"Checked"	"Confidence"	"Identifying Node Type"	"Identifying Node"	"Search ID"	"Identifying Node No"	"PSM Ambiguity"	"Sequence"	"Annotated Sequence"	"Modifications"	"# Protein Groups"	"# Proteins"	"Master Protein Accessions"	"Master Protein Descriptions"	"Protein Accessions"	"Protein Descriptions"	"# Missed Cleavages"	"Charge"	"Original Precursor Charge"	"DeltaScore"	"DeltaCn"	"Rank"	"Search Engine Rank"	"Concatenated Rank"	"m/z [Da]"	"MH+ [Da]"	"Theo. MH+ [Da]"	"DeltaM [ppm]"	"Deltam/z [Da]"	"Ions Matched"	"Matched Ions"	"Total Ions"	"Intensity"	"Activation Type"	"MS Order"	"Isolation Interference [%]"	"Average Reporter S/N"	"Ion Inject Time [ms]"	"RT [min]"	"First Scan"	"Last Scan"	"Master Scan(s)"	"Spectrum File"	"File ID"	"Abundance: 126"	"Abundance: 127N"	"Abundance: 127C"	"Abundance: 128N"	"Abundance: 128C"	"Abundance: 129N"	"Abundance: 129C"	"Abundance: 130N"	"Abundance: 130C"	"Abundance: 131"	"Quan Info"	"Peptides Matched"	"Ions Score"	"Identity Strict"	"Identity Relaxed"	"Expectation Value"	"Homology Threshold"	"Percolator q-Value"	"Percolator PEP"	"Percolator SVMScore"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSFGGR"	"[K].gGSFGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"433.73718"	"866.46709"	"866.46818"	"-1.26"	"-0.00055"	"10/48"	"10"	"48"	"1964304.85418701"	"HCD"	"MS2"	"37.09327"	"190.0"	"100.000"	"22.2235"	"3633"	"3633"	"3621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.6"	""	"207.7"	""	"212.8"	""	"397.5"	""	"400.1"	"371.2"	""	"149"	"8"	"28.000"	"21.000"	"1.13280790965071"	"13"	"0.001217"	"0.01753"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGMNVAR"	"[K].sGMNVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"482.26505"	"963.52281"	"963.52432"	"-1.56"	"-0.00075"	"9/54"	"9"	"54"	"922007.015380859"	"HCD"	"MS2"	"36.77216"	"84.8"	"100.000"	"23.4072"	"4052"	"4052"	"4045"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.3"	""	"115.5"	""	"127.9"	""	"109.9"	""	"162.5"	"166.2"	""	"338"	"6"	"32.000"	"25.000"	"4.47596523424532"	"17"	"0.003286"	"0.06846"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGMNVAR"	"[K].sGMNVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"482.26532"	"963.52336"	"963.52432"	"-0.99"	"-0.00048"	"4/54"	"4"	"54"	"952511.23059082"	"HCD"	"MS2"	"11.9678"	"91.1"	"100.000"	"23.4379"	"4098"	"4098"	"4090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.8"	""	"137.0"	""	"132.1"	""	"119.7"	""	"176.1"	"167.4"	""	"322"	"9"	"32.000"	"25.000"	"1.95805946104065"	"19"	"0.003013"	"0.05799"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFSGLR"	"[K].gVFSGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"482.79224"	"964.57720"	"964.57773"	"-0.56"	"-0.00027"	"5/48"	"5"	"48"	"14136043.6980591"	"HCD"	"MS2"	"23.61658"	"502.1"	"57.836"	"36.9023"	"9506"	"9506"	"9482"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"420.0"	""	"522.4"	""	"475.0"	""	"1026.5"	""	"1206.3"	"1138.9"	""	"111"	"16"	"27.000"	"20.000"	"0.128615403073251"	"17"	"0.002456"	"0.03623"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFSGLR"	"[K].gVFSGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"482.79254"	"964.57781"	"964.57773"	"0.08"	"0.00004"	"5/48"	"5"	"48"	"11921082.4598389"	"HCD"	"MS2"	"22.75134"	"577.9"	"79.229"	"37.0164"	"9596"	"9596"	"9574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"547.8"	""	"631.0"	""	"593.5"	""	"1146.3"	"1.9"	"1315.2"	"1264.3"	""	"111"	"10"	"27.000"	"20.000"	"0.502681593498501"	"15"	"0.003286"	"0.06835"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAHAIR"	"[R].gLAHAIR.[LM]"	"N-Term(TMT6plex)"	"3"	"3"	"P08010; P08009; Q9Z1B2"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"P08010; P08009; Q9Z1B2"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.80548"	"966.60369"	"966.60462"	"-0.96"	"-0.00046"	"6/50"	"6"	"50"	"3143087.49731445"	"HCD"	"MS2"	"7.57921"	"264.9"	"100.000"	"23.7676"	"4197"	"4197"	"4170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.1"	""	"356.2"	""	"383.9"	""	"404.2"	""	"492.4"	"496.8"	""	"39"	"14"	"22.000"	"15.000"	"0.0712909843645594"	"13"	"0.002711"	"0.04225"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAHAIR"	"[R].gLAHAIR.[LM]"	"N-Term(TMT6plex)"	"3"	"3"	"P08010; P08009; Q9Z1B2"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"P08010; P08009; Q9Z1B2"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.80563"	"966.60399"	"966.60462"	"-0.65"	"-0.00031"	"6/50"	"6"	"50"	"3104611.55358887"	"HCD"	"MS2"	"4.779825"	"226.4"	"100.000"	"23.7918"	"4240"	"4240"	"4213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"324.9"	""	"319.0"	""	"342.7"	""	"331.4"	""	"401.4"	"428.5"	""	"39"	"18"	"22.000"	"15.000"	"0.028512454901906"	"14"	"0.002393"	"0.03525"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLGLSR"	"[R].lSLGLSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1Z9"	"PDZ and LIM domain protein 7 OS=Rattus norvegicus OX=10116 GN=Pdlim7 PE=1 SV=1"	"Q9Z1Z9"	"PDZ and LIM domain protein 7 OS=Rattus norvegicus OX=10116 GN=Pdlim7 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"487.81409"	"974.62090"	"974.61960"	"1.33"	"0.00065"	"5/56"	"5"	"56"	"4386925.15240479"	"HCD"	"MS2"	"19.89531"	"287.2"	"100.000"	"40.1254"	"10870"	"10870"	"10845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.8"	""	"406.2"	""	"419.6"	""	"422.2"	"16.8"	"504.1"	"537.1"	""	"194"	"9"	"29.000"	"22.000"	"1.32975531317991"	"20"	"0.003383"	"0.07635"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITGLTM"	"[K].lITGLTM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P05508"	"NADH-ubiquinone oxidoreductase chain 4 OS=Rattus norvegicus OX=10116 GN=Mtnd4 PE=3 SV=3"	"P05508"	"NADH-ubiquinone oxidoreductase chain 4 OS=Rattus norvegicus OX=10116 GN=Mtnd4 PE=3 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"489.29828"	"977.58928"	"977.59027"	"-1.01"	"-0.00049"	"6/56"	"6"	"56"	"1000429.44494629"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"69.1099"	"22612"	"22612"	"22586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.1"	""	"43.7"	""	"34.3"	""	"37.9"	""	"58.8"	"53.3"	""	"193"	"60"	"29.000"	"22.000"	"1.05566789345257E-05"	"16"	"0.0008453"	"0.007998"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITGLTM"	"[K].lITGLTM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P05508"	"NADH-ubiquinone oxidoreductase chain 4 OS=Rattus norvegicus OX=10116 GN=Mtnd4 PE=3 SV=3"	"P05508"	"NADH-ubiquinone oxidoreductase chain 4 OS=Rattus norvegicus OX=10116 GN=Mtnd4 PE=3 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"489.29843"	"977.58959"	"977.59027"	"-0.70"	"-0.00034"	"5/56"	"5"	"56"	"783910.879882813"	"HCD"	"MS2"	"11.63035"	"23.6"	"100.000"	"69.1363"	"22674"	"22674"	"22650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.5"	""	"37.6"	""	"33.2"	""	"29.8"	"0.6"	"51.0"	"48.2"	""	"191"	"46"	"29.000"	"22.000"	"0.000220802187461769"	"16"	"0.00103"	"0.01156"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASLIEI"	"[R].lASLIEI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"494.31747"	"987.62767"	"987.62876"	"-1.11"	"-0.00055"	"6/56"	"6"	"56"	"634553.710449219"	"HCD"	"MS2"	"28.75243"	"14.8"	"100.000"	"81.6501"	"27718"	"27718"	"27696"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.5"	""	"22.4"	""	"19.3"	""	"27.5"	""	"32.0"	"25.5"	""	"200"	"43"	"30.000"	"23.000"	"0.000463446919736288"	"16"	"0.002361"	"0.03473"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASLIEI"	"[R].lASLIEI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"494.31750"	"987.62773"	"987.62876"	"-1.04"	"-0.00052"	"6/56"	"6"	"56"	"701347.399963379"	"HCD"	"MS2"	"22.89363"	"16.7"	"100.000"	"81.6382"	"27764"	"27764"	"27742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.0"	""	"22.3"	""	"24.4"	""	"32.9"	""	"31.0"	"30.0"	""	"200"	"40"	"30.000"	"23.000"	"0.0010447202192208"	"15"	"0.001999"	"0.03139"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASLIEI"	"[R].lASLIEI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"494.31772"	"987.62816"	"987.62876"	"-0.61"	"-0.00030"	"6/56"	"6"	"56"	"1071982.66650391"	"HCD"	"MS2"	"14.82379"	"18.0"	"100.000"	"81.3289"	"27638"	"27638"	"27614"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"25.0"	""	"29.1"	""	"23.4"	""	"36.0"	"36.8"	""	"200"	"44"	"30.000"	"23.000"	"0.000409260659730011"	"16"	"0.00109"	"0.01489"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASLIEI"	"[R].lASLIEI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"494.31784"	"987.62840"	"987.62876"	"-0.36"	"-0.00018"	"5/56"	"5"	"56"	"1168605.72442627"	"HCD"	"MS2"	"4.102459"	"20.0"	"100.000"	"81.3338"	"27589"	"27589"	"27568"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.2"	""	"29.9"	""	"26.1"	""	"35.4"	""	"43.1"	"33.9"	""	"200"	"39"	"30.000"	"23.000"	"0.00141253754462275"	"18"	"0.002711"	"0.04058"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAPPGGR"	"[R].iVAPPGGR.[AS]"	"N-Term(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.31314"	"995.61901"	"995.61993"	"-0.93"	"-0.00046"	"5/58"	"5"	"58"	"8080198.68847656"	"HCD"	"MS2"	"26.86551"	"491.5"	"100.000"	"29.6928"	"6565"	"6565"	"6544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"569.3"	""	"551.8"	""	"612.3"	""	"979.7"	""	"995.9"	"956.7"	""	"59"	"22"	"24.000"	"17.000"	"0.0199904244745149"	"14"	"0.0008731"	"0.008821"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSVVI"	"[R].lLQSVVI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.83325"	"1000.65923"	"1000.66040"	"-1.17"	"-0.00059"	"6/48"	"6"	"48"	"3777695.94232178"	"HCD"	"MS2"	"0.6480176"	"30.1"	"100.000"	"72.8230"	"24179"	"24179"	"24159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.6"	""	"22.2"	""	"19.6"	""	"68.8"	""	"78.4"	"78.2"	""	"141"	"58"	"28.000"	"21.000"	"1.00043555279081E-05"	"16"	"0.002981"	"0.05463"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSVVI"	"[R].lLQSVVI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.9828"	"0.0000"	"1"	"1"	"1"	"500.83340"	"1000.65953"	"1000.66040"	"-0.87"	"-0.00043"	"6/48"	"6"	"48"	"3541727.12988281"	"HCD"	"MS2"	"14.8092"	"35.3"	"100.000"	"72.5280"	"24059"	"24059"	"24031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.1"	""	"37.0"	""	"30.6"	""	"79.3"	"1.2"	"80.3"	"81.0"	""	"139"	"58"	"28.000"	"21.000"	"9.97665156180791E-06"	"17"	"0.002829"	"0.0473"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSVVI"	"[R].lLQSVVI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"500.83359"	"1000.65990"	"1000.66040"	"-0.50"	"-0.00025"	"6/48"	"6"	"48"	"3902641.28302002"	"HCD"	"MS2"	"1.600714"	"35.9"	"100.000"	"72.8337"	"24132"	"24132"	"24113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.6"	""	"31.2"	""	"28.2"	""	"81.4"	"1.2"	"87.2"	"86.9"	""	"139"	"64"	"28.000"	"21.000"	"2.77961601083963E-06"	"18"	"0.002804"	"0.04517"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSVVI"	"[R].lLQSVVI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.83371"	"1000.66014"	"1000.66040"	"-0.26"	"-0.00013"	"6/48"	"6"	"48"	"2869199.30444336"	"HCD"	"MS2"	"23.62962"	"29.9"	"100.000"	"72.5342"	"24010"	"24010"	"23985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.4"	""	"25.9"	""	"25.2"	""	"72.7"	""	"66.6"	"64.9"	""	"131"	"58"	"28.000"	"21.000"	"9.7328784569799E-06"	"16"	"0.001966"	"0.02954"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVLMSR"	"[K].gLVLMSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"502.80988"	"1004.61247"	"1004.61240"	"0.07"	"0.00004"	"5/48"	"5"	"48"	"29667368.3314209"	"HCD"	"MS2"	"9.415156"	"526.4"	"33.611"	"38.5540"	"10227"	"10227"	"10209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"754.5"	""	"748.9"	""	"791.0"	""	"617.9"	"4.7"	"977.6"	"1095.6"	""	"298"	"22"	"31.000"	"24.000"	"0.0977656446791329"	"14"	"0.002424"	"0.03569"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVLMSR"	"[K].gLVLMSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"502.80991"	"1004.61254"	"1004.61240"	"0.13"	"0.00007"	"4/48"	"4"	"48"	"22217385.7020264"	"HCD"	"MS2"	"23.82485"	"866.3"	"76.672"	"38.4130"	"10126"	"10126"	"10103"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1251.4"	""	"1267.4"	""	"1283.8"	""	"967.6"	""	"1667.2"	"1777.1"	""	"298"	"21"	"31.000"	"24.000"	"0.119175303996047"	"14"	"0.002033"	"0.03158"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGGLIR"	"[R].iFGGLIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"502.82541"	"1004.64354"	"1004.64542"	"-1.87"	"-0.00094"	"5/50"	"5"	"50"	"26034053.539978"	"HCD"	"MS2"	"0"	"674.4"	"57.473"	"53.2808"	"16229"	"16229"	"16219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"713.4"	""	"695.6"	""	"748.8"	""	"1348.9"	""	"1486.3"	"1427.3"	""	"110"	"29"	"27.000"	"20.000"	"0.00728387844357065"	"17"	"0.003286"	"0.07235"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGGLIR"	"[R].iFGGLIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"502.82553"	"1004.64379"	"1004.64542"	"-1.62"	"-0.00082"	"5/50"	"5"	"50"	"36933790.53125"	"HCD"	"MS2"	"0"	"456.6"	"26.606"	"53.0663"	"16091"	"16091"	"16087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.4"	""	"468.2"	""	"505.4"	""	"956.3"	"0.3"	"982.9"	"950.9"	""	"110"	"22"	"27.000"	"20.000"	"0.0376151406004786"	"16"	"0.003788"	"0.09118"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGGLDR"	"[R].iFGGLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"503.79758"	"1006.58788"	"1006.58830"	"-0.42"	"-0.00021"	"6/48"	"6"	"48"	"5278229.48144531"	"HCD"	"MS2"	"25.38554"	"319.5"	"100.000"	"41.8502"	"11576"	"11576"	"11554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"401.5"	""	"421.4"	""	"453.7"	""	"547.0"	""	"603.2"	"605.6"	""	"291"	"29"	"31.000"	"24.000"	"0.0186579099776451"	""	"0.004631"	"0.1352"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGGLDR"	"[R].iFGGLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"503.79785"	"1006.58843"	"1006.58830"	"0.13"	"0.00007"	"6/48"	"6"	"48"	"5837277.50982666"	"HCD"	"MS2"	"34.94156"	"369.5"	"100.000"	"41.6345"	"11444"	"11444"	"11419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"467.1"	""	"494.0"	""	"517.0"	""	"663.9"	""	"695.7"	"665.7"	""	"259"	"27"	"31.000"	"24.000"	"0.025838646978847"	""	"0.0009727"	"0.0108"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFSGLR"	"[R].lSFSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"504.80505"	"1008.60283"	"1008.60395"	"-1.11"	"-0.00056"	"5/52"	"5"	"52"	"9268125.13787842"	"HCD"	"MS2"	"13.83546"	"410.9"	"86.198"	"42.2969"	"11756"	"11756"	"11742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"608.6"	""	"606.0"	""	"652.4"	""	"551.2"	""	"671.6"	"805.4"	""	"191"	"24"	"29.000"	"22.000"	"0.0384594767780814"	"22"	"0.00103"	"0.0112"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFSGLR"	"[R].lSFSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"504.80527"	"1008.60326"	"1008.60395"	"-0.68"	"-0.00034"	"5/52"	"5"	"52"	"3718444.46032715"	"HCD"	"MS2"	"0"	"228.2"	"100.000"	"41.9781"	"11583"	"11583"	"11562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.8"	""	"336.7"	""	"355.6"	""	"325.7"	"0.9"	"390.7"	"416.0"	""	"191"	"24"	"29.000"	"22.000"	"0.0349143025990534"	"18"	"0.0008731"	"0.009276"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSIVPVR"	"[K].lSIVPVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"506.83887"	"1012.67046"	"1012.67163"	"-1.16"	"-0.00059"	"5/48"	"5"	"48"	"26560932.8081055"	"HCD"	"MS2"	"26.08146"	"603.2"	"42.480"	"41.4329"	"11406"	"11406"	"11389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"889.8"	""	"891.0"	""	"915.8"	""	"945.0"	""	"1038.6"	"1034.3"	""	"85"	"25"	"26.000"	"19.000"	"0.0147363161442326"	"15"	"0.003788"	"0.09077"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSSGAK"	"[R].gGSSGAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"511.30493"	"1021.60259"	"1021.60423"	"-1.61"	"-0.00082"	"6/50"	"6"	"50"	"652024.382629395"	"HCD"	"MS2"	"0"	"59.1"	"100.000"	"19.9594"	"2762"	"2762"	"2758"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.9"	""	"96.9"	""	"94.3"	""	"87.1"	""	"99.9"	"89.2"	""	"219"	"20"	"30.000"	"23.000"	"0.121734624137334"	""	"0.0003839"	"0.001744"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSSGAK"	"[R].gGSSGAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"511.30533"	"1021.60338"	"1021.60423"	"-0.83"	"-0.00042"	"6/50"	"6"	"50"	"657115.474182129"	"HCD"	"MS2"	"0"	"66.7"	"100.000"	"19.9961"	"2748"	"2748"	"2740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.6"	""	"106.9"	""	"117.2"	""	"96.5"	""	"115.9"	"92.2"	""	"210"	"27"	"30.000"	"23.000"	"0.0210469562873342"	""	"0.0001889"	"0.0006799"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGMAFR"	"[K].lTGMAFR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"512.79358"	"1024.57988"	"1024.58110"	"-1.19"	"-0.00061"	"5/48"	"5"	"48"	"199209026.279297"	"HCD"	"MS2"	"26.57859"	"798.7"	"7.510"	"39.8380"	"10711"	"10711"	"10693"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1289.9"	""	"1128.9"	""	"1164.4"	""	"886.2"	""	"1375.2"	"1735.1"	""	"275"	"24"	"31.000"	"24.000"	"0.054488229710123"	"14"	"0.007595"	"0.2977"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGMAFR"	"[K].lTGMAFR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"512.79358"	"1024.57988"	"1024.58110"	"-1.19"	"-0.00061"	"5/48"	"5"	"48"	"174317609.633301"	"HCD"	"MS2"	"24.2055"	"961.2"	"9.818"	"39.9522"	"10799"	"10799"	"10781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1600.1"	""	"1345.1"	""	"1401.3"	""	"1100.2"	""	"1664.0"	"2011.8"	""	"275"	"19"	"31.000"	"24.000"	"0.168384727398944"	"14"	"0.0088"	"0.3929"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGMAFR"	"[K].lTGMAFR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"512.79413"	"1024.58098"	"1024.58110"	"-0.12"	"-0.00006"	"5/48"	"5"	"48"	"11770502.5598755"	"HCD"	"MS2"	"9.259033"	"427.3"	"63.415"	"40.2667"	"10927"	"10927"	"10909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"667.2"	""	"631.6"	""	"644.5"	""	"512.9"	"17.0"	"711.1"	"860.8"	""	"285"	"24"	"31.000"	"24.000"	"0.058859269033598"	"17"	"0.00103"	"0.01278"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGMAFR"	"[K].lTGMAFR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"512.79431"	"1024.58135"	"1024.58110"	"0.24"	"0.00012"	"5/48"	"5"	"48"	"13840557.2895508"	"HCD"	"MS2"	"11.44919"	"498.3"	"63.324"	"40.1218"	"10824"	"10824"	"10805"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"809.2"	""	"713.1"	""	"736.3"	""	"585.1"	"6.9"	"849.7"	"1017.6"	""	"270"	"27"	"31.000"	"24.000"	"0.0246225919813151"	"16"	"0.001217"	"0.0186"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLHSLR"	"[K].lGLHSLR.[HQ]"	"N-Term(TMT6plex)"	"1"	"3"	"P84079"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"512.82690"	"1024.64653"	"1024.64648"	"0.05"	"0.00003"	"9/48"	"9"	"48"	"11757778.7564697"	"HCD"	"MS2"	"19.36918"	"704.4"	"100.000"	"29.9274"	"6702"	"6702"	"6681"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"923.7"	""	"936.4"	""	"998.2"	""	"1177.1"	"4.2"	"1355.0"	"1283.0"	""	"100"	"9"	"26.000"	"20.000"	"0.59288437408358"	"14"	"0.003286"	"0.07019"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLNLLIR"	"[R].gLNLLIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"514.34491"	"1027.68254"	"1027.68253"	"0.01"	"0.00001"	"5/58"	"5"	"58"	"3296095.30358887"	"HCD"	"MS2"	"49.56022"	"174.7"	"100.000"	"48.3457"	"14218"	"14218"	"14197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.8"	""	"261.8"	""	"263.2"	""	"263.7"	""	"305.3"	"309.8"	""	"103"	"15"	"27.000"	"20.000"	"0.15988481878861"	"17"	"0.00286"	"0.0491"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLFAPVR"	"[R].vLFAPVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"515.83331"	"1030.65935"	"1030.66107"	"-1.67"	"-0.00086"	"5/50"	"5"	"50"	"9384029.32403564"	"HCD"	"MS2"	"34.50319"	"447.4"	"100.000"	"43.3467"	"12183"	"12183"	"12166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"639.5"	""	"618.7"	""	"684.3"	""	"683.1"	"3.5"	"788.9"	"818.2"	""	"260"	"31"	"31.000"	"24.000"	"0.0112705043848568"	"18"	"0.003507"	"0.07915"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLFAPVR"	"[R].vLFAPVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"515.83368"	"1030.66008"	"1030.66107"	"-0.96"	"-0.00049"	"9/50"	"9"	"50"	"25822183.7910156"	"HCD"	"MS2"	"11.5478"	"630.4"	"58.991"	"43.2155"	"12079"	"12079"	"12064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"917.0"	""	"884.4"	""	"980.8"	""	"946.9"	""	"1145.4"	"1099.1"	""	"260"	"32"	"31.000"	"24.000"	"0.00777935073578416"	"18"	"0.004346"	"0.1243"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAILGYR"	"[K].iAILGYR.[SR]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"517.83148"	"1034.65569"	"1034.65598"	"-0.28"	"-0.00015"	"5/50"	"5"	"50"	"6587655.1307373"	"HCD"	"MS2"	"10.72062"	"295.0"	"100.000"	"47.2253"	"13712"	"13712"	"13688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.7"	"3.6"	"430.1"	""	"464.0"	""	"485.8"	""	"533.5"	"497.5"	""	"106"	"12"	"27.000"	"20.000"	"0.370063174160901"	"13"	"0.001587"	"0.02149"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAILGYR"	"[K].lAILGYR.[SR]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"O88563"	"Canalicular multispecific organic anion transporter 2 OS=Rattus norvegicus OX=10116 GN=Abcc3 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"517.83148"	"1034.65569"	"1034.65598"	"-0.28"	"-0.00015"	"5/50"	"5"	"50"	"6587655.1307373"	"HCD"	"MS2"	"10.72062"	"295.0"	"100.000"	"47.2253"	"13712"	"13712"	"13688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.7"	"3.6"	"430.1"	""	"464.0"	""	"485.8"	""	"533.5"	"497.5"	""	"106"	"12"	"27.000"	"20.000"	"0.370063174160901"	"13"	"0.001587"	"0.02149"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAILGYR"	"[K].iAILGYR.[SR]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"517.83160"	"1034.65593"	"1034.65598"	"-0.05"	"-0.00003"	"4/50"	"4"	"50"	"6975880.03582764"	"HCD"	"MS2"	"15.06445"	"303.2"	"100.000"	"47.4756"	"13862"	"13862"	"13842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.0"	""	"436.8"	""	"445.6"	""	"481.1"	""	"553.4"	"542.1"	""	"106"	"16"	"27.000"	"20.000"	"0.121415985596692"	"14"	"0.002099"	"0.03203"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAILGYR"	"[K].lAILGYR.[SR]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"O88563"	"Canalicular multispecific organic anion transporter 2 OS=Rattus norvegicus OX=10116 GN=Abcc3 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"517.83160"	"1034.65593"	"1034.65598"	"-0.05"	"-0.00003"	"4/50"	"4"	"50"	"6975880.03582764"	"HCD"	"MS2"	"15.06445"	"303.2"	"100.000"	"47.4756"	"13862"	"13862"	"13842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.0"	""	"436.8"	""	"445.6"	""	"481.1"	""	"553.4"	"542.1"	""	"106"	"16"	"27.000"	"20.000"	"0.121415985596692"	"14"	"0.002099"	"0.03203"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"518.29266"	"1035.57805"	"1035.57846"	"-0.40"	"-0.00020"	"6/66"	"6"	"66"	"8347324.2923584"	"HCD"	"MS2"	"30.5955"	"441.9"	"87.648"	"34.7284"	"8657"	"8657"	"8634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"660.1"	""	"602.3"	""	"633.6"	""	"675.4"	"7.3"	"801.5"	"805.4"	""	"432"	"24"	"33.000"	"26.000"	"0.0861893789102227"	"15"	"0.000494"	"0.002659"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"518.29285"	"1035.57842"	"1035.57846"	"-0.04"	"-0.00002"	"6/66"	"6"	"66"	"9694616.27740479"	"HCD"	"MS2"	"33.39552"	"372.1"	"63.756"	"34.6505"	"8582"	"8582"	"8563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"563.6"	""	"519.6"	""	"527.8"	""	"566.0"	"3.6"	"668.6"	"674.6"	""	"431"	"23"	"33.000"	"26.000"	"0.111801408389191"	"14"	"0.001058"	"0.01431"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGVFSGR"	"[R].wGVFSGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"519.28961"	"1037.57195"	"1037.57298"	"-1.00"	"-0.00052"	"6/48"	"6"	"48"	"21292563.1092529"	"HCD"	"MS2"	"0"	"774.8"	"72.477"	"43.1818"	"12118"	"12118"	"12105"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"686.8"	""	"907.6"	""	"802.9"	""	"1396.2"	""	"1696.6"	"1886.0"	""	"351"	"18"	"32.000"	"25.000"	"0.249044595056436"	"21"	"0.003137"	"0.06364"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGVFSGR"	"[R].wGVFSGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"519.28973"	"1037.57219"	"1037.57298"	"-0.76"	"-0.00039"	"6/48"	"6"	"48"	"17668317.4480591"	"HCD"	"MS2"	"7.592696"	"913.2"	"100.000"	"42.9440"	"11976"	"11976"	"11966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"800.2"	""	"1099.2"	""	"938.2"	""	"1608.8"	""	"2022.6"	"2232.3"	""	"337"	"19"	"32.000"	"25.000"	"0.213108074548889"	"22"	"0.002953"	"0.05223"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVNLLR"	"[R].vPVNLLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"520.34448"	"1039.68169"	"1039.68253"	"-0.81"	"-0.00042"	"6/56"	"6"	"56"	"15032707.1652222"	"HCD"	"MS2"	"0"	"454.1"	"100.000"	"43.5828"	"12277"	"12277"	"12258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"584.7"	""	"570.0"	""	"618.2"	""	"798.2"	"0.5"	"858.0"	"876.2"	""	"48"	"19"	"23.000"	"16.000"	"0.0309179892406352"	"15"	"0.002393"	"0.03548"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVNLLR"	"[R].vPVNLLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"520.34497"	"1039.68266"	"1039.68253"	"0.13"	"0.00007"	"6/56"	"6"	"56"	"14342203.1959229"	"HCD"	"MS2"	"0"	"452.3"	"100.000"	"43.3415"	"12130"	"12130"	"12117"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"577.0"	""	"562.6"	""	"624.3"	""	"787.7"	"2.3"	"854.3"	"881.0"	""	"48"	"19"	"23.000"	"16.000"	"0.0290543552052116"	"15"	"0.003286"	"0.07341"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDSLNR"	"[K].tIDSLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"524.30267"	"1047.59807"	"1047.59959"	"-1.45"	"-0.00076"	"4/56"	"4"	"56"	"4989386.9487915"	"HCD"	"MS2"	"20.92107"	"320.1"	"100.000"	"29.1616"	"6390"	"6390"	"6382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"451.3"	""	"407.7"	""	"433.2"	""	"558.3"	"1.9"	"597.3"	"583.7"	""	"654"	"20"	"35.000"	"28.000"	"0.348776931642294"	"26"	"0.0008453"	"0.00806"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDSLNR"	"[K].tIDSLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"524.30280"	"1047.59831"	"1047.59959"	"-1.22"	"-0.00064"	"4/56"	"4"	"56"	"4187169.29748535"	"HCD"	"MS2"	"14.30272"	"267.3"	"100.000"	"29.0603"	"6308"	"6308"	"6302"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"381.3"	""	"372.2"	""	"370.2"	""	"442.7"	"3.7"	"461.6"	"499.9"	""	"654"	"20"	"35.000"	"28.000"	"0.314447215031458"	"24"	"0.0006037"	"0.004667"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFAGVVR"	"[K].lGFAGVVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"524.32898"	"1047.65068"	"1047.65123"	"-0.52"	"-0.00027"	"11/58"	"11"	"58"	"6455294.48352051"	"HCD"	"MS2"	"12.34808"	"331.8"	"100.000"	"42.4000"	"11798"	"11798"	"11779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.3"	""	"409.7"	""	"436.3"	""	"583.6"	"7.6"	"641.2"	"655.6"	""	"244"	"26"	"30.000"	"23.000"	"0.0337566880740205"	"21"	"0.001058"	"0.01435"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFAGVVR"	"[K].lGFAGVVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"524.32904"	"1047.65080"	"1047.65123"	"-0.41"	"-0.00021"	"7/58"	"7"	"58"	"6736410.00445557"	"HCD"	"MS2"	"0"	"333.8"	"100.000"	"42.1751"	"11662"	"11662"	"11644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.7"	""	"433.4"	""	"430.1"	""	"558.0"	"1.7"	"666.7"	"645.9"	""	"244"	"23"	"30.000"	"23.000"	"0.0608639074701215"	"21"	"0.0004166"	"0.002261"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTIFIR"	"[R].aVTIFIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"524.83875"	"1048.67021"	"1048.67163"	"-1.35"	"-0.00071"	"5/48"	"5"	"48"	"4602521.86499023"	"HCD"	"MS2"	"0"	"239.2"	"100.000"	"45.4249"	"12979"	"12979"	"12967"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"317.6"	""	"360.3"	""	"374.2"	""	"388.4"	"0.8"	"418.1"	"405.0"	""	"131"	"21"	"28.000"	"21.000"	"0.0581087187884865"	"14"	"0.001587"	"0.02181"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTIFIR"	"[R].aVTIFIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"524.83911"	"1048.67095"	"1048.67163"	"-0.65"	"-0.00034"	"5/48"	"5"	"48"	"4827209.1864624"	"HCD"	"MS2"	"0"	"249.8"	"100.000"	"45.6753"	"13131"	"13131"	"13111"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.0"	""	"366.7"	""	"399.0"	""	"425.8"	""	"436.0"	"428.1"	""	"119"	"22"	"27.000"	"20.000"	"0.0405057768422776"	"15"	"0.001058"	"0.01462"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILMMGR"	"[R].tILMMGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"525.80383"	"1050.60039"	"1050.60012"	"0.25"	"0.00013"	"4/48"	"4"	"48"	"26746879.618042"	"HCD"	"MS2"	"16.52827"	"1334.2"	"100.000"	"40.7108"	"11065"	"11065"	"11045"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2222.0"	""	"2037.9"	""	"2151.9"	""	"1413.7"	"11.5"	"2318.0"	"2469.2"	""	"431"	"18"	"33.000"	"26.000"	"0.305103559580751"	"24"	"0.002099"	"0.03173"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILMMGR"	"[R].tILMMGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"525.80402"	"1050.60076"	"1050.60012"	"0.60"	"0.00032"	"4/48"	"4"	"48"	"28271292.2805176"	"HCD"	"MS2"	"19.47529"	"1026.7"	"76.117"	"40.8548"	"11168"	"11168"	"11149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1764.8"	""	"1559.1"	""	"1642.2"	""	"1097.3"	"11.6"	"1758.9"	"1878.7"	""	"433"	"21"	"33.000"	"26.000"	"0.18132508958047"	""	"0.002165"	"0.03252"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGYIR"	"[R].dLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"526.80011"	"1052.59294"	"1052.59378"	"-0.79"	"-0.00042"	"9/52"	"9"	"52"	"34378818.5692749"	"HCD"	"MS2"	"34.35451"	"1139.4"	"61.736"	"38.1061"	"10000"	"10000"	"9975"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1376.7"	""	"1430.4"	""	"1424.0"	""	"1987.1"	""	"2239.1"	"2368.4"	""	"341"	"22"	"32.000"	"25.000"	"0.0992485986299336"	""	"0.001966"	"0.02876"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGYIR"	"[R].dLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"526.80017"	"1052.59307"	"1052.59378"	"-0.67"	"-0.00036"	"9/52"	"9"	"52"	"43703882.0350342"	"HCD"	"MS2"	"21.67415"	"826.6"	"36.874"	"38.2087"	"10085"	"10085"	"10065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1013.3"	""	"995.3"	""	"1025.6"	""	"1458.3"	""	"1625.5"	"1736.9"	""	"335"	"22"	"32.000"	"25.000"	"0.0944093073508473"	""	"0.002953"	"0.05354"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSLATMR"	"[R].fSLATMR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.79852"	"1054.58977"	"1054.59167"	"-1.80"	"-0.00095"	"5/54"	"5"	"54"	"16846152.3944092"	"HCD"	"MS2"	"5.502466"	"357.0"	"37.024"	"41.7766"	"11502"	"11502"	"11483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"527.2"	""	"502.2"	""	"523.3"	""	"442.6"	""	"639.8"	"757.7"	""	"268"	"30"	"31.000"	"24.000"	"0.0150350472876463"	"14"	"0.003571"	"0.08284"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSGGVFR"	"[R].fGSGGVFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"528.29474"	"1055.58220"	"1055.58355"	"-1.27"	"-0.00067"	"7/56"	"7"	"56"	"7413198.1194458"	"HCD"	"MS2"	"32.4746"	"475.1"	"100.000"	"37.9514"	"9980"	"9980"	"9953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"522.3"	""	"588.9"	""	"596.8"	""	"1027.2"	""	"887.6"	"886.2"	""	"241"	"18"	"30.000"	"23.000"	"0.193636420988052"	"14"	"0.003107"	"0.06153"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSGGVFR"	"[R].fGSGGVFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"528.29510"	"1055.58293"	"1055.58355"	"-0.58"	"-0.00031"	"11/56"	"11"	"56"	"7380795.23150635"	"HCD"	"MS2"	"30.77363"	"473.5"	"100.000"	"37.8744"	"9905"	"9905"	"9879"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"536.0"	""	"580.7"	""	"618.4"	""	"1016.5"	"4.3"	"907.7"	"825.7"	""	"239"	"15"	"30.000"	"23.000"	"0.360884230588041"	"16"	"0.002829"	"0.04656"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLVLAGR"	"[K].vVLVLAGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"528.35980"	"1055.71233"	"1055.71383"	"-1.42"	"-0.00075"	"5/58"	"5"	"58"	"10535462.7434692"	"HCD"	"MS2"	"20.82952"	"432.2"	"100.000"	"46.2088"	"13296"	"13296"	"13272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"553.4"	""	"639.2"	""	"663.8"	""	"676.0"	""	"772.7"	"789.3"	""	"74"	"25"	"25.000"	"18.000"	"0.0108943600450554"	""	"0.0006037"	"0.005244"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLVLAGR"	"[K].vVLVLAGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"528.35980"	"1055.71233"	"1055.71383"	"-1.42"	"-0.00075"	"5/58"	"5"	"58"	"11392393.6699829"	"HCD"	"MS2"	"5.274013"	"451.9"	"100.000"	"46.4728"	"13452"	"13452"	"13429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"576.7"	""	"683.7"	""	"708.7"	""	"676.8"	""	"813.5"	"822.9"	""	"74"	"24"	"25.000"	"18.000"	"0.0146622872674513"	""	"0.0006037"	"0.006153"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FYALSAR"	"[R].fYALSAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"528.80511"	"1056.60295"	"1056.60395"	"-0.94"	"-0.00050"	"4/48"	"4"	"48"	"55268161.8577881"	"HCD"	"MS2"	"20.72461"	"1075.4"	"41.021"	"38.8689"	"10313"	"10313"	"10294"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1588.1"	""	"1508.8"	""	"1660.7"	""	"1785.1"	""	"1756.9"	"1880.1"	""	"295"	"24"	"31.000"	"24.000"	"0.0612057212885685"	""	"0.003286"	"0.07071"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVHFLGR"	"[K].vVHFLGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O08730"	"Glycogenin-1 OS=Rattus norvegicus OX=10116 GN=Gyg1 PE=2 SV=4"	"O08730"	"Glycogenin-1 OS=Rattus norvegicus OX=10116 GN=Gyg1 PE=2 SV=4"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"352.88803"	"1056.64954"	"1056.65157"	"-1.92"	"-0.00068"	"6/50"	"6"	"50"	"17639721.4474487"	"HCD"	"MS2"	"5.635845"	"224.8"	"100.000"	"33.8434"	"8255"	"8255"	"8234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"282.5"	""	"308.4"	""	"349.2"	""	"373.5"	""	"409.5"	"410.4"	""	"239"	"27"	"30.000"	"23.000"	"0.0247952165335862"	"19"	"0.0006037"	"0.00532"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVHFLGR"	"[K].vVHFLGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O08730"	"Glycogenin-1 OS=Rattus norvegicus OX=10116 GN=Gyg1 PE=2 SV=4"	"O08730"	"Glycogenin-1 OS=Rattus norvegicus OX=10116 GN=Gyg1 PE=2 SV=4"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"352.88834"	"1056.65046"	"1056.65157"	"-1.05"	"-0.00037"	"6/50"	"6"	"50"	"17202413.2450562"	"HCD"	"MS2"	"3.05431"	"220.1"	"100.000"	"33.9076"	"8325"	"8325"	"8298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.5"	""	"299.8"	""	"329.1"	""	"367.3"	""	"391.5"	"414.7"	""	"233"	"25"	"30.000"	"23.000"	"0.0405812972016954"	"16"	"0.0006037"	"0.005382"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVIDVIR"	"[K].lVIDVIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1M9"	"Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1"	"Q9Z1M9"	"Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"528.85217"	"1056.69707"	"1056.69785"	"-0.74"	"-0.00039"	"8/48"	"8"	"48"	"7446279.81134033"	"HCD"	"MS2"	"6.633039"	"294.3"	"100.000"	"51.0190"	"15254"	"15254"	"15234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"393.0"	""	"414.9"	""	"439.3"	""	"481.8"	""	"536.4"	"524.6"	""	"148"	"22"	"28.000"	"21.000"	"0.047340377825716"	""	"0.001846"	"0.0258"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVIDVIR"	"[K].lVIDVIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1M9"	"Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1"	"Q9Z1M9"	"Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"528.85229"	"1056.69731"	"1056.69785"	"-0.50"	"-0.00027"	"8/48"	"8"	"48"	"8578103.30432129"	"HCD"	"MS2"	"8.799057"	"333.3"	"100.000"	"51.2098"	"15383"	"15383"	"15366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"458.1"	""	"463.3"	""	"500.1"	""	"560.7"	"1.4"	"594.3"	"578.1"	""	"148"	"21"	"28.000"	"21.000"	"0.0611268082687113"	""	"0.001422"	"0.01934"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"529.82300"	"1058.63872"	"1058.64073"	"-1.90"	"-0.00100"	"5/54"	"5"	"54"	"5602666.35339355"	"HCD"	"MS2"	"16.37798"	"266.7"	"100.000"	"45.7921"	"13176"	"13176"	"13160"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"387.6"	""	"366.4"	""	"400.3"	""	"396.6"	"0.8"	"467.9"	"505.9"	""	"487"	"35"	"33.000"	"26.000"	"0.00703880551355994"	""	"0.0006037"	"0.005014"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"529.82361"	"1058.63994"	"1058.64073"	"-0.74"	"-0.00039"	"5/54"	"5"	"54"	"5471126.09637451"	"HCD"	"MS2"	"0"	"276.6"	"100.000"	"45.5578"	"13030"	"13030"	"13020"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"376.8"	""	"385.0"	""	"415.4"	""	"428.0"	"1.9"	"494.0"	"518.7"	""	"487"	"35"	"33.000"	"26.000"	"0.00703880551355994"	""	"0.000494"	"0.002703"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLFIPR"	"[R].aLLFIPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"529.84918"	"1058.69109"	"1058.69237"	"-1.21"	"-0.00064"	"4/50"	"4"	"50"	"8357436.93859863"	"HCD"	"MS2"	"0"	"312.1"	"92.903"	"54.7347"	"16753"	"16753"	"16736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"469.0"	""	"415.7"	""	"475.1"	""	"485.6"	"6.4"	"539.2"	"563.1"	""	"240"	"19"	"30.000"	"23.000"	"0.142949040963285"	"21"	"0.001217"	"0.01859"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLFIPR"	"[R].aLLFIPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"529.84930"	"1058.69133"	"1058.69237"	"-0.98"	"-0.00052"	"4/50"	"4"	"50"	"19604180.713623"	"HCD"	"MS2"	"29.11471"	"720.8"	"94.080"	"54.1441"	"16511"	"16511"	"16493"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1131.5"	""	"1007.5"	""	"1068.4"	""	"1156.0"	""	"1218.8"	"1240.4"	""	"240"	"19"	"30.000"	"23.000"	"0.147292707739009"	"21"	"0.003197"	"0.06533"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLFIPR"	"[R].aLLFIPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"529.84937"	"1058.69145"	"1058.69237"	"-0.86"	"-0.00046"	"4/50"	"4"	"50"	"6781944.76300049"	"HCD"	"MS2"	"2.738809"	"291.1"	"100.000"	"54.9727"	"16903"	"16903"	"16885"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"444.9"	""	"386.7"	""	"432.7"	""	"450.0"	"1.7"	"494.8"	"544.3"	""	"240"	"17"	"30.000"	"23.000"	"0.214872702484235"	"21"	"0.001686"	"0.02328"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLFIPR"	"[R].aLLFIPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"529.84961"	"1058.69194"	"1058.69237"	"-0.40"	"-0.00021"	"4/50"	"4"	"50"	"21243143.3219604"	"HCD"	"MS2"	"29.15645"	"731.1"	"83.499"	"54.3618"	"16653"	"16653"	"16637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1140.0"	""	"1003.8"	""	"1123.1"	""	"1162.0"	""	"1217.8"	"1270.1"	""	"236"	"19"	"30.000"	"23.000"	"0.147530565565691"	"21"	"0.002651"	"0.03972"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLFIPR"	"[R].aLLFIPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"529.84991"	"1058.69255"	"1058.69237"	"0.17"	"0.00009"	"4/50"	"4"	"50"	"107441196.873047"	"HCD"	"MS2"	"0.2925487"	"513.6"	"13.128"	"54.6559"	"16774"	"16774"	"16757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"792.2"	"3.2"	"667.3"	""	"825.0"	""	"816.9"	""	"838.0"	"921.2"	""	"290"	"20"	"31.000"	"24.000"	"0.160460448676762"	"23"	"0.007472"	"0.2871"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALFLIPR"	"[R].aLFLIPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LP90"	"Misshapen-like kinase 1 OS=Rattus norvegicus OX=10116 GN=Mink1 PE=1 SV=2"	"F1LP90"	"Misshapen-like kinase 1 OS=Rattus norvegicus OX=10116 GN=Mink1 PE=1 SV=2"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"529.85004"	"1058.69280"	"1058.69237"	"0.41"	"0.00021"	"5/50"	"5"	"50"	"3813355.47186279"	"HCD"	"MS2"	"9.22128"	"170.3"	"100.000"	"55.8661"	"17215"	"17215"	"17195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.1"	""	"245.5"	""	"241.3"	""	"291.1"	""	"312.1"	"304.1"	""	"290"	"18"	"31.000"	"24.000"	"0.212504436938607"	""	"0.0008125"	"0.007636"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFSLLR"	"[R].vPFSLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"530.83911"	"1060.67095"	"1060.67163"	"-0.65"	"-0.00034"	"7/48"	"7"	"48"	"8633336.56634521"	"HCD"	"MS2"	"20.47816"	"268.5"	"100.000"	"54.8522"	"16800"	"16800"	"16780"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"350.1"	""	"395.7"	""	"405.2"	""	"431.2"	""	"489.0"	"472.2"	""	"331"	"10"	"32.000"	"25.000"	"1.55882728224531"	"19"	"0.00103"	"0.01296"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFSLLR"	"[R].vPFSLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"530.83917"	"1060.67107"	"1060.67163"	"-0.53"	"-0.00028"	"7/48"	"7"	"48"	"8045925.1786499"	"HCD"	"MS2"	"8.070787"	"263.8"	"100.000"	"55.3335"	"17051"	"17051"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"337.9"	""	"398.1"	""	"414.2"	""	"396.2"	""	"486.5"	"470.5"	""	"319"	"16"	"32.000"	"25.000"	"0.445410742677356"	"22"	"0.001217"	"0.01699"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFSLLR"	"[R].vPFSLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"530.83923"	"1060.67119"	"1060.67163"	"-0.42"	"-0.00022"	"7/48"	"7"	"48"	"7156829.71502686"	"HCD"	"MS2"	"2.654745"	"237.0"	"100.000"	"55.1689"	"16930"	"16930"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"295.2"	""	"353.5"	""	"368.1"	""	"352.7"	""	"434.1"	"446.4"	""	"319"	"15"	"32.000"	"25.000"	"0.522108408331747"	"21"	"0.0008731"	"0.008993"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFSLLR"	"[R].vPFSLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"530.83936"	"1060.67143"	"1060.67163"	"-0.19"	"-0.00010"	"10/48"	"10"	"48"	"8499878.29766846"	"HCD"	"MS2"	"19.28365"	"281.6"	"100.000"	"55.0141"	"16920"	"16920"	"16901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.3"	""	"441.9"	""	"425.8"	""	"435.5"	""	"499.7"	"498.3"	""	"319"	"9"	"32.000"	"25.000"	"1.91320138852326"	"19"	"0.001058"	"0.01327"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGFAIVR"	"[K].gIGFAIVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"531.33698"	"1061.66667"	"1061.66688"	"-0.20"	"-0.00010"	"12/58"	"12"	"58"	"9221370.91149902"	"HCD"	"MS2"	"17.81448"	"447.8"	"100.000"	"44.9883"	"12850"	"12850"	"12827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"663.6"	""	"691.5"	""	"741.1"	""	"637.0"	"5.8"	"716.3"	"779.6"	""	"226"	"25"	"30.000"	"23.000"	"0.0387327598797489"	"17"	"0.000523"	"0.002783"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGFAIVR"	"[K].gIGFAIVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"531.33722"	"1061.66716"	"1061.66688"	"0.26"	"0.00014"	"7/58"	"7"	"58"	"9080791.51300049"	"HCD"	"MS2"	"26.54909"	"440.9"	"100.000"	"44.7656"	"12710"	"12710"	"12688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"652.9"	""	"723.8"	""	"710.6"	""	"626.1"	"5.1"	"714.1"	"736.3"	""	"240"	"24"	"30.000"	"23.000"	"0.0485491070036931"	"17"	"0.000494"	"0.002661"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGAAAK"	"[R].sVGAAAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"531.33917"	"1061.67107"	"1061.67192"	"-0.80"	"-0.00042"	"4/48"	"4"	"48"	"1662839.17376709"	"HCD"	"MS2"	"0"	"138.5"	"100.000"	"25.4481"	"4917"	"4917"	"4898"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.2"	""	"197.5"	""	"188.8"	""	"230.1"	"4.1"	"232.2"	"243.9"	""	"229"	"16"	"30.000"	"23.000"	"0.273404391893559"	"21"	"0.0004557"	"0.0026"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPYSVVR"	"[R].lPYSVVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"531.82874"	"1062.65019"	"1062.65090"	"-0.66"	"-0.00035"	"6/48"	"6"	"48"	"14662714.8375244"	"HCD"	"MS2"	"15.79393"	"420.6"	"53.023"	"39.1317"	"10464"	"10464"	"10446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"662.4"	""	"621.2"	""	"588.5"	""	"647.7"	""	"694.7"	"768.3"	""	"377"	"15"	"32.000"	"25.000"	"0.570573181197096"	"17"	"0.001217"	"0.01869"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLQHLR"	"[K].lGLQHLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"355.89542"	"1065.67170"	"1065.67303"	"-1.25"	"-0.00044"	"6/56"	"6"	"56"	"5636470.44311523"	"HCD"	"MS2"	"4.30221"	"152.9"	"100.000"	"29.8425"	"6667"	"6667"	"6650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.8"	""	"228.3"	""	"247.2"	""	"251.7"	"1.4"	"282.8"	"231.9"	""	"96"	"27"	"26.000"	"19.000"	"0.00980034213441375"	"14"	"0.00103"	"0.01299"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLQHLR"	"[K].lGLQHLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"355.89554"	"1065.67206"	"1065.67303"	"-0.91"	"-0.00032"	"8/56"	"8"	"56"	"5434039.18023682"	"HCD"	"MS2"	"6.750202"	"148.5"	"100.000"	"29.7915"	"6605"	"6605"	"6586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.0"	""	"211.1"	""	"240.1"	""	"240.5"	"2.8"	"257.6"	"237.6"	""	"56"	"21"	"24.000"	"17.000"	"0.0200520154859613"	"17"	"0.002132"	"0.03212"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHISPDR"	"[R].lHISPDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"3"	"3"	"0.1000"	"0.0000"	"1"	"1"	"1"	"356.21133"	"1066.61945"	"1066.62066"	"-1.13"	"-0.00040"	"5/52"	"5"	"52"	"5078435.30780029"	"HCD"	"MS2"	"43.7932"	"229.2"	"100.000"	"26.4631"	"5292"	"5292"	"5265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.5"	""	"312.7"	""	"328.6"	""	"380.5"	"1.0"	"423.7"	"422.8"	""	"342"	"10"	"32.000"	"25.000"	"1.63680186191418"	"22"	"0.002651"	"0.03917"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHISPDR"	"[R].lHISPDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"356.21136"	"1066.61954"	"1066.62066"	"-1.05"	"-0.00037"	"5/52"	"5"	"52"	"5062504.9944458"	"HCD"	"MS2"	"44.11727"	"234.5"	"100.000"	"26.5444"	"5362"	"5362"	"5333"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.5"	""	"322.0"	""	"354.8"	""	"389.5"	"0.8"	"427.4"	"438.1"	""	"283"	"12"	"31.000"	"24.000"	"0.952261968642309"	"23"	"0.003788"	"0.09033"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVAEGHR"	"[R].gLVAEGHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.31091"	"1067.61455"	"1067.61591"	"-1.27"	"-0.00068"	"7/56"	"7"	"56"	"491867.850036621"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"22.0046"	"3511"	"3511"	"3485"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.0"	""	"53.7"	""	"46.9"	""	"55.1"	""	"66.5"	"63.7"	""	"289"	"21"	"31.000"	"24.000"	"0.107613770229415"	"14"	"0.0006037"	"0.005759"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPQLILR"	"[K].vPQLILR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"534.35980"	"1067.71233"	"1067.71383"	"-1.41"	"-0.00075"	"6/58"	"6"	"58"	"15018379.8449097"	"HCD"	"MS2"	"0"	"335.4"	"67.142"	"46.1973"	"13291"	"13291"	"13272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"364.3"	""	"443.8"	""	"496.4"	""	"580.5"	""	"651.2"	"647.8"	""	"33"	"17"	"22.000"	"15.000"	"0.0336886760870473"	""	"0.005353"	"0.1669"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPQLILR"	"[K].vPQLILR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"534.36011"	"1067.71294"	"1067.71383"	"-0.84"	"-0.00045"	"10/58"	"10"	"58"	"14222743.90802"	"HCD"	"MS2"	"0"	"463.8"	"100.000"	"46.4660"	"13449"	"13449"	"13429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"490.3"	""	"616.3"	""	"694.9"	""	"783.0"	""	"897.9"	"921.3"	""	"33"	"19"	"22.000"	"15.000"	"0.0216015017294902"	""	"0.002829"	"0.04844"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPQLILR"	"[K].vPQLILR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"534.36023"	"1067.71318"	"1067.71383"	"-0.61"	"-0.00032"	"5/58"	"5"	"58"	"19872443.5567627"	"HCD"	"MS2"	"3.620615"	"396.4"	"52.402"	"46.5068"	"13418"	"13418"	"13400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.8"	""	"544.9"	""	"589.1"	""	"661.9"	""	"750.5"	"784.2"	""	"33"	"17"	"22.000"	"15.000"	"0.0352763744767868"	""	"0.005855"	"0.1906"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPQLILR"	"[K].vPQLILR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"534.36023"	"1067.71318"	"1067.71383"	"-0.61"	"-0.00032"	"9/58"	"9"	"58"	"21056402.6385498"	"HCD"	"MS2"	"5.737587"	"376.6"	"49.632"	"46.7689"	"13573"	"13573"	"13554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"418.9"	""	"506.6"	""	"555.6"	""	"652.2"	""	"707.7"	"734.4"	""	"33"	"19"	"22.000"	"15.000"	"0.0192523586815059"	""	"0.006001"	"0.2037"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQLLVR"	"[R].lVQLLVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3056"	"0.0000"	"1"	"1"	"1"	"535.36731"	"1069.72734"	"1069.72948"	"-2.00"	"-0.00107"	"6/58"	"6"	"58"	"6740542.14178467"	"HCD"	"MS2"	"15.13923"	"294.0"	"100.000"	"53.9129"	"16472"	"16472"	"16457"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"382.2"	""	"443.9"	""	"425.3"	""	"434.8"	"3.4"	"516.5"	"579.5"	""	"35"	"37"	"22.000"	"15.000"	"0.00039177619924946"	""	"0.002953"	"0.05287"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQLLVR"	"[R].lVQLLVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3659"	"0.0000"	"1"	"1"	"1"	"535.36792"	"1069.72856"	"1069.72948"	"-0.86"	"-0.00046"	"6/58"	"6"	"58"	"5206470.54925537"	"HCD"	"MS2"	"0"	"233.9"	"100.000"	"53.6448"	"16311"	"16311"	"16301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"292.7"	""	"364.0"	""	"327.7"	""	"345.8"	"3.5"	"417.1"	"465.8"	""	"35"	"41"	"22.000"	"15.000"	"0.000154183552776403"	""	"0.001058"	"0.01377"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLLQR"	"[K].iVVLLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"535.36816"	"1069.72905"	"1069.72948"	"-0.40"	"-0.00021"	"6/52"	"6"	"52"	"10118955.748291"	"HCD"	"MS2"	"10.54484"	"397.9"	"100.000"	"48.7945"	"14354"	"14354"	"14335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"532.2"	""	"565.9"	""	"630.1"	""	"621.7"	""	"666.1"	"752.3"	""	"35"	"41"	"22.000"	"15.000"	"0.000153475143700136"	""	"0.0009404"	"0.009906"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLLQR"	"[K].iVVLLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.36823"	"1069.72917"	"1069.72948"	"-0.29"	"-0.00015"	"6/52"	"6"	"52"	"9966274.74902344"	"HCD"	"MS2"	"14.20012"	"393.7"	"100.000"	"49.0399"	"14502"	"14502"	"14479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"516.6"	""	"571.3"	""	"620.5"	""	"595.6"	""	"665.2"	"760.4"	""	"35"	"26"	"22.000"	"15.000"	"0.00450856202475451"	"14"	"0.002829"	"0.04695"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSLLQR"	"[K].lLSLLQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"536.35742"	"1071.70757"	"1071.70875"	"-1.10"	"-0.00059"	"6/50"	"6"	"50"	"9221068.86572266"	"HCD"	"MS2"	"9.842548"	"330.6"	"100.000"	"59.2145"	"18632"	"18632"	"18613"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"519.1"	""	"498.0"	""	"494.1"	""	"524.3"	""	"526.9"	"568.8"	""	"185"	"39"	"29.000"	"22.000"	"0.00120265685968079"	""	"0.0006037"	"0.00595"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSLLQR"	"[K].lLSLLQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"536.35773"	"1071.70818"	"1071.70875"	"-0.53"	"-0.00028"	"6/50"	"6"	"50"	"8240581.68365479"	"HCD"	"MS2"	"12.83844"	"316.8"	"100.000"	"58.9983"	"18491"	"18491"	"18473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"478.9"	""	"480.5"	""	"470.1"	""	"543.5"	""	"491.7"	"534.9"	""	"185"	"38"	"29.000"	"22.000"	"0.0013494031907547"	""	"0.0007076"	"0.006934"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFGHLLR"	"[R].tFGHLLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"358.21991"	"1072.64518"	"1072.64648"	"-1.22"	"-0.00043"	"6/48"	"6"	"48"	"6656983.49291992"	"HCD"	"MS2"	"4.382827"	"182.7"	"100.000"	"32.5863"	"7748"	"7748"	"7720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.1"	""	"266.3"	""	"287.3"	""	"295.8"	""	"310.0"	"330.1"	""	"398"	"27"	"32.000"	"25.000"	"0.0356330564953024"	"19"	"0.000523"	"0.002844"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFGHLLR"	"[R].tFGHLLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"358.22009"	"1072.64573"	"1072.64648"	"-0.70"	"-0.00025"	"6/48"	"6"	"48"	"6803399.89447021"	"HCD"	"MS2"	"7.451273"	"185.6"	"100.000"	"32.6795"	"7829"	"7829"	"7798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.0"	""	"256.9"	""	"282.2"	""	"306.4"	""	"331.8"	"313.5"	""	"394"	"30"	"32.000"	"25.000"	"0.0201125078290413"	"21"	"0.000494"	"0.002653"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLWSGR"	"[K].iLLWSGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQV3"	"Protein FAM162A OS=Rattus norvegicus OX=10116 GN=Fam162a PE=2 SV=1"	"Q4QQV3"	"Protein FAM162A OS=Rattus norvegicus OX=10116 GN=Fam162a PE=2 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"537.33618"	"1073.66509"	"1073.66688"	"-1.67"	"-0.00090"	"6/48"	"6"	"48"	"3991059.02380371"	"HCD"	"MS2"	"0"	"192.1"	"100.000"	"53.3677"	"16261"	"16261"	"16251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.4"	""	"241.9"	""	"259.5"	""	"361.1"	""	"398.7"	"398.2"	""	"520"	"24"	"34.000"	"27.000"	"0.110401086626041"	""	"0.0006737"	"0.006566"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLWSGR"	"[K].iLLWSGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQV3"	"Protein FAM162A OS=Rattus norvegicus OX=10116 GN=Fam162a PE=2 SV=1"	"Q4QQV3"	"Protein FAM162A OS=Rattus norvegicus OX=10116 GN=Fam162a PE=2 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"537.33667"	"1073.66606"	"1073.66688"	"-0.76"	"-0.00041"	"5/48"	"5"	"48"	"4070025.74719238"	"HCD"	"MS2"	"0"	"185.5"	"100.000"	"53.1797"	"16133"	"16133"	"16128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.9"	""	"242.1"	""	"240.5"	""	"363.3"	""	"382.4"	"361.8"	""	"520"	"29"	"34.000"	"27.000"	"0.035560949465492"	""	"0.0008731"	"0.00923"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGIISSR"	"[R].lVGIISSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.3667"	"0.0000"	"1"	"1"	"1"	"537.34723"	"1073.68718"	"1073.68801"	"-0.77"	"-0.00041"	"6/58"	"6"	"58"	"14088196.5820923"	"HCD"	"MS2"	"23.15055"	"516.1"	"81.712"	"42.4047"	"11800"	"11800"	"11779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"723.9"	""	"728.4"	""	"745.1"	""	"821.3"	""	"952.2"	"923.9"	""	"313"	"30"	"31.000"	"24.000"	"0.0147745527138747"	""	"0.001217"	"0.01752"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGIISSR"	"[R].lVGIISSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.3548"	"0.0000"	"1"	"1"	"1"	"537.34729"	"1073.68730"	"1073.68801"	"-0.66"	"-0.00035"	"6/58"	"6"	"58"	"13724844.4907227"	"HCD"	"MS2"	"25.29485"	"435.6"	"73.017"	"42.1453"	"11650"	"11650"	"11631"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"602.0"	""	"603.8"	""	"640.8"	""	"725.3"	""	"777.3"	"781.8"	""	"313"	"31"	"31.000"	"24.000"	"0.0131678339667473"	""	"0.000523"	"0.002948"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAAK"	"[R].aLAAAAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"537.35742"	"1073.70757"	"1073.70830"	"-0.68"	"-0.00037"	"6/50"	"6"	"50"	"6472362.92498779"	"HCD"	"MS2"	"4.992431"	"471.2"	"100.000"	"30.0488"	"6752"	"6752"	"6729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"414.7"	""	"410.5"	""	"447.3"	""	"982.5"	""	"1243.7"	"1002.9"	""	"191"	"27"	"29.000"	"22.000"	"0.0205117810279466"	""	"0.0009727"	"0.01053"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAAK"	"[R].aLAAAAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"537.35742"	"1073.70757"	"1073.70830"	"-0.68"	"-0.00037"	"6/50"	"6"	"50"	"5658896.06945801"	"HCD"	"MS2"	"15.48289"	"449.4"	"100.000"	"29.9979"	"6690"	"6690"	"6666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"420.6"	""	"426.2"	""	"451.5"	""	"929.8"	""	"1130.9"	"924.8"	""	"191"	"28"	"29.000"	"22.000"	"0.0146555921857333"	"21"	"0.0008731"	"0.008511"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALSAGK"	"[R].aALSAGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"538.34619"	"1075.68511"	"1075.68757"	"-2.29"	"-0.00123"	"6/48"	"6"	"48"	"5552080.03027344"	"HCD"	"MS2"	"0"	"455.1"	"100.000"	"28.7766"	"6245"	"6245"	"6241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"834.1"	""	"601.9"	""	"647.2"	""	"728.6"	"7.3"	"780.8"	"702.3"	""	"189"	"30"	"29.000"	"22.000"	"0.0096924107030758"	"20"	"0.0009727"	"0.01043"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALSAGK"	"[R].aALSAGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"538.34668"	"1075.68608"	"1075.68757"	"-1.38"	"-0.00074"	"6/48"	"6"	"48"	"1914660.23352051"	"HCD"	"MS2"	"0"	"178.5"	"100.000"	"29.0723"	"6356"	"6356"	"6346"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"257.3"	""	"221.9"	""	"259.9"	"2.2"	"292.5"	"13.5"	"323.0"	"319.9"	""	"189"	"4"	"29.000"	"22.000"	"3.5353450591709"	"13"	"0.00119"	"0.01607"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"538.80103"	"1076.59477"	"1076.59715"	"-2.20"	"-0.00119"	"6/54"	"6"	"54"	"6599271.07727051"	"HCD"	"MS2"	"23.82687"	"393.6"	"94.472"	"43.1017"	"12086"	"12086"	"12066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"611.1"	""	"644.8"	""	"623.4"	""	"490.1"	"26.5"	"621.6"	"704.5"	""	"759"	"24"	"35.000"	"28.000"	"0.144281875903653"	"16"	"0.0006037"	"0.004833"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEFLGR"	"[K].iLEFLGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"538.83673"	"1076.66619"	"1076.66655"	"-0.34"	"-0.00018"	"5/48"	"5"	"48"	"14673917.925354"	"HCD"	"MS2"	"11.48301"	"456.3"	"78.958"	"63.0500"	"20198"	"20198"	"20179"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"575.5"	""	"785.8"	""	"648.6"	""	"695.5"	""	"821.6"	"794.9"	""	"356"	"26"	"32.000"	"25.000"	"0.0459642313932958"	"24"	"0.002297"	"0.0335"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEFLGR"	"[K].iLEFLGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"538.83698"	"1076.66667"	"1076.66655"	"0.12"	"0.00006"	"5/48"	"5"	"48"	"14372277.9595337"	"HCD"	"MS2"	"8.395978"	"612.3"	"97.120"	"62.9917"	"20122"	"20122"	"20105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"762.9"	""	"1057.1"	""	"840.3"	""	"963.1"	"0.4"	"1123.4"	"1052.8"	""	"323"	"27"	"32.000"	"25.000"	"0.0302115165669076"	"25"	"0.001966"	"0.0282"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGADFLGR"	"[R].iGADFLGR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"539.31598"	"1077.62468"	"1077.62541"	"-0.68"	"-0.00036"	"7/56"	"7"	"56"	"2796470.05963135"	"HCD"	"MS2"	"8.557829"	"158.2"	"100.000"	"45.3865"	"13013"	"13013"	"12987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.0"	""	"216.9"	""	"258.3"	""	"244.4"	"1.2"	"263.1"	"281.9"	""	"544"	"20"	"34.000"	"27.000"	"0.255016865883839"	"19"	"0.0001889"	"0.00105"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLFSR"	"[R].vLDLFSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85118"	"N-acetyltransferase family 8 member 2 OS=Rattus norvegicus OX=10116 GN=Nat8f2 PE=3 SV=1"	"P85118"	"N-acetyltransferase family 8 member 2 OS=Rattus norvegicus OX=10116 GN=Nat8f2 PE=3 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"539.82617"	"1078.64507"	"1078.64581"	"-0.69"	"-0.00037"	"5/54"	"5"	"54"	"3832739.60766602"	"HCD"	"MS2"	"15.93444"	"176.5"	"100.000"	"58.8294"	"18476"	"18476"	"18453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"256.1"	""	"246.5"	""	"250.0"	""	"280.5"	"0.1"	"312.6"	"325.5"	""	"363"	"22"	"32.000"	"25.000"	"0.11139780393741"	"20"	"0.0006037"	"0.00383"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLFSR"	"[R].vLDLFSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85118"	"N-acetyltransferase family 8 member 2 OS=Rattus norvegicus OX=10116 GN=Nat8f2 PE=3 SV=1"	"P85118"	"N-acetyltransferase family 8 member 2 OS=Rattus norvegicus OX=10116 GN=Nat8f2 PE=3 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"539.82629"	"1078.64531"	"1078.64581"	"-0.46"	"-0.00025"	"5/54"	"5"	"54"	"3420505.32519531"	"HCD"	"MS2"	"42.58069"	"168.6"	"100.000"	"58.6518"	"18354"	"18354"	"18329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"239.8"	""	"232.4"	""	"244.1"	""	"254.7"	""	"315.0"	"311.3"	""	"363"	"20"	"32.000"	"25.000"	"0.165529967343098"	"23"	"0.0006037"	"0.004531"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGYPFLR"	"[R].vGYPFLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"540.82306"	"1080.63884"	"1080.64033"	"-1.38"	"-0.00075"	"6/50"	"6"	"50"	"10425821.8421021"	"HCD"	"MS2"	"36.13599"	"395.2"	"86.805"	"46.4242"	"13385"	"13385"	"13368"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"474.5"	""	"515.0"	""	"505.5"	""	"634.4"	""	"807.8"	"815.1"	""	"259"	"23"	"31.000"	"24.000"	"0.0678062565378547"	"22"	"0.001217"	"0.01633"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGYPFLR"	"[R].vGYPFLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"540.82416"	"1080.64104"	"1080.64033"	"0.65"	"0.00035"	"6/50"	"6"	"50"	"8790988.06378174"	"HCD"	"MS2"	"36.42525"	"386.3"	"100.000"	"46.7231"	"13555"	"13555"	"13538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"426.9"	""	"502.3"	""	"496.3"	""	"654.3"	"5.6"	"777.5"	"805.2"	""	"285"	"21"	"31.000"	"24.000"	"0.102521479365527"	"22"	"0.001058"	"0.01346"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILIHSLR"	"[R].iLIHSLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"3"	"360.90750"	"1080.70795"	"1080.70908"	"-1.05"	"-0.00038"	"6/48"	"6"	"48"	"9871810.74707031"	"HCD"	"MS2"	"31.85436"	"343.8"	"100.000"	"33.7792"	"8229"	"8229"	"8204"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.6"	""	"449.8"	""	"515.7"	""	"561.1"	"16.3"	"621.5"	"615.9"	""	"40"	"13"	"23.000"	"16.000"	"0.0895426608352725"	""	"0.006845"	"0.2557"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVVPVIR"	"[R].gLVVPVIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.36774"	"1081.72820"	"1081.72948"	"-1.19"	"-0.00064"	"7/58"	"7"	"58"	"23813785.8977051"	"HCD"	"MS2"	"29.13452"	"262.5"	"27.730"	"46.2363"	"13307"	"13307"	"13288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"323.0"	""	"333.9"	""	"353.1"	""	"407.3"	""	"528.9"	"552.4"	""	"16"	"30"	"19.000"	"13.000"	"0.00083002273265441"	""	"0.005975"	"0.2024"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVVPVIR"	"[R].gLVVPVIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.36780"	"1081.72832"	"1081.72948"	"-1.07"	"-0.00058"	"7/58"	"7"	"58"	"22373368.3491211"	"HCD"	"MS2"	"23.92653"	"361.5"	"37.076"	"46.4617"	"13447"	"13447"	"13429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"429.3"	""	"456.8"	""	"491.1"	""	"587.4"	""	"712.8"	"760.0"	""	"16"	"37"	"19.000"	"13.000"	"0.000171431248089605"	""	"0.008737"	"0.3844"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPVFMGR"	"[K].fPVFMGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"541.80450"	"1082.60173"	"1082.60184"	"-0.10"	"-0.00005"	"6/50"	"6"	"50"	"10026398.65271"	"HCD"	"MS2"	"17.09562"	"413.3"	"100.000"	"52.3883"	"15814"	"15814"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"782.5"	""	"789.2"	""	"632.3"	""	"413.4"	""	"692.8"	"597.1"	""	"364"	"23"	"32.000"	"25.000"	"0.100016439042088"	""	"0.0009727"	"0.01032"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPVFMGR"	"[K].fPVFMGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"541.80475"	"1082.60222"	"1082.60184"	"0.35"	"0.00019"	"6/50"	"6"	"50"	"9528905.63317871"	"HCD"	"MS2"	"6.312999"	"388.0"	"100.000"	"52.5609"	"15935"	"15935"	"15910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"742.3"	""	"700.6"	""	"583.6"	""	"421.8"	""	"666.5"	"550.6"	""	"364"	"20"	"32.000"	"25.000"	"0.195466073046106"	""	"0.001217"	"0.01849"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLPFLF"	"[K].aFLPFLF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJM1"	"Polyprenol reductase OS=Rattus norvegicus OX=10116 GN=Srd5a3 PE=1 SV=2"	"Q5RJM1"	"Polyprenol reductase OS=Rattus norvegicus OX=10116 GN=Srd5a3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.32532"	"1083.64336"	"1083.64402"	"-0.61"	"-0.00033"	"4/52"	"4"	"52"	"153474.74597168"	"HCD"	"MS2"	"9.261202"	"2.4"	"100.000"	"111.0098"	"36268"	"36268"	"36266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"4.6"	""	"1.9"	""	"5.6"	""	"4.3"	"2.4"	""	"251"	"22"	"30.000"	"23.000"	"0.0829170277249533"	"14"	"0.00252"	"0.03856"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLPFLF"	"[K].aFLPFLF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJM1"	"Polyprenol reductase OS=Rattus norvegicus OX=10116 GN=Srd5a3 PE=1 SV=2"	"Q5RJM1"	"Polyprenol reductase OS=Rattus norvegicus OX=10116 GN=Srd5a3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.32538"	"1083.64348"	"1083.64402"	"-0.50"	"-0.00027"	"5/52"	"5"	"52"	"131618.999755859"	"HCD"	"MS2"	"21.97658"	"2.2"	"100.000"	"111.1237"	"36287"	"36287"	"36284"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"3.0"	""	"2.7"	""	"6.7"	""	"4.4"	"4.5"	""	"251"	"20"	"30.000"	"23.000"	"0.128423270531235"	"14"	"0.0007793"	"0.007303"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLPFLF"	"[K].aFLPFLF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJM1"	"Polyprenol reductase OS=Rattus norvegicus OX=10116 GN=Srd5a3 PE=1 SV=2"	"Q5RJM1"	"Polyprenol reductase OS=Rattus norvegicus OX=10116 GN=Srd5a3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.32544"	"1083.64360"	"1083.64402"	"-0.39"	"-0.00021"	"5/52"	"5"	"52"	"298972.183044434"	"HCD"	"MS2"	"8.448699"	"3.5"	"100.000"	"111.3828"	"36326"	"36326"	"36324"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.9"	""	"4.2"	""	"4.1"	""	"6.3"	""	"7.9"	"6.3"	""	"251"	"28"	"30.000"	"23.000"	"0.0220619413551816"	"14"	"0.001058"	"0.01329"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMFQTR"	"[K].sSMFQTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.28326"	"1085.55925"	"1085.56110"	"-1.70"	"-0.00092"	"3/62"	"3"	"62"	"1826125.30187988"	"HCD"	"MS2"	"22.44445"	"181.3"	"100.000"	"29.7777"	"6600"	"6600"	"6572"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.2"	""	"250.4"	""	"247.4"	""	"267.5"	"5.3"	"342.0"	"334.0"	""	"265"	"11"	"31.000"	"24.000"	"1.03804427666523"	"13"	"0.001718"	"0.02375"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMFQTR"	"[K].sSMFQTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.28369"	"1085.56011"	"1085.56110"	"-0.91"	"-0.00049"	"9/62"	"9"	"62"	"1796484.54180908"	"HCD"	"MS2"	"13.0392"	"177.8"	"100.000"	"29.8631"	"6676"	"6676"	"6650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.8"	""	"251.8"	""	"224.9"	""	"274.2"	"14.6"	"332.9"	"316.9"	""	"273"	"6"	"31.000"	"24.000"	"3.3123227797875"	"13"	"0.004726"	"0.1369"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSVPWR"	"[R].vLSVPWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P42533"	"Tissue factor OS=Rattus norvegicus OX=10116 GN=F3 PE=2 SV=1"	"P42533"	"Tissue factor OS=Rattus norvegicus OX=10116 GN=F3 PE=2 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"543.33582"	"1085.66435"	"1085.66688"	"-2.33"	"-0.00126"	"10/48"	"10"	"48"	"3107002.27325439"	"HCD"	"MS2"	"0"	"152.3"	"100.000"	"49.9941"	"14888"	"14888"	"14862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"218.1"	""	"200.3"	""	"239.8"	""	"221.9"	"4.3"	"267.2"	"291.3"	""	"298"	"10"	"31.000"	"24.000"	"1.40665070566602"	"21"	"0.00103"	"0.01129"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSVPWR"	"[R].vLSVPWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P42533"	"Tissue factor OS=Rattus norvegicus OX=10116 GN=F3 PE=2 SV=1"	"P42533"	"Tissue factor OS=Rattus norvegicus OX=10116 GN=F3 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"543.33630"	"1085.66533"	"1085.66688"	"-1.43"	"-0.00078"	"5/48"	"5"	"48"	"3967125.45245361"	"HCD"	"MS2"	"0"	"177.3"	"100.000"	"49.7170"	"14728"	"14728"	"14703"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.1"	""	"249.0"	""	"271.9"	""	"267.6"	""	"299.2"	"336.1"	""	"299"	"8"	"31.000"	"24.000"	"2.48108242661915"	"14"	"0.001686"	"0.02316"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNTLLQR"	"[K].lNTLLQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"543.84442"	"1086.68157"	"1086.68326"	"-1.56"	"-0.00085"	"5/58"	"5"	"58"	"56132511.9107666"	"HCD"	"MS2"	"54.41378"	"1128.7"	"33.565"	"41.3755"	"11382"	"11382"	"11357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1635.1"	""	"1594.1"	""	"1296.3"	""	"2014.5"	""	"2143.3"	"2023.9"	""	"403"	"12"	"33.000"	"26.000"	"1.34052540974651"	"18"	"0.006471"	"0.2357"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNTLLQR"	"[K].lNTLLQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"543.84454"	"1086.68181"	"1086.68326"	"-1.33"	"-0.00072"	"5/58"	"5"	"58"	"66380781.0629883"	"HCD"	"MS2"	"33.44192"	"1026.7"	"22.621"	"41.2176"	"11273"	"11273"	"11253"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1533.2"	""	"1473.7"	""	"1179.8"	""	"1906.1"	""	"1859.6"	"1787.5"	""	"405"	"11"	"33.000"	"26.000"	"1.5361195894341"	"20"	"0.009397"	"0.4186"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVVGIK"	"[K].gGVVGIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"544.36517"	"1087.72307"	"1087.72395"	"-0.81"	"-0.00044"	"6/50"	"6"	"50"	"50974627.2463379"	"HCD"	"MS2"	"0"	"929.5"	"26.068"	"33.4974"	"8114"	"8114"	"8105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1308.7"	""	"1139.8"	""	"1173.8"	""	"1470.5"	""	"1505.5"	"2222.6"	""	"195"	"28"	"29.000"	"22.000"	"0.0151009620343967"	"22"	"0.003286"	"0.07519"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVVGIK"	"[K].gGVVGIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"544.36536"	"1087.72344"	"1087.72395"	"-0.47"	"-0.00026"	"6/50"	"6"	"50"	"23901306.5193481"	"HCD"	"MS2"	"0"	"1090.0"	"60.778"	"33.5089"	"8163"	"8163"	"8145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1575.6"	""	"1390.3"	""	"1403.7"	""	"1724.3"	""	"1769.5"	"2470.1"	""	"195"	"28"	"29.000"	"22.000"	"0.0164438919975402"	"22"	"0.001999"	"0.03117"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGMFLVR"	"[R].hGMFLVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"363.54578"	"1088.62278"	"1088.62364"	"-0.79"	"-0.00029"	"5/50"	"5"	"50"	"3877671.13439941"	"HCD"	"MS2"	"12.32203"	"130.1"	"100.000"	"31.5552"	"7368"	"7368"	"7341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.9"	""	"165.8"	""	"200.8"	""	"203.0"	"0.1"	"224.1"	"269.1"	""	"750"	"28"	"35.000"	"28.000"	"0.0559797903592123"	"21"	"0.0002277"	"0.001342"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGMFLVR"	"[R].hGMFLVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"363.54590"	"1088.62314"	"1088.62364"	"-0.45"	"-0.00016"	"6/50"	"6"	"50"	"3443134.50506592"	"HCD"	"MS2"	"12.38439"	"121.7"	"100.000"	"31.4475"	"7282"	"7282"	"7254"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.9"	""	"152.6"	""	"194.6"	""	"191.7"	"3.4"	"220.1"	"235.9"	""	"768"	"30"	"35.000"	"28.000"	"0.0403024292602492"	"21"	"0.0002277"	"0.001124"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGGK"	"[R].sAPGGGGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"544.82629"	"1088.64531"	"1088.64643"	"-1.03"	"-0.00056"	"7/56"	"7"	"56"	"1406149.76959229"	"HCD"	"MS2"	"0"	"93.9"	"100.000"	"22.1773"	"3615"	"3615"	"3599"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.4"	""	"111.8"	""	"130.9"	""	"182.1"	""	"161.3"	"161.0"	""	"957"	"32"	"36.000"	"29.000"	"0.0279178482394987"	"16"	"0.0004166"	"0.002201"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGGK"	"[R].sAPGGGGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"544.82642"	"1088.64556"	"1088.64643"	"-0.80"	"-0.00044"	"6/56"	"6"	"56"	"1817916.69573975"	"HCD"	"MS2"	"0"	"117.6"	"100.000"	"22.1992"	"3589"	"3589"	"3569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.4"	""	"154.8"	""	"146.3"	""	"226.9"	""	"213.0"	"201.4"	""	"955"	"37"	"36.000"	"29.000"	"0.0086491489422586"	"21"	"0.000523"	"0.003168"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGITAAK"	"[K].aGITAAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"545.35492"	"1089.70256"	"1089.70322"	"-0.60"	"-0.00033"	"6/48"	"6"	"48"	"1789685.51678467"	"HCD"	"MS2"	"0"	"171.3"	"100.000"	"29.0402"	"6344"	"6344"	"6325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.6"	""	"244.4"	""	"223.5"	""	"252.8"	""	"306.1"	"317.1"	""	"157"	"39"	"28.000"	"21.000"	"0.0010986760482195"	""	"0.0006037"	"0.00405"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IADFGLAR"	"[K].iADFGLAR.[ALEIVDG]"	"N-Term(TMT6plex)"	"5"	"11"	"P50545; Q07014; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4;Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3;Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"Q01621; Q62726; P50545; Q6P6U0; Q07014; Q62844; P20793; Q4KM34; Q04589; Q498D6; F1LM93"	"Proto-oncogene tyrosine-protein kinase LCK OS=Rattus norvegicus OX=10116 GN=Lck PE=1 SV=3; Serine/threonine-protein kinase ICK OS=Rattus norvegicus OX=10116 GN=Ick PE=1 SV=1; Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Fgr OS=Rattus norvegicus OX=10116 GN=Fgr PE=1 SV=1; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Serine/threonine-protein kinase MAK OS=Rattus norvegicus OX=10116 GN=Mak PE=1 SV=2; Cyclin-dependent kinase 20 OS=Rattus norvegicus OX=10116 GN=Cdk20 PE=2 SV=2; Fibroblast growth factor receptor 1 OS=Rattus norvegicus OX=10116 GN=Fgfr1 PE=1 SV=1; Fibroblast growth factor receptor 4 OS=Rattus norvegicus OX=10116 GN=Fgfr4 PE=1 SV=1; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"546.32465"	"1091.64202"	"1091.64106"	"0.88"	"0.00048"	"6/56"	"6"	"56"	"5507425.49584961"	"HCD"	"MS2"	"38.57021"	"292.9"	"100.000"	"45.4670"	"13046"	"13046"	"13019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"360.3"	""	"411.3"	""	"382.9"	""	"457.9"	"5.2"	"566.0"	"595.1"	""	"566"	"24"	"34.000"	"27.000"	"0.111631416487304"	""	"0.0004166"	"0.002308"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADFGLAR"	"[K].lADFGLAR.[ALEIVDG]"	"N-Term(TMT6plex)"	"5"	"8"	"Q641Z4; O35831"	"Cyclin-dependent kinase 9 OS=Rattus norvegicus OX=10116 GN=Cdk9 PE=2 SV=1;Cyclin-dependent kinase 17 OS=Rattus norvegicus OX=10116 GN=Cdk17 PE=1 SV=1"	"Q03114; Q63699; O35832; P35426; Q3MJK5; Q641Z4; P39951; O35831"	"Cyclin-dependent-like kinase 5 OS=Rattus norvegicus OX=10116 GN=Cdk5 PE=1 SV=1; Cyclin-dependent kinase 2 OS=Rattus norvegicus OX=10116 GN=Cdk2 PE=1 SV=1; Cyclin-dependent kinase 18 OS=Rattus norvegicus OX=10116 GN=Cdk18 PE=1 SV=1; Cyclin-dependent kinase 4 OS=Rattus norvegicus OX=10116 GN=Cdk4 PE=1 SV=1; Cyclin-dependent kinase 12 OS=Rattus norvegicus OX=10116 GN=Cdk12 PE=1 SV=1; Cyclin-dependent kinase 9 OS=Rattus norvegicus OX=10116 GN=Cdk9 PE=2 SV=1; Cyclin-dependent kinase 1 OS=Rattus norvegicus OX=10116 GN=Cdk1 PE=1 SV=1; Cyclin-dependent kinase 17 OS=Rattus norvegicus OX=10116 GN=Cdk17 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"546.32465"	"1091.64202"	"1091.64106"	"0.88"	"0.00048"	"6/56"	"6"	"56"	"5507425.49584961"	"HCD"	"MS2"	"38.57021"	"292.9"	"100.000"	"45.4670"	"13046"	"13046"	"13019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"360.3"	""	"411.3"	""	"382.9"	""	"457.9"	"5.2"	"566.0"	"595.1"	""	"566"	"24"	"34.000"	"27.000"	"0.111631416487304"	""	"0.0004166"	"0.002308"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IADFGLAR"	"[K].iADFGLAR.[ALEIVDG]"	"N-Term(TMT6plex)"	"5"	"11"	"P50545; Q07014; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4;Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3;Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"Q01621; Q62726; P50545; Q6P6U0; Q07014; Q62844; P20793; Q4KM34; Q04589; Q498D6; F1LM93"	"Proto-oncogene tyrosine-protein kinase LCK OS=Rattus norvegicus OX=10116 GN=Lck PE=1 SV=3; Serine/threonine-protein kinase ICK OS=Rattus norvegicus OX=10116 GN=Ick PE=1 SV=1; Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Fgr OS=Rattus norvegicus OX=10116 GN=Fgr PE=1 SV=1; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Serine/threonine-protein kinase MAK OS=Rattus norvegicus OX=10116 GN=Mak PE=1 SV=2; Cyclin-dependent kinase 20 OS=Rattus norvegicus OX=10116 GN=Cdk20 PE=2 SV=2; Fibroblast growth factor receptor 1 OS=Rattus norvegicus OX=10116 GN=Fgfr1 PE=1 SV=1; Fibroblast growth factor receptor 4 OS=Rattus norvegicus OX=10116 GN=Fgfr4 PE=1 SV=1; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"546.32526"	"1091.64324"	"1091.64106"	"1.99"	"0.00109"	"6/56"	"6"	"56"	"6326102.73797607"	"HCD"	"MS2"	"46.40313"	"323.5"	"100.000"	"45.2027"	"12889"	"12889"	"12864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.5"	""	"421.8"	""	"437.9"	""	"507.5"	"1.5"	"625.9"	"643.0"	""	"538"	"25"	"34.000"	"27.000"	"0.0788410282972337"	""	"0.0005564"	"0.003498"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADFGLAR"	"[K].lADFGLAR.[ALEIVDG]"	"N-Term(TMT6plex)"	"5"	"8"	"Q641Z4; O35831"	"Cyclin-dependent kinase 9 OS=Rattus norvegicus OX=10116 GN=Cdk9 PE=2 SV=1;Cyclin-dependent kinase 17 OS=Rattus norvegicus OX=10116 GN=Cdk17 PE=1 SV=1"	"Q03114; Q63699; O35832; P35426; Q3MJK5; Q641Z4; P39951; O35831"	"Cyclin-dependent-like kinase 5 OS=Rattus norvegicus OX=10116 GN=Cdk5 PE=1 SV=1; Cyclin-dependent kinase 2 OS=Rattus norvegicus OX=10116 GN=Cdk2 PE=1 SV=1; Cyclin-dependent kinase 18 OS=Rattus norvegicus OX=10116 GN=Cdk18 PE=1 SV=1; Cyclin-dependent kinase 4 OS=Rattus norvegicus OX=10116 GN=Cdk4 PE=1 SV=1; Cyclin-dependent kinase 12 OS=Rattus norvegicus OX=10116 GN=Cdk12 PE=1 SV=1; Cyclin-dependent kinase 9 OS=Rattus norvegicus OX=10116 GN=Cdk9 PE=2 SV=1; Cyclin-dependent kinase 1 OS=Rattus norvegicus OX=10116 GN=Cdk1 PE=1 SV=1; Cyclin-dependent kinase 17 OS=Rattus norvegicus OX=10116 GN=Cdk17 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"546.32526"	"1091.64324"	"1091.64106"	"1.99"	"0.00109"	"6/56"	"6"	"56"	"6326102.73797607"	"HCD"	"MS2"	"46.40313"	"323.5"	"100.000"	"45.2027"	"12889"	"12889"	"12864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.5"	""	"421.8"	""	"437.9"	""	"507.5"	"1.5"	"625.9"	"643.0"	""	"538"	"25"	"34.000"	"27.000"	"0.0788410282972337"	""	"0.0005564"	"0.003498"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIFFSHR"	"[R].gIFFSHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"364.87622"	"1092.61411"	"1092.61518"	"-0.98"	"-0.00036"	"9/48"	"9"	"48"	"11852691.9118042"	"HCD"	"MS2"	"0"	"138.6"	"100.000"	"33.0234"	"7970"	"7970"	"7942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.7"	""	"209.3"	""	"216.1"	""	"221.8"	"0.3"	"229.5"	"234.4"	""	"579"	"20"	"34.000"	"27.000"	"0.276470353653206"	"18"	"0.002925"	"0.05054"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIFFSHR"	"[R].gIFFSHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"364.87650"	"1092.61493"	"1092.61518"	"-0.23"	"-0.00008"	"9/48"	"9"	"48"	"11583732.2711792"	"HCD"	"MS2"	"34.24886"	"140.8"	"100.000"	"32.9439"	"7895"	"7895"	"7864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.9"	""	"205.2"	""	"225.0"	""	"220.8"	""	"248.7"	"237.3"	""	"612"	"21"	"34.000"	"27.000"	"0.249299510910377"	"17"	"0.003698"	"0.08537"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGLSLMR"	"[R].gMGLSLMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"547.30554"	"1093.60381"	"1093.60594"	"-1.95"	"-0.00106"	"6/56"	"6"	"56"	"12589065.1173096"	"HCD"	"MS2"	"34.69849"	"589.6"	"79.326"	"41.7743"	"11501"	"11501"	"11483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"990.5"	""	"831.6"	""	"917.2"	""	"660.2"	"3.5"	"982.1"	"1194.8"	""	"651"	"28"	"35.000"	"28.000"	"0.0483672051564421"	"23"	"0.0003839"	"0.001983"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGLSLMR"	"[R].gMGLSLMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"547.30585"	"1093.60442"	"1093.60594"	"-1.39"	"-0.00076"	"6/56"	"6"	"56"	"9995848.26416016"	"HCD"	"MS2"	"8.484202"	"419.1"	"73.770"	"42.0473"	"11657"	"11657"	"11634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"675.0"	""	"596.6"	""	"691.5"	""	"487.8"	""	"695.1"	"819.9"	""	"645"	"26"	"35.000"	"28.000"	"0.0886195864375524"	"21"	"0.0003839"	"0.001596"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNLHLR"	"[R].lVNLHLR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"Q7TP54"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1"	"Q7TP54; P02793"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1; Ferritin light chain 1 OS=Rattus norvegicus OX=10116 GN=Ftl1 PE=1 SV=3"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"365.23932"	"1093.70340"	"1093.70433"	"-0.85"	"-0.00031"	"6/58"	"6"	"58"	"9704738.71685791"	"HCD"	"MS2"	"47.30843"	"189.7"	"100.000"	"36.5213"	"9350"	"9350"	"9322"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.7"	""	"161.0"	""	"155.9"	""	"509.9"	""	"412.0"	"399.8"	""	"78"	"36"	"25.000"	"18.000"	"0.000889333408080163"	""	"0.002456"	"0.03682"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNLHLR"	"[R].lVNLHLR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"Q7TP54"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1"	"Q7TP54; P02793"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1; Ferritin light chain 1 OS=Rattus norvegicus OX=10116 GN=Ftl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"365.23935"	"1093.70349"	"1093.70433"	"-0.76"	"-0.00028"	"6/58"	"6"	"58"	"9809194.80810547"	"HCD"	"MS2"	"0"	"195.8"	"100.000"	"36.5968"	"9424"	"9424"	"9401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.8"	""	"181.0"	""	"154.9"	""	"537.4"	"1.5"	"421.7"	"402.1"	""	"78"	"31"	"25.000"	"18.000"	"0.00290445469823336"	"17"	"0.004291"	"0.1103"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLIAR"	"[R].mQHLIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"366.55264"	"1097.64338"	"1097.64510"	"-1.57"	"-0.00057"	"5/60"	"5"	"60"	"4884362.95233154"	"HCD"	"MS2"	"49.27129"	"231.4"	"100.000"	"27.5863"	"5781"	"5781"	"5762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.3"	""	"364.9"	""	"356.9"	""	"283.4"	""	"431.3"	"436.9"	""	"361"	"21"	"32.000"	"25.000"	"0.150133360684032"	"19"	"0.003107"	"0.05905"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLIAR"	"[R].mQHLIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"549.32550"	"1097.64372"	"1097.64510"	"-1.25"	"-0.00069"	"4/60"	"4"	"60"	"3392877.42944336"	"HCD"	"MS2"	"37.89275"	"211.4"	"100.000"	"27.5889"	"5782"	"5782"	"5762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"345.4"	""	"308.1"	""	"323.7"	""	"235.4"	""	"384.5"	"404.7"	""	"359"	"13"	"32.000"	"25.000"	"0.905867029126533"	"24"	"0.00103"	"0.01274"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLIAR"	"[R].mQHLIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"366.55280"	"1097.64383"	"1097.64510"	"-1.15"	"-0.00042"	"7/60"	"7"	"60"	"4119293.96746826"	"HCD"	"MS2"	"42.78811"	"206.3"	"100.000"	"27.5437"	"5729"	"5729"	"5708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.2"	""	"306.3"	""	"303.9"	""	"268.0"	""	"396.5"	"397.4"	""	"359"	"16"	"32.000"	"25.000"	"0.426642831449165"	"16"	"0.003197"	"0.06539"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLIAR"	"[R].mQHLIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"1"	"549.32599"	"1097.64470"	"1097.64510"	"-0.36"	"-0.00020"	"4/60"	"4"	"60"	"3046848.23126221"	"HCD"	"MS2"	"36.05976"	"179.7"	"100.000"	"27.5390"	"5727"	"5727"	"5708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"283.6"	""	"253.8"	""	"276.0"	""	"216.2"	""	"318.0"	"353.9"	""	"322"	"11"	"32.000"	"25.000"	"1.1771339244083"	"24"	"0.00103"	"0.01165"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPVSAIR"	"[R].iLPVSAIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"549.36530"	"1097.72331"	"1097.72440"	"-0.99"	"-0.00054"	"7/56"	"7"	"56"	"4801588.81097412"	"HCD"	"MS2"	"23.27851"	"222.1"	"100.000"	"44.8390"	"12789"	"12789"	"12771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.7"	""	"313.2"	""	"314.2"	""	"319.8"	"6.5"	"440.4"	"403.6"	""	"86"	"19"	"26.000"	"19.000"	"0.0564245956578258"	""	"0.0003839"	"0.001648"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPVSAIR"	"[R].iLPVSAIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"549.36542"	"1097.72356"	"1097.72440"	"-0.76"	"-0.00042"	"7/56"	"7"	"56"	"4704358.96459961"	"HCD"	"MS2"	"6.476201"	"230.9"	"100.000"	"44.6191"	"12650"	"12650"	"12630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"307.1"	""	"317.2"	""	"319.0"	""	"343.7"	"5.3"	"450.2"	"447.4"	""	"86"	"16"	"26.000"	"19.000"	"0.113623576564844"	""	"0.0006037"	"0.004753"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVSQVPR"	"[R].lAVSQVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"549.84418"	"1098.68108"	"1098.68326"	"-1.99"	"-0.00109"	"6/62"	"6"	"62"	"3022987.50891113"	"HCD"	"MS2"	"0"	"233.2"	"100.000"	"33.3669"	"8107"	"8107"	"8089"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"346.8"	""	"298.7"	""	"341.2"	""	"364.1"	"4.0"	"427.3"	"427.0"	""	"222"	"34"	"30.000"	"23.000"	"0.00409565134412867"	"19"	"0.0003839"	"0.002078"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVSQVPR"	"[R].lAVSQVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"549.84430"	"1098.68132"	"1098.68326"	"-1.76"	"-0.00097"	"6/62"	"6"	"62"	"3167472.77410889"	"HCD"	"MS2"	"0"	"219.3"	"94.516"	"33.2966"	"8037"	"8037"	"8019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"326.8"	""	"283.2"	""	"315.2"	""	"361.6"	"6.0"	"374.5"	"409.0"	""	"222"	"36"	"30.000"	"23.000"	"0.00257823784395639"	"22"	"0.0002277"	"0.001345"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFSTFR"	"[K].nVFSTFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"550.30872"	"1099.61016"	"1099.60976"	"0.36"	"0.00020"	"5/62"	"5"	"62"	"15943905.4362793"	"HCD"	"MS2"	"14.29959"	"558.7"	"70.746"	"40.7017"	"11105"	"11105"	"11085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"734.4"	""	"670.0"	""	"796.4"	""	"893.0"	""	"1099.8"	"1110.0"	""	"336"	"19"	"32.000"	"25.000"	"0.190243261023573"	"19"	"0.002361"	"0.03486"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFSTFR"	"[K].nVFSTFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"550.30890"	"1099.61052"	"1099.60976"	"0.69"	"0.00038"	"5/62"	"5"	"62"	"15572372.0661011"	"HCD"	"MS2"	"16.32128"	"552.9"	"66.232"	"40.5521"	"11000"	"11000"	"10981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"693.1"	""	"675.4"	""	"748.2"	""	"890.3"	"1.9"	"1132.4"	"1107.0"	""	"337"	"26"	"32.000"	"25.000"	"0.0433111689396554"	"18"	"0.002829"	"0.04623"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIHNIFR"	"[R].aIHNIFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F779"	"DCC-interacting protein 13-beta OS=Rattus norvegicus OX=10116 GN=Appl2 PE=2 SV=1"	"B4F779"	"DCC-interacting protein 13-beta OS=Rattus norvegicus OX=10116 GN=Appl2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"367.22345"	"1099.65580"	"1099.65738"	"-1.44"	"-0.00053"	"6/56"	"6"	"56"	"10721607.0819092"	"HCD"	"MS2"	"19.6324"	"180.8"	"100.000"	"31.2541"	"7203"	"7203"	"7174"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.5"	""	"257.1"	""	"262.2"	""	"307.4"	"0.1"	"326.7"	"335.0"	""	"338"	"31"	"32.000"	"25.000"	"0.0136737206961146"	"14"	"0.0001889"	"0.0009192"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLQGFR"	"[K].hLLQGFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"367.22351"	"1099.65598"	"1099.65738"	"-1.27"	"-0.00047"	"5/56"	"5"	"56"	"1765082.75042725"	"HCD"	"MS2"	"8.196168"	"73.1"	"100.000"	"32.2819"	"7666"	"7666"	"7642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.1"	""	"103.4"	""	"108.1"	""	"119.1"	"2.0"	"119.3"	"135.2"	""	"338"	"7"	"32.000"	"25.000"	"3.08948936528123"	"13"	"0.000523"	"0.002896"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLQGFR"	"[K].hLLQGFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"367.22357"	"1099.65616"	"1099.65738"	"-1.11"	"-0.00041"	"6/56"	"6"	"56"	"45031815.0958252"	"HCD"	"MS2"	"3.516262"	"726.5"	"99.139"	"31.6244"	"7354"	"7354"	"7334"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"995.1"	""	"1076.3"	""	"1097.4"	""	"1265.6"	""	"1130.4"	"1309.7"	""	"338"	"31"	"32.000"	"25.000"	"0.0123847346100475"	"14"	"0.000523"	"0.002871"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLQGFR"	"[K].hLLQGFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.33173"	"1099.65618"	"1099.65738"	"-1.09"	"-0.00060"	"5/56"	"5"	"56"	"20186592.2269287"	"HCD"	"MS2"	"0"	"897.7"	"100.000"	"31.6723"	"7374"	"7374"	"7350"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1308.7"	""	"1335.8"	""	"1311.3"	""	"1493.5"	"0.0"	"1415.5"	"1627.1"	""	"338"	"22"	"32.000"	"25.000"	"0.104444771623392"	"14"	"0.002711"	"0.04154"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIHNIFR"	"[R].aIHNIFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F779"	"DCC-interacting protein 13-beta OS=Rattus norvegicus OX=10116 GN=Appl2 PE=2 SV=1"	"B4F779"	"DCC-interacting protein 13-beta OS=Rattus norvegicus OX=10116 GN=Appl2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"367.22360"	"1099.65625"	"1099.65738"	"-1.02"	"-0.00038"	"5/56"	"5"	"56"	"9879054.65209961"	"HCD"	"MS2"	"8.377391"	"168.0"	"100.000"	"31.3531"	"7285"	"7285"	"7264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.3"	""	"245.1"	""	"230.2"	""	"284.6"	""	"316.2"	"314.2"	""	"338"	"30"	"32.000"	"25.000"	"0.0189621118777032"	"14"	"0.0001889"	"0.0009668"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLQGFR"	"[K].hLLQGFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"367.22369"	"1099.65653"	"1099.65738"	"-0.77"	"-0.00028"	"6/56"	"6"	"56"	"79011345.1862793"	"HCD"	"MS2"	"1.369377"	"508.7"	"40.743"	"31.7571"	"7451"	"7451"	"7434"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"740.0"	""	"741.4"	""	"763.3"	""	"883.7"	""	"791.0"	"895.9"	""	"384"	"26"	"32.000"	"25.000"	"0.043782567782408"	"14"	"0.0008731"	"0.008439"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLQGFR"	"[K].hLLQGFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.33234"	"1099.65740"	"1099.65738"	"0.02"	"0.00001"	"5/56"	"5"	"56"	"22237073.09375"	"HCD"	"MS2"	"5.295741"	"830.1"	"83.658"	"31.8055"	"7470"	"7470"	"7450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1188.0"	""	"1203.6"	""	"1236.7"	""	"1395.6"	""	"1311.6"	"1519.1"	""	"377"	"20"	"32.000"	"25.000"	"0.176730438305528"	"14"	"0.002829"	"0.0485"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLQEVR"	"[R].lLLQEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"550.35474"	"1099.70220"	"1099.70366"	"-1.33"	"-0.00073"	"5/54"	"5"	"54"	"27400677.1947021"	"HCD"	"MS2"	"4.530213"	"446.9"	"37.303"	"42.9278"	"11969"	"11969"	"11956"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"722.9"	""	"802.2"	""	"600.3"	""	"743.1"	""	"695.1"	"661.6"	""	"213"	"36"	"30.000"	"23.000"	"0.00251390931833731"	""	"0.002829"	"0.0486"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEVLGR"	"[K].aLLEVLGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"550.35504"	"1099.70281"	"1099.70366"	"-0.78"	"-0.00043"	"6/56"	"6"	"56"	"4860813.31921387"	"HCD"	"MS2"	"35.19597"	"199.8"	"100.000"	"54.1900"	"16530"	"16530"	"16509"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.1"	""	"274.7"	""	"289.0"	""	"317.0"	"1.6"	"350.2"	"344.8"	""	"213"	"42"	"30.000"	"23.000"	"0.000614256283512747"	"22"	"0.0003146"	"0.001433"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEVLGR"	"[K].aLLEVLGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"550.35541"	"1099.70354"	"1099.70366"	"-0.11"	"-0.00006"	"6/56"	"6"	"56"	"2845370.84802246"	"HCD"	"MS2"	"16.47507"	"142.7"	"100.000"	"54.5185"	"16664"	"16664"	"16640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.0"	""	"192.6"	""	"214.9"	""	"216.5"	"0.8"	"264.1"	"272.0"	""	"213"	"37"	"30.000"	"23.000"	"0.00216944981275659"	"20"	"0.0001889"	"0.0006724"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEVLGR"	"[K].aLLEVLGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"550.35565"	"1099.70403"	"1099.70366"	"0.33"	"0.00018"	"6/56"	"6"	"56"	"5946281.06878662"	"HCD"	"MS2"	"17.94452"	"243.5"	"100.000"	"54.4329"	"16682"	"16682"	"16667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"382.6"	""	"348.6"	""	"372.1"	""	"356.5"	"1.5"	"429.2"	"413.6"	""	"213"	"41"	"30.000"	"23.000"	"0.000923314397682501"	"22"	"0.0001889"	"0.0008122"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLHYGR"	"[R].lLLHYGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QYJ2"	"Ras GTPase-activating protein 3 OS=Rattus norvegicus OX=10116 GN=Rasa3 PE=1 SV=2"	"Q9QYJ2"	"Ras GTPase-activating protein 3 OS=Rattus norvegicus OX=10116 GN=Rasa3 PE=1 SV=2"	"0"	"3"	"3"	"0.3600"	"0.0000"	"1"	"1"	"1"	"367.56363"	"1100.67633"	"1100.67778"	"-1.31"	"-0.00048"	"5/50"	"5"	"50"	"3825027.83850098"	"HCD"	"MS2"	"0"	"105.2"	"100.000"	"34.7422"	"8620"	"8620"	"8590"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.0"	""	"142.6"	""	"146.2"	""	"174.2"	""	"205.7"	"207.2"	""	"363"	"25"	"32.000"	"25.000"	"0.0641027453172402"	""	"0.0008453"	"0.008023"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLQEVR"	"[R].lLLqEVR.[L]"	"N-Term(TMT6plex); Q4(Deamidated)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.1053"	"0.0000"	"1"	"1"	"1"	"367.56412"	"1100.67780"	"1100.68768"	"-8.97"	"-0.00329"	"5/54"	"5"	"54"	"3851642.21337891"	"HCD"	"MS2"	"11.23854"	"103.7"	"100.000"	"34.7858"	"8681"	"8681"	"8650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.7"	""	"137.5"	""	"158.6"	""	"179.4"	"0.0"	"197.5"	"189.9"	""	"487"	"19"	"33.000"	"26.000"	"0.333809710061142"	""	"0.007565"	"0.295"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQAAGK"	"[K].aPQAAGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"550.84412"	"1100.68096"	"1100.68281"	"-1.69"	"-0.00093"	"5/58"	"5"	"58"	"992743.865478516"	"HCD"	"MS2"	"0"	"84.6"	"100.000"	"24.6117"	"4541"	"4541"	"4512"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.9"	""	"127.9"	""	"120.1"	""	"128.3"	""	"171.6"	"144.6"	""	"470"	"21"	"33.000"	"26.000"	"0.193672457028055"	"16"	"0.0003839"	"0.001584"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVNLTGR"	"[K].iVVNLTGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"550.85193"	"1100.69658"	"1100.69891"	"-2.12"	"-0.00116"	"6/64"	"6"	"64"	"17587990.3581543"	"HCD"	"MS2"	"18.85582"	"364.1"	"36.556"	"41.4373"	"11407"	"11407"	"11389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"499.3"	""	"545.1"	""	"602.8"	""	"564.6"	""	"631.0"	"607.8"	""	"391"	"33"	"32.000"	"25.000"	"0.010003379884813"	"16"	"0.0006037"	"0.005308"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVNLTGR"	"[K].iVVNLTGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"550.85211"	"1100.69695"	"1100.69891"	"-1.78"	"-0.00098"	"6/64"	"6"	"64"	"11405894.9365234"	"HCD"	"MS2"	"16.08221"	"395.7"	"58.680"	"41.2906"	"11303"	"11303"	"11285"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"507.7"	""	"584.4"	""	"680.4"	""	"609.3"	""	"693.7"	"672.9"	""	"391"	"32"	"32.000"	"25.000"	"0.013587725408861"	"20"	"0.0004557"	"0.002547"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFINLPR"	"[K].iFINLPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.35181"	"1101.69634"	"1101.69818"	"-1.67"	"-0.00092"	"5/56"	"5"	"56"	"2399076.22808838"	"HCD"	"MS2"	"24.06954"	"140.7"	"100.000"	"54.0707"	"16535"	"16535"	"16518"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"190.9"	""	"176.2"	""	"213.2"	""	"235.3"	""	"263.4"	"256.6"	""	"425"	"30"	"33.000"	"26.000"	"0.0213972979631009"	"14"	"0.0006037"	"0.003904"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFINLPR"	"[K].iFINLPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"551.35205"	"1101.69682"	"1101.69818"	"-1.23"	"-0.00068"	"5/56"	"5"	"56"	"3320981.35754395"	"HCD"	"MS2"	"0"	"190.7"	"100.000"	"53.8141"	"16378"	"16378"	"16366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.4"	""	"253.4"	""	"281.5"	""	"302.3"	"0.4"	"360.3"	"358.6"	""	"425"	"31"	"33.000"	"26.000"	"0.0186362674493023"	"16"	"0.0008453"	"0.008256"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFINLPR"	"[K].iFINLPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"551.35205"	"1101.69682"	"1101.69818"	"-1.23"	"-0.00068"	"5/56"	"5"	"56"	"6610277.75744629"	"HCD"	"MS2"	"8.536522"	"321.6"	"100.000"	"53.7730"	"16417"	"16417"	"16409"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"416.3"	""	"385.7"	""	"450.8"	""	"573.9"	"2.8"	"635.8"	"583.9"	""	"425"	"34"	"33.000"	"26.000"	"0.00851841774958019"	"17"	"0.001217"	"0.01751"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFINLPR"	"[K].iFINLPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"551.35242"	"1101.69756"	"1101.69818"	"-0.57"	"-0.00031"	"5/56"	"5"	"56"	"5310181.70489502"	"HCD"	"MS2"	"0"	"284.6"	"100.000"	"53.5278"	"16266"	"16266"	"16252"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"354.1"	""	"333.2"	""	"373.6"	""	"552.2"	""	"578.6"	"509.7"	""	"518"	"27"	"34.000"	"27.000"	"0.050384826114027"	"20"	"0.0008731"	"0.009467"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGGPLK"	"[K].aTGGPLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P3E0"	"Thymocyte nuclear protein 1 OS=Rattus norvegicus OX=10116 GN=Thyn1 PE=2 SV=1"	"Q6P3E0"	"Thymocyte nuclear protein 1 OS=Rattus norvegicus OX=10116 GN=Thyn1 PE=2 SV=1"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"551.35480"	"1101.70232"	"1101.70322"	"-0.81"	"-0.00045"	"4/48"	"4"	"48"	"836256.96887207"	"HCD"	"MS2"	"0"	"72.0"	"100.000"	"26.9893"	"5543"	"5543"	"5522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.5"	""	"100.2"	""	"93.1"	""	"108.9"	""	"134.3"	"129.6"	""	"504"	"14"	"34.000"	"27.000"	"1.12564265222043"	"24"	"0.007689"	"0.3043"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGGPLK"	"[K].aTGGPLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P3E0"	"Thymocyte nuclear protein 1 OS=Rattus norvegicus OX=10116 GN=Thyn1 PE=2 SV=1"	"Q6P3E0"	"Thymocyte nuclear protein 1 OS=Rattus norvegicus OX=10116 GN=Thyn1 PE=2 SV=1"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"1"	"551.35522"	"1101.70317"	"1101.70322"	"-0.04"	"-0.00002"	"4/48"	"4"	"48"	"909707.229553223"	"HCD"	"MS2"	"0"	"75.9"	"100.000"	"26.9033"	"5472"	"5472"	"5448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.0"	""	"101.1"	""	"103.5"	""	"115.1"	"0.6"	"145.2"	"129.5"	""	"504"	"11"	"34.000"	"27.000"	"1.84247049037821"	"23"	"0.008678"	"0.3795"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIILPFR"	"[K].dIILPFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"551.84442"	"1102.68157"	"1102.68220"	"-0.57"	"-0.00032"	"6/48"	"6"	"48"	"11028474.4244995"	"HCD"	"MS2"	"14.24017"	"373.0"	"84.604"	"57.6296"	"17990"	"17990"	"17973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"466.0"	""	"491.8"	""	"454.3"	""	"649.2"	""	"700.6"	"779.7"	""	"663"	"23"	"35.000"	"28.000"	"0.175988193262573"	"28"	"0.0007076"	"0.00695"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIILPFR"	"[K].dIILPFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"551.84509"	"1102.68291"	"1102.68220"	"0.65"	"0.00036"	"5/48"	"5"	"48"	"10700501.9047241"	"HCD"	"MS2"	"18.12054"	"437.2"	"100.000"	"57.4236"	"17852"	"17852"	"17835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"557.8"	""	"564.6"	""	"540.5"	""	"759.6"	"1.4"	"838.3"	"885.3"	""	"669"	"22"	"35.000"	"28.000"	"0.193818898954792"	"28"	"0.0006737"	"0.00654"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVSFPIR"	"[K].gVVSFPIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"552.34149"	"1103.67571"	"1103.67745"	"-1.58"	"-0.00087"	"11/56"	"11"	"56"	"42691089.2834473"	"HCD"	"MS2"	"0"	"558.8"	"28.828"	"42.8181"	"11926"	"11926"	"11915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"944.6"	""	"1088.6"	""	"673.9"	""	"888.7"	""	"885.5"	"798.2"	""	"477"	"36"	"33.000"	"26.000"	"0.00582758186817513"	"22"	"0.0006737"	"0.006405"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVSFPIR"	"[K].gVVSFPIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"552.34149"	"1103.67571"	"1103.67745"	"-1.58"	"-0.00087"	"6/56"	"6"	"56"	"40752225.8469238"	"HCD"	"MS2"	"4.475927"	"652.4"	"37.036"	"43.0630"	"12070"	"12070"	"12051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1107.5"	""	"1270.0"	""	"775.3"	""	"1048.5"	""	"1039.1"	"924.2"	""	"477"	"34"	"33.000"	"26.000"	"0.00930011638223556"	"19"	"0.0006037"	"0.005288"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVSFPIR"	"[K].gVVSFPIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"552.34204"	"1103.67681"	"1103.67745"	"-0.58"	"-0.00032"	"6/56"	"6"	"56"	"8533022.40679932"	"HCD"	"MS2"	"26.78188"	"484.0"	"97.877"	"43.0516"	"12017"	"12017"	"12010"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"679.3"	""	"771.5"	""	"709.5"	""	"702.8"	""	"856.9"	"873.2"	""	"522"	"24"	"34.000"	"27.000"	"0.112886109900137"	"18"	"0.0004166"	"0.002452"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIAGASK"	"[K].vIAGASk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"552.36273"	"1103.71819"	"1103.71887"	"-0.61"	"-0.00034"	"6/48"	"6"	"48"	"3150911.7310791"	"HCD"	"MS2"	"0"	"243.8"	"100.000"	"30.4704"	"6925"	"6925"	"6901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"316.0"	""	"261.9"	""	"284.7"	""	"488.0"	"1.5"	"469.8"	"491.5"	""	"162"	"19"	"29.000"	"22.000"	"0.10362988563676"	"17"	"0.0007793"	"0.007225"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIAGASK"	"[K].vIAGASk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"552.36304"	"1103.71880"	"1103.71887"	"-0.06"	"-0.00003"	"6/48"	"6"	"48"	"2972829.66845703"	"HCD"	"MS2"	"33.01041"	"238.5"	"100.000"	"30.3967"	"6854"	"6854"	"6826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.9"	""	"255.2"	""	"281.5"	""	"473.0"	""	"470.6"	"505.5"	""	"162"	"27"	"29.000"	"22.000"	"0.0164620917885834"	"17"	"0.0005564"	"0.003442"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDVGFR"	"[K].vAIDVGFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"553.33142"	"1105.65557"	"1105.65671"	"-1.04"	"-0.00057"	"6/56"	"6"	"56"	"10538945.3120117"	"HCD"	"MS2"	"4.628238"	"499.5"	"100.000"	"45.3104"	"12933"	"12933"	"12912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"716.3"	""	"749.7"	""	"778.6"	""	"747.8"	""	"846.9"	"893.8"	""	"490"	"34"	"33.000"	"26.000"	"0.0100268861633853"	"22"	"0.0003839"	"0.002038"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLWTTSR"	"[K].lLWTTSR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1;Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1; Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"553.33142"	"1105.65557"	"1105.65671"	"-1.04"	"-0.00057"	"5/52"	"5"	"52"	"13468537.236084"	"HCD"	"MS2"	"4.023589"	"407.0"	"57.954"	"43.7635"	"12351"	"12351"	"12332"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"493.7"	""	"569.8"	""	"542.0"	""	"637.7"	"2.6"	"767.8"	"847.8"	""	"490"	"25"	"33.000"	"26.000"	"0.0803833468127142"	"23"	"0.002829"	"0.04591"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDVGFR"	"[K].vAIDVGFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"553.33148"	"1105.65569"	"1105.65671"	"-0.93"	"-0.00051"	"6/56"	"6"	"56"	"11145207.6275024"	"HCD"	"MS2"	"5.693432"	"560.5"	"100.000"	"45.5471"	"13079"	"13079"	"13051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"796.0"	""	"853.4"	""	"861.7"	""	"845.8"	"0.5"	"935.4"	"1011.6"	""	"490"	"33"	"33.000"	"26.000"	"0.0133403149946393"	"26"	"0.0003839"	"0.001964"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLWTTSR"	"[K].lLWTTSR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1;Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1; Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"553.33160"	"1105.65593"	"1105.65671"	"-0.70"	"-0.00039"	"5/52"	"5"	"52"	"12285708.2987061"	"HCD"	"MS2"	"0"	"481.9"	"76.158"	"43.5088"	"12198"	"12198"	"12186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"560.1"	""	"703.1"	""	"684.7"	""	"776.8"	"5.8"	"862.9"	"975.7"	""	"510"	"24"	"34.000"	"27.000"	"0.108527595349104"	"23"	"0.001966"	"0.03087"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAFGPGK"	"[R].aAFGPGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O70513"	"Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2"	"O70513"	"Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"553.34235"	"1105.67742"	"1105.67700"	"0.38"	"0.00021"	"5/50"	"5"	"50"	"6993584.71002197"	"HCD"	"MS2"	"35.02515"	"561.3"	"100.000"	"31.8329"	"7440"	"7440"	"7414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"771.6"	""	"745.2"	""	"750.0"	""	"860.3"	""	"1092.3"	"1104.2"	""	"336"	"20"	"32.000"	"25.000"	"0.172309523610236"	"17"	"0.003107"	"0.06143"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAFGPGK"	"[R].aAFGPGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O70513"	"Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2"	"O70513"	"Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"553.34296"	"1105.67864"	"1105.67700"	"1.48"	"0.00082"	"5/50"	"5"	"50"	"7787165.31890869"	"HCD"	"MS2"	"15.52739"	"586.4"	"100.000"	"31.9815"	"7543"	"7543"	"7514"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"792.5"	""	"744.4"	""	"849.3"	""	"834.2"	"1.7"	"1159.2"	"1180.7"	""	"338"	"20"	"32.000"	"25.000"	"0.172936515695447"	"18"	"0.004346"	"0.1224"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWFQGR"	"[K].aLWFQGR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"553.81793"	"1106.62859"	"1106.63083"	"-2.03"	"-0.00112"	"5/54"	"5"	"54"	"8301834.78765869"	"HCD"	"MS2"	"43.53734"	"467.8"	"100.000"	"45.1425"	"12913"	"12913"	"12891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"579.2"	""	"557.9"	""	"535.6"	""	"831.0"	""	"978.3"	"964.0"	""	"654"	"18"	"35.000"	"28.000"	"0.546446630879601"	"19"	"0.001488"	"0.02036"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWFQGR"	"[K].aLWFQGR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"553.81812"	"1106.62895"	"1106.63083"	"-1.70"	"-0.00094"	"5/54"	"5"	"54"	"9522983.79162598"	"HCD"	"MS2"	"37.44885"	"393.5"	"73.268"	"44.8736"	"12754"	"12754"	"12736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"496.2"	""	"434.6"	""	"451.7"	""	"729.5"	""	"795.6"	"830.2"	""	"646"	"23"	"35.000"	"28.000"	"0.168345891686941"	"20"	"0.005792"	"0.1875"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNFAVASR"	"[K].lNFAVASR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"553.82874"	"1106.65019"	"1106.65196"	"-1.59"	"-0.00088"	"6/68"	"6"	"68"	"52474035.0461426"	"HCD"	"MS2"	"48.58084"	"582.0"	"18.780"	"39.6846"	"10648"	"10648"	"10630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"824.0"	""	"767.8"	""	"842.6"	""	"943.2"	""	"1036.2"	"1100.3"	""	"450"	"36"	"33.000"	"26.000"	"0.00553582710933215"	"21"	"0.003818"	"0.09377"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNFAVASR"	"[K].lNFAVASR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"553.82886"	"1106.65044"	"1106.65196"	"-1.37"	"-0.00076"	"6/68"	"6"	"68"	"53541681.9780273"	"HCD"	"MS2"	"45.03796"	"464.7"	"14.284"	"39.8037"	"10738"	"10738"	"10718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"630.7"	""	"620.9"	""	"667.4"	""	"762.3"	""	"850.0"	"876.9"	""	"450"	"36"	"33.000"	"26.000"	"0.00558704948691503"	"21"	"0.00373"	"0.08673"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"554.32074"	"1107.63420"	"1107.63597"	"-1.60"	"-0.00089"	"7/58"	"7"	"58"	"27740723.9599609"	"HCD"	"MS2"	"46.17072"	"829.2"	"53.014"	"44.2980"	"12520"	"12520"	"12502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1098.9"	""	"1120.8"	""	"1091.0"	""	"1401.7"	""	"1562.1"	"1588.7"	""	"540"	"21"	"34.000"	"27.000"	"0.230868012478864"	"23"	"0.0006037"	"0.0061"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"554.32092"	"1107.63457"	"1107.63597"	"-1.27"	"-0.00070"	"7/58"	"7"	"58"	"32688642.2496338"	"HCD"	"MS2"	"39.37753"	"552.2"	"30.642"	"44.5228"	"12661"	"12661"	"12652"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"741.3"	""	"738.5"	""	"704.5"	""	"976.6"	"0.7"	"1016.0"	"1056.2"	""	"540"	"21"	"34.000"	"27.000"	"0.218959485620537"	"24"	"0.00119"	"0.01626"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"554.32092"	"1107.63457"	"1107.63597"	"-1.27"	"-0.00070"	"6/58"	"6"	"58"	"6953968.72705078"	"HCD"	"MS2"	"9.411634"	"371.8"	"100.000"	"44.5775"	"12633"	"12633"	"12616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"537.7"	""	"493.8"	""	"501.0"	""	"616.4"	"5.3"	"647.1"	"720.7"	""	"540"	"36"	"34.000"	"27.000"	"0.00733438602586553"	"22"	"0.0002277"	"0.001141"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"554.32111"	"1107.63494"	"1107.63597"	"-0.94"	"-0.00052"	"6/58"	"6"	"58"	"7105628.89892578"	"HCD"	"MS2"	"17.34982"	"394.5"	"100.000"	"44.8023"	"12774"	"12774"	"12759"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"547.8"	""	"524.1"	""	"532.6"	""	"680.1"	"5.3"	"698.0"	"749.9"	""	"540"	"34"	"34.000"	"27.000"	"0.0113074262581838"	"20"	"0.0004166"	"0.002362"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYLLAGSR"	"[K].vYLLAGSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"554.33899"	"1107.67070"	"1107.67236"	"-1.50"	"-0.00083"	"6/56"	"6"	"56"	"6616185.51538086"	"HCD"	"MS2"	"36.76604"	"423.5"	"100.000"	"40.8503"	"11123"	"11123"	"11093"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"543.0"	""	"537.0"	""	"571.4"	""	"674.5"	""	"818.8"	"873.2"	""	"285"	"27"	"31.000"	"24.000"	"0.029296440992774"	"17"	"0.0003571"	"0.001497"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYLLAGSR"	"[K].vYLLAGSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"554.33905"	"1107.67082"	"1107.67236"	"-1.39"	"-0.00077"	"6/56"	"6"	"56"	"6771723.83526611"	"HCD"	"MS2"	"39.84531"	"395.7"	"100.000"	"40.9856"	"11222"	"11222"	"11197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"527.0"	""	"506.0"	""	"510.2"	""	"628.1"	"0.9"	"779.0"	"803.4"	""	"285"	"27"	"31.000"	"24.000"	"0.0282367601177226"	"18"	"0.0003839"	"0.001564"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLHVALR"	"[R].aVLHVALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"369.91101"	"1107.71848"	"1107.71998"	"-1.35"	"-0.00050"	"6/58"	"6"	"58"	"21784720.1103516"	"HCD"	"MS2"	"2.571401"	"249.3"	"100.000"	"33.0150"	"7924"	"7924"	"7896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.6"	""	"410.8"	""	"408.4"	""	"379.4"	""	"377.3"	"451.8"	""	"35"	"34"	"22.000"	"15.000"	"0.000746514157902787"	"15"	"0.0003839"	"0.001971"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLHVALR"	"[R].aVLHVALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"369.91122"	"1107.71912"	"1107.71998"	"-0.78"	"-0.00029"	"6/58"	"6"	"58"	"14845120.6223145"	"HCD"	"MS2"	"4.307417"	"183.2"	"100.000"	"33.0463"	"7979"	"7979"	"7958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"243.0"	""	"287.4"	""	"302.1"	""	"276.1"	"0.0"	"290.7"	"333.4"	""	"35"	"31"	"22.000"	"15.000"	"0.00128244293299308"	"14"	"0.0003571"	"0.00149"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHENNPR"	"[K].lHENNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"554.80658"	"1108.60588"	"1108.60607"	"-0.17"	"-0.00009"	"5/54"	"5"	"54"	"113335.062561035"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"19.4935"	"2567"	"2567"	"2560"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.1"	""	"3.9"	""	"8.2"	""	"16.0"	""	"11.5"	"10.3"	""	"649"	"15"	"35.000"	"28.000"	"1.12516107971847"	"16"	"0.006814"	"0.2536"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALPYIR"	"[K].fALPYIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"554.83899"	"1108.67070"	"1108.67163"	"-0.84"	"-0.00047"	"5/50"	"5"	"50"	"3661524.78125"	"HCD"	"MS2"	"12.78956"	"188.4"	"100.000"	"56.3528"	"17468"	"17468"	"17445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.2"	""	"255.2"	""	"305.1"	""	"291.1"	"6.1"	"323.1"	"333.8"	""	"247"	"16"	"30.000"	"23.000"	"0.303156551087101"	"19"	"0.0009727"	"0.01062"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALPYIR"	"[K].fALPYIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"554.83917"	"1108.67107"	"1108.67163"	"-0.51"	"-0.00028"	"5/50"	"5"	"50"	"3661580.48156738"	"HCD"	"MS2"	"14.59529"	"191.3"	"100.000"	"56.1426"	"17328"	"17328"	"17307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.8"	""	"261.0"	""	"309.7"	""	"295.7"	"10.4"	"317.9"	"347.9"	""	"246"	"15"	"30.000"	"23.000"	"0.417739085286202"	"18"	"0.003286"	"0.071"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYLFPGH"	"[R].fYLFPGH.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.30237"	"1109.59746"	"1109.59813"	"-0.61"	"-0.00034"	"4/52"	"4"	"52"	"6064189.97131348"	"HCD"	"MS2"	"45.60819"	"160.0"	"100.000"	"59.6576"	"18813"	"18813"	"18789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.8"	""	"213.2"	""	"255.1"	""	"260.8"	"1.1"	"291.4"	"268.0"	""	"662"	"27"	"35.000"	"28.000"	"0.0732534348879467"	"14"	"0.001422"	"0.01938"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYLFPGH"	"[R].fYLFPGH.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.30255"	"1109.59783"	"1109.59813"	"-0.28"	"-0.00015"	"4/52"	"4"	"52"	"5679995.65637207"	"HCD"	"MS2"	"35.55281"	"156.1"	"100.000"	"59.4918"	"18692"	"18692"	"18665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.1"	""	"213.9"	""	"235.4"	""	"248.6"	"1.7"	"292.6"	"289.1"	""	"662"	"24"	"35.000"	"28.000"	"0.123261654770262"	"14"	"0.00109"	"0.01467"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLEGFR"	"[R].lFLEGFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"555.82861"	"1110.64995"	"1110.65090"	"-0.85"	"-0.00047"	"5/48"	"5"	"48"	"3245832.80004883"	"HCD"	"MS2"	"11.18591"	"173.4"	"100.000"	"58.7623"	"18399"	"18399"	"18377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.6"	""	"233.5"	""	"246.3"	""	"292.6"	"0.3"	"314.7"	"323.0"	""	"248"	"22"	"30.000"	"23.000"	"0.0707003697628127"	"15"	"0.0009404"	"0.009804"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLEGFR"	"[R].lFLEGFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"555.82916"	"1110.65105"	"1110.65090"	"0.14"	"0.00008"	"5/48"	"5"	"48"	"2985692.22601318"	"HCD"	"MS2"	"18.67567"	"150.9"	"100.000"	"58.8780"	"18496"	"18496"	"18469"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.5"	""	"193.1"	""	"213.1"	""	"264.6"	""	"292.9"	"280.6"	""	"247"	"19"	"30.000"	"23.000"	"0.162804707211716"	"15"	"0.0006037"	"0.004841"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLFNYR"	"[R].aVLFNYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"556.32587"	"1111.64446"	"1111.64615"	"-1.52"	"-0.00084"	"5/54"	"5"	"54"	"10326563.958374"	"HCD"	"MS2"	"0"	"429.7"	"77.346"	"42.1503"	"11698"	"11698"	"11684"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"764.8"	""	"668.5"	""	"530.9"	""	"731.7"	""	"673.7"	"695.5"	""	"260"	"25"	"31.000"	"24.000"	"0.0436458898515841"	"22"	"0.001966"	"0.03034"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLFNYR"	"[R].aVLFNYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"556.32648"	"1111.64568"	"1111.64615"	"-0.42"	"-0.00023"	"5/54"	"5"	"54"	"6025170.57781982"	"HCD"	"MS2"	"0"	"375.5"	"100.000"	"42.0171"	"11598"	"11598"	"11586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"592.2"	""	"533.5"	""	"487.6"	""	"709.0"	"1.6"	"628.2"	"599.4"	""	"292"	"21"	"31.000"	"24.000"	"0.112034777446826"	"20"	"0.00109"	"0.01477"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLFNYR"	"[R].aVLFNYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"556.32648"	"1111.64568"	"1111.64615"	"-0.42"	"-0.00023"	"5/54"	"5"	"54"	"47183257.4385986"	"HCD"	"MS2"	"0.9583046"	"885.5"	"40.522"	"41.6965"	"11469"	"11469"	"11451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1773.0"	""	"1485.5"	""	"998.0"	""	"1527.3"	""	"1282.5"	"1290.9"	""	"292"	"25"	"31.000"	"24.000"	"0.0412432476337693"	"22"	"0.003286"	"0.07222"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLFNYR"	"[R].aVLFNYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"556.32678"	"1111.64629"	"1111.64615"	"0.13"	"0.00007"	"5/54"	"5"	"54"	"35321041.1499023"	"HCD"	"MS2"	"0.4773935"	"1263.8"	"77.437"	"41.8755"	"11587"	"11587"	"11570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2560.7"	""	"2076.3"	""	"1424.9"	""	"2188.9"	"4.0"	"1837.6"	"1834.8"	""	"292"	"25"	"31.000"	"24.000"	"0.0422039262825359"	"22"	"0.00274"	"0.04374"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQLLLSP"	"[K].lVQLLLSP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P97570"	"85/88 kDa calcium-independent phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g6 PE=1 SV=2"	"P97570"	"85/88 kDa calcium-independent phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.36731"	"1111.72734"	"1111.72881"	"-1.32"	"-0.00073"	"5/56"	"5"	"56"	"241278.757324219"	"HCD"	"MS2"	"36.93895"	"5.7"	"100.000"	"89.2309"	"30784"	"30784"	"30774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"6.4"	""	"9.7"	""	"11.6"	""	"10.6"	"8.9"	""	"103"	"33"	"27.000"	"20.000"	"0.00259302813525771"	"15"	"0.00109"	"0.01467"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQLLLSP"	"[K].lVQLLLSP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P97570"	"85/88 kDa calcium-independent phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g6 PE=1 SV=2"	"P97570"	"85/88 kDa calcium-independent phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.36755"	"1111.72783"	"1111.72881"	"-0.88"	"-0.00049"	"6/56"	"6"	"56"	"238394.803894043"	"HCD"	"MS2"	"25.34019"	"7.5"	"100.000"	"89.1269"	"30702"	"30702"	"30697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"5.8"	""	"9.5"	""	"14.5"	""	"16.5"	"16.4"	""	"103"	"51"	"27.000"	"20.000"	"3.79146655209789E-05"	"16"	"0.000494"	"0.002712"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVLAQIR"	"[R].aLVLAQIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.87122"	"1112.73516"	"1112.73529"	"-0.13"	"-0.00007"	"5/62"	"5"	"62"	"1771295.36499023"	"HCD"	"MS2"	"0"	"167.5"	"100.000"	"43.9170"	"12414"	"12414"	"12384"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"225.7"	""	"212.7"	""	"231.4"	""	"235.9"	"2.4"	"336.8"	"344.9"	""	"103"	"11"	"27.000"	"20.000"	"0.371370351779193"	"13"	"0.004346"	"0.1171"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILLAEGR"	"[R].iILLAEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"557.36255"	"1113.71782"	"1113.71931"	"-1.34"	"-0.00074"	"6/56"	"6"	"56"	"27528621.8633423"	"HCD"	"MS2"	"31.7924"	"1609.6"	"90.678"	"49.9806"	"14882"	"14882"	"14862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2373.2"	""	"2031.6"	""	"2352.2"	""	"2721.6"	""	"2763.9"	"3012.0"	""	"153"	"32"	"28.000"	"21.000"	"0.00504268029861906"	"15"	"0.0006037"	"0.005643"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILLAEGR"	"[R].iILLAEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"557.36273"	"1113.71819"	"1113.71931"	"-1.01"	"-0.00056"	"6/56"	"6"	"56"	"22079552.2642212"	"HCD"	"MS2"	"30.57442"	"1377.7"	"100.000"	"49.7148"	"14727"	"14727"	"14703"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2047.1"	""	"1824.9"	""	"1998.2"	""	"2335.4"	""	"2309.0"	"2534.6"	""	"153"	"29"	"28.000"	"21.000"	"0.0095205367800511"	"14"	"0.0006037"	"0.004609"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPAGGK"	"[R].iLPAGGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"557.37268"	"1113.73808"	"1113.73960"	"-1.36"	"-0.00076"	"5/50"	"5"	"50"	"11681766.9078369"	"HCD"	"MS2"	"0"	"745.9"	"100.000"	"35.8980"	"9094"	"9094"	"9067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1042.7"	""	"985.1"	""	"998.5"	""	"1202.7"	""	"1388.4"	"1462.7"	""	"141"	"14"	"28.000"	"21.000"	"0.28131255616531"	"17"	"0.001846"	"0.02663"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPAGGK"	"[R].iLPAGGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"557.37292"	"1113.73857"	"1113.73960"	"-0.92"	"-0.00051"	"3/50"	"3"	"50"	"10131207.907959"	"HCD"	"MS2"	"0"	"662.5"	"100.000"	"35.9483"	"9158"	"9158"	"9129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"936.8"	""	"884.4"	""	"867.5"	""	"1054.4"	""	"1244.5"	"1299.7"	""	"141"	"13"	"28.000"	"21.000"	"0.386535260269202"	"16"	"0.001783"	"0.02496"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AVIQWIR"	"[].aVIQWIR.[]"	"N-Term(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"557.85028"	"1114.69328"	"1114.69343"	"-0.13"	"-0.00007"	"5/56"	"5"	"56"	"3054687.81347656"	"HCD"	"MS2"	"27.99574"	"178.4"	"100.000"	"48.3095"	"14156"	"14156"	"14128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.3"	""	"253.8"	""	"259.5"	""	"294.3"	"0.5"	"309.7"	"313.8"	""	"397"	"9"	"32.000"	"25.000"	"2.61072129190159"	"20"	"0.0006037"	"0.0061"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITGLGVGR"	"[R].lITGLGVGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"557.85944"	"1114.71160"	"1114.71456"	"-2.66"	"-0.00148"	"6/64"	"6"	"64"	"3153545.28979492"	"HCD"	"MS2"	"32.87759"	"192.2"	"100.000"	"43.7517"	"12297"	"12297"	"12280"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.8"	""	"225.8"	""	"240.3"	""	"331.6"	""	"401.7"	"379.1"	""	"373"	"35"	"32.000"	"25.000"	"0.00633401133381113"	"22"	"0.0001859"	"0.0003442"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAVASLIR"	"[K].vGAVASLIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"557.86011"	"1114.71294"	"1114.71456"	"-1.45"	"-0.00081"	"7/64"	"7"	"64"	"2264808.58966064"	"HCD"	"MS2"	"16.87495"	"145.3"	"100.000"	"46.2711"	"13370"	"13370"	"13344"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.5"	""	"200.0"	""	"192.3"	""	"235.0"	"3.9"	"270.8"	"277.1"	""	"322"	"34"	"32.000"	"25.000"	"0.0069795251420392"	""	"0.0001859"	"0.0003273"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAVASLIR"	"[K].vGAVASLIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"557.86047"	"1114.71367"	"1114.71456"	"-0.80"	"-0.00044"	"7/64"	"7"	"64"	"9050718.5065918"	"HCD"	"MS2"	"0"	"315.7"	"82.602"	"45.7135"	"13093"	"13093"	"13079"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"485.8"	""	"492.3"	""	"490.7"	""	"456.5"	""	"500.5"	"560.9"	""	"322"	"50"	"32.000"	"25.000"	"0.000172514608143254"	""	"0.0001859"	"0.0003236"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITGLGVGR"	"[R].lITGLGVGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"557.86090"	"1114.71453"	"1114.71456"	"-0.03"	"-0.00002"	"7/64"	"7"	"64"	"2976723.55236816"	"HCD"	"MS2"	"0"	"163.3"	"100.000"	"44.0637"	"12474"	"12474"	"12447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"215.1"	""	"193.1"	""	"198.8"	""	"279.6"	"1.8"	"327.4"	"334.4"	""	"322"	"32"	"32.000"	"25.000"	"0.0104912171443796"	"20"	"0.0001308"	"0.0002661"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLSALDR"	"[K].vLLSALDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"558.35272"	"1115.69817"	"1115.69857"	"-0.37"	"-0.00020"	"6/62"	"6"	"62"	"17395464.4344482"	"HCD"	"MS2"	"49.04467"	"472.8"	"58.526"	"49.3342"	"14623"	"14623"	"14606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"586.2"	""	"593.0"	""	"618.0"	""	"805.8"	""	"954.9"	"931.3"	""	"509"	"25"	"34.000"	"27.000"	"0.0856421944060624"	"21"	"0.000523"	"0.003201"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLSELLR"	"[R].rLSELLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"3"	"3"	"0.3125"	"0.0000"	"1"	"1"	"1"	"372.57428"	"1115.70829"	"1115.70981"	"-1.36"	"-0.00051"	"5/62"	"5"	"62"	"12698701.2460327"	"HCD"	"MS2"	"31.12223"	"342.0"	"86.862"	"33.6532"	"8177"	"8177"	"8159"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"541.6"	""	"472.1"	""	"521.2"	""	"539.9"	""	"572.7"	"590.8"	""	"420"	"32"	"33.000"	"26.000"	"0.0141977424832316"	""	"0.001587"	"0.02176"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLSELLR"	"[R].rLSELLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"3"	"3"	"0.2188"	"0.0000"	"1"	"1"	"1"	"372.57446"	"1115.70884"	"1115.70981"	"-0.87"	"-0.00032"	"5/62"	"5"	"62"	"14039968.9729614"	"HCD"	"MS2"	"44.01373"	"313.3"	"68.078"	"33.7014"	"8240"	"8240"	"8222"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"480.4"	""	"437.0"	""	"486.0"	""	"480.0"	""	"519.2"	"569.7"	""	"420"	"32"	"33.000"	"26.000"	"0.0139386044784401"	""	"0.005946"	"0.1997"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLFGLAR"	"[R].lPLFGLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"558.35992"	"1115.71257"	"1115.71383"	"-1.13"	"-0.00063"	"12/58"	"12"	"58"	"13392478.9876709"	"HCD"	"MS2"	"2.617029"	"420.7"	"100.000"	"63.3235"	"20310"	"20310"	"20291"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.3"	""	"370.5"	""	"471.9"	""	"927.7"	""	"892.4"	"912.7"	""	"375"	"28"	"32.000"	"25.000"	"0.030974283716794"	"23"	"0.0004557"	"0.002631"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLFGLAR"	"[R].lPLFGLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"558.36035"	"1115.71343"	"1115.71383"	"-0.36"	"-0.00020"	"12/58"	"12"	"58"	"11889365.2666626"	"HCD"	"MS2"	"6.588139"	"416.7"	"100.000"	"63.2356"	"20221"	"20221"	"20201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"416.0"	""	"398.9"	""	"452.8"	""	"940.2"	""	"858.4"	"898.1"	""	"409"	"27"	"33.000"	"26.000"	"0.0417535409684919"	"23"	"0.0004166"	"0.002233"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIDFSLR"	"[K].hIDFSLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"372.88327"	"1116.63526"	"1116.63631"	"-0.94"	"-0.00035"	"6/52"	"6"	"52"	"4155701.15795898"	"HCD"	"MS2"	"0"	"137.2"	"100.000"	"36.6381"	"9441"	"9441"	"9415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.6"	""	"188.0"	""	"201.4"	""	"232.5"	"0.8"	"263.1"	"248.5"	""	"723"	"12"	"35.000"	"28.000"	"2.0658952715688"	"23"	"0.000523"	"0.002977"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGPGQK"	"[K].aTGPGQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"558.84174"	"1116.67620"	"1116.67773"	"-1.37"	"-0.00077"	"6/50"	"6"	"50"	"791654.224975586"	"HCD"	"MS2"	"0"	"63.6"	"100.000"	"23.0552"	"3952"	"3952"	"3932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.7"	""	"79.2"	""	"86.6"	""	"106.7"	""	"117.5"	"111.2"	""	"770"	"46"	"35.000"	"28.000"	"0.00106527253348343"	"22"	"0.0006037"	"0.004251"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGPGQK"	"[K].aTGPGQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"558.84241"	"1116.67754"	"1116.67773"	"-0.17"	"-0.00010"	"5/50"	"5"	"50"	"565255.774108887"	"HCD"	"MS2"	"0"	"48.0"	"100.000"	"22.9922"	"3893"	"3893"	"3879"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.7"	""	"67.2"	""	"70.7"	""	"84.2"	""	"82.9"	"74.6"	""	"773"	"25"	"35.000"	"28.000"	"0.121940928693429"	"20"	"0.0008453"	"0.008031"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLLAGK"	"[R].aSLLAGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"559.36993"	"1117.73259"	"1117.73452"	"-1.72"	"-0.00096"	"10/48"	"10"	"48"	"24200398.1157227"	"HCD"	"MS2"	"37.05039"	"703.4"	"39.166"	"37.7409"	"9893"	"9893"	"9873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"948.4"	""	"1006.6"	""	"959.3"	""	"1110.7"	""	"1336.3"	"1309.4"	""	"96"	"25"	"26.000"	"19.000"	"0.016339593105648"	""	"0.002361"	"0.03505"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLLAGK"	"[R].aSLLAGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"559.37073"	"1117.73418"	"1117.73452"	"-0.30"	"-0.00017"	"10/48"	"10"	"48"	"21184019.7290039"	"HCD"	"MS2"	"40.16827"	"1025.8"	"64.146"	"37.6381"	"9808"	"9808"	"9784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1385.6"	""	"1467.2"	""	"1380.2"	""	"1632.5"	""	"1936.7"	"1928.5"	""	"96"	"25"	"26.000"	"19.000"	"0.0157848782820472"	""	"0.002953"	"0.05319"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLLAGK"	"[R].aSLLAGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"559.37079"	"1117.73430"	"1117.73452"	"-0.19"	"-0.00011"	"4/48"	"4"	"48"	"10999112.1715698"	"HCD"	"MS2"	"40.6952"	"852.6"	"100.000"	"34.9533"	"8749"	"8749"	"8730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1226.4"	""	"1102.7"	""	"1153.4"	""	"1342.2"	""	"1525.8"	"1736.4"	""	"96"	"10"	"26.000"	"19.000"	"0.502621703064432"	""	"0.005975"	"0.2011"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVATSWLR"	"[K].gVATSWLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"559.82953"	"1118.65178"	"1118.65196"	"-0.16"	"-0.00009"	"6/58"	"6"	"58"	"11715841.4569092"	"HCD"	"MS2"	"31.27265"	"641.0"	"100.000"	"40.5958"	"11018"	"11018"	"10997"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"829.2"	""	"887.5"	""	"916.0"	""	"997.3"	""	"1177.7"	"1274.9"	""	"920"	"24"	"36.000"	"29.000"	"0.182287895757502"	"19"	"0.000494"	"0.002713"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVATSWLR"	"[K].gVATSWLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"559.82965"	"1118.65203"	"1118.65196"	"0.06"	"0.00003"	"6/58"	"6"	"58"	"11009983.2070313"	"HCD"	"MS2"	"13.28868"	"480.9"	"83.202"	"40.8136"	"11151"	"11151"	"11133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"626.2"	""	"699.4"	""	"705.3"	""	"713.5"	""	"875.9"	"941.2"	""	"919"	"26"	"36.000"	"29.000"	"0.110735154448149"	"19"	"0.0003839"	"0.002001"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVIGFAR"	"[K].nIVIGFAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"559.84692"	"1118.68657"	"1118.68834"	"-1.59"	"-0.00089"	"6/72"	"6"	"72"	"4935979.87554932"	"HCD"	"MS2"	"45.0034"	"291.3"	"100.000"	"44.7840"	"12767"	"12767"	"12749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"423.8"	""	"432.6"	""	"435.2"	""	"464.1"	""	"484.9"	"517.3"	""	"401"	"35"	"33.000"	"26.000"	"0.00700026332534565"	"25"	"0.0001889"	"0.000934"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVIGFAR"	"[K].nIVIGFAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"559.84705"	"1118.68682"	"1118.68834"	"-1.37"	"-0.00076"	"6/72"	"6"	"72"	"4563148.63616943"	"HCD"	"MS2"	"40.97584"	"268.3"	"100.000"	"44.5867"	"12637"	"12637"	"12616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"366.9"	""	"380.6"	""	"398.6"	""	"426.9"	""	"459.6"	"511.1"	""	"401"	"39"	"33.000"	"26.000"	"0.00244407414584436"	"24"	"0.0001889"	"0.0009204"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLDLFR"	"[K].lLLDLFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQN6"	"Spermatogenesis-defective protein 39 homolog OS=Rattus norvegicus OX=10116 GN=Vipas39 PE=1 SV=1"	"Q5PQN6"	"Spermatogenesis-defective protein 39 homolog OS=Rattus norvegicus OX=10116 GN=Vipas39 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"559.85974"	"1118.71221"	"1118.71350"	"-1.15"	"-0.00065"	"4/48"	"4"	"48"	"439642.099121094"	"HCD"	"MS2"	"40.84916"	"22.2"	"100.000"	"80.9848"	"27498"	"27498"	"27470"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.1"	""	"27.6"	""	"31.5"	""	"37.2"	""	"44.5"	"38.6"	""	"197"	"13"	"29.000"	"22.000"	"0.492534016952324"	"17"	"0.002804"	"0.04532"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLDLFR"	"[K].lLLDLFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQN6"	"Spermatogenesis-defective protein 39 homolog OS=Rattus norvegicus OX=10116 GN=Vipas39 PE=1 SV=1"	"Q5PQN6"	"Spermatogenesis-defective protein 39 homolog OS=Rattus norvegicus OX=10116 GN=Vipas39 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"559.85992"	"1118.71257"	"1118.71350"	"-0.83"	"-0.00046"	"5/48"	"5"	"48"	"409780.14276123"	"HCD"	"MS2"	"30.47234"	"22.3"	"100.000"	"81.0338"	"27467"	"27467"	"27440"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.7"	""	"31.0"	""	"34.2"	""	"42.1"	""	"41.6"	"37.8"	""	"203"	"22"	"30.000"	"23.000"	"0.0667522704915752"	"17"	"0.004346"	"0.1208"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDFNLIR"	"[R].lDFNLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"560.33948"	"1119.67168"	"1119.67236"	"-0.61"	"-0.00034"	"5/54"	"5"	"54"	"14510802.6714478"	"HCD"	"MS2"	"3.897722"	"563.3"	"82.942"	"57.7514"	"18039"	"18039"	"18021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"948.2"	""	"817.9"	""	"840.5"	""	"840.1"	""	"937.3"	"945.0"	""	"464"	"36"	"33.000"	"26.000"	"0.00637511443519756"	"23"	"0.0007793"	"0.007425"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDFNLIR"	"[R].lDFNLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"560.33984"	"1119.67241"	"1119.67236"	"0.05"	"0.00003"	"5/54"	"5"	"54"	"14215422.0359497"	"HCD"	"MS2"	"3.448405"	"651.1"	"98.778"	"57.5456"	"17901"	"17901"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1095.4"	""	"937.7"	""	"1004.6"	""	"975.0"	"3.1"	"1050.1"	"1089.1"	""	"468"	"36"	"33.000"	"26.000"	"0.00651952353459366"	"23"	"0.0006396"	"0.006283"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIAASGK"	"[R].nIAASGk.[F]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"560.34302"	"1119.67876"	"1119.67740"	"1.22"	"0.00068"	"6/60"	"6"	"60"	"507364.816040039"	"HCD"	"MS2"	"0"	"53.7"	"100.000"	"27.0500"	"5530"	"5530"	"5515"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.3"	""	"74.2"	""	"80.2"	""	"89.4"	""	"94.1"	"92.6"	""	"443"	"5"	"33.000"	"26.000"	"6.75108740202598"	"13"	"0.006471"	"0.2331"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFTQILR"	"[K].lFTQILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"560.35779"	"1119.70830"	"1119.70875"	"-0.40"	"-0.00022"	"5/54"	"5"	"54"	"10308861.9971924"	"HCD"	"MS2"	"10.76282"	"432.1"	"100.000"	"55.1964"	"16941"	"16941"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"511.4"	""	"634.0"	""	"524.8"	""	"709.8"	""	"853.9"	"868.3"	""	"182"	"19"	"29.000"	"22.000"	"0.116423698678335"	""	"0.005353"	"0.165"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFTQILR"	"[K].lFTQILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"560.35834"	"1119.70940"	"1119.70875"	"0.58"	"0.00033"	"5/54"	"5"	"54"	"9377487.17254639"	"HCD"	"MS2"	"13.248"	"344.1"	"100.000"	"54.9047"	"16822"	"16822"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.4"	""	"551.9"	""	"420.2"	""	"607.0"	"2.9"	"623.3"	"616.4"	""	"165"	"14"	"29.000"	"22.000"	"0.356003238382906"	""	"0.005102"	"0.1543"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVGGSLK"	"[K].tVGGSLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A1A5P5"	"LisH domain-containing protein ARMC9 OS=Rattus norvegicus OX=10116 GN=Armc9 PE=2 SV=1"	"A1A5P5"	"LisH domain-containing protein ARMC9 OS=Rattus norvegicus OX=10116 GN=Armc9 PE=2 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"3"	"560.36011"	"1119.71294"	"1119.71378"	"-0.75"	"-0.00042"	"8/56"	"8"	"56"	"5974566.95690918"	"HCD"	"MS2"	"0"	"423.6"	"100.000"	"29.5553"	"6509"	"6509"	"6484"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"572.8"	""	"596.7"	""	"611.8"	""	"717.4"	""	"785.8"	"732.9"	""	"153"	"16"	"28.000"	"21.000"	"0.207329659839649"	"20"	"0.003507"	"0.08072"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFIDALTR"	"[R].gFIDALTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP9"	"Conserved oligomeric Golgi complex subunit 6 OS=Rattus norvegicus OX=10116 GN=Cog6 PE=2 SV=1"	"Q68FP9"	"Conserved oligomeric Golgi complex subunit 6 OS=Rattus norvegicus OX=10116 GN=Cog6 PE=2 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"561.32867"	"1121.65007"	"1121.65162"	"-1.38"	"-0.00078"	"6/62"	"6"	"62"	"3919578.68328857"	"HCD"	"MS2"	"40.74696"	"216.6"	"100.000"	"48.0777"	"14061"	"14061"	"14037"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"317.2"	"2.5"	"297.7"	""	"312.6"	""	"315.0"	""	"399.0"	"412.0"	""	"488"	"7"	"33.000"	"26.000"	"4.48115355776996"	"18"	"0.0004166"	"0.002153"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFIDALTR"	"[R].gFIDALTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP9"	"Conserved oligomeric Golgi complex subunit 6 OS=Rattus norvegicus OX=10116 GN=Cog6 PE=2 SV=1"	"Q68FP9"	"Conserved oligomeric Golgi complex subunit 6 OS=Rattus norvegicus OX=10116 GN=Cog6 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"561.33020"	"1121.65312"	"1121.65162"	"1.34"	"0.00075"	"6/62"	"6"	"62"	"4137147.26831055"	"HCD"	"MS2"	"57.74627"	"228.9"	"100.000"	"48.3480"	"14219"	"14219"	"14197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"317.0"	""	"317.0"	""	"323.1"	""	"342.4"	""	"420.3"	"451.9"	""	"444"	"9"	"33.000"	"26.000"	"2.84022649522971"	"19"	"0.001217"	"0.01813"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INLIAPPR"	"[K].iNLIAPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"561.86255"	"1122.71782"	"1122.71964"	"-1.62"	"-0.00091"	"7/70"	"7"	"70"	"8037764.64361572"	"HCD"	"MS2"	"0"	"396.9"	"100.000"	"42.8339"	"11932"	"11932"	"11915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"559.4"	""	"519.8"	""	"565.4"	""	"616.3"	"3.3"	"753.6"	"743.5"	""	"81"	"24"	"26.000"	"19.000"	"0.0149780412811008"	""	"0.0009727"	"0.01053"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDMLNR"	"[R].vFDMLNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"562.30969"	"1123.61211"	"1123.61313"	"-0.91"	"-0.00051"	"5/50"	"5"	"50"	"15266411.4169922"	"HCD"	"MS2"	"21.27688"	"362.0"	"52.340"	"49.2995"	"14608"	"14608"	"14590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"595.3"	""	"515.3"	""	"528.7"	""	"404.9"	""	"669.0"	"716.7"	""	"671"	"27"	"35.000"	"28.000"	"0.0694532422519394"	"20"	"0.00103"	"0.01251"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDMLNR"	"[R].vFDMLNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"562.30975"	"1123.61223"	"1123.61313"	"-0.80"	"-0.00045"	"5/50"	"5"	"50"	"17777728.8774414"	"HCD"	"MS2"	"29.41788"	"401.0"	"47.654"	"48.9899"	"14434"	"14434"	"14415"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"653.4"	""	"563.5"	""	"606.4"	""	"427.7"	""	"741.8"	"807.2"	""	"671"	"27"	"35.000"	"28.000"	"0.0709075572865194"	"23"	"0.001718"	"0.02343"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTTGFSR"	"[K].iLTTGFSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"562.33704"	"1123.66680"	"1123.66727"	"-0.43"	"-0.00024"	"6/64"	"6"	"64"	"39878469.4714355"	"HCD"	"MS2"	"33.71962"	"1037.4"	"47.729"	"40.5131"	"10984"	"10984"	"10965"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1503.2"	""	"1361.4"	""	"1387.5"	""	"1649.5"	""	"1905.0"	"2036.9"	""	"294"	"21"	"31.000"	"24.000"	"0.107230254007422"	"20"	"0.0009404"	"0.009713"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTTGFSR"	"[K].iLTTGFSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"562.33728"	"1123.66728"	"1123.66727"	"0.01"	"0.00000"	"6/64"	"6"	"64"	"49579373.7595215"	"HCD"	"MS2"	"22.65015"	"795.2"	"31.716"	"40.6922"	"11102"	"11102"	"11085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1243.6"	""	"1010.4"	""	"1062.1"	""	"1264.2"	""	"1463.4"	"1499.3"	""	"305"	"21"	"31.000"	"24.000"	"0.120856452898272"	"20"	"0.00103"	"0.01228"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAWHVIR"	"[K].iAWHVIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQV9"	"Carboxypeptidase B2 OS=Rattus norvegicus OX=10116 GN=Cpb2 PE=2 SV=1"	"Q9EQV9"	"Carboxypeptidase B2 OS=Rattus norvegicus OX=10116 GN=Cpb2 PE=2 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"375.23575"	"1123.69269"	"1123.69376"	"-0.95"	"-0.00036"	"6/50"	"6"	"50"	"8369197.18927002"	"HCD"	"MS2"	"3.029829"	"170.2"	"100.000"	"36.7480"	"9486"	"9486"	"9462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"253.6"	""	"291.0"	""	"239.0"	""	"277.6"	"1.0"	"261.9"	"284.6"	""	"163"	"28"	"29.000"	"22.000"	"0.0117262084127851"	"17"	"0.0006037"	"0.006062"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAWHVIR"	"[K].iAWHVIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQV9"	"Carboxypeptidase B2 OS=Rattus norvegicus OX=10116 GN=Cpb2 PE=2 SV=1"	"Q9EQV9"	"Carboxypeptidase B2 OS=Rattus norvegicus OX=10116 GN=Cpb2 PE=2 SV=1"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"375.23602"	"1123.69352"	"1123.69376"	"-0.22"	"-0.00008"	"6/50"	"6"	"50"	"7115874.04437256"	"HCD"	"MS2"	"18.59524"	"154.5"	"100.000"	"36.5949"	"9380"	"9380"	"9354"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.3"	""	"252.4"	""	"205.6"	""	"264.5"	""	"232.0"	"251.8"	""	"159"	"33"	"29.000"	"22.000"	"0.00407724800273135"	"18"	"0.0006037"	"0.004783"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFFLQVK"	"[KR].LFFLQVk.[E]"	"K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.35693"	"1123.70659"	"1123.70768"	"-0.97"	"-0.00055"	"6/54"	"6"	"54"	"3231729.32550049"	"HCD"	"MS2"	"30.2045"	"121.3"	"100.000"	"57.3390"	"17871"	"17871"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.9"	""	"152.7"	""	"172.5"	""	"220.2"	"3.5"	"213.1"	"221.7"	""	"118"	"42"	"27.000"	"20.000"	"0.000341076667969374"	"15"	"0.008122"	"0.34"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGMFWLR"	"[R].sGMFWLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"3"	"563.30737"	"1125.60747"	"1125.60765"	"-0.16"	"-0.00009"	"6/48"	"6"	"48"	"5284384.36401367"	"HCD"	"MS2"	"20.6911"	"283.6"	"100.000"	"52.3927"	"15816"	"15816"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.2"	""	"435.2"	""	"411.9"	""	"378.8"	""	"518.6"	"580.9"	""	"491"	"10"	"33.000"	"26.000"	"2.22357353520508"	"18"	"0.00103"	"0.01179"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGMFWLR"	"[R].sGMFWLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"3"	"563.30762"	"1125.60796"	"1125.60765"	"0.27"	"0.00015"	"6/48"	"6"	"48"	"5295600.70526123"	"HCD"	"MS2"	"21.64902"	"303.2"	"100.000"	"52.5655"	"15937"	"15937"	"15910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"383.8"	""	"435.1"	""	"476.6"	""	"417.7"	"2.1"	"551.5"	"606.4"	""	"495"	"12"	"33.000"	"26.000"	"1.43078771732915"	"19"	"0.00103"	"0.01245"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIMGIGHR"	"[K].lIMGIGHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"375.89658"	"1125.67517"	"1125.67640"	"-1.09"	"-0.00041"	"11/58"	"11"	"58"	"15007562.8913574"	"HCD"	"MS2"	"13.02164"	"191.3"	"100.000"	"34.8959"	"8726"	"8726"	"8698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"293.1"	""	"295.9"	""	"324.3"	""	"210.5"	"1.6"	"304.8"	"379.2"	""	"259"	"38"	"31.000"	"24.000"	"0.00221446983304192"	""	"0.0001889"	"0.0004044"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIMGIGHR"	"[K].lIMGIGHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"375.89664"	"1125.67536"	"1125.67640"	"-0.93"	"-0.00035"	"7/58"	"7"	"58"	"15386625.166748"	"HCD"	"MS2"	"6.749734"	"185.2"	"97.841"	"34.8432"	"8661"	"8661"	"8638"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.6"	""	"283.7"	""	"311.8"	""	"201.5"	"0.6"	"307.9"	"367.4"	""	"252"	"33"	"31.000"	"24.000"	"0.00601686884808691"	""	"0.0001889"	"0.0009207"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAQILIR"	"[RK].sPAQILIR.[WF]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q5U1Y4"	"1,5-anhydro-D-fructose reductase OS=Rattus norvegicus OX=10116 GN=Akr1e2 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"563.86053"	"1126.71379"	"1126.71456"	"-0.68"	"-0.00038"	"5/64"	"5"	"64"	"27465050.9343262"	"HCD"	"MS2"	"42.0098"	"317.7"	"30.267"	"41.0637"	"11210"	"11210"	"11189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.8"	""	"446.3"	""	"496.8"	""	"452.9"	""	"605.2"	"543.3"	""	"152"	"13"	"28.000"	"21.000"	"0.392476440646774"	"18"	"0.006657"	"0.2468"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAQILLR"	"[RK].sPAQILLR.[WF]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"563.86053"	"1126.71379"	"1126.71456"	"-0.68"	"-0.00038"	"5/64"	"5"	"64"	"27465050.9343262"	"HCD"	"MS2"	"42.0098"	"317.7"	"30.267"	"41.0637"	"11210"	"11210"	"11189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.8"	""	"446.3"	""	"496.8"	""	"452.9"	""	"605.2"	"543.3"	""	"152"	"13"	"28.000"	"21.000"	"0.392476440646774"	"18"	"0.006657"	"0.2468"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAQILIR"	"[RK].sPAQILIR.[WF]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q5U1Y4"	"1,5-anhydro-D-fructose reductase OS=Rattus norvegicus OX=10116 GN=Akr1e2 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"563.86115"	"1126.71501"	"1126.71456"	"0.40"	"0.00023"	"4/64"	"4"	"64"	"24137632.6564941"	"HCD"	"MS2"	"38.91693"	"448.9"	"46.978"	"41.2425"	"11327"	"11327"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"633.4"	""	"663.3"	""	"670.5"	""	"668.6"	"3.0"	"829.6"	"782.6"	""	"157"	"10"	"28.000"	"21.000"	"0.88078448662704"	"17"	"0.005008"	"0.1515"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAQILLR"	"[RK].sPAQILLR.[WF]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"563.86115"	"1126.71501"	"1126.71456"	"0.40"	"0.00023"	"4/64"	"4"	"64"	"24137632.6564941"	"HCD"	"MS2"	"38.91693"	"448.9"	"46.978"	"41.2425"	"11327"	"11327"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"633.4"	""	"663.3"	""	"670.5"	""	"668.6"	"3.0"	"829.6"	"782.6"	""	"157"	"10"	"28.000"	"21.000"	"0.88078448662704"	"17"	"0.005008"	"0.1515"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFFLTTR"	"[K].nFFLTTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"564.32300"	"1127.63872"	"1127.64106"	"-2.08"	"-0.00117"	"5/62"	"5"	"62"	"13102675.3450317"	"HCD"	"MS2"	"0"	"540.0"	"80.390"	"42.8776"	"11949"	"11949"	"11939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"730.3"	""	"766.1"	""	"782.1"	""	"898.7"	""	"962.9"	"977.9"	""	"399"	"22"	"32.000"	"26.000"	"0.126457007395757"	"22"	"0.002829"	"0.04776"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFFLTTR"	"[K].nFFLTTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"564.32306"	"1127.63884"	"1127.64106"	"-1.97"	"-0.00111"	"5/62"	"5"	"62"	"22297509.196228"	"HCD"	"MS2"	"10.27957"	"873.4"	"78.765"	"43.1499"	"12106"	"12106"	"12091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1202.5"	""	"1294.2"	""	"1301.7"	""	"1352.8"	""	"1498.0"	"1620.5"	""	"399"	"24"	"32.000"	"26.000"	"0.0816475016161372"	"20"	"0.00317"	"0.0643"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFFLTTR"	"[K].nFFLTTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"564.32324"	"1127.63921"	"1127.64106"	"-1.64"	"-0.00093"	"6/62"	"6"	"62"	"8723125.23828125"	"HCD"	"MS2"	"25.51837"	"271.4"	"63.290"	"43.4246"	"12213"	"12213"	"12202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"373.5"	""	"384.4"	""	"414.2"	""	"406.1"	""	"487.0"	"505.4"	""	"399"	"12"	"32.000"	"26.000"	"1.37386133120683"	"15"	"0.003286"	"0.07522"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFFLTTR"	"[K].nFFLTTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"564.32361"	"1127.63994"	"1127.64106"	"-0.99"	"-0.00056"	"5/62"	"5"	"62"	"12198312.2387695"	"HCD"	"MS2"	"15.60365"	"403.1"	"69.175"	"43.1355"	"12048"	"12048"	"12041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"558.3"	""	"592.2"	""	"592.5"	""	"611.4"	"2.2"	"712.5"	"748.9"	""	"422"	"25"	"33.000"	"26.000"	"0.0647563639550535"	"18"	"0.002361"	"0.03436"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIFLLHR"	"[R].tIFLLHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"376.90747"	"1128.70786"	"1128.70908"	"-1.08"	"-0.00041"	"7/48"	"7"	"48"	"4954290.5479126"	"HCD"	"MS2"	"28.45184"	"230.2"	"100.000"	"39.5055"	"10618"	"10618"	"10590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"333.0"	""	"315.2"	""	"375.3"	""	"353.3"	""	"398.6"	"406.6"	""	"370"	"17"	"32.000"	"25.000"	"0.356592108940323"	"14"	"0.00103"	"0.01116"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIFLLHR"	"[R].tIFLLHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"376.90784"	"1128.70896"	"1128.70908"	"-0.11"	"-0.00004"	"7/48"	"7"	"48"	"4925531.81713867"	"HCD"	"MS2"	"39.36126"	"242.4"	"100.000"	"39.3984"	"10531"	"10531"	"10502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"347.4"	""	"331.1"	""	"407.9"	""	"377.9"	""	"395.4"	"435.6"	""	"370"	"17"	"32.000"	"25.000"	"0.364898206181248"	"14"	"0.0006037"	"0.004028"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"564.86005"	"1128.71282"	"1128.71411"	"-1.15"	"-0.00065"	"10/56"	"10"	"56"	"4526586.93536377"	"HCD"	"MS2"	"21.60299"	"356.9"	"100.000"	"26.6670"	"5375"	"5375"	"5358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"541.9"	""	"382.0"	""	"396.5"	""	"627.8"	""	"736.5"	"706.3"	""	"361"	"25"	"32.000"	"25.000"	"0.0640438167566604"	"24"	"0.0006396"	"0.006366"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"564.86029"	"1128.71330"	"1128.71411"	"-0.72"	"-0.00041"	"10/56"	"10"	"56"	"5026419.27978516"	"HCD"	"MS2"	"19.13739"	"376.4"	"100.000"	"26.7301"	"5438"	"5438"	"5413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"564.5"	""	"429.9"	""	"437.7"	""	"627.5"	""	"771.0"	"744.4"	""	"361"	"25"	"32.000"	"25.000"	"0.0556515425020009"	"22"	"0.0006037"	"0.003853"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"377.21649"	"1129.63492"	"1129.63659"	"-1.48"	"-0.00056"	"5/58"	"5"	"58"	"703657.84954834"	"HCD"	"MS2"	"25.21791"	"68.8"	"100.000"	"19.5145"	"2574"	"2574"	"2568"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.2"	""	"91.0"	""	"99.0"	""	"150.9"	""	"106.8"	"119.5"	""	"525"	"19"	"34.000"	"27.000"	"0.363186174480093"	"14"	"0.0003146"	"0.001435"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTNLHR"	"[R].iFTNLHR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"377.22702"	"1129.66651"	"1129.66794"	"-1.27"	"-0.00048"	"8/54"	"8"	"54"	"10940469.1643066"	"HCD"	"MS2"	"29.24626"	"516.4"	"100.000"	"33.0555"	"7983"	"7983"	"7958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"525.8"	""	"555.4"	""	"621.4"	""	"1050.1"	""	"1121.4"	"1038.0"	""	"584"	"11"	"34.000"	"27.000"	"2.2252707092742"	"13"	"0.002361"	"0.03467"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTNLHR"	"[R].iFTNLHR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"377.22705"	"1129.66660"	"1129.66794"	"-1.19"	"-0.00045"	"6/54"	"6"	"54"	"7659157.17443848"	"HCD"	"MS2"	"26.86732"	"290.4"	"100.000"	"32.9646"	"7903"	"7903"	"7880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.2"	""	"367.0"	""	"371.2"	""	"532.3"	""	"570.6"	"572.0"	""	"584"	"17"	"34.000"	"27.000"	"0.544982869723724"	"14"	"0.0006037"	"0.005552"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGAVAK"	"[R].iLGAVAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"565.38867"	"1129.77007"	"1129.77090"	"-0.74"	"-0.00042"	"6/50"	"6"	"50"	"17955636.8708496"	"HCD"	"MS2"	"4.213365"	"329.9"	"27.250"	"40.8617"	"11127"	"11127"	"11109"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"420.7"	""	"431.0"	""	"431.9"	""	"566.0"	""	"615.5"	"666.7"	""	"59"	"35"	"24.000"	"17.000"	"0.000905361486575391"	""	"0.00119"	"0.01622"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGAVAK"	"[R].iLGAVAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"565.38898"	"1129.77068"	"1129.77090"	"-0.20"	"-0.00011"	"6/50"	"6"	"50"	"47964873.7398682"	"HCD"	"MS2"	"24.34745"	"1460.6"	"51.491"	"40.7312"	"11118"	"11118"	"11101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1947.0"	""	"1965.5"	""	"1932.1"	""	"2522.5"	""	"2650.7"	"2841.1"	""	"59"	"36"	"24.000"	"17.000"	"0.00072580844322355"	""	"0.003286"	"0.07047"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGAVAK"	"[R].iLGAVAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"565.38904"	"1129.77080"	"1129.77090"	"-0.09"	"-0.00005"	"6/50"	"6"	"50"	"33968799.3874512"	"HCD"	"MS2"	"45.82483"	"1524.2"	"69.207"	"40.5498"	"10999"	"10999"	"10981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2046.7"	""	"2083.3"	""	"2031.4"	""	"2633.6"	""	"2765.2"	"2897.3"	""	"59"	"36"	"24.000"	"17.000"	"0.000803196885882985"	""	"0.002925"	"0.05087"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGAVAK"	"[R].iLGAVAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"565.38916"	"1129.77104"	"1129.77090"	"0.13"	"0.00007"	"12/50"	"12"	"50"	"11261339.4447632"	"HCD"	"MS2"	"9.758026"	"729.8"	"100.000"	"41.0545"	"11250"	"11250"	"11229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"936.3"	""	"981.9"	""	"969.2"	""	"1210.5"	"2.5"	"1384.2"	"1436.3"	""	"59"	"29"	"24.000"	"17.000"	"0.00369676646607718"	""	"0.001966"	"0.02883"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGILANK"	"[K].gGILANk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.86859"	"1130.72991"	"1130.72976"	"0.13"	"0.00007"	"6/52"	"6"	"52"	"6742744.52648926"	"HCD"	"MS2"	"38.60332"	"566.4"	"100.000"	"33.7060"	"8242"	"8242"	"8222"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"797.3"	""	"783.7"	""	"804.5"	""	"900.0"	"13.1"	"1090.4"	"978.1"	""	"349"	"19"	"32.000"	"25.000"	"0.229506733217546"	"14"	"0.00103"	"0.01215"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNVGGK"	"[R].vVNVGGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51146"	"Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"P51146"	"Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"565.86914"	"1130.73100"	"1130.72976"	"1.10"	"0.00062"	"5/58"	"5"	"58"	"2091366.19744873"	"HCD"	"MS2"	"8.22278"	"196.5"	"100.000"	"32.7827"	"7871"	"7871"	"7846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.2"	""	"239.9"	""	"280.4"	""	"305.2"	""	"399.0"	"327.4"	""	"348"	"14"	"32.000"	"25.000"	"0.727024837965122"	"14"	"0.0006737"	"0.006565"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ALWLPMGD"	"[K].aLWLPMGD.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"566.30652"	"1131.60576"	"1131.60698"	"-1.08"	"-0.00061"	"4/58"	"4"	"58"	"571952.380432129"	"HCD"	"MS2"	"17.46068"	"13.0"	"100.000"	"80.6256"	"27300"	"27300"	"27281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.6"	""	"12.9"	""	"17.0"	""	"21.3"	""	"24.8"	"30.6"	""	"673"	"18"	"35.000"	"28.000"	"0.505807271589292"	""	"0.0008731"	"0.009507"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ALWLPMGD"	"[K].aLWLPMGD.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"566.30658"	"1131.60588"	"1131.60698"	"-0.97"	"-0.00055"	"4/58"	"4"	"58"	"585872.884399414"	"HCD"	"MS2"	"14.19823"	"14.5"	"100.000"	"80.6085"	"27344"	"27344"	"27327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.4"	""	"20.3"	""	"25.5"	""	"24.7"	""	"20.7"	"31.9"	""	"673"	"19"	"35.000"	"28.000"	"0.459182225462173"	"22"	"0.001007"	"0.01094"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ALWLPMGD"	"[K].aLWLPMGD.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"566.30664"	"1131.60600"	"1131.60698"	"-0.86"	"-0.00049"	"4/58"	"4"	"58"	"660063.528442383"	"HCD"	"MS2"	"36.45975"	"17.4"	"100.000"	"80.2840"	"27161"	"27161"	"27137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.4"	""	"19.6"	""	"23.0"	""	"29.0"	""	"32.9"	"36.1"	""	"667"	"21"	"35.000"	"28.000"	"0.279959905504219"	"23"	"0.0009404"	"0.009657"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGWGNLR"	"[R].vTGWGNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"566.32703"	"1131.64678"	"1131.64721"	"-0.38"	"-0.00022"	"5/60"	"5"	"60"	"12320093.220459"	"HCD"	"MS2"	"35.11755"	"517.1"	"70.255"	"39.1943"	"10447"	"10447"	"10422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"756.3"	""	"730.8"	""	"699.1"	""	"820.9"	""	"925.2"	"973.0"	""	"919"	"21"	"36.000"	"29.000"	"0.397452758677431"	"19"	"0.001686"	"0.02289"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGWGNLR"	"[R].vTGWGNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"566.32715"	"1131.64702"	"1131.64721"	"-0.17"	"-0.00009"	"6/60"	"6"	"60"	"12002909.5258789"	"HCD"	"MS2"	"40.22861"	"578.5"	"79.785"	"39.3013"	"10534"	"10534"	"10510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"838.5"	""	"786.9"	""	"780.0"	""	"942.2"	""	"1086.1"	"1053.5"	""	"919"	"17"	"36.000"	"29.000"	"0.93172020962003"	"19"	"0.001454"	"0.01982"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIALDGK"	"[R].gIALDGk.[LI]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	""	""	"P15887"	"S-arrestin OS=Rattus norvegicus OX=10116 GN=Sag PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"566.35986"	"1131.71245"	"1131.71378"	"-1.18"	"-0.00067"	"6/48"	"6"	"48"	"6174880.55578613"	"HCD"	"MS2"	"29.18142"	"560.3"	"100.000"	"36.5582"	"9365"	"9365"	"9338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"737.4"	""	"756.0"	""	"773.2"	""	"968.9"	"8.3"	"1018.6"	"1047.1"	""	"340"	"24"	"32.000"	"25.000"	"0.065833799636675"	"24"	"0.00103"	"0.01248"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLALDGK"	"[R].gLALDGk.[LI]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"566.35986"	"1131.71245"	"1131.71378"	"-1.18"	"-0.00067"	"6/48"	"6"	"48"	"6174880.55578613"	"HCD"	"MS2"	"29.18142"	"560.3"	"100.000"	"36.5582"	"9365"	"9365"	"9338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"737.4"	""	"756.0"	""	"773.2"	""	"968.9"	"8.3"	"1018.6"	"1047.1"	""	"340"	"24"	"32.000"	"25.000"	"0.065833799636675"	"24"	"0.00103"	"0.01248"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIALDGK"	"[R].gIALDGk.[LI]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	""	""	"P15887"	"S-arrestin OS=Rattus norvegicus OX=10116 GN=Sag PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"566.36011"	"1131.71294"	"1131.71378"	"-0.74"	"-0.00042"	"6/48"	"6"	"48"	"7162231.11737061"	"HCD"	"MS2"	"44.67521"	"563.4"	"100.000"	"36.6770"	"9457"	"9457"	"9431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"688.2"	""	"708.2"	""	"698.5"	""	"1009.0"	""	"1082.5"	"1161.4"	""	"340"	"13"	"32.000"	"25.000"	"0.768155105437369"	"21"	"0.001686"	"0.02329"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLALDGK"	"[R].gLALDGk.[LI]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"566.36011"	"1131.71294"	"1131.71378"	"-0.74"	"-0.00042"	"6/48"	"6"	"48"	"7162231.11737061"	"HCD"	"MS2"	"44.67521"	"563.4"	"100.000"	"36.6770"	"9457"	"9457"	"9431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"688.2"	""	"708.2"	""	"698.5"	""	"1009.0"	""	"1082.5"	"1161.4"	""	"340"	"13"	"32.000"	"25.000"	"0.768155105437369"	"21"	"0.001686"	"0.02329"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADVGK"	"[R].lAADVGk.[AG]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"566.36017"	"1131.71306"	"1131.71378"	"-0.64"	"-0.00036"	"6/48"	"6"	"48"	"8637933.05059814"	"HCD"	"MS2"	"24.79051"	"644.8"	"99.187"	"34.6802"	"8637"	"8637"	"8618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"758.2"	""	"881.1"	""	"859.9"	""	"1035.1"	""	"1258.9"	"1330.7"	""	"340"	"30"	"32.000"	"25.000"	"0.0165748238411956"	"23"	"0.0006037"	"0.00504"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADVGK"	"[R].lAADVGk.[AG]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"566.36060"	"1131.71391"	"1131.71378"	"0.12"	"0.00007"	"6/48"	"6"	"48"	"8755194.590271"	"HCD"	"MS2"	"21.60344"	"637.3"	"97.969"	"34.6482"	"8581"	"8581"	"8563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"797.0"	""	"869.2"	""	"822.8"	""	"1010.5"	"6.7"	"1222.0"	"1318.5"	""	"336"	"26"	"32.000"	"25.000"	"0.0407670495973846"	"23"	"0.0007076"	"0.006773"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVTVIGK"	"[K].gVTVIGk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M887"	"Trafficking protein particle complex subunit 13 OS=Rattus norvegicus OX=10116 GN=Trappc13 PE=2 SV=2"	"Q5M887"	"Trafficking protein particle complex subunit 13 OS=Rattus norvegicus OX=10116 GN=Trappc13 PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"566.37842"	"1131.74956"	"1131.75017"	"-0.54"	"-0.00030"	"6/48"	"6"	"48"	"4350142.32495117"	"HCD"	"MS2"	"38.10239"	"354.6"	"100.000"	"35.6620"	"8997"	"8997"	"8971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"459.8"	""	"463.1"	""	"479.0"	""	"581.4"	"5.3"	"693.6"	"681.0"	""	"55"	"15"	"24.000"	"17.000"	"0.0916922635098896"	""	"0.002297"	"0.03353"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVVALGK"	"[R].sVVALGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3MIE0"	"Enoyl-CoA hydratase domain-containing protein 3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echdc3 PE=2 SV=1"	"Q3MIE0"	"Enoyl-CoA hydratase domain-containing protein 3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echdc3 PE=2 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"566.37848"	"1131.74968"	"1131.75017"	"-0.43"	"-0.00024"	"6/48"	"6"	"48"	"5342368.4944458"	"HCD"	"MS2"	"51.95777"	"469.7"	"100.000"	"36.5144"	"9347"	"9347"	"9322"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"632.1"	""	"672.9"	""	"676.3"	""	"745.3"	""	"850.6"	"873.2"	""	"55"	"23"	"24.000"	"17.000"	"0.0150776165353235"	""	"0.003788"	"0.08865"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLSGPYR"	"[R].gGPLSGPYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"566.81915"	"1132.63103"	"1132.63122"	"-0.17"	"-0.00010"	"5/64"	"5"	"64"	"1465710.65905762"	"HCD"	"MS2"	"33.19423"	"121.8"	"100.000"	"30.7868"	"7014"	"7014"	"6984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.8"	""	"120.5"	""	"135.2"	""	"169.7"	""	"191.2"	"346.7"	""	"817"	"15"	"36.000"	"29.000"	"1.35891427520601"	"19"	"0.001217"	"0.01723"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLSGPYR"	"[R].gGPLSGPYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"566.81964"	"1132.63201"	"1132.63122"	"0.69"	"0.00039"	"5/64"	"5"	"64"	"2059895.52874756"	"HCD"	"MS2"	"58.28349"	"154.6"	"100.000"	"30.8257"	"7071"	"7071"	"7040"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"259.3"	""	"148.9"	""	"152.9"	""	"197.4"	""	"232.2"	"480.7"	""	"814"	"22"	"36.000"	"29.000"	"0.23855823295721"	"14"	"0.0009404"	"0.009996"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FILIQNR"	"[R].fILIQNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P62744"	"AP-2 complex subunit sigma OS=Rattus norvegicus OX=10116 GN=Ap2s1 PE=1 SV=1"	"P62744"	"AP-2 complex subunit sigma OS=Rattus norvegicus OX=10116 GN=Ap2s1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"566.85498"	"1132.70268"	"1132.70399"	"-1.16"	"-0.00066"	"5/54"	"5"	"54"	"9654830.00866699"	"HCD"	"MS2"	"15.26555"	"526.1"	"90.311"	"45.9823"	"13252"	"13252"	"13237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"675.6"	""	"703.1"	""	"722.3"	""	"883.9"	""	"1013.1"	"994.2"	""	"272"	"20"	"31.000"	"24.000"	"0.126339428602071"	"24"	"0.001846"	"0.02664"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FILIQNR"	"[R].fILIQNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P62744"	"AP-2 complex subunit sigma OS=Rattus norvegicus OX=10116 GN=Ap2s1 PE=1 SV=1"	"P62744"	"AP-2 complex subunit sigma OS=Rattus norvegicus OX=10116 GN=Ap2s1 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"566.85516"	"1132.70305"	"1132.70399"	"-0.83"	"-0.00047"	"5/54"	"5"	"54"	"10691000.8606567"	"HCD"	"MS2"	"15.00293"	"637.9"	"100.000"	"45.7091"	"13092"	"13092"	"13079"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"833.8"	""	"842.0"	""	"834.1"	""	"1050.4"	""	"1226.0"	"1267.6"	""	"272"	"22"	"31.000"	"24.000"	"0.0915248252546672"	""	"0.004819"	"0.1424"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGAVAGK"	"[K].tAGAVAGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"566.85730"	"1132.70732"	"1132.70903"	"-1.51"	"-0.00085"	"7/56"	"7"	"56"	"1020732.8973999"	"HCD"	"MS2"	"21.74488"	"86.6"	"100.000"	"26.2979"	"5224"	"5224"	"5202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.2"	""	"120.1"	""	"126.8"	""	"127.4"	""	"176.1"	"159.0"	""	"248"	"44"	"30.000"	"23.000"	"0.000519304020746219"	""	"0.0001308"	"0.0002823"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGAVAGK"	"[K].tAGAVAGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"566.85760"	"1132.70793"	"1132.70903"	"-0.97"	"-0.00055"	"7/56"	"7"	"56"	"1372696.33843994"	"HCD"	"MS2"	"48.17825"	"109.2"	"100.000"	"26.3515"	"5283"	"5283"	"5256"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.2"	""	"140.5"	""	"162.9"	""	"167.5"	"2.4"	"200.4"	"205.6"	""	"248"	"44"	"30.000"	"23.000"	"0.000490254608884479"	""	"0.0001859"	"0.0003414"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITGANAK"	"[K].iTGANAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"566.85760"	"1132.70793"	"1132.70903"	"-0.97"	"-0.00055"	"6/52"	"6"	"52"	"5552809.51977539"	"HCD"	"MS2"	"10.75361"	"419.8"	"100.000"	"27.7542"	"5850"	"5850"	"5825"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"651.5"	""	"566.2"	""	"605.6"	""	"686.0"	""	"717.7"	"748.2"	""	"248"	"25"	"30.000"	"23.000"	"0.039484049269404"	""	"0.0006037"	"0.005533"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITGANAK"	"[K].iTGANAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"566.85767"	"1132.70806"	"1132.70903"	"-0.86"	"-0.00049"	"6/52"	"6"	"52"	"5675586.34851074"	"HCD"	"MS2"	"8.496653"	"423.3"	"100.000"	"27.6981"	"5792"	"5792"	"5772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"653.1"	""	"573.7"	""	"625.6"	""	"703.2"	"3.8"	"728.4"	"717.8"	""	"248"	"24"	"30.000"	"23.000"	"0.0472521621008279"	""	"0.0006737"	"0.006615"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAAVGFHR"	"[K].fAAVGFHR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8; Q5M875"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1; 17-beta-hydroxysteroid dehydrogenase 13 OS=Rattus norvegicus OX=10116 GN=Hsd17b13 PE=1 SV=1"	"0"	"3"	"3"	"0.4074"	"0.0000"	"1"	"1"	"1"	"378.55139"	"1133.63962"	"1133.64173"	"-1.86"	"-0.00070"	"9/58"	"9"	"58"	"8103437.66070557"	"HCD"	"MS2"	"46.35789"	"165.4"	"100.000"	"33.4790"	"8107"	"8107"	"8092"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.8"	""	"249.6"	""	"246.2"	""	"276.5"	"4.8"	"287.3"	"280.2"	""	"837"	"27"	"36.000"	"29.000"	"0.0759793304870557"	""	"0.0002723"	"0.001377"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAAVGFHR"	"[K].fAAVGFHR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8; Q5M875"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1; 17-beta-hydroxysteroid dehydrogenase 13 OS=Rattus norvegicus OX=10116 GN=Hsd17b13 PE=1 SV=1"	"0"	"3"	"3"	"0.3846"	"0.0000"	"1"	"1"	"1"	"378.55142"	"1133.63971"	"1133.64173"	"-1.78"	"-0.00067"	"9/58"	"9"	"58"	"8693494.42376709"	"HCD"	"MS2"	"0"	"185.0"	"100.000"	"33.5527"	"8180"	"8180"	"8166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"238.3"	""	"277.5"	""	"286.5"	""	"325.7"	"2.4"	"308.7"	"311.7"	""	"837"	"26"	"36.000"	"29.000"	"0.0969829661011807"	""	"0.0001889"	"0.0007867"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGHFFR"	"[K].qLGHFFR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ERA7"	"Mesothelin OS=Rattus norvegicus OX=10116 GN=Msln PE=2 SV=2"	"Q9ERA7"	"Mesothelin OS=Rattus norvegicus OX=10116 GN=Msln PE=2 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"378.55197"	"1133.64136"	"1133.64173"	"-0.32"	"-0.00012"	"5/62"	"5"	"62"	"1319659.75836182"	"HCD"	"MS2"	"47.37766"	"67.7"	"100.000"	"33.8778"	"8313"	"8313"	"8282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.3"	""	"97.1"	""	"100.3"	""	"112.1"	""	"124.9"	"122.2"	""	"816"	"6"	"36.000"	"29.000"	"10.2721218652561"	"16"	"0.001966"	"0.02884"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIDFGLAR"	"[K].iIDFGLAR.[TRHQ]"	"N-Term(TMT6plex)"	"1"	"2"	""	""	"P20689; E9PT87"	"Myosin light chain kinase 2, skeletal/cardiac muscle OS=Rattus norvegicus OX=10116 GN=Mylk2 PE=1 SV=2; Myosin light chain kinase 3 OS=Rattus norvegicus OX=10116 GN=Mylk3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"567.34705"	"1133.68682"	"1133.68801"	"-1.05"	"-0.00060"	"10/56"	"10"	"56"	"28181348.1497803"	"HCD"	"MS2"	"5.08144"	"497.4"	"42.188"	"58.0254"	"18151"	"18151"	"18133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"737.7"	""	"754.8"	""	"739.7"	""	"716.2"	""	"859.8"	"910.2"	""	"371"	"39"	"32.000"	"25.000"	"0.00236779399034504"	""	"0.0004166"	"0.002321"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDFGLAR"	"[K].iLDFGLAR.[TRHQ]"	"N-Term(TMT6plex)"	"1"	"6"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"P49185; P49186; Q9WTY9; P70618; P49187; Q63538"	"Mitogen-activated protein kinase 8 OS=Rattus norvegicus OX=10116 GN=Mapk8 PE=1 SV=1; Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1; Mitogen-activated protein kinase 13 OS=Rattus norvegicus OX=10116 GN=Mapk13 PE=1 SV=1; Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3; Mitogen-activated protein kinase 10 OS=Rattus norvegicus OX=10116 GN=Mapk10 PE=1 SV=3; Mitogen-activated protein kinase 12 OS=Rattus norvegicus OX=10116 GN=Mapk12 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"567.34705"	"1133.68682"	"1133.68801"	"-1.05"	"-0.00060"	"10/56"	"10"	"56"	"28181348.1497803"	"HCD"	"MS2"	"5.08144"	"497.4"	"42.188"	"58.0254"	"18151"	"18151"	"18133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"737.7"	""	"754.8"	""	"739.7"	""	"716.2"	""	"859.8"	"910.2"	""	"371"	"39"	"32.000"	"25.000"	"0.00236779399034504"	""	"0.0004166"	"0.002321"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIDFGLAR"	"[K].iIDFGLAR.[TRHQ]"	"N-Term(TMT6plex)"	"1"	"2"	""	""	"P20689; E9PT87"	"Myosin light chain kinase 2, skeletal/cardiac muscle OS=Rattus norvegicus OX=10116 GN=Mylk2 PE=1 SV=2; Myosin light chain kinase 3 OS=Rattus norvegicus OX=10116 GN=Mylk3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"567.34705"	"1133.68682"	"1133.68801"	"-1.05"	"-0.00060"	"6/56"	"6"	"56"	"11531243.0827026"	"HCD"	"MS2"	"19.73673"	"500.5"	"100.000"	"59.3645"	"18694"	"18694"	"18677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"690.8"	""	"697.7"	""	"704.9"	""	"880.8"	""	"839.7"	"926.5"	""	"371"	"26"	"32.000"	"25.000"	"0.0438878103883608"	"18"	"0.0004166"	"0.002501"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDFGLAR"	"[K].iLDFGLAR.[TRHQ]"	"N-Term(TMT6plex)"	"1"	"6"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"P49185; P49186; Q9WTY9; P70618; P49187; Q63538"	"Mitogen-activated protein kinase 8 OS=Rattus norvegicus OX=10116 GN=Mapk8 PE=1 SV=1; Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1; Mitogen-activated protein kinase 13 OS=Rattus norvegicus OX=10116 GN=Mapk13 PE=1 SV=1; Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3; Mitogen-activated protein kinase 10 OS=Rattus norvegicus OX=10116 GN=Mapk10 PE=1 SV=3; Mitogen-activated protein kinase 12 OS=Rattus norvegicus OX=10116 GN=Mapk12 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"567.34705"	"1133.68682"	"1133.68801"	"-1.05"	"-0.00060"	"6/56"	"6"	"56"	"11531243.0827026"	"HCD"	"MS2"	"19.73673"	"500.5"	"100.000"	"59.3645"	"18694"	"18694"	"18677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"690.8"	""	"697.7"	""	"704.9"	""	"880.8"	""	"839.7"	"926.5"	""	"371"	"26"	"32.000"	"25.000"	"0.0438878103883608"	"18"	"0.0004166"	"0.002501"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIDFGLAR"	"[K].iIDFGLAR.[TRHQ]"	"N-Term(TMT6plex)"	"1"	"2"	""	""	"P20689; E9PT87"	"Myosin light chain kinase 2, skeletal/cardiac muscle OS=Rattus norvegicus OX=10116 GN=Mylk2 PE=1 SV=2; Myosin light chain kinase 3 OS=Rattus norvegicus OX=10116 GN=Mylk3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"567.34747"	"1133.68767"	"1133.68801"	"-0.30"	"-0.00017"	"10/56"	"10"	"56"	"28326529.0969238"	"HCD"	"MS2"	"1.724035"	"445.1"	"39.505"	"57.8933"	"18044"	"18044"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"679.0"	""	"654.5"	""	"668.3"	""	"653.9"	""	"742.9"	"817.6"	""	"372"	"41"	"32.000"	"25.000"	"0.00150838756760815"	""	"0.0003839"	"0.002035"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDFGLAR"	"[K].iLDFGLAR.[TRHQ]"	"N-Term(TMT6plex)"	"1"	"6"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"P49185; P49186; Q9WTY9; P70618; P49187; Q63538"	"Mitogen-activated protein kinase 8 OS=Rattus norvegicus OX=10116 GN=Mapk8 PE=1 SV=1; Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1; Mitogen-activated protein kinase 13 OS=Rattus norvegicus OX=10116 GN=Mapk13 PE=1 SV=1; Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3; Mitogen-activated protein kinase 10 OS=Rattus norvegicus OX=10116 GN=Mapk10 PE=1 SV=3; Mitogen-activated protein kinase 12 OS=Rattus norvegicus OX=10116 GN=Mapk12 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"567.34747"	"1133.68767"	"1133.68801"	"-0.30"	"-0.00017"	"10/56"	"10"	"56"	"28326529.0969238"	"HCD"	"MS2"	"1.724035"	"445.1"	"39.505"	"57.8933"	"18044"	"18044"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"679.0"	""	"654.5"	""	"668.3"	""	"653.9"	""	"742.9"	"817.6"	""	"372"	"41"	"32.000"	"25.000"	"0.00150838756760815"	""	"0.0003839"	"0.002035"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIDFGLAR"	"[K].iIDFGLAR.[TRHQ]"	"N-Term(TMT6plex)"	"1"	"2"	""	""	"P20689; E9PT87"	"Myosin light chain kinase 2, skeletal/cardiac muscle OS=Rattus norvegicus OX=10116 GN=Mylk2 PE=1 SV=2; Myosin light chain kinase 3 OS=Rattus norvegicus OX=10116 GN=Mylk3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"567.34760"	"1133.68791"	"1133.68801"	"-0.09"	"-0.00005"	"6/56"	"6"	"56"	"10838760.8035889"	"HCD"	"MS2"	"22.4157"	"439.3"	"96.734"	"59.2751"	"18603"	"18603"	"18585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"594.8"	""	"564.3"	""	"637.5"	""	"765.9"	""	"770.9"	"834.5"	""	"389"	"26"	"32.000"	"25.000"	"0.0458057085717774"	"18"	"0.0004166"	"0.002199"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDFGLAR"	"[K].iLDFGLAR.[TRHQ]"	"N-Term(TMT6plex)"	"1"	"6"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"P49185; P49186; Q9WTY9; P70618; P49187; Q63538"	"Mitogen-activated protein kinase 8 OS=Rattus norvegicus OX=10116 GN=Mapk8 PE=1 SV=1; Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1; Mitogen-activated protein kinase 13 OS=Rattus norvegicus OX=10116 GN=Mapk13 PE=1 SV=1; Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3; Mitogen-activated protein kinase 10 OS=Rattus norvegicus OX=10116 GN=Mapk10 PE=1 SV=3; Mitogen-activated protein kinase 12 OS=Rattus norvegicus OX=10116 GN=Mapk12 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"567.34760"	"1133.68791"	"1133.68801"	"-0.09"	"-0.00005"	"6/56"	"6"	"56"	"10838760.8035889"	"HCD"	"MS2"	"22.4157"	"439.3"	"96.734"	"59.2751"	"18603"	"18603"	"18585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"594.8"	""	"564.3"	""	"637.5"	""	"765.9"	""	"770.9"	"834.5"	""	"389"	"26"	"32.000"	"25.000"	"0.0458057085717774"	"18"	"0.0004166"	"0.002199"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSSPGK"	"[R].lSSSPGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2X5"	"Activated CDC42 kinase 1 OS=Rattus norvegicus OX=10116 GN=Tnk2 PE=2 SV=1"	"Q5U2X5"	"Activated CDC42 kinase 1 OS=Rattus norvegicus OX=10116 GN=Tnk2 PE=2 SV=1"	"0"	"2"	"2"	"0.1176"	"0.0000"	"1"	"1"	"1"	"567.34979"	"1133.69231"	"1133.69304"	"-0.65"	"-0.00037"	"10/52"	"10"	"52"	"2858878.25268555"	"HCD"	"MS2"	"0"	"241.6"	"100.000"	"28.4262"	"6125"	"6125"	"6102"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.2"	""	"228.9"	""	"236.4"	""	"524.8"	""	"524.3"	"521.6"	""	"355"	"17"	"32.000"	"25.000"	"0.379488270886646"	""	"0.004346"	"0.1226"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFGIWLR"	"[K].nFGIWLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"567.83441"	"1134.66155"	"1134.66213"	"-0.51"	"-0.00029"	"5/62"	"5"	"62"	"8093323.22247314"	"HCD"	"MS2"	"14.02855"	"356.7"	"97.487"	"56.0179"	"17277"	"17277"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"446.5"	""	"483.0"	""	"522.8"	""	"593.8"	""	"657.9"	"680.8"	""	"587"	"30"	"34.000"	"27.000"	"0.032107619350086"	"19"	"0.00103"	"0.01161"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFGIWLR"	"[K].nFGIWLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"567.83472"	"1134.66216"	"1134.66213"	"0.02"	"0.00001"	"5/62"	"5"	"62"	"7937005.93841553"	"HCD"	"MS2"	"12.72007"	"352.3"	"100.000"	"56.2237"	"17415"	"17415"	"17397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"449.4"	""	"481.0"	""	"510.7"	""	"590.9"	""	"648.8"	"659.7"	""	"503"	"14"	"34.000"	"27.000"	"0.917356176517903"	"19"	"0.001686"	"0.02278"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAAFAVSR"	"[R].lAAAFAVSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.84497"	"1134.68266"	"1134.68326"	"-0.52"	"-0.00030"	"7/64"	"7"	"64"	"6014788.40820313"	"HCD"	"MS2"	"23.35798"	"318.5"	"100.000"	"42.3802"	"11746"	"11746"	"11724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"449.2"	""	"474.5"	""	"460.6"	""	"517.5"	""	"549.4"	"565.5"	""	"374"	"41"	"32.000"	"25.000"	"0.0013735409334538"	"15"	"0.0001889"	"0.0004132"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAAFAVSR"	"[R].lAAAFAVSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"567.84540"	"1134.68352"	"1134.68326"	"0.23"	"0.00013"	"7/64"	"7"	"64"	"7911944.75372314"	"HCD"	"MS2"	"24.32559"	"348.5"	"100.000"	"42.5976"	"11879"	"11879"	"11859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"497.7"	""	"567.5"	""	"521.8"	""	"515.1"	""	"596.3"	"600.7"	""	"378"	"45"	"32.000"	"25.000"	"0.000631628625649356"	"18"	"0.0001889"	"0.000496"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"568.31055"	"1135.61382"	"1135.63089"	"-15.03"	"-0.00854"	"5/62"	"5"	"62"	"4971685.0524292"	"HCD"	"MS2"	"0"	"305.1"	"100.000"	"43.4452"	"12222"	"12222"	"12202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"383.1"	""	"361.0"	""	"423.6"	""	"599.4"	"4.4"	"531.8"	"587.4"	""	"789"	"24"	"35.000"	"28.000"	"0.161081997908247"	"18"	"0.003197"	"0.06707"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"568.31763"	"1135.62798"	"1135.63089"	"-2.56"	"-0.00146"	"10/62"	"10"	"62"	"7312862.85809326"	"HCD"	"MS2"	"0"	"398.9"	"100.000"	"43.4955"	"12242"	"12242"	"12223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"543.8"	""	"489.1"	""	"554.9"	""	"683.8"	"4.1"	"724.4"	"780.2"	""	"743"	"31"	"35.000"	"28.000"	"0.031257829512119"	"23"	"0.0008731"	"0.008773"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"568.31812"	"1135.62895"	"1135.63089"	"-1.70"	"-0.00097"	"10/62"	"10"	"62"	"6644794.66351318"	"HCD"	"MS2"	"0"	"384.2"	"100.000"	"43.2544"	"12095"	"12095"	"12076"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"512.6"	""	"448.6"	""	"517.2"	""	"703.2"	"6.0"	"680.1"	"773.5"	""	"731"	"32"	"35.000"	"28.000"	"0.0218216397246392"	"20"	"0.0006037"	"0.00511"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"568.32104"	"1135.63481"	"1135.63592"	"-0.98"	"-0.00056"	"6/52"	"6"	"52"	"1774795.76904297"	"HCD"	"MS2"	"3.303338"	"149.1"	"100.000"	"22.1735"	"3579"	"3579"	"3555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.8"	""	"187.5"	""	"191.2"	""	"246.1"	""	"287.5"	"304.2"	""	"754"	"26"	"35.000"	"28.000"	"0.0885811573459812"	"19"	"0.000523"	"0.00321"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"3"	"568.32135"	"1135.63542"	"1135.63592"	"-0.44"	"-0.00025"	"6/52"	"6"	"52"	"1040048.27105713"	"HCD"	"MS2"	"4.04768"	"90.7"	"100.000"	"22.2003"	"3624"	"3624"	"3607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.7"	""	"83.8"	""	"120.9"	""	"154.4"	"0.0"	"199.2"	"181.5"	""	"754"	"21"	"35.000"	"28.000"	"0.323848097607534"	"24"	"0.0003839"	"0.001988"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAAMGK"	"[K].vTAAMGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"568.34894"	"1135.69060"	"1135.69094"	"-0.30"	"-0.00017"	"6/48"	"6"	"48"	"4577872.29882813"	"HCD"	"MS2"	"32.08893"	"403.6"	"100.000"	"32.5852"	"7790"	"7790"	"7766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"616.4"	""	"556.9"	""	"602.3"	""	"501.7"	"0.6"	"786.1"	"761.1"	""	"288"	"36"	"31.000"	"24.000"	"0.00355928276882323"	""	"0.000523"	"0.002979"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAAMGK"	"[K].vTAAMGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"568.34900"	"1135.69072"	"1135.69094"	"-0.19"	"-0.00011"	"6/48"	"6"	"48"	"4260131.59338379"	"HCD"	"MS2"	"29.15602"	"392.6"	"100.000"	"32.4969"	"7711"	"7711"	"7688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"588.2"	""	"574.7"	""	"579.5"	""	"452.1"	"4.3"	"775.0"	"747.4"	""	"288"	"28"	"31.000"	"24.000"	"0.0238980514671009"	""	"0.0006037"	"0.005615"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLTYIR"	"[K].qLLTYIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"568.35522"	"1135.70317"	"1135.70366"	"-0.43"	"-0.00024"	"5/60"	"5"	"60"	"4014658.82336426"	"HCD"	"MS2"	"34.35058"	"228.2"	"100.000"	"44.6947"	"12731"	"12731"	"12705"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"321.1"	""	"326.6"	""	"311.2"	""	"388.5"	"2.9"	"408.6"	"402.4"	""	"193"	"29"	"29.000"	"22.000"	"0.0126336055569443"	""	"0.001007"	"0.01085"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPLFDR"	"[K].fLPLFDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"568.83612"	"1136.66496"	"1136.66655"	"-1.39"	"-0.00079"	"6/48"	"6"	"48"	"7333501.1786499"	"HCD"	"MS2"	"18.06626"	"311.1"	"100.000"	"65.4373"	"21173"	"21173"	"21155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"369.5"	""	"370.4"	""	"410.4"	""	"525.3"	""	"626.8"	"657.7"	""	"466"	"14"	"33.000"	"26.000"	"0.847922034176392"	"23"	"0.00103"	"0.01279"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSASGTK"	"[K].qSASGTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"568.83618"	"1136.66509"	"1136.66756"	"-2.17"	"-0.00124"	"7/68"	"7"	"68"	"275389.34552002"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"20.6281"	"3001"	"3001"	"2993"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.8"	""	"23.6"	""	"31.6"	""	"31.6"	""	"40.8"	"41.8"	""	"465"	"14"	"33.000"	"26.000"	"1.00328185362455"	"16"	"0.004007"	"0.1024"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPLFDR"	"[K].fLPLFDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"568.83624"	"1136.66521"	"1136.66655"	"-1.18"	"-0.00067"	"5/48"	"5"	"48"	"6329665.38214111"	"HCD"	"MS2"	"14.50303"	"277.5"	"100.000"	"65.1310"	"21048"	"21048"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.2"	""	"338.8"	""	"386.7"	""	"528.2"	""	"490.5"	"546.8"	""	"465"	"28"	"33.000"	"26.000"	"0.0373613841325494"	"21"	"0.0009404"	"0.01028"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSASGTK"	"[K].qSASGTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"568.83655"	"1136.66582"	"1136.66756"	"-1.53"	"-0.00087"	"5/68"	"5"	"68"	"396274.455993652"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"20.6436"	"2974"	"2974"	"2964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.8"	""	"29.0"	""	"37.5"	""	"46.8"	"0.7"	"46.8"	"49.3"	""	"465"	"18"	"33.000"	"26.000"	"0.39941370001414"	"16"	"0.0008731"	"0.009236"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPLFDR"	"[K].fLPLFDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"568.83655"	"1136.66582"	"1136.66655"	"-0.64"	"-0.00036"	"5/48"	"5"	"48"	"3919536.81665039"	"HCD"	"MS2"	"24.84621"	"193.1"	"100.000"	"65.0929"	"20980"	"20980"	"20953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.0"	""	"219.0"	""	"272.1"	""	"365.6"	"0.8"	"357.0"	"386.1"	""	"465"	"28"	"33.000"	"26.000"	"0.0401257309887723"	""	"0.0006037"	"0.004401"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPLFDR"	"[K].fLPLFDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"568.83661"	"1136.66594"	"1136.66655"	"-0.53"	"-0.00030"	"5/48"	"5"	"48"	"8689309.53564453"	"HCD"	"MS2"	"2.620132"	"330.8"	"86.772"	"65.3855"	"21099"	"21099"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"393.8"	""	"394.7"	""	"465.7"	""	"598.3"	""	"619.2"	"670.9"	""	"465"	"26"	"33.000"	"26.000"	"0.0624342583615603"	"21"	"0.00175"	"0.02414"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNLYPR"	"[K].vFNLYPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"569.33356"	"1137.65984"	"1137.66180"	"-1.72"	"-0.00098"	"5/58"	"5"	"58"	"15281070.8821411"	"HCD"	"MS2"	"35.54955"	"593.5"	"82.339"	"46.3187"	"13341"	"13341"	"13320"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"883.1"	""	"950.3"	""	"835.1"	""	"942.2"	""	"1016.4"	"989.3"	""	"467"	"27"	"33.000"	"26.000"	"0.0423922907257527"	"16"	"0.00274"	"0.04369"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNLYPR"	"[K].vFNLYPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"569.33380"	"1137.66033"	"1137.66180"	"-1.29"	"-0.00073"	"5/58"	"5"	"58"	"22449268.835022"	"HCD"	"MS2"	"20.71305"	"1036.7"	"100.000"	"46.6173"	"13511"	"13511"	"13490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1622.5"	""	"1570.0"	""	"1479.9"	""	"1646.1"	""	"1727.9"	"1765.2"	""	"491"	"30"	"33.000"	"26.000"	"0.023607581434319"	"16"	"0.00162"	"0.02253"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNLYPR"	"[K].vFNLYPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.33429"	"1137.66130"	"1137.66180"	"-0.43"	"-0.00025"	"5/58"	"5"	"58"	"129681846.379395"	"HCD"	"MS2"	"4.392105"	"453.1"	"8.348"	"46.6197"	"13465"	"13465"	"13448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"620.0"	""	"650.4"	""	"674.3"	""	"740.7"	""	"771.4"	"834.4"	""	"491"	"31"	"33.000"	"26.000"	"0.0196811964561675"	"14"	"0.006061"	"0.2124"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNLYPR"	"[K].vFNLYPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"569.33429"	"1137.66130"	"1137.66180"	"-0.43"	"-0.00025"	"5/58"	"5"	"58"	"5546391.48986816"	"HCD"	"MS2"	"12.04264"	"273.1"	"100.000"	"47.2311"	"13763"	"13763"	"13746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"386.2"	""	"391.8"	""	"403.0"	""	"424.2"	""	"485.2"	"500.1"	""	"491"	"30"	"33.000"	"26.000"	"0.0228061247954474"	"19"	"0.0008125"	"0.007498"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNLYPR"	"[K].vFNLYPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.33441"	"1137.66155"	"1137.66180"	"-0.22"	"-0.00012"	"5/58"	"5"	"58"	"6425590.30834961"	"HCD"	"MS2"	"9.242832"	"305.6"	"100.000"	"46.9371"	"13594"	"13594"	"13576"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"451.4"	""	"419.5"	""	"428.2"	""	"490.5"	""	"520.4"	"586.5"	""	"483"	"30"	"33.000"	"26.000"	"0.0217228665939503"	"14"	"0.0007076"	"0.007143"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNLYPR"	"[K].vFNLYPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"569.33447"	"1137.66167"	"1137.66180"	"-0.11"	"-0.00006"	"5/58"	"5"	"58"	"112714156.234863"	"HCD"	"MS2"	"3.196613"	"391.4"	"8.574"	"46.9182"	"13635"	"13635"	"13618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"533.3"	""	"572.7"	""	"583.6"	""	"616.7"	""	"662.0"	"739.8"	""	"483"	"31"	"33.000"	"26.000"	"0.0193159972584197"	"18"	"0.005323"	"0.1634"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAMAAAK"	"[K].tAmAAAk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"569.33807"	"1137.66887"	"1137.67020"	"-1.17"	"-0.00067"	"6/48"	"6"	"48"	"350286.48638916"	"HCD"	"MS2"	"47.53048"	"28.4"	"100.000"	"23.1196"	"3977"	"3977"	"3963"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.5"	""	"46.5"	""	"33.5"	""	"59.8"	""	"49.2"	"42.0"	""	"486"	"18"	"33.000"	"26.000"	"0.347221231918198"	"18"	"0.003286"	"0.07416"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAMAAAK"	"[K].tAmAAAk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.33820"	"1137.66911"	"1137.67020"	"-0.95"	"-0.00054"	"5/48"	"5"	"48"	"317136.165222168"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"23.1025"	"3936"	"3936"	"3921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.7"	""	"39.4"	""	"32.0"	""	"60.6"	""	"47.7"	"46.5"	""	"486"	"8"	"33.000"	"26.000"	"4.08889796840124"	"13"	"0.004103"	"0.1063"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFAANSR"	"[K].fPFAANSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"569.81378"	"1138.62029"	"1138.62066"	"-0.33"	"-0.00019"	"7/60"	"7"	"60"	"9166649.9954834"	"HCD"	"MS2"	"26.90815"	"437.5"	"82.247"	"40.5223"	"10988"	"10988"	"10965"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"700.2"	""	"634.6"	""	"663.3"	""	"667.5"	"5.7"	"716.5"	"750.1"	""	"518"	"25"	"34.000"	"27.000"	"0.0834256816942409"	"25"	"0.0007076"	"0.006903"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFAANSR"	"[K].fPFAANSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"569.81396"	"1138.62065"	"1138.62066"	"-0.01"	"0.00000"	"7/60"	"7"	"60"	"8828782.05725098"	"HCD"	"MS2"	"30.25334"	"502.6"	"100.000"	"40.6669"	"11091"	"11091"	"11069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"792.7"	""	"752.2"	""	"776.2"	""	"740.7"	"7.6"	"846.8"	"837.6"	""	"506"	"25"	"34.000"	"27.000"	"0.0783647082701795"	"18"	"0.0006037"	"0.004168"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFPASADR"	"[K].fFPASADR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"570.30536"	"1139.60344"	"1139.60467"	"-1.08"	"-0.00062"	"5/60"	"5"	"60"	"11208919.4072876"	"HCD"	"MS2"	"32.32011"	"675.6"	"100.000"	"38.3709"	"10152"	"10152"	"10129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"895.1"	""	"935.0"	""	"931.0"	""	"1019.4"	""	"1310.7"	"1318.5"	""	"548"	"4"	"34.000"	"27.000"	"10.7337274327533"	"15"	"0.004291"	"0.1131"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVAAHK"	"[R].vGVAAHk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"570.36798"	"1139.72869"	"1139.73010"	"-1.24"	"-0.00071"	"6/50"	"6"	"50"	"4448698.66949463"	"HCD"	"MS2"	"0"	"255.0"	"100.000"	"25.0607"	"4759"	"4759"	"4732"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"245.7"	""	"231.1"	""	"202.9"	""	"690.0"	""	"473.6"	"581.4"	""	"104"	"27"	"27.000"	"20.000"	"0.0115878627762056"	""	"0.0006037"	"0.005668"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVAAHK"	"[R].vGVAAHk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"3"	"3"	"0.5312"	"0.0000"	"1"	"1"	"1"	"380.58109"	"1139.72870"	"1139.73010"	"-1.23"	"-0.00047"	"9/50"	"9"	"50"	"22004565.2879028"	"HCD"	"MS2"	"30.06189"	"1119.1"	"100.000"	"24.9883"	"4694"	"4694"	"4672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1090.0"	""	"1126.0"	""	"962.2"	""	"3074.9"	""	"2024.6"	"2353.7"	""	"104"	"32"	"27.000"	"20.000"	"0.00295123194812444"	""	"0.0009404"	"0.009876"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVAAHK"	"[R].vGVAAHk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"570.36829"	"1139.72930"	"1139.73010"	"-0.70"	"-0.00040"	"6/50"	"6"	"50"	"4045123.56799316"	"HCD"	"MS2"	"0"	"240.5"	"100.000"	"25.0020"	"4700"	"4700"	"4672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"239.5"	""	"234.8"	""	"170.9"	""	"673.9"	""	"440.2"	"528.1"	""	"104"	"27"	"27.000"	"20.000"	"0.0116145755587188"	""	"0.0009404"	"0.009789"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVAAHK"	"[R].vGVAAHk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"3"	"3"	"0.2414"	"0.0000"	"1"	"1"	"1"	"380.58142"	"1139.72971"	"1139.73010"	"-0.34"	"-0.00013"	"9/50"	"9"	"50"	"14467095.2328491"	"HCD"	"MS2"	"55.2086"	"731.0"	"100.000"	"25.0194"	"4742"	"4742"	"4716"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"768.0"	""	"750.8"	""	"683.6"	""	"1925.1"	"2.2"	"1328.3"	"1480.6"	""	"104"	"29"	"27.000"	"20.000"	"0.0064863942740633"	""	"0.0008453"	"0.008006"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPGLGPK"	"[R].iPGLGPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35547"	"Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus OX=10116 GN=Acsl4 PE=1 SV=1"	"O35547"	"Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus OX=10116 GN=Acsl4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.38049"	"1139.75371"	"1139.75525"	"-1.35"	"-0.00077"	"6/50"	"6"	"50"	"4639040.50567627"	"HCD"	"MS2"	"0"	"269.2"	"100.000"	"42.2236"	"11727"	"11727"	"11712"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"354.5"	"3.9"	"347.6"	""	"393.8"	""	"412.9"	""	"503.1"	"538.1"	""	"68"	"21"	"25.000"	"18.000"	"0.0248015553486553"	"14"	"0.003698"	"0.08536"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPGLGPK"	"[R].iPGLGPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35547"	"Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus OX=10116 GN=Acsl4 PE=1 SV=1"	"O35547"	"Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus OX=10116 GN=Acsl4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.38080"	"1139.75432"	"1139.75525"	"-0.82"	"-0.00047"	"6/50"	"6"	"50"	"4588847.29150391"	"HCD"	"MS2"	"18.41614"	"273.8"	"100.000"	"42.0217"	"11600"	"11600"	"11586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.2"	""	"344.5"	""	"397.4"	""	"443.1"	"0.6"	"523.2"	"536.1"	""	"68"	"20"	"25.000"	"18.000"	"0.0310798502099885"	"14"	"0.006001"	"0.2081"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FWANFAR"	"[K].fWANFAR.[N]"	"N-Term(TMT6plex)"	"2"	"4"	"P10959; Q63108"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3;Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63010; Q64573; P10959; Q63108"	"Liver carboxylesterase B-1 OS=Rattus norvegicus OX=10116 PE=1 SV=1; Liver carboxylesterase 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3; Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"570.81091"	"1140.61455"	"1140.61518"	"-0.55"	"-0.00032"	"5/56"	"5"	"56"	"21090915.0581055"	"HCD"	"MS2"	"38.63156"	"1147.8"	"100.000"	"53.1089"	"16159"	"16159"	"16134"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1812.2"	""	"2008.5"	""	"1704.9"	""	"1260.4"	"7.9"	"2113.2"	"1956.3"	""	"473"	"26"	"33.000"	"26.000"	"0.0613523419141099"	"18"	"0.00119"	"0.01565"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FWANFAR"	"[K].fWANFAR.[N]"	"N-Term(TMT6plex)"	"2"	"4"	"P10959; Q63108"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3;Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63010; Q64573; P10959; Q63108"	"Liver carboxylesterase B-1 OS=Rattus norvegicus OX=10116 PE=1 SV=1; Liver carboxylesterase 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3; Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"570.81116"	"1140.61504"	"1140.61518"	"-0.12"	"-0.00007"	"5/56"	"5"	"56"	"21637406.6013794"	"HCD"	"MS2"	"8.468689"	"1187.6"	"100.000"	"52.9359"	"16038"	"16038"	"16018"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1870.8"	""	"2059.6"	""	"1753.0"	""	"1331.9"	"6.9"	"2169.6"	"2048.9"	""	"454"	"26"	"33.000"	"26.000"	"0.0580798996327581"	"19"	"0.001912"	"0.02732"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEFFAR"	"[K].lEEFFAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"570.81531"	"1140.62334"	"1140.62508"	"-1.52"	"-0.00087"	"5/50"	"5"	"50"	"6715557.6307373"	"HCD"	"MS2"	"0"	"385.4"	"100.000"	"53.4684"	"16300"	"16300"	"16288"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"536.8"	""	"528.5"	""	"557.1"	""	"599.5"	"10.8"	"700.5"	"718.6"	""	"455"	"26"	"33.000"	"26.000"	"0.0535773712086342"	"15"	"0.001217"	"0.01748"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEFFAR"	"[K].lEEFFAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"570.81531"	"1140.62334"	"1140.62508"	"-1.52"	"-0.00087"	"5/50"	"5"	"50"	"6591566.24749756"	"HCD"	"MS2"	"14.32348"	"403.2"	"100.000"	"53.2347"	"16154"	"16154"	"16143"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"549.9"	""	"524.0"	""	"603.8"	""	"643.5"	"17.1"	"743.1"	"739.2"	""	"455"	"19"	"33.000"	"26.000"	"0.306183230547728"	"15"	"0.00103"	"0.01167"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APAQAPK"	"[K].aPAQAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.85999"	"1140.71269"	"1140.71411"	"-1.25"	"-0.00071"	"5/56"	"5"	"56"	"1745435.12145996"	"HCD"	"MS2"	"0"	"136.8"	"100.000"	"25.4871"	"4933"	"4933"	"4909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.5"	""	"163.6"	""	"180.2"	""	"216.9"	""	"271.7"	"258.0"	""	"191"	"11"	"29.000"	"22.000"	"0.703077778107473"	"13"	"0.001058"	"0.01407"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.32336"	"1141.63945"	"1141.64145"	"-1.75"	"-0.00100"	"6/62"	"6"	"62"	"816010.136413574"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"23.8825"	"4243"	"4243"	"4227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.9"	""	"37.8"	""	"55.6"	""	"74.7"	""	"72.5"	"118.9"	""	"405"	"44"	"33.000"	"26.000"	"0.000773437148451094"	"15"	"0.001217"	"0.01734"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.32416"	"1141.64104"	"1141.64145"	"-0.36"	"-0.00021"	"6/62"	"6"	"62"	"816170.722290039"	"HCD"	"MS2"	"0"	"43.3"	"100.000"	"23.9111"	"4289"	"4289"	"4261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.0"	""	"44.2"	""	"57.7"	""	"70.1"	""	"72.3"	"117.1"	""	"403"	"40"	"33.000"	"26.000"	"0.00226086718541846"	"15"	"0.0008731"	"0.009007"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGIGHK"	"[R].nGGIGHk.[C]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"381.22867"	"1141.67145"	"1141.67298"	"-1.34"	"-0.00051"	"4/62"	"4"	"62"	"1445531.75994873"	"HCD"	"MS2"	"67.14278"	"143.4"	"100.000"	"23.1415"	"3951"	"3951"	"3938"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.1"	""	"177.0"	""	"204.4"	""	"226.3"	""	"276.2"	"281.1"	""	"352"	"14"	"32.000"	"25.000"	"0.639017376395378"	""	"0.001454"	"0.01997"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVTDPR"	"[R].lLVVTDPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"571.35919"	"1141.71111"	"1141.71423"	"-2.73"	"-0.00156"	"5/58"	"5"	"58"	"7041745.22106934"	"HCD"	"MS2"	"0"	"232.6"	"100.000"	"42.3107"	"11762"	"11762"	"11742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"326.2"	""	"324.4"	""	"336.7"	""	"358.0"	""	"424.1"	"438.4"	""	"195"	"38"	"29.000"	"22.000"	"0.00168269194469045"	""	"0.005478"	"0.1746"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVTDPR"	"[R].lLVVTDPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"571.35931"	"1141.71135"	"1141.71423"	"-2.52"	"-0.00144"	"5/58"	"5"	"58"	"7196637.35314941"	"HCD"	"MS2"	"43.33925"	"249.0"	"100.000"	"42.1133"	"11637"	"11637"	"11615"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"337.4"	""	"323.0"	""	"384.1"	""	"408.8"	""	"452.4"	"454.5"	""	"195"	"35"	"29.000"	"22.000"	"0.00306905460624878"	""	"0.006627"	"0.2421"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIVNLIR"	"[R].wIVNLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"571.86554"	"1142.72380"	"1142.72473"	"-0.81"	"-0.00046"	"5/56"	"5"	"56"	"2727524.72460938"	"HCD"	"MS2"	"34.5133"	"132.1"	"100.000"	"65.3905"	"21101"	"21101"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.1"	""	"172.0"	""	"182.3"	""	"234.9"	""	"234.7"	"268.9"	""	"246"	"18"	"30.000"	"23.000"	"0.189629155712796"	"17"	"0.0008125"	"0.007776"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIVNLIR"	"[R].wIVNLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"571.86591"	"1142.72453"	"1142.72473"	"-0.17"	"-0.00010"	"5/56"	"5"	"56"	"3120735.59173584"	"HCD"	"MS2"	"42.90558"	"152.4"	"100.000"	"65.3614"	"21142"	"21142"	"21123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.7"	""	"196.4"	""	"190.4"	""	"271.5"	""	"289.6"	"307.6"	""	"246"	"18"	"30.000"	"23.000"	"0.19994249695731"	"18"	"0.0006737"	"0.006557"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"572.34930"	"1143.69133"	"1143.69349"	"-1.89"	"-0.00108"	"6/58"	"6"	"58"	"2763836.18481445"	"HCD"	"MS2"	"33.95007"	"172.1"	"100.000"	"45.9135"	"13225"	"13225"	"13203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"253.1"	""	"235.6"	""	"228.3"	""	"278.8"	""	"311.6"	"324.8"	""	"461"	"36"	"33.000"	"26.000"	"0.00528044993962972"	""	"0.0001889"	"0.0006211"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.2821"	"0.0000"	"1"	"1"	"1"	"572.35059"	"1143.69390"	"1143.69349"	"0.35"	"0.00020"	"6/58"	"6"	"58"	"2794980.09771729"	"HCD"	"MS2"	"0"	"165.0"	"100.000"	"45.7226"	"13097"	"13097"	"13079"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"241.1"	""	"219.9"	""	"229.0"	""	"289.8"	"2.0"	"293.0"	"287.1"	""	"515"	"39"	"34.000"	"27.000"	"0.0030463320059923"	""	"0.0001889"	"0.0008601"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVPSIK"	"[K].aAVPSIk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"572.37805"	"1143.74883"	"1143.75017"	"-1.17"	"-0.00067"	"6/48"	"6"	"48"	"45235013.1623535"	"HCD"	"MS2"	"2.602296"	"652.4"	"25.201"	"35.4145"	"8939"	"8939"	"8922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1036.8"	""	"979.5"	""	"942.3"	""	"947.8"	""	"1080.1"	"1187.2"	""	"242"	"27"	"30.000"	"23.000"	"0.0233230514496103"	"21"	"0.002829"	"0.04741"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVPSIK"	"[K].aAVPSIk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"572.37854"	"1143.74980"	"1143.75017"	"-0.32"	"-0.00018"	"6/48"	"6"	"48"	"42656361.7717285"	"HCD"	"MS2"	"3.558652"	"722.2"	"28.958"	"35.3661"	"8876"	"8876"	"8859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1181.7"	""	"1036.9"	""	"1055.8"	""	"1055.9"	""	"1196.6"	"1312.0"	""	"242"	"28"	"30.000"	"23.000"	"0.019001389932436"	"22"	"0.002297"	"0.034"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTIVGK"	"[K].aPTIVGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"572.37854"	"1143.74980"	"1143.75017"	"-0.32"	"-0.00018"	"6/48"	"6"	"48"	"8676093.58795166"	"HCD"	"MS2"	"11.82063"	"609.3"	"100.000"	"34.5014"	"8521"	"8521"	"8499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"718.3"	""	"692.1"	""	"748.9"	""	"1081.7"	"0.6"	"1271.2"	"1274.2"	""	"242"	"34"	"30.000"	"23.000"	"0.00447492097534122"	"23"	"0.0006037"	"0.004458"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTIVGK"	"[K].aPTIVGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"572.37860"	"1143.74993"	"1143.75017"	"-0.21"	"-0.00012"	"6/48"	"6"	"48"	"8602964.27508545"	"HCD"	"MS2"	"9.392081"	"554.3"	"97.282"	"34.5724"	"8593"	"8593"	"8570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"650.2"	""	"680.8"	""	"669.2"	""	"974.6"	"8.1"	"1144.7"	"1136.2"	""	"242"	"36"	"30.000"	"23.000"	"0.00296336652263214"	"20"	"0.0006037"	"0.004119"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVVLAK"	"[R].gVVVLAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"572.39612"	"1143.78496"	"1143.78655"	"-1.39"	"-0.00080"	"12/50"	"12"	"50"	"5910675.45758057"	"HCD"	"MS2"	"25.30233"	"454.5"	"100.000"	"39.7299"	"10710"	"10710"	"10686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"640.4"	""	"691.0"	""	"700.0"	""	"675.3"	""	"754.9"	"843.5"	""	"38"	"39"	"22.000"	"15.000"	"0.000214167516673347"	""	"0.0006037"	"0.004567"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAIVAK"	"[R].lAAIVAk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"572.39624"	"1143.78520"	"1143.78655"	"-1.18"	"-0.00067"	"10/50"	"10"	"50"	"20587644.392334"	"HCD"	"MS2"	"38.43082"	"989.2"	"68.849"	"42.6645"	"11863"	"11863"	"11836"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1295.2"	""	"1286.1"	""	"1336.9"	""	"1661.4"	""	"1918.9"	"1883.0"	""	"38"	"30"	"22.000"	"15.000"	"0.00193532363730282"	"14"	"0.003507"	"0.08192"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVVLAK"	"[R].gVVVLAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"572.39630"	"1143.78533"	"1143.78655"	"-1.07"	"-0.00061"	"12/50"	"12"	"50"	"6052288.60943604"	"HCD"	"MS2"	"20.18757"	"439.9"	"100.000"	"39.6159"	"10620"	"10620"	"10598"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"619.7"	""	"664.2"	""	"671.9"	""	"641.9"	"1.0"	"744.8"	"821.1"	""	"38"	"42"	"22.000"	"15.000"	"0.000129644351886917"	""	"0.00119"	"0.01572"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVVLAK"	"[R].gVVVLAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"572.39648"	"1143.78569"	"1143.78655"	"-0.75"	"-0.00043"	"6/50"	"6"	"50"	"94313850.9724121"	"HCD"	"MS2"	"6.66985"	"1317.1"	"20.522"	"39.2951"	"10488"	"10488"	"10470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2014.6"	""	"2156.7"	""	"2127.2"	""	"1845.8"	""	"2010.6"	"2299.8"	""	"38"	"36"	"22.000"	"15.000"	"0.000524509792681865"	""	"0.005916"	"0.1969"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAIILAK"	"[R].gAIILAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"572.39685"	"1143.78642"	"1143.78655"	"-0.11"	"-0.00006"	"12/50"	"12"	"50"	"24417658.1472778"	"HCD"	"MS2"	"7.78391"	"1374.4"	"91.108"	"40.7407"	"11121"	"11121"	"11101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1944.8"	""	"2164.5"	""	"2215.7"	""	"2041.1"	""	"2350.9"	"2293.2"	""	"38"	"39"	"22.000"	"15.000"	"0.000256893787006913"	""	"0.00252"	"0.03827"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAIILAK"	"[R].gAIILAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"572.39691"	"1143.78655"	"1143.78655"	"0.00"	"0.00000"	"12/50"	"12"	"50"	"20749401.2553101"	"HCD"	"MS2"	"13.17407"	"1329.0"	"100.000"	"40.5638"	"11005"	"11005"	"10981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1887.5"	""	"2072.2"	""	"2139.0"	""	"1992.3"	"2.7"	"2286.7"	"2192.5"	""	"38"	"39"	"22.000"	"15.000"	"0.000260467535571322"	""	"0.002132"	"0.03206"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVVLAK"	"[R].gVVVLAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"572.39697"	"1143.78667"	"1143.78655"	"0.10"	"0.00006"	"6/50"	"6"	"50"	"112262668.093018"	"HCD"	"MS2"	"3.271972"	"1323.4"	"18.823"	"39.4045"	"10576"	"10576"	"10558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2052.3"	""	"2157.2"	""	"2179.0"	""	"1837.6"	""	"1968.8"	"2318.5"	""	"38"	"36"	"22.000"	"15.000"	"0.000506703146259081"	""	"0.006688"	"0.2489"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFYSIMR"	"[K].vFYSIMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"572.82227"	"1144.63725"	"1144.63862"	"-1.19"	"-0.00068"	"5/48"	"5"	"48"	"7764459.33129883"	"HCD"	"MS2"	"0"	"321.6"	"72.366"	"49.7355"	"14736"	"14736"	"14719"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"499.1"	""	"499.2"	""	"500.7"	""	"401.4"	"2.2"	"576.2"	"565.0"	""	"583"	"19"	"34.000"	"27.000"	"0.382506270564098"	"16"	"0.001058"	"0.01332"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLLDLAR"	"[R].qSLLDLAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"3"	"572.84705"	"1144.68682"	"1144.68874"	"-1.68"	"-0.00096"	"6/76"	"6"	"76"	"3413274.85150146"	"HCD"	"MS2"	"0"	"229.5"	"100.000"	"44.4354"	"12576"	"12576"	"12555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"304.5"	""	"260.2"	""	"318.8"	""	"366.1"	"4.2"	"437.0"	"486.2"	""	"637"	"10"	"35.000"	"28.000"	"3.21447044215424"	"19"	"0.0008453"	"0.008335"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLWSQR"	"[K].lLLWSQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"572.85437"	"1144.70146"	"1144.70399"	"-2.21"	"-0.00127"	"5/50"	"5"	"50"	"5318940.72033691"	"HCD"	"MS2"	"0"	"321.8"	"100.000"	"53.1980"	"16140"	"16140"	"16130"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"415.4"	""	"466.3"	""	"480.1"	""	"492.8"	""	"579.5"	"619.1"	""	"583"	"20"	"34.000"	"27.000"	"0.303835530668148"	"26"	"0.00103"	"0.01156"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLWSQR"	"[K].lLLWSQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"572.85455"	"1144.70183"	"1144.70399"	"-1.89"	"-0.00108"	"5/50"	"5"	"50"	"4777244.31115723"	"HCD"	"MS2"	"0"	"288.2"	"100.000"	"53.4089"	"16277"	"16277"	"16264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"384.3"	""	"387.0"	""	"435.4"	""	"424.3"	""	"525.4"	"579.1"	""	"569"	"20"	"34.000"	"27.000"	"0.303446596490009"	"26"	"0.001718"	"0.02341"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLQWLR"	"[R].iSLQWLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"572.85553"	"1144.70378"	"1144.70399"	"-0.19"	"-0.00011"	"5/54"	"5"	"54"	"16289308.8828735"	"HCD"	"MS2"	"30.79724"	"611.9"	"77.216"	"59.3491"	"18634"	"18634"	"18617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"584.9"	""	"709.3"	""	"658.2"	""	"1046.4"	""	"1349.8"	"1476.0"	""	"694"	"30"	"35.000"	"28.000"	"0.0349405289091576"	""	"0.001125"	"0.01513"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLQWLR"	"[R].iSLQWLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"572.85559"	"1144.70391"	"1144.70399"	"-0.08"	"-0.00004"	"6/54"	"6"	"54"	"3240695.20324707"	"HCD"	"MS2"	"32.74983"	"150.1"	"100.000"	"59.8482"	"18891"	"18891"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.0"	""	"186.4"	""	"195.4"	""	"216.7"	"1.8"	"302.1"	"346.4"	""	"693"	"8"	"35.000"	"28.000"	"5.14876700052448"	"17"	"0.0007076"	"0.006872"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGSWLAIR"	"[K].lGSWLAIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"572.85596"	"1144.70464"	"1144.70399"	"0.56"	"0.00032"	"5/56"	"5"	"56"	"3555357.89678955"	"HCD"	"MS2"	"14.58081"	"179.9"	"100.000"	"59.8480"	"18838"	"18838"	"18809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.2"	""	"271.3"	""	"249.6"	""	"280.8"	""	"293.4"	"380.4"	""	"693"	"16"	"35.000"	"28.000"	"0.799287900891504"	"25"	"0.0003571"	"0.001526"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLQWLR"	"[R].iSLQWLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"572.85614"	"1144.70500"	"1144.70399"	"0.88"	"0.00050"	"5/54"	"5"	"54"	"13665959.9573975"	"HCD"	"MS2"	"25.08039"	"684.3"	"100.000"	"59.4868"	"18743"	"18743"	"18725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"662.8"	""	"843.2"	""	"740.0"	""	"1158.2"	"2.4"	"1504.6"	"1599.7"	""	"693"	"28"	"35.000"	"28.000"	"0.0614756655128442"	"28"	"0.0009092"	"0.009646"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGGLQK"	"[R].lAGGLQk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"572.87604"	"1144.74480"	"1144.74541"	"-0.54"	"-0.00031"	"6/52"	"6"	"52"	"7763188.43786621"	"HCD"	"MS2"	"6.955471"	"607.9"	"100.000"	"35.0425"	"8743"	"8743"	"8718"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"789.8"	""	"828.7"	""	"757.1"	""	"989.7"	""	"1172.3"	"1237.7"	""	"245"	"22"	"30.000"	"23.000"	"0.0814959616347134"	"16"	"0.0008453"	"0.008375"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGGLQK"	"[R].lAGGLQk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"572.87604"	"1144.74480"	"1144.74541"	"-0.54"	"-0.00031"	"6/52"	"6"	"52"	"7911910.1739502"	"HCD"	"MS2"	"13.55631"	"642.3"	"100.000"	"35.1184"	"8817"	"8817"	"8794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"830.6"	""	"849.4"	""	"802.6"	""	"1022.9"	""	"1272.7"	"1320.3"	""	"245"	"24"	"30.000"	"23.000"	"0.0474390615028981"	"18"	"0.0008125"	"0.00768"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGNALK"	"[K].aIGNALk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31399"	"ATP synthase subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3"	"P31399"	"ATP synthase subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"572.87640"	"1144.74553"	"1144.74541"	"0.10"	"0.00006"	"12/56"	"12"	"56"	"13625354.5477295"	"HCD"	"MS2"	"6.71669"	"790.2"	"82.579"	"34.3453"	"8500"	"8500"	"8477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1017.1"	""	"1070.6"	""	"1068.0"	""	"1293.5"	""	"1450.4"	"1593.9"	""	"245"	"24"	"30.000"	"23.000"	"0.0514204755388984"	"20"	"0.001686"	"0.02301"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGNALK"	"[K].aIGNALk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31399"	"ATP synthase subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3"	"P31399"	"ATP synthase subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"572.87646"	"1144.74565"	"1144.74541"	"0.21"	"0.00012"	"12/56"	"12"	"56"	"13561113.0872803"	"HCD"	"MS2"	"20.1121"	"836.8"	"86.185"	"34.2652"	"8424"	"8424"	"8405"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1026.4"	""	"1139.0"	""	"1147.6"	""	"1431.0"	"2.4"	"1527.4"	"1659.6"	""	"245"	"24"	"30.000"	"23.000"	"0.0521358056088835"	"20"	"0.001217"	"0.01675"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWVAWQR"	"[R].aWVAWQR.[H]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"573.32355"	"1145.63982"	"1145.64173"	"-1.67"	"-0.00096"	"5/52"	"5"	"52"	"222601741.458008"	"HCD"	"MS2"	"3.275775"	"770.9"	"7.980"	"43.0538"	"12067"	"12067"	"12051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1004.3"	""	"988.1"	""	"994.4"	""	"1260.4"	""	"1427.8"	"1643.2"	""	"720"	"20"	"35.000"	"28.000"	"0.372651180004563"	"22"	"0.008558"	"0.3642"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWVAWQR"	"[R].aWVAWQR.[H]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"573.32361"	"1145.63994"	"1145.64173"	"-1.56"	"-0.00089"	"5/52"	"5"	"52"	"59167908.7529297"	"HCD"	"MS2"	"0"	"350.0"	"12.823"	"43.3262"	"12175"	"12175"	"12166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"422.5"	""	"437.3"	""	"461.5"	""	"586.3"	"1.0"	"648.5"	"763.7"	""	"744"	"20"	"35.000"	"28.000"	"0.398605181548389"	"22"	"0.004346"	"0.1209"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWVAWQR"	"[R].aWVAWQR.[H]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"573.32367"	"1145.64006"	"1145.64173"	"-1.45"	"-0.00083"	"5/52"	"5"	"52"	"10314265.6606445"	"HCD"	"MS2"	"24.25072"	"397.9"	"74.656"	"43.3507"	"12134"	"12134"	"12117"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"506.9"	""	"494.0"	""	"493.7"	""	"665.7"	""	"763.5"	"858.9"	""	"754"	"13"	"35.000"	"28.000"	"2.0199533988253"	"18"	"0.001217"	"0.01678"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWVAWQR"	"[R].aWVAWQR.[H]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"573.32367"	"1145.64006"	"1145.64173"	"-1.45"	"-0.00083"	"5/52"	"5"	"52"	"7013470.27044678"	"HCD"	"MS2"	"31.4354"	"367.6"	"100.000"	"43.6673"	"12312"	"12312"	"12287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"478.3"	""	"461.5"	""	"481.9"	""	"603.3"	""	"719.6"	"746.6"	""	"754"	"13"	"35.000"	"28.000"	"1.9025730918145"	"17"	"0.001058"	"0.0139"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWVAWQR"	"[R].aWVAWQR.[H]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"573.32367"	"1145.64006"	"1145.64173"	"-1.45"	"-0.00083"	"5/52"	"5"	"52"	"149779396.915039"	"HCD"	"MS2"	"9.879416"	"858.6"	"12.892"	"42.7929"	"11916"	"11916"	"11900"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1115.3"	""	"1134.9"	""	"1093.7"	""	"1418.3"	""	"1578.3"	"1802.8"	""	"754"	"20"	"35.000"	"28.000"	"0.393859522646242"	"23"	"0.006061"	"0.2117"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWVAWQR"	"[R].aWVAWQR.[H]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"573.32373"	"1145.64018"	"1145.64173"	"-1.35"	"-0.00077"	"5/52"	"5"	"52"	"90702189.5053711"	"HCD"	"MS2"	"0.9783679"	"341.7"	"8.665"	"43.0631"	"12022"	"12022"	"12013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"416.9"	""	"454.7"	""	"427.3"	""	"553.7"	"2.1"	"643.3"	"744.4"	""	"754"	"20"	"35.000"	"28.000"	"0.384894185357795"	"23"	"0.005855"	"0.1907"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMLLTDPR"	"[R].aMLLTDPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"573.33057"	"1145.65386"	"1145.65500"	"-0.99"	"-0.00057"	"5/58"	"5"	"58"	"8203883.43664551"	"HCD"	"MS2"	"30.22751"	"437.4"	"100.000"	"38.7235"	"10297"	"10297"	"10270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"498.0"	"3.2"	"467.0"	""	"522.1"	""	"756.3"	"14.4"	"938.6"	"958.5"	""	"878"	"8"	"36.000"	"29.000"	"6.92571347398014"	"15"	"0.007595"	"0.3004"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"573.33972"	"1145.67217"	"1145.67275"	"-0.51"	"-0.00029"	"6/62"	"6"	"62"	"8407323.86431885"	"HCD"	"MS2"	"54.94963"	"636.7"	"100.000"	"37.5616"	"9820"	"9820"	"9793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"888.2"	""	"819.4"	""	"881.4"	""	"1056.2"	"0.4"	"1179.3"	"1208.6"	""	"818"	"20"	"36.000"	"29.000"	"0.383462860832685"	"25"	"0.001966"	"0.02842"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"573.36719"	"1145.72710"	"1145.72943"	"-2.04"	"-0.00117"	"6/48"	"6"	"48"	"4857083.21374512"	"HCD"	"MS2"	"0"	"384.5"	"100.000"	"33.9304"	"8290"	"8290"	"8272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"425.6"	""	"393.5"	""	"444.5"	""	"781.1"	"0.1"	"798.0"	"810.0"	""	"279"	"36"	"31.000"	"24.000"	"0.0034401248754419"	"22"	"0.0006037"	"0.005483"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"382.58072"	"1145.72760"	"1145.72943"	"-1.59"	"-0.00061"	"5/48"	"5"	"48"	"45470991.3096924"	"HCD"	"MS2"	"22.84811"	"1018.3"	"36.594"	"35.7721"	"9042"	"9042"	"9019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"941.3"	""	"889.9"	""	"1033.0"	""	"2293.4"	""	"2345.0"	"2199.9"	""	"275"	"21"	"31.000"	"24.000"	"0.106243580450659"	"19"	"0.001966"	"0.02769"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"3"	"573.36774"	"1145.72820"	"1145.72943"	"-1.08"	"-0.00062"	"4/48"	"4"	"48"	"110060.92010498"	"HCD"	"MS2"	"17.91629"	"6.1"	"100.000"	"115.4653"	"36960"	"36960"	"36958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.0"	""	"8.7"	""	"8.5"	""	"11.5"	""	"13.0"	"11.4"	""	"275"	"8"	"31.000"	"24.000"	"2.11496263041667"	"15"	"0.004291"	"0.1116"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"573.36774"	"1145.72820"	"1145.72943"	"-1.08"	"-0.00062"	"6/48"	"6"	"48"	"4634617.21289063"	"HCD"	"MS2"	"0"	"370.0"	"100.000"	"33.9511"	"8342"	"8342"	"8330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"401.9"	""	"392.4"	""	"406.2"	""	"786.4"	""	"761.2"	"770.3"	""	"275"	"36"	"31.000"	"24.000"	"0.00332891493926225"	"22"	"0.0004557"	"0.002582"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"573.36774"	"1145.72820"	"1145.72943"	"-1.08"	"-0.00062"	"6/48"	"6"	"48"	"14974386.3987427"	"HCD"	"MS2"	"45.19891"	"778.6"	"67.292"	"36.4686"	"9328"	"9328"	"9306"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1121.2"	""	"917.1"	""	"1028.5"	""	"1417.0"	""	"1419.8"	"1476.8"	""	"275"	"18"	"31.000"	"24.000"	"0.242271706381599"	"23"	"0.001217"	"0.01833"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.5217"	"0.0000"	"1"	"1"	"1"	"382.58093"	"1145.72824"	"1145.72943"	"-1.03"	"-0.00040"	"5/48"	"5"	"48"	"49739458.9663086"	"HCD"	"MS2"	"13.79113"	"1141.1"	"37.500"	"35.8476"	"9116"	"9116"	"9097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1013.3"	""	"956.6"	""	"1180.3"	""	"2633.8"	""	"2555.2"	"2528.2"	""	"275"	"23"	"31.000"	"24.000"	"0.0650582981072036"	""	"0.002361"	"0.03428"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"382.58099"	"1145.72843"	"1145.72943"	"-0.88"	"-0.00033"	"5/48"	"5"	"48"	"2976698.4208374"	"HCD"	"MS2"	"15.54538"	"217.0"	"100.000"	"36.1388"	"9193"	"9193"	"9162"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.7"	""	"215.3"	""	"232.7"	""	"466.1"	""	"465.1"	"492.6"	""	"275"	"18"	"31.000"	"24.000"	"0.219939228934517"	"17"	"0.001686"	"0.02302"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"573.36786"	"1145.72844"	"1145.72943"	"-0.86"	"-0.00049"	"10/48"	"10"	"48"	"72848416.7412109"	"HCD"	"MS2"	"5.513959"	"507.7"	"10.078"	"36.1436"	"9195"	"9195"	"9178"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"443.8"	""	"465.7"	""	"559.5"	""	"1093.5"	""	"1158.5"	"1118.0"	""	"275"	"30"	"31.000"	"24.000"	"0.0148013966874102"	""	"0.003788"	"0.08937"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"573.36792"	"1145.72856"	"1145.72943"	"-0.76"	"-0.00043"	"5/48"	"5"	"48"	"14778817.7169189"	"HCD"	"MS2"	"50.63633"	"659.5"	"57.331"	"36.5900"	"9421"	"9421"	"9401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"921.8"	""	"804.5"	""	"868.4"	""	"1160.1"	""	"1223.8"	"1273.8"	""	"275"	"17"	"31.000"	"24.000"	"0.260797064166533"	"20"	"0.001945"	"0.02756"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"382.58109"	"1145.72870"	"1145.72943"	"-0.64"	"-0.00024"	"5/48"	"5"	"48"	"4306401.04071045"	"HCD"	"MS2"	"48.48191"	"299.6"	"100.000"	"36.1775"	"9252"	"9252"	"9225"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.4"	""	"287.6"	""	"330.4"	""	"643.7"	""	"661.3"	"652.4"	""	"275"	"18"	"31.000"	"24.000"	"0.218425177932195"	"16"	"0.004007"	"0.1021"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"573.36829"	"1145.72930"	"1145.72943"	"-0.12"	"-0.00007"	"6/48"	"6"	"48"	"34904564.2268066"	"HCD"	"MS2"	"38.97029"	"842.9"	"30.927"	"37.1293"	"9642"	"9642"	"9622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"754.7"	""	"652.5"	""	"859.3"	""	"1135.0"	""	"3070.0"	"1657.0"	""	"278"	"25"	"31.000"	"24.000"	"0.0407394161089795"	""	"0.00252"	"0.03821"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"573.36829"	"1145.72930"	"1145.72943"	"-0.12"	"-0.00007"	"6/48"	"6"	"48"	"35834005.8145752"	"HCD"	"MS2"	"39.91731"	"847.1"	"31.231"	"37.0076"	"9549"	"9549"	"9530"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"734.7"	""	"663.5"	""	"848.9"	""	"1138.8"	""	"3158.2"	"1625.9"	""	"278"	"26"	"31.000"	"24.000"	"0.0391755227445759"	""	"0.003013"	"0.05811"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGDAAK"	"[R].lIGDAAk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"4"	"5"	"P63018; P0DMW0; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"573.36835"	"1145.72942"	"1145.72943"	"-0.01"	"-0.00001"	"6/48"	"6"	"48"	"65325708.5148926"	"HCD"	"MS2"	"0"	"936.9"	"21.632"	"35.5749"	"9004"	"9004"	"8986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1386.6"	""	"1246.8"	""	"1309.4"	""	"1587.2"	""	"1615.9"	"1737.0"	""	"269"	"24"	"31.000"	"24.000"	"0.0560689320767601"	""	"0.002981"	"0.05637"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGDAAK"	"[R].lIGDAAk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"4"	"5"	"P63018; P0DMW0; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"573.36841"	"1145.72954"	"1145.72943"	"0.10"	"0.00005"	"6/48"	"6"	"48"	"63999053.505127"	"HCD"	"MS2"	"0.265078"	"1249.8"	"29.880"	"35.5264"	"8941"	"8941"	"8923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1848.6"	""	"1689.0"	""	"1738.7"	""	"2073.4"	""	"2197.0"	"2291.6"	""	"269"	"24"	"31.000"	"24.000"	"0.0540408640591824"	""	"0.002953"	"0.05353"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"573.36853"	"1145.72978"	"1145.72943"	"0.31"	"0.00018"	"10/48"	"10"	"48"	"89364443.2792969"	"HCD"	"MS2"	"6.186437"	"685.8"	"11.790"	"36.1914"	"9258"	"9258"	"9241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"618.2"	""	"654.4"	""	"700.4"	""	"1473.4"	""	"1568.0"	"1523.4"	""	"269"	"28"	"31.000"	"24.000"	"0.0204043274423281"	""	"0.003762"	"0.08784"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASLLGK"	"[K].vASLLGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.38593"	"1145.76457"	"1145.76582"	"-1.08"	"-0.00062"	"6/48"	"6"	"48"	"6952316.40753174"	"HCD"	"MS2"	"17.75229"	"486.7"	"100.000"	"46.1153"	"13306"	"13306"	"13284"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"584.0"	""	"571.2"	""	"627.4"	""	"864.2"	""	"955.7"	"1021.5"	""	"68"	"14"	"25.000"	"18.000"	"0.147054702551903"	"13"	"0.001217"	"0.01783"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSIVLK"	"[R].aGSIVLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"573.38605"	"1145.76482"	"1145.76582"	"-0.87"	"-0.00050"	"6/48"	"6"	"48"	"26269006.404541"	"HCD"	"MS2"	"31.15115"	"1519.8"	"82.592"	"37.5463"	"9770"	"9770"	"9752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2263.4"	""	"2050.5"	""	"2106.3"	""	"2453.5"	""	"2742.0"	"2781.5"	""	"68"	"34"	"25.000"	"18.000"	"0.0013504512681961"	""	"0.002361"	"0.03482"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSIVLK"	"[R].aGSIVLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"573.38611"	"1145.76494"	"1145.76582"	"-0.76"	"-0.00044"	"6/48"	"6"	"48"	"11302872.4051514"	"HCD"	"MS2"	"0"	"378.2"	"44.873"	"37.7771"	"9908"	"9908"	"9889"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"516.4"	""	"524.0"	""	"502.3"	""	"611.4"	""	"699.3"	"737.2"	""	"68"	"37"	"25.000"	"18.000"	"0.000647856644107503"	""	"0.001389"	"0.01913"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASLLGK"	"[K].vASLLGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"573.38672"	"1145.76616"	"1145.76582"	"0.30"	"0.00017"	"6/48"	"6"	"48"	"6119814.47393799"	"HCD"	"MS2"	"7.339107"	"434.3"	"100.000"	"45.8235"	"13138"	"13138"	"13118"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"529.5"	""	"530.8"	""	"593.1"	""	"731.3"	""	"829.5"	"917.3"	""	"68"	"32"	"25.000"	"18.000"	"0.00234141780757054"	""	"0.0006396"	"0.006205"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYAYLFK"	"[M].aYAYLFk.[Y]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"573.82281"	"1146.63835"	"1146.63966"	"-1.14"	"-0.00066"	"4/50"	"4"	"50"	"2313982.33654785"	"HCD"	"MS2"	"20.26263"	"89.9"	"100.000"	"74.5637"	"24890"	"24890"	"24863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.4"	""	"137.5"	""	"135.0"	""	"150.5"	""	"148.3"	"166.4"	""	"890"	"26"	"36.000"	"29.000"	"0.110499423185653"	"21"	"0.003286"	"0.07385"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYAYLFK"	"[M].aYAYLFk.[Y]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"573.82355"	"1146.63982"	"1146.63966"	"0.13"	"0.00008"	"4/50"	"4"	"50"	"3546047.58978271"	"HCD"	"MS2"	"3.118807"	"132.2"	"100.000"	"74.6013"	"24853"	"24853"	"24833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.9"	""	"182.3"	""	"185.8"	""	"213.6"	""	"226.5"	"237.6"	""	"905"	"26"	"36.000"	"29.000"	"0.106076353893226"	"21"	"0.001058"	"0.01398"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISGWVSR"	"[K].lISGWVSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"573.84515"	"1146.68303"	"1146.68326"	"-0.20"	"-0.00011"	"5/64"	"5"	"64"	"5747680.70233154"	"HCD"	"MS2"	"17.15896"	"298.2"	"100.000"	"46.9443"	"13597"	"13597"	"13576"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"426.4"	""	"416.0"	""	"426.9"	""	"475.0"	""	"527.3"	"555.6"	""	"779"	"29"	"35.000"	"28.000"	"0.052663226336417"	"27"	"0.0003146"	"0.001412"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISGWVSR"	"[K].lISGWVSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"573.84558"	"1146.68389"	"1146.68326"	"0.55"	"0.00031"	"5/64"	"5"	"64"	"5745823.74090576"	"HCD"	"MS2"	"24.83858"	"296.8"	"100.000"	"47.1919"	"13747"	"13747"	"13730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"436.3"	""	"409.9"	""	"415.3"	""	"475.1"	""	"535.1"	"539.6"	""	"778"	"29"	"35.000"	"28.000"	"0.0532046513156785"	""	"0.0002277"	"0.001315"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSFLGR"	"[R].eLPSFLGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"574.33643"	"1147.66557"	"1147.66727"	"-1.48"	"-0.00085"	"7/62"	"7"	"62"	"8033327.90222168"	"HCD"	"MS2"	"50.28868"	"393.4"	"100.000"	"49.0061"	"14441"	"14441"	"14415"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"492.3"	""	"510.1"	""	"531.2"	""	"680.1"	"2.8"	"722.0"	"791.2"	""	"629"	"15"	"34.000"	"27.000"	"1.06321390986781"	"23"	"0.0004166"	"0.002128"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSFLGR"	"[R].eLPSFLGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"574.33679"	"1147.66631"	"1147.66727"	"-0.84"	"-0.00048"	"7/62"	"7"	"62"	"9782317.6083374"	"HCD"	"MS2"	"19.7348"	"472.2"	"100.000"	"49.3134"	"14614"	"14614"	"14590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"616.0"	""	"632.9"	""	"647.0"	""	"812.9"	""	"839.6"	"932.7"	""	"626"	"16"	"34.000"	"27.000"	"0.710467698639636"	"20"	"0.0003839"	"0.001926"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLLENF"	"[R].iLGLLENF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"574.34955"	"1147.69182"	"1147.69243"	"-0.53"	"-0.00030"	"6/56"	"6"	"56"	"240218.199829102"	"HCD"	"MS2"	"6.486901"	"5.2"	"100.000"	"101.8750"	"34593"	"34593"	"34591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"4.8"	""	"9.8"	""	"10.1"	""	"10.6"	"10.5"	""	"483"	"41"	"33.000"	"26.000"	"0.00180267375156031"	"17"	"0.0003839"	"0.002037"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLLENF"	"[R].iLGLLENF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"574.34967"	"1147.69206"	"1147.69243"	"-0.32"	"-0.00018"	"6/56"	"6"	"56"	"142784.119384766"	"HCD"	"MS2"	"12.9573"	"5.1"	"100.000"	"101.8099"	"34587"	"34587"	"34585"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"7.8"	""	"8.7"	""	"11.2"	""	"6.6"	"10.6"	""	"490"	"44"	"33.000"	"26.000"	"0.00105722173822803"	"21"	"0.000523"	"0.002791"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLLENF"	"[R].iLGLLENF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.34973"	"1147.69219"	"1147.69243"	"-0.21"	"-0.00012"	"5/56"	"5"	"56"	"194066.520812988"	"HCD"	"MS2"	"13.74143"	"4.9"	"100.000"	"101.6209"	"34533"	"34533"	"34528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.3"	""	"7.1"	""	"5.8"	""	"9.3"	""	"9.8"	"10.4"	""	"490"	"29"	"33.000"	"26.000"	"0.0321488975259705"	"14"	"0.0006037"	"0.004622"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLLENF"	"[R].iLGLLENF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.34979"	"1147.69231"	"1147.69243"	"-0.10"	"-0.00006"	"5/56"	"5"	"56"	"167335.242797852"	"HCD"	"MS2"	"14.9382"	"5.9"	"100.000"	"102.0683"	"34642"	"34642"	"34640"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.1"	""	"8.9"	""	"8.2"	""	"11.3"	""	"12.5"	"10.3"	""	"490"	"29"	"33.000"	"26.000"	"0.029523380539109"	"14"	"0.0006037"	"0.005508"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGATAEK"	"[R].lGATAEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"574.35760"	"1147.70793"	"1147.70869"	"-0.66"	"-0.00038"	"5/52"	"5"	"52"	"6876343.34686279"	"HCD"	"MS2"	"20.3749"	"541.3"	"100.000"	"29.6539"	"6549"	"6549"	"6528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"718.0"	""	"687.0"	""	"694.0"	""	"855.5"	""	"1040.6"	"1146.5"	""	"355"	"19"	"32.000"	"25.000"	"0.220901343589421"	"21"	"0.00103"	"0.01229"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGATAEK"	"[R].lGATAEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"574.35797"	"1147.70867"	"1147.70869"	"-0.03"	"-0.00001"	"6/52"	"6"	"52"	"5348565.37359619"	"HCD"	"MS2"	"18.69761"	"422.5"	"100.000"	"29.7393"	"6625"	"6625"	"6605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"536.0"	""	"482.6"	""	"531.7"	""	"701.2"	""	"854.1"	"916.6"	""	"355"	"17"	"32.000"	"25.000"	"0.335890992309483"	"20"	"0.0008453"	"0.007945"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVATSK"	"[K].aIVATSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"574.37628"	"1147.74529"	"1147.74508"	"0.18"	"0.00010"	"6/50"	"6"	"50"	"11024368.1802368"	"HCD"	"MS2"	"13.86001"	"750.2"	"100.000"	"30.9721"	"7087"	"7087"	"7064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"773.4"	""	"892.4"	""	"858.1"	""	"1401.3"	"3.5"	"1593.9"	"1607.7"	""	"110"	"36"	"27.000"	"20.000"	"0.0014235171033342"	""	"0.0006737"	"0.006644"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVATSK"	"[K].aIVATSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"574.37646"	"1147.74565"	"1147.74508"	"0.50"	"0.00029"	"10/50"	"10"	"50"	"11265387.583374"	"HCD"	"MS2"	"0"	"756.5"	"100.000"	"31.0848"	"7175"	"7175"	"7152"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"770.4"	""	"897.7"	""	"874.8"	""	"1408.3"	"8.6"	"1616.9"	"1614.2"	""	"110"	"29"	"27.000"	"20.000"	"0.00655183104415056"	""	"0.0009404"	"0.009899"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APAMFNIR"	"[K].aPAMFNIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.82556"	"1148.64385"	"1148.64477"	"-0.80"	"-0.00046"	"7/62"	"7"	"62"	"10829198.0305786"	"HCD"	"MS2"	"21.91014"	"603.5"	"100.000"	"42.1935"	"11670"	"11670"	"11644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1063.9"	""	"1023.8"	""	"1066.3"	""	"756.9"	"6.8"	"922.6"	"855.4"	""	"712"	"17"	"35.000"	"28.000"	"0.754136564148467"	"14"	"0.0006037"	"0.004131"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APAMFNIR"	"[K].aPAMFNIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.82568"	"1148.64409"	"1148.64477"	"-0.59"	"-0.00034"	"5/62"	"5"	"62"	"10699246.6853027"	"HCD"	"MS2"	"30.03045"	"567.4"	"100.000"	"42.4161"	"11805"	"11805"	"11779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1002.6"	""	"978.3"	""	"999.3"	""	"711.0"	"9.1"	"862.1"	"791.7"	""	"707"	"18"	"35.000"	"28.000"	"0.597570869335894"	"14"	"0.0006037"	"0.003713"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGGNSK"	"[K].dLGGNSk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"3"	"574.83661"	"1148.66594"	"1148.66756"	"-1.41"	"-0.00081"	"5/62"	"5"	"62"	"909605.739990234"	"HCD"	"MS2"	"48.86282"	"99.4"	"100.000"	"26.6660"	"5412"	"5412"	"5381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.7"	""	"126.2"	""	"150.8"	""	"146.3"	""	"181.0"	"172.8"	""	"654"	"11"	"35.000"	"28.000"	"2.62753041954697"	"23"	"0.0003839"	"0.001753"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQILWFR"	"[R].gQILWFR.[G]"	"N-Term(TMT6plex)"	"1"	"3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11506; Q64568; P11505"	"Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2b2 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"574.84210"	"1148.67693"	"1148.67778"	"-0.74"	"-0.00043"	"4/60"	"4"	"60"	"2885395.25170898"	"HCD"	"MS2"	"21.83314"	"164.6"	"100.000"	"54.4008"	"16669"	"16669"	"16651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.6"	""	"204.6"	""	"223.2"	""	"289.4"	"5.6"	"330.1"	"333.4"	""	"580"	"16"	"34.000"	"27.000"	"0.702098423553492"	"21"	"0.0009404"	"0.01008"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQILWFR"	"[R].gQILWFR.[G]"	"N-Term(TMT6plex)"	"1"	"3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11506; Q64568; P11505"	"Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2b2 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"574.84229"	"1148.67729"	"1148.67778"	"-0.42"	"-0.00024"	"4/60"	"4"	"60"	"2756696.55682373"	"HCD"	"MS2"	"19.82929"	"166.7"	"100.000"	"54.1280"	"16505"	"16505"	"16477"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.1"	""	"211.3"	""	"223.1"	""	"290.6"	""	"336.7"	"337.1"	""	"580"	"14"	"34.000"	"27.000"	"1.15983977430718"	"20"	"0.001966"	"0.02832"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGGAASK"	"[K].vTGGAASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"574.85480"	"1148.70232"	"1148.70394"	"-1.42"	"-0.00081"	"7/66"	"7"	"66"	"2275578.39807129"	"HCD"	"MS2"	"0"	"159.7"	"100.000"	"25.2361"	"4796"	"4796"	"4768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.5"	""	"249.3"	""	"262.3"	""	"251.6"	""	"298.2"	"241.6"	""	"304"	"36"	"31.000"	"24.000"	"0.00349014594513079"	""	"0.0001889"	"0.0007389"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGGAASK"	"[K].vTGGAASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"574.85565"	"1148.70403"	"1148.70394"	"0.07"	"0.00004"	"7/66"	"7"	"66"	"2182546.92608643"	"HCD"	"MS2"	"0"	"167.4"	"100.000"	"25.3222"	"4866"	"4866"	"4839"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.6"	""	"248.8"	""	"275.3"	""	"279.4"	""	"303.4"	"267.0"	""	"305"	"38"	"31.000"	"24.000"	"0.00268083351128701"	""	"0.0001889"	"0.0004324"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGEYGLR"	"[K].lIGEYGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"575.34351"	"1149.67974"	"1149.68292"	"-2.77"	"-0.00159"	"6/56"	"6"	"56"	"5310398.76593018"	"HCD"	"MS2"	"32.47135"	"330.2"	"100.000"	"43.5872"	"12279"	"12279"	"12258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"442.3"	""	"444.0"	""	"456.4"	""	"525.3"	"4.0"	"652.7"	"606.1"	""	"483"	"31"	"33.000"	"26.000"	"0.0183618795881054"	"15"	"0.0002277"	"0.001133"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGEYGLR"	"[K].lIGEYGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"575.34381"	"1149.68035"	"1149.68292"	"-2.24"	"-0.00129"	"6/56"	"6"	"56"	"3872810.80053711"	"HCD"	"MS2"	"0"	"254.7"	"100.000"	"43.3920"	"12151"	"12151"	"12127"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.2"	""	"336.7"	""	"369.2"	""	"392.7"	"7.3"	"517.7"	"470.8"	""	"481"	"30"	"33.000"	"26.000"	"0.0225483662665674"	"15"	"0.0003839"	"0.001595"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGASEK"	"[R].iSGASEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"575.34692"	"1149.68657"	"1149.68796"	"-1.21"	"-0.00069"	"6/56"	"6"	"56"	"613812.610595703"	"HCD"	"MS2"	"35.38067"	"65.5"	"100.000"	"27.3655"	"5691"	"5691"	"5666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.0"	""	"80.1"	""	"96.0"	""	"96.1"	"0.8"	"121.3"	"143.5"	""	"393"	"18"	"32.000"	"25.000"	"0.309287632867612"	"23"	"0.0001889"	"0.001065"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGASEK"	"[R].iSGASEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"575.34717"	"1149.68706"	"1149.68796"	"-0.78"	"-0.00045"	"6/56"	"6"	"56"	"843459.403503418"	"HCD"	"MS2"	"30.84999"	"88.1"	"100.000"	"27.2725"	"5618"	"5618"	"5597"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.4"	""	"104.9"	""	"127.1"	""	"128.9"	"0.8"	"162.0"	"192.8"	""	"393"	"15"	"32.000"	"25.000"	"0.675091367623253"	"19"	"0.0003839"	"0.001565"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FITILGTR"	"[K].fITILGTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.36322"	"1149.71916"	"1149.71931"	"-0.13"	"-0.00007"	"6/64"	"6"	"64"	"88976871.895752"	"HCD"	"MS2"	"1.757485"	"723.6"	"19.617"	"55.6325"	"17174"	"17174"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"922.5"	""	"986.7"	""	"1109.4"	""	"1275.7"	"1.6"	"1174.9"	"1379.2"	""	"164"	"32"	"29.000"	"22.000"	"0.00509112608068652"	"15"	"0.00109"	"0.01467"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FITILGTR"	"[K].fITILGTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"575.36322"	"1149.71916"	"1149.71931"	"-0.13"	"-0.00007"	"6/64"	"6"	"64"	"70297729.0500488"	"HCD"	"MS2"	"2.914724"	"871.2"	"28.689"	"55.4311"	"17037"	"17037"	"17019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1102.8"	""	"1177.3"	""	"1346.9"	""	"1584.4"	""	"1432.7"	"1606.5"	""	"164"	"34"	"29.000"	"22.000"	"0.00302561630827523"	"16"	"0.00103"	"0.01293"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FITILGTR"	"[K].fITILGTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"575.36328"	"1149.71929"	"1149.71931"	"-0.02"	"-0.00001"	"6/64"	"6"	"64"	"27262554.0789795"	"HCD"	"MS2"	"1.479674"	"428.4"	"36.215"	"55.9456"	"17302"	"17302"	"17285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"519.1"	""	"568.3"	""	"659.3"	""	"732.2"	""	"730.6"	"853.6"	""	"162"	"32"	"29.000"	"22.000"	"0.00508727270638788"	"16"	"0.0009404"	"0.01008"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FITILGTR"	"[K].fITILGTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.36340"	"1149.71953"	"1149.71931"	"0.19"	"0.00011"	"6/64"	"6"	"64"	"32514021.7110596"	"HCD"	"MS2"	"0.5511305"	"428.1"	"30.471"	"55.7393"	"17164"	"17164"	"17147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"549.8"	""	"553.3"	""	"650.0"	""	"766.4"	"3.4"	"709.4"	"821.2"	""	"160"	"34"	"29.000"	"22.000"	"0.00302754067773675"	"15"	"0.0007076"	"0.006848"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIFTQGR"	"[R].tVIFTQGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"575.84198"	"1150.67668"	"1150.67817"	"-1.30"	"-0.00075"	"7/68"	"7"	"68"	"9206621.48913574"	"HCD"	"MS2"	"7.377797"	"530.5"	"100.000"	"35.1940"	"8805"	"8805"	"8779"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"817.8"	""	"812.5"	""	"872.2"	""	"769.5"	"0.3"	"842.0"	"900.6"	""	"457"	"23"	"33.000"	"26.000"	"0.127024122786287"	"22"	"0.0006037"	"0.004371"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLLFGQR"	"[K].sTLLFGQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"575.84210"	"1150.67693"	"1150.67817"	"-1.08"	"-0.00062"	"6/60"	"6"	"60"	"5032616.57318115"	"HCD"	"MS2"	"42.65841"	"294.6"	"74.982"	"39.7006"	"10655"	"10655"	"10630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"369.4"	""	"398.3"	""	"367.7"	""	"561.5"	"0.0"	"564.0"	"532.2"	""	"457"	"10"	"33.000"	"26.000"	"2.34361465148447"	"17"	"0.0004166"	"0.002187"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGAFGGK"	"[R].vGGAFGGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z0U5"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"Q9Z0U5"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.85156"	"1150.69585"	"1150.69846"	"-2.27"	"-0.00131"	"7/58"	"7"	"58"	"8017086.55065918"	"HCD"	"MS2"	"12.12619"	"639.8"	"100.000"	"34.1572"	"8380"	"8380"	"8361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"923.6"	""	"884.1"	""	"944.9"	""	"995.8"	""	"1116.7"	"1195.5"	""	"364"	"28"	"32.000"	"25.000"	"0.0309080344748037"	"14"	"0.0003146"	"0.001404"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGAFGGK"	"[R].vGGAFGGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z0U5"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"Q9Z0U5"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.85223"	"1150.69719"	"1150.69846"	"-1.11"	"-0.00064"	"12/58"	"12"	"58"	"8569349.20550537"	"HCD"	"MS2"	"0"	"674.3"	"100.000"	"34.2351"	"8455"	"8455"	"8436"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"959.9"	""	"953.9"	""	"1000.4"	""	"1026.0"	""	"1188.0"	"1266.2"	""	"368"	"26"	"32.000"	"25.000"	"0.0439357276056025"	"14"	"0.0004166"	"0.00213"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPNWHR"	"[K].nVPNWHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"384.54700"	"1151.62644"	"1151.62714"	"-0.61"	"-0.00023"	"6/62"	"6"	"62"	"1528881.61383057"	"HCD"	"MS2"	"50.32705"	"108.2"	"100.000"	"27.2062"	"5591"	"5591"	"5575"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.1"	""	"152.8"	""	"166.5"	""	"178.2"	"1.7"	"179.2"	"175.7"	""	"690"	"10"	"35.000"	"28.000"	"3.14643739577789"	"17"	"0.001718"	"0.02352"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPNWHR"	"[K].nVPNWHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.1818"	"0.0000"	"1"	"1"	"1"	"384.54703"	"1151.62653"	"1151.62714"	"-0.53"	"-0.00020"	"7/62"	"7"	"62"	"1440966.3538208"	"HCD"	"MS2"	"39.89024"	"104.6"	"100.000"	"27.2850"	"5658"	"5658"	"5643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.5"	""	"136.8"	""	"155.3"	""	"165.5"	""	"185.4"	"185.9"	""	"690"	"11"	"35.000"	"28.000"	"2.6535000189888"	"22"	"0.00162"	"0.02259"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFLQDPR"	"[R].fFLQDPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"576.32379"	"1151.64031"	"1151.64106"	"-0.65"	"-0.00038"	"5/54"	"5"	"54"	"8683194.88275146"	"HCD"	"MS2"	"29.43723"	"438.0"	"100.000"	"46.8496"	"13606"	"13606"	"13586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"580.0"	""	"544.1"	""	"570.3"	""	"800.2"	""	"853.2"	"805.5"	""	"728"	"37"	"35.000"	"28.000"	"0.00729627817960919"	""	"0.009861"	"0.4465"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFLQDPR"	"[R].fFLQDPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"576.32434"	"1151.64141"	"1151.64106"	"0.30"	"0.00017"	"5/54"	"5"	"54"	"7990978.84997559"	"HCD"	"MS2"	"52.1826"	"394.9"	"100.000"	"46.5920"	"13453"	"13453"	"13432"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"514.5"	""	"509.3"	""	"500.3"	""	"736.7"	"4.5"	"749.1"	"730.1"	""	"685"	"34"	"35.000"	"28.000"	"0.012492822682202"	"27"	"0.004377"	"0.1283"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFNLYPR"	"[K].iFNLYPR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62950; Q62952"	"Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"576.34149"	"1151.67571"	"1151.67745"	"-1.51"	"-0.00087"	"5/58"	"5"	"58"	"9592506.08581543"	"HCD"	"MS2"	"8.066509"	"426.2"	"100.000"	"52.3955"	"15867"	"15867"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"601.4"	""	"662.0"	""	"640.4"	""	"634.3"	""	"710.0"	"791.3"	""	"410"	"27"	"33.000"	"26.000"	"0.0417593625929673"	"18"	"0.001058"	"0.01442"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFTWLVR"	"[R].tFTWLVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"576.34161"	"1151.67595"	"1151.67745"	"-1.30"	"-0.00075"	"6/52"	"6"	"52"	"6745628.78491211"	"HCD"	"MS2"	"29.68051"	"344.8"	"100.000"	"54.9209"	"16829"	"16829"	"16812"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"342.8"	""	"853.8"	""	"447.3"	""	"403.7"	""	"572.7"	"649.0"	""	"410"	"20"	"33.000"	"26.000"	"0.227905004092726"	"17"	"0.0008731"	"0.008598"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFNLYPR"	"[K].iFNLYPR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62950; Q62952"	"Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"576.34204"	"1151.67681"	"1151.67745"	"-0.56"	"-0.00032"	"5/58"	"5"	"58"	"8685537.70300293"	"HCD"	"MS2"	"17.20988"	"394.2"	"100.000"	"52.1930"	"15734"	"15734"	"15714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"538.1"	""	"589.2"	""	"604.6"	""	"594.1"	"1.4"	"680.9"	"723.9"	""	"382"	"27"	"32.000"	"25.000"	"0.0383736727208267"	"19"	"0.00103"	"0.01268"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFNLYPR"	"[K].iFNLYPR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62950; Q62952"	"Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"576.34216"	"1151.67705"	"1151.67745"	"-0.34"	"-0.00020"	"5/58"	"5"	"58"	"3922048.70727539"	"HCD"	"MS2"	"25.33442"	"205.9"	"100.000"	"52.7063"	"15994"	"15994"	"15974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.4"	""	"289.6"	""	"350.1"	""	"344.3"	""	"334.6"	"334.5"	""	"381"	"27"	"32.000"	"25.000"	"0.0383614469598785"	"18"	"0.001058"	"0.0144"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFTWLVR"	"[R].tFTWLVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"576.34247"	"1151.67766"	"1151.67745"	"0.19"	"0.00011"	"5/52"	"5"	"52"	"9247205.66693115"	"HCD"	"MS2"	"34.35493"	"422.7"	"100.000"	"55.1313"	"16968"	"16968"	"16949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"456.6"	""	"924.9"	""	"574.5"	""	"519.5"	"3.0"	"673.6"	"851.0"	""	"373"	"29"	"32.000"	"25.000"	"0.0213146809438293"	"18"	"0.0006737"	"0.006733"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFNLYPR"	"[K].iFNLYPR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62950; Q62952"	"Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"576.34283"	"1151.67839"	"1151.67745"	"0.82"	"0.00047"	"5/58"	"5"	"58"	"3782268.78076172"	"HCD"	"MS2"	"26.0143"	"202.0"	"100.000"	"52.5148"	"15866"	"15866"	"15842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.1"	""	"288.6"	""	"337.5"	""	"337.1"	""	"332.5"	"313.6"	""	"384"	"25"	"32.000"	"25.000"	"0.0553734048600308"	"19"	"0.0009727"	"0.01048"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MASVTGK"	"[K].mASVTGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.34583"	"1151.68437"	"1151.68585"	"-1.28"	"-0.00074"	"6/52"	"6"	"52"	"3700829.12036133"	"HCD"	"MS2"	"6.327903"	"384.9"	"100.000"	"31.5554"	"7326"	"7326"	"7302"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"547.4"	""	"514.7"	""	"595.8"	""	"529.0"	"9.1"	"727.4"	"723.6"	""	"352"	"22"	"32.000"	"25.000"	"0.121762250881733"	"14"	"0.0008731"	"0.009136"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAAMGK"	"[K].vTAAmGk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"576.34613"	"1151.68498"	"1151.68585"	"-0.75"	"-0.00043"	"6/48"	"6"	"48"	"751930.36328125"	"HCD"	"MS2"	"0"	"65.6"	"100.000"	"26.3102"	"5266"	"5266"	"5243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.4"	""	"82.6"	""	"86.7"	""	"125.4"	""	"115.3"	"129.0"	""	"352"	"19"	"32.000"	"25.000"	"0.242947630570108"	"15"	"0.006001"	"0.2085"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSGTSIK"	"[K].tSGTSIk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"3"	"576.35645"	"1151.70561"	"1151.70361"	"1.74"	"0.00100"	"10/56"	"10"	"56"	"1645029.4621582"	"HCD"	"MS2"	"28.87789"	"130.3"	"100.000"	"26.4310"	"5279"	"5279"	"5249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.8"	""	"176.4"	""	"194.2"	""	"214.9"	"1.2"	"243.1"	"260.0"	""	"176"	"9"	"29.000"	"22.000"	"0.994220404912062"	"15"	"0.001846"	"0.02622"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSGTSIK"	"[K].tSGTSIk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"576.35651"	"1151.70574"	"1151.70361"	"1.85"	"0.00106"	"10/56"	"10"	"56"	"990272.893310547"	"HCD"	"MS2"	"18.79492"	"84.4"	"100.000"	"26.5467"	"5363"	"5363"	"5333"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.1"	""	"115.0"	""	"120.2"	""	"134.1"	""	"154.2"	"176.6"	""	"176"	"8"	"29.000"	"22.000"	"1.42063553000731"	"13"	"0.001007"	"0.01102"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALHSLLLR"	"[R].aLHSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35263"	"Platelet-activating factor acetylhydrolase IB subunit gamma OS=Rattus norvegicus OX=10116 GN=Pafah1b3 PE=2 SV=1"	"O35263"	"Platelet-activating factor acetylhydrolase IB subunit gamma OS=Rattus norvegicus OX=10116 GN=Pafah1b3 PE=2 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"384.58646"	"1151.74482"	"1151.74619"	"-1.20"	"-0.00046"	"5/56"	"5"	"56"	"3628274.04168701"	"HCD"	"MS2"	"0"	"79.4"	"100.000"	"36.7526"	"9488"	"9488"	"9462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.6"	"3.3"	"100.1"	""	"183.3"	""	"106.7"	""	"124.3"	"130.9"	""	"40"	"27"	"23.000"	"16.000"	"0.00428578120224012"	""	"0.0004166"	"0.002423"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALHSLLLR"	"[R].aLHSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35263"	"Platelet-activating factor acetylhydrolase IB subunit gamma OS=Rattus norvegicus OX=10116 GN=Pafah1b3 PE=2 SV=1"	"O35263"	"Platelet-activating factor acetylhydrolase IB subunit gamma OS=Rattus norvegicus OX=10116 GN=Pafah1b3 PE=2 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"384.58667"	"1151.74546"	"1151.74619"	"-0.64"	"-0.00025"	"5/56"	"5"	"56"	"4487923.16156006"	"HCD"	"MS2"	"6.901217"	"87.0"	"100.000"	"36.6384"	"9398"	"9398"	"9370"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.3"	"5.3"	"118.9"	""	"179.8"	""	"113.7"	"1.3"	"145.6"	"144.8"	""	"40"	"32"	"23.000"	"16.000"	"0.00119132428705802"	""	"0.0003839"	"0.001859"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIHPASGR"	"[R].wIHPASGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"384.88736"	"1152.64753"	"1152.64754"	"-0.01"	"-0.00001"	"4/56"	"4"	"56"	"939480.867919922"	"HCD"	"MS2"	"61.48729"	"58.9"	"100.000"	"27.3644"	"5656"	"5656"	"5629"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.3"	""	"86.5"	""	"105.3"	""	"88.5"	"0.1"	"105.9"	"89.3"	""	"508"	"4"	"34.000"	"27.000"	"10.8101996935971"	"13"	"0.003788"	"0.08919"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPFFSAR"	"[R].sLPFFSAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2KMM2"	"Trafficking protein particle complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Trappc1 PE=2 SV=1"	"Q2KMM2"	"Trafficking protein particle complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Trappc1 PE=2 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"577.33154"	"1153.65581"	"1153.65671"	"-0.78"	"-0.00045"	"4/66"	"4"	"66"	"5148338.58642578"	"HCD"	"MS2"	"39.51247"	"285.8"	"100.000"	"50.9933"	"15244"	"15244"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"382.3"	""	"367.8"	""	"387.1"	""	"496.4"	"3.2"	"549.0"	"523.4"	""	"426"	"17"	"33.000"	"26.000"	"0.427936769085659"	"21"	"0.000523"	"0.002905"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSQPQPGR"	"[K].gVSQPQPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"577.82697"	"1154.64665"	"1154.64794"	"-1.11"	"-0.00064"	"6/74"	"6"	"74"	"378768.947143555"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"22.3490"	"3649"	"3649"	"3637"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.4"	""	"31.1"	""	"29.5"	""	"36.9"	""	"38.0"	"39.8"	""	"452"	"17"	"33.000"	"26.000"	"0.467851944826775"	"16"	"0.005478"	"0.1753"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSQPQPGR"	"[K].gVSQPQPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.82709"	"1154.64690"	"1154.64794"	"-0.90"	"-0.00052"	"6/74"	"6"	"74"	"403106.429870605"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"22.3953"	"3700"	"3700"	"3686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.2"	""	"30.9"	""	"31.8"	""	"42.9"	""	"42.3"	"43.0"	""	"445"	"29"	"33.000"	"26.000"	"0.0271850424386684"	"14"	"0.0004557"	"0.002565"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"577.84094"	"1154.67461"	"1154.67309"	"1.32"	"0.00076"	"7/74"	"7"	"74"	"21991799.9143677"	"HCD"	"MS2"	"16.14384"	"1320.0"	"100.000"	"31.1190"	"7147"	"7147"	"7126"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1503.4"	""	"1487.1"	""	"1619.2"	""	"2328.8"	""	"2765.6"	"2848.7"	""	"367"	"30"	"32.000"	"25.000"	"0.0191706160227017"	"17"	"0.0007793"	"0.007329"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"577.84180"	"1154.67632"	"1154.67309"	"2.80"	"0.00161"	"7/74"	"7"	"74"	"25914614.7293701"	"HCD"	"MS2"	"8.543691"	"1000.4"	"65.137"	"31.2314"	"7235"	"7235"	"7216"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1171.5"	""	"1095.6"	""	"1214.1"	""	"1761.2"	"0.2"	"2073.5"	"2188.7"	""	"350"	"30"	"32.000"	"25.000"	"0.0187515878416581"	"18"	"0.001058"	"0.01385"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTWGPLR"	"[R].vPTWGPLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"577.84723"	"1154.68718"	"1154.68834"	"-1.01"	"-0.00058"	"10/56"	"10"	"56"	"3398361.56262207"	"HCD"	"MS2"	"0"	"194.9"	"100.000"	"46.3623"	"13359"	"13359"	"13336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.0"	""	"292.0"	""	"309.1"	""	"288.0"	""	"354.7"	"330.5"	""	"289"	"7"	"31.000"	"24.000"	"3.0469676766536"	"15"	"0.001058"	"0.0137"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWVSK"	"[-].mFSWVSk.[D]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"578.30670"	"1155.60613"	"1155.60698"	"-0.74"	"-0.00043"	"5/54"	"5"	"54"	"1378314.09814453"	"HCD"	"MS2"	"8.430847"	"50.3"	"100.000"	"78.2962"	"26401"	"26401"	"26383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.3"	""	"74.1"	""	"78.4"	""	"54.0"	""	"92.2"	"103.0"	""	"424"	"35"	"33.000"	"26.000"	"0.00748748319958948"	"25"	"0.002651"	"0.03922"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWVSK"	"[-].mFSWVSk.[D]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"578.30676"	"1155.60625"	"1155.60698"	"-0.64"	"-0.00037"	"5/54"	"5"	"54"	"1357429.45880127"	"HCD"	"MS2"	"29.52848"	"52.0"	"100.000"	"77.7104"	"26111"	"26111"	"26089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.1"	""	"73.5"	""	"81.5"	""	"66.3"	""	"89.6"	"100.6"	""	"424"	"14"	"33.000"	"26.000"	"0.940450325134637"	"21"	"0.002953"	"0.05279"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWVSK"	"[-].mFSWVSk.[D]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"578.30676"	"1155.60625"	"1155.60698"	"-0.64"	"-0.00037"	"6/54"	"6"	"54"	"19244817.7541504"	"HCD"	"MS2"	"0.5182983"	"241.7"	"44.171"	"77.9781"	"26272"	"26272"	"26257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.1"	""	"339.3"	""	"406.2"	""	"247.5"	""	"423.1"	"475.1"	""	"424"	"44"	"33.000"	"26.000"	"0.000902268635843535"	"24"	"0.008433"	"0.3568"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWVSK"	"[-].mFSWVSk.[D]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"578.30695"	"1155.60661"	"1155.60698"	"-0.32"	"-0.00018"	"6/54"	"6"	"54"	"16903896.7539063"	"HCD"	"MS2"	"0.368269"	"271.1"	"55.411"	"77.9908"	"26226"	"26226"	"26215"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"436.7"	""	"376.2"	""	"453.4"	""	"264.7"	""	"500.9"	"542.0"	""	"423"	"47"	"33.000"	"26.000"	"0.000440869821775076"	"25"	"0.002393"	"0.03528"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWVSK"	"[-].mFSWVSk.[D]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"578.30701"	"1155.60674"	"1155.60698"	"-0.21"	"-0.00012"	"5/54"	"5"	"54"	"1335078.94024658"	"HCD"	"MS2"	"8.896764"	"52.3"	"100.000"	"78.3134"	"26357"	"26357"	"26337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.3"	""	"70.8"	""	"80.3"	""	"62.1"	"0.7"	"98.6"	"104.5"	""	"423"	"32"	"33.000"	"26.000"	"0.0142991549295404"	"24"	"0.001587"	"0.02158"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWVSK"	"[-].mFSWVSk.[D]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"578.30713"	"1155.60698"	"1155.60698"	"0.00"	"0.00000"	"5/54"	"5"	"54"	"1744723.31280518"	"HCD"	"MS2"	"33.01616"	"61.0"	"100.000"	"77.7000"	"26158"	"26158"	"26133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.3"	""	"82.5"	""	"95.1"	""	"83.3"	"1.8"	"98.6"	"120.9"	""	"423"	"32"	"33.000"	"26.000"	"0.0141029631688681"	"24"	"0.002981"	"0.05702"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYLTIFR"	"[R].nYLTIFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"578.33960"	"1155.67192"	"1155.67236"	"-0.38"	"-0.00022"	"5/60"	"5"	"60"	"4400554.23675537"	"HCD"	"MS2"	"13.50608"	"239.4"	"100.000"	"51.3524"	"15391"	"15391"	"15362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.0"	""	"349.1"	""	"361.7"	""	"379.9"	""	"412.7"	"399.2"	""	"329"	"29"	"32.000"	"25.000"	"0.0188436878867791"	"18"	"0.0008731"	"0.009394"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYLTIFR"	"[R].nYLTIFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"578.33966"	"1155.67204"	"1155.67236"	"-0.27"	"-0.00016"	"5/60"	"5"	"60"	"5903611.41040039"	"HCD"	"MS2"	"15.05859"	"309.1"	"100.000"	"51.5822"	"15535"	"15535"	"15510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"498.2"	""	"451.0"	""	"468.7"	""	"495.5"	""	"493.9"	"514.4"	""	"328"	"26"	"32.000"	"25.000"	"0.0387118430241615"	"22"	"0.0007076"	"0.007158"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPTPGK"	"[K].vVPTPGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"578.37769"	"1155.74809"	"1155.75017"	"-1.79"	"-0.00104"	"6/48"	"6"	"48"	"1030696.16973877"	"HCD"	"MS2"	"0"	"108.9"	"100.000"	"33.3172"	"8045"	"8045"	"8028"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.0"	""	"125.6"	""	"129.2"	""	"171.4"	"1.3"	"234.2"	"189.8"	""	"123"	"28"	"27.000"	"20.000"	"0.00954718011124221"	""	"0.003286"	"0.0686"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVPLAK"	"[K].gIVPLAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"578.39606"	"1155.78484"	"1155.78655"	"-1.48"	"-0.00086"	"6/50"	"6"	"50"	"33053425.3127441"	"HCD"	"MS2"	"0"	"438.1"	"21.453"	"41.1372"	"11240"	"11240"	"11221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"571.5"	""	"563.1"	""	"608.9"	""	"737.4"	""	"809.2"	"863.9"	""	"90"	"40"	"26.000"	"19.000"	"0.000501432540116278"	""	"0.001587"	"0.02127"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVPLAK"	"[K].gIVPLAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"578.39716"	"1155.78703"	"1155.78655"	"0.42"	"0.00024"	"6/50"	"6"	"50"	"63805578.3413086"	"HCD"	"MS2"	"6.433984"	"685.1"	"18.932"	"41.1211"	"11278"	"11278"	"11261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"991.5"	""	"926.0"	""	"963.7"	""	"1204.8"	"2.8"	"1170.3"	"1226.1"	""	"86"	"40"	"26.000"	"19.000"	"0.000473661903102809"	""	"0.002651"	"0.0398"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWANFAR"	"[K].yWANFAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"578.80762"	"1156.60796"	"1156.61009"	"-1.85"	"-0.00107"	"6/56"	"6"	"56"	"52596957.875"	"HCD"	"MS2"	"24.65938"	"631.4"	"23.394"	"43.1774"	"12117"	"12117"	"12105"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"845.9"	""	"914.3"	""	"1012.3"	""	"1066.7"	""	"989.0"	"1146.6"	""	"372"	"11"	"32.000"	"25.000"	"1.54708061425097"	"18"	"0.006061"	"0.2149"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWANFAR"	"[K].yWANFAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"578.80768"	"1156.60808"	"1156.61009"	"-1.74"	"-0.00101"	"6/56"	"6"	"56"	"27187125.0478516"	"HCD"	"MS2"	"0"	"409.1"	"27.860"	"43.4499"	"12224"	"12224"	"12211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"533.1"	""	"569.5"	""	"656.2"	""	"698.6"	""	"647.9"	"767.8"	""	"375"	"14"	"32.000"	"25.000"	"0.810963433190641"	"21"	"0.006092"	"0.2187"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWANFAR"	"[K].yWANFAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"578.80780"	"1156.60832"	"1156.61009"	"-1.53"	"-0.00089"	"6/56"	"6"	"56"	"45953262.949707"	"HCD"	"MS2"	"35.63504"	"628.2"	"24.272"	"42.9303"	"11970"	"11970"	"11956"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"884.4"	""	"873.3"	""	"998.8"	""	"1062.9"	"0.8"	"987.5"	"1134.7"	""	"384"	"11"	"32.000"	"25.000"	"1.63795221891377"	"17"	"0.006092"	"0.2191"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWANFAR"	"[K].yWANFAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"578.80798"	"1156.60869"	"1156.61009"	"-1.21"	"-0.00070"	"6/56"	"6"	"56"	"32736114.6486816"	"HCD"	"MS2"	"4.481718"	"423.4"	"22.707"	"43.2088"	"12077"	"12077"	"12064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"581.1"	""	"570.2"	""	"680.9"	""	"695.2"	""	"681.7"	"801.2"	""	"379"	"14"	"32.000"	"25.000"	"0.804654073678263"	"21"	"0.005792"	"0.1875"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFDLMR"	"[K].vFFDLMR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P36860"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1"	"P36860; P63322"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1; Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.82208"	"1156.63689"	"1156.63862"	"-1.49"	"-0.00086"	"9/48"	"9"	"48"	"9438891.31396484"	"HCD"	"MS2"	"0"	"455.7"	"100.000"	"67.2524"	"21907"	"21907"	"21896"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"514.7"	""	"660.7"	""	"632.8"	""	"582.0"	"8.2"	"935.9"	"993.4"	""	"453"	"26"	"33.000"	"26.000"	"0.0540839255579835"	"14"	"0.001125"	"0.01516"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFDLMR"	"[K].vFFDLMR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P36860"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1"	"P36860; P63322"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1; Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"578.82220"	"1156.63713"	"1156.63862"	"-1.28"	"-0.00074"	"5/48"	"5"	"48"	"3760197.44451904"	"HCD"	"MS2"	"0"	"188.2"	"100.000"	"67.6074"	"22000"	"22000"	"21985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.8"	""	"275.2"	""	"246.6"	""	"248.0"	""	"386.4"	"409.8"	""	"453"	"21"	"33.000"	"26.000"	"0.187097595579231"	"18"	"0.0009404"	"0.009757"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFDLMR"	"[K].vFFDLMR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P36860"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1"	"P36860; P63322"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1; Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"578.82239"	"1156.63750"	"1156.63862"	"-0.97"	"-0.00056"	"5/48"	"5"	"48"	"3464123.16107178"	"HCD"	"MS2"	"8.644113"	"166.0"	"100.000"	"67.5567"	"22029"	"22029"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.2"	""	"242.7"	""	"222.2"	""	"203.8"	"1.0"	"346.6"	"352.5"	""	"444"	"20"	"33.000"	"26.000"	"0.226127288148014"	"20"	"0.0009404"	"0.009924"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFDLMR"	"[K].vFFDLMR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P36860"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1"	"P36860; P63322"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1; Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.82239"	"1156.63750"	"1156.63862"	"-0.97"	"-0.00056"	"9/48"	"9"	"48"	"9779378.9319458"	"HCD"	"MS2"	"0"	"465.6"	"100.000"	"67.3221"	"21887"	"21887"	"21877"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"534.7"	""	"680.5"	""	"634.4"	""	"599.6"	"3.0"	"953.9"	"1015.1"	""	"444"	"26"	"33.000"	"26.000"	"0.0531316097921996"	"14"	"0.0009727"	"0.01074"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGHLLQR"	"[R].gFGHLLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"386.23044"	"1156.67676"	"1156.67884"	"-1.80"	"-0.00069"	"6/60"	"6"	"60"	"29958635.8981934"	"HCD"	"MS2"	"53.26884"	"316.3"	"21.449"	"33.2022"	"8043"	"8043"	"8033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.7"	""	"455.8"	""	"376.0"	""	"627.0"	"8.9"	"628.1"	"554.1"	""	"399"	"18"	"32.000"	"26.000"	"0.32579386360492"	"17"	"0.00103"	"0.01125"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALSVGYR"	"[K].yALSVGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.32849"	"1157.64971"	"1157.65162"	"-1.66"	"-0.00096"	"7/56"	"7"	"56"	"3724933.97741699"	"HCD"	"MS2"	"23.13227"	"227.8"	"100.000"	"37.8375"	"9890"	"9890"	"9863"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.6"	""	"294.0"	""	"311.8"	""	"359.0"	"3.9"	"390.7"	"463.8"	""	"562"	"7"	"34.000"	"27.000"	"5.50435353255183"	"13"	"0.00103"	"0.01199"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALSVGYR"	"[K].yALSVGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.32867"	"1157.65007"	"1157.65162"	"-1.34"	"-0.00078"	"5/56"	"5"	"56"	"4714953.24249268"	"HCD"	"MS2"	"0"	"292.8"	"100.000"	"37.8734"	"9948"	"9948"	"9921"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"439.8"	""	"375.4"	""	"421.7"	""	"454.9"	"3.2"	"495.9"	"581.8"	""	"562"	"26"	"34.000"	"27.000"	"0.0704216700102023"	"14"	"0.0003839"	"0.001862"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVAVVK"	"[R].iAVAVVk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62862"	"Dual specificity mitogen-activated protein kinase kinase 5 OS=Rattus norvegicus OX=10116 GN=Map2k5 PE=1 SV=1"	"Q62862"	"Dual specificity mitogen-activated protein kinase kinase 5 OS=Rattus norvegicus OX=10116 GN=Map2k5 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"579.40417"	"1157.80107"	"1157.80220"	"-0.97"	"-0.00056"	"6/50"	"6"	"50"	"15444363.9165039"	"HCD"	"MS2"	"0"	"899.5"	"100.000"	"41.6092"	"11477"	"11477"	"11461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"957.7"	""	"1019.2"	""	"1095.0"	""	"1245.1"	""	"1917.9"	"2325.0"	""	"26"	"38"	"21.000"	"14.000"	"0.000226956879879666"	""	"0.001058"	"0.01316"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVAVVK"	"[R].iAVAVVk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62862"	"Dual specificity mitogen-activated protein kinase kinase 5 OS=Rattus norvegicus OX=10116 GN=Map2k5 PE=1 SV=1"	"Q62862"	"Dual specificity mitogen-activated protein kinase kinase 5 OS=Rattus norvegicus OX=10116 GN=Map2k5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.40424"	"1157.80120"	"1157.80220"	"-0.87"	"-0.00050"	"9/50"	"9"	"50"	"11276041.6837158"	"HCD"	"MS2"	"78.75935"	"758.2"	"67.290"	"41.4418"	"11365"	"11365"	"11341"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"801.8"	""	"855.6"	""	"956.2"	""	"1096.5"	""	"1619.3"	"1894.6"	""	"26"	"9"	"21.000"	"14.000"	"0.183207543794844"	"13"	"0.006001"	"0.2039"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVAVVK"	"[R].iAVAVVk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62862"	"Dual specificity mitogen-activated protein kinase kinase 5 OS=Rattus norvegicus OX=10116 GN=Map2k5 PE=1 SV=1"	"Q62862"	"Dual specificity mitogen-activated protein kinase kinase 5 OS=Rattus norvegicus OX=10116 GN=Map2k5 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"579.40424"	"1157.80120"	"1157.80220"	"-0.87"	"-0.00050"	"6/50"	"6"	"50"	"17991006.6798706"	"HCD"	"MS2"	"4.476282"	"758.2"	"89.490"	"41.4372"	"11363"	"11363"	"11341"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"801.8"	""	"855.6"	""	"956.2"	""	"1096.5"	""	"1619.3"	"1894.6"	""	"26"	"35"	"21.000"	"14.000"	"0.000460196543408465"	""	"0.001217"	"0.01797"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVLIGK"	"[K].iGVLIGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1L0"	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Pik3cb PE=2 SV=1"	"Q9Z1L0"	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Pik3cb PE=2 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"3"	"579.40436"	"1157.80144"	"1157.80220"	"-0.66"	"-0.00038"	"6/50"	"6"	"50"	"2042320.93487549"	"HCD"	"MS2"	"0"	"133.7"	"100.000"	"50.5749"	"15073"	"15073"	"15042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.9"	""	"185.4"	""	"184.9"	""	"211.4"	""	"262.6"	"243.1"	""	"26"	"12"	"21.000"	"14.000"	"0.0870849992241485"	""	"0.0008125"	"0.007694"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSLIGK"	"[R].aLSLIGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"580.39374"	"1159.78020"	"1159.78147"	"-1.09"	"-0.00063"	"6/48"	"6"	"48"	"5096976.13336182"	"HCD"	"MS2"	"26.02277"	"368.9"	"100.000"	"46.1221"	"13309"	"13309"	"13284"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"448.6"	""	"478.2"	""	"508.4"	""	"668.0"	"0.4"	"719.0"	"675.3"	""	"84"	"31"	"26.000"	"19.000"	"0.00298022662544623"	""	"0.001058"	"0.01399"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSLIGK"	"[R].aLSLIGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"580.39417"	"1159.78105"	"1159.78147"	"-0.36"	"-0.00021"	"6/48"	"6"	"48"	"4988319.0098877"	"HCD"	"MS2"	"40.54789"	"351.2"	"100.000"	"45.8808"	"13162"	"13162"	"13133"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"445.5"	""	"434.7"	""	"500.2"	""	"639.0"	"0.1"	"665.5"	"643.5"	""	"84"	"31"	"26.000"	"19.000"	"0.00309919776654222"	""	"0.0006037"	"0.004432"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANSWWLR"	"[K].aNSWWLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"581.32117"	"1161.63506"	"1161.63664"	"-1.37"	"-0.00079"	"5/58"	"5"	"58"	"9804718.91143799"	"HCD"	"MS2"	"0"	"369.2"	"71.900"	"45.6274"	"13112"	"13112"	"13095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"612.5"	""	"506.4"	""	"564.6"	""	"544.4"	"23.4"	"600.3"	"640.4"	""	"912"	"18"	"36.000"	"29.000"	"0.69018392928691"	"19"	"0.001846"	"0.02535"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANSWWLR"	"[K].aNSWWLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"581.32141"	"1161.63555"	"1161.63664"	"-0.95"	"-0.00055"	"5/58"	"5"	"58"	"10860182.8137207"	"HCD"	"MS2"	"4.605383"	"551.7"	"100.000"	"45.3700"	"12957"	"12957"	"12944"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"909.2"	""	"794.4"	""	"834.6"	""	"797.7"	"28.1"	"929.4"	"924.5"	""	"907"	"18"	"36.000"	"29.000"	"0.649497212320552"	"17"	"0.001587"	"0.02187"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQPGSQR"	"[K].fLQPGSQR.[KQ]"	"N-Term(TMT6plex)"	"2"	"6"	"P14942; P04904"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2;Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; Q6AXY0; P14942; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"581.33185"	"1161.65642"	"1161.65777"	"-1.16"	"-0.00068"	"5/66"	"5"	"66"	"7952084.34606934"	"HCD"	"MS2"	"19.62865"	"356.6"	"100.000"	"31.9087"	"7471"	"7471"	"7444"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"499.1"	""	"428.4"	""	"493.4"	""	"632.5"	""	"614.9"	"714.6"	""	"777"	"24"	"35.000"	"28.000"	"0.17313745250243"	"24"	"0.0004557"	"0.002607"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQPGSQR"	"[K].fLQPGSQR.[KQ]"	"N-Term(TMT6plex)"	"2"	"6"	"P14942; P04904"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2;Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; Q6AXY0; P14942; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"581.33203"	"1161.65679"	"1161.65777"	"-0.85"	"-0.00049"	"5/66"	"5"	"66"	"10781677.237793"	"HCD"	"MS2"	"0"	"451.0"	"100.000"	"32.0525"	"7572"	"7572"	"7546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"636.9"	""	"561.3"	""	"626.1"	""	"779.7"	""	"782.9"	"886.7"	""	"773"	"24"	"35.000"	"28.000"	"0.16563400313361"	"24"	"0.0004166"	"0.002187"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLQSSASR"	"[K].aLLQSSASR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.34186"	"1161.67644"	"1161.67890"	"-2.12"	"-0.00123"	"8/80"	"8"	"80"	"1226733.94921875"	"HCD"	"MS2"	"100"	"108.2"	"100.000"	"28.9625"	"6271"	"6271"	"6259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.4"	""	"129.9"	""	"141.6"	""	"189.9"	""	"212.2"	"207.4"	""	"673"	"24"	"35.000"	"28.000"	"0.136453622178381"	"14"	"0"	"0.0001718"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THFGGGK"	"[R].tHFGGGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.34204"	"1161.67681"	"1161.67806"	"-1.08"	"-0.00063"	"6/48"	"6"	"48"	"1450631.12420654"	"HCD"	"MS2"	"45.69047"	"112.9"	"100.000"	"24.0338"	"4305"	"4305"	"4279"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.2"	""	"169.1"	""	"178.5"	""	"181.5"	"6.4"	"200.0"	"163.2"	""	"673"	"19"	"35.000"	"28.000"	"0.3899285803462"	"14"	"0.0003571"	"0.001519"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASLAQSR"	"[R].vTASLAQSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"581.34351"	"1161.67974"	"1161.67890"	"0.72"	"0.00042"	"7/80"	"7"	"80"	"1417756.52435303"	"HCD"	"MS2"	"0"	"106.5"	"100.000"	"29.1892"	"6401"	"6401"	"6387"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.0"	""	"114.4"	""	"133.5"	""	"180.0"	""	"232.3"	"216.4"	""	"587"	"44"	"34.000"	"27.000"	"0.00129005464131002"	"20"	"7.476E-05"	"0.0001881"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGFTLPR"	"[K].lEGFTLPR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"581.34418"	"1161.68108"	"1161.68292"	"-1.59"	"-0.00092"	"6/62"	"6"	"62"	"8112056.84008789"	"HCD"	"MS2"	"0"	"313.1"	"86.591"	"50.2232"	"14981"	"14981"	"14958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"443.3"	""	"422.6"	""	"452.0"	""	"477.6"	""	"564.1"	"607.1"	""	"588"	"23"	"34.000"	"27.000"	"0.164948104953546"	"18"	"0.0006037"	"0.00373"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGFTLPR"	"[K].lEGFTLPR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"581.34454"	"1161.68181"	"1161.68292"	"-0.96"	"-0.00056"	"6/62"	"6"	"62"	"7165485.04986572"	"HCD"	"MS2"	"19.29664"	"332.3"	"100.000"	"49.9130"	"14807"	"14807"	"14788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"483.3"	""	"459.8"	""	"469.0"	""	"507.8"	"1.4"	"619.8"	"606.9"	""	"587"	"21"	"34.000"	"27.000"	"0.217574555821819"	"17"	"0.000523"	"0.00285"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVPMFVR"	"[R].aLVPMFVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"581.35321"	"1161.69914"	"1161.70155"	"-2.07"	"-0.00120"	"5/58"	"5"	"58"	"4380016.89855957"	"HCD"	"MS2"	"34.39052"	"202.3"	"100.000"	"53.8828"	"16405"	"16405"	"16395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"268.3"	""	"292.7"	""	"315.4"	""	"255.7"	""	"379.0"	"407.4"	""	"499"	"15"	"33.000"	"26.000"	"0.706432302951944"	"18"	"0.001966"	"0.02793"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVPMFVR"	"[R].aLVPMFVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"581.35376"	"1161.70024"	"1161.70155"	"-1.13"	"-0.00065"	"5/58"	"5"	"58"	"5386405.42425537"	"HCD"	"MS2"	"33.59167"	"243.0"	"100.000"	"54.0663"	"16533"	"16533"	"16518"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"337.2"	""	"363.1"	""	"364.7"	""	"294.1"	""	"458.9"	"486.3"	""	"510"	"20"	"34.000"	"27.000"	"0.267633319306342"	"19"	"0.0008731"	"0.009515"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVDILGLR"	"[K].fVDILGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"581.36279"	"1161.71831"	"1161.71931"	"-0.86"	"-0.00050"	"6/56"	"6"	"56"	"2006839.2713623"	"HCD"	"MS2"	"0"	"101.1"	"100.000"	"67.5361"	"22021"	"22021"	"21994"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.2"	""	"137.9"	""	"137.7"	""	"169.8"	"0.5"	"188.2"	"199.4"	""	"378"	"34"	"32.000"	"25.000"	"0.00716905321600259"	"22"	"0.0001889"	"0.0004958"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVDILGLR"	"[K].fVDILGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"581.36438"	"1161.72148"	"1161.71931"	"1.87"	"0.00109"	"6/56"	"6"	"56"	"1863607.97003174"	"HCD"	"MS2"	"0"	"99.2"	"100.000"	"67.5935"	"21994"	"21994"	"21971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.1"	""	"129.1"	""	"140.7"	""	"172.3"	"1.8"	"179.7"	"196.9"	""	"334"	"23"	"32.000"	"25.000"	"0.078472316137071"	"18"	"0.0001889"	"0.00084"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESLGIK"	"[K].gESLGIk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"581.36523"	"1161.72319"	"1161.72434"	"-0.99"	"-0.00058"	"6/50"	"6"	"50"	"11345591.0861206"	"HCD"	"MS2"	"8.125466"	"803.0"	"94.814"	"34.4533"	"8501"	"8501"	"8483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"765.8"	""	"846.8"	""	"892.4"	""	"1586.1"	"14.9"	"1853.5"	"1681.2"	""	"310"	"22"	"31.000"	"24.000"	"0.108226022631962"	""	"0.001557"	"0.02093"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESLGIK"	"[K].gESLGIk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"581.36523"	"1161.72319"	"1161.72434"	"-0.99"	"-0.00058"	"6/50"	"6"	"50"	"12572894.7182617"	"HCD"	"MS2"	"9.689967"	"825.8"	"86.266"	"34.4879"	"8558"	"8558"	"8538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"820.6"	""	"884.1"	""	"867.9"	""	"1661.4"	"4.2"	"1912.4"	"1705.9"	""	"310"	"21"	"31.000"	"24.000"	"0.130716887453463"	""	"0.001217"	"0.01836"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSAIAK"	"[R].lTSAIAk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"581.38403"	"1161.76079"	"1161.76073"	"0.05"	"0.00003"	"6/50"	"6"	"50"	"20913457.815918"	"HCD"	"MS2"	"3.556723"	"740.8"	"55.650"	"36.9291"	"9560"	"9560"	"9542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1097.3"	""	"1051.9"	""	"1060.3"	""	"1165.5"	"2.6"	"1302.5"	"1333.2"	""	"70"	"31"	"25.000"	"18.000"	"0.00293810995281789"	"18"	"0.001422"	"0.01959"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSAIAK"	"[R].lTSAIAk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"581.38409"	"1161.76091"	"1161.76073"	"0.16"	"0.00009"	"10/50"	"10"	"50"	"16481702.0625"	"HCD"	"MS2"	"2.352436"	"715.0"	"63.658"	"36.8519"	"9485"	"9485"	"9466"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1039.2"	""	"992.0"	""	"1015.4"	""	"1131.2"	""	"1282.6"	"1313.3"	""	"70"	"27"	"25.000"	"18.000"	"0.00679310057157472"	"17"	"0.00274"	"0.04332"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFTNFHR"	"[R].lFTNFHR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"3"	"3"	"0.5946"	"0.0000"	"1"	"1"	"1"	"388.55499"	"1163.65042"	"1163.65229"	"-1.61"	"-0.00062"	"6/54"	"6"	"54"	"14352368.3388062"	"HCD"	"MS2"	"2.577329"	"248.0"	"100.000"	"35.7790"	"9045"	"9045"	"9019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.7"	""	"301.6"	""	"336.4"	""	"451.9"	""	"488.5"	"465.9"	""	"794"	"37"	"35.000"	"28.000"	"0.00752992250720826"	""	"0.0009404"	"0.01011"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFTNFHR"	"[R].lFTNFHR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"3"	"3"	"0.3846"	"0.0000"	"1"	"1"	"1"	"388.55524"	"1163.65116"	"1163.65229"	"-0.98"	"-0.00038"	"9/54"	"9"	"54"	"15175766.4138794"	"HCD"	"MS2"	"2.834676"	"258.2"	"100.000"	"35.8453"	"9115"	"9115"	"9097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"320.1"	""	"327.4"	""	"346.9"	""	"471.3"	""	"480.2"	"502.5"	""	"785"	"26"	"35.000"	"28.000"	"0.0911674192570165"	""	"0.001058"	"0.0138"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALISFLR"	"[K].dALISFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"582.35229"	"1163.69731"	"1163.69857"	"-1.08"	"-0.00063"	"5/64"	"5"	"64"	"3816857.62817383"	"HCD"	"MS2"	"31.75236"	"185.4"	"100.000"	"61.5306"	"19578"	"19578"	"19555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.9"	""	"263.5"	""	"284.5"	""	"298.4"	"3.1"	"311.7"	"323.2"	""	"390"	"35"	"32.000"	"25.000"	"0.00690294815112697"	"25"	"0.0001889"	"0.0008896"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALISFLR"	"[K].dALISFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"582.35260"	"1163.69792"	"1163.69857"	"-0.56"	"-0.00033"	"5/64"	"5"	"64"	"3747484.96893311"	"HCD"	"MS2"	"41.21299"	"187.6"	"100.000"	"61.3626"	"19456"	"19456"	"19433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.0"	""	"267.2"	""	"295.6"	""	"318.7"	""	"308.3"	"303.9"	""	"412"	"34"	"33.000"	"26.000"	"0.00753125270723038"	"25"	"0.0001889"	"0.000733"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILSLMTR"	"[K].tILSLMTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"582.35394"	"1163.70061"	"1163.70195"	"-1.15"	"-0.00067"	"6/68"	"6"	"68"	"14637229.4318237"	"HCD"	"MS2"	"0"	"549.7"	"80.141"	"53.8075"	"16431"	"16431"	"16425"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"852.5"	""	"821.0"	""	"908.2"	""	"661.8"	"28.4"	"883.4"	"1044.8"	""	"399"	"34"	"32.000"	"26.000"	"0.00862865092914842"	"19"	"0.0003839"	"0.002101"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILSLMTR"	"[K].tILSLMTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"582.35406"	"1163.70085"	"1163.70195"	"-0.94"	"-0.00055"	"6/68"	"6"	"68"	"15401231.4156494"	"HCD"	"MS2"	"15.84717"	"412.8"	"52.798"	"53.5944"	"16292"	"16292"	"16286"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"649.2"	""	"618.7"	""	"664.5"	""	"519.3"	"27.8"	"658.6"	"766.5"	""	"397"	"31"	"32.000"	"25.000"	"0.0145131108071458"	"18"	"0.0005564"	"0.003294"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"582.35486"	"1163.70244"	"1163.70361"	"-1.00"	"-0.00058"	"6/54"	"6"	"54"	"11142912.055603"	"HCD"	"MS2"	"7.062564"	"845.4"	"100.000"	"28.0516"	"5937"	"5937"	"5916"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1153.7"	""	"1051.1"	""	"1134.7"	""	"1430.8"	""	"1580.6"	"1673.5"	""	"372"	"34"	"32.000"	"25.000"	"0.00775377053254825"	""	"0.00103"	"0.01124"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"582.35492"	"1163.70256"	"1163.70361"	"-0.90"	"-0.00052"	"6/54"	"6"	"54"	"10160673.9303589"	"HCD"	"MS2"	"0"	"733.0"	"100.000"	"28.1377"	"6007"	"6007"	"5985"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1029.1"	""	"905.0"	""	"1000.2"	""	"1240.5"	""	"1366.7"	"1411.0"	""	"372"	"34"	"32.000"	"25.000"	"0.00764738481254412"	""	"0.0006037"	"0.005985"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLSGPK"	"[K].fGLSGPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"582.36322"	"1163.71916"	"1163.71887"	"0.26"	"0.00015"	"6/48"	"6"	"48"	"10139206.244751"	"HCD"	"MS2"	"12.04245"	"693.9"	"88.682"	"38.9790"	"10359"	"10359"	"10342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"676.6"	""	"650.3"	""	"740.0"	""	"1440.0"	""	"1514.5"	"1587.5"	""	"297"	"30"	"31.000"	"24.000"	"0.0162827012127263"	"22"	"0.001217"	"0.01729"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLSGPK"	"[K].fGLSGPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"582.36322"	"1163.71916"	"1163.71887"	"0.26"	"0.00015"	"6/48"	"6"	"48"	"8071282.89624023"	"HCD"	"MS2"	"14.90733"	"597.1"	"95.742"	"39.0926"	"10448"	"10448"	"10430"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"615.2"	""	"563.7"	""	"663.9"	""	"1213.4"	""	"1294.7"	"1337.4"	""	"297"	"31"	"31.000"	"24.000"	"0.0123232838975892"	"23"	"0.00103"	"0.01172"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMAALAK"	"[K].tMAALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"582.36444"	"1163.72161"	"1163.72224"	"-0.54"	"-0.00032"	"6/48"	"6"	"48"	"14563814.3078613"	"HCD"	"MS2"	"5.469956"	"668.2"	"59.958"	"35.7308"	"9068"	"9068"	"9049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1001.6"	""	"954.9"	""	"1004.9"	""	"744.5"	"11.0"	"1251.6"	"1364.9"	""	"297"	"33"	"31.000"	"24.000"	"0.00707500015406043"	"23"	"0.001217"	"0.01792"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMAALAK"	"[K].tMAALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"582.36469"	"1163.72209"	"1163.72224"	"-0.12"	"-0.00007"	"6/48"	"6"	"48"	"15692310.7047729"	"HCD"	"MS2"	"3.136887"	"932.2"	"78.247"	"35.6460"	"8990"	"8990"	"8971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1428.3"	""	"1325.2"	""	"1429.0"	""	"1025.3"	"8.9"	"1745.7"	"1870.5"	""	"235"	"33"	"30.000"	"23.000"	"0.00529709627836216"	""	"0.00103"	"0.0117"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFTLTALR"	"[R].lFTLTALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.37036"	"1163.73345"	"1163.73496"	"-1.30"	"-0.00076"	"12/60"	"12"	"60"	"6528215.19750977"	"HCD"	"MS2"	"4.347872"	"298.7"	"100.000"	"61.2837"	"19477"	"19477"	"19459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"389.0"	""	"404.5"	""	"433.5"	""	"496.7"	"0.5"	"532.2"	"573.6"	""	"141"	"36"	"28.000"	"21.000"	"0.00171865662694997"	"15"	"0.0003839"	"0.001715"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFTLTALR"	"[R].lFTLTALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.37109"	"1163.73491"	"1163.73496"	"-0.04"	"-0.00002"	"6/60"	"6"	"60"	"5840707.79492188"	"HCD"	"MS2"	"5.568346"	"279.0"	"100.000"	"61.1598"	"19373"	"19373"	"19353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.4"	""	"402.1"	""	"397.6"	""	"472.9"	""	"491.0"	"529.0"	""	"145"	"37"	"28.000"	"21.000"	"0.00146331561366913"	"15"	"0.0004557"	"0.002543"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.81348"	"1164.61968"	"1164.62105"	"-1.18"	"-0.00069"	"7/66"	"7"	"66"	"2261638.39776611"	"HCD"	"MS2"	"0"	"162.0"	"100.000"	"30.2137"	"6820"	"6820"	"6790"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.3"	""	"234.4"	""	"263.6"	""	"232.0"	""	"238.2"	"266.8"	""	"643"	"33"	"35.000"	"28.000"	"0.0148313600221162"	"15"	"0.0001308"	"0.000292"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISYSNPVR"	"[K].iSYSnPVR.[Q]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.32562"	"1165.64397"	"1165.64145"	"2.16"	"0.00126"	"3/66"	"3"	"66"	"318738.425537109"	"HCD"	"MS2"	"52.67968"	"11.5"	"100.000"	"83.4171"	"28439"	"28439"	"28414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.3"	""	"14.7"	""	"21.7"	""	"17.8"	""	"20.5"	"20.7"	""	"671"	"7"	"35.000"	"28.000"	"7.15636568360676"	"13"	"0.007192"	"0.2674"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGSMPK"	"[R].gMGSMPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"583.32690"	"1165.64653"	"1165.64736"	"-0.71"	"-0.00041"	"6/48"	"6"	"48"	"2732255.67858887"	"HCD"	"MS2"	"0"	"265.7"	"100.000"	"31.2870"	"7216"	"7216"	"7190"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"388.8"	""	"311.1"	""	"312.1"	""	"356.9"	""	"572.1"	"586.9"	""	"653"	"22"	"35.000"	"28.000"	"0.2132471254394"	"20"	"0.0005564"	"0.003374"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGSMPK"	"[R].gMGSMPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"583.32739"	"1165.64751"	"1165.64736"	"0.13"	"0.00008"	"4/48"	"4"	"48"	"1665486.5289917"	"HCD"	"MS2"	"5.334298"	"165.4"	"100.000"	"31.4701"	"7333"	"7333"	"7311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.6"	"2.7"	"180.2"	""	"209.4"	""	"252.6"	""	"337.7"	"337.8"	""	"652"	"19"	"35.000"	"28.000"	"0.459428148285531"	"18"	"0.0006037"	"0.004006"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPTSK"	"[K].sSTPTSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"583.34467"	"1165.68205"	"1165.68287"	"-0.70"	"-0.00041"	"6/58"	"6"	"58"	"442167.009155273"	"HCD"	"MS2"	"0"	"35.6"	"100.000"	"22.6305"	"3756"	"3756"	"3746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.9"	""	"36.6"	""	"43.8"	""	"75.5"	""	"53.7"	"79.0"	""	"432"	"22"	"33.000"	"26.000"	"0.135660605503677"	"19"	"0.0006037"	"0.00408"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPTSK"	"[K].sSTPTSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"583.34503"	"1165.68279"	"1165.68287"	"-0.07"	"-0.00004"	"6/58"	"6"	"58"	"470124.747009277"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"22.6271"	"3788"	"3788"	"3779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.5"	""	"33.3"	""	"49.3"	""	"61.9"	"0.2"	"45.7"	"80.7"	""	"430"	"21"	"33.000"	"26.000"	"0.174758560975281"	"18"	"0.0006037"	"0.00583"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAALAHLDR"	"[K].aAALAHLDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"389.56528"	"1166.68128"	"1166.68432"	"-2.61"	"-0.00101"	"6/64"	"6"	"64"	"5705839.36627197"	"HCD"	"MS2"	"67.70494"	"368.9"	"100.000"	"29.4108"	"6450"	"6450"	"6422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"489.3"	""	"475.2"	""	"527.1"	""	"591.6"	""	"638.7"	"779.0"	""	"413"	"17"	"33.000"	"26.000"	"0.462295915114362"	"18"	"0.000523"	"0.002949"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMEYLR"	"[R].nIMEYLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"584.32123"	"1167.63518"	"1167.63935"	"-3.57"	"-0.00208"	"9/60"	"9"	"60"	"11719910.9057617"	"HCD"	"MS2"	"25.719"	"596.7"	"100.000"	"50.2301"	"14984"	"14984"	"14958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"910.0"	""	"886.3"	""	"669.9"	""	"829.6"	""	"1261.1"	"1107.1"	""	"502"	"29"	"33.000"	"27.000"	"0.0293544347145988"	"21"	"0.00103"	"0.01154"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMEYLR"	"[R].nIMEYLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"584.32245"	"1167.63762"	"1167.63935"	"-1.48"	"-0.00086"	"5/60"	"5"	"60"	"4953436.20953369"	"HCD"	"MS2"	"0"	"265.4"	"100.000"	"50.5393"	"15108"	"15108"	"15092"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"382.4"	""	"374.1"	""	"297.6"	""	"378.4"	""	"578.4"	"508.4"	""	"496"	"27"	"33.000"	"26.000"	"0.048691334865534"	"20"	"0.0006037"	"0.006146"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMEYLR"	"[R].nIMEYLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"584.32257"	"1167.63786"	"1167.63935"	"-1.27"	"-0.00074"	"5/60"	"5"	"60"	"8429537.72625732"	"HCD"	"MS2"	"13.27532"	"457.0"	"100.000"	"49.9654"	"14828"	"14828"	"14809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"690.1"	""	"685.7"	""	"549.7"	""	"636.0"	"0.7"	"946.4"	"825.3"	""	"504"	"27"	"34.000"	"27.000"	"0.0490230740568911"	"18"	"0.0009404"	"0.009883"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMEYLR"	"[R].nIMEYLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"584.32269"	"1167.63811"	"1167.63935"	"-1.06"	"-0.00062"	"5/60"	"5"	"60"	"10419711.2648926"	"HCD"	"MS2"	"0"	"317.4"	"59.965"	"50.2609"	"14945"	"14945"	"14924"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"452.8"	""	"464.5"	""	"339.8"	""	"440.9"	""	"699.3"	"620.7"	""	"504"	"27"	"34.000"	"27.000"	"0.0463874544370177"	"22"	"0.0008731"	"0.009372"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTAYK"	"[R].gIGTAYk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"584.35931"	"1167.71135"	"1167.71378"	"-2.08"	"-0.00121"	"8/48"	"8"	"48"	"1181537.82049561"	"HCD"	"MS2"	"41.8064"	"129.4"	"100.000"	"32.2809"	"7623"	"7623"	"7592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.8"	""	"165.6"	""	"191.7"	""	"204.1"	"4.0"	"228.1"	"244.7"	""	"199"	"15"	"29.000"	"22.000"	"0.348195441193215"	"21"	"0.0006037"	"0.00433"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFYDLR"	"[K].lIFYDLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"584.84924"	"1168.69121"	"1168.69276"	"-1.33"	"-0.00078"	"5/48"	"5"	"48"	"6065090.67242432"	"HCD"	"MS2"	"16.52971"	"249.0"	"100.000"	"61.5329"	"19579"	"19579"	"19555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.2"	""	"354.8"	""	"359.9"	""	"396.8"	""	"433.1"	"473.2"	""	"275"	"44"	"31.000"	"24.000"	"0.000527597462551884"	""	"0.0006037"	"0.004123"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFYDLR"	"[K].lIFYDLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"584.84967"	"1168.69206"	"1168.69276"	"-0.60"	"-0.00035"	"5/48"	"5"	"48"	"5346881.78063965"	"HCD"	"MS2"	"14.11983"	"235.7"	"100.000"	"61.3603"	"19455"	"19455"	"19433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.7"	""	"333.5"	""	"326.5"	""	"400.5"	""	"411.2"	"432.0"	""	"261"	"40"	"31.000"	"24.000"	"0.00123483949558236"	""	"0.0005564"	"0.003433"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFYDLR"	"[K].lIFYDLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"584.85016"	"1168.69304"	"1168.69276"	"0.24"	"0.00014"	"5/48"	"5"	"48"	"2612478.87768555"	"HCD"	"MS2"	"17.28739"	"120.3"	"100.000"	"61.8377"	"19703"	"19703"	"19683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.9"	""	"143.6"	""	"147.7"	""	"185.9"	"0.3"	"302.4"	"218.8"	""	"270"	"36"	"31.000"	"24.000"	"0.00374398214127999"	"20"	"0.0006037"	"0.003683"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFYDLR"	"[K].lIFYDLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"584.85022"	"1168.69316"	"1168.69276"	"0.34"	"0.00020"	"5/48"	"5"	"48"	"2151654.05755615"	"HCD"	"MS2"	"16.24288"	"106.7"	"100.000"	"61.7088"	"19597"	"19597"	"19577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.0"	""	"117.9"	""	"133.2"	""	"161.5"	""	"298.1"	"187.9"	""	"269"	"35"	"31.000"	"24.000"	"0.00436236785334875"	"20"	"0.003507"	"0.07863"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASYGVSK"	"[R].aSYGVSk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"585.34924"	"1169.69121"	"1169.69304"	"-1.57"	"-0.00092"	"6/56"	"6"	"56"	"3998222.23431396"	"HCD"	"MS2"	"20.31835"	"323.4"	"100.000"	"29.4918"	"6524"	"6524"	"6500"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"437.5"	""	"389.2"	""	"337.7"	""	"629.3"	""	"656.2"	"626.7"	""	"269"	"35"	"31.000"	"24.000"	"0.00384345928083931"	""	"0.0006037"	"0.005846"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASYGVSK"	"[R].aSYGVSk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"585.34930"	"1169.69133"	"1169.69304"	"-1.46"	"-0.00086"	"6/56"	"6"	"56"	"4595920.47088623"	"HCD"	"MS2"	"0"	"364.5"	"100.000"	"29.4430"	"6463"	"6463"	"6438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"501.8"	""	"417.3"	""	"376.8"	""	"683.1"	""	"774.9"	"714.5"	""	"267"	"35"	"31.000"	"24.000"	"0.00377990831439218"	""	"0.0006037"	"0.004439"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIIGVVNR"	"[K].lGIIGVVNR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"585.38159"	"1169.75591"	"1169.75676"	"-0.73"	"-0.00043"	"7/68"	"7"	"68"	"5124835.02282715"	"HCD"	"MS2"	"24.3131"	"236.9"	"100.000"	"48.4536"	"14262"	"14262"	"14239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.4"	""	"328.1"	""	"331.7"	""	"398.6"	"6.8"	"385.8"	"424.2"	""	"120"	"45"	"27.000"	"20.000"	"0.000203306493683522"	""	"0.0001859"	"0.00033"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVGVVAGGGR"	"[R].aVVGVVAGGGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"585.86151"	"1170.71575"	"1170.71562"	"0.11"	"0.00006"	"10/82"	"10"	"82"	"2491145.23809814"	"HCD"	"MS2"	"70.5807"	"146.0"	"100.000"	"32.5886"	"7749"	"7749"	"7720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.9"	""	"236.0"	""	"228.8"	""	"213.3"	"3.1"	"233.0"	"235.2"	""	"290"	"45"	"31.000"	"24.000"	"0.000480140126149757"	"23"	"0"	"8.975E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWVSK"	"[-].mFSWVSk.[D]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"586.30206"	"1171.59685"	"1171.60190"	"-4.31"	"-0.00252"	"6/54"	"6"	"54"	"1231156.09625244"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"72.7927"	"24167"	"24167"	"24143"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.2"	""	"47.9"	""	"59.5"	""	"63.7"	"0.8"	"78.7"	"80.0"	""	"383"	"4"	"32.000"	"25.000"	"6.87335504845185"	"13"	"0.006688"	"0.2487"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLCNFMR"	"[R].lLcNFMR.[Q]"	"N-Term(TMT6plex); C3(Methylthio)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"586.30249"	"1171.59770"	"1171.59874"	"-0.89"	"-0.00052"	"4/56"	"4"	"56"	"2294709.78515625"	"HCD"	"MS2"	"0"	"119.6"	"100.000"	"67.0954"	"21797"	"21797"	"21781"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.1"	""	"173.3"	""	"176.3"	""	"176.9"	"7.9"	"204.6"	"229.8"	""	"385"	"9"	"32.000"	"25.000"	"2.55523433112975"	"16"	"0.003351"	"0.07584"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWVSK"	"[-].mFSWVSk.[D]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"586.30432"	"1171.60137"	"1171.60190"	"-0.45"	"-0.00027"	"5/54"	"5"	"54"	"637335.038146973"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"70.1687"	"23096"	"23096"	"23066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.3"	""	"70.3"	""	"51.3"	""	"51.0"	""	"70.4"	"63.7"	""	"403"	"35"	"33.000"	"26.000"	"0.00698674753661851"	"19"	"0.0007076"	"0.006786"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWVSK"	"[-].mFSWVSk.[D]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"586.30481"	"1171.60234"	"1171.60190"	"0.38"	"0.00022"	"5/54"	"5"	"54"	"417568.467102051"	"HCD"	"MS2"	"47.35395"	"29.9"	"100.000"	"75.5488"	"25292"	"25292"	"25263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.2"	""	"42.5"	""	"44.7"	""	"40.9"	"1.6"	"63.2"	"55.3"	""	"410"	"29"	"33.000"	"26.000"	"0.0288904203676484"	"23"	"0.0006737"	"0.00666"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTTAFFR"	"[R].sLTTAFFR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P23640; Q99P74"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1;Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"P23640; Q99P74"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1; Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.33740"	"1171.66753"	"1171.66727"	"0.22"	"0.00013"	"6/62"	"6"	"62"	"10009003.869751"	"HCD"	"MS2"	"33.77825"	"551.2"	"100.000"	"49.0789"	"14518"	"14518"	"14495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"758.5"	""	"784.9"	""	"739.7"	""	"918.5"	""	"987.8"	"1039.7"	""	"508"	"18"	"34.000"	"27.000"	"0.368836350867287"	"14"	"0.0004166"	"0.00217"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGWGQIR"	"[R].lIGWGQIR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"P81795; C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3 PE=1 SV=2; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"0"	"2"	"2"	"0.2955"	"0.0000"	"1"	"1"	"1"	"586.36053"	"1171.71379"	"1171.71489"	"-0.94"	"-0.00055"	"7/62"	"7"	"62"	"6380661.19787598"	"HCD"	"MS2"	"34.19807"	"320.6"	"100.000"	"51.8541"	"15596"	"15596"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.9"	""	"432.2"	""	"485.6"	""	"520.1"	""	"585.5"	"617.1"	""	"400"	"44"	"33.000"	"26.000"	"0.000736257947285062"	""	"0.0006037"	"0.003907"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGWGQIR"	"[R].lIGWGQIR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"P81795; C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3 PE=1 SV=2; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"0"	"2"	"2"	"0.2188"	"0.0000"	"1"	"1"	"1"	"586.36060"	"1171.71391"	"1171.71489"	"-0.84"	"-0.00049"	"6/62"	"6"	"62"	"6668437.60620117"	"HCD"	"MS2"	"29.70102"	"339.4"	"100.000"	"52.0498"	"15726"	"15726"	"15702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"441.7"	""	"482.0"	""	"516.6"	""	"549.5"	"1.2"	"605.2"	"618.8"	""	"400"	"32"	"33.000"	"26.000"	"0.0134595331256864"	""	"0.0006037"	"0.003811"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILAELTGR"	"[R].aILAELTGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"586.86292"	"1172.71855"	"1172.72004"	"-1.27"	"-0.00074"	"8/68"	"8"	"68"	"3782174.86834717"	"HCD"	"MS2"	"17.74534"	"201.0"	"100.000"	"52.7031"	"15943"	"15943"	"15922"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.8"	""	"263.5"	""	"289.3"	""	"295.3"	""	"367.7"	"422.9"	""	"513"	"41"	"34.000"	"27.000"	"0.00185390454623957"	"20"	"0.0001889"	"0.0004267"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILAELTGR"	"[R].aILAELTGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"586.86328"	"1172.71929"	"1172.72004"	"-0.64"	"-0.00038"	"8/68"	"8"	"68"	"12538836.460144"	"HCD"	"MS2"	"26.46384"	"563.2"	"100.000"	"52.3833"	"15812"	"15812"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"723.3"	""	"667.6"	""	"734.6"	""	"929.3"	"0.3"	"1104.5"	"1185.4"	""	"527"	"40"	"34.000"	"27.000"	"0.00264716260738357"	"19"	"0.0001889"	"0.0006032"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILAELTGR"	"[R].aILAELTGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"586.86328"	"1172.71929"	"1172.72004"	"-0.64"	"-0.00038"	"8/68"	"8"	"68"	"14269011.4675293"	"HCD"	"MS2"	"22.96674"	"605.9"	"97.894"	"52.5889"	"15946"	"15946"	"15926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"779.1"	""	"720.8"	""	"831.5"	""	"1008.6"	""	"1159.2"	"1248.8"	""	"527"	"37"	"34.000"	"27.000"	"0.00554345618878466"	"19"	"0.0001889"	"0.0005458"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILAELTGR"	"[R].aILAELTGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"586.86340"	"1172.71953"	"1172.72004"	"-0.43"	"-0.00025"	"8/68"	"8"	"68"	"3592709.49298096"	"HCD"	"MS2"	"22.81936"	"202.0"	"100.000"	"52.9041"	"16075"	"16075"	"16054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.2"	""	"270.4"	""	"269.9"	""	"303.9"	""	"378.8"	"409.1"	""	"527"	"38"	"34.000"	"27.000"	"0.00404371574967614"	"20"	"0.0001308"	"0.0002487"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPIIPFLL"	"[R].mPIIPFLL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"586.86890"	"1172.73052"	"1172.73146"	"-0.80"	"-0.00047"	"5/60"	"5"	"60"	"138726.268554688"	"HCD"	"MS2"	"8.262973"	"2.3"	"100.000"	"113.3647"	"36639"	"36639"	"36637"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"2.5"	""	"4.8"	""	"2.1"	""	"7.8"	"5.4"	""	"450"	"32"	"33.000"	"26.000"	"0.0154590399003202"	"24"	"0.00905"	"0.4066"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPIIPFLL"	"[R].mPIIPFLL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"586.86890"	"1172.73052"	"1172.73146"	"-0.80"	"-0.00047"	"6/60"	"6"	"60"	"846449.270874023"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"113.7434"	"36686"	"36686"	"36683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"10.9"	""	"12.0"	""	"6.2"	""	"10.4"	"17.0"	""	"450"	"42"	"33.000"	"26.000"	"0.00145942747548353"	"16"	"0.00162"	"0.02226"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPIIPFLL"	"[R].mPIIPFLL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"586.86932"	"1172.73137"	"1172.73146"	"-0.07"	"-0.00004"	"6/60"	"6"	"60"	"898964.544372559"	"HCD"	"MS2"	"0.3601407"	"7.2"	"100.000"	"113.6160"	"36679"	"36679"	"36677"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"10.0"	""	"12.3"	""	"10.3"	""	"12.5"	"14.0"	""	"449"	"42"	"33.000"	"26.000"	"0.0014230375017718"	"17"	"0.001217"	"0.0172"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLQFPVGR"	"[R].aGLQFPVGR.[VI]"	"N-Term(TMT6plex)"	"1"	"9"	"P02262"	"Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q4FZT6; Q00728; P0C0S7; P0C169; Q64598; P0C170; A9UMV8; P02262; P0CC09"	"Histone H2A type 3 OS=Rattus norvegicus OX=10116 PE=2 SV=3; Histone H2A type 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Histone H2A.Z OS=Rattus norvegicus OX=10116 GN=H2afz PE=1 SV=2; Histone H2A type 1-C OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 1-F OS=Rattus norvegicus OX=10116 PE=3 SV=3; Histone H2A type 1-E OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A.J OS=Rattus norvegicus OX=10116 GN=H2afj PE=2 SV=1; Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 2-A OS=Rattus norvegicus OX=10116 GN=Hist2h2aa3 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"587.35083"	"1173.69438"	"1173.69416"	"0.19"	"0.00011"	"8/76"	"8"	"76"	"9603470.33081055"	"HCD"	"MS2"	"43.82479"	"525.8"	"100.000"	"41.1715"	"11298"	"11298"	"11277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"552.7"	""	"594.5"	""	"603.3"	""	"890.6"	"0.5"	"1194.7"	"1165.4"	""	"790"	"33"	"35.000"	"28.000"	"0.0202580246676589"	"25"	"0.0001889"	"0.0003924"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.1600"	"0.0000"	"1"	"1"	"1"	"391.91269"	"1173.72351"	"1173.72434"	"-0.71"	"-0.00028"	"7/52"	"7"	"52"	"4590981.25585938"	"HCD"	"MS2"	"9.51896"	"257.9"	"100.000"	"35.1367"	"8825"	"8825"	"8794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"346.3"	""	"352.7"	""	"394.0"	""	"398.6"	""	"470.4"	"485.3"	""	"505"	"25"	"34.000"	"27.000"	"0.0820845425898222"	""	"0.00103"	"0.01187"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"587.36542"	"1173.72356"	"1173.72434"	"-0.67"	"-0.00039"	"6/52"	"6"	"52"	"16580595.2900391"	"HCD"	"MS2"	"28.82888"	"1024.4"	"100.000"	"34.9646"	"8711"	"8711"	"8686"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1456.8"	""	"1431.0"	""	"1470.2"	""	"1680.2"	""	"1802.4"	"1859.5"	""	"505"	"35"	"34.000"	"27.000"	"0.00757288536044383"	"26"	"0.0008453"	"0.008124"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"391.91281"	"1173.72388"	"1173.72434"	"-0.40"	"-0.00015"	"8/52"	"8"	"52"	"5871007.91912842"	"HCD"	"MS2"	"6.834871"	"335.3"	"100.000"	"35.0448"	"8744"	"8744"	"8718"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"446.5"	""	"457.8"	""	"507.0"	""	"542.5"	""	"599.7"	"623.1"	""	"504"	"21"	"34.000"	"27.000"	"0.184671782351004"	"26"	"0.002424"	"0.03567"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"587.36560"	"1173.72392"	"1173.72434"	"-0.36"	"-0.00021"	"6/52"	"6"	"52"	"19569823.1738281"	"HCD"	"MS2"	"24.08869"	"1265.4"	"100.000"	"35.0359"	"8783"	"8783"	"8762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1774.6"	""	"1768.9"	""	"1812.2"	""	"2070.6"	"1.5"	"2256.0"	"2299.7"	""	"504"	"35"	"34.000"	"27.000"	"0.00768069537386252"	"27"	"0.001217"	"0.01639"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGMPAK"	"[R].lVGMPAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"587.37421"	"1173.74114"	"1173.74297"	"-1.56"	"-0.00092"	"8/50"	"8"	"50"	"5574593.23352051"	"HCD"	"MS2"	"6.103337"	"394.1"	"100.000"	"39.9301"	"10746"	"10746"	"10725"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"578.9"	""	"543.2"	""	"589.2"	""	"485.0"	"6.2"	"758.4"	"774.2"	""	"320"	"16"	"32.000"	"25.000"	"0.39547586320258"	"22"	"0.0009727"	"0.01038"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGMPAK"	"[R].lVGMPAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"587.37457"	"1173.74187"	"1173.74297"	"-0.94"	"-0.00055"	"6/50"	"6"	"50"	"9148030.13635254"	"HCD"	"MS2"	"7.747072"	"391.8"	"61.592"	"39.9935"	"10816"	"10816"	"10797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"588.2"	""	"512.4"	""	"523.5"	""	"460.6"	"0.8"	"800.8"	"831.4"	""	"320"	"19"	"32.000"	"25.000"	"0.217330151453944"	"22"	"0.0008731"	"0.008961"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQAAGK"	"[K].eLQAAGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"587.86176"	"1174.71623"	"1174.71959"	"-2.86"	"-0.00168"	"6/56"	"6"	"56"	"1125202.67590332"	"HCD"	"MS2"	"0"	"101.2"	"100.000"	"28.9533"	"6268"	"6268"	"6252"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.1"	""	"123.5"	""	"134.4"	""	"158.6"	""	"180.2"	"190.2"	""	"477"	"33"	"33.000"	"26.000"	"0.0123165304071389"	"26"	"0.0003571"	"0.001508"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQAAGK"	"[K].eLQAAGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"587.86255"	"1174.71782"	"1174.71959"	"-1.51"	"-0.00089"	"10/56"	"10"	"56"	"1219516.12683105"	"HCD"	"MS2"	"100"	"113.4"	"100.000"	"29.0677"	"6354"	"6354"	"6346"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.6"	""	"148.7"	""	"140.5"	""	"180.0"	""	"220.4"	"225.2"	""	"462"	"27"	"33.000"	"26.000"	"0.0499587978980942"	"23"	"0.0001889"	"0.0008684"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGTIAK"	"[K].nLGTIAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"587.88080"	"1174.75432"	"1174.75598"	"-1.41"	"-0.00083"	"10/60"	"10"	"60"	"50132347.1953125"	"HCD"	"MS2"	"10.57149"	"1439.3"	"42.002"	"35.2196"	"8815"	"8815"	"8795"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2241.7"	""	"2028.2"	""	"2104.5"	""	"2331.6"	""	"2464.3"	"2451.9"	""	"203"	"28"	"30.000"	"23.000"	"0.0165373547312932"	"18"	"0.002711"	"0.04034"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVTGAGK"	"[R].aLVTGAGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"587.88116"	"1174.75505"	"1174.75598"	"-0.79"	"-0.00046"	"7/56"	"7"	"56"	"4759059.82122803"	"HCD"	"MS2"	"13.82141"	"358.1"	"100.000"	"32.1821"	"7582"	"7582"	"7565"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"529.3"	""	"511.1"	""	"515.1"	""	"540.8"	""	"605.9"	"690.7"	""	"204"	"39"	"30.000"	"23.000"	"0.00119288937884027"	""	"0.0003839"	"0.001898"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGTIAK"	"[K].nLGTIAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"587.88116"	"1174.75505"	"1174.75598"	"-0.79"	"-0.00046"	"10/60"	"10"	"60"	"42059616.1375732"	"HCD"	"MS2"	"12.2046"	"2032.6"	"64.468"	"35.2697"	"8879"	"8879"	"8858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3169.0"	""	"2901.9"	""	"2974.4"	""	"3318.3"	""	"3442.8"	"3441.2"	""	"204"	"29"	"30.000"	"23.000"	"0.0128706408528248"	"18"	"0.001966"	"0.02965"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVTGAGK"	"[R].aLVTGAGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"0"	"2"	"2"	"0.5641"	"0.0000"	"1"	"1"	"1"	"587.88129"	"1174.75530"	"1174.75598"	"-0.58"	"-0.00034"	"7/56"	"7"	"56"	"4784205.11883545"	"HCD"	"MS2"	"10.94001"	"355.6"	"100.000"	"32.3117"	"7678"	"7678"	"7657"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"550.4"	""	"501.5"	""	"493.9"	""	"509.7"	""	"638.8"	"674.0"	""	"204"	"39"	"30.000"	"23.000"	"0.00125776692989349"	""	"0.0001889"	"0.001086"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQLLGK"	"[K].tGQLLGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"587.88159"	"1174.75591"	"1174.75598"	"-0.06"	"-0.00004"	"5/56"	"5"	"56"	"6617590.74957275"	"HCD"	"MS2"	"7.912436"	"506.6"	"100.000"	"35.5425"	"8948"	"8948"	"8923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"617.7"	""	"597.3"	""	"654.4"	""	"852.6"	"1.2"	"1037.9"	"1049.2"	""	"204"	"21"	"30.000"	"23.000"	"0.0827180279010918"	"19"	"0.0008125"	"0.007808"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQLLGK"	"[K].tGQLLGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"587.88165"	"1174.75603"	"1174.75598"	"0.04"	"0.00002"	"10/56"	"10"	"56"	"9280326.89587402"	"HCD"	"MS2"	"8.420481"	"451.3"	"63.744"	"35.5840"	"9008"	"9008"	"8986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"526.6"	""	"535.1"	""	"568.1"	""	"779.7"	""	"898.9"	"982.4"	""	"204"	"24"	"30.000"	"23.000"	"0.037204902586412"	"22"	"0.001058"	"0.01463"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AINTAVK"	"[K].aINTAVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"587.88239"	"1174.75749"	"1174.75598"	"1.29"	"0.00076"	"6/56"	"6"	"56"	"1672379.28338623"	"HCD"	"MS2"	"0"	"172.7"	"100.000"	"31.2496"	"7201"	"7201"	"7174"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.8"	""	"244.8"	""	"266.0"	""	"257.0"	"0.9"	"308.0"	"311.7"	""	"203"	"32"	"30.000"	"23.000"	"0.00617257026297899"	""	"0.000494"	"0.002741"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AINTAVK"	"[K].aINTAVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"587.88251"	"1174.75774"	"1174.75598"	"1.50"	"0.00088"	"6/56"	"6"	"56"	"1327528.31518555"	"HCD"	"MS2"	"18.08446"	"149.4"	"100.000"	"31.4013"	"7305"	"7305"	"7280"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.1"	""	"197.0"	""	"218.5"	""	"217.1"	"2.0"	"255.5"	"262.7"	""	"203"	"12"	"30.000"	"23.000"	"0.650827720233939"	"19"	"0.0005564"	"0.003436"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AINTAVK"	"[K].aINTAVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"587.88287"	"1174.75847"	"1174.75598"	"2.12"	"0.00125"	"6/56"	"6"	"56"	"2415196.58660889"	"HCD"	"MS2"	"8.85528"	"212.4"	"100.000"	"31.3300"	"7276"	"7276"	"7248"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"293.7"	"2.7"	"279.1"	""	"324.7"	""	"318.7"	""	"390.2"	"405.0"	""	"203"	"33"	"30.000"	"23.000"	"0.00508705042131681"	""	"0.0004557"	"0.002541"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYYFQGR"	"[K].lYYFQGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"588.32361"	"1175.63994"	"1175.64106"	"-0.95"	"-0.00056"	"5/54"	"5"	"54"	"17739347.5388794"	"HCD"	"MS2"	"49.12822"	"947.8"	"100.000"	"42.4093"	"11802"	"11802"	"11779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1434.6"	""	"1349.0"	""	"1360.6"	""	"1549.3"	""	"1558.7"	"1721.6"	""	"785"	"21"	"35.000"	"28.000"	"0.330247593095739"	"19"	"0.003286"	"0.07113"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYYFQGR"	"[K].lYYFQGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"588.32471"	"1175.64214"	"1175.64106"	"0.92"	"0.00054"	"6/54"	"6"	"54"	"17003729.6392822"	"HCD"	"MS2"	"43.35017"	"900.6"	"100.000"	"42.1867"	"11667"	"11667"	"11644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1366.4"	""	"1256.3"	""	"1297.4"	""	"1434.9"	""	"1512.5"	"1660.7"	""	"803"	"20"	"36.000"	"29.000"	"0.391458339543531"	"18"	"0.004789"	"0.14"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPAFLAGR"	"[R].nTPAFLAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"588.33954"	"1175.67180"	"1175.67342"	"-1.38"	"-0.00081"	"6/80"	"6"	"80"	"7887395.57183838"	"HCD"	"MS2"	"7.076832"	"415.3"	"100.000"	"36.0630"	"9205"	"9205"	"9177"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"572.9"	""	"572.0"	""	"595.3"	""	"629.1"	"0.1"	"772.3"	"793.9"	""	"725"	"34"	"35.000"	"28.000"	"0.0148015777545601"	""	"0.000523"	"0.003217"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPAFLAGR"	"[R].nTPAFLAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"588.34009"	"1175.67290"	"1175.67342"	"-0.45"	"-0.00026"	"6/80"	"6"	"80"	"7522877.03533936"	"HCD"	"MS2"	"3.587601"	"398.8"	"100.000"	"35.9969"	"9134"	"9134"	"9114"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"515.8"	""	"578.7"	""	"566.9"	""	"613.7"	""	"750.2"	"760.6"	""	"720"	"32"	"35.000"	"28.000"	"0.020763592682121"	"27"	"0.000523"	"0.003264"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGGIGGILR"	"[K].gFGGIGGILR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"588.35809"	"1175.70891"	"1175.70981"	"-0.76"	"-0.00045"	"9/74"	"9"	"74"	"6390618.37298584"	"HCD"	"MS2"	"27.09708"	"352.2"	"100.000"	"51.5047"	"15453"	"15453"	"15426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.8"	""	"454.4"	""	"504.4"	""	"578.8"	""	"670.0"	"670.2"	""	"444"	"60"	"33.000"	"26.000"	"2.35154326989358E-05"	"22"	"0.0001859"	"0.0003703"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGGIGGILR"	"[K].gFGGIGGILR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"588.35822"	"1175.70915"	"1175.70981"	"-0.56"	"-0.00033"	"9/74"	"9"	"74"	"5888891.82598877"	"HCD"	"MS2"	"30.43579"	"345.6"	"100.000"	"51.6675"	"15570"	"15570"	"15542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"439.3"	""	"461.4"	""	"464.4"	""	"596.5"	""	"664.0"	"654.3"	""	"442"	"57"	"33.000"	"26.000"	"4.12469911674462E-05"	"21"	"0.0001859"	"0.0003531"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANSANLK"	"[R].aNSANLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"588.36017"	"1175.71306"	"1175.71484"	"-1.52"	"-0.00089"	"6/58"	"6"	"58"	"2913261.91339111"	"HCD"	"MS2"	"0"	"239.9"	"100.000"	"26.6522"	"5406"	"5406"	"5381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"400.9"	""	"274.2"	""	"335.4"	""	"380.0"	""	"413.9"	"470.4"	""	"429"	"24"	"33.000"	"26.000"	"0.0809892349535017"	"19"	"0.0006037"	"0.004261"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEVGSK"	"[K].vVEVGSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"588.37286"	"1175.73845"	"1175.73999"	"-1.31"	"-0.00077"	"6/54"	"6"	"54"	"6176375.27880859"	"HCD"	"MS2"	"24.3699"	"496.6"	"100.000"	"33.0053"	"7962"	"7962"	"7942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"733.7"	""	"665.6"	""	"705.7"	""	"713.1"	""	"905.9"	"985.5"	""	"248"	"39"	"30.000"	"23.000"	"0.0015080706408015"	"20"	"0.0006037"	"0.00439"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEVGSK"	"[K].vVEVGSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"588.37372"	"1175.74016"	"1175.73999"	"0.14"	"0.00008"	"6/54"	"6"	"54"	"6200853.72943115"	"HCD"	"MS2"	"20.71769"	"444.2"	"100.000"	"32.9140"	"7882"	"7882"	"7864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"655.2"	""	"620.0"	""	"605.7"	""	"653.9"	"6.8"	"801.6"	"865.6"	""	"250"	"39"	"30.000"	"23.000"	"0.00153783596351548"	"20"	"0.0009404"	"0.009833"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSGELK"	"[K].gAGSGELk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"588.85248"	"1176.69768"	"1176.69886"	"-1.00"	"-0.00059"	"7/60"	"7"	"60"	"967113.111450195"	"HCD"	"MS2"	"7.661598"	"92.0"	"100.000"	"26.8818"	"5499"	"5499"	"5479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.8"	""	"120.8"	""	"128.3"	""	"151.7"	"1.7"	"172.4"	"174.6"	""	"568"	"35"	"34.000"	"27.000"	"0.00953494824449991"	""	"0.0001859"	"0.0003363"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSGELK"	"[K].gAGSGELk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"588.85254"	"1176.69780"	"1176.69886"	"-0.90"	"-0.00053"	"7/60"	"7"	"60"	"2006252.29467773"	"HCD"	"MS2"	"0"	"176.9"	"100.000"	"26.7543"	"5411"	"5411"	"5384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.4"	""	"238.3"	""	"238.3"	""	"269.3"	""	"323.8"	"343.7"	""	"568"	"37"	"34.000"	"27.000"	"0.00571897686960918"	""	"0.0001889"	"0.0006667"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSSGGAK"	"[R].vLSSGGAk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"588.87140"	"1176.73552"	"1176.73524"	"0.24"	"0.00014"	"4/58"	"4"	"58"	"3757538.36645508"	"HCD"	"MS2"	"10.25522"	"330.8"	"100.000"	"32.2405"	"7649"	"7649"	"7626"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"349.5"	""	"316.7"	""	"359.6"	""	"696.6"	""	"689.7"	"736.1"	""	"267"	"8"	"31.000"	"24.000"	"2.31462833700178"	"17"	"0.005975"	"0.2012"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPENAAGR"	"[R].fSPENAAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"589.31097"	"1177.61467"	"1177.61630"	"-1.38"	"-0.00082"	"8/76"	"8"	"76"	"1176126.91662598"	"HCD"	"MS2"	"49.62804"	"84.1"	"100.000"	"29.1495"	"6343"	"6343"	"6329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.4"	""	"100.3"	""	"115.0"	""	"162.4"	""	"158.9"	"161.3"	""	"657"	"20"	"35.000"	"28.000"	"0.309410732457753"	"20"	"0.0003839"	"0.001737"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPENAAGR"	"[R].fSPENAAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"589.31177"	"1177.61626"	"1177.61630"	"-0.04"	"-0.00002"	"7/76"	"7"	"76"	"1129978.1161499"	"HCD"	"MS2"	"47.8521"	"79.3"	"100.000"	"29.2397"	"6421"	"6421"	"6403"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.0"	""	"83.5"	""	"106.7"	""	"154.0"	""	"159.6"	"155.7"	""	"662"	"13"	"35.000"	"28.000"	"1.69757118101142"	"17"	"0.00274"	"0.04402"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"589.34448"	"1177.68169"	"1177.68287"	"-1.01"	"-0.00059"	"10/52"	"10"	"52"	"2219674.20629883"	"HCD"	"MS2"	"0"	"213.4"	"100.000"	"28.2453"	"6051"	"6051"	"6033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"276.9"	""	"272.3"	""	"300.0"	""	"347.5"	"1.9"	"430.9"	"394.4"	""	"654"	"28"	"35.000"	"28.000"	"0.0573518924102256"	"22"	"0.0003839"	"0.001733"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"589.34491"	"1177.68254"	"1177.68287"	"-0.28"	"-0.00017"	"10/52"	"10"	"52"	"2125400.55975342"	"HCD"	"MS2"	"0"	"205.5"	"100.000"	"28.1777"	"5988"	"5988"	"5972"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"275.5"	""	"276.4"	""	"275.0"	""	"333.1"	""	"384.8"	"407.8"	""	"653"	"27"	"35.000"	"28.000"	"0.058598052916082"	"28"	"0.0003839"	"0.001562"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLATSTK"	"[K].vLATSTk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"589.38129"	"1177.75530"	"1177.75564"	"-0.30"	"-0.00017"	"9/52"	"9"	"52"	"1811690.8203125"	"HCD"	"MS2"	"0"	"187.0"	"100.000"	"31.4747"	"7335"	"7335"	"7311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.8"	""	"252.0"	""	"267.2"	""	"292.2"	""	"358.2"	"347.5"	""	"124"	"26"	"27.000"	"20.000"	"0.014500790879688"	"19"	"0.0006037"	"0.004029"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLATSTK"	"[K].vLATSTk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"589.38184"	"1177.75640"	"1177.75564"	"0.64"	"0.00038"	"6/52"	"6"	"52"	"2228786.1050415"	"HCD"	"MS2"	"0"	"209.6"	"100.000"	"31.3374"	"7237"	"7237"	"7206"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"278.2"	""	"264.7"	""	"289.9"	""	"334.2"	""	"407.8"	"417.9"	""	"124"	"37"	"27.000"	"20.000"	"0.00123706263528071"	"20"	"0.0006037"	"0.004505"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAGIFK"	"[K].iAAGIFk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8K5"	"BRO1 domain-containing protein BROX OS=Rattus norvegicus OX=10116 GN=Brox PE=2 SV=1"	"Q4V8K5"	"BRO1 domain-containing protein BROX OS=Rattus norvegicus OX=10116 GN=Brox PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"589.38843"	"1177.76958"	"1177.77090"	"-1.12"	"-0.00066"	"6/50"	"6"	"50"	"6099419.65203857"	"HCD"	"MS2"	"8.026789"	"433.1"	"100.000"	"48.2129"	"14164"	"14164"	"14146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"583.4"	""	"620.3"	""	"607.5"	""	"693.6"	"2.5"	"806.5"	"789.8"	""	"87"	"36"	"26.000"	"19.000"	"0.0010011271905727"	"19"	"0.0008453"	"0.008317"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAGIFK"	"[K].iAAGIFk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8K5"	"BRO1 domain-containing protein BROX OS=Rattus norvegicus OX=10116 GN=Brox PE=2 SV=1"	"Q4V8K5"	"BRO1 domain-containing protein BROX OS=Rattus norvegicus OX=10116 GN=Brox PE=2 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"589.38879"	"1177.77031"	"1177.77090"	"-0.50"	"-0.00029"	"6/50"	"6"	"50"	"6480639.34002686"	"HCD"	"MS2"	"27.4108"	"474.2"	"100.000"	"47.9219"	"13997"	"13997"	"13976"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"654.8"	""	"672.8"	""	"684.8"	""	"729.4"	"2.8"	"856.7"	"890.6"	""	"87"	"36"	"26.000"	"19.000"	"0.00102444643849476"	"19"	"0.00103"	"0.0128"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSHAVVAR"	"[R].iPSHAVVAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"589.86322"	"1178.71916"	"1178.72071"	"-1.31"	"-0.00077"	"6/64"	"6"	"64"	"4263289.1439209"	"HCD"	"MS2"	"0"	"140.7"	"100.000"	"26.6774"	"5416"	"5416"	"5397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"240.2"	""	"196.0"	""	"205.9"	""	"202.7"	"0.5"	"235.9"	"249.8"	""	"335"	"31"	"32.000"	"25.000"	"0.0137408883675244"	"19"	"0.0001889"	"0.0005828"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSHAVVAR"	"[R].iPSHAVVAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"589.86340"	"1178.71953"	"1178.72071"	"-1.00"	"-0.00059"	"7/64"	"7"	"64"	"3174209.4942627"	"HCD"	"MS2"	"0"	"122.7"	"100.000"	"26.5410"	"5324"	"5324"	"5297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"216.9"	""	"165.5"	""	"181.0"	""	"185.5"	""	"199.0"	"214.8"	""	"335"	"28"	"32.000"	"25.000"	"0.0250043063604482"	"18"	"0.0001889"	"0.0004887"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAHILGIR"	"[K].aVAHILGIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"393.59009"	"1178.75571"	"1178.75709"	"-1.17"	"-0.00046"	"7/66"	"7"	"66"	"21659223.5778198"	"HCD"	"MS2"	"1.711989"	"218.7"	"100.000"	"37.4065"	"9713"	"9713"	"9688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"326.5"	"18.2"	"296.9"	""	"368.6"	""	"326.1"	""	"309.4"	"425.2"	""	"104"	"49"	"27.000"	"20.000"	"6.88657598301225E-05"	"16"	"0.0001308"	"0.0003084"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAHILGIR"	"[K].aVAHILGIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"393.59015"	"1178.75589"	"1178.75709"	"-1.02"	"-0.00040"	"7/66"	"7"	"66"	"17949546.111145"	"HCD"	"MS2"	"8.239944"	"185.4"	"100.000"	"37.4883"	"9790"	"9790"	"9761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.1"	"19.9"	"264.8"	""	"302.5"	""	"281.8"	""	"256.6"	"341.4"	""	"104"	"44"	"27.000"	"20.000"	"0.000201373975359241"	"15"	"0.0001889"	"0.0008313"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"590.34314"	"1179.67900"	"1179.68077"	"-1.49"	"-0.00088"	"10/52"	"10"	"52"	"4992208.44177246"	"HCD"	"MS2"	"8.861932"	"397.0"	"100.000"	"29.5284"	"6539"	"6539"	"6516"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"666.8"	""	"603.3"	""	"610.5"	""	"400.1"	""	"686.0"	"797.5"	""	"547"	"28"	"34.000"	"27.000"	"0.0472016663459321"	"24"	"0.0006037"	"0.004481"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"590.34351"	"1179.67974"	"1179.68077"	"-0.87"	"-0.00052"	"6/52"	"6"	"52"	"4322091.92199707"	"HCD"	"MS2"	"0"	"350.5"	"100.000"	"29.4453"	"6464"	"6464"	"6438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"571.8"	""	"532.0"	""	"528.3"	""	"367.8"	""	"641.3"	"685.6"	""	"545"	"27"	"34.000"	"27.000"	"0.058528380420057"	"25"	"0.0005564"	"0.003416"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LLGMSGK"	"[K].lLGmSGk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"590.36157"	"1179.71587"	"1179.71715"	"-1.09"	"-0.00064"	"5/48"	"5"	"48"	"9831961.91259766"	"HCD"	"MS2"	"3.130187"	"622.7"	"100.000"	"34.3525"	"8460"	"8460"	"8435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"704.6"	""	"787.5"	""	"865.8"	""	"1588.6"	""	"1027.9"	"918.3"	""	"249"	"9"	"30.000"	"23.000"	"1.42616361209969"	"14"	"0.002953"	"0.05264"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVVASSK"	"[K].mVVASSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"590.36176"	"1179.71623"	"1179.71715"	"-0.78"	"-0.00046"	"6/50"	"6"	"50"	"3202195.72668457"	"HCD"	"MS2"	"6.483798"	"254.7"	"100.000"	"31.5531"	"7325"	"7325"	"7302"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"424.4"	""	"376.5"	""	"386.3"	""	"274.5"	"4.7"	"487.1"	"458.2"	""	"249"	"24"	"30.000"	"23.000"	"0.0445830064192782"	"22"	"0.0006737"	"0.006602"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGMSGK"	"[K].lLGmSGk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"590.36194"	"1179.71660"	"1179.71715"	"-0.47"	"-0.00028"	"5/48"	"5"	"48"	"10424224.2585449"	"HCD"	"MS2"	"2.855433"	"568.2"	"92.828"	"34.3705"	"8510"	"8510"	"8492"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"639.8"	""	"689.3"	""	"771.9"	""	"1495.5"	"6.2"	"915.9"	"857.9"	""	"249"	"10"	"30.000"	"23.000"	"1.32485805768927"	"22"	"0.005698"	"0.1843"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVVASSK"	"[K].mVVASSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"590.36224"	"1179.71721"	"1179.71715"	"0.05"	"0.00003"	"10/50"	"10"	"50"	"4596799.54943848"	"HCD"	"MS2"	"0"	"338.5"	"100.000"	"31.6285"	"7398"	"7398"	"7373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"557.6"	""	"526.4"	""	"491.2"	""	"350.6"	"2.9"	"641.4"	"636.0"	""	"191"	"26"	"29.000"	"22.000"	"0.0232810933154216"	""	"0.0006037"	"0.004323"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHTPLLTR"	"[K].lHTPLLTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O35276"	"Neuropilin-2 OS=Rattus norvegicus OX=10116 GN=Nrp2 PE=2 SV=1"	"O35276"	"Neuropilin-2 OS=Rattus norvegicus OX=10116 GN=Nrp2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"393.91821"	"1179.74009"	"1179.74111"	"-0.87"	"-0.00034"	"5/64"	"5"	"64"	"1900445.73498535"	"HCD"	"MS2"	"42.3767"	"115.2"	"100.000"	"32.9416"	"7894"	"7894"	"7864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.7"	""	"165.8"	""	"178.8"	""	"157.6"	"7.1"	"200.2"	"208.1"	""	"97"	"4"	"26.000"	"19.000"	"1.74478427550535"	"13"	"0.002953"	"0.05283"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVASGFK"	"[K].gGVASGFk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"590.85754"	"1180.70781"	"1180.70903"	"-1.03"	"-0.00061"	"11/56"	"11"	"56"	"14020104.4000244"	"HCD"	"MS2"	"0"	"720.7"	"61.477"	"32.7537"	"7817"	"7817"	"7800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"966.9"	""	"924.8"	""	"955.4"	""	"1159.3"	""	"1297.2"	"1535.4"	""	"283"	"35"	"31.000"	"24.000"	"0.00455781233966606"	"22"	"0.000523"	"0.002889"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVASGFK"	"[K].gGVASGFk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"590.85773"	"1180.70818"	"1180.70903"	"-0.72"	"-0.00043"	"7/56"	"7"	"56"	"14142684.6103516"	"HCD"	"MS2"	"0.7639136"	"603.9"	"50.886"	"32.8401"	"7895"	"7895"	"7878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"811.9"	""	"773.3"	""	"770.1"	""	"965.7"	""	"1099.5"	"1313.9"	""	"283"	"36"	"31.000"	"24.000"	"0.00392424794808235"	"18"	"0.000523"	"0.002949"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGADFAK"	"[K].dGADFAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"591.33130"	"1181.65532"	"1181.65666"	"-1.13"	"-0.00067"	"5/54"	"5"	"54"	"1194835.87158203"	"HCD"	"MS2"	"0"	"134.0"	"100.000"	"32.2198"	"7641"	"7641"	"7610"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"210.5"	""	"171.6"	""	"171.7"	""	"206.5"	"1.2"	"233.4"	"274.4"	""	"509"	"22"	"34.000"	"27.000"	"0.166221725648782"	"24"	"0.0004166"	"0.002515"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLWLHIR"	"[R].dLWLHIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"394.57086"	"1181.69803"	"1181.69924"	"-1.03"	"-0.00040"	"9/48"	"9"	"48"	"3200860.5682373"	"HCD"	"MS2"	"3.992174"	"83.0"	"100.000"	"42.3939"	"11752"	"11752"	"11724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.5"	""	"99.2"	"2.6"	"111.0"	""	"143.7"	"1.8"	"159.8"	"166.2"	""	"296"	"21"	"31.000"	"24.000"	"0.10598922471151"	"14"	"0.00103"	"0.01139"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLWLHIR"	"[R].dLWLHIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"394.57086"	"1181.69803"	"1181.69924"	"-1.03"	"-0.00040"	"9/48"	"9"	"48"	"3789439.61395264"	"HCD"	"MS2"	"18.5467"	"85.3"	"100.000"	"42.6157"	"11887"	"11887"	"11859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.1"	""	"110.8"	""	"108.0"	""	"134.0"	""	"166.5"	"196.8"	""	"296"	"32"	"31.000"	"24.000"	"0.00863498754325142"	"21"	"0.0006037"	"0.004694"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILPPGK"	"[R].vILPPGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"591.40454"	"1181.80181"	"1181.80220"	"-0.33"	"-0.00020"	"6/50"	"6"	"50"	"15437566.4841309"	"HCD"	"MS2"	"23.14141"	"582.6"	"82.341"	"40.7081"	"11108"	"11108"	"11085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"861.8"	""	"828.1"	""	"870.4"	""	"870.7"	""	"1005.6"	"1078.5"	""	"31"	"14"	"21.000"	"14.000"	"0.0643178766083263"	""	"0.006688"	"0.2484"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELFYR"	"[R].lLELFYR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"591.85736"	"1182.70745"	"1182.70841"	"-0.82"	"-0.00048"	"5/48"	"5"	"48"	"3359944.12969971"	"HCD"	"MS2"	"0"	"164.2"	"100.000"	"71.3972"	"23545"	"23545"	"23523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"190.5"	""	"233.7"	""	"240.7"	""	"255.1"	""	"282.4"	"356.2"	""	"271"	"26"	"31.000"	"24.000"	"0.0344301801601931"	"24"	"0.0006037"	"0.00465"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELFYR"	"[R].lLELFYR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"591.85736"	"1182.70745"	"1182.70841"	"-0.82"	"-0.00048"	"6/48"	"6"	"48"	"2835234.25030518"	"HCD"	"MS2"	"3.698722"	"128.6"	"100.000"	"71.7011"	"23669"	"23669"	"23651"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.9"	""	"174.4"	""	"188.5"	""	"189.2"	"2.3"	"239.1"	"257.4"	""	"271"	"21"	"31.000"	"24.000"	"0.108877789556151"	"16"	"0.0006737"	"0.00653"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELFYR"	"[R].lLELFYR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"591.85748"	"1182.70769"	"1182.70841"	"-0.61"	"-0.00036"	"6/48"	"6"	"48"	"3193822.42572021"	"HCD"	"MS2"	"8.218393"	"133.3"	"100.000"	"71.6304"	"23692"	"23692"	"23674"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.2"	""	"179.2"	""	"205.4"	""	"196.3"	"0.8"	"235.4"	"276.8"	""	"271"	"21"	"31.000"	"24.000"	"0.096814252183232"	"19"	"0.0009404"	"0.009947"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELFYR"	"[R].lLELFYR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"591.85767"	"1182.70806"	"1182.70841"	"-0.30"	"-0.00018"	"5/48"	"5"	"48"	"3082915.50140381"	"HCD"	"MS2"	"32.51045"	"149.6"	"100.000"	"71.3287"	"23569"	"23569"	"23546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.0"	""	"192.4"	""	"220.5"	""	"241.5"	""	"249.7"	"337.8"	""	"266"	"34"	"31.000"	"24.000"	"0.00580566056879421"	"23"	"0.000523"	"0.002829"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIASSFLR"	"[K].yIASSFLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"593.34387"	"1185.68047"	"1185.68292"	"-2.07"	"-0.00123"	"6/58"	"6"	"58"	"15501941.6782837"	"HCD"	"MS2"	"6.862509"	"741.4"	"94.386"	"46.3604"	"13406"	"13406"	"13388"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1145.7"	""	"1175.3"	""	"884.7"	""	"1221.8"	"9.1"	"1261.1"	"1320.2"	""	"493"	"40"	"33.000"	"26.000"	"0.0025108277715534"	"26"	"0.000523"	"0.003145"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIASSFLR"	"[K].yIASSFLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"593.34399"	"1185.68071"	"1185.68292"	"-1.87"	"-0.00111"	"6/58"	"6"	"58"	"13287159.1522217"	"HCD"	"MS2"	"14.67716"	"680.0"	"99.099"	"46.0896"	"13247"	"13247"	"13229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1041.3"	""	"1077.6"	""	"823.5"	""	"1157.7"	""	"1118.3"	"1222.0"	""	"493"	"40"	"33.000"	"26.000"	"0.00260505516021167"	"23"	"0.000494"	"0.002666"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIASSFLR"	"[K].yIASSFLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"593.34436"	"1185.68144"	"1185.68292"	"-1.25"	"-0.00074"	"6/58"	"6"	"58"	"21341808.0838623"	"HCD"	"MS2"	"0.9474113"	"466.1"	"45.997"	"46.6449"	"13523"	"13523"	"13506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"679.1"	""	"738.5"	""	"564.2"	""	"765.6"	"1.8"	"785.5"	"878.4"	""	"491"	"45"	"33.000"	"26.000"	"0.000699924984672209"	"25"	"0.0006037"	"0.005377"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIASSFLR"	"[K].yIASSFLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"593.34442"	"1185.68157"	"1185.68292"	"-1.15"	"-0.00068"	"6/58"	"6"	"58"	"20201407.0241699"	"HCD"	"MS2"	"1.488714"	"502.2"	"53.606"	"46.3897"	"13370"	"13370"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"745.5"	""	"805.0"	""	"567.6"	""	"804.4"	""	"880.0"	"956.8"	""	"479"	"49"	"33.000"	"26.000"	"0.000313549070558358"	"20"	"0.000494"	"0.002645"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPVLAK"	"[R].sIPVLAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.40161"	"1185.79595"	"1185.79712"	"-0.99"	"-0.00058"	"10/48"	"10"	"48"	"10338806.1566162"	"HCD"	"MS2"	"2.988393"	"593.0"	"100.000"	"42.6823"	"11914"	"11914"	"11891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"921.0"	""	"864.5"	""	"928.2"	""	"867.1"	""	"1007.6"	"1021.8"	""	"115"	"30"	"27.000"	"20.000"	"0.00634845206443692"	"14"	"0.001125"	"0.01521"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPVLAK"	"[R].sIPVLAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.40179"	"1185.79631"	"1185.79712"	"-0.68"	"-0.00040"	"10/48"	"10"	"48"	"11651082.5653076"	"HCD"	"MS2"	"5.164246"	"648.2"	"100.000"	"42.4673"	"11782"	"11782"	"11756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1011.2"	""	"899.8"	""	"1013.6"	""	"982.7"	""	"1085.0"	"1141.9"	""	"115"	"31"	"27.000"	"20.000"	"0.00422345474190341"	"14"	"0.00103"	"0.01216"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVILAK"	"[R].aLVILAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"593.41949"	"1185.83171"	"1185.83350"	"-1.51"	"-0.00089"	"12/50"	"12"	"50"	"4009930.83581543"	"HCD"	"MS2"	"0"	"246.6"	"100.000"	"50.3709"	"14989"	"14989"	"14970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"316.0"	""	"345.3"	""	"353.9"	""	"372.1"	""	"503.2"	"448.1"	""	"29"	"37"	"21.000"	"14.000"	"0.000276928722492105"	""	"0.0008731"	"0.009438"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVALAK"	"[K].lLVALAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"593.41956"	"1185.83183"	"1185.83350"	"-1.41"	"-0.00083"	"12/50"	"12"	"50"	"21890150.9189453"	"HCD"	"MS2"	"14.25229"	"549.6"	"46.181"	"55.6714"	"17190"	"17190"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"655.0"	""	"662.0"	""	"813.8"	""	"960.4"	""	"986.5"	"1137.3"	""	"29"	"39"	"21.000"	"14.000"	"0.000167250722384058"	""	"0.002711"	"0.04226"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVILAK"	"[R].aLVILAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"593.41956"	"1185.83183"	"1185.83350"	"-1.41"	"-0.00083"	"12/50"	"12"	"50"	"16155320.3967896"	"HCD"	"MS2"	"25.06187"	"903.4"	"100.000"	"50.3721"	"15040"	"15040"	"15031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1305.3"	""	"1303.3"	""	"1431.1"	""	"1416.1"	""	"1401.9"	"1692.4"	""	"29"	"40"	"21.000"	"14.000"	"0.000161201100455831"	""	"0.001817"	"0.02528"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVALAK"	"[K].lLVALAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"593.41968"	"1185.83208"	"1185.83350"	"-1.20"	"-0.00071"	"12/50"	"12"	"50"	"25098390.5089111"	"HCD"	"MS2"	"14.75502"	"567.4"	"39.238"	"55.4656"	"17052"	"17052"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"647.8"	""	"673.0"	""	"835.7"	""	"971.4"	""	"1040.4"	"1218.8"	""	"25"	"41"	"20.000"	"13.000"	"9.37367761665569E-05"	""	"0.002829"	"0.04705"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVILAK"	"[R].aLVILAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"593.41974"	"1185.83220"	"1185.83350"	"-1.10"	"-0.00065"	"12/50"	"12"	"50"	"15886157.1621704"	"HCD"	"MS2"	"33.79799"	"564.2"	"67.023"	"50.0731"	"14870"	"14870"	"14857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"839.0"	""	"783.2"	""	"887.4"	""	"908.2"	""	"874.7"	"1054.9"	""	"25"	"37"	"20.000"	"13.000"	"0.000233297461354334"	""	"0.002829"	"0.04619"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVALAK"	"[K].lLVALAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"593.42017"	"1185.83306"	"1185.83350"	"-0.38"	"-0.00022"	"12/50"	"12"	"50"	"14062485.1165771"	"HCD"	"MS2"	"3.968733"	"805.0"	"100.000"	"55.1735"	"16932"	"16932"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1016.4"	""	"1032.0"	""	"1231.1"	""	"1406.6"	""	"1383.2"	"1568.9"	""	"25"	"40"	"20.000"	"13.000"	"0.000135179243912242"	""	"0.00162"	"0.02233"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVALAK"	"[K].lLVALAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"395.94925"	"1185.83319"	"1185.83350"	"-0.26"	"-0.00010"	"8/50"	"8"	"50"	"1847415.13452148"	"HCD"	"MS2"	"0"	"103.2"	"100.000"	"55.5036"	"17121"	"17121"	"17093"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.4"	""	"134.2"	""	"139.7"	""	"175.9"	"0.8"	"190.9"	"213.9"	""	"25"	"34"	"20.000"	"13.000"	"0.000481847947082214"	""	"0.004883"	"0.1438"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVALAK"	"[K].lLVALAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"593.42047"	"1185.83367"	"1185.83350"	"0.14"	"0.00008"	"12/50"	"12"	"50"	"15548439.3660889"	"HCD"	"MS2"	"7.050576"	"867.4"	"100.000"	"55.3683"	"17065"	"17065"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1071.6"	""	"1135.7"	""	"1320.5"	""	"1526.6"	""	"1475.5"	"1696.8"	""	"25"	"42"	"20.000"	"13.000"	"8.76819123024964E-05"	""	"0.001783"	"0.02509"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGSPLK"	"[K].vQGSPLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"593.88141"	"1186.75554"	"1186.75598"	"-0.37"	"-0.00022"	"5/58"	"5"	"58"	"1763592.21405029"	"HCD"	"MS2"	"21.59798"	"153.3"	"100.000"	"31.7917"	"7423"	"7423"	"7398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.3"	""	"141.5"	""	"172.1"	""	"330.7"	"2.4"	"378.3"	"285.8"	""	"381"	"28"	"32.000"	"25.000"	"0.0296411452820767"	"19"	"0.001007"	"0.01093"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGSPLK"	"[K].vQGSPLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"593.88159"	"1186.75591"	"1186.75598"	"-0.06"	"-0.00004"	"5/58"	"5"	"58"	"1792556.09283447"	"HCD"	"MS2"	"0"	"150.3"	"100.000"	"31.9059"	"7512"	"7512"	"7482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.6"	""	"143.1"	""	"161.9"	""	"323.5"	""	"356.6"	"303.5"	""	"383"	"29"	"32.000"	"25.000"	"0.0254782021042804"	"21"	"0.0006037"	"0.005856"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFNEVFR"	"[R].fFNEVFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.32410"	"1187.64092"	"1187.64106"	"-0.12"	"-0.00007"	"4/56"	"4"	"56"	"5568568.7947998"	"HCD"	"MS2"	"33.8541"	"282.1"	"100.000"	"56.9842"	"17726"	"17726"	"17701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"441.1"	""	"401.8"	""	"380.9"	""	"452.0"	""	"503.2"	"493.5"	""	"587"	"19"	"34.000"	"27.000"	"0.406076732228218"	"14"	"0.001217"	"0.01696"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFNEVFR"	"[R].fFNEVFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.32471"	"1187.64214"	"1187.64106"	"0.91"	"0.00054"	"5/56"	"5"	"56"	"5307028.43981934"	"HCD"	"MS2"	"40.94996"	"272.8"	"100.000"	"56.7814"	"17589"	"17589"	"17563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"400.3"	""	"384.9"	""	"395.9"	""	"436.1"	"4.1"	"480.0"	"481.3"	""	"588"	"17"	"34.000"	"27.000"	"0.614253062471087"	"14"	"0.00119"	"0.01576"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAGAVIGK"	"[K].nAGAVIGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"594.37933"	"1187.75139"	"1187.75123"	"0.14"	"0.00008"	"7/72"	"7"	"72"	"2618680.54412842"	"HCD"	"MS2"	"6.626407"	"216.8"	"100.000"	"32.1130"	"7554"	"7554"	"7535"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.8"	""	"289.5"	""	"319.6"	""	"371.6"	""	"406.4"	"390.3"	""	"382"	"36"	"32.000"	"25.000"	"0.00490945594508853"	"23"	"0.0002277"	"0.001317"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAGAVIGK"	"[K].nAGAVIGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"594.37994"	"1187.75261"	"1187.75123"	"1.16"	"0.00069"	"6/72"	"6"	"72"	"4162862.72558594"	"HCD"	"MS2"	"0"	"294.9"	"100.000"	"32.1922"	"7629"	"7629"	"7610"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"385.8"	""	"378.7"	""	"432.4"	""	"505.2"	""	"565.9"	"532.0"	""	"382"	"33"	"32.000"	"25.000"	"0.0103284075682606"	"22"	"0.0003839"	"0.001817"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILGEVK"	"[R].aILGEVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"594.39056"	"1187.77385"	"1187.77638"	"-2.13"	"-0.00126"	"6/48"	"6"	"48"	"13962694.0439453"	"HCD"	"MS2"	"8.284721"	"934.1"	"100.000"	"39.8472"	"10715"	"10715"	"10693"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1395.1"	""	"1274.5"	""	"1389.7"	""	"1460.5"	""	"1684.1"	"1641.0"	""	"209"	"38"	"30.000"	"23.000"	"0.00185830198349068"	""	"0.0008731"	"0.00916"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILGEVK"	"[R].aILGEVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"594.39111"	"1187.77495"	"1187.77638"	"-1.20"	"-0.00072"	"6/48"	"6"	"48"	"18297725.9274902"	"HCD"	"MS2"	"5.256001"	"852.2"	"70.690"	"39.9981"	"10818"	"10818"	"10797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1265.1"	""	"1158.2"	""	"1283.5"	""	"1359.1"	""	"1477.6"	"1525.5"	""	"206"	"38"	"30.000"	"23.000"	"0.00178171084999156"	""	"0.001217"	"0.01831"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLGALK"	"[R].dLLGALk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V890"	"Protein fem-1 homolog A OS=Rattus norvegicus OX=10116 GN=Fem1a PE=2 SV=1"	"Q4V890"	"Protein fem-1 homolog A OS=Rattus norvegicus OX=10116 GN=Fem1a PE=2 SV=1"	"0"	"2"	"2"	"0.0526"	"0.0000"	"1"	"1"	"3"	"594.39124"	"1187.77519"	"1187.77638"	"-1.00"	"-0.00059"	"6/48"	"6"	"48"	"7741783.50750732"	"HCD"	"MS2"	"34.40245"	"593.1"	"100.000"	"44.3048"	"12523"	"12523"	"12502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"816.6"	""	"809.1"	""	"891.6"	""	"932.2"	""	"1062.0"	"1110.3"	""	"207"	"19"	"30.000"	"23.000"	"0.126165423488724"	""	"0.001966"	"0.03047"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISAPLTK"	"[K].iSAPLTk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"594.39160"	"1187.77593"	"1187.77638"	"-0.38"	"-0.00023"	"5/56"	"5"	"56"	"9865960.6862793"	"HCD"	"MS2"	"22.20893"	"704.6"	"100.000"	"37.4455"	"9729"	"9729"	"9704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"804.2"	""	"892.3"	""	"831.4"	""	"1272.4"	"3.0"	"1435.7"	"1452.3"	""	"207"	"25"	"30.000"	"23.000"	"0.0296442419885331"	"21"	"0.00162"	"0.02191"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LAVQIGK"	"[RK].lAVqIGk.[A]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"2"	"4"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1;Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"Q64542; P11506; Q64568; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2b2 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"594.39191"	"1187.77654"	"1187.77638"	"0.13"	"0.00008"	"10/56"	"10"	"56"	"4576428.42675781"	"HCD"	"MS2"	"37.9044"	"330.5"	"100.000"	"47.1425"	"13678"	"13678"	"13656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"440.1"	""	"425.4"	""	"479.2"	""	"512.4"	""	"633.6"	"649.1"	""	"207"	"24"	"30.000"	"23.000"	"0.0412990773944817"	""	"0.007874"	"0.3217"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LGLELGK"	"[R].lGLELGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3;Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3; Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"594.39191"	"1187.77654"	"1187.77638"	"0.13"	"0.00008"	"10/48"	"10"	"48"	"4576428.42675781"	"HCD"	"MS2"	"37.9044"	"330.5"	"100.000"	"47.1425"	"13678"	"13678"	"13656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"440.1"	""	"425.4"	""	"479.2"	""	"512.4"	""	"633.6"	"649.1"	""	"207"	"24"	"30.000"	"23.000"	"0.0412990773944817"	""	"0.0006037"	"0.004587"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLELGK"	"[R].lGLELGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3;Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3; Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"594.39191"	"1187.77654"	"1187.77638"	"0.13"	"0.00008"	"6/48"	"6"	"48"	"6706742.40966797"	"HCD"	"MS2"	"41.10798"	"461.4"	"100.000"	"47.3552"	"13813"	"13813"	"13794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"673.2"	""	"572.9"	""	"659.2"	""	"703.1"	"0.6"	"892.3"	"871.7"	""	"207"	"33"	"30.000"	"23.000"	"0.00562264093094669"	""	"0.0009404"	"0.009748"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASLLVK"	"[K].vASLLVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"594.40875"	"1187.81023"	"1187.81277"	"-2.14"	"-0.00127"	"6/48"	"6"	"48"	"10561236.1445923"	"HCD"	"MS2"	"15.04062"	"663.3"	"100.000"	"47.9998"	"14029"	"14029"	"14006"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1000.0"	""	"962.7"	""	"1005.8"	""	"1028.0"	""	"1105.0"	"1174.5"	""	"74"	"37"	"25.000"	"18.000"	"0.000711543939696759"	""	"0.0008731"	"0.008933"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSIAVIK"	"[K].vSIAVIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q01986"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2"	"Q01986"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"594.40881"	"1187.81035"	"1187.81277"	"-2.03"	"-0.00121"	"6/48"	"6"	"48"	"8071184.15405273"	"HCD"	"MS2"	"53.90028"	"455.5"	"74.965"	"44.6122"	"12697"	"12697"	"12685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"606.2"	""	"619.5"	""	"694.9"	""	"719.0"	""	"812.7"	"869.7"	""	"74"	"34"	"25.000"	"18.000"	"0.00158198267876087"	""	"0.002651"	"0.03915"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSIAVIK"	"[K].vSIAVIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q01986"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2"	"Q01986"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"594.40930"	"1187.81133"	"1187.81277"	"-1.21"	"-0.00072"	"6/48"	"6"	"48"	"7359217.76605225"	"HCD"	"MS2"	"53.73891"	"551.6"	"100.000"	"44.3644"	"12547"	"12547"	"12533"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"760.3"	""	"757.5"	""	"837.2"	""	"852.7"	""	"989.4"	"1030.0"	""	"70"	"32"	"25.000"	"18.000"	"0.00208481750235154"	""	"0.0008731"	"0.009471"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASLLVK"	"[K].vASLLVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"594.40973"	"1187.81218"	"1187.81277"	"-0.49"	"-0.00029"	"6/48"	"6"	"48"	"14585386.157959"	"HCD"	"MS2"	"3.126251"	"810.5"	"81.387"	"48.3022"	"14200"	"14200"	"14186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1245.7"	""	"1138.2"	""	"1230.7"	""	"1209.8"	"8.7"	"1421.2"	"1416.0"	""	"62"	"37"	"24.000"	"17.000"	"0.00059753272308919"	""	"0.001999"	"0.03134"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IISGLVK"	"[R].iISGLVk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"0"	"2"	"2"	"0.0400"	"0.0000"	"1"	"1"	"1"	"594.40979"	"1187.81230"	"1187.81277"	"-0.39"	"-0.00023"	"9/48"	"9"	"48"	"6500691.77148438"	"HCD"	"MS2"	"50.42239"	"496.8"	"100.000"	"47.5266"	"13835"	"13835"	"13816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"655.5"	""	"592.4"	""	"689.8"	""	"919.1"	"0.8"	"908.0"	"942.8"	""	"62"	"25"	"24.000"	"17.000"	"0.00978051433246134"	""	"0.0003839"	"0.001841"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISGLVK"	"[R].iISGLVk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"594.41016"	"1187.81304"	"1187.81277"	"0.23"	"0.00013"	"10/48"	"10"	"48"	"5437067.17980957"	"HCD"	"MS2"	"53.64061"	"421.1"	"100.000"	"47.8801"	"14028"	"14028"	"14002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"506.1"	""	"489.2"	""	"564.1"	""	"758.4"	""	"848.3"	"832.4"	""	"62"	"26"	"24.000"	"17.000"	"0.00723371999307111"	""	"0.001587"	"0.02128"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSGGDGK"	"[R].iPSGGDGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"594.85236"	"1188.69744"	"1188.69886"	"-1.20"	"-0.00071"	"7/62"	"7"	"62"	"1471980.09411621"	"HCD"	"MS2"	"0"	"118.0"	"100.000"	"30.1312"	"6786"	"6786"	"6761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.1"	""	"143.1"	""	"154.4"	""	"198.3"	""	"241.8"	"235.2"	""	"824"	"19"	"36.000"	"29.000"	"0.576629976899919"	"21"	"0.00109"	"0.01488"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPIIPFLL"	"[R].mPIIPFLL.[-]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"594.86621"	"1188.72515"	"1188.72637"	"-1.03"	"-0.00061"	"5/60"	"5"	"60"	"581906.434509277"	"HCD"	"MS2"	"8.372883"	"5.0"	"100.000"	"99.3727"	"33992"	"33992"	"33990"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.3"	""	"6.0"	""	"4.6"	""	"14.1"	""	"7.9"	"10.8"	""	"543"	"26"	"34.000"	"27.000"	"0.0621970567726451"	"27"	"0.008433"	"0.3567"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPIIPFLL"	"[R].mPIIPFLL.[-]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"594.86646"	"1188.72563"	"1188.72637"	"-0.62"	"-0.00037"	"6/60"	"6"	"60"	"494121.336853027"	"HCD"	"MS2"	"6.329031"	"5.4"	"100.000"	"99.5682"	"34057"	"34057"	"34052"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	"8.0"	""	"7.3"	""	"12.9"	""	"8.7"	"7.1"	""	"542"	"38"	"34.000"	"27.000"	"0.00428518218642274"	""	"0.002711"	"0.04209"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPIIPFLL"	"[R].mPIIPFLL.[-]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"594.86670"	"1188.72612"	"1188.72637"	"-0.21"	"-0.00012"	"6/60"	"6"	"60"	"1581317.71624756"	"HCD"	"MS2"	"2.650493"	"11.6"	"100.000"	"99.3150"	"33979"	"33979"	"33975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"10.2"	""	"12.5"	""	"37.5"	""	"21.0"	"22.2"	""	"542"	"41"	"34.000"	"27.000"	"0.00239314653013431"	""	"0.001058"	"0.01347"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPIIPFLL"	"[R].mPIIPFLL.[-]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"594.86670"	"1188.72612"	"1188.72637"	"-0.21"	"-0.00012"	"6/60"	"6"	"60"	"1544802.03552246"	"HCD"	"MS2"	"2.117842"	"10.0"	"100.000"	"99.1137"	"33915"	"33915"	"33912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"5.7"	""	"11.7"	""	"36.3"	""	"16.4"	"17.1"	""	"542"	"40"	"34.000"	"27.000"	"0.0024658649688334"	"23"	"0.0009727"	"0.0103"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADNVK"	"[K].aIADNVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"594.86938"	"1188.73149"	"1188.73524"	"-3.16"	"-0.00188"	"6/52"	"6"	"52"	"3505377.58087158"	"HCD"	"MS2"	"22.07422"	"295.0"	"100.000"	"31.1351"	"7154"	"7154"	"7126"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"398.6"	""	"327.5"	""	"381.2"	""	"482.0"	""	"565.6"	"648.3"	""	"492"	"36"	"33.000"	"26.000"	"0.00555821199474361"	"26"	"0.0004557"	"0.002607"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADNVK"	"[K].aIADNVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"594.86981"	"1188.73235"	"1188.73524"	"-2.44"	"-0.00145"	"6/52"	"6"	"52"	"3380843.99468994"	"HCD"	"MS2"	"0"	"277.8"	"100.000"	"31.2520"	"7244"	"7244"	"7216"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"375.2"	""	"327.2"	""	"352.8"	""	"450.8"	""	"522.6"	"607.8"	""	"496"	"37"	"33.000"	"26.000"	"0.00546325762837257"	"26"	"0.0004166"	"0.002377"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVILSK"	"[K].nGVILSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"594.88953"	"1188.77178"	"1188.77163"	"0.12"	"0.00007"	"6/60"	"6"	"60"	"15293249.5488281"	"HCD"	"MS2"	"9.278778"	"1026.2"	"100.000"	"35.6207"	"9023"	"9023"	"9001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1594.7"	""	"1403.7"	""	"1454.6"	""	"1728.7"	"3.7"	"1836.1"	"1689.9"	""	"199"	"27"	"29.000"	"22.000"	"0.0198986256028458"	""	"0.001523"	"0.02053"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVILSK"	"[K].nGVILSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"594.88959"	"1188.77190"	"1188.77163"	"0.23"	"0.00013"	"10/60"	"10"	"60"	"17983111.2974854"	"HCD"	"MS2"	"7.299545"	"1270.5"	"100.000"	"35.5677"	"8958"	"8958"	"8939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1981.3"	""	"1758.1"	""	"1798.4"	""	"2086.4"	"4.0"	"2291.0"	"2105.4"	""	"199"	"28"	"29.000"	"22.000"	"0.0141196223408065"	""	"0.001966"	"0.02863"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTIGAK"	"[K].eLTIGAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"595.37183"	"1189.73638"	"1189.75564"	"-16.20"	"-0.00963"	"6/52"	"6"	"52"	"13733896.7063599"	"HCD"	"MS2"	"2.789763"	"764.5"	"100.000"	"37.1334"	"9644"	"9644"	"9622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1079.9"	""	"1151.9"	""	"1053.5"	""	"1288.0"	""	"1359.0"	"1314.4"	""	"376"	"13"	"32.000"	"25.000"	"0.920784180412678"	"20"	"0.005698"	"0.1843"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGMPAK"	"[R].lVGmPAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"595.37219"	"1189.73711"	"1189.73789"	"-0.65"	"-0.00039"	"5/50"	"5"	"50"	"2883417.11474609"	"HCD"	"MS2"	"8.112171"	"220.5"	"100.000"	"32.5817"	"7746"	"7746"	"7720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"296.3"	""	"288.5"	""	"340.5"	""	"370.8"	""	"385.7"	"407.1"	""	"376"	"16"	"32.000"	"25.000"	"0.521384179674546"	"14"	"0.004291"	"0.1115"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTIGAK"	"[K].eLTIGAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"595.38147"	"1189.75566"	"1189.75564"	"0.02"	"0.00001"	"10/52"	"10"	"52"	"30249627.0248413"	"HCD"	"MS2"	"45.33224"	"1240.2"	"63.825"	"37.2021"	"9672"	"9672"	"9654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1387.7"	""	"1553.6"	""	"1544.7"	""	"2524.8"	""	"2398.5"	"2367.4"	""	"255"	"28"	"31.000"	"24.000"	"0.019077004615204"	""	"0.001587"	"0.02144"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTIGAK"	"[K].eLTIGAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.3667"	"0.0000"	"1"	"1"	"1"	"595.38232"	"1189.75737"	"1189.75564"	"1.45"	"0.00086"	"10/52"	"10"	"52"	"34138810.3076172"	"HCD"	"MS2"	"19.72746"	"1161.4"	"52.614"	"37.1223"	"9596"	"9596"	"9578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1292.5"	""	"1397.3"	""	"1464.9"	""	"2402.0"	""	"2248.7"	"2217.9"	""	"254"	"30"	"31.000"	"24.000"	"0.0116360002245494"	""	"0.002587"	"0.03891"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVVVMK"	"[K].gVVVVMk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"595.39093"	"1189.77458"	"1189.77427"	"0.26"	"0.00016"	"6/50"	"6"	"50"	"20757979.501709"	"HCD"	"MS2"	"51.32099"	"817.3"	"53.041"	"40.3242"	"10951"	"10951"	"10925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1202.1"	""	"1013.6"	""	"1141.3"	""	"1393.4"	""	"1482.1"	"1517.4"	""	"135"	"15"	"28.000"	"21.000"	"0.226622889613994"	""	"0.005603"	"0.1811"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGVITK"	"[R].tIGVITk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"3"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"595.39941"	"1189.79155"	"1189.79203"	"-0.40"	"-0.00024"	"6/58"	"6"	"58"	"39230631.0168457"	"HCD"	"MS2"	"50.02507"	"769.1"	"29.845"	"38.3663"	"10150"	"10150"	"10129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1214.1"	""	"1206.8"	""	"1224.5"	""	"1002.1"	""	"1348.3"	"1279.3"	""	"69"	"35"	"25.000"	"18.000"	"0.00110108056000976"	"16"	"0.004883"	"0.1456"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLATVTK"	"[K].vLATVTk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.4250"	"0.0000"	"1"	"1"	"1"	"595.39948"	"1189.79167"	"1189.79203"	"-0.30"	"-0.00018"	"6/52"	"6"	"52"	"22458197.241272"	"HCD"	"MS2"	"20.35797"	"1368.3"	"93.403"	"37.7817"	"9910"	"9910"	"9889"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1939.6"	""	"1994.2"	""	"2055.6"	""	"2206.2"	"5.2"	"2502.6"	"2250.1"	""	"69"	"40"	"25.000"	"18.000"	"0.000333287553251486"	""	"0.00103"	"0.01223"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGVITK"	"[R].tIGVITk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"3"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.39960"	"1189.79192"	"1189.79203"	"-0.09"	"-0.00006"	"6/58"	"6"	"58"	"36960473.6796875"	"HCD"	"MS2"	"42.02733"	"830.5"	"32.165"	"38.2898"	"10075"	"10075"	"10055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1295.8"	""	"1349.4"	""	"1301.5"	""	"1109.2"	""	"1434.6"	"1370.9"	""	"69"	"34"	"25.000"	"18.000"	"0.00129962810649448"	"15"	"0.002829"	"0.04812"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLATVTK"	"[K].vLATVTk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.4250"	"0.0000"	"1"	"1"	"1"	"595.39966"	"1189.79204"	"1189.79203"	"0.01"	"0.00000"	"6/52"	"6"	"52"	"23290014.3846436"	"HCD"	"MS2"	"34.06433"	"1306.1"	"89.381"	"37.6793"	"9825"	"9825"	"9800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1858.1"	""	"1900.3"	""	"1962.6"	""	"2085.0"	""	"2406.2"	"2160.4"	""	"69"	"40"	"25.000"	"18.000"	"0.00032871467658816"	""	"0.00103"	"0.01187"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPALHIAAR"	"[R].lPALHIAAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"397.58997"	"1190.75534"	"1190.75709"	"-1.47"	"-0.00058"	"7/66"	"7"	"66"	"8290194.29602051"	"HCD"	"MS2"	"4.717015"	"139.7"	"100.000"	"37.6418"	"9853"	"9853"	"9825"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.9"	""	"204.7"	""	"202.0"	""	"226.6"	"2.6"	"256.5"	"256.6"	""	"195"	"46"	"29.000"	"22.000"	"0.000266688700814904"	"15"	"0.0001308"	"0.0002191"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPALHIAAR"	"[R].lPALHIAAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"397.59030"	"1190.75635"	"1190.75709"	"-0.62"	"-0.00025"	"7/66"	"7"	"66"	"7607154.58007813"	"HCD"	"MS2"	"38.01197"	"136.3"	"100.000"	"37.5279"	"9763"	"9763"	"9736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.0"	""	"180.3"	""	"196.8"	""	"228.1"	"3.1"	"243.2"	"259.6"	""	"185"	"41"	"29.000"	"22.000"	"0.00065787250012933"	"15"	"7.476E-05"	"0.0001922"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVLMGK"	"[K].aVVLmGk.[N]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.38025"	"1191.75322"	"1191.75354"	"-0.26"	"-0.00016"	"6/50"	"6"	"50"	"7598290.43640137"	"HCD"	"MS2"	"33.78317"	"470.0"	"100.000"	"35.2398"	"8824"	"8824"	"8795"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.4"	""	"522.7"	""	"588.0"	""	"1099.5"	""	"856.4"	"814.1"	""	"221"	"22"	"30.000"	"23.000"	"0.0700426030938904"	"14"	"0.006061"	"0.2141"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVSVTK"	"[K].sLVSVTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"596.38867"	"1191.77007"	"1191.77130"	"-1.03"	"-0.00061"	"12/58"	"12"	"58"	"79944375.2020264"	"HCD"	"MS2"	"18.30471"	"1656.4"	"29.451"	"36.5098"	"9388"	"9388"	"9369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2654.8"	""	"2218.0"	""	"2436.8"	""	"2714.3"	""	"2731.4"	"2916.6"	""	"109"	"41"	"27.000"	"20.000"	"0.000410578782234876"	"18"	"0.002587"	"0.03893"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVSVTK"	"[K].sLVSVTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"596.38879"	"1191.77031"	"1191.77130"	"-0.83"	"-0.00049"	"12/58"	"12"	"58"	"69515438.2883301"	"HCD"	"MS2"	"12.55478"	"1925.6"	"39.352"	"36.4205"	"9308"	"9308"	"9290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3058.7"	""	"2571.9"	""	"2826.7"	""	"3137.0"	""	"3228.8"	"3412.0"	""	"109"	"43"	"27.000"	"20.000"	"0.000257274357488657"	"19"	"0.002424"	"0.03568"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVGGIK"	"[K].iFVGGIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P04256; Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"P04256; Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"596.39618"	"1191.78508"	"1191.78655"	"-1.23"	"-0.00073"	"6/50"	"6"	"50"	"53101538.458252"	"HCD"	"MS2"	"0"	"835.8"	"22.267"	"49.9325"	"14863"	"14863"	"14846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"700.2"	""	"580.4"	""	"519.0"	""	"1930.7"	"2.8"	"2160.5"	"2084.9"	""	"72"	"27"	"25.000"	"18.000"	"0.00705184082462157"	""	"0.006441"	"0.2307"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFVGGIK"	"[K].lFVGGIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"596.39618"	"1191.78508"	"1191.78655"	"-1.23"	"-0.00073"	"6/50"	"6"	"50"	"53101538.458252"	"HCD"	"MS2"	"0"	"835.8"	"22.267"	"49.9325"	"14863"	"14863"	"14846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"700.2"	""	"580.4"	""	"519.0"	""	"1930.7"	"2.8"	"2160.5"	"2084.9"	""	"72"	"27"	"25.000"	"18.000"	"0.00705184082462157"	""	"0.006441"	"0.2307"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVVLFK"	"[K].aGVVLFk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.39618"	"1191.78508"	"1191.78655"	"-1.23"	"-0.00073"	"6/50"	"6"	"50"	"5096486.79473877"	"HCD"	"MS2"	"53.33469"	"324.6"	"100.000"	"47.1148"	"13667"	"13667"	"13640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"448.9"	""	"490.6"	""	"510.0"	""	"465.0"	""	"555.3"	"607.4"	""	"72"	"11"	"25.000"	"18.000"	"0.288604102819564"	"13"	"0.004346"	"0.1244"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVGGIK"	"[K].iFVGGIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P04256; Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"P04256; Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"596.39636"	"1191.78545"	"1191.78655"	"-0.93"	"-0.00055"	"6/50"	"6"	"50"	"56543958.4963379"	"HCD"	"MS2"	"3.629687"	"905.8"	"22.512"	"49.6641"	"14706"	"14706"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"782.9"	""	"623.7"	""	"561.2"	""	"2138.9"	""	"2346.5"	"2193.9"	""	"72"	"27"	"25.000"	"18.000"	"0.0073164852393704"	""	"0.006441"	"0.2306"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFVGGIK"	"[K].lFVGGIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"596.39636"	"1191.78545"	"1191.78655"	"-0.93"	"-0.00055"	"6/50"	"6"	"50"	"56543958.4963379"	"HCD"	"MS2"	"3.629687"	"905.8"	"22.512"	"49.6641"	"14706"	"14706"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"782.9"	""	"623.7"	""	"561.2"	""	"2138.9"	""	"2346.5"	"2193.9"	""	"72"	"27"	"25.000"	"18.000"	"0.0073164852393704"	""	"0.006441"	"0.2306"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAFLK"	"[R].aLAAFLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"596.39648"	"1191.78569"	"1191.78655"	"-0.72"	"-0.00043"	"6/50"	"6"	"50"	"9951368.47229004"	"HCD"	"MS2"	"2.180589"	"671.9"	"100.000"	"55.3578"	"17007"	"17007"	"16987"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1063.4"	""	"1109.2"	""	"1211.6"	""	"1112.4"	"0.9"	"1050.0"	"792.0"	""	"72"	"35"	"25.000"	"18.000"	"0.00105027372504042"	""	"0.0007076"	"0.007073"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAFLK"	"[R].aLAAFLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"596.39655"	"1191.78581"	"1191.78655"	"-0.62"	"-0.00037"	"6/50"	"6"	"50"	"11196797.2143555"	"HCD"	"MS2"	"3.602611"	"739.2"	"100.000"	"55.5636"	"17145"	"17145"	"17125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1148.9"	""	"1215.6"	""	"1328.9"	""	"1241.2"	""	"1142.9"	"898.2"	""	"72"	"34"	"25.000"	"18.000"	"0.00146656900009481"	""	"0.00119"	"0.0156"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAFLK"	"[R].aLAAFLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"596.39661"	"1191.78594"	"1191.78655"	"-0.52"	"-0.00031"	"6/50"	"6"	"50"	"5233008.43615723"	"HCD"	"MS2"	"1.687549"	"352.2"	"100.000"	"55.8767"	"17273"	"17273"	"17253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"521.2"	""	"560.4"	""	"665.2"	""	"548.9"	""	"567.9"	"463.2"	""	"72"	"34"	"25.000"	"18.000"	"0.00152160701135617"	""	"0.0006037"	"0.004374"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FLGGLVK"	"[R].fLGGLVk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.0476"	"0.0000"	"1"	"1"	"1"	"596.39667"	"1191.78606"	"1191.78655"	"-0.41"	"-0.00025"	"6/50"	"6"	"50"	"9426938.73822021"	"HCD"	"MS2"	"0"	"745.3"	"100.000"	"53.3814"	"16211"	"16211"	"16204"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1001.2"	""	"996.9"	""	"1050.7"	""	"1198.1"	"25.3"	"1368.2"	"1423.3"	""	"72"	"21"	"25.000"	"18.000"	"0.0265645522846476"	""	"0.0006037"	"0.005227"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAFLK"	"[R].aLAAFLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"596.39734"	"1191.78740"	"1191.78655"	"0.71"	"0.00042"	"6/50"	"6"	"50"	"5659482.11889648"	"HCD"	"MS2"	"2.528143"	"394.1"	"100.000"	"55.6679"	"17134"	"17134"	"17115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"596.6"	""	"631.1"	""	"723.2"	""	"628.1"	"0.4"	"621.7"	"519.5"	""	"71"	"34"	"25.000"	"18.000"	"0.00151784824583813"	""	"0.0008453"	"0.008263"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLMTER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.83167"	"1192.65605"	"1192.65572"	"0.28"	"0.00016"	"7/72"	"7"	"72"	"702558.676452637"	"HCD"	"MS2"	"0"	"69.6"	"100.000"	"32.2796"	"7665"	"7665"	"7642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.4"	""	"86.4"	""	"87.2"	""	"113.6"	"2.4"	"146.9"	"139.3"	""	"699"	"28"	"35.000"	"28.000"	"0.0582702900786596"	"14"	"0"	"0.0001356"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLGLDLR"	"[K].yNLGLDLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"596.84827"	"1192.68926"	"1192.68874"	"0.43"	"0.00026"	"5/68"	"5"	"68"	"7283245.51879883"	"HCD"	"MS2"	"34.51042"	"356.8"	"100.000"	"47.9674"	"14064"	"14064"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"456.4"	""	"524.8"	""	"514.3"	""	"604.6"	"3.7"	"616.1"	"659.1"	""	"633"	"33"	"35.000"	"28.000"	"0.0154658471732007"	"19"	"0.0007076"	"0.007"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLGLDLR"	"[K].yNLGLDLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"596.84827"	"1192.68926"	"1192.68874"	"0.43"	"0.00026"	"5/68"	"5"	"68"	"7698290.7880249"	"HCD"	"MS2"	"19.55061"	"366.4"	"100.000"	"47.7268"	"13917"	"13917"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"478.5"	""	"514.3"	""	"540.7"	""	"578.8"	"1.5"	"658.8"	"698.6"	""	"633"	"36"	"35.000"	"28.000"	"0.00832479819434889"	"20"	"0.0006037"	"0.005333"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSALMAK"	"[K].nSALMAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WUC8"	"Pleiotropic regulator 1 OS=Rattus norvegicus OX=10116 GN=Plrg1 PE=2 SV=1"	"Q9WUC8"	"Pleiotropic regulator 1 OS=Rattus norvegicus OX=10116 GN=Plrg1 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"596.85870"	"1192.71013"	"1192.71240"	"-1.90"	"-0.00113"	"6/60"	"6"	"60"	"815953.655944824"	"HCD"	"MS2"	"0"	"93.0"	"100.000"	"31.8032"	"7428"	"7428"	"7398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.3"	""	"126.6"	""	"119.9"	""	"148.2"	"5.2"	"181.6"	"171.7"	""	"489"	"7"	"33.000"	"26.000"	"5.17939297568258"	"15"	"0.001587"	"0.0214"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFLLNLR"	"[R].tSFLLNLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"596.86566"	"1192.72405"	"1192.72512"	"-0.90"	"-0.00054"	"5/62"	"5"	"62"	"14345314.178833"	"HCD"	"MS2"	"34.19786"	"556.1"	"54.410"	"53.4478"	"16236"	"16236"	"16229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"713.7"	""	"766.0"	""	"837.2"	""	"833.2"	""	"996.3"	"1136.5"	""	"332"	"18"	"32.000"	"25.000"	"0.289139940983008"	"14"	"0.00103"	"0.01131"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALSGLLYR"	"[R].aALSGLLYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.86566"	"1192.72405"	"1192.72512"	"-0.90"	"-0.00054"	"7/64"	"7"	"64"	"8782258.88195801"	"HCD"	"MS2"	"13.05246"	"431.3"	"100.000"	"48.2497"	"14179"	"14179"	"14159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"661.2"	""	"615.4"	""	"614.4"	""	"681.5"	""	"743.2"	"768.3"	""	"332"	"45"	"32.000"	"25.000"	"0.000501311985586735"	"15"	"0.0001859"	"0.0003409"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFLLNLR"	"[R].tSFLLNLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"596.86572"	"1192.72417"	"1192.72512"	"-0.80"	"-0.00048"	"4/62"	"4"	"62"	"12400281.7799072"	"HCD"	"MS2"	"47.8746"	"858.0"	"100.000"	"53.6289"	"16363"	"16363"	"16355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1140.5"	""	"1227.0"	""	"1210.9"	""	"1296.6"	""	"1557.0"	"1709.7"	""	"332"	"15"	"32.000"	"25.000"	"0.540888923663335"	"14"	"0.00103"	"0.01308"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFLLNLR"	"[R].tSFLLNLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"596.86578"	"1192.72429"	"1192.72512"	"-0.70"	"-0.00042"	"5/62"	"5"	"62"	"4218075.94940186"	"HCD"	"MS2"	"13.95995"	"252.6"	"100.000"	"53.7202"	"16341"	"16341"	"16328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"323.9"	""	"369.7"	""	"362.0"	""	"351.5"	""	"461.9"	"528.6"	""	"332"	"26"	"32.000"	"25.000"	"0.0414102724672531"	"19"	"0.0004166"	"0.002526"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALSGLLYR"	"[R].aALSGLLYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.86584"	"1192.72441"	"1192.72512"	"-0.60"	"-0.00036"	"7/64"	"7"	"64"	"7261959.84552002"	"HCD"	"MS2"	"21.2866"	"380.4"	"100.000"	"47.9654"	"14015"	"14015"	"13992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"549.8"	""	"540.2"	""	"553.0"	""	"612.6"	"1.9"	"657.5"	"686.2"	""	"332"	"47"	"32.000"	"25.000"	"0.000338928498815142"	"15"	"0.0001889"	"0.0004972"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFLLNLR"	"[R].tSFLLNLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"596.86591"	"1192.72453"	"1192.72512"	"-0.49"	"-0.00029"	"6/62"	"6"	"62"	"4977479.75250244"	"HCD"	"MS2"	"23.99113"	"293.9"	"100.000"	"53.9104"	"16471"	"16471"	"16457"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.7"	""	"403.8"	""	"458.3"	""	"411.0"	""	"522.4"	"617.5"	""	"332"	"29"	"32.000"	"25.000"	"0.0199575896146491"	"19"	"0.0003571"	"0.001483"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLGFK"	"[K].aAQLGFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"596.87567"	"1192.74407"	"1192.74541"	"-1.13"	"-0.00067"	"6/58"	"6"	"58"	"19365570.8886719"	"HCD"	"MS2"	"28.87597"	"664.9"	"45.813"	"38.0179"	"10007"	"10007"	"9985"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1073.6"	""	"978.7"	""	"974.4"	""	"964.6"	"9.4"	"1115.4"	"1174.1"	""	"208"	"27"	"30.000"	"23.000"	"0.0200001539806656"	"22"	"0.002393"	"0.03532"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLGFK"	"[K].aAQLGFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"596.87585"	"1192.74443"	"1192.74541"	"-0.82"	"-0.00049"	"6/58"	"6"	"58"	"15615774.1018066"	"HCD"	"MS2"	"25.1704"	"692.5"	"55.546"	"37.9454"	"9934"	"9934"	"9911"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1132.3"	""	"1015.5"	""	"1024.6"	""	"999.0"	"15.3"	"1157.2"	"1206.6"	""	"208"	"25"	"30.000"	"23.000"	"0.034997203215051"	"20"	"0.001966"	"0.02853"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"597.33331"	"1193.65935"	"1193.66003"	"-0.57"	"-0.00034"	"6/54"	"6"	"54"	"1654758.61352539"	"HCD"	"MS2"	"31.98392"	"139.3"	"100.000"	"27.9919"	"5913"	"5913"	"5884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"219.5"	""	"190.9"	""	"206.6"	""	"201.4"	""	"239.3"	"261.5"	""	"688"	"16"	"35.000"	"28.000"	"0.969523728354971"	"14"	"0.0004166"	"0.002105"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIDGFPR"	"[K].fLIDGFPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM73"	"UMP-CMP kinase OS=Rattus norvegicus OX=10116 GN=Cmpk1 PE=1 SV=2"	"Q4KM73"	"UMP-CMP kinase OS=Rattus norvegicus OX=10116 GN=Cmpk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"597.34729"	"1193.68730"	"1193.68801"	"-0.59"	"-0.00035"	"6/56"	"6"	"56"	"9085185.32366943"	"HCD"	"MS2"	"10.21898"	"382.4"	"100.000"	"61.4404"	"19541"	"19541"	"19523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"524.4"	""	"541.2"	""	"549.6"	""	"602.0"	""	"695.1"	"712.7"	""	"546"	"41"	"34.000"	"27.000"	"0.0021289362017285"	"19"	"0.0004166"	"0.002199"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIDGFPR"	"[K].fLIDGFPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM73"	"UMP-CMP kinase OS=Rattus norvegicus OX=10116 GN=Cmpk1 PE=1 SV=2"	"Q4KM73"	"UMP-CMP kinase OS=Rattus norvegicus OX=10116 GN=Cmpk1 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"597.34808"	"1193.68889"	"1193.68801"	"0.74"	"0.00044"	"6/56"	"6"	"56"	"10546235.3068848"	"HCD"	"MS2"	"7.670187"	"451.6"	"100.000"	"61.3116"	"19435"	"19435"	"19417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"639.0"	""	"633.4"	""	"645.5"	""	"707.9"	"1.9"	"795.4"	"854.4"	""	"517"	"41"	"34.000"	"27.000"	"0.00202050787486083"	"21"	"0.0003146"	"0.001428"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFPLLYR"	"[R].gVFPLLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"597.36578"	"1193.72429"	"1193.72440"	"-0.09"	"-0.00005"	"6/58"	"6"	"58"	"3084202.00933838"	"HCD"	"MS2"	"23.57046"	"155.9"	"100.000"	"58.7877"	"18459"	"18459"	"18437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"236.0"	""	"236.4"	""	"246.2"	""	"240.7"	""	"257.4"	"259.8"	""	"301"	"26"	"31.000"	"24.000"	"0.0391324014256373"	"20"	"0.0002277"	"0.001199"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFPLLYR"	"[R].gVFPLLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"597.36609"	"1193.72490"	"1193.72440"	"0.42"	"0.00025"	"6/58"	"6"	"58"	"3092515.76416016"	"HCD"	"MS2"	"7.188177"	"159.3"	"100.000"	"58.6818"	"18366"	"18366"	"18345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.7"	""	"238.5"	""	"233.6"	""	"259.5"	"0.6"	"256.4"	"265.5"	""	"299"	"24"	"31.000"	"24.000"	"0.0531668821260633"	"22"	"0.0001889"	"0.0009605"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"597.36792"	"1193.72856"	"1193.72943"	"-0.73"	"-0.00043"	"6/48"	"6"	"48"	"53507459.4567871"	"HCD"	"MS2"	"1.619728"	"924.9"	"22.940"	"38.1603"	"10066"	"10066"	"10049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1502.7"	""	"1376.8"	""	"1332.8"	""	"1389.9"	""	"1529.9"	"1622.5"	""	"289"	"37"	"31.000"	"24.000"	"0.00266604728071434"	""	"0.001966"	"0.02785"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"597.36804"	"1193.72881"	"1193.72943"	"-0.52"	"-0.00031"	"6/48"	"6"	"48"	"52893958.3881836"	"HCD"	"MS2"	"0.8204552"	"1037.5"	"24.716"	"38.0560"	"9979"	"9979"	"9959"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1711.3"	""	"1511.3"	""	"1495.8"	""	"1591.5"	""	"1666.0"	"1842.1"	""	"289"	"37"	"31.000"	"24.000"	"0.00270313569282858"	""	"0.001966"	"0.02908"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAADAIK"	"[K].fAADAIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"597.36908"	"1193.73088"	"1193.72943"	"1.22"	"0.00073"	"6/48"	"6"	"48"	"15221736.8982544"	"HCD"	"MS2"	"11.13384"	"1077.8"	"91.579"	"39.0706"	"10396"	"10396"	"10374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1650.6"	""	"1504.8"	""	"1488.3"	""	"1845.0"	""	"1814.4"	"1900.2"	""	"289"	"36"	"31.000"	"24.000"	"0.00357164138954831"	""	"0.001217"	"0.01641"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAADAIK"	"[K].fAADAIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"597.36926"	"1193.73125"	"1193.72943"	"1.52"	"0.00091"	"6/48"	"6"	"48"	"16192351.4372559"	"HCD"	"MS2"	"14.26191"	"1117.7"	"89.194"	"39.1798"	"10484"	"10484"	"10462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1710.2"	""	"1582.7"	""	"1518.4"	""	"1905.0"	""	"1880.9"	"1995.6"	""	"289"	"36"	"31.000"	"24.000"	"0.00353075714864279"	""	"0.001966"	"0.02837"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIMIGGK"	"[R].tImIGGk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"597.36945"	"1193.73161"	"1193.73280"	"-0.99"	"-0.00059"	"6/48"	"6"	"48"	"5431020.61431885"	"HCD"	"MS2"	"0"	"398.3"	"100.000"	"35.9140"	"9144"	"9144"	"9113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"726.7"	""	"533.0"	""	"546.6"	""	"414.4"	""	"709.2"	"847.4"	""	"281"	"4"	"31.000"	"24.000"	"5.87051665138503"	"15"	"0.008737"	"0.3864"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTSSLK"	"[R].tVTSSLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"597.37854"	"1193.74980"	"1193.75056"	"-0.63"	"-0.00038"	"7/56"	"7"	"56"	"745492.874511719"	"HCD"	"MS2"	"100"	"94.0"	"100.000"	"31.9471"	"7529"	"7529"	"7498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.3"	""	"128.3"	""	"136.1"	""	"143.4"	""	"173.2"	"179.8"	""	"143"	"5"	"28.000"	"21.000"	"2.3458813457588"	"17"	"0.002651"	"0.03943"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTSSLK"	"[R].tVTSSLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"597.37933"	"1193.75139"	"1193.75056"	"0.70"	"0.00042"	"6/56"	"6"	"56"	"17327611.8048096"	"HCD"	"MS2"	"40.14225"	"1251.1"	"100.000"	"31.3484"	"7283"	"7283"	"7264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1698.9"	""	"1899.9"	""	"1734.1"	""	"2060.2"	""	"2159.9"	"2303.1"	""	"143"	"38"	"28.000"	"21.000"	"0.00114632045434338"	"21"	"0.001846"	"0.02645"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTSSLK"	"[R].tVTSSLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"597.37946"	"1193.75163"	"1193.75056"	"0.90"	"0.00054"	"6/56"	"6"	"56"	"19884084.1966553"	"HCD"	"MS2"	"48.02728"	"1408.5"	"100.000"	"31.2450"	"7199"	"7199"	"7174"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1952.5"	""	"2136.7"	""	"1963.6"	""	"2258.2"	""	"2483.9"	"2550.9"	""	"141"	"38"	"28.000"	"21.000"	"0.00106952050905883"	""	"0.001966"	"0.02904"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTSSLK"	"[R].tVTSSLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"597.37994"	"1193.75261"	"1193.75056"	"1.72"	"0.00103"	"6/56"	"6"	"56"	"861412.535095215"	"HCD"	"MS2"	"0"	"101.9"	"100.000"	"31.8398"	"7443"	"7443"	"7414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.8"	""	"134.3"	""	"146.0"	""	"151.9"	"0.5"	"185.5"	"200.8"	""	"141"	"14"	"28.000"	"21.000"	"0.297296034917151"	"17"	"0.000523"	"0.003259"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"597.81964"	"1194.63201"	"1194.63162"	"0.32"	"0.00019"	"6/76"	"6"	"76"	"1566241.37469482"	"HCD"	"MS2"	"0"	"124.0"	"100.000"	"30.2939"	"6853"	"6853"	"6822"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.5"	""	"162.3"	""	"188.5"	""	"212.9"	"2.4"	"212.5"	"205.9"	""	"647"	"27"	"35.000"	"28.000"	"0.0688452981375408"	"20"	"0.0001308"	"0.000267"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMSNLSK"	"[K].gMSNLSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"597.84888"	"1194.69048"	"1194.69166"	"-0.99"	"-0.00059"	"6/60"	"6"	"60"	"1375517.11798096"	"HCD"	"MS2"	"0"	"150.2"	"100.000"	"31.0500"	"7161"	"7161"	"7136"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.5"	""	"170.5"	""	"182.2"	""	"235.7"	""	"327.1"	"318.9"	""	"543"	"13"	"34.000"	"27.000"	"1.46140245953172"	"16"	"0.0005564"	"0.003372"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGYANAK"	"[K].lGYANAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"P81795; C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3 PE=1 SV=2; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"597.86548"	"1194.72368"	"1194.72468"	"-0.84"	"-0.00050"	"6/54"	"6"	"54"	"3821430.5413208"	"HCD"	"MS2"	"5.216766"	"364.4"	"100.000"	"32.5875"	"7791"	"7791"	"7766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"563.8"	""	"464.3"	""	"516.5"	""	"560.3"	""	"684.3"	"663.7"	""	"256"	"32"	"31.000"	"24.000"	"0.00796544365016524"	"23"	"0.000523"	"0.003165"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGYANAK"	"[K].lGYANAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"P81795; C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3 PE=1 SV=2; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"597.86584"	"1194.72441"	"1194.72468"	"-0.22"	"-0.00013"	"6/54"	"6"	"54"	"3630052.98480225"	"HCD"	"MS2"	"8.405504"	"342.8"	"100.000"	"32.4624"	"7697"	"7697"	"7672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"501.6"	""	"448.1"	""	"482.6"	""	"533.7"	"0.5"	"632.3"	"649.1"	""	"262"	"35"	"31.000"	"24.000"	"0.00456321882697176"	"23"	"0.0004166"	"0.002423"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMFEVWR"	"[R].vMFEVWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q56A27"	"Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus OX=10116 GN=Ncbp1 PE=1 SV=1"	"Q56A27"	"Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus OX=10116 GN=Ncbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"598.32800"	"1195.64873"	"1195.64952"	"-0.66"	"-0.00039"	"5/48"	"5"	"48"	"2467955.95727539"	"HCD"	"MS2"	"33.44895"	"123.9"	"100.000"	"59.2653"	"18653"	"18653"	"18629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.8"	""	"167.4"	""	"196.4"	""	"184.0"	"1.0"	"228.2"	"229.7"	""	"596"	"10"	"34.000"	"27.000"	"3.31296054729914"	"19"	"0.00175"	"0.02375"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"598.34094"	"1195.67461"	"1195.67568"	"-0.90"	"-0.00054"	"5/52"	"5"	"52"	"798084.58770752"	"HCD"	"MS2"	"32.30019"	"55.2"	"100.000"	"24.8550"	"4640"	"4640"	"4610"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.9"	""	"64.6"	""	"81.1"	""	"129.4"	"1.6"	"89.4"	"88.0"	""	"500"	"18"	"33.000"	"26.000"	"0.403589639206621"	"22"	"0.005886"	"0.1919"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLCGTK"	"[K].lGLcGTk.[L]"	"N-Term(TMT6plex); C4(Methylthio); K7(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"598.35077"	"1195.69426"	"1195.69431"	"-0.04"	"-0.00002"	"6/48"	"6"	"48"	"5266551.02282715"	"HCD"	"MS2"	"37.03595"	"396.4"	"100.000"	"46.8293"	"13550"	"13550"	"13528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"590.6"	""	"565.9"	""	"553.8"	""	"584.9"	""	"749.4"	"712.5"	""	"390"	"26"	"32.000"	"25.000"	"0.0518841386660767"	"18"	"0.0006037"	"0.004913"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLCGTK"	"[K].lGLcGTk.[L]"	"N-Term(TMT6plex); C4(Methylthio); K7(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"3"	"598.35083"	"1195.69438"	"1195.69431"	"0.06"	"0.00004"	"3/48"	"3"	"48"	"3752005.94055176"	"HCD"	"MS2"	"61.87418"	"253.1"	"100.000"	"47.2609"	"13775"	"13775"	"13746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"362.3"	""	"338.3"	""	"357.7"	""	"379.7"	""	"487.0"	"475.9"	""	"393"	"6"	"32.000"	"25.000"	"4.7137066858733"	"15"	"0.001217"	"0.01763"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGLYGK"	"[R].sLGLYGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"598.37531"	"1195.74333"	"1195.74508"	"-1.46"	"-0.00087"	"6/48"	"6"	"48"	"27487782.8493652"	"HCD"	"MS2"	"3.808387"	"623.7"	"26.086"	"39.8008"	"10737"	"10737"	"10718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"818.3"	""	"858.8"	""	"865.0"	""	"967.9"	"0.4"	"1180.5"	"1222.3"	""	"163"	"34"	"29.000"	"22.000"	"0.00364047127603035"	""	"0.003507"	"0.07915"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGLYGK"	"[R].sLGLYGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"598.37543"	"1195.74358"	"1195.74508"	"-1.26"	"-0.00075"	"6/48"	"6"	"48"	"29979881.0371094"	"HCD"	"MS2"	"4.128179"	"537.1"	"20.761"	"39.6779"	"10646"	"10646"	"10630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"717.2"	""	"752.2"	""	"754.3"	""	"814.5"	"0.7"	"1001.5"	"1050.7"	""	"163"	"34"	"29.000"	"22.000"	"0.00341316755571103"	""	"0.003107"	"0.06282"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVLSSGK"	"[K].fVLSSGk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"399.25290"	"1195.74414"	"1195.74508"	"-0.78"	"-0.00031"	"8/50"	"8"	"50"	"3600545.33300781"	"HCD"	"MS2"	"6.577367"	"203.0"	"100.000"	"40.3411"	"10914"	"10914"	"10885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"288.3"	""	"266.2"	""	"328.6"	""	"309.3"	"1.2"	"353.6"	"374.7"	""	"161"	"22"	"29.000"	"22.000"	"0.0550548876061551"	"17"	"0.003137"	"0.06285"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVLSSGK"	"[K].fVLSSGk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"598.37573"	"1195.74419"	"1195.74508"	"-0.75"	"-0.00045"	"6/50"	"6"	"50"	"138585124.045898"	"HCD"	"MS2"	"3.044076"	"929.1"	"9.565"	"40.4230"	"10991"	"10991"	"10973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1422.1"	""	"1262.4"	""	"1382.0"	""	"1415.1"	"4.5"	"1630.0"	"1678.8"	""	"161"	"28"	"29.000"	"22.000"	"0.0121281868828033"	"18"	"0.007254"	"0.2699"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGLYGK"	"[R].sLGLYGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"598.37579"	"1195.74431"	"1195.74508"	"-0.64"	"-0.00039"	"6/48"	"6"	"48"	"41769295.6314087"	"HCD"	"MS2"	"9.100163"	"3296.1"	"100.000"	"39.4917"	"10612"	"10612"	"10590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4784.5"	""	"4783.8"	""	"4590.1"	""	"5201.4"	""	"5898.4"	"6179.4"	""	"161"	"34"	"29.000"	"22.000"	"0.00327186879977996"	""	"0.003137"	"0.06376"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVLSSGK"	"[K].fVLSSGk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"598.37610"	"1195.74492"	"1195.74508"	"-0.13"	"-0.00008"	"6/50"	"6"	"50"	"117214873.25293"	"HCD"	"MS2"	"2.662378"	"783.0"	"9.246"	"40.3115"	"10902"	"10902"	"10885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1153.2"	""	"1041.1"	""	"1163.1"	""	"1189.5"	""	"1382.4"	"1495.1"	""	"161"	"28"	"29.000"	"22.000"	"0.0120724629257941"	"18"	"0.006001"	"0.2087"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGLYGK"	"[R].sLGLYGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"598.37610"	"1195.74492"	"1195.74508"	"-0.13"	"-0.00008"	"6/48"	"6"	"48"	"4699155.10211182"	"HCD"	"MS2"	"19.98425"	"433.2"	"100.000"	"40.1208"	"10868"	"10868"	"10845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"576.2"	""	"584.0"	""	"610.7"	""	"667.9"	""	"845.4"	"828.1"	""	"161"	"38"	"29.000"	"22.000"	"0.0012554397647757"	""	"0.0006037"	"0.005489"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGLYGK"	"[R].sLGLYGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"598.37610"	"1195.74492"	"1195.74508"	"-0.13"	"-0.00008"	"6/48"	"6"	"48"	"38912536.9448242"	"HCD"	"MS2"	"4.335502"	"2982.5"	"85.575"	"39.3823"	"10524"	"10524"	"10502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4363.9"	""	"4262.1"	""	"4126.1"	""	"4680.5"	""	"5331.8"	"5687.5"	""	"161"	"32"	"29.000"	"22.000"	"0.00490677202278336"	""	"0.002711"	"0.04148"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGLYGK"	"[R].sLGLYGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"598.37616"	"1195.74504"	"1195.74508"	"-0.03"	"-0.00002"	"6/48"	"6"	"48"	"5103748.75549316"	"HCD"	"MS2"	"20.14642"	"472.8"	"100.000"	"40.0182"	"10782"	"10782"	"10757"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"653.4"	""	"597.0"	""	"663.2"	""	"761.3"	"1.2"	"915.8"	"890.2"	""	"161"	"29"	"29.000"	"22.000"	"0.00915789965087861"	""	"0.0006737"	"0.006702"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVLSSGK"	"[K].fVLSSGk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"598.37628"	"1195.74529"	"1195.74508"	"0.17"	"0.00010"	"6/50"	"6"	"50"	"5417578.73590088"	"HCD"	"MS2"	"0"	"443.8"	"100.000"	"40.7517"	"11126"	"11126"	"11101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"623.8"	""	"580.0"	""	"651.9"	""	"651.0"	"2.6"	"881.5"	"816.7"	""	"161"	"26"	"29.000"	"22.000"	"0.0209312844834804"	"22"	"0.0006737"	"0.006532"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVLSSGK"	"[K].fVLSSGk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"598.37634"	"1195.74541"	"1195.74508"	"0.27"	"0.00016"	"10/50"	"10"	"50"	"5294997.38787842"	"HCD"	"MS2"	"10.02117"	"459.3"	"100.000"	"40.6370"	"11035"	"11035"	"11013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"595.0"	""	"539.1"	""	"664.3"	""	"679.9"	"0.2"	"1027.4"	"855.4"	""	"161"	"25"	"29.000"	"22.000"	"0.0267790940401673"	""	"0.0006396"	"0.006318"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIISMFDR"	"[R].sIISMFDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"599.32813"	"1197.64897"	"1197.64991"	"-0.78"	"-0.00047"	"7/68"	"7"	"68"	"6659876.29431152"	"HCD"	"MS2"	"42.3932"	"311.8"	"100.000"	"56.1135"	"17370"	"17370"	"17349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"443.8"	""	"454.5"	""	"464.4"	""	"423.9"	""	"569.8"	"598.8"	""	"452"	"21"	"33.000"	"26.000"	"0.171438531956596"	"23"	"0.0003839"	"0.0018"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIISMFDR"	"[R].sIISMFDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"0"	"2"	"2"	"0.2812"	"0.0000"	"1"	"1"	"1"	"599.32819"	"1197.64910"	"1197.64991"	"-0.68"	"-0.00041"	"6/68"	"6"	"68"	"6036267.35150146"	"HCD"	"MS2"	"46.85997"	"389.5"	"100.000"	"55.6012"	"17107"	"17107"	"17083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"558.3"	""	"559.1"	""	"611.7"	""	"552.6"	"5.3"	"694.7"	"706.0"	""	"452"	"32"	"33.000"	"26.000"	"0.0140316401735994"	""	"0.0004557"	"0.002605"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIISMFDR"	"[R].sIISMFDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"0"	"2"	"2"	"0.2581"	"0.0000"	"1"	"1"	"1"	"599.32843"	"1197.64958"	"1197.64991"	"-0.27"	"-0.00016"	"5/68"	"5"	"68"	"6404338.03204346"	"HCD"	"MS2"	"50.11591"	"386.1"	"100.000"	"55.8142"	"17248"	"17248"	"17221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"537.7"	""	"560.8"	""	"578.5"	""	"575.7"	""	"698.5"	"705.9"	""	"450"	"31"	"33.000"	"26.000"	"0.0168726197099802"	""	"0.0004166"	"0.002106"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIISMFDR"	"[R].sIISMFDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"599.32874"	"1197.65019"	"1197.64991"	"0.24"	"0.00014"	"7/68"	"7"	"68"	"6705849.56884766"	"HCD"	"MS2"	"36.80478"	"341.3"	"100.000"	"55.9097"	"17233"	"17233"	"17211"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"519.9"	""	"477.9"	""	"516.9"	""	"460.4"	"3.7"	"628.2"	"625.4"	""	"439"	"19"	"33.000"	"26.000"	"0.286704509944939"	"23"	"0.001217"	"0.01644"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"399.88870"	"1197.65155"	"1197.65375"	"-1.83"	"-0.00073"	"5/82"	"5"	"82"	"2248078.8848877"	"HCD"	"MS2"	"68.67188"	"162.4"	"100.000"	"22.2929"	"3661"	"3661"	"3642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.2"	""	"239.7"	""	"214.0"	""	"251.1"	""	"325.2"	"280.4"	""	"439"	"21"	"33.000"	"26.000"	"0.165742743972563"	"23"	"0.0006037"	"0.003969"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"399.88882"	"1197.65192"	"1197.65375"	"-1.53"	"-0.00061"	"9/82"	"9"	"82"	"1940618.98712158"	"HCD"	"MS2"	"45.74439"	"159.2"	"100.000"	"22.3285"	"3641"	"3641"	"3625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.5"	""	"234.8"	""	"229.5"	""	"239.8"	""	"294.6"	"283.3"	""	"439"	"14"	"33.000"	"26.000"	"0.859873420251583"	"14"	"0.0006037"	"0.004066"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.33032"	"1197.65337"	"1197.65375"	"-0.32"	"-0.00019"	"5/82"	"5"	"82"	"197335.310791016"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"22.3142"	"3636"	"3636"	"3612"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.5"	""	"15.1"	""	"18.4"	""	"29.2"	"1.2"	"28.4"	"21.9"	""	"445"	"22"	"33.000"	"26.000"	"0.13910092414259"	"14"	"0.002297"	"0.03354"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGALTHK"	"[R].iGALTHk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"399.92828"	"1197.77030"	"1197.77196"	"-1.39"	"-0.00056"	"4/48"	"4"	"48"	"11120075.9879761"	"HCD"	"MS2"	"28.10977"	"470.3"	"82.836"	"31.6746"	"7375"	"7375"	"7350"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"706.3"	""	"637.7"	""	"766.7"	""	"725.9"	""	"785.0"	"828.5"	""	"110"	"18"	"27.000"	"20.000"	"0.0953592198764776"	""	"0.0005959"	"0.003673"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGALTHK"	"[R].iGALTHk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"O35952"	"Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hagh PE=1 SV=2"	"0"	"3"	"3"	"0.6190"	"0.0000"	"1"	"1"	"1"	"399.92859"	"1197.77121"	"1197.77196"	"-0.63"	"-0.00025"	"5/48"	"5"	"48"	"11279157.671814"	"HCD"	"MS2"	"24.38466"	"489.2"	"90.951"	"31.8143"	"7474"	"7474"	"7450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"714.4"	""	"673.5"	""	"802.5"	""	"723.6"	"0.2"	"829.3"	"885.3"	""	"104"	"21"	"27.000"	"20.000"	"0.0392647958386026"	""	"0.0003146"	"0.001431"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLNAIVIR"	"[K].gLLNAIVIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"599.39667"	"1197.78606"	"1197.78806"	"-1.67"	"-0.00100"	"6/76"	"6"	"76"	"4264149.33557129"	"HCD"	"MS2"	"10.42135"	"220.3"	"100.000"	"57.5580"	"17960"	"17960"	"17941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.1"	""	"284.8"	""	"352.8"	""	"369.5"	""	"389.7"	"406.4"	""	"75"	"34"	"25.000"	"18.000"	"0.00160336082306845"	"16"	"0.0001889"	"0.0003947"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLNAIVIR"	"[K].gLLNAIVIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"599.39691"	"1197.78655"	"1197.78806"	"-1.26"	"-0.00076"	"7/76"	"7"	"76"	"4198956.14282227"	"HCD"	"MS2"	"8.590634"	"218.9"	"100.000"	"57.3520"	"17822"	"17822"	"17803"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"277.1"	""	"284.3"	""	"344.2"	""	"342.8"	"0.1"	"417.9"	"408.7"	""	"77"	"42"	"25.000"	"18.000"	"0.000246865686985287"	"16"	"0.0001308"	"0.0002975"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLNAIVIR"	"[K].gLLNAIVIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"599.39752"	"1197.78777"	"1197.78806"	"-0.24"	"-0.00015"	"7/76"	"7"	"76"	"4378595.58154297"	"HCD"	"MS2"	"5.200659"	"197.0"	"100.000"	"57.2562"	"17837"	"17837"	"17813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"265.9"	""	"265.8"	""	"329.7"	""	"298.6"	""	"331.0"	"375.9"	""	"66"	"33"	"25.000"	"18.000"	"0.00185572637312815"	"16"	"0.0001889"	"0.0006796"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLNAIVIR"	"[K].gLLNAIVIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.39777"	"1197.78826"	"1197.78806"	"0.16"	"0.00010"	"7/76"	"7"	"76"	"3435259.74121094"	"HCD"	"MS2"	"41.2732"	"168.4"	"100.000"	"57.0271"	"17690"	"17690"	"17659"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.3"	""	"219.8"	""	"274.2"	""	"273.3"	""	"270.5"	"339.2"	""	"66"	"38"	"25.000"	"18.000"	"0.00051702785313569"	"15"	"0.0001889"	"0.0004084"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYSFGLGGR"	"[K].iYSFGLGGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O54861"	"Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3"	"O54861"	"Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"599.84222"	"1198.67717"	"1198.67817"	"-0.84"	"-0.00050"	"7/64"	"7"	"64"	"4692812.77386475"	"HCD"	"MS2"	"12.29821"	"275.8"	"100.000"	"48.1856"	"14105"	"14105"	"14080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"375.8"	""	"342.2"	""	"374.1"	""	"434.1"	"1.7"	"504.2"	"583.4"	""	"458"	"41"	"33.000"	"26.000"	"0.00168980068699564"	"16"	"0.0001308"	"0.0003065"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYSFGLGGR"	"[K].iYSFGLGGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O54861"	"Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3"	"O54861"	"Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.84259"	"1198.67790"	"1198.67817"	"-0.23"	"-0.00013"	"7/64"	"7"	"64"	"5498646.87078857"	"HCD"	"MS2"	"15.32157"	"313.0"	"100.000"	"48.4879"	"14276"	"14276"	"14255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"417.9"	""	"388.0"	""	"427.8"	""	"486.2"	"3.3"	"598.6"	"647.3"	""	"458"	"41"	"33.000"	"26.000"	"0.00167430850117703"	"15"	"0.0001308"	"0.000262"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVVFIAQR"	"[K].hVVFIAQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"0"	"2"	"2"	"0.0667"	"0.0000"	"1"	"1"	"1"	"599.86273"	"1198.71819"	"1198.72579"	"-6.34"	"-0.00380"	"6/60"	"6"	"60"	"1719048.47344971"	"HCD"	"MS2"	"0"	"135.2"	"100.000"	"29.7341"	"6582"	"6582"	"6556"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.3"	""	"146.4"	""	"168.5"	""	"283.5"	"2.9"	"262.0"	"264.2"	""	"312"	"15"	"31.000"	"24.000"	"0.467869352962074"	""	"0.001879"	"0.02684"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLAGVDR"	"[K].lLLLAGVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT2"	"Protein phosphatase methylesterase 1 OS=Rattus norvegicus OX=10116 GN=Ppme1 PE=1 SV=2"	"Q4FZT2"	"Protein phosphatase methylesterase 1 OS=Rattus norvegicus OX=10116 GN=Ppme1 PE=1 SV=2"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"599.88977"	"1198.77226"	"1198.77207"	"0.16"	"0.00010"	"12/64"	"12"	"64"	"3898310.14605713"	"HCD"	"MS2"	"9.610682"	"158.6"	"100.000"	"62.0287"	"19781"	"19781"	"19763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.6"	""	"216.3"	""	"244.1"	""	"257.6"	"0.8"	"273.4"	"297.4"	""	"129"	"47"	"28.000"	"21.000"	"0.000117100760248867"	""	"0.0001889"	"0.0009072"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLAGVDR"	"[K].lLLLAGVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT2"	"Protein phosphatase methylesterase 1 OS=Rattus norvegicus OX=10116 GN=Ppme1 PE=1 SV=2"	"Q4FZT2"	"Protein phosphatase methylesterase 1 OS=Rattus norvegicus OX=10116 GN=Ppme1 PE=1 SV=2"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"599.89008"	"1198.77287"	"1198.77207"	"0.67"	"0.00040"	"12/64"	"12"	"64"	"3809378.82977295"	"HCD"	"MS2"	"14.55313"	"157.5"	"100.000"	"61.8676"	"19662"	"19662"	"19641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.0"	""	"223.1"	""	"241.8"	""	"259.9"	""	"281.6"	"275.0"	""	"129"	"47"	"28.000"	"21.000"	"0.000116831435973964"	""	"0.0001889"	"0.001108"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWDIFFR"	"[K].sWDIFFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"600.32373"	"1199.64018"	"1199.64106"	"-0.73"	"-0.00044"	"4/52"	"4"	"52"	"9206958.21154785"	"HCD"	"MS2"	"20.99466"	"383.9"	"100.000"	"68.6518"	"22476"	"22476"	"22458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"495.7"	""	"488.9"	""	"494.4"	""	"729.0"	"2.1"	"705.2"	"723.6"	""	"528"	"22"	"34.000"	"27.000"	"0.166572738942771"	"19"	"0.001389"	"0.01915"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWDIFFR"	"[K].sWDIFFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"600.32391"	"1199.64055"	"1199.64106"	"-0.42"	"-0.00025"	"4/52"	"4"	"52"	"8572402.89331055"	"HCD"	"MS2"	"14.76851"	"381.2"	"100.000"	"68.7436"	"22462"	"22462"	"22442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"483.4"	""	"490.3"	""	"501.7"	""	"709.2"	""	"698.3"	"735.7"	""	"541"	"24"	"34.000"	"27.000"	"0.106946670728428"	"20"	"0.001783"	"0.02464"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEALAALLR"	"[R].nEALAALLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"600.36877"	"1199.73027"	"1199.73094"	"-0.55"	"-0.00033"	"7/80"	"7"	"80"	"9296886.54876709"	"HCD"	"MS2"	"4.610385"	"355.3"	"78.174"	"51.5731"	"15531"	"15531"	"15510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"483.8"	""	"485.7"	""	"521.9"	""	"579.1"	"0.5"	"638.2"	"656.4"	""	"297"	"42"	"31.000"	"24.000"	"0.000890689748239432"	""	"0.0001889"	"0.000765"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEALAALLR"	"[R].nEALAALLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"600.36902"	"1199.73076"	"1199.73094"	"-0.15"	"-0.00009"	"7/80"	"7"	"80"	"9268556.07556152"	"HCD"	"MS2"	"3.56076"	"449.9"	"99.380"	"51.3713"	"15398"	"15398"	"15378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"595.2"	""	"596.2"	""	"649.7"	""	"751.8"	""	"806.9"	"863.5"	""	"297"	"45"	"31.000"	"24.000"	"0.000473943371482463"	""	"0.0001889"	"0.0004645"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEALAALLR"	"[R].nEALAALLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"600.36914"	"1199.73100"	"1199.73094"	"0.06"	"0.00003"	"7/80"	"7"	"80"	"8520429.13873291"	"HCD"	"MS2"	"38.02044"	"388.0"	"100.000"	"51.2741"	"15409"	"15409"	"15382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"527.2"	""	"547.7"	""	"559.2"	""	"615.2"	""	"674.4"	"754.6"	""	"297"	"45"	"31.000"	"24.000"	"0.000499719680522604"	"23"	"0.0001889"	"0.0005235"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEALAALLR"	"[R].nEALAALLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"600.36920"	"1199.73113"	"1199.73094"	"0.16"	"0.00009"	"7/80"	"7"	"80"	"7137503.8494873"	"HCD"	"MS2"	"36.63457"	"332.4"	"100.000"	"51.0716"	"15276"	"15276"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"452.2"	""	"459.8"	""	"468.4"	""	"546.5"	""	"590.5"	"638.8"	""	"297"	"42"	"31.000"	"24.000"	"0.00102264866007125"	"23"	"0.0001889"	"0.0004227"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHAATTK"	"[K].lHAATTk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.37775"	"1199.74822"	"1199.75123"	"-2.51"	"-0.00151"	"3/50"	"3"	"50"	"327806.752746582"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"24.3956"	"4487"	"4487"	"4458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.0"	""	"39.2"	""	"47.9"	""	"47.5"	"0.5"	"46.7"	"48.9"	""	"289"	"11"	"31.000"	"24.000"	"1.0835971324854"	"13"	"0.003197"	"0.06754"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGYSSGK"	"[R].sGGYSSGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"600.83356"	"1200.65984"	"1200.66247"	"-2.19"	"-0.00132"	"9/66"	"9"	"66"	"310909.12902832"	"HCD"	"MS2"	"0"	"31.9"	"100.000"	"24.0819"	"4325"	"4325"	"4295"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.0"	""	"37.7"	""	"45.9"	""	"49.6"	"0.9"	"61.5"	"55.6"	""	"521"	"17"	"34.000"	"27.000"	"0.533098827866778"	"20"	"0.003698"	"0.08569"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALIQK"	"[K].vAALIQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"3"	"400.94012"	"1200.80582"	"1200.80801"	"-1.83"	"-0.00073"	"5/52"	"5"	"52"	"3713212.20727539"	"HCD"	"MS2"	"47.06147"	"202.4"	"100.000"	"42.4642"	"11825"	"11825"	"11795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.2"	""	"272.2"	""	"300.5"	""	"324.0"	"1.4"	"368.0"	"342.3"	""	"104"	"22"	"27.000"	"20.000"	"0.0323596148287963"	""	"0.003137"	"0.06287"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALIQK"	"[K].vAALIQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"600.90686"	"1200.80644"	"1200.80801"	"-1.31"	"-0.00079"	"6/52"	"6"	"52"	"14301086.4741821"	"HCD"	"MS2"	"14.71555"	"889.7"	"100.000"	"42.4436"	"11816"	"11816"	"11795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1492.2"	""	"1254.0"	""	"1381.7"	""	"1319.2"	"8.0"	"1440.1"	"1515.4"	""	"104"	"36"	"27.000"	"20.000"	"0.00145212279744342"	""	"0.00109"	"0.01474"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALIQK"	"[K].vAALIQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"3"	"3"	"0.4737"	"0.0000"	"1"	"1"	"3"	"400.94046"	"1200.80683"	"1200.80801"	"-0.99"	"-0.00040"	"5/52"	"5"	"52"	"2995077.52667236"	"HCD"	"MS2"	"47.70387"	"181.0"	"100.000"	"42.2833"	"11707"	"11707"	"11676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"273.1"	""	"229.3"	""	"258.2"	""	"311.1"	"0.9"	"336.4"	"304.8"	""	"103"	"19"	"27.000"	"20.000"	"0.0663448519121964"	""	"0.003107"	"0.05952"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALIQK"	"[K].vAALIQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"600.90723"	"1200.80718"	"1200.80801"	"-0.70"	"-0.00042"	"6/52"	"6"	"52"	"17541273.774292"	"HCD"	"MS2"	"2.691958"	"545.5"	"51.236"	"42.2164"	"11679"	"11679"	"11660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"921.4"	""	"772.2"	""	"826.5"	""	"827.0"	"3.4"	"886.4"	"920.4"	""	"98"	"37"	"26.000"	"19.000"	"0.000935828096697457"	""	"0.001966"	"0.0298"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIMTAGPR"	"[K].lNIMTAGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"601.34937"	"1201.69145"	"1201.69244"	"-0.82"	"-0.00049"	"7/78"	"7"	"78"	"15533805.6438599"	"HCD"	"MS2"	"0"	"640.7"	"80.083"	"39.8912"	"10730"	"10730"	"10709"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1168.5"	""	"951.4"	""	"873.8"	""	"738.5"	"3.4"	"1143.3"	"1184.1"	""	"707"	"52"	"35.000"	"28.000"	"0.000201553070251244"	"24"	"0.0001889"	"0.0004511"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIMTAGPR"	"[K].lNIMTAGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"601.34949"	"1201.69170"	"1201.69244"	"-0.62"	"-0.00037"	"7/78"	"7"	"78"	"14060661.56427"	"HCD"	"MS2"	"0"	"720.4"	"100.000"	"40.0026"	"10820"	"10820"	"10797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1271.1"	""	"1090.5"	""	"986.9"	""	"809.9"	"11.0"	"1277.6"	"1372.5"	""	"707"	"52"	"35.000"	"28.000"	"0.000200165588675023"	"23"	"0.0001889"	"0.0005358"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVSLTAGGR"	"[R].vLVSLTAGGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"601.37622"	"1201.74516"	"1201.74659"	"-1.18"	"-0.00071"	"8/76"	"8"	"76"	"13839882.7886353"	"HCD"	"MS2"	"28.62731"	"569.7"	"100.000"	"42.4971"	"11794"	"11794"	"11772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"585.3"	""	"800.1"	""	"911.8"	""	"922.5"	"1.2"	"1101.4"	"1081.0"	""	"517"	"57"	"34.000"	"27.000"	"4.74745161755548E-05"	""	"0"	"0.000112"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVSLTAGGR"	"[R].vLVSLTAGGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7455"	"0.0000"	"1"	"1"	"1"	"601.37659"	"1201.74590"	"1201.74659"	"-0.57"	"-0.00035"	"8/76"	"8"	"76"	"12100338.9932251"	"HCD"	"MS2"	"31.21068"	"522.2"	"100.000"	"42.7169"	"11928"	"11928"	"11907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"550.2"	""	"747.7"	""	"824.8"	""	"841.8"	""	"995.0"	"994.1"	""	"424"	"55"	"33.000"	"26.000"	"6.31445483038989E-05"	""	"0"	"0.0001622"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDPTK"	"[K].gIIDPTk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"601.38019"	"1201.75310"	"1201.75564"	"-2.12"	"-0.00127"	"9/52"	"9"	"52"	"10341353.8632202"	"HCD"	"MS2"	"0"	"803.0"	"100.000"	"36.5281"	"9396"	"9396"	"9369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1186.1"	""	"1127.7"	""	"1166.2"	""	"1338.5"	"33.6"	"1340.4"	"1405.9"	""	"424"	"28"	"33.000"	"26.000"	"0.0347805031918302"	"23"	"0.0008731"	"0.00853"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNINAAK"	"[R].lNINAAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"601.38647"	"1201.76567"	"1201.76688"	"-1.00"	"-0.00060"	"6/60"	"6"	"60"	"6371537.25360107"	"HCD"	"MS2"	"11.81663"	"510.1"	"100.000"	"36.3197"	"9267"	"9267"	"9242"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"686.1"	""	"488.3"	""	"536.2"	""	"652.8"	""	"745.1"	"1756.2"	""	"368"	"33"	"32.000"	"25.000"	"0.0101816420095695"	""	"0.0006037"	"0.004859"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDPTK"	"[K].gIIDPTk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"601.38672"	"1201.76616"	"1201.75564"	"8.75"	"0.00526"	"6/52"	"6"	"52"	"7657406.82873535"	"HCD"	"MS2"	"0"	"575.6"	"100.000"	"36.4457"	"9362"	"9362"	"9337"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"860.0"	""	"692.4"	""	"728.1"	""	"888.2"	""	"905.8"	"1383.8"	""	"368"	"40"	"32.000"	"25.000"	"0.00180641621515677"	"25"	"0.001686"	"0.02313"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLGLAGAK"	"[R].gGLGLAGAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"601.38678"	"1201.76628"	"1201.76688"	"-0.50"	"-0.00030"	"8/66"	"8"	"66"	"7849004.42260742"	"HCD"	"MS2"	"8.690385"	"579.0"	"100.000"	"35.5012"	"8931"	"8931"	"8907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"685.3"	""	"744.5"	""	"791.5"	""	"931.3"	"1.2"	"1117.9"	"1222.5"	""	"368"	"64"	"32.000"	"25.000"	"7.81299997661215E-06"	""	"0"	"0.0001749"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLGLAGAK"	"[R].gGLGLAGAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"601.38702"	"1201.76677"	"1201.76688"	"-0.09"	"-0.00005"	"8/66"	"8"	"66"	"7799339.5135498"	"HCD"	"MS2"	"29.86353"	"597.3"	"100.000"	"35.5497"	"8994"	"8994"	"8970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"676.2"	""	"775.3"	""	"816.8"	""	"922.6"	""	"1194.8"	"1288.1"	""	"373"	"61"	"32.000"	"25.000"	"1.39212693443477E-05"	""	"0"	"0.0001429"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAVLEK"	"[K].aLAVLEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"601.39862"	"1201.78996"	"1201.79203"	"-1.72"	"-0.00103"	"6/48"	"6"	"48"	"7402281.61132813"	"HCD"	"MS2"	"0"	"433.5"	"100.000"	"43.9009"	"12407"	"12407"	"12384"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"620.9"	""	"536.2"	""	"539.9"	""	"782.3"	""	"835.5"	"795.3"	""	"186"	"13"	"29.000"	"22.000"	"0.45759676818375"	"16"	"0.001217"	"0.01698"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAILAEK"	"[K].vAILAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"601.39899"	"1201.79070"	"1201.79203"	"-1.11"	"-0.00067"	"10/48"	"10"	"48"	"8747713.73126221"	"HCD"	"MS2"	"0"	"601.5"	"100.000"	"42.1938"	"11715"	"11715"	"11701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"893.3"	""	"805.5"	""	"779.8"	""	"958.6"	"5.4"	"1109.1"	"1147.6"	""	"184"	"27"	"29.000"	"22.000"	"0.0187407871148926"	"22"	"0.00103"	"0.01205"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAVLEK"	"[K].aLAVLEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.39911"	"1201.79094"	"1201.79203"	"-0.91"	"-0.00054"	"6/48"	"6"	"48"	"9228140.52801514"	"HCD"	"MS2"	"16.1326"	"472.1"	"100.000"	"43.6532"	"12257"	"12257"	"12237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"653.6"	""	"574.0"	""	"564.5"	""	"855.8"	""	"941.5"	"891.8"	""	"170"	"7"	"29.000"	"22.000"	"1.82986447451572"	"13"	"0.002953"	"0.05165"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAILAEK"	"[K].vAILAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"601.39923"	"1201.79119"	"1201.79203"	"-0.70"	"-0.00042"	"10/48"	"10"	"48"	"8556862.9788208"	"HCD"	"MS2"	"0"	"565.1"	"100.000"	"41.9668"	"11579"	"11579"	"11562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"806.0"	""	"774.8"	""	"746.4"	""	"900.6"	"0.9"	"1049.7"	"1077.4"	""	"170"	"28"	"29.000"	"22.000"	"0.0127473211017702"	"22"	"0.0006037"	"0.005974"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADLAK"	"[K].lLADLAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"601.39960"	"1201.79192"	"1201.79203"	"-0.09"	"-0.00006"	"6/48"	"6"	"48"	"3568852.15209961"	"HCD"	"MS2"	"52.12689"	"241.9"	"100.000"	"52.2411"	"15754"	"15754"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"319.0"	""	"307.3"	""	"335.2"	""	"407.4"	""	"478.5"	"447.3"	""	"170"	"32"	"29.000"	"22.000"	"0.00528955242393785"	""	"0.0006037"	"0.005981"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVALWDLR"	"[K].tVALWDLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"601.85779"	"1202.70830"	"1202.70947"	"-0.98"	"-0.00059"	"4/66"	"4"	"66"	"4219452.03912354"	"HCD"	"MS2"	"33.31625"	"185.6"	"100.000"	"54.3230"	"16638"	"16638"	"16621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"261.4"	""	"228.9"	""	"246.8"	""	"292.8"	""	"348.4"	"381.1"	""	"843"	"22"	"36.000"	"29.000"	"0.248197600732381"	"29"	"0.0002277"	"0.001353"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVALWDLR"	"[K].tVALWDLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"601.85797"	"1202.70867"	"1202.70947"	"-0.67"	"-0.00040"	"6/66"	"6"	"66"	"3551744.69140625"	"HCD"	"MS2"	"16.49806"	"145.1"	"100.000"	"54.1922"	"16531"	"16531"	"16509"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.0"	""	"181.3"	""	"197.1"	""	"250.4"	"0.9"	"275.9"	"291.3"	""	"801"	"23"	"36.000"	"29.000"	"0.190810610215569"	"25"	"0.0001889"	"0.0009096"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWWLDLK"	"[R].LWWLDLk.[S]"	"K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"601.85956"	"1202.71184"	"1202.71350"	"-1.38"	"-0.00083"	"5/48"	"5"	"48"	"1090891.40905762"	"HCD"	"MS2"	"27.53269"	"54.2"	"100.000"	"73.8444"	"24596"	"24596"	"24575"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.3"	""	"90.0"	""	"68.0"	""	"87.4"	""	"100.6"	"93.3"	""	"792"	"31"	"35.000"	"28.000"	"0.0306686871929798"	""	"0.005072"	"0.1525"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPVGYGIR"	"[K].lVPVGYGIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"601.87585"	"1202.74443"	"1202.74586"	"-1.19"	"-0.00071"	"6/66"	"6"	"66"	"6434772.82495117"	"HCD"	"MS2"	"26.70568"	"336.7"	"100.000"	"45.7944"	"13177"	"13177"	"13160"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"456.0"	""	"445.9"	""	"485.1"	""	"542.6"	""	"602.3"	"660.2"	""	"475"	"32"	"33.000"	"26.000"	"0.0162803453782507"	"17"	"0.0001889"	"0.0005491"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPVGYGIR"	"[K].lVPVGYGIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"601.87598"	"1202.74468"	"1202.74586"	"-0.98"	"-0.00059"	"6/66"	"6"	"66"	"6656828.93841553"	"HCD"	"MS2"	"0"	"336.3"	"100.000"	"45.5602"	"13031"	"13031"	"13020"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"473.5"	""	"464.6"	""	"471.4"	""	"529.0"	"1.4"	"597.3"	"648.6"	""	"475"	"35"	"33.000"	"26.000"	"0.00804754870830606"	"18"	"0.0001889"	"0.0004029"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEVLNK"	"[K].aAEVLNk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"601.87842"	"1202.74956"	"1202.75089"	"-1.11"	"-0.00067"	"6/50"	"6"	"50"	"2510045.63110352"	"HCD"	"MS2"	"0"	"244.7"	"100.000"	"33.6464"	"8218"	"8218"	"8196"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.6"	""	"286.7"	""	"298.9"	""	"418.4"	""	"519.3"	"526.9"	""	"456"	"15"	"33.000"	"26.000"	"0.686965373514435"	"25"	"0.0008125"	"0.007784"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGTTSR"	"[K].lLIIGTTSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"601.88708"	"1202.76689"	"1202.76699"	"-0.08"	"-0.00005"	"6/68"	"6"	"68"	"3834481.70983887"	"HCD"	"MS2"	"35.80943"	"281.2"	"100.000"	"47.7237"	"13964"	"13964"	"13938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.7"	""	"362.0"	""	"410.6"	""	"433.4"	""	"540.0"	"554.1"	""	"307"	"16"	"31.000"	"24.000"	"0.351648184699853"	""	"0.0006037"	"0.004278"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATALQK"	"[R].lATALQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"P09495; Q63610; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"401.59991"	"1202.78519"	"1202.78728"	"-1.74"	"-0.00070"	"5/50"	"5"	"50"	"13944517.5606079"	"HCD"	"MS2"	"4.652213"	"659.9"	"100.000"	"38.2678"	"10110"	"10110"	"10081"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"852.2"	""	"858.4"	""	"924.6"	""	"1175.7"	""	"1140.1"	"1303.3"	""	"208"	"30"	"30.000"	"23.000"	"0.0103046522268848"	""	"0.001718"	"0.02372"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATALQK"	"[R].lATALQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"P09495; Q63610; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"3"	"3"	"0.3478"	"0.0000"	"1"	"1"	"1"	"401.60007"	"1202.78565"	"1202.78728"	"-1.36"	"-0.00054"	"5/50"	"5"	"50"	"13769746.8905029"	"HCD"	"MS2"	"16.73029"	"696.9"	"100.000"	"38.1588"	"10022"	"10022"	"9991"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"856.5"	""	"949.8"	""	"979.0"	""	"1225.5"	""	"1257.9"	"1341.7"	""	"208"	"23"	"30.000"	"23.000"	"0.0537073024042954"	""	"0.002953"	"0.0527"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATALQK"	"[R].lATALQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"P09495; Q63610; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"601.89661"	"1202.78594"	"1202.78728"	"-1.12"	"-0.00067"	"6/50"	"6"	"50"	"38703975.2938232"	"HCD"	"MS2"	"36.78164"	"2903.4"	"100.000"	"38.0949"	"9995"	"9995"	"9975"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3815.1"	""	"3833.4"	""	"3999.8"	""	"5383.7"	""	"5065.8"	"5607.8"	""	"208"	"36"	"30.000"	"23.000"	"0.00238250235887848"	""	"0.001686"	"0.02283"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATALQK"	"[R].lATALQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"P09495; Q63610; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"601.89673"	"1202.78618"	"1202.78728"	"-0.91"	"-0.00055"	"6/50"	"6"	"50"	"56814828.7139893"	"HCD"	"MS2"	"22.46318"	"1998.2"	"48.801"	"38.2037"	"10083"	"10083"	"10065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2601.7"	""	"2629.7"	""	"2767.7"	""	"3668.0"	""	"3454.7"	"3826.4"	""	"180"	"37"	"29.000"	"22.000"	"0.00198263381674811"	""	"0.001966"	"0.02898"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVESVPK"	"[K].sVESVPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"602.36969"	"1203.73210"	"1203.73491"	"-2.33"	"-0.00140"	"6/54"	"6"	"54"	"1199863.59338379"	"HCD"	"MS2"	"0"	"105.4"	"100.000"	"30.3214"	"6864"	"6864"	"6838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.7"	""	"143.6"	""	"151.6"	""	"175.6"	""	"192.9"	"179.2"	""	"588"	"28"	"34.000"	"27.000"	"0.0416243371307382"	"23"	"0.000523"	"0.003004"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LETPSAK"	"[R].lETPSAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"602.37036"	"1203.73345"	"1203.73491"	"-1.22"	"-0.00073"	"10/54"	"10"	"54"	"1538590.09710693"	"HCD"	"MS2"	"20.66075"	"136.4"	"100.000"	"31.6402"	"7361"	"7361"	"7334"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.7"	""	"179.9"	""	"194.4"	""	"191.8"	"0.4"	"244.0"	"246.5"	""	"565"	"25"	"34.000"	"27.000"	"0.0903687868487821"	""	"0.001058"	"0.01313"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LETPSAK"	"[R].lETPSAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"1"	"602.37134"	"1203.73540"	"1203.73491"	"0.41"	"0.00024"	"4/54"	"4"	"54"	"1444340.8782959"	"HCD"	"MS2"	"0"	"130.4"	"100.000"	"31.7800"	"7460"	"7460"	"7434"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.3"	""	"163.9"	""	"189.1"	""	"189.7"	"0.9"	"237.0"	"237.8"	""	"540"	"22"	"34.000"	"27.000"	"0.173525683675595"	""	"0.00103"	"0.01271"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALFAVPK"	"[K].aLFAVPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"602.39673"	"1203.78618"	"1203.78655"	"-0.31"	"-0.00019"	"10/50"	"10"	"50"	"5238172.98718262"	"HCD"	"MS2"	"0"	"354.1"	"100.000"	"48.0640"	"14055"	"14055"	"14037"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.6"	""	"412.6"	""	"433.9"	""	"654.9"	""	"712.9"	"714.8"	""	"180"	"19"	"29.000"	"22.000"	"0.121406659433249"	"16"	"0.001587"	"0.0213"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALFAVPK"	"[K].aLFAVPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"602.39673"	"1203.78618"	"1203.78655"	"-0.31"	"-0.00019"	"6/50"	"6"	"50"	"5813635.63995361"	"HCD"	"MS2"	"6.095979"	"379.7"	"100.000"	"48.4145"	"14246"	"14246"	"14226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"463.1"	""	"436.6"	""	"462.1"	""	"710.3"	"2.8"	"773.1"	"756.9"	""	"180"	"37"	"29.000"	"22.000"	"0.00199178523864508"	"17"	"0.0006037"	"0.004781"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLATLK"	"[K].vTLATLk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"602.40680"	"1203.80632"	"1203.80768"	"-1.13"	"-0.00068"	"12/54"	"12"	"54"	"10652505.7203369"	"HCD"	"MS2"	"0"	"798.9"	"100.000"	"42.9828"	"11991"	"11991"	"11975"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1042.7"	""	"1073.2"	""	"1064.6"	""	"1492.7"	""	"1450.4"	"1454.7"	""	"85"	"39"	"26.000"	"19.000"	"0.00053751294767524"	""	"0.0008731"	"0.008436"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLATLK"	"[K].vTLATLk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"602.40759"	"1203.80791"	"1203.80768"	"0.19"	"0.00011"	"12/54"	"12"	"54"	"21861797.1956787"	"HCD"	"MS2"	"21.60106"	"610.7"	"38.834"	"43.2919"	"12162"	"12162"	"12155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"792.3"	""	"807.7"	""	"778.2"	""	"1167.5"	""	"1120.5"	"1128.8"	""	"46"	"36"	"23.000"	"16.000"	"0.000629111807050544"	""	"0.002829"	"0.04825"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAVITK"	"[R].tLAVITk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"602.40778"	"1203.80828"	"1203.80768"	"0.49"	"0.00030"	"12/58"	"12"	"58"	"6848048.46154785"	"HCD"	"MS2"	"7.604939"	"502.6"	"100.000"	"40.6025"	"11065"	"11065"	"11037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"684.8"	""	"710.0"	""	"741.5"	""	"800.2"	"4.4"	"910.2"	"909.9"	""	"46"	"39"	"23.000"	"16.000"	"0.00029835123232631"	""	"0.001007"	"0.01106"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAVITK"	"[R].tLAVITk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"602.40790"	"1203.80852"	"1203.80768"	"0.70"	"0.00042"	"6/58"	"6"	"58"	"8353028.78204346"	"HCD"	"MS2"	"12.01066"	"592.5"	"100.000"	"40.4535"	"10960"	"10960"	"10933"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"848.2"	""	"796.6"	""	"835.4"	""	"986.9"	"2.1"	"1075.4"	"1066.9"	""	"46"	"35"	"23.000"	"16.000"	"0.000661801635389205"	"15"	"0.001557"	"0.02081"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQVDGK"	"[R].sIQVDGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"602.86877"	"1204.73027"	"1204.73016"	"0.09"	"0.00006"	"6/64"	"6"	"64"	"3658055.3961792"	"HCD"	"MS2"	"0"	"309.0"	"100.000"	"32.5231"	"7765"	"7765"	"7734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"403.3"	""	"359.6"	""	"375.5"	""	"518.5"	""	"642.2"	"639.6"	""	"458"	"34"	"33.000"	"26.000"	"0.00981376111710136"	"21"	"0.0004166"	"0.002268"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQVDGK"	"[R].sIQVDGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"602.86957"	"1204.73186"	"1204.73016"	"1.41"	"0.00085"	"6/64"	"6"	"64"	"2992687.95898438"	"HCD"	"MS2"	"23.74434"	"269.9"	"100.000"	"32.3982"	"7671"	"7671"	"7640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.4"	""	"321.5"	""	"305.6"	""	"468.9"	""	"568.7"	"538.9"	""	"456"	"36"	"33.000"	"26.000"	"0.00583357582214486"	"19"	"0.0004166"	"0.002401"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVAAASK"	"[R].iSVAAASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"602.88617"	"1204.76506"	"1204.76654"	"-1.23"	"-0.00074"	"7/66"	"7"	"66"	"4690736.48345947"	"HCD"	"MS2"	"0"	"358.3"	"100.000"	"33.7770"	"8228"	"8228"	"8204"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"475.0"	""	"451.1"	""	"475.2"	""	"545.9"	"11.7"	"800.0"	"642.8"	""	"261"	"47"	"31.000"	"24.000"	"0.000288144617658966"	""	"0.0001889"	"0.0009963"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVAAASK"	"[R].iSVAAASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"602.88666"	"1204.76604"	"1204.76654"	"-0.42"	"-0.00025"	"11/66"	"11"	"66"	"4768208.96807861"	"HCD"	"MS2"	"0"	"357.5"	"100.000"	"33.8549"	"8303"	"8303"	"8282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"474.9"	""	"461.6"	""	"480.4"	""	"526.9"	"7.5"	"809.7"	"633.1"	""	"217"	"38"	"30.000"	"23.000"	"0.00184684198160852"	""	"0.0001889"	"0.000904"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLVQTK"	"[K].gTLVQTk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"D3ZBN0; P15865"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1;Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D4A3K5; D3ZBN0; P15865"	"Histone H1.1 OS=Rattus norvegicus OX=10116 GN=Hist1h1a PE=1 SV=1; Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"602.88666"	"1204.76604"	"1204.76654"	"-0.42"	"-0.00025"	"12/60"	"12"	"60"	"6863292.16107178"	"HCD"	"MS2"	"0"	"485.1"	"100.000"	"30.6927"	"7016"	"7016"	"6992"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"719.1"	""	"845.6"	""	"1002.1"	""	"632.9"	""	"836.7"	"543.3"	""	"217"	"40"	"30.000"	"23.000"	"0.000973710242033313"	"15"	"0.0007076"	"0.006916"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLVQTK"	"[K].gTLVQTk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"D3ZBN0; P15865"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1;Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D4A3K5; D3ZBN0; P15865"	"Histone H1.1 OS=Rattus norvegicus OX=10116 GN=Hist1h1a PE=1 SV=1; Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"602.88678"	"1204.76628"	"1204.76654"	"-0.22"	"-0.00013"	"12/60"	"12"	"60"	"5992541.72613525"	"HCD"	"MS2"	"12.65235"	"413.4"	"100.000"	"30.5894"	"6933"	"6933"	"6904"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"607.2"	""	"701.3"	""	"880.0"	""	"533.8"	"3.5"	"718.1"	"458.5"	""	"217"	"41"	"30.000"	"23.000"	"0.000964783212875875"	"15"	"0.0005564"	"0.003646"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"603.30792"	"1205.60857"	"1205.61122"	"-2.20"	"-0.00132"	"7/74"	"7"	"74"	"3461462.01422119"	"HCD"	"MS2"	"0"	"184.8"	"100.000"	"28.6441"	"6159"	"6159"	"6148"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.2"	""	"246.4"	""	"247.1"	""	"287.5"	""	"339.1"	"382.3"	""	"554"	"51"	"34.000"	"27.000"	"0.000203460341479521"	"27"	"0"	"0.0001042"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"603.30914"	"1205.61101"	"1205.61122"	"-0.17"	"-0.00010"	"7/74"	"7"	"74"	"5355895.9263916"	"HCD"	"MS2"	"0"	"288.8"	"100.000"	"28.6626"	"6209"	"6209"	"6203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"430.0"	""	"390.5"	""	"388.2"	""	"409.5"	""	"536.5"	"588.8"	""	"559"	"49"	"34.000"	"27.000"	"0.000334488978500375"	"25"	"0"	"8.701E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"603.34772"	"1205.68816"	"1205.68902"	"-0.72"	"-0.00043"	"7/70"	"7"	"70"	"2500004.76507568"	"HCD"	"MS2"	"5.69886"	"196.3"	"100.000"	"24.1874"	"4368"	"4368"	"4342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.2"	""	"217.1"	""	"269.3"	""	"348.3"	""	"388.4"	"369.7"	""	"737"	"40"	"35.000"	"28.000"	"0.00347886432911363"	""	"0.0001859"	"0.0003326"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"603.34814"	"1205.68901"	"1205.68902"	"-0.01"	"0.00000"	"7/70"	"7"	"70"	"2486047.95904541"	"HCD"	"MS2"	"0"	"205.4"	"100.000"	"24.2351"	"4421"	"4421"	"4397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.0"	""	"220.6"	""	"258.6"	""	"371.1"	"1.4"	"401.1"	"409.2"	""	"749"	"37"	"35.000"	"28.000"	"0.0067523014395191"	"28"	"0.0001859"	"0.0003237"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"603.35742"	"1205.70757"	"1205.71417"	"-5.48"	"-0.00330"	"6/54"	"6"	"54"	"5644665.74163818"	"HCD"	"MS2"	"27.38194"	"425.9"	"100.000"	"33.3287"	"8049"	"8049"	"8039"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"384.4"	""	"403.2"	""	"437.6"	""	"991.7"	""	"913.2"	"931.1"	""	"668"	"22"	"35.000"	"28.000"	"0.226332263541966"	"24"	"0.0007076"	"0.006975"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"603.35828"	"1205.70928"	"1205.71417"	"-4.06"	"-0.00245"	"6/54"	"6"	"54"	"3357386.75787354"	"HCD"	"MS2"	"0"	"306.3"	"100.000"	"33.4585"	"8143"	"8143"	"8126"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.0"	""	"292.6"	""	"332.9"	""	"626.0"	""	"703.2"	"670.0"	""	"655"	"15"	"35.000"	"28.000"	"1.03564593370514"	"21"	"0.0006037"	"0.005146"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"603.35999"	"1205.71269"	"1205.71417"	"-1.23"	"-0.00074"	"6/54"	"6"	"54"	"21711927.5722656"	"HCD"	"MS2"	"0"	"568.1"	"33.969"	"33.1129"	"8007"	"8007"	"7990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"362.9"	""	"340.6"	""	"451.9"	""	"1314.1"	""	"1507.8"	"1449.5"	""	"644"	"35"	"35.000"	"28.000"	"0.00918027882136257"	""	"0.0009404"	"0.009839"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"603.36011"	"1205.71294"	"1205.71417"	"-1.02"	"-0.00062"	"5/54"	"5"	"54"	"2041074.69659424"	"HCD"	"MS2"	"0"	"198.1"	"100.000"	"33.6257"	"8166"	"8166"	"8147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.3"	""	"183.0"	""	"194.3"	""	"397.9"	""	"473.1"	"455.8"	""	"622"	"25"	"34.000"	"27.000"	"0.0896933797472374"	""	"0.0003146"	"0.001443"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"603.36029"	"1205.71330"	"1205.71417"	"-0.72"	"-0.00043"	"6/54"	"6"	"54"	"38222799.041626"	"HCD"	"MS2"	"18.11658"	"2485.6"	"100.000"	"32.7284"	"7806"	"7806"	"7784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1869.9"	""	"1572.9"	""	"1956.4"	""	"6101.8"	""	"6427.4"	"6006.4"	""	"612"	"37"	"34.000"	"27.000"	"0.00636387186253731"	""	"0.001454"	"0.01974"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"603.36035"	"1205.71343"	"1205.71417"	"-0.62"	"-0.00037"	"6/54"	"6"	"54"	"25572345.4348145"	"HCD"	"MS2"	"0"	"483.6"	"24.616"	"33.0266"	"7929"	"7929"	"7912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"316.9"	""	"311.0"	""	"377.7"	""	"1115.1"	""	"1265.6"	"1237.1"	""	"612"	"37"	"34.000"	"27.000"	"0.00627655626720623"	""	"0.001217"	"0.01849"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"402.57602"	"1205.71350"	"1205.71417"	"-0.56"	"-0.00022"	"9/54"	"9"	"54"	"6157381.3883667"	"HCD"	"MS2"	"14.42461"	"367.0"	"100.000"	"32.8498"	"7856"	"7856"	"7832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.2"	""	"315.7"	""	"381.0"	""	"753.8"	""	"904.4"	"841.3"	""	"612"	"18"	"34.000"	"27.000"	"0.468512763274702"	"24"	"0.001389"	"0.01911"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.4118"	"0.0000"	"1"	"1"	"1"	"402.57605"	"1205.71360"	"1205.71417"	"-0.48"	"-0.00019"	"8/54"	"8"	"54"	"6473796.06555176"	"HCD"	"MS2"	"13.04028"	"364.8"	"100.000"	"32.9453"	"7938"	"7938"	"7910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"317.8"	""	"321.9"	""	"365.7"	""	"757.9"	""	"880.9"	"834.8"	""	"612"	"17"	"34.000"	"27.000"	"0.569798663818838"	"23"	"0.001718"	"0.02357"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"603.36053"	"1205.71379"	"1205.71417"	"-0.32"	"-0.00019"	"6/54"	"6"	"54"	"32192601.4105225"	"HCD"	"MS2"	"8.458882"	"2266.7"	"100.000"	"32.8056"	"7880"	"7880"	"7862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1640.8"	""	"1444.8"	""	"1815.5"	""	"5588.9"	""	"5853.2"	"5484.8"	""	"612"	"37"	"34.000"	"27.000"	"0.00660269789200717"	""	"0.0009404"	"0.009933"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILGGTVFR"	"[R].nILGGTVFR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P56574; P41562"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2;Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P56574; P41562"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"603.36279"	"1205.71831"	"1205.72037"	"-1.71"	"-0.00103"	"7/80"	"7"	"80"	"14789838.5908813"	"HCD"	"MS2"	"20.13764"	"689.9"	"100.000"	"46.3531"	"13355"	"13355"	"13336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1003.3"	""	"992.1"	""	"1063.1"	""	"1069.5"	""	"1166.2"	"1237.4"	""	"550"	"42"	"34.000"	"27.000"	"0.00172716048673662"	"23"	"0.0001889"	"0.0005599"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILGGTVFR"	"[R].nILGGTVFR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P56574; P41562"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2;Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P56574; P41562"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"603.36322"	"1205.71916"	"1205.72037"	"-1.00"	"-0.00060"	"7/80"	"7"	"80"	"14772332.3186035"	"HCD"	"MS2"	"17.71492"	"676.7"	"100.000"	"46.6196"	"13512"	"13512"	"13490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"968.4"	""	"1019.3"	""	"1064.1"	""	"1055.8"	""	"1110.8"	"1190.4"	""	"547"	"40"	"34.000"	"27.000"	"0.00251742957874493"	"23"	"0.0001889"	"0.0004443"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILGGTVFR"	"[R].nILGGTVFR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P56574; P41562"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2;Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P56574; P41562"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"603.36371"	"1205.72014"	"1205.72037"	"-0.19"	"-0.00012"	"7/80"	"7"	"80"	"50423282.1643066"	"HCD"	"MS2"	"0"	"372.2"	"17.936"	"46.9227"	"13636"	"13636"	"13618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"563.3"	""	"558.3"	""	"564.3"	""	"517.6"	""	"630.8"	"691.0"	""	"525"	"43"	"34.000"	"27.000"	"0.00128271244327494"	""	"0.0001889"	"0.0008061"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILGGTVFR"	"[R].nILGGTVFR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P56574; P41562"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2;Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P56574; P41562"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"603.36414"	"1205.72099"	"1205.72037"	"0.52"	"0.00031"	"13/80"	"13"	"80"	"44064766.5739746"	"HCD"	"MS2"	"0.4532983"	"484.2"	"25.475"	"46.6588"	"13481"	"13481"	"13464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"709.9"	""	"699.3"	""	"762.9"	""	"716.4"	"0.8"	"813.8"	"878.5"	""	"523"	"44"	"34.000"	"27.000"	"0.00110273635646574"	""	"0.0001889"	"0.0009808"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"603.37146"	"1205.73564"	"1205.71417"	"17.81"	"0.01073"	"5/54"	"5"	"54"	"3907523.85437012"	"HCD"	"MS2"	"100"	"330.8"	"100.000"	"33.4333"	"8133"	"8133"	"8116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"306.0"	""	"332.5"	""	"318.6"	""	"729.0"	""	"743.1"	"725.6"	""	"450"	"14"	"33.000"	"26.000"	"0.822588281129531"	"18"	"0.007472"	"0.2856"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"603.37775"	"1205.74822"	"1205.75056"	"-1.94"	"-0.00117"	"10/54"	"10"	"54"	"3871330.74078369"	"HCD"	"MS2"	"0"	"361.1"	"100.000"	"35.4370"	"8905"	"8905"	"8875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"394.0"	""	"393.1"	""	"445.1"	""	"518.3"	""	"1032.9"	"658.3"	""	"335"	"27"	"32.000"	"25.000"	"0.0331142414718736"	""	"0.0006037"	"0.004559"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"603.37781"	"1205.74834"	"1205.75056"	"-1.84"	"-0.00111"	"6/54"	"6"	"54"	"40481106.645752"	"HCD"	"MS2"	"9.159999"	"1813.1"	"64.919"	"34.1114"	"8406"	"8406"	"8388"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3232.5"	""	"3180.5"	""	"2320.5"	""	"2806.0"	""	"3040.0"	"2560.3"	""	"335"	"38"	"32.000"	"25.000"	"0.00254691711230193"	""	"0.001158"	"0.01538"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPTISK"	"[K].tTPTISk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"603.37805"	"1205.74883"	"1205.75056"	"-1.44"	"-0.00087"	"4/58"	"4"	"58"	"1196819.04022217"	"HCD"	"MS2"	"0"	"111.6"	"100.000"	"31.1740"	"7170"	"7170"	"7142"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.2"	""	"133.8"	""	"134.5"	""	"225.5"	""	"242.6"	"217.1"	""	"336"	"15"	"32.000"	"25.000"	"0.59471553302017"	"16"	"0.003045"	"0.05848"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"603.37817"	"1205.74907"	"1205.75056"	"-1.23"	"-0.00074"	"12/54"	"12"	"54"	"81346784.0483398"	"HCD"	"MS2"	"0.7064684"	"591.8"	"10.168"	"34.3319"	"8452"	"8452"	"8435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1029.2"	""	"981.7"	""	"774.9"	""	"837.3"	""	"1058.8"	"916.7"	""	"344"	"43"	"32.000"	"25.000"	"0.000798966273383129"	""	"0.00252"	"0.03792"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"402.58795"	"1205.74930"	"1205.75056"	"-1.04"	"-0.00042"	"5/54"	"5"	"54"	"11324430.0278931"	"HCD"	"MS2"	"7.040108"	"717.6"	"100.000"	"34.2054"	"8443"	"8443"	"8428"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1206.4"	""	"1220.1"	""	"916.3"	""	"1107.0"	""	"1263.0"	"1074.1"	""	"341"	"33"	"32.000"	"25.000"	"0.00788359641485739"	"25"	"0.002981"	"0.0544"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"603.37854"	"1205.74980"	"1205.75056"	"-0.63"	"-0.00038"	"6/54"	"6"	"54"	"31385148.5322266"	"HCD"	"MS2"	"1.229246"	"1280.3"	"57.852"	"34.0519"	"8338"	"8338"	"8332"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2243.1"	""	"2275.0"	""	"1596.7"	""	"1946.3"	""	"2194.0"	"1848.4"	""	"310"	"40"	"31.000"	"24.000"	"0.00161187625703504"	""	"0.001058"	"0.01339"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"603.37866"	"1205.75005"	"1205.75056"	"-0.42"	"-0.00026"	"12/54"	"12"	"54"	"59634298.4716797"	"HCD"	"MS2"	"1.514644"	"502.3"	"12.424"	"34.4005"	"8523"	"8523"	"8508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"847.4"	""	"832.7"	""	"652.0"	""	"760.9"	""	"890.7"	"767.2"	""	"310"	"43"	"31.000"	"24.000"	"0.000723322039487147"	""	"0.002711"	"0.04051"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"603.37897"	"1205.75066"	"1205.75056"	"0.08"	"0.00005"	"6/54"	"6"	"54"	"4413842.53411865"	"HCD"	"MS2"	"2.629809"	"352.0"	"100.000"	"34.7353"	"8660"	"8660"	"8634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"538.3"	""	"551.1"	""	"446.6"	""	"569.7"	""	"652.6"	"578.7"	""	"310"	"38"	"31.000"	"24.000"	"0.00257235970652822"	""	"0.0006037"	"0.00455"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"603.37897"	"1205.75066"	"1205.75056"	"0.08"	"0.00005"	"6/54"	"6"	"54"	"4931879.40032959"	"HCD"	"MS2"	"3.903162"	"389.8"	"100.000"	"34.6527"	"8583"	"8583"	"8563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"618.3"	""	"652.5"	""	"492.9"	""	"578.3"	"2.0"	"695.1"	"650.2"	""	"310"	"36"	"31.000"	"24.000"	"0.003625197719922"	""	"0.000523"	"0.003162"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"402.58850"	"1205.75095"	"1205.75056"	"0.32"	"0.00013"	"5/54"	"5"	"54"	"10593628.930542"	"HCD"	"MS2"	"12.12915"	"705.0"	"100.000"	"34.1962"	"8396"	"8396"	"8373"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1141.5"	""	"1162.5"	""	"936.9"	""	"1086.0"	""	"1243.6"	"1111.5"	""	"310"	"31"	"31.000"	"24.000"	"0.0110746930541705"	"24"	"0.002829"	"0.04608"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVSVTK"	"[K].tLVSVTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"603.38696"	"1205.76665"	"1205.78695"	"-16.83"	"-0.01015"	"6/58"	"6"	"58"	"5428658.21380615"	"HCD"	"MS2"	"46.09592"	"464.7"	"100.000"	"37.2186"	"9636"	"9636"	"9608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"661.7"	""	"632.0"	""	"617.9"	""	"681.3"	""	"906.2"	"910.3"	""	"226"	"18"	"30.000"	"23.000"	"0.186242350242383"	"19"	"0.00862"	"0.366"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVVVMK"	"[K].gVVVVmk.[R]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"603.38873"	"1205.77019"	"1205.76919"	"0.83"	"0.00050"	"6/50"	"6"	"50"	"3753150.39025879"	"HCD"	"MS2"	"14.56042"	"313.1"	"100.000"	"35.1183"	"8774"	"8774"	"8750"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"472.7"	""	"449.2"	""	"471.8"	""	"509.8"	"3.1"	"546.2"	"509.6"	""	"204"	"21"	"30.000"	"23.000"	"0.0800940347302273"	"20"	"0.001587"	"0.02129"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVSVTK"	"[K].tLVSVTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"603.39679"	"1205.78630"	"1205.78695"	"-0.53"	"-0.00032"	"6/58"	"6"	"58"	"9663945.55615234"	"HCD"	"MS2"	"38.72388"	"673.1"	"92.523"	"37.2044"	"9673"	"9673"	"9654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"975.7"	""	"954.7"	""	"884.1"	""	"901.0"	""	"1274.3"	"1400.6"	""	"78"	"21"	"25.000"	"18.000"	"0.0317003901303999"	"18"	"0.001217"	"0.01723"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVSVTK"	"[K].tLVSVTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"603.39685"	"1205.78642"	"1205.78695"	"-0.43"	"-0.00026"	"12/58"	"12"	"58"	"30495684.7254028"	"HCD"	"MS2"	"17.83908"	"2114.2"	"100.000"	"36.7944"	"9462"	"9462"	"9434"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3285.5"	""	"2944.5"	""	"3074.9"	""	"3484.0"	""	"3639.0"	"3600.6"	""	"78"	"43"	"25.000"	"18.000"	"0.000185380738117694"	"17"	"0.002711"	"0.04247"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVSVTK"	"[K].tLVSVTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.39728"	"1205.78728"	"1205.78695"	"0.28"	"0.00017"	"12/58"	"12"	"58"	"29777515.4943237"	"HCD"	"MS2"	"6.966395"	"1900.1"	"100.000"	"36.8902"	"9544"	"9544"	"9526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3005.3"	""	"2630.5"	""	"2784.8"	""	"3071.9"	""	"3243.2"	"3270.1"	""	"78"	"43"	"25.000"	"18.000"	"0.000181578576473954"	"15"	"0.001158"	"0.01525"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVSVTK"	"[K].tLVSVTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"603.39740"	"1205.78752"	"1205.78695"	"0.48"	"0.00029"	"6/58"	"6"	"58"	"10584520.4248047"	"HCD"	"MS2"	"28.3979"	"575.4"	"70.342"	"37.0926"	"9584"	"9584"	"9562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"853.7"	""	"845.7"	""	"767.1"	""	"803.5"	""	"1049.8"	"1139.1"	""	"78"	"22"	"25.000"	"18.000"	"0.0259456530918679"	""	"0.002711"	"0.04206"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLLGLGK"	"[K].fLLGLGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Z5"	"Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Cmtr1 PE=1 SV=1"	"Q5U2Z5"	"Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Cmtr1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"603.40472"	"1205.80217"	"1205.80220"	"-0.02"	"-0.00001"	"3/50"	"3"	"50"	"3201006.91241455"	"HCD"	"MS2"	"20.26861"	"228.9"	"100.000"	"62.4206"	"19941"	"19941"	"19923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.5"	""	"292.5"	""	"343.1"	""	"381.0"	""	"459.5"	"407.9"	""	"51"	"10"	"24.000"	"17.000"	"0.271982010913716"	"13"	"0.0008453"	"0.008194"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLLGLGK"	"[K].fLLGLGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Z5"	"Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Cmtr1 PE=1 SV=1"	"Q5U2Z5"	"Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Cmtr1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"603.40472"	"1205.80217"	"1205.80220"	"-0.02"	"-0.00001"	"4/50"	"4"	"50"	"3398175.16699219"	"HCD"	"MS2"	"26.46411"	"245.5"	"100.000"	"62.2656"	"19825"	"19825"	"19801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"316.1"	""	"305.2"	""	"365.2"	""	"423.4"	""	"474.5"	"442.5"	""	"51"	"4"	"24.000"	"17.000"	"1.03881970840049"	"13"	"0.002711"	"0.04048"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVSNVK"	"[R].tTVSNVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"603.87585"	"1206.74443"	"1206.74581"	"-1.14"	"-0.00069"	"6/58"	"6"	"58"	"302211.840576172"	"HCD"	"MS2"	"16.315"	"32.3"	"100.000"	"27.5206"	"5720"	"5720"	"5692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.2"	""	"46.9"	""	"40.4"	""	"46.6"	""	"66.3"	"60.3"	""	"355"	"37"	"32.000"	"25.000"	"0.0038123990915817"	""	"0.0001889"	"0.0004584"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVSNVK"	"[R].tTVSNVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"603.87604"	"1206.74480"	"1206.74581"	"-0.84"	"-0.00050"	"6/58"	"6"	"58"	"367376.774475098"	"HCD"	"MS2"	"0"	"38.6"	"100.000"	"27.5726"	"5776"	"5776"	"5746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.3"	""	"55.1"	""	"55.4"	""	"59.8"	""	"68.2"	"72.1"	""	"331"	"37"	"32.000"	"25.000"	"0.00334039633189298"	""	"0.0001889"	"0.0005121"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NIGLGFK"	"[K].nIGLGFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"402.92130"	"1206.74933"	"1206.76106"	"-9.72"	"-0.00391"	"5/62"	"5"	"62"	"3004029.67510986"	"HCD"	"MS2"	"39.60529"	"197.1"	"100.000"	"44.8573"	"12797"	"12797"	"12771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"259.0"	""	"257.2"	""	"222.9"	""	"307.7"	""	"403.9"	"425.5"	""	"325"	"5"	"32.000"	"25.000"	"5.35615782288369"	"14"	"0.005603"	"0.1792"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGLGFK"	"[K].nIGLGFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"603.87921"	"1206.75115"	"1206.76106"	"-8.22"	"-0.00496"	"6/62"	"6"	"62"	"24352781.4379883"	"HCD"	"MS2"	"2.198292"	"739.9"	"45.334"	"44.6467"	"12661"	"12661"	"12646"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1044.1"	""	"975.3"	""	"916.7"	""	"1120.6"	""	"1448.8"	"1514.8"	""	"318"	"9"	"32.000"	"25.000"	"1.85096038676268"	"14"	"0.005855"	"0.1911"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGLGFK"	"[K].nIGLGFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"603.88007"	"1206.75286"	"1206.76106"	"-6.80"	"-0.00410"	"9/62"	"9"	"62"	"25835601.8852539"	"HCD"	"MS2"	"2.548644"	"673.3"	"37.914"	"44.8321"	"12786"	"12786"	"12771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"974.6"	""	"937.6"	""	"938.7"	""	"987.6"	""	"1275.5"	"1271.1"	""	"300"	"11"	"31.000"	"24.000"	"1.28260006932703"	"16"	"0.006001"	"0.207"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGLGFK"	"[K].nIGLGFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"603.88348"	"1206.75969"	"1206.76106"	"-1.14"	"-0.00069"	"6/62"	"6"	"62"	"16901845.9394531"	"HCD"	"MS2"	"2.469209"	"1076.6"	"78.882"	"44.3530"	"12542"	"12542"	"12533"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1698.4"	""	"1748.1"	""	"1888.0"	""	"1715.4"	"2.5"	"1623.9"	"1485.6"	""	"269"	"36"	"31.000"	"24.000"	"0.00309543924441444"	"21"	"0.0008731"	"0.008504"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGLGFK"	"[K].nIGLGFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"603.88348"	"1206.75969"	"1206.76106"	"-1.14"	"-0.00069"	"6/62"	"6"	"62"	"9955401.03173828"	"HCD"	"MS2"	"18.77934"	"847.2"	"100.000"	"44.5276"	"12663"	"12663"	"12652"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1312.7"	""	"1361.3"	""	"1404.1"	""	"1388.3"	""	"1335.6"	"1200.9"	""	"269"	"33"	"31.000"	"24.000"	"0.00705866034035945"	"19"	"0.0006037"	"0.005558"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AACLTPK"	"[K].aAcLTPk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"604.35010"	"1207.69292"	"1207.69431"	"-1.15"	"-0.00069"	"5/48"	"5"	"48"	"8223119.99035645"	"HCD"	"MS2"	"6.299962"	"666.0"	"99.737"	"37.9752"	"9946"	"9946"	"9927"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"854.2"	""	"948.1"	""	"906.3"	""	"901.2"	"6.7"	"1363.4"	"1340.5"	""	"651"	"24"	"35.000"	"28.000"	"0.126634194695638"	"22"	"0.002393"	"0.03539"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AACLTPK"	"[K].aAcLTPk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"403.23590"	"1207.69315"	"1207.69431"	"-0.96"	"-0.00039"	"5/48"	"5"	"48"	"13309292.2894897"	"HCD"	"MS2"	"2.518505"	"612.0"	"100.000"	"37.7091"	"9837"	"9837"	"9816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"798.5"	""	"884.5"	""	"797.4"	""	"799.6"	""	"1273.1"	"1259.0"	""	"651"	"25"	"35.000"	"28.000"	"0.105572545447213"	"21"	"0.001966"	"0.02935"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AACLTPK"	"[K].aAcLTPk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"604.35028"	"1207.69328"	"1207.69431"	"-0.85"	"-0.00051"	"5/48"	"5"	"48"	"7335686.88519287"	"HCD"	"MS2"	"15.0761"	"571.5"	"97.740"	"38.1075"	"10044"	"10044"	"10017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"726.3"	""	"831.7"	""	"780.7"	""	"796.3"	"0.2"	"1146.0"	"1140.7"	""	"651"	"22"	"35.000"	"28.000"	"0.186445108085887"	"20"	"0.002953"	"0.05308"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AACLTPK"	"[K].aAcLTPk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"403.23608"	"1207.69370"	"1207.69431"	"-0.50"	"-0.00020"	"5/48"	"5"	"48"	"13638322.7009888"	"HCD"	"MS2"	"9.58787"	"613.4"	"100.000"	"37.7909"	"9914"	"9914"	"9889"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"840.0"	""	"910.9"	""	"770.7"	""	"772.2"	""	"1252.9"	"1278.6"	""	"645"	"23"	"35.000"	"28.000"	"0.179692404030548"	"22"	"0.00274"	"0.04422"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AACLTPK"	"[K].aAcLTPk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"604.35071"	"1207.69414"	"1207.69431"	"-0.14"	"-0.00008"	"10/48"	"10"	"48"	"105370589.213867"	"HCD"	"MS2"	"19.62906"	"725.6"	"9.835"	"37.7704"	"9906"	"9906"	"9889"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"978.3"	""	"1096.6"	""	"932.1"	""	"944.4"	""	"1440.5"	"1503.4"	""	"645"	"32"	"35.000"	"28.000"	"0.0199769746712262"	"18"	"0.004346"	"0.121"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AACLTPK"	"[K].aAcLTPk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"604.35107"	"1207.69487"	"1207.69431"	"0.47"	"0.00028"	"10/48"	"10"	"48"	"95210167.0068359"	"HCD"	"MS2"	"27.7519"	"956.0"	"13.832"	"37.6589"	"9817"	"9817"	"9800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1280.0"	""	"1472.1"	""	"1213.8"	""	"1247.4"	""	"1924.3"	"1937.7"	""	"640"	"30"	"35.000"	"28.000"	"0.0295903415660231"	"19"	"0.004726"	"0.1372"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"YLPFVPSR"	"[K].yLPFVPSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"604.35541"	"1207.70354"	"1207.70366"	"-0.10"	"-0.00006"	"4/56"	"4"	"56"	"7172940.90161133"	"HCD"	"MS2"	"21.21303"	"355.5"	"100.000"	"51.4077"	"15413"	"15413"	"15394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"491.3"	""	"560.9"	""	"513.6"	""	"508.1"	"7.6"	"687.6"	"598.7"	""	"562"	"12"	"34.000"	"27.000"	"1.88237575246044"	"18"	"0.000494"	"0.002738"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"YLPFVPSR"	"[K].yLPFVPSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"P50609"	"Fibromodulin OS=Rattus norvegicus OX=10116 GN=Fmod PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"604.35553"	"1207.70378"	"1207.70366"	"0.10"	"0.00006"	"4/56"	"4"	"56"	"6457586.99835205"	"HCD"	"MS2"	"40.55734"	"323.6"	"100.000"	"51.5294"	"15513"	"15513"	"15494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"436.9"	""	"492.3"	""	"488.8"	""	"467.9"	"3.3"	"649.5"	"527.9"	""	"562"	"12"	"34.000"	"27.000"	"1.93066231643999"	"20"	"0.001217"	"0.01784"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVVEAGK"	"[R].fVVEAGk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"604.37604"	"1207.74480"	"1207.74508"	"-0.23"	"-0.00014"	"6/48"	"6"	"48"	"10972130.8690796"	"HCD"	"MS2"	"47.90139"	"788.9"	"91.021"	"38.7224"	"10253"	"10253"	"10230"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1051.9"	""	"1197.8"	""	"1250.3"	""	"1148.1"	""	"1446.5"	"1378.4"	""	"264"	"33"	"31.000"	"24.000"	"0.00700767466384905"	"23"	"0.0008453"	"0.008024"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVVEAGK"	"[R].fVVEAGk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"604.37610"	"1207.74492"	"1207.74508"	"-0.13"	"-0.00008"	"10/48"	"10"	"48"	"12318530.4993896"	"HCD"	"MS2"	"49.39394"	"496.2"	"48.129"	"38.8288"	"10340"	"10340"	"10318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"663.8"	""	"747.3"	""	"767.8"	""	"751.3"	""	"908.7"	"866.8"	""	"264"	"26"	"31.000"	"24.000"	"0.0366922151344226"	"18"	"0.001389"	"0.01915"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSMLGTK"	"[R].gGSMLGTk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"604.85669"	"1208.70610"	"1208.70731"	"-1.00"	"-0.00061"	"7/64"	"7"	"64"	"4247494.82275391"	"HCD"	"MS2"	"0"	"356.3"	"100.000"	"31.7414"	"7402"	"7402"	"7382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"596.1"	""	"516.1"	""	"496.4"	""	"362.5"	"0.9"	"676.5"	"727.6"	""	"532"	"47"	"34.000"	"27.000"	"0.000538123101528421"	""	"0.0001889"	"0.0009422"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSMLGTK"	"[R].gGSMLGTk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"604.85669"	"1208.70610"	"1208.70731"	"-1.00"	"-0.00061"	"7/64"	"7"	"64"	"4387688.80578613"	"HCD"	"MS2"	"5.318827"	"371.0"	"100.000"	"31.8945"	"7507"	"7507"	"7482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"620.4"	""	"535.3"	""	"531.6"	""	"405.8"	""	"682.5"	"742.6"	""	"532"	"45"	"34.000"	"27.000"	"0.000803307157626936"	""	"0.0001889"	"0.0008729"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAGHLK"	"[R].lLAGHLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"403.94040"	"1209.80664"	"1209.80835"	"-1.41"	"-0.00057"	"10/50"	"10"	"50"	"22094868.7922974"	"HCD"	"MS2"	"0"	"973.3"	"100.000"	"34.7377"	"8618"	"8618"	"8590"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1517.1"	""	"1460.6"	""	"1438.8"	""	"1660.5"	""	"1528.3"	"1604.2"	""	"46"	"36"	"23.000"	"16.000"	"0.000558120321868956"	""	"0.0003839"	"0.00186"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAGHLK"	"[R].lLAGHLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"605.40723"	"1209.80718"	"1209.80835"	"-0.97"	"-0.00059"	"12/50"	"12"	"50"	"4277024.81280518"	"HCD"	"MS2"	"8.99232"	"303.5"	"100.000"	"34.8867"	"8679"	"8679"	"8654"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"462.3"	""	"440.8"	""	"433.9"	""	"498.5"	""	"504.7"	"531.0"	""	"46"	"40"	"23.000"	"16.000"	"0.000215639261592953"	""	"0.0005564"	"0.003494"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAGHLK"	"[R].lLAGHLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"403.94064"	"1209.80738"	"1209.80835"	"-0.80"	"-0.00032"	"10/50"	"10"	"50"	"34615847.508728"	"HCD"	"MS2"	"11.04027"	"1359.0"	"100.000"	"34.8180"	"8694"	"8694"	"8666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2014.5"	""	"1994.0"	""	"2043.0"	""	"2284.9"	""	"2171.9"	"2350.0"	""	"46"	"32"	"23.000"	"16.000"	"0.00132656286580218"	""	"0.0004166"	"0.00228"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAGHLK"	"[R].lLAGHLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"605.40753"	"1209.80779"	"1209.80835"	"-0.46"	"-0.00028"	"6/50"	"6"	"50"	"5582813.0892334"	"HCD"	"MS2"	"7.358892"	"373.3"	"100.000"	"34.8936"	"8725"	"8725"	"8698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"562.7"	""	"513.3"	""	"548.1"	""	"598.2"	""	"633.0"	"678.5"	""	"46"	"37"	"23.000"	"16.000"	"0.000434238010292147"	""	"0.00103"	"0.01222"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIVMGASFR"	"[K].tIVMGASFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.3696"	"0.0000"	"1"	"1"	"1"	"605.84406"	"1210.68083"	"1210.68154"	"-0.59"	"-0.00036"	"7/76"	"7"	"76"	"14910348.6698608"	"HCD"	"MS2"	"17.57755"	"856.6"	"100.000"	"40.8434"	"11120"	"11120"	"11093"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1140.7"	""	"1384.6"	""	"1327.2"	""	"1172.1"	"6.7"	"1470.1"	"1608.7"	""	"479"	"46"	"33.000"	"26.000"	"0.000542382311668537"	""	"0.0001889"	"0.0004358"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIVMGASFR"	"[K].tIVMGASFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.3696"	"0.0000"	"1"	"1"	"1"	"605.84448"	"1210.68169"	"1210.68154"	"0.12"	"0.00007"	"7/76"	"7"	"76"	"16052876.6766357"	"HCD"	"MS2"	"22.02877"	"930.3"	"100.000"	"41.0200"	"11236"	"11236"	"11213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1253.8"	""	"1487.4"	""	"1500.2"	""	"1296.0"	"1.2"	"1568.2"	"1697.8"	""	"478"	"46"	"33.000"	"26.000"	"0.000568064828503345"	""	"0.0001889"	"0.0004322"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQPIPNK"	"[K].gQPIPNk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"606.37842"	"1211.74956"	"1211.75123"	"-1.38"	"-0.00083"	"5/60"	"5"	"60"	"2741373.21105957"	"HCD"	"MS2"	"0"	"184.0"	"100.000"	"29.1456"	"6384"	"6384"	"6378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.9"	""	"295.6"	""	"193.2"	""	"330.4"	"3.0"	"318.0"	"292.6"	""	"196"	"23"	"29.000"	"22.000"	"0.0537311425622437"	"21"	"0.00274"	"0.04298"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQPIPNK"	"[K].gQPIPNk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"606.37897"	"1211.75066"	"1211.75123"	"-0.47"	"-0.00029"	"10/60"	"10"	"60"	"2386842.80767822"	"HCD"	"MS2"	"0"	"155.8"	"100.000"	"29.0854"	"6318"	"6318"	"6304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.9"	""	"245.8"	""	"173.0"	""	"268.0"	"2.6"	"264.3"	"258.8"	""	"194"	"24"	"29.000"	"22.000"	"0.0363723812178119"	"22"	"0.0006037"	"0.006097"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPSVPK"	"[R].iLPSVPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.40985"	"1211.81243"	"1211.81277"	"-0.28"	"-0.00017"	"6/48"	"6"	"48"	"3705659.88793945"	"HCD"	"MS2"	"32.29815"	"256.1"	"100.000"	"43.7471"	"12295"	"12295"	"12280"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"355.7"	""	"357.5"	""	"392.6"	""	"420.6"	"5.6"	"436.6"	"455.3"	""	"41"	"11"	"23.000"	"16.000"	"0.179785168334445"	"13"	"0.001966"	"0.03046"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIHSWLTR"	"[R].aIHSWLTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"404.90573"	"1212.70264"	"1212.70506"	"-1.99"	"-0.00081"	"6/62"	"6"	"62"	"2994986.66802979"	"HCD"	"MS2"	"38.39887"	"107.9"	"100.000"	"33.8389"	"8297"	"8297"	"8266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.2"	""	"140.5"	""	"172.6"	""	"160.3"	"1.4"	"204.2"	"196.1"	""	"435"	"11"	"33.000"	"26.000"	"1.80908620214831"	"16"	"0.0006037"	"0.005619"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIHSWLTR"	"[R].aIHSWLTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"3"	"3"	"0.6579"	"0.0000"	"1"	"1"	"1"	"404.90576"	"1212.70273"	"1212.70506"	"-1.92"	"-0.00078"	"6/62"	"6"	"62"	"19183782.5055542"	"HCD"	"MS2"	"40.11773"	"189.7"	"80.561"	"33.4517"	"8096"	"8096"	"8084"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"293.3"	""	"278.1"	""	"279.3"	""	"292.4"	""	"324.7"	"330.5"	""	"435"	"38"	"33.000"	"26.000"	"0.00340768357748523"	""	"0.0001889"	"0.0004599"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIHSWLTR"	"[R].aIHSWLTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"404.90576"	"1212.70273"	"1212.70506"	"-1.92"	"-0.00078"	"6/62"	"6"	"62"	"17847370.9664307"	"HCD"	"MS2"	"10.20473"	"217.8"	"100.000"	"33.5022"	"8160"	"8160"	"8145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.6"	""	"302.3"	""	"317.0"	""	"358.3"	""	"386.7"	"377.6"	""	"435"	"35"	"33.000"	"26.000"	"0.00707064871813319"	"26"	"0.0001889"	"0.0007839"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIHSWLTR"	"[R].aIHSWLTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"606.85626"	"1212.70525"	"1212.70506"	"0.16"	"0.00010"	"7/62"	"7"	"62"	"3459240.45159912"	"HCD"	"MS2"	"100"	"246.1"	"100.000"	"33.5341"	"8173"	"8173"	"8156"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"354.8"	""	"343.4"	""	"362.6"	""	"384.2"	"6.0"	"437.4"	"441.5"	""	"364"	"18"	"32.000"	"25.000"	"0.301350133351454"	"16"	"0.0002723"	"0.001394"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIHSWLTR"	"[R].aIHSWLTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"606.85657"	"1212.70586"	"1212.70506"	"0.66"	"0.00040"	"6/62"	"6"	"62"	"3148492.03302002"	"HCD"	"MS2"	"21.49114"	"190.0"	"100.000"	"33.5157"	"8122"	"8122"	"8105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.7"	""	"255.9"	""	"264.0"	""	"288.5"	"2.6"	"340.0"	"362.6"	""	"362"	"29"	"32.000"	"25.000"	"0.0249274913869805"	"20"	"0.0001889"	"0.001097"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFNAIIHR"	"[R].lFNAIIHR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"404.91791"	"1212.73917"	"1212.74144"	"-1.87"	"-0.00076"	"4/68"	"4"	"68"	"5016549.31060791"	"HCD"	"MS2"	"54.16343"	"89.9"	"100.000"	"42.4665"	"11826"	"11826"	"11795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.5"	""	"136.9"	""	"145.1"	""	"132.6"	""	"150.4"	"180.2"	""	"295"	"22"	"31.000"	"24.000"	"0.0997222388703173"	"15"	"0.0003839"	"0.001659"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFNAIIHR"	"[R].lFNAIIHR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"404.91812"	"1212.73981"	"1212.74144"	"-1.35"	"-0.00054"	"8/68"	"8"	"68"	"6477489.03448486"	"HCD"	"MS2"	"0"	"101.3"	"100.000"	"42.2395"	"11689"	"11689"	"11660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.8"	""	"163.8"	""	"170.8"	""	"125.3"	""	"172.9"	"195.8"	""	"287"	"31"	"31.000"	"24.000"	"0.0117449697097342"	"18"	"0.0001889"	"0.001035"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIIWSPVR"	"[K].lIIWSPVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"0"	"2"	"2"	"0.0870"	"0.0000"	"1"	"1"	"1"	"606.88696"	"1212.76665"	"1212.76659"	"0.04"	"0.00003"	"5/56"	"5"	"56"	"6198714.24743652"	"HCD"	"MS2"	"12.73569"	"243.1"	"100.000"	"62.3444"	"19910"	"19910"	"19891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"365.7"	""	"419.1"	""	"427.7"	""	"334.2"	"3.4"	"368.9"	"376.6"	""	"170"	"23"	"29.000"	"22.000"	"0.0440980033089617"	""	"0.0006037"	"0.003793"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIIWSPVR"	"[K].lIIWSPVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"0"	"2"	"2"	"0.0870"	"0.0000"	"1"	"1"	"1"	"606.88696"	"1212.76665"	"1212.76659"	"0.04"	"0.00003"	"5/56"	"5"	"56"	"6051647.13922119"	"HCD"	"MS2"	"19.96817"	"227.0"	"100.000"	"62.2174"	"19805"	"19805"	"19785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.9"	""	"368.5"	""	"405.7"	""	"320.2"	"1.6"	"333.2"	"342.8"	""	"170"	"23"	"29.000"	"22.000"	"0.0421132662184072"	""	"0.00103"	"0.01153"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAVIPK"	"[R].vQAVIPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"606.90710"	"1212.80693"	"1212.80801"	"-0.89"	"-0.00054"	"6/60"	"6"	"60"	"60456314.949707"	"HCD"	"MS2"	"23.45373"	"810.2"	"24.023"	"38.2060"	"10084"	"10084"	"10065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1049.5"	""	"1140.6"	""	"1164.7"	""	"1209.0"	""	"1464.5"	"1657.6"	""	"68"	"43"	"25.000"	"18.000"	"0.000168841389293114"	""	"0.003788"	"0.09014"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAVIPK"	"[R].vQAVIPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"404.94052"	"1212.80701"	"1212.80801"	"-0.83"	"-0.00033"	"5/60"	"5"	"60"	"25508021.6013184"	"HCD"	"MS2"	"14.12661"	"876.4"	"97.143"	"38.1176"	"10005"	"10005"	"9975"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1106.3"	""	"1255.9"	""	"1279.5"	""	"1357.1"	""	"1581.4"	"1732.0"	""	"68"	"24"	"25.000"	"18.000"	"0.013076120589542"	"17"	"0.00103"	"0.01301"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAVIPK"	"[R].vQAVIPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"606.90723"	"1212.80718"	"1212.80801"	"-0.69"	"-0.00042"	"10/60"	"10"	"60"	"46481678.8505859"	"HCD"	"MS2"	"37.83677"	"1120.8"	"39.593"	"38.0922"	"9994"	"9994"	"9975"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1489.4"	""	"1628.8"	""	"1600.8"	""	"1661.0"	""	"2018.9"	"2231.7"	""	"59"	"35"	"24.000"	"17.000"	"0.000937177850841683"	""	"0.00803"	"0.3292"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAVIPK"	"[R].vQAVIPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"404.94061"	"1212.80729"	"1212.80801"	"-0.60"	"-0.00024"	"5/60"	"5"	"60"	"26751173.3408203"	"HCD"	"MS2"	"8.088743"	"977.4"	"100.000"	"38.2311"	"10095"	"10095"	"10065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1223.3"	""	"1387.5"	""	"1415.7"	""	"1519.9"	""	"1774.9"	"1949.7"	""	"59"	"25"	"24.000"	"17.000"	"0.00846880271697284"	""	"0.002297"	"0.03412"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITGSYK"	"[R].sITGSYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"607.36298"	"1213.71868"	"1213.71926"	"-0.48"	"-0.00029"	"6/56"	"6"	"56"	"4647481.24420166"	"HCD"	"MS2"	"15.61475"	"416.3"	"100.000"	"31.7228"	"7395"	"7395"	"7366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"602.1"	""	"567.6"	""	"596.9"	""	"625.4"	""	"766.7"	"787.1"	""	"363"	"26"	"32.000"	"25.000"	"0.0432390983688602"	"22"	"0.0008731"	"0.008605"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITGSYK"	"[R].sITGSYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"607.36346"	"1213.71965"	"1213.71926"	"0.32"	"0.00020"	"6/56"	"6"	"56"	"4735544.1708374"	"HCD"	"MS2"	"0"	"407.0"	"100.000"	"31.8578"	"7492"	"7492"	"7466"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"570.9"	""	"570.2"	""	"582.6"	""	"583.0"	""	"770.1"	"785.0"	""	"359"	"26"	"32.000"	"25.000"	"0.0430590508963998"	"23"	"0.00103"	"0.01115"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHEAVFLR"	"[R].lHEAVFLR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"405.24625"	"1213.72419"	"1213.72546"	"-1.05"	"-0.00042"	"6/56"	"6"	"56"	"2708053.27905273"	"HCD"	"MS2"	"9.244731"	"112.3"	"100.000"	"35.4669"	"8917"	"8917"	"8891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.0"	""	"161.6"	""	"176.2"	""	"168.6"	"4.9"	"200.4"	"203.7"	""	"377"	"16"	"32.000"	"25.000"	"0.425903642686654"	"21"	"0.0001889"	"0.001082"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHEAVFLR"	"[R].lHEAVFLR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"405.24628"	"1213.72428"	"1213.72546"	"-0.97"	"-0.00039"	"6/56"	"6"	"56"	"2988065.1350708"	"HCD"	"MS2"	"6.329202"	"113.9"	"100.000"	"35.5245"	"8984"	"8984"	"8954"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.3"	""	"154.6"	""	"179.3"	""	"175.6"	"0.8"	"216.7"	"201.9"	""	"377"	"17"	"32.000"	"25.000"	"0.35100342526095"	"17"	"0.0002277"	"0.001185"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVNQPK"	"[K].iGVNQPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"607.38635"	"1213.76543"	"1213.76688"	"-1.19"	"-0.00072"	"5/56"	"5"	"56"	"3484178.69024658"	"HCD"	"MS2"	"29.0276"	"247.6"	"100.000"	"30.8555"	"7042"	"7042"	"7016"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.8"	""	"319.2"	""	"330.6"	""	"505.2"	""	"449.4"	"434.1"	""	"255"	"8"	"31.000"	"24.000"	"1.84718411326957"	"15"	"0.001966"	"0.0282"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVNQPK"	"[K].iGVNQPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.38672"	"1213.76616"	"1213.76688"	"-0.59"	"-0.00036"	"5/56"	"5"	"56"	"4072514.89282227"	"HCD"	"MS2"	"27.8089"	"291.7"	"100.000"	"30.9426"	"7117"	"7117"	"7088"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"358.9"	""	"375.2"	""	"391.0"	""	"587.8"	"1.7"	"530.0"	"520.0"	""	"249"	"9"	"30.000"	"23.000"	"1.43935974152916"	"13"	"0.001217"	"0.01648"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPLIFR"	"[R].lLLPLIFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"607.41467"	"1213.82207"	"1213.82338"	"-1.08"	"-0.00066"	"6/58"	"6"	"58"	"2075042.72497559"	"HCD"	"MS2"	"12.23776"	"89.0"	"100.000"	"85.0208"	"29143"	"29143"	"29122"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.3"	""	"93.3"	""	"105.8"	""	"222.1"	"0.8"	"162.2"	"165.1"	""	"75"	"26"	"25.000"	"18.000"	"0.00875046773355376"	""	"0.0001889"	"0.001059"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPLIFR"	"[R].lLLPLIFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"607.41486"	"1213.82244"	"1213.82338"	"-0.78"	"-0.00047"	"6/58"	"6"	"58"	"1217508.57824707"	"HCD"	"MS2"	"4.650297"	"52.6"	"100.000"	"85.3327"	"29270"	"29270"	"29250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.4"	""	"49.2"	""	"66.6"	""	"117.6"	"0.7"	"108.9"	"107.1"	""	"75"	"26"	"25.000"	"18.000"	"0.00891315107484329"	""	"0.0002277"	"0.001215"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPLIFR"	"[R].lLLPLIFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"607.41498"	"1213.82268"	"1213.82338"	"-0.58"	"-0.00035"	"6/58"	"6"	"58"	"1205073.98187256"	"HCD"	"MS2"	"4.644077"	"53.3"	"100.000"	"85.2802"	"29198"	"29198"	"29179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.7"	""	"48.9"	""	"63.1"	""	"121.2"	"1.9"	"109.5"	"110.1"	""	"73"	"27"	"25.000"	"18.000"	"0.00719934298681921"	""	"0.0004166"	"0.002307"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPLIFR"	"[R].lLLPLIFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"607.41516"	"1213.82305"	"1213.82338"	"-0.28"	"-0.00017"	"6/58"	"6"	"58"	"2085692.88336182"	"HCD"	"MS2"	"16.34348"	"92.7"	"100.000"	"84.9731"	"29073"	"29073"	"29051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.6"	""	"88.9"	""	"121.1"	""	"231.9"	""	"171.4"	"184.8"	""	"73"	"25"	"25.000"	"18.000"	"0.0121141477006703"	""	"0.0001889"	"0.0008999"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLALPSVR"	"[K].vMLALPSVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"607.87622"	"1214.74516"	"1214.74923"	"-3.35"	"-0.00203"	"6/64"	"6"	"64"	"2478691.73925781"	"HCD"	"MS2"	"0"	"175.6"	"100.000"	"53.5669"	"16339"	"16339"	"16326"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"257.1"	""	"276.3"	""	"274.5"	""	"239.9"	"7.7"	"301.3"	"304.5"	""	"464"	"28"	"33.000"	"26.000"	"0.0368542845674685"	"25"	"0.001966"	"0.02936"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLALPSVR"	"[K].vMLALPSVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"607.87726"	"1214.74724"	"1214.74923"	"-1.64"	"-0.00100"	"6/64"	"6"	"64"	"2542560.47363281"	"HCD"	"MS2"	"0"	"155.7"	"100.000"	"53.3103"	"16183"	"16183"	"16171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"227.3"	""	"235.9"	""	"240.1"	""	"207.4"	""	"268.8"	"296.6"	""	"447"	"31"	"33.000"	"26.000"	"0.0177124047362385"	""	"0.00103"	"0.01264"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMLRPVLR"	"[K].tMLRPVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"405.59106"	"1214.75864"	"1214.76046"	"-1.50"	"-0.00061"	"7/64"	"7"	"64"	"4774056.71612549"	"HCD"	"MS2"	"9.175548"	"222.3"	"100.000"	"32.5921"	"7793"	"7793"	"7766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"354.2"	""	"329.2"	""	"347.2"	""	"238.0"	""	"392.4"	"444.0"	""	"433"	"20"	"33.000"	"26.000"	"0.197450346720555"	"18"	"0.0006037"	"0.003758"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGQPIK"	"[R].tLGQPIk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"607.89673"	"1214.78618"	"1214.78728"	"-0.90"	"-0.00055"	"6/54"	"6"	"54"	"3655529.12658691"	"HCD"	"MS2"	"0"	"282.5"	"100.000"	"34.5312"	"8533"	"8533"	"8515"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"389.3"	""	"382.2"	""	"400.9"	""	"457.8"	""	"533.4"	"514.4"	""	"248"	"35"	"30.000"	"23.000"	"0.00375337265084562"	""	"0.000523"	"0.003148"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPQAVK"	"[R].lTPQAVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"607.89703"	"1214.78679"	"1214.78728"	"-0.40"	"-0.00024"	"6/54"	"6"	"54"	"3068723.80444336"	"HCD"	"MS2"	"0"	"227.8"	"100.000"	"34.2444"	"8459"	"8459"	"8436"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"318.7"	""	"291.0"	""	"304.7"	""	"384.3"	""	"431.4"	"429.0"	""	"235"	"37"	"30.000"	"23.000"	"0.00261841130039261"	"21"	"0.004007"	"0.103"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGQPIK"	"[R].tLGQPIk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"607.89709"	"1214.78691"	"1214.78728"	"-0.30"	"-0.00018"	"6/54"	"6"	"54"	"4525326.58099365"	"HCD"	"MS2"	"0"	"333.5"	"100.000"	"34.5701"	"8592"	"8592"	"8570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"473.4"	""	"450.1"	""	"471.7"	""	"530.9"	"0.9"	"625.2"	"607.9"	""	"235"	"36"	"30.000"	"23.000"	"0.00328123901345387"	""	"0.0006037"	"0.005597"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPLQVAK"	"[K].tPLQVAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z2X3"	"26S proteasome non-ATPase regulatory subunit 10 OS=Rattus norvegicus OX=10116 GN=Psmd10 PE=2 SV=1"	"Q9Z2X3"	"26S proteasome non-ATPase regulatory subunit 10 OS=Rattus norvegicus OX=10116 GN=Psmd10 PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"607.89716"	"1214.78703"	"1214.78728"	"-0.20"	"-0.00012"	"6/54"	"6"	"54"	"1698749.2779541"	"HCD"	"MS2"	"12.32106"	"172.9"	"100.000"	"35.1574"	"8833"	"8833"	"8810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.0"	"2.6"	"199.2"	""	"250.8"	""	"280.5"	"5.3"	"337.7"	"319.5"	""	"235"	"25"	"30.000"	"23.000"	"0.0380222546892313"	"18"	"0.001846"	"0.02555"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPQAVK"	"[R].lTPQAVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"607.89893"	"1214.79057"	"1214.78728"	"2.71"	"0.00165"	"10/54"	"10"	"54"	"3518295.12615967"	"HCD"	"MS2"	"25.88231"	"258.2"	"100.000"	"34.2122"	"8403"	"8403"	"8373"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"356.6"	""	"353.4"	"2.8"	"341.5"	""	"407.4"	""	"507.9"	"481.4"	""	"243"	"25"	"30.000"	"23.000"	"0.0406983008576761"	"22"	"0.005603"	"0.1794"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQAIAK"	"[R].lLQAIAk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"607.91425"	"1214.82121"	"1214.82366"	"-2.02"	"-0.00123"	"12/58"	"12"	"58"	"2823880.00628662"	"HCD"	"MS2"	"30.52161"	"193.1"	"100.000"	"48.4237"	"14250"	"14250"	"14226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.7"	"3.1"	"227.5"	""	"254.2"	""	"324.8"	""	"409.8"	"404.0"	""	"70"	"39"	"25.000"	"18.000"	"0.000486483420924674"	""	"0.0006037"	"0.005632"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQAIAK"	"[R].lLQAIAk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"2"	"2"	"0.3200"	"0.0000"	"1"	"1"	"1"	"607.91479"	"1214.82231"	"1214.82366"	"-1.11"	"-0.00068"	"6/58"	"6"	"58"	"2644131.90509033"	"HCD"	"MS2"	"29.16666"	"174.7"	"100.000"	"48.1580"	"14094"	"14094"	"14064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.2"	""	"208.6"	""	"205.8"	""	"302.8"	""	"365.2"	"381.6"	""	"70"	"25"	"25.000"	"18.000"	"0.0114569243207593"	""	"0.0006737"	"0.006424"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTLADGGR"	"[K].aLLTLADGGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"608.36407"	"1215.72087"	"1215.72585"	"-4.10"	"-0.00249"	"7/78"	"7"	"78"	"2460584.76373291"	"HCD"	"MS2"	"0"	"189.9"	"100.000"	"45.9594"	"13243"	"13243"	"13227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.9"	""	"245.8"	""	"260.2"	""	"317.5"	"0.4"	"359.2"	"379.6"	""	"639"	"24"	"35.000"	"28.000"	"0.130458043933295"	"18"	"0.0003839"	"0.001633"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTLADGGR"	"[K].aLLTLADGGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"608.36560"	"1215.72392"	"1215.72585"	"-1.59"	"-0.00096"	"8/78"	"8"	"78"	"2649185.82922363"	"HCD"	"MS2"	"0"	"191.4"	"100.000"	"45.6608"	"13072"	"13072"	"13047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.6"	""	"238.0"	""	"264.8"	""	"335.3"	""	"375.4"	"381.5"	""	"643"	"37"	"35.000"	"28.000"	"0.00583688285581563"	"21"	"0.0001859"	"0.0003193"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTLADGGR"	"[K].aLLTLADGGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"608.36578"	"1215.72429"	"1215.72585"	"-1.28"	"-0.00078"	"7/78"	"7"	"78"	"14784575.0599365"	"HCD"	"MS2"	"5.217313"	"662.9"	"100.000"	"45.5700"	"13088"	"13088"	"13067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"650.3"	""	"744.5"	""	"803.3"	""	"1187.8"	"3.3"	"1445.9"	"1469.0"	""	"654"	"47"	"35.000"	"28.000"	"0.000663052249283459"	"24"	"0"	"0.0001202"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTLADGGR"	"[K].aLLTLADGGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"608.36597"	"1215.72466"	"1215.72585"	"-0.98"	"-0.00060"	"6/78"	"6"	"78"	"15824731.9671631"	"HCD"	"MS2"	"0"	"638.1"	"88.682"	"45.3562"	"12952"	"12952"	"12928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"614.0"	""	"704.4"	""	"769.6"	""	"1180.4"	""	"1385.9"	"1418.0"	""	"654"	"46"	"35.000"	"28.000"	"0.000866059545324391"	"23"	"0"	"0.000142"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHIMAAK"	"[K].sHIMAAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"405.91360"	"1215.72626"	"1215.72838"	"-1.75"	"-0.00071"	"5/48"	"5"	"48"	"6468735.34130859"	"HCD"	"MS2"	"62.36005"	"484.4"	"100.000"	"25.5077"	"4941"	"4941"	"4924"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"699.4"	""	"688.0"	""	"673.7"	""	"700.8"	""	"965.4"	"864.4"	""	"613"	"12"	"34.000"	"27.000"	"2.02502541814328"	"13"	"0.001058"	"0.01452"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHIMAAK"	"[K].sHIMAAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"608.36700"	"1215.72673"	"1215.72838"	"-1.36"	"-0.00083"	"12/48"	"12"	"48"	"679040.796569824"	"HCD"	"MS2"	"0"	"54.0"	"100.000"	"25.5764"	"4969"	"4969"	"4949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.8"	""	"78.0"	""	"79.7"	""	"65.3"	""	"97.2"	"95.0"	""	"701"	"38"	"35.000"	"28.000"	"0.00522021057737675"	"26"	"0.0001889"	"0.0004118"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHIMAAK"	"[K].sHIMAAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"608.36731"	"1215.72734"	"1215.72838"	"-0.86"	"-0.00052"	"6/48"	"6"	"48"	"647151.088012695"	"HCD"	"MS2"	"100"	"52.4"	"100.000"	"25.4537"	"4884"	"4884"	"4863"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.2"	""	"73.3"	""	"73.4"	""	"72.2"	""	"110.3"	"103.9"	""	"698"	"32"	"35.000"	"28.000"	"0.0215191655649657"	"25"	"0.0001889"	"0.0006023"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHGVGFK"	"[R].iHGVGFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"608.38361"	"1215.75994"	"1215.76140"	"-1.20"	"-0.00073"	"5/50"	"5"	"50"	"2284466.94659424"	"HCD"	"MS2"	"21.88367"	"209.8"	"100.000"	"32.9706"	"7948"	"7948"	"7926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.7"	""	"313.5"	""	"325.6"	""	"326.2"	""	"388.0"	"327.6"	""	"498"	"19"	"33.000"	"26.000"	"0.314919350520317"	"15"	"0.000523"	"0.003226"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHGVGFK"	"[R].iHGVGFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"405.92496"	"1215.76032"	"1215.76140"	"-0.89"	"-0.00036"	"8/50"	"8"	"50"	"35277170.7203369"	"HCD"	"MS2"	"72.75021"	"874.4"	"51.299"	"32.8537"	"7900"	"7900"	"7878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1199.1"	""	"1291.8"	""	"1360.9"	""	"1367.5"	""	"1656.3"	"1413.1"	""	"498"	"24"	"33.000"	"26.000"	"0.107944208718495"	"14"	"0.0006037"	"0.004796"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHGVGFK"	"[R].iHGVGFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.38422"	"1215.76116"	"1215.76140"	"-0.20"	"-0.00012"	"5/50"	"5"	"50"	"1439652.83966064"	"HCD"	"MS2"	"0"	"158.6"	"100.000"	"32.9784"	"7909"	"7909"	"7880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.4"	""	"239.1"	""	"260.0"	""	"235.4"	""	"287.4"	"256.8"	""	"498"	"3"	"33.000"	"26.000"	"13.810180252652"	"13"	"0.002953"	"0.05309"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHGVGFK"	"[R].iHGVGFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"405.92529"	"1215.76133"	"1215.76140"	"-0.06"	"-0.00002"	"8/50"	"8"	"50"	"45985675.6379395"	"HCD"	"MS2"	"35.99911"	"683.0"	"32.003"	"32.8040"	"7837"	"7837"	"7816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"903.0"	""	"1017.7"	""	"1069.6"	""	"1126.4"	""	"1306.6"	"1047.0"	""	"498"	"27"	"33.000"	"26.000"	"0.0513096848404231"	"14"	"0.0006037"	"0.00391"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALNVVK"	"[K].nALNVVk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"E9PSK7"	"C-Jun-amino-terminal kinase-interacting protein 3 OS=Rattus norvegicus OX=10116 GN=Mapk8ip3 PE=1 SV=2"	"E9PSK7"	"C-Jun-amino-terminal kinase-interacting protein 3 OS=Rattus norvegicus OX=10116 GN=Mapk8ip3 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"608.39441"	"1215.78154"	"1215.78253"	"-0.81"	"-0.00049"	"6/62"	"6"	"62"	"5568840.93566895"	"HCD"	"MS2"	"31.88926"	"508.4"	"100.000"	"35.4833"	"8967"	"8967"	"8938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"727.6"	""	"604.2"	""	"688.6"	""	"751.1"	""	"884.8"	"1166.8"	""	"323"	"36"	"32.000"	"25.000"	"0.00449958568733708"	"23"	"0.0006037"	"0.004105"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALNVVK"	"[K].nALNVVk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"E9PSK7"	"C-Jun-amino-terminal kinase-interacting protein 3 OS=Rattus norvegicus OX=10116 GN=Mapk8ip3 PE=1 SV=2"	"E9PSK7"	"C-Jun-amino-terminal kinase-interacting protein 3 OS=Rattus norvegicus OX=10116 GN=Mapk8ip3 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"608.39478"	"1215.78227"	"1215.78253"	"-0.21"	"-0.00013"	"6/62"	"6"	"62"	"4741009.78729248"	"HCD"	"MS2"	"42.93176"	"433.6"	"100.000"	"35.4554"	"8912"	"8912"	"8891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.2"	""	"530.5"	""	"580.0"	""	"704.1"	""	"816.1"	"907.0"	""	"321"	"32"	"32.000"	"25.000"	"0.0101970614562205"	""	"0.0005564"	"0.003605"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVPFPK"	"[K].iGVPFPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3T1J9"	"MOB kinase activator 1A OS=Rattus norvegicus OX=10116 GN=Mob1a PE=2 SV=3"	"Q3T1J9"	"MOB kinase activator 1A OS=Rattus norvegicus OX=10116 GN=Mob1a PE=2 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"608.39648"	"1215.78569"	"1215.78655"	"-0.71"	"-0.00043"	"5/50"	"5"	"50"	"5081140.77319336"	"HCD"	"MS2"	"43.26859"	"379.4"	"100.000"	"49.7995"	"14808"	"14808"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"552.1"	""	"470.6"	""	"509.8"	""	"618.6"	""	"693.2"	"753.8"	""	"334"	"18"	"32.000"	"25.000"	"0.280360271026468"	"22"	"0.005603"	"0.1785"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTVVPTK"	"[R].nTVVPTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"608.88623"	"1216.76518"	"1216.76654"	"-1.12"	"-0.00068"	"10/68"	"10"	"68"	"4887646.04052734"	"HCD"	"MS2"	"0"	"288.6"	"100.000"	"30.9331"	"7071"	"7071"	"7048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"366.0"	""	"333.5"	""	"379.9"	""	"543.6"	""	"535.6"	"580.9"	""	"402"	"29"	"33.000"	"26.000"	"0.0271141539400922"	"24"	"0.000523"	"0.003262"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQAVEK"	"[R].iAQAVEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"608.88660"	"1216.76592"	"1216.76654"	"-0.52"	"-0.00031"	"6/56"	"6"	"56"	"2653197.03466797"	"HCD"	"MS2"	"0"	"270.4"	"100.000"	"33.3966"	"8075"	"8075"	"8064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"383.3"	""	"316.8"	""	"322.8"	""	"402.2"	""	"472.8"	"670.9"	""	"384"	"21"	"32.000"	"25.000"	"0.139091704334398"	"25"	"0.000523"	"0.002827"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTVVPTK"	"[R].nTVVPTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"608.88739"	"1216.76750"	"1216.76654"	"0.79"	"0.00048"	"10/68"	"10"	"68"	"5288600.4564209"	"HCD"	"MS2"	"0"	"319.8"	"100.000"	"31.0179"	"7148"	"7148"	"7120"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"401.1"	""	"366.8"	""	"413.7"	""	"587.5"	""	"609.4"	"657.0"	""	"384"	"29"	"32.000"	"25.000"	"0.0247914100533798"	"24"	"0.0006037"	"0.004054"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVATVAK"	"[K].lGVATVAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"608.90454"	"1216.80181"	"1216.80293"	"-0.92"	"-0.00056"	"12/56"	"12"	"56"	"5256625.4942627"	"HCD"	"MS2"	"0"	"407.4"	"100.000"	"37.8229"	"9927"	"9927"	"9905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"501.9"	""	"514.8"	""	"537.2"	""	"722.2"	"3.1"	"799.4"	"785.7"	""	"159"	"39"	"29.000"	"22.000"	"0.000900258288772268"	""	"0.0003146"	"0.001461"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VATVQIK"	"[K].vATVQIk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"608.90454"	"1216.80181"	"1216.80293"	"-0.92"	"-0.00056"	"6/52"	"6"	"52"	"8398696.12353516"	"HCD"	"MS2"	"17.94941"	"609.5"	"95.653"	"36.6220"	"9434"	"9434"	"9415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"602.1"	""	"612.6"	""	"671.9"	""	"1263.7"	""	"1332.8"	"1317.2"	""	"159"	"36"	"29.000"	"22.000"	"0.00182964624483976"	""	"0.001846"	"0.02561"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VATVQIK"	"[K].vATVQIk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"608.90466"	"1216.80205"	"1216.80293"	"-0.72"	"-0.00044"	"6/52"	"6"	"52"	"7840473.2902832"	"HCD"	"MS2"	"25.52166"	"636.4"	"100.000"	"36.5490"	"9361"	"9361"	"9338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"660.6"	""	"660.8"	""	"716.1"	""	"1305.2"	""	"1382.5"	"1331.8"	""	"159"	"38"	"29.000"	"22.000"	"0.00121441501629927"	""	"0.001846"	"0.02658"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVATVAK"	"[K].lGVATVAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"608.90509"	"1216.80290"	"1216.80293"	"-0.02"	"-0.00001"	"7/56"	"7"	"56"	"9865374.78729248"	"HCD"	"MS2"	"0"	"523.3"	"73.477"	"37.6701"	"9821"	"9821"	"9800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"609.6"	""	"656.4"	""	"665.2"	""	"971.3"	""	"1014.4"	"1049.4"	""	"114"	"44"	"27.000"	"20.000"	"0.00021670795590272"	""	"0.0003571"	"0.00152"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSILK"	"[K].qLGSILk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"608.90576"	"1216.80425"	"1216.80293"	"1.08"	"0.00066"	"6/60"	"6"	"60"	"8419507.74487305"	"HCD"	"MS2"	"2.209806"	"525.1"	"82.389"	"42.5949"	"11878"	"11878"	"11859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"730.9"	""	"721.0"	""	"708.9"	""	"847.4"	"14.0"	"959.1"	"994.6"	""	"114"	"38"	"27.000"	"20.000"	"0.000860745687873564"	""	"0.00109"	"0.01477"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIMTAGPR"	"[K].lNImTAGPR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"609.34631"	"1217.68535"	"1217.68736"	"-1.65"	"-0.00100"	"7/78"	"7"	"78"	"2625764.16564941"	"HCD"	"MS2"	"0"	"170.2"	"100.000"	"33.6050"	"8158"	"8158"	"8135"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.6"	""	"197.0"	""	"246.0"	""	"271.8"	"0.7"	"319.0"	"368.0"	""	"904"	"23"	"36.000"	"29.000"	"0.216340801729833"	"15"	"0.001058"	"0.01429"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIMTAGPR"	"[K].lNImTAGPR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"609.34705"	"1217.68682"	"1217.68736"	"-0.45"	"-0.00027"	"7/78"	"7"	"78"	"2782525.62103271"	"HCD"	"MS2"	"0"	"166.6"	"100.000"	"33.6189"	"8207"	"8207"	"8186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.1"	"3.2"	"193.9"	""	"245.1"	""	"272.5"	""	"312.4"	"336.6"	""	"893"	"29"	"36.000"	"29.000"	"0.0550581308036707"	"17"	"0.0007793"	"0.007259"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GINFVSPVR"	"[R].gINFVSPVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"609.36316"	"1217.71904"	"1217.72037"	"-1.09"	"-0.00067"	"8/76"	"8"	"76"	"9861695.70898438"	"HCD"	"MS2"	"9.630515"	"586.5"	"100.000"	"42.7948"	"11960"	"11960"	"11939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"840.2"	""	"808.7"	""	"859.9"	""	"929.0"	"46.3"	"1046.3"	"1023.8"	""	"787"	"34"	"35.000"	"28.000"	"0.016178741525463"	"17"	"0.0001889"	"0.000492"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GINFVSPVR"	"[R].gINFVSPVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"609.36322"	"1217.71916"	"1217.72037"	"-0.99"	"-0.00060"	"6/76"	"6"	"76"	"10873863.5048828"	"HCD"	"MS2"	"12.11033"	"445.2"	"72.530"	"42.5383"	"11811"	"11811"	"11788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"621.3"	""	"604.0"	""	"630.5"	""	"727.6"	"28.2"	"809.7"	"796.4"	""	"786"	"29"	"35.000"	"28.000"	"0.044605925055922"	"16"	"0.0001889"	"0.0005595"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSTPVK"	"[K].iDSTPVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"609.37677"	"1217.74626"	"1217.75056"	"-3.53"	"-0.00215"	"5/52"	"5"	"52"	"1431347.47802734"	"HCD"	"MS2"	"0"	"142.7"	"100.000"	"33.0211"	"7969"	"7969"	"7942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.7"	""	"206.5"	""	"194.6"	""	"242.5"	"2.8"	"264.7"	"236.9"	""	"591"	"21"	"34.000"	"27.000"	"0.228853461250644"	"23"	"0.00119"	"0.01616"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILNNGK"	"[K].tILNNGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"609.38458"	"1217.76189"	"1217.76179"	"0.08"	"0.00005"	"6/54"	"6"	"54"	"6863264.00079346"	"HCD"	"MS2"	"0"	"507.8"	"100.000"	"31.8238"	"7436"	"7436"	"7414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1357.1"	""	"151.3"	""	"225.8"	""	"206.2"	""	"199.5"	"2696.8"	""	"441"	"31"	"33.000"	"26.000"	"0.018425046551999"	""	"0.0008731"	"0.009134"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILNNGK"	"[K].tILNNGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.4054"	"0.0000"	"1"	"1"	"1"	"609.38483"	"1217.76238"	"1217.76179"	"0.48"	"0.00029"	"6/54"	"6"	"54"	"7270299.61431885"	"HCD"	"MS2"	"0"	"518.2"	"100.000"	"31.9769"	"7541"	"7541"	"7514"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1368.2"	""	"186.6"	""	"250.2"	""	"207.5"	""	"202.7"	"2716.7"	""	"439"	"37"	"33.000"	"26.000"	"0.00474716715958081"	""	"0.0008453"	"0.008133"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLELTGK"	"[K].vLELTGk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"609.39575"	"1217.78423"	"1217.78695"	"-2.23"	"-0.00136"	"6/52"	"6"	"52"	"9478305.6895752"	"HCD"	"MS2"	"0"	"695.4"	"100.000"	"43.3765"	"12194"	"12194"	"12185"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"914.8"	""	"918.4"	""	"1007.6"	""	"1108.0"	"4.1"	"1291.0"	"1347.9"	""	"300"	"37"	"31.000"	"24.000"	"0.00303452876801741"	""	"0.0006037"	"0.005828"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLELTGK"	"[K].vLELTGk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"609.39594"	"1217.78459"	"1217.78695"	"-1.93"	"-0.00118"	"6/52"	"6"	"52"	"6779474.70123291"	"HCD"	"MS2"	"0"	"487.4"	"100.000"	"43.0492"	"12016"	"12016"	"12010"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"643.5"	""	"689.5"	""	"683.6"	""	"814.9"	""	"861.5"	"926.2"	""	"274"	"37"	"31.000"	"24.000"	"0.00295610984053915"	""	"0.0006037"	"0.004295"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVGMK"	"[R].vLIVGMk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"609.40509"	"1217.80290"	"1217.80557"	"-2.19"	"-0.00133"	"10/50"	"10"	"50"	"4574177.87640381"	"HCD"	"MS2"	"34.13602"	"349.9"	"100.000"	"50.0652"	"14917"	"14917"	"14894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"564.6"	""	"531.6"	""	"540.0"	""	"486.9"	"23.8"	"570.8"	"590.6"	""	"140"	"26"	"28.000"	"21.000"	"0.0192796009233672"	""	"0.00103"	"0.01185"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLISLK"	"[R].sVLISLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"609.41504"	"1217.82280"	"1217.82333"	"-0.43"	"-0.00026"	"6/56"	"6"	"56"	"8327574.57733154"	"HCD"	"MS2"	"10.40795"	"567.0"	"100.000"	"48.9164"	"14404"	"14404"	"14383"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"700.8"	""	"690.3"	""	"731.5"	""	"1038.4"	""	"1046.8"	"1175.5"	""	"24"	"36"	"20.000"	"13.000"	"0.000328988900631346"	""	"0.001966"	"0.02785"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLISLK"	"[R].sVLISLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"609.41534"	"1217.82341"	"1217.82333"	"0.07"	"0.00004"	"6/56"	"6"	"56"	"9099580.59869385"	"HCD"	"MS2"	"19.18287"	"514.1"	"82.290"	"49.1874"	"14562"	"14562"	"14542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"644.8"	""	"612.9"	""	"659.0"	""	"941.9"	""	"1001.9"	"1020.4"	""	"24"	"37"	"20.000"	"13.000"	"0.000226558961891555"	""	"0.0008731"	"0.008679"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"609.85742"	"1218.70757"	"1218.70942"	"-1.52"	"-0.00093"	"6/66"	"6"	"66"	"8763068.25878906"	"HCD"	"MS2"	"28.35401"	"575.7"	"100.000"	"26.5030"	"5345"	"5345"	"5317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"997.0"	""	"785.5"	""	"842.3"	""	"832.3"	""	"900.9"	"1095.1"	""	"792"	"38"	"35.000"	"28.000"	"0.00689755521863079"	""	"0.0003571"	"0.001501"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.4750"	"0.0000"	"1"	"1"	"1"	"609.85785"	"1218.70842"	"1218.70942"	"-0.82"	"-0.00050"	"6/66"	"6"	"66"	"8569023.04638672"	"HCD"	"MS2"	"17.01104"	"603.8"	"100.000"	"26.4173"	"5273"	"5273"	"5249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1028.3"	""	"815.7"	""	"863.4"	""	"873.4"	""	"950.4"	"1183.7"	""	"790"	"40"	"35.000"	"28.000"	"0.00436111054861318"	""	"0.0001889"	"0.001003"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAAPFITR"	"[R].lTAAPFITR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"609.87292"	"1218.73857"	"1218.74077"	"-1.81"	"-0.00110"	"8/76"	"8"	"76"	"2662059.79193115"	"HCD"	"MS2"	"0"	"150.6"	"100.000"	"46.2844"	"13327"	"13327"	"13304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.1"	""	"194.7"	""	"225.0"	""	"234.5"	"4.9"	"302.3"	"267.6"	""	"646"	"19"	"35.000"	"28.000"	"0.365765317325085"	"28"	"0.000523"	"0.002802"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLENVIR"	"[K].vFLENVIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"609.87305"	"1218.73882"	"1218.74077"	"-1.61"	"-0.00098"	"6/62"	"6"	"62"	"2491397.76898193"	"HCD"	"MS2"	"0"	"172.4"	"100.000"	"54.2290"	"16546"	"16546"	"16525"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.8"	""	"177.9"	""	"198.0"	""	"264.3"	""	"397.7"	"426.4"	""	"610"	"26"	"34.000"	"27.000"	"0.0851725871577388"	"24"	"0.0003839"	"0.001598"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAAPFITR"	"[R].lTAAPFITR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"609.87305"	"1218.73882"	"1218.74077"	"-1.61"	"-0.00098"	"6/76"	"6"	"76"	"2679285.67633057"	"HCD"	"MS2"	"0"	"153.8"	"100.000"	"46.5763"	"13494"	"13494"	"13474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"225.2"	""	"230.5"	""	"224.5"	""	"232.7"	""	"271.0"	"273.2"	""	"610"	"37"	"34.000"	"27.000"	"0.00629940947522211"	""	"0.0003839"	"0.001624"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLENVIR"	"[K].vFLENVIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"609.87305"	"1218.73882"	"1218.74077"	"-1.61"	"-0.00098"	"6/62"	"6"	"62"	"5842465.57476807"	"HCD"	"MS2"	"43.89022"	"340.4"	"100.000"	"53.6469"	"16312"	"16312"	"16301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"347.9"	""	"326.6"	""	"363.4"	""	"538.1"	""	"811.2"	"858.9"	""	"610"	"17"	"34.000"	"27.000"	"0.556288189207489"	"16"	"0.0004166"	"0.002234"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLENVIR"	"[K].vFLENVIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"609.87329"	"1218.73931"	"1218.74077"	"-1.21"	"-0.00073"	"6/62"	"6"	"62"	"7285369.01202393"	"HCD"	"MS2"	"0"	"361.1"	"100.000"	"54.1465"	"16565"	"16565"	"16555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.6"	""	"231.9"	""	"233.2"	""	"555.6"	""	"1088.5"	"1136.1"	""	"622"	"44"	"34.000"	"27.000"	"0.00110856302495562"	"20"	"0.0001889"	"0.000915"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLENVIR"	"[K].vFLENVIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"609.87329"	"1218.73931"	"1218.74077"	"-1.21"	"-0.00073"	"6/62"	"6"	"62"	"7028303.18292236"	"HCD"	"MS2"	"0"	"348.6"	"100.000"	"53.9333"	"16426"	"16426"	"16414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"211.5"	""	"211.0"	""	"220.2"	""	"530.0"	""	"1030.4"	"1146.1"	""	"622"	"41"	"34.000"	"27.000"	"0.00227384254963343"	"19"	"0.0001889"	"0.0009767"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLENVIR"	"[K].vFLENVIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"609.87335"	"1218.73943"	"1218.74077"	"-1.10"	"-0.00067"	"6/62"	"6"	"62"	"6048498.95233154"	"HCD"	"MS2"	"0"	"335.0"	"100.000"	"53.8623"	"16452"	"16452"	"16439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"321.1"	""	"299.1"	""	"317.9"	""	"553.5"	""	"847.5"	"859.0"	""	"622"	"34"	"34.000"	"27.000"	"0.0129050707259287"	"18"	"0.0002277"	"0.001332"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLENVIR"	"[K].vFLENVIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"609.87347"	"1218.73967"	"1218.74077"	"-0.90"	"-0.00055"	"6/62"	"6"	"62"	"2101166.21374512"	"HCD"	"MS2"	"14.72199"	"151.4"	"100.000"	"54.4811"	"16702"	"16702"	"16680"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.7"	"3.1"	"170.2"	""	"186.4"	""	"216.4"	""	"347.7"	"354.6"	""	"620"	"16"	"34.000"	"27.000"	"0.782279039468978"	"22"	"0.0006037"	"0.005252"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5250"	"0.0000"	"1"	"1"	"1"	"609.87488"	"1218.74248"	"1218.74581"	"-2.73"	"-0.00166"	"12/62"	"12"	"62"	"2339774.88391113"	"HCD"	"MS2"	"0"	"199.3"	"100.000"	"28.7536"	"6195"	"6195"	"6190"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.6"	""	"239.3"	""	"262.9"	""	"336.7"	""	"392.6"	"392.5"	""	"601"	"40"	"34.000"	"27.000"	"0.00335617405958058"	""	"0.0004166"	"0.002139"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"609.87518"	"1218.74309"	"1218.74581"	"-2.23"	"-0.00136"	"10/62"	"10"	"62"	"2061444.45751953"	"HCD"	"MS2"	"100"	"181.4"	"100.000"	"28.8167"	"6258"	"6258"	"6253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"227.4"	""	"222.1"	""	"245.4"	""	"322.7"	""	"364.2"	"344.7"	""	"601"	"29"	"34.000"	"27.000"	"0.0342645061162131"	"25"	"0.000523"	"0.003052"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTIPTK"	"[R].nSTIPTk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"609.87573"	"1218.74419"	"1218.74581"	"-1.33"	"-0.00081"	"4/68"	"4"	"68"	"1095378.90936279"	"HCD"	"MS2"	"0"	"87.2"	"100.000"	"29.3742"	"6435"	"6435"	"6406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.3"	""	"126.3"	""	"121.9"	""	"144.1"	"1.0"	"156.3"	"160.6"	""	"578"	"26"	"34.000"	"27.000"	"0.0651475132312052"	""	"0.000523"	"0.003267"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQSLDK"	"[K].aVQSLDk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"609.87579"	"1218.74431"	"1218.74581"	"-1.23"	"-0.00075"	"6/60"	"6"	"60"	"1560783.3057251"	"HCD"	"MS2"	"0"	"135.4"	"100.000"	"31.6103"	"7349"	"7349"	"7318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.7"	""	"169.0"	""	"182.7"	""	"222.5"	"1.0"	"264.7"	"260.9"	""	"578"	"38"	"34.000"	"27.000"	"0.00476318931150872"	"26"	"0.0003839"	"0.001547"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTIPTK"	"[R].nSTIPTk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"609.87616"	"1218.74504"	"1218.74581"	"-0.63"	"-0.00038"	"6/68"	"6"	"68"	"1275695.38049316"	"HCD"	"MS2"	"11.04135"	"102.7"	"100.000"	"29.4229"	"6496"	"6496"	"6468"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.8"	""	"141.6"	""	"155.6"	""	"162.0"	""	"182.5"	"195.5"	""	"540"	"31"	"34.000"	"27.000"	"0.0204344881655663"	"26"	"0.000494"	"0.002646"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSAGATK"	"[K].lLSAGATk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09330"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3"	"P09330"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"609.89471"	"1218.78215"	"1218.78219"	"-0.03"	"-0.00002"	"6/64"	"6"	"64"	"2665728.81030273"	"HCD"	"MS2"	"17.43809"	"243.1"	"100.000"	"36.2579"	"9285"	"9285"	"9257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"324.4"	""	"294.8"	""	"318.3"	""	"408.5"	"0.4"	"472.5"	"486.6"	""	"217"	"34"	"30.000"	"23.000"	"0.00430952831174343"	""	"0.0001889"	"0.001044"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITSSYYR"	"[R].tITSSYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"610.32996"	"1219.65264"	"1219.65202"	"0.51"	"0.00031"	"6/64"	"6"	"64"	"3979250.0479126"	"HCD"	"MS2"	"0"	"245.3"	"100.000"	"31.5483"	"7365"	"7365"	"7341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.5"	""	"323.5"	""	"364.5"	""	"365.4"	"4.8"	"463.3"	"459.6"	""	"818"	"33"	"36.000"	"29.000"	"0.0207837212007269"	"19"	"0.000523"	"0.002951"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITSSYYR"	"[R].tITSSYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"610.33014"	"1219.65300"	"1219.65202"	"0.81"	"0.00049"	"6/64"	"6"	"64"	"3355245.27960205"	"HCD"	"MS2"	"18.52405"	"221.6"	"100.000"	"31.4521"	"7284"	"7284"	"7254"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.7"	""	"303.9"	""	"305.1"	""	"336.3"	"4.8"	"422.7"	"413.2"	""	"817"	"26"	"36.000"	"29.000"	"0.108941176445702"	"17"	"0.0006037"	"0.003806"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LACGVIGIAQ"	"[R].lAcGVIGIAQ.[-]"	"N-Term(TMT6plex); C3(Methylthio)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"2"	"2"	"0.8356"	"0.0000"	"1"	"1"	"1"	"610.34052"	"1219.67375"	"1219.67402"	"-0.22"	"-0.00013"	"9/74"	"9"	"74"	"2235029.94238281"	"HCD"	"MS2"	"16.94478"	"30.5"	"100.000"	"77.5100"	"26029"	"26029"	"26009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.4"	""	"40.4"	""	"55.6"	""	"49.5"	""	"51.0"	"53.0"	""	"804"	"73"	"36.000"	"29.000"	"1.96891085386116E-06"	"29"	"0.0001308"	"0.0002076"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LACGVIGIAQ"	"[R].lAcGVIGIAQ.[-]"	"N-Term(TMT6plex); C3(Methylthio)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"610.34070"	"1219.67412"	"1219.67402"	"0.08"	"0.00005"	"9/74"	"9"	"74"	"2354124.64251709"	"HCD"	"MS2"	"17.14571"	"34.2"	"100.000"	"77.4948"	"26074"	"26074"	"26053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.4"	""	"49.0"	""	"46.3"	""	"58.1"	"1.4"	"57.9"	"68.4"	""	"803"	"78"	"36.000"	"29.000"	"6.2328338449817E-07"	""	"0.0001859"	"0.0003312"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYHLGMR"	"[R].tLYHLGMR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"407.23126"	"1219.67923"	"1219.68188"	"-2.17"	"-0.00088"	"6/56"	"6"	"56"	"20339415.2518311"	"HCD"	"MS2"	"0"	"168.1"	"50.621"	"33.1631"	"8027"	"8027"	"8006"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.3"	""	"169.9"	""	"168.5"	""	"266.6"	""	"414.4"	"416.0"	""	"850"	"34"	"36.000"	"29.000"	"0.0156094977711686"	"22"	"0.0004166"	"0.002111"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYHLGMR"	"[R].tLYHLGMR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"407.23141"	"1219.67969"	"1219.68188"	"-1.79"	"-0.00073"	"6/56"	"6"	"56"	"22344832.4221191"	"HCD"	"MS2"	"26.74437"	"173.3"	"49.896"	"33.0768"	"7949"	"7949"	"7928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.1"	""	"169.2"	""	"173.3"	""	"294.4"	""	"419.1"	"427.8"	""	"852"	"34"	"36.000"	"29.000"	"0.0153253216776346"	"22"	"0.0003571"	"0.001517"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAAWAK"	"[K].nTAAWAk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"610.36316"	"1219.71904"	"1219.71993"	"-0.73"	"-0.00044"	"12/60"	"12"	"60"	"6345604.91931152"	"HCD"	"MS2"	"3.929315"	"507.3"	"100.000"	"32.7192"	"7802"	"7802"	"7784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"771.3"	""	"746.8"	""	"673.0"	""	"778.1"	""	"863.7"	"975.8"	""	"702"	"40"	"35.000"	"28.000"	"0.00355882896393575"	""	"0.0004166"	"0.00215"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAAWAK"	"[K].nTAAWAk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"610.36316"	"1219.71904"	"1219.71993"	"-0.73"	"-0.00044"	"12/60"	"12"	"60"	"21684034.50354"	"HCD"	"MS2"	"2.772684"	"1654.5"	"100.000"	"32.4188"	"7679"	"7679"	"7656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2673.8"	""	"2449.9"	""	"2274.1"	""	"2613.5"	""	"2648.9"	"2998.4"	""	"702"	"42"	"35.000"	"28.000"	"0.00200127659570542"	""	"0.0006037"	"0.004927"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAAWAK"	"[K].nTAAWAk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"610.36328"	"1219.71929"	"1219.71993"	"-0.53"	"-0.00032"	"12/60"	"12"	"60"	"6790997.83154297"	"HCD"	"MS2"	"2.896893"	"565.2"	"100.000"	"32.8012"	"7879"	"7879"	"7862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"864.4"	""	"811.3"	""	"780.5"	""	"890.6"	""	"928.5"	"1079.7"	""	"702"	"42"	"35.000"	"28.000"	"0.00215430463812843"	"26"	"0.0004166"	"0.002303"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAAWAK"	"[K].nTAAWAk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"610.36371"	"1219.72014"	"1219.71993"	"0.17"	"0.00011"	"12/60"	"12"	"60"	"20211489.718811"	"HCD"	"MS2"	"10.56366"	"1553.4"	"100.000"	"32.5094"	"7759"	"7759"	"7734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2555.7"	""	"2305.4"	""	"2104.8"	""	"2527.0"	""	"2454.7"	"2743.3"	""	"681"	"42"	"35.000"	"28.000"	"0.00198206145650982"	""	"0.0007793"	"0.007218"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLDLFR"	"[M].vLDLDLFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"610.36536"	"1219.72344"	"1219.72479"	"-1.11"	"-0.00068"	"7/60"	"7"	"60"	"6088020.22253418"	"HCD"	"MS2"	"20.58835"	"261.7"	"100.000"	"72.1215"	"23842"	"23842"	"23825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.0"	""	"360.6"	""	"367.3"	""	"444.1"	""	"448.9"	"480.4"	""	"705"	"40"	"35.000"	"28.000"	"0.00314890183015986"	"22"	"0.0001889"	"0.0008254"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLDLFR"	"[M].vLDLDLFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"610.36548"	"1219.72368"	"1219.72479"	"-0.91"	"-0.00055"	"11/60"	"11"	"60"	"6020693.4901123"	"HCD"	"MS2"	"19.85294"	"258.4"	"100.000"	"72.0737"	"23873"	"23873"	"23855"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"390.5"	""	"355.2"	""	"372.0"	""	"414.1"	""	"436.0"	"480.8"	""	"705"	"38"	"35.000"	"28.000"	"0.00513049325905143"	"21"	"0.0001889"	"0.0006931"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADAMK"	"[K].lLADAMk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"610.37750"	"1219.74773"	"1219.74845"	"-0.59"	"-0.00036"	"6/48"	"6"	"48"	"8907208.10632324"	"HCD"	"MS2"	"7.188768"	"644.3"	"92.913"	"44.6397"	"12708"	"12708"	"12692"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"744.6"	""	"843.3"	""	"840.5"	""	"888.0"	""	"1335.0"	"1474.4"	""	"468"	"24"	"33.000"	"26.000"	"0.0855491812374712"	"26"	"0.0009727"	"0.01042"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADAMK"	"[K].lLADAMk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"610.37769"	"1219.74809"	"1219.74845"	"-0.29"	"-0.00018"	"6/48"	"6"	"48"	"15419167.2041626"	"HCD"	"MS2"	"7.541912"	"1080.9"	"100.000"	"44.3556"	"12593"	"12593"	"12572"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1195.7"	""	"1465.5"	""	"1345.5"	""	"1473.4"	""	"2240.6"	"2557.4"	""	"496"	"37"	"33.000"	"26.000"	"0.00555202842364949"	"25"	"0.0006396"	"0.006209"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADAMK"	"[K].lLADAMk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"610.37775"	"1219.74822"	"1219.74845"	"-0.19"	"-0.00012"	"6/48"	"6"	"48"	"17415432.2225952"	"HCD"	"MS2"	"5.924152"	"1306.8"	"94.961"	"44.1470"	"12458"	"12458"	"12438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1437.0"	""	"1715.9"	""	"1603.3"	""	"1752.5"	""	"2840.6"	"3093.3"	""	"496"	"36"	"33.000"	"26.000"	"0.00590815228400956"	"25"	"0.0006737"	"0.006525"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTILELFR"	"[K].vTILELFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11167"	"Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus OX=10116 GN=Slc2a1 PE=1 SV=1"	"P11167"	"Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus OX=10116 GN=Slc2a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.38348"	"1219.75969"	"1219.76118"	"-1.22"	"-0.00074"	"6/62"	"6"	"62"	"839856.43548584"	"HCD"	"MS2"	"42.45176"	"40.9"	"100.000"	"75.5419"	"25289"	"25289"	"25263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.5"	""	"55.5"	""	"61.9"	""	"63.8"	""	"67.8"	"87.9"	""	"438"	"19"	"33.000"	"26.000"	"0.2880342382501"	"14"	"0.0001889"	"0.0008473"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTILELFR"	"[K].vTILELFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11167"	"Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus OX=10116 GN=Slc2a1 PE=1 SV=1"	"P11167"	"Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus OX=10116 GN=Slc2a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.38440"	"1219.76152"	"1219.76118"	"0.28"	"0.00017"	"6/62"	"6"	"62"	"711009.279907227"	"HCD"	"MS2"	"36.10118"	"37.0"	"100.000"	"75.6049"	"25263"	"25263"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.0"	""	"49.0"	""	"55.1"	""	"60.5"	""	"66.4"	"73.5"	""	"384"	"19"	"32.000"	"25.000"	"0.227667599648095"	"14"	"0.00103"	"0.01149"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSIDSK"	"[K].lVSIDSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"610.38623"	"1219.76518"	"1219.76621"	"-0.84"	"-0.00051"	"6/54"	"6"	"54"	"38510073.3308105"	"HCD"	"MS2"	"5.666494"	"1158.4"	"46.402"	"39.4849"	"10609"	"10609"	"10590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1732.6"	""	"1634.5"	""	"1708.0"	""	"1693.5"	""	"2055.5"	"2153.8"	""	"360"	"28"	"32.000"	"25.000"	"0.0314247987525691"	"23"	"0.001846"	"0.02557"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSIDSK"	"[K].lVSIDSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"610.38660"	"1219.76592"	"1219.76621"	"-0.24"	"-0.00015"	"6/54"	"6"	"54"	"31004915.4832764"	"HCD"	"MS2"	"8.03997"	"1207.2"	"53.933"	"39.3755"	"10521"	"10521"	"10502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1827.0"	""	"1645.2"	""	"1803.3"	""	"1795.6"	""	"2092.2"	"2270.5"	""	"302"	"28"	"31.000"	"24.000"	"0.0220788753342964"	"23"	"0.001587"	"0.02179"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVSAASK"	"[R].iSVSAASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"610.88367"	"1220.76006"	"1220.76146"	"-1.15"	"-0.00070"	"7/66"	"7"	"66"	"4911297.78167725"	"HCD"	"MS2"	"100"	"421.1"	"100.000"	"33.1570"	"7982"	"7982"	"7960"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"590.3"	""	"574.9"	""	"604.9"	""	"663.0"	""	"796.6"	"788.8"	""	"313"	"22"	"31.000"	"24.000"	"0.0934360223503704"	"16"	"0.0003839"	"0.001629"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVSAASK"	"[R].iSVSAASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"610.88367"	"1220.76006"	"1220.76146"	"-1.15"	"-0.00070"	"7/66"	"7"	"66"	"7489469.22637939"	"HCD"	"MS2"	"49.34092"	"524.2"	"89.086"	"33.2135"	"8047"	"8047"	"8033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"782.0"	""	"699.6"	""	"728.0"	""	"813.5"	""	"963.0"	"990.5"	""	"313"	"29"	"31.000"	"24.000"	"0.0204415743992633"	"20"	"0.0003839"	"0.001927"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVHIIGALR"	"[R].lVHIIGALR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"407.60532"	"1220.80140"	"1220.80404"	"-2.17"	"-0.00088"	"6/66"	"6"	"66"	"6635925.25158691"	"HCD"	"MS2"	"49.96007"	"290.1"	"100.000"	"43.0124"	"12050"	"12050"	"12019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"438.3"	""	"414.5"	""	"431.8"	""	"413.2"	"15.2"	"431.6"	"600.6"	""	"51"	"10"	"24.000"	"17.000"	"0.24073552345291"	"13"	"0.001912"	"0.02726"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVIAGHLLR"	"[R].lVIAGHLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"0"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"407.60547"	"1220.80185"	"1220.80404"	"-1.79"	"-0.00073"	"8/66"	"8"	"66"	"2471142.93560791"	"HCD"	"MS2"	"0"	"50.2"	"100.000"	"41.3776"	"11339"	"11339"	"11312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.7"	""	"74.7"	""	"95.5"	""	"77.8"	"0.2"	"78.8"	"78.6"	""	"51"	"55"	"24.000"	"17.000"	"8.38571658733757E-06"	""	"7.476E-05"	"0.0001911"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVSGMK"	"[R].eIVSGMk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"611.36700"	"1221.72673"	"1221.72772"	"-0.81"	"-0.00049"	"6/54"	"6"	"54"	"14125497.7087402"	"HCD"	"MS2"	"7.589923"	"1088.4"	"100.000"	"35.4695"	"8961"	"8961"	"8938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1644.7"	""	"1357.6"	""	"1557.0"	""	"1829.6"	"0.2"	"1896.5"	"2019.4"	""	"554"	"39"	"34.000"	"27.000"	"0.00362643392670836"	"25"	"0.0006037"	"0.004537"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVSGMK"	"[R].eIVSGMk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"611.36719"	"1221.72710"	"1221.72772"	"-0.51"	"-0.00031"	"6/54"	"6"	"54"	"13961489.9627686"	"HCD"	"MS2"	"0"	"1032.4"	"100.000"	"35.4232"	"8899"	"8899"	"8875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1532.9"	""	"1312.9"	""	"1460.1"	""	"1682.3"	"1.1"	"1839.7"	"1948.9"	""	"547"	"39"	"34.000"	"27.000"	"0.00353148471333302"	"25"	"0.0006037"	"0.004467"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HHAISAK"	"[K].hHAISAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"611.37610"	"1221.74492"	"1221.74681"	"-1.55"	"-0.00095"	"10/48"	"10"	"48"	"403392.006408691"	"HCD"	"MS2"	"14.00275"	"26.1"	"100.000"	"19.7759"	"2663"	"2663"	"2654"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.6"	""	"38.8"	""	"32.4"	""	"48.2"	""	"56.7"	"35.6"	""	"359"	"32"	"32.000"	"25.000"	"0.0114568295771204"	"24"	"0.0001889"	"0.0005399"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HHAISAK"	"[K].hHAISAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"407.91983"	"1221.74494"	"1221.74681"	"-1.53"	"-0.00062"	"5/48"	"5"	"48"	"2696537.02624512"	"HCD"	"MS2"	"3.766343"	"137.8"	"100.000"	"19.4404"	"2592"	"2592"	"2588"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.9"	""	"199.8"	""	"196.8"	""	"255.2"	""	"289.6"	"185.1"	""	"359"	"27"	"32.000"	"25.000"	"0.038288156190981"	"21"	"0.0002277"	"0.00132"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HHAISAK"	"[K].hHAISAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"407.91992"	"1221.74521"	"1221.74681"	"-1.31"	"-0.00053"	"5/48"	"5"	"48"	"5968482.35302734"	"HCD"	"MS2"	"6.264447"	"285.7"	"100.000"	"19.7646"	"2659"	"2659"	"2654"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.8"	""	"377.4"	""	"391.4"	""	"519.8"	""	"639.0"	"403.2"	""	"359"	"27"	"32.000"	"25.000"	"0.0382000958753897"	"18"	"0.000523"	"0.003034"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGGEIK"	"[K].iFGGEIk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"611.38336"	"1221.75945"	"1221.76073"	"-1.05"	"-0.00064"	"6/48"	"6"	"48"	"12187308.1296387"	"HCD"	"MS2"	"3.335407"	"491.4"	"53.027"	"45.2529"	"12958"	"12958"	"12939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"673.6"	""	"660.1"	""	"746.0"	""	"797.8"	""	"838.6"	"939.7"	""	"279"	"36"	"31.000"	"24.000"	"0.0034480551822975"	""	"0.0008125"	"0.007487"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGGEIK"	"[K].iFGGEIk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"611.38361"	"1221.75994"	"1221.76073"	"-0.65"	"-0.00040"	"6/48"	"6"	"48"	"21101336.9709473"	"HCD"	"MS2"	"2.537559"	"839.6"	"58.623"	"44.7225"	"12692"	"12692"	"12673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1221.2"	""	"1161.4"	""	"1258.5"	""	"1418.1"	"9.1"	"1390.9"	"1485.7"	""	"278"	"36"	"31.000"	"24.000"	"0.00334206429200964"	""	"0.001007"	"0.01083"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGGEIK"	"[K].iFGGEIk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"611.38409"	"1221.76091"	"1221.76073"	"0.15"	"0.00009"	"6/48"	"6"	"48"	"10336364.8075562"	"HCD"	"MS2"	"7.869427"	"530.3"	"71.437"	"45.0301"	"12818"	"12818"	"12800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"711.9"	""	"722.7"	""	"846.7"	""	"855.5"	""	"922.7"	"963.0"	""	"274"	"34"	"31.000"	"24.000"	"0.00489463788268142"	""	"0.0007793"	"0.007231"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGGEIK"	"[K].iFGGEIk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"611.38409"	"1221.76091"	"1221.76073"	"0.15"	"0.00009"	"6/48"	"6"	"48"	"20790129.4544678"	"HCD"	"MS2"	"1.952713"	"789.4"	"52.510"	"44.9427"	"12831"	"12831"	"12811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1128.9"	""	"1092.9"	""	"1184.5"	""	"1304.3"	"9.7"	"1337.6"	"1413.4"	""	"274"	"33"	"31.000"	"24.000"	"0.0063200507714772"	""	"0.001587"	"0.02111"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPPALAALR"	"[R].aLPPALAALR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"611.39685"	"1221.78642"	"1221.78806"	"-1.34"	"-0.00082"	"13/74"	"13"	"74"	"3559146.62005615"	"HCD"	"MS2"	"47.01409"	"178.0"	"100.000"	"52.5357"	"15925"	"15925"	"15894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.5"	""	"248.6"	""	"265.7"	""	"264.4"	"3.0"	"299.9"	"323.7"	""	"101"	"20"	"27.000"	"20.000"	"0.0456342984229762"	""	"0.0006037"	"0.004735"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLAAVYK"	"[K].vLAAVYk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P00884; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase B OS=Rattus norvegicus OX=10116 GN=Aldob PE=1 SV=2; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"407.93628"	"1221.79428"	"1221.79712"	"-2.32"	"-0.00094"	"7/50"	"7"	"50"	"5039349.49597168"	"HCD"	"MS2"	"50.46082"	"213.4"	"88.527"	"43.0788"	"12077"	"12077"	"12051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"299.4"	""	"306.8"	""	"333.2"	""	"276.9"	"1.9"	"325.3"	"476.5"	""	"77"	"24"	"25.000"	"18.000"	"0.0146372917583416"	"16"	"0.002132"	"0.03212"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLAAVYK"	"[K].vLAAVYk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P00884; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase B OS=Rattus norvegicus OX=10116 GN=Aldob PE=1 SV=2; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"407.93634"	"1221.79447"	"1221.79712"	"-2.17"	"-0.00088"	"7/50"	"7"	"50"	"3286060.09521484"	"HCD"	"MS2"	"0"	"169.9"	"100.000"	"42.8454"	"11937"	"11937"	"11915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.4"	""	"243.6"	""	"258.0"	""	"237.4"	"2.3"	"254.3"	"364.4"	""	"77"	"22"	"25.000"	"18.000"	"0.0219008378374879"	"14"	"0.00423"	"0.1085"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLAAVYK"	"[K].vLAAVYk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P00884; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase B OS=Rattus norvegicus OX=10116 GN=Aldob PE=1 SV=2; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"611.40125"	"1221.79521"	"1221.79712"	"-1.56"	"-0.00095"	"10/50"	"10"	"50"	"134384093.466797"	"HCD"	"MS2"	"11.62054"	"876.7"	"9.420"	"42.7173"	"11885"	"11885"	"11868"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1285.8"	""	"1212.4"	""	"1297.2"	""	"1203.7"	""	"1368.9"	"1940.6"	""	"75"	"30"	"25.000"	"18.000"	"0.00347561183767256"	"17"	"0.007936"	"0.3252"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLAAVYK"	"[K].vLAAVYk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P00884; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase B OS=Rattus norvegicus OX=10116 GN=Aldob PE=1 SV=2; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"611.40149"	"1221.79570"	"1221.79712"	"-1.16"	"-0.00071"	"10/50"	"10"	"50"	"139224212.929199"	"HCD"	"MS2"	"16.48101"	"930.8"	"10.402"	"42.9781"	"12036"	"12036"	"12019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1379.0"	""	"1337.6"	""	"1348.6"	""	"1270.0"	""	"1441.4"	"2042.4"	""	"75"	"29"	"25.000"	"18.000"	"0.00489814083049441"	"16"	"0.005293"	"0.1605"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIVLGLLPR"	"[K].iIVLGLLPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35264"	"Platelet-activating factor acetylhydrolase IB subunit beta OS=Rattus norvegicus OX=10116 GN=Pafah1b2 PE=1 SV=1"	"O35264"	"Platelet-activating factor acetylhydrolase IB subunit beta OS=Rattus norvegicus OX=10116 GN=Pafah1b2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.92548"	"1222.84368"	"1222.84485"	"-0.96"	"-0.00058"	"7/66"	"7"	"66"	"2712548.03808594"	"HCD"	"MS2"	"12.99329"	"105.1"	"100.000"	"74.1950"	"24739"	"24739"	"24719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.3"	""	"158.9"	""	"157.8"	""	"175.8"	""	"177.7"	"193.8"	""	"6"	"44"	"14.000"	"13.000"	"1.15112173647684E-05"	""	"0.000523"	"0.003065"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIVLGLLPR"	"[K].iIVLGLLPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35264"	"Platelet-activating factor acetylhydrolase IB subunit beta OS=Rattus norvegicus OX=10116 GN=Pafah1b2 PE=1 SV=1"	"O35264"	"Platelet-activating factor acetylhydrolase IB subunit beta OS=Rattus norvegicus OX=10116 GN=Pafah1b2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.92596"	"1222.84465"	"1222.84485"	"-0.16"	"-0.00010"	"7/66"	"7"	"66"	"2454026.43475342"	"HCD"	"MS2"	"31.32658"	"96.3"	"100.000"	"74.1396"	"24665"	"24665"	"24641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.6"	""	"119.2"	"2.2"	"156.2"	""	"178.2"	""	"161.1"	"179.7"	""	"6"	"43"	"14.000"	"13.000"	"1.64483089476256E-05"	""	"0.0004557"	"0.002592"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTHLFALR"	"[K].hTHLFALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"612.36304"	"1223.71880"	"1223.72104"	"-1.83"	"-0.00112"	"6/56"	"6"	"56"	"1470756.99407959"	"HCD"	"MS2"	"17.65755"	"88.9"	"100.000"	"27.7621"	"5819"	"5819"	"5788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.4"	""	"102.2"	""	"77.2"	""	"230.9"	""	"252.8"	"76.2"	""	"421"	"37"	"33.000"	"26.000"	"0.0042682721245923"	"17"	"0.0001889"	"0.000702"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTHLFALR"	"[K].hTHLFALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"612.36377"	"1223.72026"	"1223.72104"	"-0.64"	"-0.00039"	"6/56"	"6"	"56"	"1223961.12927246"	"HCD"	"MS2"	"0"	"73.9"	"100.000"	"27.8760"	"5900"	"5900"	"5873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.6"	""	"82.3"	""	"72.3"	""	"197.1"	""	"189.5"	"67.7"	""	"365"	"39"	"32.000"	"25.000"	"0.00257788101893652"	"18"	"0.0001889"	"0.0006998"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFTLK"	"[R].gEAFTLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P06238; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"3"	"612.37280"	"1223.73833"	"1223.73999"	"-1.36"	"-0.00083"	"12/54"	"12"	"54"	"4880355.05804443"	"HCD"	"MS2"	"18.35347"	"484.1"	"100.000"	"39.8518"	"10717"	"10717"	"10693"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"825.4"	""	"773.4"	""	"685.2"	""	"842.1"	""	"709.6"	"737.9"	""	"283"	"21"	"31.000"	"24.000"	"0.100636712181946"	""	"0.0008731"	"0.0093"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFTLK"	"[R].gEAFTLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P06238; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"408.58432"	"1223.73841"	"1223.73999"	"-1.30"	"-0.00053"	"5/54"	"5"	"54"	"4026610.90301514"	"HCD"	"MS2"	"31.42873"	"220.9"	"100.000"	"39.7390"	"10714"	"10714"	"10686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"381.2"	""	"341.8"	"2.3"	"316.3"	""	"356.4"	""	"327.6"	"365.1"	""	"283"	"14"	"31.000"	"24.000"	"0.596700552351444"	"17"	"0.00373"	"0.08673"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFTLK"	"[R].gEAFTLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P06238; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"612.37292"	"1223.73857"	"1223.73999"	"-1.16"	"-0.00071"	"12/54"	"12"	"54"	"4994072.68884277"	"HCD"	"MS2"	"34.77384"	"481.3"	"100.000"	"39.9660"	"10805"	"10805"	"10781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"810.8"	""	"800.1"	""	"688.1"	""	"793.1"	"8.6"	"725.5"	"719.0"	""	"283"	"22"	"31.000"	"24.000"	"0.084480493051613"	""	"0.0006037"	"0.005314"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFTLK"	"[R].gEAFTLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P06238; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"612.37311"	"1223.73894"	"1223.73999"	"-0.86"	"-0.00053"	"6/54"	"6"	"54"	"78049679.3513184"	"HCD"	"MS2"	"1.028176"	"1142.5"	"19.416"	"39.6339"	"10671"	"10671"	"10654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2377.0"	""	"1968.2"	""	"1656.3"	""	"2096.4"	""	"1233.7"	"1423.1"	""	"283"	"32"	"31.000"	"24.000"	"0.00819891605444037"	""	"0.004346"	"0.1221"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFTLK"	"[R].gEAFTLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P06238; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"612.37311"	"1223.73894"	"1223.73999"	"-0.86"	"-0.00053"	"6/54"	"6"	"54"	"65866737.3242188"	"HCD"	"MS2"	"0.779589"	"1850.7"	"34.730"	"39.5245"	"10583"	"10583"	"10566"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3779.4"	""	"3155.8"	""	"2689.0"	""	"3402.2"	""	"2077.9"	"2333.5"	""	"283"	"32"	"31.000"	"24.000"	"0.00848704372901546"	""	"0.003635"	"0.08493"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLIGMTK"	"[K].sLIGmTk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"612.37402"	"1223.74077"	"1223.74337"	"-2.12"	"-0.00130"	"5/58"	"5"	"58"	"4125177.08068848"	"HCD"	"MS2"	"0"	"283.7"	"100.000"	"33.5981"	"8155"	"8155"	"8135"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.4"	""	"379.2"	""	"367.2"	""	"610.1"	""	"522.1"	"482.0"	""	"279"	"18"	"31.000"	"24.000"	"0.245230344147237"	"21"	"0.003448"	"0.07738"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLIGMTK"	"[K].sLIGmTk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"612.37415"	"1223.74101"	"1223.74337"	"-1.92"	"-0.00118"	"5/58"	"5"	"58"	"4207780.36053467"	"HCD"	"MS2"	"0"	"288.0"	"100.000"	"33.6487"	"8219"	"8219"	"8196"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.3"	""	"372.8"	""	"385.1"	""	"599.6"	""	"521.0"	"497.3"	""	"279"	"16"	"31.000"	"24.000"	"0.316646146837793"	"21"	"0.004726"	"0.1363"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHELIITR"	"[K].lHELIITR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"408.59375"	"1223.76670"	"1223.76732"	"-0.51"	"-0.00021"	"6/64"	"6"	"64"	"2924337.59881592"	"HCD"	"MS2"	"38.69218"	"102.8"	"100.000"	"35.9529"	"9160"	"9160"	"9129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.3"	""	"153.0"	""	"150.3"	""	"155.8"	"2.2"	"180.6"	"172.3"	""	"132"	"20"	"28.000"	"21.000"	"0.0592303004370494"	"14"	"0.0005564"	"0.003298"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWSLVTFR"	"[R].sWSLVTFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"612.85114"	"1224.69499"	"1224.69382"	"0.96"	"0.00058"	"6/66"	"6"	"66"	"5810173.89093018"	"HCD"	"MS2"	"45.79774"	"313.8"	"100.000"	"55.2816"	"16976"	"16976"	"16955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.3"	""	"446.9"	""	"481.2"	""	"376.2"	""	"620.5"	"654.4"	""	"480"	"11"	"33.000"	"26.000"	"1.88023114263891"	"20"	"0.0004166"	"0.002433"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSMLGTK"	"[R].gGSmLGTk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"612.85400"	"1224.70073"	"1224.70223"	"-1.22"	"-0.00075"	"6/64"	"6"	"64"	"978503.047180176"	"HCD"	"MS2"	"0"	"65.6"	"100.000"	"26.3461"	"5244"	"5244"	"5218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.1"	""	"89.5"	""	"95.8"	""	"115.5"	"3.2"	"117.6"	"105.3"	""	"471"	"9"	"33.000"	"26.000"	"3.02685008416721"	"14"	"0.004977"	"0.149"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGMTPSK"	"[K].fGMTPSk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"613.35376"	"1225.70024"	"1225.70150"	"-1.03"	"-0.00063"	"6/52"	"6"	"52"	"37687054.4572754"	"HCD"	"MS2"	"37.69507"	"661.2"	"20.949"	"37.0790"	"9579"	"9579"	"9562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"942.1"	""	"897.5"	""	"928.4"	""	"966.6"	""	"1246.7"	"1292.7"	""	"445"	"34"	"33.000"	"26.000"	"0.00834314929996201"	"25"	"0.004007"	"0.1027"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGMTPSK"	"[K].fGMTPSk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"613.35413"	"1225.70098"	"1225.70150"	"-0.43"	"-0.00026"	"6/52"	"6"	"52"	"42542988.6523438"	"HCD"	"MS2"	"48.38309"	"768.1"	"23.490"	"37.1632"	"9656"	"9656"	"9638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1107.6"	""	"1061.5"	""	"1042.7"	""	"1141.4"	"4.6"	"1459.7"	"1463.0"	""	"454"	"31"	"33.000"	"26.000"	"0.0173790429768855"	"24"	"0.004291"	"0.1112"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSYSLAK"	"[K].vSYSLAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62638"	"Golgi apparatus protein 1 OS=Rattus norvegicus OX=10116 GN=Glg1 PE=1 SV=1"	"Q62638"	"Golgi apparatus protein 1 OS=Rattus norvegicus OX=10116 GN=Glg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"613.38092"	"1225.75456"	"1225.75564"	"-0.88"	"-0.00054"	"5/52"	"5"	"52"	"3634645.07037354"	"HCD"	"MS2"	"34.82609"	"373.9"	"100.000"	"37.3768"	"9701"	"9701"	"9672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"537.1"	""	"503.1"	""	"540.6"	""	"572.0"	""	"696.0"	"700.6"	""	"205"	"12"	"30.000"	"23.000"	"0.69139122839037"	"17"	"0.001783"	"0.0248"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAAHIK"	"[K].dIAAHIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63170"	"Dynein light chain 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll1 PE=1 SV=1"	"P63170"	"Dynein light chain 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"409.26001"	"1225.76548"	"1225.76688"	"-1.14"	"-0.00047"	"5/48"	"5"	"48"	"19774779.7860718"	"HCD"	"MS2"	"30.10034"	"670.2"	"67.930"	"30.9285"	"7069"	"7069"	"7048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"813.0"	""	"790.0"	""	"877.7"	""	"1015.7"	""	"1585.6"	"1296.8"	""	"160"	"18"	"29.000"	"22.000"	"0.116436726446557"	"14"	"0.001966"	"0.03078"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAAHIK"	"[K].dIAAHIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63170"	"Dynein light chain 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll1 PE=1 SV=1"	"P63170"	"Dynein light chain 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"409.26038"	"1225.76657"	"1225.76688"	"-0.25"	"-0.00010"	"5/48"	"5"	"48"	"18408645.1622314"	"HCD"	"MS2"	"32.69624"	"865.7"	"97.044"	"31.0088"	"7144"	"7144"	"7120"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1057.0"	""	"1019.5"	""	"1112.5"	""	"1326.5"	""	"1978.5"	"1735.6"	""	"159"	"18"	"29.000"	"22.000"	"0.117048843943401"	"14"	"0.002361"	"0.03465"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKAHGKK"	"[K].VkAHGKk.[V]"	"K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"2"	"3"	"3"	"0.2105"	"0.0000"	"1"	"1"	"1"	"409.27585"	"1225.81299"	"1225.81450"	"-1.23"	"-0.00050"	"5/60"	"5"	"60"	"2136356.98895264"	"HCD"	"MS2"	"23.84385"	"144.9"	"100.000"	"18.6063"	"2282"	"2282"	"2273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.7"	""	"164.2"	""	"188.3"	""	"277.1"	""	"306.2"	"257.2"	""	"48"	"19"	"23.000"	"16.000"	"0.0314927975764609"	"14"	"0.003945"	"0.1007"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKAHGKK"	"[K].vKAHGKk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"2"	"3"	"3"	"0.2105"	"0.0000"	"1"	"2"	"2"	"409.27585"	"1225.81299"	"1225.81450"	"-1.23"	"-0.00050"	"5/60"	"5"	"60"	"2136356.98895264"	"HCD"	"MS2"	"23.84385"	"144.9"	"100.000"	"18.6063"	"2282"	"2282"	"2273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.7"	""	"164.2"	""	"188.3"	""	"277.1"	""	"306.2"	"257.2"	""	"48"	"19"	"23.000"	"16.000"	"0.0314927975764609"	"14"	"0.0009404"	"0.009938"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKAHGKK"	"[K].vKAHGKk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"2"	"3"	"3"	"0.4211"	"0.0000"	"1"	"1"	"1"	"409.27597"	"1225.81336"	"1225.81450"	"-0.93"	"-0.00038"	"10/60"	"10"	"60"	"2061879.66516113"	"HCD"	"MS2"	"17.61031"	"142.4"	"100.000"	"18.5852"	"2251"	"2251"	"2244"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.8"	""	"166.4"	""	"187.0"	""	"265.2"	""	"284.5"	"261.4"	""	"48"	"19"	"23.000"	"16.000"	"0.0288543464308179"	"14"	"0.001686"	"0.023"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKAHGKK"	"[K].VkAHGKk.[V]"	"K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"2"	"3"	"3"	"0.4211"	"0.0000"	"1"	"2"	"2"	"409.27597"	"1225.81336"	"1225.81450"	"-0.93"	"-0.00038"	"5/60"	"5"	"60"	"2061879.66516113"	"HCD"	"MS2"	"17.61031"	"142.4"	"100.000"	"18.5852"	"2251"	"2251"	"2244"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.8"	""	"166.4"	""	"187.0"	""	"265.2"	""	"284.5"	"261.4"	""	"48"	"19"	"23.000"	"16.000"	"0.0319309060314742"	"14"	"0.002925"	"0.05058"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPTIPK"	"[K].vLPTIPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.41724"	"1225.82720"	"1225.82842"	"-1.00"	"-0.00061"	"6/48"	"6"	"48"	"13975876.1165771"	"HCD"	"MS2"	"10.09443"	"417.0"	"55.204"	"46.2161"	"13347"	"13347"	"13328"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"635.8"	""	"568.1"	""	"608.2"	""	"645.3"	"13.7"	"726.9"	"749.2"	""	"36"	"35"	"22.000"	"15.000"	"0.000558820725863104"	"15"	"0.005323"	"0.1629"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPTIPK"	"[K].vLPTIPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"409.28061"	"1225.82727"	"1225.82842"	"-0.93"	"-0.00038"	"6/48"	"6"	"48"	"2683619.70135498"	"HCD"	"MS2"	"25.10121"	"127.6"	"100.000"	"45.9222"	"13179"	"13179"	"13149"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"179.1"	""	"170.3"	""	"173.9"	""	"213.9"	"0.9"	"220.7"	"250.4"	""	"36"	"16"	"22.000"	"15.000"	"0.0492348370735208"	"14"	"0.002165"	"0.03266"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPTIPK"	"[K].vLPTIPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.41766"	"1225.82805"	"1225.82842"	"-0.30"	"-0.00018"	"6/48"	"6"	"48"	"12398979.4281616"	"HCD"	"MS2"	"6.494151"	"663.7"	"100.000"	"45.9359"	"13184"	"13184"	"13165"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"980.3"	""	"899.4"	""	"1001.4"	""	"1035.4"	"15.8"	"1135.8"	"1214.8"	""	"33"	"32"	"22.000"	"15.000"	"0.0010244339064796"	"15"	"0.006251"	"0.2253"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DASVVGFFR"	"[K].dASVVGFFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"613.83862"	"1226.66997"	"1226.67309"	"-2.54"	"-0.00156"	"7/68"	"7"	"68"	"3941399.28912354"	"HCD"	"MS2"	"0"	"185.1"	"100.000"	"50.2930"	"14958"	"14958"	"14940"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.4"	""	"241.5"	""	"223.7"	""	"346.1"	"8.0"	"355.1"	"364.1"	""	"551"	"32"	"34.000"	"27.000"	"0.0187551958320126"	"18"	"0.0001889"	"0.0004925"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DASVVGFFR"	"[K].dASVVGFFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"613.83972"	"1226.67217"	"1226.67309"	"-0.75"	"-0.00046"	"13/68"	"13"	"68"	"4832039.43682861"	"HCD"	"MS2"	"0"	"239.9"	"100.000"	"50.3456"	"14979"	"14979"	"14964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"319.5"	""	"312.0"	""	"306.9"	""	"434.3"	"13.6"	"447.5"	"439.9"	""	"543"	"33"	"34.000"	"27.000"	"0.0130247631304861"	"16"	"0.0003839"	"0.001583"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTGLQYLR"	"[R].fTGLQYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"613.85785"	"1226.70842"	"1226.70947"	"-0.86"	"-0.00053"	"6/62"	"6"	"62"	"31731816.4372559"	"HCD"	"MS2"	"0"	"463.3"	"30.321"	"49.8705"	"14837"	"14837"	"14814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"362.3"	""	"345.4"	""	"408.0"	""	"955.2"	""	"1105.4"	"1245.7"	""	"448"	"40"	"33.000"	"26.000"	"0.00214905741459569"	"18"	"0.0006037"	"0.005924"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTGLQYLR"	"[R].fTGLQYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"613.85858"	"1226.70989"	"1226.70947"	"0.34"	"0.00021"	"6/62"	"6"	"62"	"22405804.5154419"	"HCD"	"MS2"	"0"	"1196.7"	"100.000"	"49.6000"	"14680"	"14680"	"14655"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"855.2"	""	"860.4"	""	"1038.7"	""	"2491.3"	""	"2913.7"	"3277.2"	""	"412"	"37"	"33.000"	"26.000"	"0.0040819456731585"	"17"	"0.0006037"	"0.004991"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPHFQLSR"	"[R].lPHFQLSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z142"	"Transmembrane protein 33 OS=Rattus norvegicus OX=10116 GN=Tmem33 PE=2 SV=1"	"Q9Z142"	"Transmembrane protein 33 OS=Rattus norvegicus OX=10116 GN=Tmem33 PE=2 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"409.57761"	"1226.71827"	"1226.72071"	"-1.99"	"-0.00081"	"7/62"	"7"	"62"	"4453028.10803223"	"HCD"	"MS2"	"48.6963"	"114.3"	"100.000"	"38.5344"	"10176"	"10176"	"10151"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.7"	""	"154.7"	""	"161.4"	""	"174.2"	""	"220.1"	"218.0"	""	"426"	"24"	"33.000"	"26.000"	"0.0853846108546156"	"18"	"0.0001889"	"0.0004469"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPHFQLSR"	"[R].lPHFQLSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z142"	"Transmembrane protein 33 OS=Rattus norvegicus OX=10116 GN=Tmem33 PE=2 SV=1"	"Q9Z142"	"Transmembrane protein 33 OS=Rattus norvegicus OX=10116 GN=Tmem33 PE=2 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"409.57800"	"1226.71946"	"1226.72071"	"-1.02"	"-0.00042"	"7/62"	"7"	"62"	"3746363.03796387"	"HCD"	"MS2"	"65.37785"	"104.7"	"100.000"	"38.5769"	"10237"	"10237"	"10209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.0"	""	"135.9"	""	"158.7"	""	"164.6"	""	"178.9"	"210.6"	""	"387"	"24"	"32.000"	"25.000"	"0.0827334184703319"	"18"	"0.0001889"	"0.0004693"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLYLGDDR"	"[K].fLYLGDDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"614.33020"	"1227.65312"	"1227.65710"	"-3.24"	"-0.00199"	"5/58"	"5"	"58"	"9327045.49865723"	"HCD"	"MS2"	"27.42175"	"390.6"	"83.162"	"50.6057"	"15135"	"15135"	"15119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"595.1"	""	"551.0"	""	"526.0"	""	"656.6"	""	"685.5"	"685.1"	""	"493"	"38"	"33.000"	"26.000"	"0.00401621472045692"	"19"	"0.0001889"	"0.00109"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLYLGDDR"	"[K].fLYLGDDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"614.33093"	"1227.65459"	"1227.65710"	"-2.05"	"-0.00126"	"11/58"	"11"	"58"	"9839657.19854736"	"HCD"	"MS2"	"9.741852"	"521.0"	"100.000"	"50.4055"	"15003"	"15003"	"14984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"803.9"	""	"743.8"	""	"735.6"	""	"839.3"	"0.4"	"889.1"	"918.6"	""	"508"	"35"	"34.000"	"27.000"	"0.00717519513628589"	"19"	"0.0002277"	"0.001292"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLYLGDDR"	"[K].fLYLGDDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"614.33240"	"1227.65752"	"1227.65710"	"0.34"	"0.00021"	"7/58"	"7"	"58"	"2899823.44116211"	"HCD"	"MS2"	"40.51065"	"154.9"	"100.000"	"50.9936"	"15294"	"15294"	"15270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.4"	""	"207.7"	""	"219.9"	""	"248.5"	"1.4"	"283.5"	"271.2"	""	"500"	"10"	"33.000"	"26.000"	"2.49425015955638"	"19"	"0.0006037"	"0.004349"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDYVWLR"	"[R].fDYVWLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"614.33966"	"1227.67204"	"1227.67236"	"-0.26"	"-0.00016"	"4/48"	"4"	"48"	"1942781.18487549"	"HCD"	"MS2"	"0"	"113.0"	"100.000"	"63.1350"	"20233"	"20233"	"20211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.6"	""	"157.9"	""	"178.1"	""	"177.6"	"3.2"	"206.2"	"195.5"	""	"531"	"13"	"34.000"	"27.000"	"1.30636496723425"	"14"	"0.001007"	"0.01105"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"614.35388"	"1227.70049"	"1227.70472"	"-3.45"	"-0.00212"	"4/62"	"4"	"62"	"4547714.78100586"	"HCD"	"MS2"	"0"	"235.3"	"100.000"	"44.4263"	"12572"	"12572"	"12555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.4"	""	"309.8"	""	"304.1"	""	"400.8"	"1.1"	"449.0"	"457.5"	""	"468"	"9"	"33.000"	"26.000"	"2.66204784882683"	"18"	"0.004819"	"0.1413"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"614.35547"	"1227.70366"	"1227.70472"	"-0.87"	"-0.00053"	"5/62"	"5"	"62"	"4096763.99053955"	"HCD"	"MS2"	"21.11814"	"215.9"	"100.000"	"44.6603"	"12717"	"12717"	"12692"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.3"	""	"303.0"	""	"282.2"	""	"340.4"	""	"405.2"	"428.8"	""	"492"	"17"	"33.000"	"26.000"	"0.532028756836848"	"19"	"0.0003839"	"0.00207"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTYLTSK"	"[R].gTYLTSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"614.37091"	"1227.73454"	"1227.73491"	"-0.30"	"-0.00018"	"6/56"	"6"	"56"	"1724818.22894287"	"HCD"	"MS2"	"0"	"142.9"	"100.000"	"32.7398"	"7811"	"7811"	"7784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.5"	""	"162.0"	""	"171.0"	""	"267.7"	""	"294.5"	"299.0"	""	"335"	"6"	"32.000"	"25.000"	"3.8020236269054"	"17"	"0.00109"	"0.01478"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFAGYK"	"[K].aIFAGYk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"614.37848"	"1227.74968"	"1227.75017"	"-0.39"	"-0.00024"	"5/50"	"5"	"50"	"25477639.961731"	"HCD"	"MS2"	"25.39678"	"2073.3"	"100.000"	"42.6255"	"11847"	"11847"	"11820"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2839.4"	""	"2832.4"	""	"3029.7"	""	"3284.5"	""	"3865.6"	"3820.9"	""	"325"	"28"	"32.000"	"25.000"	"0.0255183955704202"	"18"	"0.001217"	"0.01672"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFAGYK"	"[K].aIFAGYk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"614.37854"	"1227.74980"	"1227.75017"	"-0.30"	"-0.00018"	"5/50"	"5"	"50"	"33870561.7435303"	"HCD"	"MS2"	"5.391171"	"1322.5"	"49.411"	"42.9116"	"12008"	"12008"	"11987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1782.4"	""	"1804.3"	""	"1930.3"	""	"2081.9"	"0.1"	"2458.6"	"2474.5"	""	"325"	"26"	"32.000"	"25.000"	"0.0411010924422499"	"17"	"0.001389"	"0.01915"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLAENLLR"	"[R].gLLAENLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"614.38397"	"1227.76067"	"1227.76224"	"-1.28"	"-0.00079"	"7/70"	"7"	"70"	"3036525.68096924"	"HCD"	"MS2"	"48.70735"	"182.0"	"100.000"	"52.7214"	"15951"	"15951"	"15922"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.0"	""	"208.4"	""	"214.8"	""	"329.0"	""	"393.4"	"375.5"	""	"276"	"16"	"31.000"	"24.000"	"0.324996801177649"	"20"	"0.0003839"	"0.001599"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLAENLLR"	"[R].gLLAENLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.38434"	"1227.76140"	"1227.76224"	"-0.68"	"-0.00042"	"7/70"	"7"	"70"	"19866130.4551392"	"HCD"	"MS2"	"4.748207"	"760.4"	"94.409"	"52.5109"	"15914"	"15914"	"15894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"609.5"	""	"594.0"	""	"590.5"	""	"1647.8"	"6.3"	"1932.0"	"1875.3"	""	"277"	"42"	"31.000"	"24.000"	"0.000953783430436823"	"15"	"0.0001889"	"0.0008835"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLAENLLR"	"[R].gLLAENLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.38446"	"1227.76164"	"1227.76224"	"-0.48"	"-0.00030"	"7/70"	"7"	"70"	"19732238.6020508"	"HCD"	"MS2"	"7.113289"	"719.0"	"84.931"	"52.3104"	"15782"	"15782"	"15762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"578.9"	""	"562.6"	""	"563.3"	""	"1521.9"	"6.8"	"1802.5"	"1825.4"	""	"253"	"42"	"31.000"	"24.000"	"0.000891436732243441"	"15"	"0.0001889"	"0.0008662"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLAENLLR"	"[R].gLLAENLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"614.38458"	"1227.76189"	"1227.76224"	"-0.28"	"-0.00017"	"7/70"	"7"	"70"	"4133693.30975342"	"HCD"	"MS2"	"43.03439"	"224.6"	"100.000"	"52.8694"	"16061"	"16061"	"16038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"230.9"	""	"223.1"	""	"249.2"	""	"430.0"	""	"505.4"	"500.5"	""	"253"	"17"	"31.000"	"24.000"	"0.269830181513042"	"22"	"0.0005564"	"0.003556"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVIAQK"	"[K].nPVIAQk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"614.39508"	"1227.78288"	"1227.78253"	"0.29"	"0.00018"	"9/62"	"9"	"62"	"1187929.58782959"	"HCD"	"MS2"	"44.22381"	"113.3"	"100.000"	"31.3603"	"7246"	"7246"	"7222"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.7"	""	"142.6"	""	"149.8"	""	"182.9"	"0.4"	"207.8"	"195.9"	""	"215"	"20"	"30.000"	"23.000"	"0.116254149764528"	"21"	"0.000494"	"0.002753"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIEILATR"	"[K].aLIEILATR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"614.89441"	"1228.78154"	"1228.78264"	"-0.89"	"-0.00055"	"6/72"	"6"	"72"	"9985663.52056885"	"HCD"	"MS2"	"27.5963"	"394.8"	"100.000"	"62.5062"	"19976"	"19976"	"19955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"515.5"	""	"597.8"	""	"624.8"	""	"634.4"	"4.6"	"653.8"	"705.2"	""	"371"	"41"	"32.000"	"25.000"	"0.00146670885493967"	"19"	"0.0001889"	"0.0004374"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIEILATR"	"[K].aLIEILATR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.89490"	"1228.78252"	"1228.78264"	"-0.10"	"-0.00006"	"6/72"	"6"	"72"	"10375989.25"	"HCD"	"MS2"	"22.59287"	"419.1"	"100.000"	"62.3809"	"19872"	"19872"	"19849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"546.7"	""	"649.5"	""	"669.5"	""	"677.1"	""	"671.0"	"754.0"	""	"284"	"37"	"31.000"	"24.000"	"0.00301500713604031"	"15"	"0.0001889"	"0.0007564"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIEILATR"	"[K].aLIEILATR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.89496"	"1228.78264"	"1228.78264"	"0.00"	"0.00000"	"6/72"	"6"	"72"	"33001790.9831543"	"HCD"	"MS2"	"0.2471767"	"304.7"	"25.503"	"62.6783"	"19994"	"19994"	"19977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"383.8"	""	"467.2"	""	"488.9"	""	"475.9"	""	"520.7"	"549.0"	""	"284"	"41"	"31.000"	"24.000"	"0.00105995723694229"	"15"	"0.0002277"	"0.001207"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIEILATR"	"[K].aLIEILATR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"614.89532"	"1228.78337"	"1228.78264"	"0.60"	"0.00037"	"7/72"	"7"	"72"	"31086045.5517578"	"HCD"	"MS2"	"0.3197206"	"326.5"	"28.921"	"62.8082"	"20100"	"20100"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"418.3"	""	"513.6"	""	"538.0"	""	"483.0"	""	"525.8"	"612.9"	""	"291"	"36"	"31.000"	"24.000"	"0.00330265335949096"	"17"	"0.0001889"	"0.001044"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIQVPSK"	"[K].vIQVPSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"410.27203"	"1228.80155"	"1228.80293"	"-1.12"	"-0.00046"	"7/56"	"7"	"56"	"17688897.2950439"	"HCD"	"MS2"	"22.04812"	"778.5"	"100.000"	"39.0912"	"10405"	"10405"	"10374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1082.6"	""	"1110.4"	""	"1154.5"	""	"1209.6"	""	"1415.5"	"1407.0"	""	"223"	"22"	"30.000"	"23.000"	"0.0738371401627464"	"18"	"0.00103"	"0.01281"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIQVPSK"	"[K].vIQVPSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"410.27216"	"1228.80191"	"1228.80293"	"-0.83"	"-0.00034"	"7/56"	"7"	"56"	"11840654.3259888"	"HCD"	"MS2"	"20.08485"	"536.7"	"100.000"	"39.1523"	"10473"	"10473"	"10446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"765.9"	""	"774.2"	""	"797.7"	""	"846.9"	""	"938.3"	"962.0"	""	"223"	"23"	"30.000"	"23.000"	"0.0562697346783334"	"21"	"0.003539"	"0.08206"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIQVPSK"	"[K].vIQVPSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"614.90479"	"1228.80229"	"1228.80293"	"-0.52"	"-0.00032"	"6/56"	"6"	"56"	"83543272.6376953"	"HCD"	"MS2"	"33.19099"	"728.0"	"14.132"	"39.1393"	"10424"	"10424"	"10406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1075.6"	""	"1100.8"	""	"1128.7"	""	"1026.7"	""	"1278.4"	"1281.4"	""	"220"	"34"	"30.000"	"23.000"	"0.00456449446897799"	"18"	"0.007843"	"0.3121"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIQVPSK"	"[K].vIQVPSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"410.27255"	"1228.80310"	"1228.80293"	"0.14"	"0.00006"	"6/56"	"6"	"56"	"1564666.93151855"	"HCD"	"MS2"	"0"	"98.9"	"100.000"	"39.4396"	"10548"	"10548"	"10518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.8"	""	"140.1"	""	"139.8"	""	"155.9"	"0.2"	"178.0"	"192.1"	""	"204"	"16"	"30.000"	"23.000"	"0.262784758014263"	"16"	"0.001966"	"0.02914"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIQVPSK"	"[K].vIQVPSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"614.90527"	"1228.80327"	"1228.80293"	"0.28"	"0.00017"	"6/56"	"6"	"56"	"71261718.4650879"	"HCD"	"MS2"	"36.65231"	"966.7"	"20.980"	"39.2051"	"10495"	"10495"	"10478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1420.4"	""	"1575.0"	""	"1571.6"	""	"1312.1"	""	"1639.2"	"1632.1"	""	"204"	"34"	"30.000"	"23.000"	"0.00430130433497154"	"18"	"0.002651"	"0.03955"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLILGK"	"[RK].nLLILGk.[VT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	""	""	"P57097"	"Tyrosine-protein kinase Mer OS=Rattus norvegicus OX=10116 GN=Mertk PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"614.92273"	"1228.83818"	"1228.83932"	"-0.92"	"-0.00057"	"12/62"	"12"	"62"	"1658458.48529053"	"HCD"	"MS2"	"0"	"125.6"	"100.000"	"54.2311"	"16600"	"16600"	"16577"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.7"	""	"161.9"	""	"186.4"	""	"189.5"	""	"237.9"	"233.3"	""	"73"	"37"	"25.000"	"18.000"	"0.000700314090344655"	"18"	"0.0005564"	"0.003341"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLLLGK"	"[RK].nLLLLGk.[VT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4G069"	"Regulator of microtubule dynamics protein 1 OS=Rattus norvegicus OX=10116 GN=Rmdn1 PE=2 SV=1"	"Q4G069"	"Regulator of microtubule dynamics protein 1 OS=Rattus norvegicus OX=10116 GN=Rmdn1 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"614.92273"	"1228.83818"	"1228.83932"	"-0.92"	"-0.00057"	"12/62"	"12"	"62"	"1658458.48529053"	"HCD"	"MS2"	"0"	"125.6"	"100.000"	"54.2311"	"16600"	"16600"	"16577"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.7"	""	"161.9"	""	"186.4"	""	"189.5"	""	"237.9"	"233.3"	""	"73"	"37"	"25.000"	"18.000"	"0.000700314090344655"	"18"	"0.0005564"	"0.003341"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLWESYR"	"[K].fLWESYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"615.32788"	"1229.64849"	"1229.65162"	"-2.55"	"-0.00157"	"5/50"	"5"	"50"	"3775494.44842529"	"HCD"	"MS2"	"0"	"270.5"	"100.000"	"53.2165"	"16147"	"16147"	"16138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"368.3"	""	"346.0"	""	"383.5"	""	"442.1"	""	"519.1"	"509.2"	""	"465"	"17"	"33.000"	"26.000"	"0.519305541808099"	"18"	"0.00274"	"0.04423"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLWESYR"	"[K].fLWESYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"615.32843"	"1229.64958"	"1229.65162"	"-1.66"	"-0.00102"	"5/50"	"5"	"50"	"3842864.69952393"	"HCD"	"MS2"	"0"	"243.1"	"100.000"	"53.4799"	"16305"	"16305"	"16288"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.3"	""	"339.2"	""	"367.5"	""	"397.3"	"2.2"	"423.2"	"427.2"	""	"506"	"16"	"34.000"	"27.000"	"0.687259135016288"	"19"	"0.001007"	"0.0111"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDTTGK"	"[R].iHDTTGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.36548"	"1229.72368"	"1229.72541"	"-1.40"	"-0.00086"	"6/52"	"6"	"52"	"271212.297058105"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"23.8675"	"4271"	"4271"	"4245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.4"	""	"24.5"	""	"26.3"	""	"47.6"	"0.5"	"51.6"	"40.3"	""	"624"	"26"	"34.000"	"27.000"	"0.0869269804612488"	"14"	"0.0003839"	"0.001629"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSIGDGIAR"	"[R].vLSIGDGIAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"615.37335"	"1229.73943"	"1229.74150"	"-1.69"	"-0.00104"	"8/78"	"8"	"78"	"4313814.16986084"	"HCD"	"MS2"	"0"	"205.6"	"100.000"	"44.2249"	"12490"	"12490"	"12470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.0"	""	"297.3"	""	"330.2"	""	"305.9"	"0.4"	"383.0"	"365.0"	""	"660"	"54"	"35.000"	"28.000"	"0.000120646281232331"	"26"	"0"	"6.742E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSIGDGIAR"	"[R].vLSIGDGIAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"615.37402"	"1229.74077"	"1229.74150"	"-0.60"	"-0.00037"	"8/78"	"8"	"78"	"4550021.03277588"	"HCD"	"MS2"	"17.14898"	"226.4"	"100.000"	"44.4060"	"12614"	"12614"	"12588"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.6"	""	"339.9"	""	"347.6"	""	"328.4"	""	"408.8"	"427.3"	""	"657"	"42"	"35.000"	"28.000"	"0.0019477596912453"	"22"	"0"	"7.817E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNLDSIIGR"	"[K].lNLDSIIGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"615.37433"	"1229.74138"	"1229.74150"	"-0.10"	"-0.00006"	"8/80"	"8"	"80"	"13630199.2523804"	"HCD"	"MS2"	"28.09372"	"431.9"	"78.772"	"59.0948"	"18583"	"18583"	"18565"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"655.9"	""	"616.3"	""	"657.9"	""	"629.7"	"7.0"	"733.3"	"787.1"	""	"602"	"24"	"34.000"	"27.000"	"0.132912704653347"	"26"	"0.0001889"	"0.001024"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNLDSIIGR"	"[K].lNLDSIIGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"615.37457"	"1229.74187"	"1229.74150"	"0.30"	"0.00018"	"8/80"	"8"	"80"	"13145881.1435547"	"HCD"	"MS2"	"27.71446"	"451.7"	"91.096"	"58.9588"	"18475"	"18475"	"18457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"674.1"	""	"645.7"	""	"671.6"	""	"639.0"	"8.5"	"796.3"	"841.9"	""	"602"	"29"	"34.000"	"27.000"	"0.0342425813032852"	"27"	"0.0001889"	"0.0006527"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLDSVK"	"[K].lPLDSVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"615.39636"	"1229.78545"	"1229.78695"	"-1.22"	"-0.00075"	"6/50"	"6"	"50"	"8056419.04089355"	"HCD"	"MS2"	"0"	"348.7"	"60.542"	"42.8065"	"11921"	"11921"	"11900"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"485.9"	""	"494.0"	""	"518.9"	""	"520.7"	""	"651.1"	"634.8"	""	"383"	"22"	"32.000"	"25.000"	"0.131876914749929"	"20"	"0.0008731"	"0.009007"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFPFHQR"	"[K].gLFPFHQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"410.90247"	"1230.69284"	"1230.69449"	"-1.34"	"-0.00055"	"6/60"	"6"	"60"	"19841889.1767578"	"HCD"	"MS2"	"11.56263"	"223.2"	"100.000"	"36.7182"	"9474"	"9474"	"9446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.0"	""	"377.7"	""	"287.8"	""	"360.3"	""	"422.3"	"380.7"	""	"784"	"31"	"35.000"	"28.000"	"0.0285289683378435"	"15"	"0.0002277"	"0.001346"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFPFHQR"	"[K].gLFPFHQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"410.90262"	"1230.69330"	"1230.69449"	"-0.97"	"-0.00040"	"7/60"	"7"	"60"	"38883518.244873"	"HCD"	"MS2"	"3.749404"	"231.2"	"60.527"	"36.6614"	"9407"	"9407"	"9386"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"291.3"	""	"385.6"	""	"307.0"	""	"373.8"	""	"428.9"	"407.2"	""	"783"	"41"	"35.000"	"28.000"	"0.00290891992486558"	"18"	"0.0002723"	"0.001375"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFNALIHR"	"[K].mFNALIHR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"410.90372"	"1230.69660"	"1230.69786"	"-1.03"	"-0.00042"	"8/68"	"8"	"68"	"3690238.83538818"	"HCD"	"MS2"	"48.01078"	"82.1"	"100.000"	"39.8083"	"10699"	"10699"	"10677"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.8"	""	"116.0"	""	"117.9"	""	"130.7"	""	"159.7"	"163.1"	""	"718"	"27"	"35.000"	"28.000"	"0.0671574888391322"	"14"	"0.0003839"	"0.001616"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFNALIHR"	"[K].mFNALIHR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"410.90378"	"1230.69678"	"1230.69786"	"-0.88"	"-0.00036"	"8/68"	"8"	"68"	"3559947.51300049"	"HCD"	"MS2"	"45.68822"	"77.0"	"100.000"	"39.9316"	"10791"	"10791"	"10765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.3"	""	"93.5"	""	"109.1"	""	"122.7"	""	"139.7"	"160.6"	""	"716"	"27"	"35.000"	"28.000"	"0.0702882979107305"	"14"	"0.0001889"	"0.0003771"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFQIHTSR"	"[R].iFQIHTSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"410.90955"	"1230.71408"	"1230.71562"	"-1.25"	"-0.00051"	"7/68"	"7"	"68"	"9789475.61175537"	"HCD"	"MS2"	"100"	"487.5"	"95.091"	"33.2142"	"8004"	"8004"	"7993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"599.8"	""	"607.1"	""	"683.9"	""	"860.3"	""	"926.6"	"950.7"	""	"817"	"6"	"36.000"	"29.000"	"11.0966544132077"	"16"	"0.0002277"	"0.00121"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVGAANK"	"[K].aAAVGAANk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"615.88147"	"1230.75566"	"1230.75704"	"-1.12"	"-0.00069"	"7/68"	"7"	"68"	"4895091.23803711"	"HCD"	"MS2"	"40.34657"	"346.2"	"100.000"	"26.7107"	"5393"	"5393"	"5369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"480.6"	""	"446.2"	""	"426.7"	""	"626.3"	""	"612.9"	"691.2"	""	"610"	"47"	"34.000"	"27.000"	"0.00062849212354735"	""	"0"	"0.0001558"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVGAANK"	"[K].aAAVGAANk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"615.88153"	"1230.75578"	"1230.75704"	"-1.02"	"-0.00063"	"10/68"	"10"	"68"	"270636.203125"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"26.9904"	"5507"	"5507"	"5491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.0"	""	"31.1"	""	"28.2"	""	"41.0"	""	"43.2"	"44.7"	""	"610"	"15"	"34.000"	"27.000"	"1.00069064399501"	"18"	"0.0004166"	"0.002389"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVGAANK"	"[K].aAAVGAANk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"615.88196"	"1230.75664"	"1230.75704"	"-0.33"	"-0.00020"	"7/68"	"7"	"68"	"5304673.56658936"	"HCD"	"MS2"	"30.93485"	"383.2"	"100.000"	"26.8104"	"5470"	"5470"	"5452"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"518.4"	""	"477.5"	""	"488.9"	""	"703.7"	""	"684.1"	"763.9"	""	"609"	"51"	"34.000"	"27.000"	"0.000246937642116495"	""	"0"	"0.0001423"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEIIASR"	"[K].vLTEIIASR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"615.88373"	"1230.76018"	"1230.76190"	"-1.40"	"-0.00086"	"8/74"	"8"	"74"	"67353785.8833008"	"HCD"	"MS2"	"1.014974"	"262.1"	"9.940"	"50.9704"	"15235"	"15235"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.1"	""	"320.4"	""	"403.2"	""	"463.6"	""	"470.5"	"519.0"	""	"660"	"39"	"35.000"	"28.000"	"0.00434024194623438"	"22"	"0.0003839"	"0.001785"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEIIASR"	"[K].vLTEIIASR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"615.88379"	"1230.76030"	"1230.76190"	"-1.30"	"-0.00080"	"7/74"	"7"	"74"	"11640841.2565918"	"HCD"	"MS2"	"42.36336"	"511.4"	"100.000"	"50.8674"	"15242"	"15242"	"15222"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"591.7"	""	"662.3"	""	"761.5"	""	"903.0"	""	"912.1"	"1018.6"	""	"660"	"38"	"35.000"	"28.000"	"0.00584135956244748"	"25"	"0.0001889"	"0.0006724"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEIIASR"	"[K].vLTEIIASR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"615.88416"	"1230.76103"	"1230.76190"	"-0.71"	"-0.00043"	"7/74"	"7"	"74"	"11328513.0970459"	"HCD"	"MS2"	"26.85922"	"487.4"	"100.000"	"50.6578"	"15107"	"15107"	"15090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"603.2"	""	"600.8"	""	"726.1"	""	"864.0"	"3.7"	"856.0"	"965.0"	""	"658"	"38"	"35.000"	"28.000"	"0.00583708339212865"	"27"	"0.0001889"	"0.0004447"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEIIASR"	"[K].vLTEIIASR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"615.88446"	"1230.76164"	"1230.76190"	"-0.21"	"-0.00013"	"7/74"	"7"	"74"	"67455939.5297852"	"HCD"	"MS2"	"0.577956"	"322.7"	"12.476"	"51.1707"	"15367"	"15367"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"389.5"	""	"413.6"	""	"475.6"	""	"567.8"	""	"575.0"	"642.6"	""	"499"	"41"	"33.000"	"26.000"	"0.00215313147667859"	"23"	"0.0003571"	"0.001513"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGIVNK"	"[R].lEGIVNk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"615.89398"	"1230.78069"	"1230.78219"	"-1.22"	"-0.00075"	"6/50"	"6"	"50"	"9621600.83862305"	"HCD"	"MS2"	"31.97603"	"748.4"	"100.000"	"40.8365"	"11117"	"11117"	"11093"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1087.0"	""	"1048.8"	""	"1060.3"	""	"1183.8"	""	"1340.2"	"1369.9"	""	"407"	"31"	"33.000"	"26.000"	"0.0160163818202952"	"25"	"0.0006737"	"0.006483"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQSTPVK"	"[K].iQSTPVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"615.89410"	"1230.78093"	"1230.78219"	"-1.03"	"-0.00063"	"4/60"	"4"	"60"	"6446702.23931885"	"HCD"	"MS2"	"24.19591"	"412.9"	"91.337"	"31.2358"	"7195"	"7195"	"7174"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"551.5"	""	"537.1"	""	"577.1"	""	"678.4"	"4.0"	"783.0"	"782.7"	""	"407"	"20"	"33.000"	"26.000"	"0.205382962316605"	""	"0.0006037"	"0.004954"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQSTPVK"	"[K].iQSTPVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"615.89435"	"1230.78142"	"1230.78219"	"-0.63"	"-0.00039"	"6/60"	"6"	"60"	"7539272.10223389"	"HCD"	"MS2"	"45.79837"	"512.4"	"100.000"	"31.3231"	"7273"	"7273"	"7248"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"743.9"	""	"676.9"	""	"709.2"	""	"836.2"	"6.9"	"928.2"	"952.9"	""	"407"	"24"	"33.000"	"26.000"	"0.0812015676306959"	""	"0.0006037"	"0.005031"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGIVNK"	"[R].lEGIVNk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"615.89471"	"1230.78215"	"1230.78219"	"-0.03"	"-0.00002"	"6/50"	"6"	"50"	"8384724.31628418"	"HCD"	"MS2"	"22.32206"	"556.6"	"88.063"	"41.0568"	"11251"	"11251"	"11229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"839.9"	""	"764.8"	""	"787.1"	""	"867.6"	""	"1002.9"	"1009.5"	""	"383"	"31"	"32.000"	"25.000"	"0.0160756587418465"	"24"	"0.0008453"	"0.00838"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALALAVK"	"[K].sALALAVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"615.91199"	"1230.81670"	"1230.81858"	"-1.53"	"-0.00094"	"7/56"	"7"	"56"	"13001762.0554199"	"HCD"	"MS2"	"12.97108"	"836.8"	"100.000"	"42.2949"	"11755"	"11755"	"11742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1251.7"	""	"1109.2"	""	"1170.5"	""	"1356.9"	"1.1"	"1498.2"	"1537.1"	""	"183"	"52"	"29.000"	"22.000"	"5.61592234725787E-05"	""	"0.0003839"	"0.001653"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALALAVK"	"[K].sALALAVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"615.91205"	"1230.81682"	"1230.81858"	"-1.43"	"-0.00088"	"7/56"	"7"	"56"	"16074025.8994751"	"HCD"	"MS2"	"13.44067"	"642.1"	"63.099"	"42.0744"	"11621"	"11621"	"11607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"964.8"	""	"854.9"	""	"895.3"	""	"1029.1"	"3.9"	"1158.1"	"1174.8"	""	"183"	"52"	"29.000"	"22.000"	"5.6288683852953E-05"	""	"0.0001889"	"0.0009896"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIQGLK"	"[K].lTIQGLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"615.91223"	"1230.81719"	"1230.81858"	"-1.13"	"-0.00070"	"12/54"	"12"	"54"	"15702295.0007935"	"HCD"	"MS2"	"6.205514"	"768.3"	"69.483"	"45.4570"	"12991"	"12991"	"12980"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1463.2"	""	"1187.6"	""	"1134.2"	""	"1041.7"	""	"1178.7"	"1260.5"	""	"183"	"39"	"29.000"	"22.000"	"0.00113089190160173"	"20"	"0.001217"	"0.0166"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIQGLK"	"[K].lTIQGLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"615.91229"	"1230.81731"	"1230.81858"	"-1.03"	"-0.00064"	"6/54"	"6"	"54"	"7992013.33044434"	"HCD"	"MS2"	"0"	"436.6"	"78.705"	"45.7433"	"13105"	"13105"	"13091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"719.7"	""	"647.0"	""	"641.8"	""	"614.5"	"8.8"	"722.6"	"774.9"	""	"183"	"35"	"29.000"	"22.000"	"0.00282762032074994"	""	"0.00103"	"0.01285"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALALAVK"	"[K].sALALAVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"410.94400"	"1230.81745"	"1230.81858"	"-0.92"	"-0.00038"	"6/56"	"6"	"56"	"4802596.56427002"	"HCD"	"MS2"	"24.4956"	"237.7"	"100.000"	"42.1981"	"11672"	"11672"	"11644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.8"	""	"300.1"	""	"329.9"	""	"374.5"	"3.1"	"460.2"	"457.1"	""	"183"	"28"	"29.000"	"22.000"	"0.0130743797203766"	""	"0.0001889"	"0.0009241"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALALAVK"	"[K].sALALAVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"410.94403"	"1230.81754"	"1230.81858"	"-0.85"	"-0.00035"	"6/56"	"6"	"56"	"5389499.17272949"	"HCD"	"MS2"	"7.327015"	"241.0"	"100.000"	"42.4184"	"11806"	"11806"	"11779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"345.4"	""	"314.9"	""	"346.1"	""	"379.9"	"0.3"	"446.8"	"450.4"	""	"183"	"30"	"29.000"	"22.000"	"0.00917109292841279"	"22"	"0.0002277"	"0.001158"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIQGLK"	"[K].lTIQGLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"615.91248"	"1230.81767"	"1230.81858"	"-0.74"	"-0.00045"	"12/54"	"12"	"54"	"11031627.8269043"	"HCD"	"MS2"	"0"	"532.8"	"68.300"	"45.9502"	"13239"	"13239"	"13227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"951.6"	""	"764.6"	""	"818.3"	""	"722.7"	"1.9"	"876.8"	"900.4"	""	"183"	"39"	"29.000"	"22.000"	"0.00117063389330414"	""	"0.001058"	"0.01407"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQTIGK"	"[K].lLQTIGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"615.91333"	"1230.81938"	"1230.81858"	"0.65"	"0.00040"	"6/56"	"6"	"56"	"1811045.26293945"	"HCD"	"MS2"	"0"	"158.9"	"100.000"	"46.2665"	"13368"	"13368"	"13344"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"240.0"	""	"232.2"	""	"219.4"	""	"269.5"	""	"267.1"	"276.7"	""	"135"	"34"	"28.000"	"21.000"	"0.00266872468545986"	""	"0.0003839"	"0.001904"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGASTQAAQR"	"[K].iGASTQAAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"616.35065"	"1231.69402"	"1231.69561"	"-1.30"	"-0.00080"	"7/82"	"7"	"82"	"1659844.72027588"	"HCD"	"MS2"	"0"	"77.8"	"100.000"	"24.4489"	"4474"	"4474"	"4452"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.7"	""	"102.2"	""	"109.2"	""	"126.8"	"1.5"	"126.2"	"141.8"	""	"805"	"45"	"36.000"	"29.000"	"0.00126114750403702"	"21"	"0"	"4.449E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGASTQAAQR"	"[K].iGASTQAAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"616.35138"	"1231.69548"	"1231.69561"	"-0.11"	"-0.00007"	"7/82"	"7"	"82"	"1570387.02178955"	"HCD"	"MS2"	"0"	"76.3"	"100.000"	"24.4897"	"4525"	"4525"	"4501"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.2"	""	"92.0"	""	"117.4"	""	"133.5"	""	"134.0"	"143.3"	""	"793"	"48"	"35.000"	"28.000"	"0.000641568734925476"	"21"	"0"	"4.386E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILTQWDR"	"[K].aILTQWDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"616.35309"	"1231.69890"	"1231.69964"	"-0.60"	"-0.00037"	"4/68"	"4"	"68"	"4447378.30456543"	"HCD"	"MS2"	"39.16972"	"268.3"	"100.000"	"44.0408"	"12415"	"12415"	"12390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.0"	""	"363.8"	""	"372.9"	""	"439.4"	""	"515.1"	"499.8"	""	"944"	"19"	"36.000"	"29.000"	"0.538197899728872"	"16"	"0.0001889"	"0.00104"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGPIWNR"	"[R].iFGPIWNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"616.36078"	"1231.71428"	"1231.71489"	"-0.50"	"-0.00031"	"7/60"	"7"	"60"	"14429306.4354248"	"HCD"	"MS2"	"22.89841"	"567.8"	"84.664"	"59.1686"	"18614"	"18614"	"18597"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"785.2"	""	"821.6"	""	"853.9"	""	"877.4"	""	"1007.1"	"1036.3"	""	"868"	"20"	"36.000"	"29.000"	"0.456551453239279"	"19"	"0.0006037"	"0.003885"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGPIWNR"	"[R].iFGPIWNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"616.36090"	"1231.71453"	"1231.71489"	"-0.30"	"-0.00018"	"6/60"	"6"	"60"	"13232971.0585327"	"HCD"	"MS2"	"16.6767"	"478.1"	"81.082"	"59.0377"	"18507"	"18507"	"18489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"655.4"	""	"662.5"	""	"691.9"	""	"784.7"	""	"845.8"	"893.0"	""	"860"	"17"	"36.000"	"29.000"	"0.808106231225406"	"18"	"0.0006037"	"0.004257"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIVEMLER"	"[K].lIVEMLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"616.36676"	"1231.72624"	"1231.72816"	"-1.56"	"-0.00096"	"6/62"	"6"	"62"	"2936030.64892578"	"HCD"	"MS2"	"32.69868"	"168.8"	"100.000"	"63.8742"	"20482"	"20482"	"20457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.6"	""	"238.4"	""	"238.9"	""	"250.1"	"10.0"	"299.2"	"326.8"	""	"873"	"30"	"36.000"	"29.000"	"0.0438514792456519"	"20"	"0.0001889"	"0.0006251"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAVNADK"	"[K].vGAVNADk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"616.37354"	"1231.73979"	"1231.74106"	"-1.03"	"-0.00063"	"7/62"	"7"	"62"	"2022584.1585083"	"HCD"	"MS2"	"0"	"177.6"	"100.000"	"29.7686"	"6596"	"6596"	"6572"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"268.1"	""	"201.4"	""	"233.2"	""	"304.7"	""	"337.1"	"342.1"	""	"784"	"35"	"35.000"	"28.000"	"0.0130703153803188"	"25"	"0.0001859"	"0.0003504"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNNLLGK"	"[K].dNNLLGk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"616.37360"	"1231.73992"	"1231.74106"	"-0.93"	"-0.00057"	"10/58"	"10"	"58"	"6332641.09619141"	"HCD"	"MS2"	"25.36054"	"485.5"	"100.000"	"35.9346"	"9152"	"9152"	"9129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"854.4"	""	"621.4"	""	"646.0"	""	"789.7"	"7.0"	"821.8"	"852.8"	""	"792"	"30"	"35.000"	"28.000"	"0.0358670109955687"	"26"	"0.0005959"	"0.003671"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAVNADK"	"[K].vGAVNADk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"616.37396"	"1231.74065"	"1231.74106"	"-0.33"	"-0.00020"	"7/62"	"7"	"62"	"1795824.96966553"	"HCD"	"MS2"	"18.44456"	"150.1"	"100.000"	"29.8608"	"6675"	"6675"	"6650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.2"	""	"170.6"	""	"200.4"	""	"272.2"	""	"289.4"	"297.0"	""	"785"	"35"	"35.000"	"28.000"	"0.0132385268648606"	"25"	"0.0001889"	"0.0004499"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLDSVK"	"[R].iVLDSVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"616.40399"	"1231.80071"	"1231.80260"	"-1.53"	"-0.00094"	"6/50"	"6"	"50"	"8014587.52313232"	"HCD"	"MS2"	"0"	"599.3"	"100.000"	"42.9004"	"11958"	"11958"	"11945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"745.5"	""	"739.8"	""	"794.4"	""	"1126.6"	""	"1137.4"	"1145.2"	""	"290"	"35"	"31.000"	"24.000"	"0.00431884882267233"	""	"0.0009404"	"0.009727"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLDSVK"	"[R].iVLDSVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"616.40411"	"1231.80095"	"1231.80260"	"-1.33"	"-0.00082"	"12/50"	"12"	"50"	"9548305.9675293"	"HCD"	"MS2"	"0"	"730.1"	"100.000"	"43.1841"	"12119"	"12119"	"12105"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"925.4"	""	"872.5"	""	"980.4"	""	"1389.1"	""	"1381.9"	"1383.4"	""	"290"	"37"	"31.000"	"24.000"	"0.00300862460030962"	""	"0.0006037"	"0.005564"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLAVVK"	"[K].lMLAVVk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"616.41339"	"1231.81951"	"1231.82122"	"-1.39"	"-0.00086"	"12/50"	"12"	"50"	"5478735.41394043"	"HCD"	"MS2"	"20.97501"	"376.7"	"100.000"	"54.0753"	"16483"	"16483"	"16461"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"556.5"	""	"625.4"	""	"658.1"	""	"459.2"	"9.3"	"604.8"	"648.1"	""	"139"	"40"	"28.000"	"21.000"	"0.000657634827149226"	""	"0.0005564"	"0.003364"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLAVVK"	"[K].lMLAVVk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"616.41388"	"1231.82048"	"1231.82122"	"-0.60"	"-0.00037"	"12/50"	"12"	"50"	"7999368.28240967"	"HCD"	"MS2"	"4.29422"	"503.0"	"100.000"	"54.3641"	"16654"	"16654"	"16637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"738.0"	""	"835.9"	""	"874.7"	""	"619.9"	"5.4"	"822.5"	"859.6"	""	"139"	"40"	"28.000"	"21.000"	"0.000628036384237"	""	"0.0006037"	"0.004328"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLAVVK"	"[K].lMLAVVk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"616.41412"	"1231.82097"	"1231.82122"	"-0.20"	"-0.00013"	"6/50"	"6"	"50"	"7918636.29473877"	"HCD"	"MS2"	"10.03197"	"488.7"	"100.000"	"54.6604"	"16775"	"16775"	"16757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"692.0"	""	"765.0"	""	"871.3"	""	"618.7"	"0.3"	"787.4"	"887.0"	""	"135"	"36"	"28.000"	"21.000"	"0.00154277919227842"	""	"0.0007076"	"0.007166"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLAVVK"	"[K].lMLAVVk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"411.27863"	"1231.82132"	"1231.82122"	"0.08"	"0.00003"	"5/50"	"5"	"50"	"787675.375"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"54.3390"	"16591"	"16591"	"16570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.0"	""	"55.4"	""	"59.7"	""	"52.5"	""	"78.8"	"82.1"	""	"135"	"25"	"28.000"	"21.000"	"0.0231368255918854"	"20"	"0.000523"	"0.003071"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLAVVK"	"[K].lMLAVVk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"616.41431"	"1231.82134"	"1231.82122"	"0.09"	"0.00006"	"12/50"	"12"	"50"	"8169985.74407959"	"HCD"	"MS2"	"4.886862"	"507.4"	"100.000"	"54.3895"	"16611"	"16611"	"16593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"708.3"	""	"822.5"	""	"906.4"	""	"593.5"	""	"855.5"	"914.0"	""	"135"	"37"	"28.000"	"21.000"	"0.00139734541043395"	""	"0.0009727"	"0.01039"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLIILK"	"[K].sSLIILk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"616.42255"	"1231.83782"	"1231.83898"	"-0.95"	"-0.00058"	"6/50"	"6"	"50"	"17577588.1213379"	"HCD"	"MS2"	"4.466984"	"894.9"	"80.383"	"49.5457"	"14705"	"14705"	"14686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1217.4"	""	"1084.8"	""	"1287.2"	""	"1458.2"	"1.8"	"1704.7"	"1730.0"	""	"95"	"38"	"26.000"	"19.000"	"0.00067716360696104"	""	"0.002489"	"0.03735"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLIILK"	"[K].sSLIILk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"616.42285"	"1231.83843"	"1231.83898"	"-0.45"	"-0.00028"	"6/50"	"6"	"50"	"15434108.3929443"	"HCD"	"MS2"	"4.923332"	"1011.7"	"100.000"	"49.2637"	"14546"	"14546"	"14527"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1323.1"	""	"1283.2"	""	"1452.3"	""	"1684.7"	"8.1"	"1874.9"	"1964.1"	""	"65"	"38"	"25.000"	"18.000"	"0.000479604623314666"	""	"0.003286"	"0.07008"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNPFPK"	"[R].gDNPFPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"616.85712"	"1232.70696"	"1232.70394"	"2.44"	"0.00151"	"7/56"	"7"	"56"	"3121907.56610107"	"HCD"	"MS2"	"18.44479"	"304.3"	"100.000"	"35.1275"	"8778"	"8778"	"8750"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"445.0"	""	"464.2"	""	"458.7"	""	"447.2"	""	"525.6"	"540.7"	""	"848"	"12"	"36.000"	"29.000"	"2.61436280789268"	"19"	"0.003286"	"0.06818"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALQLSK"	"[K].dALQLSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"616.88373"	"1232.76018"	"1232.76146"	"-1.04"	"-0.00064"	"6/64"	"6"	"64"	"3971858.19842529"	"HCD"	"MS2"	"20.70208"	"311.4"	"100.000"	"37.4867"	"9746"	"9746"	"9720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"367.6"	""	"327.4"	""	"328.7"	""	"577.6"	"2.4"	"674.9"	"681.7"	""	"486"	"29"	"33.000"	"26.000"	"0.028093527485268"	"25"	"0.000523"	"0.002846"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALQLSK"	"[K].dALQLSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"616.88403"	"1232.76079"	"1232.76146"	"-0.54"	"-0.00033"	"6/64"	"6"	"64"	"5718326.0324707"	"HCD"	"MS2"	"15.29376"	"444.2"	"100.000"	"37.5410"	"9811"	"9811"	"9793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"472.3"	""	"430.9"	""	"406.4"	""	"853.3"	""	"1060.5"	"1008.4"	""	"480"	"34"	"33.000"	"26.000"	"0.0105976907364795"	"25"	"0.000494"	"0.002645"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTGGADK"	"[K].iLTGGADk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"616.88416"	"1232.76103"	"1232.76146"	"-0.34"	"-0.00021"	"7/64"	"7"	"64"	"5713479.01477051"	"HCD"	"MS2"	"0"	"445.1"	"100.000"	"35.4741"	"8963"	"8963"	"8938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"593.9"	""	"522.0"	""	"543.1"	""	"770.3"	"1.3"	"900.9"	"892.4"	""	"444"	"27"	"33.000"	"26.000"	"0.0477917545108811"	""	"0.0003146"	"0.001437"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTGGADK"	"[K].iLTGGADk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"616.88422"	"1232.76116"	"1232.76146"	"-0.25"	"-0.00015"	"7/64"	"7"	"64"	"5271541.83782959"	"HCD"	"MS2"	"0"	"457.7"	"100.000"	"35.4278"	"8901"	"8901"	"8875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"584.4"	""	"526.6"	""	"564.5"	""	"785.2"	""	"941.6"	"944.0"	""	"444"	"20"	"33.000"	"26.000"	"0.210064649823206"	"25"	"0.0001889"	"0.001097"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTIPTK"	"[R].nTTIPTk.[QK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"3"	"P63018; P48721; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P48721; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"616.88428"	"1232.76128"	"1232.76146"	"-0.15"	"-0.00009"	"5/68"	"5"	"68"	"10401833.6251221"	"HCD"	"MS2"	"1.956431"	"619.8"	"100.000"	"30.7614"	"7003"	"7003"	"6984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"957.4"	""	"824.9"	""	"848.9"	""	"966.6"	"1.7"	"1108.7"	"1161.7"	""	"444"	"27"	"33.000"	"26.000"	"0.0397514499595836"	"26"	"0.0006037"	"0.005132"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTIPTK"	"[R].nTTIPTk.[QK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"3"	"P63018; P48721; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P48721; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"616.88434"	"1232.76140"	"1232.76146"	"-0.05"	"-0.00003"	"4/68"	"4"	"68"	"12989426.7957764"	"HCD"	"MS2"	"5.123348"	"411.8"	"56.856"	"30.8372"	"7075"	"7075"	"7056"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"634.1"	""	"543.5"	""	"571.4"	""	"631.0"	""	"744.5"	"777.2"	""	"444"	"24"	"33.000"	"26.000"	"0.085971197172599"	"25"	"0.0009727"	"0.01051"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIVTGASK"	"[K].vIVTGASk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"616.90179"	"1232.79631"	"1232.79784"	"-1.24"	"-0.00077"	"12/62"	"12"	"62"	"4803172.61273193"	"HCD"	"MS2"	"0"	"352.1"	"100.000"	"33.9556"	"8344"	"8344"	"8330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"434.7"	""	"521.8"	""	"508.1"	""	"574.4"	"1.2"	"653.1"	"643.6"	""	"245"	"39"	"30.000"	"23.000"	"0.00140648818633368"	"20"	"0.0001889"	"0.0007545"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIVTGASK"	"[K].vIVTGASk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"616.90240"	"1232.79753"	"1232.79784"	"-0.25"	"-0.00016"	"7/62"	"7"	"62"	"4973192.83343506"	"HCD"	"MS2"	"0"	"371.8"	"100.000"	"33.9052"	"8280"	"8280"	"8264"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"462.5"	""	"545.9"	""	"522.8"	""	"617.3"	"2.5"	"675.0"	"697.7"	""	"192"	"37"	"29.000"	"22.000"	"0.00207143463278656"	"18"	"0.0002277"	"0.001181"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLNVK"	"[K].lTSLNVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"616.90259"	"1232.79790"	"1232.79784"	"0.04"	"0.00003"	"12/54"	"12"	"54"	"26713878.0402832"	"HCD"	"MS2"	"11.40913"	"703.7"	"38.758"	"40.5010"	"11023"	"11023"	"11005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1006.7"	""	"839.8"	""	"800.5"	""	"1239.3"	""	"1394.6"	"1408.4"	""	"192"	"38"	"29.000"	"22.000"	"0.00138762217991609"	""	"0.001912"	"0.02714"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLNVK"	"[K].lTSLNVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"616.90265"	"1232.79802"	"1232.79784"	"0.14"	"0.00009"	"12/54"	"12"	"54"	"32617440.5831299"	"HCD"	"MS2"	"5.614098"	"817.2"	"34.713"	"40.3896"	"10934"	"10934"	"10917"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1148.9"	""	"972.7"	""	"945.2"	""	"1434.9"	""	"1584.6"	"1676.1"	""	"192"	"37"	"29.000"	"22.000"	"0.00211480940453132"	""	"0.001158"	"0.01544"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANSPDGK"	"[K].sANSPDGk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"617.34540"	"1233.68352"	"1233.68394"	"-0.34"	"-0.00021"	"5/76"	"5"	"76"	"272331.964904785"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"22.8868"	"3852"	"3852"	"3840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.8"	""	"38.1"	""	"39.5"	""	"34.2"	""	"45.3"	"36.2"	""	"839"	"20"	"36.000"	"29.000"	"0.420467047373679"	"14"	"0.001422"	"0.01958"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANSPDGK"	"[K].sANSPDGk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"617.34552"	"1233.68376"	"1233.68394"	"-0.14"	"-0.00009"	"10/76"	"10"	"76"	"294512.880737305"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"22.9404"	"3906"	"3906"	"3886"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.8"	""	"43.6"	""	"44.8"	""	"40.6"	""	"40.8"	"42.5"	""	"839"	"19"	"36.000"	"29.000"	"0.537937679424201"	"20"	"0.0006037"	"0.005599"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAALEFLNR"	"[K].aAALEFLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"617.36072"	"1233.71416"	"1233.71529"	"-0.91"	"-0.00056"	"6/66"	"6"	"66"	"4674751.46185303"	"HCD"	"MS2"	"0"	"271.8"	"100.000"	"48.9762"	"14429"	"14429"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"336.1"	""	"455.9"	""	"344.0"	""	"467.6"	"0.9"	"483.9"	"486.2"	""	"703"	"25"	"35.000"	"28.000"	"0.117199384086277"	"22"	"0.0001889"	"0.0004113"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAALEFLNR"	"[K].aAALEFLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"617.36169"	"1233.71611"	"1233.71529"	"0.67"	"0.00041"	"7/66"	"7"	"66"	"5195320.79705811"	"HCD"	"MS2"	"0"	"270.3"	"100.000"	"49.2329"	"14581"	"14581"	"14558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"378.2"	""	"317.2"	""	"329.5"	""	"487.1"	""	"533.6"	"520.0"	""	"702"	"36"	"35.000"	"28.000"	"0.0097792853018905"	"17"	"0.0001889"	"0.0004211"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"617.36255"	"1233.71782"	"1233.72032"	"-2.03"	"-0.00125"	"6/66"	"6"	"66"	"792897.909545898"	"HCD"	"MS2"	"0"	"69.9"	"100.000"	"26.1121"	"5149"	"5149"	"5126"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.9"	""	"100.3"	""	"124.9"	""	"98.5"	""	"118.6"	"107.2"	""	"701"	"27"	"35.000"	"28.000"	"0.0646677904422406"	"28"	"0.0001889"	"0.0008542"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"617.36292"	"1233.71855"	"1233.72032"	"-1.43"	"-0.00088"	"6/66"	"6"	"66"	"845753.893981934"	"HCD"	"MS2"	"25.92433"	"72.9"	"100.000"	"26.1864"	"5216"	"5216"	"5192"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.8"	""	"109.3"	""	"115.2"	""	"110.5"	""	"118.8"	"114.6"	""	"689"	"30"	"35.000"	"28.000"	"0.0354968018492137"	"27"	"0.0001889"	"0.0008892"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"617.36725"	"1233.72722"	"1233.72772"	"-0.40"	"-0.00025"	"9/54"	"9"	"54"	"14047214.6138916"	"HCD"	"MS2"	"20.5481"	"621.7"	"56.225"	"36.3567"	"9325"	"9325"	"9305"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"846.7"	""	"813.6"	""	"878.6"	""	"901.1"	""	"1178.0"	"1285.5"	""	"681"	"26"	"35.000"	"28.000"	"0.0908065375269565"	""	"0.0008125"	"0.007875"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"617.36737"	"1233.72746"	"1233.72772"	"-0.20"	"-0.00013"	"6/54"	"6"	"54"	"13316657.826416"	"HCD"	"MS2"	"27.2808"	"662.2"	"67.034"	"36.2697"	"9246"	"9246"	"9226"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"910.2"	""	"877.0"	""	"933.1"	""	"960.8"	""	"1234.1"	"1366.6"	""	"681"	"25"	"35.000"	"28.000"	"0.111973980313272"	"28"	"0.0007076"	"0.006897"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHYTIGK"	"[R].gHYTIGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"411.91577"	"1233.73276"	"1233.73558"	"-2.28"	"-0.00094"	"5/48"	"5"	"48"	"15551810.2180786"	"HCD"	"MS2"	"41.36946"	"772.6"	"100.000"	"27.4115"	"5710"	"5710"	"5682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"967.5"	""	"901.9"	""	"949.2"	""	"1362.3"	""	"1546.5"	"1614.2"	""	"668"	"26"	"35.000"	"28.000"	"0.0848684883653469"	"23"	"0.0005959"	"0.003661"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHYTIGK"	"[R].gHYTIGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"411.91599"	"1233.73340"	"1233.73558"	"-1.76"	"-0.00073"	"5/48"	"5"	"48"	"15887687.2908936"	"HCD"	"MS2"	"18.26975"	"825.5"	"100.000"	"27.3484"	"5649"	"5649"	"5629"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1022.3"	""	"946.9"	""	"971.1"	""	"1481.1"	""	"1682.2"	"1741.0"	""	"668"	"23"	"35.000"	"28.000"	"0.181445610718473"	"19"	"0.0004166"	"0.002358"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHYTIGK"	"[R].gHYTIGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"617.37079"	"1233.73430"	"1233.73558"	"-1.04"	"-0.00064"	"12/48"	"12"	"48"	"2402973.10913086"	"HCD"	"MS2"	"0"	"205.3"	"100.000"	"27.3621"	"5655"	"5655"	"5629"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.4"	""	"231.4"	""	"232.6"	""	"370.4"	""	"430.5"	"427.1"	""	"628"	"37"	"34.000"	"27.000"	"0.0065755131113718"	"25"	"0.0002277"	"0.001281"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHYTIGK"	"[R].gHYTIGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"617.37091"	"1233.73454"	"1233.73558"	"-0.84"	"-0.00052"	"6/48"	"6"	"48"	"2559666.62762451"	"HCD"	"MS2"	"13.16934"	"221.7"	"100.000"	"27.4369"	"5720"	"5720"	"5698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.2"	""	"265.5"	""	"241.7"	""	"417.1"	""	"449.5"	"459.0"	""	"637"	"33"	"35.000"	"28.000"	"0.0148289170787062"	"22"	"0.0004166"	"0.002219"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"4"	"4"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"617.37518"	"1233.74309"	"1233.74547"	"-1.93"	"-0.00119"	"6/56"	"6"	"56"	"2868852.04644775"	"HCD"	"MS2"	"0"	"275.9"	"100.000"	"37.9881"	"9995"	"9995"	"9969"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.1"	""	"338.0"	""	"382.7"	""	"467.6"	"2.2"	"532.8"	"549.7"	""	"587"	"35"	"34.000"	"27.000"	"0.00992220294264556"	"22"	"0.000494"	"0.002746"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"4"	"4"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"617.37622"	"1233.74516"	"1233.74547"	"-0.25"	"-0.00015"	"6/56"	"6"	"56"	"3760783.67010498"	"HCD"	"MS2"	"0"	"334.9"	"100.000"	"37.8652"	"9901"	"9901"	"9879"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"436.5"	""	"432.2"	""	"434.6"	""	"533.4"	"3.8"	"683.4"	"654.2"	""	"529"	"35"	"34.000"	"27.000"	"0.00867812050284198"	"21"	"0.0003839"	"0.002012"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEFAK"	"[K].lAPEFAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"617.38293"	"1233.75859"	"1233.76073"	"-1.73"	"-0.00107"	"6/48"	"6"	"48"	"66872954.3353271"	"HCD"	"MS2"	"0"	"1941.6"	"41.068"	"41.1463"	"11244"	"11244"	"11221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2435.9"	""	"2413.1"	""	"2588.7"	""	"3527.3"	""	"3506.5"	"3979.2"	""	"467"	"22"	"33.000"	"26.000"	"0.154984006938846"	"22"	"0.002981"	"0.05628"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEFAK"	"[K].lAPEFAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"617.38306"	"1233.75884"	"1233.76073"	"-1.53"	"-0.00095"	"6/48"	"6"	"48"	"80684123.2141113"	"HCD"	"MS2"	"12.70889"	"1625.3"	"29.222"	"41.3274"	"11362"	"11362"	"11341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2087.3"	""	"2007.2"	""	"2198.4"	""	"2929.2"	""	"2857.9"	"3352.3"	""	"467"	"24"	"33.000"	"26.000"	"0.0877580339013517"	"20"	"0.002981"	"0.05601"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDMVGK"	"[K].lLDMVGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"617.38397"	"1233.76067"	"1233.76410"	"-2.78"	"-0.00172"	"5/48"	"5"	"48"	"3980986.86102295"	"HCD"	"MS2"	"0"	"316.8"	"100.000"	"54.1921"	"16584"	"16584"	"16561"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"447.2"	""	"504.8"	""	"483.8"	""	"474.2"	""	"537.5"	"554.5"	""	"457"	"18"	"33.000"	"26.000"	"0.347445110543876"	"22"	"0.0009727"	"0.0105"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEFAK"	"[K].lAPEFAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"617.38452"	"1233.76177"	"1233.76073"	"0.84"	"0.00052"	"6/48"	"6"	"48"	"7088948.11566162"	"HCD"	"MS2"	"15.44363"	"561.1"	"100.000"	"41.6138"	"11479"	"11479"	"11461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"839.8"	""	"814.9"	""	"786.2"	""	"877.6"	""	"955.2"	"1043.2"	""	"443"	"16"	"33.000"	"26.000"	"0.564122900947587"	"23"	"0.00103"	"0.01229"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDMVGK"	"[K].lLDMVGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"617.38483"	"1233.76238"	"1233.76410"	"-1.40"	"-0.00086"	"12/48"	"12"	"48"	"2588668.35638428"	"HCD"	"MS2"	"0"	"209.5"	"100.000"	"53.7937"	"16370"	"16370"	"16356"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"307.5"	""	"330.4"	""	"324.4"	""	"308.2"	"0.2"	"357.4"	"353.9"	""	"439"	"25"	"33.000"	"26.000"	"0.0766362992475496"	"24"	"0.0004166"	"0.002322"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDMVGK"	"[K].lLDMVGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"617.38483"	"1233.76238"	"1233.76410"	"-1.40"	"-0.00086"	"6/48"	"6"	"48"	"2212343.79333496"	"HCD"	"MS2"	"0"	"191.6"	"100.000"	"53.8921"	"16464"	"16464"	"16446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"311.3"	""	"309.5"	""	"297.8"	""	"245.8"	""	"336.5"	"312.8"	""	"439"	"35"	"33.000"	"26.000"	"0.00736944063263284"	"26"	"0.0003146"	"0.001468"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEFAK"	"[K].lAPEFAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"617.38525"	"1233.76323"	"1233.76073"	"2.03"	"0.00125"	"6/48"	"6"	"48"	"6632291.9954834"	"HCD"	"MS2"	"4.708874"	"559.0"	"100.000"	"41.4647"	"11374"	"11374"	"11355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"788.3"	""	"782.7"	""	"770.0"	""	"899.9"	""	"1004.4"	"1057.4"	""	"436"	"10"	"33.000"	"26.000"	"2.29327688493462"	"21"	"0.001846"	"0.02554"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLIEFLLR"	"[R].tLIEFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"617.39148"	"1233.77568"	"1233.77683"	"-0.93"	"-0.00057"	"11/62"	"11"	"62"	"2102352.49395752"	"HCD"	"MS2"	"19.13739"	"98.7"	"100.000"	"80.0341"	"27110"	"27110"	"27087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.2"	""	"133.4"	""	"147.2"	""	"162.2"	"0.7"	"151.0"	"226.6"	""	"355"	"41"	"32.000"	"25.000"	"0.0015530962010287"	""	"0.0001889"	"0.000561"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLIEFLLR"	"[R].tLIEFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"617.39154"	"1233.77580"	"1233.77683"	"-0.83"	"-0.00051"	"6/62"	"6"	"62"	"988648.997009277"	"HCD"	"MS2"	"16.99581"	"53.4"	"100.000"	"80.3412"	"27235"	"27235"	"27215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.7"	""	"69.5"	""	"69.8"	""	"79.6"	""	"85.8"	"143.0"	""	"355"	"40"	"32.000"	"25.000"	"0.00177091761328503"	"23"	"0.0001889"	"0.0004226"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLIEFLLR"	"[R].tLIEFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"617.39215"	"1233.77703"	"1233.77683"	"0.16"	"0.00010"	"6/62"	"6"	"62"	"2484576.98797607"	"HCD"	"MS2"	"15.9885"	"119.6"	"100.000"	"80.0740"	"27075"	"27075"	"27057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.4"	""	"159.9"	""	"174.5"	""	"194.2"	""	"197.2"	"258.7"	""	"320"	"40"	"32.000"	"25.000"	"0.00162599790859311"	""	"0.0001889"	"0.0007772"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSQLLER"	"[R].fLSQLLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"617.87054"	"1234.73381"	"1234.73569"	"-1.52"	"-0.00094"	"6/72"	"6"	"72"	"2610452.01965332"	"HCD"	"MS2"	"13.30322"	"142.6"	"100.000"	"62.6330"	"20028"	"20028"	"20003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.5"	""	"197.5"	""	"210.5"	""	"232.8"	"0.1"	"256.4"	"274.7"	""	"586"	"27"	"34.000"	"27.000"	"0.0566066716885959"	""	"0.0001889"	"0.0007227"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNTFLER"	"[R].lLNTFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"617.87067"	"1234.73406"	"1234.73569"	"-1.32"	"-0.00082"	"6/72"	"6"	"72"	"1442162.08380127"	"HCD"	"MS2"	"11.41646"	"93.4"	"100.000"	"58.5368"	"18307"	"18307"	"18281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.8"	""	"110.1"	""	"129.8"	""	"164.8"	""	"177.4"	"186.2"	""	"580"	"24"	"34.000"	"27.000"	"0.115451079460514"	"20"	"0.0001889"	"0.0004241"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSQLLER"	"[R].fLSQLLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"617.87097"	"1234.73467"	"1234.73569"	"-0.83"	"-0.00051"	"6/72"	"6"	"72"	"2571547.35321045"	"HCD"	"MS2"	"5.499946"	"133.7"	"100.000"	"62.5399"	"19937"	"19937"	"19913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.1"	""	"171.3"	""	"189.0"	""	"235.8"	"0.6"	"243.2"	"262.0"	""	"598"	"30"	"34.000"	"27.000"	"0.0335483517836287"	""	"0.0001889"	"0.0007916"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNTFLER"	"[R].lLNTFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"617.87115"	"1234.73503"	"1234.73569"	"-0.53"	"-0.00033"	"6/72"	"6"	"72"	"3107480.01947021"	"HCD"	"MS2"	"0"	"147.4"	"100.000"	"58.6071"	"18390"	"18390"	"18373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"185.3"	""	"189.4"	""	"205.8"	""	"264.3"	"4.1"	"279.5"	"268.8"	""	"602"	"32"	"34.000"	"27.000"	"0.0183048635384894"	"18"	"0.0001889"	"0.0005303"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNTFLER"	"[R].lLNTFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"617.87122"	"1234.73516"	"1234.73569"	"-0.43"	"-0.00027"	"11/72"	"11"	"72"	"8967243.48162842"	"HCD"	"MS2"	"12.04397"	"399.8"	"100.000"	"58.1534"	"18150"	"18150"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"478.1"	""	"491.8"	""	"563.0"	""	"717.2"	""	"780.8"	"764.7"	""	"602"	"36"	"34.000"	"27.000"	"0.00702370876746581"	"20"	"0.0001889"	"0.0009766"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNTFLER"	"[R].lLNTFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"617.87134"	"1234.73540"	"1234.73569"	"-0.23"	"-0.00014"	"11/72"	"11"	"72"	"8343522.33520508"	"HCD"	"MS2"	"9.088168"	"380.4"	"100.000"	"58.3155"	"18270"	"18270"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"450.0"	"3.3"	"476.9"	""	"499.5"	""	"730.2"	""	"714.6"	"735.5"	""	"573"	"40"	"34.000"	"27.000"	"0.00274868280929315"	"22"	"0.0001889"	"0.0009047"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVLITGLR"	"[R].fSVLITGLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"617.89008"	"1234.77287"	"1234.77207"	"0.65"	"0.00040"	"7/72"	"7"	"72"	"3759317.83782959"	"HCD"	"MS2"	"5.360588"	"182.0"	"100.000"	"64.1885"	"20663"	"20663"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.6"	""	"238.0"	""	"228.1"	""	"317.0"	"0.9"	"352.5"	"411.4"	""	"279"	"48"	"31.000"	"24.000"	"0.00024354219033241"	"15"	"0.0001889"	"0.0005311"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVLITGLR"	"[R].fSVLITGLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"617.89050"	"1234.77373"	"1234.77207"	"1.34"	"0.00083"	"7/72"	"7"	"72"	"3220566.33874512"	"HCD"	"MS2"	"23.30831"	"166.6"	"100.000"	"64.1160"	"20581"	"20581"	"20553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.9"	""	"205.7"	""	"211.2"	""	"288.7"	"5.5"	"321.8"	"351.7"	""	"279"	"42"	"31.000"	"24.000"	"0.000890377563235814"	"21"	"0.0001889"	"0.0004897"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTSIALK"	"[K].sGTSIALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"617.89172"	"1234.77617"	"1234.77711"	"-0.76"	"-0.00047"	"6/62"	"6"	"62"	"2248087.03131104"	"HCD"	"MS2"	"22.59382"	"187.4"	"100.000"	"34.4739"	"8510"	"8510"	"8483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.5"	""	"259.4"	""	"249.2"	""	"311.1"	"1.8"	"309.9"	"339.4"	""	"261"	"34"	"31.000"	"24.000"	"0.00524337008157867"	""	"0.0001889"	"0.000499"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTSIALK"	"[K].sGTSIALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.4242"	"0.0000"	"1"	"1"	"1"	"617.89185"	"1234.77641"	"1234.77711"	"-0.56"	"-0.00035"	"7/62"	"7"	"62"	"2554246.56213379"	"HCD"	"MS2"	"0"	"203.6"	"100.000"	"34.5080"	"8567"	"8567"	"8538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"324.7"	""	"271.4"	""	"284.0"	""	"346.6"	"1.2"	"345.0"	"353.1"	""	"261"	"33"	"31.000"	"24.000"	"0.00672373381179192"	""	"0.0001889"	"0.0009187"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGFVVLK"	"[K].nGFVVLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"617.89880"	"1234.79033"	"1234.79236"	"-1.65"	"-0.00102"	"10/62"	"10"	"62"	"8636863.56292725"	"HCD"	"MS2"	"0"	"680.3"	"100.000"	"43.6993"	"12325"	"12325"	"12302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"989.8"	""	"950.8"	""	"983.4"	""	"1182.7"	"0.8"	"1085.3"	"1244.1"	""	"185"	"27"	"29.000"	"22.000"	"0.0168710352464566"	""	"0.001217"	"0.01659"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGFVVLK"	"[K].nGFVVLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"617.89880"	"1234.79033"	"1234.79236"	"-1.65"	"-0.00102"	"10/62"	"10"	"62"	"8711127.73431396"	"HCD"	"MS2"	"0"	"671.5"	"100.000"	"43.4629"	"12180"	"12180"	"12159"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"969.3"	""	"918.3"	""	"975.1"	""	"1174.7"	""	"1055.4"	"1267.3"	""	"185"	"27"	"29.000"	"22.000"	"0.0169099269993204"	""	"0.0007076"	"0.006996"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFVLNK"	"[K].gVFVLNk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"617.89886"	"1234.79045"	"1234.79236"	"-1.55"	"-0.00096"	"6/52"	"6"	"52"	"16406451.8183594"	"HCD"	"MS2"	"9.696589"	"650.9"	"52.131"	"45.8930"	"13217"	"13217"	"13203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1125.0"	""	"1013.7"	""	"764.9"	""	"1097.9"	""	"1018.3"	"1137.0"	""	"185"	"35"	"29.000"	"22.000"	"0.00261301397679703"	"19"	"0.00103"	"0.01161"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFVLNK"	"[K].gVFVLNk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"617.89905"	"1234.79082"	"1234.79236"	"-1.25"	"-0.00077"	"6/52"	"6"	"52"	"18908988.4675293"	"HCD"	"MS2"	"2.673295"	"381.8"	"25.602"	"45.6448"	"13065"	"13065"	"13047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"648.7"	""	"587.2"	""	"420.5"	""	"660.4"	"0.8"	"638.0"	"656.5"	""	"185"	"34"	"29.000"	"22.000"	"0.00374232699820134"	"18"	"0.001217"	"0.01843"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFVLNK"	"[K].gVFVLNk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"617.89911"	"1234.79094"	"1234.79236"	"-1.15"	"-0.00071"	"6/52"	"6"	"52"	"19629319.1291504"	"HCD"	"MS2"	"4.549485"	"1507.0"	"100.000"	"45.5977"	"13099"	"13099"	"13083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2904.9"	""	"2423.4"	""	"1638.3"	""	"2728.4"	"1.0"	"2180.3"	"2353.5"	""	"185"	"32"	"29.000"	"22.000"	"0.00547194511612313"	"18"	"0.00103"	"0.0118"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFVLNK"	"[K].gVFVLNk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"617.89941"	"1234.79155"	"1234.79236"	"-0.66"	"-0.00041"	"6/52"	"6"	"52"	"18860851.7880249"	"HCD"	"MS2"	"23.71519"	"1413.5"	"100.000"	"45.3539"	"12951"	"12951"	"12928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2734.4"	""	"2282.8"	""	"1563.7"	""	"2558.5"	"7.3"	"2039.7"	"2158.7"	""	"185"	"34"	"29.000"	"22.000"	"0.0038560417971006"	"19"	"0.0009404"	"0.009934"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAGFK"	"[K].iLQAGFk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"617.90009"	"1234.79289"	"1234.79236"	"0.43"	"0.00026"	"12/58"	"12"	"58"	"8396958.23999023"	"HCD"	"MS2"	"15.97832"	"624.6"	"100.000"	"44.3601"	"12595"	"12595"	"12572"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"832.6"	""	"822.3"	""	"858.4"	""	"1136.5"	"3.0"	"1158.3"	"1107.0"	""	"176"	"27"	"29.000"	"22.000"	"0.0175987844527682"	"18"	"0.00109"	"0.01473"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAGFK"	"[K].iLQAGFk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"617.90045"	"1234.79363"	"1234.79236"	"1.02"	"0.00063"	"12/58"	"12"	"58"	"8597430.05255127"	"HCD"	"MS2"	"9.449288"	"651.4"	"100.000"	"44.1145"	"12445"	"12445"	"12422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"898.4"	""	"841.7"	""	"882.4"	""	"1167.5"	"5.1"	"1217.8"	"1159.1"	""	"176"	"25"	"29.000"	"22.000"	"0.0274462283400267"	"18"	"0.001058"	"0.01333"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNQAPGK"	"[K].yNQAPGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"618.36090"	"1235.71453"	"1235.71484"	"-0.26"	"-0.00016"	"9/60"	"9"	"60"	"232899.391967773"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"26.9687"	"5535"	"5535"	"5510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.4"	""	"21.9"	""	"26.4"	""	"31.9"	""	"44.9"	"34.4"	""	"680"	"23"	"35.000"	"28.000"	"0.164239992693523"	"18"	"0.0003839"	"0.001626"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLEEFIR"	"[K].lSLEEFIR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P84076"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2"	"Q5PQN0; P84076"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"618.36285"	"1235.71843"	"1235.71970"	"-1.03"	"-0.00064"	"6/62"	"6"	"62"	"3811407.08581543"	"HCD"	"MS2"	"37.83218"	"196.1"	"100.000"	"64.1628"	"20653"	"20653"	"20627"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"210.1"	""	"247.8"	""	"248.7"	""	"351.5"	""	"371.0"	"436.0"	""	"673"	"18"	"35.000"	"28.000"	"0.53701333304516"	"15"	"0.000523"	"0.002936"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HWQIPLGR"	"[R].hWQIPLGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"412.57788"	"1235.71909"	"1235.72104"	"-1.58"	"-0.00065"	"6/68"	"6"	"68"	"3785732.72381592"	"HCD"	"MS2"	"24.83116"	"162.5"	"100.000"	"37.9937"	"9954"	"9954"	"9927"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.9"	"2.4"	"237.4"	""	"256.4"	""	"250.7"	""	"253.2"	"305.8"	""	"692"	"10"	"35.000"	"28.000"	"3.13383479910778"	"16"	"0.000523"	"0.002997"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLEEFIR"	"[K].lSLEEFIR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P84076"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2"	"Q5PQN0; P84076"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"618.36371"	"1235.72014"	"1235.71970"	"0.35"	"0.00022"	"6/62"	"6"	"62"	"2900731.57458496"	"HCD"	"MS2"	"41.46297"	"163.8"	"100.000"	"64.0537"	"20555"	"20555"	"20537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.1"	""	"200.0"	""	"217.1"	""	"281.9"	""	"306.9"	"356.2"	""	"640"	"27"	"35.000"	"28.000"	"0.0622515226119252"	"20"	"0.0002277"	"0.001208"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADAMK"	"[K].lLADAmk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"618.37439"	"1235.74150"	"1235.74337"	"-1.51"	"-0.00093"	"5/48"	"5"	"48"	"7088554.53723145"	"HCD"	"MS2"	"25.95163"	"479.3"	"100.000"	"37.4501"	"9731"	"9731"	"9704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"521.4"	""	"569.4"	""	"544.3"	""	"996.7"	"2.2"	"944.4"	"972.4"	""	"467"	"22"	"33.000"	"26.000"	"0.134056193925411"	"14"	"0.00109"	"0.01491"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MITIDGK"	"[R].mITIDGk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"618.37457"	"1235.74187"	"1235.74337"	"-1.21"	"-0.00075"	"6/52"	"6"	"52"	"12783989.8157349"	"HCD"	"MS2"	"24.10573"	"659.8"	"72.651"	"42.2396"	"11733"	"11733"	"11721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"899.0"	""	"954.9"	""	"906.6"	""	"860.7"	"2.7"	"1303.5"	"1331.3"	""	"459"	"24"	"33.000"	"26.000"	"0.0825624724182429"	"21"	"0.001686"	"0.02328"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MITIDGK"	"[R].mITIDGk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"618.37518"	"1235.74309"	"1235.74337"	"-0.22"	"-0.00014"	"6/52"	"6"	"52"	"10595010.4329224"	"HCD"	"MS2"	"46.86411"	"735.2"	"100.000"	"41.9967"	"11590"	"11590"	"11578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1009.0"	""	"1026.3"	""	"1050.7"	""	"1014.8"	""	"1429.6"	"1445.8"	""	"501"	"24"	"33.000"	"26.000"	"0.10612256299541"	"20"	"0.001058"	"0.01316"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAANINK"	"[K].fAANINk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"618.37872"	"1235.75017"	"1235.75123"	"-0.86"	"-0.00053"	"6/56"	"6"	"56"	"7931742.43255615"	"HCD"	"MS2"	"0"	"640.4"	"100.000"	"36.8329"	"9521"	"9521"	"9494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"911.3"	""	"855.2"	""	"887.0"	""	"1025.5"	""	"1168.6"	"1225.2"	""	"391"	"36"	"32.000"	"25.000"	"0.00466817105809526"	"25"	"0.0006037"	"0.004622"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAANINK"	"[K].fAANINk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"618.37952"	"1235.75176"	"1235.75123"	"0.43"	"0.00026"	"6/56"	"6"	"56"	"7653116.34075928"	"HCD"	"MS2"	"4.975693"	"628.1"	"100.000"	"36.7186"	"9431"	"9431"	"9402"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"880.5"	""	"808.9"	""	"856.0"	""	"1025.6"	"0.3"	"1181.1"	"1201.2"	""	"403"	"31"	"33.000"	"26.000"	"0.0150409424819628"	"25"	"0.0008453"	"0.008013"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSELSIK"	"[R].tSELSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"618.38440"	"1235.76152"	"1235.76112"	"0.32"	"0.00020"	"10/56"	"10"	"56"	"8553850.93591309"	"HCD"	"MS2"	"0"	"605.4"	"100.000"	"35.7011"	"9013"	"9013"	"8987"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"857.9"	""	"778.8"	""	"812.8"	""	"1280.1"	"0.8"	"973.6"	"1023.4"	""	"322"	"17"	"32.000"	"25.000"	"0.34900036087597"	"23"	"0.001783"	"0.02481"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSELSIK"	"[R].tSELSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"618.38470"	"1235.76213"	"1235.76112"	"0.82"	"0.00050"	"6/56"	"6"	"56"	"7460550.29840088"	"HCD"	"MS2"	"0"	"505.8"	"100.000"	"35.7812"	"9089"	"9089"	"9065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"706.0"	""	"632.5"	""	"666.6"	""	"1084.2"	"1.2"	"831.7"	"864.7"	""	"321"	"11"	"32.000"	"25.000"	"1.35667254648227"	"20"	"0.002456"	"0.03647"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFILK"	"[R].gEAFILk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"618.38983"	"1235.77239"	"1235.77638"	"-3.23"	"-0.00200"	"6/48"	"6"	"48"	"12133668.8693848"	"HCD"	"MS2"	"15.23398"	"905.3"	"100.000"	"44.3598"	"12545"	"12545"	"12533"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1629.3"	""	"1837.2"	""	"1112.3"	""	"1463.6"	""	"1294.0"	"1205.8"	""	"261"	"33"	"31.000"	"24.000"	"0.00603407232926035"	""	"0.001217"	"0.01734"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFILK"	"[R].gEAFILk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"618.39056"	"1235.77385"	"1235.77638"	"-2.05"	"-0.00126"	"6/48"	"6"	"48"	"15357707.7390137"	"HCD"	"MS2"	"5.817083"	"699.1"	"57.111"	"44.6053"	"12694"	"12694"	"12685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1231.9"	""	"1411.5"	""	"848.2"	""	"1153.1"	""	"1002.0"	"951.4"	""	"260"	"33"	"31.000"	"24.000"	"0.00594214646499338"	""	"0.001587"	"0.02154"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDFVVK"	"[R].iGDFVVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"618.39099"	"1235.77471"	"1235.77638"	"-1.36"	"-0.00084"	"7/48"	"7"	"48"	"6012707.97705078"	"HCD"	"MS2"	"20.29006"	"293.1"	"61.140"	"49.6801"	"14713"	"14713"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"472.6"	""	"426.1"	""	"447.2"	""	"429.4"	""	"484.0"	"515.5"	""	"262"	"10"	"31.000"	"24.000"	"1.38443093706989"	"16"	"0.001718"	"0.02347"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFILK"	"[R].gEAFILk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"412.59644"	"1235.77475"	"1235.77638"	"-1.32"	"-0.00054"	"5/48"	"5"	"48"	"1943656.36468506"	"HCD"	"MS2"	"47.92442"	"111.6"	"100.000"	"44.4652"	"12588"	"12588"	"12562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.4"	""	"230.4"	""	"149.2"	""	"171.0"	"0.6"	"148.0"	"168.3"	""	"262"	"23"	"31.000"	"24.000"	"0.0736667135999358"	""	"0.003539"	"0.08208"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFILK"	"[R].gEAFILk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"3"	"618.39105"	"1235.77483"	"1235.77638"	"-1.26"	"-0.00078"	"6/48"	"6"	"48"	"2782610.97070313"	"HCD"	"MS2"	"19.41349"	"201.6"	"100.000"	"45.2368"	"12952"	"12952"	"12923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"309.9"	""	"339.5"	""	"298.2"	""	"316.6"	"0.1"	"328.4"	"313.1"	""	"262"	"8"	"31.000"	"24.000"	"2.04772341185965"	"18"	"0.0008731"	"0.009018"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFILK"	"[R].gEAFILk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"412.59656"	"1235.77512"	"1235.77638"	"-1.02"	"-0.00042"	"5/48"	"5"	"48"	"1846221.31817627"	"HCD"	"MS2"	"56.59638"	"106.5"	"100.000"	"44.8505"	"12794"	"12794"	"12771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.1"	""	"226.2"	""	"142.8"	""	"167.7"	""	"155.3"	"142.4"	""	"262"	"24"	"31.000"	"24.000"	"0.0527559314966352"	""	"0.001422"	"0.01955"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDFVVK"	"[R].iGDFVVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"618.39142"	"1235.77556"	"1235.77638"	"-0.66"	"-0.00041"	"5/48"	"5"	"48"	"6725051.11810303"	"HCD"	"MS2"	"15.27349"	"489.1"	"97.820"	"49.9186"	"14857"	"14857"	"14830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"777.9"	""	"689.4"	""	"731.0"	""	"748.2"	""	"831.0"	"852.0"	""	"262"	"19"	"31.000"	"24.000"	"0.156773009601249"	"20"	"0.0007076"	"0.007009"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGFVVLK"	"[K].nGFVVLk.[G]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"618.39148"	"1235.77568"	"1235.77638"	"-0.57"	"-0.00035"	"5/62"	"5"	"62"	"7909535.85949707"	"HCD"	"MS2"	"38.77225"	"585.2"	"100.000"	"49.5136"	"14692"	"14692"	"14670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"742.5"	""	"1055.9"	""	"714.7"	""	"1003.3"	""	"984.0"	"1045.8"	""	"262"	"22"	"31.000"	"24.000"	"0.0743483433085197"	"18"	"0.0008731"	"0.008781"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFILK"	"[R].gEAFILk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"618.39154"	"1235.77580"	"1235.77638"	"-0.47"	"-0.00029"	"6/48"	"6"	"48"	"27395338.1672363"	"HCD"	"MS2"	"0.4317546"	"1047.0"	"52.911"	"44.8942"	"12812"	"12812"	"12799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1825.6"	""	"2204.3"	""	"1280.2"	""	"1657.3"	"3.9"	"1473.6"	"1434.2"	""	"261"	"34"	"31.000"	"24.000"	"0.00515953439188907"	""	"0.001846"	"0.02656"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFILK"	"[R].gEAFILk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"618.39166"	"1235.77605"	"1235.77638"	"-0.27"	"-0.00017"	"6/48"	"6"	"48"	"3066480.4621582"	"HCD"	"MS2"	"21.9548"	"218.1"	"100.000"	"44.9658"	"12792"	"12792"	"12768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"336.9"	""	"417.6"	""	"275.2"	""	"359.6"	"0.4"	"353.6"	"318.5"	""	"256"	"14"	"31.000"	"24.000"	"0.563910225288388"	"20"	"0.0008453"	"0.008243"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFILK"	"[R].gEAFILk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"618.39166"	"1235.77605"	"1235.77638"	"-0.27"	"-0.00017"	"6/48"	"6"	"48"	"31793258.1784668"	"HCD"	"MS2"	"0"	"779.3"	"32.965"	"44.6418"	"12659"	"12659"	"12646"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1421.3"	""	"1594.6"	""	"953.7"	""	"1236.2"	""	"1091.3"	"1057.5"	""	"256"	"36"	"31.000"	"24.000"	"0.00359923306291065"	""	"0.002033"	"0.03158"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVVLFK"	"[K].dGVVLFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"618.39209"	"1235.77690"	"1235.77638"	"0.42"	"0.00026"	"6/48"	"6"	"48"	"6864002.46356201"	"HCD"	"MS2"	"9.01903"	"549.9"	"100.000"	"47.7884"	"13990"	"13990"	"13970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"629.4"	""	"630.0"	""	"643.0"	""	"962.7"	""	"1191.4"	"1175.2"	""	"256"	"24"	"31.000"	"24.000"	"0.0546021784066039"	""	"0.0006037"	"0.00569"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGFVVLK"	"[K].nGFVVLk.[G]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"618.39221"	"1235.77715"	"1235.77638"	"0.62"	"0.00038"	"5/62"	"5"	"62"	"6944634.16235352"	"HCD"	"MS2"	"49.49688"	"541.2"	"100.000"	"49.2273"	"14531"	"14531"	"14511"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"644.6"	""	"1062.3"	""	"618.2"	""	"940.4"	""	"938.0"	"927.2"	""	"256"	"22"	"31.000"	"24.000"	"0.074337845442728"	"19"	"0.00103"	"0.01306"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLMSLK"	"[R].sVLMSLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"618.39246"	"1235.77764"	"1235.77975"	"-1.71"	"-0.00106"	"6/56"	"6"	"56"	"6606987.50891113"	"HCD"	"MS2"	"20.79647"	"486.8"	"100.000"	"47.4097"	"13787"	"13787"	"13768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"630.7"	""	"582.1"	""	"578.9"	""	"696.9"	""	"1025.8"	"1114.9"	""	"254"	"32"	"31.000"	"24.000"	"0.00810594627461997"	"19"	"0.0008731"	"0.009262"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYGAIK"	"[R].lLYGAIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"618.40973"	"1235.81218"	"1235.81277"	"-0.47"	"-0.00029"	"6/50"	"6"	"50"	"7433291.4677124"	"HCD"	"MS2"	"34.31089"	"544.3"	"100.000"	"49.1512"	"14500"	"14500"	"14479"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"567.8"	""	"1684.9"	""	"543.6"	""	"787.7"	""	"772.2"	"795.6"	""	"54"	"26"	"24.000"	"17.000"	"0.00730068758309388"	"14"	"0.003107"	"0.06067"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYGAIK"	"[R].lLYGAIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"618.40979"	"1235.81230"	"1235.81277"	"-0.37"	"-0.00023"	"6/50"	"6"	"50"	"8371931.637146"	"HCD"	"MS2"	"34.09192"	"636.0"	"100.000"	"49.4308"	"14658"	"14658"	"14638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"671.7"	""	"1870.3"	""	"674.8"	""	"947.0"	""	"930.9"	"918.3"	""	"54"	"25"	"24.000"	"17.000"	"0.00921220861379207"	"14"	"0.002981"	"0.05448"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLALCGGED"	"[K].aLLALcGGED.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"618.81158"	"1236.61589"	"1236.61656"	"-0.54"	"-0.00033"	"7/76"	"7"	"76"	"163113.148254395"	"HCD"	"MS2"	"31.79432"	"8.0"	"100.000"	"87.6955"	"30163"	"30163"	"30150"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.2"	""	"8.5"	""	"9.9"	""	"15.1"	""	"14.5"	"16.4"	""	"561"	"37"	"34.000"	"27.000"	"0.00511602744500659"	"17"	"0.0001889"	"0.0005585"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLALCGGED"	"[K].aLLALcGGED.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"618.81158"	"1236.61589"	"1236.61656"	"-0.54"	"-0.00033"	"5/76"	"5"	"76"	"214148.42175293"	"HCD"	"MS2"	"21.62226"	"6.6"	"100.000"	"87.7209"	"30224"	"30224"	"30217"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.2"	""	"10.2"	""	"6.7"	""	"10.9"	""	"12.8"	"12.3"	""	"561"	"27"	"34.000"	"27.000"	"0.0504583291693625"	"17"	"0.0004557"	"0.002538"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLALCGGED"	"[K].aLLALcGGED.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"618.81158"	"1236.61589"	"1236.61656"	"-0.54"	"-0.00033"	"8/76"	"8"	"76"	"719045.286987305"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"87.1090"	"29934"	"29934"	"29916"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"12.0"	""	"16.1"	""	"15.2"	""	"18.7"	"22.8"	""	"561"	"51"	"34.000"	"27.000"	"0.000205084512917099"	"21"	"0.0001889"	"0.0006635"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLALCGGED"	"[K].aLLALcGGED.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"618.81177"	"1236.61626"	"1236.61656"	"-0.24"	"-0.00015"	"8/76"	"8"	"76"	"1738711.08990479"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"87.4604"	"30127"	"30127"	"30116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.4"	""	"19.5"	""	"27.5"	""	"25.4"	""	"28.1"	"33.9"	""	"559"	"51"	"34.000"	"27.000"	"0.00020154954043162"	"21"	"0.0001308"	"0.0002613"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLALCGGED"	"[K].aLLALcGGED.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"618.81183"	"1236.61638"	"1236.61656"	"-0.15"	"-0.00009"	"8/76"	"8"	"76"	"707609.219604492"	"HCD"	"MS2"	"6.695281"	"9.8"	"100.000"	"87.1677"	"30009"	"30009"	"29991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.9"	""	"10.2"	""	"16.9"	""	"15.2"	""	"18.5"	"18.9"	""	"559"	"48"	"34.000"	"27.000"	"0.000477949280567736"	"20"	"0.0001889"	"0.0004146"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLALCGGED"	"[K].aLLALcGGED.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"618.81219"	"1236.61711"	"1236.61656"	"0.45"	"0.00028"	"8/76"	"8"	"76"	"1610686.00036621"	"HCD"	"MS2"	"0.4010228"	"16.2"	"100.000"	"87.4133"	"30057"	"30057"	"30041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.6"	""	"17.8"	""	"28.4"	""	"26.4"	""	"28.3"	"32.7"	""	"558"	"48"	"34.000"	"27.000"	"0.000450406037354589"	"20"	"0.0001889"	"0.0004454"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQQNTFTR"	"[K].iQQNTFTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"618.84790"	"1236.68852"	"1236.68980"	"-1.03"	"-0.00064"	"6/72"	"6"	"72"	"1038185.41467285"	"HCD"	"MS2"	"0"	"81.2"	"100.000"	"30.4036"	"6857"	"6857"	"6826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.2"	""	"110.4"	""	"122.1"	""	"131.4"	""	"137.4"	"143.8"	""	"829"	"33"	"36.000"	"29.000"	"0.0207742108338504"	"24"	"0.0001889"	"0.0005876"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQQNTFTR"	"[K].iQQNTFTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"618.84827"	"1236.68926"	"1236.68980"	"-0.44"	"-0.00027"	"6/72"	"6"	"72"	"1113990.14654541"	"HCD"	"MS2"	"0"	"82.0"	"100.000"	"30.4772"	"6928"	"6928"	"6901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.5"	""	"111.6"	""	"124.1"	""	"124.0"	""	"136.0"	"159.1"	""	"811"	"37"	"36.000"	"29.000"	"0.00827924736563495"	"25"	"0.0001859"	"0.0003364"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMADNSK"	"[R].iMADNSk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"618.85352"	"1236.69975"	"1236.70223"	"-2.00"	"-0.00124"	"6/56"	"6"	"56"	"1093134.92913818"	"HCD"	"MS2"	"15.6916"	"112.6"	"100.000"	"31.0549"	"7121"	"7121"	"7094"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.2"	""	"116.9"	""	"151.8"	""	"175.8"	""	"197.5"	"243.1"	""	"779"	"23"	"35.000"	"28.000"	"0.195212427497822"	"28"	"0.0001889"	"0.0009372"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMADNSK"	"[R].iMADNSk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"618.85480"	"1236.70232"	"1236.70223"	"0.07"	"0.00004"	"6/56"	"6"	"56"	"1341548.62731934"	"HCD"	"MS2"	"20.63876"	"128.7"	"100.000"	"31.1352"	"7196"	"7196"	"7168"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.4"	""	"132.9"	""	"184.5"	""	"199.9"	"2.1"	"229.3"	"259.3"	""	"814"	"23"	"36.000"	"29.000"	"0.19036820250389"	"26"	"0.0002277"	"0.001287"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEFLSLR"	"[R].iMEFLSLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"619.36163"	"1237.71599"	"1237.71760"	"-1.30"	"-0.00080"	"5/62"	"5"	"62"	"5249955.16748047"	"HCD"	"MS2"	"7.826408"	"262.0"	"100.000"	"72.3502"	"23986"	"23986"	"23967"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.8"	""	"409.8"	""	"436.9"	""	"300.6"	""	"486.1"	"522.3"	""	"530"	"30"	"34.000"	"27.000"	"0.0274945030191773"	"20"	"0.0002277"	"0.001232"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEFLSLR"	"[R].iMEFLSLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"619.36273"	"1237.71819"	"1237.71760"	"0.48"	"0.00030"	"5/62"	"5"	"62"	"4743640.93914795"	"HCD"	"MS2"	"7.645273"	"236.8"	"100.000"	"72.4350"	"23970"	"23970"	"23953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.7"	""	"385.5"	""	"390.6"	""	"263.5"	""	"442.9"	"451.7"	""	"533"	"30"	"34.000"	"27.000"	"0.0277138724193444"	"20"	"0.0003839"	"0.001777"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPMSAK"	"[K].fVPMSAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"619.37085"	"1237.73442"	"1237.73789"	"-2.80"	"-0.00173"	"6/48"	"6"	"48"	"11612083.6112061"	"HCD"	"MS2"	"24.34787"	"831.9"	"100.000"	"40.4123"	"10943"	"10943"	"10917"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1638.6"	""	"2260.5"	""	"1043.0"	""	"861.6"	"3.3"	"1070.1"	"957.2"	""	"466"	"24"	"33.000"	"26.000"	"0.0991644302601621"	"26"	"0.001007"	"0.01094"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPMSAK"	"[K].fVPMSAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"619.37219"	"1237.73711"	"1237.73789"	"-0.63"	"-0.00039"	"6/48"	"6"	"48"	"13379752.0708618"	"HCD"	"MS2"	"11.80924"	"941.5"	"100.000"	"40.5933"	"11061"	"11061"	"11037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1840.1"	""	"2710.7"	""	"1197.3"	""	"974.7"	"7.9"	"1135.7"	"994.3"	""	"393"	"25"	"32.000"	"25.000"	"0.0586627684617379"	"24"	"0.001058"	"0.01411"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPFSSIK"	"[K].tPFSSIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"619.38123"	"1237.75517"	"1237.75564"	"-0.38"	"-0.00024"	"6/56"	"6"	"56"	"8444373.15234375"	"HCD"	"MS2"	"0"	"632.0"	"100.000"	"39.4625"	"10557"	"10557"	"10534"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"898.2"	""	"1046.0"	""	"670.4"	""	"1146.0"	""	"1127.8"	"1100.8"	""	"301"	"29"	"31.000"	"24.000"	"0.0209670098843268"	"19"	"0.004167"	"0.1068"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPFSSIK"	"[K].tPFSSIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"619.38245"	"1237.75762"	"1237.75564"	"1.59"	"0.00099"	"6/56"	"6"	"56"	"5756641.44226074"	"HCD"	"MS2"	"2.976402"	"474.1"	"100.000"	"39.6497"	"10677"	"10677"	"10654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"619.4"	""	"664.9"	""	"488.0"	""	"860.2"	""	"960.6"	"910.0"	""	"282"	"17"	"31.000"	"24.000"	"0.299377469142031"	"23"	"0.006092"	"0.2178"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIFAGIK"	"[K].mIFAGIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"P10715; P62898"	"Cytochrome c, testis-specific OS=Rattus norvegicus OX=10116 GN=Cyct PE=2 SV=2; Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"619.38855"	"1237.76982"	"1237.77427"	"-3.59"	"-0.00222"	"6/50"	"6"	"50"	"5966220.97924805"	"HCD"	"MS2"	"0"	"496.0"	"100.000"	"53.2671"	"16223"	"16223"	"16210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"746.9"	""	"677.1"	""	"654.7"	""	"783.7"	""	"871.1"	"969.0"	""	"243"	"12"	"30.000"	"23.000"	"0.722064972717921"	"20"	"0.001912"	"0.02704"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIFAGIK"	"[K].mIFAGIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"P10715; P62898"	"Cytochrome c, testis-specific OS=Rattus norvegicus OX=10116 GN=Cyct PE=2 SV=2; Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"619.38940"	"1237.77153"	"1237.77427"	"-2.21"	"-0.00137"	"6/50"	"6"	"50"	"5945997.63061523"	"HCD"	"MS2"	"0"	"526.3"	"100.000"	"53.0777"	"16095"	"16095"	"16087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"780.9"	""	"730.9"	""	"674.8"	""	"809.3"	""	"963.8"	"1029.0"	""	"205"	"13"	"30.000"	"23.000"	"0.477225745861033"	"20"	"0.00162"	"0.02243"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ICGNLSK"	"[K].icGNLSk.[K]"	"N-Term(TMT6plex); C2(Methylthio); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"3"	"619.85242"	"1238.69756"	"1238.70012"	"-2.07"	"-0.00128"	"5/54"	"5"	"54"	"14533344.6766968"	"HCD"	"MS2"	"33.33536"	"735.7"	"63.603"	"43.4543"	"12225"	"12225"	"12211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1251.0"	""	"1062.6"	""	"1042.5"	""	"1212.9"	"20.5"	"1191.6"	"1173.1"	""	"612"	"7"	"34.000"	"27.000"	"5.72428734951935"	"14"	"0.00274"	"0.04386"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ICGNLSK"	"[K].icGNLSk.[K]"	"N-Term(TMT6plex); C2(Methylthio); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"3"	"619.85315"	"1238.69902"	"1238.70012"	"-0.89"	"-0.00055"	"5/54"	"5"	"54"	"14193589.6934204"	"HCD"	"MS2"	"25.36"	"679.4"	"62.055"	"43.1857"	"12067"	"12067"	"12058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1121.0"	""	"983.0"	""	"984.2"	""	"1136.4"	"7.8"	"1092.1"	"1097.5"	""	"581"	"7"	"34.000"	"27.000"	"5.48461486912473"	"14"	"0.001966"	"0.03038"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQSFVAK"	"[K].tQSFVAk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"619.87836"	"1238.74944"	"1238.75089"	"-1.18"	"-0.00073"	"12/62"	"12"	"62"	"5855659.60150146"	"HCD"	"MS2"	"0"	"493.6"	"100.000"	"32.7696"	"7823"	"7823"	"7800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"759.2"	""	"743.6"	""	"683.9"	""	"738.4"	""	"841.0"	"906.3"	""	"297"	"39"	"31.000"	"24.000"	"0.00176492580774397"	""	"0.005946"	"0.1997"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQSFVAK"	"[K].tQSFVAk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"619.87848"	"1238.74968"	"1238.75089"	"-0.98"	"-0.00061"	"12/62"	"12"	"62"	"5980793.63366699"	"HCD"	"MS2"	"0"	"471.5"	"100.000"	"32.8583"	"7902"	"7902"	"7878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"729.7"	""	"702.7"	""	"672.8"	""	"674.1"	""	"821.3"	"871.6"	""	"293"	"40"	"31.000"	"24.000"	"0.00162494110435942"	""	"0.005824"	"0.1893"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVPVQK"	"[R].iPVPVQk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AXY7"	"Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1"	"Q6AXY7"	"Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.91510"	"1238.82292"	"1238.82366"	"-0.60"	"-0.00037"	"5/52"	"5"	"52"	"3670528.84191895"	"HCD"	"MS2"	"39.4219"	"306.0"	"100.000"	"41.0385"	"11200"	"11200"	"11173"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"410.3"	""	"413.4"	""	"434.3"	""	"490.6"	"1.7"	"565.5"	"584.6"	""	"41"	"20"	"23.000"	"16.000"	"0.0205472573805969"	"14"	"0.003107"	"0.05894"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVPVQK"	"[R].iPVPVQk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AXY7"	"Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1"	"Q6AXY7"	"Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.91528"	"1238.82329"	"1238.82366"	"-0.30"	"-0.00019"	"5/52"	"5"	"52"	"3927358.20751953"	"HCD"	"MS2"	"45.34843"	"327.0"	"100.000"	"41.2242"	"11320"	"11320"	"11293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"457.0"	""	"435.9"	""	"427.5"	""	"523.3"	"8.7"	"604.2"	"643.0"	""	"30"	"22"	"21.000"	"14.000"	"0.0101412446308797"	"14"	"0.00103"	"0.01284"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSTGTSTTR"	"[K].vTSTGTSTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"620.33978"	"1239.67229"	"1239.67421"	"-1.55"	"-0.00096"	"7/86"	"7"	"86"	"524238.289611816"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"21.7121"	"3433"	"3433"	"3412"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.7"	""	"36.8"	""	"34.3"	""	"70.2"	""	"67.3"	"48.9"	""	"576"	"23"	"34.000"	"27.000"	"0.146013323983115"	"24"	"0.0007076"	"0.006912"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSTGTSTTR"	"[K].vTSTGTSTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"620.34003"	"1239.67278"	"1239.67421"	"-1.16"	"-0.00072"	"7/86"	"7"	"86"	"550288.665466309"	"HCD"	"MS2"	"0"	"29.3"	"100.000"	"21.6668"	"3382"	"3382"	"3365"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.4"	""	"35.5"	""	"29.9"	""	"61.0"	""	"66.7"	"51.2"	""	"570"	"25"	"34.000"	"27.000"	"0.0829554378648983"	"24"	"0.001058"	"0.01382"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIMMDGK"	"[R].sIMMDGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"620.34540"	"1239.68352"	"1239.68414"	"-0.50"	"-0.00031"	"6/56"	"6"	"56"	"6615801.25805664"	"HCD"	"MS2"	"29.97613"	"565.1"	"100.000"	"36.9841"	"9583"	"9583"	"9558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"787.1"	""	"738.2"	""	"765.4"	""	"612.9"	""	"1174.4"	"1289.5"	""	"597"	"30"	"34.000"	"27.000"	"0.0306157099986045"	"18"	"0.0006037"	"0.005542"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIMMDGK"	"[R].sIMMDGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"620.34576"	"1239.68425"	"1239.68414"	"0.09"	"0.00006"	"10/56"	"10"	"56"	"6469603.48986816"	"HCD"	"MS2"	"25.43751"	"581.8"	"100.000"	"36.9069"	"9508"	"9508"	"9482"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"792.5"	""	"773.3"	""	"848.0"	""	"649.5"	""	"1142.6"	"1318.1"	""	"592"	"23"	"34.000"	"27.000"	"0.150415194997926"	"16"	"0.0007793"	"0.00738"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFFELIR"	"[R].gEFFELIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.35022"	"1239.69316"	"1239.69349"	"-0.26"	"-0.00016"	"5/62"	"5"	"62"	"1695427.5715332"	"HCD"	"MS2"	"13.25068"	"98.9"	"100.000"	"61.1086"	"19406"	"19406"	"19379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.5"	""	"137.1"	""	"151.8"	""	"153.2"	"1.1"	"176.6"	"175.2"	""	"534"	"22"	"34.000"	"27.000"	"0.165010378836957"	"14"	"0.0001889"	"0.0006647"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSSVMK"	"[K].mVSSVMk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2;Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"Q5PQN0; P84076; P62749"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"3"	"620.36334"	"1239.71941"	"1239.72052"	"-0.90"	"-0.00056"	"6/50"	"6"	"50"	"10390665.9087524"	"HCD"	"MS2"	"28.30057"	"845.3"	"87.349"	"37.1426"	"9648"	"9648"	"9622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1131.0"	""	"1191.8"	""	"1244.3"	""	"1102.6"	"5.1"	"1653.6"	"1687.6"	""	"439"	"29"	"33.000"	"26.000"	"0.029541634771528"	"16"	"0.0009727"	"0.01036"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSSVMK"	"[K].mVSSVMk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2;Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"Q5PQN0; P84076; P62749"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"3"	"620.36340"	"1239.71953"	"1239.72052"	"-0.80"	"-0.00050"	"6/50"	"6"	"50"	"10368703.1993408"	"HCD"	"MS2"	"43.34526"	"949.9"	"100.000"	"37.0351"	"9561"	"9561"	"9530"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1325.0"	""	"1310.1"	""	"1463.0"	""	"1218.0"	""	"1796.9"	"1897.4"	""	"439"	"27"	"33.000"	"26.000"	"0.0393944031089739"	"17"	"0.0008731"	"0.00923"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVIEFIAR"	"[K].yVIEFIAR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"620.36853"	"1239.72978"	"1239.72988"	"-0.07"	"-0.00005"	"6/56"	"6"	"56"	"10677348.8005371"	"HCD"	"MS2"	"7.438328"	"478.4"	"100.000"	"57.9831"	"18080"	"18080"	"18059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"803.5"	""	"1065.3"	""	"401.3"	""	"838.0"	"6.9"	"785.2"	"621.0"	""	"391"	"37"	"32.000"	"25.000"	"0.00364877229558178"	"23"	"0.0001889"	"0.001082"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVIEFIAR"	"[K].yVIEFIAR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"620.36932"	"1239.73137"	"1239.72988"	"1.21"	"0.00075"	"6/56"	"6"	"56"	"10216475.6033325"	"HCD"	"MS2"	"15.94017"	"469.8"	"100.000"	"58.1477"	"18201"	"18201"	"18181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"774.9"	""	"1091.6"	""	"381.5"	""	"799.5"	"1.2"	"788.1"	"603.3"	""	"383"	"37"	"32.000"	"25.000"	"0.00360718800637297"	"25"	"0.0002277"	"0.001288"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVDYGK"	"[R].lSVDYGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"620.37073"	"1239.73418"	"1239.73491"	"-0.59"	"-0.00037"	"6/52"	"6"	"52"	"88843687.2226563"	"HCD"	"MS2"	"0"	"1078.8"	"15.180"	"38.0076"	"9960"	"9960"	"9943"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1409.4"	""	"1361.0"	""	"1501.6"	""	"1889.8"	"3.2"	"2050.3"	"2011.1"	""	"354"	"20"	"32.000"	"25.000"	"0.198140505373686"	"15"	"0.004883"	"0.1438"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVDYGK"	"[R].lSVDYGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"620.37085"	"1239.73442"	"1239.73491"	"-0.39"	"-0.00024"	"6/52"	"6"	"52"	"107393933.566895"	"HCD"	"MS2"	"0.529736"	"801.6"	"9.676"	"38.1214"	"10050"	"10050"	"10033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1076.8"	""	"1008.8"	""	"1113.9"	""	"1356.2"	"0.3"	"1529.3"	"1514.2"	""	"351"	"22"	"32.000"	"25.000"	"0.114624411989631"	"16"	"0.004883"	"0.1452"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVGFPK"	"[K].fSVGFPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"620.37762"	"1239.74797"	"1239.75017"	"-1.77"	"-0.00110"	"8/48"	"8"	"48"	"3988958.47741699"	"HCD"	"MS2"	"0"	"342.0"	"100.000"	"49.7262"	"14732"	"14732"	"14703"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"527.1"	""	"448.5"	""	"506.6"	""	"556.6"	"4.2"	"591.8"	"602.1"	""	"297"	"17"	"31.000"	"24.000"	"0.311692572718093"	"23"	"0.00175"	"0.02457"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVGFPK"	"[K].fSVGFPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"620.37787"	"1239.74846"	"1239.75017"	"-1.38"	"-0.00085"	"5/48"	"5"	"48"	"3811923.02783203"	"HCD"	"MS2"	"100"	"349.0"	"100.000"	"49.9987"	"14890"	"14890"	"14862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"456.6"	""	"484.3"	""	"517.5"	""	"555.4"	""	"658.3"	"636.5"	""	"297"	"18"	"31.000"	"24.000"	"0.245316327037009"	"19"	"0.001058"	"0.01463"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFAAVK"	"[R].fVFAAVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"620.39594"	"1239.78459"	"1239.78655"	"-1.58"	"-0.00098"	"6/50"	"6"	"50"	"6697518.69335938"	"HCD"	"MS2"	"14.82824"	"557.3"	"100.000"	"53.5235"	"16322"	"16322"	"16309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"619.8"	""	"793.7"	""	"755.4"	""	"894.2"	""	"1115.9"	"1117.9"	""	"137"	"34"	"28.000"	"21.000"	"0.00284243519204538"	""	"0.0006037"	"0.005484"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFAAVK"	"[R].fVFAAVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"620.39612"	"1239.78496"	"1239.78655"	"-1.28"	"-0.00080"	"6/50"	"6"	"50"	"2607211.20129395"	"HCD"	"MS2"	"0"	"213.0"	"100.000"	"53.7937"	"16426"	"16426"	"16414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.9"	""	"277.9"	""	"291.2"	""	"369.4"	""	"417.7"	"439.1"	""	"137"	"33"	"28.000"	"21.000"	"0.00321137166769507"	"20"	"0.0005564"	"0.003564"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFAAVK"	"[R].fVFAAVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"620.39673"	"1239.78618"	"1239.78655"	"-0.30"	"-0.00019"	"6/50"	"6"	"50"	"2820591.03167725"	"HCD"	"MS2"	"0"	"239.6"	"100.000"	"53.5667"	"16281"	"16281"	"16271"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.0"	""	"310.7"	""	"311.0"	""	"389.9"	""	"504.4"	"506.9"	""	"142"	"34"	"28.000"	"21.000"	"0.00317145350427184"	"19"	"0.000523"	"0.003246"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFAAVK"	"[R].fVFAAVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"620.39691"	"1239.78655"	"1239.78655"	"0.00"	"0.00000"	"6/50"	"6"	"50"	"5884850.45703125"	"HCD"	"MS2"	"0"	"474.5"	"100.000"	"53.2851"	"16173"	"16173"	"16164"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"536.1"	""	"660.2"	""	"638.5"	""	"787.5"	""	"952.4"	"931.9"	""	"142"	"34"	"28.000"	"21.000"	"0.0030497086300307"	"20"	"0.0009727"	"0.01072"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQYTDK"	"[K].aGQYTDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"620.84955"	"1240.69182"	"1240.69377"	"-1.57"	"-0.00098"	"6/58"	"6"	"58"	"1459455.88000488"	"HCD"	"MS2"	"0"	"139.9"	"100.000"	"26.8345"	"5444"	"5444"	"5416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"289.0"	""	"172.6"	""	"128.5"	""	"240.5"	""	"248.7"	"244.7"	""	"518"	"32"	"34.000"	"27.000"	"0.0149038943770324"	"17"	"0.0003839"	"0.001563"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQYTDK"	"[K].aGQYTDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"620.85028"	"1240.69328"	"1240.69377"	"-0.39"	"-0.00024"	"6/58"	"6"	"58"	"1394077.21710205"	"HCD"	"MS2"	"0"	"135.7"	"100.000"	"26.8953"	"5505"	"5505"	"5479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.9"	""	"167.0"	""	"136.1"	""	"237.9"	"0.1"	"220.5"	"233.6"	""	"522"	"34"	"34.000"	"27.000"	"0.0102244629925131"	"22"	"0.0003839"	"0.001921"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NAFFLLMR"	"[R].nAFFLLMR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"620.85724"	"1240.70720"	"1240.70737"	"-0.13"	"-0.00008"	"5/72"	"5"	"72"	"1508391.65960693"	"HCD"	"MS2"	"42.11679"	"86.3"	"100.000"	"67.5589"	"21980"	"21980"	"21955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.4"	""	"113.1"	""	"119.9"	""	"143.9"	"2.5"	"148.5"	"172.4"	""	"456"	"7"	"33.000"	"26.000"	"4.18730742283423"	"20"	"0.0002277"	"0.001116"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQAVHK"	"[K].lSQAVHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"414.26376"	"1240.77674"	"1240.77778"	"-0.84"	"-0.00035"	"5/56"	"5"	"56"	"67019854.6650391"	"HCD"	"MS2"	"33.00951"	"789.7"	"22.332"	"27.9774"	"5941"	"5941"	"5921"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1208.7"	""	"1208.8"	""	"1148.1"	""	"1272.2"	""	"1318.6"	"1324.6"	""	"172"	"25"	"29.000"	"22.000"	"0.0296140940456471"	""	"0.000523"	"0.003082"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQAVHK"	"[K].lSQAVHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"620.89203"	"1240.77678"	"1240.77778"	"-0.80"	"-0.00050"	"6/56"	"6"	"56"	"6108587.62371826"	"HCD"	"MS2"	"7.04175"	"421.3"	"100.000"	"27.9907"	"5947"	"5947"	"5921"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"633.2"	""	"617.1"	""	"613.2"	""	"674.6"	""	"733.8"	"718.2"	""	"172"	"30"	"29.000"	"22.000"	"0.00878007955988605"	""	"0.00103"	"0.01294"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQAVHK"	"[K].lSQAVHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"414.26382"	"1240.77692"	"1240.77778"	"-0.69"	"-0.00029"	"5/56"	"5"	"56"	"70850357.3012695"	"HCD"	"MS2"	"23.88529"	"598.4"	"15.208"	"27.9276"	"5886"	"5886"	"5868"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"900.1"	""	"916.8"	""	"880.6"	""	"999.5"	""	"969.5"	"1002.3"	""	"172"	"22"	"29.000"	"22.000"	"0.0521793243446115"	"21"	"0.001966"	"0.03028"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQAVHK"	"[K].lSQAVHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"620.89233"	"1240.77739"	"1240.77778"	"-0.31"	"-0.00019"	"6/56"	"6"	"56"	"4808787.91674805"	"HCD"	"MS2"	"5.085747"	"335.6"	"100.000"	"27.9482"	"5895"	"5895"	"5868"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"495.9"	""	"491.6"	""	"472.2"	""	"559.2"	""	"572.8"	"588.6"	""	"170"	"30"	"29.000"	"22.000"	"0.00894167592749739"	""	"0.0006737"	"0.006493"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVLANVIR"	"[R].lNVLANVIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"620.90015"	"1240.79302"	"1240.79387"	"-0.69"	"-0.00043"	"7/80"	"7"	"80"	"11391854.6278076"	"HCD"	"MS2"	"6.813177"	"441.8"	"88.516"	"59.5675"	"18776"	"18776"	"18757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"620.2"	""	"611.5"	""	"624.0"	""	"702.7"	""	"781.9"	"853.2"	""	"140"	"48"	"28.000"	"21.000"	"0.000107423188795951"	""	"0.0001889"	"0.000724"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVLANVIR"	"[R].lNVLANVIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"620.90057"	"1240.79387"	"1240.79387"	"0.00"	"0.00000"	"7/80"	"7"	"80"	"10501934.3809204"	"HCD"	"MS2"	"9.090642"	"489.0"	"100.000"	"59.4273"	"18666"	"18666"	"18649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"692.3"	""	"687.1"	""	"699.4"	""	"775.9"	""	"859.2"	"923.6"	""	"129"	"51"	"28.000"	"21.000"	"5.06476984323497E-05"	""	"0.0001889"	"0.0008442"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVVIPK"	"[R].nLVVIPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"620.92249"	"1240.83769"	"1240.83932"	"-1.31"	"-0.00081"	"6/62"	"6"	"62"	"18972955.994873"	"HCD"	"MS2"	"14.58503"	"397.3"	"35.927"	"44.5892"	"12688"	"12688"	"12675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"518.0"	""	"524.7"	""	"550.6"	""	"600.7"	""	"759.2"	"824.5"	""	"74"	"37"	"25.000"	"18.000"	"0.000659480143955793"	"16"	"0.005855"	"0.1911"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVVIPK"	"[R].nLVVIPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"620.92273"	"1240.83818"	"1240.83932"	"-0.91"	"-0.00057"	"6/62"	"6"	"62"	"14561489.6737061"	"HCD"	"MS2"	"12.74204"	"839.2"	"100.000"	"44.3302"	"12534"	"12534"	"12518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1076.4"	""	"1129.4"	""	"1194.3"	""	"1219.6"	""	"1591.4"	"1755.8"	""	"74"	"38"	"25.000"	"18.000"	"0.000645954196580587"	"16"	"0.00103"	"0.01295"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVVIPK"	"[R].nLVVIPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"620.92279"	"1240.83830"	"1240.83932"	"-0.81"	"-0.00051"	"6/62"	"6"	"62"	"13816144.3994751"	"HCD"	"MS2"	"15.55695"	"606.7"	"77.863"	"44.0246"	"12408"	"12408"	"12390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"971.5"	""	"923.2"	""	"898.4"	""	"874.5"	"4.2"	"996.5"	"1070.3"	""	"74"	"38"	"25.000"	"18.000"	"0.000585061774530042"	""	"0.001966"	"0.0281"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVVIPK"	"[R].nLVVIPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"414.28433"	"1240.83844"	"1240.83932"	"-0.70"	"-0.00029"	"5/62"	"5"	"62"	"6242227.24206543"	"HCD"	"MS2"	"15.60146"	"252.0"	"100.000"	"44.4129"	"12617"	"12617"	"12588"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"374.7"	""	"382.1"	""	"378.4"	""	"327.1"	""	"412.7"	"512.1"	""	"74"	"26"	"25.000"	"18.000"	"0.0089166500861404"	"14"	"0.0006037"	"0.004879"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPVGGIK"	"[K].vLPVGGIk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"620.92316"	"1240.83904"	"1240.83932"	"-0.22"	"-0.00014"	"6/58"	"6"	"58"	"7653415.65026855"	"HCD"	"MS2"	"15.47837"	"402.3"	"100.000"	"45.3036"	"12979"	"12979"	"12955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"560.7"	""	"545.2"	""	"606.7"	""	"651.5"	"3.6"	"735.6"	"706.8"	""	"54"	"30"	"24.000"	"17.000"	"0.00285340727487688"	""	"0.0003146"	"0.001409"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVVIPK"	"[R].nLVVIPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"620.92322"	"1240.83916"	"1240.83932"	"-0.13"	"-0.00008"	"6/62"	"6"	"62"	"18741379.2416992"	"HCD"	"MS2"	"11.04082"	"668.0"	"67.993"	"44.3049"	"12573"	"12573"	"12556"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1071.7"	""	"1034.2"	""	"1020.5"	""	"959.7"	"4.4"	"1055.1"	"1170.3"	""	"54"	"37"	"24.000"	"17.000"	"0.000598913033346059"	"17"	"0.002804"	"0.04534"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVVIPK"	"[R].nLVVIPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"414.28461"	"1240.83927"	"1240.83932"	"-0.04"	"-0.00002"	"5/62"	"5"	"62"	"6295395.74456787"	"HCD"	"MS2"	"5.864976"	"253.0"	"100.000"	"44.2040"	"12482"	"12482"	"12454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.8"	""	"394.3"	""	"368.0"	""	"358.3"	""	"406.2"	"509.9"	""	"54"	"25"	"24.000"	"17.000"	"0.00865692717616476"	"15"	"0.0006037"	"0.00549"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPVGGIK"	"[K].vLPVGGIk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"620.92334"	"1240.83940"	"1240.83932"	"0.07"	"0.00004"	"6/58"	"6"	"58"	"7349883.22869873"	"HCD"	"MS2"	"25.83512"	"380.9"	"100.000"	"45.0441"	"12824"	"12824"	"12800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"509.0"	""	"520.7"	""	"534.2"	""	"639.3"	""	"693.4"	"713.5"	""	"54"	"31"	"24.000"	"17.000"	"0.00211526003546877"	""	"0.000494"	"0.002663"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGYVSGWGR"	"[R].mGYVSGWGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.31781"	"1241.62834"	"1241.62984"	"-1.21"	"-0.00075"	"6/64"	"6"	"64"	"12020553.2556152"	"HCD"	"MS2"	"13.89451"	"775.5"	"100.000"	"41.1051"	"11227"	"11227"	"11205"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1521.6"	""	"1085.9"	""	"860.0"	""	"887.9"	""	"1526.4"	"1466.6"	""	"424"	"32"	"33.000"	"26.000"	"0.0131019476829344"	"15"	"0.0001889"	"0.0005583"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGYVSGWGR"	"[R].mGYVSGWGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.31805"	"1241.62883"	"1241.62984"	"-0.81"	"-0.00051"	"6/64"	"6"	"64"	"11490124.4219971"	"HCD"	"MS2"	"7.501766"	"708.5"	"100.000"	"41.2837"	"11344"	"11344"	"11325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1428.1"	""	"1000.8"	""	"787.4"	""	"775.3"	""	"1394.5"	"1330.7"	""	"424"	"32"	"33.000"	"26.000"	"0.012570016881096"	"15"	"0.0001889"	"0.0005474"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGYMPK"	"[R].gMGYMPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.3793"	"0.0000"	"1"	"1"	"1"	"621.34222"	"1241.67717"	"1241.67866"	"-1.20"	"-0.00074"	"5/50"	"5"	"50"	"12528788.8216553"	"HCD"	"MS2"	"18.30898"	"1084.6"	"100.000"	"36.0838"	"9170"	"9170"	"9146"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1834.0"	""	"1320.8"	""	"1248.1"	""	"1428.7"	""	"2154.3"	"2305.1"	""	"527"	"29"	"34.000"	"27.000"	"0.0297701223516282"	""	"0.0007076"	"0.006909"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGYMPK"	"[R].gMGYMPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"621.34271"	"1241.67815"	"1241.67866"	"-0.41"	"-0.00025"	"5/50"	"5"	"50"	"12801444.8475342"	"HCD"	"MS2"	"11.32282"	"1088.6"	"100.000"	"36.1592"	"9244"	"9244"	"9225"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1809.8"	""	"1339.6"	""	"1299.9"	""	"1374.8"	""	"2146.5"	"2364.4"	""	"512"	"30"	"34.000"	"27.000"	"0.0283295688698283"	""	"0.00103"	"0.01135"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGFVDSK"	"[K].mGFVDSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.35114"	"1241.69499"	"1241.69642"	"-1.14"	"-0.00071"	"6/50"	"6"	"50"	"11848923.0872192"	"HCD"	"MS2"	"3.569434"	"1072.0"	"100.000"	"38.8369"	"10300"	"10300"	"10278"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1050.4"	""	"1309.4"	""	"1114.6"	""	"1467.1"	""	"2502.0"	"2770.9"	""	"489"	"19"	"33.000"	"26.000"	"0.302189147477183"	"14"	"0.0009404"	"0.01026"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGMTPSK"	"[K].fGmTPSk.[G]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.35126"	"1241.69524"	"1241.69642"	"-0.95"	"-0.00059"	"5/52"	"5"	"52"	"5581476.95605469"	"HCD"	"MS2"	"15.6697"	"390.5"	"100.000"	"32.0960"	"7590"	"7590"	"7562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"471.7"	""	"427.4"	""	"458.8"	""	"807.6"	""	"787.8"	"755.8"	""	"489"	"21"	"33.000"	"26.000"	"0.207147102757376"	"14"	"0.008648"	"0.377"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGMTPSK"	"[K].fGmTPSk.[G]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.35156"	"1241.69585"	"1241.69642"	"-0.46"	"-0.00028"	"6/52"	"6"	"52"	"5539282.06542969"	"HCD"	"MS2"	"12.77891"	"377.9"	"100.000"	"31.9774"	"7499"	"7499"	"7474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.8"	""	"429.1"	""	"459.5"	""	"749.2"	""	"784.5"	"742.5"	""	"495"	"22"	"33.000"	"26.000"	"0.155444443806296"	"14"	"0.007843"	"0.3155"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGFVDSK"	"[K].mGFVDSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.35162"	"1241.69597"	"1241.69642"	"-0.36"	"-0.00022"	"6/50"	"6"	"50"	"13661468.1334839"	"HCD"	"MS2"	"0"	"1064.3"	"92.090"	"38.9435"	"10387"	"10387"	"10366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1016.6"	""	"1312.5"	""	"1066.4"	""	"1456.6"	"0.3"	"2527.3"	"2764.2"	""	"493"	"21"	"33.000"	"26.000"	"0.185702146460361"	"14"	"0.001058"	"0.01413"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMVAGFK"	"[K].mMVAGFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.36072"	"1241.71416"	"1241.71504"	"-0.71"	"-0.00044"	"10/50"	"10"	"50"	"19514531.3444824"	"HCD"	"MS2"	"36.8665"	"663.6"	"40.304"	"45.3425"	"12946"	"12946"	"12928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"993.7"	""	"815.4"	""	"750.5"	""	"853.8"	""	"1472.8"	"1419.6"	""	"421"	"27"	"33.000"	"26.000"	"0.0462649503221206"	"14"	"0.001158"	"0.01541"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMVAGFK"	"[K].mMVAGFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.36078"	"1241.71428"	"1241.71504"	"-0.61"	"-0.00038"	"10/50"	"10"	"50"	"17434364.197998"	"HCD"	"MS2"	"26.3881"	"759.1"	"53.952"	"45.5952"	"13098"	"13098"	"13083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1134.6"	""	"935.3"	""	"829.0"	""	"969.5"	""	"1713.5"	"1632.3"	""	"421"	"26"	"33.000"	"26.000"	"0.0593269607031167"	"14"	"0.00103"	"0.01114"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPQTVLWR"	"[R].iPQTVLWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64550"	"UDP-glucuronosyltransferase 1-1 OS=Rattus norvegicus OX=10116 GN=Ugt1a1 PE=1 SV=1"	"Q64550"	"UDP-glucuronosyltransferase 1-1 OS=Rattus norvegicus OX=10116 GN=Ugt1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"621.38214"	"1241.75701"	"1241.75676"	"0.20"	"0.00012"	"7/66"	"7"	"66"	"6916432.88757324"	"HCD"	"MS2"	"27.08592"	"268.9"	"100.000"	"51.8818"	"15657"	"15657"	"15638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"349.6"	""	"367.7"	""	"384.5"	""	"428.9"	"11.2"	"510.7"	"496.6"	""	"344"	"17"	"32.000"	"25.000"	"0.373704602764564"	"19"	"0.003286"	"0.07345"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPQTVLWR"	"[R].iPQTVLWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64550"	"UDP-glucuronosyltransferase 1-1 OS=Rattus norvegicus OX=10116 GN=Ugt1a1 PE=1 SV=1"	"Q64550"	"UDP-glucuronosyltransferase 1-1 OS=Rattus norvegicus OX=10116 GN=Ugt1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"621.38281"	"1241.75835"	"1241.75676"	"1.28"	"0.00079"	"10/66"	"10"	"66"	"6889467.56939697"	"HCD"	"MS2"	"22.82004"	"270.1"	"100.000"	"51.6817"	"15525"	"15525"	"15506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.9"	""	"363.5"	""	"411.1"	""	"399.5"	"11.4"	"528.2"	"497.6"	""	"319"	"11"	"32.000"	"25.000"	"1.36697536314244"	"16"	"0.005603"	"0.1777"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPGGGLK"	"[K].gVVPGGGLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"621.40167"	"1241.79607"	"1241.79818"	"-1.70"	"-0.00106"	"13/66"	"13"	"66"	"3853817.13671875"	"HCD"	"MS2"	"0"	"284.8"	"100.000"	"35.9370"	"9110"	"9110"	"9083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.9"	""	"366.1"	""	"376.9"	""	"517.1"	"0.7"	"560.0"	"519.2"	""	"225"	"37"	"30.000"	"23.000"	"0.00205188266510959"	""	"0.0001889"	"0.0004052"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGFGDSR"	"[R].gGNFGFGDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"621.80664"	"1242.60600"	"1242.60647"	"-0.37"	"-0.00023"	"8/88"	"8"	"88"	"2408912.2868042"	"HCD"	"MS2"	"11.76635"	"186.5"	"100.000"	"34.5037"	"8522"	"8522"	"8499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.4"	""	"208.8"	""	"206.7"	""	"331.3"	""	"377.3"	"383.6"	""	"361"	"37"	"32.000"	"25.000"	"0.00335333704144052"	"19"	"0.0001889"	"0.0006774"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGFGDSR"	"[R].gGNFGFGDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"621.80688"	"1242.60649"	"1242.60647"	"0.02"	"0.00001"	"8/88"	"8"	"88"	"2776720.51617432"	"HCD"	"MS2"	"7.737453"	"198.8"	"100.000"	"34.5357"	"8578"	"8578"	"8554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.5"	""	"216.9"	"2.1"	"219.6"	""	"356.3"	"1.2"	"399.1"	"407.0"	""	"361"	"41"	"32.000"	"25.000"	"0.00141409050519301"	"21"	"0"	"0.0001485"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.82904"	"1242.65080"	"1242.67540"	"-19.79"	"-0.01230"	"6/66"	"6"	"66"	"1970822.29449463"	"HCD"	"MS2"	"52.10384"	"109.7"	"100.000"	"60.3225"	"19085"	"19085"	"19059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.4"	""	"141.6"	""	"143.9"	""	"179.7"	""	"214.6"	"206.3"	""	"513"	"29"	"34.000"	"27.000"	"0.0291130274219949"	"14"	"0.008989"	"0.4003"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.84003"	"1242.67278"	"1242.67540"	"-2.11"	"-0.00131"	"3/66"	"3"	"66"	"157486.876220703"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"99.6146"	"34072"	"34072"	"34067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.1"	""	"6.4"	""	"4.0"	""	"5.7"	""	"6.3"	"8.8"	""	"522"	"8"	"34.000"	"27.000"	"4.02383818219835"	"13"	"0.00955"	"0.4264"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.84027"	"1242.67327"	"1242.67540"	"-1.72"	"-0.00107"	"6/66"	"6"	"66"	"3763022.88616943"	"HCD"	"MS2"	"0"	"225.8"	"100.000"	"43.0996"	"12035"	"12035"	"12027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.3"	""	"275.2"	""	"289.5"	""	"386.4"	""	"465.4"	"460.1"	""	"524"	"26"	"34.000"	"27.000"	"0.0589252306728974"	"14"	"0.002711"	"0.04166"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.84039"	"1242.67351"	"1242.67540"	"-1.52"	"-0.00094"	"8/66"	"8"	"66"	"21466337.5930176"	"HCD"	"MS2"	"24.2629"	"590.7"	"91.128"	"42.3544"	"11780"	"11780"	"11767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"573.0"	"3.8"	"578.3"	""	"716.5"	""	"1216.8"	""	"1301.0"	"1228.3"	""	"523"	"53"	"34.000"	"27.000"	"0.00013660660342327"	"16"	"0.0008731"	"0.009279"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.84082"	"1242.67436"	"1242.67540"	"-0.83"	"-0.00052"	"7/66"	"7"	"66"	"3437459.15423584"	"HCD"	"MS2"	"39.90805"	"192.7"	"100.000"	"45.0389"	"12871"	"12871"	"12843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"233.2"	"2.8"	"257.9"	""	"271.8"	""	"318.8"	"0.1"	"370.3"	"372.6"	""	"527"	"39"	"34.000"	"27.000"	"0.00309585505726566"	"15"	"0.001158"	"0.01529"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.84094"	"1242.67461"	"1242.67540"	"-0.63"	"-0.00039"	"8/66"	"8"	"66"	"24278042.1727295"	"HCD"	"MS2"	"14.69069"	"751.9"	"100.000"	"42.1318"	"11645"	"11645"	"11631"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"707.6"	""	"752.3"	""	"877.9"	""	"1546.6"	"5.7"	"1666.5"	"1594.7"	""	"528"	"53"	"34.000"	"27.000"	"0.000137278943084848"	"16"	"0.0008731"	"0.009396"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.84100"	"1242.67473"	"1242.67540"	"-0.54"	"-0.00033"	"6/66"	"6"	"66"	"1738024.7590332"	"HCD"	"MS2"	"44.23212"	"104.0"	"100.000"	"56.0972"	"17364"	"17364"	"17333"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.7"	""	"120.9"	""	"150.1"	""	"169.7"	"0.5"	"217.0"	"202.7"	""	"528"	"19"	"34.000"	"27.000"	"0.370342818004357"	"14"	"0.001158"	"0.01526"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"414.89648"	"1242.67490"	"1242.67540"	"-0.40"	"-0.00017"	"7/66"	"7"	"66"	"4084372.66851807"	"HCD"	"MS2"	"0"	"175.2"	"100.000"	"42.4986"	"11839"	"11839"	"11811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.7"	""	"167.9"	""	"218.5"	""	"345.1"	""	"386.6"	"381.8"	""	"528"	"17"	"34.000"	"27.000"	"0.58830687940736"	"14"	"0.005448"	"0.172"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTK.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"621.84119"	"1242.67510"	"1242.67540"	"-0.24"	"-0.00015"	"6/66"	"6"	"66"	"11272467.2800903"	"HCD"	"MS2"	"18.58821"	"294.3"	"100.000"	"46.7047"	"13499"	"13499"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"355.8"	""	"397.5"	""	"369.3"	""	"524.3"	"2.6"	"578.9"	"564.0"	""	"526"	"33"	"34.000"	"27.000"	"0.0128219992897191"	"19"	"0.0001308"	"0.0002968"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTK.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"621.84131"	"1242.67534"	"1242.67540"	"-0.05"	"-0.00003"	"6/66"	"6"	"66"	"11169922.1494751"	"HCD"	"MS2"	"13.76923"	"284.3"	"100.000"	"46.9641"	"13653"	"13653"	"13634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.7"	""	"381.0"	""	"387.1"	""	"470.7"	""	"536.3"	"554.2"	""	"526"	"40"	"34.000"	"27.000"	"0.00270368286407263"	"24"	"0.0001889"	"0.0005404"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"621.84137"	"1242.67546"	"1242.67540"	"0.05"	"0.00003"	"7/66"	"7"	"66"	"3603469.41998291"	"HCD"	"MS2"	"31.61263"	"188.6"	"100.000"	"44.6647"	"12669"	"12669"	"12646"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.3"	""	"248.9"	""	"241.6"	""	"315.0"	""	"381.0"	"366.5"	""	"526"	"33"	"34.000"	"27.000"	"0.0129406397884222"	"16"	"0.001454"	"0.02025"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"621.84235"	"1242.67742"	"1242.67540"	"1.62"	"0.00101"	"6/66"	"6"	"66"	"3992393.6027832"	"HCD"	"MS2"	"29.88705"	"236.4"	"100.000"	"46.4172"	"13382"	"13382"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"356.4"	""	"367.0"	""	"374.2"	""	"312.7"	""	"414.6"	"412.7"	""	"542"	"28"	"34.000"	"27.000"	"0.0464482430334783"	"16"	"0.002925"	"0.05021"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].MFAAFPTTk.[T]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.84265"	"1242.67803"	"1242.67540"	"2.12"	"0.00131"	"5/66"	"5"	"66"	"3969299.37487793"	"HCD"	"MS2"	"30.27827"	"232.8"	"100.000"	"46.6679"	"13532"	"13532"	"13506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.9"	""	"365.2"	""	"339.6"	""	"333.2"	"2.6"	"421.1"	"411.5"	""	"527"	"29"	"34.000"	"27.000"	"0.0324923123555817"	"14"	"0.002297"	"0.03414"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSFYAK"	"[R].gLSFYAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"622.37524"	"1243.74321"	"1243.74508"	"-1.50"	"-0.00093"	"12/48"	"12"	"48"	"22307977.265625"	"HCD"	"MS2"	"29.1643"	"330.9"	"20.423"	"42.8318"	"11975"	"11975"	"11955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"370.5"	""	"399.6"	""	"356.1"	""	"748.7"	""	"675.0"	"593.6"	""	"565"	"13"	"34.000"	"27.000"	"1.33665230656618"	"17"	"0.001945"	"0.02752"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSFYAK"	"[R].gLSFYAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.37531"	"1243.74333"	"1243.74508"	"-1.40"	"-0.00087"	"12/48"	"12"	"48"	"22059256.7009277"	"HCD"	"MS2"	"33.08587"	"460.9"	"29.092"	"42.5681"	"11823"	"11823"	"11804"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"555.6"	""	"578.8"	""	"525.7"	""	"1006.5"	""	"889.6"	"817.1"	""	"565"	"14"	"34.000"	"27.000"	"1.14029823513349"	"13"	"0.002165"	"0.03247"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGFSFK"	"[K].lSGFSFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"622.37537"	"1243.74346"	"1243.74508"	"-1.31"	"-0.00081"	"10/54"	"10"	"54"	"15085954.8881836"	"HCD"	"MS2"	"45.76368"	"738.1"	"80.142"	"51.9969"	"15704"	"15704"	"15686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"665.7"	""	"841.4"	""	"820.6"	""	"1580.9"	"1.1"	"1665.5"	"1443.5"	""	"565"	"14"	"34.000"	"27.000"	"1.21344040561081"	"17"	"0.001966"	"0.02764"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGFSFK"	"[K].lSGFSFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"P30009"	"Myristoylated alanine-rich C-kinase substrate OS=Rattus norvegicus OX=10116 GN=Marcks PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"622.37567"	"1243.74407"	"1243.74508"	"-0.82"	"-0.00051"	"10/54"	"10"	"54"	"14451949.8991089"	"HCD"	"MS2"	"48.30704"	"778.2"	"89.720"	"51.8018"	"15574"	"15574"	"15554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"715.9"	""	"895.6"	""	"898.0"	""	"1653.3"	"0.4"	"1706.6"	"1527.8"	""	"648"	"14"	"35.000"	"28.000"	"1.40457524597559"	"16"	"0.001058"	"0.01408"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFSSLK"	"[K].gFFSSLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"622.37823"	"1243.74919"	"1243.74508"	"3.31"	"0.00206"	"6/50"	"6"	"50"	"6048852.19030762"	"HCD"	"MS2"	"0"	"457.9"	"100.000"	"50.0583"	"14914"	"14914"	"14894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"593.0"	""	"619.4"	""	"667.1"	""	"752.1"	"2.8"	"865.3"	"839.8"	""	"588"	"16"	"34.000"	"27.000"	"0.78225316758085"	"16"	"0.001058"	"0.01439"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISPLLK"	"[R].dISPLLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"622.40436"	"1243.80144"	"1243.80260"	"-0.93"	"-0.00058"	"5/52"	"5"	"52"	"3498408.30023193"	"HCD"	"MS2"	"38.14291"	"251.6"	"100.000"	"46.2409"	"13309"	"13309"	"13288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.9"	""	"287.3"	""	"308.7"	""	"430.1"	""	"517.8"	"520.4"	""	"354"	"17"	"32.000"	"25.000"	"0.331110738844747"	"17"	"0.0005564"	"0.003321"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISPLLK"	"[R].dISPLLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"622.40442"	"1243.80156"	"1243.80260"	"-0.83"	"-0.00052"	"5/52"	"5"	"52"	"4399031.43280029"	"HCD"	"MS2"	"34.49043"	"304.8"	"100.000"	"46.4751"	"13453"	"13453"	"13429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"393.8"	""	"350.7"	""	"353.8"	""	"533.2"	""	"623.6"	"640.2"	""	"354"	"16"	"32.000"	"25.000"	"0.457060053742323"	"14"	"0.0008125"	"0.007578"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISPLLK"	"[R].dISPLLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"622.40442"	"1243.80156"	"1243.80260"	"-0.83"	"-0.00052"	"10/52"	"10"	"52"	"21397103.4725342"	"HCD"	"MS2"	"36.70835"	"747.4"	"53.506"	"46.1496"	"13320"	"13320"	"13296"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"946.3"	""	"886.3"	""	"914.4"	""	"1400.2"	"2.6"	"1503.1"	"1439.3"	""	"354"	"23"	"32.000"	"25.000"	"0.0805328866465586"	"21"	"0.001058"	"0.01457"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISPLLK"	"[R].dISPLLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"622.40466"	"1243.80205"	"1243.80260"	"-0.44"	"-0.00027"	"10/52"	"10"	"52"	"19086841.9916382"	"HCD"	"MS2"	"33.58447"	"958.5"	"75.745"	"45.9038"	"13171"	"13171"	"13149"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1231.0"	""	"1070.1"	""	"1149.3"	""	"1796.3"	"7.8"	"1950.2"	"1893.6"	""	"354"	"20"	"32.000"	"25.000"	"0.177408027139788"	"19"	"0.001058"	"0.01333"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQQLVAK"	"[R].vQQLVAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A1L134"	"Ancient ubiquitous protein 1 OS=Rattus norvegicus OX=10116 GN=Aup1 PE=2 SV=1"	"A1L134"	"Ancient ubiquitous protein 1 OS=Rattus norvegicus OX=10116 GN=Aup1 PE=2 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"622.40875"	"1243.81023"	"1243.81383"	"-2.89"	"-0.00180"	"6/60"	"6"	"60"	"3122314.87243652"	"HCD"	"MS2"	"29.23002"	"264.9"	"100.000"	"37.3761"	"9744"	"9744"	"9713"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.8"	""	"343.8"	""	"357.7"	""	"457.8"	""	"508.0"	"524.0"	""	"264"	"28"	"31.000"	"24.000"	"0.0225202875348412"	"17"	"0.0007076"	"0.00702"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINNAIK"	"[R].lINNAIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"622.40942"	"1243.81157"	"1243.81383"	"-1.82"	"-0.00113"	"6/58"	"6"	"58"	"9096795.38891602"	"HCD"	"MS2"	"31.37096"	"656.8"	"100.000"	"38.5403"	"10222"	"10222"	"10193"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"919.8"	""	"874.1"	""	"797.2"	""	"1126.7"	""	"1244.4"	"1268.0"	""	"267"	"32"	"31.000"	"24.000"	"0.00804417047409267"	""	"0.0006037"	"0.005931"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINNAIK"	"[R].lINNAIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"622.40979"	"1243.81230"	"1243.81383"	"-1.23"	"-0.00076"	"6/58"	"6"	"58"	"11325278.6762085"	"HCD"	"MS2"	"5.619425"	"786.9"	"100.000"	"38.4885"	"10157"	"10157"	"10135"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1068.6"	""	"994.0"	""	"986.6"	""	"1328.2"	"1.6"	"1509.7"	"1574.7"	""	"261"	"35"	"31.000"	"24.000"	"0.00381601885308555"	""	"0.0006037"	"0.005863"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQQLVAK"	"[R].vQQLVAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A1L134"	"Ancient ubiquitous protein 1 OS=Rattus norvegicus OX=10116 GN=Aup1 PE=2 SV=1"	"A1L134"	"Ancient ubiquitous protein 1 OS=Rattus norvegicus OX=10116 GN=Aup1 PE=2 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"622.41016"	"1243.81304"	"1243.81383"	"-0.64"	"-0.00040"	"12/60"	"12"	"60"	"2476406.21588135"	"HCD"	"MS2"	"47.13026"	"225.0"	"100.000"	"37.2966"	"9668"	"9668"	"9640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"292.4"	""	"284.6"	""	"277.5"	""	"407.3"	"2.3"	"445.6"	"424.8"	""	"261"	"23"	"31.000"	"24.000"	"0.0669284106108732"	"19"	"0.0008125"	"0.007627"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGELLK"	"[K].lLGELLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.3913"	"0.0000"	"1"	"1"	"1"	"415.28363"	"1243.83634"	"1243.83898"	"-2.12"	"-0.00088"	"5/48"	"5"	"48"	"1752364.19329834"	"HCD"	"MS2"	"0"	"93.1"	"100.000"	"64.1236"	"20637"	"20637"	"20611"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.4"	""	"142.2"	""	"131.3"	""	"161.6"	""	"162.3"	"161.1"	""	"125"	"23"	"27.000"	"20.000"	"0.0293683817878259"	""	"0.001999"	"0.03139"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IGIEIIK"	"[K].iGIEIIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"622.42218"	"1243.83708"	"1243.83898"	"-1.53"	"-0.00095"	"5/48"	"5"	"48"	"21238278.5238037"	"HCD"	"MS2"	"4.977013"	"681.8"	"42.416"	"52.9723"	"16053"	"16053"	"16034"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1044.9"	""	"1002.8"	""	"1122.6"	""	"1039.4"	""	"1146.2"	"1095.9"	""	"131"	"20"	"28.000"	"21.000"	"0.064304490267809"	""	"0.003286"	"0.07141"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGIEIIK"	"[K].iGIEIIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"622.42249"	"1243.83769"	"1243.83898"	"-1.03"	"-0.00064"	"6/48"	"6"	"48"	"17787489.8622437"	"HCD"	"MS2"	"7.601647"	"1201.5"	"100.000"	"53.1341"	"16169"	"16169"	"16150"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1875.5"	""	"1772.1"	""	"1918.6"	""	"1827.5"	"0.7"	"1974.5"	"1991.3"	""	"131"	"21"	"28.000"	"21.000"	"0.0516703377040153"	""	"0.00252"	"0.03845"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVILELK"	"[R].aVILELk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"622.42261"	"1243.83794"	"1243.83898"	"-0.84"	"-0.00052"	"12/48"	"12"	"48"	"4494931.89990234"	"HCD"	"MS2"	"37.50738"	"306.4"	"100.000"	"52.3950"	"15817"	"15817"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"454.4"	""	"460.6"	""	"455.0"	""	"462.8"	""	"522.9"	"548.4"	""	"131"	"39"	"28.000"	"21.000"	"0.000753774254758606"	""	"0.0006737"	"0.006693"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVILELK"	"[R].aVILELk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"622.42261"	"1243.83794"	"1243.83898"	"-0.84"	"-0.00052"	"12/48"	"12"	"48"	"4946263.38775635"	"HCD"	"MS2"	"31.72656"	"343.1"	"100.000"	"52.6024"	"15952"	"15952"	"15926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"521.3"	""	"519.0"	""	"520.9"	""	"510.8"	"1.0"	"584.1"	"589.3"	""	"131"	"37"	"28.000"	"21.000"	"0.0012252968019396"	""	"0.0006037"	"0.004372"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGELLK"	"[K].lLGELLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"622.42279"	"1243.83830"	"1243.83898"	"-0.54"	"-0.00034"	"6/48"	"6"	"48"	"18237941.3500977"	"HCD"	"MS2"	"1.207198"	"437.6"	"35.434"	"64.2182"	"20676"	"20676"	"20659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"614.6"	""	"632.3"	""	"632.7"	""	"710.2"	""	"737.8"	"821.1"	""	"131"	"32"	"28.000"	"21.000"	"0.00376913158955838"	""	"0.001846"	"0.02594"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLAELK"	"[K].vLLAELk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"622.42279"	"1243.83830"	"1243.83898"	"-0.54"	"-0.00034"	"5/48"	"5"	"48"	"3433017.30651855"	"HCD"	"MS2"	"42.22977"	"226.1"	"100.000"	"54.6029"	"16752"	"16752"	"16725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.2"	""	"308.3"	""	"334.3"	""	"361.6"	""	"402.9"	"420.1"	""	"131"	"29"	"28.000"	"21.000"	"0.0080582604488211"	""	"0.0004166"	"0.002423"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLAELK"	"[K].vLLAELk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"622.42279"	"1243.83830"	"1243.83898"	"-0.54"	"-0.00034"	"6/48"	"6"	"48"	"3515625.67779541"	"HCD"	"MS2"	"43.74528"	"238.7"	"100.000"	"54.4333"	"16629"	"16629"	"16609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"345.3"	""	"341.5"	""	"355.1"	""	"387.9"	""	"400.6"	"431.8"	""	"131"	"34"	"28.000"	"21.000"	"0.00243355575058648"	""	"0.000523"	"0.003042"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGELLK"	"[K].lLGELLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.3214"	"0.0000"	"1"	"1"	"1"	"415.28430"	"1243.83835"	"1243.83898"	"-0.51"	"-0.00021"	"5/48"	"5"	"48"	"2070808.30883789"	"HCD"	"MS2"	"7.724797"	"108.2"	"100.000"	"63.9593"	"20517"	"20517"	"20489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.8"	""	"153.4"	""	"169.3"	""	"179.4"	""	"176.8"	"187.2"	""	"131"	"28"	"28.000"	"21.000"	"0.0112782391661584"	""	"0.00109"	"0.01507"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLAELK"	"[K].vLLAELk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"622.42291"	"1243.83855"	"1243.83898"	"-0.35"	"-0.00022"	"5/48"	"5"	"48"	"2114297.07952881"	"HCD"	"MS2"	"20.11029"	"149.0"	"100.000"	"54.7414"	"16755"	"16755"	"16736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.7"	""	"194.4"	""	"217.3"	""	"252.7"	""	"279.1"	"287.9"	""	"130"	"21"	"28.000"	"21.000"	"0.049307542376897"	""	"0.0006737"	"0.00647"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLAELK"	"[K].vLLAELk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"622.42291"	"1243.83855"	"1243.83898"	"-0.35"	"-0.00022"	"5/48"	"5"	"48"	"2459681.66430664"	"HCD"	"MS2"	"13.35038"	"156.1"	"100.000"	"54.9063"	"16876"	"16876"	"16853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.3"	""	"195.5"	""	"221.3"	""	"254.1"	""	"294.0"	"304.0"	""	"130"	"31"	"28.000"	"21.000"	"0.00473056872948936"	""	"0.0004166"	"0.002454"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGELLK"	"[K].lLGELLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"622.42316"	"1243.83904"	"1243.83898"	"0.05"	"0.00003"	"6/48"	"6"	"48"	"15835128.3111572"	"HCD"	"MS2"	"9.962601"	"1024.6"	"100.000"	"63.9142"	"20551"	"20551"	"20531"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1552.0"	""	"1440.2"	""	"1577.8"	""	"1686.2"	""	"1681.1"	"1754.6"	""	"90"	"31"	"26.000"	"19.000"	"0.00361586754983528"	""	"0.001587"	"0.02169"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGELLK"	"[K].lLGELLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"622.42328"	"1243.83928"	"1243.83898"	"0.24"	"0.00015"	"6/48"	"6"	"48"	"25633673.5349121"	"HCD"	"MS2"	"0.9244306"	"671.2"	"36.591"	"64.1277"	"20586"	"20586"	"20569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"959.2"	""	"952.5"	""	"1020.4"	""	"1051.7"	""	"1143.8"	"1226.2"	""	"90"	"31"	"26.000"	"19.000"	"0.00366616927809378"	""	"0.00286"	"0.04929"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGELLK"	"[K].lLGELLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"622.42328"	"1243.83928"	"1243.83898"	"0.24"	"0.00015"	"6/48"	"6"	"48"	"10142859.8464661"	"HCD"	"MS2"	"18.53127"	"670.8"	"100.000"	"63.8304"	"20464"	"20464"	"20441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"977.7"	""	"948.2"	""	"997.1"	""	"1135.4"	""	"1101.4"	"1190.8"	""	"90"	"32"	"26.000"	"19.000"	"0.00266202735378963"	""	"0.0007793"	"0.007248"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQSNAILR"	"[K].iTQSNAILR.[Y]"	"N-Term(TMT6plex)"	"3"	"3"	"P08010; P08009; Q9Z1B2"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"P08010; P08009; Q9Z1B2"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"622.87939"	"1244.75151"	"1244.75240"	"-0.71"	"-0.00044"	"7/80"	"7"	"80"	"5940197.27069092"	"HCD"	"MS2"	"0"	"283.1"	"100.000"	"35.1253"	"8820"	"8820"	"8794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"443.0"	""	"464.5"	""	"439.9"	""	"402.1"	"1.1"	"441.3"	"484.1"	""	"704"	"42"	"35.000"	"28.000"	"0.00244648559791256"	""	"0.0001889"	"0.0003944"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQSNAILR"	"[K].iTQSNAILR.[Y]"	"N-Term(TMT6plex)"	"3"	"3"	"P08010; P08009; Q9Z1B2"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"P08010; P08009; Q9Z1B2"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"622.88013"	"1244.75298"	"1244.75240"	"0.46"	"0.00029"	"7/80"	"7"	"80"	"6012880.81335449"	"HCD"	"MS2"	"0"	"295.4"	"100.000"	"35.0769"	"8757"	"8757"	"8734"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"471.4"	""	"480.4"	""	"471.8"	""	"432.5"	""	"441.7"	"493.8"	""	"714"	"42"	"35.000"	"28.000"	"0.00245283433085081"	""	"0.0001859"	"0.0003734"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPNAPK"	"[K].fLPNAPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"415.59711"	"1244.77677"	"1244.77671"	"0.04"	"0.00002"	"5/56"	"5"	"56"	"1702745.60235596"	"HCD"	"MS2"	"19.16847"	"97.1"	"100.000"	"40.9924"	"11225"	"11225"	"11197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.7"	""	"132.9"	""	"139.9"	""	"155.5"	"4.2"	"169.6"	"197.8"	""	"538"	"9"	"34.000"	"27.000"	"3.4021407746974"	"13"	"0.002393"	"0.0353"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMPAQLK"	"[R].vMPAQLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"622.89337"	"1244.77947"	"1244.78009"	"-0.50"	"-0.00031"	"6/54"	"6"	"54"	"7165783.1975708"	"HCD"	"MS2"	"31.78367"	"547.2"	"100.000"	"38.8838"	"10363"	"10363"	"10334"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"856.5"	""	"766.1"	""	"705.3"	""	"599.0"	""	"1121.9"	"1149.3"	""	"423"	"33"	"33.000"	"26.000"	"0.00962299747217353"	"22"	"0.0006037"	"0.005305"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMPAQLK"	"[R].vMPAQLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"622.89362"	"1244.77995"	"1244.78009"	"-0.11"	"-0.00007"	"6/54"	"6"	"54"	"8202139.38879395"	"HCD"	"MS2"	"23.82073"	"635.2"	"100.000"	"38.7727"	"10274"	"10274"	"10246"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"982.1"	""	"874.7"	""	"852.6"	""	"704.0"	""	"1273.2"	"1343.2"	""	"419"	"32"	"33.000"	"26.000"	"0.0130371909742939"	"24"	"0.0006037"	"0.005827"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILQAVK"	"[K].dILQAVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"622.90198"	"1244.79668"	"1244.79784"	"-0.94"	"-0.00058"	"6/54"	"6"	"54"	"16827141.9798584"	"HCD"	"MS2"	"32.30817"	"629.4"	"53.122"	"43.4836"	"12188"	"12188"	"12171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"851.3"	""	"829.6"	""	"838.1"	""	"1058.2"	""	"1216.7"	"1179.9"	""	"332"	"36"	"32.000"	"25.000"	"0.00401890821758206"	""	"0.0008125"	"0.007465"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILQAVK"	"[K].dILQAVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"622.90198"	"1244.79668"	"1244.79784"	"-0.94"	"-0.00058"	"6/54"	"6"	"54"	"16584574.225708"	"HCD"	"MS2"	"30.55952"	"658.4"	"55.708"	"43.7245"	"12335"	"12335"	"12317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"893.5"	""	"856.8"	""	"900.3"	""	"1109.8"	""	"1248.9"	"1235.6"	""	"332"	"39"	"32.000"	"25.000"	"0.00223927838510215"	""	"0.0007076"	"0.006782"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGVEIAK"	"[R].gLGVEIAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"622.90332"	"1244.79936"	"1244.79784"	"1.22"	"0.00076"	"12/56"	"12"	"56"	"11499858.3936157"	"HCD"	"MS2"	"12.31666"	"794.3"	"100.000"	"41.1392"	"11285"	"11285"	"11261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1231.4"	""	"1194.1"	""	"1199.6"	""	"1185.3"	""	"1341.5"	"1366.2"	""	"295"	"39"	"31.000"	"24.000"	"0.00200351233371605"	""	"0.0002277"	"0.001192"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAFSCDK"	"[R].aAFScDk.[V]"	"N-Term(TMT6plex); C5(Methylthio); K7(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.32196"	"1245.63664"	"1245.63719"	"-0.44"	"-0.00027"	"12/52"	"12"	"52"	"6251092.06689453"	"HCD"	"MS2"	"5.690332"	"590.4"	"100.000"	"40.2469"	"10875"	"10875"	"10853"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"806.5"	""	"706.4"	""	"706.5"	""	"878.4"	""	"1191.6"	"1322.9"	""	"486"	"38"	"33.000"	"26.000"	"0.00400503461140699"	"15"	"0.0005564"	"0.003565"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAFSCDK"	"[R].aAFScDk.[V]"	"N-Term(TMT6plex); C5(Methylthio); K7(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.32239"	"1245.63750"	"1245.63719"	"0.25"	"0.00016"	"12/52"	"12"	"52"	"6147383.02740479"	"HCD"	"MS2"	"12.2686"	"547.5"	"100.000"	"40.4046"	"10984"	"10984"	"10957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"758.5"	""	"651.1"	""	"663.4"	""	"818.0"	""	"1091.1"	"1222.4"	""	"498"	"36"	"33.000"	"26.000"	"0.00624021204004997"	"15"	"0.0006037"	"0.004991"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVSQYPF"	"[R].iYVSQYPF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.33856"	"1245.66985"	"1245.67169"	"-1.48"	"-0.00092"	"5/56"	"5"	"56"	"3752737.5302124"	"HCD"	"MS2"	"16.59275"	"80.2"	"100.000"	"70.1472"	"23035"	"23035"	"23011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.2"	""	"129.0"	""	"134.6"	""	"97.3"	"0.0"	"128.3"	"129.3"	""	"690"	"33"	"35.000"	"28.000"	"0.0181058573786172"	"15"	"0.001686"	"0.02293"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVSQYPF"	"[R].iYVSQYPF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.33881"	"1245.67034"	"1245.67169"	"-1.09"	"-0.00068"	"5/56"	"5"	"56"	"2138694.91540527"	"HCD"	"MS2"	"11.33914"	"65.2"	"100.000"	"70.3788"	"23181"	"23181"	"23162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.8"	""	"89.6"	""	"94.2"	""	"97.8"	"0.8"	"116.6"	"118.9"	""	"710"	"36"	"35.000"	"28.000"	"0.00964335940437875"	"15"	"0.00103"	"0.01124"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVSQYPF"	"[R].iYVSQYPF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.33899"	"1245.67070"	"1245.67169"	"-0.79"	"-0.00049"	"5/56"	"5"	"56"	"3151017.49456787"	"HCD"	"MS2"	"22.82227"	"62.9"	"100.000"	"70.0675"	"23054"	"23054"	"23034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.1"	""	"90.6"	""	"99.2"	""	"84.0"	"0.3"	"106.3"	"103.2"	""	"710"	"31"	"35.000"	"28.000"	"0.031349336464859"	"15"	"0.001389"	"0.01919"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVSQYPF"	"[R].iYVSQYPF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"623.33954"	"1245.67180"	"1245.67169"	"0.09"	"0.00005"	"5/56"	"5"	"56"	"1847023.58428955"	"HCD"	"MS2"	"9.343686"	"55.5"	"100.000"	"70.4495"	"23158"	"23158"	"23139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.1"	""	"71.1"	""	"88.4"	""	"87.5"	"0.8"	"96.4"	"98.0"	""	"701"	"30"	"35.000"	"28.000"	"0.0361150335214786"	"19"	"0.0008731"	"0.009261"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLLDK"	"[K].aLDLLDk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"623.39429"	"1245.78130"	"1245.78186"	"-0.45"	"-0.00028"	"12/54"	"12"	"54"	"8368704.49749756"	"HCD"	"MS2"	"20.11716"	"588.3"	"100.000"	"52.7476"	"16011"	"16011"	"15990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"892.2"	""	"827.6"	""	"854.2"	""	"929.4"	""	"1022.2"	"1047.4"	""	"512"	"36"	"34.000"	"27.000"	"0.00693809057764055"	"25"	"0.000523"	"0.00304"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLLDK"	"[K].aLDLLDk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"623.39435"	"1245.78142"	"1245.78186"	"-0.35"	"-0.00022"	"12/54"	"12"	"54"	"8954150.88909912"	"HCD"	"MS2"	"12.35619"	"659.8"	"100.000"	"52.5883"	"15896"	"15896"	"15874"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"948.7"	""	"930.4"	""	"979.2"	""	"1014.3"	""	"1181.2"	"1195.5"	""	"506"	"33"	"34.000"	"27.000"	"0.013369664869912"	"22"	"0.0005564"	"0.003431"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVSQVK"	"[R].gGIVSQVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"623.39874"	"1245.79021"	"1245.79309"	"-2.32"	"-0.00144"	"7/60"	"7"	"60"	"5812859.17047119"	"HCD"	"MS2"	"0"	"471.6"	"100.000"	"33.1982"	"7998"	"7998"	"7984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"760.0"	""	"754.7"	""	"733.0"	""	"605.3"	""	"808.7"	"805.0"	""	"373"	"45"	"32.000"	"25.000"	"0.000661726970920619"	""	"0.0002277"	"0.001217"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVSQVK"	"[R].gGIVSQVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"623.39886"	"1245.79045"	"1245.79309"	"-2.12"	"-0.00132"	"7/60"	"7"	"60"	"3847411.7868042"	"HCD"	"MS2"	"100"	"336.0"	"100.000"	"33.2913"	"8077"	"8077"	"8063"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"510.2"	""	"642.8"	""	"500.9"	""	"447.6"	""	"542.3"	"535.1"	""	"373"	"33"	"32.000"	"25.000"	"0.010367614398093"	"22"	"0.0001889"	"0.0006872"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAVSALAK"	"[R].aGAVSALAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"623.39960"	"1245.79192"	"1245.79309"	"-0.94"	"-0.00059"	"8/64"	"8"	"64"	"7344268.98071289"	"HCD"	"MS2"	"21.00376"	"524.7"	"100.000"	"35.4989"	"8930"	"8930"	"8907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"755.6"	""	"688.4"	""	"760.2"	""	"869.3"	"0.5"	"941.6"	"953.6"	""	"365"	"60"	"32.000"	"25.000"	"1.63028250781326E-05"	""	"0.0001859"	"0.000355"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAVSALAK"	"[R].aGAVSALAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"623.39984"	"1245.79241"	"1245.79309"	"-0.55"	"-0.00034"	"8/64"	"8"	"64"	"8030864.68048096"	"HCD"	"MS2"	"25.10221"	"564.1"	"100.000"	"35.5451"	"8992"	"8992"	"8970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"832.3"	""	"768.0"	""	"808.7"	""	"908.8"	""	"993.9"	"1030.8"	""	"365"	"53"	"32.000"	"25.000"	"8.6748678734562E-05"	""	"0.0001308"	"0.0002705"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVIFAK"	"[K].lPVIFAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"415.94846"	"1245.83081"	"1245.83350"	"-2.16"	"-0.00090"	"5/50"	"5"	"50"	"2755840.87780762"	"HCD"	"MS2"	"5.808207"	"127.4"	"100.000"	"60.6687"	"19173"	"19173"	"19145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.9"	""	"193.1"	""	"178.6"	""	"190.8"	""	"263.7"	"216.7"	""	"120"	"24"	"27.000"	"20.000"	"0.0247258511458398"	""	"0.001783"	"0.02479"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVIFAK"	"[K].lPVIFAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"415.94879"	"1245.83182"	"1245.83350"	"-1.35"	"-0.00056"	"6/50"	"6"	"50"	"2933738.78674316"	"HCD"	"MS2"	"18.46361"	"135.4"	"100.000"	"60.8414"	"19297"	"19297"	"19267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.8"	""	"187.5"	""	"190.2"	""	"213.9"	""	"278.6"	"246.9"	""	"120"	"19"	"27.000"	"20.000"	"0.0847522526773653"	"20"	"0.001846"	"0.02655"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVIFAK"	"[K].lPVIFAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"623.41968"	"1245.83208"	"1245.83350"	"-1.14"	"-0.00071"	"10/50"	"10"	"50"	"2842040.13604736"	"HCD"	"MS2"	"16.53942"	"150.6"	"100.000"	"61.2931"	"19481"	"19481"	"19459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.2"	""	"216.3"	""	"207.6"	""	"257.1"	""	"268.9"	"289.2"	""	"120"	"16"	"27.000"	"20.000"	"0.136505845846324"	"16"	"0.0006037"	"0.004725"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVALFPK"	"[R].iVALFPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"3"	"3"	"0.3462"	"0.0000"	"1"	"1"	"1"	"415.94894"	"1245.83228"	"1245.83350"	"-0.98"	"-0.00041"	"5/50"	"5"	"50"	"2118649.92877197"	"HCD"	"MS2"	"35.58279"	"93.8"	"100.000"	"59.5332"	"18762"	"18762"	"18741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.0"	""	"156.7"	""	"127.5"	""	"148.1"	"1.4"	"157.2"	"155.9"	""	"120"	"26"	"27.000"	"20.000"	"0.0149675683616577"	""	"0.001217"	"0.01827"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVIFAK"	"[K].lPVIFAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"623.41998"	"1245.83269"	"1245.83350"	"-0.65"	"-0.00041"	"5/50"	"5"	"50"	"12445632.713562"	"HCD"	"MS2"	"20.20113"	"590.2"	"100.000"	"60.4937"	"19101"	"19101"	"19081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"829.5"	""	"930.0"	""	"846.3"	""	"954.6"	"2.0"	"1014.1"	"1008.8"	""	"120"	"31"	"27.000"	"20.000"	"0.00514222707138222"	""	"0.001158"	"0.01541"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVIFAK"	"[K].lPVIFAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"623.42004"	"1245.83281"	"1245.83350"	"-0.55"	"-0.00035"	"5/50"	"5"	"50"	"54799140.1958008"	"HCD"	"MS2"	"0.3842449"	"359.0"	"13.331"	"60.9661"	"19348"	"19348"	"19331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"462.6"	""	"511.7"	""	"528.6"	""	"552.6"	""	"647.1"	"702.8"	""	"120"	"29"	"27.000"	"20.000"	"0.00847522526773653"	"20"	"0.004346"	"0.115"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFILLPK"	"[K].gFILLPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"3"	"3"	"0.0769"	"0.0000"	"1"	"1"	"1"	"415.94919"	"1245.83301"	"1245.83350"	"-0.39"	"-0.00016"	"6/50"	"6"	"50"	"2003460.08789063"	"HCD"	"MS2"	"8.939374"	"96.9"	"100.000"	"59.4617"	"18680"	"18680"	"18649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.6"	""	"154.0"	""	"130.7"	""	"161.4"	""	"173.6"	"163.4"	""	"120"	"13"	"27.000"	"20.000"	"0.335854560897066"	"13"	"0.003013"	"0.05805"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVIFAK"	"[K].lPVIFAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"623.42017"	"1245.83306"	"1245.83350"	"-0.36"	"-0.00022"	"6/50"	"6"	"50"	"3020071.30548096"	"HCD"	"MS2"	"15.7645"	"159.8"	"100.000"	"61.1272"	"19360"	"19360"	"19337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.0"	""	"213.8"	""	"224.7"	""	"247.9"	"0.2"	"314.7"	"305.4"	""	"120"	"22"	"27.000"	"20.000"	"0.0354936980505284"	"17"	"0.0005564"	"0.003396"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFILLPK"	"[K].gFILLPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"623.42029"	"1245.83330"	"1245.83350"	"-0.16"	"-0.00010"	"10/50"	"10"	"50"	"7402011.83959961"	"HCD"	"MS2"	"26.85109"	"392.4"	"100.000"	"59.6851"	"18824"	"18824"	"18805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"562.6"	""	"511.7"	""	"562.3"	""	"666.1"	"2.2"	"704.7"	"706.3"	""	"120"	"26"	"27.000"	"20.000"	"0.0135878658455584"	"16"	"0.001058"	"0.01437"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVIFAK"	"[K].lPVIFAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"623.42084"	"1245.83440"	"1245.83350"	"0.72"	"0.00045"	"5/50"	"5"	"50"	"14290885.2057495"	"HCD"	"MS2"	"6.999828"	"709.1"	"100.000"	"60.6523"	"19220"	"19220"	"19203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1006.2"	""	"1096.5"	""	"1011.7"	""	"1110.3"	"0.8"	"1232.2"	"1254.8"	""	"116"	"28"	"27.000"	"20.000"	"0.00836426903884424"	"20"	"0.001058"	"0.0143"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVIFAK"	"[K].lPVIFAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"623.42133"	"1245.83537"	"1245.83350"	"1.50"	"0.00094"	"5/50"	"5"	"50"	"57884605.2727051"	"HCD"	"MS2"	"0.428283"	"484.9"	"16.779"	"60.7979"	"19226"	"19226"	"19209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"622.5"	""	"692.1"	""	"740.5"	""	"719.4"	""	"890.8"	"930.7"	""	"116"	"31"	"27.000"	"20.000"	"0.00482422987239549"	""	"0.003507"	"0.08185"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTSLLK"	"[R].lLTSLLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"623.43048"	"1245.85369"	"1245.85463"	"-0.76"	"-0.00047"	"6/50"	"6"	"50"	"5705592.690979"	"HCD"	"MS2"	"8.276907"	"369.7"	"100.000"	"64.4236"	"20759"	"20759"	"20739"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"511.6"	""	"481.0"	""	"553.6"	""	"656.1"	"0.6"	"620.5"	"676.1"	""	"113"	"33"	"27.000"	"20.000"	"0.00279929357804707"	""	"0.001058"	"0.01324"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTSLLK"	"[R].lLTSLLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"623.43073"	"1245.85417"	"1245.85463"	"-0.37"	"-0.00023"	"6/50"	"6"	"50"	"5042794.56896973"	"HCD"	"MS2"	"0"	"341.9"	"100.000"	"64.3721"	"20685"	"20685"	"20665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"474.2"	""	"452.0"	""	"492.9"	""	"568.0"	""	"618.5"	"636.0"	""	"113"	"33"	"27.000"	"20.000"	"0.0028057466161944"	""	"0.0009727"	"0.01041"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SIHTLFGDK"	"[K].SIHTLFGDk.[L]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"416.23801"	"1246.69947"	"1246.69930"	"0.13"	"0.00005"	"4/78"	"4"	"78"	"12030420.1691895"	"HCD"	"MS2"	"37.51148"	"282.9"	"55.763"	"35.3085"	"8852"	"8852"	"8827"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.6"	""	"452.4"	""	"358.8"	""	"409.2"	""	"463.5"	"665.8"	""	"917"	"10"	"36.000"	"29.000"	"4.5220914416191"	"18"	"0.003197"	"0.06645"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATMLEALR"	"[K].lATMLEALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"623.87140"	"1246.73552"	"1246.73906"	"-2.84"	"-0.00177"	"6/70"	"6"	"70"	"1557552.02416992"	"HCD"	"MS2"	"0"	"87.3"	"100.000"	"67.3442"	"21943"	"21943"	"21925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.1"	""	"123.8"	""	"112.7"	""	"127.8"	""	"169.8"	"181.2"	""	"728"	"39"	"35.000"	"28.000"	"0.00461425279172256"	"22"	"0.0002277"	"0.001346"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATMLEALR"	"[K].lATMLEALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"623.87201"	"1246.73674"	"1246.73906"	"-1.86"	"-0.00116"	"6/70"	"6"	"70"	"1326070.48431396"	"HCD"	"MS2"	"0"	"80.3"	"100.000"	"67.4506"	"21936"	"21936"	"21918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.0"	""	"112.3"	""	"109.7"	""	"114.9"	""	"166.2"	"162.1"	""	"742"	"38"	"35.000"	"28.000"	"0.00592071163624828"	"22"	"0.0001889"	"0.0005236"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATMLEALR"	"[K].lATMLEALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"623.87213"	"1246.73699"	"1246.73906"	"-1.66"	"-0.00104"	"7/70"	"7"	"70"	"5766755.82641602"	"HCD"	"MS2"	"15.18064"	"295.6"	"100.000"	"67.0578"	"21834"	"21834"	"21827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"364.3"	""	"405.2"	""	"384.6"	""	"409.8"	""	"609.0"	"640.1"	""	"742"	"40"	"35.000"	"28.000"	"0.003321803280189"	"23"	"0.0001889"	"0.0005297"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATMLEALR"	"[K].lATMLEALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"623.87231"	"1246.73735"	"1246.73906"	"-1.37"	"-0.00085"	"7/70"	"7"	"70"	"6413312.99090576"	"HCD"	"MS2"	"19.71834"	"307.8"	"100.000"	"67.1574"	"21822"	"21822"	"21810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.4"	""	"434.0"	""	"398.9"	""	"408.7"	""	"664.2"	"664.7"	""	"742"	"44"	"35.000"	"28.000"	"0.001353237143094"	"24"	"0.0001859"	"0.0003686"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IITQGEK"	"[R].iITQGEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"623.89148"	"1246.77568"	"1246.77711"	"-1.14"	"-0.00071"	"9/60"	"9"	"60"	"2380231.36700439"	"HCD"	"MS2"	"9.099036"	"206.2"	"100.000"	"32.7070"	"7840"	"7840"	"7814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"300.7"	""	"273.5"	""	"294.8"	""	"327.2"	"1.0"	"375.7"	"380.2"	""	"519"	"18"	"34.000"	"27.000"	"0.371652759861484"	"27"	"0.0006037"	"0.004716"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IITQGEK"	"[R].iITQGEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"623.89160"	"1246.77593"	"1246.77711"	"-0.95"	"-0.00059"	"10/60"	"10"	"60"	"2798158.1003418"	"HCD"	"MS2"	"9.757858"	"250.3"	"100.000"	"32.5771"	"7744"	"7744"	"7720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.2"	""	"319.9"	""	"355.1"	""	"399.0"	"1.2"	"453.8"	"482.5"	""	"519"	"23"	"34.000"	"27.000"	"0.141624164953185"	"24"	"0.0005564"	"0.003491"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSVALAK"	"[K].vTSVALAk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4QQW8"	"Putative phospholipase B-like 2 OS=Rattus norvegicus OX=10116 GN=Plbd2 PE=1 SV=2"	"Q4QQW8"	"Putative phospholipase B-like 2 OS=Rattus norvegicus OX=10116 GN=Plbd2 PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"623.90991"	"1246.81255"	"1246.81349"	"-0.76"	"-0.00047"	"11/58"	"11"	"58"	"5339708.55725098"	"HCD"	"MS2"	"8.969347"	"418.1"	"100.000"	"38.1487"	"10061"	"10061"	"10033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"645.5"	""	"592.1"	""	"609.1"	""	"652.5"	"3.0"	"725.5"	"729.1"	""	"222"	"29"	"30.000"	"23.000"	"0.0139740720709153"	"18"	"0.0001889"	"0.001013"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLVQTK"	"[K].sLLVQTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"623.91022"	"1246.81316"	"1246.81349"	"-0.27"	"-0.00017"	"12/62"	"12"	"62"	"15885916.9261475"	"HCD"	"MS2"	"11.05966"	"1091.1"	"100.000"	"37.5204"	"9803"	"9803"	"9777"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1426.0"	""	"1399.9"	""	"1479.4"	""	"1926.4"	"5.3"	"2105.3"	"2001.6"	""	"219"	"37"	"30.000"	"23.000"	"0.00227203030161313"	""	"0.0008731"	"0.008461"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLVQTK"	"[K].sLLVQTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"623.91034"	"1246.81340"	"1246.81349"	"-0.07"	"-0.00005"	"12/62"	"12"	"62"	"17552716.2539673"	"HCD"	"MS2"	"6.494228"	"1181.7"	"100.000"	"37.4363"	"9725"	"9725"	"9704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1529.7"	""	"1530.7"	""	"1640.8"	""	"2039.5"	"8.0"	"2278.4"	"2176.6"	""	"153"	"37"	"28.000"	"21.000"	"0.001605689010972"	""	"0.00103"	"0.0126"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFPAATSGR"	"[R].lVFPAATSGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"624.36768"	"1247.72807"	"1247.73094"	"-2.29"	"-0.00143"	"9/74"	"9"	"74"	"9657403.28149414"	"HCD"	"MS2"	"0"	"438.2"	"100.000"	"41.9209"	"11560"	"11560"	"11544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.3"	""	"423.6"	""	"369.4"	""	"832.4"	"0.2"	"1076.6"	"1112.4"	""	"893"	"40"	"36.000"	"29.000"	"0.00427387152833148"	"17"	"0"	"0.000159"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFPAATSGR"	"[R].lVFPAATSGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"624.36829"	"1247.72930"	"1247.73094"	"-1.32"	"-0.00082"	"9/74"	"9"	"74"	"8556203.73223877"	"HCD"	"MS2"	"0"	"467.3"	"100.000"	"42.1274"	"11689"	"11689"	"11673"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"455.1"	""	"515.8"	""	"427.9"	""	"853.7"	""	"1063.5"	"1139.2"	""	"892"	"30"	"36.000"	"29.000"	"0.048902927547986"	"19"	"0.0001889"	"0.0004287"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFPAATSGR"	"[R].lVFPAATSGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"624.36853"	"1247.72978"	"1247.73094"	"-0.92"	"-0.00058"	"6/74"	"6"	"74"	"7335842.70727539"	"HCD"	"MS2"	"0"	"343.5"	"84.415"	"42.4417"	"11815"	"11815"	"11795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"351.7"	""	"416.8"	""	"374.0"	""	"532.6"	"2.3"	"806.5"	"786.2"	""	"812"	"29"	"36.000"	"29.000"	"0.0505272932379182"	"19"	"0"	"0.0001435"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFPAATSGR"	"[R].lVFPAATSGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"624.36871"	"1247.73015"	"1247.73094"	"-0.63"	"-0.00039"	"9/74"	"9"	"74"	"7862633.74847412"	"HCD"	"MS2"	"2.993178"	"402.4"	"97.323"	"42.2142"	"11678"	"11678"	"11660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"431.8"	""	"467.7"	""	"438.6"	""	"617.3"	""	"926.6"	"954.3"	""	"812"	"30"	"36.000"	"29.000"	"0.0402277769626464"	"17"	"0.0001308"	"0.0002054"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHPFHVIR"	"[R].lHPFHVIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.38147"	"1247.75566"	"1247.75743"	"-1.41"	"-0.00088"	"5/58"	"5"	"58"	"1138398.17303467"	"HCD"	"MS2"	"0"	"67.4"	"100.000"	"29.8676"	"6678"	"6678"	"6650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.4"	""	"100.7"	""	"98.1"	""	"111.8"	""	"103.1"	"115.8"	""	"654"	"16"	"35.000"	"28.000"	"0.745671857544136"	"14"	"0.0001889"	"0.0005826"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHPFHVIR"	"[R].lHPFHVIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"416.59033"	"1247.75644"	"1247.75743"	"-0.79"	"-0.00033"	"7/58"	"7"	"58"	"12507154.6089478"	"HCD"	"MS2"	"25.02248"	"348.5"	"79.818"	"29.8474"	"6669"	"6669"	"6650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"586.0"	""	"609.2"	""	"609.9"	""	"513.2"	""	"488.6"	"480.5"	""	"605"	"17"	"34.000"	"27.000"	"0.568493337082988"	"14"	"0.0003146"	"0.001476"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHPFHVIR"	"[R].lHPFHVIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"416.59036"	"1247.75653"	"1247.75743"	"-0.72"	"-0.00030"	"6/58"	"6"	"58"	"14707183.7705078"	"HCD"	"MS2"	"23.3992"	"442.2"	"100.000"	"29.7892"	"6604"	"6604"	"6586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"714.7"	""	"801.1"	""	"781.9"	""	"633.6"	""	"637.1"	"603.9"	""	"605"	"17"	"34.000"	"27.000"	"0.589827991426808"	"14"	"0.0003146"	"0.00147"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHPFHVIR"	"[R].lHPFHVIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.38196"	"1247.75664"	"1247.75743"	"-0.63"	"-0.00039"	"5/58"	"5"	"58"	"1146120.78387451"	"HCD"	"MS2"	"0"	"69.0"	"100.000"	"29.8075"	"6612"	"6612"	"6586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.2"	""	"107.8"	""	"111.7"	""	"105.2"	"0.1"	"109.8"	"110.4"	""	"605"	"16"	"34.000"	"27.000"	"0.699399599028117"	"14"	"0.0001889"	"0.0008454"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFGGPGAR"	"[K].kFGGPGAR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.38336"	"1247.75945"	"1247.76246"	"-2.42"	"-0.00151"	"6/72"	"6"	"72"	"2516514.53564453"	"HCD"	"MS2"	"0"	"141.5"	"100.000"	"25.2750"	"4812"	"4812"	"4784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.8"	""	"257.4"	""	"280.5"	""	"186.6"	""	"215.9"	"173.2"	""	"602"	"10"	"34.000"	"27.000"	"3.1518569296332"	"13"	"0.002165"	"0.03256"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFGGPGAR"	"[K].kFGGPGAR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"416.59161"	"1247.76029"	"1247.76246"	"-1.74"	"-0.00072"	"11/72"	"11"	"72"	"22686680.1467285"	"HCD"	"MS2"	"29.3343"	"864.5"	"42.650"	"25.3405"	"4873"	"4873"	"4855"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1370.2"	""	"1465.9"	""	"1558.3"	""	"1194.1"	""	"1388.7"	"1194.4"	""	"600"	"5"	"34.000"	"27.000"	"10.4983550108507"	"13"	"0.0003839"	"0.001953"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNSILAFR"	"[K].vVNSILAFR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"624.38733"	"1247.76738"	"1247.76732"	"0.05"	"0.00003"	"7/76"	"7"	"76"	"6433230.26721191"	"HCD"	"MS2"	"13.31203"	"311.0"	"100.000"	"57.4843"	"17930"	"17930"	"17909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"435.3"	""	"417.1"	""	"449.4"	""	"532.4"	""	"559.1"	"555.9"	""	"484"	"40"	"33.000"	"26.000"	"0.0022377695809305"	"16"	"0.0001889"	"0.0005819"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNSILAFR"	"[K].vVNSILAFR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"624.38794"	"1247.76860"	"1247.76732"	"1.03"	"0.00064"	"7/76"	"7"	"76"	"5321996.53094482"	"HCD"	"MS2"	"29.24119"	"260.5"	"100.000"	"57.2530"	"17782"	"17782"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.0"	""	"373.2"	""	"389.3"	""	"443.3"	""	"444.7"	"462.8"	""	"492"	"40"	"33.000"	"26.000"	"0.0022958055799606"	"16"	"0.0001889"	"0.0004211"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQSSLGGK"	"[K].iQSSLGGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"624.38947"	"1247.77165"	"1247.77236"	"-0.56"	"-0.00035"	"7/70"	"7"	"70"	"3492304.56396484"	"HCD"	"MS2"	"13.54096"	"264.5"	"100.000"	"33.5615"	"8140"	"8140"	"8125"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"473.4"	""	"345.6"	""	"391.5"	""	"390.1"	"1.5"	"427.8"	"470.8"	""	"473"	"35"	"33.000"	"26.000"	"0.008162649435293"	""	"0.0001889"	"0.0006312"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTNNLK"	"[K].tVTNNLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"624.38953"	"1247.77178"	"1247.77236"	"-0.47"	"-0.00029"	"12/58"	"12"	"58"	"3291337.28668213"	"HCD"	"MS2"	"0"	"256.6"	"100.000"	"30.0648"	"6759"	"6759"	"6729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"296.5"	""	"323.3"	""	"329.7"	""	"444.6"	""	"490.5"	"552.5"	""	"473"	"38"	"33.000"	"26.000"	"0.00397952415443165"	""	"0.0003839"	"0.00185"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTNNLK"	"[K].tVTNNLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"624.38971"	"1247.77214"	"1247.77236"	"-0.17"	"-0.00011"	"6/58"	"6"	"58"	"2984496.92858887"	"HCD"	"MS2"	"0"	"248.3"	"100.000"	"30.0002"	"6691"	"6691"	"6666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.8"	""	"310.3"	""	"333.3"	""	"439.1"	""	"466.1"	"543.0"	""	"436"	"34"	"33.000"	"26.000"	"0.00861899231748518"	""	"0.0003839"	"0.001847"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQSSLGGK"	"[K].iQSSLGGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"624.38971"	"1247.77214"	"1247.77236"	"-0.17"	"-0.00011"	"7/70"	"7"	"70"	"4320982.28570557"	"HCD"	"MS2"	"0"	"326.5"	"100.000"	"33.6648"	"8225"	"8225"	"8210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"573.4"	""	"413.7"	""	"466.6"	""	"497.5"	""	"570.3"	"568.9"	""	"436"	"34"	"33.000"	"26.000"	"0.00964842651750526"	"26"	"0.0001889"	"0.0006213"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDTTLK"	"[K].vLDTTLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"624.40167"	"1247.79607"	"1247.79751"	"-1.16"	"-0.00072"	"12/52"	"12"	"52"	"29131391.4454346"	"HCD"	"MS2"	"13.50655"	"1125.6"	"54.956"	"41.0618"	"11209"	"11209"	"11189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1800.2"	""	"1509.9"	""	"1559.9"	""	"2085.5"	""	"1799.8"	"1892.2"	""	"303"	"33"	"31.000"	"24.000"	"0.00708618739050106"	""	"0.001999"	"0.03116"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILSELK"	"[K].sILSELk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"624.40179"	"1247.79631"	"1247.79751"	"-0.96"	"-0.00060"	"6/56"	"6"	"56"	"6015964.46429443"	"HCD"	"MS2"	"5.61256"	"437.9"	"100.000"	"49.6242"	"14737"	"14737"	"14718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"679.2"	""	"585.4"	""	"635.7"	""	"690.5"	""	"764.6"	"795.6"	""	"300"	"34"	"31.000"	"24.000"	"0.00666946901203663"	""	"0.0006037"	"0.004835"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDTTLK"	"[K].vLDTTLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"624.40228"	"1247.79729"	"1247.79751"	"-0.18"	"-0.00011"	"12/52"	"12"	"52"	"33555154.3336182"	"HCD"	"MS2"	"12.40068"	"1017.6"	"44.553"	"41.2448"	"11328"	"11328"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1655.7"	""	"1383.2"	""	"1344.2"	""	"1937.2"	""	"1594.7"	"1710.3"	""	"252"	"33"	"31.000"	"24.000"	"0.00585289246780665"	""	"0.001686"	"0.02275"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILSELK"	"[K].sILSELk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"624.40240"	"1247.79753"	"1247.79751"	"0.02"	"0.00001"	"6/56"	"6"	"56"	"6657852.74047852"	"HCD"	"MS2"	"11.65228"	"499.6"	"100.000"	"49.3903"	"14598"	"14598"	"14575"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"723.4"	""	"677.0"	""	"719.5"	""	"773.7"	"1.1"	"902.7"	"934.8"	""	"226"	"32"	"30.000"	"23.000"	"0.00769269375323928"	""	"0.0006037"	"0.004051"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLAVVK"	"[K].lmLAVVk.[C]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.41248"	"1247.81767"	"1247.81614"	"1.23"	"0.00077"	"5/50"	"5"	"50"	"7727141.38262939"	"HCD"	"MS2"	"40.30361"	"431.5"	"100.000"	"46.9435"	"13645"	"13645"	"13618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"434.0"	""	"478.1"	""	"511.6"	""	"1006.8"	""	"872.9"	"797.1"	""	"134"	"19"	"28.000"	"21.000"	"0.0820492853507583"	"14"	"0.004819"	"0.1431"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLAVVK"	"[K].lmLAVVk.[C]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.41278"	"1247.81828"	"1247.81614"	"1.72"	"0.00107"	"5/50"	"5"	"50"	"8553883.80334473"	"HCD"	"MS2"	"31.80656"	"455.5"	"100.000"	"46.7416"	"13514"	"13514"	"13496"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"453.6"	""	"491.2"	""	"545.4"	""	"1072.9"	""	"906.0"	"859.0"	""	"134"	"18"	"28.000"	"21.000"	"0.0959565892513274"	"14"	"0.00274"	"0.0443"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFGLLVK"	"[K].lFGLLVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"624.42761"	"1247.84795"	"1247.84915"	"-0.96"	"-0.00060"	"6/50"	"6"	"50"	"1525194.3024292"	"HCD"	"MS2"	"21.59902"	"109.3"	"100.000"	"70.9483"	"23414"	"23414"	"23386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.0"	""	"137.3"	""	"170.6"	""	"209.5"	"0.5"	"189.0"	"190.1"	""	"21"	"34"	"20.000"	"13.000"	"0.000439733243373814"	""	"0.0003839"	"0.00195"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFGLLVK"	"[K].lFGLLVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"624.42871"	"1247.85015"	"1247.84915"	"0.80"	"0.00050"	"6/50"	"6"	"50"	"1880800.14825439"	"HCD"	"MS2"	"4.059496"	"145.5"	"100.000"	"70.9567"	"23365"	"23365"	"23347"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.1"	""	"188.0"	""	"220.1"	""	"265.2"	""	"247.4"	"257.3"	""	"21"	"32"	"20.000"	"13.000"	"0.00061544507273973"	""	"0.0008731"	"0.009458"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILFGEALGSL"	"[K].iLFGEALGSL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZAW2"	"Phosphatidylserine decarboxylase proenzyme, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pisd PE=1 SV=3"	"D3ZAW2"	"Phosphatidylserine decarboxylase proenzyme, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pisd PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"624.86469"	"1248.72209"	"1248.74011"	"-14.42"	"-0.00901"	"4/82"	"4"	"82"	"146699.566589355"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"92.4023"	"31903"	"31903"	"31900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.7"	""	"4.8"	""	"7.3"	""	"12.2"	""	"5.7"	"10.9"	""	"723"	"16"	"35.000"	"28.000"	"0.977480948625348"	"21"	"0.00958"	"0.4344"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFKAWAVAR"	"[R].aFKAWAVAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"416.91803"	"1248.73954"	"1248.74144"	"-1.53"	"-0.00064"	"7/78"	"7"	"78"	"7400368.23535156"	"HCD"	"MS2"	"47.65331"	"344.7"	"100.000"	"34.8478"	"8706"	"8706"	"8682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"512.9"	""	"590.1"	""	"584.4"	""	"491.0"	""	"571.4"	"510.8"	""	"766"	"11"	"35.000"	"28.000"	"2.73022710538457"	"16"	"0.001058"	"0.01449"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFKAWAVAR"	"[R].aFKAWAVAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"416.91809"	"1248.73972"	"1248.74144"	"-1.38"	"-0.00057"	"7/78"	"7"	"78"	"8030259.20715332"	"HCD"	"MS2"	"56.99961"	"374.4"	"100.000"	"34.7653"	"8629"	"8629"	"8606"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"588.0"	""	"647.7"	""	"645.7"	""	"552.0"	""	"573.2"	"529.1"	""	"766"	"12"	"35.000"	"28.000"	"2.20901555479232"	"24"	"0.0005564"	"0.003635"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFYLFPGN"	"[R].yFYLFPGN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920D5"	"Caspase-12 OS=Rattus norvegicus OX=10116 GN=Casp12 PE=1 SV=1"	"Q920D5"	"Caspase-12 OS=Rattus norvegicus OX=10116 GN=Casp12 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.32568"	"1249.64409"	"1249.64548"	"-1.11"	"-0.00069"	"5/58"	"5"	"58"	"642193.742614746"	"HCD"	"MS2"	"45.95878"	"25.1"	"100.000"	"82.4991"	"28115"	"28115"	"28094"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.3"	""	"35.7"	""	"38.3"	""	"41.6"	""	"43.3"	"49.0"	""	"711"	"14"	"35.000"	"28.000"	"1.51998606026889"	"14"	"0.001587"	"0.02125"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFYLFPGN"	"[R].yFYLFPGN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920D5"	"Caspase-12 OS=Rattus norvegicus OX=10116 GN=Casp12 PE=1 SV=1"	"Q920D5"	"Caspase-12 OS=Rattus norvegicus OX=10116 GN=Casp12 PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"625.32721"	"1249.64714"	"1249.64548"	"1.33"	"0.00083"	"4/58"	"4"	"58"	"690386.867553711"	"HCD"	"MS2"	"46.12413"	"29.2"	"100.000"	"82.4699"	"28052"	"28052"	"28032"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.6"	""	"40.3"	""	"53.3"	""	"47.0"	"0.5"	"52.9"	"49.1"	""	"681"	"18"	"35.000"	"28.000"	"0.483189086135136"	"15"	"0.001454"	"0.0199"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAFLQSDR"	"[K].iAAFLQSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"625.35840"	"1249.70952"	"1249.71020"	"-0.55"	"-0.00034"	"12/72"	"12"	"72"	"5057351.79174805"	"HCD"	"MS2"	"0"	"267.1"	"100.000"	"48.4820"	"14226"	"14226"	"14208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"426.5"	""	"327.0"	""	"382.2"	""	"435.6"	""	"455.9"	"501.1"	""	"715"	"39"	"35.000"	"28.000"	"0.00415217879447922"	""	"0.0001308"	"0.0002485"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAFLQSDR"	"[K].iAAFLQSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"0.4865"	"0.0000"	"1"	"1"	"1"	"625.35889"	"1249.71050"	"1249.71020"	"0.24"	"0.00015"	"12/72"	"12"	"72"	"4475733.68206787"	"HCD"	"MS2"	"0"	"237.8"	"100.000"	"48.6992"	"14363"	"14363"	"14335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"402.6"	""	"307.8"	""	"336.6"	""	"373.1"	""	"387.0"	"445.6"	""	"759"	"37"	"35.000"	"28.000"	"0.00679534921606394"	""	"0"	"0.0001698"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDPFSK"	"[K].vVDPFSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"625.38031"	"1249.75334"	"1249.75564"	"-1.84"	"-0.00115"	"6/54"	"6"	"54"	"9561978.37011719"	"HCD"	"MS2"	"0"	"704.4"	"100.000"	"45.6127"	"13052"	"13052"	"13035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1246.8"	""	"1130.8"	""	"1222.7"	""	"1237.6"	"3.6"	"975.5"	"822.6"	""	"552"	"21"	"34.000"	"27.000"	"0.23329696126424"	""	"0.0007076"	"0.006999"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDPFSK"	"[K].vVDPFSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"625.38068"	"1249.75408"	"1249.75564"	"-1.26"	"-0.00078"	"6/54"	"6"	"54"	"10082465.9927979"	"HCD"	"MS2"	"19.31252"	"673.9"	"94.043"	"45.8654"	"13205"	"13205"	"13190"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1167.0"	""	"1119.5"	""	"1151.6"	""	"1161.4"	""	"963.9"	"792.2"	""	"548"	"20"	"34.000"	"27.000"	"0.260465713461821"	""	"0.0006737"	"0.006526"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPQLLSGIR"	"[K].hPQLLSGIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"417.25699"	"1249.75641"	"1249.75782"	"-1.13"	"-0.00047"	"5/76"	"5"	"76"	"12956886.6900024"	"HCD"	"MS2"	"20.64432"	"251.2"	"86.624"	"30.8923"	"7098"	"7098"	"7072"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.7"	""	"361.9"	""	"388.7"	""	"361.0"	""	"444.1"	"436.7"	""	"536"	"34"	"34.000"	"27.000"	"0.0111978538261295"	"19"	"0.0001889"	"0.0003756"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPQLLSGIR"	"[K].hPQLLSGIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"417.25745"	"1249.75779"	"1249.75782"	"-0.03"	"-0.00001"	"5/76"	"5"	"76"	"12052895.2589722"	"HCD"	"MS2"	"33.22687"	"300.9"	"100.000"	"30.7822"	"7012"	"7012"	"6984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"458.5"	""	"440.7"	""	"469.6"	""	"436.7"	""	"531.7"	"513.4"	""	"511"	"37"	"34.000"	"27.000"	"0.00543739526248583"	"19"	"0.0001308"	"0.0003123"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFLQAGK"	"[R].qFLQAGk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"625.38586"	"1249.76445"	"1249.76688"	"-1.94"	"-0.00121"	"12/62"	"12"	"62"	"8392676.16766357"	"HCD"	"MS2"	"0"	"637.6"	"100.000"	"36.4159"	"9350"	"9350"	"9321"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"999.4"	""	"825.7"	""	"874.8"	""	"1073.4"	""	"1126.6"	"1143.6"	""	"448"	"26"	"33.000"	"26.000"	"0.0597376340852811"	"24"	"0.0006396"	"0.006278"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFLQAGK"	"[R].qFLQAGk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"625.38678"	"1249.76628"	"1249.76688"	"-0.48"	"-0.00030"	"12/62"	"12"	"62"	"8468181.22686768"	"HCD"	"MS2"	"0"	"677.0"	"100.000"	"36.3609"	"9284"	"9284"	"9258"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1001.9"	""	"885.6"	""	"886.3"	""	"1133.8"	"3.0"	"1271.7"	"1232.3"	""	"406"	"25"	"33.000"	"26.000"	"0.0623011463643405"	"25"	"0.0008731"	"0.009343"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVMLGLK"	"[R].mVMLGLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"625.39282"	"1249.77837"	"1249.77764"	"0.58"	"0.00036"	"12/50"	"12"	"50"	"1942336.11968994"	"HCD"	"MS2"	"37.55929"	"170.0"	"100.000"	"54.6128"	"16703"	"16703"	"16672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.1"	""	"251.9"	""	"274.3"	""	"229.9"	""	"314.6"	"304.3"	""	"303"	"33"	"31.000"	"24.000"	"0.00789609987324198"	"18"	"0.0003839"	"0.001581"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVMLGLK"	"[R].mVMLGLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"625.39417"	"1249.78105"	"1249.77764"	"2.73"	"0.00171"	"12/50"	"12"	"50"	"1870426.5078125"	"HCD"	"MS2"	"47.05524"	"155.6"	"100.000"	"54.8421"	"16850"	"16850"	"16821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.2"	""	"219.8"	""	"245.6"	""	"214.7"	"1.9"	"295.4"	"276.5"	""	"277"	"31"	"31.000"	"24.000"	"0.00982765208629294"	"18"	"0.0004166"	"0.002337"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYIPISK"	"[R].aYIPISk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7C7"	"Transmembrane glycoprotein NMB OS=Rattus norvegicus OX=10116 GN=Gpnmb PE=2 SV=1"	"Q6P7C7"	"Transmembrane glycoprotein NMB OS=Rattus norvegicus OX=10116 GN=Gpnmb PE=2 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"625.39899"	"1249.79070"	"1249.79203"	"-1.07"	"-0.00067"	"4/48"	"4"	"48"	"4042143.02844238"	"HCD"	"MS2"	"45.1739"	"347.5"	"100.000"	"41.7834"	"11549"	"11549"	"11522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"454.1"	""	"411.3"	""	"454.3"	""	"580.5"	""	"681.0"	"718.7"	""	"226"	"19"	"30.000"	"23.000"	"0.155983421900126"	"17"	"0.002981"	"0.05446"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYIPISK"	"[R].aYIPISk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7C7"	"Transmembrane glycoprotein NMB OS=Rattus norvegicus OX=10116 GN=Gpnmb PE=2 SV=1"	"Q6P7C7"	"Transmembrane glycoprotein NMB OS=Rattus norvegicus OX=10116 GN=Gpnmb PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"625.39899"	"1249.79070"	"1249.79203"	"-1.07"	"-0.00067"	"4/48"	"4"	"48"	"3988852.54547119"	"HCD"	"MS2"	"44.66468"	"340.9"	"100.000"	"41.5886"	"11425"	"11425"	"11403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"443.3"	""	"395.3"	""	"404.2"	""	"603.3"	""	"665.2"	"725.2"	""	"226"	"18"	"30.000"	"23.000"	"0.172614964580902"	"18"	"0.0008731"	"0.009622"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDFAVK"	"[R].vIDFAVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"625.39899"	"1249.79070"	"1249.79203"	"-1.07"	"-0.00067"	"12/48"	"12"	"48"	"10199652.7928467"	"HCD"	"MS2"	"16.80837"	"668.6"	"100.000"	"51.5623"	"15476"	"15476"	"15458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1101.0"	""	"1034.6"	""	"1038.6"	""	"1023.2"	""	"1073.5"	"1047.9"	""	"226"	"34"	"30.000"	"23.000"	"0.00411223990823744"	""	"0.0008731"	"0.008415"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYIPISK"	"[R].aYIPISk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7C7"	"Transmembrane glycoprotein NMB OS=Rattus norvegicus OX=10116 GN=Gpnmb PE=2 SV=1"	"Q6P7C7"	"Transmembrane glycoprotein NMB OS=Rattus norvegicus OX=10116 GN=Gpnmb PE=2 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"625.39917"	"1249.79106"	"1249.79203"	"-0.77"	"-0.00048"	"6/48"	"6"	"48"	"11437215.6646729"	"HCD"	"MS2"	"30.1313"	"609.6"	"77.534"	"41.2700"	"11295"	"11295"	"11269"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"880.5"	""	"797.6"	""	"902.0"	""	"975.7"	""	"1114.5"	"1106.4"	""	"226"	"33"	"30.000"	"23.000"	"0.00565039024523986"	"19"	"0.0009727"	"0.01065"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDFAVK"	"[R].vIDFAVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"625.39917"	"1249.79106"	"1249.79203"	"-0.77"	"-0.00048"	"12/48"	"12"	"48"	"11118936.6978149"	"HCD"	"MS2"	"18.90268"	"710.8"	"100.000"	"51.7620"	"15608"	"15608"	"15590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1164.9"	""	"1089.4"	""	"1107.8"	""	"1081.6"	""	"1118.8"	"1156.6"	""	"226"	"36"	"30.000"	"23.000"	"0.00289120205220338"	""	"0.0008453"	"0.008241"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYIPISK"	"[R].aYIPISk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7C7"	"Transmembrane glycoprotein NMB OS=Rattus norvegicus OX=10116 GN=Gpnmb PE=2 SV=1"	"Q6P7C7"	"Transmembrane glycoprotein NMB OS=Rattus norvegicus OX=10116 GN=Gpnmb PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"625.39923"	"1249.79119"	"1249.79203"	"-0.68"	"-0.00042"	"6/48"	"6"	"48"	"11072038.083313"	"HCD"	"MS2"	"40.52777"	"675.8"	"83.869"	"41.4603"	"11417"	"11417"	"11389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"973.3"	""	"874.8"	""	"982.0"	""	"1133.7"	"2.7"	"1209.0"	"1224.7"	""	"226"	"34"	"30.000"	"23.000"	"0.00412171960025937"	"19"	"0.0009727"	"0.01032"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAILYAK"	"[R].lAILYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.41681"	"1249.82634"	"1249.82842"	"-1.66"	"-0.00104"	"6/50"	"6"	"50"	"5680344.97509766"	"HCD"	"MS2"	"46.08091"	"415.7"	"100.000"	"53.3493"	"16254"	"16254"	"16247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"603.3"	""	"588.8"	""	"619.2"	""	"610.6"	"1.6"	"742.6"	"770.9"	""	"58"	"33"	"24.000"	"17.000"	"0.00151146466220473"	"15"	"0.0008125"	"0.007694"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAILYAK"	"[R].lAILYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.41681"	"1249.82634"	"1249.82842"	"-1.66"	"-0.00104"	"10/50"	"10"	"50"	"5662101.3717041"	"HCD"	"MS2"	"43.32504"	"429.7"	"100.000"	"53.1464"	"16122"	"16122"	"16113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"639.0"	""	"581.5"	""	"633.6"	""	"650.9"	""	"759.2"	"813.8"	""	"58"	"26"	"24.000"	"17.000"	"0.00793227930628947"	"14"	"0.001966"	"0.02849"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPMTSQK"	"[K].tPMTSQk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"625.86212"	"1250.71697"	"1250.71788"	"-0.73"	"-0.00046"	"5/58"	"5"	"58"	"632992.265197754"	"HCD"	"MS2"	"0"	"55.9"	"100.000"	"26.9860"	"5505"	"5505"	"5491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.6"	""	"87.7"	""	"87.5"	""	"52.2"	""	"99.4"	"108.2"	""	"707"	"29"	"35.000"	"28.000"	"0.0458552872292829"	"21"	"0.00103"	"0.01279"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPMTSQK"	"[K].tPMTSQk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"625.86243"	"1250.71758"	"1250.71788"	"-0.24"	"-0.00015"	"6/58"	"6"	"58"	"583451.69342041"	"HCD"	"MS2"	"0"	"53.9"	"100.000"	"27.0191"	"5555"	"5555"	"5536"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.4"	""	"79.8"	""	"76.9"	""	"67.8"	"0.5"	"94.7"	"98.0"	""	"701"	"30"	"35.000"	"28.000"	"0.0321135281787761"	"25"	"0.0006037"	"0.004457"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAIWGSK"	"[K].mAIWGSk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"625.86285"	"1250.71843"	"1250.73314"	"-11.76"	"-0.00735"	"6/48"	"6"	"48"	"5209140.18206787"	"HCD"	"MS2"	"10.11199"	"459.4"	"100.000"	"45.1475"	"12866"	"12866"	"12848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"682.2"	""	"736.0"	""	"587.1"	""	"735.4"	""	"777.9"	"829.6"	""	"699"	"8"	"35.000"	"28.000"	"5.6033426404617"	"19"	"0.004377"	"0.1275"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILTEIYR"	"[K].nILTEIYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"625.86792"	"1250.72856"	"1250.73060"	"-1.63"	"-0.00102"	"6/72"	"6"	"72"	"6069561.57263184"	"HCD"	"MS2"	"0"	"324.7"	"100.000"	"49.7789"	"14753"	"14753"	"14735"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"450.8"	""	"421.4"	""	"461.5"	""	"515.2"	""	"606.6"	"622.2"	""	"598"	"40"	"34.000"	"27.000"	"0.00310220996329585"	"19"	"0.0003571"	"0.001497"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILTEIYR"	"[K].nILTEIYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"625.86823"	"1250.72917"	"1250.73060"	"-1.14"	"-0.00071"	"6/72"	"6"	"72"	"6673597.82946777"	"HCD"	"MS2"	"0"	"389.9"	"100.000"	"50.0170"	"14897"	"14897"	"14878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"552.2"	""	"543.5"	""	"552.5"	""	"602.8"	""	"691.1"	"753.5"	""	"585"	"37"	"34.000"	"27.000"	"0.00574282880974543"	"17"	"0.0004557"	"0.002565"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSLDALSLR"	"[K].fSLDALSLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXU8"	"Cytoplasmic dynein 1 light intermediate chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1li1 PE=1 SV=1"	"Q9QXU8"	"Cytoplasmic dynein 1 light intermediate chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1li1 PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"625.86841"	"1250.72954"	"1250.73060"	"-0.85"	"-0.00053"	"7/74"	"7"	"74"	"5329897.87493896"	"HCD"	"MS2"	"35.11233"	"264.4"	"100.000"	"63.2177"	"20267"	"20267"	"20243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"403.7"	""	"363.4"	""	"385.7"	""	"446.1"	""	"443.4"	"466.7"	""	"615"	"43"	"34.000"	"27.000"	"0.00165899516423402"	"20"	"0.0001859"	"0.0003143"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSLDALSLR"	"[K].fSLDALSLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXU8"	"Cytoplasmic dynein 1 light intermediate chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1li1 PE=1 SV=1"	"Q9QXU8"	"Cytoplasmic dynein 1 light intermediate chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1li1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"625.86877"	"1250.73027"	"1250.73060"	"-0.26"	"-0.00017"	"7/74"	"7"	"74"	"5411817.12988281"	"HCD"	"MS2"	"6.750217"	"264.8"	"100.000"	"63.1546"	"20188"	"20188"	"20169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"361.9"	""	"345.5"	""	"379.4"	""	"471.5"	"0.1"	"471.5"	"478.0"	""	"609"	"39"	"34.000"	"27.000"	"0.00363569377809372"	"18"	"0.0001859"	"0.0003218"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAIWGSK"	"[K].mAIWGSk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"625.87115"	"1250.73503"	"1250.73314"	"1.52"	"0.00095"	"6/48"	"6"	"48"	"6544169.89904785"	"HCD"	"MS2"	"8.602639"	"514.7"	"100.000"	"45.5128"	"13065"	"13065"	"13035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"835.6"	""	"703.5"	""	"780.2"	""	"527.0"	""	"930.8"	"1103.1"	""	"564"	"34"	"34.000"	"27.000"	"0.0123950735553467"	"16"	"0.0006037"	"0.003896"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIQCAK"	"[R].aLIQcAk.[D]"	"N-Term(TMT6plex); C5(Methylthio); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"625.87146"	"1250.73564"	"1250.73651"	"-0.69"	"-0.00043"	"4/56"	"4"	"56"	"7239791.35638428"	"HCD"	"MS2"	"37.86691"	"518.0"	"100.000"	"44.6076"	"12695"	"12695"	"12685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"621.6"	""	"632.7"	""	"669.2"	""	"931.4"	""	"1014.2"	"1056.3"	""	"536"	"15"	"34.000"	"27.000"	"0.924985221420095"	"16"	"0.001217"	"0.0171"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIQCAK"	"[R].aLIQcAk.[D]"	"N-Term(TMT6plex); C5(Methylthio); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"625.87195"	"1250.73662"	"1250.73651"	"0.09"	"0.00006"	"12/56"	"12"	"56"	"6941800.50628662"	"HCD"	"MS2"	"27.10729"	"524.5"	"100.000"	"44.3209"	"12579"	"12579"	"12556"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"733.4"	""	"771.8"	""	"767.3"	""	"787.7"	"1.2"	"933.5"	"972.4"	""	"534"	"32"	"34.000"	"27.000"	"0.0175999430030234"	"23"	"0.0006037"	"0.005445"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIQCAK"	"[R].aLIQcAk.[D]"	"N-Term(TMT6plex); C5(Methylthio); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"625.87305"	"1250.73882"	"1250.73651"	"1.85"	"0.00116"	"12/56"	"12"	"56"	"6368532.47357178"	"HCD"	"MS2"	"19.38831"	"509.6"	"100.000"	"44.0777"	"12430"	"12430"	"12406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"721.9"	""	"773.2"	""	"732.8"	""	"774.2"	""	"913.0"	"912.8"	""	"529"	"38"	"34.000"	"27.000"	"0.0038496892681393"	"26"	"0.0006037"	"0.004046"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQIFSLK"	"[R].gQIFSLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99041"	"Protein-glutamine gamma-glutamyltransferase 4 OS=Rattus norvegicus OX=10116 GN=Tgm4 PE=1 SV=2"	"Q99041"	"Protein-glutamine gamma-glutamyltransferase 4 OS=Rattus norvegicus OX=10116 GN=Tgm4 PE=1 SV=2"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"3"	"625.89630"	"1250.78533"	"1250.78728"	"-1.56"	"-0.00098"	"5/58"	"5"	"58"	"14450004.4260864"	"HCD"	"MS2"	"0"	"1032.6"	"86.572"	"43.4201"	"12212"	"12212"	"12202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1327.7"	""	"1390.0"	""	"1390.2"	""	"1709.3"	"3.5"	"1949.9"	"2021.0"	""	"179"	"9"	"29.000"	"22.000"	"1.02052355986725"	"21"	"0.004323"	"0.1147"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVFQLK"	"[K].tGVFQLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"3"	"625.89636"	"1250.78545"	"1250.78728"	"-1.46"	"-0.00092"	"6/52"	"6"	"52"	"11759952.4233398"	"HCD"	"MS2"	"11.75135"	"466.4"	"46.104"	"43.1399"	"12049"	"12049"	"12041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"597.1"	""	"612.7"	""	"634.8"	""	"769.9"	"2.1"	"912.7"	"894.0"	""	"179"	"11"	"29.000"	"22.000"	"0.775930878803604"	"22"	"0.006061"	"0.2116"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYILQAK"	"[K].gYILQAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48508"	"Glutamate--cysteine ligase regulatory subunit OS=Rattus norvegicus OX=10116 GN=Gclm PE=1 SV=1"	"P48508"	"Glutamate--cysteine ligase regulatory subunit OS=Rattus norvegicus OX=10116 GN=Gclm PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"625.89655"	"1250.78581"	"1250.78728"	"-1.17"	"-0.00073"	"6/54"	"6"	"54"	"19121154.6953125"	"HCD"	"MS2"	"32.99363"	"580.6"	"40.778"	"38.3718"	"10109"	"10109"	"10087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"904.9"	""	"806.9"	""	"836.8"	""	"859.4"	""	"1034.2"	"1057.0"	""	"178"	"12"	"29.000"	"22.000"	"0.537514280144978"	"19"	"0.003507"	"0.08161"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQIFSLK"	"[R].gQIFSLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99041"	"Protein-glutamine gamma-glutamyltransferase 4 OS=Rattus norvegicus OX=10116 GN=Tgm4 PE=1 SV=2"	"Q99041"	"Protein-glutamine gamma-glutamyltransferase 4 OS=Rattus norvegicus OX=10116 GN=Tgm4 PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"3"	"625.89661"	"1250.78594"	"1250.78728"	"-1.07"	"-0.00067"	"4/58"	"4"	"58"	"3215654.18841553"	"HCD"	"MS2"	"0"	"294.2"	"100.000"	"43.7337"	"12339"	"12339"	"12317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"380.4"	""	"392.6"	""	"381.2"	""	"484.5"	""	"559.5"	"592.2"	""	"178"	"10"	"29.000"	"22.000"	"0.819200118860323"	"21"	"0.002829"	"0.04777"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GQIFSLK"	"[R].gQIFSLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99041"	"Protein-glutamine gamma-glutamyltransferase 4 OS=Rattus norvegicus OX=10116 GN=Tgm4 PE=1 SV=2"	"Q99041"	"Protein-glutamine gamma-glutamyltransferase 4 OS=Rattus norvegicus OX=10116 GN=Tgm4 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"625.89667"	"1250.78606"	"1250.78728"	"-0.98"	"-0.00061"	"4/58"	"4"	"58"	"5199887.53338623"	"HCD"	"MS2"	"0"	"459.0"	"100.000"	"43.4425"	"12172"	"12172"	"12159"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"562.6"	""	"599.7"	""	"638.0"	""	"769.5"	""	"864.3"	"921.3"	""	"178"	"8"	"29.000"	"22.000"	"1.40731075495064"	"19"	"0.002981"	"0.05423"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYILQAK"	"[K].gYILQAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48508"	"Glutamate--cysteine ligase regulatory subunit OS=Rattus norvegicus OX=10116 GN=Gclm PE=1 SV=1"	"P48508"	"Glutamate--cysteine ligase regulatory subunit OS=Rattus norvegicus OX=10116 GN=Gclm PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"625.89697"	"1250.78667"	"1250.78728"	"-0.49"	"-0.00031"	"6/54"	"6"	"54"	"4241945.76525879"	"HCD"	"MS2"	"19.661"	"408.8"	"100.000"	"38.6823"	"10280"	"10280"	"10257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"650.9"	""	"585.2"	""	"632.5"	""	"584.8"	"0.5"	"701.2"	"711.7"	""	"178"	"14"	"29.000"	"22.000"	"0.379655771733418"	"20"	"0.001058"	"0.01437"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEMAAK"	"[K].iMEMAAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"626.36407"	"1251.72087"	"1251.72052"	"0.28"	"0.00018"	"6/48"	"6"	"48"	"14795773.7911377"	"HCD"	"MS2"	"9.30344"	"830.1"	"74.426"	"41.1644"	"11295"	"11295"	"11277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1506.0"	""	"1295.8"	""	"1298.2"	""	"712.4"	""	"1435.6"	"1607.4"	""	"567"	"28"	"34.000"	"27.000"	"0.0452431738241614"	"21"	"0.0009727"	"0.01056"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEMAAK"	"[K].iMEMAAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"626.36438"	"1251.72148"	"1251.72052"	"0.77"	"0.00048"	"6/48"	"6"	"48"	"12987330.6472168"	"HCD"	"MS2"	"10.62418"	"1066.6"	"100.000"	"40.9788"	"11175"	"11175"	"11157"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1890.2"	""	"1681.9"	""	"1668.8"	""	"930.7"	""	"1843.7"	"2085.9"	""	"581"	"30"	"34.000"	"27.000"	"0.0261906415474531"	"22"	"0.0009727"	"0.01061"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLNGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"626.37268"	"1251.73808"	"1251.74111"	"-2.42"	"-0.00151"	"5/70"	"5"	"70"	"1574480.87939453"	"HCD"	"MS2"	"0"	"91.6"	"100.000"	"67.1561"	"21870"	"21870"	"21862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.6"	""	"141.5"	""	"143.1"	""	"142.4"	""	"153.2"	"165.3"	""	"516"	"33"	"34.000"	"27.000"	"0.0120398120121086"	"17"	"0.0001859"	"0.0003734"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLNGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"626.37311"	"1251.73894"	"1251.74111"	"-1.73"	"-0.00108"	"5/70"	"5"	"70"	"1297430.90454102"	"HCD"	"MS2"	"0"	"86.9"	"100.000"	"67.2511"	"21859"	"21859"	"21843"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.6"	""	"117.7"	""	"147.0"	""	"135.1"	""	"152.5"	"144.3"	""	"498"	"30"	"33.000"	"26.000"	"0.0239441457317533"	"18"	"0.0001889"	"0.0003749"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLNGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"626.37390"	"1251.74053"	"1251.74111"	"-0.47"	"-0.00029"	"5/70"	"5"	"70"	"8509591.48413086"	"HCD"	"MS2"	"11.46303"	"380.9"	"100.000"	"66.9694"	"21746"	"21746"	"21721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"583.7"	""	"645.9"	""	"679.4"	""	"551.3"	""	"549.0"	"587.9"	""	"467"	"31"	"33.000"	"26.000"	"0.0183775191893806"	"16"	"0.0002277"	"0.001166"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLNGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"626.37396"	"1251.74065"	"1251.74111"	"-0.37"	"-0.00023"	"5/70"	"5"	"70"	"8626032.00689697"	"HCD"	"MS2"	"22.97371"	"382.1"	"100.000"	"66.8930"	"21767"	"21767"	"21747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"588.7"	""	"634.6"	""	"645.2"	""	"593.0"	""	"548.9"	"599.3"	""	"467"	"31"	"33.000"	"26.000"	"0.01812537017328"	"17"	"0.0002277"	"0.001195"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNVFQAK"	"[K].sNVFQAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2M6"	"DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Dcaf8 PE=1 SV=1"	"Q5U2M6"	"DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Dcaf8 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"626.37494"	"1251.74260"	"1251.74614"	"-2.83"	"-0.00177"	"6/58"	"6"	"58"	"2844358.27331543"	"HCD"	"MS2"	"0"	"284.9"	"100.000"	"33.6143"	"8205"	"8205"	"8186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"441.2"	""	"342.0"	""	"373.1"	""	"471.4"	""	"537.7"	"535.8"	""	"471"	"7"	"33.000"	"26.000"	"5.09320212337713"	"16"	"0.0007076"	"0.006949"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNVFQAK"	"[K].sNVFQAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2M6"	"DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Dcaf8 PE=1 SV=1"	"Q5U2M6"	"DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Dcaf8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.37549"	"1251.74370"	"1251.74614"	"-1.95"	"-0.00122"	"6/58"	"6"	"58"	"2784617.32312012"	"HCD"	"MS2"	"0"	"267.1"	"100.000"	"33.5684"	"8143"	"8143"	"8125"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"403.2"	""	"320.4"	""	"354.6"	""	"433.4"	""	"504.1"	"517.4"	""	"462"	"4"	"33.000"	"26.000"	"8.62207864508114"	"13"	"0.0007076"	"0.007144"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTVQGFK"	"[K].nTVQGFk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"626.37646"	"1251.74565"	"1251.74614"	"-0.39"	"-0.00024"	"10/60"	"10"	"60"	"2327281.19970703"	"HCD"	"MS2"	"0"	"219.1"	"100.000"	"32.2763"	"7621"	"7621"	"7592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"335.4"	""	"317.7"	""	"296.9"	""	"345.4"	""	"382.4"	"399.0"	""	"449"	"25"	"33.000"	"26.000"	"0.0755468473247976"	""	"0.000523"	"0.003181"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTVQGFK"	"[K].nTVQGFk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"626.37701"	"1251.74675"	"1251.74614"	"0.49"	"0.00030"	"10/60"	"10"	"60"	"2232376.87103271"	"HCD"	"MS2"	"0"	"204.1"	"100.000"	"32.3577"	"7697"	"7697"	"7670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"321.8"	""	"290.2"	""	"280.3"	""	"305.3"	"3.1"	"366.6"	"365.3"	""	"470"	"27"	"33.000"	"26.000"	"0.0418859010350301"	""	"0.0003839"	"0.001547"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAGLLEK"	"[K].yAGLLEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"626.38831"	"1251.76933"	"1251.77130"	"-1.57"	"-0.00098"	"6/48"	"6"	"48"	"10228636.2420654"	"HCD"	"MS2"	"23.61495"	"514.2"	"56.088"	"42.7286"	"11889"	"11889"	"11868"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"659.2"	""	"673.2"	""	"700.4"	""	"877.0"	""	"991.5"	"975.5"	""	"297"	"30"	"31.000"	"24.000"	"0.0134501291233383"	""	"0.0006737"	"0.006635"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTVYPSK"	"[K].vTVYPSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"626.38855"	"1251.76982"	"1251.77130"	"-1.18"	"-0.00074"	"6/56"	"6"	"56"	"3449063.18511963"	"HCD"	"MS2"	"7.986711"	"273.3"	"100.000"	"35.2375"	"8823"	"8823"	"8795"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"380.3"	""	"375.3"	""	"354.4"	""	"473.6"	""	"513.8"	"496.9"	""	"289"	"26"	"31.000"	"24.000"	"0.0384474771140928"	""	"0.0006037"	"0.003982"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAGLLEK"	"[K].yAGLLEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"626.38867"	"1251.77007"	"1251.77130"	"-0.98"	"-0.00061"	"6/48"	"6"	"48"	"11322691.6696777"	"HCD"	"MS2"	"36.22075"	"468.6"	"48.370"	"42.9918"	"12041"	"12041"	"12019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"625.1"	""	"595.9"	""	"616.1"	""	"808.2"	""	"883.9"	"919.9"	""	"289"	"32"	"31.000"	"24.000"	"0.00890979777689841"	""	"0.0007076"	"0.006992"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTVYPSK"	"[K].vTVYPSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"626.38885"	"1251.77043"	"1251.77130"	"-0.69"	"-0.00043"	"5/56"	"5"	"56"	"3221010.59124756"	"HCD"	"MS2"	"0"	"253.7"	"100.000"	"35.2903"	"8888"	"8888"	"8858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"339.8"	""	"371.0"	""	"354.9"	""	"420.7"	""	"471.9"	"447.8"	""	"289"	"19"	"31.000"	"24.000"	"0.188741693335051"	"24"	"0.0009092"	"0.00965"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAAYIK"	"[K].dIAAYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q78P75"	"Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1"	"Q78P75"	"Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"626.38898"	"1251.77068"	"1251.77130"	"-0.49"	"-0.00031"	"6/48"	"6"	"48"	"7505923.49859619"	"HCD"	"MS2"	"13.79723"	"591.1"	"100.000"	"47.0449"	"13686"	"13686"	"13666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"796.9"	""	"723.7"	""	"809.4"	""	"1054.2"	"1.2"	"1071.3"	"1145.3"	""	"289"	"33"	"31.000"	"24.000"	"0.00786806333357299"	"22"	"0.0006037"	"0.005913"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAAYIK"	"[K].dIAAYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q78P75"	"Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1"	"Q78P75"	"Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"417.92847"	"1251.77085"	"1251.77130"	"-0.36"	"-0.00015"	"5/48"	"5"	"48"	"2873138.91253662"	"HCD"	"MS2"	"43.50283"	"127.5"	"100.000"	"46.8867"	"13574"	"13574"	"13544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.4"	""	"160.9"	""	"169.1"	""	"211.8"	""	"244.9"	"270.0"	""	"289"	"24"	"31.000"	"24.000"	"0.0555735125055536"	"16"	"0.0005564"	"0.003536"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAAYIK"	"[K].dIAAYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q78P75"	"Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1"	"Q78P75"	"Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"417.92850"	"1251.77094"	"1251.77130"	"-0.28"	"-0.00012"	"5/48"	"5"	"48"	"2861845.18487549"	"HCD"	"MS2"	"10.93815"	"127.1"	"100.000"	"47.2034"	"13751"	"13751"	"13730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.1"	""	"152.5"	""	"176.4"	""	"228.3"	""	"238.3"	"258.2"	""	"288"	"25"	"31.000"	"24.000"	"0.0413392403811556"	"16"	"0.000494"	"0.002738"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTILGHVQR"	"[R].vTILGHVQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"417.92862"	"1251.77130"	"1251.77347"	"-1.73"	"-0.00072"	"8/66"	"8"	"66"	"6100871.15924072"	"HCD"	"MS2"	"32.90762"	"285.5"	"85.434"	"32.0163"	"7515"	"7515"	"7490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"419.9"	""	"403.9"	""	"438.4"	""	"405.4"	"0.0"	"534.6"	"501.1"	""	"275"	"15"	"31.000"	"24.000"	"0.476763169372231"	"13"	"0.0001889"	"0.0006419"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAAYIK"	"[K].dIAAYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q78P75"	"Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1"	"Q78P75"	"Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"626.38947"	"1251.77165"	"1251.77130"	"0.29"	"0.00018"	"6/48"	"6"	"48"	"11502931.8346558"	"HCD"	"MS2"	"6.326375"	"799.3"	"100.000"	"46.8199"	"13546"	"13546"	"13528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1074.8"	""	"996.5"	""	"1066.4"	""	"1397.6"	""	"1447.6"	"1599.9"	""	"273"	"32"	"31.000"	"24.000"	"0.00953087231565339"	"22"	"0.0006037"	"0.00592"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTAVVK"	"[K].yLTAVVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62737"	"Cytochrome b-245 light chain OS=Rattus norvegicus OX=10116 GN=Cyba PE=1 SV=3"	"Q62737"	"Cytochrome b-245 light chain OS=Rattus norvegicus OX=10116 GN=Cyba PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.40686"	"1251.80644"	"1251.80768"	"-0.99"	"-0.00062"	"12/48"	"12"	"48"	"3305684.47320557"	"HCD"	"MS2"	"22.16484"	"315.9"	"100.000"	"42.4765"	"11786"	"11786"	"11756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"386.9"	""	"389.5"	""	"397.2"	""	"509.5"	"1.3"	"664.6"	"650.6"	""	"100"	"35"	"26.000"	"20.000"	"0.00151694559209714"	"15"	"0.0004557"	"0.00255"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTAVVK"	"[K].yLTAVVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62737"	"Cytochrome b-245 light chain OS=Rattus norvegicus OX=10116 GN=Cyba PE=1 SV=3"	"Q62737"	"Cytochrome b-245 light chain OS=Rattus norvegicus OX=10116 GN=Cyba PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.40717"	"1251.80705"	"1251.80768"	"-0.50"	"-0.00031"	"12/48"	"12"	"48"	"3341727.44714355"	"HCD"	"MS2"	"17.9759"	"311.4"	"100.000"	"42.7192"	"11929"	"11929"	"11907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"386.9"	""	"368.3"	""	"408.1"	""	"483.7"	"1.3"	"648.3"	"660.6"	""	"100"	"32"	"26.000"	"20.000"	"0.00298517643291918"	"15"	"0.0006037"	"0.004796"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYSLVK"	"[K].aLYSLVk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5HZX7"	"Lipid droplet-associated hydrolase OS=Rattus norvegicus OX=10116 GN=Ldah PE=2 SV=1"	"Q5HZX7"	"Lipid droplet-associated hydrolase OS=Rattus norvegicus OX=10116 GN=Ldah PE=2 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"626.40723"	"1251.80718"	"1251.80768"	"-0.40"	"-0.00025"	"9/48"	"9"	"48"	"2400005.09716797"	"HCD"	"MS2"	"0"	"176.0"	"100.000"	"48.1901"	"14107"	"14107"	"14080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.2"	""	"269.4"	""	"270.9"	""	"262.9"	"2.3"	"301.6"	"280.9"	""	"100"	"20"	"26.000"	"20.000"	"0.0536994706170622"	"17"	"0.0006037"	"0.004645"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"418.24533"	"1252.72144"	"1252.72512"	"-2.94"	"-0.00123"	"9/70"	"9"	"70"	"479726.99609375"	"HCD"	"MS2"	"32.89526"	"9.5"	"100.000"	"71.3815"	"23591"	"23591"	"23562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.5"	""	"8.9"	""	"16.6"	""	"14.9"	""	"19.1"	"21.4"	""	"602"	"21"	"34.000"	"27.000"	"0.239643964475613"	"16"	"0.0001889"	"0.001049"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"626.86505"	"1252.72283"	"1252.72512"	"-1.83"	"-0.00115"	"5/70"	"5"	"70"	"2777977.98449707"	"HCD"	"MS2"	"51.35868"	"130.6"	"100.000"	"72.6686"	"24116"	"24116"	"24095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.3"	""	"173.0"	""	"193.5"	""	"218.9"	""	"239.1"	"236.4"	""	"575"	"34"	"34.000"	"27.000"	"0.010730942036627"	"18"	"0.0001308"	"0.0002749"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"626.86511"	"1252.72295"	"1252.72512"	"-1.74"	"-0.00109"	"8/70"	"8"	"70"	"3521259.59680176"	"HCD"	"MS2"	"68.70931"	"142.7"	"100.000"	"69.6995"	"22904"	"22904"	"22882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.8"	"2.7"	"175.1"	""	"208.4"	""	"270.5"	"0.0"	"264.3"	"255.2"	""	"575"	"5"	"34.000"	"27.000"	"9.13351295311809"	"15"	"0.00175"	"0.02391"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"626.86530"	"1252.72331"	"1252.72512"	"-1.45"	"-0.00091"	"7/70"	"7"	"70"	"1471014.40325928"	"HCD"	"MS2"	"47.96304"	"83.5"	"100.000"	"71.7540"	"23691"	"23691"	"23667"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.8"	""	"107.3"	""	"118.8"	""	"131.9"	"2.8"	"168.8"	"165.8"	""	"575"	"41"	"34.000"	"27.000"	"0.00209719034198189"	"17"	"0.0001889"	"0.0006463"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"418.24606"	"1252.72364"	"1252.72512"	"-1.19"	"-0.00050"	"8/70"	"8"	"70"	"527480.799560547"	"HCD"	"MS2"	"50.52548"	"9.7"	"100.000"	"71.3395"	"23522"	"23522"	"23491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.4"	""	"10.8"	""	"16.1"	""	"17.7"	""	"17.5"	"15.6"	""	"580"	"36"	"34.000"	"27.000"	"0.00656746849201987"	"20"	"0.0001889"	"0.001002"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"626.86572"	"1252.72417"	"1252.72512"	"-0.76"	"-0.00048"	"6/70"	"6"	"70"	"1935750.18841553"	"HCD"	"MS2"	"44.44934"	"96.8"	"100.000"	"71.6354"	"23694"	"23694"	"23674"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.6"	""	"132.2"	""	"134.3"	""	"162.9"	"1.0"	"182.5"	"185.5"	""	"540"	"49"	"34.000"	"27.000"	"0.000363382295595106"	"18"	"0.0001889"	"0.0006125"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"626.86584"	"1252.72441"	"1252.72512"	"-0.57"	"-0.00036"	"6/70"	"6"	"70"	"30202799.6105957"	"HCD"	"MS2"	"2.919178"	"255.6"	"21.461"	"71.3833"	"23540"	"23540"	"23523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"380.4"	""	"345.7"	""	"375.8"	""	"414.6"	""	"427.8"	"475.2"	""	"538"	"50"	"34.000"	"27.000"	"0.000267148217025231"	"21"	"0.0001889"	"0.0005101"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"626.86584"	"1252.72441"	"1252.72512"	"-0.57"	"-0.00036"	"5/70"	"5"	"70"	"6749007.66320801"	"HCD"	"MS2"	"34.6728"	"277.3"	"100.000"	"70.6902"	"23308"	"23308"	"23290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"381.3"	""	"407.4"	""	"422.8"	""	"460.1"	""	"478.0"	"479.2"	""	"538"	"32"	"34.000"	"27.000"	"0.0165482578758955"	"18"	"0.0001889"	"0.0004686"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"626.86591"	"1252.72453"	"1252.72512"	"-0.47"	"-0.00029"	"5/70"	"5"	"70"	"6897032.83001709"	"HCD"	"MS2"	"32.90675"	"281.1"	"100.000"	"70.7564"	"23284"	"23284"	"23267"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"374.9"	""	"410.1"	""	"414.5"	""	"472.3"	""	"478.0"	"516.0"	""	"538"	"35"	"34.000"	"27.000"	"0.00909394409394091"	"18"	"0.0001859"	"0.0003536"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"626.86609"	"1252.72490"	"1252.72512"	"-0.18"	"-0.00011"	"7/70"	"7"	"70"	"8034604.81268311"	"HCD"	"MS2"	"12.13186"	"339.3"	"100.000"	"71.0700"	"23412"	"23412"	"23395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"459.3"	""	"492.5"	""	"521.6"	""	"551.2"	"1.6"	"581.6"	"603.7"	""	"538"	"40"	"34.000"	"27.000"	"0.00254537796407398"	"18"	"0.0001859"	"0.0003341"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.86639"	"1252.72551"	"1252.72512"	"0.31"	"0.00019"	"8/70"	"8"	"70"	"2222914.85113525"	"HCD"	"MS2"	"28.1656"	"101.2"	"100.000"	"72.6888"	"24073"	"24073"	"24049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.7"	""	"139.3"	""	"160.4"	""	"172.6"	""	"182.2"	"183.5"	""	"534"	"24"	"34.000"	"27.000"	"0.10556288755819"	"14"	"0.0001308"	"0.0002981"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.86652"	"1252.72576"	"1252.72512"	"0.50"	"0.00032"	"6/70"	"6"	"70"	"31931963.7875977"	"HCD"	"MS2"	"1.595721"	"289.1"	"25.181"	"71.3127"	"23563"	"23563"	"23546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"411.0"	"3.0"	"411.5"	""	"437.9"	""	"480.6"	""	"479.0"	"514.3"	""	"534"	"50"	"34.000"	"27.000"	"0.000242388081557576"	"16"	"0.0001889"	"0.0006875"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFGFLNGR"	"[R].lVFGFLnGR.[S]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.86652"	"1252.72576"	"1252.72512"	"0.50"	"0.00032"	"7/70"	"7"	"70"	"7457974.246521"	"HCD"	"MS2"	"7.127095"	"288.3"	"100.000"	"71.0036"	"23436"	"23436"	"23418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.7"	""	"438.0"	""	"444.4"	""	"461.6"	"0.4"	"479.0"	"506.9"	""	"534"	"42"	"34.000"	"27.000"	"0.00175594642573897"	"15"	"0.0001889"	"0.0004107"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAVNSIK"	"[K].yAVNSIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"Q9JJ50"	"Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"626.88647"	"1252.76567"	"1252.76654"	"-0.70"	"-0.00044"	"6/54"	"6"	"54"	"6162138.82275391"	"HCD"	"MS2"	"11.82229"	"444.2"	"100.000"	"35.1550"	"8789"	"8789"	"8766"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"630.7"	""	"630.9"	""	"620.7"	""	"726.4"	""	"837.1"	"770.3"	""	"247"	"10"	"30.000"	"23.000"	"1.19582315248264"	"19"	"0.0009727"	"0.01047"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVFSNIK"	"[R].sVFSNIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"626.88733"	"1252.76738"	"1252.76654"	"0.67"	"0.00042"	"12/58"	"12"	"58"	"9645501.7399292"	"HCD"	"MS2"	"6.079252"	"765.4"	"100.000"	"40.2325"	"10913"	"10913"	"10893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"702.1"	""	"778.0"	""	"776.0"	""	"1488.9"	"6.1"	"1770.8"	"1766.0"	""	"238"	"33"	"30.000"	"23.000"	"0.00664579531736828"	"15"	"0.0006396"	"0.006373"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVFSNIK"	"[R].sVFSNIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"626.88782"	"1252.76836"	"1252.76654"	"1.45"	"0.00091"	"12/58"	"12"	"58"	"9111854.59088135"	"HCD"	"MS2"	"7.838127"	"758.8"	"100.000"	"40.0897"	"10811"	"10811"	"10789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"718.6"	""	"777.9"	""	"748.9"	""	"1428.8"	""	"1765.8"	"1791.3"	""	"238"	"34"	"30.000"	"23.000"	"0.0049721813630948"	"16"	"0.0007076"	"0.006945"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSTMTPK"	"[R].mSTMTPk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63524"	"Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Tmed2 PE=1 SV=1"	"Q63524"	"Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Tmed2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"627.35260"	"1253.69792"	"1253.69979"	"-1.49"	"-0.00093"	"9/54"	"9"	"54"	"2657028.00061035"	"HCD"	"MS2"	"8.3106"	"240.4"	"100.000"	"32.5140"	"7761"	"7761"	"7734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"320.9"	""	"310.3"	""	"329.2"	""	"270.1"	""	"522.1"	"535.7"	""	"630"	"20"	"34.000"	"27.000"	"0.351002778081395"	"18"	"0.0005564"	"0.003571"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSTMTPK"	"[R].mSTMTPk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63524"	"Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Tmed2 PE=1 SV=1"	"Q63524"	"Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Tmed2 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"627.35309"	"1253.69890"	"1253.69979"	"-0.71"	"-0.00044"	"9/54"	"9"	"54"	"1781189.17315674"	"HCD"	"MS2"	"5.276008"	"165.1"	"100.000"	"32.4579"	"7695"	"7695"	"7672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.2"	""	"202.0"	""	"216.6"	""	"199.6"	""	"360.9"	"357.9"	""	"635"	"19"	"35.000"	"28.000"	"0.419511363854238"	"23"	"0.0003839"	"0.001573"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEFLSLR"	"[R].imEFLSLR.[S]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"627.35883"	"1253.71037"	"1253.71251"	"-1.70"	"-0.00107"	"7/62"	"7"	"62"	"2485575.28741455"	"HCD"	"MS2"	"15.46841"	"121.2"	"100.000"	"59.2284"	"18638"	"18638"	"18613"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.9"	""	"129.0"	""	"205.6"	""	"297.0"	"1.2"	"209.1"	"198.5"	""	"532"	"17"	"34.000"	"27.000"	"0.478499663424258"	"15"	"0.0003839"	"0.001648"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEFLSLR"	"[R].imEFLSLR.[S]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.35919"	"1253.71111"	"1253.71251"	"-1.12"	"-0.00070"	"11/62"	"11"	"62"	"2807447.26092529"	"HCD"	"MS2"	"14.37804"	"130.4"	"100.000"	"58.5414"	"18309"	"18309"	"18281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.4"	""	"144.0"	""	"165.9"	""	"341.1"	"3.0"	"246.2"	"224.4"	""	"535"	"19"	"34.000"	"27.000"	"0.302917097165512"	"14"	"0.000523"	"0.003083"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEFLSLR"	"[R].imEFLSLR.[S]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.35925"	"1253.71123"	"1253.71251"	"-1.02"	"-0.00064"	"6/62"	"6"	"62"	"2561925.59954834"	"HCD"	"MS2"	"9.643443"	"131.9"	"100.000"	"59.0870"	"18527"	"18527"	"18505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.3"	""	"132.9"	""	"207.7"	""	"318.2"	"2.2"	"240.9"	"228.9"	""	"532"	"21"	"34.000"	"27.000"	"0.22329635641416"	"14"	"0.0004557"	"0.002614"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEFLSLR"	"[R].imEFLSLR.[S]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.35950"	"1253.71172"	"1253.71251"	"-0.63"	"-0.00040"	"11/62"	"11"	"62"	"3052774.47906494"	"HCD"	"MS2"	"23.14727"	"132.5"	"100.000"	"58.7181"	"18431"	"18431"	"18405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.1"	""	"149.3"	""	"163.1"	""	"365.0"	"1.3"	"232.6"	"221.4"	""	"535"	"20"	"34.000"	"27.000"	"0.264437952820731"	"14"	"0.0006037"	"0.004136"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFMLK"	"[R].gEAFMLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"627.36859"	"1253.72991"	"1253.73280"	"-2.31"	"-0.00145"	"6/48"	"6"	"48"	"10986359.9087524"	"HCD"	"MS2"	"0"	"921.1"	"100.000"	"42.8797"	"11950"	"11950"	"11939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2014.5"	""	"1955.7"	""	"1406.3"	""	"972.4"	""	"1093.6"	"1232.5"	""	"489"	"30"	"33.000"	"26.000"	"0.0249619703766528"	"21"	"0.00103"	"0.01262"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFMLK"	"[R].gEAFMLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"627.36871"	"1253.73015"	"1253.73280"	"-2.11"	"-0.00133"	"6/48"	"6"	"48"	"8451342.80737305"	"HCD"	"MS2"	"0"	"755.6"	"100.000"	"43.1063"	"12088"	"12088"	"12066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1640.8"	""	"1612.7"	""	"1114.3"	""	"800.0"	""	"942.7"	"1009.7"	""	"483"	"32"	"33.000"	"26.000"	"0.0137062022206164"	"22"	"0.0006037"	"0.005105"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEAFMLK"	"[R].gEAFMLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"627.36884"	"1253.73039"	"1253.73280"	"-1.92"	"-0.00120"	"6/48"	"6"	"48"	"15847998.8393555"	"HCD"	"MS2"	"0"	"609.1"	"42.329"	"43.3720"	"12193"	"12193"	"12185"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1181.5"	""	"1126.2"	""	"953.8"	""	"650.5"	""	"857.1"	"979.6"	""	"452"	"26"	"33.000"	"26.000"	"0.0552215304908837"	"19"	"0.001783"	"0.02486"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPMSAK"	"[K].fVPmSAk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.3600"	"0.0000"	"1"	"1"	"1"	"627.36951"	"1253.73174"	"1253.73280"	"-0.85"	"-0.00053"	"6/48"	"6"	"48"	"7694293.49371338"	"HCD"	"MS2"	"4.486781"	"388.9"	"100.000"	"34.6572"	"8628"	"8628"	"8602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"500.9"	""	"827.8"	""	"432.7"	""	"985.1"	""	"512.8"	"409.5"	""	"457"	"25"	"33.000"	"26.000"	"0.0767160448545152"	""	"0.005574"	"0.1774"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPMSAK"	"[K].fVPmSAk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"627.37018"	"1253.73308"	"1253.73280"	"0.22"	"0.00014"	"6/48"	"6"	"48"	"6955698.69396973"	"HCD"	"MS2"	"0"	"347.7"	"100.000"	"34.5953"	"8560"	"8560"	"8531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"413.0"	""	"725.9"	""	"404.7"	""	"898.6"	""	"473.6"	"367.2"	""	"463"	"22"	"33.000"	"26.000"	"0.15224778934778"	""	"0.004291"	"0.1132"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLETSAK"	"[K].fLETSAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70550"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1"	"P70550"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"627.37836"	"1253.74944"	"1253.75056"	"-0.90"	"-0.00056"	"5/52"	"5"	"52"	"2418187.98706055"	"HCD"	"MS2"	"0"	"224.6"	"100.000"	"38.0807"	"9990"	"9990"	"9959"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.2"	""	"316.2"	""	"321.7"	""	"368.1"	"2.9"	"434.4"	"405.7"	""	"376"	"11"	"32.000"	"25.000"	"1.63741154911743"	"16"	"0.0009404"	"0.01022"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLNPGNQR"	"[R].lLLNPGNQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"627.37872"	"1253.75017"	"1253.75274"	"-2.05"	"-0.00128"	"5/76"	"5"	"76"	"4742820.73956299"	"HCD"	"MS2"	"28.29141"	"281.0"	"100.000"	"37.7573"	"9857"	"9857"	"9832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"399.8"	""	"378.5"	""	"383.5"	""	"434.8"	"0.2"	"524.5"	"542.4"	""	"382"	"30"	"32.000"	"25.000"	"0.0208465104261713"	"18"	"0.0004557"	"0.002614"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLNPGNQR"	"[R].lLLNPGNQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"627.37952"	"1253.75176"	"1253.75274"	"-0.78"	"-0.00049"	"5/76"	"5"	"76"	"5413267.6026001"	"HCD"	"MS2"	"27.58786"	"283.4"	"100.000"	"37.8689"	"9946"	"9946"	"9921"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"394.7"	""	"399.6"	""	"411.3"	""	"414.4"	"2.0"	"519.5"	"543.9"	""	"370"	"30"	"32.000"	"25.000"	"0.0191501300835679"	"22"	"0.0001889"	"0.0006046"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITFSKL"	"[K].sITFSkL.[-]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"Q62651"	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ech1 PE=1 SV=2"	"Q62651"	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ech1 PE=1 SV=2"	"1"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"627.39667"	"1253.78606"	"1253.78695"	"-0.71"	"-0.00044"	"10/56"	"10"	"56"	"1555154.28820801"	"HCD"	"MS2"	"0"	"163.5"	"100.000"	"48.0135"	"14035"	"14035"	"14006"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.2"	""	"249.3"	""	"265.8"	""	"230.8"	""	"278.4"	"265.1"	""	"207"	"10"	"30.000"	"23.000"	"1.08128542689353"	"16"	"0.006251"	"0.2265"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"627.88458"	"1254.76189"	"1254.76190"	"-0.01"	"-0.00001"	"9/76"	"9"	"76"	"3637667.83770752"	"HCD"	"MS2"	"15.34556"	"159.6"	"100.000"	"56.3918"	"17484"	"17484"	"17461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.3"	""	"211.5"	""	"247.2"	""	"262.5"	""	"283.8"	"275.4"	""	"278"	"27"	"31.000"	"24.000"	"0.0298548435904144"	"21"	"0.0001308"	"0.0002176"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"627.88483"	"1254.76238"	"1254.76190"	"0.38"	"0.00024"	"12/76"	"12"	"76"	"3626616.01281738"	"HCD"	"MS2"	"37.46201"	"164.7"	"100.000"	"56.1978"	"17351"	"17351"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.2"	""	"239.2"	""	"225.8"	""	"263.9"	""	"286.4"	"293.3"	""	"280"	"25"	"31.000"	"24.000"	"0.0462517357451541"	"21"	"0.0001889"	"0.000415"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGIGTVPVGR"	"[K].iGGIGTVPVGR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"627.89001"	"1254.77275"	"1254.77314"	"-0.31"	"-0.00019"	"16/80"	"16"	"80"	"20145428.0836792"	"HCD"	"MS2"	"19.37967"	"785.1"	"100.000"	"40.6048"	"11066"	"11066"	"11037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1060.6"	""	"1126.9"	""	"1147.7"	""	"1376.6"	"5.9"	"1376.1"	"1338.9"	""	"245"	"35"	"30.000"	"23.000"	"0.00361523130266633"	"16"	"0"	"7.693E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGIGTVPVGR"	"[K].iGGIGTVPVGR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"627.89050"	"1254.77373"	"1254.77314"	"0.47"	"0.00030"	"8/80"	"8"	"80"	"21841656.6134644"	"HCD"	"MS2"	"18.12471"	"872.9"	"100.000"	"40.4558"	"10961"	"10961"	"10933"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1169.9"	""	"1258.8"	""	"1289.0"	""	"1536.4"	"8.2"	"1514.3"	"1486.4"	""	"239"	"37"	"30.000"	"23.000"	"0.00224061843714056"	"19"	"0"	"0.0001588"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLVPPSK"	"[R].rLVPPSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"418.94702"	"1254.82651"	"1254.82981"	"-2.63"	"-0.00110"	"4/60"	"4"	"60"	"6547870.89190674"	"HCD"	"MS2"	"55.56171"	"376.2"	"100.000"	"28.4867"	"6111"	"6111"	"6105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"547.8"	""	"631.0"	""	"620.0"	""	"635.7"	"0.5"	"616.1"	"503.2"	""	"49"	"9"	"23.000"	"16.000"	"0.334322868464287"	"13"	"0.004789"	"0.139"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLVPPSK"	"[R].rLVPPSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"418.94711"	"1254.82679"	"1254.82981"	"-2.41"	"-0.00101"	"5/60"	"5"	"60"	"8264261.07574463"	"HCD"	"MS2"	"42.90829"	"435.8"	"100.000"	"28.5651"	"6179"	"6179"	"6172"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"667.1"	""	"737.3"	""	"725.9"	""	"761.4"	""	"683.1"	"540.6"	""	"49"	"15"	"23.000"	"16.000"	"0.0755381047811092"	"13"	"0.0004557"	"0.00259"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLVPPSK"	"[R].rLVPPSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.91724"	"1254.82720"	"1254.82981"	"-2.09"	"-0.00131"	"6/60"	"6"	"60"	"746614.377929688"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"28.9991"	"6286"	"6286"	"6269"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.1"	""	"76.6"	""	"72.9"	""	"74.8"	""	"78.7"	"68.5"	""	"49"	"19"	"23.000"	"16.000"	"0.0283900452258006"	"14"	"0.00803"	"0.3303"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLVPPSK"	"[R].rLVPPSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"418.94733"	"1254.82743"	"1254.82981"	"-1.90"	"-0.00080"	"5/60"	"5"	"60"	"16008651.6237793"	"HCD"	"MS2"	"9.373565"	"626.3"	"75.523"	"28.8914"	"6284"	"6284"	"6275"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"940.3"	""	"1017.8"	""	"1012.8"	""	"1064.1"	""	"929.0"	"960.4"	""	"49"	"15"	"23.000"	"16.000"	"0.0758867728308062"	"13"	"0.0008453"	"0.007895"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLVPPSK"	"[R].rLVPPSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"418.94736"	"1254.82752"	"1254.82981"	"-1.83"	"-0.00076"	"9/60"	"9"	"60"	"17169010.1971436"	"HCD"	"MS2"	"48.42107"	"470.1"	"48.377"	"28.8206"	"6217"	"6217"	"6208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"704.0"	""	"793.5"	""	"758.8"	""	"786.1"	""	"665.0"	"737.2"	""	"49"	"17"	"23.000"	"16.000"	"0.0464692950696731"	"14"	"0.001217"	"0.01697"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLVPPSK"	"[R].rLVPPSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"418.94751"	"1254.82798"	"1254.82981"	"-1.46"	"-0.00061"	"4/60"	"4"	"60"	"8087403.52203369"	"HCD"	"MS2"	"15.68766"	"318.1"	"69.101"	"29.7571"	"6591"	"6591"	"6572"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"459.2"	""	"485.5"	""	"473.0"	""	"546.8"	""	"553.7"	"492.9"	""	"49"	"18"	"23.000"	"16.000"	"0.0402871072187658"	"14"	"0.0009404"	"0.01007"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLVPPSK"	"[R].rLVPPSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"418.94788"	"1254.82907"	"1254.82981"	"-0.59"	"-0.00025"	"5/60"	"5"	"60"	"8136247.80438232"	"HCD"	"MS2"	"16.10669"	"408.6"	"100.000"	"29.8516"	"6671"	"6671"	"6650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"541.0"	""	"563.8"	""	"596.0"	""	"669.4"	"1.1"	"806.8"	"694.2"	""	"48"	"16"	"23.000"	"16.000"	"0.0656464494313611"	"13"	"0.0008453"	"0.008039"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSSVMK"	"[K].mVSSVmk.[M]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"2"	"3"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2;Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"Q5PQN0; P84076; P62749"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"628.36041"	"1255.71355"	"1255.71544"	"-1.50"	"-0.00094"	"6/50"	"6"	"50"	"698018.399780273"	"HCD"	"MS2"	"36.42452"	"68.2"	"100.000"	"32.2865"	"7668"	"7668"	"7642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.4"	""	"90.0"	""	"100.9"	""	"91.5"	""	"131.5"	"145.3"	""	"506"	"11"	"34.000"	"27.000"	"1.89723234961111"	"14"	"0.00806"	"0.3366"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSSVMK"	"[K].mVSSVmk.[M]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"2"	"3"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2;Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"Q5PQN0; P84076; P62749"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"3"	"628.36072"	"1255.71416"	"1255.71544"	"-1.02"	"-0.00064"	"6/50"	"6"	"50"	"773744.46484375"	"HCD"	"MS2"	"42.9668"	"73.1"	"100.000"	"32.1544"	"7571"	"7571"	"7549"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.6"	""	"101.1"	""	"97.9"	""	"104.6"	"0.3"	"141.8"	"148.3"	""	"505"	"12"	"34.000"	"27.000"	"1.52848570875363"	"16"	"0.00806"	"0.338"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLELLGYR"	"[K].yLELLGYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.36511"	"1255.72295"	"1255.72479"	"-1.47"	"-0.00092"	"6/56"	"6"	"56"	"9826329.90411377"	"HCD"	"MS2"	"26.49169"	"412.0"	"100.000"	"60.7310"	"19252"	"19252"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"578.1"	""	"560.9"	""	"625.5"	""	"664.6"	"0.2"	"740.1"	"732.2"	""	"479"	"23"	"33.000"	"26.000"	"0.126271551810766"	"14"	"0.0006037"	"0.004508"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLELLGYR"	"[K].yLELLGYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.36517"	"1255.72307"	"1255.72479"	"-1.37"	"-0.00086"	"6/56"	"6"	"56"	"10701295.211792"	"HCD"	"MS2"	"30.80092"	"328.8"	"68.506"	"60.5627"	"19130"	"19130"	"19113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"449.8"	""	"456.2"	""	"512.7"	""	"522.2"	""	"587.7"	"587.3"	""	"485"	"23"	"33.000"	"26.000"	"0.122098897631067"	"14"	"0.0006037"	"0.005571"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSLVPIGR"	"[K].aVDSLVPIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.38177"	"1255.75627"	"1255.75715"	"-0.70"	"-0.00044"	"9/74"	"9"	"74"	"3480526.30377197"	"HCD"	"MS2"	"0"	"176.0"	"100.000"	"44.4403"	"12628"	"12628"	"12604"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.4"	""	"254.5"	""	"239.2"	""	"285.6"	"1.0"	"332.1"	"332.7"	""	"343"	"36"	"32.000"	"25.000"	"0.00432776952480419"	"15"	"0.0001308"	"0.0003068"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSLVPIGR"	"[K].aVDSLVPIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.38257"	"1255.75786"	"1255.75715"	"0.56"	"0.00035"	"6/74"	"6"	"74"	"3038540.98620605"	"HCD"	"MS2"	"0"	"176.8"	"100.000"	"44.2293"	"12492"	"12492"	"12470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"213.5"	""	"233.8"	""	"251.5"	""	"304.8"	"0.5"	"328.4"	"343.8"	""	"327"	"28"	"32.000"	"25.000"	"0.0232550756694581"	"14"	"0.0001889"	"0.0008747"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPQPQK"	"[K].sLPQPQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"628.39185"	"1255.77641"	"1255.77744"	"-0.82"	"-0.00051"	"6/54"	"6"	"54"	"2842448.89141846"	"HCD"	"MS2"	"8.613954"	"188.5"	"100.000"	"32.0891"	"7587"	"7587"	"7562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"315.4"	""	"277.8"	""	"252.3"	""	"290.4"	""	"321.9"	"326.7"	""	"262"	"16"	"31.000"	"24.000"	"0.359146216522553"	""	"0.001966"	"0.02767"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPQPQK"	"[K].sLPQPQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"1"	"628.39191"	"1255.77654"	"1255.77744"	"-0.72"	"-0.00045"	"6/54"	"6"	"54"	"3185747.97705078"	"HCD"	"MS2"	"13.9115"	"193.9"	"100.000"	"31.5600"	"7328"	"7328"	"7302"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"357.7"	""	"309.8"	""	"236.9"	""	"308.3"	"2.0"	"325.8"	"292.2"	""	"262"	"24"	"31.000"	"24.000"	"0.0575799516223551"	""	"0.0006037"	"0.003956"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPQPQK"	"[K].sLPQPQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"628.39197"	"1255.77666"	"1255.77744"	"-0.62"	"-0.00039"	"6/54"	"6"	"54"	"3645052.62017822"	"HCD"	"MS2"	"16.2398"	"224.8"	"100.000"	"31.9338"	"7481"	"7481"	"7460"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"385.8"	""	"350.9"	""	"271.7"	""	"362.2"	""	"382.3"	"374.6"	""	"262"	"18"	"31.000"	"24.000"	"0.18632507111309"	""	"0.001999"	"0.0313"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPQPQK"	"[K].sLPQPQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"628.39215"	"1255.77703"	"1255.77744"	"-0.33"	"-0.00021"	"6/54"	"6"	"54"	"5628580.25939941"	"HCD"	"MS2"	"13.54978"	"304.5"	"100.000"	"31.7478"	"7447"	"7447"	"7418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"583.4"	""	"520.8"	""	"389.3"	""	"430.6"	""	"494.5"	"458.8"	""	"262"	"15"	"31.000"	"24.000"	"0.390185652255224"	""	"0.0008731"	"0.009478"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPIPVIK"	"[R].mPIPVIk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"628.41376"	"1255.82024"	"1255.82122"	"-0.78"	"-0.00049"	"6/50"	"6"	"50"	"16001930.7301636"	"HCD"	"MS2"	"6.602597"	"820.4"	"100.000"	"52.9802"	"16106"	"16106"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1589.6"	""	"1418.6"	""	"1322.6"	""	"788.6"	""	"1240.9"	"1389.1"	""	"135"	"24"	"28.000"	"21.000"	"0.028333731419393"	""	"0.00109"	"0.01492"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPIPVIK"	"[R].mPIPVIk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"628.41388"	"1255.82048"	"1255.82122"	"-0.59"	"-0.00037"	"6/50"	"6"	"50"	"14738575.1323853"	"HCD"	"MS2"	"0"	"791.4"	"100.000"	"52.7839"	"15976"	"15976"	"15954"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1530.5"	""	"1335.0"	""	"1282.5"	""	"755.2"	"3.9"	"1204.0"	"1362.1"	""	"135"	"24"	"28.000"	"21.000"	"0.0288604948152321"	""	"0.001058"	"0.01318"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVYSWIGR"	"[R].fVYSWIGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BK63"	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufa9 PE=1 SV=2"	"Q5BK63"	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufa9 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"628.85297"	"1256.69866"	"1256.69891"	"-0.20"	"-0.00013"	"5/56"	"5"	"56"	"2443059.41064453"	"HCD"	"MS2"	"27.64921"	"163.1"	"100.000"	"59.3742"	"18644"	"18644"	"18617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.1"	""	"241.9"	""	"239.5"	""	"269.9"	"0.9"	"297.8"	"301.8"	""	"572"	"8"	"34.000"	"27.000"	"4.20112915406146"	"17"	"0.0004166"	"0.002453"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LADFGVLHR"	"[R].lADFGVLHR.[NA]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5; Q68FW7"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1; Threonine--tRNA ligase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tars2 PE=2 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"419.58133"	"1256.72943"	"1256.73127"	"-1.46"	"-0.00061"	"5/64"	"5"	"64"	"5361592.85858154"	"HCD"	"MS2"	"100"	"194.2"	"100.000"	"41.4533"	"11370"	"11370"	"11341"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.0"	""	"276.3"	""	"250.5"	""	"344.5"	""	"337.5"	"369.3"	""	"514"	"1"	"34.000"	"27.000"	"22.9051491100373"	"13"	"0.001783"	"0.02499"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADFGVLHR"	"[R].lADFGVLHR.[NA]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5; Q68FW7"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1; Threonine--tRNA ligase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tars2 PE=2 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"419.58139"	"1256.72962"	"1256.73127"	"-1.32"	"-0.00055"	"10/64"	"10"	"64"	"5061991.79785156"	"HCD"	"MS2"	"33.7643"	"121.6"	"100.000"	"41.6253"	"11484"	"11484"	"11461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.1"	""	"157.0"	""	"189.8"	""	"196.3"	"6.9"	"213.6"	"219.0"	""	"514"	"39"	"34.000"	"27.000"	"0.00348283678974216"	"21"	"0.0001308"	"0.0002371"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLYQVVR"	"[R].hLLYQVVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.3103"	"0.0000"	"1"	"1"	"1"	"419.59195"	"1256.76130"	"1256.76766"	"-5.06"	"-0.00212"	"11/64"	"11"	"64"	"4106183.85125732"	"HCD"	"MS2"	"48.76952"	"103.1"	"100.000"	"33.6762"	"8230"	"8230"	"8210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.6"	""	"145.2"	""	"146.2"	""	"196.2"	"3.5"	"192.7"	"178.2"	""	"382"	"29"	"32.000"	"25.000"	"0.0221326475025629"	""	"0.0003839"	"0.001966"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPWGPK"	"[K].tLPWGPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.89142"	"1256.77556"	"1256.77671"	"-0.92"	"-0.00058"	"6/48"	"6"	"48"	"4141778.98303223"	"HCD"	"MS2"	"19.77948"	"289.2"	"100.000"	"44.8161"	"12731"	"12731"	"12704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"384.8"	""	"327.4"	""	"376.9"	""	"575.4"	"12.0"	"562.5"	"503.2"	""	"383"	"23"	"32.000"	"25.000"	"0.0871302135187343"	"14"	"0.0007793"	"0.007243"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGQILWVR"	"[R].rGQILWVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"1"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"419.59695"	"1256.77631"	"1256.77889"	"-2.05"	"-0.00086"	"7/72"	"7"	"72"	"4103880.14312744"	"HCD"	"MS2"	"0"	"170.5"	"100.000"	"33.4883"	"8155"	"8155"	"8135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.2"	""	"230.8"	""	"234.5"	""	"307.7"	""	"340.3"	"308.7"	""	"383"	"32"	"32.000"	"25.000"	"0.0110196748000066"	"24"	"0.0001889"	"0.0009233"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVSAHTR"	"[R].kVSAHTR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"419.59854"	"1256.78107"	"1256.78393"	"-2.27"	"-0.00095"	"6/66"	"6"	"66"	"2748421.36437988"	"HCD"	"MS2"	"61.47499"	"259.9"	"100.000"	"18.9207"	"2384"	"2384"	"2367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"382.3"	""	"395.5"	""	"356.7"	""	"423.3"	""	"413.2"	"490.5"	""	"353"	"9"	"32.000"	"25.000"	"2.19656828977649"	"13"	"0.0008125"	"0.00757"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVSAHTR"	"[R].kVSAHTR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"419.59866"	"1256.78144"	"1256.78393"	"-1.98"	"-0.00083"	"5/66"	"5"	"66"	"1189207.25"	"HCD"	"MS2"	"26.17956"	"125.6"	"100.000"	"18.9027"	"2402"	"2402"	"2380"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.5"	""	"184.2"	""	"187.7"	""	"205.1"	"0.3"	"195.4"	"221.2"	""	"353"	"5"	"32.000"	"25.000"	"5.67211085070016"	"13"	"0.0001889"	"0.001098"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAALITAVGVR"	"[K].gAALITAVGVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"628.89777"	"1256.78826"	"1256.78879"	"-0.42"	"-0.00027"	"9/80"	"9"	"80"	"5937019.27526855"	"HCD"	"MS2"	"17.9001"	"360.2"	"100.000"	"42.5521"	"11817"	"11817"	"11788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.7"	""	"500.0"	""	"536.9"	""	"554.0"	"17.9"	"667.5"	"673.2"	""	"343"	"58"	"32.000"	"25.000"	"2.9666350560539E-05"	"24"	"0"	"3.847E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAALITAVGVR"	"[K].gAALITAVGVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"628.89783"	"1256.78838"	"1256.78879"	"-0.33"	"-0.00020"	"9/80"	"9"	"80"	"5835798.27624512"	"HCD"	"MS2"	"0"	"362.8"	"100.000"	"42.8017"	"11963"	"11963"	"11939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"485.9"	""	"522.7"	""	"557.1"	""	"552.2"	"20.8"	"633.7"	"663.6"	""	"343"	"55"	"32.000"	"25.000"	"5.71826297888948E-05"	"24"	"0"	"4.656E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGAAEK"	"[R].iIPGAAEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"628.90192"	"1256.79656"	"1256.79784"	"-1.02"	"-0.00064"	"7/56"	"7"	"56"	"11590515.6712036"	"HCD"	"MS2"	"26.89428"	"648.5"	"100.000"	"37.9423"	"9976"	"9976"	"9953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"891.7"	""	"855.9"	""	"937.4"	""	"1100.1"	""	"1164.0"	"1194.6"	""	"288"	"36"	"31.000"	"24.000"	"0.00384027647691093"	""	"0.0002277"	"0.001152"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGAAEK"	"[R].iIPGAAEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"628.90204"	"1256.79680"	"1256.79784"	"-0.83"	"-0.00052"	"7/56"	"7"	"56"	"12189000.211731"	"HCD"	"MS2"	"11.75235"	"575.0"	"83.878"	"37.8581"	"9898"	"9898"	"9879"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"771.6"	""	"746.0"	""	"827.6"	""	"977.8"	""	"1055.4"	"1070.5"	""	"288"	"33"	"31.000"	"24.000"	"0.00768002249502175"	""	"0.0003839"	"0.001931"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGLRPK"	"[K].dLGLRPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"419.60767"	"1256.80844"	"1256.80908"	"-0.50"	"-0.00021"	"5/52"	"5"	"52"	"19365555.8026123"	"HCD"	"MS2"	"15.30582"	"1149.1"	"97.215"	"31.6262"	"7397"	"7397"	"7373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1757.0"	""	"1785.4"	""	"1694.9"	""	"1664.1"	""	"1920.0"	"2058.5"	""	"258"	"7"	"31.000"	"24.000"	"2.60369260914921"	"13"	"0.002981"	"0.05436"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGLRPK"	"[K].dLGLRPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"419.60776"	"1256.80872"	"1256.80908"	"-0.28"	"-0.00012"	"5/52"	"5"	"52"	"19139361.6238403"	"HCD"	"MS2"	"12.18244"	"1169.4"	"91.150"	"31.5024"	"7304"	"7304"	"7286"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1787.7"	""	"1728.8"	""	"1722.1"	""	"1760.9"	""	"1956.0"	"2112.6"	""	"258"	"6"	"31.000"	"24.000"	"3.03102633889432"	"13"	"0.004377"	"0.1279"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAISLPK"	"[K].aVAISLPk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"419.61566"	"1256.83243"	"1256.83423"	"-1.43"	"-0.00060"	"7/56"	"7"	"56"	"3955532.67791748"	"HCD"	"MS2"	"7.238269"	"166.1"	"100.000"	"45.3888"	"13014"	"13014"	"12987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.7"	""	"220.0"	""	"287.1"	""	"269.3"	"2.1"	"296.4"	"284.7"	""	"152"	"28"	"28.000"	"21.000"	"0.0117710063037349"	"20"	"0.000523"	"0.003118"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLLNPK"	"[K].lTLLNPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.5217"	"0.0000"	"1"	"1"	"1"	"419.61581"	"1256.83289"	"1256.83423"	"-1.07"	"-0.00045"	"5/52"	"5"	"52"	"8744373.09454346"	"HCD"	"MS2"	"6.015917"	"326.0"	"100.000"	"48.1212"	"14127"	"14127"	"14098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"482.6"	""	"433.1"	""	"464.5"	""	"530.7"	"1.1"	"538.2"	"635.7"	""	"152"	"23"	"28.000"	"21.000"	"0.0383542586148282"	""	"0.002711"	"0.04104"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAISLPK"	"[K].aVAISLPk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"628.92029"	"1256.83330"	"1256.83423"	"-0.74"	"-0.00047"	"7/56"	"7"	"56"	"10560770.4854736"	"HCD"	"MS2"	"16.03512"	"722.8"	"100.000"	"45.4578"	"13042"	"13042"	"13019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1124.4"	""	"942.3"	""	"1142.4"	""	"1214.2"	"72.3"	"1134.0"	"1204.4"	""	"152"	"28"	"28.000"	"21.000"	"0.0118799220840713"	""	"0.0003839"	"0.002015"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAISLPK"	"[K].aVAISLPk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"419.61606"	"1256.83362"	"1256.83423"	"-0.48"	"-0.00020"	"7/56"	"7"	"56"	"2618810.29229736"	"HCD"	"MS2"	"15.61158"	"120.0"	"100.000"	"45.0946"	"12845"	"12845"	"12816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.5"	""	"160.7"	""	"198.4"	""	"208.6"	"0.6"	"217.7"	"195.8"	""	"152"	"25"	"28.000"	"21.000"	"0.0216677388330297"	"19"	"0.0006037"	"0.006133"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLLNPK"	"[K].lTLLNPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"419.61615"	"1256.83390"	"1256.83423"	"-0.27"	"-0.00011"	"5/52"	"5"	"52"	"8815216.40490723"	"HCD"	"MS2"	"27.08508"	"351.1"	"100.000"	"47.8234"	"13957"	"13957"	"13928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"501.0"	""	"473.2"	""	"520.7"	""	"560.9"	"2.0"	"566.9"	"698.9"	""	"152"	"26"	"28.000"	"21.000"	"0.0205028196865814"	""	"0.003286"	"0.07257"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLLNPK"	"[K].lTLLNPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"628.92108"	"1256.83489"	"1256.83423"	"0.52"	"0.00033"	"6/52"	"6"	"52"	"8995937.32025146"	"HCD"	"MS2"	"27.98667"	"588.1"	"100.000"	"47.7314"	"13919"	"13919"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"918.8"	""	"816.6"	""	"826.2"	""	"927.0"	"12.4"	"946.6"	"1117.5"	""	"118"	"35"	"27.000"	"20.000"	"0.00201303817856938"	""	"0.0009404"	"0.01006"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDILSYMR"	"[K].mDILSYMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"629.32990"	"1257.65251"	"1257.65328"	"-0.61"	"-0.00038"	"6/62"	"6"	"62"	"3748370.90655518"	"HCD"	"MS2"	"4.464784"	"185.2"	"100.000"	"63.0891"	"20214"	"20214"	"20195"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.1"	""	"317.0"	""	"290.4"	""	"222.6"	"3.9"	"304.5"	"323.8"	""	"492"	"14"	"33.000"	"26.000"	"0.970364963105187"	"17"	"0.0003839"	"0.001822"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDILSYMR"	"[K].mDILSYMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"629.33020"	"1257.65312"	"1257.65328"	"-0.13"	"-0.00008"	"6/62"	"6"	"62"	"6651137.72686768"	"HCD"	"MS2"	"15.40812"	"314.7"	"100.000"	"62.6851"	"19996"	"19996"	"19977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"568.0"	""	"503.9"	""	"430.9"	""	"344.1"	"1.3"	"502.7"	"625.5"	""	"492"	"35"	"33.000"	"26.000"	"0.0085690979498859"	"16"	"0.0001889"	"0.001021"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDILSYMR"	"[K].mDILSYMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"629.33038"	"1257.65349"	"1257.65328"	"0.17"	"0.00010"	"6/62"	"6"	"62"	"6261354.01873779"	"HCD"	"MS2"	"27.31298"	"283.5"	"100.000"	"62.7828"	"20089"	"20089"	"20067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"519.7"	""	"459.5"	""	"393.1"	""	"304.1"	"3.3"	"476.7"	"525.1"	""	"474"	"34"	"33.000"	"26.000"	"0.00858515906247576"	"15"	"0.0002277"	"0.001168"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDILSYMR"	"[K].mDILSYMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"629.33051"	"1257.65373"	"1257.65328"	"0.36"	"0.00023"	"6/62"	"6"	"62"	"3561897.89892578"	"HCD"	"MS2"	"15.4966"	"184.2"	"100.000"	"63.0031"	"20126"	"20126"	"20105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.2"	""	"275.1"	""	"290.4"	""	"226.7"	"2.6"	"320.0"	"343.6"	""	"477"	"12"	"33.000"	"26.000"	"1.45040197804974"	"16"	"0.0004166"	"0.002323"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGYMPK"	"[R].gmGYMPk.[R]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"629.34021"	"1257.67314"	"1257.67357"	"-0.34"	"-0.00021"	"9/50"	"9"	"50"	"1436316.5994873"	"HCD"	"MS2"	"0"	"121.6"	"100.000"	"31.2543"	"7245"	"7245"	"7216"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"217.5"	""	"149.6"	""	"160.0"	""	"135.1"	""	"240.9"	"250.6"	""	"561"	"14"	"34.000"	"27.000"	"1.01375466470412"	"15"	"0.005603"	"0.1789"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGYMPK"	"[R].gMGYmPk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.34039"	"1257.67351"	"1257.67357"	"-0.05"	"-0.00003"	"6/50"	"6"	"50"	"1608799.24212646"	"HCD"	"MS2"	"0"	"119.5"	"100.000"	"30.7410"	"7036"	"7036"	"7008"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.4"	""	"178.4"	""	"185.2"	""	"122.3"	""	"206.6"	"219.9"	""	"561"	"19"	"34.000"	"27.000"	"0.342714804676247"	"14"	"0.003818"	"0.09431"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGFVDSK"	"[K].mGFVDSk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.34900"	"1257.69072"	"1257.69133"	"-0.48"	"-0.00030"	"5/50"	"5"	"50"	"1163282.14086914"	"HCD"	"MS2"	"0"	"108.9"	"100.000"	"32.5084"	"7716"	"7716"	"7688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.9"	""	"120.3"	""	"144.4"	""	"189.9"	""	"221.2"	"226.2"	""	"597"	"7"	"34.000"	"27.000"	"5.75366186587494"	"13"	"0.00317"	"0.064"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMVAGFK"	"[K].mmVAGFk.[K]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"629.35840"	"1257.70952"	"1257.70996"	"-0.35"	"-0.00022"	"4/50"	"4"	"50"	"7658385.9119873"	"HCD"	"MS2"	"31.85338"	"512.1"	"100.000"	"40.3196"	"10949"	"10949"	"10925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"731.5"	""	"679.0"	""	"695.1"	""	"727.1"	"2.2"	"1050.5"	"971.9"	""	"542"	"16"	"34.000"	"27.000"	"0.635286008951699"	"16"	"0.0009404"	"0.009806"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMVAGFK"	"[K].mmVAGFk.[K]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"629.35858"	"1257.70989"	"1257.70996"	"-0.06"	"-0.00004"	"4/50"	"4"	"50"	"8012316.70703125"	"HCD"	"MS2"	"29.72254"	"523.8"	"100.000"	"40.1690"	"10843"	"10843"	"10821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"729.8"	""	"694.5"	""	"714.3"	""	"773.0"	"0.1"	"1056.7"	"999.3"	""	"544"	"15"	"34.000"	"27.000"	"0.923780741445912"	"15"	"0.0007793"	"0.007287"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPWLENR"	"[R].tIPWLENR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"629.35913"	"1257.71099"	"1257.71529"	"-3.42"	"-0.00215"	"5/68"	"5"	"68"	"6852478.07000732"	"HCD"	"MS2"	"54.81746"	"323.5"	"100.000"	"50.0776"	"14872"	"14872"	"14857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"414.2"	""	"407.4"	""	"392.9"	""	"503.9"	""	"639.5"	"719.1"	""	"543"	"11"	"34.000"	"27.000"	"2.21702113823858"	"16"	"0.0006037"	"0.004233"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"419.91330"	"1257.72535"	"1257.72772"	"-1.88"	"-0.00079"	"5/50"	"5"	"50"	"3106795.92224121"	"HCD"	"MS2"	"65.59505"	"176.6"	"100.000"	"35.1206"	"8775"	"8775"	"8750"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"288.7"	""	"238.4"	""	"249.4"	""	"234.9"	"1.2"	"311.3"	"348.3"	""	"539"	"18"	"34.000"	"27.000"	"0.395875631825022"	""	"0.002711"	"0.04202"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"629.36688"	"1257.72649"	"1257.72772"	"-0.98"	"-0.00061"	"12/50"	"12"	"50"	"4975772.21020508"	"HCD"	"MS2"	"0"	"431.8"	"100.000"	"35.2284"	"8819"	"8819"	"8795"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"671.4"	""	"568.8"	""	"536.8"	""	"486.4"	""	"850.9"	"988.8"	""	"532"	"25"	"34.000"	"27.000"	"0.0901325455330279"	"23"	"0.0006037"	"0.004165"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"629.36707"	"1257.72685"	"1257.72772"	"-0.68"	"-0.00043"	"12/50"	"12"	"50"	"18812440.3399658"	"HCD"	"MS2"	"14.25653"	"1403.1"	"100.000"	"34.9165"	"8691"	"8691"	"8670"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2480.6"	""	"1919.7"	""	"1733.6"	""	"1503.3"	""	"2702.8"	"2961.1"	""	"548"	"23"	"34.000"	"27.000"	"0.126401015429544"	"23"	"0.001007"	"0.01102"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"629.36707"	"1257.72685"	"1257.72772"	"-0.68"	"-0.00043"	"12/50"	"12"	"50"	"19862356.5925293"	"HCD"	"MS2"	"31.49322"	"1572.8"	"100.000"	"34.9740"	"8758"	"8758"	"8730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2777.4"	""	"2221.8"	""	"1890.3"	""	"1691.3"	""	"3031.3"	"3303.4"	""	"548"	"23"	"34.000"	"27.000"	"0.129643444955446"	"23"	"0.00103"	"0.01125"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"629.36719"	"1257.72710"	"1257.72772"	"-0.49"	"-0.00031"	"12/50"	"12"	"50"	"5150105.84545898"	"HCD"	"MS2"	"2.434221"	"420.7"	"100.000"	"35.2811"	"8884"	"8884"	"8858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"673.1"	""	"562.0"	""	"509.2"	""	"472.7"	"0.1"	"827.2"	"947.5"	""	"548"	"26"	"34.000"	"27.000"	"0.0737480536275975"	"24"	"0.0006037"	"0.005381"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAVDLITR"	"[R].vAAAVDLITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8039"	"0.0000"	"1"	"1"	"1"	"419.92862"	"1257.77130"	"1257.77280"	"-1.19"	"-0.00050"	"12/78"	"12"	"78"	"937804.825744629"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"51.2397"	"15395"	"15395"	"15366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.8"	""	"35.8"	""	"38.3"	""	"42.6"	""	"50.3"	"57.3"	""	"504"	"51"	"34.000"	"27.000"	"0.000181719084754091"	"26"	"0"	"0.0001726"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAVDLITR"	"[R].vAAAVDLITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"629.38965"	"1257.77202"	"1257.77280"	"-0.62"	"-0.00039"	"8/78"	"8"	"78"	"9251433.63531494"	"HCD"	"MS2"	"19.09162"	"366.1"	"87.426"	"51.0280"	"15308"	"15308"	"15286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"499.4"	""	"476.8"	""	"564.0"	""	"596.5"	""	"610.5"	"722.4"	""	"503"	"54"	"34.000"	"27.000"	"0.000102220497285051"	""	"0"	"0.0001677"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAVDLITR"	"[R].vAAAVDLITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7193"	"0.0000"	"1"	"1"	"1"	"629.38977"	"1257.77226"	"1257.77280"	"-0.43"	"-0.00027"	"8/78"	"8"	"78"	"8755987.9239502"	"HCD"	"MS2"	"2.156439"	"326.5"	"100.000"	"51.1314"	"15300"	"15300"	"15282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"463.9"	""	"410.6"	""	"527.9"	""	"492.6"	""	"529.0"	"669.1"	""	"503"	"57"	"34.000"	"27.000"	"5.19443109186348E-05"	""	"0"	"8.444E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAVDLITR"	"[R].vAAAVDLITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"629.38995"	"1257.77263"	"1257.77280"	"-0.14"	"-0.00009"	"9/78"	"9"	"78"	"8687610.53186035"	"HCD"	"MS2"	"2.867474"	"338.2"	"100.000"	"51.3364"	"15434"	"15434"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"467.9"	""	"428.4"	""	"517.5"	""	"534.0"	""	"561.0"	"696.8"	""	"503"	"47"	"34.000"	"27.000"	"0.000533995982193056"	""	"0"	"0.0001362"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAVDLITR"	"[R].vAAAVDLITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"629.39001"	"1257.77275"	"1257.77280"	"-0.04"	"-0.00002"	"8/78"	"8"	"78"	"7997806.93682861"	"HCD"	"MS2"	"24.06565"	"375.8"	"100.000"	"50.8184"	"15172"	"15172"	"15154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"514.1"	""	"508.0"	""	"567.9"	""	"587.2"	""	"631.3"	"754.7"	""	"503"	"45"	"34.000"	"27.000"	"0.00085810017272915"	"27"	"0"	"0.0001324"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQGPVLLVR"	"[R].fQGPVLLVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG55"	"Protein ABHD16A OS=Rattus norvegicus OX=10116 GN=Abhd16a PE=2 SV=1"	"Q6MG55"	"Protein ABHD16A OS=Rattus norvegicus OX=10116 GN=Abhd16a PE=2 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"629.39697"	"1257.78667"	"1257.78806"	"-1.11"	"-0.00069"	"6/80"	"6"	"80"	"2211773.88116455"	"HCD"	"MS2"	"12.86524"	"132.5"	"100.000"	"52.3332"	"15842"	"15842"	"15814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.1"	""	"173.3"	""	"179.5"	""	"211.0"	"0.7"	"240.0"	"274.4"	""	"455"	"25"	"33.000"	"26.000"	"0.0656117166961303"	"26"	"0.0001889"	"0.0006973"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLNASK"	"[K].aVPLNASk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"629.39899"	"1257.79070"	"1257.79309"	"-1.90"	"-0.00120"	"6/62"	"6"	"62"	"4879540.79284668"	"HCD"	"MS2"	"0"	"313.2"	"100.000"	"33.2684"	"8068"	"8068"	"8059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"353.2"	""	"376.7"	""	"381.5"	""	"575.8"	""	"644.8"	"644.6"	""	"419"	"49"	"33.000"	"26.000"	"0.000258335462561456"	"20"	"0.0001889"	"0.000751"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLNASK"	"[K].aVPLNASk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"629.40015"	"1257.79302"	"1257.79309"	"-0.06"	"-0.00004"	"5/62"	"5"	"62"	"2542913.63397217"	"HCD"	"MS2"	"0"	"186.2"	"100.000"	"33.2669"	"8025"	"8025"	"8009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.6"	""	"209.2"	""	"239.5"	""	"307.7"	""	"390.2"	"394.5"	""	"406"	"33"	"33.000"	"26.000"	"0.00989682834909875"	"18"	"0.0001889"	"0.0006918"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLSVVLLR"	"[R].tQLSVVLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"629.40723"	"1257.80718"	"1257.80919"	"-1.60"	"-0.00101"	"7/84"	"7"	"84"	"20333409.4815674"	"HCD"	"MS2"	"15.15052"	"478.0"	"51.341"	"50.0446"	"14908"	"14908"	"14894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"533.9"	""	"702.2"	""	"681.9"	""	"763.5"	""	"870.3"	"982.8"	""	"344"	"56"	"32.000"	"25.000"	"4.28083458744571E-05"	""	"0.0001889"	"0.0004898"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLSVVLLR"	"[R].tQLSVVLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"629.40784"	"1257.80840"	"1257.80919"	"-0.63"	"-0.00040"	"7/84"	"7"	"84"	"20340887.7949219"	"HCD"	"MS2"	"6.897777"	"402.6"	"41.017"	"49.8063"	"14764"	"14764"	"14751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.6"	""	"589.2"	""	"569.7"	""	"639.8"	"4.6"	"743.8"	"833.4"	""	"344"	"53"	"32.000"	"25.000"	"9.38703521076985E-05"	""	"0.0001889"	"0.0004365"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPLTDK"	"[R].lLPLTDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"629.41223"	"1257.81719"	"1257.81825"	"-0.84"	"-0.00053"	"6/50"	"6"	"50"	"11649066.2788696"	"HCD"	"MS2"	"17.87454"	"505.1"	"73.446"	"49.5525"	"14708"	"14708"	"14686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"789.6"	""	"829.2"	""	"848.5"	""	"605.0"	""	"789.3"	"922.2"	""	"331"	"27"	"32.000"	"25.000"	"0.0360410967324448"	"25"	"0.0008125"	"0.007815"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPLTDK"	"[R].lLPLTDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"629.41241"	"1257.81755"	"1257.81825"	"-0.55"	"-0.00035"	"7/50"	"7"	"50"	"11003210.0566406"	"HCD"	"MS2"	"23.08635"	"574.7"	"89.691"	"49.2731"	"14550"	"14550"	"14527"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"870.1"	""	"980.6"	""	"960.7"	""	"679.9"	""	"894.6"	"1048.1"	""	"331"	"24"	"32.000"	"25.000"	"0.0654331756212752"	"24"	"0.001058"	"0.01352"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"629.83801"	"1258.66875"	"1258.67031"	"-1.24"	"-0.00078"	"6/66"	"6"	"66"	"5418815.02453613"	"HCD"	"MS2"	"46.46135"	"330.6"	"100.000"	"39.2080"	"10453"	"10453"	"10422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.7"	""	"383.2"	""	"401.8"	""	"616.8"	""	"707.0"	"681.8"	""	"591"	"48"	"34.000"	"27.000"	"0.000453479318417192"	"20"	"0.00286"	"0.04906"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.83826"	"1258.66924"	"1258.67031"	"-0.85"	"-0.00054"	"8/66"	"8"	"66"	"9847641.96850586"	"HCD"	"MS2"	"13.54232"	"430.6"	"98.792"	"38.4167"	"10171"	"10171"	"10145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"444.3"	""	"472.3"	""	"517.3"	""	"846.1"	"3.5"	"929.2"	"879.8"	""	"592"	"59"	"34.000"	"27.000"	"4.18111113208335E-05"	"16"	"0.0001889"	"0.001082"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9831"	"0.0000"	"1"	"1"	"1"	"629.83838"	"1258.66948"	"1258.67031"	"-0.66"	"-0.00042"	"8/66"	"8"	"66"	"11334148.5803223"	"HCD"	"MS2"	"25.14248"	"336.8"	"70.102"	"38.3031"	"10081"	"10081"	"10055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"329.8"	""	"373.3"	""	"402.3"	""	"670.0"	""	"713.3"	"716.2"	""	"592"	"59"	"34.000"	"27.000"	"4.07654002792609E-05"	"17"	"0.0001889"	"0.00107"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.83868"	"1258.67009"	"1258.67031"	"-0.17"	"-0.00011"	"8/66"	"8"	"66"	"6353763.39025879"	"HCD"	"MS2"	"55.92575"	"383.9"	"100.000"	"38.7773"	"10276"	"10276"	"10246"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"509.7"	""	"471.2"	""	"489.9"	""	"643.6"	"7.0"	"776.0"	"744.8"	""	"600"	"42"	"34.000"	"27.000"	"0.00176246805758933"	"15"	"0.00274"	"0.04409"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.83905"	"1258.67082"	"1258.67031"	"0.41"	"0.00026"	"7/66"	"7"	"66"	"5527990.6986084"	"HCD"	"MS2"	"48.47216"	"315.2"	"100.000"	"38.9137"	"10375"	"10375"	"10350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"383.5"	""	"408.6"	""	"421.7"	""	"533.1"	""	"628.7"	"617.5"	""	"634"	"34"	"35.000"	"28.000"	"0.0132452226226979"	"15"	"0.003762"	"0.08712"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSQFGK"	"[K].sFSQFGk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.86292"	"1258.71855"	"1258.71959"	"-0.83"	"-0.00052"	"10/58"	"10"	"58"	"9207370.15179443"	"HCD"	"MS2"	"25.79157"	"444.7"	"68.492"	"38.6834"	"10237"	"10237"	"10214"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"555.3"	""	"519.2"	""	"578.3"	""	"766.6"	"0.9"	"911.6"	"889.4"	""	"773"	"15"	"35.000"	"28.000"	"1.26808830788221"	"14"	"0.001007"	"0.01082"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSQFGK"	"[K].sFSQFGk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"629.86322"	"1258.71916"	"1258.71959"	"-0.34"	"-0.00022"	"10/58"	"10"	"58"	"12546850.6671143"	"HCD"	"MS2"	"17.5867"	"485.2"	"56.381"	"38.7487"	"10307"	"10307"	"10286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"619.6"	""	"557.3"	""	"596.5"	""	"852.5"	"5.4"	"992.8"	"981.7"	""	"766"	"15"	"35.000"	"28.000"	"1.28587506255052"	"15"	"0.00103"	"0.01129"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDELTLAR"	"[R].vLDELTLAR.[AT]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFV3; Q6IFU8; Q6IFW5; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 12 OS=Rattus norvegicus OX=10116 GN=Krt12 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"629.88068"	"1258.75408"	"1258.75682"	"-2.18"	"-0.00137"	"7/70"	"7"	"70"	"4375892.2041626"	"HCD"	"MS2"	"80.14468"	"245.2"	"100.000"	"53.0572"	"16088"	"16088"	"16074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.5"	""	"370.0"	""	"367.7"	""	"331.1"	""	"422.0"	"468.7"	""	"747"	"10"	"35.000"	"28.000"	"3.95631266353718"	"21"	"0.0006037"	"0.004351"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDELTLAR"	"[R].vLDELTLAR.[AT]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFV3; Q6IFU8; Q6IFW5; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 12 OS=Rattus norvegicus OX=10116 GN=Krt12 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"629.88086"	"1258.75444"	"1258.75682"	"-1.89"	"-0.00119"	"5/70"	"5"	"70"	"4052951.87322998"	"HCD"	"MS2"	"41.38797"	"287.9"	"100.000"	"53.2417"	"16213"	"16213"	"16198"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"479.3"	""	"451.2"	""	"470.5"	""	"402.8"	"2.5"	"429.2"	"483.7"	""	"781"	"13"	"35.000"	"28.000"	"1.83493649410337"	"16"	"0.0001889"	"0.0008727"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLVAVDK"	"[R].vGLVAVDk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.3889"	"0.0000"	"1"	"1"	"1"	"420.27463"	"1258.80933"	"1258.81349"	"-3.31"	"-0.00139"	"8/56"	"8"	"56"	"5418116.25787354"	"HCD"	"MS2"	"63.17891"	"212.5"	"100.000"	"41.4074"	"11351"	"11351"	"11328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"318.5"	""	"302.5"	""	"247.6"	""	"387.0"	"0.0"	"374.1"	"382.4"	""	"301"	"18"	"31.000"	"24.000"	"0.214553942837129"	""	"0.003137"	"0.06331"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLVAVDK"	"[R].vGLVAVDk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"629.91022"	"1258.81316"	"1258.81349"	"-0.27"	"-0.00017"	"12/56"	"12"	"56"	"42426241.3300781"	"HCD"	"MS2"	"8.869824"	"587.2"	"21.120"	"41.5703"	"11462"	"11462"	"11447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1083.4"	""	"901.9"	""	"619.6"	""	"1063.0"	""	"930.3"	"952.9"	""	"309"	"36"	"31.000"	"24.000"	"0.00423573209562858"	""	"0.0006037"	"0.003827"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLVAVDK"	"[R].vGLVAVDk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"629.91028"	"1258.81328"	"1258.81349"	"-0.17"	"-0.00011"	"7/56"	"7"	"56"	"45134573.3845215"	"HCD"	"MS2"	"8.014338"	"638.5"	"20.719"	"41.4257"	"11358"	"11358"	"11341"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1129.0"	""	"959.1"	""	"679.2"	""	"1151.1"	""	"1052.4"	"1069.0"	""	"309"	"38"	"31.000"	"24.000"	"0.00261775190169112"	""	"0.0006037"	"0.004399"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLVAVDK"	"[R].vGLVAVDk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"629.91077"	"1258.81426"	"1258.81349"	"0.61"	"0.00038"	"7/56"	"7"	"56"	"7264658.68310547"	"HCD"	"MS2"	"31.09163"	"485.1"	"88.843"	"41.8893"	"11592"	"11592"	"11570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"732.5"	""	"697.5"	""	"665.8"	""	"728.8"	""	"889.9"	"886.6"	""	"290"	"32"	"31.000"	"24.000"	"0.00973571836742631"	""	"0.0005564"	"0.003607"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAGILTVK"	"[K].vAGILTVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"629.92804"	"1258.84880"	"1258.84988"	"-0.86"	"-0.00054"	"7/56"	"7"	"56"	"28088945.4163208"	"HCD"	"MS2"	"20.05382"	"1408.1"	"79.444"	"48.0621"	"14102"	"14102"	"14082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2446.8"	""	"2195.6"	""	"2105.7"	""	"1965.9"	""	"2231.1"	"2363.6"	""	"181"	"40"	"29.000"	"22.000"	"0.00100149452449979"	""	"0.0004166"	"0.002511"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAGILTVK"	"[K].vAGILTVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"629.92841"	"1258.84953"	"1258.84988"	"-0.27"	"-0.00017"	"11/56"	"11"	"56"	"20129537.5408936"	"HCD"	"MS2"	"27.36967"	"1228.9"	"93.115"	"47.7612"	"13931"	"13931"	"13912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2115.2"	""	"1868.3"	""	"1864.9"	""	"1711.4"	""	"1998.8"	"2065.0"	""	"181"	"36"	"29.000"	"22.000"	"0.00230488137858946"	""	"0.000523"	"0.002856"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGILTLK"	"[K].rGILTLk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"420.29144"	"1258.85978"	"1258.86111"	"-1.06"	"-0.00045"	"6/60"	"6"	"60"	"69798424.8756104"	"HCD"	"MS2"	"5.707516"	"1863.1"	"54.218"	"35.4579"	"8956"	"8956"	"8938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3198.6"	""	"3145.1"	""	"3018.3"	""	"2551.0"	""	"2525.7"	"3168.0"	""	"108"	"13"	"27.000"	"20.000"	"0.290665682558796"	"13"	"0.002651"	"0.03913"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGILTLK"	"[K].rGILTLk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"420.29156"	"1258.86014"	"1258.86111"	"-0.77"	"-0.00032"	"6/60"	"6"	"60"	"35182966.6418457"	"HCD"	"MS2"	"4.458743"	"356.4"	"18.326"	"35.7697"	"9084"	"9084"	"9065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"595.1"	""	"596.7"	""	"569.2"	""	"474.3"	""	"519.6"	"614.4"	""	"108"	"15"	"27.000"	"20.000"	"0.189406011934387"	"13"	"0.001686"	"0.02327"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGILTLK"	"[K].rGILTLk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"420.29163"	"1258.86032"	"1258.86111"	"-0.63"	"-0.00026"	"6/60"	"6"	"60"	"67921537.9360352"	"HCD"	"MS2"	"4.961553"	"3039.6"	"80.214"	"35.4095"	"8893"	"8893"	"8875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5097.7"	""	"5111.8"	""	"4905.8"	""	"4114.7"	""	"4268.6"	"5290.8"	""	"108"	"14"	"27.000"	"20.000"	"0.222020849396442"	"13"	"0.002829"	"0.0467"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGILTLK"	"[K].rGILTLk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"420.29166"	"1258.86042"	"1258.86111"	"-0.55"	"-0.00023"	"6/60"	"6"	"60"	"27510791.3041992"	"HCD"	"MS2"	"4.791729"	"454.4"	"30.712"	"35.7240"	"9022"	"9022"	"9003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"754.0"	""	"742.7"	""	"766.2"	""	"592.9"	""	"656.1"	"782.8"	""	"108"	"13"	"27.000"	"20.000"	"0.297436156058918"	"13"	"0.001058"	"0.01443"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNMLDAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"630.36920"	"1259.73113"	"1259.73431"	"-2.53"	"-0.00159"	"8/76"	"8"	"76"	"7623035.97198486"	"HCD"	"MS2"	"35.44944"	"353.2"	"100.000"	"57.4289"	"17908"	"17908"	"17877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"493.8"	""	"493.4"	""	"484.4"	""	"429.0"	""	"668.5"	"787.8"	""	"902"	"49"	"36.000"	"29.000"	"0.000593166399318699"	"27"	"0.0001308"	"0.0002828"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNMLDAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"630.37018"	"1259.73308"	"1259.73431"	"-0.98"	"-0.00061"	"12/76"	"12"	"76"	"9877441.82836914"	"HCD"	"MS2"	"26.68104"	"420.8"	"100.000"	"57.2484"	"17780"	"17780"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"585.0"	""	"592.7"	""	"551.8"	""	"498.0"	"3.4"	"805.4"	"956.6"	""	"908"	"45"	"36.000"	"29.000"	"0.00155616575092089"	"27"	"0.0001859"	"0.0003284"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNMLDAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"630.37061"	"1259.73393"	"1259.73431"	"-0.30"	"-0.00019"	"7/76"	"7"	"76"	"25657032.0915527"	"HCD"	"MS2"	"6.394532"	"285.1"	"27.467"	"57.7470"	"18038"	"18038"	"18021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"398.7"	""	"396.1"	""	"379.5"	""	"348.5"	""	"559.4"	"627.6"	""	"911"	"34"	"36.000"	"29.000"	"0.0184709137896739"	"22"	"0.0001889"	"0.0005941"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNMLDAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"630.37097"	"1259.73467"	"1259.73431"	"0.28"	"0.00018"	"12/76"	"12"	"76"	"21428434.4286499"	"HCD"	"MS2"	"3.265782"	"531.7"	"60.439"	"57.5412"	"17900"	"17900"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"712.2"	""	"716.2"	""	"689.2"	""	"612.3"	"2.8"	"1041.7"	"1275.0"	""	"906"	"43"	"36.000"	"29.000"	"0.00241600707655893"	"26"	"0.0001889"	"0.0005066"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIDLEIK"	"[KR].aIDLEIk.[GE]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	""	""	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"630.40186"	"1259.79643"	"1259.79751"	"-0.85"	"-0.00054"	"6/52"	"6"	"52"	"17332880.5598145"	"HCD"	"MS2"	"6.882842"	"398.9"	"28.924"	"49.9418"	"14866"	"14866"	"14846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"459.5"	""	"499.9"	""	"562.6"	""	"669.5"	"4.6"	"805.4"	"784.0"	""	"468"	"33"	"33.000"	"26.000"	"0.0123656188915392"	""	"0.0008731"	"0.009328"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLELK"	"[KR].aLDLELk.[GE]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"630.40186"	"1259.79643"	"1259.79751"	"-0.85"	"-0.00054"	"6/52"	"6"	"52"	"17332880.5598145"	"HCD"	"MS2"	"6.882842"	"398.9"	"28.924"	"49.9418"	"14866"	"14866"	"14846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"459.5"	""	"499.9"	""	"562.6"	""	"669.5"	"4.6"	"805.4"	"784.0"	""	"468"	"33"	"33.000"	"26.000"	"0.0123656188915392"	""	"0.0008731"	"0.009328"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIDLEIK"	"[KR].aIDLEIk.[GE]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	""	""	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"630.40198"	"1259.79668"	"1259.79751"	"-0.66"	"-0.00042"	"12/52"	"12"	"52"	"24356088.6386719"	"HCD"	"MS2"	"4.282714"	"397.1"	"20.503"	"49.6618"	"14705"	"14705"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"479.1"	""	"492.3"	""	"538.6"	""	"687.0"	""	"774.3"	"799.6"	""	"468"	"32"	"33.000"	"26.000"	"0.0146965655962316"	""	"0.00109"	"0.01476"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLELK"	"[KR].aLDLELk.[GE]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"630.40198"	"1259.79668"	"1259.79751"	"-0.66"	"-0.00042"	"12/52"	"12"	"52"	"24356088.6386719"	"HCD"	"MS2"	"4.282714"	"397.1"	"20.503"	"49.6618"	"14705"	"14705"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"479.1"	""	"492.3"	""	"538.6"	""	"687.0"	""	"774.3"	"799.6"	""	"468"	"32"	"33.000"	"26.000"	"0.0146965655962316"	""	"0.00109"	"0.01476"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQASALK"	"[R].aLQASALk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.3469"	"0.0000"	"1"	"1"	"1"	"630.40723"	"1259.80718"	"1259.80874"	"-1.24"	"-0.00078"	"7/66"	"7"	"66"	"13069519.5562744"	"HCD"	"MS2"	"0"	"867.7"	"100.000"	"35.9918"	"9176"	"9176"	"9145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1327.8"	""	"1162.7"	""	"1172.5"	""	"1309.5"	""	"1394.1"	"1859.7"	""	"370"	"49"	"32.000"	"25.000"	"0.000230765950134944"	""	"0.0003839"	"0.001722"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQASALK"	"[R].aLQASALk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.3214"	"0.0000"	"1"	"1"	"1"	"420.60739"	"1259.80762"	"1259.80874"	"-0.89"	"-0.00037"	"9/66"	"9"	"66"	"12507066.1096802"	"HCD"	"MS2"	"41.74264"	"535.3"	"89.490"	"36.0449"	"9154"	"9154"	"9130"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"763.9"	""	"742.6"	""	"742.1"	""	"781.2"	""	"857.5"	"1192.2"	""	"370"	"28"	"32.000"	"25.000"	"0.0289182313888577"	""	"0.0001889"	"0.0009364"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQASALK"	"[R].aLQASALk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.3617"	"0.0000"	"1"	"1"	"1"	"630.40747"	"1259.80766"	"1259.80874"	"-0.86"	"-0.00054"	"7/66"	"7"	"66"	"13278731.5734863"	"HCD"	"MS2"	"0"	"852.8"	"100.000"	"35.9232"	"9104"	"9104"	"9083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1312.1"	""	"1183.7"	""	"1093.7"	""	"1309.8"	"2.6"	"1345.7"	"1827.9"	""	"370"	"47"	"32.000"	"25.000"	"0.000354137346128901"	""	"0.0002277"	"0.001149"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQASALK"	"[R].aLQASALk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"420.60788"	"1259.80909"	"1259.80874"	"0.27"	"0.00011"	"9/66"	"9"	"66"	"11390933.1220703"	"HCD"	"MS2"	"28.82472"	"548.8"	"100.000"	"36.1340"	"9234"	"9234"	"9209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"822.1"	""	"746.4"	""	"780.6"	""	"788.0"	""	"874.7"	"1189.6"	""	"326"	"33"	"32.000"	"25.000"	"0.00753681064880793"	""	"0.0001889"	"0.000815"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLELLEK"	"[K].gLELLEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08836"	"Immunoglobulin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Igbp1 PE=2 SV=2"	"O08836"	"Immunoglobulin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Igbp1 PE=2 SV=2"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"3"	"420.60870"	"1259.81156"	"1259.79751"	"11.15"	"0.00468"	"4/54"	"4"	"54"	"854634.89630127"	"HCD"	"MS2"	"0"	"44.7"	"100.000"	"63.7803"	"20497"	"20497"	"20467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.8"	""	"64.0"	""	"59.6"	""	"76.9"	"0.6"	"67.8"	"82.7"	""	"326"	"15"	"32.000"	"25.000"	"0.577015665965998"	"20"	"0.005478"	"0.1751"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYFMAGSSR"	"[K].iYFMAGSSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.83282"	"1260.65837"	"1260.66081"	"-1.93"	"-0.00122"	"6/66"	"6"	"66"	"11054280.3659668"	"HCD"	"MS2"	"0"	"480.4"	"87.200"	"43.2185"	"12133"	"12133"	"12116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"825.9"	""	"825.4"	""	"839.6"	""	"452.4"	"8.4"	"768.5"	"818.5"	""	"614"	"37"	"34.000"	"27.000"	"0.00611136715069066"	"15"	"0.0001889"	"0.0004833"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYFMAGSSR"	"[K].iYFMAGSSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.83289"	"1260.65849"	"1260.66081"	"-1.84"	"-0.00116"	"6/66"	"6"	"66"	"11727839.9796753"	"HCD"	"MS2"	"0"	"459.6"	"72.096"	"43.0011"	"11998"	"11998"	"11989"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"777.0"	""	"833.7"	""	"801.7"	""	"428.9"	"1.4"	"731.5"	"767.7"	""	"618"	"37"	"34.000"	"27.000"	"0.00574061576623335"	"15"	"0.0001889"	"0.0007065"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIEMEQR"	"[K].lLIEMEQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"630.86298"	"1260.71868"	"1260.71832"	"0.28"	"0.00018"	"6/62"	"6"	"62"	"4155111.6361084"	"HCD"	"MS2"	"44.05184"	"319.4"	"100.000"	"47.3476"	"13762"	"13762"	"13736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.5"	""	"444.3"	""	"448.6"	""	"467.1"	"28.4"	"639.4"	"600.9"	""	"872"	"26"	"36.000"	"29.000"	"0.1092663634322"	"22"	"0.0002277"	"0.001319"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVFSLLPR"	"[K].eAVFSLLPR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5NDL0"	"EGF domain-specific O-linked N-acetylglucosamine transferase OS=Rattus norvegicus OX=10116 GN=Eogt PE=2 SV=1"	"Q5NDL0"	"EGF domain-specific O-linked N-acetylglucosamine transferase OS=Rattus norvegicus OX=10116 GN=Eogt PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"630.87994"	"1260.75261"	"1260.75134"	"1.01"	"0.00064"	"7/72"	"7"	"72"	"2357251.77679443"	"HCD"	"MS2"	"44.0922"	"113.1"	"100.000"	"59.6022"	"18737"	"18737"	"18713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.6"	""	"166.4"	""	"175.0"	""	"173.4"	""	"180.8"	"190.5"	""	"660"	"21"	"35.000"	"28.000"	"0.277021795551401"	"17"	"0.0001859"	"0.0003489"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTNNLK"	"[K].nVTNNLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"630.88647"	"1260.76567"	"1260.76761"	"-1.53"	"-0.00097"	"6/60"	"6"	"60"	"3744250.51525879"	"HCD"	"MS2"	"0"	"304.1"	"100.000"	"29.9870"	"6727"	"6727"	"6697"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"347.7"	""	"380.9"	""	"430.8"	""	"547.0"	""	"581.1"	"598.2"	""	"555"	"32"	"34.000"	"27.000"	"0.0161533642931417"	""	"0.0004557"	"0.002572"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTNNLK"	"[K].nVTNNLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"630.88770"	"1260.76811"	"1260.76761"	"0.40"	"0.00025"	"6/60"	"6"	"60"	"3680645.96014404"	"HCD"	"MS2"	"16.21343"	"316.6"	"100.000"	"29.8945"	"6648"	"6648"	"6618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.7"	""	"380.1"	""	"443.4"	""	"576.7"	""	"630.3"	"626.8"	""	"630"	"31"	"34.000"	"27.000"	"0.0262609573155185"	""	"0.0004166"	"0.002425"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSTPILK"	"[K].sGSTPILk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"630.89972"	"1260.79216"	"1260.79276"	"-0.47"	"-0.00030"	"6/62"	"6"	"62"	"2317577.27496338"	"HCD"	"MS2"	"0"	"190.4"	"100.000"	"33.5135"	"8165"	"8165"	"8145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.6"	""	"255.9"	""	"259.0"	""	"320.3"	""	"364.8"	"355.5"	""	"533"	"23"	"34.000"	"27.000"	"0.141806851094601"	"23"	"0.0001889"	"0.0007794"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSTPILK"	"[K].sGSTPILk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"630.89978"	"1260.79228"	"1260.79276"	"-0.38"	"-0.00024"	"12/62"	"12"	"62"	"2242609.94732666"	"HCD"	"MS2"	"0"	"180.8"	"100.000"	"33.4538"	"8097"	"8097"	"8084"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.4"	""	"230.2"	""	"254.1"	""	"319.6"	""	"331.6"	"351.4"	""	"533"	"23"	"34.000"	"27.000"	"0.125515457484788"	"20"	"0.0001889"	"0.0006824"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISDINK"	"[R].lISDINk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"630.90051"	"1260.79375"	"1260.79276"	"0.79"	"0.00050"	"6/52"	"6"	"52"	"9865579.36566162"	"HCD"	"MS2"	"16.4179"	"558.5"	"70.287"	"40.9743"	"11174"	"11174"	"11157"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"718.5"	""	"751.2"	""	"693.0"	""	"810.7"	""	"1085.6"	"1249.2"	""	"437"	"31"	"33.000"	"26.000"	"0.0172365935699654"	""	"0.00109"	"0.01487"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISDINK"	"[R].lISDINk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"630.90051"	"1260.79375"	"1260.79276"	"0.79"	"0.00050"	"6/52"	"6"	"52"	"13906582.7961426"	"HCD"	"MS2"	"17.99296"	"752.3"	"69.040"	"41.1305"	"11281"	"11281"	"11261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"965.9"	""	"1024.7"	""	"910.1"	""	"1104.9"	"1.5"	"1430.0"	"1703.7"	""	"437"	"31"	"33.000"	"26.000"	"0.0163475035861687"	""	"0.00119"	"0.01582"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVVATK"	"[R].vWVVATk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"630.90698"	"1260.80669"	"1260.80801"	"-1.05"	"-0.00066"	"6/48"	"6"	"48"	"5820087.46026611"	"HCD"	"MS2"	"0"	"392.3"	"100.000"	"45.9819"	"13203"	"13203"	"13181"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.9"	""	"599.7"	""	"634.4"	""	"608.1"	""	"615.5"	"676.2"	""	"402"	"37"	"33.000"	"26.000"	"0.00369144207013018"	"25"	"0.0004166"	"0.002446"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLQGPK"	"[R].lFLQGPk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"630.90704"	"1260.80681"	"1260.80801"	"-0.96"	"-0.00060"	"6/56"	"6"	"56"	"2664861.87988281"	"HCD"	"MS2"	"17.51491"	"259.0"	"100.000"	"47.0318"	"13633"	"13633"	"13608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.2"	""	"322.0"	""	"335.3"	""	"447.9"	"0.5"	"486.9"	"490.5"	""	"402"	"31"	"33.000"	"26.000"	"0.0177908237575998"	"23"	"0.0006037"	"0.004517"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVVATK"	"[R].vWVVATk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"630.90747"	"1260.80766"	"1260.80801"	"-0.28"	"-0.00018"	"6/48"	"6"	"48"	"6163263.95935059"	"HCD"	"MS2"	"0"	"424.9"	"95.580"	"46.2299"	"13353"	"13353"	"13328"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"645.3"	""	"686.6"	""	"669.2"	""	"620.5"	""	"679.9"	"721.5"	""	"402"	"37"	"33.000"	"26.000"	"0.0036999517229526"	"25"	"0.000494"	"0.002671"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLQGPK"	"[R].lFLQGPk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"630.90759"	"1260.80791"	"1260.80801"	"-0.08"	"-0.00005"	"6/56"	"6"	"56"	"3274869.69970703"	"HCD"	"MS2"	"21.87624"	"282.6"	"100.000"	"47.2426"	"13767"	"13767"	"13746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"405.5"	""	"361.1"	""	"378.8"	""	"448.1"	"3.7"	"543.7"	"537.9"	""	"402"	"35"	"33.000"	"26.000"	"0.00668645702120949"	"26"	"0.0003839"	"0.001762"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWFTMER"	"[R].yWFTMER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O54715"	"V-type proton ATPase subunit S1 OS=Rattus norvegicus OX=10116 GN=Atp6ap1 PE=2 SV=1"	"O54715"	"V-type proton ATPase subunit S1 OS=Rattus norvegicus OX=10116 GN=Atp6ap1 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"631.31512"	"1261.62297"	"1261.62370"	"-0.57"	"-0.00036"	"5/52"	"5"	"52"	"3362620.86956787"	"HCD"	"MS2"	"47.29449"	"230.3"	"100.000"	"53.0052"	"16117"	"16117"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.2"	""	"306.5"	""	"317.6"	""	"373.5"	""	"442.3"	"466.6"	""	"448"	"4"	"33.000"	"26.000"	"9.3378741897355"	"14"	"0.003197"	"0.06537"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSGIDFK"	"[K].hSGIDFk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"421.24796"	"1261.72931"	"1261.73049"	"-0.94"	"-0.00039"	"7/54"	"7"	"54"	"5544780.78863525"	"HCD"	"MS2"	"39.84476"	"289.1"	"67.042"	"29.9266"	"6661"	"6661"	"6634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.6"	""	"390.4"	""	"408.9"	""	"474.9"	"4.1"	"554.9"	"528.5"	""	"848"	"12"	"36.000"	"29.000"	"2.84685833640604"	"22"	"0.002265"	"0.033"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSGIDFK"	"[K].hSGIDFk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.1000"	"0.0000"	"1"	"1"	"1"	"421.24799"	"1261.72940"	"1261.73049"	"-0.86"	"-0.00036"	"7/54"	"7"	"54"	"6997188.3984375"	"HCD"	"MS2"	"49.39596"	"286.3"	"54.734"	"29.9778"	"6723"	"6723"	"6697"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.2"	""	"375.0"	""	"433.2"	""	"464.6"	""	"530.2"	"541.0"	""	"849"	"10"	"36.000"	"29.000"	"3.92534374836775"	"22"	"0.0004557"	"0.002624"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEGNALLR"	"[R].lFEGNALLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"631.37689"	"1261.74651"	"1261.74659"	"-0.06"	"-0.00004"	"7/72"	"7"	"72"	"9435481.54412842"	"HCD"	"MS2"	"18.51769"	"445.4"	"100.000"	"52.3466"	"15797"	"15797"	"15778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"587.3"	""	"617.4"	""	"642.8"	""	"764.9"	"2.8"	"801.7"	"801.7"	""	"703"	"32"	"35.000"	"28.000"	"0.0217232764648653"	"26"	"0.0001889"	"0.0005278"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEGNALLR"	"[R].lFEGNALLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"631.37695"	"1261.74663"	"1261.74659"	"0.03"	"0.00002"	"7/72"	"7"	"72"	"9782113.82232666"	"HCD"	"MS2"	"20.04454"	"465.0"	"100.000"	"52.5472"	"15929"	"15929"	"15910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"622.5"	""	"646.5"	""	"710.9"	""	"771.2"	"6.9"	"829.9"	"815.6"	""	"703"	"32"	"35.000"	"28.000"	"0.0218738550236959"	"26"	"0.0001889"	"0.0005595"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASWIAQK"	"[R].aSWIAQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q01460"	"Di-N-acetylchitobiase OS=Rattus norvegicus OX=10116 GN=Ctbs PE=1 SV=1"	"Q01460"	"Di-N-acetylchitobiase OS=Rattus norvegicus OX=10116 GN=Ctbs PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"631.38739"	"1261.76750"	"1261.76688"	"0.50"	"0.00031"	"6/50"	"6"	"50"	"4730229.02386475"	"HCD"	"MS2"	"31.72752"	"422.4"	"100.000"	"38.8025"	"10286"	"10286"	"10262"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"634.8"	""	"574.3"	""	"608.1"	""	"586.4"	"1.4"	"781.7"	"815.4"	""	"599"	"30"	"34.000"	"27.000"	"0.0296754167495384"	"25"	"0.000523"	"0.003241"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGIGAYLVR"	"[R].aIGIGAYLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.39478"	"1261.78227"	"1261.78297"	"-0.55"	"-0.00035"	"8/74"	"8"	"74"	"3888881.63366699"	"HCD"	"MS2"	"12.27532"	"231.5"	"100.000"	"52.9585"	"16048"	"16048"	"16018"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"305.9"	""	"327.6"	""	"350.4"	""	"369.0"	"0.8"	"409.3"	"429.8"	""	"497"	"18"	"33.000"	"26.000"	"0.385768171974583"	"14"	"0.0007444"	"0.007213"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGIGAYLVR"	"[R].aIGIGAYLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"631.39594"	"1261.78459"	"1261.78297"	"1.28"	"0.00081"	"8/74"	"8"	"74"	"4547336.04510498"	"HCD"	"MS2"	"15.22439"	"266.9"	"100.000"	"53.1158"	"16162"	"16162"	"16134"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"352.3"	""	"355.7"	""	"408.3"	""	"443.3"	""	"463.1"	"505.3"	""	"466"	"36"	"33.000"	"26.000"	"0.00577239339428555"	"17"	"0"	"0.0001346"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSLGAGAK"	"[R].tVSLGAGAk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"631.39685"	"1261.78642"	"1261.78801"	"-1.25"	"-0.00079"	"8/68"	"8"	"68"	"1644534.44335938"	"HCD"	"MS2"	"0"	"151.0"	"100.000"	"33.3692"	"8108"	"8108"	"8089"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.1"	""	"179.7"	""	"201.0"	""	"289.0"	""	"281.5"	"286.4"	""	"459"	"25"	"33.000"	"26.000"	"0.0660362936181836"	"22"	"0.0001308"	"0.0002385"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIFPAK"	"[K].iDIFPAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"631.39844"	"1261.78960"	"1261.79203"	"-1.93"	"-0.00122"	"7/48"	"7"	"48"	"2723533.91186523"	"HCD"	"MS2"	"38.35381"	"163.3"	"100.000"	"53.3309"	"16191"	"16191"	"16178"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.3"	""	"217.5"	""	"247.6"	""	"247.6"	""	"290.4"	"318.1"	""	"406"	"9"	"33.000"	"26.000"	"2.82160384136311"	"19"	"0.004695"	"0.1362"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEVPIAK"	"[R].fEVPIAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ERR2"	"COMM domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Commd5 PE=2 SV=1"	"Q9ERR2"	"COMM domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Commd5 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.39929"	"1261.79131"	"1261.79203"	"-0.57"	"-0.00036"	"6/48"	"6"	"48"	"4456642.55230713"	"HCD"	"MS2"	"18.7655"	"314.2"	"100.000"	"49.3272"	"14620"	"14620"	"14590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"431.2"	""	"425.3"	""	"451.2"	""	"516.3"	""	"573.4"	"582.8"	""	"404"	"19"	"33.000"	"26.000"	"0.235695542646315"	"14"	"0.0008731"	"0.008698"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDFIAK"	"[R].lPDFIAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54861"	"Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3"	"O54861"	"Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"631.39935"	"1261.79143"	"1261.79203"	"-0.48"	"-0.00030"	"6/48"	"6"	"48"	"7383300.48974609"	"HCD"	"MS2"	"3.648879"	"412.6"	"100.000"	"56.2162"	"17358"	"17358"	"17339"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"443.4"	""	"469.6"	""	"526.2"	""	"698.0"	"0.7"	"869.0"	"914.6"	""	"404"	"23"	"33.000"	"26.000"	"0.102884835953554"	"20"	"0.0006037"	"0.004733"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDFIAK"	"[R].lPDFIAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54861"	"Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3"	"O54861"	"Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"631.39960"	"1261.79192"	"1261.79203"	"-0.09"	"-0.00006"	"6/48"	"6"	"48"	"6765575.11816406"	"HCD"	"MS2"	"8.390614"	"396.6"	"100.000"	"56.3803"	"17479"	"17479"	"17461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"478.9"	""	"457.9"	""	"488.5"	""	"693.1"	""	"804.6"	"844.3"	""	"404"	"23"	"33.000"	"26.000"	"0.103597999566256"	"20"	"0.0006037"	"0.005531"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEVPIAK"	"[R].fEVPIAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ERR2"	"COMM domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Commd5 PE=2 SV=1"	"Q9ERR2"	"COMM domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Commd5 PE=2 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"631.39960"	"1261.79192"	"1261.79203"	"-0.09"	"-0.00006"	"5/48"	"5"	"48"	"4546779.10974121"	"HCD"	"MS2"	"3.914891"	"320.3"	"100.000"	"49.0361"	"14453"	"14453"	"14431"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"465.4"	""	"416.8"	""	"459.2"	""	"503.8"	""	"590.6"	"600.2"	""	"404"	"21"	"33.000"	"26.000"	"0.178793353185829"	"15"	"0.0008125"	"0.007527"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDFIAK"	"[R].lPDFIAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54861"	"Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3"	"O54861"	"Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"631.40002"	"1261.79277"	"1261.79203"	"0.59"	"0.00037"	"5/48"	"5"	"48"	"1563325.10351563"	"HCD"	"MS2"	"19.44534"	"112.4"	"100.000"	"56.7193"	"17618"	"17618"	"17589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.1"	""	"140.0"	""	"149.3"	""	"178.7"	"1.8"	"240.0"	"216.1"	""	"408"	"28"	"33.000"	"26.000"	"0.0361102227496754"	"15"	"0.001058"	"0.01383"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDLLADSR"	"[K].lMDLLADSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"631.85193"	"1262.69658"	"1262.69759"	"-0.80"	"-0.00050"	"7/74"	"7"	"74"	"3482896.75488281"	"HCD"	"MS2"	"8.736234"	"140.1"	"100.000"	"61.3300"	"19496"	"19496"	"19475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.3"	""	"194.0"	""	"211.1"	""	"177.2"	"4.4"	"240.4"	"267.2"	""	"888"	"36"	"36.000"	"29.000"	"0.0113863091221387"	"24"	"0.0001859"	"0.0003157"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDLLADSR"	"[K].lMDLLADSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"631.85193"	"1262.69658"	"1262.69759"	"-0.80"	"-0.00050"	"7/74"	"7"	"74"	"3180667.1741333"	"HCD"	"MS2"	"25.21331"	"125.5"	"100.000"	"61.1990"	"19389"	"19389"	"19369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.1"	""	"184.1"	""	"176.1"	""	"165.8"	""	"220.3"	"252.1"	""	"888"	"27"	"36.000"	"29.000"	"0.0940552344050334"	"23"	"0.0003839"	"0.002071"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDMTSVIR"	"[K].vLDMTSVIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"631.86993"	"1262.73259"	"1262.73397"	"-1.09"	"-0.00069"	"8/70"	"8"	"70"	"2694653.61352539"	"HCD"	"MS2"	"0"	"194.9"	"100.000"	"53.3356"	"16249"	"16249"	"16242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"271.6"	""	"305.8"	""	"260.8"	""	"294.4"	"0.1"	"345.5"	"367.9"	""	"777"	"18"	"35.000"	"28.000"	"0.558973247652396"	"18"	"0.0001889"	"0.0003995"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDMTSVIR"	"[K].vLDMTSVIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"631.87024"	"1262.73320"	"1262.73397"	"-0.61"	"-0.00039"	"7/70"	"7"	"70"	"4541141.63476563"	"HCD"	"MS2"	"28.82119"	"273.8"	"100.000"	"53.0914"	"16101"	"16101"	"16087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.8"	""	"413.2"	""	"389.1"	""	"401.1"	""	"494.5"	"522.1"	""	"792"	"24"	"35.000"	"28.000"	"0.163943871228613"	"17"	"0.0001889"	"0.0006216"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"631.87030"	"1262.73332"	"1262.73564"	"-1.83"	"-0.00116"	"6/56"	"6"	"56"	"5963063.87988281"	"HCD"	"MS2"	"0"	"491.8"	"100.000"	"28.8937"	"6245"	"6245"	"6230"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"904.2"	""	"707.6"	""	"585.4"	""	"738.3"	""	"899.9"	"819.7"	""	"792"	"33"	"35.000"	"28.000"	"0.0181424187138955"	""	"0.0005564"	"0.003356"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"631.87079"	"1262.73430"	"1262.73564"	"-1.06"	"-0.00067"	"12/56"	"12"	"56"	"7231440.56396484"	"HCD"	"MS2"	"0"	"580.8"	"100.000"	"28.9784"	"6319"	"6319"	"6304"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1060.8"	""	"789.8"	""	"709.3"	""	"849.5"	"1.1"	"1124.0"	"964.1"	""	"753"	"37"	"35.000"	"28.000"	"0.00808658173510146"	""	"0.000523"	"0.002966"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"631.87091"	"1262.73454"	"1262.73564"	"-0.87"	"-0.00055"	"12/56"	"12"	"56"	"1290032.69659424"	"HCD"	"MS2"	"0"	"118.4"	"100.000"	"29.2740"	"6435"	"6435"	"6413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.3"	""	"160.0"	""	"147.6"	""	"181.4"	"0.9"	"228.8"	"199.2"	""	"753"	"38"	"35.000"	"28.000"	"0.00606408081644619"	""	"0.0002277"	"0.001125"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"631.87103"	"1262.73479"	"1262.73564"	"-0.67"	"-0.00042"	"6/56"	"6"	"56"	"1471066.66546631"	"HCD"	"MS2"	"0"	"140.0"	"100.000"	"29.1793"	"6355"	"6355"	"6337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"248.7"	""	"188.8"	""	"181.0"	""	"182.6"	"1.4"	"262.1"	"261.6"	""	"753"	"33"	"35.000"	"28.000"	"0.0195778492694869"	""	"0.0001889"	"0.0009821"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEMLNK"	"[R].gIEMLNk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"631.88025"	"1262.75322"	"1262.75426"	"-0.83"	"-0.00052"	"6/50"	"6"	"50"	"17169495.0462646"	"HCD"	"MS2"	"23.48884"	"1301.0"	"89.254"	"40.9356"	"11201"	"11201"	"11181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2359.9"	""	"2157.2"	""	"1493.7"	""	"1721.1"	""	"2236.1"	"2341.7"	""	"703"	"29"	"35.000"	"28.000"	"0.0438455305256394"	"25"	"0.0008125"	"0.007507"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMLLANK"	"[R].dMLLANk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"0.4595"	"0.0000"	"1"	"1"	"1"	"631.88055"	"1262.75383"	"1262.75426"	"-0.34"	"-0.00022"	"6/50"	"6"	"50"	"9891909.66516113"	"HCD"	"MS2"	"17.52543"	"739.5"	"100.000"	"40.6185"	"11071"	"11071"	"11053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1117.8"	""	"1069.3"	""	"1150.8"	""	"835.9"	""	"1426.3"	"1414.0"	""	"703"	"37"	"35.000"	"28.000"	"0.00650017919570794"	""	"0.0007076"	"0.006968"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEMLNK"	"[R].gIEMLNk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"631.88080"	"1262.75432"	"1262.75426"	"0.04"	"0.00003"	"6/50"	"6"	"50"	"18339863.1494751"	"HCD"	"MS2"	"6.214293"	"1020.4"	"67.792"	"40.7794"	"11094"	"11094"	"11077"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1819.5"	""	"1746.1"	""	"1172.0"	""	"1351.1"	"6.0"	"1736.3"	"1822.8"	""	"701"	"29"	"35.000"	"28.000"	"0.040708773915104"	"25"	"0.0008453"	"0.007984"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMLLANK"	"[R].dMLLANk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"0.4865"	"0.0000"	"1"	"1"	"1"	"631.88098"	"1262.75469"	"1262.75426"	"0.33"	"0.00021"	"6/50"	"6"	"50"	"10043275.4119263"	"HCD"	"MS2"	"12.93802"	"723.5"	"97.357"	"40.4719"	"10967"	"10967"	"10949"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1065.8"	""	"1048.7"	""	"1121.7"	""	"848.7"	""	"1376.1"	"1400.4"	""	"699"	"37"	"35.000"	"28.000"	"0.006674937138689"	""	"0.0006037"	"0.003972"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLTSEK"	"[K].qVLTSEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"631.88879"	"1262.77031"	"1262.77202"	"-1.36"	"-0.00086"	"6/64"	"6"	"64"	"3055899.11474609"	"HCD"	"MS2"	"0"	"237.4"	"100.000"	"30.6698"	"7007"	"7007"	"6976"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"416.5"	""	"304.5"	""	"237.1"	""	"437.7"	""	"433.9"	"423.7"	""	"583"	"32"	"34.000"	"27.000"	"0.0189076937379312"	"26"	"0.0003839"	"0.00197"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLTSEK"	"[K].qVLTSEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"631.88910"	"1262.77092"	"1262.77202"	"-0.87"	"-0.00055"	"10/64"	"10"	"64"	"2418326.19470215"	"HCD"	"MS2"	"0"	"190.4"	"100.000"	"30.6170"	"6944"	"6944"	"6920"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"325.2"	""	"243.2"	""	"182.7"	""	"364.3"	""	"348.2"	"344.2"	""	"564"	"25"	"34.000"	"27.000"	"0.0830326900731251"	"26"	"0.0003839"	"0.001862"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"631.88916"	"1262.77104"	"1262.77202"	"-0.78"	"-0.00049"	"10/62"	"10"	"62"	"15102495.2097778"	"HCD"	"MS2"	"13.84277"	"1085.8"	"100.000"	"27.9689"	"5903"	"5903"	"5884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1388.3"	""	"1388.6"	""	"1379.6"	""	"1839.9"	"2.7"	"2162.1"	"2141.2"	""	"564"	"24"	"34.000"	"27.000"	"0.109206655867896"	"24"	"0.0003839"	"0.001859"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"631.88916"	"1262.77104"	"1262.77202"	"-0.78"	"-0.00049"	"10/62"	"10"	"62"	"18911848.1008911"	"HCD"	"MS2"	"2.513363"	"1259.7"	"100.000"	"28.0554"	"5973"	"5973"	"5953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1645.0"	""	"1572.6"	""	"1590.1"	""	"2137.3"	""	"2484.9"	"2527.9"	""	"564"	"24"	"34.000"	"27.000"	"0.10845488253679"	"24"	"0.0004166"	"0.002289"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDK"	"[K].iTITNDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"P63018; P0DMW0; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"631.88916"	"1262.77104"	"1262.77202"	"-0.78"	"-0.00049"	"12/60"	"12"	"60"	"30608677.4087524"	"HCD"	"MS2"	"4.752831"	"1479.1"	"67.136"	"35.4281"	"8944"	"8944"	"8922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2272.7"	""	"1853.1"	""	"1945.9"	""	"2579.5"	""	"2672.7"	"2685.8"	""	"564"	"30"	"34.000"	"27.000"	"0.026868851825467"	""	"0.00103"	"0.01289"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDK"	"[K].iTITNDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"P63018; P0DMW0; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"631.88959"	"1262.77190"	"1262.77202"	"-0.10"	"-0.00006"	"12/60"	"12"	"60"	"28141624.262085"	"HCD"	"MS2"	"5.056453"	"1696.2"	"79.320"	"35.3756"	"8879"	"8879"	"8859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2575.8"	""	"2088.3"	""	"2245.3"	""	"2984.9"	""	"3067.8"	"3109.3"	""	"556"	"30"	"34.000"	"27.000"	"0.0270423728209996"	""	"0.001217"	"0.01677"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"631.89008"	"1262.77287"	"1262.77202"	"0.67"	"0.00043"	"7/62"	"7"	"62"	"1339878.15637207"	"HCD"	"MS2"	"0"	"113.7"	"100.000"	"28.2875"	"6033"	"6033"	"6008"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.9"	""	"138.8"	""	"147.9"	""	"181.7"	"1.0"	"232.6"	"234.6"	""	"484"	"24"	"33.000"	"26.000"	"0.0860627790936945"	"23"	"0.0001889"	"0.0005064"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILNPYK"	"[K].gILNPYk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"631.89648"	"1262.78569"	"1262.78728"	"-1.26"	"-0.00079"	"8/56"	"8"	"56"	"5563631.14904785"	"HCD"	"MS2"	"0"	"432.2"	"100.000"	"39.8243"	"10706"	"10706"	"10677"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"581.5"	""	"579.1"	""	"624.5"	""	"743.3"	""	"797.8"	"771.2"	""	"443"	"6"	"33.000"	"26.000"	"5.2768376246295"	"17"	"0.00103"	"0.01167"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPGVFTR"	"[R].kPGVFTR.[V]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P32038"	"Complement factor D OS=Rattus norvegicus OX=10116 GN=Cfd PE=1 SV=2"	"P32038"	"Complement factor D OS=Rattus norvegicus OX=10116 GN=Cfd PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"421.60342"	"1262.79572"	"1262.79851"	"-2.21"	"-0.00093"	"8/60"	"8"	"60"	"4108359.65710449"	"HCD"	"MS2"	"30.34727"	"347.4"	"100.000"	"28.8456"	"6267"	"6267"	"6262"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"509.1"	""	"505.9"	""	"437.0"	""	"626.9"	""	"607.9"	"603.0"	""	"371"	"4"	"32.000"	"25.000"	"6.78178338442346"	"13"	"0.0009727"	"0.01076"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFIVAAK"	"[R].gVFIVAAk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"631.91528"	"1262.82329"	"1262.82366"	"-0.30"	"-0.00019"	"11/58"	"11"	"58"	"9109965.00994873"	"HCD"	"MS2"	"11.3187"	"614.0"	"100.000"	"46.1653"	"13278"	"13278"	"13260"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1048.2"	""	"941.1"	""	"960.0"	""	"910.8"	"8.2"	"1002.8"	"930.3"	""	"137"	"31"	"28.000"	"21.000"	"0.00511317399510895"	"21"	"0.0003839"	"0.002097"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWGWDGK"	"[K].gWGWDGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"632.34802"	"1263.68877"	"1263.68863"	"0.11"	"0.00007"	"6/48"	"6"	"48"	"4935562.49829102"	"HCD"	"MS2"	"28.87976"	"425.0"	"100.000"	"44.3255"	"12581"	"12581"	"12556"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"394.2"	""	"422.8"	""	"469.9"	""	"882.6"	""	"940.4"	"938.1"	""	"778"	"20"	"35.000"	"28.000"	"0.36303592301003"	"25"	"0.000523"	"0.003001"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWGWDGK"	"[K].gWGWDGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"632.34912"	"1263.69097"	"1263.68863"	"1.85"	"0.00117"	"5/48"	"5"	"48"	"6014334.36749268"	"HCD"	"MS2"	"12.10987"	"551.9"	"100.000"	"44.1168"	"12446"	"12446"	"12422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"527.7"	""	"500.1"	""	"589.0"	""	"1196.8"	"2.9"	"1213.2"	"1221.3"	""	"777"	"26"	"35.000"	"28.000"	"0.10289423038487"	"21"	"0.0006037"	"0.00561"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMADLK"	"[R].dLMADLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.3235"	"0.0000"	"1"	"1"	"1"	"632.37250"	"1263.73772"	"1263.73828"	"-0.44"	"-0.00028"	"12/56"	"12"	"56"	"8406037.42279053"	"HCD"	"MS2"	"11.55981"	"684.1"	"100.000"	"48.3047"	"14201"	"14201"	"14186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1053.5"	""	"1035.6"	""	"1050.9"	""	"829.9"	""	"1239.9"	"1270.2"	""	"744"	"34"	"35.000"	"28.000"	"0.0163133419572295"	""	"0.000523"	"0.002862"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNILTAFR"	"[R].sLNILTAFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"632.38464"	"1263.76201"	"1263.76224"	"-0.18"	"-0.00011"	"7/86"	"7"	"86"	"11736128.1026001"	"HCD"	"MS2"	"2.892622"	"464.7"	"100.000"	"62.6828"	"19995"	"19995"	"19977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"624.3"	""	"632.2"	""	"703.8"	""	"861.2"	""	"732.1"	"846.4"	""	"530"	"43"	"34.000"	"27.000"	"0.00144959230166903"	"27"	"0.0001889"	"0.0004209"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNILTAFR"	"[R].sLNILTAFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"632.38464"	"1263.76201"	"1263.76224"	"-0.18"	"-0.00011"	"7/86"	"7"	"86"	"12273242.9769897"	"HCD"	"MS2"	"1.904101"	"487.8"	"100.000"	"62.7690"	"20084"	"20084"	"20067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"645.3"	""	"652.4"	""	"738.4"	""	"949.0"	""	"728.0"	"901.9"	""	"530"	"44"	"34.000"	"27.000"	"0.00096659795935286"	""	"0.0001889"	"0.0003761"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFGLDIK"	"[R].lFGLDIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88994"	"Mitochondrial amidoxime reducing component 2 OS=Rattus norvegicus OX=10116 GN=Marc2 PE=2 SV=1"	"O88994"	"Mitochondrial amidoxime reducing component 2 OS=Rattus norvegicus OX=10116 GN=Marc2 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"632.40741"	"1263.80754"	"1263.80768"	"-0.11"	"-0.00007"	"6/48"	"6"	"48"	"3986397.25146484"	"HCD"	"MS2"	"38.9384"	"233.5"	"100.000"	"64.1785"	"20606"	"20606"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.7"	""	"331.6"	"2.5"	"335.8"	""	"395.8"	"0.8"	"418.9"	"481.9"	""	"173"	"30"	"29.000"	"22.000"	"0.00868992658590812"	""	"0.000523"	"0.002863"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WISIMTER"	"[K].wISIMTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.84937"	"1264.69145"	"1264.69211"	"-0.52"	"-0.00033"	"6/64"	"6"	"64"	"12456071.0686035"	"HCD"	"MS2"	"11.83251"	"556.2"	"85.830"	"55.6461"	"17179"	"17179"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"806.6"	""	"855.5"	""	"858.2"	""	"801.8"	"0.3"	"866.2"	"1073.5"	""	"840"	"26"	"36.000"	"29.000"	"0.0989120699236323"	"14"	"0.0003571"	"0.001519"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WISIMTER"	"[K].wISIMTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"632.84949"	"1264.69170"	"1264.69211"	"-0.33"	"-0.00021"	"6/64"	"6"	"64"	"23022599.4158936"	"HCD"	"MS2"	"0"	"551.5"	"51.031"	"55.3241"	"17047"	"17047"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"725.1"	""	"830.1"	""	"862.0"	""	"764.8"	"3.2"	"934.6"	"1103.7"	""	"840"	"35"	"36.000"	"29.000"	"0.0141987231206512"	"18"	"0.0004166"	"0.002384"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WISIMTER"	"[K].wISIMTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"632.84955"	"1264.69182"	"1264.69211"	"-0.23"	"-0.00014"	"6/64"	"6"	"64"	"9811607.06225586"	"HCD"	"MS2"	"25.69401"	"500.9"	"100.000"	"55.0118"	"16919"	"16919"	"16901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"719.4"	""	"770.7"	""	"773.0"	""	"721.7"	""	"803.6"	"953.2"	""	"840"	"34"	"36.000"	"29.000"	"0.0180405299241252"	"16"	"0.0001889"	"0.001096"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WISIMTER"	"[K].wISIMTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.84955"	"1264.69182"	"1264.69211"	"-0.23"	"-0.00014"	"6/64"	"6"	"64"	"13395462.6461182"	"HCD"	"MS2"	"19.16833"	"564.3"	"78.456"	"55.4751"	"17055"	"17055"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"870.6"	""	"902.2"	""	"903.1"	""	"782.1"	"1.8"	"859.9"	"1014.8"	""	"840"	"21"	"36.000"	"29.000"	"0.305667517905466"	"14"	"0.0003839"	"0.001883"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WISIMTER"	"[K].wISIMTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"632.84961"	"1264.69194"	"1264.69211"	"-0.13"	"-0.00008"	"6/64"	"6"	"64"	"10460807.1895752"	"HCD"	"MS2"	"16.47779"	"547.5"	"100.000"	"54.8428"	"16797"	"16797"	"16780"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"753.1"	""	"868.8"	""	"854.7"	""	"782.7"	""	"888.2"	"1037.6"	""	"840"	"32"	"36.000"	"29.000"	"0.0283954849664632"	"16"	"0.0003839"	"0.001638"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WISIMTER"	"[K].wISIMTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"632.84967"	"1264.69206"	"1264.69211"	"-0.04"	"-0.00002"	"6/64"	"6"	"64"	"23030291.9547119"	"HCD"	"MS2"	"1.506463"	"613.7"	"52.668"	"55.1575"	"16925"	"16925"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"808.7"	""	"913.2"	""	"981.4"	""	"874.0"	"5.2"	"978.8"	"1249.0"	""	"840"	"35"	"36.000"	"29.000"	"0.0145294538686971"	"17"	"0.0003839"	"0.001949"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLCGLLSDR"	"[K].lLcGLLSDR.[L]"	"N-Term(TMT6plex); C3(Methylthio)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"632.85071"	"1264.69414"	"1264.69548"	"-1.06"	"-0.00067"	"6/66"	"6"	"66"	"2211605.4977417"	"HCD"	"MS2"	"14.62172"	"109.3"	"100.000"	"74.0471"	"24679"	"24679"	"24655"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.8"	""	"148.2"	""	"175.1"	""	"195.5"	""	"181.6"	"207.4"	""	"834"	"45"	"36.000"	"29.000"	"0.00137447249978"	"29"	"0"	"0.000149"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLCGLLSDR"	"[K].lLcGLLSDR.[L]"	"N-Term(TMT6plex); C3(Methylthio)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"632.85114"	"1264.69499"	"1264.69548"	"-0.38"	"-0.00024"	"6/66"	"6"	"66"	"2142347.70037842"	"HCD"	"MS2"	"14.19754"	"108.8"	"100.000"	"74.0543"	"24630"	"24630"	"24609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.0"	""	"142.6"	""	"188.3"	""	"197.2"	""	"187.8"	"196.7"	""	"816"	"42"	"36.000"	"29.000"	"0.00267707268651586"	"28"	"0"	"0.0001312"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLFPQLR"	"[R].dFLFPQLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U1Z0"	"Rab3 GTPase-activating protein non-catalytic subunit OS=Rattus norvegicus OX=10116 GN=Rab3gap2 PE=1 SV=2"	"Q5U1Z0"	"Rab3 GTPase-activating protein non-catalytic subunit OS=Rattus norvegicus OX=10116 GN=Rab3gap2 PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"632.86627"	"1264.72527"	"1264.72512"	"0.11"	"0.00007"	"6/60"	"6"	"60"	"1903015.61114502"	"HCD"	"MS2"	"16.76061"	"121.3"	"100.000"	"63.1271"	"20177"	"20177"	"20153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.1"	""	"159.1"	""	"179.6"	""	"220.5"	"2.1"	"228.8"	"210.2"	""	"756"	"21"	"35.000"	"28.000"	"0.303034307960543"	"24"	"0.0001889"	"0.0007965"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAESQPK"	"[K].fAESQPk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"632.86816"	"1264.72905"	"1264.73016"	"-0.88"	"-0.00055"	"6/54"	"6"	"54"	"877594.40838623"	"HCD"	"MS2"	"0"	"88.7"	"100.000"	"30.5137"	"6902"	"6902"	"6872"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.1"	""	"117.6"	"2.7"	"117.8"	""	"141.0"	""	"167.3"	"161.9"	""	"751"	"2"	"35.000"	"28.000"	"21.311299933091"	"13"	"0.0006037"	"0.003804"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAESQPK"	"[K].fAESQPk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"632.86859"	"1264.72991"	"1264.73016"	"-0.20"	"-0.00013"	"5/54"	"5"	"54"	"1011031.07836914"	"HCD"	"MS2"	"14.15664"	"99.8"	"100.000"	"30.5529"	"6959"	"6959"	"6933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.9"	""	"118.7"	""	"140.6"	""	"148.2"	"0.3"	"200.7"	"192.9"	""	"756"	"16"	"35.000"	"28.000"	"0.945130546721251"	"18"	"0.0006037"	"0.003848"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSWLDGK"	"[K].tSWLDGk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"632.86859"	"1264.72991"	"1264.73016"	"-0.20"	"-0.00013"	"6/56"	"6"	"56"	"9443987.85900879"	"HCD"	"MS2"	"33.5115"	"634.8"	"82.847"	"42.1640"	"11703"	"11703"	"11696"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"785.6"	""	"713.7"	""	"797.1"	""	"1082.8"	"0.3"	"1270.8"	"1377.6"	""	"756"	"29"	"35.000"	"28.000"	"0.0461840271542322"	"28"	"0.0008125"	"0.007474"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSWLDGK"	"[K].tSWLDGk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"632.86902"	"1264.73076"	"1264.73016"	"0.48"	"0.00030"	"10/56"	"10"	"56"	"9497975.95214844"	"HCD"	"MS2"	"42.04309"	"680.3"	"87.851"	"41.9371"	"11566"	"11566"	"11557"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"831.4"	""	"779.0"	""	"850.7"	""	"1193.9"	""	"1344.2"	"1466.0"	""	"746"	"22"	"35.000"	"28.000"	"0.261041064508848"	"22"	"0.00103"	"0.01113"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYTNPK"	"[K].aLYTNPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"632.88605"	"1264.76482"	"1264.76654"	"-1.36"	"-0.00086"	"6/52"	"6"	"52"	"4388272.78771973"	"HCD"	"MS2"	"30.20907"	"364.5"	"100.000"	"32.9738"	"7907"	"7907"	"7880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"484.6"	""	"469.1"	""	"633.1"	""	"481.8"	""	"747.6"	"643.8"	""	"397"	"31"	"32.000"	"25.000"	"0.0154796276938867"	"18"	"0.0004557"	"0.002549"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYTNPK"	"[K].aLYTNPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"632.88623"	"1264.76518"	"1264.76654"	"-1.08"	"-0.00068"	"6/52"	"6"	"52"	"8548537.38781738"	"HCD"	"MS2"	"0"	"655.4"	"100.000"	"33.1081"	"8005"	"8005"	"7974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1064.4"	""	"1066.6"	""	"1062.3"	""	"786.5"	""	"1135.5"	"1093.0"	""	"386"	"4"	"32.000"	"25.000"	"8.29005303656233"	"16"	"0.005293"	"0.161"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFGNEIK"	"[K].vFGNEIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"632.88654"	"1264.76579"	"1264.76654"	"-0.59"	"-0.00037"	"6/54"	"6"	"54"	"8928623.21795654"	"HCD"	"MS2"	"4.120412"	"695.0"	"100.000"	"40.1908"	"10896"	"10896"	"10877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"904.4"	""	"786.3"	""	"827.7"	""	"1319.5"	""	"1344.4"	"1415.6"	""	"386"	"34"	"32.000"	"25.000"	"0.00773672765020695"	""	"0.0006037"	"0.005343"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFGNEIK"	"[K].vFGNEIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"632.88721"	"1264.76714"	"1264.76654"	"0.47"	"0.00030"	"6/54"	"6"	"54"	"7964997.996521"	"HCD"	"MS2"	"3.74188"	"625.7"	"100.000"	"40.0828"	"10808"	"10808"	"10789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"795.7"	""	"673.0"	""	"794.9"	""	"1186.1"	""	"1212.7"	"1279.4"	""	"382"	"34"	"32.000"	"25.000"	"0.00774521302706413"	""	"0.001007"	"0.01083"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYGLALAK"	"[K].aYGLALAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"632.90448"	"1264.80168"	"1264.80293"	"-0.99"	"-0.00062"	"7/58"	"7"	"58"	"35262219.2860107"	"HCD"	"MS2"	"16.58767"	"996.5"	"36.712"	"42.9486"	"12023"	"12023"	"12003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1294.4"	""	"1167.4"	""	"1252.4"	""	"1826.6"	""	"1900.8"	"2022.8"	""	"182"	"43"	"29.000"	"22.000"	"0.000458185553996994"	"18"	"0.0006037"	"0.004299"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYGLALAK"	"[K].aYGLALAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"632.90448"	"1264.80168"	"1264.80293"	"-0.99"	"-0.00062"	"7/58"	"7"	"58"	"25515422.0211792"	"HCD"	"MS2"	"28.81563"	"1744.6"	"92.314"	"42.6691"	"11865"	"11865"	"11836"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2287.3"	""	"2083.3"	""	"2131.5"	""	"3267.9"	""	"3305.1"	"3505.8"	""	"182"	"45"	"29.000"	"22.000"	"0.00031191868575727"	"19"	"0.000523"	"0.002947"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVSVFK"	"[K].vQVSVFk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"632.90460"	"1264.80193"	"1264.80293"	"-0.79"	"-0.00050"	"6/58"	"6"	"58"	"6079017.10668945"	"HCD"	"MS2"	"0"	"447.4"	"82.759"	"42.9532"	"11979"	"11979"	"11966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"657.4"	""	"541.7"	""	"575.8"	""	"736.2"	"10.0"	"834.0"	"886.3"	""	"182"	"13"	"29.000"	"22.000"	"0.44161253514753"	"19"	"0.004695"	"0.136"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMNSALGK"	"[R].sMNSALGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32PX2"	"Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Rattus norvegicus OX=10116 GN=Aimp2 PE=2 SV=1"	"Q32PX2"	"Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Rattus norvegicus OX=10116 GN=Aimp2 PE=2 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"633.36755"	"1265.72783"	"1265.72878"	"-0.75"	"-0.00047"	"12/72"	"12"	"72"	"1354446.77130127"	"HCD"	"MS2"	"0"	"134.5"	"100.000"	"32.8697"	"7907"	"7907"	"7878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.7"	""	"192.5"	""	"200.7"	""	"171.1"	""	"248.5"	"254.3"	""	"711"	"15"	"35.000"	"28.000"	"1.01587343816979"	"15"	"0.0001889"	"0.0004692"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMNSALGK"	"[R].sMNSALGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32PX2"	"Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Rattus norvegicus OX=10116 GN=Aimp2 PE=2 SV=1"	"Q32PX2"	"Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Rattus norvegicus OX=10116 GN=Aimp2 PE=2 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"633.36768"	"1265.72807"	"1265.72878"	"-0.56"	"-0.00035"	"7/72"	"7"	"72"	"1401833.29656982"	"HCD"	"MS2"	"0"	"129.1"	"100.000"	"32.7879"	"7831"	"7831"	"7800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.4"	""	"184.9"	""	"190.9"	""	"175.0"	""	"240.4"	"237.9"	""	"711"	"23"	"35.000"	"28.000"	"0.165135180341687"	"19"	"0.0001889"	"0.0003791"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDDFLAK"	"[K].vDDFLAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"633.37738"	"1265.74748"	"1265.75056"	"-2.43"	"-0.00154"	"6/50"	"6"	"50"	"10409622.0008545"	"HCD"	"MS2"	"42.53544"	"848.3"	"100.000"	"48.8992"	"14445"	"14445"	"14415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1342.6"	""	"1141.9"	""	"1144.0"	""	"1339.8"	""	"1486.0"	"1578.6"	""	"508"	"29"	"34.000"	"27.000"	"0.0353861827948107"	""	"0.0007793"	"0.007338"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDDFLAK"	"[K].vDDFLAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"633.37854"	"1265.74980"	"1265.75056"	"-0.60"	"-0.00038"	"10/50"	"10"	"50"	"3707020.95397949"	"HCD"	"MS2"	"4.323526"	"316.4"	"100.000"	"48.9578"	"14421"	"14421"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"465.8"	""	"389.8"	""	"467.3"	""	"517.4"	""	"570.3"	"591.0"	""	"497"	"23"	"33.000"	"26.000"	"0.112027951078553"	"23"	"0.0006037"	"0.003757"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDDFLAK"	"[K].vDDFLAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"633.37885"	"1265.75041"	"1265.75056"	"-0.12"	"-0.00007"	"6/50"	"6"	"50"	"12728875.2044678"	"HCD"	"MS2"	"19.99178"	"954.7"	"100.000"	"48.6429"	"14292"	"14292"	"14271"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1534.7"	""	"1254.7"	""	"1261.6"	""	"1529.4"	""	"1641.5"	"1820.0"	""	"505"	"28"	"34.000"	"27.000"	"0.042782029461295"	"25"	"0.00103"	"0.01126"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDDFLAK"	"[K].vDDFLAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"633.37909"	"1265.75090"	"1265.75056"	"0.27"	"0.00017"	"6/50"	"6"	"50"	"4190219.37945557"	"HCD"	"MS2"	"11.59405"	"346.2"	"100.000"	"49.2283"	"14579"	"14579"	"14558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"521.8"	"2.8"	"435.8"	""	"482.2"	""	"577.4"	""	"614.1"	"649.9"	""	"503"	"29"	"34.000"	"27.000"	"0.034876909096128"	"23"	"0.000523"	"0.003145"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDFPAVLR"	"[R].gYDFPAVLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.85535"	"1266.70342"	"1266.70439"	"-0.77"	"-0.00049"	"7/64"	"7"	"64"	"4585578.10803223"	"HCD"	"MS2"	"49.07409"	"304.8"	"100.000"	"51.1108"	"15342"	"15342"	"15318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"417.0"	""	"395.7"	""	"427.7"	""	"496.0"	"2.3"	"558.3"	"591.3"	""	"688"	"17"	"35.000"	"28.000"	"0.710490773598821"	"14"	"0.0001889"	"0.0009751"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDFPAVLR"	"[R].gYDFPAVLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.85547"	"1266.70366"	"1266.70439"	"-0.57"	"-0.00036"	"8/64"	"8"	"64"	"6853095.35449219"	"HCD"	"MS2"	"8.670918"	"352.8"	"100.000"	"51.4148"	"15466"	"15466"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"494.4"	""	"496.4"	""	"483.3"	""	"548.1"	""	"642.2"	"682.3"	""	"698"	"34"	"35.000"	"28.000"	"0.0151644068235878"	"15"	"0.0001889"	"0.0004256"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDFPAVLR"	"[R].gYDFPAVLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"633.85559"	"1266.70391"	"1266.70439"	"-0.38"	"-0.00024"	"7/64"	"7"	"64"	"7096846.58538818"	"HCD"	"MS2"	"5.326926"	"370.9"	"100.000"	"51.1705"	"15316"	"15316"	"15298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"502.8"	""	"533.9"	""	"521.2"	""	"556.9"	""	"672.6"	"731.8"	""	"695"	"35"	"35.000"	"28.000"	"0.00990728847957606"	"19"	"0.0001889"	"0.0004161"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDFPAVLR"	"[R].gYDFPAVLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.85583"	"1266.70439"	"1266.70439"	"0.00"	"0.00000"	"4/64"	"4"	"64"	"4032260.0737915"	"HCD"	"MS2"	"65.92149"	"286.0"	"100.000"	"50.8692"	"15193"	"15193"	"15170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"381.9"	""	"372.7"	""	"362.7"	""	"465.8"	""	"561.3"	"574.0"	""	"700"	"12"	"35.000"	"28.000"	"2.04676529450568"	"13"	"0.000523"	"0.002923"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGFSVLMR"	"[R].lDGFSVLMR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMX7"	"Hsp70-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hspbp1 PE=1 SV=1"	"Q6IMX7"	"Hsp70-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hspbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"633.85773"	"1266.70818"	"1266.70776"	"0.33"	"0.00021"	"7/70"	"7"	"70"	"2943214.6895752"	"HCD"	"MS2"	"41.13433"	"178.0"	"100.000"	"63.0422"	"20142"	"20142"	"20121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.6"	""	"258.3"	""	"281.0"	""	"246.3"	""	"333.1"	"315.8"	""	"688"	"41"	"35.000"	"28.000"	"0.00272620457685282"	"28"	"0"	"0.0001637"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPMTSQK"	"[K].tPmTSQk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"633.85950"	"1266.71172"	"1266.71279"	"-0.85"	"-0.00054"	"5/58"	"5"	"58"	"174925.04486084"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"23.5229"	"4131"	"4131"	"4113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.3"	""	"19.0"	""	"17.0"	""	"24.9"	""	"17.0"	"18.2"	""	"692"	"16"	"35.000"	"28.000"	"0.785373238751803"	"16"	"0.002981"	"0.05463"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILFEQQIF"	"[K].iLFEQQIF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7T2"	"SPRY domain-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Spryd7 PE=2 SV=1"	"Q5M7T2"	"SPRY domain-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Spryd7 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.86768"	"1266.72807"	"1266.72954"	"-1.16"	"-0.00073"	"6/58"	"6"	"58"	"661392.081542969"	"HCD"	"MS2"	"19.68455"	"17.6"	"100.000"	"86.4960"	"29737"	"29737"	"29719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.0"	""	"21.9"	""	"28.0"	""	"34.4"	""	"30.7"	"38.3"	""	"614"	"45"	"34.000"	"27.000"	"0.000918625243438713"	"15"	"0.001217"	"0.01822"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILFEQQIF"	"[K].iLFEQQIF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7T2"	"SPRY domain-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Spryd7 PE=2 SV=1"	"Q5M7T2"	"SPRY domain-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Spryd7 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.86774"	"1266.72820"	"1266.72954"	"-1.06"	"-0.00067"	"6/58"	"6"	"58"	"677980.598876953"	"HCD"	"MS2"	"16.88135"	"16.8"	"100.000"	"86.4373"	"29661"	"29661"	"29643"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.9"	""	"19.7"	""	"29.7"	""	"26.7"	""	"32.7"	"33.1"	""	"614"	"39"	"34.000"	"27.000"	"0.00366554348070532"	"15"	"0.002165"	"0.03275"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDASGAK"	"[K].fLDASGAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"633.87592"	"1266.74455"	"1266.74581"	"-0.99"	"-0.00063"	"7/60"	"7"	"60"	"3753203.0824585"	"HCD"	"MS2"	"7.833915"	"361.7"	"100.000"	"39.1256"	"10419"	"10419"	"10390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"511.3"	""	"487.7"	""	"544.3"	""	"569.6"	"2.0"	"657.7"	"653.1"	""	"481"	"32"	"33.000"	"26.000"	"0.0164859918461865"	"22"	"0.0003146"	"0.001446"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGTNIK"	"[K].eFGTNIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.2188"	"0.0000"	"1"	"1"	"1"	"633.87610"	"1266.74492"	"1266.74581"	"-0.70"	"-0.00044"	"12/58"	"12"	"58"	"7268101.32891846"	"HCD"	"MS2"	"18.2924"	"651.3"	"100.000"	"36.3724"	"9289"	"9289"	"9258"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"961.0"	""	"884.0"	""	"942.6"	""	"1102.3"	""	"1119.5"	"1156.8"	""	"481"	"32"	"33.000"	"26.000"	"0.0144582283864728"	""	"0.0006396"	"0.006363"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGTNIK"	"[K].eFGTNIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.2188"	"0.0000"	"1"	"1"	"1"	"633.87634"	"1266.74541"	"1266.74581"	"-0.32"	"-0.00020"	"12/58"	"12"	"58"	"7540427.08117676"	"HCD"	"MS2"	"19.31788"	"657.2"	"100.000"	"36.4549"	"9366"	"9366"	"9337"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"979.8"	""	"921.4"	""	"954.0"	""	"1110.4"	"0.1"	"1143.4"	"1110.0"	""	"478"	"32"	"33.000"	"26.000"	"0.0149072625680298"	""	"0.0008453"	"0.008392"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDASGAK"	"[K].fLDASGAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"633.87659"	"1266.74590"	"1266.74581"	"0.07"	"0.00004"	"7/60"	"7"	"60"	"4450987.2791748"	"HCD"	"MS2"	"12.28429"	"432.3"	"100.000"	"39.2004"	"10493"	"10493"	"10462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"620.9"	""	"586.8"	""	"628.9"	""	"688.0"	""	"777.6"	"794.2"	""	"473"	"40"	"33.000"	"26.000"	"0.00213713100535324"	""	"0.0001889"	"0.0008765"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVGQLYK"	"[R].tVGQLYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"633.89539"	"1266.78349"	"1266.78219"	"1.03"	"0.00065"	"12/54"	"12"	"54"	"12896325.1030884"	"HCD"	"MS2"	"9.523688"	"849.3"	"77.190"	"35.8045"	"9055"	"9055"	"9035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"943.1"	""	"1259.3"	""	"1238.1"	""	"1472.8"	""	"1539.9"	"1602.1"	""	"238"	"32"	"30.000"	"23.000"	"0.00687934296412804"	"19"	"0.001587"	"0.02108"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVGQLYK"	"[R].tVGQLYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"633.89575"	"1266.78423"	"1266.78219"	"1.61"	"0.00102"	"12/54"	"12"	"54"	"10841754.550415"	"HCD"	"MS2"	"10.57731"	"958.6"	"100.000"	"35.8613"	"9122"	"9122"	"9097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1104.9"	""	"1374.1"	""	"1432.1"	""	"1642.7"	""	"1780.0"	"1756.8"	""	"250"	"32"	"30.000"	"23.000"	"0.00765437989655966"	"19"	"0.001587"	"0.02163"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILGTCK"	"[R].eILGTck.[M]"	"N-Term(TMT6plex); C6(Methylthio); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"634.36047"	"1267.71367"	"1267.71544"	"-1.39"	"-0.00088"	"12/56"	"12"	"56"	"9271148.70111084"	"HCD"	"MS2"	"21.2724"	"798.1"	"100.000"	"42.9875"	"11993"	"11993"	"11975"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1238.5"	""	"1248.6"	""	"1168.0"	""	"1130.6"	""	"1332.3"	"1434.1"	""	"613"	"23"	"34.000"	"27.000"	"0.146700123296889"	"27"	"0.00119"	"0.01573"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILGTCK"	"[R].eILGTck.[M]"	"N-Term(TMT6plex); C6(Methylthio); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"634.36053"	"1267.71379"	"1267.71544"	"-1.30"	"-0.00082"	"12/56"	"12"	"56"	"12292460.2384033"	"HCD"	"MS2"	"25.55081"	"563.2"	"53.441"	"43.2803"	"12157"	"12157"	"12147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"880.8"	""	"838.0"	""	"873.1"	""	"758.5"	"5.4"	"954.6"	"1018.5"	""	"598"	"22"	"34.000"	"27.000"	"0.186067785265579"	""	"0.001966"	"0.02792"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGFSGQK"	"[K].wGFSGQk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"634.36316"	"1267.71904"	"1267.71993"	"-0.70"	"-0.00044"	"5/50"	"5"	"50"	"5833457.16186523"	"HCD"	"MS2"	"12.07282"	"571.7"	"100.000"	"39.9787"	"10766"	"10766"	"10741"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"772.8"	""	"704.9"	""	"780.7"	""	"903.1"	""	"1101.6"	"1163.6"	""	"583"	"24"	"34.000"	"27.000"	"0.122924530749432"	""	"0.0008731"	"0.009137"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGFSGQK"	"[K].wGFSGQk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"634.36371"	"1267.72014"	"1267.71993"	"0.17"	"0.00011"	"5/50"	"5"	"50"	"5351975.99279785"	"HCD"	"MS2"	"9.72433"	"500.9"	"100.000"	"40.0788"	"10851"	"10851"	"10829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"720.8"	""	"635.4"	""	"686.2"	""	"783.6"	""	"932.4"	"991.1"	""	"579"	"24"	"34.000"	"27.000"	"0.116050914753104"	""	"0.0008125"	"0.00775"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYASGNVK"	"[K].aYASGNVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"634.37402"	"1267.74077"	"1267.74106"	"-0.23"	"-0.00014"	"7/60"	"7"	"60"	"806542.531616211"	"HCD"	"MS2"	"0"	"82.4"	"100.000"	"28.2338"	"6047"	"6047"	"6017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.8"	""	"89.9"	""	"81.0"	""	"144.0"	"1.3"	"194.8"	"198.2"	""	"463"	"30"	"33.000"	"26.000"	"0.0225710101131575"	"14"	"0"	"0.0001831"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASYLDK"	"[R].lASYLDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV3; Q6IFU8; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"423.25946"	"1267.76383"	"1267.76621"	"-1.88"	"-0.00079"	"7/54"	"7"	"54"	"4524442.02770996"	"HCD"	"MS2"	"31.85675"	"220.9"	"100.000"	"45.6478"	"13120"	"13120"	"13095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"297.2"	""	"272.9"	""	"312.0"	""	"331.5"	""	"376.0"	"513.6"	""	"326"	"17"	"32.000"	"25.000"	"0.35990477148208"	"15"	"0.002489"	"0.03755"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASYLDK"	"[R].lASYLDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV3; Q6IFU8; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"634.38586"	"1267.76445"	"1267.76621"	"-1.39"	"-0.00088"	"6/54"	"6"	"54"	"24361539.4813232"	"HCD"	"MS2"	"0"	"779.9"	"38.020"	"45.7785"	"13171"	"13171"	"13160"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1045.1"	""	"871.6"	""	"1014.6"	""	"1380.2"	"1.5"	"1563.9"	"1522.3"	""	"326"	"32"	"32.000"	"25.000"	"0.00942296557271319"	""	"0.002265"	"0.03308"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASYLDK"	"[R].lASYLDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV3; Q6IFU8; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"423.25974"	"1267.76465"	"1267.76621"	"-1.23"	"-0.00052"	"7/54"	"7"	"54"	"4098095.1618042"	"HCD"	"MS2"	"37.92235"	"209.1"	"100.000"	"45.4066"	"12972"	"12972"	"12955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"299.1"	""	"242.5"	""	"295.7"	""	"304.0"	""	"319.9"	"526.1"	""	"326"	"15"	"32.000"	"25.000"	"0.482156032047902"	"14"	"0.00373"	"0.08643"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASYLDK"	"[R].lASYLDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV3; Q6IFU8; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"634.38599"	"1267.76470"	"1267.76621"	"-1.19"	"-0.00076"	"6/54"	"6"	"54"	"23053136.3505859"	"HCD"	"MS2"	"0"	"723.9"	"41.202"	"45.5327"	"13021"	"13021"	"13012"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1063.5"	""	"957.9"	""	"1103.8"	""	"1072.4"	""	"1268.6"	"1394.0"	""	"322"	"32"	"32.000"	"25.000"	"0.00928594006061523"	""	"0.001389"	"0.01914"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASYLDK"	"[R].lASYLDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV3; Q6IFU8; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"634.38641"	"1267.76555"	"1267.76621"	"-0.52"	"-0.00033"	"6/54"	"6"	"54"	"34324338.8255615"	"HCD"	"MS2"	"4.910452"	"2946.4"	"100.000"	"45.5013"	"13060"	"13060"	"13035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4574.6"	""	"3895.6"	""	"4433.1"	""	"4682.9"	""	"4925.9"	"5569.0"	""	"305"	"32"	"31.000"	"24.000"	"0.00975595624111038"	""	"0.00132"	"0.01899"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASYLDK"	"[R].lASYLDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV3; Q6IFU8; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"634.38666"	"1267.76604"	"1267.76621"	"-0.13"	"-0.00009"	"6/54"	"6"	"54"	"38486543.9504395"	"HCD"	"MS2"	"0"	"2653.2"	"85.395"	"45.2645"	"12914"	"12914"	"12896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4090.4"	""	"3508.3"	""	"3979.8"	""	"4155.9"	""	"4495.8"	"4945.1"	""	"305"	"32"	"31.000"	"24.000"	"0.00908384768881741"	""	"0.001846"	"0.02628"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTTLIAK"	"[K].yTTLIAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"634.40515"	"1267.80303"	"1267.80260"	"0.34"	"0.00022"	"6/50"	"6"	"50"	"4042346.77661133"	"HCD"	"MS2"	"14.26752"	"348.1"	"100.000"	"41.2654"	"11293"	"11293"	"11269"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"463.4"	""	"484.1"	""	"478.3"	""	"526.5"	""	"655.2"	"695.6"	""	"120"	"32"	"27.000"	"20.000"	"0.00374240901289452"	""	"0.0005564"	"0.003335"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLNVPMFR"	"[K].fLNVPmFR.[N]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"634.85413"	"1268.70098"	"1268.70228"	"-1.03"	"-0.00065"	"6/68"	"6"	"68"	"2805669.52368164"	"HCD"	"MS2"	"18.37043"	"153.9"	"100.000"	"57.3459"	"17874"	"17874"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.4"	""	"203.0"	""	"203.8"	""	"340.2"	"3.8"	"259.4"	"248.1"	""	"668"	"19"	"35.000"	"28.000"	"0.396046761887832"	"14"	"0.003788"	"0.09221"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVVTGCGK"	"[K].tVVTGcGk.[R]"	"N-Term(TMT6plex); C6(Methylthio); K8(TMT6plex)"	"1"	"1"	"Q9QZA6"	"CD151 antigen OS=Rattus norvegicus OX=10116 GN=Cd151 PE=1 SV=2"	"Q9QZA6"	"CD151 antigen OS=Rattus norvegicus OX=10116 GN=Cd151 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"634.85785"	"1268.70842"	"1268.71069"	"-1.78"	"-0.00113"	"7/62"	"7"	"62"	"6029627.90734863"	"HCD"	"MS2"	"29.97388"	"501.1"	"100.000"	"36.6037"	"9427"	"9427"	"9401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"659.8"	""	"746.5"	""	"735.8"	""	"696.1"	""	"977.3"	"936.6"	""	"649"	"31"	"35.000"	"28.000"	"0.0246725876867089"	"18"	"0.0001889"	"0.001011"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMTLFSALR"	"[K].tMTLFSALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"634.86511"	"1268.72295"	"1268.72341"	"-0.36"	"-0.00023"	"7/74"	"7"	"74"	"3598836.92877197"	"HCD"	"MS2"	"58.53377"	"191.3"	"100.000"	"57.5064"	"17885"	"17885"	"17867"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.1"	""	"335.4"	""	"325.9"	""	"243.6"	"7.9"	"270.8"	"287.5"	""	"543"	"18"	"34.000"	"27.000"	"0.384388011258348"	"21"	"0.0006037"	"0.004219"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMTLFSALR"	"[K].tMTLFSALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"634.86523"	"1268.72319"	"1268.72341"	"-0.17"	"-0.00011"	"8/74"	"8"	"74"	"3876445.24249268"	"HCD"	"MS2"	"53.22106"	"201.4"	"100.000"	"57.6825"	"18011"	"18011"	"17989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"369.3"	""	"346.6"	""	"334.9"	""	"257.6"	"8.6"	"294.7"	"288.8"	""	"543"	"17"	"34.000"	"27.000"	"0.577789750984307"	"17"	"0.0006037"	"0.005277"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLAGDK"	"[K].sGYLAGDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"634.86578"	"1268.72429"	"1268.72507"	"-0.62"	"-0.00039"	"7/68"	"7"	"68"	"7126247.72412109"	"HCD"	"MS2"	"14.58981"	"601.1"	"100.000"	"32.2671"	"7617"	"7617"	"7592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"808.8"	""	"755.8"	""	"746.2"	""	"1011.2"	""	"1159.4"	"1223.1"	""	"528"	"44"	"34.000"	"27.000"	"0.000974100860225197"	"17"	"0.0001889"	"0.0006398"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLAGDK"	"[K].sGYLAGDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"634.86603"	"1268.72478"	"1268.72507"	"-0.23"	"-0.00015"	"7/68"	"7"	"68"	"8155381.25402832"	"HCD"	"MS2"	"8.595901"	"636.5"	"100.000"	"32.3898"	"7710"	"7710"	"7686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"907.1"	""	"807.1"	""	"778.4"	""	"1025.3"	""	"1207.0"	"1314.6"	""	"528"	"44"	"34.000"	"27.000"	"0.00094973824481116"	"18"	"0.0001889"	"0.0007166"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTVAAVFR"	"[R].yLTVAAVFR.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"Q6P9T8; P69897"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q6P9T8; P69897"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"634.88098"	"1268.75469"	"1268.75642"	"-1.37"	"-0.00087"	"7/64"	"7"	"64"	"5789308.15826416"	"HCD"	"MS2"	"0"	"287.0"	"100.000"	"58.6127"	"18338"	"18338"	"18313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.4"	""	"435.7"	""	"497.4"	""	"487.3"	"1.6"	"487.6"	"518.2"	""	"319"	"52"	"32.000"	"25.000"	"0.000109083907741388"	"21"	"0.0001859"	"0.0003544"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTVAAVFR"	"[R].yLTVAAVFR.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"Q6P9T8; P69897"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q6P9T8; P69897"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"634.88104"	"1268.75481"	"1268.75642"	"-1.27"	"-0.00081"	"6/64"	"6"	"64"	"1512008.7633667"	"HCD"	"MS2"	"45.01901"	"84.4"	"100.000"	"59.3991"	"18708"	"18708"	"18677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.1"	""	"118.3"	""	"130.7"	""	"131.7"	""	"149.3"	"164.1"	""	"328"	"25"	"32.000"	"25.000"	"0.0546819316931706"	"14"	"0.0003839"	"0.001866"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTVAAVFR"	"[R].yLTVAAVFR.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"Q6P9T8; P69897"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q6P9T8; P69897"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"634.88147"	"1268.75566"	"1268.75642"	"-0.60"	"-0.00038"	"8/64"	"8"	"64"	"5129454.58294678"	"HCD"	"MS2"	"0"	"269.6"	"100.000"	"58.7598"	"18448"	"18448"	"18421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"280.2"	""	"410.5"	""	"462.1"	""	"462.2"	"3.5"	"438.0"	"496.0"	""	"322"	"58"	"32.000"	"25.000"	"2.37042312891667E-05"	"23"	"0.0001308"	"0.0002663"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTVAAVFR"	"[R].yLTVAAVFR.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"Q6P9T8; P69897"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q6P9T8; P69897"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"634.88159"	"1268.75591"	"1268.75642"	"-0.41"	"-0.00026"	"7/64"	"7"	"64"	"17121716.7189941"	"HCD"	"MS2"	"6.034176"	"335.5"	"40.412"	"58.9149"	"18458"	"18458"	"18441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.3"	""	"507.2"	""	"602.4"	""	"539.1"	""	"566.2"	"653.2"	""	"322"	"49"	"32.000"	"25.000"	"0.000218185495388517"	"18"	"0.0001889"	"0.0004788"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTVAAVFR"	"[R].yLTVAAVFR.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"Q6P9T8; P69897"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q6P9T8; P69897"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"634.88190"	"1268.75652"	"1268.75642"	"0.07"	"0.00005"	"7/64"	"7"	"64"	"20167440.0869141"	"HCD"	"MS2"	"5.699267"	"375.9"	"42.911"	"59.0506"	"18566"	"18566"	"18549"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"373.2"	""	"590.1"	""	"678.6"	""	"579.9"	""	"652.0"	"690.5"	""	"324"	"49"	"32.000"	"25.000"	"0.000219035755237473"	"18"	"0.0001889"	"0.0005168"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVTNTTK"	"[R].fVTNTTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYR6"	"Haloacid dehalogenase-like hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Hdhd2 PE=2 SV=1"	"Q6AYR6"	"Haloacid dehalogenase-like hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Hdhd2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"634.88318"	"1268.75908"	"1268.76146"	"-1.87"	"-0.00119"	"9/60"	"9"	"60"	"2202684.69818115"	"HCD"	"MS2"	"0"	"251.7"	"100.000"	"33.1470"	"8021"	"8021"	"7990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"349.3"	""	"333.4"	""	"361.1"	""	"361.1"	"1.3"	"479.9"	"500.5"	""	"301"	"12"	"31.000"	"24.000"	"1.05569022412206"	"13"	"0.0009727"	"0.01071"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHLGTALK"	"[K].aHLGTALk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"3"	"3"	"0.7400"	"0.0000"	"1"	"1"	"1"	"423.60703"	"1268.80652"	"1268.80908"	"-2.01"	"-0.00085"	"7/56"	"7"	"56"	"7290057.32159424"	"HCD"	"MS2"	"29.16386"	"379.5"	"100.000"	"29.0556"	"6306"	"6306"	"6302"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.5"	""	"578.1"	""	"615.8"	""	"659.6"	"6.0"	"609.8"	"539.3"	""	"189"	"50"	"29.000"	"22.000"	"9.98692546206909E-05"	""	"0"	"0.0001422"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHLGTALK"	"[K].aHLGTALk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"634.90698"	"1268.80669"	"1268.80908"	"-1.88"	"-0.00119"	"12/56"	"12"	"56"	"1026154.44299316"	"HCD"	"MS2"	"100"	"82.3"	"100.000"	"29.1685"	"6393"	"6393"	"6382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.8"	""	"132.4"	""	"144.9"	""	"140.2"	""	"134.4"	"114.6"	""	"189"	"24"	"29.000"	"22.000"	"0.0375346014248621"	"18"	"0.0001889"	"0.0005367"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHLGTALK"	"[K].aHLGTALk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"423.60721"	"1268.80707"	"1268.80908"	"-1.58"	"-0.00067"	"6/56"	"6"	"56"	"9332997.75317383"	"HCD"	"MS2"	"29.15923"	"468.6"	"100.000"	"29.1341"	"6380"	"6380"	"6369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"705.1"	""	"722.6"	""	"796.9"	""	"803.8"	"0.7"	"778.5"	"619.5"	""	"185"	"41"	"29.000"	"22.000"	"0.000780084650931954"	""	"0.0001308"	"0.0003114"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHLGTALK"	"[K].aHLGTALk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"634.90735"	"1268.80742"	"1268.80908"	"-1.31"	"-0.00083"	"12/56"	"12"	"56"	"1265687.51727295"	"HCD"	"MS2"	"0"	"92.5"	"100.000"	"29.1106"	"6328"	"6328"	"6312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.8"	""	"152.4"	""	"154.5"	""	"147.1"	""	"136.2"	"137.3"	""	"185"	"39"	"29.000"	"22.000"	"0.00107929889578139"	""	"0.0001308"	"0.0002828"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLTGPVK"	"[R].vPLTGPVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"634.92035"	"1268.83342"	"1268.83423"	"-0.64"	"-0.00040"	"7/56"	"7"	"56"	"3160426.12896729"	"HCD"	"MS2"	"0"	"236.1"	"100.000"	"39.7820"	"10731"	"10731"	"10702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.2"	""	"215.3"	""	"228.8"	""	"230.8"	"5.6"	"301.8"	"987.8"	""	"94"	"26"	"26.000"	"19.000"	"0.0105705566474282"	"18"	"0.0007076"	"0.006923"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGASGSFK"	"[K].gTGASGSFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"3"	"D3ZBN0; P15865"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1;Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D3ZBN0; P15865; P06349"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"635.36285"	"1269.71843"	"1269.72032"	"-1.49"	"-0.00095"	"8/74"	"8"	"74"	"2957912.00299072"	"HCD"	"MS2"	"0"	"284.8"	"100.000"	"28.2829"	"6031"	"6031"	"6008"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"400.7"	""	"506.9"	""	"606.0"	""	"362.0"	""	"484.4"	"330.8"	""	"518"	"41"	"34.000"	"27.000"	"0.00209555837887201"	"18"	"0.0001308"	"0.0002573"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGASGSFK"	"[K].gTGASGSFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"3"	"D3ZBN0; P15865"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1;Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D3ZBN0; P15865; P06349"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"635.36285"	"1269.71843"	"1269.72032"	"-1.49"	"-0.00095"	"8/74"	"8"	"74"	"3073854.64318848"	"HCD"	"MS2"	"0"	"299.7"	"100.000"	"28.3575"	"6097"	"6097"	"6071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"418.8"	""	"530.9"	""	"620.6"	""	"402.1"	"0.1"	"530.7"	"326.6"	""	"518"	"41"	"34.000"	"27.000"	"0.00209555837887201"	"22"	"0.0001308"	"0.0002832"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIDTTSK"	"[K].fIDTTSk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"635.37573"	"1269.74419"	"1269.74547"	"-1.01"	"-0.00064"	"6/54"	"6"	"54"	"12091907.9213257"	"HCD"	"MS2"	"12.93644"	"723.5"	"73.852"	"37.6239"	"9845"	"9845"	"9825"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1072.7"	""	"1054.9"	""	"1125.6"	""	"1351.2"	""	"1233.4"	"1005.7"	""	"403"	"31"	"33.000"	"26.000"	"0.0143971009704216"	"23"	"0.00103"	"0.01114"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIDTTSK"	"[K].fIDTTSk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"635.37592"	"1269.74455"	"1269.74547"	"-0.72"	"-0.00046"	"6/54"	"6"	"54"	"9468957.56036377"	"HCD"	"MS2"	"4.493127"	"764.7"	"100.000"	"37.5513"	"9772"	"9772"	"9752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1137.3"	""	"1124.2"	""	"1163.1"	""	"1395.4"	"0.2"	"1312.9"	"1096.7"	""	"403"	"30"	"33.000"	"26.000"	"0.0197367232059853"	"23"	"0.0008731"	"0.008948"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFLVLAAHR"	"[R].nFLVLAAHR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"423.92535"	"1269.76151"	"1269.76291"	"-1.10"	"-0.00047"	"9/82"	"9"	"82"	"2539399.01208496"	"HCD"	"MS2"	"0"	"89.9"	"100.000"	"39.6319"	"10627"	"10627"	"10598"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.5"	""	"106.1"	""	"121.5"	""	"130.0"	""	"140.1"	"260.6"	""	"423"	"19"	"33.000"	"26.000"	"0.250790090237354"	"14"	"0.0003839"	"0.002044"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFLVLAAHR"	"[R].nFLVLAAHR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"423.92538"	"1269.76160"	"1269.76291"	"-1.03"	"-0.00044"	"5/82"	"5"	"82"	"3150490.4586792"	"HCD"	"MS2"	"29.64231"	"91.6"	"100.000"	"39.7413"	"10715"	"10715"	"10686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.0"	""	"110.4"	""	"109.2"	""	"122.3"	""	"130.4"	"312.7"	""	"423"	"25"	"33.000"	"26.000"	"0.0634322872765888"	"14"	"0.0002277"	"0.00119"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVTSTYK"	"[R].iVTSTYk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"635.39410"	"1269.78093"	"1269.78186"	"-0.73"	"-0.00046"	"5/52"	"5"	"52"	"16757118.9118652"	"HCD"	"MS2"	"6.284913"	"1210.9"	"100.000"	"35.1918"	"8847"	"8847"	"8826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1894.5"	""	"1859.9"	""	"1877.9"	""	"1779.4"	""	"1954.0"	"2090.6"	""	"328"	"33"	"32.000"	"25.000"	"0.008746692285997"	"20"	"0.00119"	"0.01589"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVTSTYK"	"[R].iVTSTYk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"635.39435"	"1269.78142"	"1269.78186"	"-0.35"	"-0.00022"	"5/52"	"5"	"52"	"18672513.7891846"	"HCD"	"MS2"	"12.45965"	"1350.4"	"100.000"	"35.1504"	"8787"	"8787"	"8766"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2130.0"	""	"2021.5"	""	"2101.3"	""	"1986.1"	""	"2182.7"	"2352.2"	""	"329"	"33"	"32.000"	"25.000"	"0.00867293122040543"	"20"	"0.0009404"	"0.01021"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPGLNK"	"[R].iLGPGLNk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"423.94736"	"1269.82752"	"1269.82948"	"-1.54"	"-0.00065"	"9/60"	"9"	"60"	"6686143.53607178"	"HCD"	"MS2"	"34.75703"	"291.2"	"100.000"	"42.8063"	"11965"	"11965"	"11939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"367.7"	""	"403.6"	""	"436.1"	""	"487.1"	"1.8"	"521.2"	"541.5"	""	"151"	"23"	"28.000"	"21.000"	"0.0343515985413287"	"14"	"0.0009404"	"0.009966"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPGLNK"	"[R].iLGPGLNk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"635.41742"	"1269.82756"	"1269.82948"	"-1.51"	"-0.00096"	"7/60"	"7"	"60"	"46249442.3730469"	"HCD"	"MS2"	"7.024722"	"603.4"	"20.311"	"42.5614"	"11821"	"11821"	"11804"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"826.2"	""	"831.9"	""	"896.5"	""	"968.7"	"3.9"	"1096.3"	"1092.0"	""	"151"	"33"	"28.000"	"21.000"	"0.00402667846093154"	""	"0.0008731"	"0.009326"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPGLNK"	"[R].iLGPGLNk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"635.41748"	"1269.82768"	"1269.82948"	"-1.41"	"-0.00090"	"7/60"	"7"	"60"	"52274988.0947266"	"HCD"	"MS2"	"2.390619"	"426.6"	"12.329"	"42.8224"	"11972"	"11972"	"11955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"598.8"	""	"587.6"	""	"635.1"	""	"654.6"	"3.0"	"782.9"	"779.3"	""	"151"	"33"	"28.000"	"21.000"	"0.00352327832137288"	""	"0.0008453"	"0.008307"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQQLVPK"	"[K].vQQLVPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"423.94748"	"1269.82788"	"1269.82948"	"-1.26"	"-0.00053"	"4/60"	"4"	"60"	"22437293.1079102"	"HCD"	"MS2"	"42.8099"	"454.5"	"47.342"	"38.2252"	"10049"	"10049"	"10023"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"544.2"	""	"526.6"	""	"546.8"	""	"844.0"	""	"911.7"	"945.6"	""	"151"	"8"	"28.000"	"21.000"	"1.20766631160407"	"13"	"0.00162"	"0.02249"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQQLVPK"	"[K].vQQLVPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"423.94751"	"1269.82798"	"1269.82948"	"-1.18"	"-0.00050"	"5/60"	"5"	"60"	"14941775.8632813"	"HCD"	"MS2"	"48.92456"	"245.0"	"36.124"	"38.3731"	"10153"	"10153"	"10129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.6"	""	"275.9"	""	"286.1"	""	"457.3"	""	"471.4"	"529.9"	""	"151"	"19"	"28.000"	"21.000"	"0.0946121587080769"	"16"	"0.001217"	"0.01726"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPELVER"	"[K].wLPELVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.87189"	"1270.73650"	"1270.73569"	"0.64"	"0.00040"	"5/62"	"5"	"62"	"2465794.89691162"	"HCD"	"MS2"	"35.98731"	"124.4"	"100.000"	"59.7081"	"18834"	"18834"	"18805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.8"	""	"155.1"	""	"168.5"	""	"213.6"	"0.6"	"232.4"	"232.0"	""	"534"	"19"	"34.000"	"27.000"	"0.312256337402306"	"14"	"0.0008125"	"0.007585"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPELVER"	"[K].wLPELVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"635.87213"	"1270.73699"	"1270.73569"	"1.02"	"0.00065"	"5/62"	"5"	"62"	"2454597.59082031"	"HCD"	"MS2"	"23.50094"	"137.0"	"100.000"	"59.5217"	"18704"	"18704"	"18681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.9"	""	"174.1"	""	"193.9"	""	"227.9"	"1.0"	"248.6"	"266.3"	""	"505"	"26"	"34.000"	"27.000"	"0.06415956081512"	"18"	"0.0007793"	"0.00722"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFADIILGR"	"[K].hFADIILGR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64244"	"ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Cd38 PE=1 SV=1"	"Q64244"	"ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Cd38 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"424.25308"	"1270.74469"	"1270.74692"	"-1.75"	"-0.00074"	"7/64"	"7"	"64"	"5882972.32751465"	"HCD"	"MS2"	"33.3321"	"134.4"	"100.000"	"43.4698"	"12183"	"12183"	"12159"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.7"	""	"183.7"	""	"182.3"	""	"211.2"	""	"249.7"	"299.9"	""	"527"	"40"	"34.000"	"27.000"	"0.00273388737568046"	"23"	"0.0001308"	"0.0003071"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQSALAAIR"	"[K].vLQSALAAIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TP98"	"Interleukin enhancer-binding factor 2 OS=Rattus norvegicus OX=10116 GN=Ilf2 PE=2 SV=1"	"Q7TP98"	"Interleukin enhancer-binding factor 2 OS=Rattus norvegicus OX=10116 GN=Ilf2 PE=2 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"635.90570"	"1270.80412"	"1270.80444"	"-0.25"	"-0.00016"	"7/86"	"7"	"86"	"1860066.45477295"	"HCD"	"MS2"	"46.96074"	"122.5"	"100.000"	"58.6230"	"18396"	"18396"	"18373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.4"	""	"146.0"	""	"154.9"	""	"225.0"	"0.6"	"241.2"	"252.7"	""	"266"	"15"	"31.000"	"24.000"	"0.393415658051356"	"16"	"0.00119"	"0.01574"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQSALAAIR"	"[K].vLQSALAAIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TP98"	"Interleukin enhancer-binding factor 2 OS=Rattus norvegicus OX=10116 GN=Ilf2 PE=2 SV=1"	"Q7TP98"	"Interleukin enhancer-binding factor 2 OS=Rattus norvegicus OX=10116 GN=Ilf2 PE=2 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"635.90625"	"1270.80522"	"1270.80444"	"0.62"	"0.00039"	"9/86"	"9"	"86"	"5939299.87158203"	"HCD"	"MS2"	"42.46124"	"313.1"	"100.000"	"58.1557"	"18151"	"18151"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"362.9"	""	"356.3"	""	"354.9"	""	"582.1"	"0.8"	"655.0"	"663.0"	""	"254"	"43"	"31.000"	"24.000"	"0.00059952006240476"	"22"	"0"	"0.0001747"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQSALAAIR"	"[K].vLQSALAAIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TP98"	"Interleukin enhancer-binding factor 2 OS=Rattus norvegicus OX=10116 GN=Ilf2 PE=2 SV=1"	"Q7TP98"	"Interleukin enhancer-binding factor 2 OS=Rattus norvegicus OX=10116 GN=Ilf2 PE=2 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"635.90631"	"1270.80535"	"1270.80444"	"0.71"	"0.00045"	"9/86"	"9"	"86"	"6702894.21795654"	"HCD"	"MS2"	"62.49031"	"380.3"	"100.000"	"58.3224"	"18273"	"18273"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.8"	""	"473.1"	""	"434.9"	""	"662.3"	""	"824.7"	"832.9"	""	"254"	"24"	"31.000"	"24.000"	"0.0476215712851764"	"24"	"0.0001308"	"0.0002835"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLGSVIK"	"[R].vPLGSVIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"635.92749"	"1270.84770"	"1270.84988"	"-1.71"	"-0.00109"	"6/56"	"6"	"56"	"6559402.87817383"	"HCD"	"MS2"	"0"	"395.6"	"100.000"	"46.2187"	"13348"	"13348"	"13328"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"439.7"	""	"457.5"	""	"541.1"	""	"703.0"	"10.9"	"799.8"	"803.9"	""	"95"	"44"	"26.000"	"19.000"	"0.000190850635153247"	"17"	"0.000523"	"0.002945"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLGSVIK"	"[R].vPLGSVIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"635.92822"	"1270.84917"	"1270.84988"	"-0.56"	"-0.00036"	"6/56"	"6"	"56"	"6838792.90863037"	"HCD"	"MS2"	"12.4624"	"426.1"	"100.000"	"45.9406"	"13186"	"13186"	"13165"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"462.8"	""	"506.0"	""	"544.3"	""	"778.0"	"11.0"	"859.6"	"884.6"	""	"95"	"44"	"26.000"	"19.000"	"0.000180174617862499"	""	"0.0003839"	"0.001614"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDMSAK"	"[K].yVDMSAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.35547"	"1271.70366"	"1271.70698"	"-2.61"	"-0.00166"	"8/52"	"8"	"52"	"3333318.63946533"	"HCD"	"MS2"	"0"	"287.2"	"100.000"	"36.0195"	"9187"	"9187"	"9161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"376.8"	""	"365.3"	""	"371.4"	""	"475.2"	""	"584.0"	"558.5"	""	"601"	"5"	"34.000"	"27.000"	"10.2764822475369"	"13"	"0.001158"	"0.01541"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDMSAK"	"[K].yVDMSAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"636.35632"	"1271.70537"	"1271.70698"	"-1.27"	"-0.00081"	"8/52"	"8"	"52"	"3342183.49212646"	"HCD"	"MS2"	"45.71267"	"287.3"	"100.000"	"35.9393"	"9111"	"9111"	"9083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.7"	""	"355.8"	""	"392.1"	""	"443.2"	""	"599.6"	"561.9"	""	"582"	"6"	"34.000"	"27.000"	"8.20149432997956"	"13"	"0.0006037"	"0.005725"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSFDLGK"	"[K].fSFDLGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"636.37305"	"1271.73882"	"1271.73999"	"-0.93"	"-0.00059"	"6/52"	"6"	"52"	"5336141.76196289"	"HCD"	"MS2"	"21.28511"	"453.3"	"100.000"	"56.8204"	"17605"	"17605"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"635.9"	""	"581.6"	""	"598.3"	""	"780.1"	"9.7"	"845.9"	"845.1"	""	"595"	"29"	"34.000"	"27.000"	"0.034394339205215"	""	"0.0005564"	"0.003352"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSFDLGK"	"[K].fSFDLGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"636.37354"	"1271.73979"	"1271.73999"	"-0.16"	"-0.00010"	"6/52"	"6"	"52"	"5447381.55230713"	"HCD"	"MS2"	"16.46666"	"469.0"	"100.000"	"57.0256"	"17743"	"17743"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"667.1"	""	"602.1"	""	"647.7"	""	"797.9"	"8.4"	"853.1"	"866.9"	""	"584"	"29"	"34.000"	"27.000"	"0.0344653625610305"	""	"0.000523"	"0.003004"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"636.38885"	"1271.77043"	"1271.77236"	"-1.51"	"-0.00096"	"7/70"	"7"	"70"	"6034919.80480957"	"HCD"	"MS2"	"25.29347"	"405.9"	"100.000"	"29.5262"	"6538"	"6538"	"6516"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"673.5"	""	"490.5"	""	"553.9"	""	"602.4"	"0.3"	"689.5"	"833.6"	""	"448"	"35"	"33.000"	"26.000"	"0.00678028607894692"	"19"	"0.0002277"	"0.001144"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"636.38940"	"1271.77153"	"1271.77236"	"-0.65"	"-0.00041"	"7/70"	"7"	"70"	"5239210.76580811"	"HCD"	"MS2"	"39.65123"	"359.6"	"100.000"	"29.4384"	"6461"	"6461"	"6438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"560.1"	""	"479.2"	""	"472.1"	""	"540.6"	""	"615.6"	"743.0"	""	"436"	"36"	"33.000"	"26.000"	"0.00610177927680291"	"21"	"0.0002277"	"0.001112"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIPANTK"	"[K].gIIPANTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MH9"	"Bardet-Biedl syndrome 2 protein homolog OS=Rattus norvegicus OX=10116 GN=Bbs2 PE=2 SV=1"	"Q99MH9"	"Bardet-Biedl syndrome 2 protein homolog OS=Rattus norvegicus OX=10116 GN=Bbs2 PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"636.40533"	"1271.80339"	"1271.80874"	"-4.21"	"-0.00268"	"5/60"	"5"	"60"	"2038713.57818604"	"HCD"	"MS2"	"57.14161"	"101.5"	"100.000"	"68.1599"	"22224"	"22224"	"22202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.6"	""	"115.9"	""	"118.3"	""	"190.3"	""	"208.6"	"218.4"	""	"357"	"11"	"32.000"	"25.000"	"1.3050832640179"	"16"	"0.007472"	"0.2892"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPTLGAGGK"	"[K].lPTLGAGGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"636.40778"	"1271.80828"	"1271.80874"	"-0.37"	"-0.00023"	"7/64"	"7"	"64"	"19466566.3652344"	"HCD"	"MS2"	"24.72195"	"1005.0"	"74.583"	"40.9375"	"11202"	"11202"	"11181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1027.4"	""	"1096.5"	""	"1173.5"	""	"1993.3"	"8.2"	"2154.4"	"2099.3"	""	"341"	"10"	"32.000"	"25.000"	"1.58753892767265"	"16"	"0.001686"	"0.02306"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPTLGAGGK"	"[K].lPTLGAGGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"636.40839"	"1271.80950"	"1271.80874"	"0.59"	"0.00038"	"5/64"	"5"	"64"	"19438787.1650391"	"HCD"	"MS2"	"45.29603"	"1129.2"	"89.733"	"40.7541"	"11083"	"11083"	"11061"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1165.6"	""	"1178.3"	""	"1276.6"	""	"2293.2"	""	"2460.9"	"2365.2"	""	"313"	"10"	"31.000"	"24.000"	"1.53643553082627"	"15"	"0.002456"	"0.03631"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALLALAK"	"[R].nALLALAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"636.42511"	"1271.84294"	"1271.84513"	"-1.72"	"-0.00109"	"7/72"	"7"	"72"	"83986281.2856445"	"HCD"	"MS2"	"0"	"803.3"	"14.563"	"50.1087"	"14934"	"14934"	"14919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1122.0"	""	"1100.3"	""	"1117.2"	""	"1345.7"	""	"1405.0"	"1518.5"	""	"145"	"47"	"28.000"	"21.000"	"0.000157883958495604"	""	"0.0006037"	"0.004743"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALLALAK"	"[R].nALLALAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"424.61920"	"1271.84305"	"1271.84513"	"-1.63"	"-0.00069"	"6/72"	"6"	"72"	"12786376.2512207"	"HCD"	"MS2"	"16.28834"	"510.0"	"100.000"	"49.8503"	"14782"	"14782"	"14762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"677.8"	""	"696.5"	""	"704.3"	""	"901.2"	""	"916.3"	"938.7"	""	"145"	"35"	"28.000"	"21.000"	"0.00232990389051423"	"16"	"0.0001889"	"0.0005625"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALLALAK"	"[R].nALLALAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.42529"	"1271.84331"	"1271.84513"	"-1.43"	"-0.00091"	"12/72"	"12"	"72"	"2828970.58795166"	"HCD"	"MS2"	"41.40725"	"223.1"	"100.000"	"50.6515"	"15154"	"15154"	"15132"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.9"	""	"255.3"	""	"296.5"	""	"406.9"	"2.9"	"441.7"	"425.6"	""	"145"	"26"	"28.000"	"21.000"	"0.0175929231893475"	"14"	"0.0001889"	"0.0007516"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILGGVK"	"[K].nIILGGVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"636.42529"	"1271.84331"	"1271.84513"	"-1.43"	"-0.00091"	"7/72"	"7"	"72"	"44820781.6223145"	"HCD"	"MS2"	"17.01677"	"675.8"	"22.484"	"43.6446"	"12303"	"12303"	"12287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"957.4"	""	"923.9"	""	"904.7"	""	"979.9"	""	"1426.3"	"1220.4"	""	"145"	"46"	"28.000"	"21.000"	"0.000202926145673491"	""	"0.0006037"	"0.005944"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALLALAK"	"[R].nALLALAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"424.61932"	"1271.84342"	"1271.84513"	"-1.35"	"-0.00057"	"7/72"	"7"	"72"	"10217905.4168701"	"HCD"	"MS2"	"57.74344"	"427.1"	"100.000"	"50.0858"	"14925"	"14925"	"14905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"539.2"	""	"577.2"	""	"601.0"	""	"744.8"	""	"783.5"	"809.1"	""	"145"	"26"	"28.000"	"21.000"	"0.0188511568329482"	"16"	"0.0006037"	"0.003892"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALLALAK"	"[R].nALLALAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"636.42542"	"1271.84355"	"1271.84513"	"-1.24"	"-0.00079"	"7/72"	"7"	"72"	"45935989.6374512"	"HCD"	"MS2"	"0"	"959.1"	"30.639"	"49.8019"	"14763"	"14763"	"14751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1325.8"	""	"1335.5"	""	"1343.4"	""	"1616.1"	"2.4"	"1667.6"	"1792.2"	""	"145"	"48"	"28.000"	"21.000"	"0.000106007845148112"	""	"0.0006037"	"0.00512"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALLALAK"	"[R].nALLALAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"636.42548"	"1271.84368"	"1271.84513"	"-1.14"	"-0.00073"	"7/72"	"7"	"72"	"22134686.30896"	"HCD"	"MS2"	"2.834404"	"510.3"	"32.625"	"50.0662"	"14867"	"14867"	"14857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"691.9"	""	"703.6"	""	"728.2"	""	"822.8"	"6.4"	"909.4"	"972.1"	""	"145"	"48"	"28.000"	"21.000"	"0.000106007845148112"	""	"0.0003839"	"0.001807"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILGGVK"	"[K].nIILGGVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"636.42548"	"1271.84368"	"1271.84513"	"-1.14"	"-0.00073"	"7/72"	"7"	"72"	"42132354.8325195"	"HCD"	"MS2"	"15.53464"	"723.6"	"25.330"	"43.4172"	"12161"	"12161"	"12143"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1073.9"	""	"956.0"	""	"1044.1"	""	"1086.1"	""	"1423.3"	"1277.7"	""	"145"	"46"	"28.000"	"21.000"	"0.000200141894575975"	""	"0.0004557"	"0.00258"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPNLPK"	"[K].fVPNLPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"424.94058"	"1272.80719"	"1272.80801"	"-0.65"	"-0.00027"	"5/56"	"5"	"56"	"8346913.00524902"	"HCD"	"MS2"	"4.681421"	"344.4"	"100.000"	"47.9882"	"14072"	"14072"	"14050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"506.6"	""	"483.3"	""	"522.2"	""	"528.8"	""	"618.1"	"607.5"	""	"411"	"26"	"33.000"	"26.000"	"0.0540520072334501"	"22"	"0.0005564"	"0.003303"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPWSALK"	"[K].iPWSALk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"636.90759"	"1272.80791"	"1272.80801"	"-0.08"	"-0.00005"	"5/48"	"5"	"48"	"8750663.07104492"	"HCD"	"MS2"	"43.02911"	"502.2"	"100.000"	"57.2054"	"17816"	"17816"	"17797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"551.5"	""	"545.3"	""	"603.4"	""	"924.3"	"0.0"	"1076.7"	"1071.6"	""	"410"	"30"	"33.000"	"26.000"	"0.0197584949842914"	""	"0.0006396"	"0.006328"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPNLPK"	"[K].fVPNLPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"636.90765"	"1272.80803"	"1272.80801"	"0.01"	"0.00001"	"10/56"	"10"	"56"	"10980074.6085815"	"HCD"	"MS2"	"45.34652"	"619.1"	"100.000"	"47.6577"	"13889"	"13889"	"13864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"904.9"	""	"882.2"	""	"859.7"	""	"931.8"	""	"1167.2"	"1120.5"	""	"410"	"28"	"33.000"	"26.000"	"0.0351361248039227"	"23"	"0.001158"	"0.01545"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPWSALK"	"[K].iPWSALk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"636.90790"	"1272.80852"	"1272.80801"	"0.40"	"0.00025"	"5/48"	"5"	"48"	"8479392.08990479"	"HCD"	"MS2"	"43.11294"	"512.6"	"100.000"	"57.0065"	"17681"	"17681"	"17659"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"583.0"	""	"571.4"	""	"636.8"	""	"932.1"	""	"1066.6"	"1085.6"	""	"409"	"30"	"33.000"	"26.000"	"0.0195295983841384"	""	"0.0008453"	"0.007945"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPNLPK"	"[K].fVPNLPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"636.90790"	"1272.80852"	"1272.80801"	"0.40"	"0.00025"	"10/56"	"10"	"56"	"12261646.0774536"	"HCD"	"MS2"	"21.25216"	"690.0"	"100.000"	"47.9468"	"14055"	"14055"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1001.1"	""	"931.4"	""	"976.8"	""	"1058.0"	""	"1303.5"	"1267.3"	""	"409"	"28"	"33.000"	"26.000"	"0.0355380269479247"	"22"	"0.001587"	"0.0216"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPNLPK"	"[K].fVPNLPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"424.94107"	"1272.80866"	"1272.80801"	"0.51"	"0.00021"	"5/56"	"5"	"56"	"8518107.67205811"	"HCD"	"MS2"	"9.264585"	"354.1"	"100.000"	"47.7083"	"13910"	"13910"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"537.8"	""	"496.3"	""	"529.0"	""	"547.0"	""	"614.7"	"628.9"	""	"409"	"27"	"33.000"	"26.000"	"0.0386094230890192"	"22"	"0.000494"	"0.002655"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLINK"	"[K].vLDLINk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"424.94733"	"1272.82743"	"1272.82914"	"-1.35"	"-0.00057"	"5/50"	"5"	"50"	"4851701.52728271"	"HCD"	"MS2"	"14.5308"	"229.9"	"100.000"	"56.3666"	"17474"	"17474"	"17445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"306.3"	""	"357.7"	""	"280.5"	""	"376.8"	""	"447.5"	"412.3"	""	"288"	"26"	"31.000"	"24.000"	"0.032988494199856"	""	"0.002953"	"0.05145"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLINK"	"[K].vLDLINk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"636.91766"	"1272.82805"	"1272.82914"	"-0.86"	"-0.00055"	"12/50"	"12"	"50"	"22459310.5792236"	"HCD"	"MS2"	"15.76195"	"1043.0"	"71.887"	"56.3367"	"17462"	"17462"	"17445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1373.5"	""	"1625.5"	""	"1184.8"	""	"1744.1"	""	"2040.4"	"1926.2"	""	"286"	"36"	"31.000"	"24.000"	"0.00343033107419787"	""	"0.0008731"	"0.009223"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLINK"	"[K].vLDLINk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"424.94769"	"1272.82853"	"1272.82914"	"-0.49"	"-0.00021"	"5/50"	"5"	"50"	"4330739.28082275"	"HCD"	"MS2"	"8.518416"	"216.4"	"100.000"	"56.1517"	"17332"	"17332"	"17307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"272.2"	""	"345.8"	""	"242.8"	""	"365.3"	""	"423.3"	"407.7"	""	"286"	"22"	"31.000"	"24.000"	"0.0811588785734222"	"21"	"0.004167"	"0.107"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLINK"	"[K].vLDLINk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"636.91791"	"1272.82854"	"1272.82914"	"-0.48"	"-0.00030"	"12/50"	"12"	"50"	"8404406.7097168"	"HCD"	"MS2"	"1.562811"	"361.3"	"62.661"	"56.6546"	"17591"	"17591"	"17573"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"459.3"	""	"553.0"	""	"409.9"	""	"574.5"	""	"729.7"	"706.3"	""	"286"	"36"	"31.000"	"24.000"	"0.00347005243596786"	""	"0.0006037"	"0.003825"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALLALAK"	"[R].nALLALAk.[G]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"3"	"636.91803"	"1272.82878"	"1272.82914"	"-0.28"	"-0.00018"	"7/72"	"7"	"72"	"8178754.03692627"	"HCD"	"MS2"	"55.77288"	"538.2"	"100.000"	"56.9261"	"17648"	"17648"	"17627"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"636.9"	""	"612.3"	""	"688.5"	""	"959.2"	""	"1095.3"	"1125.4"	""	"286"	"26"	"31.000"	"24.000"	"0.035919975970587"	""	"0.0004166"	"0.002347"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEALVAK"	"[K].aLEALVAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"424.94778"	"1272.82880"	"1272.82914"	"-0.27"	"-0.00011"	"8/56"	"8"	"56"	"3843658.7432251"	"HCD"	"MS2"	"0"	"173.5"	"100.000"	"48.5775"	"14313"	"14313"	"14287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"263.7"	""	"282.4"	""	"256.8"	""	"259.6"	""	"273.0"	"306.9"	""	"286"	"28"	"31.000"	"24.000"	"0.0206697887216668"	""	"0.0004166"	"0.002172"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEALVAK"	"[K].aLEALVAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"424.94781"	"1272.82889"	"1272.82914"	"-0.20"	"-0.00008"	"8/56"	"8"	"56"	"3873631.02764893"	"HCD"	"MS2"	"4.806915"	"195.4"	"100.000"	"48.3394"	"14168"	"14168"	"14144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.3"	""	"304.4"	""	"320.2"	""	"278.6"	""	"319.1"	"336.3"	""	"286"	"30"	"31.000"	"24.000"	"0.0149051392403243"	""	"0.0004166"	"0.002356"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLINK"	"[K].vLDLINk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"636.91821"	"1272.82915"	"1272.82914"	"0.00"	"0.00000"	"12/50"	"12"	"50"	"24483025.9515381"	"HCD"	"MS2"	"13.86692"	"921.7"	"58.643"	"56.1354"	"17325"	"17325"	"17307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1227.8"	""	"1414.7"	""	"1057.1"	""	"1544.8"	""	"1812.5"	"1688.3"	""	"286"	"36"	"31.000"	"24.000"	"0.00336772047597129"	""	"0.001217"	"0.01758"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLINK"	"[K].vLDLINk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"636.91827"	"1272.82927"	"1272.82914"	"0.10"	"0.00006"	"12/50"	"12"	"50"	"8820821.28112793"	"HCD"	"MS2"	"4.024874"	"498.4"	"84.068"	"56.4448"	"17452"	"17452"	"17435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"633.7"	""	"752.2"	""	"569.5"	""	"806.3"	"2.5"	"1021.5"	"943.9"	""	"282"	"36"	"31.000"	"24.000"	"0.00340579977656737"	""	"0.0006037"	"0.003703"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEALVAK"	"[K].aLEALVAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"636.91827"	"1272.82927"	"1272.82914"	"0.10"	"0.00006"	"7/56"	"7"	"56"	"10014250.0089111"	"HCD"	"MS2"	"9.628981"	"679.4"	"100.000"	"48.7890"	"14400"	"14400"	"14383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"952.1"	""	"986.2"	""	"1049.5"	""	"955.4"	""	"1221.4"	"1275.5"	""	"282"	"46"	"31.000"	"24.000"	"0.000351737856498957"	""	"0.0001889"	"0.0007134"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEALVAK"	"[K].aLEALVAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"636.91846"	"1272.82964"	"1272.82914"	"0.39"	"0.00025"	"7/56"	"7"	"56"	"8728247.70428467"	"HCD"	"MS2"	"31.56474"	"659.7"	"100.000"	"48.2154"	"14117"	"14117"	"14096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"974.2"	""	"965.0"	""	"936.2"	""	"1021.5"	"10.0"	"1156.9"	"1182.2"	""	"252"	"44"	"31.000"	"24.000"	"0.000544967427104111"	"22"	"0.0001889"	"0.001012"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEALVAK"	"[K].aLEALVAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"636.91876"	"1272.83025"	"1272.82914"	"0.87"	"0.00055"	"7/56"	"7"	"56"	"9888088.72143555"	"HCD"	"MS2"	"9.595092"	"653.2"	"100.000"	"48.5236"	"14243"	"14243"	"14224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"966.6"	""	"940.4"	""	"981.0"	""	"898.2"	""	"1162.1"	"1240.6"	""	"252"	"46"	"31.000"	"24.000"	"0.000320900611825715"	"24"	"0.0003571"	"0.001493"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEALVAK"	"[K].aLEALVAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"636.91919"	"1272.83110"	"1272.82914"	"1.54"	"0.00098"	"7/56"	"7"	"56"	"9761938.67248535"	"HCD"	"MS2"	"35.88502"	"682.8"	"100.000"	"48.4948"	"14279"	"14279"	"14255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1035.5"	""	"991.2"	""	"973.6"	""	"998.0"	"9.7"	"1222.4"	"1234.3"	""	"252"	"45"	"31.000"	"24.000"	"0.000365906854462521"	"23"	"0.0001889"	"0.0009608"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.36432"	"1273.72136"	"1273.72263"	"-1.00"	"-0.00063"	"6/50"	"6"	"50"	"8154333.4876709"	"HCD"	"MS2"	"0"	"483.3"	"100.000"	"30.0511"	"6753"	"6753"	"6729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"709.4"	""	"690.1"	""	"805.9"	""	"827.9"	""	"757.5"	"780.5"	""	"852"	"19"	"36.000"	"29.000"	"0.577310689661542"	"14"	"0.002456"	"0.03625"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.36438"	"1273.72148"	"1273.72263"	"-0.90"	"-0.00057"	"6/50"	"6"	"50"	"1198878.39215088"	"HCD"	"MS2"	"0"	"101.1"	"100.000"	"31.5323"	"7317"	"7317"	"7286"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.4"	""	"147.7"	""	"130.3"	""	"130.8"	"3.0"	"190.6"	"198.7"	""	"852"	"20"	"36.000"	"29.000"	"0.419188731054243"	"14"	"0.00109"	"0.0147"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.36462"	"1273.72197"	"1273.72263"	"-0.52"	"-0.00033"	"6/50"	"6"	"50"	"1310028.91003418"	"HCD"	"MS2"	"18.49642"	"98.2"	"100.000"	"30.6973"	"7018"	"7018"	"6992"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.0"	""	"128.4"	""	"125.2"	""	"132.1"	""	"188.5"	"205.4"	""	"856"	"18"	"36.000"	"29.000"	"0.650794342725509"	"14"	"0.001783"	"0.02494"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.36469"	"1273.72209"	"1273.72263"	"-0.42"	"-0.00027"	"6/50"	"6"	"50"	"1551984.49200439"	"HCD"	"MS2"	"0"	"119.3"	"100.000"	"30.2754"	"6804"	"6804"	"6778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.4"	""	"200.0"	""	"165.1"	""	"137.5"	""	"206.8"	"209.3"	""	"856"	"20"	"36.000"	"29.000"	"0.457555488307298"	"14"	"0.006001"	"0.206"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.36487"	"1273.72246"	"1273.72263"	"-0.13"	"-0.00009"	"6/50"	"6"	"50"	"7789062.51074219"	"HCD"	"MS2"	"0"	"464.0"	"100.000"	"29.9726"	"6680"	"6680"	"6650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"682.9"	""	"683.3"	""	"755.5"	""	"806.5"	""	"724.4"	"737.2"	""	"856"	"18"	"36.000"	"29.000"	"0.748934382731354"	"14"	"0.001718"	"0.02352"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.36499"	"1273.72270"	"1273.72263"	"0.06"	"0.00004"	"6/50"	"6"	"50"	"1426179.46966553"	"HCD"	"MS2"	"18.1924"	"99.9"	"100.000"	"30.5939"	"6935"	"6935"	"6904"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.8"	""	"136.4"	""	"137.3"	""	"120.3"	"0.5"	"187.9"	"198.3"	""	"848"	"19"	"36.000"	"29.000"	"0.526460578419182"	"14"	"0.002297"	"0.03385"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.36511"	"1273.72295"	"1273.72263"	"0.25"	"0.00016"	"6/50"	"6"	"50"	"1734318.1270752"	"HCD"	"MS2"	"0"	"123.6"	"100.000"	"30.3627"	"6881"	"6881"	"6854"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"218.8"	""	"194.4"	""	"163.3"	""	"147.6"	"0.3"	"212.0"	"233.2"	""	"840"	"19"	"36.000"	"29.000"	"0.503789707322739"	"14"	"0.002829"	"0.04688"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.36517"	"1273.72307"	"1273.72263"	"0.34"	"0.00022"	"6/50"	"6"	"50"	"1227111.99505615"	"HCD"	"MS2"	"0"	"97.3"	"100.000"	"30.9468"	"7077"	"7077"	"7048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.8"	""	"129.5"	""	"108.7"	""	"128.0"	""	"184.6"	"219.1"	""	"840"	"20"	"36.000"	"29.000"	"0.398335754586376"	"14"	"0.001966"	"0.02897"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIYASSK"	"[K].mIYASSk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3;Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"P45592; Q7M0E3"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3; Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.36627"	"1273.72527"	"1273.72263"	"2.07"	"0.00132"	"6/50"	"6"	"50"	"1307915.86376953"	"HCD"	"MS2"	"0"	"98.8"	"100.000"	"31.0592"	"7165"	"7165"	"7136"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.6"	""	"136.5"	""	"131.0"	""	"118.2"	"0.9"	"195.9"	"207.4"	""	"823"	"17"	"36.000"	"29.000"	"0.735139637051619"	"14"	"0.005134"	"0.1566"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFIPQLLSR"	"[K].aFIPQLLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.39441"	"1273.78154"	"1273.78297"	"-1.12"	"-0.00072"	"5/72"	"5"	"72"	"3189766.49139404"	"HCD"	"MS2"	"57.46844"	"157.3"	"100.000"	"59.0961"	"18531"	"18531"	"18505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.5"	""	"206.2"	""	"223.6"	""	"256.2"	"1.1"	"268.4"	"286.1"	""	"704"	"17"	"35.000"	"28.000"	"0.779009337781184"	"14"	"0.003286"	"0.07023"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFIPQLLSR"	"[K].aFIPQLLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"637.39520"	"1273.78313"	"1273.78297"	"0.12"	"0.00008"	"6/72"	"6"	"72"	"3510955.68566895"	"HCD"	"MS2"	"26.91211"	"162.8"	"100.000"	"59.2676"	"18654"	"18654"	"18629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"249.9"	""	"219.3"	""	"227.9"	""	"253.4"	""	"288.2"	"303.4"	""	"630"	"19"	"34.000"	"27.000"	"0.428855074976774"	"15"	"0.0006737"	"0.006423"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVFRPGLR"	"[R].iSVFRPGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P28042"	"Single-stranded DNA-binding protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ssbp1 PE=1 SV=2"	"P28042"	"Single-stranded DNA-binding protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ssbp1 PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"425.26944"	"1273.79377"	"1273.79421"	"-0.35"	"-0.00015"	"8/72"	"8"	"72"	"3246434.8850708"	"HCD"	"MS2"	"16.39058"	"172.6"	"94.315"	"37.3722"	"9699"	"9699"	"9672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"214.8"	""	"235.3"	""	"225.6"	""	"296.3"	""	"314.2"	"354.5"	""	"437"	"8"	"33.000"	"26.000"	"3.8146214041313"	"16"	"0.0003839"	"0.001653"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVFRPGLR"	"[R].iSVFRPGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P28042"	"Single-stranded DNA-binding protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ssbp1 PE=1 SV=2"	"P28042"	"Single-stranded DNA-binding protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ssbp1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"425.26956"	"1273.79413"	"1273.79421"	"-0.06"	"-0.00002"	"8/72"	"8"	"72"	"3070883.28259277"	"HCD"	"MS2"	"14.75111"	"178.9"	"100.000"	"37.4815"	"9787"	"9787"	"9761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.7"	""	"236.3"	""	"234.7"	""	"317.7"	""	"335.9"	"363.8"	""	"439"	"8"	"33.000"	"26.000"	"3.54351703223413"	"15"	"0.000523"	"0.002876"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALELLK"	"[K].eALELLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.0556"	"0.0000"	"1"	"1"	"1"	"637.40936"	"1273.81145"	"1273.81316"	"-1.34"	"-0.00086"	"12/54"	"12"	"54"	"21710491.7368164"	"HCD"	"MS2"	"8.064896"	"622.5"	"37.158"	"50.3538"	"15033"	"15033"	"15020"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"982.6"	""	"876.1"	""	"879.0"	""	"993.7"	""	"1082.1"	"1078.2"	""	"439"	"36"	"33.000"	"26.000"	"0.00612963373151595"	""	"0.001454"	"0.01972"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EALELLK"	"[K].eALELLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0312"	"2"	"2"	"2"	"637.40973"	"1273.81218"	"1273.81316"	"-0.77"	"-0.00049"	"5/54"	"5"	"54"	"3619343.52697754"	"HCD"	"MS2"	"45.03933"	"313.1"	"100.000"	"50.4098"	"15005"	"15005"	"14984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.1"	""	"405.0"	""	"432.6"	""	"523.6"	""	"575.2"	"592.6"	""	"431"	"31"	"33.000"	"26.000"	"0.0180072450428834"	""	"0.0001889"	"0.0006942"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"425.27872"	"1273.82160"	"1273.82439"	"-2.19"	"-0.00093"	"12/70"	"12"	"70"	"13524924.9918213"	"HCD"	"MS2"	"33.91647"	"474.0"	"50.306"	"29.2803"	"6396"	"6396"	"6374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"563.1"	""	"598.5"	""	"647.9"	""	"841.6"	""	"950.7"	"900.2"	""	"349"	"13"	"32.000"	"25.000"	"0.878608562334895"	"14"	"0.0006037"	"0.006018"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.9231"	"0.0000"	"1"	"2"	"2"	"425.27872"	"1273.82160"	"1273.82439"	"-2.19"	"-0.00093"	"12/70"	"12"	"70"	"13524924.9918213"	"HCD"	"MS2"	"33.91647"	"474.0"	"50.306"	"29.2803"	"6396"	"6396"	"6374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"563.1"	""	"598.5"	""	"647.9"	""	"841.6"	""	"950.7"	"900.2"	""	"349"	"13"	"32.000"	"25.000"	"0.878608562334895"	"14"	"0.0006037"	"0.006018"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.0455"	"0.0000"	"1"	"1"	"1"	"637.41492"	"1273.82256"	"1273.82439"	"-1.44"	"-0.00092"	"7/70"	"7"	"70"	"1187739.22290039"	"HCD"	"MS2"	"0"	"99.3"	"100.000"	"29.2457"	"6382"	"6382"	"6358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.0"	""	"115.3"	""	"122.9"	""	"196.4"	""	"195.3"	"191.9"	""	"349"	"44"	"32.000"	"25.000"	"0.00062057665090288"	"25"	"0.0001308"	"0.0002642"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	""	"0.0455"	"2"	"2"	"2"	"637.41492"	"1273.82256"	"1273.82439"	"-1.44"	"-0.00092"	"7/70"	"7"	"70"	"1187739.22290039"	"HCD"	"MS2"	"0"	"99.3"	"100.000"	"29.2457"	"6382"	"6382"	"6358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.0"	""	"115.3"	""	"122.9"	""	"196.4"	""	"195.3"	"191.9"	""	"349"	"42"	"32.000"	"25.000"	"0.00105146647769975"	"25"	"0.0001308"	"0.0002665"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTVAGLAGK"	"[K].vTVAGLAGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"425.27914"	"1273.82288"	"1273.82439"	"-1.19"	"-0.00050"	"6/64"	"6"	"64"	"12316557.1622314"	"HCD"	"MS2"	"11.64205"	"588.6"	"100.000"	"40.8734"	"11132"	"11132"	"11109"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"689.0"	""	"656.4"	""	"723.8"	""	"1019.0"	""	"1177.6"	"1338.6"	""	"349"	"26"	"32.000"	"25.000"	"0.0488422240276197"	"23"	"0.0001889"	"0.000421"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAK.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"637.41522"	"1273.82317"	"1273.82439"	"-0.96"	"-0.00061"	"7/70"	"7"	"70"	"2094268.6685791"	"HCD"	"MS2"	"15.10201"	"92.1"	"100.000"	"28.0735"	"5981"	"5981"	"5953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.9"	""	"106.0"	""	"105.9"	""	"172.5"	""	"176.2"	"188.8"	""	"334"	"30"	"32.000"	"25.000"	"0.0172868741835451"	"20"	"0.0004166"	"0.002486"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTVAGLAGK"	"[K].vTVAGLAGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"637.41547"	"1273.82366"	"1273.82439"	"-0.58"	"-0.00037"	"8/64"	"8"	"64"	"7282439.54772949"	"HCD"	"MS2"	"17.38572"	"522.4"	"100.000"	"41.0202"	"11192"	"11192"	"11173"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"558.2"	""	"582.1"	""	"653.4"	""	"915.7"	"1.6"	"1119.2"	"1135.1"	""	"334"	"49"	"32.000"	"25.000"	"0.000231055585288287"	""	"0.0001859"	"0.0003176"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAK.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"637.41553"	"1273.82378"	"1273.82439"	"-0.48"	"-0.00031"	"7/70"	"7"	"70"	"2292885.59692383"	"HCD"	"MS2"	"0"	"91.3"	"100.000"	"27.9873"	"5911"	"5911"	"5884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.7"	""	"105.9"	""	"112.7"	""	"162.5"	""	"194.1"	"174.7"	""	"334"	"30"	"32.000"	"25.000"	"0.0165850380086296"	"23"	"0.0003839"	"0.001938"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTVAGLAGK"	"[K].vTVAGLAGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"425.27963"	"1273.82434"	"1273.82439"	"-0.04"	"-0.00002"	"6/64"	"6"	"64"	"11523701.3486328"	"HCD"	"MS2"	"10.50665"	"507.0"	"100.000"	"41.0591"	"11252"	"11252"	"11229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"588.4"	""	"575.1"	""	"643.9"	""	"845.2"	""	"1014.0"	"1157.2"	""	"339"	"28"	"32.000"	"25.000"	"0.0297968052565998"	"24"	"0.0001889"	"0.0003905"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.0426"	"0.0000"	"1"	"1"	"1"	"637.41626"	"1273.82524"	"1273.82439"	"0.67"	"0.00042"	"7/70"	"7"	"70"	"736690.259155273"	"HCD"	"MS2"	"0"	"62.3"	"100.000"	"29.2121"	"6410"	"6410"	"6396"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.1"	""	"64.4"	""	"78.7"	""	"117.8"	""	"122.2"	"130.5"	""	"288"	"47"	"31.000"	"24.000"	"0.000285997668099461"	"24"	"0"	"0.0001327"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	""	"0.0426"	"2"	"2"	"2"	"637.41626"	"1273.82524"	"1273.82439"	"0.67"	"0.00042"	"7/70"	"7"	"70"	"736690.259155273"	"HCD"	"MS2"	"0"	"62.3"	"100.000"	"29.2121"	"6410"	"6410"	"6396"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.1"	""	"64.4"	""	"78.7"	""	"117.8"	""	"122.2"	"130.5"	""	"288"	"45"	"31.000"	"24.000"	"0.000483462164509855"	"24"	"0"	"0.0001321"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFVSFER"	"[K].gFGFVSFER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"637.83905"	"1274.67082"	"1274.67309"	"-1.78"	"-0.00113"	"7/68"	"7"	"68"	"3760523.46038818"	"HCD"	"MS2"	"34.22162"	"198.1"	"100.000"	"54.1533"	"16515"	"16515"	"16493"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.6"	""	"262.7"	""	"275.0"	""	"318.5"	""	"393.8"	"367.2"	""	"708"	"10"	"35.000"	"28.000"	"3.36514096954324"	"14"	"0.000523"	"0.002844"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFVSFER"	"[K].gFGFVSFER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"637.84009"	"1274.67290"	"1274.67309"	"-0.15"	"-0.00009"	"7/68"	"7"	"68"	"3325762.34326172"	"HCD"	"MS2"	"25.30422"	"177.7"	"100.000"	"54.7714"	"16767"	"16767"	"16752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.8"	""	"232.4"	""	"255.8"	""	"289.9"	"4.8"	"317.6"	"339.5"	""	"699"	"20"	"35.000"	"28.000"	"0.362616181328395"	"16"	"0.0001889"	"0.0006143"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFVSFER"	"[K].gFGFVSFER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.84009"	"1274.67290"	"1274.67309"	"-0.15"	"-0.00009"	"7/68"	"7"	"68"	"4439339.16418457"	"HCD"	"MS2"	"32.67406"	"217.8"	"100.000"	"54.4030"	"16670"	"16670"	"16651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.0"	""	"283.5"	""	"298.9"	""	"351.5"	""	"416.8"	"403.6"	""	"699"	"14"	"35.000"	"28.000"	"1.49433228709979"	"13"	"0.0001889"	"0.0009875"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFVSFER"	"[K].gFGFVSFER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"637.84021"	"1274.67314"	"1274.67309"	"0.04"	"0.00003"	"7/68"	"7"	"68"	"2991289.84552002"	"HCD"	"MS2"	"28.31361"	"158.0"	"100.000"	"55.0395"	"16931"	"16931"	"16901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.3"	"2.7"	"199.6"	""	"218.8"	""	"275.2"	"5.0"	"288.1"	"315.2"	""	"697"	"11"	"35.000"	"28.000"	"3.04230521883257"	"15"	"0.0001889"	"0.0005861"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFVSFER"	"[K].gFGFVSFER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"637.84052"	"1274.67375"	"1274.67309"	"0.52"	"0.00033"	"7/68"	"7"	"68"	"5204808.72821045"	"HCD"	"MS2"	"31.07804"	"242.1"	"100.000"	"54.7066"	"16794"	"16794"	"16773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"328.5"	""	"344.6"	""	"335.9"	""	"385.0"	""	"449.6"	"452.2"	""	"708"	"23"	"35.000"	"28.000"	"0.194537469345599"	"15"	"0.0001889"	"0.001037"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFVSFER"	"[K].gFGFVSFER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"637.84070"	"1274.67412"	"1274.67309"	"0.81"	"0.00052"	"7/68"	"7"	"68"	"5376324.81433105"	"HCD"	"MS2"	"30.1186"	"261.9"	"100.000"	"54.4654"	"16642"	"16642"	"16624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"327.0"	""	"341.8"	""	"388.4"	""	"425.4"	""	"480.0"	"521.5"	""	"710"	"20"	"35.000"	"28.000"	"0.321535073318861"	"15"	"0.0001889"	"0.0009877"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLENEK"	"[R].aLLENEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"3"	"637.88904"	"1274.77080"	"1274.77202"	"-0.96"	"-0.00061"	"12/56"	"12"	"56"	"4678052.51635742"	"HCD"	"MS2"	"12.73386"	"402.9"	"100.000"	"35.1230"	"8819"	"8819"	"8794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"477.4"	""	"381.7"	""	"440.9"	""	"742.4"	""	"919.5"	"871.0"	""	"709"	"31"	"35.000"	"28.000"	"0.0257404561910762"	""	"0.0006037"	"0.003692"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLENEK"	"[R].aLLENEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"3"	"637.88947"	"1274.77165"	"1274.77202"	"-0.29"	"-0.00018"	"12/56"	"12"	"56"	"6108892.27398682"	"HCD"	"MS2"	"0"	"508.3"	"100.000"	"35.0035"	"8727"	"8727"	"8702"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"617.9"	""	"499.8"	""	"562.0"	""	"900.3"	"2.0"	"1145.3"	"1106.8"	""	"703"	"35"	"35.000"	"28.000"	"0.0117469556569179"	""	"0.0004557"	"0.00254"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFVAGVINR"	"[R].lGFVAGVINR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"637.89172"	"1274.77617"	"1274.77822"	"-1.61"	"-0.00103"	"9/76"	"9"	"76"	"2891655.24530029"	"HCD"	"MS2"	"29.82861"	"149.4"	"100.000"	"55.2517"	"16964"	"16964"	"16939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"188.8"	""	"204.0"	""	"211.8"	""	"253.4"	""	"258.8"	"299.8"	""	"689"	"30"	"35.000"	"28.000"	"0.0349292472386286"	"21"	"0.0001889"	"0.0005613"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFVAGVINR"	"[R].lGFVAGVINR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"637.89178"	"1274.77629"	"1274.77822"	"-1.51"	"-0.00096"	"9/76"	"9"	"76"	"2859216.04046631"	"HCD"	"MS2"	"52.43712"	"148.1"	"100.000"	"55.4553"	"17101"	"17101"	"17077"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.9"	""	"204.4"	""	"213.5"	""	"238.4"	"0.5"	"260.3"	"294.1"	""	"689"	"40"	"35.000"	"28.000"	"0.00314912011686501"	"23"	"0.0001308"	"0.0002799"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLLTNK"	"[K].nNLLTNk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"637.89410"	"1274.78093"	"1274.78326"	"-1.82"	"-0.00116"	"12/60"	"12"	"60"	"10385568.9420166"	"HCD"	"MS2"	"13.10081"	"778.4"	"100.000"	"33.5936"	"8153"	"8153"	"8135"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1046.8"	""	"907.5"	""	"954.5"	""	"1364.3"	"8.9"	"1569.6"	"1534.4"	""	"609"	"35"	"34.000"	"27.000"	"0.0104854553917437"	"25"	"0.0006037"	"0.004496"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLLTNK"	"[K].nNLLTNk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"637.89496"	"1274.78264"	"1274.78326"	"-0.48"	"-0.00031"	"6/60"	"6"	"60"	"1791603.62005615"	"HCD"	"MS2"	"0"	"183.7"	"100.000"	"33.9877"	"8357"	"8357"	"8337"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.5"	""	"209.3"	""	"234.2"	""	"327.9"	"5.3"	"380.5"	"356.7"	""	"596"	"7"	"34.000"	"27.000"	"5.93220655018182"	"14"	"0.0006037"	"0.005141"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVSSPLK"	"[R].wVSSPLk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"637.89502"	"1274.78276"	"1274.78728"	"-3.54"	"-0.00226"	"4/50"	"4"	"50"	"18743796.6739502"	"HCD"	"MS2"	"0"	"739.9"	"56.506"	"43.5026"	"12245"	"12245"	"12231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1066.3"	""	"900.4"	""	"1067.4"	""	"1252.8"	"2.1"	"1198.4"	"1518.8"	""	"596"	"21"	"34.000"	"27.000"	"0.257760439795157"	"27"	"0.001718"	"0.02342"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLLTNK"	"[K].nNLLTNk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"637.89502"	"1274.78276"	"1274.78326"	"-0.39"	"-0.00025"	"6/60"	"6"	"60"	"6290340.2869873"	"HCD"	"MS2"	"0"	"466.5"	"100.000"	"33.6097"	"8203"	"8203"	"8186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"648.3"	""	"531.4"	""	"562.9"	""	"830.8"	"1.7"	"920.1"	"930.5"	""	"596"	"29"	"34.000"	"27.000"	"0.0378631083352145"	"27"	"0.0006737"	"0.006552"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFPGAVPK"	"[K].tFPGAVPk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"637.89526"	"1274.78325"	"1274.78728"	"-3.16"	"-0.00201"	"10/56"	"10"	"56"	"8662926.44934082"	"HCD"	"MS2"	"24.56003"	"564.7"	"100.000"	"38.2243"	"10092"	"10092"	"10065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"708.2"	""	"726.3"	""	"808.1"	""	"935.6"	"3.3"	"1039.5"	"1133.4"	""	"709"	"24"	"35.000"	"28.000"	"0.13415789628221"	"27"	"0.0003839"	"0.001554"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFPGAVPK"	"[K].tFPGAVPk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"637.89563"	"1274.78398"	"1274.78728"	"-2.59"	"-0.00165"	"10/56"	"10"	"56"	"8236245.86932373"	"HCD"	"MS2"	"26.00525"	"552.5"	"100.000"	"38.1084"	"10001"	"10001"	"9975"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"757.6"	""	"700.2"	""	"792.9"	""	"917.2"	""	"983.0"	"1084.7"	""	"695"	"23"	"35.000"	"28.000"	"0.18704874942441"	"26"	"0.0003839"	"0.002067"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVSSPLK"	"[R].wVSSPLk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"637.89594"	"1274.78459"	"1274.78728"	"-2.11"	"-0.00134"	"6/50"	"6"	"50"	"19543496.7136841"	"HCD"	"MS2"	"0"	"954.5"	"66.517"	"43.2750"	"12103"	"12103"	"12085"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1452.9"	""	"1179.6"	""	"1370.0"	""	"1543.4"	""	"1552.9"	"1942.5"	""	"695"	"24"	"35.000"	"28.000"	"0.126460475054204"	""	"0.001058"	"0.01425"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVSSPLK"	"[R].wVSSPLk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.0667"	"0.0000"	"1"	"1"	"1"	"425.59979"	"1274.78482"	"1274.78728"	"-1.93"	"-0.00082"	"7/50"	"7"	"50"	"6733955.29003906"	"HCD"	"MS2"	"32.04171"	"314.8"	"100.000"	"43.5963"	"12283"	"12283"	"12258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"446.0"	""	"373.3"	""	"457.7"	""	"516.0"	""	"518.8"	"670.9"	""	"695"	"15"	"35.000"	"28.000"	"1.07635320647776"	"27"	"0.0006037"	"0.005545"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVSSPLK"	"[R].wVSSPLk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"425.59998"	"1274.78537"	"1274.78728"	"-1.50"	"-0.00064"	"7/50"	"7"	"50"	"6789454.23260498"	"HCD"	"MS2"	"32.82215"	"316.1"	"100.000"	"43.3553"	"12136"	"12136"	"12117"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"454.9"	""	"370.4"	""	"456.2"	""	"514.9"	""	"525.7"	"678.1"	""	"697"	"11"	"35.000"	"28.000"	"2.76823389801412"	"20"	"0.0007793"	"0.007285"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGK"	"[R].vTLELGGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"5"	"P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q66HF8; P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"425.60648"	"1274.80487"	"1274.80841"	"-2.77"	"-0.00118"	"9/60"	"9"	"60"	"9095131.14788818"	"HCD"	"MS2"	"39.87244"	"444.8"	"100.000"	"43.1658"	"12112"	"12112"	"12091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"662.8"	""	"686.2"	""	"694.7"	""	"679.5"	""	"683.4"	"804.9"	""	"544"	"23"	"34.000"	"27.000"	"0.131391994154818"	"19"	"0.0004166"	"0.002164"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGK"	"[R].vTLELGGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"5"	"P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q66HF8; P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"425.60669"	"1274.80552"	"1274.80841"	"-2.27"	"-0.00096"	"9/60"	"9"	"60"	"8898406.17736816"	"HCD"	"MS2"	"0"	"450.5"	"100.000"	"42.9072"	"11961"	"11961"	"11945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"653.8"	""	"676.6"	""	"723.3"	""	"676.5"	""	"716.2"	"822.9"	""	"570"	"26"	"34.000"	"27.000"	"0.0724177221081552"	"21"	"0.0006037"	"0.004322"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGK"	"[R].vTLELGGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"5"	"P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q66HF8; P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"637.90680"	"1274.80632"	"1274.80841"	"-1.64"	"-0.00104"	"12/60"	"12"	"60"	"75038171.2861328"	"HCD"	"MS2"	"0"	"698.0"	"13.651"	"42.8959"	"11957"	"11957"	"11945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1035.9"	""	"1002.7"	""	"1077.7"	""	"1050.8"	""	"1099.4"	"1344.3"	""	"569"	"39"	"34.000"	"27.000"	"0.00331193855367285"	"24"	"0.0007076"	"0.00706"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGK"	"[R].vTLELGGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"5"	"P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q66HF8; P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"637.90680"	"1274.80632"	"1274.80841"	"-1.64"	"-0.00104"	"12/60"	"12"	"60"	"37599891.796875"	"HCD"	"MS2"	"0"	"1287.1"	"47.820"	"43.0605"	"12069"	"12069"	"12051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1956.0"	""	"1973.2"	""	"2035.0"	""	"1913.5"	""	"2006.0"	"2289.3"	""	"569"	"39"	"34.000"	"27.000"	"0.00348403308690907"	"23"	"0.0006037"	"0.003686"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGK"	"[R].vTLELGGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"5"	"P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q66HF8; P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"637.90698"	"1274.80669"	"1274.80841"	"-1.35"	"-0.00086"	"12/60"	"12"	"60"	"11138148.3398438"	"HCD"	"MS2"	"0"	"529.2"	"66.066"	"43.3330"	"12177"	"12177"	"12166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"755.1"	""	"800.1"	""	"821.4"	""	"776.5"	""	"874.9"	"980.7"	""	"569"	"39"	"34.000"	"27.000"	"0.00336575322603809"	"24"	"0.0001889"	"0.001101"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIAEATK"	"[R].aLIAEATk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"637.90729"	"1274.80730"	"1274.80841"	"-0.87"	"-0.00056"	"7/60"	"7"	"60"	"14611377.0593872"	"HCD"	"MS2"	"0"	"945.2"	"98.004"	"38.0225"	"10009"	"10009"	"9985"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1439.4"	""	"1154.4"	""	"1452.7"	""	"1488.6"	""	"1477.7"	"1934.1"	""	"547"	"48"	"34.000"	"27.000"	"0.000393511411152974"	"26"	"0.0002277"	"0.001245"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIAEATK"	"[R].aLIAEATk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"637.90741"	"1274.80754"	"1274.80841"	"-0.68"	"-0.00043"	"7/60"	"7"	"60"	"14133324.0213013"	"HCD"	"MS2"	"0"	"892.3"	"90.935"	"37.9179"	"9923"	"9923"	"9895"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1359.4"	""	"1091.2"	""	"1408.7"	""	"1406.9"	""	"1392.2"	"1792.1"	""	"547"	"48"	"34.000"	"27.000"	"0.000390802497652787"	"26"	"0.0001889"	"0.0007826"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLGETGK"	"[R].vLLGETGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"637.90759"	"1274.80791"	"1274.80841"	"-0.39"	"-0.00025"	"7/58"	"7"	"58"	"12476248.192688"	"HCD"	"MS2"	"0"	"824.3"	"100.000"	"39.6864"	"10692"	"10692"	"10670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1156.5"	""	"1398.6"	""	"1451.5"	""	"1430.4"	"1.7"	"1327.7"	"1017.5"	""	"545"	"46"	"34.000"	"27.000"	"0.000725047578795175"	"24"	"0.0001889"	"0.0007848"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLGETGK"	"[R].vLLGETGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"637.90784"	"1274.80840"	"1274.80841"	"-0.01"	"-0.00001"	"7/58"	"7"	"58"	"12471993.4729004"	"HCD"	"MS2"	"2.72907"	"856.3"	"97.210"	"39.5839"	"10607"	"10607"	"10582"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1207.4"	""	"1440.4"	""	"1516.0"	""	"1480.4"	"0.0"	"1391.5"	"1050.5"	""	"545"	"48"	"34.000"	"27.000"	"0.000484581139235606"	"25"	"0.0001889"	"0.0007367"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSGVVTK"	"[R].iLSGVVTk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"425.61926"	"1274.84323"	"1274.84479"	"-1.22"	"-0.00052"	"7/64"	"7"	"64"	"2041373.08636475"	"HCD"	"MS2"	"41.98058"	"110.4"	"100.000"	"45.1954"	"12935"	"12935"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.3"	""	"166.8"	""	"178.7"	""	"179.0"	"5.2"	"200.1"	"173.9"	""	"220"	"26"	"30.000"	"23.000"	"0.0276307507466054"	"20"	"0.001058"	"0.01315"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSLIGSK"	"[R].lVSLIGSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.92554"	"1274.84380"	"1274.84479"	"-0.78"	"-0.00050"	"10/64"	"10"	"64"	"44202403.6101074"	"HCD"	"MS2"	"47.52985"	"515.5"	"23.016"	"52.6986"	"15941"	"15941"	"15922"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"686.2"	""	"571.3"	""	"627.4"	""	"901.2"	""	"1031.0"	"1076.3"	""	"218"	"15"	"30.000"	"23.000"	"0.319467363732285"	"13"	"0.00109"	"0.01468"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSGVVTK"	"[R].iLSGVVTk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"637.92566"	"1274.84404"	"1274.84479"	"-0.59"	"-0.00038"	"7/64"	"7"	"64"	"18149727.5751343"	"HCD"	"MS2"	"35.03687"	"1177.4"	"100.000"	"45.0208"	"12863"	"12863"	"12843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1604.5"	""	"1574.8"	""	"1689.3"	""	"2033.2"	""	"2215.0"	"2038.4"	""	"218"	"35"	"30.000"	"23.000"	"0.00328417656636287"	"20"	"0.0003839"	"0.001993"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSLIGSK"	"[R].lVSLIGSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"637.92596"	"1274.84465"	"1274.84479"	"-0.11"	"-0.00007"	"7/64"	"7"	"64"	"35879304.2561035"	"HCD"	"MS2"	"46.87415"	"426.2"	"22.468"	"52.9707"	"16103"	"16103"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"539.9"	""	"499.7"	""	"503.6"	""	"724.9"	""	"880.7"	"905.1"	""	"218"	"20"	"30.000"	"23.000"	"0.103854781878578"	"16"	"0.0006037"	"0.005032"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSGVVTK"	"[R].iLSGVVTk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"637.92609"	"1274.84490"	"1274.84479"	"0.08"	"0.00005"	"11/64"	"11"	"64"	"15067672.2252808"	"HCD"	"MS2"	"40.09652"	"1025.7"	"100.000"	"44.7633"	"12709"	"12709"	"12688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1310.3"	""	"1382.8"	""	"1491.7"	""	"1777.7"	""	"1979.4"	"1782.7"	""	"218"	"34"	"30.000"	"23.000"	"0.00452299906471456"	"20"	"0.0004166"	"0.00214"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FWTHWNR"	"[K].fWTHWNR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXT8"	"Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1"	"Q6AXT8"	"Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"425.89032"	"1275.65641"	"1275.65844"	"-1.60"	"-0.00068"	"6/50"	"6"	"50"	"3885729.31732178"	"HCD"	"MS2"	"53.87315"	"167.5"	"100.000"	"39.8220"	"10705"	"10705"	"10677"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.3"	"2.5"	"231.4"	""	"245.4"	""	"269.7"	""	"291.6"	"315.6"	""	"662"	"7"	"35.000"	"28.000"	"6.604318262547"	"13"	"0.0006037"	"0.00427"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNmLDAVR.[E]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"638.36749"	"1275.72771"	"1275.72922"	"-1.19"	"-0.00076"	"6/76"	"6"	"76"	"4637067.98742676"	"HCD"	"MS2"	"38.1456"	"258.5"	"100.000"	"40.1656"	"10886"	"10886"	"10861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.7"	""	"286.9"	""	"306.1"	""	"562.1"	""	"493.4"	"539.7"	""	"906"	"8"	"36.000"	"29.000"	"6.4728896320553"	"18"	"0.002829"	"0.04622"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVLESLVGR"	"[K].sSVLESLVGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"638.37665"	"1275.74602"	"1275.74698"	"-0.75"	"-0.00048"	"9/82"	"9"	"82"	"3274379.67321777"	"HCD"	"MS2"	"14.18259"	"207.3"	"100.000"	"50.7639"	"15200"	"15200"	"15174"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"273.4"	""	"288.2"	""	"297.6"	""	"313.0"	""	"390.0"	"404.4"	""	"836"	"44"	"36.000"	"29.000"	"0.00159652705211139"	"22"	"0"	"0.0001183"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGPGMTK"	"[K].nLGPGMTk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"638.37775"	"1275.74822"	"1275.74951"	"-1.02"	"-0.00065"	"7/70"	"7"	"70"	"21131146.5024414"	"HCD"	"MS2"	"36.13994"	"537.1"	"31.018"	"33.7290"	"8208"	"8208"	"8189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"765.2"	""	"758.3"	""	"745.4"	""	"788.0"	""	"980.8"	"1055.0"	""	"790"	"28"	"35.000"	"28.000"	"0.0618866672692718"	"24"	"0.004913"	"0.1478"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVLESLVGR"	"[K].sSVLESLVGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"638.37787"	"1275.74846"	"1275.74698"	"1.16"	"0.00074"	"8/82"	"8"	"82"	"3205325.7288208"	"HCD"	"MS2"	"0"	"208.0"	"100.000"	"50.5222"	"15051"	"15051"	"15026"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"287.9"	"2.9"	"266.1"	""	"313.5"	""	"326.6"	""	"393.7"	"383.3"	""	"790"	"43"	"35.000"	"28.000"	"0.00193017681940419"	"23"	"0"	"0.0001195"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGPGMTK"	"[K].nLGPGMTk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"638.37787"	"1275.74846"	"1275.74951"	"-0.83"	"-0.00053"	"6/70"	"6"	"70"	"24141220.8305664"	"HCD"	"MS2"	"39.05016"	"537.8"	"26.943"	"33.7725"	"8269"	"8269"	"8252"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"756.1"	""	"736.6"	""	"749.6"	""	"774.8"	""	"1017.1"	"1075.2"	""	"790"	"24"	"35.000"	"28.000"	"0.145076508696743"	"23"	"0.004346"	"0.1207"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLNPILFR"	"[K].sSLNPILFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"638.38458"	"1275.76189"	"1275.76224"	"-0.27"	"-0.00017"	"8/76"	"8"	"76"	"9994338.07672119"	"HCD"	"MS2"	"32.48059"	"568.6"	"100.000"	"49.5779"	"14719"	"14719"	"14702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"723.8"	""	"733.1"	""	"691.2"	""	"989.3"	"2.6"	"1137.5"	"1118.6"	""	"690"	"43"	"35.000"	"28.000"	"0.00162861749235939"	"28"	"0.0001859"	"0.0003214"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLNPILFR"	"[K].sSLNPILFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"638.38477"	"1275.76225"	"1275.76224"	"0.01"	"0.00001"	"8/76"	"8"	"76"	"9379823.03057861"	"HCD"	"MS2"	"33.23324"	"530.2"	"100.000"	"49.3006"	"14561"	"14561"	"14543"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"722.4"	""	"647.0"	""	"654.8"	""	"887.3"	""	"1085.6"	"1038.2"	""	"686"	"44"	"35.000"	"28.000"	"0.00125399013523302"	"28"	"0.0001889"	"0.0005225"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQSTAGK"	"[K].iLQSTAGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"638.40472"	"1275.80217"	"1275.80366"	"-1.16"	"-0.00074"	"7/68"	"7"	"68"	"3897221.03491211"	"HCD"	"MS2"	"28.13083"	"319.3"	"100.000"	"34.5381"	"8536"	"8536"	"8515"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"496.3"	""	"436.1"	""	"533.6"	""	"436.4"	""	"580.4"	"542.6"	""	"467"	"35"	"33.000"	"26.000"	"0.0068436357276595"	""	"0.0001889"	"0.0006368"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQSTAGK"	"[K].iLQSTAGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"638.40497"	"1275.80266"	"1275.80366"	"-0.78"	"-0.00050"	"7/68"	"7"	"68"	"3792191.16497803"	"HCD"	"MS2"	"18.90723"	"316.4"	"100.000"	"34.6137"	"8610"	"8610"	"8586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"472.4"	""	"449.9"	""	"528.3"	""	"471.8"	""	"555.3"	"519.2"	""	"456"	"32"	"33.000"	"26.000"	"0.0132719533651758"	""	"0.0001889"	"0.0005722"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDFVIPK"	"[K].vDFVIPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"638.40747"	"1275.80766"	"1275.80768"	"-0.01"	"-0.00001"	"5/48"	"5"	"48"	"2935760.8805542"	"HCD"	"MS2"	"55.39196"	"195.7"	"100.000"	"54.8772"	"16811"	"16811"	"16780"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.6"	"2.6"	"223.6"	""	"241.7"	""	"352.1"	""	"399.8"	"432.5"	""	"393"	"16"	"32.000"	"25.000"	"0.516847660407442"	"20"	"0.00103"	"0.01193"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDFVIPK"	"[K].vDFVIPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"638.40765"	"1275.80803"	"1275.80768"	"0.27"	"0.00018"	"5/48"	"5"	"48"	"2599840.89447021"	"HCD"	"MS2"	"57.35723"	"161.6"	"100.000"	"55.1107"	"16960"	"16960"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.7"	""	"196.9"	""	"209.2"	""	"285.2"	""	"314.0"	"338.2"	""	"402"	"17"	"33.000"	"26.000"	"0.41418661256727"	"20"	"0.0008453"	"0.008046"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQANMGAK"	"[R].vQANMGAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"638.87366"	"1276.74004"	"1276.74476"	"-3.70"	"-0.00236"	"7/70"	"7"	"70"	"980230.393859863"	"HCD"	"MS2"	"0"	"88.0"	"100.000"	"29.8310"	"6663"	"6663"	"6636"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.0"	""	"140.5"	""	"126.6"	""	"114.5"	""	"144.1"	"152.6"	""	"862"	"30"	"36.000"	"29.000"	"0.0400384512702152"	"28"	"0.0001859"	"0.0003153"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQANMGAK"	"[R].vQANMGAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"3"	"638.87427"	"1276.74126"	"1276.74476"	"-2.74"	"-0.00175"	"7/70"	"7"	"70"	"759659.969360352"	"HCD"	"MS2"	"0"	"63.3"	"100.000"	"29.7065"	"6571"	"6571"	"6544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.3"	""	"105.1"	""	"89.1"	""	"75.2"	"0.5"	"101.3"	"110.7"	""	"832"	"13"	"36.000"	"29.000"	"2.30724296590491"	"23"	"0.0001889"	"0.0005409"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"638.87891"	"1276.75054"	"1276.75129"	"-0.59"	"-0.00038"	"7/64"	"7"	"64"	"1837534.0302124"	"HCD"	"MS2"	"57.28493"	"171.2"	"100.000"	"32.7162"	"7844"	"7844"	"7814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"275.3"	""	"215.1"	""	"228.1"	""	"284.5"	""	"309.7"	"309.1"	""	"825"	"15"	"36.000"	"29.000"	"1.17604503534536"	"18"	"0.0004166"	"0.002122"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"638.88513"	"1276.76299"	"1276.76654"	"-2.79"	"-0.00178"	"6/52"	"6"	"52"	"29270099.0187988"	"HCD"	"MS2"	"0"	"643.5"	"29.769"	"41.7310"	"11484"	"11484"	"11467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"575.2"	""	"618.4"	""	"675.0"	""	"1415.8"	""	"1425.1"	"1416.4"	""	"733"	"31"	"35.000"	"28.000"	"0.0263071607750954"	"24"	"0.001217"	"0.01694"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"426.25964"	"1276.76438"	"1276.76654"	"-1.70"	"-0.00072"	"7/52"	"7"	"52"	"47930856.8529663"	"HCD"	"MS2"	"4.720624"	"2480.9"	"100.000"	"41.3457"	"11370"	"11370"	"11341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2504.3"	"60.8"	"2420.7"	""	"2470.3"	""	"5737.1"	""	"5336.8"	"5249.4"	""	"734"	"27"	"35.000"	"28.000"	"0.0675563324539106"	"19"	"0.001686"	"0.02312"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"638.88586"	"1276.76445"	"1276.76654"	"-1.64"	"-0.00105"	"3/52"	"3"	"52"	"76570.8936157227"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"98.8723"	"33852"	"33852"	"33848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"5.3"	""	"8.4"	""	"11.7"	""	"9.7"	"12.5"	""	"734"	"7"	"35.000"	"28.000"	"6.897092717668"	"17"	"0.003945"	"0.1005"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"638.88586"	"1276.76445"	"1276.76654"	"-1.64"	"-0.00105"	"6/52"	"6"	"52"	"303513822.730957"	"HCD"	"MS2"	"0"	"2592.3"	"11.692"	"41.1349"	"11239"	"11239"	"11221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2622.7"	""	"2505.3"	""	"2535.9"	""	"6230.4"	""	"5501.5"	"5442.2"	""	"734"	"31"	"35.000"	"28.000"	"0.0286857404283917"	"28"	"0.00551"	"0.1763"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"426.25974"	"1276.76465"	"1276.76654"	"-1.48"	"-0.00063"	"7/52"	"7"	"52"	"2876786.59320068"	"HCD"	"MS2"	"27.91692"	"157.5"	"100.000"	"41.9855"	"11632"	"11632"	"11602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.2"	""	"181.0"	""	"188.2"	""	"304.9"	"2.2"	"336.5"	"327.0"	""	"734"	"21"	"35.000"	"28.000"	"0.276481491890274"	"14"	"0.0005564"	"0.003571"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.88599"	"1276.76470"	"1276.76654"	"-1.45"	"-0.00092"	"4/52"	"4"	"52"	"90850.7114257813"	"HCD"	"MS2"	"6.722155"	"6.0"	"100.000"	"109.6138"	"36037"	"36037"	"36033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"9.1"	""	"6.7"	""	"10.7"	""	"12.7"	"12.2"	""	"734"	"9"	"35.000"	"28.000"	"5.101126156553"	"13"	"0.005262"	"0.1596"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"638.88605"	"1276.76482"	"1276.76654"	"-1.35"	"-0.00086"	"3/52"	"3"	"52"	"74015.6559448242"	"HCD"	"MS2"	"15.53382"	"5.8"	"100.000"	"102.6280"	"34760"	"34760"	"34755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"4.7"	""	"4.9"	""	"14.6"	""	"11.5"	"13.0"	""	"734"	"11"	"35.000"	"28.000"	"2.68328043638414"	"22"	"0.005072"	"0.1527"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"638.88605"	"1276.76482"	"1276.76654"	"-1.35"	"-0.00086"	"3/52"	"3"	"52"	"100467.117004395"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"98.9853"	"33883"	"33883"	"33877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"8.5"	""	"11.7"	""	"12.3"	""	"15.2"	"14.7"	""	"734"	"11"	"35.000"	"28.000"	"3.14532889199546"	"16"	"0.003818"	"0.09443"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VNATVWK"	"[].vnATVWk.[]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"3"	"638.88605"	"1276.76482"	"1276.76654"	"-1.35"	"-0.00086"	"3/58"	"3"	"58"	"100467.117004395"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"98.9853"	"33883"	"33883"	"33877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"8.5"	""	"11.7"	""	"12.3"	""	"15.2"	"14.7"	""	"734"	"11"	"35.000"	"28.000"	"3.14532889199546"	"16"	"0.003818"	"0.09444"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"426.25980"	"1276.76484"	"1276.76654"	"-1.34"	"-0.00057"	"7/52"	"7"	"52"	"97656103.6318359"	"HCD"	"MS2"	"5.434685"	"1058.1"	"24.074"	"41.1694"	"11254"	"11254"	"11237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1043.8"	"21.9"	"984.2"	""	"1041.7"	""	"2448.3"	""	"2256.0"	"2269.9"	""	"734"	"21"	"35.000"	"28.000"	"0.296938194998466"	"16"	"0.001454"	"0.01998"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"638.88611"	"1276.76494"	"1276.76654"	"-1.26"	"-0.00080"	"6/52"	"6"	"52"	"311788780.489746"	"HCD"	"MS2"	"0"	"2760.8"	"13.806"	"41.3205"	"11359"	"11359"	"11341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2816.9"	""	"2630.5"	""	"2718.2"	""	"6615.7"	""	"5821.8"	"5849.9"	""	"734"	"31"	"35.000"	"28.000"	"0.027081085245738"	"28"	"0.005975"	"0.201"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"426.25992"	"1276.76520"	"1276.76654"	"-1.05"	"-0.00045"	"7/52"	"7"	"52"	"61035242.6586914"	"HCD"	"MS2"	"3.75356"	"337.0"	"11.785"	"41.4580"	"11372"	"11372"	"11355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"299.3"	"7.9"	"304.9"	""	"332.2"	""	"741.3"	""	"791.0"	"732.6"	""	"734"	"26"	"35.000"	"28.000"	"0.0965308353025605"	"19"	"0.002165"	"0.03273"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"426.25995"	"1276.76529"	"1276.76654"	"-0.98"	"-0.00042"	"7/52"	"7"	"52"	"58959297.7167969"	"HCD"	"MS2"	"2.387152"	"562.7"	"20.684"	"41.6482"	"11493"	"11493"	"11474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"512.8"	"15.5"	"479.3"	""	"576.9"	""	"1232.9"	""	"1275.5"	"1270.2"	""	"726"	"25"	"35.000"	"28.000"	"0.121872753970193"	"17"	"0.0008731"	"0.009138"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.88629"	"1276.76531"	"1276.76654"	"-0.97"	"-0.00062"	"4/52"	"4"	"52"	"130642.047729492"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"99.3502"	"33989"	"33989"	"33982"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.5"	""	"8.1"	""	"8.0"	""	"14.2"	""	"14.8"	"18.9"	""	"726"	"17"	"35.000"	"28.000"	"0.719294310367251"	"14"	"0.003976"	"0.1017"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"638.88635"	"1276.76543"	"1276.76654"	"-0.87"	"-0.00056"	"4/52"	"4"	"52"	"117511.767456055"	"HCD"	"MS2"	"6.458877"	"7.7"	"100.000"	"101.0543"	"34422"	"34422"	"34418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.2"	""	"7.9"	""	"11.8"	""	"15.0"	""	"13.8"	"14.8"	""	"726"	"10"	"35.000"	"28.000"	"3.92560524321152"	"19"	"0.001879"	"0.02673"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.88635"	"1276.76543"	"1276.76654"	"-0.87"	"-0.00056"	"4/52"	"4"	"52"	"164516.154724121"	"HCD"	"MS2"	"15.51112"	"6.6"	"100.000"	"117.9370"	"37389"	"37389"	"37386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"7.8"	""	"7.2"	""	"11.7"	""	"14.0"	"14.3"	""	"726"	"15"	"35.000"	"28.000"	"1.06636682366204"	"13"	"0.009489"	"0.4213"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.88635"	"1276.76543"	"1276.76654"	"-0.87"	"-0.00056"	"4/52"	"4"	"52"	"169157.158752441"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"118.7031"	"37514"	"37514"	"37509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.8"	""	"7.2"	""	"9.6"	""	"15.3"	""	"18.3"	"14.2"	""	"726"	"10"	"35.000"	"28.000"	"3.25766652403772"	"13"	"0.007814"	"0.3101"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"638.88641"	"1276.76555"	"1276.76654"	"-0.78"	"-0.00050"	"6/52"	"6"	"52"	"165335.778137207"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"118.4472"	"37470"	"37470"	"37465"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"7.1"	""	"8.0"	""	"19.1"	""	"20.3"	"18.0"	""	"726"	"7"	"35.000"	"28.000"	"7.24280220333704"	"17"	"0.002711"	"0.04188"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.88647"	"1276.76567"	"1276.76654"	"-0.68"	"-0.00044"	"4/52"	"4"	"52"	"114377.413635254"	"HCD"	"MS2"	"15.88803"	"6.6"	"100.000"	"106.4637"	"35487"	"35487"	"35482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.2"	""	"5.7"	""	"11.2"	""	"11.3"	""	"14.4"	"13.2"	""	"726"	"19"	"35.000"	"28.000"	"0.442493224409727"	"14"	"0.003507"	"0.0791"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.88647"	"1276.76567"	"1276.76654"	"-0.68"	"-0.00044"	"4/52"	"4"	"52"	"123453.442260742"	"HCD"	"MS2"	"11.42919"	"7.5"	"100.000"	"98.5356"	"33762"	"33762"	"33756"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"7.1"	""	"9.2"	""	"14.2"	""	"14.7"	"19.5"	""	"726"	"10"	"35.000"	"28.000"	"3.70601032585888"	"14"	"0.001966"	"0.02817"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"638.88654"	"1276.76579"	"1276.76654"	"-0.59"	"-0.00037"	"4/52"	"4"	"52"	"114424.028198242"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"119.2134"	"37609"	"37609"	"37605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"7.7"	""	"9.7"	""	"17.5"	""	"13.7"	"15.0"	""	"726"	"10"	"35.000"	"28.000"	"3.38771311189308"	"18"	"0.007783"	"0.3083"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"638.88660"	"1276.76592"	"1276.76654"	"-0.49"	"-0.00031"	"5/52"	"5"	"52"	"119707.851318359"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"117.6031"	"37330"	"37330"	"37327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"9.2"	""	"7.1"	""	"13.5"	""	"12.8"	"14.2"	""	"726"	"16"	"35.000"	"28.000"	"0.990618935159319"	"19"	"0.001058"	"0.01423"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"638.88666"	"1276.76604"	"1276.76654"	"-0.40"	"-0.00025"	"6/52"	"6"	"52"	"35083053.1430664"	"HCD"	"MS2"	"0"	"570.2"	"22.371"	"41.9191"	"11604"	"11604"	"11586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"519.7"	""	"580.0"	""	"597.3"	""	"1206.0"	""	"1290.3"	"1232.8"	""	"726"	"32"	"35.000"	"28.000"	"0.0255215252117832"	"23"	"0.001058"	"0.01364"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"638.88666"	"1276.76604"	"1276.76654"	"-0.40"	"-0.00025"	"5/52"	"5"	"52"	"5413799.89001465"	"HCD"	"MS2"	"3.253548"	"440.6"	"100.000"	"42.3455"	"11732"	"11732"	"11708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"474.9"	""	"448.2"	""	"483.5"	""	"954.5"	""	"919.9"	"908.3"	""	"726"	"34"	"35.000"	"28.000"	"0.015845524710318"	"26"	"0.0004166"	"0.002483"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"638.88672"	"1276.76616"	"1276.76654"	"-0.30"	"-0.00019"	"3/52"	"3"	"52"	"93416.8299560547"	"HCD"	"MS2"	"31.50486"	"8.4"	"100.000"	"94.3362"	"32540"	"32540"	"32530"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"8.2"	""	"10.2"	""	"17.5"	""	"15.9"	"20.1"	""	"726"	"8"	"35.000"	"28.000"	"5.1868850693953"	"19"	"0.00274"	"0.04293"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"638.88672"	"1276.76616"	"1276.76654"	"-0.30"	"-0.00019"	"3/52"	"3"	"52"	"94435.905090332"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"104.7616"	"35195"	"35195"	"35193"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"5.8"	""	"4.3"	""	"14.1"	""	"14.2"	"15.9"	""	"726"	"8"	"35.000"	"28.000"	"6.09405858578489"	"13"	"0.004631"	"0.1341"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VNATVWK"	"[].vnATVWk.[]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"3"	"638.88672"	"1276.76616"	"1276.76654"	"-0.30"	"-0.00019"	"3/58"	"3"	"58"	"94435.905090332"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"104.7616"	"35195"	"35195"	"35193"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"5.8"	""	"4.3"	""	"14.1"	""	"14.2"	"15.9"	""	"726"	"8"	"35.000"	"28.000"	"6.09405858578489"	"13"	"0.004631"	"0.1341"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"638.88672"	"1276.76616"	"1276.76654"	"-0.30"	"-0.00019"	"3/52"	"3"	"52"	"124975.712219238"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"118.9548"	"37559"	"37559"	"37555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"7.6"	""	"10.4"	""	"15.3"	""	"12.9"	"19.5"	""	"726"	"6"	"35.000"	"28.000"	"8.68773619575155"	"17"	"0.003415"	"0.07656"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"638.88672"	"1276.76616"	"1276.76654"	"-0.30"	"-0.00019"	"6/52"	"6"	"52"	"180660.434814453"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"119.7338"	"37700"	"37700"	"37695"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.5"	""	"7.1"	""	"6.1"	""	"19.2"	""	"13.0"	"17.7"	""	"726"	"5"	"35.000"	"28.000"	"12.6155626603884"	"14"	"0.007814"	"0.31"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"638.88678"	"1276.76628"	"1276.76654"	"-0.20"	"-0.00013"	"4/52"	"4"	"52"	"104186.219604492"	"HCD"	"MS2"	"9.972659"	"7.4"	"100.000"	"117.0701"	"37238"	"37238"	"37234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"11.8"	""	"8.7"	""	"14.1"	""	"11.1"	"16.7"	""	"726"	"17"	"35.000"	"28.000"	"0.763671573635231"	"17"	"0.00175"	"0.0244"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"638.88684"	"1276.76641"	"1276.76654"	"-0.11"	"-0.00007"	"3/52"	"3"	"52"	"93560.0900268555"	"HCD"	"MS2"	"8.504531"	"7.4"	"100.000"	"106.9159"	"35567"	"35567"	"35565"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.1"	""	"8.5"	""	"10.0"	""	"14.3"	""	"12.6"	"15.3"	""	"726"	"10"	"35.000"	"28.000"	"3.25017409894502"	"20"	"0.00348"	"0.07759"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"638.88684"	"1276.76641"	"1276.76654"	"-0.11"	"-0.00007"	"5/52"	"5"	"52"	"98010.2002563477"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"114.5923"	"36820"	"36820"	"36818"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.9"	""	"5.9"	""	"7.3"	""	"10.5"	""	"14.5"	"12.9"	""	"726"	"9"	"35.000"	"28.000"	"4.13910672884704"	"14"	"0.001879"	"0.02685"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"638.88684"	"1276.76641"	"1276.76654"	"-0.11"	"-0.00007"	"6/52"	"6"	"52"	"103626.51373291"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"115.0870"	"36898"	"36898"	"36893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.6"	""	"9.0"	""	"6.1"	""	"14.4"	""	"9.4"	"12.7"	""	"726"	"7"	"35.000"	"28.000"	"7.34355961860213"	"16"	"0.003507"	"0.07841"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.88690"	"1276.76653"	"1276.76654"	"-0.01"	"-0.00001"	"3/52"	"3"	"52"	"118320.141052246"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"116.7855"	"37190"	"37190"	"37188"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"7.3"	""	"7.9"	""	"10.9"	""	"17.7"	"11.3"	""	"726"	"5"	"35.000"	"28.000"	"11.5320528764587"	"13"	"0.005975"	"0.2007"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"638.88708"	"1276.76689"	"1276.76654"	"0.27"	"0.00017"	"3/52"	"3"	"52"	"156629.788208008"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"98.1293"	"33646"	"33646"	"33641"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.8"	""	"10.5"	""	"9.3"	""	"14.5"	""	"14.9"	"14.9"	""	"724"	"6"	"35.000"	"28.000"	"8.9682678486325"	"13"	"0.005603"	"0.1808"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"638.88715"	"1276.76702"	"1276.76654"	"0.37"	"0.00024"	"5/52"	"5"	"52"	"5647468.26361084"	"HCD"	"MS2"	"7.903666"	"457.5"	"100.000"	"42.6480"	"11900"	"11900"	"11875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"493.3"	""	"462.2"	""	"537.0"	""	"886.5"	"0.7"	"1037.9"	"932.7"	""	"719"	"34"	"35.000"	"28.000"	"0.0160582751378271"	"23"	"0.0004166"	"0.002474"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"638.88745"	"1276.76763"	"1276.76654"	"0.85"	"0.00054"	"5/52"	"5"	"52"	"153162.713134766"	"HCD"	"MS2"	"8.523135"	"7.0"	"100.000"	"115.3816"	"36947"	"36947"	"36944"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"7.9"	""	"4.6"	""	"11.7"	""	"18.4"	"16.8"	""	"719"	"10"	"35.000"	"28.000"	"3.71277725371222"	"16"	"0.001846"	"0.02547"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPALSVK"	"[K].fGPALSVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"3"	"3"	"0.4706"	"0.0000"	"1"	"1"	"1"	"426.27182"	"1276.80091"	"1276.80293"	"-1.58"	"-0.00067"	"7/56"	"7"	"56"	"2972252.63421631"	"HCD"	"MS2"	"22.73753"	"159.7"	"100.000"	"45.2804"	"12970"	"12970"	"12939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.0"	""	"196.2"	""	"218.7"	""	"267.2"	""	"319.7"	"317.0"	""	"390"	"17"	"32.000"	"25.000"	"0.385509079821813"	"22"	"0.000523"	"0.002848"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPALSVK"	"[K].fGPALSVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"638.90424"	"1276.80120"	"1276.80293"	"-1.36"	"-0.00087"	"9/56"	"9"	"56"	"16191166.3990479"	"HCD"	"MS2"	"54.89136"	"628.3"	"54.051"	"45.0550"	"12877"	"12877"	"12859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"823.7"	""	"881.7"	""	"927.4"	""	"1022.7"	""	"1207.0"	"1103.3"	""	"390"	"10"	"32.000"	"25.000"	"1.79487666491868"	"18"	"0.0009404"	"0.009978"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPIIFSK"	"[K].nPIIFSk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"638.90430"	"1276.80132"	"1276.80293"	"-1.26"	"-0.00081"	"5/60"	"5"	"60"	"4691124.2666626"	"HCD"	"MS2"	"14.24171"	"365.9"	"100.000"	"43.6120"	"12240"	"12240"	"12221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"486.7"	""	"460.6"	""	"507.4"	""	"667.4"	"3.7"	"643.9"	"697.4"	""	"390"	"17"	"32.000"	"25.000"	"0.368158313073777"	"18"	"0.0006037"	"0.004568"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLYGLPK"	"[K].aGLYGLPk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"426.27203"	"1276.80155"	"1276.80293"	"-1.08"	"-0.00046"	"6/58"	"6"	"58"	"7078142.64923096"	"HCD"	"MS2"	"13.96888"	"313.0"	"100.000"	"42.9345"	"12018"	"12018"	"11987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"448.5"	""	"384.0"	""	"447.8"	""	"468.6"	""	"571.8"	"648.1"	""	"390"	"27"	"32.000"	"25.000"	"0.0377602282969588"	"24"	"0.001557"	"0.02088"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLYGLPK"	"[K].aGLYGLPk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"638.90448"	"1276.80168"	"1276.80293"	"-0.98"	"-0.00062"	"7/58"	"7"	"58"	"38990367.0839844"	"HCD"	"MS2"	"27.34174"	"427.3"	"14.464"	"42.6462"	"11855"	"11855"	"11836"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"580.0"	""	"454.0"	""	"582.2"	""	"611.3"	""	"938.5"	"895.6"	""	"390"	"34"	"32.000"	"25.000"	"0.00706373846912562"	""	"0.001058"	"0.01415"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPALSVK"	"[K].fGPALSVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"638.90454"	"1276.80181"	"1276.80293"	"-0.88"	"-0.00056"	"6/56"	"6"	"56"	"20290925.8795166"	"HCD"	"MS2"	"46.48009"	"661.8"	"45.056"	"44.8691"	"12753"	"12753"	"12736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"861.1"	""	"909.8"	""	"940.0"	""	"1109.4"	""	"1267.2"	"1192.8"	""	"390"	"30"	"32.000"	"25.000"	"0.0179487666491868"	"21"	"0.0005564"	"0.003568"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPALSVK"	"[K].fGPALSVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"638.90460"	"1276.80193"	"1276.80293"	"-0.78"	"-0.00050"	"6/56"	"6"	"56"	"9131267.73571777"	"HCD"	"MS2"	"10.09163"	"430.3"	"60.756"	"45.3635"	"13004"	"13004"	"12987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"552.5"	""	"522.6"	""	"589.2"	""	"706.7"	""	"835.9"	"878.1"	""	"390"	"32"	"32.000"	"25.000"	"0.0133978345802775"	""	"0.0003571"	"0.001519"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLYGLPK"	"[K].aGLYGLPk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"426.27219"	"1276.80201"	"1276.80293"	"-0.72"	"-0.00031"	"7/58"	"7"	"58"	"3367999.60723877"	"HCD"	"MS2"	"10.19822"	"169.8"	"100.000"	"42.7126"	"11883"	"11883"	"11852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.8"	""	"214.2"	""	"242.7"	""	"259.9"	""	"323.2"	"349.0"	""	"390"	"21"	"32.000"	"25.000"	"0.166738009012513"	"21"	"0.008648"	"0.3712"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLYGLPK"	"[K].aGLYGLPk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"638.90479"	"1276.80229"	"1276.80293"	"-0.50"	"-0.00032"	"7/58"	"7"	"58"	"46085261.4157715"	"HCD"	"MS2"	"28.29811"	"660.8"	"19.562"	"42.9003"	"12004"	"12004"	"11987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"933.5"	""	"709.9"	""	"914.3"	""	"906.9"	""	"1463.4"	"1352.2"	""	"390"	"33"	"32.000"	"25.000"	"0.00968355026828155"	"25"	"0.0008125"	"0.007557"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPALSVK"	"[K].fGPALSVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"638.90479"	"1276.80229"	"1276.80293"	"-0.50"	"-0.00032"	"6/56"	"6"	"56"	"4629122.8036499"	"HCD"	"MS2"	"15.88567"	"384.0"	"100.000"	"45.1981"	"12887"	"12887"	"12864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"511.1"	""	"474.2"	""	"500.8"	""	"636.2"	"1.2"	"745.5"	"773.8"	""	"390"	"17"	"32.000"	"25.000"	"0.419792438271252"	"21"	"0.0003571"	"0.001509"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNAILFK"	"[R].lNAILFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"638.92303"	"1276.83879"	"1276.83932"	"-0.41"	"-0.00026"	"6/60"	"6"	"60"	"1878127.8840332"	"HCD"	"MS2"	"0"	"142.6"	"100.000"	"61.1501"	"19423"	"19423"	"19395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.9"	""	"179.1"	""	"207.3"	""	"252.4"	"5.3"	"255.7"	"256.5"	""	"119"	"30"	"27.000"	"20.000"	"0.00532742035502008"	""	"0.0004557"	"0.002544"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNAILFK"	"[R].lNAILFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"638.92407"	"1276.84087"	"1276.83932"	"1.22"	"0.00078"	"6/60"	"6"	"60"	"1518149.6583252"	"HCD"	"MS2"	"17.16629"	"124.9"	"100.000"	"61.0237"	"19318"	"19318"	"19289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.5"	""	"149.7"	""	"165.3"	""	"232.9"	"0.1"	"244.1"	"224.3"	""	"113"	"28"	"27.000"	"20.000"	"0.00957300857252741"	"20"	"0.0004557"	"0.002531"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLLFLTNR"	"[R].gDLLFLTNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P42667"	"Signal peptidase complex catalytic subunit SEC11A OS=Rattus norvegicus OX=10116 GN=Sec11a PE=2 SV=1"	"P42667"	"Signal peptidase complex catalytic subunit SEC11A OS=Rattus norvegicus OX=10116 GN=Sec11a PE=2 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"639.37354"	"1277.73979"	"1277.74150"	"-1.34"	"-0.00085"	"6/76"	"6"	"76"	"2307526.8638916"	"HCD"	"MS2"	"0"	"166.6"	"100.000"	"54.8834"	"16867"	"16867"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.0"	""	"202.9"	""	"218.9"	""	"288.5"	""	"351.1"	"337.6"	""	"774"	"26"	"35.000"	"28.000"	"0.108820562136439"	"22"	"0.0001859"	"0.0003469"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"639.37659"	"1277.74590"	"1277.75056"	"-3.65"	"-0.00233"	"5/52"	"5"	"52"	"4108439.33435059"	"HCD"	"MS2"	"27.92798"	"352.8"	"100.000"	"43.9444"	"12425"	"12425"	"12400"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"370.1"	""	"386.1"	""	"404.9"	""	"709.3"	""	"719.7"	"766.4"	""	"698"	"18"	"35.000"	"28.000"	"0.518591539158165"	"17"	"0.0008731"	"0.008524"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"639.37671"	"1277.74614"	"1277.75056"	"-3.46"	"-0.00221"	"5/52"	"5"	"52"	"3793521.72753906"	"HCD"	"MS2"	"30.20717"	"317.5"	"100.000"	"43.7220"	"12285"	"12285"	"12266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"368.6"	""	"324.4"	""	"362.5"	""	"652.7"	""	"674.6"	"634.0"	""	"706"	"19"	"35.000"	"28.000"	"0.497478945842922"	"17"	"0.0007793"	"0.007415"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVDLPK"	"[K].fTVDLPk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"426.60016"	"1277.78592"	"1277.78695"	"-0.80"	"-0.00034"	"5/52"	"5"	"52"	"1046357.42285156"	"HCD"	"MS2"	"34.71531"	"66.5"	"100.000"	"51.2420"	"15396"	"15396"	"15366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.2"	""	"80.9"	""	"85.4"	""	"119.0"	"0.5"	"120.8"	"133.9"	""	"472"	"19"	"33.000"	"26.000"	"0.293705448378047"	"17"	"0.0006037"	"0.006158"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVDLPK"	"[K].fTVDLPk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"639.39673"	"1277.78618"	"1277.78695"	"-0.60"	"-0.00038"	"6/52"	"6"	"52"	"3023453.03216553"	"HCD"	"MS2"	"20.29018"	"250.7"	"100.000"	"51.0371"	"15312"	"15312"	"15286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"319.3"	""	"315.2"	""	"363.8"	""	"423.5"	"3.7"	"482.8"	"468.0"	""	"472"	"32"	"33.000"	"26.000"	"0.0157004464863611"	"26"	"0.0004166"	"0.002389"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVDLPK"	"[K].fTVDLPk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"639.39734"	"1277.78740"	"1277.78695"	"0.36"	"0.00023"	"6/52"	"6"	"52"	"2848787.01837158"	"HCD"	"MS2"	"5.608564"	"219.8"	"100.000"	"50.8626"	"15190"	"15190"	"15170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"296.5"	""	"286.7"	""	"296.7"	""	"362.6"	""	"418.4"	"425.8"	""	"472"	"33"	"33.000"	"26.000"	"0.0115056723664399"	""	"0.0004166"	"0.002262"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMVELSK"	"[K].lMVELSk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"639.39905"	"1277.79082"	"1277.79032"	"0.39"	"0.00025"	"12/52"	"12"	"52"	"6033149.85461426"	"HCD"	"MS2"	"22.41893"	"512.8"	"100.000"	"49.8430"	"14826"	"14826"	"14798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"774.0"	""	"740.2"	""	"715.3"	""	"639.0"	""	"1004.4"	"994.6"	""	"428"	"34"	"33.000"	"26.000"	"0.00798755337682843"	""	"0.0006396"	"0.006347"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMVELSK"	"[K].lMVELSk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"639.39966"	"1277.79204"	"1277.79032"	"1.35"	"0.00086"	"12/52"	"12"	"52"	"7466449.71429443"	"HCD"	"MS2"	"24.23618"	"614.0"	"100.000"	"49.5607"	"14664"	"14664"	"14639"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"922.7"	""	"846.3"	""	"873.9"	""	"768.5"	""	"1231.1"	"1185.8"	""	"430"	"35"	"33.000"	"26.000"	"0.00703782493989502"	""	"0.0008453"	"0.007943"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFELLK"	"[K].aVFELLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTQ2"	"Podocalyxin OS=Rattus norvegicus OX=10116 GN=Podxl PE=1 SV=2"	"Q9WTQ2"	"Podocalyxin OS=Rattus norvegicus OX=10116 GN=Podxl PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"639.41486"	"1277.82244"	"1277.82333"	"-0.70"	"-0.00045"	"12/48"	"12"	"48"	"24348572.7093506"	"HCD"	"MS2"	"12.83379"	"590.4"	"37.971"	"62.5338"	"19988"	"19988"	"19971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"487.8"	""	"618.2"	""	"556.7"	""	"1108.4"	""	"1379.3"	"1477.2"	""	"181"	"36"	"29.000"	"22.000"	"0.00218096441296137"	""	"0.002829"	"0.04836"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEGIIK"	"[R].lFEGIIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62915"	"Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1"	"Q62915"	"Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1"	"0"	"2"	"2"	"0.2903"	"0.0000"	"1"	"1"	"1"	"639.41492"	"1277.82256"	"1277.82333"	"-0.61"	"-0.00039"	"6/48"	"6"	"48"	"2552869.44549561"	"HCD"	"MS2"	"21.01576"	"179.8"	"100.000"	"62.8704"	"20125"	"20125"	"20099"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.6"	""	"212.7"	""	"211.5"	""	"316.2"	""	"377.3"	"402.9"	""	"181"	"31"	"29.000"	"22.000"	"0.0075622073149928"	""	"0.0006037"	"0.004627"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIILFK"	"[K].eGIILFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"639.41492"	"1277.82256"	"1277.82333"	"-0.61"	"-0.00039"	"12/48"	"12"	"48"	"3888704.19458008"	"HCD"	"MS2"	"24.83925"	"304.7"	"100.000"	"56.5785"	"17560"	"17560"	"17541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"402.4"	""	"401.5"	""	"371.5"	""	"536.1"	"6.1"	"565.9"	"605.7"	""	"181"	"34"	"29.000"	"22.000"	"0.0036445891606454"	""	"0.0006037"	"0.00501"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIFAIK"	"[K].dIIFAIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"639.41492"	"1277.82256"	"1277.82333"	"-0.61"	"-0.00039"	"12/48"	"12"	"48"	"8755367.87023926"	"HCD"	"MS2"	"42.55693"	"618.1"	"100.000"	"60.5812"	"19137"	"19137"	"19113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"934.5"	""	"853.4"	""	"874.7"	""	"974.8"	""	"1046.6"	"1167.5"	""	"181"	"39"	"29.000"	"22.000"	"0.00124064799837919"	""	"0.0008125"	"0.007745"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIILFK"	"[K].eGIILFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"639.41504"	"1277.82280"	"1277.82333"	"-0.41"	"-0.00026"	"6/48"	"6"	"48"	"4911299.33770752"	"HCD"	"MS2"	"20.03821"	"359.7"	"100.000"	"56.3017"	"17393"	"17393"	"17371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"509.4"	""	"446.5"	""	"457.9"	""	"627.1"	"0.9"	"658.0"	"710.0"	""	"181"	"34"	"29.000"	"22.000"	"0.00332390481950767"	""	"0.0006037"	"0.005486"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIFAIK"	"[K].dIIFAIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"639.41516"	"1277.82305"	"1277.82333"	"-0.22"	"-0.00014"	"12/48"	"12"	"48"	"9178324.99047852"	"HCD"	"MS2"	"24.59508"	"615.7"	"100.000"	"60.7377"	"19254"	"19254"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"891.4"	""	"825.6"	""	"907.4"	""	"987.0"	""	"1086.1"	"1141.2"	""	"181"	"37"	"29.000"	"22.000"	"0.00179328195835361"	""	"0.0008731"	"0.00843"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPVSK"	"[RK].lLYPVSk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63788; Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit beta OS=Rattus norvegicus OX=10116 GN=Pik3r2 PE=2 SV=1; Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"639.41534"	"1277.82341"	"1277.82333"	"0.06"	"0.00004"	"6/48"	"6"	"48"	"2582984.69403076"	"HCD"	"MS2"	"0"	"210.5"	"100.000"	"46.2981"	"13333"	"13333"	"13304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"296.2"	""	"284.5"	""	"284.3"	""	"352.6"	""	"391.6"	"386.3"	""	"181"	"20"	"29.000"	"22.000"	"0.0854375093038761"	"19"	"0.0006037"	"0.005325"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFELLK"	"[K].aVFELLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTQ2"	"Podocalyxin OS=Rattus norvegicus OX=10116 GN=Podxl PE=1 SV=2"	"Q9WTQ2"	"Podocalyxin OS=Rattus norvegicus OX=10116 GN=Podxl PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"639.41547"	"1277.82366"	"1277.82333"	"0.25"	"0.00016"	"12/48"	"12"	"48"	"18477024.5565186"	"HCD"	"MS2"	"15.76554"	"912.4"	"77.263"	"62.4040"	"19882"	"19882"	"19865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"764.2"	""	"922.3"	""	"853.8"	""	"1704.6"	"10.4"	"2197.7"	"2245.1"	""	"181"	"36"	"29.000"	"22.000"	"0.0022164022338695"	"21"	"0.00109"	"0.0151"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEGIIK"	"[R].lFEGIIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62915"	"Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1"	"Q62915"	"Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1"	"0"	"2"	"2"	"0.2069"	"0.0000"	"1"	"1"	"1"	"639.41553"	"1277.82378"	"1277.82333"	"0.35"	"0.00022"	"6/48"	"6"	"48"	"2856953.0234375"	"HCD"	"MS2"	"16.5844"	"205.0"	"100.000"	"62.7242"	"20012"	"20012"	"19993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.5"	""	"229.0"	""	"237.4"	""	"345.1"	""	"446.0"	"473.8"	""	"178"	"29"	"29.000"	"22.000"	"0.011386493607002"	""	"0.000494"	"0.002726"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPVSK"	"[RK].lLYPVSk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63788; Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit beta OS=Rattus norvegicus OX=10116 GN=Pik3r2 PE=2 SV=1; Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"639.41602"	"1277.82475"	"1277.82333"	"1.11"	"0.00071"	"6/48"	"6"	"48"	"2756770.2935791"	"HCD"	"MS2"	"20.11046"	"215.9"	"100.000"	"46.6310"	"13517"	"13517"	"13490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.4"	""	"291.2"	""	"297.8"	""	"366.3"	""	"381.3"	"399.4"	""	"178"	"22"	"29.000"	"22.000"	"0.0621426839628683"	"21"	"0.0006037"	"0.00556"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEGIIK"	"[R].lFEGIIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62915"	"Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1"	"Q62915"	"Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"639.41626"	"1277.82524"	"1277.82333"	"1.50"	"0.00096"	"12/48"	"12"	"48"	"2333857.20629883"	"HCD"	"MS2"	"17.00178"	"195.8"	"100.000"	"60.1823"	"18974"	"18974"	"18953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.0"	""	"265.3"	""	"264.1"	""	"323.9"	""	"354.1"	"378.0"	""	"181"	"23"	"29.000"	"22.000"	"0.0455668050953054"	""	"0.0006037"	"0.005831"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEGIIK"	"[R].lFEGIIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62915"	"Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1"	"Q62915"	"Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"639.41687"	"1277.82646"	"1277.82333"	"2.45"	"0.00157"	"12/48"	"12"	"48"	"2742612.59130859"	"HCD"	"MS2"	"21.57349"	"227.1"	"100.000"	"60.3179"	"19083"	"19083"	"19059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.2"	""	"304.3"	""	"326.6"	""	"397.4"	""	"396.7"	"433.3"	""	"174"	"23"	"29.000"	"22.000"	"0.0413541646570241"	""	"0.0008453"	"0.008071"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVTVIK"	"[R].fLVTVIk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"639.43353"	"1277.85979"	"1277.85972"	"0.06"	"0.00004"	"12/48"	"12"	"48"	"2927627.91699219"	"HCD"	"MS2"	"44.29458"	"217.8"	"100.000"	"60.5184"	"19165"	"19165"	"19139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.8"	""	"317.6"	""	"356.6"	""	"331.3"	""	"355.6"	"367.9"	""	"55"	"35"	"24.000"	"17.000"	"0.000822872775067252"	""	"0.0006037"	"0.00378"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVTVIK"	"[R].fLVTVIk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"639.43433"	"1277.86138"	"1277.85972"	"1.30"	"0.00083"	"12/48"	"12"	"48"	"3261737.38226318"	"HCD"	"MS2"	"33.1643"	"246.7"	"100.000"	"60.3897"	"19059"	"19059"	"19033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"354.2"	""	"345.9"	""	"395.5"	""	"389.0"	""	"398.3"	"452.1"	""	"37"	"35"	"22.000"	"15.000"	"0.000528654250524365"	""	"0.0006737"	"0.006726"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEALTSAK"	"[K].tEALTSAk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"639.88684"	"1278.76641"	"1278.76694"	"-0.42"	"-0.00027"	"12/66"	"12"	"66"	"572301.299560547"	"HCD"	"MS2"	"0"	"60.8"	"100.000"	"31.2888"	"7259"	"7259"	"7232"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.4"	""	"70.4"	""	"72.8"	""	"108.3"	""	"128.6"	"127.8"	""	"588"	"38"	"34.000"	"27.000"	"0.00464886923545493"	"19"	"0.0001308"	"0.0002812"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFALDQK"	"[R].vFALDQk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"639.89398"	"1278.78069"	"1278.78219"	"-1.18"	"-0.00075"	"6/50"	"6"	"50"	"13854303.6878662"	"HCD"	"MS2"	"3.636398"	"555.9"	"50.166"	"43.4220"	"12163"	"12163"	"12143"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1033.7"	""	"771.3"	""	"581.4"	""	"990.7"	"0.7"	"973.4"	"907.7"	""	"431"	"34"	"33.000"	"26.000"	"0.00766385491516162"	"24"	"0.0007793"	"0.007296"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFALDQK"	"[R].vFALDQk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"639.89398"	"1278.78069"	"1278.78219"	"-1.18"	"-0.00075"	"6/50"	"6"	"50"	"14329641.199585"	"HCD"	"MS2"	"0"	"604.5"	"53.042"	"43.6539"	"12306"	"12306"	"12287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1110.6"	""	"847.5"	""	"616.1"	""	"1082.4"	""	"1048.0"	"1015.7"	""	"431"	"35"	"33.000"	"26.000"	"0.00764622853798354"	"24"	"0.0008125"	"0.007689"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVATLMK"	"[K].aSVATLMk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"639.89648"	"1278.78569"	"1278.78556"	"0.10"	"0.00006"	"7/62"	"7"	"62"	"8330298.53466797"	"HCD"	"MS2"	"24.01012"	"651.1"	"100.000"	"40.7058"	"11107"	"11107"	"11085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"836.4"	""	"1009.5"	""	"984.8"	""	"769.6"	""	"1187.4"	"1386.8"	""	"419"	"44"	"33.000"	"26.000"	"0.000816928462087358"	"19"	"0.0001889"	"0.0006624"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFYPNLIR"	"[K].qFYPNLIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"640.37085"	"1279.73442"	"1279.73602"	"-1.25"	"-0.00080"	"6/72"	"6"	"72"	"1971932.0536499"	"HCD"	"MS2"	"14.5046"	"157.7"	"100.000"	"46.1744"	"13282"	"13282"	"13260"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"214.9"	""	"206.8"	""	"242.5"	""	"254.4"	"3.2"	"288.0"	"284.3"	""	"767"	"19"	"35.000"	"28.000"	"0.46426438421661"	"19"	"0.002711"	"0.04138"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFYPNLIR"	"[K].qFYPNLIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"640.37109"	"1279.73491"	"1279.73602"	"-0.87"	"-0.00056"	"6/72"	"6"	"72"	"9915107.20611572"	"HCD"	"MS2"	"23.83403"	"544.1"	"100.000"	"45.8671"	"13156"	"13156"	"13133"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"786.9"	""	"761.6"	""	"800.3"	""	"871.0"	"20.0"	"945.0"	"966.2"	""	"767"	"24"	"35.000"	"28.000"	"0.168564209520406"	"25"	"0.0005564"	"0.003486"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFYPNLIR"	"[K].qFYPNLIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"640.37128"	"1279.73528"	"1279.73602"	"-0.58"	"-0.00037"	"6/72"	"6"	"72"	"10781235.8772583"	"HCD"	"MS2"	"18.04157"	"508.6"	"84.079"	"46.1450"	"13318"	"13318"	"13296"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"775.1"	""	"704.9"	""	"741.6"	""	"816.7"	"18.2"	"851.2"	"904.9"	""	"721"	"32"	"35.000"	"28.000"	"0.022746012268511"	"24"	"0.0006037"	"0.003753"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEELGVK"	"[R].fEELGVk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"640.38470"	"1279.76213"	"1279.76621"	"-3.19"	"-0.00204"	"6/50"	"6"	"50"	"5318501.21551514"	"HCD"	"MS2"	"0"	"453.2"	"100.000"	"44.7499"	"12753"	"12753"	"12734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"571.3"	""	"593.3"	""	"643.8"	""	"800.7"	""	"823.5"	"864.1"	""	"502"	"25"	"33.000"	"27.000"	"0.0727233240513032"	""	"0.0006037"	"0.005487"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEELGVK"	"[R].fEELGVk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"640.38495"	"1279.76262"	"1279.76621"	"-2.80"	"-0.00179"	"6/50"	"6"	"50"	"4984959.95074463"	"HCD"	"MS2"	"0"	"435.6"	"100.000"	"44.4836"	"12595"	"12595"	"12578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"517.0"	""	"563.4"	""	"611.7"	""	"801.1"	""	"793.4"	"844.6"	""	"487"	"25"	"33.000"	"26.000"	"0.0710393477909285"	""	"0.0006037"	"0.005273"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGAGAFGK"	"[K].tLGAGAFGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q00495"	"Macrophage colony-stimulating factor 1 receptor OS=Rattus norvegicus OX=10116 GN=Csf1r PE=1 SV=1"	"Q00495"	"Macrophage colony-stimulating factor 1 receptor OS=Rattus norvegicus OX=10116 GN=Csf1r PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"640.39142"	"1279.77556"	"1279.77744"	"-1.47"	"-0.00094"	"8/64"	"8"	"64"	"3244782.32470703"	"HCD"	"MS2"	"0"	"318.4"	"100.000"	"39.6640"	"10640"	"10640"	"10614"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"317.8"	""	"363.1"	""	"436.6"	""	"574.9"	""	"637.5"	"695.4"	""	"419"	"43"	"33.000"	"26.000"	"0.00107940401039878"	"26"	"7.476E-05"	"0.0001977"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGAGAFGK"	"[K].tLGAGAFGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q00495"	"Macrophage colony-stimulating factor 1 receptor OS=Rattus norvegicus OX=10116 GN=Csf1r PE=1 SV=1"	"Q00495"	"Macrophage colony-stimulating factor 1 receptor OS=Rattus norvegicus OX=10116 GN=Csf1r PE=1 SV=1"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"640.39154"	"1279.77580"	"1279.77744"	"-1.28"	"-0.00082"	"7/64"	"7"	"64"	"3470599.95922852"	"HCD"	"MS2"	"0"	"323.2"	"100.000"	"39.7752"	"10728"	"10728"	"10702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"329.7"	""	"396.1"	""	"442.7"	""	"574.5"	"6.2"	"662.3"	"658.2"	""	"419"	"43"	"33.000"	"26.000"	"0.00108939161273772"	""	"0"	"0.0001799"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGAGSVFR"	"[R].kGAGSVFR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"427.26685"	"1279.78598"	"1279.78868"	"-2.10"	"-0.00090"	"12/70"	"12"	"70"	"4096976.63110352"	"HCD"	"MS2"	"7.169902"	"344.8"	"100.000"	"27.4245"	"5680"	"5680"	"5660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"615.3"	""	"599.0"	""	"630.1"	""	"542.4"	""	"481.2"	"383.3"	""	"340"	"8"	"32.000"	"25.000"	"2.76343288477583"	"13"	"0.000523"	"0.003209"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGAGSVFR"	"[R].kGAGSVFR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"427.26733"	"1279.78745"	"1279.78868"	"-0.96"	"-0.00041"	"7/70"	"7"	"70"	"5046890.69390869"	"HCD"	"MS2"	"10.84871"	"407.7"	"100.000"	"27.4784"	"5737"	"5737"	"5714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"736.9"	""	"703.5"	""	"726.4"	""	"664.4"	"0.4"	"552.9"	"455.8"	""	"343"	"10"	"32.000"	"25.000"	"1.76711219655737"	"13"	"0.0008731"	"0.00935"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGAGSVFR"	"[R].kGAGSVFR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.39764"	"1279.78801"	"1279.78868"	"-0.52"	"-0.00033"	"5/70"	"5"	"70"	"1195134.09161377"	"HCD"	"MS2"	"6.239872"	"75.1"	"100.000"	"27.4830"	"5739"	"5739"	"5714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.2"	""	"139.4"	""	"134.4"	""	"113.1"	""	"102.1"	"84.7"	""	"318"	"16"	"32.000"	"25.000"	"0.414378414449825"	"13"	"0.004167"	"0.1069"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVYIDK"	"[R].lAVYIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"640.40387"	"1279.80046"	"1279.80260"	"-1.67"	"-0.00107"	"6/48"	"6"	"48"	"4040426.46990967"	"HCD"	"MS2"	"16.32706"	"282.2"	"100.000"	"47.9563"	"14011"	"14011"	"13992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.9"	""	"242.4"	""	"223.1"	""	"554.1"	"0.2"	"717.7"	"734.2"	""	"255"	"32"	"31.000"	"24.000"	"0.00750775660578376"	"24"	"0.0008125"	"0.007847"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVYIDK"	"[R].lAVYIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"640.40405"	"1279.80083"	"1279.80260"	"-1.38"	"-0.00088"	"6/48"	"6"	"48"	"4688796.13641357"	"HCD"	"MS2"	"30.59455"	"352.4"	"100.000"	"48.2083"	"14162"	"14162"	"14146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.7"	""	"287.5"	""	"251.0"	""	"697.4"	""	"885.6"	"967.8"	""	"255"	"31"	"31.000"	"24.000"	"0.0099199660257575"	"24"	"0.0008125"	"0.007634"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDLLVK"	"[R].sFDLLVk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"640.40454"	"1279.80181"	"1279.80260"	"-0.62"	"-0.00039"	"7/52"	"7"	"52"	"5934861.73577881"	"HCD"	"MS2"	"26.27826"	"412.2"	"100.000"	"55.9512"	"17250"	"17250"	"17227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"606.7"	""	"532.0"	""	"538.0"	""	"759.8"	"0.0"	"715.3"	"751.7"	""	"244"	"23"	"30.000"	"23.000"	"0.0614270742721244"	"22"	"0.0006037"	"0.005119"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDLLVK"	"[R].sFDLLVk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"640.40515"	"1279.80303"	"1279.80260"	"0.34"	"0.00022"	"10/52"	"10"	"52"	"6366178.95507813"	"HCD"	"MS2"	"23.65899"	"451.3"	"100.000"	"56.1641"	"17391"	"17391"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"668.9"	""	"558.6"	""	"591.9"	""	"818.1"	""	"815.0"	"823.7"	""	"235"	"21"	"30.000"	"23.000"	"0.0957277533724487"	"21"	"0.001007"	"0.01083"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WISIMTER"	"[K].wISImTER.[S]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"640.84583"	"1280.68437"	"1280.68702"	"-2.07"	"-0.00133"	"6/64"	"6"	"64"	"4406311.42218018"	"HCD"	"MS2"	"0"	"261.2"	"100.000"	"43.4293"	"12215"	"12215"	"12202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"332.7"	""	"352.6"	""	"345.1"	""	"447.1"	"2.5"	"482.3"	"513.9"	""	"741"	"22"	"35.000"	"28.000"	"0.248764390009065"	"23"	"0.001252"	"0.01872"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WISIMTER"	"[K].wISImTER.[S]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"640.84637"	"1280.68547"	"1280.68702"	"-1.21"	"-0.00078"	"7/64"	"7"	"64"	"3985955.49682617"	"HCD"	"MS2"	"0"	"284.8"	"100.000"	"43.2590"	"12097"	"12097"	"12076"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"392.3"	""	"411.5"	""	"353.3"	""	"468.9"	""	"532.0"	"544.6"	""	"730"	"9"	"35.000"	"28.000"	"4.21010439104698"	"18"	"0.005323"	"0.1633"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDELQLFR"	"[K].mDELQLFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"640.84662"	"1280.68596"	"1280.68702"	"-0.83"	"-0.00053"	"6/64"	"6"	"64"	"3253277.75115967"	"HCD"	"MS2"	"0"	"184.7"	"100.000"	"58.3348"	"18224"	"18224"	"18203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.2"	""	"262.4"	""	"259.6"	""	"268.8"	""	"351.8"	"358.6"	""	"728"	"31"	"35.000"	"28.000"	"0.0278036225222279"	"22"	"0.0002277"	"0.001186"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDELQLFR"	"[K].mDELQLFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"640.84705"	"1280.68682"	"1280.68702"	"-0.16"	"-0.00010"	"6/64"	"6"	"64"	"2821455.79968262"	"HCD"	"MS2"	"0"	"157.9"	"100.000"	"58.5405"	"18362"	"18362"	"18341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.3"	""	"211.3"	""	"216.8"	""	"235.7"	"2.5"	"300.7"	"306.5"	""	"713"	"33"	"35.000"	"28.000"	"0.0200013603455576"	"25"	"0.0002277"	"0.001245"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGELCAGK"	"[K].vGELcAGk.[E]"	"N-Term(TMT6plex); C5(Methylthio); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"640.85797"	"1280.70867"	"1280.71069"	"-1.58"	"-0.00101"	"7/56"	"7"	"56"	"8136691.84179688"	"HCD"	"MS2"	"20.61244"	"704.4"	"100.000"	"45.4020"	"12970"	"12970"	"12955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1160.5"	""	"1145.5"	""	"1133.8"	""	"884.8"	""	"1126.8"	"1214.0"	""	"702"	"42"	"35.000"	"28.000"	"0.00247347267207468"	"17"	"0.0001889"	"0.0007846"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGELCAGK"	"[K].vGELcAGk.[E]"	"N-Term(TMT6plex); C5(Methylthio); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"640.85840"	"1280.70952"	"1280.71069"	"-0.91"	"-0.00058"	"7/56"	"7"	"56"	"9753183.09625244"	"HCD"	"MS2"	"16.93851"	"638.8"	"73.593"	"45.6640"	"13126"	"13126"	"13111"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1075.2"	""	"1064.1"	""	"1015.4"	""	"793.0"	"5.3"	"1007.0"	"1076.5"	""	"713"	"35"	"35.000"	"28.000"	"0.0109410633886145"	"16"	"0.0001889"	"0.0009286"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGLSNFSSR"	"[K].aLGLSNFSSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"640.86108"	"1280.71489"	"1280.71602"	"-0.88"	"-0.00056"	"9/88"	"9"	"88"	"12090486.5616455"	"HCD"	"MS2"	"9.987834"	"577.5"	"98.981"	"40.2333"	"10870"	"10870"	"10853"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"883.1"	""	"820.0"	""	"902.1"	""	"865.0"	"10.9"	"979.1"	"1003.6"	""	"705"	"49"	"35.000"	"28.000"	"0.00045410796697183"	"20"	"0.0001308"	"0.0002423"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGLSNFSSR"	"[K].aLGLSNFSSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"640.86182"	"1280.71636"	"1280.71602"	"0.27"	"0.00017"	"9/88"	"9"	"88"	"12241960.3220215"	"HCD"	"MS2"	"8.061227"	"571.7"	"100.000"	"40.3954"	"10980"	"10980"	"10957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"871.3"	""	"821.9"	""	"882.8"	""	"858.9"	"3.6"	"969.2"	"1000.8"	""	"718"	"50"	"35.000"	"28.000"	"0.000337360668492705"	"20"	"0"	"0.000134"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVLEVMGR"	"[R].tFVLEVMGR.[H]"	"N-Term(TMT6plex)"	"3"	"3"	"P30835; P47858; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47858; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"640.86548"	"1280.72368"	"1280.72341"	"0.21"	"0.00014"	"7/72"	"7"	"72"	"6792899.38458252"	"HCD"	"MS2"	"6.628438"	"321.2"	"100.000"	"57.6238"	"17933"	"17933"	"17915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"415.4"	""	"537.0"	""	"562.5"	""	"330.3"	""	"560.1"	"637.4"	""	"646"	"33"	"35.000"	"28.000"	"0.0147299923852269"	"22"	"0.0001859"	"0.0003608"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVLEVMGR"	"[R].tFVLEVMGR.[H]"	"N-Term(TMT6plex)"	"3"	"3"	"P30835; P47858; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47858; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"640.86560"	"1280.72392"	"1280.72341"	"0.40"	"0.00026"	"6/72"	"6"	"72"	"6367904.00292969"	"HCD"	"MS2"	"2.675602"	"305.8"	"100.000"	"57.7976"	"18058"	"18058"	"18037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"419.7"	""	"526.3"	""	"504.6"	""	"315.6"	""	"515.0"	"617.6"	""	"631"	"34"	"34.000"	"28.000"	"0.0128528477647198"	"23"	"0.0001889"	"0.0005344"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWMVGTK"	"[K].tWMVGTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"640.87524"	"1280.74321"	"1280.74370"	"-0.38"	"-0.00024"	"10/58"	"10"	"58"	"43795089.2513428"	"HCD"	"MS2"	"19.23132"	"1520.7"	"47.426"	"41.0591"	"11208"	"11208"	"11189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2282.4"	""	"2324.0"	""	"2144.9"	""	"2102.5"	"14.7"	"2920.9"	"2614.8"	""	"567"	"28"	"34.000"	"27.000"	"0.0472664584758226"	"20"	"0.001945"	"0.02757"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWMVGTK"	"[K].tWMVGTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"640.87543"	"1280.74358"	"1280.74370"	"-0.10"	"-0.00006"	"6/58"	"6"	"58"	"30890805.9779053"	"HCD"	"MS2"	"29.14208"	"1464.0"	"69.425"	"41.2086"	"11313"	"11313"	"11293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2199.7"	""	"2298.9"	""	"2087.5"	""	"2011.3"	"1.1"	"2792.3"	"2473.9"	""	"567"	"35"	"34.000"	"27.000"	"0.00902719997409357"	"20"	"0.0009727"	"0.01064"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALACLK"	"[K].aSALAcLk.[V]"	"N-Term(TMT6plex); C6(Methylthio); K8(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"640.87622"	"1280.74516"	"1280.74707"	"-1.49"	"-0.00095"	"7/56"	"7"	"56"	"1797977.23266602"	"HCD"	"MS2"	"0"	"148.4"	"100.000"	"50.3847"	"14995"	"14995"	"14970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.2"	"3.7"	"208.0"	""	"213.8"	""	"209.9"	"2.5"	"270.4"	"262.1"	""	"556"	"21"	"34.000"	"27.000"	"0.236072172060095"	"19"	"0.0001889"	"0.0009724"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSAQLEK"	"[K].fSAQLEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"640.88379"	"1280.76030"	"1280.76146"	"-0.90"	"-0.00058"	"6/62"	"6"	"62"	"6085328.22558594"	"HCD"	"MS2"	"25.69603"	"509.2"	"100.000"	"38.6468"	"10222"	"10222"	"10198"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"803.6"	""	"703.1"	""	"751.8"	""	"708.4"	""	"910.8"	"948.1"	""	"412"	"31"	"33.000"	"26.000"	"0.0172928757222996"	""	"0.0008453"	"0.00806"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSAQLEK"	"[K].fSAQLEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"640.88428"	"1280.76128"	"1280.76146"	"-0.14"	"-0.00009"	"6/62"	"6"	"62"	"5538991.85803223"	"HCD"	"MS2"	"20.34166"	"454.7"	"100.000"	"38.7601"	"10312"	"10312"	"10286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"714.6"	""	"592.0"	""	"672.2"	""	"654.5"	""	"809.0"	"865.4"	""	"408"	"31"	"33.000"	"26.000"	"0.0169289556572942"	""	"0.0006037"	"0.005749"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAFGGWK"	"[K].gTAFGGWk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"641.37048"	"1281.73369"	"1281.73558"	"-1.47"	"-0.00094"	"7/56"	"7"	"56"	"12294714.1149902"	"HCD"	"MS2"	"50.95141"	"1102.8"	"99.306"	"41.7788"	"11547"	"11547"	"11522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1689.0"	""	"1562.4"	""	"1578.4"	""	"1705.3"	"4.0"	"1951.9"	"1948.5"	""	"563"	"31"	"34.000"	"27.000"	"0.024916004416738"	"22"	"0.0003146"	"0.001469"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAFGGWK"	"[K].gTAFGGWk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"641.37109"	"1281.73491"	"1281.73558"	"-0.52"	"-0.00033"	"6/56"	"6"	"56"	"11827902.0854492"	"HCD"	"MS2"	"38.43514"	"1111.3"	"100.000"	"41.5750"	"11420"	"11420"	"11403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1659.7"	""	"1513.2"	""	"1600.9"	""	"1759.9"	""	"1970.7"	"2027.6"	""	"563"	"31"	"34.000"	"27.000"	"0.0207720040781342"	"23"	"0.0003839"	"0.001949"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVFVHLPR"	"[K].aNVFVHLPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"427.92542"	"1281.76169"	"1281.76291"	"-0.95"	"-0.00040"	"8/80"	"8"	"80"	"6400361.64935303"	"HCD"	"MS2"	"27.63295"	"111.3"	"100.000"	"37.7176"	"9884"	"9884"	"9857"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.9"	""	"177.4"	""	"177.4"	""	"159.7"	"1.9"	"180.1"	"186.2"	""	"436"	"55"	"33.000"	"26.000"	"7.03811718533355E-05"	"16"	"0.0001308"	"0.000248"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMELFVK"	"[K].gMELFVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"641.38562"	"1281.76396"	"1281.76410"	"-0.11"	"-0.00007"	"6/48"	"6"	"48"	"6583575.82073975"	"HCD"	"MS2"	"6.283031"	"478.3"	"100.000"	"51.1756"	"15318"	"15318"	"15298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"730.4"	""	"680.1"	""	"720.7"	""	"595.4"	""	"866.3"	"944.2"	""	"400"	"19"	"33.000"	"26.000"	"0.253530373171569"	"17"	"0.0009404"	"0.009726"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMELFVK"	"[K].gMELFVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"641.38593"	"1281.76457"	"1281.76410"	"0.37"	"0.00024"	"12/48"	"12"	"48"	"6457057.38330078"	"HCD"	"MS2"	"14.37969"	"493.3"	"100.000"	"51.3408"	"15436"	"15436"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"767.4"	""	"689.8"	""	"757.1"	""	"606.7"	""	"889.0"	"966.9"	""	"396"	"21"	"32.000"	"25.000"	"0.172450790811304"	"17"	"0.0008731"	"0.008489"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLTTIVK"	"[K].cLTTIVk.[C]"	"N-Term(TMT6plex); C1(Methylthio); K7(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"641.38684"	"1281.76641"	"1281.76747"	"-0.83"	"-0.00053"	"12/50"	"12"	"50"	"6832101.80767822"	"HCD"	"MS2"	"0"	"553.7"	"100.000"	"49.7949"	"14806"	"14806"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"579.2"	""	"588.3"	""	"618.9"	""	"1275.2"	""	"1187.3"	"1010.5"	""	"392"	"34"	"32.000"	"25.000"	"0.0073833944600846"	""	"0.0005564"	"0.00359"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVEALYK"	"[R].tVEALYk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"641.39398"	"1281.78069"	"1281.78186"	"-0.91"	"-0.00059"	"12/52"	"12"	"52"	"3685349.15350342"	"HCD"	"MS2"	"0"	"356.0"	"100.000"	"38.3090"	"10127"	"10127"	"10097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"438.1"	""	"494.0"	""	"516.8"	""	"552.0"	""	"694.3"	"687.0"	""	"294"	"33"	"31.000"	"24.000"	"0.00662700555675946"	"21"	"0.0006037"	"0.004161"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EISYAIK"	"[R].eISYAIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"3"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"641.39459"	"1281.78191"	"1281.78186"	"0.04"	"0.00002"	"6/52"	"6"	"52"	"4180629.69396973"	"HCD"	"MS2"	"18.29927"	"419.0"	"100.000"	"39.7001"	"10698"	"10698"	"10670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"546.6"	""	"541.0"	""	"619.8"	""	"667.6"	""	"800.0"	"800.7"	""	"299"	"18"	"31.000"	"24.000"	"0.244141266210203"	"17"	"0.0009727"	"0.01074"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHLLLAK"	"[R].eHLLLAk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"427.94757"	"1281.82816"	"1281.82948"	"-1.03"	"-0.00044"	"9/48"	"9"	"48"	"11338109.5819092"	"HCD"	"MS2"	"10.76583"	"521.1"	"91.303"	"34.9602"	"8752"	"8752"	"8730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"783.5"	""	"712.3"	""	"811.5"	""	"860.0"	""	"945.5"	"820.3"	""	"118"	"26"	"27.000"	"20.000"	"0.0142840713757435"	"19"	"0.0006037"	"0.004175"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHLLLAK"	"[R].eHLLLAk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"427.94775"	"1281.82871"	"1281.82948"	"-0.60"	"-0.00026"	"9/48"	"9"	"48"	"10260100.1192627"	"HCD"	"MS2"	"9.278079"	"515.8"	"100.000"	"34.9211"	"8693"	"8693"	"8670"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"731.7"	""	"705.6"	""	"786.2"	""	"842.0"	""	"954.0"	"866.2"	""	"118"	"26"	"27.000"	"20.000"	"0.0143169995609863"	"19"	"0.0006037"	"0.004251"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALHELK"	"[R].lALHELk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.1111"	"0.0000"	"1"	"1"	"1"	"427.94778"	"1281.82880"	"1281.82948"	"-0.53"	"-0.00023"	"7/48"	"7"	"48"	"8822292.0748291"	"HCD"	"MS2"	"8.59974"	"405.3"	"100.000"	"36.3197"	"9310"	"9310"	"9289"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"599.5"	""	"591.8"	""	"637.7"	""	"612.2"	""	"699.6"	"699.3"	""	"118"	"9"	"27.000"	"20.000"	"0.693189557414323"	""	"0.003045"	"0.05879"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LALHELK"	"[R].lALHELk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"427.94797"	"1281.82935"	"1281.82948"	"-0.10"	"-0.00004"	"6/48"	"6"	"48"	"6326881.87677002"	"HCD"	"MS2"	"8.189059"	"256.0"	"100.000"	"36.2876"	"9254"	"9254"	"9226"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"415.4"	""	"376.7"	""	"394.8"	""	"385.4"	""	"424.6"	"428.0"	""	"118"	"4"	"27.000"	"20.000"	"2.60526563938454"	"13"	"0.008527"	"0.3612"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSMMQTK"	"[K].vSMMQTk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"641.86615"	"1282.72502"	"1282.72634"	"-1.02"	"-0.00066"	"12/60"	"12"	"60"	"3361948.37921143"	"HCD"	"MS2"	"0"	"311.4"	"100.000"	"34.8203"	"8652"	"8652"	"8622"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"432.7"	""	"413.5"	""	"376.7"	""	"487.3"	""	"594.9"	"651.4"	""	"551"	"36"	"34.000"	"27.000"	"0.0071141268251983"	"26"	"0.000523"	"0.003258"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSMMQTK"	"[K].vSMMQTk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"641.86676"	"1282.72624"	"1282.72634"	"-0.07"	"-0.00005"	"12/60"	"12"	"60"	"3439508.46136475"	"HCD"	"MS2"	"18.64635"	"314.3"	"100.000"	"34.8593"	"8711"	"8711"	"8682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"457.5"	""	"382.6"	""	"369.4"	""	"516.6"	"1.1"	"588.7"	"665.0"	""	"541"	"36"	"34.000"	"27.000"	"0.00698501381566657"	"26"	"0.0003839"	"0.001617"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFENISK"	"[K].sFENISk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"641.87335"	"1282.73943"	"1282.74072"	"-1.01"	"-0.00065"	"6/64"	"6"	"64"	"4142897.29785156"	"HCD"	"MS2"	"20.95135"	"377.0"	"100.000"	"36.2396"	"9234"	"9234"	"9210"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"582.2"	""	"514.8"	""	"506.1"	""	"594.2"	""	"680.5"	"696.3"	""	"491"	"31"	"33.000"	"26.000"	"0.021729588221347"	"25"	"0.0006037"	"0.006162"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFENISK"	"[K].sFENISk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"641.87335"	"1282.73943"	"1282.74072"	"-1.01"	"-0.00065"	"6/64"	"6"	"64"	"4784009.18841553"	"HCD"	"MS2"	"25.64265"	"424.0"	"100.000"	"36.3014"	"9303"	"9303"	"9273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"616.4"	""	"582.9"	""	"626.3"	""	"646.1"	""	"777.0"	"770.2"	""	"491"	"31"	"33.000"	"26.000"	"0.0216796115552757"	"25"	"0.0006037"	"0.004558"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTVAAIFR"	"[R].yLTVAAIFR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"641.88947"	"1282.77165"	"1282.77207"	"-0.33"	"-0.00021"	"7/64"	"7"	"64"	"2788771.98675537"	"HCD"	"MS2"	"0"	"137.9"	"100.000"	"65.9559"	"21385"	"21385"	"21363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.2"	""	"207.9"	""	"222.8"	""	"212.8"	"1.3"	"237.8"	"258.4"	""	"363"	"41"	"32.000"	"25.000"	"0.00130579989507671"	"21"	"0.0001308"	"0.0002602"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILNWIAPNL"	"[K].iLNWIAPNL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"641.88965"	"1282.77202"	"1282.77207"	"-0.04"	"-0.00003"	"6/76"	"6"	"76"	"283245.084350586"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"97.4279"	"33447"	"33447"	"33442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"6.5"	""	"10.6"	""	"9.0"	""	"8.9"	"14.8"	""	"363"	"39"	"32.000"	"25.000"	"0.00207432417764344"	"24"	"0.00103"	"0.01119"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILNWIAPNL"	"[K].iLNWIAPNL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"641.88977"	"1282.77226"	"1282.77207"	"0.15"	"0.00010"	"6/76"	"6"	"76"	"313516.219909668"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"97.2212"	"33383"	"33383"	"33379"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"10.0"	""	"9.1"	""	"12.1"	""	"10.1"	"12.9"	""	"365"	"39"	"32.000"	"25.000"	"0.00218908622824761"	"25"	"0.001007"	"0.01094"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYGGSTVK"	"[R].lYGGSTVk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.89221"	"1282.77715"	"1282.77711"	"0.03"	"0.00002"	"7/58"	"7"	"58"	"4924581.68334961"	"HCD"	"MS2"	"0"	"404.8"	"100.000"	"34.0312"	"8330"	"8330"	"8305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"655.6"	""	"614.7"	""	"627.6"	""	"608.4"	""	"656.2"	"667.4"	""	"337"	"42"	"32.000"	"25.000"	"0.00104857598051003"	"16"	"0.0001889"	"0.0005768"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYGGSTVK"	"[R].lYGGSTVk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"641.89227"	"1282.77727"	"1282.77711"	"0.13"	"0.00008"	"7/58"	"7"	"58"	"4651343.94067383"	"HCD"	"MS2"	"0"	"384.1"	"100.000"	"34.0793"	"8393"	"8393"	"8380"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"642.2"	""	"610.7"	""	"548.4"	""	"585.8"	"0.9"	"592.6"	"649.2"	""	"337"	"44"	"32.000"	"25.000"	"0.000723768879098835"	"18"	"0.0001889"	"0.0005607"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGLVK"	"[K].gFGFGLVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"641.89972"	"1282.79216"	"1282.79236"	"-0.16"	"-0.00010"	"7/58"	"7"	"58"	"11437224.6112061"	"HCD"	"MS2"	"22.10171"	"831.1"	"100.000"	"56.9192"	"17645"	"17645"	"17627"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"950.8"	""	"1210.7"	""	"1265.6"	""	"1360.3"	"11.5"	"1452.4"	"1624.0"	""	"253"	"22"	"31.000"	"24.000"	"0.0731291499968234"	""	"0.0003839"	"0.001625"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGLVK"	"[K].gFGFGLVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"641.89978"	"1282.79228"	"1282.79236"	"-0.06"	"-0.00004"	"11/58"	"11"	"58"	"11670011.1387939"	"HCD"	"MS2"	"22.33592"	"813.1"	"100.000"	"57.1247"	"17783"	"17783"	"17765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"928.0"	""	"1208.1"	""	"1219.1"	""	"1278.0"	"5.9"	"1420.5"	"1647.4"	""	"253"	"21"	"31.000"	"24.000"	"0.110176894129444"	""	"0.000523"	"0.00311"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPQLLK"	"[K].lLPQLLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50430"	"Arylsulfatase B OS=Rattus norvegicus OX=10116 GN=Arsb PE=2 SV=2"	"P50430"	"Arylsulfatase B OS=Rattus norvegicus OX=10116 GN=Arsb PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.94666"	"1282.88603"	"1282.88627"	"-0.18"	"-0.00012"	"6/56"	"6"	"56"	"6942587.64263916"	"HCD"	"MS2"	"48.58293"	"451.6"	"100.000"	"61.8075"	"19691"	"19691"	"19667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"633.4"	""	"629.8"	""	"608.8"	""	"771.1"	"39.6"	"803.4"	"791.4"	""	"43"	"12"	"23.000"	"16.000"	"0.141722387477529"	"13"	"0.003197"	"0.06558"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSHILK"	"[K].dLSHILk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"428.60718"	"1283.80698"	"1283.80874"	"-1.37"	"-0.00059"	"7/52"	"7"	"52"	"4676070.41522217"	"HCD"	"MS2"	"18.45448"	"224.3"	"100.000"	"39.5976"	"10613"	"10613"	"10582"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.0"	""	"290.1"	""	"274.8"	""	"377.4"	""	"450.3"	"464.1"	""	"195"	"24"	"29.000"	"22.000"	"0.0392649108467323"	""	"0.0009727"	"0.01077"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSHILK"	"[K].dLSHILk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"428.60730"	"1283.80735"	"1283.80874"	"-1.09"	"-0.00047"	"7/52"	"7"	"52"	"3434360.67681885"	"HCD"	"MS2"	"51.251"	"182.1"	"100.000"	"39.7345"	"10712"	"10712"	"10686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.4"	""	"223.7"	""	"220.1"	""	"319.2"	"2.4"	"360.6"	"376.1"	""	"195"	"21"	"29.000"	"22.000"	"0.0755100252857456"	"18"	"0.002804"	"0.04535"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFIGTFK"	"[R].iFIGTFk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63164"	"Small nuclear ribonucleoprotein-associated protein N OS=Rattus norvegicus OX=10116 GN=Snrpn PE=2 SV=1"	"P17136; P63164"	"Small nuclear ribonucleoprotein-associated protein B OS=Rattus norvegicus OX=10116 GN=Snrpb PE=2 SV=2; Small nuclear ribonucleoprotein-associated protein N OS=Rattus norvegicus OX=10116 GN=Snrpn PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.40948"	"1283.81169"	"1283.81277"	"-0.84"	"-0.00054"	"6/48"	"6"	"48"	"9287600.33508301"	"HCD"	"MS2"	"14.16674"	"553.3"	"100.000"	"59.4498"	"18728"	"18728"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"724.2"	""	"598.4"	""	"596.4"	""	"1036.8"	"1.0"	"1139.8"	"1158.3"	""	"168"	"15"	"29.000"	"22.000"	"0.263802730285602"	"13"	"0.001966"	"0.02831"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAYLFK"	"[R].iAAYLFk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.40973"	"1283.81218"	"1283.81277"	"-0.46"	"-0.00029"	"6/50"	"6"	"50"	"5485388.68121338"	"HCD"	"MS2"	"20.25179"	"326.7"	"100.000"	"61.9735"	"19706"	"19706"	"19689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"406.5"	""	"394.7"	""	"442.3"	""	"565.4"	"3.4"	"626.4"	"661.1"	""	"168"	"17"	"29.000"	"22.000"	"0.152854872123239"	"14"	"0.001058"	"0.01421"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAYLFK"	"[R].iAAYLFk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.41003"	"1283.81279"	"1283.81277"	"0.02"	"0.00001"	"10/50"	"10"	"50"	"12746142.9614258"	"HCD"	"MS2"	"23.95153"	"855.7"	"100.000"	"61.6601"	"19578"	"19578"	"19561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1102.0"	""	"1037.6"	""	"1145.4"	""	"1499.0"	"0.8"	"1669.5"	"1662.4"	""	"168"	"25"	"29.000"	"22.000"	"0.0240590949472153"	"14"	"0.001718"	"0.02345"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAYLFK"	"[R].iAAYLFk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.41010"	"1283.81291"	"1283.81277"	"0.12"	"0.00007"	"10/50"	"10"	"50"	"13978842.1523438"	"HCD"	"MS2"	"20.08951"	"885.6"	"100.000"	"61.8327"	"19701"	"19701"	"19683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1126.9"	""	"1115.0"	""	"1198.6"	""	"1592.5"	"2.8"	"1690.7"	"1670.4"	""	"168"	"26"	"29.000"	"22.000"	"0.0232958888790755"	"14"	"0.001879"	"0.02672"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFIGTFK"	"[R].iFIGTFk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63164"	"Small nuclear ribonucleoprotein-associated protein N OS=Rattus norvegicus OX=10116 GN=Snrpn PE=2 SV=1"	"P17136; P63164"	"Small nuclear ribonucleoprotein-associated protein B OS=Rattus norvegicus OX=10116 GN=Snrpb PE=2 SV=2; Small nuclear ribonucleoprotein-associated protein N OS=Rattus norvegicus OX=10116 GN=Snrpn PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.41016"	"1283.81304"	"1283.81277"	"0.21"	"0.00013"	"6/48"	"6"	"48"	"8782096.14916992"	"HCD"	"MS2"	"9.294449"	"532.3"	"100.000"	"59.2773"	"18604"	"18604"	"18585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"695.2"	""	"599.1"	""	"594.0"	""	"976.8"	"2.4"	"1072.8"	"1113.1"	""	"168"	"18"	"29.000"	"22.000"	"0.148689152498663"	"14"	"0.0009727"	"0.01031"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFIAPK"	"[K].iHFIAPk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"428.61194"	"1283.82126"	"1283.82400"	"-2.13"	"-0.00091"	"5/50"	"5"	"50"	"20333181.6470947"	"HCD"	"MS2"	"60.29399"	"603.2"	"100.000"	"37.2232"	"9638"	"9638"	"9608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"837.8"	""	"776.0"	""	"843.5"	""	"960.1"	""	"1197.0"	"1108.8"	""	"158"	"33"	"28.000"	"21.000"	"0.00383377915128076"	"15"	"0.0002277"	"0.001117"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFIAPK"	"[K].iHFIAPk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"428.61209"	"1283.82172"	"1283.82400"	"-1.78"	"-0.00076"	"5/50"	"5"	"50"	"24960234.3361816"	"HCD"	"MS2"	"2.960157"	"516.1"	"70.953"	"37.3555"	"9735"	"9735"	"9713"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"726.8"	""	"651.3"	""	"752.8"	""	"811.5"	"0.1"	"998.7"	"950.5"	""	"173"	"36"	"29.000"	"22.000"	"0.00194095786407209"	""	"0.0005564"	"0.003421"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPELLLK"	"[K].lPELLLk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"642.43787"	"1283.86846"	"1283.87028"	"-1.42"	"-0.00091"	"4/48"	"4"	"48"	"5017562.0423584"	"HCD"	"MS2"	"6.04716"	"232.4"	"100.000"	"65.5602"	"21223"	"21223"	"21203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"316.8"	""	"262.2"	""	"337.8"	""	"386.1"	""	"423.0"	"477.5"	""	"91"	"17"	"26.000"	"19.000"	"0.0875006736654123"	""	"0.00162"	"0.02217"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPELLLK"	"[K].lPELLLk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"642.43860"	"1283.86992"	"1283.87028"	"-0.28"	"-0.00018"	"4/48"	"4"	"48"	"4802996.44396973"	"HCD"	"MS2"	"6.240967"	"222.0"	"100.000"	"65.5866"	"21181"	"21181"	"21161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"307.6"	""	"232.4"	""	"330.0"	""	"371.0"	"6.1"	"384.5"	"472.2"	""	"91"	"17"	"26.000"	"19.000"	"0.0887179292889911"	""	"0.001217"	"0.01751"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYEVFQR"	"[K].tLYEVFQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"642.86121"	"1284.71514"	"1284.71495"	"0.14"	"0.00009"	"7/64"	"7"	"64"	"2652088.83050537"	"HCD"	"MS2"	"15.11869"	"192.7"	"100.000"	"48.2472"	"14178"	"14178"	"14159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.2"	""	"247.8"	""	"270.5"	""	"294.1"	"6.9"	"358.3"	"380.3"	""	"559"	"10"	"34.000"	"27.000"	"2.71882849045662"	"16"	"0.0005564"	"0.003592"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYEVFQR"	"[K].tLYEVFQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"642.86163"	"1284.71599"	"1284.71495"	"0.81"	"0.00052"	"6/64"	"6"	"64"	"2647788.88360596"	"HCD"	"MS2"	"14.13348"	"178.7"	"100.000"	"47.9494"	"14008"	"14008"	"13992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.0"	""	"225.3"	""	"251.0"	""	"286.7"	"5.3"	"321.5"	"357.4"	""	"545"	"31"	"34.000"	"27.000"	"0.0220478632526109"	"18"	"0.0004166"	"0.00231"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTSTVSFK"	"[R].gTSTVSFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.87042"	"1284.73357"	"1284.75637"	"-17.75"	"-0.01140"	"7/64"	"7"	"64"	"2237636.3170166"	"HCD"	"MS2"	"0"	"177.4"	"100.000"	"33.6166"	"8206"	"8206"	"8186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.0"	""	"237.7"	""	"252.3"	""	"343.9"	""	"301.3"	"312.6"	""	"558"	"3"	"34.000"	"27.000"	"13.2313513887608"	"13"	"0.001454"	"0.01992"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTSTVSFK"	"[R].gTSTVSFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.87189"	"1284.73650"	"1284.75637"	"-15.47"	"-0.00994"	"7/64"	"7"	"64"	"2450959.81555176"	"HCD"	"MS2"	"0"	"198.5"	"100.000"	"33.5180"	"8123"	"8123"	"8105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.7"	""	"258.8"	""	"291.6"	""	"378.7"	"0.1"	"330.8"	"364.6"	""	"543"	"3"	"34.000"	"27.000"	"13.3588733937514"	"13"	"0.001058"	"0.0137"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMHAINK"	"[K].iMHAINk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"642.89606"	"1284.78484"	"1284.78623"	"-1.09"	"-0.00070"	"10/52"	"10"	"52"	"2188512.5223999"	"HCD"	"MS2"	"0"	"158.1"	"100.000"	"31.9357"	"7524"	"7524"	"7498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.7"	""	"161.4"	""	"162.8"	""	"301.8"	""	"350.4"	"373.3"	""	"336"	"26"	"32.000"	"25.000"	"0.0455312194157661"	"19"	"0.0004166"	"0.002373"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMHAINK"	"[K].iMHAINk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.5357"	"0.0000"	"1"	"1"	"1"	"428.93326"	"1284.78522"	"1284.78623"	"-0.79"	"-0.00034"	"12/52"	"12"	"52"	"35386030.0386963"	"HCD"	"MS2"	"15.83247"	"814.8"	"66.800"	"31.7365"	"7400"	"7400"	"7382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"645.7"	""	"841.1"	""	"746.8"	""	"1594.0"	""	"2025.0"	"1915.7"	""	"336"	"28"	"32.000"	"25.000"	"0.0238951236236634"	""	"0.0001889"	"0.0007018"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMHAINK"	"[K].iMHAINk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.5517"	"0.0000"	"1"	"1"	"1"	"428.93347"	"1284.78586"	"1284.78623"	"-0.29"	"-0.00012"	"12/52"	"12"	"52"	"26863129.0812988"	"HCD"	"MS2"	"11.86507"	"985.1"	"100.000"	"31.8509"	"7489"	"7489"	"7466"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"834.4"	""	"1014.1"	""	"945.8"	""	"1915.0"	"0.1"	"2423.2"	"2255.0"	""	"335"	"29"	"32.000"	"25.000"	"0.0194542642818257"	""	"0.0001889"	"0.0004905"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIGTVFHR"	"[K].lLIGTVFHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"428.93768"	"1284.79850"	"1284.79896"	"-0.36"	"-0.00015"	"9/64"	"9"	"64"	"1978401.8727417"	"HCD"	"MS2"	"13.86812"	"59.5"	"100.000"	"48.6671"	"14350"	"14350"	"14319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.7"	"7.1"	"77.4"	""	"79.3"	""	"108.6"	"0.6"	"114.9"	"108.3"	""	"277"	"34"	"31.000"	"24.000"	"0.00504022325036182"	""	"0.0003839"	"0.001576"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIGTVFHR"	"[K].lLIGTVFHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"428.93768"	"1284.79850"	"1284.79896"	"-0.36"	"-0.00015"	"4/64"	"4"	"64"	"3792053.94073486"	"HCD"	"MS2"	"0"	"102.6"	"100.000"	"48.3366"	"14214"	"14214"	"14197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.4"	"7.5"	"129.2"	""	"140.2"	""	"192.8"	"1.5"	"198.0"	"187.6"	""	"277"	"23"	"31.000"	"24.000"	"0.0728533913951128"	"22"	"0.0004166"	"0.002186"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIGTVFHR"	"[K].lLIGTVFHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"0"	"3"	"3"	"0.7045"	"0.0000"	"1"	"1"	"1"	"428.93771"	"1284.79859"	"1284.79896"	"-0.29"	"-0.00012"	"10/64"	"10"	"64"	"5649823.60760498"	"HCD"	"MS2"	"25.49711"	"97.8"	"100.000"	"48.1030"	"14071"	"14071"	"14050"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.9"	"14.1"	"138.0"	""	"147.1"	""	"163.9"	""	"178.8"	"167.4"	""	"277"	"44"	"31.000"	"24.000"	"0.000604574427652629"	""	"0.0001889"	"0.0008482"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FASFIDK"	"[K].fASFIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"4"	"10"	"Q6IG05; Q6IG01; Q6IG12; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2;Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG04; Q6IG05; Q6P6Q2; Q6IG01; Q6IMF3; Q6IG12; Q4FZU2; Q6IG00; Q10758; Q6IG03"	"Keratin, type II cytoskeletal 72 OS=Rattus norvegicus OX=10116 GN=Krt72 PE=3 SV=2; Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1; Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1; Keratin, type II cytoskeletal 4 OS=Rattus norvegicus OX=10116 GN=Krt4 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3; Keratin, type II cytoskeletal 73 OS=Rattus norvegicus OX=10116 GN=Krt73 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"643.38037"	"1285.75347"	"1285.75564"	"-1.70"	"-0.00109"	"12/54"	"12"	"54"	"6737676.21447754"	"HCD"	"MS2"	"0"	"565.1"	"98.213"	"53.2579"	"16220"	"16220"	"16210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"801.1"	""	"770.1"	""	"896.7"	""	"873.2"	"1.3"	"881.7"	"1123.1"	""	"563"	"35"	"34.000"	"27.000"	"0.00879991341845393"	""	"0.0006037"	"0.004277"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYPGYK"	"[K].sLYPGYk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"429.25610"	"1285.75376"	"1285.75564"	"-1.47"	"-0.00063"	"7/48"	"7"	"48"	"5504461.81237793"	"HCD"	"MS2"	"25.31713"	"263.5"	"100.000"	"37.6472"	"9812"	"9812"	"9784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"410.2"	""	"384.0"	""	"380.2"	""	"407.9"	"10.3"	"436.3"	"463.9"	""	"563"	"9"	"34.000"	"27.000"	"3.6097605901767"	"18"	"0.001286"	"0.01896"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FASFIDK"	"[K].fASFIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"4"	"10"	"Q6IG05; Q6IG01; Q6IG12; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2;Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG04; Q6IG05; Q6P6Q2; Q6IG01; Q6IMF3; Q6IG12; Q4FZU2; Q6IG00; Q10758; Q6IG03"	"Keratin, type II cytoskeletal 72 OS=Rattus norvegicus OX=10116 GN=Krt72 PE=3 SV=2; Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1; Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1; Keratin, type II cytoskeletal 4 OS=Rattus norvegicus OX=10116 GN=Krt4 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3; Keratin, type II cytoskeletal 73 OS=Rattus norvegicus OX=10116 GN=Krt73 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"643.38068"	"1285.75408"	"1285.75564"	"-1.22"	"-0.00078"	"12/54"	"12"	"54"	"38569475.1922607"	"HCD"	"MS2"	"8.731201"	"1737.0"	"52.951"	"52.7700"	"15971"	"15971"	"15954"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2482.5"	""	"2329.5"	""	"2679.3"	""	"2747.0"	""	"2697.2"	"3510.3"	""	"563"	"35"	"34.000"	"27.000"	"0.00857982439580277"	""	"0.001966"	"0.02833"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FASFIDK"	"[K].fASFIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"4"	"10"	"Q6IG05; Q6IG01; Q6IG12; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2;Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG04; Q6IG05; Q6P6Q2; Q6IG01; Q6IMF3; Q6IG12; Q4FZU2; Q6IG00; Q10758; Q6IG03"	"Keratin, type II cytoskeletal 72 OS=Rattus norvegicus OX=10116 GN=Krt72 PE=3 SV=2; Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1; Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1; Keratin, type II cytoskeletal 4 OS=Rattus norvegicus OX=10116 GN=Krt4 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3; Keratin, type II cytoskeletal 73 OS=Rattus norvegicus OX=10116 GN=Krt73 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"643.38080"	"1285.75432"	"1285.75564"	"-1.03"	"-0.00066"	"12/54"	"12"	"54"	"53099811.519043"	"HCD"	"MS2"	"6.147698"	"2845.7"	"63.817"	"52.9751"	"16104"	"16104"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4091.2"	""	"3770.4"	""	"4323.6"	""	"4539.3"	""	"4446.4"	"5841.7"	""	"560"	"35"	"34.000"	"27.000"	"0.00861307108127398"	""	"0.002456"	"0.03689"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYPGYK"	"[K].sLYPGYk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"643.38086"	"1285.75444"	"1285.75564"	"-0.94"	"-0.00060"	"4/48"	"4"	"48"	"35950302.8046875"	"HCD"	"MS2"	"0"	"1781.8"	"71.161"	"37.6189"	"9843"	"9843"	"9825"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2933.9"	""	"2713.4"	""	"2664.5"	""	"2721.4"	""	"2880.3"	"2931.2"	""	"559"	"24"	"34.000"	"27.000"	"0.105531427363654"	"20"	"0.002361"	"0.03428"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYPGYK"	"[K].sLYPGYk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"643.38098"	"1285.75469"	"1285.75564"	"-0.75"	"-0.00048"	"4/48"	"4"	"48"	"4300935.84698486"	"HCD"	"MS2"	"0"	"344.7"	"100.000"	"37.8698"	"9903"	"9903"	"9879"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"504.6"	""	"496.6"	""	"520.4"	""	"536.0"	""	"602.3"	"603.3"	""	"560"	"24"	"34.000"	"27.000"	"0.123071652322591"	"24"	"0.0008453"	"0.008041"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYPGYK"	"[K].sLYPGYk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"643.38098"	"1285.75469"	"1285.75564"	"-0.75"	"-0.00048"	"4/48"	"4"	"48"	"4896768.27459717"	"HCD"	"MS2"	"4.761679"	"377.7"	"100.000"	"37.9400"	"9975"	"9975"	"9953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"571.0"	""	"557.0"	""	"543.4"	""	"606.7"	""	"645.4"	"651.7"	""	"560"	"24"	"34.000"	"27.000"	"0.117262198233017"	"24"	"0.0006037"	"0.006061"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FASFIDK"	"[K].fASFIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"4"	"10"	"Q6IG05; Q6IG01; Q6IG12; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2;Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG04; Q6IG05; Q6P6Q2; Q6IG01; Q6IMF3; Q6IG12; Q4FZU2; Q6IG00; Q10758; Q6IG03"	"Keratin, type II cytoskeletal 72 OS=Rattus norvegicus OX=10116 GN=Krt72 PE=3 SV=2; Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1; Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1; Keratin, type II cytoskeletal 4 OS=Rattus norvegicus OX=10116 GN=Krt4 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3; Keratin, type II cytoskeletal 73 OS=Rattus norvegicus OX=10116 GN=Krt73 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"643.38098"	"1285.75469"	"1285.75564"	"-0.75"	"-0.00048"	"12/54"	"12"	"54"	"6232144.35528564"	"HCD"	"MS2"	"0"	"571.7"	"100.000"	"53.0756"	"16094"	"16094"	"16087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"781.9"	""	"775.0"	""	"908.8"	""	"869.6"	""	"940.7"	"1138.8"	""	"560"	"35"	"34.000"	"27.000"	"0.00931446749223211"	""	"0.000523"	"0.003243"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYPGYK"	"[K].sLYPGYk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"643.38098"	"1285.75469"	"1285.75564"	"-0.75"	"-0.00048"	"4/48"	"4"	"48"	"55801123.2744141"	"HCD"	"MS2"	"0"	"1220.2"	"31.491"	"37.5419"	"9769"	"9769"	"9752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2027.5"	""	"1842.8"	""	"1789.1"	""	"1859.5"	"3.7"	"1967.1"	"2045.1"	""	"560"	"24"	"34.000"	"27.000"	"0.101428039556675"	"20"	"0.00348"	"0.07765"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNSVLGK"	"[K].lPNSVLGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"429.27866"	"1285.82141"	"1285.82439"	"-2.32"	"-0.00099"	"6/66"	"6"	"66"	"2955679.28216553"	"HCD"	"MS2"	"66.26695"	"172.0"	"100.000"	"42.8477"	"11938"	"11938"	"11915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.9"	""	"199.0"	""	"243.5"	""	"294.8"	""	"347.7"	"324.7"	""	"287"	"14"	"31.000"	"24.000"	"0.638045868818171"	"24"	"0.0006037"	"0.005172"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNSVLGK"	"[K].lPNSVLGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"643.41455"	"1285.82182"	"1285.82439"	"-2.00"	"-0.00128"	"7/66"	"7"	"66"	"39206914.5861816"	"HCD"	"MS2"	"0"	"621.6"	"29.853"	"43.0582"	"12068"	"12068"	"12051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"870.9"	""	"745.9"	""	"899.7"	""	"1027.0"	""	"1173.0"	"1175.8"	""	"287"	"35"	"31.000"	"24.000"	"0.00464356897694017"	""	"0.0008125"	"0.007617"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNSVLGK"	"[K].lPNSVLGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"643.41486"	"1285.82244"	"1285.82439"	"-1.52"	"-0.00098"	"6/66"	"6"	"66"	"39776419.3103027"	"HCD"	"MS2"	"5.5615"	"599.4"	"26.117"	"42.7973"	"11917"	"11917"	"11900"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"829.3"	""	"732.9"	""	"856.0"	""	"1008.7"	"2.1"	"1136.7"	"1114.9"	""	"287"	"45"	"31.000"	"24.000"	"0.000471902090307036"	""	"0.0006037"	"0.005761"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFLHGK"	"[K].iIFLHGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"3"	"3"	"0.4815"	"0.0000"	"1"	"1"	"1"	"429.28439"	"1285.83863"	"1285.83965"	"-0.80"	"-0.00034"	"6/50"	"6"	"50"	"7388973.50830078"	"HCD"	"MS2"	"2.399619"	"346.3"	"100.000"	"41.2058"	"11312"	"11312"	"11293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"471.5"	""	"443.1"	""	"511.2"	""	"582.1"	"0.6"	"619.3"	"652.3"	""	"198"	"27"	"29.000"	"22.000"	"0.0218089719842292"	""	"0.0004557"	"0.00253"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFLHGK"	"[K].iIFLHGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"3"	"3"	"0.4348"	"0.0000"	"1"	"1"	"1"	"429.28491"	"1285.84018"	"1285.83965"	"0.42"	"0.00018"	"5/50"	"5"	"50"	"8033462.54302979"	"HCD"	"MS2"	"15.2528"	"368.1"	"100.000"	"40.9973"	"11183"	"11183"	"11157"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"493.3"	""	"500.6"	""	"534.1"	""	"601.0"	"1.1"	"670.6"	"686.7"	""	"190"	"23"	"29.000"	"22.000"	"0.043825169583236"	""	"0.000523"	"0.002816"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAVNGK"	"[R].iLLAVNGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"643.43317"	"1285.85906"	"1285.86078"	"-1.34"	"-0.00086"	"7/62"	"7"	"62"	"2698917.69696045"	"HCD"	"MS2"	"45.0983"	"162.8"	"100.000"	"48.4934"	"14231"	"14231"	"14208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.8"	""	"226.6"	""	"234.1"	""	"244.2"	"8.8"	"289.7"	"307.5"	""	"142"	"23"	"28.000"	"21.000"	"0.0320817720506195"	""	"0.000494"	"0.002727"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVGLIAAR"	"[R].kVGLIAAR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"1"	"3"	"3"	""	"0.0000"	"1"	"1"	"3"	"429.29510"	"1285.87076"	"1285.87201"	"-0.97"	"-0.00042"	"5/72"	"5"	"72"	"16477609.6525879"	"HCD"	"MS2"	"47.1689"	"590.7"	"51.498"	"31.3140"	"7269"	"7269"	"7248"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1137.6"	""	"1185.5"	""	"897.2"	""	"813.9"	"12.0"	"710.2"	"808.1"	""	"88"	"0"	"26.000"	"19.000"	"3.98522344395208"	"13"	"0.002829"	"0.04557"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVGLIAAR"	"[R].kVGLIAAR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"429.29517"	"1285.87094"	"1285.87201"	"-0.83"	"-0.00036"	"3/72"	"3"	"72"	"16854152.0877075"	"HCD"	"MS2"	"48.43685"	"721.3"	"64.523"	"31.2015"	"7181"	"7181"	"7158"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1374.5"	""	"1443.1"	""	"1106.9"	""	"981.2"	"15.9"	"876.6"	"997.9"	""	"88"	"2"	"26.000"	"19.000"	"2.64516444492642"	"13"	"0.005353"	"0.1659"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTFTSNK"	"[R].mTFTSNk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64559"	"Cytosolic acyl coenzyme A thioester hydrolase OS=Rattus norvegicus OX=10116 GN=Acot7 PE=1 SV=4"	"Q64559"	"Cytosolic acyl coenzyme A thioester hydrolase OS=Rattus norvegicus OX=10116 GN=Acot7 PE=1 SV=4"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"643.86237"	"1286.71745"	"1286.71788"	"-0.33"	"-0.00021"	"6/56"	"6"	"56"	"2211239.23669434"	"HCD"	"MS2"	"68.45899"	"219.7"	"100.000"	"35.2147"	"8857"	"8857"	"8826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"326.0"	""	"332.1"	""	"315.8"	""	"297.5"	""	"410.3"	"405.2"	""	"684"	"10"	"35.000"	"28.000"	"3.74133077265056"	"20"	"0.000523"	"0.002983"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGNSYFK"	"[R].iGNSYFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"643.87799"	"1286.74870"	"1286.75089"	"-1.70"	"-0.00109"	"6/56"	"6"	"56"	"10032190.9291382"	"HCD"	"MS2"	"14.73598"	"904.5"	"100.000"	"39.8973"	"10777"	"10777"	"10750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1241.6"	""	"1125.9"	""	"1240.2"	""	"1577.1"	"15.0"	"1680.3"	"1692.8"	""	"702"	"20"	"35.000"	"28.000"	"0.357525577206995"	"23"	"0.0009404"	"0.01007"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGNSYFK"	"[R].iGNSYFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"643.87805"	"1286.74883"	"1286.75089"	"-1.61"	"-0.00103"	"6/56"	"6"	"56"	"10914313.2466431"	"HCD"	"MS2"	"0"	"897.1"	"94.660"	"39.7785"	"10687"	"10687"	"10661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1211.7"	""	"1119.0"	""	"1212.1"	""	"1530.4"	"10.5"	"1681.8"	"1739.6"	""	"702"	"20"	"35.000"	"28.000"	"0.317180965276528"	"23"	"0.001217"	"0.01715"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGLLSIGLR"	"[R].aASGLLSIGLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"643.90253"	"1286.79778"	"1286.79935"	"-1.22"	"-0.00079"	"10/88"	"10"	"88"	"5637256.77282715"	"HCD"	"MS2"	"29.04941"	"286.7"	"100.000"	"52.6250"	"15911"	"15911"	"15890"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"389.9"	""	"411.3"	""	"422.9"	""	"440.2"	"3.3"	"537.0"	"511.6"	""	"521"	"51"	"34.000"	"27.000"	"0.000209318554829353"	""	"0"	"2.652E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILISLATGNR"	"[R].iLISLATGNR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"643.90271"	"1286.79814"	"1286.79935"	"-0.94"	"-0.00060"	"9/80"	"9"	"80"	"3797243.41583252"	"HCD"	"MS2"	"0"	"215.0"	"100.000"	"54.0271"	"16463"	"16463"	"16445"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"236.7"	""	"301.7"	""	"313.4"	""	"364.1"	""	"413.3"	"410.1"	""	"522"	"39"	"34.000"	"27.000"	"0.00309485643271629"	""	"0"	"8.229E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILISLATGNR"	"[R].iLISLATGNR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.3250"	"0.0000"	"1"	"1"	"1"	"643.90302"	"1286.79875"	"1286.79935"	"-0.46"	"-0.00030"	"7/80"	"7"	"80"	"4723638.91784668"	"HCD"	"MS2"	"13.00153"	"232.4"	"100.000"	"54.2655"	"16614"	"16614"	"16589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"259.2"	""	"307.3"	""	"361.6"	""	"394.5"	"0.0"	"437.5"	"443.4"	""	"553"	"40"	"34.000"	"27.000"	"0.0026344813935254"	""	"0"	"0.0001287"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILISLATGNR"	"[R].iLISLATGNR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.2973"	"0.0000"	"1"	"1"	"1"	"643.90314"	"1286.79900"	"1286.79935"	"-0.27"	"-0.00018"	"7/80"	"7"	"80"	"3699367.78216553"	"HCD"	"MS2"	"18.12468"	"211.5"	"100.000"	"54.5844"	"16744"	"16744"	"16725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"265.9"	""	"269.7"	""	"301.1"	""	"318.8"	""	"421.9"	"431.0"	""	"559"	"37"	"34.000"	"27.000"	"0.00619985899334162"	""	"0"	"0.000121"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILISLATGNR"	"[R].iLISLATGNR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"643.90320"	"1286.79912"	"1286.79935"	"-0.18"	"-0.00012"	"9/80"	"9"	"80"	"4997127.40673828"	"HCD"	"MS2"	"4.251867"	"255.6"	"100.000"	"54.3071"	"16578"	"16578"	"16570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"286.5"	""	"337.3"	""	"386.7"	""	"410.9"	""	"481.4"	"524.1"	""	"558"	"39"	"34.000"	"27.000"	"0.00347219576684216"	""	"0"	"0.0001565"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGLLSIGLR"	"[R].aASGLLSIGLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"643.90356"	"1286.79985"	"1286.79935"	"0.39"	"0.00025"	"9/88"	"9"	"88"	"5390878.71948242"	"HCD"	"MS2"	"58.05571"	"281.7"	"100.000"	"52.8051"	"16035"	"16035"	"16006"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"384.2"	""	"382.0"	""	"429.2"	""	"433.1"	""	"518.3"	"522.7"	""	"558"	"47"	"34.000"	"27.000"	"0.000592385204898061"	"27"	"0"	"3.637E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVPDGLK"	"[K].lSVPDGLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.1034"	"0.0000"	"1"	"1"	"1"	"643.90668"	"1286.80608"	"1286.80841"	"-1.81"	"-0.00117"	"5/62"	"5"	"62"	"4806804.72528076"	"HCD"	"MS2"	"17.0911"	"316.7"	"100.000"	"45.7005"	"13140"	"13140"	"13134"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"394.4"	""	"349.0"	""	"389.4"	""	"550.5"	"1.0"	"678.0"	"646.5"	""	"481"	"29"	"33.000"	"26.000"	"0.0295199135093597"	""	"0.00103"	"0.01229"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNSVLGK"	"[K].lPnSVLGk.[I]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"643.90698"	"1286.80669"	"1286.80841"	"-1.34"	"-0.00086"	"6/66"	"6"	"66"	"2419491.21520996"	"HCD"	"MS2"	"18.31315"	"191.0"	"100.000"	"47.0041"	"13622"	"13622"	"13592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"268.9"	""	"222.3"	""	"253.7"	""	"292.6"	"1.8"	"396.9"	"376.0"	""	"481"	"18"	"33.000"	"26.000"	"0.347628264864396"	"26"	"0.0006037"	"0.006028"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LSVPDGLK"	"[K].lSVPDGLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.0303"	"0.0000"	"1"	"1"	"1"	"643.90729"	"1286.80730"	"1286.80841"	"-0.86"	"-0.00056"	"6/62"	"6"	"62"	"26824152.9998779"	"HCD"	"MS2"	"0.9383127"	"734.3"	"43.121"	"45.2212"	"12897"	"12897"	"12880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"814.1"	""	"700.3"	""	"794.1"	""	"1421.9"	""	"1701.4"	"1556.9"	""	"480"	"33"	"33.000"	"26.000"	"0.0133417021744897"	"24"	"0.0001889"	"0.0007462"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVPDGLK"	"[K].lSVPDGLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"429.60730"	"1286.80735"	"1286.80841"	"-0.83"	"-0.00035"	"7/62"	"7"	"62"	"3755340.33563232"	"HCD"	"MS2"	"15.64156"	"179.0"	"100.000"	"45.4761"	"13050"	"13050"	"13019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.2"	""	"173.4"	""	"184.3"	""	"371.3"	""	"413.3"	"377.8"	""	"476"	"20"	"33.000"	"26.000"	"0.228337350300792"	"22"	"0.001879"	"0.02676"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LSVPDGLK"	"[K].lSVPDGLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"643.90747"	"1286.80766"	"1286.80841"	"-0.58"	"-0.00037"	"5/62"	"5"	"62"	"28238888.0257568"	"HCD"	"MS2"	"4.467005"	"1017.9"	"61.351"	"45.4460"	"13037"	"13037"	"13019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1191.9"	""	"1014.4"	""	"1066.3"	""	"1986.2"	"0.2"	"2272.3"	"2147.4"	""	"476"	"34"	"33.000"	"26.000"	"0.00880191067877033"	"25"	"0.0005564"	"0.003538"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIAAAAAAK"	"[K].aAIAAAAAAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"429.61099"	"1286.81842"	"1286.81964"	"-0.95"	"-0.00041"	"8/74"	"8"	"74"	"14963352.5629883"	"HCD"	"MS2"	"34.57372"	"605.6"	"100.000"	"35.4029"	"8934"	"8934"	"8906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"793.1"	""	"890.9"	""	"891.0"	""	"1026.5"	""	"1069.5"	"1065.4"	""	"350"	"60"	"32.000"	"25.000"	"1.76213042049066E-05"	""	"0"	"6.105E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIAAAAAAK"	"[K].aAIAAAAAAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"429.61108"	"1286.81870"	"1286.81964"	"-0.73"	"-0.00031"	"8/74"	"8"	"74"	"12763811.2689209"	"HCD"	"MS2"	"21.79263"	"521.6"	"100.000"	"35.3843"	"8883"	"8883"	"8859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"655.3"	""	"739.8"	""	"788.2"	""	"886.1"	""	"971.5"	"901.2"	""	"346"	"60"	"32.000"	"25.000"	"1.76216310133362E-05"	""	"0"	"7.47E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIAAAAAAK"	"[K].aAIAAAAAAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"2"	"2"	"0.7656"	"0.0000"	"1"	"1"	"1"	"643.91309"	"1286.81890"	"1286.81964"	"-0.58"	"-0.00037"	"9/74"	"9"	"74"	"17861110.3303223"	"HCD"	"MS2"	"1.698243"	"985.3"	"100.000"	"35.3848"	"8926"	"8926"	"8906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1240.2"	""	"1488.8"	""	"1535.2"	""	"1667.3"	""	"1784.6"	"1621.1"	""	"346"	"64"	"32.000"	"25.000"	"7.21184033403681E-06"	""	"0"	"6.633E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIAAAAAAK"	"[K].aAIAAAAAAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"2"	"2"	"0.7656"	"0.0000"	"1"	"1"	"1"	"643.91339"	"1286.81951"	"1286.81964"	"-0.11"	"-0.00007"	"9/74"	"9"	"74"	"15836445.8293457"	"HCD"	"MS2"	"9.491703"	"929.0"	"100.000"	"35.3200"	"8857"	"8857"	"8827"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1145.4"	""	"1410.4"	""	"1403.4"	""	"1674.6"	"2.0"	"1656.3"	"1502.8"	""	"378"	"64"	"32.000"	"25.000"	"7.93344479743003E-06"	""	"0"	"8.599E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVVPAALK"	"[R].mVVPAALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"643.91620"	"1286.82512"	"1286.82704"	"-1.49"	"-0.00096"	"7/58"	"7"	"58"	"8134705.48242188"	"HCD"	"MS2"	"0"	"503.9"	"100.000"	"46.2207"	"13349"	"13349"	"13328"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"860.6"	""	"763.0"	""	"730.0"	""	"502.3"	"0.6"	"956.4"	"959.6"	""	"289"	"32"	"31.000"	"24.000"	"0.00976939899441414"	"16"	"0.0001889"	"0.001069"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVVPAALK"	"[R].mVVPAALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"643.91632"	"1286.82536"	"1286.82704"	"-1.30"	"-0.00084"	"7/58"	"7"	"58"	"5194337.42919922"	"HCD"	"MS2"	"0"	"338.6"	"100.000"	"46.2798"	"13325"	"13325"	"13304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"520.7"	""	"475.7"	""	"466.4"	""	"383.9"	"9.5"	"692.9"	"662.2"	""	"295"	"32"	"31.000"	"24.000"	"0.00945784125463113"	"17"	"0.0003146"	"0.001468"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVVPAALK"	"[R].mVVPAALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"643.91656"	"1286.82585"	"1286.82704"	"-0.92"	"-0.00059"	"7/58"	"7"	"58"	"9274585.41296387"	"HCD"	"MS2"	"0"	"597.9"	"100.000"	"45.9776"	"13201"	"13201"	"13181"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"978.1"	""	"911.3"	""	"890.1"	""	"621.2"	"5.5"	"1143.0"	"1113.7"	""	"295"	"32"	"31.000"	"24.000"	"0.00988079798889377"	"18"	"0.0003146"	"0.001408"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVVPAALK"	"[R].mVVPAALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"643.91675"	"1286.82622"	"1286.82704"	"-0.63"	"-0.00041"	"7/58"	"7"	"58"	"5835823.98498535"	"HCD"	"MS2"	"0"	"385.0"	"100.000"	"46.5373"	"13478"	"13478"	"13459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"578.8"	"4.3"	"535.6"	""	"557.6"	""	"437.5"	""	"773.8"	"764.0"	""	"295"	"32"	"31.000"	"24.000"	"0.00926386079249643"	"17"	"0.0002277"	"0.001199"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPTLSVK"	"[K].lAPTLSVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"643.92487"	"1286.84245"	"1286.84479"	"-1.82"	"-0.00117"	"7/60"	"7"	"60"	"10117741.8054199"	"HCD"	"MS2"	"16.66447"	"382.3"	"48.667"	"42.5727"	"11825"	"11825"	"11804"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"547.7"	""	"495.3"	""	"556.0"	""	"610.2"	"3.9"	"694.5"	"713.6"	""	"302"	"45"	"31.000"	"24.000"	"0.00051757935768514"	""	"0.0003571"	"0.001515"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPTLSVK"	"[K].lAPTLSVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"643.92499"	"1286.84270"	"1286.84479"	"-1.63"	"-0.00105"	"7/60"	"7"	"60"	"9362787.9921875"	"HCD"	"MS2"	"22.78229"	"376.9"	"53.464"	"42.8383"	"11978"	"11978"	"11955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"535.6"	""	"521.0"	""	"533.0"	""	"587.7"	"1.1"	"673.2"	"718.6"	""	"302"	"44"	"31.000"	"24.000"	"0.000582072320075315"	"23"	"0.0005564"	"0.003369"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGEIIK"	"[R].gLVGEIIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1;Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"643.92523"	"1286.84319"	"1286.84479"	"-1.25"	"-0.00080"	"7/56"	"7"	"56"	"12108112.5268555"	"HCD"	"MS2"	"21.12968"	"798.7"	"100.000"	"49.1465"	"14498"	"14498"	"14479"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1129.3"	""	"997.7"	""	"1118.2"	""	"1423.9"	"2.9"	"1429.0"	"1464.4"	""	"302"	"43"	"31.000"	"24.000"	"0.000824094370247818"	""	"0.0003839"	"0.001916"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGEIIK"	"[R].gLVGEIIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1;Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"643.92535"	"1286.84343"	"1286.84479"	"-1.06"	"-0.00068"	"7/56"	"7"	"56"	"11870556.3012695"	"HCD"	"MS2"	"17.18229"	"779.3"	"100.000"	"49.4170"	"14656"	"14656"	"14638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1091.7"	""	"1017.4"	""	"1087.1"	""	"1371.4"	""	"1407.7"	"1410.0"	""	"302"	"44"	"31.000"	"24.000"	"0.000580733590888484"	""	"0.0003839"	"0.001877"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGEIIK"	"[R].gLVGEIIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1;Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"3"	"643.92548"	"1286.84368"	"1286.84479"	"-0.87"	"-0.00056"	"6/56"	"6"	"56"	"2826609.34436035"	"HCD"	"MS2"	"13.43078"	"196.1"	"100.000"	"52.7244"	"16002"	"16002"	"15974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.7"	""	"250.0"	""	"274.7"	""	"303.0"	""	"377.7"	"378.3"	""	"302"	"5"	"31.000"	"24.000"	"4.94284449267046"	"16"	"0.007443"	"0.2809"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPTLSVK"	"[K].lAPTLSVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"643.92548"	"1286.84368"	"1286.84479"	"-0.87"	"-0.00056"	"7/60"	"7"	"60"	"22625813.9251709"	"HCD"	"MS2"	"32.42413"	"861.2"	"64.009"	"42.5260"	"11850"	"11850"	"11827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1340.8"	""	"1258.6"	""	"1201.0"	""	"1334.9"	""	"1480.5"	"1535.0"	""	"302"	"46"	"31.000"	"24.000"	"0.000350733256249923"	""	"0.0003839"	"0.002036"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPTLSVK"	"[K].lAPTLSVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"643.92548"	"1286.84368"	"1286.84479"	"-0.87"	"-0.00056"	"7/60"	"7"	"60"	"15359085.0240479"	"HCD"	"MS2"	"44.12785"	"981.8"	"100.000"	"42.2627"	"11698"	"11698"	"11676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1497.2"	""	"1371.1"	""	"1391.3"	""	"1620.3"	""	"1721.0"	"1697.1"	""	"302"	"44"	"31.000"	"24.000"	"0.000594260613938224"	"23"	"0.0002277"	"0.001128"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPTLSVK"	"[K].lAPTLSVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"429.61945"	"1286.84378"	"1286.84479"	"-0.78"	"-0.00034"	"5/60"	"5"	"60"	"9618093.79760742"	"HCD"	"MS2"	"2.737221"	"433.3"	"100.000"	"42.3547"	"11736"	"11736"	"11708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"606.1"	""	"607.2"	""	"624.9"	""	"714.7"	""	"775.4"	"786.7"	""	"296"	"19"	"31.000"	"24.000"	"0.204296871161227"	"18"	"0.0003571"	"0.001522"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAVNGK"	"[R].iLLAVnGk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"643.92554"	"1286.84380"	"1286.84479"	"-0.77"	"-0.00050"	"12/62"	"12"	"62"	"2634656.79162598"	"HCD"	"MS2"	"43.28659"	"171.7"	"100.000"	"52.0062"	"15658"	"15658"	"15634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.7"	""	"222.5"	""	"235.6"	""	"277.7"	"3.2"	"324.1"	"334.4"	""	"296"	"38"	"31.000"	"24.000"	"0.00248462994682139"	"23"	"0.0001889"	"0.0004265"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLNLVK"	"[R].eLLNLVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"3"	"643.92578"	"1286.84429"	"1286.84479"	"-0.40"	"-0.00025"	"6/54"	"6"	"54"	"1555235.80187988"	"HCD"	"MS2"	"0"	"125.2"	"100.000"	"54.7553"	"16761"	"16761"	"16736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.2"	""	"161.1"	""	"179.1"	""	"215.9"	""	"241.2"	"235.7"	""	"296"	"33"	"31.000"	"24.000"	"0.00778505554258246"	""	"0.0003571"	"0.001514"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAVNGK"	"[R].iLLAVnGk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"643.92578"	"1286.84429"	"1286.84479"	"-0.40"	"-0.00025"	"12/62"	"12"	"62"	"4270440.59277344"	"HCD"	"MS2"	"29.85216"	"272.7"	"100.000"	"51.4214"	"15469"	"15469"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"321.7"	""	"357.6"	""	"324.9"	""	"507.5"	"7.6"	"521.5"	"546.7"	""	"296"	"32"	"31.000"	"24.000"	"0.00889737131475252"	""	"0.0001889"	"0.0009789"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPTLSVK"	"[K].lAPTLSVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"429.61966"	"1286.84443"	"1286.84479"	"-0.29"	"-0.00012"	"5/60"	"5"	"60"	"10681703.7318115"	"HCD"	"MS2"	"2.776853"	"431.6"	"100.000"	"42.5674"	"11867"	"11867"	"11843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"651.3"	""	"623.8"	""	"626.1"	""	"709.7"	""	"727.2"	"747.8"	""	"296"	"29"	"31.000"	"24.000"	"0.0166825223513976"	"23"	"0.0001889"	"0.001063"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGEIIK"	"[R].gLVGEIIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1;Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"2"	"2"	"0.4524"	"0.0000"	"1"	"1"	"1"	"643.92621"	"1286.84514"	"1286.84479"	"0.27"	"0.00017"	"7/56"	"7"	"56"	"12036216.3282471"	"HCD"	"MS2"	"27.1753"	"542.7"	"60.062"	"49.4569"	"14625"	"14625"	"14607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"708.6"	""	"740.0"	""	"775.7"	""	"871.8"	""	"979.7"	"1068.5"	""	"296"	"42"	"31.000"	"24.000"	"0.000836106722722208"	""	"0.0004166"	"0.002272"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAVNGK"	"[R].iLLAVnGk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"643.92627"	"1286.84526"	"1286.84479"	"0.36"	"0.00023"	"7/62"	"7"	"62"	"3892043.26672363"	"HCD"	"MS2"	"36.47137"	"247.9"	"100.000"	"51.2260"	"15339"	"15339"	"15314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.8"	""	"303.7"	""	"301.9"	""	"470.4"	"0.5"	"463.8"	"513.0"	""	"293"	"33"	"31.000"	"24.000"	"0.00810657910001054"	""	"0.0001889"	"0.0008175"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGEIIK"	"[R].gLVGEIIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1;Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"2"	"2"	"0.4651"	"0.0000"	"1"	"1"	"1"	"643.92627"	"1286.84526"	"1286.84479"	"0.36"	"0.00023"	"7/56"	"7"	"56"	"18770455.6247559"	"HCD"	"MS2"	"16.17768"	"669.9"	"51.597"	"49.7009"	"14768"	"14768"	"14750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"921.6"	""	"924.2"	""	"990.9"	""	"1036.4"	""	"1210.8"	"1268.0"	""	"293"	"43"	"31.000"	"24.000"	"0.000797696386414147"	""	"0.000523"	"0.003091"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFETSAK"	"[R].fFETSAk.[AS]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P35281; P35286"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"P35281; P35286"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"644.37164"	"1287.73601"	"1287.73491"	"0.85"	"0.00055"	"12/52"	"12"	"52"	"15954562.2658081"	"HCD"	"MS2"	"12.20726"	"1306.9"	"100.000"	"40.5844"	"11057"	"11057"	"11037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1764.6"	""	"1806.2"	""	"1819.0"	""	"2120.5"	"13.4"	"2458.9"	"2402.8"	""	"825"	"36"	"36.000"	"29.000"	"0.00969223538599926"	"20"	"0.0007793"	"0.007316"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFETSAK"	"[R].fFETSAk.[AS]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P35281; P35286"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"P35281; P35286"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"644.37201"	"1287.73674"	"1287.73491"	"1.42"	"0.00092"	"12/52"	"12"	"52"	"16255441.4342041"	"HCD"	"MS2"	"12.28232"	"1333.8"	"100.000"	"40.4421"	"10955"	"10955"	"10933"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1782.5"	""	"1818.6"	""	"1851.8"	""	"2166.2"	"7.3"	"2532.0"	"2484.1"	""	"806"	"35"	"36.000"	"29.000"	"0.0141678857532904"	"20"	"0.001125"	"0.01515"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEHIGK"	"[K].vFEHIGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"429.93185"	"1287.78101"	"1287.78253"	"-1.18"	"-0.00051"	"6/48"	"6"	"48"	"7639246.3994751"	"HCD"	"MS2"	"24.74093"	"379.8"	"100.000"	"35.2696"	"8836"	"8836"	"8811"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"531.0"	""	"578.6"	""	"564.5"	""	"619.7"	""	"680.0"	"627.4"	""	"682"	"10"	"35.000"	"28.000"	"3.60374770641857"	"18"	"0.005698"	"0.1842"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEHIGK"	"[K].vFEHIGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.4571"	"0.0000"	"1"	"1"	"1"	"644.39417"	"1287.78105"	"1287.78253"	"-1.15"	"-0.00074"	"12/48"	"12"	"48"	"3283397.52947998"	"HCD"	"MS2"	"17.2681"	"259.4"	"100.000"	"35.0863"	"8804"	"8804"	"8778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.9"	""	"351.6"	""	"380.3"	""	"435.3"	""	"446.5"	"443.0"	""	"682"	"35"	"35.000"	"28.000"	"0.00983454742566172"	""	"0.000523"	"0.002771"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEHIGK"	"[K].vFEHIGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"429.93207"	"1287.78165"	"1287.78253"	"-0.68"	"-0.00029"	"5/48"	"5"	"48"	"41129324.4836426"	"HCD"	"MS2"	"33.40503"	"1208.3"	"60.637"	"34.9577"	"8708"	"8708"	"8686"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1923.8"	""	"1787.8"	""	"1776.2"	""	"1999.2"	""	"1979.9"	"1965.8"	""	"681"	"24"	"35.000"	"28.000"	"0.127091678729443"	"24"	"0.0003146"	"0.001476"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEHIGK"	"[K].vFEHIGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"429.93222"	"1287.78211"	"1287.78253"	"-0.33"	"-0.00014"	"10/48"	"10"	"48"	"64459320.4018555"	"HCD"	"MS2"	"19.7023"	"871.1"	"28.323"	"35.0291"	"8780"	"8780"	"8762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1338.4"	""	"1261.5"	""	"1266.8"	""	"1451.7"	""	"1458.8"	"1465.2"	""	"671"	"22"	"35.000"	"28.000"	"0.196649354194457"	"23"	"0.0001889"	"0.001056"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEHIGK"	"[K].vFEHIGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"644.39490"	"1287.78252"	"1287.78253"	"-0.01"	"-0.00001"	"6/48"	"6"	"48"	"2365559.44140625"	"HCD"	"MS2"	"13.40619"	"228.4"	"100.000"	"35.0792"	"8758"	"8758"	"8734"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"325.4"	""	"328.5"	""	"345.2"	""	"351.1"	""	"401.2"	"411.1"	""	"668"	"31"	"35.000"	"28.000"	"0.0259864208047295"	"24"	"0.0003146"	"0.00147"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGGTTPGK"	"[K].lVGGTTPGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"644.40436"	"1287.80144"	"1287.80366"	"-1.72"	"-0.00111"	"14/66"	"14"	"66"	"7933471.39654541"	"HCD"	"MS2"	"0"	"540.8"	"100.000"	"33.2875"	"8033"	"8033"	"8019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"909.0"	""	"767.8"	""	"761.7"	""	"824.5"	""	"894.0"	"958.5"	""	"475"	"29"	"33.000"	"26.000"	"0.0301761349987029"	"25"	"0.0003146"	"0.001442"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGGTTPGK"	"[K].lVGGTTPGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"644.40479"	"1287.80229"	"1287.80366"	"-1.06"	"-0.00068"	"6/66"	"6"	"66"	"8212379.53631592"	"HCD"	"MS2"	"0"	"563.6"	"100.000"	"33.3806"	"8112"	"8112"	"8094"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"890.1"	""	"792.8"	""	"830.7"	""	"860.2"	""	"941.0"	"1020.6"	""	"475"	"30"	"33.000"	"26.000"	"0.0226810739180091"	"25"	"0.0003571"	"0.001529"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVDGNLK"	"[K].aIVDGNLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"644.40552"	"1287.80376"	"1287.80366"	"0.08"	"0.00005"	"6/60"	"6"	"60"	"14174420.8722534"	"HCD"	"MS2"	"0"	"950.5"	"97.878"	"37.5914"	"9832"	"9832"	"9809"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1359.6"	""	"1428.2"	""	"1444.9"	""	"1367.6"	""	"1758.2"	"1647.3"	""	"483"	"14"	"33.000"	"26.000"	"0.963645139204572"	"15"	"0.0005564"	"0.003484"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIVDELK"	"[K].iIVDELk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"644.41693"	"1287.82659"	"1287.82881"	"-1.73"	"-0.00111"	"12/50"	"12"	"50"	"3388842.28869629"	"HCD"	"MS2"	"0"	"275.0"	"100.000"	"50.0950"	"14929"	"14929"	"14905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.4"	""	"314.6"	""	"320.9"	""	"457.6"	"1.7"	"614.8"	"600.1"	""	"427"	"37"	"33.000"	"26.000"	"0.004649410363974"	""	"0.0004166"	"0.002341"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIVDELK"	"[K].iIVDELk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"644.41724"	"1287.82720"	"1287.82881"	"-1.25"	"-0.00081"	"12/50"	"12"	"50"	"3712580.58416748"	"HCD"	"MS2"	"0"	"291.1"	"100.000"	"49.8270"	"14773"	"14773"	"14751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"323.2"	""	"322.8"	""	"358.3"	""	"482.5"	"1.5"	"648.6"	"630.8"	""	"424"	"32"	"33.000"	"26.000"	"0.0139744865791796"	"24"	"0.0004166"	"0.002261"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLIVK"	"[K].lEDLIVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"644.41748"	"1287.82768"	"1287.82881"	"-0.87"	"-0.00056"	"12/50"	"12"	"50"	"9549045.81274414"	"HCD"	"MS2"	"8.430009"	"624.4"	"100.000"	"57.1662"	"17800"	"17800"	"17781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"820.2"	""	"682.0"	""	"711.5"	""	"1104.2"	""	"1285.1"	"1328.1"	""	"424"	"38"	"33.000"	"26.000"	"0.00326088783744243"	""	"0.0006037"	"0.004141"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLIVK"	"[K].lEDLIVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"644.41772"	"1287.82817"	"1287.82881"	"-0.49"	"-0.00032"	"12/50"	"12"	"50"	"8807445.8671875"	"HCD"	"MS2"	"7.026346"	"579.2"	"100.000"	"56.9973"	"17677"	"17677"	"17659"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"761.9"	""	"638.9"	""	"671.0"	""	"1042.4"	""	"1158.9"	"1226.0"	""	"414"	"38"	"33.000"	"26.000"	"0.00325814452944507"	""	"0.0005564"	"0.003563"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLFLIPK"	"[K].vLFLIPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"429.96426"	"1287.87824"	"1287.88045"	"-1.72"	"-0.00074"	"6/50"	"6"	"50"	"1172769.72967529"	"HCD"	"MS2"	"11.98193"	"44.7"	"100.000"	"70.1271"	"23079"	"23079"	"23050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.2"	""	"62.7"	""	"81.5"	""	"68.1"	""	"76.7"	"84.5"	""	"81"	"19"	"26.000"	"19.000"	"0.0459679380347288"	"15"	"0.001783"	"0.02486"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLFLIPK"	"[K].vLFLIPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"429.96460"	"1287.87925"	"1287.88045"	"-0.94"	"-0.00040"	"6/50"	"6"	"50"	"1295880.20263672"	"HCD"	"MS2"	"15.11417"	"50.6"	"100.000"	"70.2025"	"23058"	"23058"	"23027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.8"	""	"75.4"	""	"74.5"	""	"88.1"	""	"88.3"	"92.4"	""	"81"	"18"	"26.000"	"19.000"	"0.0578702053196997"	"15"	"0.002804"	"0.04535"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWQVTIGTR"	"[R].vWQVTIGTR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"644.88184"	"1288.75640"	"1288.75749"	"-0.85"	"-0.00055"	"6/82"	"6"	"82"	"6044600.06329346"	"HCD"	"MS2"	"21.73531"	"356.6"	"100.000"	"46.4727"	"13404"	"13404"	"13384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"484.7"	""	"493.5"	""	"498.2"	""	"513.8"	""	"671.9"	"725.7"	""	"861"	"32"	"36.000"	"29.000"	"0.0282470537143401"	"23"	"0.0001889"	"0.0005003"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWQVTIGTR"	"[R].vWQVTIGTR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"644.88245"	"1288.75762"	"1288.75749"	"0.10"	"0.00006"	"6/82"	"6"	"82"	"6485543.04815674"	"HCD"	"MS2"	"26.82958"	"383.1"	"100.000"	"46.7299"	"13557"	"13557"	"13538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"516.3"	""	"539.9"	""	"524.3"	""	"572.3"	"2.3"	"738.0"	"739.2"	""	"805"	"31"	"36.000"	"29.000"	"0.0357080294845279"	"23"	"0.0001889"	"0.0005062"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDWSK"	"[K].vPVDWSk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"644.88538"	"1288.76348"	"1288.76654"	"-2.38"	"-0.00153"	"5/52"	"5"	"52"	"10719803.8441162"	"HCD"	"MS2"	"25.65268"	"643.1"	"100.000"	"44.1581"	"12463"	"12463"	"12438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"737.5"	""	"762.3"	""	"808.5"	""	"1071.0"	""	"1353.6"	"1381.5"	""	"844"	"31"	"36.000"	"29.000"	"0.0349391593086605"	"20"	"0.00103"	"0.0119"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDWSK"	"[K].vPVDWSk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"644.88580"	"1288.76433"	"1288.76654"	"-1.72"	"-0.00111"	"5/52"	"5"	"52"	"11833387.1412354"	"HCD"	"MS2"	"7.562349"	"711.8"	"96.345"	"44.4315"	"12624"	"12624"	"12604"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"806.1"	""	"842.6"	""	"860.2"	""	"1218.4"	""	"1496.8"	"1542.4"	""	"864"	"33"	"36.000"	"29.000"	"0.0199289192210084"	"21"	"0.0007793"	"0.007348"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPTWLK"	"[R].sVPTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"644.90387"	"1288.80046"	"1288.80293"	"-1.91"	"-0.00123"	"6/54"	"6"	"54"	"38863104.5222168"	"HCD"	"MS2"	"14.94174"	"1248.3"	"50.830"	"47.9030"	"14037"	"14037"	"14018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1741.7"	""	"1869.5"	""	"1931.2"	""	"1945.8"	""	"2223.4"	"2107.7"	""	"593"	"33"	"34.000"	"27.000"	"0.0150669274719206"	"23"	"0.001966"	"0.02759"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPTWLK"	"[R].sVPTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"644.90393"	"1288.80058"	"1288.80293"	"-1.82"	"-0.00117"	"6/54"	"6"	"54"	"45574525.4460449"	"HCD"	"MS2"	"0"	"909.3"	"31.113"	"47.6416"	"13882"	"13882"	"13864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1265.7"	""	"1358.1"	""	"1431.8"	""	"1440.7"	""	"1593.9"	"1516.3"	""	"589"	"33"	"34.000"	"27.000"	"0.0143246922076135"	"26"	"0.001718"	"0.02338"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDVIGTK"	"[K].vVDVIGTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"644.91364"	"1288.81999"	"1288.82406"	"-3.15"	"-0.00203"	"6/64"	"6"	"64"	"6494420.85412598"	"HCD"	"MS2"	"8.406038"	"492.8"	"100.000"	"42.4528"	"11820"	"11820"	"11795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"658.5"	""	"668.2"	""	"681.2"	""	"833.7"	"10.2"	"914.3"	"903.9"	""	"426"	"21"	"33.000"	"26.000"	"0.157535923587405"	"19"	"0.0003839"	"0.002018"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDVIGTK"	"[K].vVDVIGTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"644.91388"	"1288.82048"	"1288.82406"	"-2.78"	"-0.00179"	"7/64"	"7"	"64"	"7017879.73077393"	"HCD"	"MS2"	"5.956929"	"548.5"	"100.000"	"42.1844"	"11666"	"11666"	"11644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"751.1"	""	"733.7"	""	"723.1"	""	"914.3"	"1.6"	"1012.2"	"1062.6"	""	"426"	"50"	"33.000"	"26.000"	"0.000217961407355801"	""	"0.0001889"	"0.0006648"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTVLEK"	"[K].lQTVLEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.3548"	"0.0000"	"1"	"1"	"1"	"644.91443"	"1288.82158"	"1288.82406"	"-1.92"	"-0.00124"	"6/64"	"6"	"64"	"8270489.41296387"	"HCD"	"MS2"	"0"	"684.4"	"100.000"	"43.0698"	"12024"	"12024"	"12013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"970.3"	""	"997.8"	""	"1107.4"	""	"1066.4"	"2.2"	"1155.7"	"1175.1"	""	"452"	"31"	"33.000"	"26.000"	"0.0162595469028836"	""	"0.00103"	"0.01279"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLELSK"	"[R].lQLELSk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"644.91589"	"1288.82451"	"1288.82406"	"0.35"	"0.00023"	"6/62"	"6"	"62"	"11579542.8214722"	"HCD"	"MS2"	"3.813619"	"815.7"	"100.000"	"47.7834"	"13988"	"13988"	"13970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"808.3"	""	"909.4"	""	"756.3"	""	"1357.0"	""	"1844.2"	"2098.5"	""	"437"	"31"	"33.000"	"26.000"	"0.0173161540709983"	""	"0.0007793"	"0.007386"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLELSK"	"[R].lQLELSk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"644.91614"	"1288.82500"	"1288.82406"	"0.73"	"0.00047"	"6/62"	"6"	"62"	"11905407.8422241"	"HCD"	"MS2"	"7.325932"	"853.1"	"100.000"	"47.5243"	"13834"	"13834"	"13816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"902.5"	""	"986.4"	""	"869.0"	""	"1396.6"	""	"1865.4"	"2109.8"	""	"354"	"31"	"32.000"	"25.000"	"0.0151346808180589"	""	"0.0007793"	"0.007412"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLSGLLK"	"[K].sLLSGLLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47196"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1"	"P47196"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"644.93433"	"1288.86138"	"1288.86044"	"0.72"	"0.00047"	"12/62"	"12"	"62"	"2449767.26348877"	"HCD"	"MS2"	"32.645"	"157.6"	"100.000"	"62.8358"	"20111"	"20111"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.2"	""	"201.2"	""	"237.1"	""	"286.5"	""	"288.8"	"290.2"	""	"148"	"35"	"28.000"	"21.000"	"0.00256585269334873"	""	"0.0001889"	"0.001104"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLSGLLK"	"[K].sLLSGLLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47196"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1"	"P47196"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"644.93439"	"1288.86150"	"1288.86044"	"0.82"	"0.00053"	"7/62"	"7"	"62"	"2191850.17510986"	"HCD"	"MS2"	"23.95022"	"146.7"	"100.000"	"62.7359"	"20017"	"20017"	"19993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.6"	""	"194.2"	""	"203.0"	""	"269.1"	""	"282.9"	"257.3"	""	"148"	"31"	"28.000"	"21.000"	"0.00647487993668303"	""	"0.0001889"	"0.0009497"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDWFLNR"	"[K].iPDWFLNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"645.36334"	"1289.71941"	"1289.72037"	"-0.75"	"-0.00048"	"7/58"	"7"	"58"	"6767570.47033691"	"HCD"	"MS2"	"2.53678"	"206.1"	"100.000"	"66.5745"	"21637"	"21637"	"21619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.8"	""	"307.2"	""	"348.3"	""	"354.1"	""	"343.3"	"303.0"	""	"977"	"22"	"36.000"	"29.000"	"0.318320470498722"	"24"	"0.000523"	"0.00297"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDWFLNR"	"[K].iPDWFLNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"645.36340"	"1289.71953"	"1289.72037"	"-0.65"	"-0.00042"	"7/58"	"7"	"58"	"6751100.13476563"	"HCD"	"MS2"	"0.575679"	"172.0"	"74.634"	"66.6421"	"21612"	"21612"	"21593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.6"	""	"256.5"	""	"296.8"	""	"289.2"	""	"290.9"	"256.5"	""	"977"	"22"	"36.000"	"29.000"	"0.323492762058311"	"22"	"0.0004166"	"0.00227"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDWFLNR"	"[K].iPDWFLNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"645.36340"	"1289.71953"	"1289.72037"	"-0.65"	"-0.00042"	"7/58"	"7"	"58"	"9786526.52490234"	"HCD"	"MS2"	"38.34135"	"354.7"	"100.000"	"66.2701"	"21513"	"21513"	"21491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"460.2"	""	"447.8"	""	"519.5"	""	"633.0"	""	"681.5"	"627.6"	""	"977"	"17"	"36.000"	"29.000"	"1.05405814387108"	"23"	"0.0006396"	"0.006195"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDWFLNR"	"[K].iPDWFLNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"645.36383"	"1289.72038"	"1289.72037"	"0.01"	"0.00001"	"7/58"	"7"	"58"	"9143494.10687256"	"HCD"	"MS2"	"35.42733"	"350.0"	"100.000"	"66.3283"	"21484"	"21484"	"21465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"448.2"	""	"474.6"	""	"510.2"	""	"619.1"	""	"639.8"	"629.6"	""	"965"	"16"	"36.000"	"29.000"	"1.25746908787447"	"20"	"0.0006037"	"0.004296"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPPGFSPFR"	"[R].rPPGFSPFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"430.58112"	"1289.72879"	"1289.73161"	"-2.18"	"-0.00094"	"8/80"	"8"	"80"	"24830415.3654785"	"HCD"	"MS2"	"21.93029"	"499.8"	"45.421"	"33.1409"	"7975"	"7975"	"7960"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"674.4"	""	"759.6"	""	"730.6"	""	"768.8"	""	"875.6"	"927.2"	""	"1018"	"27"	"37.000"	"30.000"	"0.104886062585443"	"14"	"0.0003571"	"0.00152"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPPGFSPFR"	"[R].rPPGFSPFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08934"	"Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"430.58124"	"1289.72916"	"1289.73161"	"-1.90"	"-0.00082"	"8/80"	"8"	"80"	"25943140.0224609"	"HCD"	"MS2"	"16.57891"	"357.5"	"32.850"	"33.2274"	"8052"	"8052"	"8042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"495.0"	""	"569.0"	""	"498.2"	""	"574.5"	""	"587.8"	"662.2"	""	"1020"	"27"	"37.000"	"30.000"	"0.110807760122051"	"14"	"0.0002723"	"0.001363"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSELNQK"	"[K].lSELNQk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"645.39453"	"1289.78179"	"1289.78292"	"-0.88"	"-0.00057"	"6/54"	"6"	"54"	"2667089.69848633"	"HCD"	"MS2"	"6.904265"	"252.2"	"100.000"	"35.6208"	"8980"	"8980"	"8955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"354.5"	""	"311.0"	""	"298.7"	""	"358.0"	""	"486.7"	"586.8"	""	"695"	"30"	"35.000"	"28.000"	"0.0325053471766274"	"25"	"0.0003839"	"0.001742"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSELNQK"	"[K].lSELNQk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"645.39484"	"1289.78240"	"1289.78292"	"-0.41"	"-0.00026"	"6/54"	"6"	"54"	"2528743.62774658"	"HCD"	"MS2"	"0"	"238.3"	"100.000"	"35.6965"	"9054"	"9054"	"9033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.2"	""	"286.7"	""	"294.2"	""	"346.7"	""	"460.6"	"531.4"	""	"681"	"30"	"35.000"	"28.000"	"0.0331220429696057"	"25"	"0.0003839"	"0.001663"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSSLGITR"	"[K].tLLSSLGITR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"645.40277"	"1289.79827"	"1289.79902"	"-0.58"	"-0.00038"	"8/88"	"8"	"88"	"39609901.3466797"	"HCD"	"MS2"	"0"	"355.6"	"20.578"	"57.7368"	"17980"	"17980"	"17963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"504.4"	""	"538.8"	""	"559.7"	""	"608.5"	""	"543.2"	"609.3"	""	"610"	"47"	"34.000"	"27.000"	"0.000551188108433333"	""	"0.0001308"	"0.0002565"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSSLGITR"	"[K].tLLSSLGITR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"645.40326"	"1289.79924"	"1289.79902"	"0.17"	"0.00011"	"8/88"	"8"	"88"	"11039012.2827148"	"HCD"	"MS2"	"37.3915"	"439.1"	"100.000"	"57.4421"	"17859"	"17859"	"17835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"630.9"	""	"683.4"	""	"687.5"	""	"725.7"	"0.7"	"688.6"	"734.4"	""	"605"	"45"	"34.000"	"27.000"	"0.000872419529695798"	""	"0"	"0.0001112"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSSLGITR"	"[K].tLLSSLGITR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"645.40350"	"1289.79973"	"1289.79902"	"0.55"	"0.00036"	"8/88"	"8"	"88"	"7883424.60894775"	"HCD"	"MS2"	"50.77967"	"342.5"	"100.000"	"57.6180"	"17985"	"17985"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"469.9"	""	"530.4"	""	"557.8"	""	"573.9"	"1.3"	"545.1"	"560.0"	""	"596"	"47"	"34.000"	"27.000"	"0.000537299286776152"	"21"	"0"	"0.0001022"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSSLGITR"	"[K].tLLSSLGITR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"645.40356"	"1289.79985"	"1289.79902"	"0.65"	"0.00042"	"8/88"	"8"	"88"	"45861774.2902832"	"HCD"	"MS2"	"0.1990467"	"476.3"	"26.220"	"57.9035"	"18102"	"18102"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"698.4"	""	"734.1"	""	"727.2"	""	"821.3"	""	"704.3"	"824.1"	""	"596"	"45"	"34.000"	"27.000"	"0.000929429096059992"	"20"	"0.0001889"	"0.0003762"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSSLGITR"	"[K].tLLSSLGITR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"645.40369"	"1289.80010"	"1289.79902"	"0.84"	"0.00054"	"8/88"	"8"	"88"	"1374203.60253906"	"HCD"	"MS2"	"0"	"101.6"	"100.000"	"50.4511"	"15022"	"15022"	"14999"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.1"	""	"138.9"	""	"128.9"	""	"166.3"	"0.6"	"198.8"	"202.1"	""	"596"	"46"	"34.000"	"27.000"	"0.000726467623873888"	"20"	"0.0001308"	"0.0002298"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLSQASK"	"[K].vVLSQASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"645.41199"	"1289.81670"	"1289.81931"	"-2.02"	"-0.00130"	"14/68"	"14"	"68"	"4975452.73522949"	"HCD"	"MS2"	"0"	"325.2"	"100.000"	"34.2399"	"8414"	"8414"	"8389"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"414.6"	""	"377.0"	""	"424.6"	""	"622.6"	""	"651.9"	"594.0"	""	"510"	"51"	"34.000"	"27.000"	"0.000207749592425314"	"21"	"0.0001889"	"0.0005856"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLSQASK"	"[K].vVLSQASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"645.41315"	"1289.81902"	"1289.81931"	"-0.23"	"-0.00015"	"14/68"	"14"	"68"	"4745201.355896"	"HCD"	"MS2"	"16.07569"	"314.5"	"100.000"	"34.2834"	"8475"	"8475"	"8452"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"406.4"	""	"376.5"	""	"435.1"	""	"588.3"	"1.8"	"603.9"	"569.6"	""	"491"	"51"	"33.000"	"26.000"	"0.000206087426690512"	"21"	"0.0001889"	"0.0004959"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELLVMK"	"[K].vELLVMk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"645.41718"	"1289.82707"	"1289.82670"	"0.29"	"0.00019"	"12/48"	"12"	"48"	"5314604.87310791"	"HCD"	"MS2"	"48.29048"	"365.7"	"100.000"	"58.0203"	"18095"	"18095"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"535.6"	""	"563.4"	""	"562.9"	""	"474.8"	""	"646.0"	"685.1"	""	"368"	"35"	"32.000"	"25.000"	"0.00551845903493728"	""	"0.0004166"	"0.002322"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELLVMK"	"[K].vELLVMk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"645.41766"	"1289.82805"	"1289.82670"	"1.05"	"0.00067"	"6/48"	"6"	"48"	"4757003.34020996"	"HCD"	"MS2"	"37.2757"	"340.8"	"100.000"	"58.2281"	"18234"	"18234"	"18213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"480.8"	""	"502.9"	""	"555.3"	""	"460.9"	""	"611.3"	"619.8"	""	"359"	"32"	"32.000"	"25.000"	"0.0110424248651421"	""	"0.0006037"	"0.005847"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAGAGK"	"[K].kAAGAGk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"430.62106"	"1289.84864"	"1289.85083"	"-1.70"	"-0.00073"	"6/62"	"6"	"62"	"14077462.286438"	"HCD"	"MS2"	"10.69079"	"1305.2"	"100.000"	"22.3189"	"3638"	"3638"	"3625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1938.3"	""	"1897.2"	""	"2067.6"	""	"2197.9"	""	"2177.3"	"2072.1"	""	"203"	"7"	"30.000"	"23.000"	"2.23597035999926"	"14"	"0.001454"	"0.01981"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAGAGK"	"[K].kAAGAGk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"430.62119"	"1289.84900"	"1289.85083"	"-1.42"	"-0.00061"	"6/62"	"6"	"62"	"9587251.21905518"	"HCD"	"MS2"	"18.73952"	"951.1"	"100.000"	"22.2999"	"3664"	"3664"	"3656"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1492.4"	""	"1328.9"	""	"1451.2"	""	"1645.6"	""	"1596.5"	"1487.3"	""	"203"	"6"	"30.000"	"23.000"	"2.59099182220117"	"14"	"0.0006737"	"0.006703"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAGGAK"	"[R].kAAGGAk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"1"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"645.42822"	"1289.84917"	"1289.85083"	"-1.29"	"-0.00083"	"6/62"	"6"	"62"	"2010904.39398193"	"HCD"	"MS2"	"0"	"134.8"	"100.000"	"21.8527"	"3456"	"3456"	"3432"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.6"	""	"254.5"	""	"311.3"	""	"142.6"	""	"210.0"	"125.6"	""	"197"	"28"	"29.000"	"22.000"	"0.0144356462334157"	""	"0.001488"	"0.02043"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAGAGK"	"[K].kAAGAGk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"430.62128"	"1289.84928"	"1289.85083"	"-1.21"	"-0.00052"	"5/62"	"5"	"62"	"1752725.55499268"	"HCD"	"MS2"	"0"	"207.5"	"100.000"	"22.5834"	"3772"	"3772"	"3766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"304.6"	""	"306.6"	""	"341.4"	""	"324.0"	"3.5"	"364.7"	"318.1"	""	"197"	"2"	"29.000"	"22.000"	"5.85377776236338"	"13"	"0.0006037"	"0.00517"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAGAGK"	"[K].kAAGAGk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"645.42834"	"1289.84941"	"1289.85083"	"-1.10"	"-0.00071"	"6/62"	"6"	"62"	"952123.878112793"	"HCD"	"MS2"	"0"	"64.8"	"100.000"	"22.3204"	"3672"	"3672"	"3656"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.2"	""	"99.2"	""	"99.5"	""	"110.7"	""	"109.1"	"101.0"	""	"197"	"19"	"29.000"	"22.000"	"0.117067469402546"	""	"0.0006037"	"0.005784"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAGAGK"	"[K].kAAGAGk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"645.42834"	"1289.84941"	"1289.85083"	"-1.10"	"-0.00071"	"6/62"	"6"	"62"	"1236473.34484863"	"HCD"	"MS2"	"0"	"85.8"	"100.000"	"22.3467"	"3648"	"3648"	"3637"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.3"	""	"120.9"	""	"134.8"	""	"138.8"	""	"141.4"	"138.4"	""	"197"	"25"	"29.000"	"22.000"	"0.0293383868298775"	""	"0.0006037"	"0.005978"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAGAGK"	"[K].kAAGAGk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"645.42896"	"1289.85063"	"1289.85083"	"-0.15"	"-0.00010"	"6/62"	"6"	"62"	"844211.270751953"	"HCD"	"MS2"	"0"	"60.4"	"100.000"	"22.3073"	"3633"	"3633"	"3612"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.5"	""	"80.5"	""	"91.5"	""	"104.6"	""	"96.1"	"103.2"	""	"194"	"14"	"29.000"	"22.000"	"0.363723812178119"	"19"	"0.004726"	"0.1371"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAGGAK"	"[R].kAAGGAk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"1"	"2"	"2"	"0.3667"	"0.0000"	"1"	"1"	"1"	"645.42920"	"1289.85112"	"1289.85083"	"0.22"	"0.00014"	"6/62"	"6"	"62"	"1923524.95654297"	"HCD"	"MS2"	"0"	"130.5"	"100.000"	"21.8661"	"3495"	"3495"	"3471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"221.3"	""	"239.9"	""	"286.1"	""	"143.9"	""	"216.4"	"127.6"	""	"194"	"30"	"29.000"	"22.000"	"0.0101337861264418"	""	"0.001966"	"0.0304"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVWGMQTR"	"[K].aIVWGMQTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"645.86249"	"1290.71770"	"1290.71899"	"-1.00"	"-0.00065"	"7/68"	"7"	"68"	"12680238.6950073"	"HCD"	"MS2"	"39.30017"	"574.7"	"72.382"	"43.7978"	"12365"	"12365"	"12348"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"833.3"	""	"815.4"	""	"873.4"	""	"798.3"	""	"1019.7"	"1106.1"	""	"906"	"47"	"36.000"	"29.000"	"0.000924907288935298"	"20"	"0.0001889"	"0.0005412"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVMEAAAK"	"[K].iVMEAAAk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"645.89520"	"1290.78313"	"1290.78556"	"-1.89"	"-0.00122"	"12/56"	"12"	"56"	"3811814.67053223"	"HCD"	"MS2"	"0"	"315.4"	"100.000"	"38.5357"	"10220"	"10220"	"10193"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"477.9"	""	"470.9"	""	"482.5"	""	"418.8"	""	"522.9"	"613.4"	""	"670"	"39"	"35.000"	"28.000"	"0.00463494736955546"	"28"	"0.0001889"	"0.0005766"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVMEAAAK"	"[K].iVMEAAAk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"645.89545"	"1290.78362"	"1290.78556"	"-1.51"	"-0.00097"	"12/56"	"12"	"56"	"3784019.14123535"	"HCD"	"MS2"	"0"	"305.4"	"100.000"	"38.4313"	"10134"	"10134"	"10103"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"433.4"	""	"468.4"	""	"476.7"	""	"364.1"	""	"573.0"	"579.8"	""	"670"	"39"	"35.000"	"28.000"	"0.00465634131456473"	"28"	"0.0001889"	"0.0007138"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEVASSVK"	"[R].iEVASSVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"645.90417"	"1290.80107"	"1290.80332"	"-1.74"	"-0.00113"	"7/64"	"7"	"64"	"2267577.05871582"	"HCD"	"MS2"	"40.76587"	"190.2"	"100.000"	"36.7251"	"9477"	"9477"	"9446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.3"	""	"253.4"	""	"290.9"	""	"304.2"	"3.5"	"359.9"	"334.6"	""	"580"	"45"	"34.000"	"27.000"	"0.000898251596772808"	"19"	"0.0001889"	"0.0005491"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IEVASSVK"	"[R].iEVASSVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"645.90466"	"1290.80205"	"1290.80332"	"-0.99"	"-0.00064"	"5/64"	"5"	"64"	"2469576.23052979"	"HCD"	"MS2"	"52.96415"	"205.4"	"100.000"	"46.0763"	"13290"	"13290"	"13273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.5"	""	"253.3"	""	"262.4"	""	"298.7"	"1.3"	"377.0"	"379.8"	""	"580"	"10"	"34.000"	"27.000"	"2.62662454260478"	"22"	"0.005635"	"0.1822"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISSIGLK"	"[R].dISSIGLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"645.90472"	"1290.80217"	"1290.80332"	"-0.89"	"-0.00058"	"7/62"	"7"	"62"	"7827493.64526367"	"HCD"	"MS2"	"23.80953"	"589.9"	"92.464"	"44.1140"	"12494"	"12494"	"12476"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"881.3"	""	"796.3"	""	"854.1"	""	"890.4"	"0.1"	"1067.8"	"1097.4"	""	"580"	"45"	"34.000"	"27.000"	"0.000936263295296665"	"24"	"0.0003839"	"0.001816"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISSIGLK"	"[R].dISSIGLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"645.90491"	"1290.80254"	"1290.80332"	"-0.61"	"-0.00039"	"7/62"	"7"	"62"	"8117457.33453369"	"HCD"	"MS2"	"25.29028"	"631.1"	"100.000"	"43.8067"	"12319"	"12319"	"12303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"931.6"	""	"861.2"	""	"898.9"	""	"976.6"	""	"1119.7"	"1196.0"	""	"556"	"47"	"34.000"	"27.000"	"0.000613825315779253"	"25"	"0.0001889"	"0.000782"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEVASSVK"	"[R].iEVASSVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"645.90564"	"1290.80400"	"1290.80332"	"0.53"	"0.00034"	"7/64"	"7"	"64"	"2694490.95001221"	"HCD"	"MS2"	"60.93449"	"213.7"	"100.000"	"36.6041"	"9384"	"9384"	"9354"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"281.8"	""	"273.8"	""	"316.3"	""	"364.0"	""	"414.2"	"379.0"	""	"465"	"33"	"33.000"	"26.000"	"0.011814707039533"	"17"	"0.0001889"	"0.0006514"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPIFK"	"[K].tNLPIFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"645.91223"	"1290.81719"	"1290.81858"	"-1.08"	"-0.00070"	"5/58"	"5"	"58"	"5030191.67498779"	"HCD"	"MS2"	"6.4416"	"377.7"	"100.000"	"48.9144"	"14403"	"14403"	"14383"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"528.1"	""	"529.5"	""	"580.9"	""	"599.8"	"1.0"	"662.2"	"674.7"	""	"372"	"29"	"32.000"	"25.000"	"0.0209176525157849"	""	"0.0006037"	"0.003681"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPIFK"	"[K].tNLPIFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"645.91235"	"1290.81743"	"1290.81858"	"-0.89"	"-0.00057"	"5/58"	"5"	"58"	"9032942.4050293"	"HCD"	"MS2"	"31.49549"	"656.6"	"100.000"	"48.6037"	"14276"	"14276"	"14255"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"948.8"	""	"951.2"	""	"966.9"	""	"1099.4"	"2.2"	"1123.0"	"1122.5"	""	"372"	"30"	"32.000"	"25.000"	"0.0207258783248062"	""	"0.0006037"	"0.005836"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYLPAIK"	"[R].qYLPAIk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"645.91260"	"1290.81792"	"1290.81858"	"-0.51"	"-0.00033"	"10/62"	"10"	"62"	"23756070.1065674"	"HCD"	"MS2"	"16.10582"	"981.6"	"62.492"	"42.3316"	"11726"	"11726"	"11708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1208.7"	""	"1139.5"	""	"903.3"	""	"2056.2"	"7.4"	"2172.5"	"1839.0"	""	"368"	"26"	"32.000"	"25.000"	"0.0469697039689669"	"20"	"0.001058"	"0.01442"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPIFK"	"[K].tNLPIFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"645.91266"	"1290.81804"	"1290.81858"	"-0.42"	"-0.00027"	"5/58"	"5"	"58"	"8738951.7144165"	"HCD"	"MS2"	"29.18396"	"623.9"	"100.000"	"48.8715"	"14433"	"14433"	"14415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"930.2"	""	"897.4"	""	"915.2"	""	"1002.0"	"5.1"	"1083.7"	"1070.8"	""	"368"	"29"	"32.000"	"25.000"	"0.0210289613601318"	""	"0.001058"	"0.01428"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPIFK"	"[K].tNLPIFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"645.91302"	"1290.81877"	"1290.81858"	"0.15"	"0.00010"	"6/58"	"6"	"58"	"6142206.55029297"	"HCD"	"MS2"	"1.688559"	"455.3"	"100.000"	"49.1823"	"14560"	"14560"	"14542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"658.0"	""	"651.2"	""	"701.2"	""	"700.3"	""	"791.0"	"810.6"	""	"368"	"32"	"32.000"	"25.000"	"0.0108596998751619"	""	"0.0007793"	"0.007316"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVNLVK"	"[R].fLVNLVk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"645.93005"	"1290.85283"	"1290.85497"	"-1.65"	"-0.00107"	"12/56"	"12"	"56"	"4922506.94384766"	"HCD"	"MS2"	"9.24334"	"328.2"	"100.000"	"62.9302"	"20149"	"20149"	"20131"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"535.3"	""	"575.9"	""	"514.2"	""	"511.2"	""	"492.7"	"472.1"	""	"61"	"36"	"24.000"	"17.000"	"0.000735021155749412"	""	"0.001158"	"0.01535"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVNLVK"	"[R].fLVNLVk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"645.93042"	"1290.85356"	"1290.85497"	"-1.09"	"-0.00070"	"12/56"	"12"	"56"	"3780060.20782471"	"HCD"	"MS2"	"6.250111"	"257.1"	"100.000"	"63.2452"	"20278"	"20278"	"20259"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.2"	""	"420.7"	""	"365.4"	""	"411.6"	"3.6"	"440.7"	"401.3"	""	"61"	"36"	"24.000"	"17.000"	"0.000805934670983194"	"17"	"0.00103"	"0.0117"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVNLVK"	"[R].fLVNLVk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"645.93097"	"1290.85466"	"1290.85497"	"-0.23"	"-0.00015"	"12/56"	"12"	"56"	"3546040.82116699"	"HCD"	"MS2"	"0"	"242.5"	"100.000"	"63.1523"	"20187"	"20187"	"20169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.7"	""	"394.8"	""	"385.6"	""	"353.5"	""	"390.0"	"395.9"	""	"61"	"34"	"24.000"	"17.000"	"0.00113579470407643"	"16"	"0.0006737"	"0.006607"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVNLVK"	"[R].fLVNLVk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"645.93176"	"1290.85625"	"1290.85497"	"0.99"	"0.00064"	"12/56"	"12"	"56"	"6379617.00067139"	"HCD"	"MS2"	"2.689505"	"425.0"	"100.000"	"62.8466"	"20062"	"20062"	"20041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"726.6"	""	"743.0"	""	"652.9"	""	"616.6"	"0.5"	"656.8"	"616.5"	""	"57"	"36"	"24.000"	"17.000"	"0.000671189045910363"	""	"0.0006037"	"0.006155"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGPGMTK"	"[K].nLGPGmTk.[M]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"646.37476"	"1291.74224"	"1291.74443"	"-1.70"	"-0.00110"	"5/70"	"5"	"70"	"284228.283996582"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"29.2595"	"6388"	"6388"	"6358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.2"	""	"34.5"	""	"39.3"	""	"50.5"	""	"57.0"	"47.5"	""	"914"	"12"	"36.000"	"29.000"	"3.15439590354991"	"15"	"0.006939"	"0.2626"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPITGFGK"	"[K].nPITGFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"646.39172"	"1291.77617"	"1291.77744"	"-0.98"	"-0.00064"	"5/70"	"5"	"70"	"9206201.23718262"	"HCD"	"MS2"	"6.626765"	"586.9"	"86.109"	"40.8297"	"11114"	"11114"	"11093"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"744.1"	""	"789.7"	""	"809.2"	""	"938.4"	"1.8"	"1088.1"	"1193.8"	""	"716"	"33"	"35.000"	"28.000"	"0.0188748290389371"	"21"	"0.0001889"	"0.001105"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPITGFGK"	"[K].nPITGFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"646.39191"	"1291.77654"	"1291.77744"	"-0.70"	"-0.00045"	"7/70"	"7"	"70"	"10668083.9242554"	"HCD"	"MS2"	"1.484161"	"635.4"	"84.444"	"40.9651"	"11214"	"11214"	"11197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"820.2"	""	"871.2"	""	"835.1"	""	"954.6"	"0.2"	"1213.3"	"1333.7"	""	"709"	"36"	"35.000"	"28.000"	"0.0096742262400545"	"22"	"0.0001889"	"0.001072"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPITGFGK"	"[K].nPITGFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"431.26389"	"1291.77710"	"1291.77744"	"-0.26"	"-0.00011"	"10/70"	"10"	"70"	"13746159.4420166"	"HCD"	"MS2"	"46.14503"	"527.9"	"100.000"	"40.7196"	"11113"	"11113"	"11085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"661.2"	""	"727.1"	""	"711.2"	""	"748.9"	"4.4"	"1028.5"	"1128.5"	""	"677"	"26"	"35.000"	"28.000"	"0.0821407517185398"	"18"	"0.0001889"	"0.000862"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPITGFGK"	"[K].nPITGFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"431.26401"	"1291.77747"	"1291.77744"	"0.02"	"0.00001"	"10/70"	"10"	"70"	"14317864.2122192"	"HCD"	"MS2"	"44.0772"	"545.1"	"100.000"	"40.5683"	"11007"	"11007"	"10981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"695.9"	""	"741.6"	""	"759.5"	""	"789.3"	"5.3"	"999.4"	"1179.1"	""	"681"	"28"	"35.000"	"28.000"	"0.0518939962667978"	"19"	"0.0001889"	"0.000763"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPITGFGK"	"[K].nPITGFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"646.39246"	"1291.77764"	"1291.77744"	"0.15"	"0.00010"	"7/70"	"7"	"70"	"91544875.3688965"	"HCD"	"MS2"	"0.4424905"	"1421.4"	"24.921"	"40.5064"	"10982"	"10982"	"10965"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1829.8"	""	"1964.8"	""	"1848.9"	""	"2064.0"	"1.2"	"2611.6"	"3164.2"	""	"680"	"36"	"35.000"	"28.000"	"0.00825047432328021"	"22"	"0.0006037"	"0.004485"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPITGFGK"	"[K].nPITGFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"646.39270"	"1291.77812"	"1291.77744"	"0.53"	"0.00034"	"7/70"	"7"	"70"	"75315163.8153076"	"HCD"	"MS2"	"2.070698"	"1702.3"	"34.460"	"40.6574"	"11087"	"11087"	"11069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2230.3"	""	"2358.8"	""	"2229.5"	""	"2501.7"	""	"3125.3"	"3718.7"	""	"674"	"36"	"35.000"	"28.000"	"0.00838744916261166"	"22"	"0.0006037"	"0.004134"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPELSLK"	"[R].fPELSLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"646.40442"	"1291.80156"	"1291.80260"	"-0.80"	"-0.00052"	"5/52"	"5"	"52"	"13335135.3287964"	"HCD"	"MS2"	"53.39656"	"593.4"	"83.376"	"57.0142"	"17738"	"17738"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"962.9"	""	"832.0"	""	"968.3"	""	"807.5"	""	"986.9"	"1064.0"	""	"434"	"14"	"33.000"	"26.000"	"0.892194894796814"	"21"	"0.005102"	"0.1551"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESPLLFK"	"[K].eSPLLFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3600"	"0.0000"	"1"	"1"	"1"	"646.40460"	"1291.80193"	"1291.80260"	"-0.52"	"-0.00033"	"6/50"	"6"	"50"	"42459624.8980713"	"HCD"	"MS2"	"32.85913"	"1608.0"	"55.501"	"47.8327"	"13961"	"13961"	"13944"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1946.4"	""	"1887.4"	""	"1877.0"	""	"2920.4"	""	"3222.3"	"3436.0"	""	"434"	"25"	"33.000"	"26.000"	"0.0708695595813969"	""	"0.00175"	"0.0238"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNFLAK"	"[K].qLNFLAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"646.40485"	"1291.80242"	"1291.81383"	"-8.83"	"-0.00571"	"6/62"	"6"	"62"	"12411912.2017822"	"HCD"	"MS2"	"6.816612"	"946.9"	"100.000"	"48.1327"	"14083"	"14083"	"14064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1291.4"	""	"1235.2"	""	"1209.8"	""	"1631.0"	""	"1760.4"	"1853.0"	""	"434"	"26"	"33.000"	"26.000"	"0.0578708330201162"	""	"0.003788"	"0.08974"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESPLLFK"	"[K].eSPLLFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"646.40485"	"1291.80242"	"1291.80260"	"-0.14"	"-0.00009"	"6/50"	"6"	"50"	"45211035.2875977"	"HCD"	"MS2"	"38.08155"	"1199.8"	"42.009"	"48.1010"	"14118"	"14118"	"14098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1500.6"	""	"1420.3"	""	"1387.8"	""	"2201.9"	"4.7"	"2355.3"	"2518.6"	""	"434"	"23"	"33.000"	"26.000"	"0.110524799019411"	""	"0.001966"	"0.03009"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNFLAK"	"[K].qLNFLAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"646.40540"	"1291.80351"	"1291.81383"	"-7.98"	"-0.00516"	"6/62"	"6"	"62"	"14221198.7321777"	"HCD"	"MS2"	"12.48628"	"586.2"	"56.671"	"48.4080"	"14243"	"14243"	"14226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"823.4"	""	"808.4"	""	"762.2"	""	"970.5"	"0.6"	"1075.2"	"1114.7"	""	"447"	"26"	"33.000"	"26.000"	"0.0601558028677666"	""	"0.00252"	"0.03861"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFQQAVK"	"[K].iFQQAVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"646.40961"	"1291.81194"	"1291.81383"	"-1.46"	"-0.00095"	"12/58"	"12"	"58"	"9483085.07922363"	"HCD"	"MS2"	"14.4591"	"518.1"	"75.357"	"39.8767"	"10768"	"10768"	"10750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"591.5"	""	"562.9"	""	"437.2"	""	"1425.5"	"2.9"	"974.6"	"921.1"	""	"380"	"36"	"32.000"	"25.000"	"0.00525718912628187"	""	"0.0006037"	"0.004316"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFQQAVK"	"[K].iFQQAVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"646.40985"	"1291.81243"	"1291.81383"	"-1.09"	"-0.00070"	"12/58"	"12"	"58"	"9067219.09118652"	"HCD"	"MS2"	"5.709257"	"563.9"	"84.240"	"39.7625"	"10680"	"10680"	"10661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"662.8"	""	"583.7"	""	"479.5"	""	"1555.8"	"4.6"	"1046.7"	"1015.9"	""	"380"	"34"	"32.000"	"25.000"	"0.00788412681005289"	""	"0.0008453"	"0.008092"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNFLAK"	"[K].qLNFLAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"646.41052"	"1291.81377"	"1291.81383"	"-0.05"	"-0.00003"	"12/62"	"12"	"62"	"8180430.35900879"	"HCD"	"MS2"	"0"	"670.1"	"100.000"	"48.4430"	"14210"	"14210"	"14192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"916.9"	""	"901.3"	""	"897.1"	""	"1128.7"	""	"1259.2"	"1249.1"	""	"383"	"35"	"32.000"	"25.000"	"0.00562559908350633"	"20"	"0.0006737"	"0.006666"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNFLAK"	"[K].qLNFLAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"646.41101"	"1291.81474"	"1291.81383"	"0.71"	"0.00046"	"12/62"	"12"	"62"	"9114249.62200928"	"HCD"	"MS2"	"1.31122"	"660.2"	"100.000"	"48.7175"	"14370"	"14370"	"14351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"919.4"	""	"893.9"	""	"877.7"	""	"1086.5"	""	"1222.8"	"1260.9"	""	"381"	"37"	"32.000"	"25.000"	"0.00363827045756869"	"21"	"0.0008731"	"0.008536"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEILFLK"	"[K].aEILFLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"646.42285"	"1291.83843"	"1291.83898"	"-0.43"	"-0.00028"	"5/48"	"5"	"48"	"1532689.36474609"	"HCD"	"MS2"	"12.16252"	"103.1"	"100.000"	"62.3577"	"19863"	"19863"	"19833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.1"	""	"133.0"	""	"163.3"	""	"148.8"	""	"201.3"	"216.4"	""	"191"	"11"	"29.000"	"22.000"	"0.785241730699453"	"19"	"0.002424"	"0.03587"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLLLFK"	"[K].vTLLLFk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5PQR8"	"EKC/KEOPS complex subunit Tprkb OS=Rattus norvegicus OX=10116 GN=Tprkb PE=2 SV=1"	"Q5PQR8"	"EKC/KEOPS complex subunit Tprkb OS=Rattus norvegicus OX=10116 GN=Tprkb PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.44080"	"1291.87432"	"1291.87537"	"-0.81"	"-0.00053"	"6/48"	"6"	"48"	"1125400.51116943"	"HCD"	"MS2"	"51.45034"	"59.3"	"100.000"	"71.4138"	"23604"	"23604"	"23578"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.8"	""	"81.2"	""	"107.4"	""	"86.0"	""	"108.8"	"105.1"	""	"34"	"14"	"22.000"	"15.000"	"0.0610167288896509"	"13"	"0.0009727"	"0.0104"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"646.86566"	"1292.72405"	"1292.72844"	"-3.40"	"-0.00220"	"12/60"	"12"	"60"	"1843163.73498535"	"HCD"	"MS2"	"10.08121"	"168.0"	"100.000"	"30.1172"	"6739"	"6739"	"6714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.1"	""	"219.9"	""	"225.4"	""	"249.5"	""	"332.4"	"312.9"	""	"946"	"32"	"36.000"	"29.000"	"0.0299130805700952"	"28"	"0.0002277"	"0.001342"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGTLETK"	"[K].vSGTLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.1786"	"0.0000"	"1"	"1"	"1"	"646.89130"	"1292.77532"	"1292.78259"	"-5.62"	"-0.00364"	"7/66"	"7"	"66"	"1453568.59918213"	"HCD"	"MS2"	"0"	"141.4"	"100.000"	"32.5015"	"7713"	"7713"	"7688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.9"	""	"170.6"	""	"173.3"	""	"244.0"	""	"298.9"	"300.2"	""	"649"	"28"	"35.000"	"28.000"	"0.0560034395950821"	""	"0.0001889"	"0.0006618"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGTLETK"	"[K].vSGTLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.3200"	"0.0000"	"1"	"1"	"1"	"646.89160"	"1292.77593"	"1292.78259"	"-5.15"	"-0.00333"	"7/66"	"7"	"66"	"1317112.19970703"	"HCD"	"MS2"	"0"	"132.4"	"100.000"	"32.6174"	"7803"	"7803"	"7782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.1"	""	"162.3"	""	"158.0"	""	"226.6"	""	"273.0"	"294.4"	""	"675"	"25"	"35.000"	"28.000"	"0.100293728571158"	""	"0.0001889"	"0.0008964"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQFLVEK"	"[R].aQFLVEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"646.90155"	"1292.79582"	"1292.79784"	"-1.56"	"-0.00101"	"6/58"	"6"	"58"	"7185902.88012695"	"HCD"	"MS2"	"28.05389"	"589.9"	"100.000"	"42.2992"	"11757"	"11757"	"11742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"671.2"	""	"801.5"	""	"805.1"	""	"1035.0"	""	"1111.0"	"1179.7"	""	"472"	"26"	"33.000"	"26.000"	"0.059417175495109"	""	"0.0006037"	"0.0052"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQFLVEK"	"[R].aQFLVEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"646.90155"	"1292.79582"	"1292.79784"	"-1.56"	"-0.00101"	"6/58"	"6"	"58"	"7175289.75402832"	"HCD"	"MS2"	"37.10629"	"615.4"	"100.000"	"42.0766"	"11622"	"11622"	"11607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"740.5"	""	"813.9"	""	"852.7"	""	"1046.1"	""	"1159.3"	"1233.1"	""	"472"	"26"	"33.000"	"26.000"	"0.0623608466727979"	""	"0.0006037"	"0.004862"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFLADGK"	"[R].aIFLADGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"646.90167"	"1292.79607"	"1292.79784"	"-1.37"	"-0.00089"	"7/56"	"7"	"56"	"14689181.5491943"	"HCD"	"MS2"	"2.085305"	"525.1"	"48.586"	"46.3167"	"13340"	"13340"	"13320"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"797.6"	""	"737.8"	""	"762.9"	""	"772.6"	""	"899.3"	"1001.8"	""	"472"	"48"	"33.000"	"26.000"	"0.000363004495111516"	"26"	"0.0001889"	"0.001007"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEAVFGK"	"[K].aLEAVFGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"646.90167"	"1292.79607"	"1292.79784"	"-1.37"	"-0.00089"	"7/56"	"7"	"56"	"10920460.7433472"	"HCD"	"MS2"	"2.350284"	"805.3"	"100.000"	"52.9058"	"16026"	"16026"	"16002"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"986.3"	""	"869.9"	""	"819.8"	""	"1614.1"	"28.8"	"1624.3"	"1706.4"	""	"472"	"46"	"33.000"	"26.000"	"0.000586019412849755"	""	"0.0001889"	"0.001062"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEAVFGK"	"[K].aLEAVFGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"646.90167"	"1292.79607"	"1292.79784"	"-1.37"	"-0.00089"	"7/56"	"7"	"56"	"12190662.6069946"	"HCD"	"MS2"	"16.75318"	"890.9"	"100.000"	"53.0836"	"16149"	"16149"	"16118"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1070.4"	""	"932.4"	""	"837.6"	""	"1857.1"	"29.4"	"1833.9"	"1905.3"	""	"472"	"46"	"33.000"	"26.000"	"0.000539401317596602"	""	"0.0001889"	"0.0009678"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFLADGK"	"[R].aIFLADGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"646.90186"	"1292.79643"	"1292.79784"	"-1.09"	"-0.00070"	"7/56"	"7"	"56"	"10053999.5864868"	"HCD"	"MS2"	"0"	"554.7"	"72.301"	"46.6153"	"13510"	"13510"	"13490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"812.6"	""	"770.8"	""	"843.8"	""	"822.4"	""	"944.6"	"1058.8"	""	"472"	"46"	"33.000"	"26.000"	"0.00057797892507536"	""	"0.0001889"	"0.000758"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFLADGK"	"[R].aIFLADGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"646.90192"	"1292.79656"	"1292.79784"	"-1.00"	"-0.00064"	"7/56"	"7"	"56"	"8449757.18029785"	"HCD"	"MS2"	"0"	"661.5"	"100.000"	"46.3009"	"13382"	"13382"	"13360"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1065.8"	""	"972.9"	""	"973.6"	""	"1005.0"	""	"1084.2"	"1161.5"	""	"472"	"48"	"33.000"	"26.000"	"0.000368054390667161"	"26"	"0.0001889"	"0.0006959"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFLADGK"	"[R].aIFLADGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"646.90314"	"1292.79900"	"1292.79784"	"0.89"	"0.00058"	"7/56"	"7"	"56"	"6594835.1282959"	"HCD"	"MS2"	"0"	"507.4"	"100.000"	"46.0277"	"13222"	"13222"	"13197"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"809.8"	""	"786.8"	""	"729.9"	""	"793.5"	""	"818.3"	"862.6"	""	"455"	"48"	"33.000"	"26.000"	"0.000355616088700817"	"26"	"0.0001889"	"0.0005995"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASTLTTK"	"[R].lASTLTTk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"646.91260"	"1292.81792"	"1292.81897"	"-0.82"	"-0.00053"	"7/64"	"7"	"64"	"7873031.13208008"	"HCD"	"MS2"	"0"	"623.8"	"100.000"	"37.9193"	"9967"	"9967"	"9937"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"737.8"	""	"874.7"	""	"889.9"	""	"954.7"	"3.0"	"1206.5"	"1250.7"	""	"294"	"47"	"31.000"	"24.000"	"0.000277534728317155"	""	"0.0001889"	"0.0008031"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASTLTTK"	"[R].lASTLTTk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"646.91278"	"1292.81828"	"1292.81897"	"-0.53"	"-0.00034"	"7/64"	"7"	"64"	"9231538.70092773"	"HCD"	"MS2"	"6.420051"	"697.0"	"100.000"	"37.8629"	"9900"	"9900"	"9879"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"840.9"	""	"915.1"	""	"953.1"	""	"1140.3"	"3.9"	"1320.5"	"1438.3"	""	"294"	"39"	"31.000"	"24.000"	"0.00195126985286272"	"23"	"0.0003839"	"0.001767"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQVSFK"	"[K].iLQVSFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"646.91931"	"1292.83135"	"1292.83423"	"-2.23"	"-0.00144"	"6/56"	"6"	"56"	"2117362.7444458"	"HCD"	"MS2"	"0"	"182.2"	"100.000"	"53.4455"	"16291"	"16291"	"16281"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.6"	""	"193.2"	""	"200.8"	""	"343.3"	""	"373.6"	"394.9"	""	"144"	"24"	"28.000"	"21.000"	"0.027818422347893"	""	"0.0006037"	"0.003762"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAQLYK"	"[K].lVAQLYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"646.92017"	"1292.83306"	"1292.83423"	"-0.91"	"-0.00059"	"6/56"	"6"	"56"	"24249713.7116089"	"HCD"	"MS2"	"15.37292"	"1262.7"	"73.367"	"45.5311"	"13072"	"13072"	"13051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2044.4"	""	"1780.4"	""	"1845.2"	""	"1984.9"	"17.7"	"2084.4"	"2186.4"	""	"144"	"33"	"28.000"	"21.000"	"0.00384001124751088"	"20"	"0.00175"	"0.02417"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAQLYK"	"[K].lVAQLYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"646.92029"	"1292.83330"	"1292.83423"	"-0.72"	"-0.00047"	"12/56"	"12"	"56"	"4779978.39337158"	"HCD"	"MS2"	"0"	"389.6"	"100.000"	"45.8173"	"13186"	"13186"	"13170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"582.5"	""	"551.2"	""	"599.0"	""	"569.3"	""	"691.7"	"697.9"	""	"142"	"35"	"28.000"	"21.000"	"0.00217399403792038"	"20"	"0.0006037"	"0.005075"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAQLYK"	"[K].lVAQLYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"646.92041"	"1292.83354"	"1292.83423"	"-0.53"	"-0.00034"	"12/56"	"12"	"56"	"23622364.8360596"	"HCD"	"MS2"	"5.122763"	"1104.1"	"66.991"	"45.2991"	"12929"	"12929"	"12912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1788.7"	""	"1576.6"	""	"1620.3"	""	"1699.1"	"3.9"	"1776.8"	"1976.7"	""	"142"	"33"	"28.000"	"21.000"	"0.00343762380984711"	"20"	"0.001966"	"0.03097"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAQLYK"	"[K].lVAQLYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"646.92090"	"1292.83452"	"1292.83423"	"0.22"	"0.00015"	"12/56"	"12"	"56"	"4042095.81750488"	"HCD"	"MS2"	"8.514894"	"335.0"	"100.000"	"45.5852"	"13041"	"13041"	"13027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"495.1"	""	"493.2"	""	"499.3"	""	"498.5"	"2.5"	"582.7"	"600.1"	""	"142"	"34"	"28.000"	"21.000"	"0.00317145350427184"	"19"	"0.0004557"	"0.002554"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEVIEK"	"[R].fAEVIEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"647.39276"	"1293.77825"	"1293.78186"	"-2.79"	"-0.00181"	"12/54"	"12"	"54"	"2454960.15185547"	"HCD"	"MS2"	"0"	"220.8"	"100.000"	"44.4331"	"12575"	"12575"	"12555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"329.2"	""	"315.2"	""	"327.4"	""	"328.8"	""	"382.4"	"409.1"	""	"525"	"35"	"34.000"	"27.000"	"0.00910184232437895"	""	"0.0003839"	"0.001736"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEELGK"	"[K].lFEELGk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"647.39282"	"1293.77837"	"1293.78186"	"-2.70"	"-0.00175"	"6/50"	"6"	"50"	"9473469.73352051"	"HCD"	"MS2"	"7.666951"	"541.4"	"71.736"	"52.9792"	"16056"	"16056"	"16034"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"752.3"	""	"671.0"	""	"716.3"	""	"911.4"	""	"1026.3"	"1056.9"	""	"518"	"31"	"34.000"	"27.000"	"0.0225060751185152"	""	"0.0006737"	"0.006449"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEELGK"	"[K].lFEELGk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.4242"	"0.0000"	"1"	"1"	"1"	"647.39288"	"1293.77849"	"1293.78186"	"-2.60"	"-0.00168"	"6/50"	"6"	"50"	"8043383.63043213"	"HCD"	"MS2"	"11.11624"	"484.1"	"75.807"	"53.1776"	"16187"	"16187"	"16166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"671.8"	""	"596.0"	""	"643.4"	""	"813.2"	"3.8"	"934.2"	"927.6"	""	"537"	"33"	"34.000"	"27.000"	"0.0120765891038848"	""	"0.0006037"	"0.006151"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAELFEK"	"[K].vAELFEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"647.39447"	"1293.78166"	"1293.78186"	"-0.15"	"-0.00010"	"5/54"	"5"	"54"	"4586698.51501465"	"HCD"	"MS2"	"19.6614"	"371.0"	"100.000"	"51.5001"	"15451"	"15451"	"15426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.7"	""	"503.8"	""	"526.8"	""	"595.0"	""	"627.8"	"682.9"	""	"507"	"32"	"34.000"	"27.000"	"0.0167485789069925"	""	"0.0004166"	"0.002239"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAELFEK"	"[K].vAELFEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"647.39453"	"1293.78179"	"1293.78186"	"-0.06"	"-0.00004"	"5/54"	"5"	"54"	"4937401.3505249"	"HCD"	"MS2"	"18.22347"	"401.9"	"100.000"	"51.6976"	"15582"	"15582"	"15558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"627.5"	""	"532.8"	""	"570.6"	""	"638.6"	"0.8"	"714.1"	"720.1"	""	"507"	"32"	"34.000"	"27.000"	"0.0165568595096134"	""	"0.0004166"	"0.0023"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEVIEK"	"[R].fAEVIEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"647.39465"	"1293.78203"	"1293.78186"	"0.13"	"0.00009"	"12/54"	"12"	"54"	"2772513.23376465"	"HCD"	"MS2"	"0"	"238.7"	"100.000"	"44.6901"	"12729"	"12729"	"12705"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.6"	""	"332.6"	""	"349.5"	""	"336.6"	"1.3"	"421.3"	"452.1"	""	"513"	"33"	"34.000"	"27.000"	"0.0131548944993785"	""	"0.0004166"	"0.002311"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMPHLK"	"[R].lPMPHLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"431.94159"	"1293.81021"	"1293.81172"	"-1.16"	"-0.00050"	"6/50"	"6"	"50"	"26310842.994873"	"HCD"	"MS2"	"44.82885"	"387.4"	"41.501"	"40.8186"	"11153"	"11153"	"11133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"450.1"	""	"540.2"	""	"558.3"	""	"567.2"	""	"776.1"	"786.9"	""	"261"	"31"	"31.000"	"24.000"	"0.00930273204315109"	""	"0.0001889"	"0.001043"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMPHLK"	"[R].lPMPHLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"431.94168"	"1293.81049"	"1293.81172"	"-0.95"	"-0.00041"	"6/50"	"6"	"50"	"25579731.3289795"	"HCD"	"MS2"	"43.36401"	"493.5"	"50.279"	"40.6329"	"11033"	"11033"	"11013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"593.7"	""	"692.9"	""	"707.0"	""	"741.5"	""	"965.4"	"987.5"	""	"261"	"23"	"31.000"	"24.000"	"0.0680159097992131"	"23"	"0.0002723"	"0.001387"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMPHLK"	"[R].lPMPHLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.4091"	"0.0000"	"1"	"1"	"1"	"431.94202"	"1293.81150"	"1293.81172"	"-0.17"	"-0.00007"	"5/50"	"5"	"50"	"10688904.8179321"	"HCD"	"MS2"	"9.37412"	"364.7"	"77.102"	"40.9421"	"11160"	"11160"	"11141"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"429.3"	""	"483.1"	""	"520.0"	""	"562.3"	"2.7"	"738.1"	"725.7"	""	"252"	"22"	"31.000"	"24.000"	"0.0752264461095635"	""	"0.0003839"	"0.001557"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMPHLK"	"[R].lPMPHLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.4348"	"0.0000"	"1"	"1"	"1"	"431.94241"	"1293.81269"	"1293.81172"	"0.75"	"0.00032"	"5/50"	"5"	"50"	"8782573.71679688"	"HCD"	"MS2"	"4.348427"	"368.1"	"100.000"	"41.1346"	"11283"	"11283"	"11261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.0"	""	"509.1"	""	"553.7"	""	"565.4"	"2.0"	"714.3"	"722.4"	""	"249"	"23"	"30.000"	"23.000"	"0.0563857486980008"	""	"0.0001889"	"0.0009442"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNIFANLFK"	"[M].gNIFANLFk.[G]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P84079"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2"	"P84079"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"647.87140"	"1294.73552"	"1294.73569"	"-0.13"	"-0.00008"	"5/80"	"5"	"80"	"273309.880004883"	"HCD"	"MS2"	"49.50152"	"10.1"	"100.000"	"93.3596"	"32214"	"32214"	"32207"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.1"	""	"13.8"	""	"16.4"	""	"23.1"	""	"13.2"	"17.5"	""	"683"	"31"	"35.000"	"28.000"	"0.0278221512993117"	"19"	"0.001846"	"0.02635"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNIFANLFK"	"[M].gNIFANLFk.[G]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P84079"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2"	"P84079"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.87158"	"1294.73589"	"1294.73569"	"0.15"	"0.00010"	"6/80"	"6"	"80"	"225842.21472168"	"HCD"	"MS2"	"34.75035"	"10.1"	"100.000"	"93.2211"	"32141"	"32141"	"32136"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.9"	""	"11.6"	""	"16.9"	""	"17.2"	""	"18.9"	"19.6"	""	"697"	"34"	"35.000"	"28.000"	"0.0141972026814733"	"15"	"0.0004166"	"0.002298"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEFFQLLR"	"[K].iEFFQLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.88947"	"1294.77165"	"1294.77207"	"-0.32"	"-0.00021"	"7/62"	"7"	"62"	"960328.835754395"	"HCD"	"MS2"	"100"	"53.8"	"100.000"	"76.8717"	"25769"	"25769"	"25751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.5"	""	"79.4"	""	"83.8"	""	"87.2"	""	"97.9"	"94.5"	""	"478"	"10"	"33.000"	"26.000"	"2.20494571089988"	"13"	"0.0006037"	"0.004498"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEFFQLLR"	"[K].iEFFQLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"Q63184"	"Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus OX=10116 GN=Eif2ak2 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"647.88953"	"1294.77178"	"1294.77207"	"-0.23"	"-0.00015"	"5/62"	"5"	"62"	"1313782.94763184"	"HCD"	"MS2"	"24.61887"	"66.1"	"100.000"	"76.8381"	"25806"	"25806"	"25786"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.2"	""	"86.6"	""	"108.5"	""	"113.1"	""	"108.0"	"123.4"	""	"478"	"18"	"33.000"	"26.000"	"0.419177439940181"	"21"	"0.0003571"	"0.001507"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGALTAEK"	"[R].fGALTAEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"647.89069"	"1294.77410"	"1294.77711"	"-2.33"	"-0.00151"	"7/60"	"7"	"60"	"6556472.74633789"	"HCD"	"MS2"	"0"	"578.2"	"100.000"	"41.5452"	"11451"	"11451"	"11437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"840.0"	""	"818.6"	""	"843.2"	""	"895.6"	"6.3"	"1024.6"	"1046.8"	""	"487"	"40"	"33.000"	"26.000"	"0.00246887422426882"	""	"0.000523"	"0.003124"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAQTLEK"	"[R].fAQTLEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.1622"	"0.0000"	"1"	"1"	"1"	"647.89191"	"1294.77654"	"1294.77711"	"-0.44"	"-0.00029"	"12/60"	"12"	"60"	"18863361.8531494"	"HCD"	"MS2"	"0"	"1522.7"	"100.000"	"38.8197"	"10336"	"10336"	"10318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2495.3"	""	"2353.0"	""	"2399.9"	""	"2135.1"	""	"2408.7"	"2607.7"	""	"469"	"37"	"33.000"	"26.000"	"0.00495613179841693"	""	"0.0008453"	"0.007987"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAQTLEK"	"[R].fAQTLEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.1622"	"0.0000"	"1"	"1"	"1"	"647.89215"	"1294.77703"	"1294.77711"	"-0.06"	"-0.00004"	"12/60"	"12"	"60"	"17086062.0550537"	"HCD"	"MS2"	"0"	"1313.9"	"100.000"	"38.7109"	"10248"	"10248"	"10230"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2168.6"	""	"1989.7"	""	"2038.1"	""	"1917.9"	""	"2064.2"	"2243.8"	""	"467"	"37"	"33.000"	"26.000"	"0.00459501448646548"	""	"0.00103"	"0.01186"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDK"	"[R].nISFNDk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"648.37128"	"1295.73528"	"1295.73597"	"-0.54"	"-0.00035"	"6/66"	"6"	"66"	"20845599.416626"	"HCD"	"MS2"	"100"	"579.2"	"32.787"	"36.7280"	"9435"	"9435"	"9418"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"677.6"	""	"651.2"	""	"754.0"	""	"1105.5"	""	"1163.1"	"1147.8"	""	"675"	"11"	"35.000"	"28.000"	"2.55431102069579"	"21"	"0.001966"	"0.02835"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDK"	"[R].nISFNDk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"648.37183"	"1295.73638"	"1295.73597"	"0.31"	"0.00020"	"6/66"	"6"	"66"	"13850255.8405151"	"HCD"	"MS2"	"6.252019"	"865.7"	"72.774"	"36.8562"	"9530"	"9530"	"9510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1081.4"	""	"977.7"	""	"979.4"	""	"1609.7"	"12.9"	"1792.3"	"1767.7"	""	"657"	"21"	"35.000"	"28.000"	"0.259737929297943"	"23"	"0.00119"	"0.01629"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDFPSMK"	"[K].lDFPSMk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"648.37488"	"1295.74248"	"1295.74337"	"-0.68"	"-0.00044"	"6/54"	"6"	"54"	"10169319.7925415"	"HCD"	"MS2"	"47.05949"	"674.1"	"100.000"	"51.6063"	"15494"	"15494"	"15474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1043.8"	""	"1005.9"	""	"1013.9"	""	"778.4"	""	"1190.5"	"1358.1"	""	"607"	"24"	"34.000"	"27.000"	"0.115920086199954"	""	"0.001846"	"0.02648"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDFPSMK"	"[K].lDFPSMk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.3462"	"0.0000"	"1"	"1"	"1"	"648.37512"	"1295.74297"	"1295.74337"	"-0.31"	"-0.00020"	"6/54"	"6"	"54"	"11011882.4255371"	"HCD"	"MS2"	"33.2167"	"736.4"	"100.000"	"51.8403"	"15640"	"15640"	"15622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1121.0"	""	"1076.0"	""	"1105.2"	""	"874.2"	""	"1301.2"	"1501.3"	""	"607"	"26"	"34.000"	"27.000"	"0.0809391604682269"	""	"0.001286"	"0.01891"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQVSVNK"	"[K].yQVSVNk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"648.38940"	"1295.77153"	"1295.77236"	"-0.64"	"-0.00041"	"6/58"	"6"	"58"	"1990849.39819336"	"HCD"	"MS2"	"0"	"190.9"	"100.000"	"33.8320"	"8294"	"8294"	"8266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"296.0"	""	"214.4"	""	"195.5"	""	"345.0"	"2.2"	"385.8"	"372.7"	""	"427"	"26"	"33.000"	"26.000"	"0.0597582511741936"	"24"	"0.0003839"	"0.002076"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQVSVNK"	"[K].yQVSVNk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"648.38953"	"1295.77178"	"1295.77236"	"-0.45"	"-0.00029"	"6/58"	"6"	"58"	"2355405.49365234"	"HCD"	"MS2"	"0"	"199.6"	"100.000"	"33.7104"	"8201"	"8201"	"8174"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"291.6"	""	"256.0"	""	"221.5"	""	"372.3"	"0.1"	"406.5"	"344.2"	""	"441"	"32"	"33.000"	"26.000"	"0.0127470178452961"	"23"	"0.0002277"	"0.001241"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSNISAAK"	"[R].fSNISAAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"648.38953"	"1295.77178"	"1295.77236"	"-0.45"	"-0.00029"	"7/72"	"7"	"72"	"10868019.4667969"	"HCD"	"MS2"	"45.76987"	"727.2"	"84.111"	"36.9406"	"9565"	"9565"	"9542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"976.8"	""	"890.2"	""	"874.4"	""	"1321.3"	""	"1430.0"	"1407.8"	""	"441"	"46"	"33.000"	"26.000"	"0.000566772270100534"	""	"0.0001889"	"0.0009555"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSNISAAK"	"[R].fSNISAAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"648.38989"	"1295.77251"	"1295.77236"	"0.12"	"0.00008"	"7/72"	"7"	"72"	"9109965.83514404"	"HCD"	"MS2"	"33.75864"	"612.9"	"84.100"	"36.8588"	"9488"	"9488"	"9466"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"796.0"	""	"735.7"	""	"752.0"	""	"1107.5"	""	"1219.7"	"1204.9"	""	"440"	"46"	"33.000"	"26.000"	"0.000578658958216984"	""	"0.0001889"	"0.0008948"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QASHVAPK"	"[K].qASHVAPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"432.59882"	"1295.78189"	"1295.78359"	"-1.31"	"-0.00057"	"7/70"	"7"	"70"	"1946794.27099609"	"HCD"	"MS2"	"27.15589"	"114.8"	"100.000"	"21.5704"	"3343"	"3343"	"3322"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.9"	""	"141.9"	""	"144.1"	""	"196.4"	""	"220.6"	"214.1"	""	"365"	"21"	"32.000"	"25.000"	"0.130696172363855"	"17"	"0.0003146"	"0.00147"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QASHVAPK"	"[K].qASHVAPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"432.59882"	"1295.78189"	"1295.78359"	"-1.31"	"-0.00057"	"8/70"	"8"	"70"	"2374410.4229126"	"HCD"	"MS2"	"30.93686"	"132.7"	"100.000"	"21.5883"	"3383"	"3383"	"3361"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.7"	""	"180.5"	""	"172.6"	""	"232.7"	""	"241.2"	"243.8"	""	"365"	"26"	"32.000"	"25.000"	"0.0474529120277662"	"17"	"0.0001889"	"0.0007188"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHITPEK"	"[K].lHITPEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"432.60703"	"1295.80652"	"1295.80874"	"-1.71"	"-0.00074"	"6/52"	"6"	"52"	"9397458.24743652"	"HCD"	"MS2"	"63.76501"	"424.8"	"100.000"	"31.7481"	"7405"	"7405"	"7382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"468.5"	""	"561.6"	""	"590.4"	""	"655.8"	""	"907.0"	"852.2"	""	"204"	"9"	"30.000"	"23.000"	"1.314014542727"	"18"	"0.00274"	"0.04403"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHITPEK"	"[K].lHITPEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"432.60727"	"1295.80725"	"1295.80874"	"-1.15"	"-0.00050"	"6/52"	"6"	"52"	"7125073.34387207"	"HCD"	"MS2"	"58.86591"	"219.1"	"55.944"	"31.9311"	"7522"	"7522"	"7498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.9"	""	"295.0"	""	"333.6"	""	"322.5"	""	"434.6"	"410.2"	""	"202"	"9"	"30.000"	"23.000"	"1.22834786065283"	"13"	"0.001879"	"0.02678"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QALAHGLK"	"[K].qALAHGLk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"432.60986"	"1295.81504"	"1295.81998"	"-3.81"	"-0.00165"	"4/72"	"4"	"72"	"35202488.4144287"	"HCD"	"MS2"	"54.69768"	"717.7"	"32.776"	"28.6284"	"6197"	"6197"	"6194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1062.1"	""	"985.5"	""	"1040.6"	""	"1220.6"	"3.1"	"1264.5"	"1216.5"	""	"157"	"12"	"28.000"	"21.000"	"0.502191845853879"	"13"	"0.000523"	"0.002992"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGVKPPR"	"[K].aIGVkPPR.[G]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"432.62268"	"1295.85349"	"1295.85636"	"-2.22"	"-0.00096"	"9/64"	"9"	"64"	"40130609.4532471"	"HCD"	"MS2"	"15.96559"	"843.3"	"27.957"	"28.4546"	"6099"	"6099"	"6094"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1161.6"	""	"1160.6"	""	"1193.5"	""	"1439.7"	"8.1"	"1496.4"	"1526.9"	""	"51"	"7"	"24.000"	"17.000"	"0.561746248078631"	"13"	"0.0008731"	"0.008497"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGVKPPR"	"[K].aIGVkPPR.[G]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"432.62305"	"1295.85459"	"1295.85636"	"-1.37"	"-0.00059"	"5/64"	"5"	"64"	"29219183.2834473"	"HCD"	"MS2"	"16.96299"	"789.7"	"34.903"	"28.5178"	"6162"	"6162"	"6146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1062.7"	""	"1100.1"	""	"1165.0"	""	"1301.3"	"1.3"	"1490.4"	"1360.3"	""	"51"	"1"	"24.000"	"17.000"	"1.98856678183431"	"13"	"0.004039"	"0.1041"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGVKPPR"	"[K].aIGVkPPR.[G]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.43097"	"1295.85466"	"1295.85636"	"-1.31"	"-0.00085"	"6/64"	"6"	"64"	"3328465.64361572"	"HCD"	"MS2"	"0"	"204.8"	"100.000"	"28.4844"	"6110"	"6110"	"6105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"291.3"	""	"286.6"	""	"290.1"	""	"333.5"	"1.9"	"360.7"	"375.2"	""	"51"	"12"	"24.000"	"17.000"	"0.146399697862869"	"13"	"0.00423"	"0.1089"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWMVGTK"	"[K].tWmVGTk.[L]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"648.87207"	"1296.73686"	"1296.73862"	"-1.35"	"-0.00088"	"6/58"	"6"	"58"	"11348492.8392944"	"HCD"	"MS2"	"0"	"726.8"	"100.000"	"36.5190"	"9349"	"9349"	"9322"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"897.1"	""	"1098.4"	""	"1104.4"	""	"1738.9"	"13.5"	"1111.6"	"902.0"	""	"535"	"24"	"34.000"	"27.000"	"0.110490206782368"	"17"	"0.001966"	"0.02807"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWMVGTK"	"[K].tWmVGTk.[L]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"648.87244"	"1296.73760"	"1296.73862"	"-0.79"	"-0.00051"	"6/58"	"6"	"58"	"17921046.2478027"	"HCD"	"MS2"	"7.322601"	"841.1"	"69.557"	"36.6633"	"9451"	"9451"	"9431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1038.8"	""	"1238.8"	""	"1293.2"	""	"1918.3"	"38.8"	"1340.7"	"1081.2"	""	"541"	"25"	"34.000"	"27.000"	"0.092932424906916"	"19"	"0.00162"	"0.02195"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTESLFK"	"[K].nTESLFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"648.88159"	"1296.75591"	"1296.75637"	"-0.36"	"-0.00023"	"12/64"	"12"	"64"	"14228756.2578735"	"HCD"	"MS2"	"0"	"1097.2"	"100.000"	"38.3457"	"10142"	"10142"	"10113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"998.5"	""	"923.6"	""	"820.0"	""	"3167.5"	"10.5"	"2060.5"	"2448.8"	""	"417"	"37"	"33.000"	"26.000"	"0.00465699808460166"	""	"0.001007"	"0.011"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTESLFK"	"[K].nTESLFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"648.88171"	"1296.75615"	"1296.75637"	"-0.17"	"-0.00011"	"12/64"	"12"	"64"	"14875811.2821655"	"HCD"	"MS2"	"0"	"1237.5"	"100.000"	"38.2710"	"10068"	"10068"	"10039"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1121.9"	""	"1067.9"	""	"913.7"	""	"3599.0"	"6.2"	"2310.5"	"2742.2"	""	"415"	"37"	"33.000"	"26.000"	"0.0045921715224317"	""	"0.0006037"	"0.00593"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFMVK"	"[R].nISFMVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"648.89063"	"1296.77397"	"1296.77500"	"-0.79"	"-0.00051"	"12/60"	"12"	"60"	"3351493.51300049"	"HCD"	"MS2"	"25.33748"	"308.6"	"100.000"	"47.9333"	"14002"	"14002"	"13976"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.6"	""	"466.3"	""	"420.8"	""	"417.7"	"0.6"	"611.9"	"631.0"	""	"376"	"34"	"32.000"	"25.000"	"0.00698486230702685"	""	"0.0004166"	"0.002433"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFMVK"	"[R].nISFMVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"648.89081"	"1296.77434"	"1296.77500"	"-0.51"	"-0.00033"	"12/60"	"12"	"60"	"1734581.43457031"	"HCD"	"MS2"	"0"	"174.7"	"100.000"	"48.3114"	"14204"	"14204"	"14186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.0"	""	"263.7"	""	"243.5"	""	"232.3"	"2.5"	"359.8"	"343.3"	""	"375"	"33"	"32.000"	"25.000"	"0.0100230817386932"	"25"	"0.0001889"	"0.001098"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFSSSGLK"	"[K].lFSSSGLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"648.89886"	"1296.79045"	"1296.79276"	"-1.78"	"-0.00115"	"7/60"	"7"	"60"	"3519730.52368164"	"HCD"	"MS2"	"22.45894"	"286.1"	"100.000"	"44.6303"	"12655"	"12655"	"12630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"282.9"	""	"298.1"	""	"340.6"	""	"551.7"	""	"666.0"	"586.5"	""	"321"	"24"	"32.000"	"25.000"	"0.0707090555928019"	"17"	"0.0003839"	"0.001605"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFSSSGLK"	"[K].lFSSSGLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"648.89948"	"1296.79167"	"1296.79276"	"-0.84"	"-0.00054"	"7/60"	"7"	"60"	"3639213.91217041"	"HCD"	"MS2"	"23.12749"	"284.0"	"100.000"	"44.9217"	"12823"	"12823"	"12799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.6"	""	"284.9"	""	"329.1"	""	"558.8"	""	"670.5"	"574.3"	""	"320"	"22"	"32.000"	"25.000"	"0.108923097390998"	"19"	"0.0003571"	"0.001532"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGTAHLK"	"[K].lVGTAHLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5FVK6"	"Coiled-coil and C2 domain-containing protein 1B OS=Rattus norvegicus OX=10116 GN=Cc2d1b PE=1 SV=2"	"Q5FVK6"	"Coiled-coil and C2 domain-containing protein 1B OS=Rattus norvegicus OX=10116 GN=Cc2d1b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"432.95087"	"1296.83805"	"1296.84038"	"-1.80"	"-0.00078"	"7/56"	"7"	"56"	"5176671.13317871"	"HCD"	"MS2"	"48.47989"	"303.1"	"100.000"	"32.6505"	"7774"	"7774"	"7752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"399.2"	""	"400.4"	""	"421.8"	""	"515.3"	""	"567.6"	"569.5"	""	"149"	"18"	"28.000"	"21.000"	"0.123924242452578"	"14"	"0.000523"	"0.003271"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGTAHLK"	"[K].lVGTAHLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5FVK6"	"Coiled-coil and C2 domain-containing protein 1B OS=Rattus norvegicus OX=10116 GN=Cc2d1b PE=1 SV=2"	"Q5FVK6"	"Coiled-coil and C2 domain-containing protein 1B OS=Rattus norvegicus OX=10116 GN=Cc2d1b PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"432.95123"	"1296.83915"	"1296.84038"	"-0.95"	"-0.00041"	"7/56"	"7"	"56"	"5455887.89770508"	"HCD"	"MS2"	"21.39557"	"312.0"	"100.000"	"32.7185"	"7845"	"7845"	"7814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"420.3"	""	"419.1"	""	"438.3"	""	"513.8"	"2.0"	"594.9"	"568.8"	""	"147"	"19"	"28.000"	"21.000"	"0.0955624639854468"	"17"	"0.0009404"	"0.009762"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSMVIDK"	"[R].fSMVIDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"649.38251"	"1297.75774"	"1297.75902"	"-0.98"	"-0.00064"	"12/56"	"12"	"56"	"6249975.41882324"	"HCD"	"MS2"	"0"	"540.4"	"100.000"	"50.3595"	"14985"	"14985"	"14970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"823.3"	""	"687.0"	""	"765.8"	""	"816.6"	""	"977.1"	"1057.4"	""	"403"	"36"	"33.000"	"26.000"	"0.00539852417451035"	"20"	"0.000523"	"0.002799"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSMVIDK"	"[R].fSMVIDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"649.38257"	"1297.75786"	"1297.75902"	"-0.89"	"-0.00058"	"12/56"	"12"	"56"	"4627206.71942139"	"HCD"	"MS2"	"0"	"420.9"	"100.000"	"50.2713"	"15000"	"15000"	"14986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"669.7"	""	"575.5"	""	"589.9"	""	"646.6"	"2.0"	"735.5"	"764.5"	""	"414"	"37"	"33.000"	"26.000"	"0.0038723120305572"	"21"	"0.0004166"	"0.00217"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSMVIDK"	"[R].fSMVIDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"649.38263"	"1297.75798"	"1297.75902"	"-0.80"	"-0.00052"	"12/56"	"12"	"56"	"6548306.84204102"	"HCD"	"MS2"	"0"	"580.1"	"100.000"	"50.0822"	"14874"	"14874"	"14857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"882.4"	""	"768.3"	""	"831.0"	""	"908.4"	""	"1009.8"	"1095.5"	""	"414"	"38"	"33.000"	"26.000"	"0.00361385185654544"	"22"	"0.000523"	"0.002947"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSMVIDK"	"[R].fSMVIDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"649.38269"	"1297.75810"	"1297.75902"	"-0.70"	"-0.00046"	"12/56"	"12"	"56"	"6655497.26586914"	"HCD"	"MS2"	"0"	"548.7"	"100.000"	"50.5736"	"15122"	"15122"	"15105"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"801.1"	""	"701.3"	""	"822.9"	""	"796.5"	""	"982.0"	"1099.1"	""	"412"	"37"	"33.000"	"26.000"	"0.00372277869958251"	"21"	"0.0006037"	"0.00537"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTMELAK"	"[R].fTMELAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"649.38275"	"1297.75823"	"1297.75902"	"-0.61"	"-0.00039"	"10/52"	"10"	"52"	"6261944.1953125"	"HCD"	"MS2"	"0"	"500.6"	"100.000"	"49.1594"	"14551"	"14551"	"14527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"680.2"	""	"669.6"	""	"674.8"	""	"869.3"	"0.5"	"906.0"	"942.6"	""	"411"	"26"	"33.000"	"26.000"	"0.0534332790230463"	"16"	"0.0006037"	"0.006189"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTMELAK"	"[R].fTMELAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"649.38293"	"1297.75859"	"1297.75902"	"-0.33"	"-0.00021"	"6/52"	"6"	"52"	"6742428.07629395"	"HCD"	"MS2"	"0"	"551.9"	"100.000"	"48.8888"	"14393"	"14393"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"752.1"	""	"763.0"	""	"718.5"	""	"930.3"	"0.2"	"995.3"	"1071.1"	""	"411"	"33"	"33.000"	"26.000"	"0.00997267867833158"	"18"	"0.0007076"	"0.006972"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTMELAK"	"[R].fTMELAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"649.38354"	"1297.75981"	"1297.75902"	"0.61"	"0.00040"	"5/52"	"5"	"52"	"9837660.54394531"	"HCD"	"MS2"	"5.167105"	"609.0"	"77.062"	"49.1833"	"14513"	"14513"	"14495"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"729.5"	""	"763.4"	""	"800.2"	""	"1166.0"	""	"1083.5"	"1246.1"	""	"392"	"14"	"32.000"	"25.000"	"0.80215089307082"	"19"	"0.001217"	"0.01666"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTMELAK"	"[R].fTMELAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"649.38367"	"1297.76006"	"1297.75902"	"0.80"	"0.00052"	"6/52"	"6"	"52"	"9428572.34112549"	"HCD"	"MS2"	"7.013734"	"524.9"	"70.986"	"49.4704"	"14674"	"14674"	"14654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"641.7"	""	"649.4"	""	"715.1"	""	"969.7"	""	"967.5"	"1038.7"	""	"392"	"15"	"32.000"	"25.000"	"0.643066774501713"	"18"	"0.001846"	"0.0259"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"649.39117"	"1297.77507"	"1297.77677"	"-1.31"	"-0.00085"	"6/54"	"6"	"54"	"29207137.7822266"	"HCD"	"MS2"	"34.3024"	"757.2"	"35.592"	"36.7343"	"9480"	"9480"	"9462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1023.7"	""	"1046.8"	""	"1110.0"	""	"1393.3"	""	"1370.7"	"1232.6"	""	"338"	"19"	"32.000"	"25.000"	"0.192702214097837"	"23"	"0.004007"	"0.1035"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLPTLASLR"	"[K].vVLPTLASLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"649.42303"	"1297.83879"	"1297.84049"	"-1.31"	"-0.00085"	"7/78"	"7"	"78"	"5047948.65155029"	"HCD"	"MS2"	"33.22583"	"167.9"	"100.000"	"61.6460"	"19625"	"19625"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"239.9"	""	"237.0"	""	"241.9"	""	"251.9"	""	"291.8"	"330.3"	""	"154"	"30"	"28.000"	"21.000"	"0.00710379998909167"	"16"	"0.0004557"	"0.002621"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLPTLASLR"	"[K].vVLPTLASLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"649.42407"	"1297.84087"	"1297.84049"	"0.29"	"0.00019"	"7/78"	"7"	"78"	"5109595.79571533"	"HCD"	"MS2"	"29.0878"	"177.0"	"100.000"	"61.5129"	"19517"	"19517"	"19497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.4"	""	"247.0"	""	"261.0"	""	"250.1"	"1.1"	"324.4"	"333.7"	""	"154"	"29"	"28.000"	"21.000"	"0.010220937324519"	"16"	"0.0001308"	"0.0002839"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIPILK"	"[R].qQIPILk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"649.43353"	"1297.85979"	"1297.86078"	"-0.76"	"-0.00049"	"6/62"	"6"	"62"	"5823330.49047852"	"HCD"	"MS2"	"30.24754"	"429.0"	"100.000"	"42.5306"	"11852"	"11852"	"11827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"636.8"	""	"593.2"	""	"576.3"	""	"676.4"	"2.4"	"843.3"	"736.3"	""	"107"	"24"	"27.000"	"20.000"	"0.0236784779214005"	"19"	"0.001217"	"0.01641"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIPILK"	"[R].qQIPILk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"649.43372"	"1297.86016"	"1297.86078"	"-0.48"	"-0.00031"	"6/62"	"6"	"62"	"5399585.95349121"	"HCD"	"MS2"	"31.79397"	"411.4"	"100.000"	"42.3110"	"11718"	"11718"	"11692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"588.3"	""	"548.1"	""	"574.2"	""	"639.0"	""	"811.0"	"741.0"	""	"106"	"23"	"27.000"	"20.000"	"0.0265018303537798"	"19"	"0.001686"	"0.02312"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTVATVFR"	"[R].yLTVATVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QRB4"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1"	"Q4QRB4"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"649.88702"	"1298.76677"	"1298.76699"	"-0.17"	"-0.00011"	"7/70"	"7"	"70"	"3293417.86535645"	"HCD"	"MS2"	"13.9733"	"177.5"	"100.000"	"56.8919"	"17688"	"17688"	"17669"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.6"	""	"270.8"	""	"285.0"	""	"249.1"	""	"331.4"	"300.8"	""	"502"	"44"	"33.000"	"27.000"	"0.00101782642397544"	"18"	"0.0001308"	"0.0002763"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTVATVFR"	"[R].yLTVATVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QRB4"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1"	"Q4QRB4"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"649.88721"	"1298.76714"	"1298.76699"	"0.11"	"0.00007"	"7/70"	"7"	"70"	"2773266.99536133"	"HCD"	"MS2"	"9.747503"	"159.9"	"100.000"	"56.6708"	"17544"	"17544"	"17515"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"208.1"	""	"243.3"	""	"267.9"	""	"228.9"	""	"291.7"	"276.8"	""	"508"	"42"	"34.000"	"27.000"	"0.00160263165497969"	"17"	"0"	"0.0001646"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPEELLLR"	"[K].lSPEELLLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"649.89758"	"1298.78789"	"1298.78812"	"-0.18"	"-0.00011"	"11/70"	"11"	"70"	"7617292.86517334"	"HCD"	"MS2"	"31.88818"	"288.5"	"100.000"	"59.3099"	"18618"	"18618"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"417.3"	""	"405.7"	""	"404.8"	""	"469.8"	"4.2"	"525.6"	"504.3"	""	"409"	"36"	"33.000"	"26.000"	"0.00504305044464423"	"23"	"0.0006037"	"0.004082"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPEELLLR"	"[K].lSPEELLLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"649.89825"	"1298.78923"	"1298.78812"	"0.86"	"0.00056"	"11/70"	"11"	"70"	"6530143.02130127"	"HCD"	"MS2"	"32.35336"	"259.4"	"100.000"	"59.4891"	"18744"	"18744"	"18725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.7"	""	"361.9"	""	"365.4"	""	"396.3"	"1.9"	"459.3"	"482.5"	""	"377"	"35"	"32.000"	"25.000"	"0.00641669437586387"	"19"	"0.0006037"	"0.005209"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLLRPK"	"[K].dVLLRPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z244"	"GMP reductase 1 OS=Rattus norvegicus OX=10116 GN=Gmpr PE=2 SV=1"	"Q9Z244"	"GMP reductase 1 OS=Rattus norvegicus OX=10116 GN=Gmpr PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"433.62259"	"1298.85321"	"1298.85603"	"-2.17"	"-0.00094"	"6/52"	"6"	"52"	"14100270.9779663"	"HCD"	"MS2"	"0"	"717.8"	"75.661"	"33.2373"	"8013"	"8013"	"8001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1004.1"	""	"1008.1"	""	"1086.2"	""	"1212.9"	""	"1209.6"	"1274.3"	""	"119"	"12"	"27.000"	"20.000"	"0.394018819702548"	"13"	"0.0008453"	"0.007925"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLLRPK"	"[K].dVLLRPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z244"	"GMP reductase 1 OS=Rattus norvegicus OX=10116 GN=Gmpr PE=2 SV=1"	"Q9Z244"	"GMP reductase 1 OS=Rattus norvegicus OX=10116 GN=Gmpr PE=2 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"433.62265"	"1298.85340"	"1298.85603"	"-2.03"	"-0.00088"	"7/52"	"7"	"52"	"14371041.4763184"	"HCD"	"MS2"	"30.76205"	"580.7"	"64.042"	"33.3097"	"8084"	"8084"	"8071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"843.0"	""	"838.3"	""	"869.1"	""	"974.5"	""	"950.8"	"1018.4"	""	"119"	"17"	"27.000"	"20.000"	"0.119266085628227"	"16"	"0.0006037"	"0.005201"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPVVLAK"	"[K].lTPVVLAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"649.94373"	"1298.88017"	"1298.88118"	"-0.77"	"-0.00050"	"12/56"	"12"	"56"	"11993392.7067871"	"HCD"	"MS2"	"11.96597"	"537.6"	"71.561"	"48.5922"	"14272"	"14272"	"14255"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"694.0"	""	"684.7"	""	"696.6"	""	"985.2"	"2.7"	"989.2"	"1043.9"	""	"55"	"36"	"24.000"	"17.000"	"0.000690768768665134"	"16"	"0.0006037"	"0.004363"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPVVLAK"	"[K].lTPVVLAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"649.94409"	"1298.88091"	"1298.88118"	"-0.21"	"-0.00014"	"12/56"	"12"	"56"	"10535118.3763428"	"HCD"	"MS2"	"9.485385"	"609.0"	"100.000"	"48.8738"	"14434"	"14434"	"14415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"808.6"	""	"793.7"	""	"769.8"	""	"1107.6"	"2.5"	"1146.6"	"1144.6"	""	"53"	"36"	"24.000"	"17.000"	"0.000650497862656533"	"16"	"0.000523"	"0.003036"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEYAFK"	"[R].iAEYAFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41565"	"Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3g PE=1 SV=2"	"P41565"	"Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3g PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"650.38873"	"1299.77019"	"1299.77130"	"-0.85"	"-0.00055"	"6/48"	"6"	"48"	"3881597.05767822"	"HCD"	"MS2"	"0"	"327.9"	"100.000"	"45.7669"	"13166"	"13166"	"13154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"544.3"	""	"475.6"	""	"482.8"	""	"476.5"	""	"569.0"	"555.2"	""	"483"	"29"	"33.000"	"26.000"	"0.0333362799901596"	"19"	"0.0006037"	"0.00471"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEYAFK"	"[R].iAEYAFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41565"	"Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3g PE=1 SV=2"	"P41565"	"Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3g PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"650.38904"	"1299.77080"	"1299.77130"	"-0.38"	"-0.00025"	"6/48"	"6"	"48"	"4713483.37268066"	"HCD"	"MS2"	"0"	"409.9"	"100.000"	"45.6539"	"13069"	"13069"	"13047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"635.9"	""	"613.5"	""	"629.2"	""	"595.5"	"1.3"	"701.3"	"701.1"	""	"475"	"28"	"33.000"	"26.000"	"0.0364471533414833"	"24"	"0.0006037"	"0.004781"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFELTFK"	"[R].gFELTFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"650.38934"	"1299.77141"	"1299.77130"	"0.09"	"0.00006"	"12/52"	"12"	"52"	"4528768.49273682"	"HCD"	"MS2"	"10.18175"	"398.9"	"100.000"	"55.3621"	"17009"	"17009"	"16987"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"491.3"	""	"500.1"	""	"473.4"	""	"734.9"	""	"779.9"	"806.5"	""	"473"	"32"	"33.000"	"26.000"	"0.0133300305602838"	"19"	"0.0006037"	"0.003787"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFELTFK"	"[R].gFELTFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"650.38983"	"1299.77239"	"1299.77130"	"0.84"	"0.00055"	"12/52"	"12"	"52"	"5119926.55609131"	"HCD"	"MS2"	"9.172155"	"446.3"	"100.000"	"55.5703"	"17148"	"17148"	"17125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"541.6"	""	"539.9"	""	"558.2"	""	"814.7"	""	"879.3"	"901.8"	""	"469"	"36"	"33.000"	"26.000"	"0.00584982463468122"	"21"	"0.0005564"	"0.003355"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSMIK"	"[K].sLYSMIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"650.39056"	"1299.77385"	"1299.77467"	"-0.63"	"-0.00041"	"6/54"	"6"	"54"	"13134139.4344482"	"HCD"	"MS2"	"0"	"1087.7"	"100.000"	"48.2085"	"14114"	"14114"	"14096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1815.1"	""	"1806.6"	""	"1833.0"	""	"960.8"	""	"1857.5"	"2019.2"	""	"448"	"34"	"33.000"	"26.000"	"0.00811424316453405"	"18"	"0.0007793"	"0.007293"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSMIK"	"[K].sLYSMIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"650.39075"	"1299.77422"	"1299.77467"	"-0.34"	"-0.00022"	"6/54"	"6"	"54"	"14849841.6060791"	"HCD"	"MS2"	"0"	"946.5"	"82.534"	"48.4810"	"14273"	"14273"	"14255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1573.1"	""	"1619.6"	""	"1621.0"	""	"834.3"	""	"1542.3"	"1766.6"	""	"448"	"34"	"33.000"	"26.000"	"0.00798450538874787"	"18"	"0.0006737"	"0.006403"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSMIK"	"[K].sLYSMIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"650.39081"	"1299.77434"	"1299.77467"	"-0.25"	"-0.00016"	"6/54"	"6"	"54"	"12607850.5441284"	"HCD"	"MS2"	"20.2326"	"738.5"	"83.665"	"48.7934"	"14401"	"14401"	"14383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1086.4"	""	"1090.9"	""	"1124.9"	""	"968.1"	""	"1339.9"	"1400.4"	""	"445"	"16"	"33.000"	"26.000"	"0.560183116426345"	"15"	"0.001454"	"0.02008"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSMIK"	"[K].sLYSMIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"650.39136"	"1299.77544"	"1299.77467"	"0.59"	"0.00039"	"6/54"	"6"	"54"	"11937394.7032471"	"HCD"	"MS2"	"21.0214"	"841.1"	"100.000"	"48.5209"	"14242"	"14242"	"14224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1228.7"	""	"1210.3"	""	"1263.8"	""	"1120.9"	""	"1553.1"	"1602.9"	""	"438"	"15"	"33.000"	"26.000"	"0.697339257258021"	"15"	"0.001718"	"0.02362"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPHLSPK"	"[R].yPHLSPk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M883"	"Chloride intracellular channel protein 2 OS=Rattus norvegicus OX=10116 GN=Clic2 PE=2 SV=1"	"Q5M883"	"Chloride intracellular channel protein 2 OS=Rattus norvegicus OX=10116 GN=Clic2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"433.93140"	"1299.77964"	"1299.78253"	"-2.23"	"-0.00096"	"6/48"	"6"	"48"	"5014650.74645996"	"HCD"	"MS2"	"67.10928"	"245.4"	"100.000"	"31.1809"	"7173"	"7173"	"7142"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"330.7"	""	"366.2"	""	"382.0"	""	"390.1"	"6.8"	"410.5"	"436.5"	""	"414"	"11"	"33.000"	"26.000"	"1.50650419539122"	"13"	"0.0008731"	"0.009218"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAGGVGSIVR"	"[K].aLAAGGVGSIVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"650.40082"	"1299.79436"	"1299.79460"	"-0.19"	"-0.00012"	"9/88"	"9"	"88"	"1972012.69232178"	"HCD"	"MS2"	"8.856792"	"163.0"	"100.000"	"39.4350"	"10546"	"10546"	"10518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.2"	""	"202.4"	""	"216.9"	""	"298.4"	"3.6"	"322.4"	"297.9"	""	"489"	"44"	"33.000"	"26.000"	"0.00105021656344015"	""	"0"	"6.106E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSAYIK"	"[R].iFSAYIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"650.40631"	"1299.80535"	"1299.80768"	"-1.80"	"-0.00117"	"6/48"	"6"	"48"	"4006028.44592285"	"HCD"	"MS2"	"33.34277"	"300.0"	"100.000"	"53.6744"	"16323"	"16323"	"16307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"483.6"	""	"464.3"	""	"445.4"	""	"470.1"	""	"474.3"	"500.4"	""	"444"	"32"	"33.000"	"26.000"	"0.0152880809788429"	"17"	"0.000523"	"0.002776"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSAYIK"	"[R].iFSAYIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"650.40662"	"1299.80596"	"1299.80768"	"-1.33"	"-0.00086"	"6/48"	"6"	"48"	"3793534.22271729"	"HCD"	"MS2"	"33.89547"	"291.6"	"100.000"	"53.8579"	"16450"	"16450"	"16439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"490.4"	""	"461.2"	""	"422.4"	""	"470.3"	""	"454.5"	"456.9"	""	"444"	"31"	"33.000"	"26.000"	"0.0159717673116821"	"17"	"0.0004166"	"0.002399"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSAYIK"	"[R].iFSAYIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"650.40668"	"1299.80608"	"1299.80768"	"-1.23"	"-0.00080"	"12/48"	"12"	"48"	"6757863.40557861"	"HCD"	"MS2"	"13.76711"	"505.9"	"100.000"	"53.9629"	"16437"	"16437"	"16425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"859.7"	""	"758.7"	""	"773.9"	""	"781.0"	""	"771.6"	"837.6"	""	"444"	"35"	"33.000"	"26.000"	"0.00634385100629239"	"21"	"0.000523"	"0.002957"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSAYIK"	"[R].iFSAYIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"650.40668"	"1299.80608"	"1299.80768"	"-1.23"	"-0.00080"	"12/48"	"12"	"48"	"7250997.6854248"	"HCD"	"MS2"	"6.620759"	"534.7"	"100.000"	"54.1440"	"16564"	"16564"	"16555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"910.6"	""	"848.7"	""	"821.2"	""	"780.1"	"0.1"	"828.5"	"862.4"	""	"444"	"35"	"33.000"	"26.000"	"0.00627123354431287"	"21"	"0.000523"	"0.003134"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSAYIK"	"[R].iFSAYIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"650.40698"	"1299.80669"	"1299.80768"	"-0.76"	"-0.00050"	"6/48"	"6"	"48"	"2053123.11242676"	"HCD"	"MS2"	"27.02938"	"164.7"	"100.000"	"54.2589"	"16558"	"16558"	"16541"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.2"	""	"247.7"	""	"240.7"	""	"259.4"	""	"261.6"	"281.5"	""	"435"	"29"	"33.000"	"26.000"	"0.0286720840636019"	"18"	"0.0003839"	"0.001724"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTFAYK"	"[K].vLTFAYk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"650.40741"	"1299.80754"	"1299.80768"	"-0.11"	"-0.00007"	"10/48"	"10"	"48"	"3757805.74108887"	"HCD"	"MS2"	"47.76227"	"238.8"	"100.000"	"51.9945"	"15653"	"15653"	"15634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"339.8"	""	"346.8"	""	"360.1"	""	"371.5"	""	"412.2"	"434.9"	""	"435"	"24"	"33.000"	"26.000"	"0.0896312104036693"	"18"	"0.0006037"	"0.00438"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTFAYK"	"[K].vLTFAYk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"650.40747"	"1299.80766"	"1299.80768"	"-0.01"	"-0.00001"	"6/48"	"6"	"48"	"3978469.49749756"	"HCD"	"MS2"	"43.07821"	"228.5"	"100.000"	"52.1974"	"15786"	"15786"	"15766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.5"	""	"317.5"	""	"370.2"	""	"360.8"	""	"399.5"	"388.8"	""	"435"	"28"	"33.000"	"26.000"	"0.0309356511199213"	"19"	"0.0006037"	"0.004238"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSAYIK"	"[R].iFSAYIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"650.40759"	"1299.80791"	"1299.80768"	"0.18"	"0.00011"	"6/48"	"6"	"48"	"2388315.13543701"	"HCD"	"MS2"	"0"	"188.1"	"100.000"	"54.4377"	"16684"	"16684"	"16667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.0"	""	"272.1"	""	"277.8"	""	"296.6"	""	"285.3"	"353.6"	""	"435"	"30"	"33.000"	"26.000"	"0.0203919736506379"	"18"	"0.0003146"	"0.001398"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNTVLGK"	"[K].lPNTVLGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"650.42249"	"1299.83769"	"1299.84004"	"-1.81"	"-0.00117"	"6/66"	"6"	"66"	"7404346.9866333"	"HCD"	"MS2"	"0"	"445.1"	"100.000"	"43.4406"	"12220"	"12220"	"12202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"649.3"	""	"545.3"	""	"612.7"	""	"754.1"	""	"824.8"	"836.5"	""	"264"	"45"	"31.000"	"24.000"	"0.000467276490230134"	""	"0.0004166"	"0.002275"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNTVLGK"	"[K].lPNTVLGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"650.42285"	"1299.83843"	"1299.84004"	"-1.24"	"-0.00081"	"6/66"	"6"	"66"	"5669952.04162598"	"HCD"	"MS2"	"0"	"365.5"	"100.000"	"43.1743"	"12063"	"12063"	"12047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"553.6"	""	"468.3"	""	"508.0"	""	"606.7"	"1.2"	"671.5"	"652.6"	""	"264"	"44"	"31.000"	"24.000"	"0.000510004409711371"	""	"0.0001889"	"0.0008582"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNTVLGK"	"[K].lPNTVLGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"650.42505"	"1299.84282"	"1299.84004"	"2.14"	"0.00139"	"7/66"	"7"	"66"	"6868323.21893311"	"HCD"	"MS2"	"0"	"362.8"	"80.890"	"43.7660"	"12352"	"12352"	"12332"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"433.3"	""	"417.9"	""	"444.2"	""	"646.7"	""	"744.2"	"759.5"	""	"240"	"26"	"30.000"	"23.000"	"0.029253729820425"	"22"	"0.0005564"	"0.00332"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPPVFGLCR"	"[R].hPPVFGLcR.[V]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"434.23294"	"1300.68427"	"1300.68558"	"-1.01"	"-0.00044"	"8/66"	"8"	"66"	"4538153.36700439"	"HCD"	"MS2"	"46.40537"	"106.6"	"100.000"	"40.9993"	"11228"	"11228"	"11197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.3"	""	"162.3"	""	"150.1"	""	"166.6"	""	"186.3"	"201.5"	""	"612"	"32"	"34.000"	"27.000"	"0.0210242942644355"	"15"	"0.0001308"	"0.0002309"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPPVFGLCR"	"[R].hPPVFGLcR.[V]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"434.23294"	"1300.68427"	"1300.68558"	"-1.01"	"-0.00044"	"8/66"	"8"	"66"	"5659548.76580811"	"HCD"	"MS2"	"0"	"122.3"	"100.000"	"40.8871"	"11138"	"11138"	"11109"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.5"	""	"197.7"	""	"177.2"	""	"182.9"	""	"209.3"	"230.0"	""	"612"	"37"	"34.000"	"27.000"	"0.00569798663818838"	"17"	"0.0001859"	"0.0003746"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDWVYGYR"	"[K].lDWVYGYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"650.84760"	"1300.68791"	"1300.68874"	"-0.63"	"-0.00041"	"6/56"	"6"	"56"	"7920785.33526611"	"HCD"	"MS2"	"24.16722"	"394.0"	"100.000"	"57.7537"	"18040"	"18040"	"18021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"515.7"	""	"487.1"	""	"548.1"	""	"615.0"	""	"788.8"	"787.5"	""	"637"	"28"	"35.000"	"28.000"	"0.0521326062074757"	"27"	"0.0004166"	"0.002209"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDWVYGYR"	"[K].lDWVYGYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"650.84802"	"1300.68877"	"1300.68874"	"0.02"	"0.00001"	"6/56"	"6"	"56"	"6858275.98309326"	"HCD"	"MS2"	"28.23344"	"375.1"	"100.000"	"57.5848"	"17917"	"17917"	"17899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"498.0"	""	"471.4"	""	"529.4"	""	"555.5"	""	"729.8"	"783.1"	""	"624"	"20"	"34.000"	"27.000"	"0.30210269115351"	"21"	"0.000494"	"0.002679"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIQAACK"	"[K].yIQAAck.[T]"	"N-Term(TMT6plex); C6(Methylthio); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"650.86139"	"1300.71550"	"1300.71577"	"-0.21"	"-0.00013"	"10/58"	"10"	"58"	"3851123.28564453"	"HCD"	"MS2"	"13.56311"	"359.4"	"100.000"	"40.1453"	"10834"	"10834"	"10805"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"482.0"	""	"474.8"	""	"471.8"	""	"620.3"	"2.6"	"698.7"	"657.3"	""	"622"	"23"	"34.000"	"27.000"	"0.150577606318655"	"17"	"0.000523"	"0.003062"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIQAACK"	"[K].yIQAAck.[T]"	"N-Term(TMT6plex); C6(Methylthio); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"650.86194"	"1300.71660"	"1300.71577"	"0.64"	"0.00041"	"10/58"	"10"	"58"	"3627067.75744629"	"HCD"	"MS2"	"0"	"316.4"	"100.000"	"40.2853"	"10935"	"10935"	"10909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"452.2"	""	"385.6"	""	"401.5"	""	"558.3"	"1.1"	"604.1"	"597.1"	""	"653"	"25"	"35.000"	"28.000"	"0.11139948564456"	"17"	"0.0004557"	"0.002629"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPWQVSLR"	"[RK].wPWQVSLR.[YVFT]"	"N-Term(TMT6plex)"	"1"	"4"	"Q05511"	"Serine protease hepsin OS=Rattus norvegicus OX=10116 GN=Hpn PE=2 SV=1"	"Q05511; P27435; P50343; P83748"	"Serine protease hepsin OS=Rattus norvegicus OX=10116 GN=Hpn PE=2 SV=1; Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2; Tryptase beta-2 OS=Rattus norvegicus OX=10116 GN=Tpsb2 PE=2 SV=1; Serine protease 30 OS=Rattus norvegicus OX=10116 GN=Prss30 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"650.87067"	"1300.73406"	"1300.73636"	"-1.77"	"-0.00115"	"5/64"	"5"	"64"	"3352108.74676514"	"HCD"	"MS2"	"41.6019"	"158.8"	"100.000"	"64.1122"	"20632"	"20632"	"20611"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"247.9"	""	"185.4"	""	"202.7"	""	"254.3"	"5.7"	"285.2"	"323.7"	""	"644"	"8"	"35.000"	"28.000"	"5.63450633737139"	"19"	"0.000494"	"0.002737"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPWQVSLR"	"[RK].wPWQVSLR.[YVFT]"	"N-Term(TMT6plex)"	"1"	"4"	"Q05511"	"Serine protease hepsin OS=Rattus norvegicus OX=10116 GN=Hpn PE=2 SV=1"	"Q05511; P27435; P50343; P83748"	"Serine protease hepsin OS=Rattus norvegicus OX=10116 GN=Hpn PE=2 SV=1; Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2; Tryptase beta-2 OS=Rattus norvegicus OX=10116 GN=Tpsb2 PE=2 SV=1; Serine protease 30 OS=Rattus norvegicus OX=10116 GN=Prss30 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"650.87183"	"1300.73638"	"1300.73636"	"0.01"	"0.00001"	"5/64"	"5"	"64"	"3504854.41259766"	"HCD"	"MS2"	"38.36399"	"169.4"	"100.000"	"64.1115"	"20579"	"20579"	"20553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"250.6"	""	"169.7"	""	"228.7"	""	"309.2"	"3.9"	"293.2"	"349.9"	""	"629"	"15"	"34.000"	"27.000"	"1.10820638942862"	"22"	"0.0003839"	"0.001695"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPWQVSLR"	"[RK].wPWQVSLR.[YVFT]"	"N-Term(TMT6plex)"	"1"	"4"	"Q05511"	"Serine protease hepsin OS=Rattus norvegicus OX=10116 GN=Hpn PE=2 SV=1"	"Q05511; P27435; P50343; P83748"	"Serine protease hepsin OS=Rattus norvegicus OX=10116 GN=Hpn PE=2 SV=1; Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2; Tryptase beta-2 OS=Rattus norvegicus OX=10116 GN=Tpsb2 PE=2 SV=1; Serine protease 30 OS=Rattus norvegicus OX=10116 GN=Prss30 PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"650.87195"	"1300.73662"	"1300.73636"	"0.20"	"0.00013"	"7/64"	"7"	"64"	"3416476.51477051"	"HCD"	"MS2"	"33.08347"	"128.0"	"100.000"	"64.4649"	"20776"	"20776"	"20755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.1"	""	"142.6"	""	"178.1"	""	"189.4"	""	"230.2"	"265.9"	""	"644"	"7"	"35.000"	"28.000"	"7.20868206619005"	"18"	"0.002265"	"0.03312"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VITIMQNPR"	"[R].vITIMQNPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"650.88330"	"1300.75932"	"1300.76086"	"-1.18"	"-0.00077"	"7/70"	"7"	"70"	"7996263.10870361"	"HCD"	"MS2"	"21.76735"	"376.2"	"100.000"	"40.5286"	"11035"	"11035"	"11005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"674.3"	""	"669.5"	""	"685.0"	""	"376.9"	"4.8"	"608.2"	"532.6"	""	"657"	"53"	"35.000"	"28.000"	"0.000182614548513328"	"20"	"0.0001308"	"0.0002526"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VITIMQNPR"	"[R].vITIMQNPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"650.88416"	"1300.76103"	"1300.76086"	"0.14"	"0.00009"	"7/70"	"7"	"70"	"9655172.02801514"	"HCD"	"MS2"	"0"	"440.5"	"100.000"	"40.4055"	"10940"	"10940"	"10917"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"817.4"	""	"755.5"	""	"783.9"	""	"454.0"	""	"699.3"	"649.3"	""	"642"	"53"	"35.000"	"28.000"	"0.000176402620508297"	"23"	"0.0001889"	"0.0004685"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVLSLSLLR"	"[R].gNVLSLSLLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"650.91022"	"1300.81316"	"1300.81500"	"-1.42"	"-0.00092"	"8/92"	"8"	"92"	"3404853.30480957"	"HCD"	"MS2"	"49.13275"	"147.4"	"100.000"	"58.9919"	"18542"	"18542"	"18517"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.9"	""	"191.0"	""	"214.4"	""	"243.4"	""	"253.7"	"284.6"	""	"493"	"42"	"33.000"	"26.000"	"0.00163612666854071"	""	"0"	"0.0001649"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVLSLSLLR"	"[R].gNVLSLSLLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"650.91132"	"1300.81536"	"1300.81500"	"0.27"	"0.00018"	"8/92"	"8"	"92"	"3834899.00701904"	"HCD"	"MS2"	"48.78149"	"165.9"	"100.000"	"58.8615"	"18436"	"18436"	"18409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.6"	""	"218.6"	""	"237.9"	""	"286.6"	"0.2"	"302.7"	"302.2"	""	"508"	"40"	"34.000"	"27.000"	"0.0023433314249731"	""	"0.0001308"	"0.000278"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIPDSIGK"	"[K].lIPDSIGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"650.91571"	"1300.82414"	"1300.82406"	"0.07"	"0.00004"	"5/58"	"5"	"58"	"16636817.1324463"	"HCD"	"MS2"	"4.081306"	"762.0"	"76.114"	"47.4419"	"13801"	"13801"	"13784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1034.9"	""	"1033.4"	""	"1089.7"	""	"1340.7"	"8.6"	"1407.5"	"1302.9"	""	"378"	"35"	"32.000"	"25.000"	"0.00597670477771823"	""	"0.0003571"	"0.001492"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIPDSIGK"	"[K].lIPDSIGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"650.91620"	"1300.82512"	"1300.82406"	"0.82"	"0.00053"	"5/58"	"5"	"58"	"18954695.2929077"	"HCD"	"MS2"	"2.120812"	"719.3"	"65.662"	"47.7399"	"13971"	"13971"	"13954"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"936.6"	""	"969.0"	""	"1053.5"	""	"1242.5"	"5.0"	"1399.2"	"1210.4"	""	"350"	"35"	"32.000"	"25.000"	"0.00539557891293637"	""	"0.0003839"	"0.001927"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAIIPMK"	"[R].gIAIIPMk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.0526"	"0.0000"	"1"	"1"	"1"	"650.92401"	"1300.84075"	"1300.84269"	"-1.49"	"-0.00097"	"6/58"	"6"	"58"	"4956987.64044189"	"HCD"	"MS2"	"18.70177"	"375.9"	"100.000"	"53.1066"	"16158"	"16158"	"16134"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"589.2"	""	"489.3"	""	"534.9"	""	"538.2"	"5.2"	"660.6"	"742.6"	""	"267"	"19"	"31.000"	"24.000"	"0.168453975867855"	""	"0.002925"	"0.05068"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAIIPMK"	"[R].gIAIIPMk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.0556"	"0.0000"	"1"	"1"	"1"	"650.92517"	"1300.84307"	"1300.84269"	"0.29"	"0.00019"	"6/58"	"6"	"58"	"4781718.28320313"	"HCD"	"MS2"	"21.35926"	"350.2"	"100.000"	"52.9219"	"16033"	"16033"	"16002"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"547.5"	""	"471.1"	""	"500.2"	""	"494.3"	""	"636.3"	"667.4"	""	"211"	"18"	"30.000"	"23.000"	"0.166437988953281"	""	"0.003286"	"0.0736"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVVPKPR"	"[K].fVVPkPR.[S]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"434.28799"	"1300.84943"	"1300.85055"	"-0.86"	"-0.00037"	"3/54"	"3"	"54"	"8227705.27313232"	"HCD"	"MS2"	"13.92519"	"512.4"	"100.000"	"35.7858"	"9091"	"9091"	"9065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"801.5"	""	"954.4"	""	"877.9"	""	"760.8"	""	"691.3"	"748.1"	""	"246"	"9"	"30.000"	"23.000"	"1.65922434558773"	"13"	"0.0006037"	"0.003858"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVVPKPR"	"[K].fVVPkPR.[S]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"434.28812"	"1300.84980"	"1300.85055"	"-0.58"	"-0.00025"	"3/54"	"3"	"54"	"6149986.16467285"	"HCD"	"MS2"	"13.81189"	"413.0"	"100.000"	"35.7103"	"9017"	"9017"	"8987"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"609.0"	""	"785.5"	""	"726.5"	""	"617.7"	""	"526.5"	"634.7"	""	"247"	"9"	"30.000"	"23.000"	"1.59833186419073"	"13"	"0.0006037"	"0.004686"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADYISK"	"[K].fADYISk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"651.37811"	"1301.74895"	"1301.75056"	"-1.24"	"-0.00081"	"6/54"	"6"	"54"	"7546834.95129395"	"HCD"	"MS2"	"0"	"621.7"	"100.000"	"46.1038"	"13301"	"13301"	"13284"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"928.4"	""	"868.7"	""	"890.8"	""	"917.3"	""	"1122.6"	"1165.4"	""	"884"	"33"	"36.000"	"29.000"	"0.0235191850595923"	"19"	"0.0005564"	"0.003552"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADYISK"	"[K].fADYISk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"651.37921"	"1301.75115"	"1301.75056"	"0.45"	"0.00029"	"12/54"	"12"	"54"	"7009690.62530518"	"HCD"	"MS2"	"0"	"598.5"	"100.000"	"45.8215"	"13137"	"13137"	"13118"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"856.4"	""	"828.2"	""	"849.3"	""	"928.9"	""	"1051.3"	"1157.1"	""	"873"	"34"	"36.000"	"29.000"	"0.0172180612355859"	"18"	"0.000494"	"0.002685"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLINILTER"	"[K].tLINILTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"651.40259"	"1301.79790"	"1301.79902"	"-0.86"	"-0.00056"	"7/88"	"7"	"88"	"41801284.9853516"	"HCD"	"MS2"	"0.3185582"	"283.6"	"17.098"	"59.9494"	"18933"	"18933"	"18916"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"367.1"	""	"400.5"	""	"411.6"	""	"432.8"	""	"515.2"	"564.3"	""	"586"	"45"	"34.000"	"27.000"	"0.000827689832650302"	""	"0.0001889"	"0.0008133"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAHFLEK"	"[R].vAHFLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"434.60416"	"1301.79792"	"1301.79818"	"-0.20"	"-0.00009"	"10/48"	"10"	"48"	"21564155.8574219"	"HCD"	"MS2"	"44.47562"	"383.0"	"41.957"	"36.7732"	"9496"	"9496"	"9478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"558.6"	""	"484.3"	""	"545.5"	""	"634.0"	"1.5"	"748.2"	"657.4"	""	"586"	"25"	"34.000"	"27.000"	"0.0999695231052251"	"25"	"0.0002277"	"0.001308"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLINILTER"	"[K].tLINILTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"651.40271"	"1301.79814"	"1301.79902"	"-0.67"	"-0.00044"	"7/88"	"7"	"88"	"30335569.7766113"	"HCD"	"MS2"	"0.5549968"	"241.5"	"20.379"	"59.8184"	"18826"	"18826"	"18809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.9"	""	"353.5"	""	"356.1"	""	"363.0"	""	"446.1"	"460.6"	""	"594"	"45"	"34.000"	"27.000"	"0.000858531925062546"	""	"0.0001889"	"0.00059"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLINILTER"	"[K].tLINILTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"651.40283"	"1301.79839"	"1301.79902"	"-0.48"	"-0.00031"	"7/88"	"7"	"88"	"9837883.1104126"	"HCD"	"MS2"	"0"	"433.9"	"100.000"	"59.6392"	"18806"	"18806"	"18789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"556.1"	""	"594.6"	""	"621.2"	""	"714.2"	""	"819.1"	"808.7"	""	"591"	"45"	"34.000"	"27.000"	"0.000878127312378587"	"26"	"0.0001889"	"0.0003918"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAHFLEK"	"[R].vAHFLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"434.60437"	"1301.79856"	"1301.79818"	"0.29"	"0.00013"	"8/48"	"8"	"48"	"15055896.3642578"	"HCD"	"MS2"	"45.29828"	"309.1"	"50.857"	"36.6984"	"9422"	"9422"	"9402"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"427.1"	""	"388.5"	""	"477.5"	""	"520.1"	""	"570.3"	"545.1"	""	"591"	"17"	"34.000"	"27.000"	"0.561768631717335"	"15"	"0.0006037"	"0.004465"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLINILTER"	"[K].tLINILTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"651.40314"	"1301.79900"	"1301.79902"	"-0.01"	"-0.00001"	"7/88"	"7"	"88"	"2440751.41882324"	"HCD"	"MS2"	"32.65826"	"161.2"	"100.000"	"60.1431"	"18958"	"18958"	"18937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.0"	""	"223.9"	""	"235.5"	""	"247.8"	""	"307.6"	"298.9"	""	"591"	"38"	"34.000"	"27.000"	"0.00448288383584235"	"19"	"0.0001308"	"0.0002097"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLINILTER"	"[K].tLINILTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"651.40326"	"1301.79924"	"1301.79902"	"0.17"	"0.00011"	"5/88"	"5"	"88"	"2689702.60333252"	"HCD"	"MS2"	"32.85283"	"158.5"	"100.000"	"60.2697"	"19063"	"19063"	"19043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"221.6"	""	"212.6"	""	"225.3"	""	"241.3"	""	"300.2"	"301.0"	""	"587"	"32"	"34.000"	"27.000"	"0.0188628845032545"	"25"	"0.0001889"	"0.0004539"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLINILTER"	"[K].tLINILTER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"651.40381"	"1301.80034"	"1301.79902"	"1.02"	"0.00066"	"7/88"	"7"	"88"	"15664363.5928345"	"HCD"	"MS2"	"2.266086"	"641.5"	"100.000"	"59.5124"	"18700"	"18700"	"18681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"821.1"	""	"890.2"	""	"952.2"	""	"1034.4"	"0.3"	"1163.9"	"1216.5"	""	"461"	"45"	"33.000"	"26.000"	"0.000677128244777133"	"26"	"0.0001889"	"0.0004486"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELLIDK"	"[R].lELLIDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JHW5"	"Vesicle-associated membrane protein 7 OS=Rattus norvegicus OX=10116 GN=Vamp7 PE=1 SV=1"	"Q9JHW5"	"Vesicle-associated membrane protein 7 OS=Rattus norvegicus OX=10116 GN=Vamp7 PE=1 SV=1"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"3"	"651.42487"	"1301.84245"	"1301.84446"	"-1.54"	"-0.00100"	"12/56"	"12"	"56"	"1899124.45269775"	"HCD"	"MS2"	"0"	"133.9"	"100.000"	"63.2683"	"20288"	"20288"	"20259"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.9"	""	"128.3"	""	"137.2"	""	"285.5"	""	"297.8"	"295.0"	""	"398"	"36"	"32.000"	"25.000"	"0.00553162940284099"	""	"0.0002277"	"0.001343"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEIDLK"	"[R].lLEIDLk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"651.42517"	"1301.84307"	"1301.84446"	"-1.07"	"-0.00070"	"6/52"	"6"	"52"	"3571981.67370605"	"HCD"	"MS2"	"39.96653"	"246.2"	"100.000"	"61.5375"	"19581"	"19581"	"19555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.6"	""	"289.5"	""	"282.5"	""	"465.0"	"3.0"	"488.3"	"464.5"	""	"397"	"29"	"32.000"	"25.000"	"0.0229488280075132"	"25"	"0.0006037"	"0.00499"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEIDLK"	"[R].lLEIDLk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"G3V6S8"	"Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus OX=10116 GN=Srsf6 PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"651.42554"	"1301.84380"	"1301.84446"	"-0.51"	"-0.00033"	"6/52"	"6"	"52"	"3216527.1060791"	"HCD"	"MS2"	"31.51499"	"227.5"	"100.000"	"61.3718"	"19460"	"19460"	"19433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.4"	""	"266.0"	""	"288.6"	""	"422.7"	"1.4"	"441.2"	"439.6"	""	"392"	"29"	"32.000"	"25.000"	"0.0230279920768148"	""	"0.0006037"	"0.00475"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELLIDK"	"[R].lELLIDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JHW5"	"Vesicle-associated membrane protein 7 OS=Rattus norvegicus OX=10116 GN=Vamp7 PE=1 SV=1"	"Q9JHW5"	"Vesicle-associated membrane protein 7 OS=Rattus norvegicus OX=10116 GN=Vamp7 PE=1 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"3"	"651.42609"	"1301.84490"	"1301.84446"	"0.34"	"0.00022"	"12/56"	"12"	"56"	"1865246.73803711"	"HCD"	"MS2"	"31.81491"	"133.8"	"100.000"	"63.2168"	"20214"	"20214"	"20185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.2"	""	"135.3"	""	"147.0"	""	"255.7"	"0.9"	"316.1"	"296.1"	""	"392"	"34"	"32.000"	"25.000"	"0.00789325387277899"	""	"0.0001889"	"0.001096"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLLEK"	"[K].lDLLLEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"3"	"651.42761"	"1301.84795"	"1301.84446"	"2.68"	"0.00174"	"6/56"	"6"	"56"	"2054658.55004883"	"HCD"	"MS2"	"44.96161"	"132.3"	"100.000"	"67.2282"	"21850"	"21850"	"21835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.4"	""	"152.6"	""	"161.1"	""	"251.3"	"3.3"	"258.7"	"252.4"	""	"346"	"32"	"32.000"	"25.000"	"0.0107657949334265"	""	"0.000494"	"0.002725"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTPQTNPR"	"[R].iFTPQTNPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"651.87103"	"1302.73479"	"1302.73675"	"-1.51"	"-0.00098"	"6/78"	"6"	"78"	"5144103.80603027"	"HCD"	"MS2"	"0"	"282.4"	"100.000"	"35.2101"	"8855"	"8855"	"8826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"431.7"	""	"421.8"	""	"395.2"	""	"439.3"	""	"492.4"	"494.5"	""	"947"	"26"	"36.000"	"29.000"	"0.110999234405398"	""	"0.0008731"	"0.009359"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTPQTNPR"	"[R].iFTPQTNPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"651.87189"	"1302.73650"	"1302.73675"	"-0.19"	"-0.00013"	"5/78"	"5"	"78"	"5003472.50756836"	"HCD"	"MS2"	"15.99601"	"277.8"	"100.000"	"35.1573"	"8790"	"8790"	"8766"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"419.4"	""	"433.1"	""	"383.4"	""	"457.4"	"1.2"	"467.8"	"465.7"	""	"893"	"21"	"36.000"	"29.000"	"0.344208398937268"	"26"	"0.0009404"	"0.009975"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAATFSK"	"[K].yGAATFSk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"434.91907"	"1302.74265"	"1302.74581"	"-2.43"	"-0.00105"	"7/60"	"7"	"60"	"19082825.2584229"	"HCD"	"MS2"	"67.74561"	"979.0"	"100.000"	"36.4434"	"9361"	"9361"	"9337"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1521.9"	""	"1547.7"	""	"1423.5"	""	"1673.6"	""	"1518.2"	"1572.6"	""	"875"	"16"	"36.000"	"29.000"	"1.18026100169465"	"18"	"0.008737"	"0.3913"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAATFSK"	"[K].yGAATFSk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"434.91949"	"1302.74393"	"1302.74581"	"-1.44"	"-0.00063"	"8/60"	"8"	"60"	"11872072.0263672"	"HCD"	"MS2"	"30.42576"	"262.7"	"39.127"	"36.4343"	"9314"	"9314"	"9290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"432.3"	""	"434.4"	""	"381.7"	""	"451.7"	""	"392.8"	"390.1"	""	"935"	"26"	"36.000"	"29.000"	"0.120720663912167"	"15"	"0.003197"	"0.06668"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAATFSK"	"[K].yGAATFSk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"651.87561"	"1302.74394"	"1302.74581"	"-1.43"	"-0.00093"	"12/60"	"12"	"60"	"13330736.0791626"	"HCD"	"MS2"	"0"	"1106.0"	"100.000"	"36.3289"	"9314"	"9314"	"9289"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2335.7"	""	"2065.6"	""	"1512.8"	""	"1899.0"	""	"1224.3"	"1374.5"	""	"935"	"38"	"36.000"	"29.000"	"0.00715783388336349"	"23"	"0.0003839"	"0.001588"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAATFSK"	"[K].yGAATFSk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"651.87604"	"1302.74480"	"1302.74581"	"-0.78"	"-0.00050"	"14/60"	"14"	"60"	"23293347.7453613"	"HCD"	"MS2"	"0"	"468.8"	"22.901"	"36.6198"	"9433"	"9433"	"9415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"938.8"	""	"879.9"	""	"679.3"	""	"760.9"	"1.9"	"510.3"	"642.2"	""	"936"	"49"	"36.000"	"29.000"	"0.000565256874829973"	"26"	"0.0001889"	"0.001071"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAATFSK"	"[K].yGAATFSk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"651.87616"	"1302.74504"	"1302.74581"	"-0.59"	"-0.00038"	"12/60"	"12"	"60"	"30468298.335144"	"HCD"	"MS2"	"0"	"2649.2"	"100.000"	"36.2808"	"9251"	"9251"	"9226"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5622.1"	""	"5022.5"	""	"3706.0"	""	"4483.7"	""	"2850.6"	"3254.6"	""	"924"	"34"	"36.000"	"29.000"	"0.018562735461221"	"22"	"0.0003839"	"0.001777"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAATFSK"	"[K].yGAATFSk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"651.87640"	"1302.74553"	"1302.74581"	"-0.21"	"-0.00014"	"7/60"	"7"	"60"	"10329394.1846924"	"HCD"	"MS2"	"0"	"857.4"	"94.187"	"36.5811"	"9374"	"9374"	"9354"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1635.1"	""	"1543.1"	""	"1250.2"	""	"1433.3"	"2.3"	"1028.5"	"1186.2"	""	"924"	"46"	"36.000"	"29.000"	"0.00120960054979717"	"23"	"0.0001889"	"0.001001"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLASINSTVR"	"[K].lLASINSTVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"651.90033"	"1302.79338"	"1302.79427"	"-0.68"	"-0.00044"	"8/88"	"8"	"88"	"3412817.02807617"	"HCD"	"MS2"	"0"	"205.6"	"100.000"	"44.3117"	"12526"	"12526"	"12502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"277.9"	""	"281.7"	""	"263.1"	""	"288.3"	"4.7"	"430.8"	"404.5"	""	"678"	"46"	"35.000"	"28.000"	"0.000904065087272781"	"23"	"0"	"9.819E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLASINSTVR"	"[K].lLASINSTVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"651.90051"	"1302.79375"	"1302.79427"	"-0.40"	"-0.00026"	"8/88"	"8"	"88"	"3259532.90393066"	"HCD"	"MS2"	"0"	"197.6"	"100.000"	"44.4793"	"12644"	"12644"	"12620"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.0"	""	"261.8"	""	"286.1"	""	"297.5"	""	"377.4"	"380.6"	""	"673"	"47"	"35.000"	"28.000"	"0.000680745953625239"	"25"	"0"	"9.782E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFVGHTK"	"[R].rFVGHTk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.90485"	"1302.80242"	"1302.80466"	"-1.72"	"-0.00112"	"5/60"	"5"	"60"	"566372.062438965"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"21.9954"	"3507"	"3507"	"3485"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.6"	""	"52.1"	""	"54.3"	""	"53.2"	""	"61.2"	"56.6"	""	"626"	"14"	"34.000"	"27.000"	"1.20377227780196"	"13"	"0.00803"	"0.3289"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFVGHTK"	"[R].rFVGHTk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.90497"	"1302.80266"	"1302.80466"	"-1.54"	"-0.00100"	"5/60"	"5"	"60"	"637227.895629883"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"21.9830"	"3537"	"3537"	"3513"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.5"	""	"58.8"	""	"62.7"	""	"55.8"	""	"59.6"	"62.4"	""	"607"	"15"	"34.000"	"27.000"	"1.05234634112343"	"13"	"0.00103"	"0.01133"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFVGHTK"	"[R].rFVGHTk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"434.93927"	"1302.80326"	"1302.80466"	"-1.08"	"-0.00047"	"6/60"	"6"	"60"	"14613029.6793823"	"HCD"	"MS2"	"11.16555"	"721.5"	"93.275"	"21.9620"	"3528"	"3528"	"3513"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1089.1"	""	"1076.6"	""	"1105.3"	""	"1137.3"	""	"1193.3"	"1228.6"	""	"605"	"11"	"34.000"	"27.000"	"2.22702646992158"	"13"	"0.000523"	"0.002833"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFVGHTK"	"[R].rFVGHTk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"434.93936"	"1302.80353"	"1302.80466"	"-0.87"	"-0.00038"	"6/60"	"6"	"60"	"12451663.479248"	"HCD"	"MS2"	"13.63149"	"671.3"	"100.000"	"21.9355"	"3488"	"3488"	"3479"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1013.8"	""	"997.3"	""	"1026.6"	""	"1041.4"	""	"1110.8"	"1166.2"	""	"605"	"13"	"34.000"	"27.000"	"1.57661400109287"	"13"	"0.0006037"	"0.005551"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPPGVFSK"	"[R].iPPGVFSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"651.91235"	"1302.81743"	"1302.81858"	"-0.88"	"-0.00057"	"6/56"	"6"	"56"	"13130154.87854"	"HCD"	"MS2"	"31.4003"	"438.5"	"96.028"	"49.3066"	"14611"	"14611"	"14590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.1"	""	"219.7"	""	"248.9"	""	"1138.7"	""	"1220.9"	"1163.7"	""	"562"	"26"	"34.000"	"27.000"	"0.0699368906437351"	"27"	"0.006471"	"0.2334"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPPGVFSK"	"[R].iPPGVFSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"651.91266"	"1302.81804"	"1302.81858"	"-0.41"	"-0.00027"	"6/56"	"6"	"56"	"11798745.142334"	"HCD"	"MS2"	"18.27176"	"422.7"	"100.000"	"48.9926"	"14435"	"14435"	"14415"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"227.9"	""	"243.5"	""	"263.9"	""	"1033.1"	""	"1127.2"	"1147.7"	""	"560"	"26"	"34.000"	"27.000"	"0.0767640768139806"	"26"	"0.003197"	"0.06577"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPPGVFSK"	"[R].iPPGVFSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"651.91266"	"1302.81804"	"1302.81858"	"-0.41"	"-0.00027"	"5/56"	"5"	"56"	"7517114.79144287"	"HCD"	"MS2"	"72.55914"	"453.1"	"100.000"	"49.3237"	"14571"	"14571"	"14543"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"633.8"	""	"659.7"	""	"539.7"	""	"806.5"	""	"847.5"	"809.2"	""	"560"	"20"	"34.000"	"27.000"	"0.253021852642244"	"26"	"0.008371"	"0.3525"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPPGVFSK"	"[R].iPPGVFSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"651.91296"	"1302.81865"	"1302.81858"	"0.05"	"0.00004"	"7/56"	"7"	"56"	"10345195.7294312"	"HCD"	"MS2"	"4.790432"	"394.4"	"100.000"	"48.9962"	"14484"	"14484"	"14463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"262.5"	""	"270.0"	""	"298.9"	""	"960.5"	"2.1"	"1001.0"	"969.3"	""	"559"	"33"	"34.000"	"27.000"	"0.0149755165774979"	""	"0.00103"	"0.01203"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPPGVFSK"	"[R].iPPGVFSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"651.91302"	"1302.81877"	"1302.81858"	"0.15"	"0.00010"	"7/56"	"7"	"56"	"8488681.71832275"	"HCD"	"MS2"	"3.638323"	"345.8"	"100.000"	"48.6821"	"14308"	"14308"	"14287"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"253.3"	""	"261.7"	""	"280.4"	""	"817.8"	"0.7"	"861.6"	"823.0"	""	"559"	"32"	"34.000"	"27.000"	"0.0163072906644512"	""	"0.000523"	"0.002962"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVVPAALK"	"[R].mVVPAALk.[V]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.91394"	"1302.82060"	"1302.82195"	"-1.03"	"-0.00067"	"7/58"	"7"	"58"	"6912748.2286377"	"HCD"	"MS2"	"12.7655"	"354.6"	"100.000"	"38.5000"	"10162"	"10162"	"10135"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"395.4"	""	"430.5"	""	"456.4"	""	"825.1"	"1.4"	"653.2"	"599.3"	""	"486"	"34"	"33.000"	"26.000"	"0.00894553405951351"	"15"	"0.001966"	"0.02847"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVVPAALK"	"[R].mVVPAALk.[V]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.91479"	"1302.82231"	"1302.82195"	"0.28"	"0.00018"	"7/58"	"7"	"58"	"6958154.71173096"	"HCD"	"MS2"	"24.39732"	"373.0"	"100.000"	"38.5998"	"10246"	"10246"	"10225"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"411.1"	""	"468.0"	""	"490.4"	""	"857.3"	"4.7"	"674.6"	"628.5"	""	"486"	"31"	"33.000"	"26.000"	"0.0214094876140947"	"14"	"0.002829"	"0.0462"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAMTIAK"	"[K].iPAMTIAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"651.91504"	"1302.82280"	"1302.82195"	"0.65"	"0.00043"	"6/56"	"6"	"56"	"16410847.6744385"	"HCD"	"MS2"	"7.09585"	"876.7"	"100.000"	"47.2116"	"13706"	"13706"	"13688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1540.2"	""	"1347.4"	""	"1303.4"	""	"890.7"	""	"1565.0"	"1658.0"	""	"486"	"39"	"33.000"	"26.000"	"0.00276443430455094"	"21"	"0.0002277"	"0.00112"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAMTIAK"	"[K].iPAMTIAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"651.91528"	"1302.82329"	"1302.82195"	"1.03"	"0.00067"	"6/56"	"6"	"56"	"17544856.2693481"	"HCD"	"MS2"	"3.551606"	"913.5"	"100.000"	"47.5097"	"13876"	"13876"	"13858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1611.1"	""	"1376.3"	""	"1391.7"	""	"961.1"	""	"1640.1"	"1664.0"	""	"483"	"40"	"33.000"	"26.000"	"0.00269102129862403"	"20"	"0.0003146"	"0.001404"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"RVTIMPK"	"[].rVTIMPk.[]"	"N-Term(TMT6plex); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"6"	"434.94904"	"1302.83255"	"1302.83318"	"-0.48"	"-0.00021"	"4/60"	"4"	"60"	"4518965.23028564"	"HCD"	"MS2"	"15.29535"	"387.8"	"100.000"	"31.4429"	"7280"	"7280"	"7254"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"504.6"	""	"530.7"	""	"543.9"	""	"536.3"	"9.8"	"721.4"	"831.3"	""	"474"	"7"	"33.000"	"26.000"	"4.72877168647624"	"16"	"0.003107"	"0.06122"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGALELLK"	"[K].tGALELLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.5806"	"0.0000"	"1"	"1"	"1"	"434.95068"	"1302.83750"	"1302.83971"	"-1.70"	"-0.00074"	"6/64"	"6"	"64"	"4653774.1159668"	"HCD"	"MS2"	"41.34992"	"216.3"	"100.000"	"50.0033"	"14892"	"14892"	"14862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"271.8"	""	"279.3"	""	"302.1"	""	"364.2"	"2.6"	"378.1"	"452.2"	""	"466"	"31"	"33.000"	"26.000"	"0.0195144322735564"	""	"0.0001889"	"0.001092"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGALELLK"	"[K].tGALELLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"651.92242"	"1302.83757"	"1302.83971"	"-1.64"	"-0.00107"	"12/64"	"12"	"64"	"13764317.9858398"	"HCD"	"MS2"	"0"	"464.3"	"43.860"	"50.1135"	"14936"	"14936"	"14919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"620.8"	""	"618.9"	""	"611.8"	""	"803.1"	"0.9"	"806.0"	"938.8"	""	"466"	"40"	"33.000"	"26.000"	"0.00223540347143212"	""	"0.0002277"	"0.001308"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGALELLK"	"[K].tGALELLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"434.95074"	"1302.83768"	"1302.83971"	"-1.56"	"-0.00068"	"6/64"	"6"	"64"	"4418790.4161377"	"HCD"	"MS2"	"26.01362"	"205.0"	"100.000"	"49.7514"	"14742"	"14742"	"14719"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.0"	""	"255.4"	""	"288.9"	""	"358.0"	""	"360.1"	"406.2"	""	"466"	"32"	"33.000"	"26.000"	"0.0152179418766861"	""	"0.0002277"	"0.001298"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEVIVTK"	"[K].vGEVIVTk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"651.92261"	"1302.83794"	"1302.83971"	"-1.36"	"-0.00089"	"12/64"	"12"	"64"	"5921229.78717041"	"HCD"	"MS2"	"0"	"435.2"	"100.000"	"39.8606"	"10762"	"10762"	"10734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"622.1"	""	"635.0"	""	"685.3"	""	"676.8"	""	"734.2"	"769.0"	""	"464"	"39"	"33.000"	"26.000"	"0.00324704258836848"	"26"	"0.0002277"	"0.001157"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGALELLK"	"[K].tGALELLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"651.92291"	"1302.83855"	"1302.83971"	"-0.89"	"-0.00058"	"12/64"	"12"	"64"	"4446117.04980469"	"HCD"	"MS2"	"0"	"360.9"	"100.000"	"49.9631"	"14827"	"14827"	"14809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"469.6"	""	"487.1"	""	"475.1"	""	"604.3"	""	"656.3"	"732.2"	""	"464"	"35"	"33.000"	"26.000"	"0.00773549277610705"	""	"0.0001889"	"0.000787"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEVIVTK"	"[K].vGEVIVTk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"651.92303"	"1302.83879"	"1302.83971"	"-0.70"	"-0.00046"	"12/64"	"12"	"64"	"5685188.2220459"	"HCD"	"MS2"	"0"	"441.1"	"100.000"	"39.7419"	"10672"	"10672"	"10645"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"635.1"	""	"641.7"	""	"682.4"	""	"701.0"	""	"761.8"	"752.7"	""	"464"	"38"	"33.000"	"26.000"	"0.00335342026813055"	"26"	"0.0001889"	"0.0007542"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGALELLK"	"[K].tGALELLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"651.92310"	"1302.83891"	"1302.83971"	"-0.61"	"-0.00040"	"12/64"	"12"	"64"	"54627851.0483398"	"HCD"	"MS2"	"11.45204"	"1239.5"	"30.165"	"49.6671"	"14707"	"14707"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1679.4"	""	"1623.7"	""	"1624.3"	""	"2119.5"	"1.8"	"2137.8"	"2560.3"	""	"452"	"38"	"33.000"	"26.000"	"0.0034285338304581"	""	"0.0006037"	"0.006159"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELTGLK"	"[K].aLELTGLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"651.92340"	"1302.83953"	"1302.83971"	"-0.14"	"-0.00009"	"7/60"	"7"	"60"	"14947357.5161133"	"HCD"	"MS2"	"20.14372"	"469.9"	"41.783"	"49.8254"	"14818"	"14818"	"14798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"599.1"	""	"543.6"	""	"605.8"	""	"860.1"	""	"915.8"	"934.3"	""	"452"	"46"	"33.000"	"26.000"	"0.000595810893196536"	"22"	"0.0002277"	"0.001156"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTAEIVK"	"[K].aLTAEIVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"651.92365"	"1302.84001"	"1302.83971"	"0.23"	"0.00015"	"4/60"	"4"	"60"	"6968174.41186523"	"HCD"	"MS2"	"12.06236"	"527.4"	"100.000"	"47.7153"	"13913"	"13913"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"849.3"	""	"824.3"	""	"718.2"	""	"695.6"	"1.8"	"970.7"	"934.0"	""	"452"	"19"	"33.000"	"26.000"	"0.268601503400766"	"24"	"0.0009404"	"0.01017"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTAEIVK"	"[K].aLTAEIVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"651.92419"	"1302.84111"	"1302.83971"	"1.08"	"0.00070"	"4/60"	"4"	"60"	"6989650.06512451"	"HCD"	"MS2"	"13.66595"	"519.3"	"100.000"	"48.0203"	"14085"	"14085"	"14066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"843.3"	""	"783.4"	""	"726.7"	""	"689.2"	"8.4"	"929.7"	"935.1"	""	"355"	"19"	"32.000"	"25.000"	"0.204267069037637"	"24"	"0.0008453"	"0.007945"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFLLGIK"	"[K].gPFLLGIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"651.93036"	"1302.85344"	"1302.85497"	"-1.17"	"-0.00076"	"7/58"	"7"	"58"	"2985131.59136963"	"HCD"	"MS2"	"24.09249"	"210.1"	"100.000"	"61.4083"	"19528"	"19528"	"19507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"300.9"	""	"275.7"	""	"291.0"	""	"320.6"	""	"403.9"	"402.4"	""	"266"	"30"	"31.000"	"24.000"	"0.0128484766905645"	"24"	"0.0001889"	"0.001008"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFLLGIK"	"[K].gPFLLGIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"651.93054"	"1302.85381"	"1302.85497"	"-0.89"	"-0.00058"	"7/58"	"7"	"58"	"6052889.94335938"	"HCD"	"MS2"	"10.64625"	"432.7"	"100.000"	"61.0877"	"19397"	"19397"	"19379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"682.0"	""	"653.6"	""	"663.2"	""	"661.3"	""	"714.7"	"718.7"	""	"266"	"35"	"31.000"	"24.000"	"0.00456932070706833"	""	"0.0001889"	"0.0008869"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFLLGIK"	"[K].gPFLLGIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"651.93060"	"1302.85393"	"1302.85497"	"-0.79"	"-0.00052"	"12/58"	"12"	"58"	"6003211.50683594"	"HCD"	"MS2"	"23.33538"	"457.8"	"100.000"	"60.9316"	"19280"	"19280"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"708.2"	""	"650.7"	""	"684.0"	""	"723.0"	""	"786.9"	"782.7"	""	"266"	"34"	"31.000"	"24.000"	"0.0053932635214635"	""	"0.0003146"	"0.001434"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFLLGIK"	"[K].gPFLLGIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"651.93115"	"1302.85503"	"1302.85497"	"0.05"	"0.00003"	"6/58"	"6"	"58"	"3169820.24969482"	"HCD"	"MS2"	"17.45461"	"220.6"	"100.000"	"61.2402"	"19406"	"19406"	"19385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"323.5"	""	"282.1"	""	"308.3"	""	"349.3"	"2.2"	"416.6"	"408.0"	""	"266"	"31"	"31.000"	"24.000"	"0.0100196289976584"	""	"0.0002277"	"0.001312"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGGDVQK"	"[K].eIGGDVQk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"652.38495"	"1303.76262"	"1303.76219"	"0.33"	"0.00022"	"5/66"	"5"	"66"	"573076.971252441"	"HCD"	"MS2"	"23.50974"	"64.5"	"100.000"	"31.6722"	"7416"	"7416"	"7389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.6"	""	"81.4"	""	"87.2"	""	"105.2"	"3.0"	"116.2"	"116.0"	""	"804"	"21"	"36.000"	"29.000"	"0.297321320573412"	"24"	"0.0008731"	"0.008698"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEWNGK"	"[K].iVEWNGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"652.39148"	"1303.77568"	"1303.77744"	"-1.35"	"-0.00088"	"12/52"	"12"	"52"	"5987129.00274658"	"HCD"	"MS2"	"15.6745"	"495.0"	"100.000"	"42.3702"	"11786"	"11786"	"11767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"688.2"	""	"694.3"	""	"687.5"	""	"749.2"	""	"909.8"	"962.8"	""	"750"	"23"	"35.000"	"28.000"	"0.184514825880544"	"26"	"0.0006037"	"0.004325"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEWNGK"	"[K].iVEWNGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"652.39160"	"1303.77593"	"1303.77744"	"-1.16"	"-0.00076"	"6/52"	"6"	"52"	"6146963.53417969"	"HCD"	"MS2"	"22.06286"	"512.3"	"100.000"	"42.1568"	"11655"	"11655"	"11631"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"681.0"	""	"719.0"	""	"702.1"	""	"834.9"	""	"944.1"	"975.4"	""	"750"	"21"	"35.000"	"28.000"	"0.270415304693587"	"25"	"0.0006037"	"0.005514"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIPMNAK"	"[K].gVIPmNAk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.39386"	"1303.78044"	"1303.78081"	"-0.28"	"-0.00019"	"9/62"	"9"	"62"	"537238.857177734"	"HCD"	"MS2"	"0"	"56.8"	"100.000"	"32.0300"	"7521"	"7521"	"7490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.2"	""	"79.5"	""	"81.3"	""	"86.0"	""	"94.1"	"109.1"	""	"689"	"7"	"35.000"	"28.000"	"6.79499632591567"	"13"	"0.005353"	"0.1663"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLLEDLK"	"[R].dLLEDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.39771"	"1303.78813"	"1303.78734"	"0.61"	"0.00040"	"10/56"	"10"	"56"	"4765993.08111572"	"HCD"	"MS2"	"34.32244"	"331.4"	"100.000"	"55.2795"	"16975"	"16975"	"16955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.7"	""	"400.1"	""	"435.9"	""	"551.6"	"9.7"	"720.6"	"659.7"	""	"730"	"24"	"35.000"	"28.000"	"0.148351815145303"	""	"0.0006037"	"0.003762"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLLQDLK"	"[].dLLqDLk.[]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"652.39771"	"1303.78813"	"1303.78734"	"0.61"	"0.00040"	"10/62"	"10"	"62"	"4765993.08111572"	"HCD"	"MS2"	"34.32244"	"331.4"	"100.000"	"55.2795"	"16975"	"16975"	"16955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.7"	""	"400.1"	""	"435.9"	""	"551.6"	"9.7"	"720.6"	"659.7"	""	"730"	"24"	"35.000"	"28.000"	"0.148351815145303"	""	"0.0006037"	"0.003762"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDPLIK"	"[R].yPDPLIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"652.40485"	"1303.80242"	"1303.80260"	"-0.14"	"-0.00009"	"6/48"	"6"	"48"	"5302542.29382324"	"HCD"	"MS2"	"41.83043"	"358.6"	"100.000"	"45.0735"	"12885"	"12885"	"12859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"452.6"	""	"407.9"	""	"493.0"	""	"595.8"	""	"765.7"	"693.2"	""	"637"	"19"	"35.000"	"28.000"	"0.382040528053077"	"18"	"0.0006037"	"0.005425"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDPLIK"	"[R].yPDPLIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"652.40497"	"1303.80266"	"1303.80260"	"0.05"	"0.00003"	"6/48"	"6"	"48"	"5541792.70581055"	"HCD"	"MS2"	"22.53954"	"375.9"	"100.000"	"44.8529"	"12746"	"12746"	"12720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"446.5"	""	"449.4"	""	"480.8"	""	"645.2"	""	"809.2"	"741.6"	""	"633"	"13"	"35.000"	"28.000"	"1.43672521669789"	"20"	"0.0009404"	"0.01028"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVSLAALK"	"[R].sGVSLAALk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D4A3K5; P15865"	"Histone H1.1 OS=Rattus norvegicus OX=10116 GN=Hist1h1a PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"3"	"3"	"0.3611"	"0.0000"	"1"	"1"	"1"	"435.28232"	"1303.83240"	"1303.83496"	"-1.96"	"-0.00085"	"6/70"	"6"	"70"	"6697822.67779541"	"HCD"	"MS2"	"52.74078"	"291.1"	"100.000"	"43.0719"	"12074"	"12074"	"12051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"349.8"	""	"468.8"	""	"587.7"	""	"406.5"	""	"561.6"	"382.1"	""	"498"	"36"	"33.000"	"26.000"	"0.00692148603672063"	""	"0.0003839"	"0.00161"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVSLAALK"	"[R].sGVSLAALk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D4A3K5; P15865"	"Histone H1.1 OS=Rattus norvegicus OX=10116 GN=Hist1h1a PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"652.41986"	"1303.83245"	"1303.83496"	"-1.93"	"-0.00126"	"13/70"	"13"	"70"	"3272154.20666504"	"HCD"	"MS2"	"0"	"263.3"	"100.000"	"43.0263"	"12008"	"12008"	"11996"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.3"	""	"411.0"	""	"460.3"	""	"383.2"	"2.7"	"501.9"	"388.7"	""	"498"	"50"	"33.000"	"26.000"	"0.000227614197126092"	""	"0.0001889"	"0.0004284"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVSLAALK"	"[R].sGVSLAALk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D4A3K5; P15865"	"Histone H1.1 OS=Rattus norvegicus OX=10116 GN=Hist1h1a PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"3"	"3"	"0.3529"	"0.0000"	"1"	"1"	"1"	"435.28241"	"1303.83268"	"1303.83496"	"-1.75"	"-0.00076"	"7/70"	"7"	"70"	"6463504.53826904"	"HCD"	"MS2"	"40.15883"	"263.2"	"100.000"	"42.8431"	"11936"	"11936"	"11915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"357.8"	""	"415.7"	""	"505.2"	""	"363.3"	""	"495.3"	"354.3"	""	"498"	"34"	"33.000"	"26.000"	"0.00929392892911345"	""	"0.0002277"	"0.00135"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVSLAALK"	"[R].sGVSLAALk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D4A3K5; P15865"	"Histone H1.1 OS=Rattus norvegicus OX=10116 GN=Hist1h1a PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"652.42004"	"1303.83281"	"1303.83496"	"-1.65"	"-0.00107"	"8/70"	"8"	"70"	"42080989.2185059"	"HCD"	"MS2"	"17.21691"	"686.6"	"21.759"	"42.7563"	"11901"	"11901"	"11884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"951.3"	""	"1141.4"	""	"1291.5"	""	"950.2"	""	"1291.5"	"869.9"	""	"498"	"49"	"33.000"	"26.000"	"0.000304228115381053"	""	"0.0004166"	"0.002199"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVSLAALK"	"[R].sGVSLAALk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D4A3K5; P15865"	"Histone H1.1 OS=Rattus norvegicus OX=10116 GN=Hist1h1a PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"652.42023"	"1303.83318"	"1303.83496"	"-1.37"	"-0.00089"	"8/70"	"8"	"70"	"38427406.2086182"	"HCD"	"MS2"	"29.7904"	"1010.0"	"36.345"	"43.0215"	"12053"	"12053"	"12035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1366.1"	""	"1658.4"	""	"1952.1"	""	"1364.5"	""	"1879.4"	"1331.1"	""	"498"	"49"	"33.000"	"26.000"	"0.000304929433616998"	""	"0.000523"	"0.002875"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVAQLVK"	"[R].sTVAQLVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"652.42084"	"1303.83440"	"1303.83496"	"-0.43"	"-0.00028"	"14/64"	"14"	"64"	"43967256.767334"	"HCD"	"MS2"	"0"	"958.8"	"35.114"	"38.1281"	"10052"	"10052"	"10033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1085.7"	""	"1311.7"	""	"1354.2"	""	"1624.8"	"8.5"	"1822.8"	"1886.4"	""	"483"	"46"	"33.000"	"26.000"	"0.000596921381021395"	"24"	"0.002033"	"0.03152"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVAQLVK"	"[R].sTVAQLVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"652.42084"	"1303.83440"	"1303.83496"	"-0.43"	"-0.00028"	"14/64"	"14"	"64"	"34700047.7996826"	"HCD"	"MS2"	"2.662167"	"1324.5"	"61.299"	"38.0171"	"9963"	"9963"	"9943"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1547.1"	""	"1853.0"	""	"1909.1"	""	"2174.1"	"3.7"	"2474.3"	"2598.0"	""	"483"	"46"	"33.000"	"26.000"	"0.000598297426918438"	"24"	"0.002361"	"0.03458"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLISASIK"	"[R].gGLISASIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"652.42090"	"1303.83452"	"1303.83496"	"-0.34"	"-0.00022"	"13/68"	"13"	"68"	"3571642.32012939"	"HCD"	"MS2"	"23.21788"	"293.8"	"100.000"	"40.9581"	"11167"	"11167"	"11141"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.3"	""	"343.4"	""	"365.8"	""	"477.9"	""	"592.5"	"692.8"	""	"483"	"49"	"33.000"	"26.000"	"0.000293033407387292"	""	"0"	"0.0001505"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVQVLK"	"[R].tGTVQVLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"652.42096"	"1303.83464"	"1303.83496"	"-0.24"	"-0.00016"	"6/66"	"6"	"66"	"1917999.01715088"	"HCD"	"MS2"	"18.3785"	"169.1"	"100.000"	"35.6321"	"9028"	"9028"	"9001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.1"	""	"220.9"	""	"213.0"	""	"273.7"	"3.5"	"327.9"	"339.1"	""	"483"	"38"	"33.000"	"26.000"	"0.00374901462904876"	""	"0.009705"	"0.4382"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVSLAALK"	"[R].sGVSLAALk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D4A3K5; P15865"	"Histone H1.1 OS=Rattus norvegicus OX=10116 GN=Hist1h1a PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"652.42102"	"1303.83476"	"1303.83496"	"-0.15"	"-0.00010"	"7/70"	"7"	"70"	"2226126.17486572"	"HCD"	"MS2"	"100"	"214.0"	"100.000"	"43.3490"	"12184"	"12184"	"12166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.4"	""	"318.6"	""	"344.6"	""	"342.6"	"3.9"	"425.3"	"337.1"	""	"483"	"42"	"33.000"	"26.000"	"0.00156284941703283"	""	"0.0002277"	"0.001358"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLISASIK"	"[R].gGLISASIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"652.42175"	"1303.83623"	"1303.83496"	"0.98"	"0.00064"	"8/68"	"8"	"68"	"2275667.41662598"	"HCD"	"MS2"	"32.09693"	"215.1"	"100.000"	"41.1852"	"11304"	"11304"	"11277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"257.5"	""	"269.4"	""	"275.8"	""	"345.1"	"1.0"	"426.2"	"466.9"	""	"378"	"34"	"32.000"	"25.000"	"0.00815571055204476"	""	"0.0001308"	"0.0002858"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMELLLK"	"[R].vMELLLk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"652.42413"	"1303.84099"	"1303.84235"	"-1.04"	"-0.00068"	"12/48"	"12"	"48"	"3344764.46911621"	"HCD"	"MS2"	"0"	"239.2"	"100.000"	"67.1813"	"21879"	"21879"	"21869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.0"	""	"304.5"	""	"307.3"	""	"380.7"	""	"500.8"	"500.4"	""	"364"	"35"	"32.000"	"25.000"	"0.00529750515488122"	""	"0.0006037"	"0.003968"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQWSNK"	"[K].lAQWSNk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.6190"	"0.0000"	"1"	"1"	"1"	"435.59500"	"1304.77045"	"1304.77269"	"-1.72"	"-0.00075"	"6/56"	"6"	"56"	"8433898.49615479"	"HCD"	"MS2"	"33.58865"	"228.8"	"100.000"	"38.3502"	"10144"	"10144"	"10113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"317.6"	""	"298.8"	""	"333.7"	""	"375.0"	"4.5"	"432.5"	"406.4"	""	"904"	"21"	"36.000"	"29.000"	"0.320729151119452"	"22"	"0.003286"	"0.07393"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQWSNK"	"[K].lAQWSNk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"652.88959"	"1304.77190"	"1304.77269"	"-0.61"	"-0.00040"	"6/56"	"6"	"56"	"28061614.2902832"	"HCD"	"MS2"	"19.45761"	"683.0"	"29.247"	"38.2092"	"10042"	"10042"	"10023"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1046.5"	""	"905.6"	""	"969.6"	""	"1073.2"	""	"1311.2"	"1171.6"	""	"877"	"26"	"36.000"	"29.000"	"0.112971682734563"	"21"	"0.001686"	"0.02316"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLWNGQK"	"[K].tLWNGQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"652.88965"	"1304.77202"	"1304.77269"	"-0.51"	"-0.00034"	"10/54"	"10"	"54"	"10709830.7520142"	"HCD"	"MS2"	"0"	"806.9"	"100.000"	"37.6014"	"9793"	"9793"	"9768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1334.2"	""	"1131.9"	""	"1151.7"	""	"1264.3"	"2.8"	"1347.2"	"1400.1"	""	"875"	"26"	"36.000"	"29.000"	"0.115074224645423"	"20"	"0.0006037"	"0.006142"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLWNGQK"	"[K].tLWNGQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"652.88965"	"1304.77202"	"1304.77269"	"-0.51"	"-0.00034"	"10/54"	"10"	"54"	"10293945.5366821"	"HCD"	"MS2"	"0"	"837.1"	"100.000"	"37.7130"	"9882"	"9882"	"9857"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1376.0"	""	"1187.0"	""	"1199.3"	""	"1307.0"	"3.6"	"1422.2"	"1423.4"	""	"875"	"27"	"36.000"	"29.000"	"0.0816541114740168"	"23"	"0.0006037"	"0.005898"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQWSNK"	"[K].lAQWSNk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"652.88977"	"1304.77226"	"1304.77269"	"-0.33"	"-0.00021"	"6/56"	"6"	"56"	"24601163.2282715"	"HCD"	"MS2"	"34.35207"	"983.6"	"53.337"	"38.2884"	"10118"	"10118"	"10097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1515.8"	""	"1301.7"	""	"1417.6"	""	"1513.9"	""	"1874.4"	"1699.8"	""	"844"	"23"	"36.000"	"29.000"	"0.200591465347864"	"19"	"0.00119"	"0.01561"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGQILWFR"	"[R].rGQILWFR.[G]"	"N-Term(TMT6plex)"	"1"	"3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11506; Q64568; P11505"	"Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2b2 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"1"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"435.59747"	"1304.77787"	"1304.77889"	"-0.79"	"-0.00034"	"7/72"	"7"	"72"	"3022873.05651855"	"HCD"	"MS2"	"25.53447"	"105.7"	"100.000"	"40.5360"	"10994"	"10994"	"10965"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.5"	""	"135.3"	""	"161.2"	""	"187.2"	"2.8"	"187.3"	"195.9"	""	"845"	"23"	"36.000"	"29.000"	"0.192232455413395"	"15"	"0.0001889"	"0.0005598"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"652.90033"	"1304.79338"	"1304.79784"	"-3.42"	"-0.00223"	"10/54"	"10"	"54"	"4505617.48950195"	"HCD"	"MS2"	"19.21383"	"335.0"	"100.000"	"55.4438"	"17096"	"17096"	"17077"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"340.8"	""	"368.5"	""	"374.9"	""	"661.1"	""	"713.0"	"735.7"	""	"835"	"18"	"36.000"	"29.000"	"0.710651177254892"	"27"	"0.00103"	"0.0115"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"435.60318"	"1304.79499"	"1304.79784"	"-2.19"	"-0.00095"	"5/54"	"5"	"54"	"6158652.16339111"	"HCD"	"MS2"	"15.47725"	"260.2"	"100.000"	"54.8788"	"16865"	"16865"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.4"	""	"206.5"	""	"172.0"	""	"727.2"	""	"468.1"	"702.1"	""	"811"	"27"	"36.000"	"29.000"	"0.0874965357911406"	"23"	"0.000523"	"0.002886"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNIPDLK"	"[K].fNIPDLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"435.60352"	"1304.79599"	"1304.79784"	"-1.42"	"-0.00062"	"5/58"	"5"	"58"	"1055588.19403076"	"HCD"	"MS2"	"16.88333"	"60.5"	"100.000"	"56.6962"	"17554"	"17554"	"17531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.6"	""	"71.9"	""	"88.6"	""	"104.1"	""	"111.9"	"126.8"	""	"805"	"21"	"36.000"	"29.000"	"0.289578213646489"	"23"	"0.0003146"	"0.001403"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"435.60373"	"1304.79663"	"1304.79784"	"-0.93"	"-0.00040"	"5/54"	"5"	"54"	"2379791.55023193"	"HCD"	"MS2"	"11.01004"	"113.8"	"100.000"	"55.1843"	"16990"	"16990"	"16965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.9"	""	"102.2"	""	"112.5"	""	"261.2"	""	"209.5"	"302.0"	""	"805"	"24"	"36.000"	"29.000"	"0.172094061676013"	"22"	"0.0008125"	"0.007639"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"652.90198"	"1304.79668"	"1304.79784"	"-0.89"	"-0.00058"	"6/54"	"6"	"54"	"4459467.7131958"	"HCD"	"MS2"	"24.15563"	"361.8"	"100.000"	"55.2013"	"16943"	"16943"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"362.7"	""	"380.3"	""	"396.2"	""	"767.1"	""	"764.9"	"778.6"	""	"805"	"23"	"36.000"	"29.000"	"0.1844021094026"	"28"	"0.0005564"	"0.003555"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"652.90216"	"1304.79704"	"1304.79784"	"-0.61"	"-0.00040"	"6/54"	"6"	"54"	"4667967.38095093"	"HCD"	"MS2"	"17.8372"	"364.2"	"100.000"	"55.3795"	"17070"	"17070"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"358.3"	""	"400.9"	""	"400.7"	""	"752.5"	""	"769.3"	"787.7"	""	"805"	"32"	"36.000"	"29.000"	"0.0254545770178929"	"29"	"0.0004166"	"0.002326"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNIPDLK"	"[K].fNIPDLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"3"	"3"	"0.5600"	"0.0000"	"1"	"1"	"1"	"435.60388"	"1304.79709"	"1304.79784"	"-0.58"	"-0.00025"	"5/58"	"5"	"58"	"943633.577392578"	"HCD"	"MS2"	"0"	"50.8"	"100.000"	"56.9081"	"17695"	"17695"	"17669"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.4"	""	"59.3"	""	"68.4"	""	"86.9"	""	"101.0"	"107.1"	""	"805"	"25"	"36.000"	"29.000"	"0.1185129707604"	"25"	"0.0003839"	"0.001987"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"435.60406"	"1304.79764"	"1304.79784"	"-0.16"	"-0.00007"	"5/54"	"5"	"54"	"7038407.03546143"	"HCD"	"MS2"	"0"	"282.6"	"100.000"	"54.7162"	"16745"	"16745"	"16720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.7"	""	"228.2"	""	"198.6"	""	"789.1"	""	"530.6"	"718.2"	""	"806"	"22"	"36.000"	"29.000"	"0.26687325099181"	"21"	"0.000523"	"0.002833"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNIPDLK"	"[K].fNIPDLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"652.90265"	"1304.79802"	"1304.79784"	"0.14"	"0.00009"	"12/58"	"12"	"58"	"4209701.12030029"	"HCD"	"MS2"	"19.36522"	"300.2"	"100.000"	"56.7471"	"17629"	"17629"	"17605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"404.6"	""	"376.5"	""	"424.5"	""	"531.4"	"2.4"	"562.8"	"542.1"	""	"804"	"34"	"36.000"	"29.000"	"0.014329335563735"	"26"	"0.0006037"	"0.005293"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"652.90265"	"1304.79802"	"1304.79784"	"0.14"	"0.00009"	"6/54"	"6"	"54"	"58678483.2275391"	"HCD"	"MS2"	"1.206298"	"717.3"	"18.759"	"55.0466"	"16934"	"16934"	"16917"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"599.2"	""	"565.3"	""	"511.3"	""	"2031.2"	""	"1415.4"	"1712.1"	""	"804"	"34"	"36.000"	"29.000"	"0.0166045095800045"	"26"	"0.001846"	"0.0255"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"652.90277"	"1304.79827"	"1304.79784"	"0.32"	"0.00021"	"6/54"	"6"	"54"	"2317875.53381348"	"HCD"	"MS2"	"0"	"173.2"	"100.000"	"54.2656"	"16561"	"16561"	"16541"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.7"	""	"156.7"	""	"143.7"	""	"458.4"	"1.1"	"333.5"	"380.9"	""	"804"	"31"	"36.000"	"29.000"	"0.0293917911560334"	"25"	"0.0002277"	"0.001218"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"652.90295"	"1304.79863"	"1304.79784"	"0.60"	"0.00039"	"6/54"	"6"	"54"	"46997877.2646484"	"HCD"	"MS2"	"0.6524819"	"770.5"	"24.627"	"54.8819"	"16813"	"16813"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"637.5"	""	"581.3"	""	"557.3"	""	"2181.6"	""	"1495.9"	"1882.1"	""	"803"	"33"	"36.000"	"29.000"	"0.0183943967515885"	"26"	"0.001686"	"0.02331"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNIPDLK"	"[K].fNIPDLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"652.90308"	"1304.79888"	"1304.79784"	"0.79"	"0.00052"	"12/58"	"12"	"58"	"4399070.37298584"	"HCD"	"MS2"	"19.06135"	"328.5"	"100.000"	"56.5532"	"17496"	"17496"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"454.8"	""	"392.8"	""	"459.6"	""	"587.8"	""	"595.8"	"629.4"	""	"788"	"34"	"35.000"	"28.000"	"0.014305275357942"	"26"	"0.0006037"	"0.00372"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"652.90308"	"1304.79888"	"1304.79784"	"0.79"	"0.00052"	"6/54"	"6"	"54"	"16554181.9452515"	"HCD"	"MS2"	"2.704604"	"1073.7"	"100.000"	"54.5828"	"16690"	"16690"	"16672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"983.2"	""	"883.1"	""	"779.6"	""	"3094.8"	""	"2061.0"	"2406.2"	""	"788"	"31"	"35.000"	"28.000"	"0.0336896284876565"	"24"	"0.0006037"	"0.005675"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"652.90326"	"1304.79924"	"1304.79784"	"1.07"	"0.00070"	"6/54"	"6"	"54"	"2249823.27539063"	"HCD"	"MS2"	"0"	"175.0"	"100.000"	"54.4443"	"16687"	"16687"	"16667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.2"	""	"164.7"	""	"142.0"	""	"470.7"	""	"337.7"	"372.4"	""	"806"	"31"	"36.000"	"29.000"	"0.029806092584847"	"24"	"0.0003839"	"0.00177"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNFLK"	"[K].dLPNFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"652.90332"	"1304.79936"	"1304.79784"	"1.16"	"0.00076"	"6/54"	"6"	"54"	"13260325.0593262"	"HCD"	"MS2"	"8.885539"	"893.8"	"100.000"	"54.7342"	"16806"	"16806"	"16789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"825.7"	""	"791.8"	""	"646.3"	""	"2585.8"	""	"1631.2"	"2021.0"	""	"806"	"32"	"36.000"	"29.000"	"0.0234048060261089"	"25"	"0.0007793"	"0.007384"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLFLQK"	"[R].vVLFLQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"652.93793"	"1304.86858"	"1304.87062"	"-1.56"	"-0.00102"	"6/52"	"6"	"52"	"1724145.15014648"	"HCD"	"MS2"	"49.403"	"117.6"	"100.000"	"60.4470"	"19136"	"19136"	"19107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.9"	""	"177.1"	""	"174.0"	""	"186.5"	"1.0"	"200.8"	"229.2"	""	"64"	"32"	"25.000"	"18.000"	"0.00221896257925302"	""	"0.0003839"	"0.002022"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLFLQK"	"[R].vVLFLQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"652.93939"	"1304.87151"	"1304.87062"	"0.68"	"0.00045"	"6/52"	"6"	"52"	"1636028.49505615"	"HCD"	"MS2"	"51.14648"	"118.0"	"100.000"	"60.3228"	"19032"	"19032"	"19001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.2"	""	"168.0"	""	"171.4"	""	"183.2"	""	"211.6"	"243.7"	""	"64"	"32"	"25.000"	"18.000"	"0.0022138591069406"	"18"	"0.0003839"	"0.001732"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLWNGQK"	"[K].tLWnGQk.[L]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"653.38275"	"1305.75823"	"1305.75671"	"1.16"	"0.00076"	"4/54"	"4"	"54"	"9764951.68310547"	"HCD"	"MS2"	"16.50526"	"755.0"	"95.223"	"39.6887"	"10693"	"10693"	"10670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1075.3"	""	"1021.4"	""	"1038.4"	""	"1103.4"	"2.2"	"1424.3"	"1492.5"	""	"859"	"21"	"36.000"	"29.000"	"0.320599741737123"	"25"	"0.00103"	"0.01183"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGLLENVR"	"[R].yLGLLENVR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q62774; Q05096"	"Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus OX=10116 GN=Myo1a PE=2 SV=1; Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"653.38928"	"1305.77129"	"1305.77280"	"-1.16"	"-0.00076"	"7/68"	"7"	"68"	"5243294.42797852"	"HCD"	"MS2"	"35.45552"	"323.2"	"100.000"	"56.8227"	"17606"	"17606"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"422.4"	""	"443.8"	""	"452.6"	""	"474.0"	""	"635.3"	"639.7"	""	"782"	"40"	"35.000"	"28.000"	"0.00434687105367102"	"18"	"0.0001889"	"0.0004308"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGLLENVR"	"[R].yLGLLENVR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q62774; Q05096"	"Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus OX=10116 GN=Myo1a PE=2 SV=1; Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"653.39026"	"1305.77324"	"1305.77280"	"0.34"	"0.00022"	"7/68"	"7"	"68"	"5411567.39605713"	"HCD"	"MS2"	"33.86726"	"339.2"	"100.000"	"57.0279"	"17744"	"17744"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"439.4"	""	"448.4"	""	"495.6"	""	"481.6"	"0.3"	"674.3"	"678.3"	""	"788"	"36"	"35.000"	"28.000"	"0.0101741051511003"	"17"	"0.0001308"	"0.0002739"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSDVATK"	"[R].nLSDVATk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"653.39227"	"1305.77727"	"1305.77784"	"-0.43"	"-0.00028"	"14/78"	"14"	"78"	"1138317.61785889"	"HCD"	"MS2"	"0"	"110.9"	"100.000"	"34.5058"	"8566"	"8566"	"8538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.3"	""	"162.0"	""	"151.0"	""	"157.3"	""	"215.0"	"211.4"	""	"732"	"53"	"35.000"	"28.000"	"0.000185558599228541"	""	"0"	"0.0001411"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSMVGQVK"	"[R].vSMVGQVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT2"	"Protein phosphatase methylesterase 1 OS=Rattus norvegicus OX=10116 GN=Ppme1 PE=1 SV=2"	"Q4FZT2"	"Protein phosphatase methylesterase 1 OS=Rattus norvegicus OX=10116 GN=Ppme1 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"653.40106"	"1305.79485"	"1305.79646"	"-1.24"	"-0.00081"	"12/60"	"12"	"60"	"1586513.51928711"	"HCD"	"MS2"	"7.339375"	"154.8"	"100.000"	"36.9916"	"9543"	"9543"	"9514"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.9"	""	"230.5"	""	"245.4"	""	"179.4"	"1.4"	"282.1"	"295.5"	""	"650"	"34"	"35.000"	"28.000"	"0.0136421669797077"	"21"	"0.0001889"	"0.0004693"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFGPAVVMNR"	"[R].sFGPAVVMNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P47864"	"Aquaporin-5 OS=Rattus norvegicus OX=10116 GN=Aqp5 PE=2 SV=1"	"P47864"	"Aquaporin-5 OS=Rattus norvegicus OX=10116 GN=Aqp5 PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"653.86108"	"1306.71489"	"1306.71391"	"0.75"	"0.00049"	"8/74"	"8"	"74"	"11058190.519043"	"HCD"	"MS2"	"31.80414"	"740.4"	"100.000"	"40.1725"	"10889"	"10889"	"10861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1252.2"	""	"1311.5"	""	"1331.0"	""	"734.0"	"4.5"	"1077.5"	"1280.1"	""	"836"	"14"	"36.000"	"29.000"	"1.61501396408601"	"19"	"0.000523"	"0.002837"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEWLDGK"	"[K].tEWLDGk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"653.87195"	"1306.73662"	"1306.74072"	"-3.14"	"-0.00205"	"6/56"	"6"	"56"	"25753528.2806396"	"HCD"	"MS2"	"3.580811"	"1018.5"	"52.633"	"42.4367"	"11813"	"11813"	"11795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1450.9"	""	"1234.6"	""	"1306.3"	""	"1586.6"	""	"1969.1"	"2116.1"	""	"906"	"32"	"36.000"	"29.000"	"0.0265520588524855"	"26"	"0.00103"	"0.01305"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEWLDGK"	"[K].tEWLDGk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"653.87421"	"1306.74114"	"1306.74072"	"0.32"	"0.00021"	"6/56"	"6"	"56"	"22758190.1605225"	"HCD"	"MS2"	"1.756759"	"1497.8"	"80.718"	"42.2098"	"11677"	"11677"	"11660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2101.0"	""	"1787.2"	""	"1912.0"	""	"2423.7"	""	"2927.4"	"3066.9"	""	"857"	"31"	"36.000"	"29.000"	"0.0349100785702929"	"25"	"0.0008453"	"0.008178"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPLVADLFR"	"[K].fPLVADLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70569"	"Unconventional myosin-Vb OS=Rattus norvegicus OX=10116 GN=Myo5b PE=1 SV=1"	"P70569"	"Unconventional myosin-Vb OS=Rattus norvegicus OX=10116 GN=Myo5b PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"653.89038"	"1306.77349"	"1306.77207"	"1.08"	"0.00071"	"4/64"	"4"	"64"	"410460.780456543"	"HCD"	"MS2"	"28.21334"	"24.1"	"100.000"	"83.0259"	"28279"	"28279"	"28256"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.0"	""	"31.1"	""	"41.9"	""	"33.1"	"0.7"	"46.0"	"44.1"	""	"681"	"7"	"35.000"	"28.000"	"6.87253746833572"	"15"	"0.003788"	"0.08816"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIMLATGK"	"[R].dIMLATGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"653.89270"	"1306.77812"	"1306.78048"	"-1.80"	"-0.00118"	"7/66"	"7"	"66"	"8291289.78015137"	"HCD"	"MS2"	"0"	"627.9"	"100.000"	"41.9026"	"11553"	"11553"	"11528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1109.4"	""	"870.0"	""	"1021.2"	""	"703.0"	""	"968.5"	"1268.2"	""	"661"	"38"	"35.000"	"28.000"	"0.00521400524635634"	"26"	"0.0002277"	"0.001334"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALDMLTK"	"[K].gALDMLTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"653.89355"	"1306.77983"	"1306.78048"	"-0.49"	"-0.00032"	"14/62"	"14"	"62"	"4901715.3805542"	"HCD"	"MS2"	"23.25336"	"423.8"	"100.000"	"47.8211"	"13956"	"13956"	"13928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"692.9"	""	"658.2"	""	"673.1"	""	"451.4"	"1.2"	"739.3"	"794.7"	""	"678"	"51"	"35.000"	"28.000"	"0.000289867615667908"	"22"	"0.0001889"	"0.0005203"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALDMLTK"	"[K].gALDMLTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"653.89380"	"1306.78032"	"1306.78048"	"-0.12"	"-0.00008"	"7/62"	"7"	"62"	"4009625.59509277"	"HCD"	"MS2"	"0"	"359.7"	"100.000"	"48.1419"	"14135"	"14135"	"14114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"591.2"	""	"548.6"	""	"559.1"	""	"397.3"	"7.8"	"614.0"	"685.6"	""	"667"	"47"	"35.000"	"28.000"	"0.000623872493811994"	"21"	"0.0001889"	"0.0005599"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTWLK"	"[K].gFPTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"653.89960"	"1306.79192"	"1306.79236"	"-0.34"	"-0.00022"	"6/48"	"6"	"48"	"9884044.02008057"	"HCD"	"MS2"	"5.911436"	"678.3"	"100.000"	"57.7955"	"18057"	"18057"	"18037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"976.5"	""	"884.7"	""	"927.7"	""	"1189.6"	""	"1154.7"	"1292.8"	""	"564"	"31"	"34.000"	"27.000"	"0.0226073213875325"	"23"	"0.0008125"	"0.007617"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTWLK"	"[K].gFPTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"653.89978"	"1306.79228"	"1306.79236"	"-0.06"	"-0.00004"	"6/48"	"6"	"48"	"7446835.22711182"	"HCD"	"MS2"	"0.9258072"	"470.6"	"81.204"	"57.8977"	"18045"	"18045"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"629.3"	""	"569.2"	""	"633.1"	""	"822.8"	""	"862.3"	"949.9"	""	"566"	"32"	"34.000"	"27.000"	"0.0162101276768989"	"24"	"0.0008125"	"0.007722"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTWLK"	"[K].gFPTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"653.89984"	"1306.79241"	"1306.79236"	"0.03"	"0.00002"	"6/48"	"6"	"48"	"6568893.82427979"	"HCD"	"MS2"	"2.749073"	"496.0"	"100.000"	"58.0993"	"18182"	"18182"	"18165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"651.0"	""	"636.7"	""	"672.9"	""	"840.8"	""	"905.6"	"997.8"	""	"566"	"32"	"34.000"	"27.000"	"0.0163224909140007"	"24"	"0.000523"	"0.003226"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTWLK"	"[K].gFPTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"653.90033"	"1306.79338"	"1306.79236"	"0.78"	"0.00051"	"6/48"	"6"	"48"	"9714778.50561523"	"HCD"	"MS2"	"19.32031"	"673.1"	"100.000"	"57.6077"	"17927"	"17927"	"17899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"936.0"	""	"903.2"	""	"898.2"	""	"1218.0"	"0.6"	"1160.8"	"1258.1"	""	"561"	"31"	"34.000"	"27.000"	"0.0217737316214348"	"23"	"0.0007793"	"0.007389"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIDIAAAK"	"[K].fIDIAAAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"653.91046"	"1306.81365"	"1306.81349"	"0.12"	"0.00008"	"7/56"	"7"	"56"	"3153028.19348145"	"HCD"	"MS2"	"31.45897"	"243.5"	"100.000"	"52.4507"	"15890"	"15890"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"354.7"	""	"325.6"	""	"332.3"	""	"429.8"	"1.4"	"415.9"	"445.7"	""	"362"	"42"	"32.000"	"25.000"	"0.00114994898665166"	""	"0.0001889"	"0.0003915"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVLAAYWR"	"[R].eAVLAAYWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"654.36945"	"1307.73161"	"1307.73094"	"0.52"	"0.00034"	"7/64"	"7"	"64"	"8285594.69488525"	"HCD"	"MS2"	"32.31211"	"420.1"	"100.000"	"52.3581"	"15802"	"15802"	"15778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"712.0"	""	"610.7"	""	"669.7"	""	"683.6"	""	"567.9"	"725.6"	""	"898"	"39"	"36.000"	"29.000"	"0.0052631571913111"	"21"	"0.0001889"	"0.000435"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVLAAYWR"	"[R].eAVLAAYWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"654.36969"	"1307.73210"	"1307.73094"	"0.89"	"0.00058"	"7/64"	"7"	"64"	"8327720.40405273"	"HCD"	"MS2"	"31.2855"	"412.8"	"100.000"	"52.5564"	"15933"	"15933"	"15910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"687.6"	""	"591.9"	""	"642.9"	""	"674.7"	"2.5"	"588.9"	"710.3"	""	"898"	"39"	"36.000"	"29.000"	"0.00536100658904459"	"21"	"0.0001889"	"0.0004717"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GATPYGGVK"	"[R].gATPYGGVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"654.38940"	"1307.77153"	"1307.77236"	"-0.63"	"-0.00041"	"12/64"	"12"	"64"	"1312500.48443604"	"HCD"	"MS2"	"0"	"111.7"	"100.000"	"31.1420"	"7199"	"7199"	"7168"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.9"	""	"135.9"	""	"134.9"	""	"170.0"	""	"226.7"	"238.6"	""	"664"	"48"	"35.000"	"28.000"	"0.000532277469709094"	"23"	"0.0001889"	"0.0006967"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVYPTEK"	"[K].iVYPTEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"654.40234"	"1307.79741"	"1307.79751"	"-0.08"	"-0.00005"	"5/50"	"5"	"50"	"9139654.03851318"	"HCD"	"MS2"	"0"	"590.3"	"88.518"	"38.0983"	"10040"	"10040"	"10017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"795.7"	""	"812.5"	""	"837.4"	""	"953.1"	""	"1107.6"	"1090.4"	""	"490"	"20"	"33.000"	"26.000"	"0.231828104534619"	"17"	"0.001217"	"0.01792"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVYPTEK"	"[K].iVYPTEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"654.40289"	"1307.79851"	"1307.79751"	"0.76"	"0.00050"	"4/50"	"4"	"50"	"10331219.0405273"	"HCD"	"MS2"	"7.796417"	"686.7"	"100.000"	"37.9637"	"9942"	"9942"	"9911"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"972.2"	""	"950.8"	""	"930.2"	""	"1093.5"	""	"1326.8"	"1239.3"	""	"463"	"24"	"33.000"	"26.000"	"0.0932289934463438"	"20"	"0.001286"	"0.01897"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLIEIAK"	"[R].yLIEIAk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"654.41986"	"1307.83245"	"1307.83390"	"-1.11"	"-0.00073"	"12/48"	"12"	"48"	"14400831.8273926"	"HCD"	"MS2"	"18.24078"	"832.9"	"81.525"	"52.8623"	"16008"	"16008"	"15986"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1215.0"	""	"1356.7"	""	"1308.9"	""	"1132.4"	"17.7"	"1375.4"	"1473.4"	""	"263"	"36"	"31.000"	"24.000"	"0.00345880240934243"	"19"	"0.002361"	"0.03507"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFILSLK"	"[R].eFILSLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"654.42010"	"1307.83293"	"1307.83390"	"-0.74"	"-0.00048"	"6/56"	"6"	"56"	"2643380.71832275"	"HCD"	"MS2"	"11.63532"	"205.0"	"100.000"	"61.1712"	"19431"	"19431"	"19411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"302.5"	""	"300.6"	""	"322.4"	""	"317.8"	""	"343.8"	"354.0"	""	"263"	"35"	"31.000"	"24.000"	"0.00414883107973764"	"21"	"0.000494"	"0.002751"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLIEIAK"	"[R].yLIEIAk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"654.42023"	"1307.83318"	"1307.83390"	"-0.55"	"-0.00036"	"12/48"	"12"	"48"	"14450551.1616211"	"HCD"	"MS2"	"23.42731"	"868.8"	"84.113"	"53.0630"	"16140"	"16140"	"16118"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1285.9"	""	"1378.6"	""	"1391.4"	""	"1181.3"	"13.3"	"1402.1"	"1564.8"	""	"263"	"36"	"31.000"	"24.000"	"0.00365532294710347"	"19"	"0.002456"	"0.03649"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFILSLK"	"[R].eFILSLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"654.42078"	"1307.83428"	"1307.83390"	"0.29"	"0.00019"	"5/56"	"5"	"56"	"2699314.67370605"	"HCD"	"MS2"	"7.564475"	"217.3"	"100.000"	"61.0489"	"19328"	"19328"	"19305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"329.6"	""	"312.0"	""	"335.0"	""	"336.8"	""	"358.8"	"387.1"	""	"261"	"33"	"31.000"	"24.000"	"0.00648052979492689"	"21"	"0.0004166"	"0.00242"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLILPEK"	"[R].hLILPEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"436.61938"	"1307.84360"	"1307.84513"	"-1.17"	"-0.00051"	"7/48"	"7"	"48"	"4217985.47674561"	"HCD"	"MS2"	"70.86529"	"251.7"	"100.000"	"36.3770"	"9334"	"9334"	"9305"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"315.1"	""	"303.3"	""	"336.6"	""	"408.3"	"2.2"	"483.3"	"539.5"	""	"170"	"18"	"29.000"	"22.000"	"0.130142434242973"	"14"	"0.0008453"	"0.007959"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLFIDGDR"	"[R].iMLFIDGDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"654.86212"	"1308.71697"	"1308.71832"	"-1.04"	"-0.00068"	"6/68"	"6"	"68"	"1530701.93377686"	"HCD"	"MS2"	"9.772849"	"99.3"	"100.000"	"65.4974"	"21198"	"21198"	"21171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.3"	""	"133.3"	""	"152.8"	""	"135.8"	"8.8"	"190.3"	"180.2"	""	"856"	"32"	"36.000"	"29.000"	"0.0295422636043624"	"24"	"0.0001889"	"0.0004779"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"654.86487"	"1308.72246"	"1308.72336"	"-0.69"	"-0.00045"	"8/62"	"8"	"62"	"606790.16583252"	"HCD"	"MS2"	"0"	"52.8"	"100.000"	"31.7891"	"7464"	"7464"	"7434"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.1"	""	"58.8"	""	"71.5"	""	"90.8"	""	"104.8"	"98.0"	""	"878"	"19"	"36.000"	"29.000"	"0.618677782507202"	"18"	"0.007565"	"0.2948"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"654.86487"	"1308.72246"	"1308.72336"	"-0.69"	"-0.00045"	"8/62"	"8"	"62"	"721016.044006348"	"HCD"	"MS2"	"0"	"65.0"	"100.000"	"31.6494"	"7365"	"7365"	"7334"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.5"	""	"80.0"	""	"85.1"	""	"120.7"	""	"116.0"	"123.7"	""	"878"	"18"	"36.000"	"29.000"	"0.653829513115092"	"19"	"0.002199"	"0.03282"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLLDATFR"	"[K].lMLLDATFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"654.88013"	"1308.75298"	"1308.75471"	"-1.32"	"-0.00087"	"7/68"	"7"	"68"	"1914374.79699707"	"HCD"	"MS2"	"0"	"98.1"	"100.000"	"67.9118"	"22174"	"22174"	"22154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.6"	""	"159.9"	""	"184.8"	""	"121.6"	""	"155.8"	"164.5"	""	"711"	"45"	"35.000"	"28.000"	"0.00116906754776412"	"23"	"0.0001308"	"0.0002065"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLLDATFR"	"[K].lMLLDATFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"654.88068"	"1308.75408"	"1308.75471"	"-0.48"	"-0.00032"	"7/68"	"7"	"68"	"1866127.72979736"	"HCD"	"MS2"	"9.019471"	"95.5"	"100.000"	"68.0075"	"22162"	"22162"	"22138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.6"	""	"163.1"	""	"169.6"	""	"116.9"	""	"163.6"	"167.5"	""	"701"	"40"	"35.000"	"28.000"	"0.00352117834492578"	"21"	"0.0001308"	"0.0002192"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIDNTK"	"[K].fIIDNTk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"654.89868"	"1308.79009"	"1308.79276"	"-2.04"	"-0.00134"	"9/56"	"9"	"56"	"3042874.32470703"	"HCD"	"MS2"	"100"	"306.3"	"100.000"	"42.8843"	"11952"	"11952"	"11939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"352.1"	""	"376.7"	""	"411.1"	""	"508.7"	""	"625.6"	"638.5"	""	"460"	"20"	"33.000"	"26.000"	"0.238631535638143"	"21"	"0.0008453"	"0.008027"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIDNTK"	"[K].fIIDNTk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"654.89899"	"1308.79070"	"1308.79276"	"-1.58"	"-0.00103"	"6/56"	"6"	"56"	"2565097.40435791"	"HCD"	"MS2"	"0"	"260.0"	"100.000"	"43.1727"	"12115"	"12115"	"12091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"328.1"	""	"322.0"	""	"342.1"	""	"426.7"	""	"523.7"	"527.4"	""	"460"	"31"	"33.000"	"26.000"	"0.016320288663158"	"25"	"0.0004166"	"0.002214"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVQDTLK"	"[K].fVQDTLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"654.89905"	"1308.79082"	"1308.79276"	"-1.48"	"-0.00097"	"6/58"	"6"	"58"	"3788908.14044189"	"HCD"	"MS2"	"47.80251"	"320.4"	"100.000"	"40.8803"	"11135"	"11135"	"11109"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"421.4"	""	"392.5"	""	"409.9"	""	"546.0"	""	"615.6"	"657.8"	""	"460"	"20"	"33.000"	"26.000"	"0.24644944020465"	"22"	"0.00175"	"0.02392"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDFGLTK"	"[K].iGDFGLTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62689"	"Tyrosine-protein kinase JAK2 OS=Rattus norvegicus OX=10116 GN=Jak2 PE=1 SV=1"	"Q62689"	"Tyrosine-protein kinase JAK2 OS=Rattus norvegicus OX=10116 GN=Jak2 PE=1 SV=1"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"654.89954"	"1308.79180"	"1308.79276"	"-0.74"	"-0.00048"	"5/64"	"5"	"64"	"2687400.14575195"	"HCD"	"MS2"	"57.33094"	"226.8"	"100.000"	"51.2214"	"15387"	"15387"	"15366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"299.2"	""	"266.3"	""	"296.1"	""	"343.5"	"7.1"	"419.2"	"520.5"	""	"459"	"33"	"33.000"	"26.000"	"0.0104179601021222"	""	"0.0002277"	"0.00113"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFEQTK"	"[K].vVFEQTk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"654.89984"	"1308.79241"	"1308.79276"	"-0.27"	"-0.00018"	"12/56"	"12"	"56"	"9687387.81835938"	"HCD"	"MS2"	"3.08367"	"749.3"	"100.000"	"37.3607"	"9694"	"9694"	"9672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1132.2"	""	"922.3"	""	"1039.7"	""	"1149.5"	""	"1263.9"	"1590.6"	""	"444"	"39"	"33.000"	"26.000"	"0.00313583334906252"	"26"	"0.0008731"	"0.009111"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFEQTK"	"[K].vVFEQTk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"654.89996"	"1308.79265"	"1308.79276"	"-0.08"	"-0.00005"	"12/56"	"12"	"56"	"10135385.0775757"	"HCD"	"MS2"	"0"	"773.1"	"100.000"	"37.4540"	"9776"	"9776"	"9745"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1166.6"	""	"948.9"	""	"1106.5"	""	"1194.2"	""	"1296.5"	"1611.1"	""	"444"	"39"	"33.000"	"26.000"	"0.00311424642412755"	"26"	"0.0006037"	"0.004192"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDFGLTK"	"[K].iGDFGLTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62689"	"Tyrosine-protein kinase JAK2 OS=Rattus norvegicus OX=10116 GN=Jak2 PE=1 SV=1"	"Q62689"	"Tyrosine-protein kinase JAK2 OS=Rattus norvegicus OX=10116 GN=Jak2 PE=1 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"654.90002"	"1308.79277"	"1308.79276"	"0.01"	"0.00001"	"9/64"	"9"	"64"	"2485912.3269043"	"HCD"	"MS2"	"51.49059"	"203.7"	"100.000"	"51.0371"	"15262"	"15262"	"15234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.1"	""	"257.2"	""	"262.0"	""	"330.9"	"0.2"	"347.9"	"467.0"	""	"444"	"25"	"33.000"	"26.000"	"0.0755706181136222"	""	"0.0001889"	"0.001111"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVQDTLK"	"[K].fVQDTLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"654.90009"	"1308.79289"	"1308.79276"	"0.10"	"0.00007"	"6/58"	"6"	"58"	"4533500.58026123"	"HCD"	"MS2"	"51.38454"	"348.1"	"100.000"	"41.0314"	"11241"	"11241"	"11213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"428.0"	""	"394.4"	""	"469.3"	""	"627.1"	""	"647.5"	"738.4"	""	"444"	"20"	"33.000"	"26.000"	"0.228745718738039"	""	"0.00103"	"0.01242"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISFENLK"	"[K].iSFENLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"654.90057"	"1308.79387"	"1308.79276"	"0.85"	"0.00056"	"10/56"	"10"	"56"	"5789603.13098145"	"HCD"	"MS2"	"54.4748"	"385.2"	"100.000"	"49.3918"	"14646"	"14646"	"14622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"604.7"	""	"504.2"	""	"547.0"	""	"614.3"	"3.6"	"660.8"	"711.9"	""	"419"	"13"	"33.000"	"26.000"	"1.01902309592361"	"18"	"0.00103"	"0.01176"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIWGPHK"	"[K].lIWGPHk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"3"	"3"	"0.3529"	"0.0000"	"1"	"1"	"1"	"436.94437"	"1308.81855"	"1308.81925"	"-0.54"	"-0.00023"	"7/50"	"7"	"50"	"14055180.2841797"	"HCD"	"MS2"	"33.53264"	"474.8"	"73.233"	"39.4533"	"10553"	"10553"	"10534"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"580.2"	""	"612.2"	""	"645.5"	""	"931.0"	"4.7"	"876.2"	"849.7"	""	"373"	"17"	"32.000"	"25.000"	"0.40990086627437"	"25"	"0.0003839"	"0.001834"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALHLVGLK"	"[K].aLHLVGLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.3590"	"0.0000"	"1"	"1"	"1"	"436.96332"	"1308.87540"	"1308.87676"	"-1.04"	"-0.00045"	"12/58"	"12"	"58"	"36109716.164917"	"HCD"	"MS2"	"9.917901"	"618.5"	"46.760"	"40.9718"	"11216"	"11216"	"11197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"832.1"	""	"691.0"	""	"911.6"	""	"1082.2"	""	"1053.7"	"1303.5"	""	"29"	"39"	"21.000"	"14.000"	"0.000197864554805394"	""	"0.0004166"	"0.002504"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALHLVGLK"	"[K].aLHLVGLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.4571"	"0.0000"	"1"	"1"	"1"	"436.96365"	"1308.87641"	"1308.87676"	"-0.27"	"-0.00012"	"12/58"	"12"	"58"	"30905336.4039307"	"HCD"	"MS2"	"7.104539"	"765.7"	"69.391"	"40.7839"	"11095"	"11095"	"11077"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1018.3"	""	"871.2"	""	"1140.4"	""	"1352.5"	"4.6"	"1256.8"	"1609.7"	""	"30"	"35"	"21.000"	"14.000"	"0.000509437908885613"	""	"0.0003839"	"0.002057"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPPLVIK"	"[R].lAPPLVIk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"654.95331"	"1308.89934"	"1308.90192"	"-1.97"	"-0.00129"	"7/58"	"7"	"58"	"4766071.14428711"	"HCD"	"MS2"	"0"	"281.9"	"100.000"	"53.1166"	"16111"	"16111"	"16090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"346.7"	""	"344.2"	""	"387.1"	""	"462.5"	"3.7"	"547.6"	"583.2"	""	"17"	"42"	"19.000"	"13.000"	"5.57723476357469E-05"	""	"0.002829"	"0.04847"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFFLQPGER"	"[K].sFFLQPGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.35834"	"1309.70940"	"1309.71020"	"-0.61"	"-0.00040"	"4/86"	"4"	"86"	"4387730.99890137"	"HCD"	"MS2"	"100"	"334.5"	"100.000"	"43.4085"	"12207"	"12207"	"12192"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"507.5"	""	"484.4"	""	"505.8"	""	"536.0"	""	"551.2"	"582.7"	""	"780"	"9"	"35.000"	"28.000"	"5.28523870816904"	"13"	"0.003137"	"0.0629"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFFLQPGER"	"[K].sFFLQPGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"655.35858"	"1309.70989"	"1309.71020"	"-0.24"	"-0.00016"	"5/86"	"5"	"86"	"5350545.80529785"	"HCD"	"MS2"	"0"	"372.7"	"100.000"	"43.1972"	"12072"	"12072"	"12058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"562.5"	""	"558.0"	""	"535.1"	""	"618.0"	"4.0"	"620.0"	"628.1"	""	"755"	"18"	"35.000"	"28.000"	"0.619322639382826"	"18"	"0.002981"	"0.05702"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALSSFQK"	"[K].aALSSFQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"655.39691"	"1309.78655"	"1309.78801"	"-1.12"	"-0.00073"	"7/60"	"7"	"60"	"3321329.57824707"	"HCD"	"MS2"	"36.28592"	"294.9"	"100.000"	"38.1840"	"10032"	"10032"	"10007"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"386.8"	""	"366.9"	""	"388.3"	""	"540.6"	"0.2"	"563.9"	"549.5"	""	"468"	"30"	"33.000"	"26.000"	"0.0222954302381534"	"18"	"0.0001889"	"0.0008748"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLFGGSVK"	"[K].gSLFGGSVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"655.39722"	"1309.78716"	"1309.78801"	"-0.65"	"-0.00043"	"7/74"	"7"	"74"	"11946142.9841919"	"HCD"	"MS2"	"8.846144"	"846.2"	"95.775"	"40.6235"	"11030"	"11030"	"11013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1186.1"	""	"1162.3"	""	"1248.4"	""	"1304.5"	""	"1514.9"	"1602.2"	""	"474"	"46"	"33.000"	"26.000"	"0.000613406460891283"	"21"	"0.0001308"	"0.0002859"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLFGGSVK"	"[K].gSLFGGSVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"655.39789"	"1309.78850"	"1309.78801"	"0.38"	"0.00025"	"7/74"	"7"	"74"	"7531605.33288574"	"HCD"	"MS2"	"6.405398"	"598.8"	"100.000"	"40.8575"	"11169"	"11169"	"11149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"860.2"	""	"824.0"	""	"883.9"	""	"858.7"	""	"1086.9"	"1163.5"	""	"456"	"45"	"33.000"	"26.000"	"0.000671328132506116"	"18"	"0.0001308"	"0.0002937"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMPHLK"	"[R].lPmPHLk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"437.27332"	"1309.80539"	"1309.80664"	"-0.95"	"-0.00041"	"8/50"	"8"	"50"	"9285311.1506958"	"HCD"	"MS2"	"31.37084"	"389.5"	"96.409"	"35.2765"	"8839"	"8839"	"8811"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"539.8"	""	"503.8"	""	"648.5"	""	"646.0"	"4.5"	"659.8"	"683.0"	""	"307"	"14"	"31.000"	"24.000"	"0.671596431417917"	"17"	"0.003507"	"0.07887"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMPHLK"	"[R].lPmPHLk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"437.27359"	"1309.80622"	"1309.80664"	"-0.32"	"-0.00014"	"4/50"	"4"	"50"	"8014431.41479492"	"HCD"	"MS2"	"35.47559"	"366.5"	"100.000"	"35.6230"	"9024"	"9024"	"9001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"464.6"	""	"440.7"	""	"535.8"	""	"620.2"	"1.0"	"703.3"	"709.6"	""	"307"	"21"	"31.000"	"24.000"	"0.135552764714249"	"17"	"0.005478"	"0.1749"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPAPAVVK"	"[K].vAPAPAVVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.43219"	"1309.85710"	"1309.86078"	"-2.81"	"-0.00184"	"8/66"	"8"	"66"	"3661577.22387695"	"HCD"	"MS2"	"0"	"248.8"	"100.000"	"35.8660"	"9081"	"9081"	"9051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.1"	""	"334.0"	""	"397.2"	""	"396.3"	"4.8"	"432.4"	"419.8"	""	"80"	"46"	"26.000"	"19.000"	"9.68411618694472E-05"	"15"	"0.0001308"	"0.0002682"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIELHK"	"[K].vLIELHk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"3"	"3"	"0.4762"	"0.0000"	"1"	"1"	"1"	"437.29065"	"1309.85739"	"1309.86078"	"-2.58"	"-0.00113"	"4/48"	"4"	"48"	"10720068.4354858"	"HCD"	"MS2"	"46.64799"	"320.9"	"100.000"	"41.0408"	"11201"	"11201"	"11173"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.6"	""	"452.7"	""	"488.9"	""	"529.8"	"5.0"	"534.6"	"596.6"	""	"80"	"21"	"26.000"	"19.000"	"0.030273315800839"	""	"0.003914"	"0.09915"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPAPAVVK"	"[K].vAPAPAVVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.43274"	"1309.85820"	"1309.86078"	"-1.97"	"-0.00129"	"7/66"	"7"	"66"	"4454318.80053711"	"HCD"	"MS2"	"13.74745"	"262.7"	"100.000"	"35.8751"	"9128"	"9128"	"9097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"358.8"	""	"356.7"	""	"371.7"	""	"464.3"	"2.7"	"492.3"	"441.8"	""	"79"	"44"	"25.000"	"18.000"	"0.000167338971589569"	"15"	"0.0001889"	"0.0004178"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQTVHFFR"	"[R].fQTVHFFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"3"	"3"	"0.3571"	"0.0000"	"1"	"1"	"1"	"437.57764"	"1310.71836"	"1310.72071"	"-1.79"	"-0.00078"	"6/68"	"6"	"68"	"13381315.43396"	"HCD"	"MS2"	"11.297"	"121.6"	"36.032"	"41.1601"	"11250"	"11250"	"11221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.5"	""	"168.2"	""	"181.5"	""	"198.7"	"6.6"	"214.2"	"212.5"	""	"786"	"28"	"35.000"	"28.000"	"0.056026378428566"	""	"0.0006396"	"0.006314"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQTVHFFR"	"[R].fQTVHFFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"3"	"3"	"0.2963"	"0.0000"	"1"	"1"	"1"	"437.57803"	"1310.71955"	"1310.72071"	"-0.89"	"-0.00039"	"7/68"	"7"	"68"	"17339112.6437378"	"HCD"	"MS2"	"21.33233"	"343.6"	"100.000"	"41.2976"	"11350"	"11350"	"11325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"468.2"	"8.3"	"491.1"	""	"515.2"	""	"581.8"	"8.5"	"574.3"	"604.8"	""	"811"	"27"	"36.000"	"29.000"	"0.0796142592257017"	""	"0.0002277"	"0.001228"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITFQESK"	"[K].iTFQESk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"655.88885"	"1310.77043"	"1310.77202"	"-1.21"	"-0.00079"	"5/62"	"5"	"62"	"3295548.71435547"	"HCD"	"MS2"	"32.40726"	"345.3"	"100.000"	"37.5602"	"9776"	"9776"	"9752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"405.1"	""	"367.9"	""	"398.1"	""	"841.1"	""	"630.7"	"631.6"	""	"558"	"26"	"34.000"	"27.000"	"0.070405113552208"	""	"0.0006037"	"0.006138"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATFDAISK"	"[K].aTFDAISk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"655.88885"	"1310.77043"	"1310.77202"	"-1.21"	"-0.00079"	"12/66"	"12"	"66"	"9077837.49554443"	"HCD"	"MS2"	"41.1874"	"509.8"	"66.485"	"39.6505"	"10634"	"10634"	"10614"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"754.6"	""	"692.9"	""	"763.3"	""	"807.7"	""	"928.3"	"883.9"	""	"558"	"34"	"34.000"	"27.000"	"0.0106317364726863"	"25"	"0.0001889"	"0.0009061"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATFDAISK"	"[K].aTFDAISk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"655.88898"	"1310.77068"	"1310.77202"	"-1.03"	"-0.00067"	"12/66"	"12"	"66"	"8335150.42120361"	"HCD"	"MS2"	"15.32174"	"611.1"	"87.689"	"39.7677"	"10725"	"10725"	"10702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"922.1"	""	"833.6"	""	"929.6"	""	"957.3"	""	"1065.2"	"1079.8"	""	"561"	"34"	"34.000"	"27.000"	"0.0107135367970633"	"25"	"0.0001889"	"0.001023"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITFQESK"	"[K].iTFQESk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"655.88910"	"1310.77092"	"1310.77202"	"-0.84"	"-0.00055"	"5/62"	"5"	"62"	"4791379.68804932"	"HCD"	"MS2"	"41.12467"	"460.1"	"100.000"	"37.6303"	"9848"	"9848"	"9825"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"516.7"	""	"500.7"	""	"544.2"	""	"1144.2"	"0.1"	"830.6"	"825.6"	""	"561"	"26"	"34.000"	"27.000"	"0.0722658084539223"	""	"0.0006037"	"0.004209"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVQPSWLR"	"[R].vPVQPSWLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97541"	"Heat shock protein beta-6 OS=Rattus norvegicus OX=10116 GN=Hspb6 PE=1 SV=1"	"P97541"	"Heat shock protein beta-6 OS=Rattus norvegicus OX=10116 GN=Hspb6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.89288"	"1310.77849"	"1310.77822"	"0.20"	"0.00013"	"9/74"	"9"	"74"	"3286709.75683594"	"HCD"	"MS2"	"35.40665"	"168.9"	"100.000"	"48.6521"	"14296"	"14296"	"14271"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.8"	""	"221.8"	""	"223.3"	""	"256.6"	"7.7"	"279.8"	"400.3"	""	"490"	"20"	"33.000"	"26.000"	"0.233973183575252"	"14"	"0.0001889"	"0.0005045"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVQPSWLR"	"[R].vPVQPSWLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P97541"	"Heat shock protein beta-6 OS=Rattus norvegicus OX=10116 GN=Hspb6 PE=1 SV=1"	"P97541"	"Heat shock protein beta-6 OS=Rattus norvegicus OX=10116 GN=Hspb6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.89319"	"1310.77910"	"1310.77822"	"0.67"	"0.00044"	"9/74"	"9"	"74"	"3363488.94891357"	"HCD"	"MS2"	"31.86229"	"163.1"	"100.000"	"48.9338"	"14459"	"14459"	"14431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"200.2"	""	"197.6"	""	"235.5"	""	"240.3"	"9.6"	"295.1"	"369.0"	""	"489"	"20"	"33.000"	"26.000"	"0.222473795158585"	"14"	"0.0001889"	"0.0006419"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.5185"	"0.0000"	"1"	"1"	"1"	"437.59988"	"1310.78510"	"1310.78728"	"-1.66"	"-0.00073"	"5/50"	"5"	"50"	"4277648.93133545"	"HCD"	"MS2"	"0"	"183.6"	"100.000"	"54.3597"	"16599"	"16599"	"16577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.4"	""	"237.2"	""	"226.1"	""	"315.1"	"2.2"	"353.1"	"370.4"	""	"479"	"27"	"33.000"	"26.000"	"0.053003618295055"	""	"0.006502"	"0.2366"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"655.89697"	"1310.78667"	"1310.78728"	"-0.47"	"-0.00031"	"12/50"	"12"	"50"	"14049264.309021"	"HCD"	"MS2"	"0"	"778.7"	"71.676"	"54.9293"	"16886"	"16886"	"16869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"990.0"	""	"979.2"	""	"1017.1"	""	"1304.4"	"6.6"	"1464.2"	"1625.2"	""	"477"	"35"	"33.000"	"26.000"	"0.00721918852602162"	"21"	"0.001058"	"0.01353"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.5185"	"0.0000"	"1"	"1"	"1"	"437.60043"	"1310.78675"	"1310.78728"	"-0.41"	"-0.00018"	"5/50"	"5"	"50"	"3549371.09735107"	"HCD"	"MS2"	"44.42186"	"153.6"	"100.000"	"54.4925"	"16707"	"16707"	"16680"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.7"	""	"199.2"	""	"199.1"	""	"266.7"	""	"279.7"	"309.7"	""	"477"	"27"	"33.000"	"26.000"	"0.0483602328605826"	""	"0.009019"	"0.4039"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"655.89716"	"1310.78703"	"1310.78728"	"-0.19"	"-0.00012"	"12/50"	"12"	"50"	"3718959.09222412"	"HCD"	"MS2"	"5.362277"	"303.6"	"100.000"	"55.0061"	"16863"	"16863"	"16843"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.5"	""	"374.0"	""	"371.0"	""	"527.6"	"3.5"	"600.3"	"640.0"	""	"478"	"35"	"33.000"	"26.000"	"0.00780544918891883"	"25"	"0.0006037"	"0.004038"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"655.89722"	"1310.78716"	"1310.78728"	"-0.09"	"-0.00006"	"12/50"	"12"	"50"	"3193134.95941162"	"HCD"	"MS2"	"0"	"266.6"	"100.000"	"55.2484"	"17016"	"17016"	"16997"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.3"	""	"350.2"	""	"340.8"	""	"444.1"	"3.6"	"489.6"	"549.7"	""	"478"	"35"	"33.000"	"26.000"	"0.00798726145662414"	"23"	"0.0005564"	"0.003655"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"655.89740"	"1310.78752"	"1310.78728"	"0.19"	"0.00012"	"12/50"	"12"	"50"	"37051265.8166504"	"HCD"	"MS2"	"1.099122"	"1384.1"	"45.901"	"54.3851"	"16610"	"16610"	"16593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1790.3"	""	"1763.4"	""	"1718.4"	""	"2442.9"	""	"2569.2"	"2849.1"	""	"473"	"35"	"33.000"	"26.000"	"0.0073253966426472"	"21"	"0.001557"	"0.02078"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"655.89752"	"1310.78777"	"1310.78728"	"0.37"	"0.00024"	"12/50"	"12"	"50"	"2833965.65789795"	"HCD"	"MS2"	"0"	"229.5"	"100.000"	"54.0844"	"16487"	"16487"	"16461"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.0"	""	"291.1"	""	"280.0"	""	"416.5"	""	"430.4"	"444.2"	""	"473"	"34"	"33.000"	"26.000"	"0.00882736623186878"	"24"	"0.0003839"	"0.00184"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"655.89752"	"1310.78777"	"1310.78728"	"0.37"	"0.00024"	"12/50"	"12"	"50"	"21324304.741394"	"HCD"	"MS2"	"0"	"1026.2"	"57.901"	"54.6957"	"16737"	"16737"	"16720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1278.9"	""	"1288.4"	""	"1288.1"	""	"1687.4"	""	"1972.8"	"2228.0"	""	"473"	"35"	"33.000"	"26.000"	"0.00722488843275469"	"21"	"0.00103"	"0.01239"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.4583"	"0.0000"	"1"	"1"	"1"	"437.60080"	"1310.78785"	"1310.78728"	"0.43"	"0.00019"	"5/50"	"5"	"50"	"5001285.59051514"	"HCD"	"MS2"	"5.63026"	"202.8"	"100.000"	"54.7799"	"16824"	"16824"	"16805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.9"	""	"253.5"	""	"259.6"	""	"342.1"	""	"383.8"	"432.0"	""	"473"	"24"	"33.000"	"26.000"	"0.0858679599531289"	""	"0.008737"	"0.3879"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"655.89789"	"1310.78850"	"1310.78728"	"0.93"	"0.00061"	"12/50"	"12"	"50"	"54785427.9025879"	"HCD"	"MS2"	"0.8354868"	"962.1"	"21.568"	"54.6168"	"16758"	"16758"	"16741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1245.5"	""	"1234.9"	""	"1229.2"	""	"1629.6"	"3.5"	"1778.4"	"2004.0"	""	"480"	"35"	"33.000"	"26.000"	"0.00739965108059844"	"21"	"0.002424"	"0.03569"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSTWLK"	"[K].aFSTWLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"655.89795"	"1310.78862"	"1310.78728"	"1.02"	"0.00067"	"12/50"	"12"	"50"	"4639941.88861084"	"HCD"	"MS2"	"0"	"368.0"	"100.000"	"54.3137"	"16634"	"16634"	"16605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"495.2"	""	"465.0"	""	"465.1"	""	"672.3"	"2.3"	"665.9"	"723.1"	""	"480"	"35"	"33.000"	"26.000"	"0.00818862987892627"	"25"	"0.0006037"	"0.005603"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAIDLPGLGR"	"[R].aVAIDLPGLGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"655.90320"	"1310.79912"	"1310.79935"	"-0.18"	"-0.00012"	"7/80"	"7"	"80"	"2511338.90014648"	"HCD"	"MS2"	"0"	"127.3"	"100.000"	"57.0325"	"17746"	"17746"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.3"	""	"165.0"	""	"188.2"	""	"202.0"	"2.9"	"233.5"	"230.2"	""	"374"	"48"	"32.000"	"25.000"	"0.000275957121722592"	"21"	"0"	"4.072E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAIDLPGLGR"	"[R].aVAIDLPGLGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"655.90332"	"1310.79936"	"1310.79935"	"0.01"	"0.00001"	"7/80"	"7"	"80"	"1996644.46313477"	"HCD"	"MS2"	"0"	"112.2"	"100.000"	"56.8548"	"17619"	"17619"	"17595"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.1"	""	"146.3"	""	"170.2"	""	"178.1"	"1.7"	"194.5"	"210.3"	""	"374"	"48"	"32.000"	"25.000"	"0.000293657844410374"	"21"	"0"	"9.119E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGGLTTK"	"[R].iYGGLTTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"655.90735"	"1310.80742"	"1310.80841"	"-0.75"	"-0.00049"	"6/58"	"6"	"58"	"8814745.84747314"	"HCD"	"MS2"	"0"	"710.9"	"100.000"	"39.5490"	"10636"	"10636"	"10606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1071.0"	""	"1043.2"	""	"1049.5"	""	"1107.0"	"0.2"	"1248.2"	"1208.2"	""	"341"	"33"	"32.000"	"25.000"	"0.00907244582049884"	"22"	"0.0003839"	"0.001908"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGGLTTK"	"[R].iYGGLTTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"655.90765"	"1310.80803"	"1310.80841"	"-0.29"	"-0.00019"	"6/58"	"6"	"58"	"10724760.749939"	"HCD"	"MS2"	"20.86857"	"902.0"	"100.000"	"39.4717"	"10561"	"10561"	"10534"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1363.3"	""	"1295.5"	""	"1301.8"	""	"1395.3"	""	"1556.9"	"1628.1"	""	"336"	"33"	"32.000"	"25.000"	"0.00875607114656535"	"19"	"0.0002277"	"0.00115"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGIFAFK"	"[K].iGGIFAFk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"655.91504"	"1310.82280"	"1310.82366"	"-0.66"	"-0.00043"	"7/58"	"7"	"58"	"3960538.59576416"	"HCD"	"MS2"	"20.5289"	"286.6"	"100.000"	"65.3926"	"21102"	"21102"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"403.2"	""	"396.8"	""	"398.7"	""	"513.3"	""	"505.6"	"497.0"	""	"246"	"25"	"30.000"	"23.000"	"0.0369747385223273"	"19"	"0.0002277"	"0.001313"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGIFAFK"	"[K].iGGIFAFk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"655.91534"	"1310.82341"	"1310.82366"	"-0.19"	"-0.00013"	"7/58"	"7"	"58"	"4588769.77911377"	"HCD"	"MS2"	"24.23249"	"324.7"	"100.000"	"65.3591"	"21141"	"21141"	"21123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"459.4"	""	"448.4"	""	"436.8"	""	"574.7"	"0.1"	"569.3"	"586.4"	""	"243"	"25"	"30.000"	"23.000"	"0.0422256436153495"	"23"	"0.0002277"	"0.001331"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTQPLGLLR"	"[R].aLTQPLGLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"655.92053"	"1310.83379"	"1310.83574"	"-1.49"	"-0.00097"	"7/84"	"7"	"84"	"8770732.41473389"	"HCD"	"MS2"	"12.46626"	"411.4"	"100.000"	"53.4020"	"16274"	"16274"	"16264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"394.0"	""	"465.0"	""	"462.4"	""	"756.5"	""	"873.9"	"969.1"	""	"205"	"30"	"30.000"	"23.000"	"0.00987924749214569"	"21"	"0.0001889"	"0.0009556"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTQPLGLLR"	"[R].aLTQPLGLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.92096"	"1310.83464"	"1310.83574"	"-0.84"	"-0.00055"	"7/84"	"7"	"84"	"7306566.38787842"	"HCD"	"MS2"	"0"	"247.5"	"100.000"	"53.7182"	"16397"	"16397"	"16390"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"296.7"	""	"284.2"	""	"296.5"	""	"432.4"	"1.6"	"514.6"	"524.6"	""	"178"	"5"	"29.000"	"22.000"	"3.02266492605464"	"13"	"0.001879"	"0.02682"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQTLPQLR"	"[R].lLQTLPQLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"655.92102"	"1310.83476"	"1310.83574"	"-0.74"	"-0.00049"	"6/76"	"6"	"76"	"2422602.89984131"	"HCD"	"MS2"	"12.61258"	"129.5"	"100.000"	"56.5856"	"17563"	"17563"	"17541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.5"	""	"165.7"	""	"193.7"	""	"200.5"	""	"245.8"	"244.9"	""	"186"	"34"	"29.000"	"22.000"	"0.00386796867759441"	""	"0.0008731"	"0.008436"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTQPLGLLR"	"[R].aLTQPLGLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"655.92114"	"1310.83501"	"1310.83574"	"-0.56"	"-0.00036"	"9/84"	"9"	"84"	"6294148.7019043"	"HCD"	"MS2"	"0"	"305.2"	"100.000"	"53.1441"	"16121"	"16121"	"16113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"299.6"	""	"348.4"	""	"355.7"	""	"574.5"	""	"647.4"	"680.3"	""	"186"	"21"	"29.000"	"22.000"	"0.0679959347639579"	"16"	"0.00103"	"0.01212"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTQPLGLLR"	"[R].aLTQPLGLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"655.92175"	"1310.83623"	"1310.83574"	"0.38"	"0.00025"	"7/84"	"7"	"84"	"5997411.0123291"	"HCD"	"MS2"	"24.01836"	"249.4"	"100.000"	"53.4409"	"16233"	"16233"	"16221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.1"	""	"280.5"	""	"303.5"	""	"427.9"	"1.7"	"540.5"	"550.5"	""	"186"	"25"	"29.000"	"22.000"	"0.0315125065209459"	"15"	"0.0003839"	"0.001851"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQTLPQLR"	"[R].lLQTLPQLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"655.92200"	"1310.83672"	"1310.83574"	"0.75"	"0.00049"	"6/76"	"6"	"76"	"2273968.58978271"	"HCD"	"MS2"	"17.44287"	"122.5"	"100.000"	"56.3940"	"17431"	"17431"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.2"	""	"144.8"	""	"180.0"	""	"206.3"	""	"217.5"	"240.0"	""	"186"	"34"	"29.000"	"22.000"	"0.00395806524214381"	""	"0.0001889"	"0.001071"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THILLFLPK"	"[K].THILLFLPk.[S]"	"K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"437.61740"	"1310.83765"	"1310.83976"	"-1.61"	"-0.00070"	"7/64"	"7"	"64"	"4759962.20483398"	"HCD"	"MS2"	"14.25124"	"169.6"	"100.000"	"49.0912"	"14476"	"14476"	"14447"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.5"	""	"231.5"	""	"180.3"	""	"218.8"	""	"212.0"	"543.9"	""	"177"	"27"	"29.000"	"22.000"	"0.0175365141783751"	"19"	"0.0006037"	"0.005833"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THILLFLPK"	"[K].THILLFLPk.[S]"	"K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"437.61774"	"1310.83866"	"1310.83976"	"-0.84"	"-0.00037"	"7/64"	"7"	"64"	"6710157.68249512"	"HCD"	"MS2"	"24.05974"	"237.7"	"100.000"	"49.4443"	"14664"	"14664"	"14638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"311.9"	""	"340.3"	""	"245.2"	""	"284.0"	""	"293.4"	"787.0"	""	"177"	"27"	"29.000"	"22.000"	"0.0178214596112821"	"19"	"0.0008731"	"0.008797"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPFVTSDR"	"[K].fNPFVTSDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"656.34760"	"1311.68791"	"1311.68947"	"-1.18"	"-0.00078"	"5/82"	"5"	"82"	"4454035.12249756"	"HCD"	"MS2"	"28.8747"	"293.1"	"100.000"	"45.7646"	"13165"	"13165"	"13154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"419.1"	""	"418.9"	""	"467.9"	""	"478.3"	"4.2"	"517.6"	"467.1"	""	"683"	"28"	"35.000"	"28.000"	"0.0593458983017912"	"22"	"0.0001889"	"0.001035"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIYNNMK"	"[R].aIYNNMk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"656.37677"	"1311.74626"	"1311.74951"	"-2.48"	"-0.00163"	"12/56"	"12"	"56"	"3402462.17694092"	"HCD"	"MS2"	"0"	"311.2"	"100.000"	"34.0610"	"8386"	"8386"	"8370"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"370.4"	""	"368.3"	""	"396.4"	""	"369.2"	""	"522.0"	"933.1"	""	"633"	"35"	"35.000"	"28.000"	"0.0100779851562632"	"21"	"0.0004166"	"0.002469"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIYNNMK"	"[R].aIYNNMk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"656.37775"	"1311.74822"	"1311.74951"	"-0.99"	"-0.00065"	"12/56"	"12"	"56"	"4527240.03662109"	"HCD"	"MS2"	"0"	"418.0"	"100.000"	"34.0335"	"8331"	"8331"	"8305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"493.9"	""	"487.4"	""	"543.7"	""	"505.7"	""	"696.0"	"1250.3"	""	"619"	"35"	"34.000"	"27.000"	"0.0100614518540792"	"26"	"0.0004166"	"0.002514"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"656.38110"	"1311.75493"	"1311.75604"	"-0.84"	"-0.00055"	"6/56"	"6"	"56"	"10678301.7209473"	"HCD"	"MS2"	"0"	"895.7"	"100.000"	"35.4764"	"8964"	"8964"	"8938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1481.0"	""	"1392.2"	""	"1269.7"	""	"1198.1"	""	"1614.1"	"1524.8"	""	"604"	"34"	"34.000"	"27.000"	"0.0133969810467293"	"21"	"0.0008125"	"0.007738"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"656.38129"	"1311.75530"	"1311.75604"	"-0.57"	"-0.00037"	"6/56"	"6"	"56"	"10938576.2558594"	"HCD"	"MS2"	"0"	"901.6"	"100.000"	"35.4255"	"8900"	"8900"	"8875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1468.5"	""	"1421.5"	""	"1218.0"	""	"1229.6"	""	"1645.8"	"1557.4"	""	"604"	"32"	"34.000"	"27.000"	"0.0190988379115618"	"21"	"0.0006037"	"0.004716"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"MNPIIHK"	"[K].mnPIIHk.[F]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P21643"	"Tryptophan 2,3-dioxygenase OS=Rattus norvegicus OX=10116 GN=Tdo2 PE=1 SV=1"	"P21643"	"Tryptophan 2,3-dioxygenase OS=Rattus norvegicus OX=10116 GN=Tdo2 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"437.93307"	"1311.78467"	"1311.78590"	"-0.94"	"-0.00041"	"6/60"	"6"	"60"	"20333304.1680908"	"HCD"	"MS2"	"38.61907"	"513.1"	"57.371"	"40.7815"	"11138"	"11138"	"11117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"637.7"	""	"595.7"	""	"463.1"	""	"713.4"	""	"1215.9"	"1262.1"	""	"448"	"11"	"33.000"	"26.000"	"1.90654920557332"	"23"	"0.004631"	"0.1334"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPIIHK"	"[K].mnPIIHk.[F]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P21643"	"Tryptophan 2,3-dioxygenase OS=Rattus norvegicus OX=10116 GN=Tdo2 PE=1 SV=1"	"P21643"	"Tryptophan 2,3-dioxygenase OS=Rattus norvegicus OX=10116 GN=Tdo2 PE=1 SV=1"	"0"	"3"	"3"	"0.0769"	"0.0000"	"1"	"1"	"1"	"437.93320"	"1311.78504"	"1311.78590"	"-0.66"	"-0.00029"	"4/60"	"4"	"60"	"23323773.6561279"	"HCD"	"MS2"	"47.97404"	"625.7"	"65.101"	"40.6119"	"11025"	"11025"	"10997"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"761.3"	""	"696.6"	""	"594.1"	""	"876.9"	"0.1"	"1495.0"	"1534.8"	""	"450"	"13"	"33.000"	"26.000"	"1.18353884937909"	"25"	"0.005916"	"0.1959"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPPNWK"	"[R].vLPPNWk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"437.94391"	"1311.81717"	"1311.81891"	"-1.33"	"-0.00058"	"6/54"	"6"	"54"	"1667532.84924316"	"HCD"	"MS2"	"40.54689"	"88.5"	"100.000"	"47.1826"	"13743"	"13743"	"13714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.1"	""	"124.7"	""	"134.5"	""	"150.3"	""	"166.1"	"157.5"	""	"279"	"20"	"31.000"	"24.000"	"0.13322146574999"	"19"	"0.0006037"	"0.006038"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPPNWK"	"[R].vLPPNWk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"437.94394"	"1311.81726"	"1311.81891"	"-1.26"	"-0.00055"	"8/54"	"8"	"54"	"1847816.89422607"	"HCD"	"MS2"	"11.54603"	"97.1"	"100.000"	"46.8631"	"13612"	"13612"	"13586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.9"	""	"144.3"	""	"143.7"	""	"156.0"	"0.4"	"182.3"	"165.6"	""	"279"	"16"	"31.000"	"24.000"	"0.382449596983939"	"15"	"0.0003839"	"0.001916"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPPNWK"	"[R].vLPPNWk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.41229"	"1311.81731"	"1311.81891"	"-1.22"	"-0.00080"	"5/54"	"5"	"54"	"3612395.64691162"	"HCD"	"MS2"	"100"	"234.6"	"100.000"	"46.2134"	"13298"	"13298"	"13272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.2"	""	"320.2"	""	"350.1"	""	"357.1"	"0.6"	"460.0"	"425.9"	""	"279"	"14"	"31.000"	"24.000"	"0.527927405680345"	"13"	"0.005008"	"0.151"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPPNWK"	"[R].vLPPNWk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"656.41278"	"1311.81828"	"1311.81891"	"-0.48"	"-0.00031"	"5/54"	"5"	"54"	"5480084.37939453"	"HCD"	"MS2"	"4.00147"	"296.7"	"100.000"	"46.7827"	"13579"	"13579"	"13554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"403.8"	""	"396.8"	""	"499.3"	""	"453.4"	"1.5"	"551.3"	"503.3"	""	"279"	"35"	"31.000"	"24.000"	"0.00434084429026289"	"20"	"0.002981"	"0.05726"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPPNWK"	"[R].vLPPNWk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"656.41278"	"1311.81828"	"1311.81891"	"-0.48"	"-0.00031"	"6/54"	"6"	"54"	"3371589.67822266"	"HCD"	"MS2"	"27.6405"	"219.5"	"100.000"	"46.1542"	"13322"	"13322"	"13296"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"301.6"	""	"303.4"	"2.7"	"321.0"	""	"357.1"	""	"402.5"	"391.5"	""	"279"	"31"	"31.000"	"24.000"	"0.0120941181668271"	"18"	"0.002953"	"0.05114"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPPNWK"	"[R].vLPPNWk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"656.41290"	"1311.81853"	"1311.81891"	"-0.29"	"-0.00019"	"5/54"	"5"	"54"	"3530500.90106201"	"HCD"	"MS2"	"0"	"215.8"	"100.000"	"46.4797"	"13455"	"13455"	"13429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"329.6"	""	"282.6"	""	"342.1"	""	"321.8"	"5.5"	"394.2"	"366.6"	""	"279"	"31"	"31.000"	"24.000"	"0.00992142851546393"	"19"	"0.002361"	"0.03468"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPPNWK"	"[R].vLPPNWk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"656.41290"	"1311.81853"	"1311.81891"	"-0.29"	"-0.00019"	"5/54"	"5"	"54"	"5192486.17779541"	"HCD"	"MS2"	"4.041206"	"291.4"	"100.000"	"46.5162"	"13422"	"13422"	"13400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.8"	""	"400.4"	""	"458.7"	""	"447.1"	""	"551.2"	"503.2"	""	"279"	"35"	"31.000"	"24.000"	"0.00451413151416831"	"20"	"0.001966"	"0.02979"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPPNWK"	"[R].vLPPNWk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"437.94437"	"1311.81855"	"1311.81891"	"-0.28"	"-0.00012"	"6/54"	"6"	"54"	"1833092.64532471"	"HCD"	"MS2"	"40.021"	"91.1"	"100.000"	"46.7647"	"13524"	"13524"	"13496"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.1"	""	"117.8"	""	"139.8"	""	"145.1"	"0.2"	"166.0"	"179.6"	""	"279"	"19"	"31.000"	"24.000"	"0.168102513681866"	"15"	"0.0006037"	"0.00517"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPPNWK"	"[R].vLPPNWk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"656.41333"	"1311.81938"	"1311.81891"	"0.36"	"0.00023"	"5/54"	"5"	"54"	"4951313.79919434"	"HCD"	"MS2"	"2.990991"	"292.6"	"100.000"	"46.8270"	"13549"	"13549"	"13528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"386.9"	""	"420.3"	""	"423.3"	""	"452.3"	""	"570.0"	"525.9"	""	"274"	"35"	"31.000"	"24.000"	"0.004474253300761"	"20"	"0.002553"	"0.03875"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPPNWK"	"[R].vLPPNWk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"656.41339"	"1311.81951"	"1311.81891"	"0.45"	"0.00030"	"5/54"	"5"	"54"	"5232058.95568848"	"HCD"	"MS2"	"0"	"290.2"	"100.000"	"47.0907"	"13705"	"13705"	"13682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"387.1"	""	"405.8"	""	"442.3"	""	"459.6"	"1.5"	"545.7"	"507.4"	""	"274"	"35"	"31.000"	"24.000"	"0.00437240686148804"	"20"	"0.00252"	"0.03839"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLAIVNK"	"[R].vPLAIVNk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.3077"	"0.0000"	"1"	"1"	"1"	"437.96320"	"1311.87503"	"1311.87643"	"-1.06"	"-0.00046"	"9/60"	"9"	"60"	"4172438.48291016"	"HCD"	"MS2"	"21.25405"	"185.7"	"100.000"	"48.7784"	"14348"	"14348"	"14319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"239.6"	""	"241.9"	""	"272.1"	""	"305.7"	"1.7"	"354.4"	"345.4"	""	"72"	"26"	"25.000"	"18.000"	"0.00986966701894038"	""	"0.0006037"	"0.005109"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLAIVNK"	"[R].vPLAIVNk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"437.96323"	"1311.87513"	"1311.87643"	"-0.99"	"-0.00043"	"9/60"	"9"	"60"	"4244506.03161621"	"HCD"	"MS2"	"23.51903"	"183.2"	"100.000"	"49.0560"	"14509"	"14509"	"14479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.0"	""	"229.7"	""	"268.9"	""	"304.4"	""	"340.7"	"333.6"	""	"72"	"24"	"25.000"	"18.000"	"0.0153568626768573"	""	"0.0006037"	"0.004653"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLAIVNK"	"[R].vPLAIVNk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.3111"	"0.0000"	"1"	"1"	"1"	"656.44141"	"1311.87554"	"1311.87643"	"-0.68"	"-0.00045"	"7/60"	"7"	"60"	"6599357.96008301"	"HCD"	"MS2"	"46.11367"	"303.2"	"100.000"	"48.9662"	"14472"	"14472"	"14447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"392.5"	""	"403.1"	""	"408.2"	""	"497.2"	""	"571.8"	"604.6"	""	"72"	"45"	"25.000"	"18.000"	"0.000110484791582082"	""	"0.0003839"	"0.001746"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLAIVNK"	"[R].vPLAIVNk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.3200"	"0.0000"	"1"	"1"	"1"	"656.44189"	"1311.87651"	"1311.87643"	"0.06"	"0.00004"	"7/60"	"7"	"60"	"6777200.68041992"	"HCD"	"MS2"	"27.96638"	"312.1"	"100.000"	"48.6889"	"14311"	"14311"	"14287"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"406.3"	""	"409.4"	""	"424.5"	""	"498.0"	"0.7"	"611.9"	"609.1"	""	"72"	"50"	"25.000"	"18.000"	"4.02997638048175E-05"	""	"0.0001889"	"0.0008267"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPGVDALSNV"	"[K].vLPGVDALSNV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"656.88611"	"1312.76494"	"1312.76738"	"-1.86"	"-0.00122"	"6/86"	"6"	"86"	"1258091.3949585"	"HCD"	"MS2"	"10.72413"	"34.9"	"100.000"	"72.7446"	"24147"	"24147"	"24127"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.2"	""	"49.0"	""	"45.6"	""	"52.7"	"1.5"	"66.0"	"69.6"	""	"528"	"43"	"34.000"	"27.000"	"0.00138868558327146"	"18"	"0.0006037"	"0.003779"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPGVDALSNV"	"[K].vLPGVDALSNV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"656.88623"	"1312.76518"	"1312.76738"	"-1.67"	"-0.00110"	"8/86"	"8"	"86"	"4622309.8258667"	"HCD"	"MS2"	"11.4932"	"47.0"	"100.000"	"72.4334"	"24020"	"24020"	"23999"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.8"	""	"60.1"	""	"70.2"	""	"69.4"	"0.4"	"85.8"	"91.1"	""	"528"	"46"	"34.000"	"27.000"	"0.00062460280013624"	"18"	"0.0002277"	"0.001188"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPGVDALSNV"	"[K].vLPGVDALSNV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"656.88751"	"1312.76775"	"1312.76738"	"0.28"	"0.00018"	"8/86"	"8"	"86"	"1609125.52227783"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"72.7487"	"24098"	"24098"	"24081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.8"	""	"44.1"	""	"61.2"	""	"55.0"	"2.0"	"71.1"	"69.8"	""	"524"	"48"	"34.000"	"27.000"	"0.000433811730429016"	"19"	"0.0002277"	"0.001302"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPGVDALSNV"	"[K].vLPGVDALSNV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"656.88788"	"1312.76848"	"1312.76738"	"0.84"	"0.00055"	"6/86"	"6"	"86"	"3597524.28973389"	"HCD"	"MS2"	"12.26059"	"42.0"	"100.000"	"72.4445"	"23973"	"23973"	"23953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.4"	""	"54.0"	""	"59.4"	""	"71.4"	""	"69.5"	"91.7"	""	"512"	"40"	"34.000"	"27.000"	"0.00237268434785113"	"18"	"0.0006037"	"0.003914"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGFGLIK"	"[K].gYGFGLIk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.4242"	"0.0000"	"1"	"1"	"1"	"656.90515"	"1312.80303"	"1312.80293"	"0.07"	"0.00005"	"11/58"	"11"	"58"	"7972729.63293457"	"HCD"	"MS2"	"32.59202"	"650.2"	"100.000"	"52.7428"	"16009"	"16009"	"15990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"819.1"	""	"1051.3"	""	"999.5"	""	"989.5"	"0.2"	"1048.7"	"1246.2"	""	"350"	"33"	"32.000"	"25.000"	"0.00837602661564617"	""	"0.0002277"	"0.001154"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGFGLIK"	"[K].gYGFGLIk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"656.90546"	"1312.80364"	"1312.80293"	"0.54"	"0.00035"	"7/58"	"7"	"58"	"7372011.82684326"	"HCD"	"MS2"	"21.2017"	"617.5"	"100.000"	"52.5400"	"15876"	"15876"	"15858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"764.0"	""	"986.9"	""	"955.1"	""	"892.7"	"8.7"	"1007.2"	"1232.3"	""	"349"	"32"	"32.000"	"25.000"	"0.0122968940534767"	""	"0.0003839"	"0.001882"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFAYLGR"	"[R].kFAYLGR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"438.27609"	"1312.81372"	"1312.81416"	"-0.33"	"-0.00015"	"6/62"	"6"	"62"	"15740651.3394165"	"HCD"	"MS2"	"40.3544"	"871.5"	"84.450"	"34.8391"	"8702"	"8702"	"8682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1370.3"	""	"1396.0"	""	"1469.5"	""	"1394.3"	""	"1336.8"	"1268.8"	""	"320"	"2"	"32.000"	"25.000"	"9.4432172827495"	"13"	"0.002424"	"0.03601"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFAYLGR"	"[R].kFAYLGR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"438.27618"	"1312.81400"	"1312.81416"	"-0.12"	"-0.00005"	"6/62"	"6"	"62"	"16341776.8362427"	"HCD"	"MS2"	"56.58441"	"786.9"	"67.383"	"34.8089"	"8647"	"8647"	"8622"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1244.6"	""	"1226.8"	""	"1304.0"	""	"1248.4"	"0.7"	"1256.2"	"1152.8"	""	"318"	"4"	"32.000"	"25.000"	"6.61297870685495"	"13"	"0.001686"	"0.02331"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPSPIEK"	"[K].aLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"438.27905"	"1312.82260"	"1312.82406"	"-1.11"	"-0.00048"	"8/62"	"8"	"62"	"8939567.70281982"	"HCD"	"MS2"	"0"	"346.8"	"100.000"	"40.1391"	"10876"	"10876"	"10845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"571.7"	""	"623.6"	""	"400.3"	""	"485.9"	""	"631.8"	"570.1"	""	"273"	"24"	"31.000"	"24.000"	"0.0557355962344125"	"17"	"0.0001889"	"0.001032"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPSPIEK"	"[K].aLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"656.91498"	"1312.82268"	"1312.82406"	"-1.05"	"-0.00069"	"7/62"	"7"	"62"	"43935626.5595703"	"HCD"	"MS2"	"0"	"367.1"	"14.857"	"40.1944"	"10854"	"10854"	"10837"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"610.8"	""	"616.9"	""	"430.0"	""	"483.1"	""	"703.8"	"636.9"	""	"273"	"44"	"31.000"	"24.000"	"0.000511838148065085"	""	"0.002393"	"0.03551"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPSPIEK"	"[K].aLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"656.91498"	"1312.82268"	"1312.82406"	"-1.05"	"-0.00069"	"7/62"	"7"	"62"	"14285762.4535522"	"HCD"	"MS2"	"0"	"761.9"	"100.000"	"40.0324"	"10832"	"10832"	"10813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1354.1"	""	"1391.0"	""	"877.2"	""	"1064.1"	"2.0"	"1319.7"	"1196.6"	""	"273"	"41"	"31.000"	"24.000"	"0.00106446810086425"	""	"0.0008731"	"0.00951"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPSPIEK"	"[K].aLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"656.91510"	"1312.82292"	"1312.82406"	"-0.86"	"-0.00057"	"7/62"	"7"	"62"	"15635764.9279175"	"HCD"	"MS2"	"9.266829"	"831.4"	"100.000"	"39.9095"	"10738"	"10738"	"10709"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1480.7"	""	"1516.5"	""	"959.3"	""	"1148.7"	""	"1381.1"	"1375.9"	""	"273"	"44"	"31.000"	"24.000"	"0.000518958525977566"	""	"0.0001889"	"0.0009813"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPSPIEK"	"[K].aLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"438.27924"	"1312.82315"	"1312.82406"	"-0.69"	"-0.00030"	"8/62"	"8"	"62"	"10484807.4442139"	"HCD"	"MS2"	"9.541128"	"410.4"	"100.000"	"40.0251"	"10785"	"10785"	"10757"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"678.8"	""	"707.2"	""	"493.5"	""	"552.4"	""	"762.5"	"696.0"	""	"273"	"24"	"31.000"	"24.000"	"0.0556074079202614"	"15"	"0.000523"	"0.003063"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPSPIEK"	"[K].aLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"656.91534"	"1312.82341"	"1312.82406"	"-0.49"	"-0.00032"	"7/62"	"7"	"62"	"49370828.8027344"	"HCD"	"MS2"	"0.1742581"	"425.4"	"16.703"	"40.3404"	"10958"	"10958"	"10941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"725.9"	""	"734.4"	""	"491.4"	""	"557.8"	"1.6"	"770.9"	"744.7"	""	"273"	"44"	"31.000"	"24.000"	"0.000509486465391159"	""	"0.0004557"	"0.002601"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPSPIEK"	"[K].aLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"656.91577"	"1312.82427"	"1312.82406"	"0.16"	"0.00010"	"7/62"	"7"	"62"	"2981453.37457275"	"HCD"	"MS2"	"20.33736"	"248.9"	"100.000"	"40.6829"	"11098"	"11098"	"11069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.9"	""	"362.0"	""	"332.4"	""	"361.3"	"0.2"	"506.0"	"471.1"	""	"271"	"42"	"31.000"	"24.000"	"0.000922442481030019"	"20"	"0.000523"	"0.003267"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLQAVGMFR"	"[R].yLQAVGMFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"657.36462"	"1313.72197"	"1313.72374"	"-1.35"	"-0.00089"	"7/78"	"7"	"78"	"2133361.02410889"	"HCD"	"MS2"	"0"	"128.6"	"100.000"	"53.4866"	"16250"	"16250"	"16242"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.4"	""	"180.7"	""	"212.5"	""	"172.3"	"0.4"	"232.4"	"238.6"	""	"694"	"29"	"35.000"	"28.000"	"0.0455333364959664"	"19"	"0.0001889"	"0.0006991"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYTFQLLR"	"[R].sGYTFQLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"657.37402"	"1313.74077"	"1313.74150"	"-0.56"	"-0.00037"	"7/76"	"7"	"76"	"13832103.0026245"	"HCD"	"MS2"	"17.98055"	"721.5"	"98.801"	"48.9535"	"14419"	"14419"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"941.7"	""	"1135.4"	""	"910.7"	""	"1137.9"	"0.1"	"1406.8"	"1308.2"	""	"677"	"33"	"35.000"	"28.000"	"0.0175613813177453"	"16"	"0.0001889"	"0.0005602"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYTFQLLR"	"[R].sGYTFQLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"657.37469"	"1313.74211"	"1313.74150"	"0.46"	"0.00031"	"7/76"	"7"	"76"	"18239440.0037842"	"HCD"	"MS2"	"7.646404"	"734.4"	"81.476"	"49.2603"	"14592"	"14592"	"14574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"973.2"	""	"1175.5"	""	"908.5"	""	"1143.0"	""	"1396.4"	"1369.9"	""	"683"	"44"	"35.000"	"28.000"	"0.00147024837482919"	"18"	"0.0001889"	"0.0004647"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSMVIDK"	"[R].fSmVIDk.[G]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"657.38031"	"1313.75334"	"1313.75393"	"-0.45"	"-0.00029"	"6/56"	"6"	"56"	"4726330.23486328"	"HCD"	"MS2"	"20.73685"	"306.1"	"100.000"	"41.1049"	"11271"	"11271"	"11245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"438.4"	""	"409.8"	""	"510.2"	""	"477.9"	"2.9"	"537.4"	"520.0"	""	"630"	"20"	"34.000"	"27.000"	"0.349390066807656"	"21"	"0.00274"	"0.04387"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSMVIDK"	"[R].fSmVIDk.[G]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"657.38153"	"1313.75578"	"1313.75393"	"1.41"	"0.00093"	"6/56"	"6"	"56"	"5136366.00854492"	"HCD"	"MS2"	"13.43629"	"346.4"	"100.000"	"40.9307"	"11156"	"11156"	"11125"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"505.6"	""	"458.0"	""	"580.0"	""	"536.5"	"3.1"	"603.1"	"591.7"	""	"596"	"20"	"34.000"	"27.000"	"0.330534094948195"	"17"	"0.003882"	"0.09779"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILYGDFK"	"[R].iLYGDFk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12847"	"Myosin-3 OS=Rattus norvegicus OX=10116 GN=Myh3 PE=3 SV=1"	"P12847"	"Myosin-3 OS=Rattus norvegicus OX=10116 GN=Myh3 PE=3 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"657.39636"	"1313.78545"	"1313.78695"	"-1.14"	"-0.00075"	"4/48"	"4"	"48"	"4252633.00939941"	"HCD"	"MS2"	"62.37734"	"234.4"	"100.000"	"51.9762"	"15696"	"15696"	"15670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.8"	""	"156.0"	""	"184.1"	""	"233.0"	""	"266.0"	"1188.6"	""	"479"	"5"	"33.000"	"26.000"	"7.31653606615116"	"17"	"0.001007"	"0.01095"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDGLFK"	"[R].lYDGLFk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"657.39716"	"1313.78703"	"1313.78695"	"0.07"	"0.00004"	"6/48"	"6"	"48"	"7502012.48272705"	"HCD"	"MS2"	"36.9863"	"602.7"	"100.000"	"56.7448"	"17628"	"17628"	"17605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"766.9"	""	"686.6"	""	"702.2"	""	"1248.7"	""	"1115.0"	"1200.3"	""	"480"	"23"	"33.000"	"26.000"	"0.127412266615437"	""	"0.0008731"	"0.009069"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHGNVILLR"	"[K].yHGNVILLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"438.60065"	"1313.78739"	"1313.78912"	"-1.32"	"-0.00058"	"6/76"	"6"	"76"	"9586721.43737793"	"HCD"	"MS2"	"35.45563"	"247.6"	"100.000"	"34.6896"	"8598"	"8598"	"8574"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"346.3"	""	"353.6"	""	"394.7"	""	"422.7"	""	"420.8"	"408.5"	""	"479"	"23"	"33.000"	"26.000"	"0.122830301465932"	"22"	"0.0001308"	"0.000251"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDGLFK"	"[R].lYDGLFk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"657.39764"	"1313.78801"	"1313.78695"	"0.81"	"0.00053"	"10/48"	"10"	"48"	"6908637.9586792"	"HCD"	"MS2"	"39.14719"	"624.6"	"100.000"	"56.5509"	"17495"	"17495"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"756.5"	""	"723.6"	""	"741.8"	""	"1284.1"	""	"1171.3"	"1248.3"	""	"482"	"23"	"33.000"	"26.000"	"0.121064564074895"	""	"0.0009404"	"0.009846"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHGNVILLR"	"[K].yHGNVILLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"438.60089"	"1313.78812"	"1313.78912"	"-0.76"	"-0.00033"	"6/76"	"6"	"76"	"11711333.9536743"	"HCD"	"MS2"	"13.8281"	"441.1"	"100.000"	"34.7766"	"8677"	"8677"	"8650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"642.4"	""	"668.5"	""	"739.4"	""	"740.8"	""	"697.9"	"680.7"	""	"484"	"25"	"33.000"	"26.000"	"0.0722462593778146"	"21"	"0.0001889"	"0.0007173"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APILLSSLDR"	"[K].aPILLSSLDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"657.40265"	"1313.79802"	"1313.79902"	"-0.76"	"-0.00050"	"10/78"	"10"	"78"	"2908521.9241333"	"HCD"	"MS2"	"16.87436"	"191.9"	"100.000"	"52.9929"	"16062"	"16062"	"16034"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.8"	""	"257.7"	""	"269.5"	""	"317.5"	"1.7"	"382.3"	"360.1"	""	"462"	"25"	"33.000"	"26.000"	"0.0658585219793403"	"18"	"0.0001859"	"0.0003192"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APILLSSLDR"	"[K].aPILLSSLDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"657.40295"	"1313.79863"	"1313.79902"	"-0.29"	"-0.00019"	"8/78"	"8"	"78"	"2795312.97143555"	"HCD"	"MS2"	"0"	"186.0"	"100.000"	"53.1936"	"16194"	"16194"	"16166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"238.0"	""	"261.7"	""	"266.2"	""	"291.2"	"2.6"	"350.9"	"352.5"	""	"461"	"23"	"33.000"	"26.000"	"0.11821454901001"	"20"	"7.476E-05"	"0.0002052"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APILLSSLDR"	"[K].aPILLSSLDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"657.40350"	"1313.79973"	"1313.79902"	"0.54"	"0.00036"	"9/78"	"9"	"78"	"3566295.61962891"	"HCD"	"MS2"	"39.62663"	"223.5"	"100.000"	"53.1616"	"16181"	"16181"	"16150"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.9"	""	"292.5"	""	"310.7"	""	"371.6"	"3.5"	"415.8"	"458.5"	""	"472"	"29"	"33.000"	"26.000"	"0.0316892530828536"	"17"	"0.0001308"	"0.0002432"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLYLCGGDD"	"[K].aLLYLcGGDD.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.81689"	"1314.62651"	"1314.62713"	"-0.47"	"-0.00031"	"8/76"	"8"	"76"	"1657438.39129639"	"HCD"	"MS2"	"18.61575"	"15.9"	"100.000"	"90.3527"	"31197"	"31197"	"31194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.0"	""	"24.2"	""	"17.5"	""	"29.0"	""	"25.3"	"33.8"	""	"318"	"45"	"32.000"	"25.000"	"0.000485732457001267"	"15"	"0.0001889"	"0.0003801"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLYLCGGDD"	"[K].aLLYLcGGDD.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.81708"	"1314.62688"	"1314.62713"	"-0.19"	"-0.00012"	"7/76"	"7"	"76"	"1830166.22802734"	"HCD"	"MS2"	"17.92902"	"16.6"	"100.000"	"90.2798"	"31141"	"31141"	"31126"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.1"	""	"24.2"	""	"19.0"	""	"33.6"	""	"26.4"	"35.5"	""	"317"	"38"	"32.000"	"25.000"	"0.00260033479052127"	"15"	"0.0001889"	"0.0007732"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEWVYGYR"	"[KR].lEWVYGYR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3; Q6ED65"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2; Echinoderm microtubule-associated protein-like 5 OS=Rattus norvegicus OX=10116 GN=Eml5 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"657.85510"	"1314.70293"	"1314.70439"	"-1.11"	"-0.00073"	"5/56"	"5"	"56"	"4299500.43969727"	"HCD"	"MS2"	"18.63474"	"217.8"	"100.000"	"56.1079"	"17314"	"17314"	"17291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"293.9"	""	"289.5"	""	"305.3"	""	"352.8"	"3.4"	"385.7"	"433.4"	""	"661"	"10"	"35.000"	"28.000"	"3.09151575305766"	"16"	"0.000523"	"0.003282"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEWVYGYR"	"[KR].lEWVYGYR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3; Q6ED65"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2; Echinoderm microtubule-associated protein-like 5 OS=Rattus norvegicus OX=10116 GN=Eml5 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"657.85541"	"1314.70354"	"1314.70439"	"-0.65"	"-0.00042"	"5/56"	"5"	"56"	"5914656.99578857"	"HCD"	"MS2"	"18.17108"	"274.4"	"100.000"	"56.3462"	"17465"	"17465"	"17445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"370.7"	""	"372.4"	""	"378.5"	""	"456.5"	"4.5"	"491.8"	"526.1"	""	"661"	"10"	"35.000"	"28.000"	"3.62386043825322"	"19"	"0.0006037"	"0.004011"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDLVLDR"	"[K].eIIDLVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"3"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"657.89441"	"1314.78154"	"1314.78303"	"-1.13"	"-0.00075"	"6/78"	"6"	"78"	"11956014.541626"	"HCD"	"MS2"	"1.97446"	"459.5"	"100.000"	"71.6651"	"23707"	"23707"	"23690"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"639.9"	""	"589.3"	""	"646.2"	""	"789.5"	"1.1"	"854.3"	"833.1"	""	"588"	"47"	"34.000"	"27.000"	"0.000656670233512176"	"26"	"0.0001308"	"0.000248"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDLVLDR"	"[K].eIIDLVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"3"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"657.89459"	"1314.78191"	"1314.78303"	"-0.86"	"-0.00056"	"7/78"	"7"	"78"	"11165564.4530029"	"HCD"	"MS2"	"0.580052"	"463.2"	"100.000"	"71.7358"	"23684"	"23684"	"23667"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"642.8"	""	"588.7"	""	"675.8"	""	"756.7"	"4.7"	"882.8"	"837.6"	""	"599"	"47"	"34.000"	"27.000"	"0.000570685485029992"	"27"	"0.0001308"	"0.0002362"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLASVQALLR"	"[R].dLASVQALLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.5091"	"0.0000"	"1"	"1"	"1"	"438.93588"	"1314.79309"	"1314.79427"	"-0.89"	"-0.00039"	"13/86"	"13"	"86"	"1517738.60742188"	"HCD"	"MS2"	"10.49245"	"31.1"	"100.000"	"60.4816"	"19150"	"19150"	"19123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.5"	""	"37.8"	""	"40.8"	""	"52.0"	"1.6"	"60.7"	"65.1"	""	"572"	"55"	"34.000"	"27.000"	"9.53599540502851E-05"	""	"0.0001308"	"0.0002315"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLASVQALLR"	"[R].dLASVQALLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"657.90033"	"1314.79338"	"1314.79427"	"-0.67"	"-0.00044"	"8/86"	"8"	"86"	"5356796.50616455"	"HCD"	"MS2"	"0"	"228.4"	"100.000"	"60.2440"	"19053"	"19053"	"19027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.5"	""	"307.5"	""	"296.1"	""	"338.4"	"2.5"	"410.5"	"500.2"	""	"598"	"64"	"34.000"	"27.000"	"1.1160179718092E-05"	""	"0"	"5.487E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLASVQALLR"	"[R].dLASVQALLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"657.90033"	"1314.79338"	"1314.79427"	"-0.67"	"-0.00044"	"8/86"	"8"	"86"	"7194698.4586792"	"HCD"	"MS2"	"16.31075"	"309.4"	"94.958"	"60.5414"	"19174"	"19174"	"19155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"418.5"	"3.0"	"396.5"	""	"405.1"	""	"432.5"	""	"576.4"	"706.4"	""	"598"	"62"	"34.000"	"27.000"	"1.92606610389038E-05"	""	"0"	"8.032E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLASVQALLR"	"[R].dLASVQALLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"657.90057"	"1314.79387"	"1314.79427"	"-0.30"	"-0.00020"	"8/86"	"8"	"86"	"4284771.19390869"	"HCD"	"MS2"	"18.01809"	"191.1"	"100.000"	"60.0875"	"18936"	"18936"	"18905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.5"	""	"238.5"	""	"252.1"	""	"277.3"	""	"347.1"	"443.7"	""	"597"	"64"	"34.000"	"27.000"	"1.15065289763233E-05"	""	"0"	"3.372E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLASVQALLR"	"[R].dLASVQALLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"657.90057"	"1314.79387"	"1314.79427"	"-0.30"	"-0.00020"	"8/86"	"8"	"86"	"6802147.48162842"	"HCD"	"MS2"	"16.87489"	"304.0"	"100.000"	"60.4127"	"19068"	"19068"	"19049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"380.8"	""	"399.6"	""	"386.5"	""	"440.6"	"3.1"	"580.3"	"695.0"	""	"597"	"64"	"34.000"	"27.000"	"1.27041126320422E-05"	""	"0"	"5.838E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLASVQALLR"	"[R].dLASVQALLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.4237"	"0.0000"	"1"	"1"	"1"	"438.93643"	"1314.79474"	"1314.79427"	"0.36"	"0.00016"	"11/86"	"11"	"86"	"1659326.80780029"	"HCD"	"MS2"	"19.94229"	"33.6"	"100.000"	"60.3205"	"19031"	"19031"	"19001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.0"	""	"31.1"	""	"48.3"	""	"57.8"	"0.8"	"71.3"	"68.5"	""	"609"	"59"	"34.000"	"27.000"	"4.14559905810882E-05"	""	"0.0001859"	"0.0003637"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAVNPTVK"	"[K].aGAVNPTVk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"657.91040"	"1314.81352"	"1314.81456"	"-0.79"	"-0.00052"	"8/72"	"8"	"72"	"3535631.27636719"	"HCD"	"MS2"	"0"	"229.7"	"100.000"	"30.5022"	"6897"	"6897"	"6872"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.5"	""	"239.8"	""	"207.7"	""	"441.8"	"0.7"	"538.2"	"571.6"	""	"488"	"50"	"33.000"	"26.000"	"0.000232482264021771"	""	"0"	"0.00017"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAVNPTVK"	"[K].aGAVNPTVk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"657.91040"	"1314.81352"	"1314.81456"	"-0.79"	"-0.00052"	"8/72"	"8"	"72"	"3661484.08178711"	"HCD"	"MS2"	"0"	"238.7"	"100.000"	"30.5759"	"6968"	"6968"	"6944"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"189.1"	""	"269.6"	""	"209.0"	""	"464.8"	""	"533.2"	"608.8"	""	"488"	"52"	"33.000"	"26.000"	"0.00016880675690422"	""	"7.476E-05"	"0.0001927"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVHNVK"	"[K].fLVHNVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"3"	"3"	"0.6129"	"0.0000"	"1"	"1"	"1"	"438.94748"	"1314.82788"	"1314.82981"	"-1.47"	"-0.00064"	"5/54"	"5"	"54"	"40736986.1097412"	"HCD"	"MS2"	"24.52026"	"464.4"	"28.957"	"34.3434"	"8456"	"8456"	"8435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"636.3"	""	"655.1"	""	"708.3"	""	"760.5"	""	"865.0"	"774.0"	""	"417"	"31"	"33.000"	"26.000"	"0.0155993340856576"	"26"	"0.0003839"	"0.002066"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHSLKPK"	"[K].FHSLkPk.[L]"	"K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"657.91797"	"1314.82866"	"1314.82981"	"-0.88"	"-0.00058"	"8/52"	"8"	"52"	"176752.346069336"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"24.7725"	"4606"	"4606"	"4581"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.1"	""	"19.5"	""	"14.3"	""	"19.3"	""	"14.0"	"45.6"	""	"415"	"9"	"33.000"	"26.000"	"2.85770964795494"	"18"	"0.007254"	"0.2702"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVHNVK"	"[K].fLVHNVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"3"	"3"	"0.7347"	"0.0000"	"1"	"1"	"1"	"438.94778"	"1314.82880"	"1314.82981"	"-0.77"	"-0.00034"	"6/54"	"6"	"54"	"39297849.984375"	"HCD"	"MS2"	"11.94032"	"418.9"	"26.301"	"34.4073"	"8525"	"8525"	"8508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"586.1"	""	"575.2"	""	"624.9"	""	"686.1"	"0.5"	"772.1"	"722.3"	""	"415"	"49"	"33.000"	"26.000"	"0.000282499771611685"	""	"0.0003146"	"0.00148"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIQAIQK"	"[K].gVIQAIQk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"657.92902"	"1314.85076"	"1314.85094"	"-0.14"	"-0.00009"	"7/66"	"7"	"66"	"9026129.67114258"	"HCD"	"MS2"	"26.05736"	"590.5"	"100.000"	"38.6845"	"10281"	"10281"	"10257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"753.5"	""	"715.8"	""	"772.9"	""	"941.8"	""	"1156.4"	"1268.3"	""	"298"	"45"	"31.000"	"24.000"	"0.000504877792647411"	""	"0.0001889"	"0.0008242"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.38428"	"1315.76128"	"1315.76219"	"-0.69"	"-0.00045"	"6/64"	"6"	"64"	"463637.650939941"	"HCD"	"MS2"	"22.16037"	"42.2"	"100.000"	"30.8234"	"7070"	"7070"	"7040"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.6"	""	"51.9"	""	"56.7"	""	"71.5"	"1.2"	"82.8"	"76.5"	""	"714"	"1"	"35.000"	"28.000"	"30.9505389645683"	"13"	"0.004346"	"0.1172"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLGYTEK"	"[R].fLGYTEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"658.38617"	"1315.76506"	"1315.76621"	"-0.87"	"-0.00057"	"12/50"	"12"	"50"	"15435648.4071045"	"HCD"	"MS2"	"21.29018"	"456.0"	"34.423"	"42.9505"	"12024"	"12024"	"12003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"616.4"	"4.0"	"672.0"	""	"699.1"	""	"671.3"	"7.3"	"835.9"	"812.9"	""	"755"	"34"	"35.000"	"28.000"	"0.0148907631533418"	"28"	"0.0009404"	"0.009721"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVYFAEK"	"[K].tVYFAEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"0"	"2"	"2"	"0.3056"	"0.0000"	"1"	"1"	"1"	"658.38623"	"1315.76518"	"1315.76621"	"-0.78"	"-0.00051"	"12/58"	"12"	"58"	"17015624.5227051"	"HCD"	"MS2"	"0"	"1342.5"	"100.000"	"39.4894"	"10611"	"10611"	"10590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2107.7"	""	"2401.3"	""	"2177.4"	""	"2095.7"	"1.9"	"2205.0"	"1688.5"	""	"755"	"36"	"35.000"	"28.000"	"0.0102545582398675"	""	"0.0008731"	"0.008533"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLGYTEK"	"[R].fLGYTEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"658.38629"	"1315.76531"	"1315.76621"	"-0.69"	"-0.00045"	"12/50"	"12"	"50"	"13134757.0948486"	"HCD"	"MS2"	"18.26295"	"386.1"	"32.427"	"42.6897"	"11873"	"11873"	"11852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"527.8"	""	"563.0"	""	"589.4"	""	"577.7"	"9.4"	"729.4"	"660.2"	""	"755"	"34"	"35.000"	"28.000"	"0.0148223463113349"	"23"	"0.00119"	"0.01589"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVYFAEK"	"[K].tVYFAEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"0"	"2"	"2"	"0.3056"	"0.0000"	"1"	"1"	"1"	"658.38708"	"1315.76689"	"1315.76621"	"0.52"	"0.00034"	"12/58"	"12"	"58"	"12803588.1620483"	"HCD"	"MS2"	"0"	"1037.6"	"100.000"	"39.3640"	"10517"	"10517"	"10486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1618.2"	""	"1855.0"	""	"1627.5"	""	"1649.7"	"9.1"	"1748.2"	"1293.4"	""	"738"	"36"	"35.000"	"28.000"	"0.00984070847208425"	""	"0.0006037"	"0.004185"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSFIK"	"[K].sLYSFIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"439.27194"	"1315.80127"	"1315.80260"	"-1.00"	"-0.00044"	"5/54"	"5"	"54"	"1627511.60882568"	"HCD"	"MS2"	"0"	"76.8"	"100.000"	"55.0657"	"16888"	"16888"	"16859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.6"	""	"121.7"	""	"106.3"	""	"119.3"	"1.0"	"133.8"	"139.2"	""	"586"	"23"	"34.000"	"27.000"	"0.154834458770128"	"22"	"0.00109"	"0.01487"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSFIK"	"[K].sLYSFIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"439.27197"	"1315.80136"	"1315.80260"	"-0.94"	"-0.00041"	"5/54"	"5"	"54"	"2191504.87786865"	"HCD"	"MS2"	"7.881733"	"101.4"	"100.000"	"55.4173"	"17032"	"17032"	"17003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.0"	""	"141.1"	""	"172.2"	""	"154.7"	"1.5"	"192.9"	"168.6"	""	"586"	"27"	"34.000"	"27.000"	"0.0600990518395891"	"25"	"0.001217"	"0.01687"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSFIK"	"[K].sLYSFIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"439.27197"	"1315.80136"	"1315.80260"	"-0.94"	"-0.00041"	"5/54"	"5"	"54"	"1900462.48913574"	"HCD"	"MS2"	"0"	"86.3"	"100.000"	"55.2347"	"17011"	"17011"	"16981"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.8"	""	"132.3"	""	"129.9"	""	"142.0"	""	"143.5"	"149.3"	""	"586"	"25"	"34.000"	"27.000"	"0.0868695597130633"	"24"	"0.001158"	"0.01546"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSFIK"	"[K].sLYSFIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"658.40436"	"1315.80144"	"1315.80260"	"-0.88"	"-0.00058"	"12/54"	"12"	"54"	"14223435.1382446"	"HCD"	"MS2"	"1.663665"	"827.7"	"74.423"	"55.7150"	"17207"	"17207"	"17189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1122.4"	""	"1268.4"	""	"1351.6"	""	"1249.1"	"7.7"	"1396.5"	"1436.6"	""	"586"	"36"	"34.000"	"27.000"	"0.00812582790662989"	""	"0.0006737"	"0.006523"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSFIK"	"[K].sLYSFIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"658.40448"	"1315.80168"	"1315.80260"	"-0.69"	"-0.00046"	"12/54"	"12"	"54"	"14816404.585022"	"HCD"	"MS2"	"33.05115"	"798.6"	"72.773"	"55.1666"	"16929"	"16929"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1114.2"	""	"1203.4"	""	"1285.9"	""	"1244.8"	""	"1340.3"	"1373.2"	""	"586"	"32"	"34.000"	"27.000"	"0.0182333983554564"	""	"0.0006037"	"0.005747"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSFIK"	"[K].sLYSFIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"658.40479"	"1315.80229"	"1315.80260"	"-0.23"	"-0.00015"	"12/54"	"12"	"54"	"7309997.60821533"	"HCD"	"MS2"	"7.969798"	"612.0"	"100.000"	"54.8495"	"16799"	"16799"	"16780"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"881.9"	""	"913.3"	""	"987.3"	""	"905.1"	""	"1037.6"	"1066.1"	""	"580"	"35"	"34.000"	"27.000"	"0.00846053834060338"	""	"0.000523"	"0.003175"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSFIK"	"[K].sLYSFIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"658.40491"	"1315.80254"	"1315.80260"	"-0.04"	"-0.00003"	"12/54"	"12"	"54"	"14786693.2438965"	"HCD"	"MS2"	"1.914778"	"923.0"	"75.124"	"55.4700"	"17053"	"17053"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1308.8"	""	"1409.8"	""	"1503.3"	""	"1376.8"	""	"1553.8"	"1581.9"	""	"580"	"35"	"34.000"	"27.000"	"0.00822996518248051"	""	"0.0009404"	"0.009878"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSFIK"	"[K].sLYSFIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"658.40491"	"1315.80254"	"1315.80260"	"-0.04"	"-0.00003"	"12/54"	"12"	"54"	"14589639.2878418"	"HCD"	"MS2"	"22.04552"	"1098.0"	"100.000"	"55.4024"	"17079"	"17079"	"17061"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1546.8"	""	"1660.2"	""	"1807.0"	""	"1671.7"	""	"1848.8"	"1857.8"	""	"580"	"32"	"34.000"	"27.000"	"0.0173140233109313"	""	"0.0009404"	"0.01025"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSFIK"	"[K].sLYSFIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"658.40503"	"1315.80278"	"1315.80260"	"0.14"	"0.00009"	"12/54"	"12"	"54"	"8163301.52246094"	"HCD"	"MS2"	"4.703407"	"647.0"	"100.000"	"55.0857"	"16950"	"16950"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"902.0"	""	"1001.6"	""	"1047.4"	""	"1014.1"	""	"1071.7"	"1083.5"	""	"580"	"35"	"34.000"	"27.000"	"0.00830611611272908"	""	"0.0005564"	"0.00343"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSFIK"	"[K].sLYSFIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"658.40576"	"1315.80425"	"1315.80260"	"1.26"	"0.00083"	"12/54"	"12"	"54"	"2370360.70935059"	"HCD"	"MS2"	"13.19002"	"203.1"	"100.000"	"55.7878"	"17183"	"17183"	"17163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"286.9"	""	"311.7"	""	"303.1"	""	"295.2"	""	"361.7"	"364.4"	""	"577"	"36"	"34.000"	"27.000"	"0.00673202650968069"	""	"0.0005564"	"0.003387"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSNLPTVK"	"[R].vSNLPTVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904; P46418"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"658.42047"	"1315.83367"	"1315.83496"	"-0.98"	"-0.00065"	"7/74"	"7"	"74"	"3277352.41601563"	"HCD"	"MS2"	"18.60536"	"247.0"	"100.000"	"38.3901"	"10117"	"10117"	"10087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.6"	""	"319.0"	""	"359.5"	""	"437.0"	"4.7"	"412.2"	"474.5"	""	"426"	"49"	"33.000"	"26.000"	"0.000272508217785553"	"20"	"0.0001889"	"0.0004002"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSNLPTVK"	"[R].vSNLPTVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904; P46418"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"439.28281"	"1315.83387"	"1315.83496"	"-0.83"	"-0.00036"	"9/74"	"9"	"74"	"18100178.906189"	"HCD"	"MS2"	"22.77053"	"561.3"	"74.411"	"38.1899"	"10078"	"10078"	"10049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"747.1"	""	"698.7"	""	"796.7"	""	"1041.8"	""	"924.5"	"1112.7"	""	"427"	"24"	"33.000"	"26.000"	"0.0844107733845453"	"14"	"0.001217"	"0.01856"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVGLGLVK"	"[K].gDVGLGLVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"658.42065"	"1315.83403"	"1315.83496"	"-0.70"	"-0.00046"	"8/64"	"8"	"64"	"4032779.99530029"	"HCD"	"MS2"	"0"	"309.0"	"100.000"	"45.5448"	"13078"	"13078"	"13051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"386.8"	""	"348.0"	""	"375.4"	""	"577.5"	""	"639.2"	"609.6"	""	"427"	"22"	"33.000"	"26.000"	"0.140409948275382"	""	"0.0001889"	"0.0004951"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSNLPTVK"	"[R].vSNLPTVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904; P46418"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"658.42072"	"1315.83415"	"1315.83496"	"-0.61"	"-0.00040"	"14/74"	"14"	"74"	"4185251.85180664"	"HCD"	"MS2"	"9.120435"	"273.1"	"86.056"	"38.4533"	"10186"	"10186"	"10161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"391.3"	""	"338.4"	""	"390.6"	""	"492.1"	"4.8"	"454.6"	"514.2"	""	"427"	"48"	"33.000"	"26.000"	"0.000343872843110561"	"21"	"0.0001889"	"0.0004312"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSNLPTVK"	"[R].vSNLPTVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904; P46418"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"658.42084"	"1315.83440"	"1315.83496"	"-0.43"	"-0.00028"	"14/74"	"14"	"74"	"52048230.0817871"	"HCD"	"MS2"	"7.51391"	"1663.5"	"51.012"	"38.1327"	"10054"	"10054"	"10033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2273.4"	""	"2066.5"	""	"2323.8"	""	"3167.7"	""	"2716.3"	"3214.6"	""	"427"	"50"	"33.000"	"26.000"	"0.000191160377444839"	"24"	"0.0003839"	"0.001726"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSNLPTVK"	"[R].vSNLPTVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904; P46418"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"439.28305"	"1315.83460"	"1315.83496"	"-0.27"	"-0.00012"	"9/74"	"9"	"74"	"17050790.9244385"	"HCD"	"MS2"	"14.09442"	"629.2"	"92.519"	"38.0761"	"9988"	"9988"	"9959"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"820.4"	""	"789.7"	""	"895.3"	""	"1183.8"	""	"1066.1"	"1205.6"	""	"425"	"27"	"33.000"	"26.000"	"0.0425950305815097"	"17"	"0.001217"	"0.01648"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSNLPTVK"	"[R].vSNLPTVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904; P46418"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"658.42096"	"1315.83464"	"1315.83496"	"-0.24"	"-0.00016"	"14/74"	"14"	"74"	"69886234.1226807"	"HCD"	"MS2"	"8.55229"	"851.7"	"30.404"	"38.0510"	"9977"	"9977"	"9959"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1170.4"	""	"1104.4"	""	"1215.4"	""	"1492.8"	""	"1427.4"	"1657.3"	""	"425"	"49"	"33.000"	"26.000"	"0.000299473869664649"	"23"	"0.0004166"	"0.00229"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVGLGLVK"	"[K].gDVGLGLVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"658.42126"	"1315.83525"	"1315.83496"	"0.22"	"0.00015"	"8/64"	"8"	"64"	"4788294.7119751"	"HCD"	"MS2"	"11.36693"	"297.4"	"75.736"	"45.2898"	"12925"	"12925"	"12896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.4"	""	"342.9"	""	"373.1"	""	"535.5"	""	"596.3"	"618.1"	""	"423"	"41"	"33.000"	"26.000"	"0.00150768415871759"	""	"0.0001308"	"0.0003091"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIIDNVR"	"[R].kIIDNVR.[G]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"1"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"658.42535"	"1315.84343"	"1315.84619"	"-2.10"	"-0.00138"	"6/60"	"6"	"60"	"1059748.41253662"	"HCD"	"MS2"	"0"	"61.6"	"100.000"	"29.4407"	"6462"	"6462"	"6438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.3"	""	"75.4"	""	"90.1"	""	"103.3"	"1.1"	"108.5"	"107.8"	""	"308"	"18"	"31.000"	"24.000"	"0.246899790166266"	"22"	"0.001587"	"0.02103"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIIDNVR"	"[R].kIIDNVR.[G]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"1"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"658.42609"	"1315.84490"	"1315.84619"	"-0.98"	"-0.00065"	"10/60"	"10"	"60"	"1166230.41467285"	"HCD"	"MS2"	"0"	"65.2"	"100.000"	"29.4941"	"6525"	"6525"	"6500"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.4"	""	"83.8"	""	"93.4"	""	"96.5"	""	"121.8"	"112.2"	""	"306"	"20"	"31.000"	"24.000"	"0.152297028854784"	"21"	"0.001557"	"0.02078"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGQIILK"	"[R].wGQIILk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"658.42786"	"1315.84844"	"1315.85021"	"-1.35"	"-0.00089"	"12/58"	"12"	"58"	"4926165.21185303"	"HCD"	"MS2"	"10.98837"	"367.6"	"100.000"	"57.8264"	"18016"	"18016"	"17995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"620.6"	""	"517.7"	""	"540.3"	""	"563.2"	""	"605.0"	"629.2"	""	"361"	"21"	"32.000"	"25.000"	"0.139468845609774"	""	"0.0006037"	"0.005644"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGQIILK"	"[R].wGQIILk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"658.42828"	"1315.84929"	"1315.85021"	"-0.70"	"-0.00046"	"12/58"	"12"	"58"	"5871961.1182251"	"HCD"	"MS2"	"11.16278"	"396.8"	"100.000"	"58.0277"	"18152"	"18152"	"18133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"639.4"	""	"538.4"	""	"589.9"	""	"602.1"	""	"671.2"	"714.0"	""	"361"	"24"	"32.000"	"25.000"	"0.0728579934306527"	""	"0.0006037"	"0.004088"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAWDHMK"	"[R].aAWDHMk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"439.57788"	"1316.71909"	"1316.71855"	"0.41"	"0.00018"	"5/48"	"5"	"48"	"3654375.83654785"	"HCD"	"MS2"	"24.28203"	"293.1"	"100.000"	"32.3208"	"7682"	"7682"	"7657"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"435.8"	""	"436.6"	""	"448.4"	""	"412.9"	"5.6"	"515.4"	"520.2"	""	"778"	"18"	"35.000"	"28.000"	"0.586070148746643"	"18"	"0.00103"	"0.01252"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGFGMVK"	"[K].gYGFGMVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"658.87439"	"1316.74150"	"1316.74370"	"-1.67"	"-0.00110"	"12/58"	"12"	"58"	"6014047.90710449"	"HCD"	"MS2"	"0"	"565.7"	"100.000"	"43.4841"	"12237"	"12237"	"12223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"741.7"	""	"1007.4"	""	"963.1"	""	"497.3"	""	"969.9"	"1185.7"	""	"904"	"24"	"36.000"	"29.000"	"0.1738354854845"	"21"	"0.0003571"	"0.001532"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGFGMVK"	"[K].gYGFGMVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"658.87531"	"1316.74333"	"1316.74370"	"-0.28"	"-0.00018"	"7/58"	"7"	"58"	"5855630.81738281"	"HCD"	"MS2"	"0"	"559.9"	"100.000"	"43.2452"	"12091"	"12091"	"12076"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"761.0"	""	"1006.1"	""	"976.7"	""	"471.8"	"3.4"	"964.5"	"1117.4"	""	"859"	"24"	"36.000"	"29.000"	"0.187052349747952"	"21"	"0.0001889"	"0.0008726"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAATFTK"	"[K].yGAATFTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"658.88379"	"1316.76030"	"1316.76146"	"-0.88"	"-0.00058"	"7/60"	"7"	"60"	"4704345.71069336"	"HCD"	"MS2"	"23.11119"	"409.7"	"100.000"	"37.1338"	"9601"	"9601"	"9578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"662.6"	""	"724.8"	""	"565.7"	""	"647.7"	"0.4"	"633.2"	"636.1"	""	"988"	"45"	"36.000"	"29.000"	"0.00172475315846422"	"19"	"0.0001889"	"0.0007424"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAATFTK"	"[K].yGAATFTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"658.88391"	"1316.76055"	"1316.76146"	"-0.69"	"-0.00046"	"11/60"	"11"	"60"	"5951762.15545654"	"HCD"	"MS2"	"35.08443"	"471.8"	"90.289"	"37.2090"	"9675"	"9675"	"9654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"774.7"	""	"837.8"	""	"608.0"	""	"731.1"	""	"746.5"	"762.3"	""	"988"	"35"	"36.000"	"29.000"	"0.0140840302414693"	"20"	"0.0001889"	"0.0007585"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAATFTK"	"[K].yGAATFTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"658.88446"	"1316.76164"	"1316.76146"	"0.14"	"0.00009"	"7/60"	"7"	"60"	"23289712.6585693"	"HCD"	"MS2"	"8.038612"	"1861.8"	"100.000"	"36.9039"	"9550"	"9550"	"9526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3465.6"	""	"3929.1"	""	"2294.7"	""	"2880.4"	""	"2544.0"	"2447.9"	""	"988"	"50"	"36.000"	"29.000"	"0.000535459895526475"	"21"	"0.0001889"	"0.0008876"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAATFTK"	"[K].yGAATFTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"658.88446"	"1316.76164"	"1316.76146"	"0.14"	"0.00009"	"7/60"	"7"	"60"	"24649860.8540039"	"HCD"	"MS2"	"0"	"2048.5"	"100.000"	"36.8128"	"9469"	"9469"	"9450"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3770.0"	""	"4300.2"	""	"2544.0"	""	"3168.9"	""	"2813.2"	"2725.3"	""	"988"	"48"	"36.000"	"29.000"	"0.000821725849282864"	"20"	"0.0003146"	"0.001411"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"658.89496"	"1316.78264"	"1316.78259"	"0.04"	"0.00003"	"6/66"	"6"	"66"	"7690618.03417969"	"HCD"	"MS2"	"59.26217"	"499.1"	"71.762"	"35.3500"	"8912"	"8912"	"8890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"751.3"	""	"596.9"	""	"660.9"	""	"816.1"	""	"966.3"	"951.1"	""	"832"	"6"	"36.000"	"29.000"	"11.4575914058868"	"16"	"0.0006737"	"0.006661"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIQQGTIK"	"[K].aIQQGTIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"658.91827"	"1316.82927"	"1316.83021"	"-0.71"	"-0.00047"	"14/66"	"14"	"66"	"1067301.5670166"	"HCD"	"MS2"	"0"	"86.2"	"100.000"	"31.5253"	"7356"	"7356"	"7327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.9"	""	"128.9"	""	"121.4"	""	"132.8"	"0.4"	"149.4"	"156.6"	""	"665"	"52"	"35.000"	"28.000"	"0.000196694243363345"	""	"0"	"0.0001318"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIQQGTIK"	"[K].aIQQGTIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"658.91888"	"1316.83049"	"1316.83021"	"0.22"	"0.00014"	"14/66"	"14"	"66"	"955525.425354004"	"HCD"	"MS2"	"0"	"80.7"	"100.000"	"31.4108"	"7267"	"7267"	"7238"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.8"	""	"115.8"	""	"120.0"	""	"121.7"	"0.6"	"143.7"	"136.5"	""	"655"	"48"	"35.000"	"28.000"	"0.00056132101820901"	"26"	"7.476E-05"	"0.0001987"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLYPAPLK"	"[K].gLYPAPLk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"658.92078"	"1316.83428"	"1316.83423"	"0.04"	"0.00002"	"9/58"	"9"	"58"	"20357395.6799316"	"HCD"	"MS2"	"32.57941"	"603.6"	"36.257"	"42.6599"	"11861"	"11861"	"11836"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"823.5"	""	"887.3"	""	"895.3"	""	"879.4"	""	"1144.8"	"1100.7"	""	"615"	"20"	"34.000"	"27.000"	"0.340286813573133"	"21"	"0.00103"	"0.01218"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSELLR"	"[K].kLSELLR.[Y]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"439.62665"	"1316.86539"	"1316.86659"	"-0.91"	"-0.00040"	"4/62"	"4"	"62"	"24445590.3724365"	"HCD"	"MS2"	"22.54491"	"536.8"	"35.726"	"38.4464"	"10183"	"10183"	"10161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"815.1"	""	"740.5"	""	"773.7"	""	"892.9"	""	"918.7"	"944.8"	""	"361"	"2"	"32.000"	"25.000"	"10.4346336556732"	"13"	"0.001686"	"0.02323"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSELLR"	"[K].kLSELLR.[Y]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"439.62683"	"1316.86594"	"1316.86659"	"-0.50"	"-0.00022"	"4/62"	"4"	"62"	"24635306.7885742"	"HCD"	"MS2"	"22.27557"	"805.6"	"54.028"	"38.3305"	"10092"	"10092"	"10071"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1233.3"	""	"1096.1"	""	"1217.6"	""	"1274.5"	""	"1412.1"	"1394.4"	""	"362"	"3"	"32.000"	"25.000"	"10.1316125870615"	"13"	"0.003762"	"0.08769"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPVVFR"	"[K].kIPVVFR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"439.63168"	"1316.88050"	"1316.88185"	"-1.03"	"-0.00045"	"5/62"	"5"	"62"	"58163259.074707"	"HCD"	"MS2"	"5.81157"	"409.3"	"13.858"	"38.8666"	"10312"	"10312"	"10294"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"633.8"	""	"629.4"	""	"634.0"	""	"608.2"	""	"679.1"	"689.1"	""	"228"	"6"	"30.000"	"23.000"	"2.62969179514088"	"13"	"0.002424"	"0.03596"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPVVFR"	"[K].kIPVVFR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"439.63187"	"1316.88105"	"1316.88185"	"-0.61"	"-0.00027"	"5/62"	"5"	"62"	"61478719.6740723"	"HCD"	"MS2"	"8.062083"	"603.7"	"19.245"	"38.9779"	"10401"	"10401"	"10382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"913.0"	""	"908.7"	""	"949.9"	""	"921.0"	""	"1017.7"	"1000.9"	""	"230"	"8"	"30.000"	"23.000"	"1.81008029413615"	"13"	"0.001966"	"0.0303"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMAINGK"	"[R].iLMAINGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"659.41974"	"1317.83220"	"1317.83285"	"-0.49"	"-0.00032"	"12/62"	"12"	"62"	"2500044.3805542"	"HCD"	"MS2"	"0"	"197.8"	"100.000"	"50.4889"	"15088"	"15088"	"15064"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.4"	""	"272.9"	""	"316.4"	""	"294.8"	"0.9"	"328.7"	"371.4"	""	"596"	"28"	"34.000"	"27.000"	"0.043874912572495"	"27"	"0.0001889"	"0.0004699"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMAINGK"	"[R].iLMAINGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"659.42084"	"1317.83440"	"1317.83285"	"1.18"	"0.00077"	"12/62"	"12"	"62"	"2934712.75164795"	"HCD"	"MS2"	"0"	"234.3"	"100.000"	"50.3479"	"14980"	"14980"	"14964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"318.5"	""	"334.8"	""	"375.7"	""	"376.6"	"5.3"	"407.0"	"399.3"	""	"576"	"28"	"34.000"	"27.000"	"0.0434903084399275"	""	"0.0001889"	"0.0009102"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLELLPK"	"[K].fLELLPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.0800"	"0.0000"	"1"	"1"	"1"	"439.95593"	"1317.85324"	"1317.85463"	"-1.05"	"-0.00046"	"5/48"	"5"	"48"	"4419226.2354126"	"HCD"	"MS2"	"0"	"153.0"	"100.000"	"68.4219"	"22382"	"22382"	"22362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"201.2"	""	"187.5"	""	"196.8"	""	"244.9"	"0.1"	"300.5"	"321.0"	""	"303"	"25"	"31.000"	"24.000"	"0.0502820103192205"	""	"0.001587"	"0.02095"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLELLPK"	"[K].fLELLPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"659.43036"	"1317.85344"	"1317.85463"	"-0.90"	"-0.00059"	"10/48"	"10"	"48"	"2899885.90045166"	"HCD"	"MS2"	"12.02387"	"176.3"	"100.000"	"68.6589"	"22479"	"22479"	"22458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.5"	""	"225.5"	""	"242.9"	""	"288.3"	"3.8"	"332.8"	"343.8"	""	"303"	"25"	"31.000"	"24.000"	"0.0490244390248387"	"23"	"0.0006037"	"0.004508"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLELLPK"	"[K].fLELLPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.0870"	"0.0000"	"1"	"1"	"1"	"439.95605"	"1317.85361"	"1317.85463"	"-0.77"	"-0.00034"	"5/48"	"5"	"48"	"2238369.6340332"	"HCD"	"MS2"	"8.531316"	"83.9"	"100.000"	"68.1239"	"22261"	"22261"	"22234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.0"	""	"109.0"	""	"105.1"	""	"151.4"	"1.7"	"149.6"	"165.7"	""	"303"	"23"	"31.000"	"24.000"	"0.0846082345026299"	""	"0.0008731"	"0.009556"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLELLPK"	"[K].fLELLPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"659.43054"	"1317.85381"	"1317.85463"	"-0.62"	"-0.00041"	"4/48"	"4"	"48"	"7458427.0333252"	"HCD"	"MS2"	"17.50046"	"403.0"	"91.491"	"68.4640"	"22348"	"22348"	"22330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"535.5"	""	"476.1"	""	"502.1"	""	"675.0"	""	"787.5"	"853.6"	""	"303"	"23"	"31.000"	"24.000"	"0.0819242799262555"	"23"	"0.001058"	"0.01421"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLELLPK"	"[K].fLELLPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.0870"	"0.0000"	"1"	"1"	"1"	"439.95615"	"1317.85389"	"1317.85463"	"-0.57"	"-0.00025"	"5/48"	"5"	"48"	"4256231.64807129"	"HCD"	"MS2"	"3.551111"	"158.8"	"100.000"	"68.5084"	"22366"	"22366"	"22346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"213.7"	""	"205.1"	""	"200.4"	""	"260.4"	"0.3"	"298.1"	"327.9"	""	"303"	"23"	"31.000"	"24.000"	"0.0846082345026299"	""	"0.003107"	"0.06094"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLELLPK"	"[K].fLELLPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.2778"	"0.0000"	"1"	"1"	"1"	"439.95618"	"1317.85398"	"1317.85463"	"-0.50"	"-0.00022"	"6/48"	"6"	"48"	"2163383.38702393"	"HCD"	"MS2"	"3.652272"	"86.3"	"100.000"	"68.2151"	"22247"	"22247"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.5"	""	"107.9"	""	"105.9"	""	"145.5"	""	"159.4"	"180.7"	""	"303"	"18"	"31.000"	"24.000"	"0.215482811249107"	""	"0.001454"	"0.02004"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLELLPK"	"[K].fLELLPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"659.43079"	"1317.85430"	"1317.85463"	"-0.25"	"-0.00017"	"10/48"	"10"	"48"	"7426249.50610352"	"HCD"	"MS2"	"16.12485"	"441.4"	"100.000"	"68.3339"	"22347"	"22347"	"22330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"575.2"	""	"554.5"	""	"567.8"	""	"767.5"	"7.0"	"840.0"	"874.6"	""	"309"	"25"	"31.000"	"24.000"	"0.0479654456365831"	"23"	"0.0008453"	"0.008141"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLELLPK"	"[K].fLELLPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"659.43121"	"1317.85515"	"1317.85463"	"0.39"	"0.00026"	"10/48"	"10"	"48"	"2553073.81652832"	"HCD"	"MS2"	"3.614314"	"162.7"	"100.000"	"68.7800"	"22477"	"22477"	"22458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.7"	""	"203.8"	""	"216.1"	""	"272.1"	"0.7"	"325.9"	"328.2"	""	"309"	"27"	"31.000"	"24.000"	"0.0303339162771169"	"24"	"0.0006037"	"0.005102"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYMLFGSDR"	"[K].tYMLFGSDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"659.83624"	"1318.66521"	"1318.66629"	"-0.82"	"-0.00054"	"7/78"	"7"	"78"	"2422946.87841797"	"HCD"	"MS2"	"34.59513"	"198.9"	"100.000"	"46.7941"	"13584"	"13584"	"13554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.5"	""	"301.2"	""	"298.3"	""	"227.4"	""	"331.9"	"367.8"	""	"640"	"20"	"35.000"	"28.000"	"0.307008202085098"	"14"	"0.0002277"	"0.001177"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYMLFGSDR"	"[K].tYMLFGSDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"659.83704"	"1318.66680"	"1318.66629"	"0.38"	"0.00025"	"7/78"	"7"	"78"	"2253181.83898926"	"HCD"	"MS2"	"30.84247"	"175.6"	"100.000"	"46.5253"	"13426"	"13426"	"13400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"313.9"	""	"262.5"	""	"272.4"	""	"202.3"	"0.5"	"289.0"	"319.6"	""	"644"	"25"	"35.000"	"28.000"	"0.0943747624970603"	"18"	"0.0001889"	"0.0005466"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANPFPAAVR"	"[K].fANPFPAAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"659.87622"	"1318.74516"	"1318.74692"	"-1.33"	"-0.00088"	"7/88"	"7"	"88"	"4476361.11712646"	"HCD"	"MS2"	"8.694207"	"232.8"	"100.000"	"48.9693"	"14426"	"14426"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"338.9"	""	"318.7"	""	"330.6"	""	"357.7"	"3.0"	"422.8"	"433.9"	""	"948"	"44"	"36.000"	"29.000"	"0.00170521184863822"	"18"	"0.0001889"	"0.0005676"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANPFPAAVR"	"[K].fANPFPAAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"659.87671"	"1318.74614"	"1318.74692"	"-0.59"	"-0.00039"	"7/88"	"7"	"88"	"3476950.00891113"	"HCD"	"MS2"	"4.348277"	"248.0"	"100.000"	"49.5182"	"14694"	"14694"	"14670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"340.6"	""	"349.6"	""	"332.4"	""	"391.5"	"19.9"	"458.9"	"457.6"	""	"947"	"42"	"36.000"	"29.000"	"0.00306422028556954"	"25"	"0.0001889"	"0.0005884"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANPFPAAVR"	"[K].fANPFPAAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"659.87756"	"1318.74785"	"1318.74692"	"0.70"	"0.00046"	"9/88"	"9"	"88"	"3638398.03662109"	"HCD"	"MS2"	"59.68287"	"213.4"	"100.000"	"49.2098"	"14572"	"14572"	"14542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"304.8"	""	"274.8"	""	"286.4"	""	"342.9"	""	"400.4"	"415.2"	""	"998"	"26"	"36.000"	"29.000"	"0.125921690546781"	"21"	"0.0001889"	"0.0007422"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDLEGK"	"[K].iWDLEGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"659.89124"	"1318.77519"	"1318.77711"	"-1.45"	"-0.00096"	"7/52"	"7"	"52"	"3164431.79864502"	"HCD"	"MS2"	"0"	"270.7"	"100.000"	"53.2715"	"16168"	"16168"	"16160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.7"	""	"335.2"	""	"342.0"	""	"440.6"	""	"528.9"	"534.8"	""	"931"	"25"	"36.000"	"29.000"	"0.162151020149264"	"27"	"0.0004557"	"0.002574"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDLEGK"	"[K].iWDLEGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"659.89154"	"1318.77580"	"1318.77711"	"-0.99"	"-0.00065"	"7/52"	"7"	"52"	"12595223.2772827"	"HCD"	"MS2"	"49.6049"	"884.1"	"88.607"	"52.9837"	"16058"	"16058"	"16034"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1282.7"	""	"1113.7"	""	"1149.7"	""	"1476.5"	"2.3"	"1652.6"	"1702.5"	""	"924"	"25"	"36.000"	"29.000"	"0.153335239389306"	"27"	"0.0006037"	"0.005491"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDLEGK"	"[K].iWDLEGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"659.89172"	"1318.77617"	"1318.77711"	"-0.71"	"-0.00047"	"7/52"	"7"	"52"	"14911338.9949341"	"HCD"	"MS2"	"69.35839"	"854.2"	"74.937"	"53.1433"	"16173"	"16173"	"16150"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1223.4"	""	"1082.2"	""	"1088.5"	""	"1450.0"	"1.9"	"1627.9"	"1624.3"	""	"924"	"25"	"36.000"	"29.000"	"0.163546771580547"	"28"	"0.0009727"	"0.0104"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLLFLAER"	"[R].dLLLFLAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"659.89960"	"1318.79192"	"1318.79320"	"-0.98"	"-0.00064"	"7/78"	"7"	"78"	"1054230.60369873"	"HCD"	"MS2"	"22.54739"	"57.4"	"100.000"	"78.3354"	"26417"	"26417"	"26399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.0"	""	"91.3"	""	"88.4"	""	"93.0"	"0.7"	"92.0"	"102.1"	""	"854"	"41"	"36.000"	"29.000"	"0.00356802488784743"	"22"	"0"	"0.0001222"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLLFLAER"	"[R].dLLLFLAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"659.89996"	"1318.79265"	"1318.79320"	"-0.42"	"-0.00028"	"7/78"	"7"	"78"	"1122903.55352783"	"HCD"	"MS2"	"20.08701"	"59.9"	"100.000"	"78.3527"	"26373"	"26373"	"26353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.6"	""	"96.2"	""	"84.9"	""	"97.2"	"2.8"	"96.3"	"104.0"	""	"854"	"42"	"36.000"	"29.000"	"0.0024290020147032"	"24"	"0"	"7.062E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIAQLNSK"	"[K].sIAQLNSk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"659.90778"	"1318.80828"	"1318.80947"	"-0.91"	"-0.00060"	"7/76"	"7"	"76"	"2482024.00842285"	"HCD"	"MS2"	"35.08505"	"200.8"	"100.000"	"34.6160"	"8611"	"8611"	"8586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.7"	""	"221.5"	""	"239.7"	""	"371.9"	""	"434.6"	"421.9"	""	"733"	"31"	"35.000"	"28.000"	"0.0283840248894623"	"20"	"0.0001889"	"0.0005157"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGSATVGLK"	"[K].qGSATVGLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.6226"	"0.0000"	"1"	"1"	"1"	"659.90857"	"1318.80986"	"1318.80947"	"0.30"	"0.00020"	"8/84"	"8"	"84"	"381591.800415039"	"HCD"	"MS2"	"27.45179"	"39.9"	"100.000"	"31.3737"	"7294"	"7294"	"7264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.4"	""	"49.9"	""	"47.1"	""	"65.6"	"0.5"	"75.0"	"72.3"	""	"707"	"53"	"35.000"	"28.000"	"0.000167258970042883"	""	"0.0001308"	"0.0002521"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAMTIAK"	"[K].iPAmTIAk.[N]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"659.91083"	"1318.81438"	"1318.81687"	"-1.89"	"-0.00124"	"5/56"	"5"	"56"	"12762948.3989868"	"HCD"	"MS2"	"8.993296"	"405.4"	"74.129"	"37.2685"	"9699"	"9699"	"9686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"487.4"	"3.4"	"563.8"	""	"637.1"	""	"962.8"	""	"617.2"	"561.6"	""	"662"	"22"	"35.000"	"28.000"	"0.216684573616268"	"14"	"0.000523"	"0.003151"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAMTIAK"	"[K].iPAmTIAk.[N]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"659.91107"	"1318.81487"	"1318.81687"	"-1.52"	"-0.00100"	"5/56"	"5"	"56"	"9710486.85943604"	"HCD"	"MS2"	"0"	"375.4"	"89.974"	"37.1956"	"9626"	"9626"	"9608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.0"	"3.9"	"493.4"	""	"586.9"	""	"875.5"	"4.8"	"600.1"	"555.9"	""	"673"	"24"	"35.000"	"28.000"	"0.142227988700375"	"14"	"0.0004557"	"0.002573"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVLVGDVK"	"[R].mVLVGDVk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3;Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3; Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"0"	"2"	"2"	"0.5306"	"0.0000"	"1"	"1"	"1"	"659.91205"	"1318.81682"	"1318.81687"	"-0.03"	"-0.00002"	"14/56"	"14"	"56"	"4862840.23742676"	"HCD"	"MS2"	"0"	"370.4"	"100.000"	"46.3078"	"13385"	"13385"	"13360"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"611.9"	""	"522.9"	""	"621.7"	""	"401.5"	"4.0"	"655.0"	"688.3"	""	"645"	"49"	"35.000"	"28.000"	"0.000424160008381997"	""	"0.0001889"	"0.0004002"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVLVGDVK"	"[R].mVLVGDVk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3;Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3; Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"659.91241"	"1318.81755"	"1318.81687"	"0.52"	"0.00034"	"7/56"	"7"	"56"	"1907330.7432251"	"HCD"	"MS2"	"0"	"156.3"	"100.000"	"46.7184"	"13553"	"13553"	"13522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.3"	""	"245.1"	""	"236.1"	""	"190.6"	""	"270.8"	"284.3"	""	"642"	"10"	"35.000"	"28.000"	"3.25465554821474"	"14"	"0.0001889"	"0.0009801"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVLVGDVK"	"[R].mVLVGDVk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3;Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3; Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"0"	"2"	"2"	"0.5098"	"0.0000"	"1"	"1"	"1"	"659.91254"	"1318.81780"	"1318.81687"	"0.71"	"0.00047"	"14/56"	"14"	"56"	"5253155.88128662"	"HCD"	"MS2"	"21.26148"	"396.7"	"100.000"	"46.0965"	"13250"	"13250"	"13229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"666.6"	""	"577.6"	""	"636.6"	""	"411.5"	"0.3"	"700.4"	"761.2"	""	"642"	"51"	"35.000"	"28.000"	"0.000240162409664081"	""	"0.0001889"	"0.0004442"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVLVGDVK"	"[R].mVLVGDVk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3;Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"P09330; P60892"	"Ribose-phosphate pyrophosphokinase 2 OS=Rattus norvegicus OX=10116 GN=Prps2 PE=1 SV=3; Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"659.91272"	"1318.81816"	"1318.81687"	"0.98"	"0.00065"	"6/56"	"6"	"56"	"1586829.30474854"	"HCD"	"MS2"	"0"	"135.6"	"100.000"	"46.4080"	"13378"	"13378"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.3"	""	"184.0"	""	"213.6"	""	"169.7"	"0.1"	"237.6"	"270.1"	""	"632"	"27"	"34.000"	"28.000"	"0.0613319937319317"	""	"0.0001889"	"0.0005122"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDTALSK"	"[K].iLDTALSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19356"	"Porphobilinogen deaminase OS=Rattus norvegicus OX=10116 GN=Hmbs PE=1 SV=2"	"P19356"	"Porphobilinogen deaminase OS=Rattus norvegicus OX=10116 GN=Hmbs PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"659.92096"	"1318.83464"	"1318.83462"	"0.01"	"0.00001"	"7/64"	"7"	"64"	"1796249.02404785"	"HCD"	"MS2"	"0"	"173.8"	"100.000"	"48.0113"	"14034"	"14034"	"14006"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.1"	""	"219.1"	""	"226.4"	""	"276.5"	""	"353.5"	"357.6"	""	"489"	"21"	"33.000"	"26.000"	"0.20196627867162"	"20"	"0.0001889"	"0.001055"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDTALSK"	"[K].iLDTALSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19356"	"Porphobilinogen deaminase OS=Rattus norvegicus OX=10116 GN=Hmbs PE=1 SV=2"	"P19356"	"Porphobilinogen deaminase OS=Rattus norvegicus OX=10116 GN=Hmbs PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"659.92181"	"1318.83635"	"1318.83462"	"1.31"	"0.00086"	"6/64"	"6"	"64"	"1527689.67987061"	"HCD"	"MS2"	"0"	"148.8"	"100.000"	"48.3391"	"14215"	"14215"	"14197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.7"	""	"191.9"	""	"203.6"	""	"229.9"	"5.0"	"286.2"	"303.0"	""	"363"	"30"	"32.000"	"25.000"	"0.0198096421065449"	""	"0.0001889"	"0.0005461"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFVSPLAK"	"[R].vFVSPLAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"659.92767"	"1318.84807"	"1318.84988"	"-1.37"	"-0.00090"	"12/56"	"12"	"56"	"9055443.66851807"	"HCD"	"MS2"	"0"	"410.5"	"69.008"	"50.1179"	"14938"	"14938"	"14919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"528.2"	""	"489.4"	""	"533.2"	""	"700.8"	"3.9"	"791.2"	"848.2"	""	"259"	"36"	"31.000"	"24.000"	"0.00309221561137257"	"23"	"0.0002277"	"0.001349"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFVGSIPK"	"[R].lFVGSIPk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"3"	"3"	"0.6053"	"0.0000"	"1"	"1"	"1"	"440.28775"	"1318.84870"	"1318.84988"	"-0.90"	"-0.00039"	"6/56"	"6"	"56"	"12016406.6959229"	"HCD"	"MS2"	"16.40501"	"461.9"	"100.000"	"53.0399"	"16131"	"16131"	"16102"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"590.7"	"8.1"	"544.4"	""	"531.4"	""	"849.0"	""	"928.3"	"940.2"	""	"259"	"38"	"31.000"	"24.000"	"0.00224527617709161"	""	"0.0004166"	"0.002482"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFVGSIPK"	"[R].lFVGSIPk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"440.28778"	"1318.84879"	"1318.84988"	"-0.83"	"-0.00036"	"7/56"	"7"	"56"	"10378635.5505981"	"HCD"	"MS2"	"24.60094"	"400.2"	"100.000"	"52.8669"	"16010"	"16010"	"15986"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"480.7"	"9.5"	"455.2"	""	"497.6"	""	"725.2"	""	"813.9"	"819.1"	""	"259"	"27"	"31.000"	"24.000"	"0.0287256436364128"	""	"0.00103"	"0.01208"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFVSPLAK"	"[R].vFVSPLAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"659.92834"	"1318.84941"	"1318.84988"	"-0.35"	"-0.00023"	"12/56"	"12"	"56"	"9106541.09326172"	"HCD"	"MS2"	"0"	"592.1"	"100.000"	"49.8087"	"14765"	"14765"	"14751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"768.1"	""	"716.5"	""	"747.2"	""	"1006.5"	"4.2"	"1156.2"	"1219.5"	""	"259"	"36"	"31.000"	"24.000"	"0.00312082753014914"	"23"	"0.0001889"	"0.001003"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVLPYK"	"[K].iQVLPYk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"659.92841"	"1318.84953"	"1318.84988"	"-0.26"	"-0.00017"	"4/60"	"4"	"60"	"6301401.79571533"	"HCD"	"MS2"	"27.57846"	"409.7"	"100.000"	"47.4165"	"13790"	"13790"	"13768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"584.1"	""	"576.2"	""	"618.4"	""	"629.8"	""	"741.2"	"732.0"	""	"259"	"24"	"31.000"	"24.000"	"0.0513180054360794"	"24"	"0.0006396"	"0.006221"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFVGSIPK"	"[R].lFVGSIPk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"659.92841"	"1318.84953"	"1318.84988"	"-0.26"	"-0.00017"	"6/56"	"6"	"56"	"21496907.3625488"	"HCD"	"MS2"	"36.73342"	"1220.8"	"100.000"	"53.0143"	"16120"	"16120"	"16102"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1588.2"	""	"1478.4"	""	"1441.9"	""	"2174.5"	"3.9"	"2436.6"	"2462.7"	""	"259"	"31"	"31.000"	"24.000"	"0.0104536936417225"	""	"0.0004557"	"0.002597"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVLPYK"	"[K].iQVLPYk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"659.92883"	"1318.85039"	"1318.84988"	"0.39"	"0.00025"	"4/60"	"4"	"60"	"6515708.28594971"	"HCD"	"MS2"	"29.90464"	"425.9"	"100.000"	"47.6711"	"13942"	"13942"	"13922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"614.7"	""	"598.4"	""	"639.2"	""	"668.6"	"0.1"	"746.0"	"764.7"	""	"259"	"24"	"31.000"	"24.000"	"0.052634411126895"	""	"0.0007076"	"0.007144"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFVGSIPK"	"[R].lFVGSIPk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"659.92896"	"1318.85063"	"1318.84988"	"0.57"	"0.00038"	"11/56"	"11"	"56"	"20608739.1635742"	"HCD"	"MS2"	"38.11985"	"1267.7"	"100.000"	"52.8208"	"15991"	"15991"	"15970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1653.8"	""	"1505.2"	""	"1468.4"	""	"2236.7"	"14.7"	"2535.3"	"2619.3"	""	"259"	"25"	"31.000"	"24.000"	"0.0379550675259917"	""	"0.0008731"	"0.008808"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEAFDLLR"	"[K].iNEAFDLLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"660.37866"	"1319.75005"	"1319.75207"	"-1.53"	"-0.00101"	"11/84"	"11"	"84"	"4703717.5847168"	"HCD"	"MS2"	"11.07126"	"240.8"	"100.000"	"63.5908"	"20366"	"20366"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"442.8"	""	"367.3"	""	"367.0"	""	"358.5"	"0.1"	"349.9"	"388.0"	""	"1021"	"43"	"37.000"	"30.000"	"0.00242100533475355"	"30"	"0.0001308"	"0.0002424"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"660.37909"	"1319.75090"	"1319.75207"	"-0.88"	"-0.00058"	"7/86"	"7"	"86"	"4280046.91320801"	"HCD"	"MS2"	"54.48387"	"271.9"	"100.000"	"38.8884"	"10365"	"10365"	"10334"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"339.7"	""	"359.0"	""	"372.0"	""	"457.6"	""	"539.2"	"511.5"	""	"1028"	"38"	"37.000"	"30.000"	"0.00849108364289714"	"24"	"0.001587"	"0.02131"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEAFDLLR"	"[K].iNEAFDLLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"660.37946"	"1319.75163"	"1319.75207"	"-0.33"	"-0.00022"	"11/84"	"11"	"84"	"7035950.05963135"	"HCD"	"MS2"	"4.869761"	"307.0"	"100.000"	"63.7156"	"20470"	"20470"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"530.9"	""	"477.8"	""	"476.7"	""	"454.0"	""	"458.2"	"506.0"	""	"1020"	"39"	"37.000"	"30.000"	"0.00620254860329648"	"25"	"0.0001308"	"0.0002745"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFVTHTK"	"[R].eFVTHTk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"660.38892"	"1319.77056"	"1319.77236"	"-1.37"	"-0.00090"	"5/58"	"5"	"58"	"165158.707397461"	"HCD"	"MS2"	"41.10833"	"19.2"	"100.000"	"27.6875"	"5823"	"5823"	"5794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.8"	""	"24.3"	""	"22.1"	""	"34.7"	""	"33.4"	"39.9"	""	"933"	"3"	"36.000"	"29.000"	"21.719591262846"	"15"	"0.004167"	"0.1066"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSIWDGK"	"[K].gVSIWDGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"660.38916"	"1319.77104"	"1319.77236"	"-1.00"	"-0.00066"	"11/62"	"11"	"62"	"8354349.02716064"	"HCD"	"MS2"	"21.83045"	"534.8"	"78.805"	"43.6558"	"12307"	"12307"	"12287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"767.0"	""	"801.8"	""	"838.6"	""	"795.4"	""	"929.6"	"930.5"	""	"920"	"32"	"36.000"	"29.000"	"0.0296317862136981"	"27"	"0.0001889"	"0.0009799"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSIWDGK"	"[K].gVSIWDGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"660.38947"	"1319.77165"	"1319.77236"	"-0.53"	"-0.00035"	"11/62"	"11"	"62"	"5953348.85430908"	"HCD"	"MS2"	"42.83116"	"428.2"	"89.749"	"43.4607"	"12179"	"12179"	"12159"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"562.9"	""	"601.3"	""	"655.5"	""	"664.8"	""	"790.6"	"785.9"	""	"926"	"32"	"36.000"	"29.000"	"0.0304495578695559"	"27"	"0.0001889"	"0.000739"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSIWDGK"	"[K].gVSIWDGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"660.39063"	"1319.77397"	"1319.77236"	"1.22"	"0.00081"	"7/62"	"7"	"62"	"2166754.86315918"	"HCD"	"MS2"	"0"	"194.4"	"100.000"	"44.0155"	"12454"	"12454"	"12431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.6"	""	"265.5"	""	"279.6"	""	"307.1"	"9.6"	"352.3"	"358.2"	""	"906"	"32"	"36.000"	"29.000"	"0.0272331703079925"	"28"	"0.0001889"	"0.0007324"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDQNLK"	"[R].lMDQNLk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"660.39087"	"1319.77446"	"1319.77573"	"-0.96"	"-0.00063"	"5/54"	"5"	"54"	"8727644.16033936"	"HCD"	"MS2"	"3.027518"	"684.1"	"100.000"	"38.6422"	"10220"	"10220"	"10198"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1068.1"	""	"977.6"	""	"989.9"	""	"826.7"	""	"1302.2"	"1327.1"	""	"886"	"17"	"36.000"	"29.000"	"0.934122270420447"	"25"	"0.001158"	"0.01538"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAVFISDIR"	"[R].gLAVFISDIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"660.39758"	"1319.78789"	"1319.78845"	"-0.43"	"-0.00028"	"6/74"	"6"	"74"	"4825596.72753906"	"HCD"	"MS2"	"12.39385"	"188.2"	"100.000"	"66.2630"	"21510"	"21510"	"21491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.5"	""	"290.8"	""	"256.9"	""	"284.0"	""	"317.7"	"355.4"	""	"825"	"51"	"36.000"	"29.000"	"0.000347075495928643"	"25"	"0"	"8.719E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAVFISDIR"	"[R].gLAVFISDIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"660.39783"	"1319.78838"	"1319.78845"	"-0.06"	"-0.00004"	"6/74"	"6"	"74"	"4605571.04663086"	"HCD"	"MS2"	"12.37053"	"180.1"	"100.000"	"66.2891"	"21468"	"21468"	"21449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.0"	""	"270.2"	""	"262.7"	""	"288.6"	""	"304.8"	"335.7"	""	"809"	"47"	"36.000"	"29.000"	"0.000744592274594192"	"24"	"0"	"5.346E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLGDVVLTAR"	"[K].fLGDVVLTAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"660.39850"	"1319.78972"	"1319.78845"	"0.96"	"0.00063"	"6/80"	"6"	"80"	"6727582.55224609"	"HCD"	"MS2"	"15.54715"	"290.4"	"100.000"	"58.6651"	"18409"	"18409"	"18389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"367.4"	""	"373.2"	""	"440.6"	""	"513.4"	"1.8"	"523.6"	"531.4"	""	"793"	"44"	"35.000"	"28.000"	"0.00155325654273236"	"25"	"0"	"0.0001001"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLGDVVLTAR"	"[K].fLGDVVLTAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"660.39886"	"1319.79045"	"1319.78845"	"1.52"	"0.00100"	"6/80"	"6"	"80"	"5298284.15966797"	"HCD"	"MS2"	"35.21884"	"260.7"	"100.000"	"58.5001"	"18292"	"18292"	"18266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.8"	""	"327.9"	""	"372.6"	""	"483.4"	""	"500.9"	"486.5"	""	"793"	"31"	"35.000"	"28.000"	"0.0338254195207974"	"24"	"0.0001308"	"0.0002088"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"660.39935"	"1319.79143"	"1319.79349"	"-1.56"	"-0.00103"	"7/76"	"7"	"76"	"4581423.793396"	"HCD"	"MS2"	"0"	"274.6"	"100.000"	"26.7244"	"5399"	"5399"	"5369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.7"	""	"293.2"	""	"302.4"	""	"617.7"	""	"573.9"	"523.2"	""	"791"	"45"	"35.000"	"28.000"	"0.00116184043735079"	"27"	"0.0001859"	"0.000344"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"660.39960"	"1319.79192"	"1319.79349"	"-1.19"	"-0.00078"	"7/76"	"7"	"76"	"3771483.32598877"	"HCD"	"MS2"	"34.38917"	"233.4"	"100.000"	"26.7944"	"5464"	"5464"	"5442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.4"	""	"236.7"	""	"274.3"	""	"535.4"	"1.7"	"459.6"	"427.8"	""	"787"	"45"	"35.000"	"28.000"	"0.00117745613450532"	"27"	"0.0001308"	"0.0002207"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"660.40027"	"1319.79326"	"1319.79349"	"-0.17"	"-0.00011"	"4/76"	"4"	"76"	"262450.708740234"	"HCD"	"MS2"	"100"	"26.0"	"100.000"	"27.0811"	"5579"	"5579"	"5563"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.5"	""	"34.3"	""	"33.6"	""	"41.1"	"0.9"	"43.5"	"36.1"	""	"755"	"6"	"35.000"	"28.000"	"10.0673914585686"	"16"	"0.002651"	"0.0392"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"660.40381"	"1319.80034"	"1319.80088"	"-0.41"	"-0.00027"	"6/50"	"6"	"50"	"4334700.34588623"	"HCD"	"MS2"	"26.98687"	"335.6"	"100.000"	"49.5571"	"14710"	"14710"	"14686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"453.7"	""	"496.7"	""	"432.5"	""	"509.5"	""	"670.1"	"621.2"	""	"680"	"19"	"35.000"	"28.000"	"0.414456463634454"	""	"0.0007793"	"0.007406"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"660.40399"	"1319.80071"	"1319.80088"	"-0.13"	"-0.00009"	"6/50"	"6"	"50"	"4182578.81573486"	"HCD"	"MS2"	"37.06921"	"339.0"	"100.000"	"49.2777"	"14552"	"14552"	"14527"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"455.7"	""	"493.8"	""	"440.9"	""	"503.6"	""	"666.7"	"656.4"	""	"668"	"18"	"35.000"	"28.000"	"0.542933284420662"	""	"0.0008125"	"0.007643"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALHFVFK"	"[R].aLHFVFk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"440.61237"	"1319.82254"	"1319.82400"	"-1.10"	"-0.00049"	"6/50"	"6"	"50"	"2519704.58953857"	"HCD"	"MS2"	"0"	"115.0"	"100.000"	"44.2565"	"12553"	"12553"	"12524"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.4"	""	"164.4"	""	"177.7"	""	"201.2"	"1.9"	"201.2"	"196.7"	""	"499"	"26"	"33.000"	"26.000"	"0.0632514593309227"	"14"	"0.0001889"	"0.0009357"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALHFVFK"	"[R].aLHFVFk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"440.61292"	"1319.82419"	"1319.82400"	"0.15"	"0.00006"	"6/50"	"6"	"50"	"3410188.47412109"	"HCD"	"MS2"	"37.69034"	"148.1"	"100.000"	"44.2109"	"12485"	"12485"	"12454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.3"	""	"200.8"	""	"228.6"	""	"252.3"	""	"276.8"	"270.4"	""	"493"	"26"	"33.000"	"26.000"	"0.0637994483585237"	"14"	"0.0002277"	"0.001136"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPDIIK"	"[K].yLPDIIk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LNI5"	"Protein phosphatase 1G OS=Rattus norvegicus OX=10116 GN=Ppm1g PE=1 SV=2"	"F1LNI5"	"Protein phosphatase 1G OS=Rattus norvegicus OX=10116 GN=Ppm1g PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"660.41919"	"1319.83110"	"1319.83390"	"-2.12"	"-0.00140"	"5/48"	"5"	"48"	"3563065.9765625"	"HCD"	"MS2"	"31.16373"	"237.9"	"100.000"	"56.1033"	"17312"	"17312"	"17291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"322.3"	""	"303.6"	""	"341.9"	""	"371.3"	""	"452.6"	"463.9"	""	"381"	"22"	"32.000"	"25.000"	"0.131490682631566"	"23"	"0.003107"	"0.0597"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPDIIK"	"[K].yLPDIIk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LNI5"	"Protein phosphatase 1G OS=Rattus norvegicus OX=10116 GN=Ppm1g PE=1 SV=2"	"F1LNI5"	"Protein phosphatase 1G OS=Rattus norvegicus OX=10116 GN=Ppm1g PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"660.41943"	"1319.83159"	"1319.83390"	"-1.75"	"-0.00115"	"5/48"	"5"	"48"	"3596554.69818115"	"HCD"	"MS2"	"34.93412"	"261.7"	"100.000"	"56.3136"	"17452"	"17452"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.2"	""	"364.7"	""	"384.2"	""	"399.2"	""	"501.7"	"481.8"	""	"381"	"22"	"32.000"	"25.000"	"0.134863671925178"	"23"	"0.004291"	"0.1133"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIIDLFK"	"[R].iIIDLFk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"660.43817"	"1319.86907"	"1319.87028"	"-0.92"	"-0.00061"	"6/48"	"6"	"48"	"1902867.33154297"	"HCD"	"MS2"	"20.84361"	"130.5"	"100.000"	"78.1957"	"26309"	"26309"	"26289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.8"	""	"157.2"	""	"159.0"	""	"256.1"	"3.2"	"247.2"	"242.6"	""	"120"	"33"	"27.000"	"20.000"	"0.00329724524314575"	"20"	"0.0003571"	"0.001502"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIIDLFK"	"[R].iIIDLFk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"660.43823"	"1319.86919"	"1319.87028"	"-0.83"	"-0.00055"	"12/48"	"12"	"48"	"2083786.01019287"	"HCD"	"MS2"	"20.24978"	"139.9"	"100.000"	"78.1808"	"26354"	"26354"	"26335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.5"	""	"165.7"	""	"175.9"	""	"260.2"	""	"255.4"	"285.6"	""	"120"	"35"	"27.000"	"20.000"	"0.00211422522625492"	""	"0.0003839"	"0.001657"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVWSEK"	"[R].tLVWSEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"660.89905"	"1320.79082"	"1320.79276"	"-1.47"	"-0.00097"	"12/58"	"12"	"58"	"22703945.2373047"	"HCD"	"MS2"	"3.822715"	"742.5"	"43.394"	"42.8292"	"11974"	"11974"	"11955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1127.7"	""	"1051.5"	""	"1082.4"	""	"1206.1"	""	"1251.4"	"1307.2"	""	"725"	"36"	"35.000"	"28.000"	"0.0087359071789889"	""	"0.00103"	"0.01218"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVWSEK"	"[R].tLVWSEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"660.89911"	"1320.79094"	"1320.79276"	"-1.38"	"-0.00091"	"12/58"	"12"	"58"	"12840615.0286865"	"HCD"	"MS2"	"10.31757"	"765.1"	"71.842"	"42.4902"	"11791"	"11791"	"11772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1194.8"	""	"1103.1"	""	"1121.4"	""	"1268.9"	""	"1249.2"	"1301.6"	""	"725"	"34"	"35.000"	"28.000"	"0.0138773969452348"	""	"0.0006037"	"0.005217"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAPEYAK"	"[K].aLAPEYAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"660.89923"	"1320.79119"	"1320.79276"	"-1.19"	"-0.00079"	"7/56"	"7"	"56"	"2094876.0914917"	"HCD"	"MS2"	"0"	"187.6"	"100.000"	"35.8202"	"9062"	"9062"	"9035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.0"	""	"230.6"	""	"275.0"	""	"292.7"	"18.0"	"338.5"	"358.3"	""	"718"	"28"	"35.000"	"28.000"	"0.0557306936574951"	"16"	"0.0007076"	"0.007113"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNVPLEK"	"[R].yNVPLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"660.89954"	"1320.79180"	"1320.79276"	"-0.73"	"-0.00048"	"6/58"	"6"	"58"	"19223121.4616089"	"HCD"	"MS2"	"0"	"987.2"	"77.205"	"39.2485"	"10512"	"10512"	"10494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2127.7"	""	"1582.6"	""	"1372.6"	""	"1772.9"	""	"1133.5"	"1310.9"	""	"718"	"33"	"35.000"	"28.000"	"0.0162965040377423"	""	"0.0007076"	"0.007002"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNVPLEK"	"[R].yNVPLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"660.90002"	"1320.79277"	"1320.79276"	"0.01"	"0.00001"	"6/58"	"6"	"58"	"15212318.5618286"	"HCD"	"MS2"	"0"	"1051.9"	"100.000"	"39.1164"	"10415"	"10415"	"10390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2295.0"	""	"1671.4"	""	"1458.2"	""	"1901.0"	""	"1252.6"	"1330.8"	""	"722"	"33"	"35.000"	"28.000"	"0.016615262306287"	""	"0.0006037"	"0.00494"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSSPLSK"	"[K].iMSSPLSk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"660.90131"	"1320.79534"	"1320.79613"	"-0.60"	"-0.00040"	"5/64"	"5"	"64"	"12030603.3151855"	"HCD"	"MS2"	"3.273917"	"609.0"	"69.423"	"41.4693"	"11376"	"11376"	"11355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"838.8"	""	"892.4"	""	"973.7"	""	"746.9"	""	"1189.6"	"1133.4"	""	"704"	"30"	"35.000"	"28.000"	"0.039132956800312"	"22"	"0.0009727"	"0.01075"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFDNLK"	"[R].lIFDNLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"6"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P09626; Q64541; P06687; P54708; P06685; P06686"	"Potassium-transporting ATPase alpha chain 1 OS=Rattus norvegicus OX=10116 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-4 OS=Rattus norvegicus OX=10116 GN=Atp1a4 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Potassium-transporting ATPase alpha chain 2 OS=Rattus norvegicus OX=10116 GN=Atp12a PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"660.91809"	"1320.82891"	"1320.82914"	"-0.18"	"-0.00012"	"6/52"	"6"	"52"	"7436808.59716797"	"HCD"	"MS2"	"8.828779"	"601.6"	"100.000"	"58.2049"	"18225"	"18225"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"562.4"	""	"653.7"	""	"646.2"	""	"1186.2"	"9.5"	"1334.9"	"1330.9"	""	"312"	"31"	"31.000"	"24.000"	"0.012738684993194"	""	"0.0006037"	"0.004902"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFDNLK"	"[R].lIFDNLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"6"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P09626; Q64541; P06687; P54708; P06685; P06686"	"Potassium-transporting ATPase alpha chain 1 OS=Rattus norvegicus OX=10116 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-4 OS=Rattus norvegicus OX=10116 GN=Atp1a4 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Potassium-transporting ATPase alpha chain 2 OS=Rattus norvegicus OX=10116 GN=Atp12a PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"660.91840"	"1320.82952"	"1320.82914"	"0.28"	"0.00019"	"6/52"	"6"	"52"	"6496420.79089355"	"HCD"	"MS2"	"13.68816"	"513.0"	"100.000"	"58.0269"	"18098"	"18098"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"467.8"	""	"571.6"	""	"567.1"	""	"982.1"	"2.3"	"1135.5"	"1154.5"	""	"312"	"29"	"31.000"	"24.000"	"0.0218335622321329"	""	"0.0006037"	"0.004918"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELNEFLTR"	"[K].aELNEFLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"661.37030"	"1321.73332"	"1321.73133"	"1.51"	"0.00100"	"7/86"	"7"	"86"	"1629508.42279053"	"HCD"	"MS2"	"0"	"149.4"	"100.000"	"48.2587"	"14183"	"14183"	"14159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.0"	""	"194.3"	""	"194.8"	""	"263.0"	"8.0"	"283.4"	"268.2"	""	"965"	"28"	"36.000"	"29.000"	"0.075770005309094"	"29"	"0.0001859"	"0.0003291"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDGLWSFR"	"[K].vLDGLWSFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"661.37677"	"1321.74626"	"1321.74659"	"-0.25"	"-0.00016"	"7/72"	"7"	"72"	"1730921.1809082"	"HCD"	"MS2"	"10.64695"	"90.0"	"100.000"	"71.8576"	"23785"	"23785"	"23769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.2"	""	"118.3"	""	"137.1"	""	"152.2"	""	"152.8"	"174.2"	""	"929"	"26"	"36.000"	"29.000"	"0.114811586535999"	"24"	"0.0001308"	"0.000245"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFPNLAFIR"	"[K].dFPNLAFIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"661.37677"	"1321.74626"	"1321.74659"	"-0.25"	"-0.00016"	"5/74"	"5"	"74"	"6743093.31158447"	"HCD"	"MS2"	"19.94722"	"307.9"	"100.000"	"63.3627"	"20326"	"20326"	"20307"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"227.6"	""	"244.9"	""	"278.2"	""	"716.5"	"2.8"	"715.1"	"750.1"	""	"929"	"25"	"36.000"	"29.000"	"0.133655156364472"	"20"	"0.0001889"	"0.0005963"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFPNLAFIR"	"[K].dFPNLAFIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"661.37683"	"1321.74639"	"1321.74659"	"-0.15"	"-0.00010"	"8/74"	"8"	"74"	"3478905.73876953"	"HCD"	"MS2"	"9.348475"	"171.3"	"100.000"	"63.0662"	"20205"	"20205"	"20179"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.5"	""	"123.8"	""	"150.2"	""	"399.0"	"2.5"	"407.1"	"414.0"	""	"979"	"33"	"36.000"	"29.000"	"0.0240299405376699"	"21"	"0.0001308"	"0.0002313"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDGLWSFR"	"[K].vLDGLWSFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"661.37695"	"1321.74663"	"1321.74659"	"0.03"	"0.00002"	"6/72"	"6"	"72"	"2106691.98327637"	"HCD"	"MS2"	"16.95302"	"108.4"	"100.000"	"71.9467"	"23770"	"23770"	"23745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.8"	""	"141.9"	""	"157.8"	""	"186.6"	"0.4"	"183.6"	"208.1"	""	"937"	"30"	"36.000"	"29.000"	"0.0443312110099874"	"21"	"0.0001308"	"0.0002347"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFPNLAFIR"	"[K].dFPNLAFIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"661.37701"	"1321.74675"	"1321.74659"	"0.12"	"0.00008"	"8/74"	"8"	"74"	"3005682.62481689"	"HCD"	"MS2"	"8.015457"	"145.9"	"100.000"	"62.9620"	"20109"	"20109"	"20089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.7"	""	"112.2"	""	"117.8"	""	"351.1"	"5.7"	"333.1"	"355.2"	""	"937"	"34"	"36.000"	"29.000"	"0.0188672930581477"	"22"	"7.476E-05"	"0.000203"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFPNLAFIR"	"[K].dFPNLAFIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"661.37708"	"1321.74687"	"1321.74659"	"0.22"	"0.00014"	"5/74"	"5"	"74"	"6833388.42315674"	"HCD"	"MS2"	"21.05915"	"334.8"	"100.000"	"63.2654"	"20234"	"20234"	"20217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.5"	""	"286.1"	""	"312.0"	""	"762.6"	"0.5"	"771.5"	"802.0"	""	"937"	"27"	"36.000"	"29.000"	"0.0886562985335171"	"20"	"0.0001889"	"0.0004364"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLQQSK"	"[R].eMLQQSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"661.38025"	"1321.75322"	"1321.75499"	"-1.34"	"-0.00089"	"6/64"	"6"	"64"	"2804460.31774902"	"HCD"	"MS2"	"0"	"238.8"	"100.000"	"31.0618"	"7124"	"7124"	"7094"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"508.0"	""	"282.6"	""	"291.2"	""	"244.7"	""	"461.0"	"474.3"	""	"896"	"34"	"36.000"	"29.000"	"0.0175904931059021"	"27"	"0.0003839"	"0.001539"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLQQSK"	"[R].eMLQQSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"661.38135"	"1321.75542"	"1321.75499"	"0.32"	"0.00021"	"12/64"	"12"	"64"	"2236800.4631958"	"HCD"	"MS2"	"0"	"187.7"	"100.000"	"31.2108"	"7227"	"7227"	"7200"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"359.9"	""	"216.2"	""	"246.9"	""	"205.6"	"0.2"	"372.2"	"377.6"	""	"878"	"35"	"36.000"	"29.000"	"0.0141404919937343"	"27"	"0.0002277"	"0.001339"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPFEEK"	"[K].iTPFEEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"661.39166"	"1321.77605"	"1321.77677"	"-0.55"	"-0.00036"	"4/56"	"4"	"56"	"9146798.58843994"	"HCD"	"MS2"	"13.73152"	"685.4"	"100.000"	"41.1166"	"11232"	"11232"	"11205"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"891.1"	""	"764.0"	""	"859.6"	""	"1248.6"	""	"1341.4"	"1403.7"	""	"720"	"20"	"35.000"	"28.000"	"0.39838456223196"	"20"	"0.00103"	"0.0121"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPFEEK"	"[K].iTPFEEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"661.39221"	"1321.77715"	"1321.77677"	"0.28"	"0.00019"	"6/56"	"6"	"56"	"10935552.2655029"	"HCD"	"MS2"	"13.68131"	"832.8"	"100.000"	"41.2631"	"11336"	"11336"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1178.0"	""	"939.8"	""	"1073.3"	""	"1466.8"	"2.7"	"1567.8"	"1668.4"	""	"735"	"21"	"35.000"	"28.000"	"0.311356074696669"	"20"	"0.00103"	"0.01243"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFAAGADIK"	"[K].aFAAGADIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.5319"	"0.0000"	"1"	"1"	"1"	"661.39661"	"1321.78594"	"1321.78801"	"-1.57"	"-0.00104"	"7/64"	"7"	"64"	"5964301.50213623"	"HCD"	"MS2"	"0"	"491.4"	"100.000"	"38.6136"	"10252"	"10252"	"10225"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"675.0"	""	"706.1"	""	"730.4"	""	"783.4"	"5.1"	"827.0"	"925.4"	""	"669"	"47"	"35.000"	"28.000"	"0.00071350352344753"	""	"0.0001308"	"0.0002297"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITSQWK"	"[K].tITSQWk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"661.39746"	"1321.78765"	"1321.78801"	"-0.27"	"-0.00018"	"12/58"	"12"	"58"	"7798911.39379883"	"HCD"	"MS2"	"0"	"634.8"	"100.000"	"37.7894"	"9870"	"9870"	"9848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"713.2"	""	"742.5"	""	"824.6"	""	"1052.4"	""	"1307.6"	"1396.5"	""	"683"	"33"	"35.000"	"28.000"	"0.0168807099606004"	"25"	"0.000523"	"0.003147"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITSQWK"	"[K].tITSQWk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"661.39764"	"1321.78801"	"1321.78801"	"0.00"	"0.00000"	"12/58"	"12"	"58"	"7460366.206604"	"HCD"	"MS2"	"0"	"629.0"	"100.000"	"37.8252"	"9928"	"9928"	"9905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"744.3"	""	"761.3"	""	"783.2"	""	"1054.8"	""	"1286.4"	"1350.8"	""	"683"	"35"	"35.000"	"28.000"	"0.0117866586983195"	"26"	"0.0006037"	"0.005287"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLDFLK"	"[R].lDLDFLk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"661.40912"	"1321.81096"	"1321.81316"	"-1.66"	"-0.00110"	"12/52"	"12"	"52"	"2497607.24163818"	"HCD"	"MS2"	"9.975818"	"205.1"	"100.000"	"70.0026"	"23028"	"23028"	"23002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.6"	""	"203.8"	""	"236.5"	""	"370.4"	""	"412.9"	"457.9"	""	"469"	"34"	"33.000"	"26.000"	"0.00881338713056401"	""	"0.0002723"	"0.001383"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVILFEK"	"[R].dVILFEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"661.40967"	"1321.81206"	"1321.81316"	"-0.83"	"-0.00055"	"12/58"	"12"	"58"	"7548220.62341309"	"HCD"	"MS2"	"11.79843"	"650.6"	"100.000"	"52.9379"	"16039"	"16039"	"16018"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"918.7"	""	"942.7"	""	"899.7"	""	"983.7"	""	"1212.2"	"1213.2"	""	"464"	"33"	"33.000"	"26.000"	"0.0128673165406235"	"24"	"0.0006037"	"0.005637"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLDFLK"	"[R].lDLDFLk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"661.40979"	"1321.81230"	"1321.81316"	"-0.65"	"-0.00043"	"6/52"	"6"	"52"	"3154559.44775391"	"HCD"	"MS2"	"8.301916"	"249.1"	"100.000"	"70.1382"	"23031"	"23031"	"23011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"295.2"	""	"254.9"	""	"290.5"	""	"458.7"	""	"512.1"	"557.5"	""	"464"	"33"	"33.000"	"26.000"	"0.0118983841085997"	""	"0.0005564"	"0.003551"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDDLFLK"	"[K].lDDLFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"661.40985"	"1321.81243"	"1321.81316"	"-0.56"	"-0.00037"	"12/50"	"12"	"50"	"3170620.58404541"	"HCD"	"MS2"	"6.101348"	"255.5"	"100.000"	"66.8675"	"21757"	"21757"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.0"	""	"298.3"	""	"305.4"	""	"431.5"	""	"516.6"	"544.4"	""	"464"	"34"	"33.000"	"26.000"	"0.00844282883815121"	""	"0.000523"	"0.002842"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLDFLK"	"[R].lDLDFLk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"661.41016"	"1321.81304"	"1321.81316"	"-0.09"	"-0.00006"	"12/52"	"12"	"52"	"628450.968322754"	"HCD"	"MS2"	"8.377243"	"54.6"	"100.000"	"70.3166"	"23156"	"23156"	"23130"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.8"	""	"63.6"	""	"66.5"	""	"97.3"	""	"107.2"	"121.6"	""	"470"	"36"	"33.000"	"26.000"	"0.00530967406001929"	""	"0.0001889"	"0.0007133"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDDLFLK"	"[K].lDDLFLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"661.41077"	"1321.81426"	"1321.81316"	"0.83"	"0.00055"	"12/50"	"12"	"50"	"3009631.71618652"	"HCD"	"MS2"	"0"	"250.7"	"100.000"	"66.9212"	"21726"	"21726"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.2"	""	"278.2"	""	"314.7"	""	"462.6"	""	"488.0"	"519.8"	""	"476"	"34"	"33.000"	"26.000"	"0.0088222011784253"	""	"0.0003839"	"0.002085"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIVLAHAER"	"[R].aLIVLAHAER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"441.27640"	"1321.81464"	"1321.81534"	"-0.53"	"-0.00023"	"12/72"	"12"	"72"	"8893083.68249512"	"HCD"	"MS2"	"45.94226"	"117.9"	"58.966"	"37.5433"	"9812"	"9812"	"9793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.8"	"3.1"	"166.0"	""	"173.4"	""	"191.5"	"2.9"	"221.9"	"208.6"	""	"461"	"47"	"33.000"	"26.000"	"0.000479370086377402"	"23"	"7.476E-05"	"0.0002036"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIVLAHAER"	"[R].aLIVLAHAER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"441.27670"	"1321.81556"	"1321.81534"	"0.17"	"0.00007"	"12/72"	"12"	"72"	"9113619.51367188"	"HCD"	"MS2"	"47.83656"	"144.3"	"74.481"	"37.4345"	"9724"	"9724"	"9704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.1"	""	"175.7"	""	"214.6"	""	"240.4"	"7.3"	"275.6"	"254.5"	""	"461"	"43"	"33.000"	"26.000"	"0.00108061484584484"	"21"	"0.0001308"	"0.0002065"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTQVFK"	"[R].lQTQVFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"661.41498"	"1321.82268"	"1321.82439"	"-1.30"	"-0.00086"	"12/58"	"12"	"58"	"10086564.2568359"	"HCD"	"MS2"	"32.80371"	"778.2"	"100.000"	"40.2240"	"10866"	"10866"	"10837"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1051.6"	""	"1061.7"	""	"1136.9"	""	"1283.6"	"1.3"	"1474.7"	"1362.8"	""	"332"	"35"	"32.000"	"25.000"	"0.00548413438121113"	"24"	"0.0009404"	"0.00993"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTQVFK"	"[R].lQTQVFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"661.41583"	"1321.82439"	"1321.82439"	"0.00"	"0.00000"	"12/58"	"12"	"58"	"10210102.1762695"	"HCD"	"MS2"	"10.99429"	"763.9"	"100.000"	"40.3977"	"10981"	"10981"	"10957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"999.3"	""	"1018.8"	""	"1106.6"	""	"1243.9"	"1.1"	"1519.4"	"1352.5"	""	"333"	"35"	"32.000"	"25.000"	"0.00527732982596741"	"22"	"0.0006037"	"0.004929"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5581"	"0.0000"	"1"	"1"	"1"	"661.87286"	"1322.73845"	"1322.73901"	"-0.42"	"-0.00028"	"7/62"	"7"	"62"	"1296296.98968506"	"HCD"	"MS2"	"0"	"138.5"	"100.000"	"36.6018"	"9383"	"9383"	"9354"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"190.0"	""	"185.6"	""	"201.7"	""	"198.2"	""	"270.9"	"268.5"	""	"917"	"43"	"36.000"	"29.000"	"0.00219957786199922"	""	"0.0001859"	"0.0003533"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAGVGSMTK"	"[R].gGAGVGSMTk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"661.87811"	"1322.74895"	"1322.75024"	"-0.98"	"-0.00065"	"8/76"	"8"	"76"	"989595.006164551"	"HCD"	"MS2"	"0"	"91.6"	"100.000"	"29.9114"	"6696"	"6696"	"6665"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.0"	""	"156.1"	""	"175.9"	""	"102.5"	"1.7"	"149.8"	"109.1"	""	"892"	"60"	"36.000"	"29.000"	"4.50126787190201E-05"	"25"	"0"	"1.139E-05"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANSFLGQK"	"[K].aNSFLGQk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"661.89459"	"1322.78191"	"1322.78326"	"-1.02"	"-0.00067"	"7/68"	"7"	"68"	"10802772.631897"	"HCD"	"MS2"	"0"	"884.5"	"100.000"	"37.0651"	"9573"	"9573"	"9546"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1807.9"	""	"1398.1"	""	"949.9"	""	"1476.7"	"1.3"	"1396.8"	"1323.4"	""	"573"	"44"	"34.000"	"27.000"	"0.00125350083127839"	"23"	"0.0001889"	"0.0008675"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANSFLGQK"	"[K].aNSFLGQk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"661.89471"	"1322.78215"	"1322.78326"	"-0.84"	"-0.00055"	"7/68"	"7"	"68"	"11594569.9255371"	"HCD"	"MS2"	"0"	"927.7"	"100.000"	"37.1723"	"9660"	"9660"	"9638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1900.5"	""	"1465.1"	""	"990.9"	""	"1540.6"	""	"1496.5"	"1372.7"	""	"620"	"41"	"34.000"	"27.000"	"0.00240083157318781"	"23"	"0.0003146"	"0.001462"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIDLVYK"	"[K].nIDLVYk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QXU8"	"Cytoplasmic dynein 1 light intermediate chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1li1 PE=1 SV=1"	"Q9QXU8"	"Cytoplasmic dynein 1 light intermediate chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1li1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"661.90637"	"1322.80547"	"1322.80841"	"-2.22"	"-0.00147"	"6/60"	"6"	"60"	"3461776.59185791"	"HCD"	"MS2"	"6.518177"	"299.8"	"100.000"	"45.1080"	"12899"	"12899"	"12875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.7"	""	"354.8"	""	"382.1"	""	"506.2"	""	"587.9"	"674.6"	""	"435"	"13"	"33.000"	"26.000"	"1.01732393229966"	"16"	"0.0006037"	"0.005918"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVASEIFK"	"[K].aVASEIFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"661.90698"	"1322.80669"	"1322.80841"	"-1.30"	"-0.00086"	"14/58"	"14"	"58"	"7777891.55267334"	"HCD"	"MS2"	"0"	"585.7"	"100.000"	"43.3537"	"12186"	"12186"	"12174"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"711.1"	""	"826.8"	""	"818.2"	""	"777.3"	""	"1114.2"	"1313.9"	""	"426"	"48"	"33.000"	"26.000"	"0.000320907305097776"	""	"0.0002277"	"0.001151"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDFIASK"	"[K].aLDFIASk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"441.60709"	"1322.80671"	"1322.80841"	"-1.29"	"-0.00057"	"8/64"	"8"	"64"	"6803820.88104248"	"HCD"	"MS2"	"0"	"309.6"	"100.000"	"52.1282"	"15708"	"15708"	"15682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"428.3"	""	"398.6"	""	"352.1"	""	"451.3"	""	"644.3"	"666.6"	""	"426"	"32"	"33.000"	"26.000"	"0.0131334735396496"	"17"	"0.0009727"	"0.01067"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDFIASK"	"[K].aLDFIASk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"661.90753"	"1322.80779"	"1322.80841"	"-0.47"	"-0.00031"	"14/64"	"14"	"64"	"7752029.0322876"	"HCD"	"MS2"	"30.90751"	"585.0"	"100.000"	"51.9761"	"15646"	"15646"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"900.5"	""	"787.9"	""	"674.9"	""	"889.1"	"2.2"	"1136.1"	"1156.1"	""	"426"	"53"	"33.000"	"26.000"	"9.62453161518584E-05"	"20"	"0.0001889"	"0.0006466"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDFIASK"	"[K].aLDFIASk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"441.60757"	"1322.80817"	"1322.80841"	"-0.18"	"-0.00008"	"8/64"	"8"	"64"	"3645825.55340576"	"HCD"	"MS2"	"0"	"172.8"	"100.000"	"52.2224"	"15797"	"15797"	"15766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"265.6"	""	"242.2"	""	"195.1"	""	"257.1"	"0.1"	"329.5"	"348.5"	""	"422"	"34"	"33.000"	"26.000"	"0.00883654422398808"	"17"	"0.0004166"	"0.002356"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDFIASK"	"[K].aLDFIASk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"661.90796"	"1322.80864"	"1322.80841"	"0.18"	"0.00012"	"14/64"	"14"	"64"	"7314720.79882813"	"HCD"	"MS2"	"3.429063"	"544.0"	"100.000"	"52.5081"	"15913"	"15913"	"15894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"760.4"	""	"722.1"	""	"650.2"	""	"801.0"	"3.9"	"1084.1"	"1140.5"	""	"422"	"53"	"33.000"	"26.000"	"9.98349156408724E-05"	"20"	"0.0001889"	"0.001014"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDFIASK"	"[K].aLDFIASk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"661.90808"	"1322.80889"	"1322.80841"	"0.36"	"0.00024"	"14/64"	"14"	"64"	"10731397.8450928"	"HCD"	"MS2"	"16.72112"	"750.6"	"100.000"	"52.1947"	"15785"	"15785"	"15766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1136.5"	""	"982.5"	""	"854.4"	""	"1125.5"	""	"1467.3"	"1561.9"	""	"422"	"54"	"33.000"	"26.000"	"9.2529977230522E-05"	"20"	"0.0001889"	"0.0007493"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVASEIFK"	"[K].aVASEIFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"661.90814"	"1322.80901"	"1322.80841"	"0.45"	"0.00030"	"14/58"	"14"	"58"	"7713325.80010986"	"HCD"	"MS2"	"0"	"580.9"	"100.000"	"43.0791"	"12028"	"12028"	"12021"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"703.9"	""	"835.2"	""	"813.0"	""	"816.0"	"5.6"	"1079.2"	"1257.5"	""	"422"	"48"	"33.000"	"26.000"	"0.000322316438288234"	""	"0.0001889"	"0.001076"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDFIASK"	"[K].aLDFIASk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"661.90887"	"1322.81047"	"1322.80841"	"1.56"	"0.00103"	"14/64"	"14"	"64"	"12807156.3112183"	"HCD"	"MS2"	"1.97332"	"522.5"	"55.052"	"52.2663"	"15764"	"15764"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"736.8"	""	"672.3"	""	"627.7"	""	"720.2"	""	"1088.3"	"1119.3"	""	"410"	"51"	"33.000"	"26.000"	"0.0001551507434793"	"19"	"0.0004166"	"0.002183"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTYVTPR"	"[R].kTYVTPR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"661.91272"	"1322.81816"	"1322.81964"	"-1.12"	"-0.00074"	"5/66"	"5"	"66"	"1588017.42834473"	"HCD"	"MS2"	"0"	"81.0"	"100.000"	"25.6168"	"4950"	"4950"	"4923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.8"	""	"132.0"	""	"146.0"	""	"99.0"	""	"122.7"	"125.2"	""	"326"	"19"	"32.000"	"25.000"	"0.204732884082264"	"14"	"0.004262"	"0.1099"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTYVTPR"	"[R].kTYVTPR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"441.61099"	"1322.81842"	"1322.81964"	"-0.92"	"-0.00041"	"4/66"	"4"	"66"	"17106639.4265137"	"HCD"	"MS2"	"8.728746"	"335.9"	"26.157"	"25.7028"	"5020"	"5020"	"4999"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"547.9"	""	"583.8"	""	"583.6"	""	"419.6"	"3.5"	"517.9"	"515.6"	""	"361"	"6"	"32.000"	"25.000"	"4.60762585130356"	"13"	"0.002804"	"0.04518"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTYVTPR"	"[R].kTYVTPR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"441.61099"	"1322.81842"	"1322.81964"	"-0.92"	"-0.00041"	"6/66"	"6"	"66"	"17442503.7186279"	"HCD"	"MS2"	"12.52843"	"957.3"	"79.627"	"25.5983"	"4942"	"4942"	"4923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1662.6"	""	"1610.1"	""	"1674.4"	""	"1141.3"	"6.7"	"1465.7"	"1477.1"	""	"361"	"6"	"32.000"	"25.000"	"4.72582032983527"	"13"	"0.003788"	"0.08955"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTYVTPR"	"[R].kTYVTPR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"661.91376"	"1322.82024"	"1322.81964"	"0.45"	"0.00030"	"8/66"	"8"	"66"	"1814898.59564209"	"HCD"	"MS2"	"0"	"96.0"	"100.000"	"25.6429"	"4996"	"4996"	"4971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.6"	""	"174.3"	""	"166.2"	""	"113.5"	""	"137.0"	"140.2"	""	"351"	"19"	"32.000"	"25.000"	"0.2154155850683"	"14"	"0.004377"	"0.127"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMNIFLK"	"[K].vMNIFLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"661.91577"	"1322.82427"	"1322.82704"	"-2.09"	"-0.00138"	"12/58"	"12"	"58"	"12328368.6553345"	"HCD"	"MS2"	"25.76517"	"778.3"	"100.000"	"63.9507"	"20566"	"20566"	"20547"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1643.1"	""	"1245.7"	""	"941.3"	""	"937.4"	""	"1070.2"	"1519.4"	""	"344"	"36"	"32.000"	"25.000"	"0.00483646942828618"	""	"0.00119"	"0.01564"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMNIFLK"	"[K].vMNIFLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"661.91632"	"1322.82536"	"1322.82704"	"-1.26"	"-0.00084"	"12/58"	"12"	"58"	"11489390.416748"	"HCD"	"MS2"	"25.41461"	"782.2"	"100.000"	"63.8994"	"20492"	"20492"	"20473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1608.4"	""	"1277.8"	""	"928.5"	""	"951.0"	""	"1087.4"	"1544.0"	""	"338"	"35"	"32.000"	"25.000"	"0.00494181751855523"	""	"0.0006037"	"0.005035"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMNIFLK"	"[K].vMNIFLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"661.91730"	"1322.82732"	"1322.82704"	"0.21"	"0.00014"	"12/58"	"12"	"58"	"4544389.86297607"	"HCD"	"MS2"	"2.03347"	"328.9"	"100.000"	"64.2574"	"20692"	"20692"	"20675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"676.4"	""	"556.0"	""	"399.9"	""	"402.0"	""	"492.6"	"580.9"	""	"303"	"36"	"31.000"	"24.000"	"0.0040309984655952"	""	"0.0004166"	"0.002466"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMNIFLK"	"[K].vMNIFLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"661.91736"	"1322.82744"	"1322.82704"	"0.31"	"0.00020"	"12/58"	"12"	"58"	"4425892.47668457"	"HCD"	"MS2"	"1.389632"	"324.2"	"100.000"	"64.2106"	"20619"	"20619"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"654.7"	""	"554.0"	""	"410.8"	""	"385.8"	"1.7"	"501.4"	"554.6"	""	"303"	"36"	"31.000"	"24.000"	"0.0040964969216249"	""	"0.0006037"	"0.00429"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"661.92517"	"1322.84307"	"1322.84479"	"-1.31"	"-0.00086"	"7/60"	"7"	"60"	"28787159.9348145"	"HCD"	"MS2"	"6.477461"	"420.0"	"22.644"	"55.2807"	"17030"	"17030"	"17013"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"497.9"	""	"565.5"	""	"692.0"	""	"674.9"	""	"729.3"	"824.2"	""	"184"	"46"	"29.000"	"22.000"	"0.000221201377600638"	""	"0.0003839"	"0.002068"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"661.92548"	"1322.84368"	"1322.84479"	"-0.85"	"-0.00056"	"7/60"	"7"	"60"	"21082491.8895264"	"HCD"	"MS2"	"21.35772"	"727.2"	"54.980"	"54.9683"	"16902"	"16902"	"16885"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"900.3"	""	"1064.7"	""	"1162.5"	""	"1176.3"	"1.0"	"1265.5"	"1316.0"	""	"183"	"48"	"29.000"	"22.000"	"0.0001304430948146"	""	"0.000494"	"0.002636"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.5667"	"0.0000"	"1"	"1"	"1"	"441.61942"	"1322.84369"	"1322.84479"	"-0.83"	"-0.00037"	"8/60"	"8"	"60"	"4065157.06115723"	"HCD"	"MS2"	"10.12827"	"165.0"	"100.000"	"55.1797"	"16988"	"16988"	"16965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.4"	""	"214.0"	""	"272.4"	""	"272.1"	"3.8"	"294.2"	"312.4"	""	"183"	"30"	"29.000"	"22.000"	"0.00855896191845011"	""	"0.0006037"	"0.005489"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"661.92554"	"1322.84380"	"1322.84479"	"-0.75"	"-0.00050"	"5/60"	"5"	"60"	"6420211.94158936"	"HCD"	"MS2"	"59.3062"	"746.5"	"100.000"	"54.8197"	"16787"	"16787"	"16764"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"901.7"	""	"1107.7"	""	"1200.0"	""	"1215.7"	"1.0"	"1319.2"	"1328.1"	""	"183"	"2"	"29.000"	"22.000"	"5.60300608428168"	"13"	"0.00806"	"0.3361"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"661.92554"	"1322.84380"	"1322.84479"	"-0.75"	"-0.00050"	"7/60"	"7"	"60"	"21470578.8983154"	"HCD"	"MS2"	"18.52654"	"746.5"	"81.408"	"54.8037"	"16781"	"16781"	"16764"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"901.7"	""	"1107.7"	""	"1200.0"	""	"1215.7"	"1.0"	"1319.2"	"1328.1"	""	"183"	"46"	"29.000"	"22.000"	"0.00022825541751528"	""	"0.0004557"	"0.002549"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLYGTK"	"[K].gILLYGTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"661.92572"	"1322.84416"	"1322.84479"	"-0.48"	"-0.00032"	"7/56"	"7"	"56"	"7181664.01940918"	"HCD"	"MS2"	"40.12797"	"533.0"	"100.000"	"47.2230"	"13711"	"13711"	"13688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"880.3"	""	"768.4"	""	"828.5"	""	"770.5"	"4.0"	"871.2"	"917.1"	""	"183"	"37"	"29.000"	"22.000"	"0.00180476680354509"	""	"0.0002277"	"0.001116"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"661.92584"	"1322.84441"	"1322.84479"	"-0.29"	"-0.00019"	"7/60"	"7"	"60"	"20435126.4530029"	"HCD"	"MS2"	"7.472786"	"731.3"	"56.839"	"55.1185"	"16909"	"16909"	"16891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"850.8"	""	"980.9"	""	"1190.8"	""	"1140.2"	"0.0"	"1341.2"	"1427.5"	""	"183"	"46"	"29.000"	"22.000"	"0.000219999196200635"	""	"0.0004166"	"0.002457"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"661.92590"	"1322.84453"	"1322.84479"	"-0.20"	"-0.00013"	"7/60"	"7"	"60"	"5953860.61828613"	"HCD"	"MS2"	"14.31437"	"402.8"	"100.000"	"55.4425"	"17042"	"17042"	"17019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"467.0"	""	"564.0"	""	"648.3"	""	"632.0"	""	"739.6"	"771.3"	""	"181"	"48"	"29.000"	"22.000"	"0.000134167886705709"	""	"0.0001889"	"0.001069"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"441.61975"	"1322.84470"	"1322.84479"	"-0.07"	"-0.00003"	"7/60"	"7"	"60"	"4285048.37127686"	"HCD"	"MS2"	"11.96538"	"165.2"	"100.000"	"54.9347"	"16834"	"16834"	"16812"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.5"	""	"234.4"	""	"261.4"	""	"267.1"	"1.8"	"300.9"	"307.9"	""	"181"	"24"	"29.000"	"22.000"	"0.0375533408584099"	""	"0.0006396"	"0.00626"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLYGTK"	"[K].gILLYGTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.5800"	"0.0000"	"1"	"1"	"1"	"661.92603"	"1322.84477"	"1322.84479"	"-0.02"	"-0.00001"	"7/56"	"7"	"56"	"7430019.22180176"	"HCD"	"MS2"	"34.56059"	"519.6"	"100.000"	"47.5189"	"13880"	"13880"	"13858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"848.0"	""	"696.5"	""	"782.7"	""	"775.1"	""	"892.7"	"925.6"	""	"181"	"50"	"29.000"	"22.000"	"8.70259111937217E-05"	""	"0.0001889"	"0.0006781"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"441.61978"	"1322.84479"	"1322.84479"	"0.00"	"0.00000"	"7/60"	"7"	"60"	"1223700.80010986"	"HCD"	"MS2"	"49.80125"	"67.9"	"100.000"	"55.5105"	"17124"	"17124"	"17093"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.4"	""	"78.5"	""	"114.3"	""	"106.5"	""	"133.2"	"142.5"	""	"181"	"27"	"29.000"	"22.000"	"0.0180987499201763"	""	"0.0005564"	"0.003578"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"661.92639"	"1322.84551"	"1322.84479"	"0.54"	"0.00036"	"12/60"	"12"	"60"	"4574082.01916504"	"HCD"	"MS2"	"34.49075"	"337.7"	"100.000"	"55.8376"	"17257"	"17257"	"17237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"443.2"	""	"477.2"	""	"527.9"	""	"513.7"	""	"603.5"	"640.1"	""	"181"	"38"	"29.000"	"22.000"	"0.0016056414802056"	""	"0.0002277"	"0.00115"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLFSVTK"	"[K].gLLFSVTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"661.92670"	"1322.84612"	"1322.84479"	"1.00"	"0.00066"	"7/60"	"7"	"60"	"6755108.54266357"	"HCD"	"MS2"	"19.12302"	"429.0"	"100.000"	"55.5978"	"17159"	"17159"	"17141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"525.0"	""	"598.6"	""	"679.0"	""	"674.9"	""	"781.9"	"806.3"	""	"138"	"48"	"28.000"	"21.000"	"0.000100195701613554"	""	"0.0001889"	"0.0007427"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFGPYVWGR"	"[K].lFGPYVWGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"662.37433"	"1323.74138"	"1323.74111"	"0.21"	"0.00014"	"7/66"	"7"	"66"	"3582752.41351318"	"HCD"	"MS2"	"25.80891"	"158.8"	"100.000"	"65.6001"	"21187"	"21187"	"21161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.3"	""	"245.4"	""	"265.3"	""	"252.7"	"1.8"	"252.4"	"259.1"	""	"747"	"22"	"35.000"	"28.000"	"0.234579797016775"	"24"	"0.0001889"	"0.0004428"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSAMSAAK"	"[K].lSSAMSAAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"662.38794"	"1323.76860"	"1323.77064"	"-1.54"	"-0.00102"	"8/72"	"8"	"72"	"9160385.53448486"	"HCD"	"MS2"	"23.82612"	"669.3"	"100.000"	"35.8500"	"9074"	"9074"	"9051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1069.6"	""	"871.5"	""	"994.4"	""	"804.7"	""	"1263.9"	"1345.0"	""	"631"	"45"	"34.000"	"28.000"	"0.000988551646021568"	"28"	"0.0001308"	"0.0003022"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSAMSAAK"	"[K].lSSAMSAAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"662.38800"	"1323.76872"	"1323.77064"	"-1.45"	"-0.00096"	"8/72"	"8"	"72"	"8144468.36126709"	"HCD"	"MS2"	"35.00224"	"570.8"	"100.000"	"35.8980"	"9137"	"9137"	"9113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"883.4"	""	"761.0"	""	"856.2"	""	"674.9"	""	"1074.1"	"1165.6"	""	"631"	"45"	"34.000"	"28.000"	"0.000988551646021568"	"28"	"0.0001308"	"0.0002354"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFFHVK"	"[R].tSFFHVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"441.93201"	"1323.78147"	"1323.78253"	"-0.80"	"-0.00035"	"5/50"	"5"	"50"	"26638557.9462891"	"HCD"	"MS2"	"24.14165"	"225.2"	"22.740"	"37.4654"	"9780"	"9780"	"9761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"296.3"	""	"265.6"	""	"284.1"	""	"402.7"	""	"437.4"	"455.1"	""	"582"	"19"	"34.000"	"27.000"	"0.369737064615685"	"14"	"0.002651"	"0.03944"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFFHVK"	"[R].tSFFHVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"441.93204"	"1323.78156"	"1323.78253"	"-0.73"	"-0.00032"	"5/50"	"5"	"50"	"29311332.5510254"	"HCD"	"MS2"	"21.57447"	"265.3"	"23.976"	"37.3516"	"9690"	"9690"	"9672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"336.3"	""	"311.5"	""	"328.4"	""	"472.4"	"1.6"	"540.4"	"527.1"	""	"582"	"22"	"34.000"	"27.000"	"0.191819603516098"	"14"	"0.0008125"	"0.007809"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVYNLTK"	"[R].aGVYNLTk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"662.40570"	"1323.80412"	"1323.80366"	"0.35"	"0.00023"	"14/62"	"14"	"62"	"6829092.88696289"	"HCD"	"MS2"	"0"	"534.4"	"100.000"	"37.5525"	"9816"	"9816"	"9793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"965.1"	""	"860.9"	""	"815.3"	""	"697.9"	"1.8"	"920.2"	"788.3"	""	"411"	"53"	"33.000"	"26.000"	"9.97267867833159E-05"	"25"	"0.0001889"	"0.0009797"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVYNLTK"	"[R].aGVYNLTk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"662.40643"	"1323.80559"	"1323.80366"	"1.46"	"0.00097"	"7/62"	"7"	"62"	"6926535.25531006"	"HCD"	"MS2"	"0"	"551.2"	"100.000"	"37.4523"	"9732"	"9732"	"9704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"997.0"	""	"894.4"	""	"823.4"	""	"705.8"	"1.0"	"953.1"	"834.4"	""	"397"	"49"	"32.000"	"25.000"	"0.000223234087332435"	"21"	"0.0001889"	"0.00108"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAYQTGK"	"[K].aQAYQTGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"662.88422"	"1324.76116"	"1324.76252"	"-1.03"	"-0.00068"	"7/68"	"7"	"68"	"500268.672668457"	"HCD"	"MS2"	"0"	"42.9"	"100.000"	"26.5731"	"5337"	"5337"	"5313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.6"	""	"57.4"	""	"68.0"	""	"63.9"	""	"71.6"	"71.5"	""	"628"	"32"	"34.000"	"27.000"	"0.0199035089334675"	"17"	"0"	"0.0001441"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAYQTGK"	"[K].aQAYQTGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.88489"	"1324.76250"	"1324.76252"	"-0.02"	"-0.00001"	"7/68"	"7"	"68"	"335991.364440918"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"26.6820"	"5418"	"5418"	"5397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.8"	""	"39.1"	""	"54.0"	""	"43.4"	"1.6"	"51.8"	"54.6"	""	"659"	"32"	"35.000"	"28.000"	"0.0191803010255502"	"15"	"0"	"0.0001187"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDGSITK"	"[R].vFDGSITk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"662.89685"	"1324.78642"	"1324.78767"	"-0.94"	"-0.00062"	"7/64"	"7"	"64"	"16349818.2862549"	"HCD"	"MS2"	"31.84538"	"951.9"	"76.617"	"41.6848"	"11508"	"11508"	"11490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"894.3"	""	"1164.2"	""	"1051.5"	""	"1630.1"	""	"2067.3"	"2253.1"	""	"490"	"50"	"33.000"	"26.000"	"0.000241638473979647"	""	"0.0002277"	"0.001186"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDGSITK"	"[R].vFDGSITk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"662.89716"	"1324.78703"	"1324.78767"	"-0.48"	"-0.00032"	"7/64"	"7"	"64"	"17267196.468689"	"HCD"	"MS2"	"26.34163"	"890.6"	"67.779"	"41.4969"	"11388"	"11388"	"11371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"848.8"	""	"1108.8"	""	"960.6"	""	"1537.7"	""	"1950.8"	"2071.7"	""	"489"	"48"	"33.000"	"26.000"	"0.00036751821070901"	""	"0.0002277"	"0.001178"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSDFGLTK"	"[K].vSDFGLTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"662.89771"	"1324.78813"	"1324.78767"	"0.35"	"0.00023"	"12/66"	"12"	"66"	"3196573.17510986"	"HCD"	"MS2"	"0"	"283.9"	"100.000"	"44.5935"	"12640"	"12640"	"12616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"428.8"	""	"402.1"	""	"372.1"	""	"474.4"	""	"508.5"	"502.1"	""	"471"	"41"	"33.000"	"26.000"	"0.00176193917370377"	""	"0.0001889"	"0.0004705"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSDFGLTK"	"[K].vSDFGLTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"662.89777"	"1324.78826"	"1324.78767"	"0.44"	"0.00029"	"12/66"	"12"	"66"	"3722727.53924561"	"HCD"	"MS2"	"14.38889"	"318.6"	"100.000"	"44.8737"	"12803"	"12803"	"12784"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"484.4"	""	"417.8"	""	"434.1"	""	"529.2"	""	"568.6"	"583.5"	""	"471"	"41"	"33.000"	"26.000"	"0.00174578561826366"	""	"0.0001889"	"0.0006402"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVFWK"	"[K].vSTVFWk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"662.90460"	"1324.80193"	"1324.80293"	"-0.76"	"-0.00050"	"6/50"	"6"	"50"	"7676744.99224854"	"HCD"	"MS2"	"6.351427"	"635.0"	"100.000"	"53.0977"	"16154"	"16154"	"16134"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"847.1"	""	"929.7"	""	"931.5"	""	"933.2"	"1.5"	"1187.4"	"1187.0"	""	"372"	"31"	"32.000"	"25.000"	"0.0165391407921578"	"25"	"0.0006037"	"0.005524"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVFWK"	"[K].vSTVFWk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"662.90503"	"1324.80278"	"1324.80293"	"-0.11"	"-0.00007"	"12/50"	"12"	"50"	"8125268.39733887"	"HCD"	"MS2"	"10.6347"	"682.7"	"100.000"	"52.9012"	"16024"	"16024"	"16002"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"928.3"	""	"929.6"	""	"979.8"	""	"1049.6"	"4.3"	"1258.3"	"1319.6"	""	"366"	"34"	"32.000"	"25.000"	"0.00735277183853559"	"24"	"0.0006396"	"0.006271"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIATSTK"	"[K].fVIATSTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"442.27878"	"1324.82178"	"1324.82406"	"-1.72"	"-0.00076"	"8/60"	"8"	"60"	"2695765.19830322"	"HCD"	"MS2"	"47.83986"	"125.3"	"100.000"	"41.5932"	"11471"	"11471"	"11447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.1"	""	"156.9"	""	"178.2"	""	"207.1"	""	"243.5"	"254.8"	""	"228"	"29"	"30.000"	"23.000"	"0.0147538325925298"	"17"	"0.0004166"	"0.002209"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIATSTK"	"[K].fVIATSTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"662.91486"	"1324.82244"	"1324.82406"	"-1.23"	"-0.00081"	"7/60"	"7"	"60"	"12340851.4378662"	"HCD"	"MS2"	"5.621513"	"694.3"	"71.473"	"41.3890"	"11343"	"11343"	"11328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"855.3"	""	"1016.7"	""	"996.3"	""	"1088.6"	""	"1290.8"	"1338.9"	""	"230"	"48"	"30.000"	"23.000"	"0.000173259812611475"	"18"	"0.0002277"	"0.001315"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIATSTK"	"[K].fVIATSTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"662.91504"	"1324.82280"	"1324.82406"	"-0.95"	"-0.00063"	"7/60"	"7"	"60"	"11862480.84375"	"HCD"	"MS2"	"0"	"862.1"	"100.000"	"41.4786"	"11424"	"11424"	"11405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1162.0"	""	"1314.9"	""	"1340.6"	""	"1337.8"	""	"1503.9"	"1504.5"	""	"230"	"40"	"30.000"	"23.000"	"0.00108317303600127"	"22"	"0.0003146"	"0.001419"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIATSTK"	"[K].fVIATSTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"442.27921"	"1324.82306"	"1324.82406"	"-0.75"	"-0.00033"	"8/60"	"8"	"60"	"3013091.06384277"	"HCD"	"MS2"	"32.48404"	"133.5"	"100.000"	"41.3799"	"11340"	"11340"	"11312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.9"	""	"180.9"	""	"200.4"	""	"202.5"	""	"268.7"	"250.5"	""	"230"	"31"	"30.000"	"23.000"	"0.00852506777496055"	"16"	"0.0003839"	"0.001669"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVAYNSK"	"[R].vSVAYNSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"663.38434"	"1325.76140"	"1325.78292"	"-16.23"	"-0.01076"	"7/70"	"7"	"70"	"1829867.68536377"	"HCD"	"MS2"	"0"	"185.4"	"100.000"	"33.0562"	"7941"	"7941"	"7912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"289.4"	""	"257.6"	""	"284.1"	""	"235.0"	""	"329.3"	"361.1"	""	"564"	"17"	"34.000"	"27.000"	"0.558790621277038"	"14"	"0.0009727"	"0.01053"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVAYNSK"	"[R].vSVAYNSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"663.38446"	"1325.76164"	"1325.78292"	"-16.05"	"-0.01064"	"7/70"	"7"	"70"	"1615830.11224365"	"HCD"	"MS2"	"0"	"162.8"	"100.000"	"33.1356"	"8016"	"8016"	"7990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"254.1"	""	"232.7"	""	"237.3"	""	"207.7"	""	"309.6"	"300.7"	""	"560"	"15"	"34.000"	"27.000"	"0.830152789066815"	"16"	"0.0006037"	"0.004835"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSMFEK"	"[K].lLSMFEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"663.39813"	"1325.78899"	"1325.79032"	"-1.00"	"-0.00066"	"12/54"	"12"	"54"	"3411269.55456543"	"HCD"	"MS2"	"17.77017"	"287.0"	"100.000"	"65.8581"	"21292"	"21292"	"21273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"396.3"	""	"398.5"	""	"463.1"	""	"304.5"	""	"590.7"	"571.4"	""	"470"	"37"	"33.000"	"26.000"	"0.00473225198717661"	""	"0.000523"	"0.00296"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSMFEK"	"[K].lLSMFEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"663.39813"	"1325.78899"	"1325.79032"	"-1.00"	"-0.00066"	"6/54"	"6"	"54"	"3927701.56518555"	"HCD"	"MS2"	"35.26527"	"290.8"	"100.000"	"65.8130"	"21327"	"21327"	"21299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"406.6"	""	"405.6"	""	"455.2"	""	"294.9"	"5.8"	"615.9"	"574.9"	""	"470"	"34"	"33.000"	"26.000"	"0.0100246186918374"	""	"0.0006037"	"0.003929"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIPIIGK"	"[R].qVIPIIGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"663.44843"	"1325.88957"	"1325.89208"	"-1.89"	"-0.00125"	"5/72"	"5"	"72"	"1840478.83129883"	"HCD"	"MS2"	"0"	"126.3"	"100.000"	"50.1614"	"14956"	"14956"	"14932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.5"	""	"167.2"	""	"185.5"	""	"203.4"	"2.0"	"228.3"	"239.2"	""	"54"	"8"	"24.000"	"17.000"	"0.454321996489026"	""	"0.00286"	"0.04952"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDAMPFTLR"	"[R].fDAMPFTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.85718"	"1326.70708"	"1326.70776"	"-0.51"	"-0.00034"	"6/74"	"6"	"74"	"1580857.12866211"	"HCD"	"MS2"	"6.075784"	"105.5"	"100.000"	"63.7688"	"20492"	"20492"	"20467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.3"	""	"178.1"	""	"172.5"	""	"125.9"	"0.5"	"179.5"	"175.8"	""	"571"	"28"	"34.000"	"27.000"	"0.0412673054547963"	"14"	"0.0001308"	"0.0002889"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDAMPFTLR"	"[R].fDAMPFTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"663.85742"	"1326.70757"	"1326.70776"	"-0.14"	"-0.00010"	"6/74"	"6"	"74"	"2126156.28796387"	"HCD"	"MS2"	"9.533964"	"128.3"	"100.000"	"63.6279"	"20381"	"20381"	"20361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.0"	""	"206.9"	""	"215.1"	""	"125.1"	"0.2"	"215.1"	"215.7"	""	"579"	"25"	"34.000"	"27.000"	"0.101776747532942"	"15"	"0.0001308"	"0.0002902"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEPFSNK"	"[R].fEPFSNk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"663.87531"	"1326.74333"	"1326.74581"	"-1.87"	"-0.00124"	"6/56"	"6"	"56"	"38467845.1363525"	"HCD"	"MS2"	"22.87785"	"1851.6"	"60.589"	"42.8360"	"11977"	"11977"	"11955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2923.5"	""	"2529.4"	""	"2728.1"	""	"3011.9"	""	"3083.2"	"3248.5"	""	"633"	"22"	"35.000"	"28.000"	"0.186798641874389"	"22"	"0.002772"	"0.04465"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEPFSNK"	"[R].fEPFSNk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"663.87543"	"1326.74358"	"1326.74581"	"-1.68"	"-0.00112"	"6/56"	"6"	"56"	"41569250.1918945"	"HCD"	"MS2"	"31.42267"	"1379.9"	"42.198"	"42.5708"	"11824"	"11824"	"11804"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2170.4"	""	"1847.2"	""	"2049.1"	""	"2270.7"	"5.4"	"2294.7"	"2415.8"	""	"633"	"24"	"35.000"	"28.000"	"0.140079219852771"	"23"	"0.002361"	"0.03472"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEPFSNK"	"[R].fEPFSNk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"442.91959"	"1326.74421"	"1326.74581"	"-1.21"	"-0.00053"	"7/56"	"7"	"56"	"5254355.38861084"	"HCD"	"MS2"	"0"	"296.1"	"100.000"	"42.7057"	"11880"	"11880"	"11852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"409.1"	""	"427.9"	""	"484.5"	""	"470.2"	""	"529.7"	"484.0"	""	"629"	"12"	"34.000"	"27.000"	"2.15586047219362"	"21"	"0.001058"	"0.01314"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEPFSNK"	"[R].fEPFSNk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.4500"	"0.0000"	"1"	"1"	"1"	"442.91992"	"1326.74521"	"1326.74581"	"-0.45"	"-0.00020"	"5/56"	"5"	"56"	"11985815.2548218"	"HCD"	"MS2"	"0"	"516.7"	"100.000"	"42.8933"	"12001"	"12001"	"11971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"797.6"	""	"681.8"	""	"780.4"	""	"818.9"	""	"889.2"	"923.7"	""	"628"	"20"	"34.000"	"27.000"	"0.283745934748802"	"25"	"0.0006037"	"0.005179"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEPFSNK"	"[R].fEPFSNk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"663.87628"	"1326.74529"	"1326.74581"	"-0.39"	"-0.00026"	"5/56"	"5"	"56"	"12733850.3284912"	"HCD"	"MS2"	"34.82331"	"780.0"	"100.000"	"43.1269"	"12096"	"12096"	"12079"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1112.4"	""	"1022.5"	""	"1107.4"	""	"1318.0"	""	"1424.9"	"1410.6"	""	"628"	"1"	"34.000"	"27.000"	"27.8566987779919"	"13"	"0.003507"	"0.08167"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTEFMK"	"[R].vNTEFMk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"663.87756"	"1326.74785"	"1326.74918"	"-1.00"	"-0.00066"	"10/60"	"10"	"60"	"4064006.04840088"	"HCD"	"MS2"	"0"	"388.9"	"100.000"	"39.3617"	"10516"	"10516"	"10486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.7"	""	"552.3"	""	"564.4"	""	"519.0"	"2.1"	"743.0"	"727.8"	""	"661"	"25"	"35.000"	"28.000"	"0.108435494373886"	"20"	"0.0006037"	"0.003967"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASDFISK"	"[K].tASDFISk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"663.88721"	"1326.76714"	"1326.76694"	"0.15"	"0.00010"	"7/68"	"7"	"68"	"12085451.5739136"	"HCD"	"MS2"	"4.690154"	"658.4"	"67.896"	"38.4144"	"10170"	"10170"	"10145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"903.8"	""	"851.5"	""	"859.7"	""	"1106.0"	""	"1179.5"	"1342.8"	""	"583"	"37"	"34.000"	"27.000"	"0.0056837970082947"	"20"	"0.0003839"	"0.001548"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASDFISK"	"[K].tASDFISk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"663.88721"	"1326.76714"	"1326.76694"	"0.15"	"0.00010"	"7/68"	"7"	"68"	"9841063.98620605"	"HCD"	"MS2"	"0"	"777.6"	"100.000"	"38.3328"	"10093"	"10093"	"10071"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1031.7"	""	"991.3"	""	"978.8"	""	"1341.0"	""	"1378.3"	"1661.4"	""	"583"	"47"	"34.000"	"27.000"	"0.000643633379675009"	"21"	"0.0001889"	"0.0009409"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLGPNWK"	"[R].gPLGPNWk.[KQ]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P53812; P16446"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2;Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P53812; P16446"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2; Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"663.89661"	"1326.78594"	"1326.79343"	"-5.65"	"-0.00375"	"7/62"	"7"	"62"	"18120366.6798096"	"HCD"	"MS2"	"16.37834"	"1385.3"	"100.000"	"41.2700"	"11339"	"11339"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1913.0"	""	"1795.1"	""	"1949.7"	""	"2289.4"	"7.8"	"2568.9"	"2603.7"	""	"510"	"42"	"34.000"	"27.000"	"0.00156870102541016"	"22"	"0.002981"	"0.05731"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLGPNWK"	"[R].gPLGPNWk.[KQ]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P53812; P16446"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2;Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P53812; P16446"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2; Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"663.89966"	"1326.79204"	"1326.79343"	"-1.05"	"-0.00069"	"12/62"	"12"	"62"	"18510691.973877"	"HCD"	"MS2"	"6.988141"	"1323.7"	"90.949"	"41.0957"	"11223"	"11223"	"11205"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1812.5"	""	"1682.4"	""	"1871.6"	""	"2185.7"	"0.2"	"2528.6"	"2466.1"	""	"467"	"37"	"33.000"	"26.000"	"0.00499214147898771"	"20"	"0.002683"	"0.04021"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTGSSYK"	"[K].lLTGSSYk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7A7"	"CB1 cannabinoid receptor-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Cnrip1 PE=1 SV=1"	"Q5M7A7"	"CB1 cannabinoid receptor-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Cnrip1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"663.90479"	"1326.80229"	"1326.80332"	"-0.78"	"-0.00051"	"7/62"	"7"	"62"	"2404579.55938721"	"HCD"	"MS2"	"18.3482"	"237.9"	"100.000"	"39.0422"	"10428"	"10428"	"10398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.5"	""	"317.9"	""	"343.3"	""	"395.6"	"1.8"	"419.0"	"461.7"	""	"419"	"26"	"33.000"	"26.000"	"0.048104314177954"	"18"	"0.0001889"	"0.001047"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTGSSYK"	"[K].lLTGSSYk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7A7"	"CB1 cannabinoid receptor-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Cnrip1 PE=1 SV=1"	"Q5M7A7"	"CB1 cannabinoid receptor-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Cnrip1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"663.90540"	"1326.80351"	"1326.80332"	"0.14"	"0.00010"	"7/62"	"7"	"62"	"1862335.66949463"	"HCD"	"MS2"	"43.45475"	"193.7"	"100.000"	"38.9605"	"10351"	"10351"	"10326"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"268.2"	""	"232.3"	""	"269.3"	""	"336.9"	""	"339.8"	"390.1"	""	"419"	"27"	"33.000"	"26.000"	"0.0469012078530067"	"22"	"0.0001889"	"0.0007109"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTFGLFGK"	"[R].vTFGLFGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"663.91235"	"1326.81743"	"1326.81858"	"-0.87"	"-0.00057"	"7/56"	"7"	"56"	"6602561.14263916"	"HCD"	"MS2"	"0"	"472.4"	"100.000"	"63.1604"	"20244"	"20244"	"20227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"584.4"	""	"514.6"	""	"632.8"	""	"959.9"	""	"871.4"	"917.4"	""	"297"	"47"	"31.000"	"24.000"	"0.000332450089077398"	"21"	"0.0001889"	"0.000838"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTFGLFGK"	"[R].vTFGLFGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"663.91260"	"1326.81792"	"1326.81858"	"-0.50"	"-0.00033"	"12/56"	"12"	"56"	"5313789.465271"	"HCD"	"MS2"	"13.45338"	"396.8"	"100.000"	"63.0375"	"20140"	"20140"	"20121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"497.9"	""	"426.7"	""	"503.0"	""	"787.0"	""	"756.2"	"798.2"	""	"298"	"39"	"31.000"	"24.000"	"0.0020758036363885"	"19"	"0.0001889"	"0.0007816"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIYNNMK"	"[R].aIYNNmk.[Q]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.37500"	"1327.74272"	"1327.74443"	"-1.28"	"-0.00085"	"9/56"	"9"	"56"	"463522.1015625"	"HCD"	"MS2"	"100"	"38.5"	"100.000"	"29.2144"	"6411"	"6411"	"6396"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.6"	""	"36.7"	""	"50.2"	""	"59.7"	""	"72.0"	"103.7"	""	"651"	"20"	"35.000"	"28.000"	"0.324751370774241"	"14"	"0.004789"	"0.1394"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIYNNMK"	"[R].aIYNNmk.[Q]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.37555"	"1327.74382"	"1327.74443"	"-0.46"	"-0.00030"	"9/56"	"9"	"56"	"534063.153015137"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"29.1541"	"6345"	"6345"	"6329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.1"	""	"40.4"	""	"51.5"	""	"76.4"	""	"65.9"	"118.9"	""	"648"	"21"	"35.000"	"28.000"	"0.268253261042796"	"14"	"0.003286"	"0.06956"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFEEFK"	"[K].lGFEEFk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"664.38611"	"1327.76494"	"1327.76621"	"-0.96"	"-0.00063"	"5/50"	"5"	"50"	"15538339.9234619"	"HCD"	"MS2"	"5.419111"	"1396.7"	"100.000"	"52.3840"	"15863"	"15863"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1984.0"	""	"1936.5"	""	"2019.4"	""	"2306.9"	""	"2381.7"	"2597.7"	""	"580"	"18"	"34.000"	"27.000"	"0.434908602295688"	"23"	"0.00103"	"0.01265"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFEEFK"	"[K].lGFEEFk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"664.38672"	"1327.76616"	"1327.76621"	"-0.04"	"-0.00002"	"6/50"	"6"	"50"	"2831303.94482422"	"HCD"	"MS2"	"13.99032"	"265.9"	"100.000"	"52.7499"	"16012"	"16012"	"15990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"326.1"	""	"328.4"	""	"355.2"	""	"463.4"	""	"539.6"	"511.9"	""	"579"	"28"	"34.000"	"27.000"	"0.0492774888180338"	"23"	"0.000523"	"0.003085"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFEEFK"	"[K].lGFEEFk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"664.38672"	"1327.76616"	"1327.76621"	"-0.04"	"-0.00002"	"5/50"	"5"	"50"	"15549134.3800049"	"HCD"	"MS2"	"2.230062"	"1394.8"	"100.000"	"52.1880"	"15732"	"15732"	"15714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1954.0"	""	"1960.9"	""	"2028.4"	""	"2296.8"	"0.2"	"2411.3"	"2554.1"	""	"579"	"17"	"34.000"	"27.000"	"0.613265548654441"	"18"	"0.001217"	"0.01843"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFEEFK"	"[K].lGFEEFk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"664.38751"	"1327.76775"	"1327.76621"	"1.16"	"0.00077"	"9/50"	"9"	"50"	"3233604.90179443"	"HCD"	"MS2"	"9.998945"	"309.0"	"100.000"	"52.5059"	"15862"	"15862"	"15842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.5"	""	"393.2"	""	"436.2"	""	"549.8"	"2.6"	"593.8"	"577.0"	""	"585"	"19"	"34.000"	"27.000"	"0.358200238285026"	"23"	"0.00103"	"0.0117"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIMSIYK"	"[R].dIMSIYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3B7D1"	"Ubiquitin-conjugating enzyme E2 Z OS=Rattus norvegicus OX=10116 GN=Ube2z PE=1 SV=2"	"Q3B7D1"	"Ubiquitin-conjugating enzyme E2 Z OS=Rattus norvegicus OX=10116 GN=Ube2z PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"664.38770"	"1327.76811"	"1327.76958"	"-1.10"	"-0.00073"	"6/54"	"6"	"54"	"3095335.09332275"	"HCD"	"MS2"	"32.92405"	"240.4"	"100.000"	"48.4980"	"14233"	"14233"	"14208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.7"	""	"332.3"	""	"337.8"	""	"290.2"	"7.5"	"478.8"	"469.5"	""	"603"	"32"	"34.000"	"27.000"	"0.0182090511756979"	"23"	"0.0003146"	"0.001435"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIMSIYK"	"[R].dIMSIYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3B7D1"	"Ubiquitin-conjugating enzyme E2 Z OS=Rattus norvegicus OX=10116 GN=Ube2z PE=1 SV=2"	"Q3B7D1"	"Ubiquitin-conjugating enzyme E2 Z OS=Rattus norvegicus OX=10116 GN=Ube2z PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"664.38782"	"1327.76836"	"1327.76958"	"-0.92"	"-0.00061"	"6/54"	"6"	"54"	"3210125.84619141"	"HCD"	"MS2"	"32.92659"	"239.2"	"100.000"	"48.8165"	"14411"	"14411"	"14383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"375.2"	""	"307.0"	""	"335.3"	""	"298.8"	"2.6"	"469.4"	"479.4"	""	"603"	"32"	"34.000"	"27.000"	"0.0212954742610283"	"24"	"0.0003839"	"0.001557"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLTVMMK"	"[R].fLTVMMk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"664.39752"	"1327.78777"	"1327.78821"	"-0.33"	"-0.00022"	"6/48"	"6"	"48"	"1445628.24615479"	"HCD"	"MS2"	"5.316005"	"124.3"	"100.000"	"62.3001"	"19839"	"19839"	"19817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.7"	""	"216.7"	""	"249.0"	""	"153.1"	"1.4"	"173.6"	"189.5"	""	"450"	"31"	"33.000"	"26.000"	"0.0195516096589418"	"19"	"0.0001889"	"0.00105"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSLIPWIR"	"[R].vDSLIPWIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"664.39917"	"1327.79106"	"1327.79354"	"-1.86"	"-0.00124"	"6/66"	"6"	"66"	"2100774.30548096"	"HCD"	"MS2"	"45.5612"	"91.3"	"100.000"	"74.5592"	"24888"	"24888"	"24863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.0"	""	"119.7"	""	"124.3"	""	"140.7"	"1.4"	"153.9"	"190.3"	""	"466"	"20"	"33.000"	"26.000"	"0.215951348847388"	"21"	"0.0001889"	"0.0003909"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSLIPWIR"	"[R].vDSLIPWIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"664.39954"	"1327.79180"	"1327.79354"	"-1.31"	"-0.00087"	"6/66"	"6"	"66"	"1948482.3326416"	"HCD"	"MS2"	"47.67887"	"89.2"	"100.000"	"74.5594"	"24836"	"24836"	"24817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.7"	""	"120.2"	""	"134.5"	""	"142.7"	""	"152.8"	"178.8"	""	"458"	"28"	"33.000"	"26.000"	"0.0376561124616219"	"22"	"0.0001889"	"0.0008289"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLEYFK"	"[R].gLLEYFk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q6PST4; Q0ZHH6"	"Atlastin-1 OS=Rattus norvegicus OX=10116 GN=Atl1 PE=1 SV=1; Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"664.40448"	"1327.80168"	"1327.80260"	"-0.69"	"-0.00046"	"9/48"	"9"	"48"	"4888783.1663208"	"HCD"	"MS2"	"14.1091"	"408.9"	"100.000"	"62.6699"	"20043"	"20043"	"20019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"476.6"	""	"520.4"	""	"593.0"	""	"726.4"	""	"806.8"	"764.3"	""	"403"	"20"	"33.000"	"26.000"	"0.198278237810869"	"16"	"0.0006737"	"0.00663"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLEYFK"	"[R].gLLEYFk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q6PST4; Q0ZHH6"	"Atlastin-1 OS=Rattus norvegicus OX=10116 GN=Atl1 PE=1 SV=1; Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.40533"	"1327.80339"	"1327.80260"	"0.60"	"0.00040"	"12/48"	"12"	"48"	"2903958.13024902"	"HCD"	"MS2"	"6.654433"	"226.1"	"100.000"	"62.9717"	"20166"	"20166"	"20147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.2"	""	"268.6"	""	"308.2"	""	"383.9"	"1.2"	"443.1"	"441.5"	""	"401"	"33"	"33.000"	"26.000"	"0.0106442331068313"	"15"	"0.0005564"	"0.003441"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLEYFK"	"[R].gLLEYFk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q6PST4; Q0ZHH6"	"Atlastin-1 OS=Rattus norvegicus OX=10116 GN=Atl1 PE=1 SV=1; Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"664.40540"	"1327.80351"	"1327.80260"	"0.69"	"0.00046"	"12/48"	"12"	"48"	"4421455.09387207"	"HCD"	"MS2"	"18.71379"	"378.8"	"100.000"	"62.5468"	"19940"	"19940"	"19913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"500.0"	""	"471.7"	""	"539.9"	""	"636.6"	""	"727.6"	"720.7"	""	"401"	"35"	"33.000"	"26.000"	"0.00601332085057024"	"21"	"0.0006037"	"0.004218"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLEYFK"	"[R].gLLEYFk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q6PST4; Q0ZHH6"	"Atlastin-1 OS=Rattus norvegicus OX=10116 GN=Atl1 PE=1 SV=1; Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"664.40576"	"1327.80425"	"1327.80260"	"1.24"	"0.00083"	"12/48"	"12"	"48"	"3279939.17663574"	"HCD"	"MS2"	"1.52598"	"280.3"	"100.000"	"62.8395"	"20059"	"20059"	"20041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"359.8"	""	"335.1"	""	"395.9"	""	"460.8"	""	"533.8"	"575.8"	""	"396"	"37"	"32.000"	"25.000"	"0.00437184937137742"	"16"	"0.0003839"	"0.001846"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELNGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"443.28198"	"1327.83139"	"1327.83496"	"-2.68"	"-0.00119"	"9/60"	"9"	"60"	"5829658.83648682"	"HCD"	"MS2"	"39.56124"	"252.6"	"100.000"	"43.3398"	"12180"	"12180"	"12166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"420.3"	""	"381.9"	""	"365.2"	""	"366.4"	"0.8"	"405.0"	"449.4"	""	"319"	"16"	"32.000"	"25.000"	"0.40809444896145"	"20"	"0.0007076"	"0.006815"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVALNPDK"	"[R].lVALNPDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"664.41937"	"1327.83147"	"1327.83496"	"-2.63"	"-0.00174"	"12/62"	"12"	"62"	"11583149.4204712"	"HCD"	"MS2"	"26.11948"	"739.8"	"96.359"	"42.0747"	"11668"	"11668"	"11649"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"988.7"	""	"936.6"	""	"925.2"	""	"1232.4"	""	"1476.7"	"1462.8"	""	"319"	"37"	"32.000"	"25.000"	"0.00340220663646879"	"22"	"0.0002277"	"0.001291"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVALNPDK"	"[R].lVALNPDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"664.41956"	"1327.83183"	"1327.83496"	"-2.35"	"-0.00156"	"12/62"	"12"	"62"	"10147400.0726929"	"HCD"	"MS2"	"34.61859"	"649.2"	"96.869"	"41.8293"	"11523"	"11523"	"11505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"866.2"	""	"808.1"	""	"842.4"	""	"1092.5"	""	"1279.2"	"1275.4"	""	"319"	"35"	"32.000"	"25.000"	"0.00512578855913131"	"22"	"0.0002277"	"0.001186"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELNGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"443.28223"	"1327.83213"	"1327.83496"	"-2.13"	"-0.00094"	"7/60"	"7"	"60"	"5674312.04260254"	"HCD"	"MS2"	"22.19382"	"255.7"	"100.000"	"43.0929"	"12033"	"12033"	"12027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"436.2"	""	"373.7"	""	"388.8"	""	"373.2"	""	"393.4"	"452.7"	""	"313"	"22"	"31.000"	"24.000"	"0.105078615482911"	"24"	"0.0006037"	"0.005019"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELNGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"664.41998"	"1327.83269"	"1327.83496"	"-1.71"	"-0.00113"	"7/60"	"7"	"60"	"18839144.6287842"	"HCD"	"MS2"	"7.514153"	"592.0"	"54.790"	"43.3307"	"12176"	"12176"	"12166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1057.6"	""	"867.6"	""	"869.0"	""	"826.2"	""	"906.9"	"1068.4"	""	"311"	"41"	"31.000"	"24.000"	"0.00116072781932765"	""	"0.0003839"	"0.002008"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELNGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"664.42004"	"1327.83281"	"1327.83496"	"-1.62"	"-0.00107"	"7/60"	"7"	"60"	"8305133.36157227"	"HCD"	"MS2"	"11.05433"	"553.9"	"97.641"	"43.3462"	"12132"	"12132"	"12117"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"880.7"	""	"832.4"	""	"871.5"	""	"771.1"	"24.7"	"817.8"	"1038.6"	""	"311"	"30"	"31.000"	"24.000"	"0.0144122037535489"	"20"	"0.0005564"	"0.003485"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"664.42023"	"1327.83318"	"1327.83496"	"-1.34"	"-0.00089"	"7/60"	"7"	"60"	"32740814.6289063"	"HCD"	"MS2"	"6.818326"	"715.6"	"34.174"	"50.9748"	"15236"	"15236"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"950.4"	""	"912.3"	""	"1015.0"	""	"1349.2"	""	"1155.7"	"1398.4"	""	"311"	"48"	"31.000"	"24.000"	"0.000228944594128288"	""	"0.0003839"	"0.001671"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELNGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"664.42041"	"1327.83354"	"1327.83496"	"-1.07"	"-0.00071"	"7/60"	"7"	"60"	"15551558.2963867"	"HCD"	"MS2"	"14.20419"	"596.8"	"62.578"	"43.0425"	"12014"	"12014"	"12010"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1037.6"	""	"851.3"	""	"802.6"	""	"903.7"	""	"961.5"	"1095.0"	""	"311"	"37"	"31.000"	"24.000"	"0.00301807753965677"	""	"0.0003839"	"0.0019"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"443.28275"	"1327.83368"	"1327.83496"	"-0.96"	"-0.00043"	"6/60"	"6"	"60"	"10592356.8568726"	"HCD"	"MS2"	"6.196726"	"332.4"	"100.000"	"50.9544"	"15278"	"15278"	"15254"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"417.5"	""	"427.8"	""	"469.5"	""	"666.1"	""	"554.2"	"618.3"	""	"311"	"40"	"31.000"	"24.000"	"0.00158026671741393"	"24"	"0.000523"	"0.002807"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"664.42053"	"1327.83379"	"1327.83496"	"-0.88"	"-0.00059"	"7/60"	"7"	"60"	"24061594.269043"	"HCD"	"MS2"	"0"	"478.6"	"29.142"	"51.2836"	"15363"	"15363"	"15346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"559.8"	""	"598.4"	""	"734.1"	""	"884.6"	""	"789.5"	"972.2"	""	"311"	"37"	"31.000"	"24.000"	"0.00321166614228537"	"24"	"0.0003839"	"0.001953"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"443.28278"	"1327.83377"	"1327.83496"	"-0.89"	"-0.00039"	"6/60"	"6"	"60"	"9878317.16210938"	"HCD"	"MS2"	"8.09293"	"242.0"	"78.544"	"51.5777"	"15533"	"15533"	"15510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.5"	""	"294.4"	""	"356.9"	""	"437.0"	""	"424.5"	"502.6"	""	"311"	"35"	"31.000"	"24.000"	"0.00490603218934755"	""	"0.000523"	"0.003009"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"443.28284"	"1327.83396"	"1327.83496"	"-0.75"	"-0.00033"	"6/60"	"6"	"60"	"9983467.8729248"	"HCD"	"MS2"	"5.444125"	"315.7"	"100.000"	"50.7474"	"15143"	"15143"	"15122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"410.2"	""	"425.0"	""	"448.3"	""	"605.8"	""	"515.5"	"590.0"	""	"311"	"37"	"31.000"	"24.000"	"0.00344136227343677"	"21"	"0.0006037"	"0.004674"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNIVIAK"	"[K].dPNIVIAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"664.42065"	"1327.83403"	"1327.83496"	"-0.70"	"-0.00046"	"7/66"	"7"	"66"	"4618621.37609863"	"HCD"	"MS2"	"35.15375"	"309.6"	"100.000"	"40.4115"	"10987"	"10987"	"10957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"402.6"	""	"353.9"	""	"388.4"	""	"531.6"	""	"624.8"	"640.7"	""	"311"	"50"	"31.000"	"24.000"	"0.000161335668659701"	"21"	"0.0001889"	"0.0005127"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"443.28287"	"1327.83405"	"1327.83496"	"-0.68"	"-0.00030"	"6/60"	"6"	"60"	"9415980.40588379"	"HCD"	"MS2"	"6.613622"	"298.9"	"100.000"	"51.3733"	"15399"	"15399"	"15378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"354.1"	""	"366.3"	""	"447.7"	""	"544.5"	""	"513.2"	"610.8"	""	"311"	"37"	"31.000"	"24.000"	"0.00344136227343677"	"21"	"0.0004166"	"0.002526"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"664.42084"	"1327.83440"	"1327.83496"	"-0.42"	"-0.00028"	"7/60"	"7"	"60"	"34538179.0487061"	"HCD"	"MS2"	"4.609708"	"870.9"	"40.584"	"51.1751"	"15368"	"15368"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1093.2"	""	"1150.9"	""	"1251.7"	""	"1646.7"	""	"1412.9"	"1697.4"	""	"311"	"48"	"31.000"	"24.000"	"0.000228944594128288"	""	"0.000494"	"0.002701"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"443.28305"	"1327.83460"	"1327.83496"	"-0.27"	"-0.00012"	"6/60"	"6"	"60"	"22594380.1566162"	"HCD"	"MS2"	"4.734791"	"399.5"	"58.102"	"51.0554"	"15269"	"15269"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"486.3"	""	"494.0"	""	"586.1"	""	"761.8"	""	"675.1"	"786.5"	""	"311"	"38"	"31.000"	"24.000"	"0.0023535877413183"	"22"	"0.0006037"	"0.004767"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNIVIAK"	"[K].dPNIVIAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"664.42096"	"1327.83464"	"1327.83496"	"-0.24"	"-0.00016"	"12/66"	"12"	"66"	"3614683.0579834"	"HCD"	"MS2"	"4.436949"	"270.8"	"100.000"	"40.3297"	"10909"	"10909"	"10885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.2"	""	"326.0"	""	"353.5"	""	"459.6"	"0.7"	"552.6"	"554.2"	""	"311"	"40"	"31.000"	"24.000"	"0.00156577874506456"	"21"	"0.0001889"	"0.0006859"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"664.42096"	"1327.83464"	"1327.83496"	"-0.24"	"-0.00016"	"7/60"	"7"	"60"	"6790621.42205811"	"HCD"	"MS2"	"5.283363"	"465.6"	"100.000"	"50.6622"	"15108"	"15108"	"15090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"602.2"	""	"645.8"	""	"637.9"	""	"888.2"	"1.3"	"781.5"	"851.6"	""	"311"	"48"	"31.000"	"24.000"	"0.000241396180048482"	""	"0.0001889"	"0.0005197"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"443.28308"	"1327.83469"	"1327.83496"	"-0.20"	"-0.00009"	"6/60"	"6"	"60"	"24703569.0333252"	"HCD"	"MS2"	"3.821223"	"388.9"	"50.935"	"51.2558"	"15401"	"15401"	"15382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"482.7"	""	"514.0"	""	"546.8"	""	"734.3"	""	"665.8"	"743.6"	""	"309"	"37"	"31.000"	"24.000"	"0.00341923132634071"	"21"	"0.00103"	"0.01144"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"664.42108"	"1327.83489"	"1327.83496"	"-0.05"	"-0.00004"	"12/60"	"12"	"60"	"7213036.58459473"	"HCD"	"MS2"	"8.629741"	"508.6"	"100.000"	"50.8695"	"15243"	"15243"	"15222"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"676.5"	""	"699.4"	""	"679.3"	""	"978.1"	""	"840.7"	"942.0"	""	"309"	"40"	"31.000"	"24.000"	"0.00148569097010276"	"21"	"0.0001889"	"0.0008091"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].lDLLGNPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"664.42145"	"1327.83562"	"1327.83496"	"0.50"	"0.00033"	"7/60"	"7"	"60"	"20272016.3677979"	"HCD"	"MS2"	"0.3274087"	"847.8"	"65.123"	"51.4834"	"15495"	"15495"	"15478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1034.0"	""	"1043.6"	""	"1250.4"	""	"1569.4"	""	"1418.4"	"1717.2"	""	"310"	"36"	"31.000"	"24.000"	"0.00402097801128416"	"22"	"0.0003839"	"0.001673"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILPSIISSR"	"[K].lILPSIISSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"443.28827"	"1327.85025"	"1327.85105"	"-0.60"	"-0.00027"	"7/80"	"7"	"80"	"2929713.09143066"	"HCD"	"MS2"	"3.415729"	"24.9"	"100.000"	"64.8197"	"20921"	"20921"	"20899"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.5"	""	"36.0"	""	"33.3"	""	"43.9"	""	"45.7"	"45.8"	""	"247"	"48"	"30.000"	"23.000"	"0.000196185523451826"	""	"0.0001308"	"0.0003027"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILPSIISSR"	"[K].lILPSIISSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"664.42926"	"1327.85124"	"1327.85105"	"0.14"	"0.00010"	"9/80"	"9"	"80"	"40520150.6223145"	"HCD"	"MS2"	"1.372463"	"323.5"	"24.105"	"64.9235"	"20964"	"20964"	"20947"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"416.8"	""	"429.4"	""	"488.6"	""	"534.2"	"0.6"	"557.4"	"637.7"	""	"246"	"45"	"30.000"	"23.000"	"0.00035967074247473"	""	"0.0001889"	"0.0004786"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILPSIISSR"	"[K].lILPSIISSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"664.42932"	"1327.85137"	"1327.85105"	"0.24"	"0.00016"	"9/80"	"9"	"80"	"43730924.2634277"	"HCD"	"MS2"	"0.6630751"	"263.6"	"17.100"	"64.9111"	"20906"	"20906"	"20889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.7"	""	"348.4"	""	"409.3"	""	"431.3"	""	"454.1"	"521.4"	""	"246"	"45"	"30.000"	"23.000"	"0.000380106338199172"	""	"0.0001889"	"0.0004659"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILPSIISSR"	"[K].lILPSIISSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"664.42950"	"1327.85173"	"1327.85105"	"0.51"	"0.00034"	"7/80"	"7"	"80"	"10382388.7252197"	"HCD"	"MS2"	"17.05401"	"360.2"	"100.000"	"64.6019"	"20779"	"20779"	"20761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"471.1"	""	"494.3"	""	"530.0"	""	"615.5"	""	"642.8"	"661.8"	""	"242"	"36"	"30.000"	"23.000"	"0.00283651686653711"	""	"0.0001308"	"0.000297"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILPSIISSR"	"[K].lILPSIISSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"664.43188"	"1327.85649"	"1327.85105"	"4.10"	"0.00272"	"9/80"	"9"	"80"	"12367225.8209229"	"HCD"	"MS2"	"18.47201"	"424.2"	"100.000"	"64.6168"	"20838"	"20838"	"20819"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"582.8"	""	"591.5"	""	"612.8"	""	"743.4"	""	"722.9"	"770.4"	""	"229"	"38"	"30.000"	"23.000"	"0.00184844054756633"	""	"0.0001859"	"0.0003349"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANYIDK"	"[R].fANYIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"443.59131"	"1328.75937"	"1328.76146"	"-1.57"	"-0.00070"	"4/56"	"4"	"56"	"4805637.11523438"	"HCD"	"MS2"	"52.95137"	"216.4"	"100.000"	"44.0132"	"12404"	"12404"	"12374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.9"	""	"359.5"	""	"311.7"	""	"313.5"	""	"380.5"	"426.7"	""	"622"	"10"	"34.000"	"27.000"	"3.37878368944907"	"14"	"0.008122"	"0.3428"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANYIDK"	"[R].fANYIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"664.88403"	"1328.76079"	"1328.76146"	"-0.50"	"-0.00033"	"12/56"	"12"	"56"	"3487507.79864502"	"HCD"	"MS2"	"33.65357"	"339.8"	"100.000"	"43.7013"	"12277"	"12277"	"12250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"444.9"	""	"559.1"	""	"452.2"	""	"515.0"	""	"589.6"	"660.3"	""	"626"	"34"	"34.000"	"27.000"	"0.0113121287006199"	"24"	"0.000523"	"0.003115"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANYIDK"	"[R].fANYIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"664.88403"	"1328.76079"	"1328.76146"	"-0.50"	"-0.00033"	"12/56"	"12"	"56"	"33419140.2387695"	"HCD"	"MS2"	"0"	"821.2"	"29.448"	"43.9812"	"12391"	"12391"	"12374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"986.4"	""	"1368.1"	""	"1155.1"	""	"1096.4"	"4.2"	"1502.0"	"1673.6"	""	"626"	"35"	"34.000"	"27.000"	"0.00927992224921119"	"25"	"0.00119"	"0.01568"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANYIDK"	"[R].fANYIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"664.88409"	"1328.76091"	"1328.76146"	"-0.41"	"-0.00027"	"12/56"	"12"	"56"	"3674412.96575928"	"HCD"	"MS2"	"13.82682"	"338.3"	"100.000"	"43.9467"	"12426"	"12426"	"12400"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"415.1"	""	"544.6"	""	"486.3"	""	"488.2"	""	"618.1"	"657.7"	""	"626"	"34"	"34.000"	"27.000"	"0.0111312602712092"	"24"	"0.0003839"	"0.002067"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANYIDK"	"[R].fANYIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"443.59192"	"1328.76120"	"1328.76146"	"-0.19"	"-0.00009"	"4/56"	"4"	"56"	"6001697.57531738"	"HCD"	"MS2"	"16.2167"	"266.0"	"100.000"	"44.2978"	"12570"	"12570"	"12540"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"352.4"	""	"395.9"	""	"388.9"	""	"372.4"	"1.1"	"489.3"	"520.7"	""	"619"	"8"	"34.000"	"27.000"	"4.60957253551528"	"13"	"0.007874"	"0.3204"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFGEVFK"	"[K].gSFGEVFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"664.88434"	"1328.76140"	"1328.76146"	"-0.04"	"-0.00003"	"7/62"	"7"	"62"	"3757008.27911377"	"HCD"	"MS2"	"0"	"347.4"	"100.000"	"45.1012"	"12896"	"12896"	"12875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"460.6"	""	"462.4"	""	"507.3"	""	"553.7"	"1.4"	"639.1"	"667.5"	""	"619"	"30"	"34.000"	"27.000"	"0.0283570241692759"	"25"	"0.0001889"	"0.0006874"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANYIDK"	"[R].fANYIDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"664.88452"	"1328.76177"	"1328.76146"	"0.23"	"0.00015"	"12/56"	"12"	"56"	"27995844.2631836"	"HCD"	"MS2"	"0"	"1242.5"	"55.964"	"44.2311"	"12542"	"12542"	"12524"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1474.4"	""	"2054.6"	""	"1755.3"	""	"1629.0"	""	"2281.2"	"2591.4"	""	"619"	"35"	"34.000"	"27.000"	"0.00888506590136641"	"25"	"0.001217"	"0.01784"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFGEVFK"	"[K].gSFGEVFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"664.88495"	"1328.76262"	"1328.76146"	"0.87"	"0.00058"	"5/62"	"5"	"62"	"4298582.80914307"	"HCD"	"MS2"	"18.00042"	"354.9"	"100.000"	"44.9244"	"12775"	"12775"	"12752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"562.0"	""	"499.5"	""	"509.8"	""	"531.1"	"1.9"	"636.4"	"618.7"	""	"631"	"13"	"34.000"	"28.000"	"1.53815238627619"	"15"	"0.0003839"	"0.001976"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALADVATVLAR"	"[K].aLADVATVLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CGU6"	"Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1"	"Q8CGU6"	"Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"664.90845"	"1328.80962"	"1328.80992"	"-0.22"	"-0.00015"	"10/86"	"10"	"86"	"2678272.10925293"	"HCD"	"MS2"	"14.89941"	"198.5"	"100.000"	"58.4716"	"18334"	"18334"	"18309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"259.2"	""	"244.3"	""	"279.2"	""	"356.9"	""	"373.2"	"372.5"	""	"546"	"36"	"34.000"	"27.000"	"0.00733099033664772"	"18"	"0"	"2.071E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"664.91266"	"1328.81804"	"1328.81897"	"-0.70"	"-0.00047"	"6/60"	"6"	"60"	"7857171.64007568"	"HCD"	"MS2"	"29.40497"	"410.5"	"100.000"	"47.0962"	"13659"	"13659"	"13640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"599.2"	""	"509.9"	""	"548.1"	""	"658.8"	"1.4"	"739.0"	"833.9"	""	"485"	"45"	"33.000"	"26.000"	"0.00075807424652756"	""	"0.00103"	"0.01187"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"664.91278"	"1328.81828"	"1328.81897"	"-0.52"	"-0.00034"	"7/60"	"7"	"60"	"8293062.12939453"	"HCD"	"MS2"	"14.75007"	"386.0"	"100.000"	"46.9389"	"13643"	"13643"	"13618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"632.8"	""	"430.8"	""	"475.9"	""	"629.2"	"1.8"	"685.2"	"802.0"	""	"485"	"45"	"33.000"	"26.000"	"0.00077039196213257"	""	"0.0001889"	"0.000576"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"664.91284"	"1328.81841"	"1328.81897"	"-0.43"	"-0.00028"	"6/60"	"6"	"60"	"8067561.20507813"	"HCD"	"MS2"	"23.0959"	"424.9"	"100.000"	"47.3971"	"13830"	"13830"	"13810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"619.7"	""	"546.3"	""	"561.0"	""	"677.3"	""	"781.9"	"844.2"	""	"485"	"45"	"33.000"	"26.000"	"0.000808559050950845"	"25"	"0.0008453"	"0.008293"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"664.91357"	"1328.81987"	"1328.81897"	"0.68"	"0.00045"	"7/60"	"7"	"60"	"7575953.97717285"	"HCD"	"MS2"	"12.81055"	"365.7"	"100.000"	"46.6656"	"13483"	"13483"	"13464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"591.5"	""	"423.3"	""	"435.0"	""	"598.1"	"0.8"	"658.1"	"759.5"	""	"522"	"45"	"34.000"	"27.000"	"0.000836836293695926"	""	"0.0001889"	"0.0007723"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNTGLLTLR"	"[R].lVNTGLLTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"664.92664"	"1328.84599"	"1328.84630"	"-0.23"	"-0.00015"	"8/94"	"8"	"94"	"6111507.21417236"	"HCD"	"MS2"	"6.588487"	"287.8"	"100.000"	"57.9028"	"18047"	"18047"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"421.2"	""	"432.4"	""	"423.1"	""	"462.9"	"3.1"	"478.0"	"502.4"	""	"310"	"36"	"31.000"	"24.000"	"0.00428875955038785"	""	"0.0001308"	"0.0002153"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNTGLLTLR"	"[R].lVNTGLLTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"664.92670"	"1328.84612"	"1328.84630"	"-0.14"	"-0.00009"	"7/94"	"7"	"94"	"6101435.05682373"	"HCD"	"MS2"	"11.95558"	"302.4"	"100.000"	"58.0601"	"18166"	"18166"	"18149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"435.4"	""	"433.1"	""	"461.4"	""	"472.0"	""	"509.3"	"551.6"	""	"308"	"41"	"31.000"	"24.000"	"0.00118992810104738"	""	"0.0001308"	"0.0002064"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLIVGVNK"	"[K].qLIVGVNk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"443.62659"	"1328.86521"	"1328.86659"	"-1.04"	"-0.00046"	"6/72"	"6"	"72"	"39370499.0253906"	"HCD"	"MS2"	"41.80672"	"424.9"	"31.120"	"40.7769"	"11136"	"11136"	"11117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"618.7"	""	"597.6"	""	"639.5"	""	"671.5"	""	"745.9"	"749.8"	""	"202"	"36"	"30.000"	"23.000"	"0.00259609974059655"	""	"0.0004166"	"0.002236"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLIVGVNK"	"[K].qLIVGVNk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"443.62689"	"1328.86612"	"1328.86659"	"-0.35"	"-0.00016"	"4/72"	"4"	"72"	"7001246.56182861"	"HCD"	"MS2"	"39.96978"	"269.9"	"100.000"	"41.1026"	"11270"	"11270"	"11245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"326.1"	""	"303.8"	""	"375.5"	""	"451.6"	""	"571.3"	"536.3"	""	"202"	"21"	"30.000"	"23.000"	"0.0723304844315032"	""	"0.001912"	"0.02719"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLIVGVNK"	"[K].qLIVGVNk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"443.62692"	"1328.86621"	"1328.86659"	"-0.28"	"-0.00013"	"6/72"	"6"	"72"	"33837984.4733887"	"HCD"	"MS2"	"51.89322"	"648.0"	"54.304"	"40.6073"	"11023"	"11023"	"10997"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"962.0"	""	"929.1"	""	"1002.7"	""	"1028.1"	""	"1089.9"	"1123.2"	""	"202"	"34"	"30.000"	"23.000"	"0.00361677401473662"	""	"0.0002277"	"0.001184"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLIVGVNK"	"[K].qLIVGVNk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6458"	"0.0000"	"1"	"1"	"1"	"664.93689"	"1328.86650"	"1328.86659"	"-0.07"	"-0.00004"	"7/72"	"7"	"72"	"35955598.3892212"	"HCD"	"MS2"	"0"	"1660.6"	"75.596"	"40.5890"	"11015"	"11015"	"10997"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2538.7"	""	"2294.4"	""	"2470.6"	""	"2642.9"	""	"2847.9"	"2919.9"	""	"201"	"48"	"30.000"	"23.000"	"0.000152112905467839"	""	"0.000523"	"0.003191"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLIVGVNK"	"[K].qLIVGVNk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"664.93707"	"1328.86687"	"1328.86659"	"0.21"	"0.00014"	"7/72"	"7"	"72"	"11429978.8730469"	"HCD"	"MS2"	"11.5514"	"668.1"	"80.662"	"41.0430"	"11246"	"11246"	"11229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"921.4"	""	"862.9"	""	"930.4"	""	"1034.1"	""	"1282.8"	"1308.9"	""	"201"	"50"	"30.000"	"23.000"	"0.000112503507288449"	""	"0.0003839"	"0.001842"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLIVGVNK"	"[K].qLIVGVNk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6458"	"0.0000"	"1"	"1"	"1"	"664.93713"	"1328.86699"	"1328.86659"	"0.30"	"0.00020"	"7/72"	"7"	"72"	"27925170.0002441"	"HCD"	"MS2"	"4.5245"	"1749.7"	"93.248"	"40.7426"	"11122"	"11122"	"11101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2646.1"	""	"2455.1"	""	"2596.0"	""	"2862.9"	""	"2997.4"	"3002.3"	""	"201"	"48"	"30.000"	"23.000"	"0.000159281765842342"	""	"0.000523"	"0.002923"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLIVGVNK"	"[K].qLIVGVNk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.3043"	"0.0000"	"1"	"1"	"1"	"443.62729"	"1328.86731"	"1328.86659"	"0.54"	"0.00024"	"9/72"	"9"	"72"	"7298693.06396484"	"HCD"	"MS2"	"37.2872"	"274.0"	"100.000"	"40.9192"	"11151"	"11151"	"11125"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.3"	""	"335.7"	""	"354.4"	""	"480.8"	""	"569.3"	"554.1"	""	"201"	"23"	"30.000"	"23.000"	"0.0534768800563129"	""	"0.0007076"	"0.006921"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLIVGVNK"	"[K].qLIVGVNk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"664.93732"	"1328.86736"	"1328.86659"	"0.58"	"0.00038"	"7/72"	"7"	"72"	"9612549.87762451"	"HCD"	"MS2"	"19.29162"	"597.9"	"78.130"	"40.9059"	"11145"	"11145"	"11125"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"750.6"	""	"747.0"	""	"827.1"	""	"973.0"	""	"1199.1"	"1178.9"	""	"201"	"46"	"30.000"	"23.000"	"0.000226029987886496"	""	"0.000523"	"0.002878"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVQQLR"	"[K].kVVQQLR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"443.63010"	"1328.87574"	"1328.87783"	"-1.57"	"-0.00070"	"6/62"	"6"	"62"	"3521882.54315186"	"HCD"	"MS2"	"2.85912"	"252.3"	"100.000"	"27.3564"	"5687"	"5687"	"5666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"302.0"	""	"297.1"	""	"298.6"	""	"390.8"	""	"549.0"	"564.0"	""	"125"	"5"	"27.000"	"20.000"	"1.82759523615208"	"13"	"0.002711"	"0.04055"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVQQLR"	"[K].kVVQQLR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"443.63013"	"1328.87583"	"1328.87783"	"-1.50"	"-0.00067"	"6/62"	"6"	"62"	"3956146.12854004"	"HCD"	"MS2"	"6.5232"	"297.5"	"100.000"	"27.2704"	"5617"	"5617"	"5597"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"343.7"	""	"368.4"	""	"343.7"	""	"481.4"	""	"635.8"	"657.3"	""	"125"	"5"	"27.000"	"20.000"	"1.9855462941561"	"13"	"0.00175"	"0.02386"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHAAPFSK"	"[KR].nHAAPFSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"O88600; Q66HA8"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1;Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"O88600; Q66HA8"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1; Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"443.92709"	"1329.76673"	"1329.76794"	"-0.91"	"-0.00040"	"8/70"	"8"	"70"	"3177458.956604"	"HCD"	"MS2"	"34.90541"	"372.9"	"100.000"	"26.5811"	"5377"	"5377"	"5349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"471.5"	""	"429.2"	""	"489.9"	""	"611.7"	"11.1"	"760.2"	"766.4"	""	"718"	"6"	"35.000"	"28.000"	"9.91047450383104"	"13"	"0.0006037"	"0.004382"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELFPVNR"	"[R].lLELFPVNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"665.40839"	"1329.80950"	"1329.80919"	"0.23"	"0.00015"	"10/66"	"10"	"66"	"1585940.29742432"	"HCD"	"MS2"	"25.70691"	"85.4"	"100.000"	"69.5019"	"22772"	"22772"	"22746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.9"	""	"124.6"	""	"121.6"	""	"124.4"	"1.3"	"152.0"	"164.3"	""	"593"	"29"	"34.000"	"27.000"	"0.0345163367720211"	"22"	"0.000523"	"0.003172"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELFPVNR"	"[R].lLELFPVNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"665.40887"	"1329.81047"	"1329.80919"	"0.97"	"0.00064"	"7/66"	"7"	"66"	"1790942.52301025"	"HCD"	"MS2"	"20.39678"	"90.4"	"100.000"	"69.4173"	"22789"	"22789"	"22762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.4"	""	"119.5"	""	"134.3"	""	"132.2"	"0.0"	"163.9"	"168.2"	""	"611"	"35"	"34.000"	"27.000"	"0.0102567841151223"	"23"	"0.0001889"	"0.0008871"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDVGLIAIR"	"[K].lMDVGLIAIR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"665.40955"	"1329.81182"	"1329.81256"	"-0.56"	"-0.00037"	"8/72"	"8"	"72"	"6988786.83258057"	"HCD"	"MS2"	"15.25665"	"299.3"	"100.000"	"68.2229"	"22301"	"22301"	"22282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"466.5"	""	"509.6"	""	"492.4"	""	"309.2"	""	"509.8"	"545.5"	""	"572"	"53"	"34.000"	"27.000"	"0.000151135342007701"	"20"	"0"	"9.31E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDVGLIAIR"	"[K].lMDVGLIAIR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.40967"	"1329.81206"	"1329.81256"	"-0.38"	"-0.00025"	"9/72"	"9"	"72"	"1974405.53594971"	"HCD"	"MS2"	"37.00381"	"100.8"	"100.000"	"68.6303"	"22416"	"22416"	"22394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.1"	""	"147.3"	""	"178.3"	""	"136.0"	""	"179.9"	"172.3"	""	"572"	"23"	"34.000"	"27.000"	"0.154300038039326"	"14"	"0.0001889"	"0.0005019"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDVGLIAIR"	"[K].lMDVGLIAIR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"665.41046"	"1329.81365"	"1329.81256"	"0.82"	"0.00054"	"8/72"	"8"	"72"	"6230295.60473633"	"HCD"	"MS2"	"25.6669"	"275.2"	"100.000"	"68.3144"	"22287"	"22287"	"22266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"427.0"	""	"435.2"	""	"454.6"	""	"301.1"	""	"474.3"	"515.4"	""	"571"	"40"	"34.000"	"27.000"	"0.00304513192611239"	"18"	"0"	"9.509E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTISINK"	"[KR].vPTISINk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163; P52481"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3; Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"665.42792"	"1329.84856"	"1329.85061"	"-1.54"	"-0.00102"	"7/62"	"7"	"62"	"6412306.52636719"	"HCD"	"MS2"	"12.05671"	"374.9"	"100.000"	"44.4128"	"12566"	"12566"	"12555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"556.2"	""	"472.7"	""	"506.7"	""	"597.7"	""	"717.2"	"704.1"	""	"380"	"45"	"32.000"	"25.000"	"0.000663366599409313"	"23"	"0.0001889"	"0.0008813"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTISINK"	"[KR].vPTISINk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163; P52481"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3; Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"665.42828"	"1329.84929"	"1329.85061"	"-0.99"	"-0.00066"	"7/62"	"7"	"62"	"6834797.64404297"	"HCD"	"MS2"	"11.6823"	"390.6"	"100.000"	"44.6763"	"12723"	"12723"	"12705"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"588.8"	""	"499.5"	""	"526.3"	""	"605.9"	""	"746.0"	"738.4"	""	"380"	"45"	"32.000"	"25.000"	"0.000672594948058526"	"22"	"0.0001889"	"0.0008582"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTISINK"	"[KR].vPTISINk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163; P52481"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3; Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cap2 PE=1 SV=1"	"0"	"3"	"3"	"0.4762"	"0.0000"	"1"	"1"	"1"	"443.95486"	"1329.85004"	"1329.85061"	"-0.43"	"-0.00019"	"7/62"	"7"	"62"	"14095911.5949707"	"HCD"	"MS2"	"9.238585"	"497.9"	"100.000"	"44.3991"	"12611"	"12611"	"12588"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"748.7"	""	"681.9"	""	"728.1"	""	"765.0"	""	"909.3"	"882.8"	""	"380"	"21"	"32.000"	"25.000"	"0.144129739255545"	"25"	"0.000494"	"0.002674"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTISINK"	"[KR].vPTISINk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163; P52481"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3; Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"665.42883"	"1329.85039"	"1329.85061"	"-0.16"	"-0.00011"	"7/62"	"7"	"62"	"42505853.8352051"	"HCD"	"MS2"	"29.56865"	"629.8"	"26.490"	"44.1421"	"12456"	"12456"	"12438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"885.8"	""	"902.6"	""	"918.9"	""	"933.3"	""	"1165.1"	"1168.7"	""	"378"	"45"	"32.000"	"25.000"	"0.00060738184180302"	"21"	"0.0008125"	"0.007545"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTISINK"	"[KR].vPTISINk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163; P52481"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3; Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"665.42889"	"1329.85051"	"1329.85061"	"-0.07"	"-0.00005"	"7/62"	"7"	"62"	"43303738.9453125"	"HCD"	"MS2"	"38.11383"	"535.9"	"21.935"	"44.3832"	"12605"	"12605"	"12588"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"783.7"	""	"791.7"	""	"769.4"	""	"769.5"	""	"970.6"	"996.5"	""	"379"	"47"	"32.000"	"25.000"	"0.000378973824295405"	"21"	"0.0009404"	"0.01013"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTISINK"	"[KR].vPTISINk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163; P52481"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3; Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cap2 PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"443.95526"	"1329.85123"	"1329.85061"	"0.47"	"0.00021"	"9/62"	"9"	"62"	"14487311.0785522"	"HCD"	"MS2"	"15.9496"	"507.7"	"100.000"	"44.1123"	"12444"	"12444"	"12422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"735.4"	"12.3"	"715.4"	""	"720.9"	""	"799.9"	""	"926.2"	"902.5"	""	"379"	"24"	"32.000"	"25.000"	"0.0844518590713269"	"24"	"0.0002723"	"0.001372"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVVQVLK"	"[R].wVVQVLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"665.43634"	"1329.86540"	"1329.86586"	"-0.35"	"-0.00023"	"12/56"	"12"	"56"	"10892477.0900269"	"HCD"	"MS2"	"12.91861"	"700.1"	"100.000"	"59.0171"	"18552"	"18552"	"18533"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"891.9"	""	"1033.1"	""	"1053.1"	""	"1182.0"	""	"1239.6"	"1230.7"	""	"305"	"39"	"31.000"	"24.000"	"0.00211480263902963"	"21"	"0.0007793"	"0.007406"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVVQVLK"	"[R].wVVQVLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"665.43683"	"1329.86638"	"1329.86586"	"0.39"	"0.00026"	"12/56"	"12"	"56"	"1583658.46575928"	"HCD"	"MS2"	"11.20322"	"121.2"	"100.000"	"59.2105"	"18577"	"18577"	"18553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.7"	""	"167.6"	""	"173.2"	""	"206.8"	"1.0"	"226.1"	"224.1"	""	"305"	"37"	"31.000"	"24.000"	"0.00271812762035833"	"20"	"0.0003839"	"0.001595"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVVQVLK"	"[R].wVVQVLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"665.43713"	"1329.86699"	"1329.86586"	"0.85"	"0.00056"	"12/56"	"12"	"56"	"1868460.35137939"	"HCD"	"MS2"	"7.770408"	"137.6"	"100.000"	"59.3415"	"18684"	"18684"	"18661"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.1"	""	"176.9"	""	"209.8"	""	"233.2"	"1.6"	"255.6"	"254.4"	""	"305"	"34"	"31.000"	"24.000"	"0.00571833828424363"	"20"	"0.0003839"	"0.001672"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVVQVLK"	"[R].wVVQVLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"665.43719"	"1329.86711"	"1329.86586"	"0.94"	"0.00062"	"12/56"	"12"	"56"	"11627499.5361938"	"HCD"	"MS2"	"11.14246"	"715.8"	"100.000"	"58.8799"	"18443"	"18443"	"18425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"880.7"	""	"1041.2"	""	"1062.0"	""	"1237.2"	"0.2"	"1285.8"	"1273.8"	""	"305"	"39"	"31.000"	"24.000"	"0.00205716839595227"	"21"	"0.0008731"	"0.009381"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAGAAK"	"[K].kPAGAAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"443.96503"	"1329.88053"	"1329.88213"	"-1.21"	"-0.00053"	"9/62"	"9"	"62"	"90875442.394043"	"HCD"	"MS2"	"5.472107"	"1193.7"	"17.781"	"24.2237"	"4416"	"4416"	"4397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1618.9"	""	"2013.9"	""	"2480.7"	""	"1610.9"	""	"2232.3"	"1371.6"	""	"243"	"12"	"30.000"	"23.000"	"0.692749590821109"	"13"	"0.000523"	"0.003156"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAGAAK"	"[K].kPAGAAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"443.96509"	"1329.88071"	"1329.88213"	"-1.07"	"-0.00047"	"9/62"	"9"	"62"	"49225161.3706055"	"HCD"	"MS2"	"6.745328"	"3081.4"	"76.125"	"24.1393"	"4348"	"4348"	"4326"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4143.6"	""	"5264.7"	""	"6289.8"	""	"4269.3"	""	"5819.8"	"3454.1"	""	"243"	"12"	"30.000"	"23.000"	"0.793553621466679"	"13"	"0.0003839"	"0.001872"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAGAAK"	"[K].kPAGAAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"665.44427"	"1329.88127"	"1329.88213"	"-0.65"	"-0.00043"	"6/62"	"6"	"62"	"2199050.71038818"	"HCD"	"MS2"	"0"	"144.4"	"100.000"	"24.2695"	"4435"	"4435"	"4413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"206.6"	""	"234.0"	""	"285.5"	""	"207.6"	""	"263.6"	"173.4"	""	"243"	"17"	"30.000"	"23.000"	"0.226765132436413"	"16"	"0.0004166"	"0.00237"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAGAAK"	"[K].kPAGAAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"665.44446"	"1329.88164"	"1329.88213"	"-0.37"	"-0.00025"	"6/62"	"6"	"62"	"2341472.03057861"	"HCD"	"MS2"	"0"	"146.8"	"100.000"	"24.2149"	"4379"	"4379"	"4358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.8"	""	"236.6"	""	"294.3"	""	"193.7"	""	"267.4"	"170.3"	""	"243"	"16"	"30.000"	"23.000"	"0.324770278652592"	"16"	"0.0006037"	"0.0046"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSLGLK"	"[K].lLQSLGLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"665.44666"	"1329.88603"	"1329.88699"	"-0.72"	"-0.00048"	"14/66"	"14"	"66"	"3923153.7923584"	"HCD"	"MS2"	"9.879537"	"269.8"	"100.000"	"63.6052"	"20425"	"20425"	"20403"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"368.6"	""	"346.4"	""	"438.8"	""	"450.8"	"3.7"	"456.6"	"489.2"	""	"243"	"50"	"30.000"	"23.000"	"0.000115232843291059"	""	"0.0001889"	"0.0005632"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQGSILK"	"[R].lIQGSILk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"0"	"2"	"2"	"0.1852"	"0.0000"	"1"	"1"	"1"	"665.44672"	"1329.88616"	"1329.88699"	"-0.63"	"-0.00042"	"10/66"	"10"	"66"	"6061352.40991211"	"HCD"	"MS2"	"50.44951"	"430.3"	"100.000"	"48.8105"	"14361"	"14361"	"14335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"623.3"	""	"551.1"	""	"642.5"	""	"682.1"	""	"785.2"	"796.1"	""	"243"	"27"	"30.000"	"23.000"	"0.0265201684288925"	""	"0.000523"	"0.003103"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSLGLK"	"[K].lLQSLGLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"665.44702"	"1329.88677"	"1329.88699"	"-0.17"	"-0.00011"	"14/66"	"14"	"66"	"3430330.58972168"	"HCD"	"MS2"	"10.24986"	"235.5"	"100.000"	"63.5124"	"20334"	"20334"	"20313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"346.3"	""	"284.3"	""	"376.8"	""	"381.3"	""	"420.9"	"421.0"	""	"243"	"50"	"30.000"	"23.000"	"0.00011183462296801"	""	"0.0001889"	"0.0007095"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQGSILK"	"[R].lIQGSILk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"0"	"2"	"2"	"0.2424"	"0.0000"	"1"	"1"	"1"	"665.44720"	"1329.88713"	"1329.88699"	"0.10"	"0.00007"	"6/66"	"6"	"66"	"6819680.88647461"	"HCD"	"MS2"	"52.33585"	"445.1"	"100.000"	"49.0857"	"14521"	"14521"	"14495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"665.1"	""	"596.6"	""	"655.8"	""	"672.5"	""	"788.4"	"843.0"	""	"243"	"33"	"30.000"	"23.000"	"0.00597828035852963"	""	"0.0003146"	"0.001463"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDFSNK"	"[K].yVDFSNk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"444.25143"	"1330.73975"	"1330.74072"	"-0.73"	"-0.00032"	"7/54"	"7"	"54"	"5418543.19598389"	"HCD"	"MS2"	"26.90567"	"214.7"	"100.000"	"39.6658"	"10684"	"10684"	"10654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"233.4"	""	"258.7"	""	"254.1"	""	"359.9"	""	"454.8"	"481.0"	""	"835"	"7"	"36.000"	"29.000"	"8.64284013120261"	"14"	"0.0008453"	"0.008191"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDFSNK"	"[K].yVDFSNk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"665.87360"	"1330.73992"	"1330.74072"	"-0.61"	"-0.00040"	"10/54"	"10"	"54"	"12424474.8139648"	"HCD"	"MS2"	"0"	"1024.0"	"100.000"	"39.4602"	"10556"	"10556"	"10534"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"986.6"	""	"1131.5"	""	"1026.3"	""	"1726.2"	""	"2403.4"	"2484.8"	""	"838"	"22"	"36.000"	"29.000"	"0.238898830085633"	"19"	"0.001007"	"0.01092"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDFSNK"	"[K].yVDFSNk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"665.87366"	"1330.74004"	"1330.74072"	"-0.51"	"-0.00034"	"10/54"	"10"	"54"	"12584017.137207"	"HCD"	"MS2"	"3.215617"	"1042.5"	"100.000"	"39.5673"	"10643"	"10643"	"10622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1017.0"	""	"1176.7"	""	"996.2"	""	"1823.6"	""	"2356.3"	"2560.5"	""	"840"	"22"	"36.000"	"29.000"	"0.237273529421167"	"19"	"0.0007076"	"0.006856"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDFSNK"	"[K].yVDFSNk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"444.25174"	"1330.74067"	"1330.74072"	"-0.04"	"-0.00002"	"6/54"	"6"	"54"	"6267498.68591309"	"HCD"	"MS2"	"0"	"299.2"	"100.000"	"39.5129"	"10578"	"10578"	"10550"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.1"	""	"346.2"	""	"324.4"	""	"511.5"	""	"648.2"	"683.8"	""	"839"	"16"	"36.000"	"29.000"	"1.15806241068444"	"20"	"0.003107"	"0.06193"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHPLFTFLR"	"[K].aHPLFTFLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"444.26535"	"1330.78150"	"1330.78331"	"-1.36"	"-0.00060"	"6/64"	"6"	"64"	"26833688.9931641"	"HCD"	"MS2"	"4.434489"	"92.5"	"30.915"	"45.2256"	"12898"	"12898"	"12880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.8"	""	"111.7"	""	"152.9"	""	"155.7"	""	"132.5"	"171.4"	""	"840"	"25"	"36.000"	"29.000"	"0.126837972256885"	"14"	"0.0005564"	"0.003617"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHPLFTFLR"	"[K].aHPLFTFLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"444.26547"	"1330.78186"	"1330.78331"	"-1.08"	"-0.00048"	"4/64"	"4"	"64"	"9920238.93890381"	"HCD"	"MS2"	"6.340803"	"124.3"	"100.000"	"45.1794"	"12928"	"12928"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.8"	""	"173.7"	""	"190.6"	""	"231.1"	"0.8"	"194.6"	"201.1"	""	"836"	"23"	"36.000"	"29.000"	"0.230237617097458"	"14"	"0.0001889"	"0.0009349"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHPLFTFLR"	"[K].aHPLFTFLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"444.26559"	"1330.78223"	"1330.78331"	"-0.81"	"-0.00036"	"4/64"	"4"	"64"	"21444744.486084"	"HCD"	"MS2"	"8.011132"	"75.6"	"26.957"	"45.4853"	"13053"	"13053"	"13035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.3"	""	"103.5"	""	"129.9"	""	"125.5"	""	"116.0"	"130.2"	""	"827"	"19"	"36.000"	"29.000"	"0.536383628551865"	"14"	"0.000523"	"0.003267"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHPLFTFLR"	"[K].aHPLFTFLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"444.26605"	"1330.78360"	"1330.78331"	"0.22"	"0.00010"	"4/64"	"4"	"64"	"10421416.7478638"	"HCD"	"MS2"	"7.353998"	"119.5"	"100.000"	"44.9381"	"12781"	"12781"	"12752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.8"	""	"171.6"	""	"185.7"	""	"209.0"	"2.9"	"181.1"	"213.2"	""	"855"	"23"	"36.000"	"29.000"	"0.237102492289507"	"14"	"0.0001889"	"0.0009523"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"P0DMW0; P14659"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.90167"	"1330.79607"	"1330.79824"	"-1.63"	"-0.00108"	"8/66"	"8"	"66"	"736686.709899902"	"HCD"	"MS2"	"100"	"75.7"	"100.000"	"34.1045"	"8359"	"8359"	"8337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.7"	""	"100.1"	""	"116.3"	""	"122.0"	""	"141.1"	"134.6"	""	"742"	"10"	"35.000"	"28.000"	"3.50246585102077"	"13"	"0.0006037"	"0.00534"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIIAAAK"	"[K].gNDIIAAAk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"665.90759"	"1330.80791"	"1330.80947"	"-1.17"	"-0.00078"	"8/78"	"8"	"78"	"3083863.69641113"	"HCD"	"MS2"	"38.06259"	"235.1"	"100.000"	"36.6014"	"9426"	"9426"	"9401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.8"	""	"310.4"	""	"316.1"	""	"382.6"	"0.7"	"434.5"	"442.0"	""	"666"	"42"	"35.000"	"28.000"	"0.00206273878000568"	"28"	"0"	"0.0001352"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIIAAAK"	"[K].gNDIIAAAk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"665.90820"	"1330.80913"	"1330.80947"	"-0.26"	"-0.00017"	"13/78"	"13"	"78"	"4175170.668396"	"HCD"	"MS2"	"39.72704"	"324.5"	"100.000"	"36.4503"	"9321"	"9321"	"9290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.9"	""	"438.1"	""	"433.2"	""	"555.8"	"0.0"	"567.7"	"613.7"	""	"700"	"45"	"35.000"	"28.000"	"0.00115629339362885"	""	"0.0001308"	"0.0002359"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFAVPDK"	"[R].vPFAVPDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P52632"	"Signal transducer and activator of transcription 5B OS=Rattus norvegicus OX=10116 GN=Stat5b PE=1 SV=1"	"Q62771; P52632"	"Signal transducer and activator of transcription 5A OS=Rattus norvegicus OX=10116 GN=Stat5a PE=1 SV=1; Signal transducer and activator of transcription 5B OS=Rattus norvegicus OX=10116 GN=Stat5b PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"665.91144"	"1330.81560"	"1330.81349"	"1.58"	"0.00105"	"6/56"	"6"	"56"	"6018818.93322754"	"HCD"	"MS2"	"40.62008"	"389.4"	"100.000"	"49.3203"	"14617"	"14617"	"14590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"606.3"	""	"512.1"	""	"562.2"	""	"601.8"	""	"679.8"	"726.8"	""	"702"	"19"	"35.000"	"28.000"	"0.395646307117604"	"26"	"0.0006037"	"0.005202"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFAVPDK"	"[R].vPFAVPDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P52632"	"Signal transducer and activator of transcription 5B OS=Rattus norvegicus OX=10116 GN=Stat5b PE=1 SV=1"	"Q62771; P52632"	"Signal transducer and activator of transcription 5A OS=Rattus norvegicus OX=10116 GN=Stat5a PE=1 SV=1; Signal transducer and activator of transcription 5B OS=Rattus norvegicus OX=10116 GN=Stat5b PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"665.91162"	"1330.81597"	"1330.81349"	"1.86"	"0.00124"	"6/56"	"6"	"56"	"6021232.56048584"	"HCD"	"MS2"	"33.77085"	"355.0"	"94.593"	"49.0338"	"14452"	"14452"	"14431"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"534.3"	""	"490.6"	""	"536.5"	""	"549.7"	""	"614.1"	"635.9"	""	"563"	"19"	"34.000"	"27.000"	"0.320242080959295"	"26"	"0.0006396"	"0.00626"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVGVDEK"	"[K].lLVGVDEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"665.92017"	"1330.83306"	"1330.83462"	"-1.18"	"-0.00078"	"12/58"	"12"	"58"	"9190303.33728027"	"HCD"	"MS2"	"51.75031"	"651.1"	"100.000"	"45.3750"	"13008"	"13008"	"12987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"974.8"	""	"916.8"	""	"948.5"	""	"1017.1"	""	"1080.0"	"1230.1"	""	"583"	"35"	"34.000"	"27.000"	"0.0087627124221613"	"26"	"0.0001889"	"0.0008109"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELLEAIK"	"[K].gELLEAIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07895"	"Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus OX=10116 GN=Sod2 PE=1 SV=2"	"P07895"	"Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus OX=10116 GN=Sod2 PE=1 SV=2"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"665.92029"	"1330.83330"	"1330.83462"	"-0.99"	"-0.00066"	"7/62"	"7"	"62"	"12236330.9527588"	"HCD"	"MS2"	"4.031151"	"420.6"	"58.472"	"49.9392"	"14865"	"14865"	"14846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"468.4"	""	"438.1"	""	"493.5"	""	"792.7"	"6.8"	"863.1"	"934.5"	""	"582"	"27"	"34.000"	"27.000"	"0.0559619693112856"	"27"	"0.000523"	"0.002998"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELLEAIK"	"[K].gELLEAIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07895"	"Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus OX=10116 GN=Sod2 PE=1 SV=2"	"P07895"	"Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus OX=10116 GN=Sod2 PE=1 SV=2"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"665.92047"	"1330.83367"	"1330.83462"	"-0.72"	"-0.00048"	"6/62"	"6"	"62"	"16138911.6031494"	"HCD"	"MS2"	"6.213534"	"407.9"	"39.310"	"49.6687"	"14708"	"14708"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"454.3"	""	"422.7"	""	"511.5"	""	"702.5"	"3.1"	"858.7"	"924.5"	""	"582"	"40"	"34.000"	"27.000"	"0.00310379471278005"	""	"0.0002277"	"0.001232"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVGVDEK"	"[K].lLVGVDEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"665.92065"	"1330.83403"	"1330.83462"	"-0.44"	"-0.00030"	"7/58"	"7"	"58"	"11303482.932312"	"HCD"	"MS2"	"55.94874"	"823.5"	"100.000"	"45.1660"	"12874"	"12874"	"12848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1216.0"	""	"1155.1"	""	"1227.1"	""	"1248.6"	""	"1377.6"	"1574.7"	""	"582"	"44"	"34.000"	"27.000"	"0.00108866181187167"	""	"0.0002277"	"0.001252"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LQLELEK"	"[K].lQLELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6QLM7"	"Kinesin heavy chain isoform 5A OS=Rattus norvegicus OX=10116 GN=Kif5a PE=1 SV=1"	"Q6QLM7"	"Kinesin heavy chain isoform 5A OS=Rattus norvegicus OX=10116 GN=Kif5a PE=1 SV=1"	"0"	"2"	"2"	"0.0435"	"0.0000"	"1"	"1"	"3"	"665.92126"	"1330.83525"	"1330.83462"	"0.47"	"0.00031"	"10/62"	"10"	"62"	"2207952.83984375"	"HCD"	"MS2"	"7.95104"	"177.7"	"100.000"	"55.3759"	"17015"	"17015"	"16987"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.1"	""	"249.4"	""	"276.6"	""	"233.4"	""	"312.8"	"360.1"	""	"584"	"23"	"34.000"	"27.000"	"0.135326500562996"	""	"0.002683"	"0.03993"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LQLELEK"	"[K].lQLELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6QLM7"	"Kinesin heavy chain isoform 5A OS=Rattus norvegicus OX=10116 GN=Kif5a PE=1 SV=1"	"Q6QLM7"	"Kinesin heavy chain isoform 5A OS=Rattus norvegicus OX=10116 GN=Kif5a PE=1 SV=1"	"0"	"2"	"2"	"0.0435"	"0.0000"	"1"	"1"	"3"	"665.92145"	"1330.83562"	"1330.83462"	"0.75"	"0.00050"	"10/62"	"10"	"62"	"2343762.80023193"	"HCD"	"MS2"	"7.357747"	"180.0"	"100.000"	"55.5840"	"17154"	"17154"	"17125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.3"	""	"262.2"	""	"283.2"	""	"239.9"	""	"289.7"	"368.9"	""	"602"	"23"	"34.000"	"27.000"	"0.136951406105164"	""	"0.001966"	"0.02862"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIQAVQK"	"[K].sVIQAVQk.[ST]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"665.92542"	"1330.84355"	"1330.84586"	"-1.73"	"-0.00115"	"14/64"	"14"	"64"	"11515176.2075195"	"HCD"	"MS2"	"0"	"715.0"	"100.000"	"36.0495"	"9156"	"9156"	"9130"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"951.5"	""	"883.3"	""	"918.7"	""	"1194.0"	"3.5"	"1390.8"	"1441.1"	""	"504"	"51"	"34.000"	"27.000"	"0.000191161548907354"	""	"0.0001889"	"0.0007416"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLQAVQK"	"[K].sVLQAVQk.[ST]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q64548"	"Reticulon-1 OS=Rattus norvegicus OX=10116 GN=Rtn1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"665.92542"	"1330.84355"	"1330.84586"	"-1.73"	"-0.00115"	"14/64"	"14"	"64"	"11515176.2075195"	"HCD"	"MS2"	"0"	"715.0"	"100.000"	"36.0495"	"9156"	"9156"	"9130"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"951.5"	""	"883.3"	""	"918.7"	""	"1194.0"	"3.5"	"1390.8"	"1441.1"	""	"504"	"51"	"34.000"	"27.000"	"0.000191161548907354"	""	"0.0001889"	"0.0007416"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIQAVQK"	"[K].sVIQAVQk.[ST]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"665.92590"	"1330.84453"	"1330.84586"	"-1.00"	"-0.00066"	"7/64"	"7"	"64"	"1995638.88360596"	"HCD"	"MS2"	"0"	"172.3"	"100.000"	"36.4594"	"9368"	"9368"	"9337"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.3"	""	"229.7"	""	"230.6"	""	"272.4"	""	"310.5"	"338.9"	""	"546"	"30"	"34.000"	"27.000"	"0.029118074109586"	""	"0.0001889"	"0.0004909"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLQAVQK"	"[K].sVLQAVQk.[ST]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q64548"	"Reticulon-1 OS=Rattus norvegicus OX=10116 GN=Rtn1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"665.92590"	"1330.84453"	"1330.84586"	"-1.00"	"-0.00066"	"7/64"	"7"	"64"	"1995638.88360596"	"HCD"	"MS2"	"0"	"172.3"	"100.000"	"36.4594"	"9368"	"9368"	"9337"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.3"	""	"229.7"	""	"230.6"	""	"272.4"	""	"310.5"	"338.9"	""	"546"	"30"	"34.000"	"27.000"	"0.029118074109586"	""	"0.0001889"	"0.0004909"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIQAVQK"	"[K].sVIQAVQk.[ST]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"665.92664"	"1330.84599"	"1330.84586"	"0.10"	"0.00007"	"14/64"	"14"	"64"	"12455767.6716919"	"HCD"	"MS2"	"0"	"737.2"	"100.000"	"36.1294"	"9232"	"9232"	"9209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1017.8"	""	"907.8"	""	"953.9"	""	"1236.0"	""	"1383.6"	"1493.7"	""	"534"	"51"	"34.000"	"27.000"	"0.000198386109818419"	""	"0.0001889"	"0.0006407"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLQAVQK"	"[K].sVLQAVQk.[ST]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q64548"	"Reticulon-1 OS=Rattus norvegicus OX=10116 GN=Rtn1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"665.92664"	"1330.84599"	"1330.84586"	"0.10"	"0.00007"	"14/64"	"14"	"64"	"12455767.6716919"	"HCD"	"MS2"	"0"	"737.2"	"100.000"	"36.1294"	"9232"	"9232"	"9209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1017.8"	""	"907.8"	""	"953.9"	""	"1236.0"	""	"1383.6"	"1493.7"	""	"534"	"51"	"34.000"	"27.000"	"0.000198386109818419"	""	"0.0001889"	"0.0006407"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WSPLENK"	"[K].wSPLENk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"666.38983"	"1331.77239"	"1331.77236"	"0.02"	"0.00001"	"5/56"	"5"	"56"	"6746493.13421631"	"HCD"	"MS2"	"23.85544"	"505.3"	"100.000"	"42.2672"	"11700"	"11700"	"11676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"674.5"	""	"614.9"	""	"664.2"	""	"842.8"	""	"967.1"	"1035.3"	""	"904"	"28"	"36.000"	"29.000"	"0.068570676609162"	"24"	"0.0008731"	"0.009071"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVALMSAIR"	"[K].eLVALMSAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"666.39850"	"1331.78972"	"1331.79182"	"-1.58"	"-0.00105"	"9/84"	"9"	"84"	"5631394.58459473"	"HCD"	"MS2"	"0"	"263.1"	"100.000"	"69.5943"	"22861"	"22861"	"22842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"408.2"	""	"416.7"	""	"430.0"	""	"405.9"	""	"394.5"	"432.4"	""	"852"	"49"	"36.000"	"29.000"	"0.000493639153722084"	"28"	"0"	"9.717E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVALMSAIR"	"[K].eLVALMSAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"666.39856"	"1331.78984"	"1331.79182"	"-1.49"	"-0.00099"	"8/84"	"8"	"84"	"4107722.22265625"	"HCD"	"MS2"	"5.721203"	"185.8"	"100.000"	"69.9014"	"22987"	"22987"	"22970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"285.0"	""	"295.8"	""	"282.6"	""	"286.3"	""	"290.7"	"316.6"	""	"852"	"48"	"36.000"	"29.000"	"0.000628650983175531"	"26"	"0"	"0.0001384"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVALMSAIR"	"[K].eLVALMSAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"666.39880"	"1331.79033"	"1331.79182"	"-1.12"	"-0.00075"	"16/84"	"16"	"84"	"6400468.64135742"	"HCD"	"MS2"	"10.60571"	"288.2"	"100.000"	"69.7202"	"22861"	"22861"	"22842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"469.3"	""	"479.3"	""	"461.3"	""	"439.1"	""	"422.1"	"450.5"	""	"822"	"57"	"36.000"	"29.000"	"8.33377597723247E-05"	""	"0"	"0.0001067"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVALMSAIR"	"[K].eLVALMSAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"666.39929"	"1331.79131"	"1331.79182"	"-0.39"	"-0.00026"	"7/84"	"7"	"84"	"3482501.67547607"	"HCD"	"MS2"	"1.965025"	"160.5"	"100.000"	"70.0116"	"22980"	"22980"	"22966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.2"	""	"259.9"	""	"252.3"	""	"237.9"	"0.0"	"239.3"	"278.2"	""	"814"	"50"	"36.000"	"29.000"	"0.000416480247858267"	""	"0"	"0.000114"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IIEVSGQK"	"[R].iIEVSGQk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"666.41711"	"1331.82695"	"1331.82987"	"-2.19"	"-0.00146"	"6/62"	"6"	"62"	"5617406.73522949"	"HCD"	"MS2"	"20.93404"	"393.7"	"100.000"	"37.9468"	"9978"	"9978"	"9953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"484.4"	""	"514.9"	""	"501.1"	""	"754.5"	""	"725.3"	"752.8"	""	"675"	"2"	"35.000"	"28.000"	"20.2429488236234"	"13"	"0.001454"	"0.01986"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAGSIIGK"	"[K].dLAGSIIGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"444.61453"	"1331.82904"	"1331.82987"	"-0.62"	"-0.00028"	"9/72"	"9"	"72"	"7357170.09796143"	"HCD"	"MS2"	"4.512826"	"296.7"	"100.000"	"46.8613"	"13563"	"13563"	"13544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"411.6"	""	"354.9"	""	"355.6"	""	"592.2"	""	"556.5"	"544.1"	""	"674"	"36"	"35.000"	"28.000"	"0.0093245933450368"	"26"	"0.0001889"	"0.0007953"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIINSLK"	"[K].aDIINSLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"1"	"666.41846"	"1331.82964"	"1331.82987"	"-0.18"	"-0.00012"	"7/70"	"7"	"70"	"2882448.14923096"	"HCD"	"MS2"	"56.45491"	"234.1"	"100.000"	"49.3306"	"14574"	"14574"	"14543"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.9"	""	"308.2"	""	"319.2"	""	"423.3"	""	"419.1"	"440.9"	""	"674"	"28"	"35.000"	"28.000"	"0.0557994477689231"	""	"0.0001889"	"0.0009919"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIINSLK"	"[K].aDIINSLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"666.41846"	"1331.82964"	"1331.82987"	"-0.18"	"-0.00012"	"7/70"	"7"	"70"	"3193722.35418701"	"HCD"	"MS2"	"59.50298"	"253.5"	"100.000"	"49.5990"	"14727"	"14727"	"14702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"358.4"	""	"322.8"	""	"314.3"	""	"449.0"	""	"484.0"	"476.3"	""	"674"	"23"	"35.000"	"28.000"	"0.159451974270019"	""	"0.0001889"	"0.0009524"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAGSIIGK"	"[K].dLAGSIIGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"444.61481"	"1331.82987"	"1331.82987"	"0.00"	"0.00000"	"9/72"	"9"	"72"	"9214847.43981934"	"HCD"	"MS2"	"3.747046"	"382.7"	"100.000"	"47.0930"	"13706"	"13706"	"13682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"512.9"	"7.5"	"494.2"	""	"462.4"	""	"784.9"	""	"704.1"	"663.1"	""	"667"	"32"	"35.000"	"28.000"	"0.0217318069419291"	"24"	"0.0001889"	"0.000382"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAGSIIGK"	"[K].dLAGSIIGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"666.41888"	"1331.83049"	"1331.82987"	"0.47"	"0.00031"	"14/72"	"14"	"72"	"15212217.9341431"	"HCD"	"MS2"	"6.240217"	"1000.0"	"100.000"	"46.7372"	"13513"	"13513"	"13496"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1433.0"	""	"1243.8"	""	"1202.8"	""	"2066.9"	"1.3"	"1790.5"	"1733.1"	""	"663"	"49"	"35.000"	"28.000"	"0.000460769297247227"	"26"	"0.0001859"	"0.0003582"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAGSIIGK"	"[K].dLAGSIIGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"666.41895"	"1331.83061"	"1331.82987"	"0.56"	"0.00037"	"8/72"	"8"	"72"	"17104626.1307983"	"HCD"	"MS2"	"6.833"	"885.5"	"83.376"	"47.0060"	"13670"	"13670"	"13650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1284.4"	""	"1109.2"	""	"1051.2"	""	"1824.2"	""	"1576.7"	"1543.9"	""	"663"	"48"	"35.000"	"28.000"	"0.000555243563402764"	"27"	"0.0001308"	"0.0002689"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLTGTK"	"[K].iIQLTGTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"666.43561"	"1331.86394"	"1331.86626"	"-1.74"	"-0.00116"	"7/70"	"7"	"70"	"2050853.52416992"	"HCD"	"MS2"	"0"	"173.1"	"100.000"	"43.5891"	"12231"	"12231"	"12212"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.7"	""	"233.4"	""	"261.1"	""	"286.8"	""	"335.0"	"314.1"	""	"433"	"34"	"33.000"	"26.000"	"0.00869877105487955"	"24"	"0.0001889"	"0.00062"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLTGTK"	"[K].iIQLTGTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"666.43561"	"1331.86394"	"1331.86626"	"-1.74"	"-0.00116"	"6/70"	"6"	"70"	"2040069.36322021"	"HCD"	"MS2"	"29.76957"	"174.9"	"100.000"	"43.8597"	"12390"	"12390"	"12375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"240.6"	""	"238.1"	""	"267.7"	""	"260.0"	""	"340.5"	"322.1"	""	"433"	"34"	"33.000"	"26.000"	"0.00773495694598926"	""	"0.0001889"	"0.0005542"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFIPYPLPR"	"[R].tFIPYPLPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BK63"	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufa9 PE=1 SV=2"	"Q5BK63"	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufa9 PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"666.89703"	"1332.78679"	"1332.78772"	"-0.70"	"-0.00047"	"6/64"	"6"	"64"	"2805794.23968506"	"HCD"	"MS2"	"17.73507"	"151.7"	"100.000"	"57.2000"	"17760"	"17760"	"17739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.5"	""	"208.6"	""	"211.2"	""	"232.3"	"6.4"	"292.1"	"292.4"	""	"828"	"37"	"36.000"	"29.000"	"0.00889201816290041"	"19"	"0.0001889"	"0.000782"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFIPYPLPR"	"[R].tFIPYPLPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BK63"	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufa9 PE=1 SV=2"	"Q5BK63"	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufa9 PE=1 SV=2"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"666.89709"	"1332.78691"	"1332.78772"	"-0.61"	"-0.00041"	"5/64"	"5"	"64"	"3202847.92645264"	"HCD"	"MS2"	"15.0517"	"166.5"	"100.000"	"57.4174"	"17903"	"17903"	"17877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.6"	""	"229.4"	""	"227.7"	""	"274.9"	"5.7"	"318.2"	"327.0"	""	"831"	"33"	"36.000"	"29.000"	"0.0196594348098495"	"19"	"0.0001889"	"0.0007492"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEELATK"	"[K].aLEELATk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"666.90753"	"1332.80779"	"1332.81389"	"-4.58"	"-0.00305"	"6/64"	"6"	"64"	"4496689.07159424"	"HCD"	"MS2"	"49.47338"	"330.5"	"100.000"	"42.1114"	"11683"	"11683"	"11663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"422.8"	""	"439.0"	""	"483.9"	""	"578.3"	"2.8"	"571.4"	"632.8"	""	"854"	"27"	"36.000"	"29.000"	"0.0838354838208992"	"23"	"0.0003839"	"0.001659"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEELATK"	"[K].aLEELATk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"666.90979"	"1332.81230"	"1332.81389"	"-1.19"	"-0.00079"	"7/64"	"7"	"64"	"4370967.97357178"	"HCD"	"MS2"	"25.64752"	"316.9"	"100.000"	"41.8751"	"11542"	"11542"	"11518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"407.7"	""	"408.4"	""	"446.9"	""	"551.7"	""	"569.3"	"624.0"	""	"866"	"20"	"36.000"	"29.000"	"0.473683106595817"	"20"	"0.0002723"	"0.001392"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPEILQK"	"[R].fPEILQk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"666.91724"	"1332.82720"	"1332.82914"	"-1.46"	"-0.00097"	"10/50"	"10"	"50"	"6303459.27020264"	"HCD"	"MS2"	"4.418207"	"411.6"	"100.000"	"55.2874"	"17032"	"17032"	"17013"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"603.9"	""	"532.4"	""	"615.3"	""	"622.0"	"1.0"	"769.0"	"755.5"	""	"636"	"28"	"35.000"	"28.000"	"0.0565492852392378"	"27"	"0.0006396"	"0.006195"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPEILQK"	"[R].fPEILQk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"666.91821"	"1332.82915"	"1332.82914"	"0.00"	"0.00000"	"10/50"	"10"	"50"	"6288845.58905029"	"HCD"	"MS2"	"9.74837"	"413.3"	"100.000"	"55.0426"	"16878"	"16878"	"16859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"646.0"	""	"552.0"	""	"592.3"	""	"597.4"	"0.9"	"744.0"	"781.0"	""	"639"	"28"	"35.000"	"28.000"	"0.0568160271507436"	"25"	"0.0006037"	"0.00541"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMGLEALK"	"[R].lMGLEALk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.5581"	"0.0000"	"1"	"1"	"1"	"666.91931"	"1332.83135"	"1332.83252"	"-0.88"	"-0.00058"	"7/56"	"7"	"56"	"5192062.93737793"	"HCD"	"MS2"	"38.9749"	"370.6"	"100.000"	"58.5543"	"18368"	"18368"	"18341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"569.4"	""	"529.1"	""	"504.2"	""	"447.2"	""	"726.3"	"738.2"	""	"608"	"43"	"34.000"	"27.000"	"0.00139596195902408"	""	"0.0001889"	"0.0004734"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMGLEALK"	"[R].lMGLEALk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.5250"	"0.0000"	"1"	"1"	"1"	"666.91956"	"1332.83183"	"1332.83252"	"-0.51"	"-0.00034"	"7/56"	"7"	"56"	"5933588.91699219"	"HCD"	"MS2"	"20.08352"	"444.2"	"100.000"	"58.4105"	"18255"	"18255"	"18234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"715.8"	""	"610.9"	""	"583.5"	""	"542.0"	"1.1"	"866.8"	"891.0"	""	"572"	"40"	"34.000"	"27.000"	"0.00258443749484578"	""	"0.0001889"	"0.0006233"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVISSANR"	"[K].kVISSANR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"1"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"666.92114"	"1332.83501"	"1332.83635"	"-1.01"	"-0.00067"	"7/72"	"7"	"72"	"1115397.89416504"	"HCD"	"MS2"	"0"	"52.4"	"100.000"	"23.9879"	"4286"	"4286"	"4263"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.3"	""	"73.5"	""	"72.3"	""	"87.1"	"0.5"	"91.0"	"87.0"	""	"602"	"23"	"34.000"	"27.000"	"0.167327181438391"	"21"	"0.001158"	"0.0154"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVISSANR"	"[K].kVISSANR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"1"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"666.92139"	"1332.83550"	"1332.83635"	"-0.64"	"-0.00043"	"9/72"	"9"	"72"	"1422885.80603027"	"HCD"	"MS2"	"22.30043"	"62.0"	"100.000"	"24.0192"	"4333"	"4333"	"4302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.4"	""	"80.3"	""	"93.3"	""	"102.1"	"0.8"	"105.7"	"103.5"	""	"584"	"23"	"34.000"	"27.000"	"0.14736109888855"	"23"	"0.0003571"	"0.001523"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVSDLLK"	"[K].iSVSDLLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"666.92834"	"1332.84941"	"1332.85027"	"-0.65"	"-0.00043"	"7/62"	"7"	"62"	"9303031.26037598"	"HCD"	"MS2"	"1.416916"	"614.9"	"100.000"	"59.9197"	"18920"	"18920"	"18900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"585.8"	""	"675.3"	""	"641.1"	""	"1087.7"	"3.6"	"1415.4"	"1445.9"	""	"435"	"47"	"33.000"	"26.000"	"0.000388561047530321"	""	"0.0001889"	"0.000693"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVSDLLK"	"[K].iSVSDLLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"666.92975"	"1332.85222"	"1332.85027"	"1.46"	"0.00097"	"12/62"	"12"	"62"	"7515654.95678711"	"HCD"	"MS2"	"4.129497"	"525.3"	"100.000"	"59.7838"	"18811"	"18811"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"520.9"	""	"607.2"	""	"546.4"	""	"900.1"	""	"1177.9"	"1256.3"	""	"317"	"39"	"32.000"	"25.000"	"0.00196349258965064"	""	"0.0001889"	"0.0009501"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVSDLLK"	"[K].iSVSDLLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"666.93018"	"1332.85307"	"1332.85027"	"2.10"	"0.00140"	"7/62"	"7"	"62"	"11972392.8363647"	"HCD"	"MS2"	"23.01959"	"856.9"	"100.000"	"59.4849"	"18689"	"18689"	"18665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"824.8"	""	"975.2"	""	"873.3"	""	"1608.6"	""	"1946.6"	"1929.0"	""	"316"	"45"	"31.000"	"24.000"	"0.000451499305853242"	""	"0.0002277"	"0.001208"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVSDLLK"	"[K].iSVSDLLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"666.93079"	"1332.85430"	"1332.85027"	"3.02"	"0.00201"	"7/62"	"7"	"62"	"8458562.71832275"	"HCD"	"MS2"	"44.42016"	"557.7"	"100.000"	"59.6116"	"18794"	"18794"	"18773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"542.7"	""	"648.6"	""	"583.1"	""	"1055.1"	""	"1231.6"	"1254.1"	""	"322"	"47"	"32.000"	"25.000"	"0.000297047482487895"	""	"0.0001889"	"0.001004"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITAVVMK"	"[R].lITAVVMk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"666.93726"	"1332.86724"	"1332.86890"	"-1.25"	"-0.00083"	"14/56"	"14"	"56"	"3571147.421875"	"HCD"	"MS2"	"16.30075"	"242.6"	"100.000"	"54.9386"	"16889"	"16889"	"16869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"348.0"	""	"400.3"	""	"429.0"	""	"265.9"	""	"397.6"	"455.7"	""	"229"	"49"	"30.000"	"23.000"	"0.000154812308485745"	""	"0.0001889"	"0.0004018"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITAVVMK"	"[R].lITAVVMk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"666.93762"	"1332.86797"	"1332.86890"	"-0.70"	"-0.00047"	"14/56"	"14"	"56"	"2992134.74780273"	"HCD"	"MS2"	"25.48261"	"214.5"	"100.000"	"54.6750"	"16728"	"16728"	"16704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.6"	""	"325.5"	""	"357.0"	""	"226.6"	""	"379.4"	"408.9"	""	"223"	"51"	"30.000"	"23.000"	"9.6000803368583E-05"	""	"0.0001889"	"0.0004168"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLMGK"	"[K].tLVLLMGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"666.93781"	"1332.86833"	"1332.86890"	"-0.43"	"-0.00028"	"14/56"	"14"	"56"	"6153924.74237061"	"HCD"	"MS2"	"0"	"399.7"	"100.000"	"62.0791"	"19749"	"19749"	"19721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"519.3"	""	"624.4"	""	"734.0"	""	"569.3"	""	"657.4"	"679.8"	""	"223"	"52"	"30.000"	"23.000"	"7.76738563233507E-05"	"20"	"0.0001889"	"0.0007974"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLMGK"	"[K].tLVLLMGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"666.93787"	"1332.86846"	"1332.86890"	"-0.33"	"-0.00022"	"7/56"	"7"	"56"	"3865144.29174805"	"HCD"	"MS2"	"7.77901"	"260.7"	"100.000"	"62.5013"	"19974"	"19974"	"19955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"323.7"	""	"382.9"	""	"442.0"	""	"346.4"	""	"468.9"	"509.8"	""	"223"	"48"	"30.000"	"23.000"	"0.000168373937189302"	"18"	"0.0001889"	"0.0004112"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLMGK"	"[K].tLVLLMGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"666.93793"	"1332.86858"	"1332.86890"	"-0.24"	"-0.00016"	"14/56"	"14"	"56"	"5525418.14923096"	"HCD"	"MS2"	"33.37255"	"346.8"	"100.000"	"62.2016"	"19852"	"19852"	"19827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"454.2"	""	"550.3"	""	"633.2"	""	"479.0"	"2.6"	"577.3"	"583.9"	""	"223"	"52"	"30.000"	"23.000"	"7.73169773708473E-05"	"21"	"0.0001889"	"0.0007817"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLMGK"	"[K].tLVLLMGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"666.93842"	"1332.86955"	"1332.86890"	"0.49"	"0.00033"	"14/56"	"14"	"56"	"3718480.15771484"	"HCD"	"MS2"	"6.505163"	"247.5"	"100.000"	"62.3692"	"19867"	"19867"	"19849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"300.8"	"2.6"	"342.5"	""	"454.4"	""	"327.6"	"1.1"	"442.5"	"473.0"	""	"222"	"51"	"30.000"	"23.000"	"8.07835583035874E-05"	"20"	"0.0001889"	"0.0004466"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLVEFGVR"	"[K].lDGLVEFGVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"667.37476"	"1333.74224"	"1333.76772"	"-19.11"	"-0.01274"	"7/80"	"7"	"80"	"3792412.59124756"	"HCD"	"MS2"	"17.64161"	"214.6"	"100.000"	"62.9258"	"20148"	"20148"	"20131"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.3"	""	"298.0"	""	"285.8"	""	"344.9"	"0.5"	"388.9"	"420.4"	""	"891"	"23"	"36.000"	"29.000"	"0.209820398909843"	""	"0.0006737"	"0.006629"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFPWSEIR"	"[K].iGFPWSEIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"667.37610"	"1333.74492"	"1333.74659"	"-1.25"	"-0.00083"	"7/66"	"7"	"66"	"1043026.40740967"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"65.9133"	"21315"	"21315"	"21289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.2"	""	"73.7"	""	"70.4"	""	"118.9"	"1.5"	"151.7"	"114.3"	""	"833"	"12"	"36.000"	"29.000"	"2.92829621231617"	"21"	"0.0004166"	"0.002409"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLVEFGVR"	"[K].lDGLVEFGVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"667.37622"	"1333.74516"	"1333.76772"	"-16.91"	"-0.01128"	"9/80"	"9"	"80"	"3416584.83197021"	"HCD"	"MS2"	"10.75517"	"193.2"	"100.000"	"62.8445"	"20061"	"20061"	"20041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.4"	""	"240.8"	""	"257.4"	""	"324.0"	"2.6"	"359.2"	"382.8"	""	"835"	"24"	"36.000"	"29.000"	"0.184355661770008"	""	"0.0004166"	"0.002385"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEPWTFLVR"	"[K].gEPWTFLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"667.37628"	"1333.74529"	"1333.74659"	"-0.98"	"-0.00065"	"7/70"	"7"	"70"	"3183912.11993408"	"HCD"	"MS2"	"38.42695"	"184.3"	"100.000"	"62.6238"	"20024"	"20024"	"20003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"280.4"	""	"267.4"	""	"293.2"	""	"273.9"	""	"308.6"	"323.4"	""	"831"	"26"	"36.000"	"29.000"	"0.103412021574633"	"17"	"0.0001889"	"0.0004666"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFPWSEIR"	"[K].iGFPWSEIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"667.37634"	"1333.74541"	"1333.74659"	"-0.88"	"-0.00059"	"8/66"	"8"	"66"	"3491836.98834229"	"HCD"	"MS2"	"5.938297"	"169.0"	"100.000"	"65.0399"	"20958"	"20958"	"20937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.5"	""	"219.9"	""	"237.3"	""	"270.8"	"2.0"	"307.4"	"341.3"	""	"831"	"30"	"36.000"	"29.000"	"0.0453493459794459"	""	"0.0001889"	"0.0004163"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFPWSEIR"	"[K].iGFPWSEIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1333"	"0.0000"	"1"	"1"	"1"	"667.37646"	"1333.74565"	"1333.74659"	"-0.70"	"-0.00047"	"8/66"	"8"	"66"	"3967817.65588379"	"HCD"	"MS2"	"7.918207"	"191.9"	"100.000"	"65.0409"	"21012"	"21012"	"20995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"240.5"	""	"248.0"	""	"257.0"	""	"332.0"	""	"356.1"	"388.5"	""	"831"	"30"	"36.000"	"29.000"	"0.0448302363086494"	""	"0.0001859"	"0.0003344"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFPWSEIR"	"[K].iGFPWSEIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"667.37701"	"1333.74675"	"1333.74659"	"0.12"	"0.00008"	"14/66"	"14"	"66"	"71268666.1022949"	"HCD"	"MS2"	"22.76682"	"515.7"	"18.409"	"64.4141"	"20756"	"20756"	"20739"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"669.1"	""	"662.7"	""	"661.6"	""	"899.1"	""	"936.1"	"1063.6"	""	"902"	"34"	"36.000"	"29.000"	"0.0174653197859649"	""	"0.0003839"	"0.002037"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEPWTFLVR"	"[K].gEPWTFLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"667.37714"	"1333.74700"	"1333.74659"	"0.31"	"0.00020"	"7/70"	"7"	"70"	"3374077.29327393"	"HCD"	"MS2"	"19.96325"	"187.4"	"100.000"	"62.5310"	"19933"	"19933"	"19913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.9"	""	"284.0"	""	"280.7"	""	"288.6"	"2.5"	"302.0"	"338.6"	""	"902"	"40"	"36.000"	"29.000"	"0.0048325520666216"	"19"	"0.0001308"	"0.0003114"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFPWSEIR"	"[K].iGFPWSEIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"667.37775"	"1333.74822"	"1333.74659"	"1.22"	"0.00081"	"8/66"	"8"	"66"	"73226962.6645508"	"HCD"	"MS2"	"0.2901779"	"295.1"	"9.770"	"64.7276"	"20884"	"20884"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"396.4"	""	"362.0"	""	"380.5"	""	"494.9"	""	"541.2"	"629.5"	""	"896"	"36"	"36.000"	"29.000"	"0.0123105658058987"	""	"0.000523"	"0.003273"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFPWSEIR"	"[K].iGFPWSEIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3056"	"0.0000"	"1"	"1"	"1"	"667.37805"	"1333.74883"	"1333.74659"	"1.68"	"0.00112"	"8/66"	"8"	"66"	"69200439.378418"	"HCD"	"MS2"	"0.3786099"	"318.7"	"11.201"	"64.7150"	"20826"	"20826"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"414.2"	""	"391.5"	""	"404.4"	""	"541.7"	""	"581.6"	"694.0"	""	"902"	"36"	"36.000"	"29.000"	"0.0124502061315537"	""	"0.0005564"	"0.003532"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFPWSEIR"	"[K].iGFPWSEIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"667.37860"	"1333.74993"	"1333.74659"	"2.50"	"0.00167"	"14/66"	"14"	"66"	"70870785.4851074"	"HCD"	"MS2"	"17.97385"	"639.0"	"21.658"	"64.4018"	"20698"	"20698"	"20681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"826.0"	""	"832.2"	""	"851.8"	""	"1127.3"	""	"1116.4"	"1304.1"	""	"882"	"31"	"36.000"	"29.000"	"0.0322432335816187"	""	"0.0005564"	"0.003561"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFATFDK"	"[K].fFATFDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51868"	"Calsequestrin-2 OS=Rattus norvegicus OX=10116 GN=Casq2 PE=1 SV=2"	"P51868"	"Calsequestrin-2 OS=Rattus norvegicus OX=10116 GN=Casq2 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"667.38141"	"1333.75554"	"1333.75564"	"-0.08"	"-0.00005"	"10/52"	"10"	"52"	"3425270.74499512"	"HCD"	"MS2"	"22.76391"	"279.2"	"100.000"	"57.8608"	"18030"	"18030"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"509.4"	""	"472.0"	""	"483.3"	""	"279.5"	"6.1"	"341.1"	"542.9"	""	"853"	"21"	"36.000"	"29.000"	"0.32879032955598"	"19"	"0.000523"	"0.002804"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWNLDSK"	"[R].lWNLDSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P58405"	"Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2"	"P58405"	"Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"667.39667"	"1333.78606"	"1333.78801"	"-1.46"	"-0.00097"	"6/58"	"6"	"58"	"2109496.12695313"	"HCD"	"MS2"	"0"	"208.6"	"100.000"	"50.1143"	"14887"	"14887"	"14865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.2"	""	"270.9"	""	"272.5"	""	"349.9"	""	"431.8"	"399.2"	""	"828"	"29"	"36.000"	"29.000"	"0.0515229049273353"	"21"	"0.0004166"	"0.002222"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQWLDVK"	"[R].sQWLDVk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"667.39709"	"1333.78691"	"1333.78801"	"-0.82"	"-0.00055"	"12/66"	"12"	"66"	"2031212.17840576"	"HCD"	"MS2"	"0"	"174.3"	"100.000"	"44.4286"	"12573"	"12573"	"12555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.9"	""	"208.3"	""	"243.8"	""	"268.7"	""	"324.6"	"344.0"	""	"800"	"34"	"36.000"	"29.000"	"0.0176221945402621"	"27"	"0.0002277"	"0.001261"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYVLTALAAR"	"[R].qYVLTALAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQN6"	"Spermatogenesis-defective protein 39 homolog OS=Rattus norvegicus OX=10116 GN=Vipas39 PE=1 SV=1"	"Q5PQN6"	"Spermatogenesis-defective protein 39 homolog OS=Rattus norvegicus OX=10116 GN=Vipas39 PE=1 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"667.90765"	"1334.80803"	"1334.79935"	"6.50"	"0.00434"	"7/90"	"7"	"90"	"2314825.831604"	"HCD"	"MS2"	"10.6283"	"194.2"	"100.000"	"47.3959"	"13782"	"13782"	"13752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"291.1"	""	"261.9"	""	"277.1"	""	"253.6"	"1.2"	"359.9"	"395.7"	""	"607"	"9"	"34.000"	"27.000"	"3.86508185088557"	"20"	"0.004346"	"0.1213"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDSVALK"	"[R].lMDSVALk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q498R7"	"CXXC motif containing zinc binding protein OS=Rattus norvegicus OX=10116 GN=Czib PE=2 SV=1"	"Q498R7"	"CXXC motif containing zinc binding protein OS=Rattus norvegicus OX=10116 GN=Czib PE=2 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"3"	"667.90930"	"1334.81133"	"1334.81178"	"-0.34"	"-0.00023"	"8/58"	"8"	"58"	"2835291.19671631"	"HCD"	"MS2"	"29.8123"	"255.5"	"100.000"	"48.9685"	"14473"	"14473"	"14447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"331.5"	""	"354.6"	""	"338.4"	""	"380.4"	""	"507.2"	"517.1"	""	"607"	"8"	"34.000"	"27.000"	"5.08345162874024"	"20"	"0.000523"	"0.00293"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FLNELIK"	"[R].fLNELIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0A0G2JV04"	"ADP-ribosylation factor-binding protein GGA3 OS=Rattus norvegicus OX=10116 GN=Gga3 PE=1 SV=1"	"A0A0G2JV04"	"ADP-ribosylation factor-binding protein GGA3 OS=Rattus norvegicus OX=10116 GN=Gga3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"667.92548"	"1334.84368"	"1334.84479"	"-0.84"	"-0.00056"	"5/56"	"5"	"56"	"1019581.03344727"	"HCD"	"MS2"	"25.15557"	"83.9"	"100.000"	"62.0150"	"19776"	"19776"	"19747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.3"	""	"121.4"	""	"132.0"	""	"133.6"	"1.1"	"156.0"	"145.3"	""	"267"	"18"	"31.000"	"24.000"	"0.205817010468766"	""	"0.0006037"	"0.0037"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDAK"	"[R].gLFIIDAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"445.61942"	"1334.84369"	"1334.84479"	"-0.83"	"-0.00037"	"6/56"	"6"	"56"	"12344816.5366211"	"HCD"	"MS2"	"11.1754"	"475.3"	"100.000"	"58.7461"	"18442"	"18442"	"18421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"768.7"	""	"731.1"	""	"814.0"	""	"781.6"	""	"712.4"	"681.6"	""	"267"	"38"	"31.000"	"24.000"	"0.00237400301240196"	"20"	"0.0008453"	"0.008367"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDAK"	"[R].gLFIIDAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"445.61945"	"1334.84378"	"1334.84479"	"-0.76"	"-0.00034"	"6/56"	"6"	"56"	"11266224.0935059"	"HCD"	"MS2"	"8.163247"	"455.4"	"100.000"	"58.5988"	"18332"	"18332"	"18313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"777.5"	""	"702.4"	""	"735.9"	""	"740.1"	""	"691.9"	"652.9"	""	"267"	"38"	"31.000"	"24.000"	"0.00215021192296299"	"20"	"0.0009404"	"0.009936"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDAK"	"[R].gLFIIDAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"667.92554"	"1334.84380"	"1334.84479"	"-0.75"	"-0.00050"	"7/56"	"7"	"56"	"4466517.72668457"	"HCD"	"MS2"	"41.11659"	"378.1"	"100.000"	"59.2584"	"18650"	"18650"	"18629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"538.8"	""	"541.4"	""	"557.1"	""	"620.5"	"0.1"	"640.7"	"680.5"	""	"267"	"34"	"31.000"	"24.000"	"0.00557803539473241"	"23"	"0.0002277"	"0.001357"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDAK"	"[R].gLFIIDAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"667.92554"	"1334.84380"	"1334.84479"	"-0.75"	"-0.00050"	"7/56"	"7"	"56"	"25840041.1074829"	"HCD"	"MS2"	"0"	"1822.4"	"91.227"	"58.4793"	"18283"	"18283"	"18266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3148.3"	""	"2775.2"	""	"2968.2"	""	"2993.0"	""	"2689.8"	"2637.2"	""	"267"	"44"	"31.000"	"24.000"	"0.000480265362432916"	"20"	"0.0004166"	"0.002238"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDAK"	"[R].gLFIIDAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"667.92566"	"1334.84404"	"1334.84479"	"-0.56"	"-0.00038"	"7/56"	"7"	"56"	"5039311.18200684"	"HCD"	"MS2"	"47.36448"	"414.2"	"100.000"	"59.0796"	"18524"	"18524"	"18505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"612.0"	""	"574.1"	""	"606.9"	""	"648.6"	""	"711.6"	"770.5"	""	"267"	"33"	"31.000"	"24.000"	"0.00601840300562849"	"23"	"0.0003839"	"0.001604"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDAK"	"[R].gLFIIDAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"667.92566"	"1334.84404"	"1334.84479"	"-0.56"	"-0.00038"	"7/56"	"7"	"56"	"33495028.6185303"	"HCD"	"MS2"	"2.447088"	"1715.4"	"72.551"	"58.6505"	"18407"	"18407"	"18389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3002.6"	""	"2640.2"	""	"2805.6"	""	"2710.8"	""	"2569.6"	"2468.7"	""	"267"	"46"	"31.000"	"24.000"	"0.000303725507008072"	"20"	"0.0003839"	"0.00186"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLNELIK"	"[R].fLNELIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0A0G2JV04"	"ADP-ribosylation factor-binding protein GGA3 OS=Rattus norvegicus OX=10116 GN=Gga3 PE=1 SV=1"	"A0A0G2JV04"	"ADP-ribosylation factor-binding protein GGA3 OS=Rattus norvegicus OX=10116 GN=Gga3 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"667.92578"	"1334.84429"	"1334.84479"	"-0.38"	"-0.00025"	"12/56"	"12"	"56"	"3700862.57952881"	"HCD"	"MS2"	"20.17982"	"288.8"	"100.000"	"61.4757"	"19502"	"19502"	"19481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.3"	""	"372.5"	""	"411.7"	""	"516.6"	""	"523.9"	"524.0"	""	"267"	"32"	"31.000"	"24.000"	"0.00921470138126724"	""	"0.000523"	"0.003165"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFVDLVVK"	"[K].gFVDLVVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"667.92590"	"1334.84453"	"1334.84479"	"-0.20"	"-0.00013"	"7/56"	"7"	"56"	"4832767.75958252"	"HCD"	"MS2"	"3.62325"	"350.5"	"100.000"	"57.7675"	"18046"	"18046"	"18021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.9"	""	"314.0"	""	"351.9"	""	"633.7"	"0.4"	"1003.6"	"757.6"	""	"267"	"46"	"31.000"	"24.000"	"0.000349527431597235"	""	"0.0001889"	"0.0005079"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLQDIK"	"[R].iFLQDIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19132"	"Ferritin heavy chain OS=Rattus norvegicus OX=10116 GN=Fth1 PE=1 SV=3"	"P19132"	"Ferritin heavy chain OS=Rattus norvegicus OX=10116 GN=Fth1 PE=1 SV=3"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"667.92596"	"1334.84465"	"1334.84479"	"-0.11"	"-0.00007"	"12/54"	"12"	"54"	"5983433.67077637"	"HCD"	"MS2"	"33.86055"	"441.8"	"100.000"	"57.4498"	"17916"	"17916"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"496.4"	""	"479.5"	""	"422.7"	""	"1033.1"	""	"892.3"	"872.7"	""	"267"	"35"	"31.000"	"24.000"	"0.00417331595511049"	""	"0.0006037"	"0.006156"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDAK"	"[R].gLFIIDAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"667.92603"	"1334.84477"	"1334.84479"	"-0.02"	"-0.00001"	"7/56"	"7"	"56"	"89927745.9003906"	"HCD"	"MS2"	"0"	"496.4"	"7.731"	"58.9313"	"18518"	"18518"	"18501"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"818.9"	""	"747.5"	""	"828.6"	""	"779.6"	""	"764.7"	"751.5"	""	"265"	"47"	"31.000"	"24.000"	"0.000285901134212728"	"21"	"0.0006037"	"0.005977"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLQDIK"	"[R].iFLQDIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19132"	"Ferritin heavy chain OS=Rattus norvegicus OX=10116 GN=Fth1 PE=1 SV=3"	"P19132"	"Ferritin heavy chain OS=Rattus norvegicus OX=10116 GN=Fth1 PE=1 SV=3"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"667.92609"	"1334.84490"	"1334.84479"	"0.08"	"0.00005"	"12/54"	"12"	"54"	"5479251.95355225"	"HCD"	"MS2"	"35.15636"	"393.9"	"100.000"	"57.2438"	"17778"	"17778"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"440.9"	""	"442.5"	""	"381.2"	""	"904.0"	""	"831.5"	"746.3"	""	"265"	"35"	"31.000"	"24.000"	"0.0041900178997231"	""	"0.000494"	"0.00274"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLNELIK"	"[R].fLNELIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0A0G2JV04"	"ADP-ribosylation factor-binding protein GGA3 OS=Rattus norvegicus OX=10116 GN=Gga3 PE=1 SV=1"	"A0A0G2JV04"	"ADP-ribosylation factor-binding protein GGA3 OS=Rattus norvegicus OX=10116 GN=Gga3 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"667.92615"	"1334.84502"	"1334.84479"	"0.17"	"0.00011"	"6/56"	"6"	"56"	"1499261.36029053"	"HCD"	"MS2"	"14.16455"	"120.8"	"100.000"	"61.7939"	"19632"	"19632"	"19609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.7"	""	"146.2"	""	"158.8"	""	"201.2"	""	"228.1"	"236.5"	""	"265"	"30"	"31.000"	"24.000"	"0.012800174146615"	""	"0.0003839"	"0.001697"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFVDLVVK"	"[K].gFVDLVVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"667.92633"	"1334.84538"	"1334.84479"	"0.44"	"0.00030"	"7/56"	"7"	"56"	"4115745.3269043"	"HCD"	"MS2"	"2.603644"	"302.0"	"100.000"	"57.5527"	"17904"	"17904"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.4"	"3.0"	"267.0"	""	"285.4"	""	"600.1"	""	"833.6"	"646.7"	""	"265"	"44"	"31.000"	"24.000"	"0.000591855759600026"	"24"	"0.0001889"	"0.0006318"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLNELIK"	"[R].fLNELIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0A0G2JV04"	"ADP-ribosylation factor-binding protein GGA3 OS=Rattus norvegicus OX=10116 GN=Gga3 PE=1 SV=1"	"A0A0G2JV04"	"ADP-ribosylation factor-binding protein GGA3 OS=Rattus norvegicus OX=10116 GN=Gga3 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"667.92645"	"1334.84563"	"1334.84479"	"0.63"	"0.00042"	"12/56"	"12"	"56"	"5390887.46252441"	"HCD"	"MS2"	"9.55145"	"389.7"	"100.000"	"61.6781"	"19638"	"19638"	"19619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"530.3"	""	"489.5"	""	"549.5"	""	"706.9"	""	"682.2"	"732.9"	""	"265"	"35"	"31.000"	"24.000"	"0.00441789996911286"	""	"0.0006037"	"0.005051"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDAK"	"[R].gLFIIDAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"667.92706"	"1334.84685"	"1334.84479"	"1.54"	"0.00103"	"7/56"	"7"	"56"	"72587167.8100586"	"HCD"	"MS2"	"0"	"583.7"	"11.372"	"58.7876"	"18410"	"18410"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"956.4"	""	"839.9"	""	"967.8"	""	"906.3"	""	"924.0"	"923.8"	""	"252"	"47"	"31.000"	"24.000"	"0.000273130717207282"	"21"	"0.0008125"	"0.007843"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].sEIDLFNIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"668.37714"	"1335.74700"	"1335.74698"	"0.01"	"0.00001"	"7/74"	"7"	"74"	"8640368.08612061"	"HCD"	"MS2"	"28.61573"	"469.0"	"100.000"	"58.1037"	"18183"	"18183"	"18165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"719.0"	""	"679.0"	""	"658.2"	""	"805.8"	""	"748.5"	"837.2"	""	"929"	"49"	"36.000"	"29.000"	"0.00057014552287308"	""	"7.476E-05"	"0.0002042"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].sEIDLFNIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"668.37744"	"1335.74761"	"1335.74698"	"0.47"	"0.00031"	"7/74"	"7"	"74"	"8347500.07177734"	"HCD"	"MS2"	"35.29822"	"467.7"	"100.000"	"57.9325"	"18060"	"18060"	"18043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"706.2"	""	"659.8"	""	"633.4"	""	"788.2"	""	"759.3"	"886.2"	""	"934"	"41"	"36.000"	"29.000"	"0.00407677629037248"	""	"0.0001308"	"0.0003029"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQWLSEK"	"[R].sQWLSEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"668.38733"	"1335.76738"	"1335.76727"	"0.08"	"0.00005"	"12/68"	"12"	"68"	"19069000.7322998"	"HCD"	"MS2"	"7.012507"	"1413.6"	"97.062"	"38.6708"	"10275"	"10275"	"10257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2253.9"	""	"1905.0"	""	"2042.7"	""	"1969.1"	"8.4"	"2523.6"	"2682.5"	""	"852"	"33"	"36.000"	"29.000"	"0.0225636627097846"	""	"0.0006396"	"0.006326"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQWLSEK"	"[R].sQWLSEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"668.38739"	"1335.76750"	"1335.76727"	"0.17"	"0.00012"	"12/68"	"12"	"68"	"17829663.7210083"	"HCD"	"MS2"	"16.58977"	"1007.3"	"74.838"	"38.5596"	"10186"	"10186"	"10167"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1624.6"	""	"1371.0"	""	"1475.0"	""	"1410.8"	"5.6"	"1754.0"	"1894.5"	""	"842"	"34"	"36.000"	"29.000"	"0.0150411864861962"	""	"0.00103"	"0.01147"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSAPFGK"	"[K].aTVSAPFGk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"668.40460"	"1335.80193"	"1335.80366"	"-1.30"	"-0.00087"	"8/68"	"8"	"68"	"4746698.52313232"	"HCD"	"MS2"	"0"	"355.1"	"100.000"	"38.3855"	"10115"	"10115"	"10087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"560.9"	""	"570.3"	""	"565.7"	""	"429.9"	"3.9"	"566.0"	"661.3"	""	"603"	"62"	"34.000"	"27.000"	"1.72300808956568E-05"	"20"	"0"	"0.0001675"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSAPFGK"	"[K].aTVSAPFGk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9385"	"0.0000"	"1"	"1"	"1"	"668.40594"	"1335.80461"	"1335.80366"	"0.72"	"0.00048"	"8/68"	"8"	"68"	"4789514.92962646"	"HCD"	"MS2"	"0"	"352.1"	"100.000"	"38.5059"	"10208"	"10208"	"10177"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"541.2"	""	"551.5"	""	"567.0"	""	"428.5"	"0.1"	"576.4"	"665.9"	""	"615"	"65"	"34.000"	"27.000"	"1.01354986494569E-05"	"20"	"0"	"0.0001779"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIFTGGVGK"	"[R].vIFTGGVGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AXM5"	"Choline/ethanolaminephosphotransferase 1 OS=Rattus norvegicus OX=10116 GN=Cept1 PE=2 SV=1"	"Q6AXM5"	"Choline/ethanolaminephosphotransferase 1 OS=Rattus norvegicus OX=10116 GN=Cept1 PE=2 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"668.42316"	"1335.83904"	"1335.84004"	"-0.75"	"-0.00050"	"8/64"	"8"	"64"	"1579328.38995361"	"HCD"	"MS2"	"37.45781"	"156.2"	"100.000"	"45.2414"	"12954"	"12954"	"12923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"190.5"	""	"193.8"	""	"197.4"	""	"278.3"	"1.1"	"323.1"	"298.2"	""	"269"	"51"	"31.000"	"24.000"	"0.000103210120319165"	""	"7.476E-05"	"0.0001908"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIFTGGVGK"	"[R].vIFTGGVGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AXM5"	"Choline/ethanolaminephosphotransferase 1 OS=Rattus norvegicus OX=10116 GN=Cept1 PE=2 SV=1"	"Q6AXM5"	"Choline/ethanolaminephosphotransferase 1 OS=Rattus norvegicus OX=10116 GN=Cept1 PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"668.42322"	"1335.83916"	"1335.84004"	"-0.66"	"-0.00044"	"6/64"	"6"	"64"	"1696327.76702881"	"HCD"	"MS2"	"51.88443"	"161.4"	"100.000"	"44.9818"	"12799"	"12799"	"12768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.6"	""	"205.8"	""	"222.2"	""	"277.1"	""	"320.4"	"313.7"	""	"269"	"40"	"31.000"	"24.000"	"0.00137316360558683"	"19"	"0.0001308"	"0.0002104"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGTAIAAVK"	"[R].fGTAIAAVk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"668.42346"	"1335.83965"	"1335.84004"	"-0.30"	"-0.00020"	"7/64"	"7"	"64"	"7006348.99169922"	"HCD"	"MS2"	"0"	"545.8"	"100.000"	"45.6906"	"13084"	"13084"	"13063"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"533.2"	""	"731.2"	""	"696.9"	""	"970.5"	""	"1139.6"	"1116.7"	""	"269"	"45"	"31.000"	"24.000"	"0.000386119988282321"	"21"	"0.0001308"	"0.0002404"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGTAIAAVK"	"[R].fGTAIAAVk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"668.42346"	"1335.83965"	"1335.84004"	"-0.30"	"-0.00020"	"8/64"	"8"	"64"	"7907414.2958374"	"HCD"	"MS2"	"0"	"571.4"	"100.000"	"45.9571"	"13242"	"13242"	"13227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"546.9"	""	"754.2"	""	"738.6"	""	"1039.3"	"0.4"	"1162.5"	"1185.4"	""	"269"	"57"	"31.000"	"24.000"	"3.00415463970707E-05"	"22"	"0.0001308"	"0.0002368"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTVGQFK"	"[K].vVTVGQFk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"668.42365"	"1335.84001"	"1335.84004"	"-0.02"	"-0.00001"	"12/60"	"12"	"60"	"8047651.83508301"	"HCD"	"MS2"	"0"	"586.3"	"100.000"	"42.2975"	"11712"	"11712"	"11692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"916.1"	""	"832.3"	""	"838.4"	""	"929.0"	""	"995.1"	"1037.8"	""	"269"	"35"	"31.000"	"24.000"	"0.00444347032694516"	"23"	"0.0001889"	"0.0009253"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFVLNLGK"	"[K].sFVLNLGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"668.42377"	"1335.84026"	"1335.84004"	"0.16"	"0.00011"	"12/62"	"12"	"62"	"2567403.5111084"	"HCD"	"MS2"	"28.41909"	"189.4"	"100.000"	"54.5622"	"16682"	"16682"	"16656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.1"	""	"231.4"	""	"279.4"	""	"320.7"	"0.2"	"355.0"	"392.6"	""	"269"	"35"	"31.000"	"24.000"	"0.00397852676751183"	"18"	"0.0001889"	"0.0006272"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTVGQFK"	"[K].vVTVGQFk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"668.42377"	"1335.84026"	"1335.84004"	"0.16"	"0.00011"	"12/60"	"12"	"60"	"9445551.97174072"	"HCD"	"MS2"	"0"	"658.1"	"100.000"	"42.5558"	"11862"	"11862"	"11843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1019.6"	""	"909.2"	""	"968.0"	""	"1043.6"	""	"1124.0"	"1167.3"	""	"269"	"35"	"31.000"	"24.000"	"0.00427289562502394"	"23"	"0.0003839"	"0.0017"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFVLNLGK"	"[K].sFVLNLGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.42383"	"1335.84038"	"1335.84004"	"0.25"	"0.00017"	"12/62"	"12"	"62"	"2636928.35821533"	"HCD"	"MS2"	"34.24594"	"200.5"	"100.000"	"54.7615"	"16817"	"16817"	"16789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.0"	""	"262.5"	""	"275.4"	""	"334.4"	""	"376.3"	"416.8"	""	"269"	"37"	"31.000"	"24.000"	"0.0026468070596557"	"15"	"0.0001889"	"0.0007315"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFVLNLGK"	"[K].sFVLNLGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"668.42395"	"1335.84062"	"1335.84004"	"0.43"	"0.00029"	"14/62"	"14"	"62"	"2993448.15960693"	"HCD"	"MS2"	"0"	"243.8"	"100.000"	"55.1038"	"16957"	"16957"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"283.3"	""	"329.9"	""	"322.9"	""	"427.1"	""	"455.3"	"497.0"	""	"269"	"49"	"31.000"	"24.000"	"0.000181018217620525"	"22"	"0.0001889"	"0.0004985"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILTPPAAPLT"	"[R].lILTPPAAPLT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.42523"	"1335.84319"	"1335.84490"	"-1.29"	"-0.00086"	"6/96"	"6"	"96"	"1643887.92926025"	"HCD"	"MS2"	"20.24226"	"36.3"	"100.000"	"75.6433"	"25330"	"25330"	"25311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.3"	""	"44.4"	""	"49.7"	""	"61.0"	"0.1"	"72.2"	"78.5"	""	"247"	"28"	"30.000"	"23.000"	"0.0207810246542203"	"14"	"0.003197"	"0.06454"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILTPPAAPLT"	"[R].lILTPPAAPLT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.42566"	"1335.84404"	"1335.84490"	"-0.65"	"-0.00043"	"6/96"	"6"	"96"	"1653630.42285156"	"HCD"	"MS2"	"24.51136"	"39.2"	"100.000"	"75.6258"	"25271"	"25271"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.7"	""	"47.9"	""	"53.8"	""	"61.7"	"0.1"	"79.6"	"78.6"	""	"247"	"27"	"30.000"	"23.000"	"0.0272688584527834"	"14"	"0.002953"	"0.05278"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVLENFVGR"	"[K].sSVLENFVGR.[D]"	"N-Term(TMT6plex)"	"3"	"3"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"668.87463"	"1336.74199"	"1336.74223"	"-0.18"	"-0.00012"	"9/88"	"9"	"88"	"13989661.0006714"	"HCD"	"MS2"	"27.57917"	"1160.9"	"100.000"	"47.8276"	"14006"	"14006"	"13986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1633.7"	""	"1766.8"	""	"1809.3"	""	"1715.9"	""	"2076.4"	"2011.2"	""	"913"	"18"	"36.000"	"29.000"	"0.694129947322884"	"15"	"0.0001308"	"0.0002749"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVLENFVGR"	"[K].sSVLENFVGR.[D]"	"N-Term(TMT6plex)"	"3"	"3"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"668.87482"	"1336.74236"	"1336.74223"	"0.09"	"0.00006"	"9/88"	"9"	"88"	"8003446.99182129"	"HCD"	"MS2"	"26.23397"	"671.9"	"100.000"	"47.5314"	"13837"	"13837"	"13816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"965.3"	""	"1000.1"	""	"1043.9"	""	"997.5"	""	"1206.9"	"1157.5"	""	"910"	"21"	"36.000"	"29.000"	"0.35810583431127"	"15"	"0.0001308"	"0.0002564"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVIWDK"	"[R].mSVIWDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"668.88806"	"1336.76885"	"1336.76991"	"-0.80"	"-0.00053"	"6/56"	"6"	"56"	"28376496.9481201"	"HCD"	"MS2"	"42.88879"	"1365.8"	"64.625"	"52.1054"	"15699"	"15699"	"15682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2255.6"	""	"2118.5"	""	"2045.0"	""	"1931.0"	""	"2191.5"	"2376.1"	""	"849"	"33"	"36.000"	"29.000"	"0.0206479858816025"	"29"	"0.0008125"	"0.007827"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVIWDK"	"[R].mSVIWDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"446.26123"	"1336.76914"	"1336.76991"	"-0.58"	"-0.00026"	"7/56"	"7"	"56"	"6413092.91607666"	"HCD"	"MS2"	"42.35785"	"225.0"	"100.000"	"52.4485"	"15889"	"15889"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"337.4"	""	"317.8"	""	"338.9"	""	"303.4"	""	"405.2"	"428.7"	""	"801"	"16"	"36.000"	"29.000"	"0.958522960440357"	"22"	"0.002711"	"0.0422"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVIWDK"	"[R].mSVIWDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"668.88843"	"1336.76958"	"1336.76991"	"-0.25"	"-0.00017"	"12/56"	"12"	"56"	"55739358.7115479"	"HCD"	"MS2"	"25.66958"	"1546.8"	"37.983"	"52.3448"	"15847"	"15847"	"15830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2589.1"	""	"2360.5"	""	"2282.0"	""	"2054.6"	"2.9"	"2554.8"	"2785.9"	""	"802"	"37"	"36.000"	"29.000"	"0.008056462178561"	"29"	"0.001587"	"0.02137"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVIWDK"	"[R].mSVIWDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.4706"	"0.0000"	"1"	"1"	"1"	"446.26138"	"1336.76960"	"1336.76991"	"-0.24"	"-0.00011"	"7/56"	"7"	"56"	"5805204.331604"	"HCD"	"MS2"	"31.40637"	"213.4"	"100.000"	"52.2480"	"15757"	"15757"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.0"	""	"297.2"	""	"318.0"	""	"293.8"	""	"362.8"	"430.8"	""	"802"	"17"	"36.000"	"29.000"	"0.774719295123786"	"23"	"0.002424"	"0.03606"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVIWDK"	"[R].mSVIWDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"668.88928"	"1336.77129"	"1336.76991"	"1.03"	"0.00069"	"12/56"	"12"	"56"	"9733936.03070068"	"HCD"	"MS2"	"4.504609"	"699.5"	"92.687"	"52.4225"	"15828"	"15828"	"15810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1061.5"	""	"1021.6"	""	"1033.9"	""	"942.5"	"6.8"	"1205.5"	"1350.8"	""	"801"	"34"	"36.000"	"29.000"	"0.017242590750193"	"26"	"0.0005564"	"0.003614"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVIWDK"	"[R].mSVIWDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"668.88947"	"1336.77165"	"1336.76991"	"1.30"	"0.00087"	"12/56"	"12"	"56"	"7406573.88555908"	"HCD"	"MS2"	"5.870265"	"505.9"	"87.145"	"52.6645"	"15977"	"15977"	"15958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"769.7"	""	"739.4"	""	"734.5"	""	"677.3"	"1.5"	"896.3"	"972.5"	""	"796"	"35"	"35.000"	"29.000"	"0.0122710880419924"	"27"	"0.0005564"	"0.003637"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMANGILK"	"[K].mMAnGILk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"668.88953"	"1336.77178"	"1336.77329"	"-1.13"	"-0.00075"	"7/66"	"7"	"66"	"3298355.23065186"	"HCD"	"MS2"	"8.180406"	"280.4"	"100.000"	"47.0664"	"13647"	"13647"	"13624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"461.3"	""	"437.9"	""	"426.4"	""	"304.2"	""	"472.7"	"554.7"	""	"796"	"43"	"35.000"	"29.000"	"0.00188748310133577"	"23"	"0.0001859"	"0.0003704"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMANGILK"	"[K].mMAnGILk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"668.88953"	"1336.77178"	"1336.77329"	"-1.13"	"-0.00075"	"7/66"	"7"	"66"	"3408839.25177002"	"HCD"	"MS2"	"8.551219"	"289.5"	"100.000"	"47.3323"	"13804"	"13804"	"13778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"473.3"	""	"449.0"	""	"440.0"	""	"314.4"	""	"505.6"	"558.1"	""	"796"	"43"	"35.000"	"29.000"	"0.0018318211628538"	"23"	"0.0001889"	"0.0003943"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMANGILK"	"[K].mMAnGILk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"668.89075"	"1336.77422"	"1336.77329"	"0.70"	"0.00047"	"7/66"	"7"	"66"	"6181724.35736084"	"HCD"	"MS2"	"18.43787"	"504.6"	"100.000"	"46.6727"	"13486"	"13486"	"13464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"922.3"	""	"779.7"	""	"795.3"	""	"516.0"	""	"842.0"	"918.3"	""	"774"	"46"	"35.000"	"28.000"	"0.000926213197728885"	"24"	"0.0001889"	"0.0004903"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMANGILK"	"[K].mMAnGILk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"668.89075"	"1336.77422"	"1336.77329"	"0.70"	"0.00047"	"7/66"	"7"	"66"	"7257521.3795166"	"HCD"	"MS2"	"8.901642"	"568.2"	"100.000"	"46.9668"	"13654"	"13654"	"13634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"997.9"	""	"883.7"	""	"882.7"	""	"565.4"	"1.5"	"984.7"	"1059.7"	""	"774"	"43"	"35.000"	"28.000"	"0.0020031384396487"	"21"	"0.0001889"	"0.0007581"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFVQDEK"	"[K].lFVQDEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"668.89703"	"1336.78679"	"1336.78767"	"-0.66"	"-0.00044"	"12/56"	"12"	"56"	"3438576.20965576"	"HCD"	"MS2"	"22.49507"	"305.1"	"100.000"	"40.7930"	"11143"	"11143"	"11117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"504.0"	""	"399.7"	""	"417.5"	""	"457.0"	"7.3"	"549.8"	"553.2"	""	"733"	"32"	"35.000"	"28.000"	"0.0218310175603382"	"25"	"0.000523"	"0.003221"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFVQDEK"	"[K].lFVQDEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"668.89716"	"1336.78703"	"1336.78767"	"-0.48"	"-0.00032"	"6/56"	"6"	"56"	"4110082.41937256"	"HCD"	"MS2"	"9.611732"	"364.8"	"100.000"	"40.6737"	"11050"	"11050"	"11029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"583.3"	""	"480.8"	""	"522.6"	""	"507.5"	"10.0"	"665.6"	"685.5"	""	"733"	"29"	"35.000"	"28.000"	"0.0423715136763404"	"21"	"0.000523"	"0.002868"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSSPLSK"	"[K].imSSPLSk.[E]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"668.89856"	"1336.78984"	"1336.79104"	"-0.90"	"-0.00060"	"10/64"	"10"	"64"	"4244931.14080811"	"HCD"	"MS2"	"10.98855"	"286.1"	"100.000"	"35.7491"	"9076"	"9076"	"9049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"379.5"	""	"338.0"	""	"387.7"	""	"580.1"	"0.4"	"539.1"	"486.0"	""	"704"	"20"	"35.000"	"28.000"	"0.326996168146538"	"23"	"0.000523"	"0.002884"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSSPLSK"	"[K].imSSPLSk.[E]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"668.89880"	"1336.79033"	"1336.79104"	"-0.53"	"-0.00036"	"12/64"	"12"	"64"	"5085724.60144043"	"HCD"	"MS2"	"18.33143"	"343.5"	"100.000"	"35.6551"	"8994"	"8994"	"8971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.3"	""	"420.2"	""	"439.9"	""	"723.1"	""	"658.0"	"537.3"	""	"698"	"21"	"35.000"	"28.000"	"0.2696655241984"	"24"	"0.0006037"	"0.004126"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDLLYK"	"[K].nLDLLYk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"668.91559"	"1336.82390"	"1336.82406"	"-0.12"	"-0.00008"	"12/60"	"12"	"60"	"5142300.86425781"	"HCD"	"MS2"	"16.12863"	"399.6"	"100.000"	"52.0040"	"15707"	"15707"	"15686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"492.2"	""	"495.9"	""	"526.7"	""	"698.2"	""	"814.8"	"767.7"	""	"391"	"35"	"32.000"	"25.000"	"0.00576961403813279"	"20"	"0.0004557"	"0.002565"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDLLYK"	"[K].nLDLLYk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"668.91595"	"1336.82463"	"1336.82406"	"0.43"	"0.00029"	"12/60"	"12"	"60"	"5086328.29370117"	"HCD"	"MS2"	"11.79332"	"403.4"	"100.000"	"51.7991"	"15573"	"15573"	"15554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"508.0"	""	"512.4"	""	"542.9"	""	"680.7"	""	"784.9"	"797.7"	""	"385"	"35"	"32.000"	"25.000"	"0.0054504295919138"	"20"	"0.000523"	"0.003149"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPSTYNK"	"[K].gLPSTYNk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.39410"	"1337.78093"	"1337.78292"	"-1.49"	"-0.00100"	"7/60"	"7"	"60"	"1213544.4072876"	"HCD"	"MS2"	"25.54462"	"106.2"	"100.000"	"34.1001"	"8357"	"8357"	"8337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.4"	""	"123.5"	""	"139.8"	""	"175.3"	"1.0"	"204.6"	"209.7"	""	"654"	"25"	"35.000"	"28.000"	"0.103883782110247"	"14"	"0.0001889"	"0.0004919"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTLQNEK"	"[K].fTLQNEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"669.39478"	"1337.78227"	"1337.78292"	"-0.48"	"-0.00032"	"12/62"	"12"	"62"	"1702633.71685791"	"HCD"	"MS2"	"0"	"184.4"	"100.000"	"37.7205"	"9842"	"9842"	"9816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.0"	""	"211.7"	""	"239.9"	""	"296.8"	"4.2"	"401.3"	"380.6"	""	"662"	"32"	"35.000"	"28.000"	"0.0233253405828126"	"24"	"0.0003571"	"0.001533"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WATQVFK"	"[R].wATQVFk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"669.40265"	"1337.79802"	"1337.79818"	"-0.12"	"-0.00008"	"6/54"	"6"	"54"	"3623336.88110352"	"HCD"	"MS2"	"12.33052"	"300.4"	"100.000"	"48.8934"	"14395"	"14395"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"426.7"	""	"355.6"	""	"427.8"	""	"480.5"	""	"571.1"	"586.3"	""	"553"	"30"	"34.000"	"27.000"	"0.0300396684930118"	"20"	"0.0006037"	"0.00411"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WATQVFK"	"[R].wATQVFk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"669.40308"	"1337.79888"	"1337.79818"	"0.52"	"0.00035"	"6/54"	"6"	"54"	"2296529.48321533"	"HCD"	"MS2"	"12.46527"	"189.5"	"100.000"	"49.2788"	"14600"	"14600"	"14574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.7"	""	"241.3"	"3.8"	"279.7"	""	"283.6"	"6.5"	"356.7"	"374.0"	""	"543"	"18"	"34.000"	"27.000"	"0.430298501753193"	"21"	"0.000523"	"0.003161"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSLAFIK"	"[K].sNSLAFIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"669.41260"	"1337.81792"	"1337.81931"	"-1.04"	"-0.00069"	"7/72"	"7"	"72"	"6565200.12902832"	"HCD"	"MS2"	"8.747063"	"556.0"	"100.000"	"43.3441"	"12131"	"12131"	"12117"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"747.1"	""	"732.0"	""	"783.9"	""	"905.6"	"0.0"	"1032.6"	"1068.7"	""	"366"	"29"	"32.000"	"25.000"	"0.0257306696915774"	""	"0.0003839"	"0.001803"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVTISGQK"	"[R].fVTISGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"669.41266"	"1337.81804"	"1337.81931"	"-0.95"	"-0.00063"	"7/62"	"7"	"62"	"5409617.85455322"	"HCD"	"MS2"	"31.0414"	"431.4"	"100.000"	"40.0136"	"10780"	"10780"	"10757"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"569.3"	""	"538.7"	""	"549.5"	""	"733.8"	""	"814.8"	"890.3"	""	"366"	"43"	"32.000"	"25.000"	"0.000875893068950427"	""	"0.0001889"	"0.0006563"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSLAFIK"	"[K].sNSLAFIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"669.41272"	"1337.81816"	"1337.81931"	"-0.86"	"-0.00057"	"7/72"	"7"	"72"	"4984115.85583496"	"HCD"	"MS2"	"15.07155"	"431.8"	"100.000"	"43.6171"	"12291"	"12291"	"12273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"564.2"	""	"550.5"	""	"604.4"	""	"728.7"	"5.7"	"825.6"	"814.6"	""	"366"	"28"	"32.000"	"25.000"	"0.0304404515017741"	"24"	"0.0002277"	"0.001176"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVTISGQK"	"[R].fVTISGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"669.41321"	"1337.81914"	"1337.81931"	"-0.13"	"-0.00008"	"7/62"	"7"	"62"	"5107794.63745117"	"HCD"	"MS2"	"26.29266"	"392.7"	"100.000"	"40.1323"	"10873"	"10873"	"10845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"519.5"	""	"488.4"	""	"502.5"	""	"670.4"	""	"736.3"	"809.2"	""	"368"	"45"	"32.000"	"25.000"	"0.000576524573274067"	""	"0.0001889"	"0.000904"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFEIVK"	"[R].fPFEIVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"669.41473"	"1337.82219"	"1337.82333"	"-0.85"	"-0.00057"	"10/48"	"10"	"48"	"9730652.41064453"	"HCD"	"MS2"	"3.832105"	"343.2"	"58.220"	"68.2637"	"22267"	"22267"	"22250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"518.2"	""	"472.4"	""	"504.1"	""	"558.2"	"1.5"	"594.1"	"599.4"	""	"324"	"27"	"32.000"	"25.000"	"0.035687408701466"	"22"	"0.001846"	"0.02659"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFELVK"	"[R].fPFELVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"669.41473"	"1337.82219"	"1337.82333"	"-0.85"	"-0.00057"	"10/48"	"10"	"48"	"9730652.41064453"	"HCD"	"MS2"	"3.832105"	"343.2"	"58.220"	"68.2637"	"22267"	"22267"	"22250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"518.2"	""	"472.4"	""	"504.1"	""	"558.2"	"1.5"	"594.1"	"599.4"	""	"324"	"27"	"32.000"	"25.000"	"0.035687408701466"	"22"	"0.001846"	"0.02659"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFLEFK"	"[R].vPFLEFk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"669.41498"	"1337.82268"	"1337.82333"	"-0.49"	"-0.00033"	"6/48"	"6"	"48"	"8184958.74023438"	"HCD"	"MS2"	"1.713302"	"411.7"	"91.756"	"66.8837"	"21764"	"21764"	"21747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"554.1"	""	"705.9"	""	"589.7"	""	"605.0"	"5.9"	"750.9"	"686.9"	""	"330"	"25"	"32.000"	"25.000"	"0.047586519801589"	"25"	"0.00103"	"0.01139"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFLEFK"	"[R].vPFLEFk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"669.41516"	"1337.82305"	"1337.82333"	"-0.21"	"-0.00014"	"6/48"	"6"	"48"	"5594991.30187988"	"HCD"	"MS2"	"6.08357"	"308.2"	"100.000"	"66.5953"	"21646"	"21646"	"21619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.1"	""	"541.0"	""	"441.5"	""	"469.0"	""	"554.5"	"487.1"	""	"327"	"32"	"32.000"	"25.000"	"0.0106786845357862"	""	"0.0005564"	"0.003597"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFEIVK"	"[R].fPFEIVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"669.41516"	"1337.82305"	"1337.82333"	"-0.21"	"-0.00014"	"6/48"	"6"	"48"	"4473968.56506348"	"HCD"	"MS2"	"24.45403"	"289.8"	"100.000"	"67.9566"	"22141"	"22141"	"22122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"421.7"	""	"416.5"	""	"443.1"	""	"446.9"	""	"504.4"	"511.0"	""	"327"	"28"	"32.000"	"25.000"	"0.0280878021300266"	"23"	"0.0008731"	"0.008627"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFELVK"	"[R].fPFELVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"669.41516"	"1337.82305"	"1337.82333"	"-0.21"	"-0.00014"	"6/48"	"6"	"48"	"4473968.56506348"	"HCD"	"MS2"	"24.45403"	"289.8"	"100.000"	"67.9566"	"22141"	"22141"	"22122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"421.7"	""	"416.5"	""	"443.1"	""	"446.9"	""	"504.4"	"511.0"	""	"327"	"28"	"32.000"	"25.000"	"0.0280878021300266"	"23"	"0.0008731"	"0.008627"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFEIVK"	"[R].fPFEIVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"669.41522"	"1337.82317"	"1337.82333"	"-0.12"	"-0.00008"	"10/48"	"10"	"48"	"6093544.38751221"	"HCD"	"MS2"	"11.10269"	"368.1"	"100.000"	"67.9483"	"22189"	"22189"	"22170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"545.8"	""	"505.1"	""	"535.8"	""	"607.1"	""	"634.6"	"656.3"	""	"324"	"24"	"32.000"	"25.000"	"0.0712057417009276"	"20"	"0.001125"	"0.01516"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFELVK"	"[R].fPFELVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"669.41522"	"1337.82317"	"1337.82333"	"-0.12"	"-0.00008"	"10/48"	"10"	"48"	"6093544.38751221"	"HCD"	"MS2"	"11.10269"	"368.1"	"100.000"	"67.9483"	"22189"	"22189"	"22170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"545.8"	""	"505.1"	""	"535.8"	""	"607.1"	""	"634.6"	"656.3"	""	"324"	"24"	"32.000"	"25.000"	"0.0712057417009276"	"20"	"0.001125"	"0.01516"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFEIVK"	"[R].fPFEIVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"669.41522"	"1337.82317"	"1337.82333"	"-0.12"	"-0.00008"	"6/48"	"6"	"48"	"3603116.25073242"	"HCD"	"MS2"	"13.78315"	"205.5"	"100.000"	"68.5867"	"22398"	"22398"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.2"	""	"285.0"	""	"299.6"	""	"329.7"	"3.0"	"360.0"	"357.2"	""	"324"	"27"	"32.000"	"25.000"	"0.031370035815935"	"22"	"0.0008125"	"0.007704"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFELVK"	"[R].fPFELVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"669.41522"	"1337.82317"	"1337.82333"	"-0.12"	"-0.00008"	"6/48"	"6"	"48"	"3603116.25073242"	"HCD"	"MS2"	"13.78315"	"205.5"	"100.000"	"68.5867"	"22398"	"22398"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.2"	""	"285.0"	""	"299.6"	""	"329.7"	"3.0"	"360.0"	"357.2"	""	"324"	"27"	"32.000"	"25.000"	"0.031370035815935"	"22"	"0.0008125"	"0.007704"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFLEFK"	"[R].vPFLEFk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"669.41522"	"1337.82317"	"1337.82333"	"-0.12"	"-0.00008"	"6/48"	"6"	"48"	"9077590.05279541"	"HCD"	"MS2"	"0.8686236"	"427.0"	"86.129"	"66.9532"	"21739"	"21739"	"21721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"567.5"	""	"711.5"	""	"643.9"	""	"626.9"	""	"765.2"	"728.0"	""	"324"	"30"	"32.000"	"25.000"	"0.0171599103478721"	""	"0.0009727"	"0.01051"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFEIVK"	"[R].fPFEIVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"669.41522"	"1337.82317"	"1337.82333"	"-0.12"	"-0.00008"	"10/48"	"10"	"48"	"8167817.26342773"	"HCD"	"MS2"	"4.26533"	"475.1"	"100.000"	"68.2598"	"22316"	"22316"	"22298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"702.1"	""	"670.0"	""	"714.2"	""	"746.9"	""	"810.2"	"855.3"	""	"324"	"25"	"32.000"	"25.000"	"0.0542644011435681"	"21"	"0.00103"	"0.01173"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFELVK"	"[R].fPFELVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"669.41522"	"1337.82317"	"1337.82333"	"-0.12"	"-0.00008"	"10/48"	"10"	"48"	"8167817.26342773"	"HCD"	"MS2"	"4.26533"	"475.1"	"100.000"	"68.2598"	"22316"	"22316"	"22298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"702.1"	""	"670.0"	""	"714.2"	""	"746.9"	""	"810.2"	"855.3"	""	"324"	"25"	"32.000"	"25.000"	"0.0542644011435681"	"21"	"0.00103"	"0.01173"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFLEFK"	"[R].vPFLEFk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"669.41528"	"1337.82329"	"1337.82333"	"-0.03"	"-0.00002"	"6/48"	"6"	"48"	"4547003.93127441"	"HCD"	"MS2"	"20.90211"	"259.0"	"100.000"	"66.6607"	"21620"	"21620"	"21593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"364.0"	""	"451.2"	""	"376.1"	""	"378.0"	""	"467.9"	"416.2"	""	"324"	"30"	"32.000"	"25.000"	"0.0167307347733346"	""	"0.0006037"	"0.004756"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFEIVK"	"[R].fPFEIVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"669.41565"	"1337.82402"	"1337.82333"	"0.52"	"0.00035"	"6/48"	"6"	"48"	"2066667.3203125"	"HCD"	"MS2"	"20.55266"	"136.8"	"100.000"	"67.6078"	"22050"	"22050"	"22026"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.8"	""	"197.1"	""	"214.4"	""	"207.0"	"0.6"	"238.2"	"249.0"	""	"326"	"26"	"32.000"	"25.000"	"0.0375135016237587"	"21"	"0.0006037"	"0.004186"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFELVK"	"[R].fPFELVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"669.41565"	"1337.82402"	"1337.82333"	"0.52"	"0.00035"	"6/48"	"6"	"48"	"2066667.3203125"	"HCD"	"MS2"	"20.55266"	"136.8"	"100.000"	"67.6078"	"22050"	"22050"	"22026"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.8"	""	"197.1"	""	"214.4"	""	"207.0"	"0.6"	"238.2"	"249.0"	""	"326"	"26"	"32.000"	"25.000"	"0.0375135016237587"	"21"	"0.0006037"	"0.004186"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFEIVK"	"[R].fPFEIVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"669.41583"	"1337.82439"	"1337.82333"	"0.79"	"0.00053"	"5/48"	"5"	"48"	"2120043.32263184"	"HCD"	"MS2"	"0"	"137.9"	"100.000"	"67.6510"	"22017"	"22017"	"21999"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"207.7"	""	"203.5"	""	"201.9"	""	"197.7"	""	"241.4"	"256.1"	""	"310"	"15"	"31.000"	"24.000"	"0.509720027857774"	"15"	"0.0006037"	"0.005406"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFELVK"	"[R].fPFELVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"669.41583"	"1337.82439"	"1337.82333"	"0.79"	"0.00053"	"5/48"	"5"	"48"	"2120043.32263184"	"HCD"	"MS2"	"0"	"137.9"	"100.000"	"67.6510"	"22017"	"22017"	"21999"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"207.7"	""	"203.5"	""	"201.9"	""	"197.7"	""	"241.4"	"256.1"	""	"310"	"15"	"31.000"	"24.000"	"0.509720027857774"	"15"	"0.0006037"	"0.005406"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILPDLAVLR"	"[K].vILPDLAVLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"669.43829"	"1337.86931"	"1337.87179"	"-1.85"	"-0.00124"	"7/72"	"7"	"72"	"2928644.86651611"	"HCD"	"MS2"	"34.68706"	"115.2"	"100.000"	"71.9766"	"23782"	"23782"	"23761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.2"	""	"153.2"	""	"188.7"	""	"159.0"	"0.3"	"209.9"	"233.3"	""	"106"	"29"	"27.000"	"20.000"	"0.00703519062596762"	"17"	"0.000523"	"0.002808"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILPDLAVLR"	"[K].vILPDLAVLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"669.43903"	"1337.87078"	"1337.87179"	"-0.76"	"-0.00051"	"7/72"	"7"	"72"	"2969855.66906738"	"HCD"	"MS2"	"35.95104"	"111.8"	"100.000"	"71.9222"	"23811"	"23811"	"23793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.5"	""	"151.2"	""	"181.4"	""	"158.1"	""	"188.0"	"232.7"	""	"106"	"38"	"27.000"	"20.000"	"0.00077853092715125"	"19"	"0.0003839"	"0.001587"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGR"	"[K].lLQDFFNGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"669.87134"	"1338.73540"	"1338.73675"	"-1.01"	"-0.00068"	"7/76"	"7"	"76"	"8422430.42163086"	"HCD"	"MS2"	"46.33249"	"413.4"	"100.000"	"67.0268"	"21770"	"21770"	"21753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"546.7"	""	"620.2"	""	"581.3"	""	"752.8"	""	"679.8"	"739.8"	""	"843"	"24"	"36.000"	"29.000"	"0.154098204664932"	"20"	"0.0001889"	"0.0008989"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFQVAFNR"	"[K].dLFQVAFNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"669.87152"	"1338.73577"	"1338.73675"	"-0.74"	"-0.00049"	"7/74"	"7"	"74"	"4144433.41156006"	"HCD"	"MS2"	"31.17845"	"222.9"	"100.000"	"58.5634"	"18372"	"18372"	"18341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"323.9"	""	"284.8"	""	"283.8"	""	"412.7"	""	"380.3"	"428.9"	""	"838"	"37"	"36.000"	"29.000"	"0.00809494724830091"	"22"	"0.0001308"	"0.0003027"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFQVAFNR"	"[K].dLFQVAFNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"669.87164"	"1338.73601"	"1338.73675"	"-0.55"	"-0.00037"	"5/74"	"5"	"74"	"6646954.60784912"	"HCD"	"MS2"	"17.04369"	"407.7"	"100.000"	"58.4843"	"18285"	"18285"	"18266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"585.3"	""	"558.6"	""	"605.3"	""	"734.5"	""	"695.2"	"679.8"	""	"850"	"26"	"36.000"	"29.000"	"0.106020275895076"	"20"	"0.0001889"	"0.000416"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGR"	"[K].lLQDFFNGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"669.87201"	"1338.73674"	"1338.73675"	"-0.01"	"0.00000"	"7/76"	"7"	"76"	"8121762.75177002"	"HCD"	"MS2"	"25.51535"	"379.9"	"100.000"	"66.9891"	"21807"	"21807"	"21795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"535.5"	""	"547.4"	""	"541.1"	""	"690.1"	""	"612.2"	"668.8"	""	"852"	"26"	"36.000"	"29.000"	"0.0973665090237934"	"16"	"0.0001889"	"0.0008616"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLFTEVTR"	"[K].mLLFTEVTR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"669.88586"	"1338.76445"	"1338.76527"	"-0.61"	"-0.00041"	"7/70"	"7"	"70"	"6601331.51098633"	"HCD"	"MS2"	"18.24731"	"295.1"	"100.000"	"60.9269"	"19332"	"19332"	"19315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"424.0"	""	"466.5"	""	"470.2"	""	"361.4"	"0.4"	"522.7"	"548.9"	""	"727"	"37"	"35.000"	"28.000"	"0.00708768512012049"	"20"	"0.0001889"	"0.0004842"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLFTEVTR"	"[K].mLLFTEVTR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"669.88599"	"1338.76470"	"1338.76527"	"-0.43"	"-0.00029"	"7/70"	"7"	"70"	"12101203.4400635"	"HCD"	"MS2"	"7.799728"	"432.1"	"84.567"	"60.4842"	"19098"	"19098"	"19081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"639.9"	""	"748.0"	""	"727.9"	""	"499.7"	""	"730.9"	"745.1"	""	"727"	"42"	"35.000"	"28.000"	"0.00231475171850027"	"20"	"0.0001889"	"0.000633"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLFTEVTR"	"[K].mLLFTEVTR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"669.88611"	"1338.76494"	"1338.76527"	"-0.25"	"-0.00017"	"7/70"	"7"	"70"	"10125915.2744141"	"HCD"	"MS2"	"16.0072"	"408.3"	"100.000"	"60.6198"	"19206"	"19206"	"19187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"598.1"	""	"706.9"	""	"654.3"	""	"484.6"	"1.4"	"695.7"	"722.5"	""	"730"	"37"	"35.000"	"28.000"	"0.006672565788921"	"18"	"0.0001889"	"0.000375"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGSVDFK"	"[R].lDGSVDFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"669.88666"	"1338.76604"	"1338.76694"	"-0.67"	"-0.00045"	"5/64"	"5"	"64"	"2526508.29541016"	"HCD"	"MS2"	"0"	"239.6"	"100.000"	"43.8114"	"12321"	"12321"	"12303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"241.6"	""	"257.7"	""	"214.0"	""	"529.0"	"2.4"	"574.4"	"460.7"	""	"723"	"31"	"35.000"	"28.000"	"0.0257696370390737"	"24"	"0.0001889"	"0.0004096"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLFTEVTR"	"[K].mLLFTEVTR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"669.88702"	"1338.76677"	"1338.76527"	"1.12"	"0.00075"	"7/70"	"7"	"70"	"5534426.34643555"	"HCD"	"MS2"	"25.49421"	"237.9"	"100.000"	"60.8023"	"19227"	"19227"	"19209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"330.0"	""	"356.9"	""	"362.3"	""	"327.8"	"1.1"	"427.9"	"447.9"	""	"725"	"36"	"35.000"	"28.000"	"0.00838123486438653"	"20"	"0.0001889"	"0.0004393"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGPYSSK"	"[K].eLGPYSSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"669.88721"	"1338.76714"	"1338.76694"	"0.15"	"0.00010"	"6/68"	"6"	"68"	"1877237.94274902"	"HCD"	"MS2"	"19.05648"	"161.9"	"100.000"	"34.6941"	"8600"	"8600"	"8574"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.5"	""	"206.6"	""	"202.3"	""	"222.4"	""	"356.9"	"351.0"	""	"698"	"9"	"35.000"	"28.000"	"4.23472708812277"	"20"	"0.001846"	"0.0264"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGSVDFK"	"[R].lDGSVDFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"669.88745"	"1338.76763"	"1338.76694"	"0.51"	"0.00034"	"12/64"	"12"	"64"	"2595189.56512451"	"HCD"	"MS2"	"0"	"250.2"	"100.000"	"44.0591"	"12472"	"12472"	"12447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.1"	""	"275.2"	""	"233.7"	""	"538.0"	""	"597.2"	"468.6"	""	"714"	"34"	"35.000"	"28.000"	"0.0138569680658661"	"25"	"0.0001889"	"0.0004097"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGPYSSK"	"[K].eLGPYSSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"669.88751"	"1338.76775"	"1338.76694"	"0.60"	"0.00040"	"7/68"	"7"	"68"	"2514233.05792236"	"HCD"	"MS2"	"0"	"223.5"	"100.000"	"34.6895"	"8641"	"8641"	"8618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"326.9"	""	"304.6"	""	"296.0"	""	"303.0"	""	"451.2"	"440.1"	""	"714"	"29"	"35.000"	"28.000"	"0.0401483975706193"	"19"	"0.0001889"	"0.0008377"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITDFGLSK"	"[K].iTDFGLSk.[ME]"	"N-Term(TMT6plex); K8(TMT6plex)"	"0"	"1"	""	""	"P47197"	"RAC-beta serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt2 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"669.90485"	"1338.80242"	"1338.80332"	"-0.68"	"-0.00045"	"14/66"	"14"	"66"	"8234519.50762939"	"HCD"	"MS2"	"6.813723"	"639.5"	"100.000"	"51.9554"	"15637"	"15637"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"885.1"	""	"880.2"	""	"951.6"	""	"1046.4"	""	"1182.4"	"1112.1"	""	"401"	"48"	"33.000"	"26.000"	"0.000287815631387408"	""	"0.0001889"	"0.0007745"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDFGLSK"	"[K].lTDFGLSk.[ME]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"Q810W7; Q63531"	"Microtubule-associated serine/threonine-protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mast1 PE=1 SV=1; Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"669.90485"	"1338.80242"	"1338.80332"	"-0.68"	"-0.00045"	"14/66"	"14"	"66"	"8234519.50762939"	"HCD"	"MS2"	"6.813723"	"639.5"	"100.000"	"51.9554"	"15637"	"15637"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"885.1"	""	"880.2"	""	"951.6"	""	"1046.4"	""	"1182.4"	"1112.1"	""	"401"	"48"	"33.000"	"26.000"	"0.000287815631387408"	""	"0.0001889"	"0.0007745"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITDFGLSK"	"[K].iTDFGLSk.[ME]"	"N-Term(TMT6plex); K8(TMT6plex)"	"0"	"1"	""	""	"P47197"	"RAC-beta serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt2 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"669.90509"	"1338.80290"	"1338.80332"	"-0.31"	"-0.00021"	"7/66"	"7"	"66"	"8642592.48144531"	"HCD"	"MS2"	"6.593209"	"678.1"	"100.000"	"52.1488"	"15767"	"15767"	"15750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"996.0"	""	"913.1"	""	"972.6"	""	"1120.7"	"3.5"	"1242.9"	"1172.0"	""	"401"	"43"	"33.000"	"26.000"	"0.000995667604507924"	""	"0.0001889"	"0.0009708"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDFGLSK"	"[K].lTDFGLSk.[ME]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"Q810W7; Q63531"	"Microtubule-associated serine/threonine-protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mast1 PE=1 SV=1; Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"669.90509"	"1338.80290"	"1338.80332"	"-0.31"	"-0.00021"	"7/66"	"7"	"66"	"8642592.48144531"	"HCD"	"MS2"	"6.593209"	"678.1"	"100.000"	"52.1488"	"15767"	"15767"	"15750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"996.0"	""	"913.1"	""	"972.6"	""	"1120.7"	"3.5"	"1242.9"	"1172.0"	""	"401"	"43"	"33.000"	"26.000"	"0.000995667604507924"	""	"0.0001889"	"0.0009708"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYPSSLSK"	"[K].vYPSSLSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"669.90515"	"1338.80303"	"1338.80332"	"-0.22"	"-0.00015"	"7/62"	"7"	"62"	"9492685.65808105"	"HCD"	"MS2"	"0"	"703.7"	"100.000"	"37.3974"	"9709"	"9709"	"9688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1044.6"	""	"954.9"	""	"1028.2"	""	"1084.5"	"14.1"	"1278.7"	"1258.6"	""	"401"	"41"	"33.000"	"26.000"	"0.0016073645170923"	"23"	"0.0003839"	"0.00177"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYPSSLSK"	"[K].vYPSSLSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"669.90521"	"1338.80315"	"1338.80332"	"-0.13"	"-0.00009"	"7/62"	"7"	"62"	"10038862.680603"	"HCD"	"MS2"	"0"	"676.3"	"100.000"	"37.4448"	"9772"	"9772"	"9745"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1083.8"	""	"919.5"	""	"951.9"	""	"1038.7"	"10.4"	"1167.2"	"1229.4"	""	"402"	"40"	"33.000"	"26.000"	"0.00222431380579511"	"22"	"0.0002277"	"0.001333"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMNIFLK"	"[K].vmNIFLk.[D]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"669.91364"	"1338.81999"	"1338.82195"	"-1.46"	"-0.00098"	"6/58"	"6"	"58"	"6248120.81335449"	"HCD"	"MS2"	"0"	"410.5"	"100.000"	"49.8570"	"14785"	"14785"	"14762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"350.8"	""	"310.5"	""	"267.5"	""	"1682.2"	"6.2"	"637.2"	"635.2"	""	"329"	"30"	"32.000"	"25.000"	"0.0183724004259902"	"16"	"0.00109"	"0.01503"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMNIFLK"	"[K].vmNIFLk.[D]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"669.91406"	"1338.82085"	"1338.82195"	"-0.82"	"-0.00055"	"6/58"	"6"	"58"	"6274592.25268555"	"HCD"	"MS2"	"0"	"385.8"	"100.000"	"50.0814"	"14923"	"14923"	"14905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.6"	""	"319.7"	""	"271.9"	""	"1488.2"	""	"617.5"	"624.1"	""	"327"	"28"	"32.000"	"25.000"	"0.0256163799962682"	"15"	"0.00103"	"0.01152"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMNIFLK"	"[K].vmNIFLk.[D]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"669.91449"	"1338.82170"	"1338.82195"	"-0.19"	"-0.00012"	"10/58"	"10"	"58"	"4954371.79309082"	"HCD"	"MS2"	"48.50401"	"321.3"	"100.000"	"50.4076"	"15004"	"15004"	"14984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"432.1"	""	"374.2"	""	"310.9"	""	"868.9"	"0.0"	"503.4"	"551.6"	""	"313"	"19"	"31.000"	"24.000"	"0.183448574708282"	"15"	"0.001217"	"0.01782"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMNIFLK"	"[K].vmNIFLk.[D]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"669.91534"	"1338.82341"	"1338.82195"	"1.09"	"0.00073"	"6/58"	"6"	"58"	"5153349.01647949"	"HCD"	"MS2"	"47.32513"	"319.3"	"100.000"	"50.6082"	"15136"	"15136"	"15119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"439.3"	""	"369.7"	""	"308.4"	""	"833.9"	""	"536.3"	"537.5"	""	"313"	"18"	"31.000"	"24.000"	"0.242389800859803"	"14"	"0.001217"	"0.01731"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVQFTTK"	"[K].tGVQFTTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"670.40350"	"1339.79973"	"1339.79857"	"0.86"	"0.00058"	"7/76"	"7"	"76"	"2738961.99328613"	"HCD"	"MS2"	"0"	"247.6"	"100.000"	"35.0104"	"8730"	"8730"	"8702"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"337.7"	""	"315.8"	""	"338.9"	""	"426.6"	"1.5"	"446.6"	"479.2"	""	"400"	"35"	"33.000"	"26.000"	"0.00568892221489583"	"21"	"0.0001889"	"0.0005708"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVQFTTK"	"[K].tGVQFTTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"670.40350"	"1339.79973"	"1339.79857"	"0.86"	"0.00058"	"5/76"	"5"	"76"	"2862639.22827148"	"HCD"	"MS2"	"0"	"273.1"	"100.000"	"35.0978"	"8809"	"8809"	"8778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"371.3"	""	"340.8"	""	"371.5"	""	"450.5"	""	"535.3"	"521.6"	""	"400"	"31"	"33.000"	"26.000"	"0.0168666951552855"	"17"	"0.0005564"	"0.003445"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHDQLAGK"	"[K].lHDQLAGk.[-]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"670.40759"	"1339.80791"	"1339.80981"	"-1.42"	"-0.00095"	"14/64"	"14"	"64"	"481907.783081055"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"29.0831"	"6317"	"6317"	"6304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.0"	""	"49.9"	""	"51.3"	""	"63.1"	"1.5"	"75.3"	"59.0"	""	"331"	"38"	"32.000"	"25.000"	"0.00262904486892933"	""	"0"	"0.0001801"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHDQLAGK"	"[K].lHDQLAGk.[-]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"670.40778"	"1339.80828"	"1339.80981"	"-1.14"	"-0.00077"	"7/64"	"7"	"64"	"451373.894897461"	"HCD"	"MS2"	"100"	"37.4"	"100.000"	"29.1227"	"6376"	"6376"	"6359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.6"	""	"43.9"	""	"55.1"	""	"61.6"	""	"75.9"	"61.4"	""	"342"	"27"	"32.000"	"25.000"	"0.0345140648189547"	"21"	"0.0001308"	"0.0002291"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPWLEAR"	"[K].lLLPWLEAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"670.41797"	"1339.82866"	"1339.82992"	"-0.94"	"-0.00063"	"7/64"	"7"	"64"	"11835524.7078857"	"HCD"	"MS2"	"4.937504"	"394.2"	"100.000"	"79.3901"	"26848"	"26848"	"26831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"442.6"	""	"511.1"	""	"503.4"	""	"708.2"	"4.0"	"746.4"	"825.7"	""	"251"	"40"	"30.000"	"23.000"	"0.00132630597406314"	"22"	"0.0001889"	"0.000782"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPWLEAR"	"[K].lLLPWLEAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"670.41803"	"1339.82878"	"1339.82992"	"-0.85"	"-0.00057"	"7/64"	"7"	"64"	"4785116.52667236"	"HCD"	"MS2"	"0.5957639"	"177.2"	"100.000"	"79.7040"	"26976"	"26976"	"26959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.8"	"3.2"	"202.4"	""	"240.1"	""	"321.4"	"2.2"	"336.8"	"375.7"	""	"247"	"41"	"30.000"	"23.000"	"0.000952065784294571"	"23"	"0.0001889"	"0.0004788"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPWLEAR"	"[K].lLLPWLEAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"670.41840"	"1339.82952"	"1339.82992"	"-0.30"	"-0.00020"	"7/64"	"7"	"64"	"5518552.31018066"	"HCD"	"MS2"	"0"	"177.5"	"90.885"	"79.7161"	"26930"	"26930"	"26913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"206.6"	""	"213.4"	""	"222.4"	""	"302.7"	"0.2"	"353.4"	"386.7"	""	"246"	"41"	"30.000"	"23.000"	"0.000941683826500846"	"23"	"0.0001889"	"0.0004605"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPWLEAR"	"[K].lLLPWLEAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"670.41840"	"1339.82952"	"1339.82992"	"-0.30"	"-0.00020"	"7/64"	"7"	"64"	"9917570.50823975"	"HCD"	"MS2"	"5.424211"	"345.1"	"100.000"	"79.4025"	"26802"	"26802"	"26785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"403.0"	""	"422.5"	""	"427.1"	""	"644.2"	""	"648.4"	"731.4"	""	"246"	"41"	"30.000"	"23.000"	"0.000943854631915038"	"23"	"0.0001889"	"0.0006381"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQLVAAGAVR"	"[K].iLQLVAAGAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.43402"	"1339.86077"	"1339.86229"	"-1.14"	"-0.00076"	"8/98"	"8"	"98"	"2430138.53320313"	"HCD"	"MS2"	"14.62838"	"99.9"	"100.000"	"62.1555"	"19833"	"19833"	"19811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.0"	""	"145.5"	""	"140.6"	""	"149.9"	"3.4"	"198.4"	"190.2"	""	"165"	"39"	"29.000"	"22.000"	"0.00107759098270877"	"15"	"0"	"7.535E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPLGLSPK"	"[K].iGPLGLSPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"447.29495"	"1339.87030"	"1339.87134"	"-0.78"	"-0.00035"	"7/64"	"7"	"64"	"11700492.1257935"	"HCD"	"MS2"	"14.70941"	"379.0"	"100.000"	"49.5663"	"14714"	"14714"	"14686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"489.0"	""	"531.0"	""	"540.1"	""	"649.5"	"1.1"	"678.5"	"701.1"	""	"140"	"40"	"28.000"	"21.000"	"0.000653278010557894"	""	"0.0001308"	"0.0002849"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPLGLSPK"	"[K].iGPLGLSPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"447.29514"	"1339.87085"	"1339.87134"	"-0.37"	"-0.00016"	"9/64"	"9"	"64"	"6155447.05999756"	"HCD"	"MS2"	"6.818397"	"215.3"	"100.000"	"49.2477"	"14540"	"14540"	"14511"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.9"	""	"306.1"	""	"307.0"	""	"377.7"	""	"395.2"	"393.1"	""	"140"	"24"	"28.000"	"21.000"	"0.027485145477972"	"20"	"0.0001889"	"0.0005314"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPLGLSPK"	"[K].iGPLGLSPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.43915"	"1339.87102"	"1339.87134"	"-0.24"	"-0.00016"	"8/64"	"8"	"64"	"8292993.15698242"	"HCD"	"MS2"	"3.514619"	"488.8"	"93.338"	"49.7804"	"14800"	"14800"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"675.5"	""	"651.6"	""	"719.5"	""	"767.1"	"7.4"	"884.2"	"925.3"	""	"140"	"36"	"28.000"	"21.000"	"0.0017381931737069"	"15"	"0.0001889"	"0.0007365"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPLGLSPK"	"[K].iGPLGLSPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"670.43933"	"1339.87139"	"1339.87134"	"0.03"	"0.00002"	"8/64"	"8"	"64"	"11070361.2249756"	"HCD"	"MS2"	"0"	"422.8"	"62.869"	"49.4917"	"14640"	"14640"	"14623"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"553.7"	""	"559.1"	""	"602.7"	""	"684.8"	"5.4"	"796.6"	"805.7"	""	"140"	"34"	"28.000"	"21.000"	"0.00270456883937848"	"20"	"0.0001889"	"0.0004962"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPLGLSPK"	"[K].iGPLGLSPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"670.43939"	"1339.87151"	"1339.87134"	"0.12"	"0.00008"	"8/64"	"8"	"64"	"11070390.5162354"	"HCD"	"MS2"	"0"	"654.0"	"100.000"	"49.4926"	"14684"	"14684"	"14654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"902.5"	""	"923.0"	""	"984.1"	""	"1060.3"	"0.1"	"1156.0"	"1165.8"	""	"140"	"35"	"28.000"	"21.000"	"0.00221359436211787"	"21"	"0.0001889"	"0.0008658"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPLGLSPK"	"[K].iGPLGLSPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"670.43945"	"1339.87163"	"1339.87134"	"0.21"	"0.00014"	"8/64"	"8"	"64"	"8342284.18579102"	"HCD"	"MS2"	"11.51474"	"529.7"	"100.000"	"49.1993"	"14520"	"14520"	"14495"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"772.1"	""	"745.5"	""	"738.5"	""	"880.3"	""	"940.6"	"942.8"	""	"140"	"35"	"28.000"	"21.000"	"0.0022547481538984"	"21"	"0.0001889"	"0.000782"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIMESGAK"	"[R].fIMESGAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"670.88647"	"1340.76567"	"1340.76483"	"0.63"	"0.00042"	"7/58"	"7"	"58"	"13362204.026001"	"HCD"	"MS2"	"5.936739"	"705.1"	"67.173"	"41.0497"	"11248"	"11248"	"11229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1081.4"	""	"1131.0"	""	"1244.9"	""	"824.9"	""	"1224.1"	"1162.3"	""	"615"	"33"	"34.000"	"27.000"	"0.0157704875577345"	""	"0.0002277"	"0.001293"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIMESGAK"	"[R].fIMESGAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"670.88660"	"1340.76592"	"1340.76483"	"0.81"	"0.00054"	"6/58"	"6"	"58"	"12614961.46698"	"HCD"	"MS2"	"6.02836"	"774.7"	"75.929"	"40.9009"	"11143"	"11143"	"11125"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1159.0"	""	"1262.9"	""	"1305.5"	""	"928.1"	"1.1"	"1367.9"	"1305.0"	""	"615"	"31"	"34.000"	"27.000"	"0.0251677922351448"	""	"0.0003146"	"0.001461"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVTHLVK"	"[K].wVTHLVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"447.61954"	"1340.84406"	"1340.84546"	"-1.05"	"-0.00047"	"8/48"	"8"	"48"	"4398285.50543213"	"HCD"	"MS2"	"12.85774"	"204.1"	"100.000"	"39.3182"	"10498"	"10498"	"10470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.9"	""	"239.0"	""	"237.2"	""	"368.4"	""	"422.6"	"415.7"	""	"241"	"21"	"30.000"	"23.000"	"0.0937534044002964"	""	"0.002711"	"0.04086"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLGQGLLLR"	"[K].eLLGQGLLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"670.92657"	"1340.84587"	"1340.84630"	"-0.32"	"-0.00021"	"8/82"	"8"	"82"	"4323696.9934082"	"HCD"	"MS2"	"10.05207"	"198.1"	"100.000"	"59.4639"	"18734"	"18734"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"253.9"	""	"253.0"	""	"276.7"	""	"336.9"	""	"371.0"	"387.4"	""	"241"	"53"	"30.000"	"23.000"	"6.69864630010837E-05"	""	"0"	"0.0001373"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLGQGLLLR"	"[K].eLLGQGLLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"670.92682"	"1340.84636"	"1340.84630"	"0.04"	"0.00003"	"8/82"	"8"	"82"	"5501292.36108398"	"HCD"	"MS2"	"10.78772"	"240.0"	"100.000"	"59.3604"	"18638"	"18638"	"18617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.6"	""	"282.7"	""	"329.3"	""	"429.6"	""	"444.6"	"482.7"	""	"240"	"55"	"30.000"	"23.000"	"3.70835451901631E-05"	""	"0"	"0.0001069"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQPAIVK"	"[K].nLQPAIVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"447.62665"	"1340.86539"	"1340.86659"	"-0.90"	"-0.00040"	"9/72"	"9"	"72"	"38892710.8023682"	"HCD"	"MS2"	"13.16958"	"759.0"	"55.171"	"38.1350"	"10055"	"10055"	"10033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1328.7"	""	"1222.6"	""	"1034.1"	""	"1334.3"	""	"1085.6"	"1166.0"	""	"186"	"30"	"29.000"	"22.000"	"0.00908830615488904"	""	"0.0003839"	"0.001786"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQPAIVK"	"[K].nLQPAIVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"447.62677"	"1340.86576"	"1340.86659"	"-0.62"	"-0.00028"	"9/72"	"9"	"72"	"36706791.5303955"	"HCD"	"MS2"	"29.37933"	"687.2"	"48.671"	"38.0349"	"9971"	"9971"	"9943"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1245.8"	""	"1093.6"	""	"923.1"	""	"1183.1"	""	"995.0"	"1050.7"	""	"186"	"30"	"29.000"	"22.000"	"0.00913025587008586"	""	"0.0006037"	"0.004647"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQPAIVK"	"[K].nLQPAIVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"670.93658"	"1340.86589"	"1340.86659"	"-0.52"	"-0.00035"	"11/72"	"11"	"72"	"8501342.99847412"	"HCD"	"MS2"	"19.71295"	"346.2"	"58.180"	"38.4052"	"10166"	"10166"	"10145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"628.8"	""	"542.7"	""	"460.5"	""	"546.8"	""	"534.3"	"560.0"	""	"186"	"31"	"29.000"	"22.000"	"0.00697401614679184"	""	"0.000523"	"0.002948"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQPAIVK"	"[K].nLQPAIVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"670.93665"	"1340.86601"	"1340.86659"	"-0.43"	"-0.00029"	"12/72"	"12"	"72"	"83941285.3913574"	"HCD"	"MS2"	"2.272694"	"1360.0"	"28.173"	"38.0120"	"9961"	"9961"	"9943"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2563.9"	""	"2213.5"	""	"1834.9"	""	"2458.0"	""	"1771.4"	"1991.7"	""	"186"	"38"	"29.000"	"22.000"	"0.00161243771791135"	""	"0.0008731"	"0.009036"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQPAIVK"	"[K].nLQPAIVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"670.93677"	"1340.86626"	"1340.86659"	"-0.25"	"-0.00017"	"11/72"	"11"	"72"	"42435319.6503296"	"HCD"	"MS2"	"3.037311"	"2176.5"	"84.029"	"38.0892"	"10036"	"10036"	"10017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4258.8"	""	"3583.3"	""	"2889.8"	""	"3907.4"	""	"2823.7"	"3062.6"	""	"186"	"35"	"29.000"	"22.000"	"0.00326199242775889"	""	"0.0005564"	"0.003358"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQPAIVK"	"[K].nLQPAIVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"670.93695"	"1340.86662"	"1340.86659"	"0.02"	"0.00002"	"11/72"	"11"	"72"	"5498614.64154053"	"HCD"	"MS2"	"17.50964"	"393.0"	"99.216"	"38.3374"	"10095"	"10095"	"10071"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"717.8"	""	"600.5"	""	"546.1"	""	"625.8"	"2.9"	"575.7"	"642.9"	""	"182"	"31"	"29.000"	"22.000"	"0.00668407620022974"	""	"0.0003839"	"0.001867"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVIALK"	"[R].lPEVIALk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3B7D2"	"Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1"	"Q3B7D2"	"Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"670.94952"	"1340.89177"	"1340.89174"	"0.02"	"0.00001"	"7/56"	"7"	"56"	"2405173.01397705"	"HCD"	"MS2"	"41.94729"	"148.3"	"100.000"	"60.1286"	"19006"	"19006"	"18979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.7"	""	"177.1"	""	"212.9"	""	"256.1"	""	"270.4"	"283.5"	""	"121"	"31"	"27.000"	"20.000"	"0.00504377116694879"	""	"0.0001889"	"0.0009385"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVIALK"	"[R].lPEVIALk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3B7D2"	"Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1"	"Q3B7D2"	"Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"670.95032"	"1340.89336"	"1340.89174"	"1.20"	"0.00081"	"7/56"	"7"	"56"	"1765526.86126709"	"HCD"	"MS2"	"39.64729"	"122.8"	"100.000"	"59.8894"	"18855"	"18855"	"18825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.5"	""	"155.1"	""	"175.1"	""	"203.5"	"4.1"	"220.2"	"222.6"	""	"127"	"45"	"28.000"	"21.000"	"0.000216657498879925"	""	"0.0001859"	"0.0003678"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDAIMNFR"	"[K].vFDAIMNFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"671.36237"	"1341.71745"	"1341.71866"	"-0.90"	"-0.00060"	"7/68"	"7"	"68"	"4612613.03967285"	"HCD"	"MS2"	"5.979602"	"233.5"	"100.000"	"69.7293"	"22916"	"22916"	"22897"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"363.1"	""	"382.7"	""	"394.4"	""	"281.6"	""	"385.1"	"402.9"	""	"685"	"41"	"35.000"	"28.000"	"0.00301065212014577"	"27"	"0.0001889"	"0.0004194"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDAIMNFR"	"[K].vFDAIMNFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"671.36267"	"1341.71807"	"1341.71866"	"-0.44"	"-0.00030"	"7/68"	"7"	"68"	"4034105.5423584"	"HCD"	"MS2"	"4.419652"	"222.9"	"100.000"	"69.8533"	"22915"	"22915"	"22901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"339.6"	""	"344.2"	""	"375.6"	""	"278.9"	"1.3"	"369.6"	"399.0"	""	"671"	"38"	"35.000"	"28.000"	"0.00510143696225252"	"18"	"0.0001308"	"0.0002443"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDAIMNFR"	"[K].vFDAIMNFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"671.36298"	"1341.71868"	"1341.71866"	"0.01"	"0.00001"	"7/68"	"7"	"68"	"10644210.1935425"	"HCD"	"MS2"	"34.51709"	"383.8"	"85.530"	"69.5573"	"22795"	"22795"	"22778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"619.2"	""	"617.5"	""	"692.4"	""	"430.1"	""	"608.7"	"664.3"	""	"672"	"37"	"35.000"	"28.000"	"0.00635827455864712"	"20"	"0.0001889"	"0.0005671"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDAIMNFR"	"[K].vFDAIMNFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"671.36310"	"1341.71892"	"1341.71866"	"0.19"	"0.00013"	"7/68"	"7"	"68"	"10620990.1148682"	"HCD"	"MS2"	"37.77609"	"372.0"	"92.085"	"69.4357"	"22796"	"22796"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"594.0"	""	"593.2"	""	"656.9"	""	"452.4"	"1.7"	"569.3"	"647.3"	""	"676"	"36"	"35.000"	"28.000"	"0.00891080008408978"	"20"	"0.0001889"	"0.0003857"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSATGWK"	"[K].sFSATGWk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"671.38019"	"1341.75310"	"1341.75671"	"-2.69"	"-0.00180"	"12/64"	"12"	"64"	"2571475.44866943"	"HCD"	"MS2"	"0"	"258.1"	"100.000"	"41.9598"	"11576"	"11576"	"11557"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"374.1"	""	"332.2"	""	"365.1"	""	"402.0"	""	"472.1"	"500.5"	""	"642"	"34"	"35.000"	"28.000"	"0.0127792401747673"	"20"	"0.0001889"	"0.0006228"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSATGWK"	"[K].sFSATGWk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"671.38129"	"1341.75530"	"1341.75671"	"-1.05"	"-0.00071"	"12/64"	"12"	"64"	"2572483.96405029"	"HCD"	"MS2"	"0"	"252.7"	"100.000"	"42.1366"	"11693"	"11693"	"11673"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"386.3"	""	"315.1"	""	"380.2"	""	"369.9"	"2.9"	"437.0"	"502.1"	""	"652"	"34"	"35.000"	"28.000"	"0.0117008550694272"	"19"	"0.0001889"	"0.000865"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVFGQPAK"	"[R].hVFGQPAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"447.93915"	"1341.80289"	"1341.80433"	"-1.07"	"-0.00048"	"7/64"	"7"	"64"	"3149925.70892334"	"HCD"	"MS2"	"21.30485"	"238.6"	"100.000"	"28.1125"	"5997"	"5997"	"5969"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"376.5"	""	"330.6"	""	"355.5"	""	"341.4"	"2.0"	"435.6"	"417.3"	""	"473"	"18"	"33.000"	"26.000"	"0.405350903225742"	"14"	"0.0003839"	"0.001928"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVFGQPAK"	"[R].hVFGQPAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.40521"	"1341.80315"	"1341.80433"	"-0.88"	"-0.00059"	"12/64"	"12"	"64"	"1809402.75799561"	"HCD"	"MS2"	"0"	"138.4"	"100.000"	"27.7807"	"5826"	"5826"	"5804"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.1"	""	"185.0"	""	"185.1"	""	"216.0"	""	"235.7"	"239.8"	""	"456"	"29"	"33.000"	"26.000"	"0.0319105909546557"	"14"	"0.0002277"	"0.001282"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVFGQPAK"	"[R].hVFGQPAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.40540"	"1341.80351"	"1341.80433"	"-0.61"	"-0.00041"	"6/64"	"6"	"64"	"1829009.17590332"	"HCD"	"MS2"	"0"	"137.4"	"100.000"	"27.8737"	"5899"	"5899"	"5873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"227.1"	""	"181.6"	""	"182.3"	""	"216.8"	""	"247.3"	"248.1"	""	"485"	"31"	"33.000"	"26.000"	"0.0216128352497433"	"14"	"0.0002277"	"0.001173"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVFGQPAK"	"[R].hVFGQPAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"447.93945"	"1341.80381"	"1341.80433"	"-0.39"	"-0.00017"	"7/64"	"7"	"64"	"3388148.74121094"	"HCD"	"MS2"	"23.90281"	"250.9"	"100.000"	"28.0331"	"5930"	"5930"	"5900"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.3"	""	"356.5"	""	"359.3"	""	"366.2"	"3.0"	"482.6"	"439.0"	""	"485"	"20"	"33.000"	"26.000"	"0.263458213727139"	"14"	"0.0003839"	"0.002074"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQPTSLPK"	"[K].iQPTSLPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"671.42639"	"1341.84551"	"1341.85061"	"-3.80"	"-0.00255"	"7/70"	"7"	"70"	"7774553.45501709"	"HCD"	"MS2"	"0"	"479.9"	"100.000"	"37.9904"	"9996"	"9996"	"9969"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"581.0"	""	"556.6"	""	"608.0"	""	"948.9"	""	"979.2"	"886.6"	""	"290"	"29"	"31.000"	"24.000"	"0.0168022716642493"	"19"	"0.0005564"	"0.003362"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQPTSLPK"	"[K].iQPTSLPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"671.42682"	"1341.84636"	"1341.85061"	"-3.16"	"-0.00212"	"6/70"	"6"	"70"	"6984233.8928833"	"HCD"	"MS2"	"4.639738"	"477.7"	"100.000"	"37.9088"	"9919"	"9919"	"9895"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"611.6"	""	"601.1"	""	"623.8"	""	"930.8"	""	"938.1"	"834.2"	""	"296"	"29"	"31.000"	"24.000"	"0.0206187206835905"	"21"	"0.0006037"	"0.004792"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVWLPAVK"	"[K].aVWLPAVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.4773"	"0.0000"	"1"	"1"	"1"	"447.95935"	"1341.86350"	"1341.86586"	"-1.76"	"-0.00079"	"6/58"	"6"	"58"	"2712454.1595459"	"HCD"	"MS2"	"0"	"94.5"	"100.000"	"56.3524"	"17414"	"17414"	"17387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.9"	""	"130.9"	""	"118.5"	""	"158.3"	""	"183.5"	"192.5"	""	"240"	"44"	"30.000"	"23.000"	"0.000431699202186891"	""	"0.0001889"	"0.0005263"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVWLPAVK"	"[K].aVWLPAVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"447.95990"	"1341.86515"	"1341.86586"	"-0.53"	"-0.00024"	"8/58"	"8"	"58"	"2784202.91070557"	"HCD"	"MS2"	"12.92516"	"97.5"	"100.000"	"56.5624"	"17554"	"17554"	"17525"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.0"	""	"114.0"	""	"113.5"	""	"167.7"	""	"190.7"	"210.8"	""	"236"	"27"	"30.000"	"23.000"	"0.0239266560903511"	""	"0.0004166"	"0.002336"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVWLPAVK"	"[K].aVWLPAVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"671.43628"	"1341.86528"	"1341.86586"	"-0.43"	"-0.00029"	"5/58"	"5"	"58"	"8046649.98144531"	"HCD"	"MS2"	"8.961684"	"466.8"	"100.000"	"56.2139"	"17357"	"17357"	"17339"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"631.9"	""	"596.0"	""	"598.5"	""	"789.2"	"5.3"	"875.8"	"929.8"	""	"236"	"38"	"30.000"	"23.000"	"0.00190933444441882"	""	"0.0001889"	"0.001059"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVWLPAVK"	"[K].aVWLPAVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"671.43658"	"1341.86589"	"1341.86586"	"0.02"	"0.00001"	"7/58"	"7"	"58"	"8590904.01055908"	"HCD"	"MS2"	"5.163184"	"455.0"	"100.000"	"56.4216"	"17496"	"17496"	"17477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"615.9"	""	"563.8"	""	"585.2"	""	"752.6"	""	"910.1"	"890.8"	""	"235"	"46"	"30.000"	"23.000"	"0.00032436789810589"	""	"0.0001889"	"0.000597"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNYFAK"	"[K].eLNYFAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"671.89063"	"1342.77397"	"1342.77711"	"-2.33"	"-0.00157"	"6/56"	"6"	"56"	"7815494.54193115"	"HCD"	"MS2"	"0"	"668.1"	"100.000"	"43.4314"	"12216"	"12216"	"12202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1040.3"	""	"963.5"	""	"942.3"	""	"1045.4"	""	"1117.1"	"1217.9"	""	"649"	"27"	"35.000"	"28.000"	"0.0594586030059458"	"28"	"0.0009727"	"0.01042"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNYFAK"	"[K].eLNYFAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.1500"	"0.0000"	"1"	"1"	"1"	"671.89178"	"1342.77629"	"1342.77711"	"-0.61"	"-0.00041"	"6/56"	"6"	"56"	"2881307.63397217"	"HCD"	"MS2"	"0"	"279.7"	"100.000"	"43.1286"	"12045"	"12045"	"12039"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.6"	""	"360.7"	""	"379.2"	""	"493.6"	""	"499.9"	"554.9"	""	"633"	"20"	"35.000"	"28.000"	"0.33218017866846"	""	"0.0005564"	"0.003419"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNYFAK"	"[K].eLNYFAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"671.89185"	"1342.77641"	"1342.77711"	"-0.52"	"-0.00035"	"6/56"	"6"	"56"	"7027800.04382324"	"HCD"	"MS2"	"4.189475"	"352.1"	"53.192"	"43.4240"	"12164"	"12164"	"12143"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"548.9"	""	"500.4"	""	"542.6"	""	"519.0"	""	"558.7"	"663.8"	""	"633"	"31"	"35.000"	"28.000"	"0.0273132710368246"	"24"	"0.0006396"	"0.006323"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNYFAK"	"[K].eLNYFAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"671.89209"	"1342.77690"	"1342.77711"	"-0.15"	"-0.00010"	"6/56"	"6"	"56"	"3257388.15405273"	"HCD"	"MS2"	"0"	"303.9"	"100.000"	"43.7314"	"12338"	"12338"	"12317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"470.6"	""	"456.7"	""	"458.7"	""	"451.1"	"2.7"	"492.9"	"541.7"	""	"633"	"29"	"35.000"	"28.000"	"0.0386699592442182"	"23"	"0.0004166"	"0.002303"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVFEAFGK"	"[K].sVFEAFGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WV25"	"Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus OX=10116 GN=Puf60 PE=2 SV=2"	"Q9WV25"	"Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus OX=10116 GN=Puf60 PE=2 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"671.89221"	"1342.77715"	"1342.77711"	"0.03"	"0.00002"	"7/62"	"7"	"62"	"3374819.51953125"	"HCD"	"MS2"	"6.189182"	"276.8"	"87.805"	"52.9494"	"16044"	"16044"	"16018"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.3"	""	"298.4"	""	"334.4"	""	"486.9"	""	"581.2"	"597.1"	""	"630"	"42"	"34.000"	"27.000"	"0.00185059146046879"	"21"	"0.0001889"	"0.0004706"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVFEAFGK"	"[K].sVFEAFGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WV25"	"Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus OX=10116 GN=Puf60 PE=2 SV=2"	"Q9WV25"	"Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus OX=10116 GN=Puf60 PE=2 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"671.89258"	"1342.77788"	"1342.77711"	"0.57"	"0.00039"	"12/62"	"12"	"62"	"1634106.53161621"	"HCD"	"MS2"	"20.61774"	"171.8"	"100.000"	"53.1959"	"16195"	"16195"	"16166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.0"	""	"188.8"	""	"222.2"	""	"284.5"	"0.4"	"354.0"	"350.4"	""	"646"	"33"	"35.000"	"28.000"	"0.0144944760948402"	"18"	"0.0001889"	"0.0004401"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSYKPR"	"[R].sFSYkPR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"448.26703"	"1342.78653"	"1342.78834"	"-1.35"	"-0.00060"	"6/56"	"6"	"56"	"168392221.18457"	"HCD"	"MS2"	"5.085767"	"1436.0"	"13.323"	"30.0719"	"6762"	"6762"	"6745"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2586.2"	""	"2918.7"	""	"1770.9"	""	"2179.1"	""	"2120.1"	"1982.5"	""	"586"	"9"	"34.000"	"27.000"	"3.53075530528937"	"13"	"0.001846"	"0.02643"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSYKPR"	"[R].sFSYkPR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"671.89722"	"1342.78716"	"1342.78834"	"-0.88"	"-0.00059"	"5/56"	"5"	"56"	"7262090.67852783"	"HCD"	"MS2"	"0"	"407.8"	"100.000"	"30.0923"	"6770"	"6770"	"6745"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"749.4"	""	"831.7"	""	"492.4"	""	"609.6"	"1.4"	"589.3"	"574.6"	""	"601"	"7"	"34.000"	"27.000"	"6.29280792983194"	"14"	"0.00274"	"0.04308"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSYKPR"	"[R].sFSYkPR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"448.26727"	"1342.78727"	"1342.78834"	"-0.80"	"-0.00036"	"6/56"	"6"	"56"	"77622364.1575928"	"HCD"	"MS2"	"11.71467"	"2641.7"	"48.987"	"29.9840"	"6684"	"6684"	"6666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4814.9"	""	"5410.3"	""	"3239.7"	""	"4112.2"	""	"3860.4"	"3619.6"	""	"601"	"9"	"34.000"	"27.000"	"3.50626289926819"	"13"	"0.0008731"	"0.00893"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIHGDPK"	"[K].fAIHGDPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"448.26730"	"1342.78736"	"1342.78834"	"-0.73"	"-0.00033"	"8/56"	"8"	"56"	"52716188.5256348"	"HCD"	"MS2"	"6.583984"	"418.7"	"20.330"	"32.0731"	"7580"	"7580"	"7562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"566.4"	""	"557.7"	""	"604.2"	""	"734.6"	"3.7"	"719.9"	"778.8"	""	"601"	"16"	"34.000"	"27.000"	"0.702820590217136"	"22"	"0.0001889"	"0.001065"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIHGDPK"	"[K].fAIHGDPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"448.26755"	"1342.78809"	"1342.78834"	"-0.19"	"-0.00008"	"10/56"	"10"	"56"	"39351938.9470215"	"HCD"	"MS2"	"6.342259"	"421.1"	"25.674"	"31.9613"	"7492"	"7492"	"7474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"572.0"	""	"543.1"	""	"613.9"	""	"754.8"	"2.4"	"711.6"	"789.4"	""	"627"	"16"	"34.000"	"27.000"	"0.746857153643949"	"21"	"0.0001889"	"0.0005472"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSYKPR"	"[R].sFSYkPR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"671.89789"	"1342.78850"	"1342.78834"	"0.12"	"0.00008"	"6/56"	"6"	"56"	"7352497.6572876"	"HCD"	"MS2"	"0"	"441.2"	"100.000"	"30.0231"	"6700"	"6700"	"6682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"833.7"	""	"885.2"	""	"518.8"	""	"670.7"	"2.4"	"645.0"	"607.8"	""	"626"	"7"	"34.000"	"27.000"	"6.61522069468871"	"15"	"0.002361"	"0.03433"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIHGDPK"	"[K].fAIHGDPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"671.89813"	"1342.78899"	"1342.78834"	"0.48"	"0.00032"	"6/56"	"6"	"56"	"505993.475708008"	"HCD"	"MS2"	"0"	"49.9"	"100.000"	"32.0209"	"7517"	"7517"	"7490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.4"	""	"66.4"	""	"57.9"	""	"92.0"	"1.5"	"108.2"	"84.7"	""	"627"	"15"	"34.000"	"27.000"	"1.03570851115041"	"24"	"0.003197"	"0.06566"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IADMGHLK"	"[K].iADMGHLk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"448.26849"	"1342.79093"	"1342.79171"	"-0.58"	"-0.00026"	"6/56"	"6"	"56"	"7506856.24975586"	"HCD"	"MS2"	"32.25919"	"389.4"	"100.000"	"36.4113"	"9348"	"9348"	"9321"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"648.6"	""	"535.5"	""	"557.5"	""	"465.2"	""	"760.2"	"728.2"	""	"582"	"22"	"34.000"	"27.000"	"0.176154194553389"	"19"	"0.0001889"	"0.0003932"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAYIYK"	"[K].qVAYIYk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"3"	"671.91028"	"1342.81328"	"1342.81349"	"-0.16"	"-0.00011"	"12/62"	"12"	"62"	"11387747.5488892"	"HCD"	"MS2"	"15.00397"	"883.9"	"100.000"	"39.1454"	"10470"	"10470"	"10446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1664.4"	""	"1412.6"	""	"1374.3"	""	"1317.7"	""	"1265.8"	"1311.4"	""	"554"	"36"	"34.000"	"27.000"	"0.00762921350824673"	"22"	"0.0005564"	"0.003647"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLSYFK"	"[K].qVLSYFk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"671.91095"	"1342.81462"	"1342.81349"	"0.84"	"0.00056"	"5/60"	"5"	"60"	"2365735.71282959"	"HCD"	"MS2"	"0"	"261.6"	"100.000"	"49.7239"	"14731"	"14731"	"14703"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"338.9"	""	"360.8"	""	"336.6"	""	"458.7"	""	"516.8"	"470.8"	""	"553"	"18"	"34.000"	"27.000"	"0.441260584210956"	"21"	"0.0006037"	"0.005003"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAYIYK"	"[K].qVAYIYk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"3"	"671.91107"	"1342.81487"	"1342.81349"	"1.02"	"0.00069"	"12/62"	"12"	"62"	"10816437.1425171"	"HCD"	"MS2"	"27.1858"	"831.1"	"100.000"	"39.0454"	"10386"	"10386"	"10358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1546.1"	""	"1309.4"	""	"1266.6"	""	"1259.1"	""	"1200.7"	"1267.8"	""	"555"	"36"	"34.000"	"27.000"	"0.00773148624294762"	"21"	"0.0007793"	"0.007386"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINLVGESLR"	"[R].lINLVGESLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG49"	"Large proline-rich protein BAG6 OS=Rattus norvegicus OX=10116 GN=Bag6 PE=1 SV=2"	"Q6MG49"	"Large proline-rich protein BAG6 OS=Rattus norvegicus OX=10116 GN=Bag6 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"671.91638"	"1342.82549"	"1342.82557"	"-0.06"	"-0.00004"	"8/88"	"8"	"88"	"2034589.940979"	"HCD"	"MS2"	"0"	"115.2"	"100.000"	"61.4567"	"19548"	"19548"	"19523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.3"	""	"156.4"	""	"169.7"	""	"198.4"	"2.4"	"207.7"	"202.3"	""	"501"	"56"	"33.000"	"26.000"	"6.88347485352151E-05"	"24"	"0"	"4.987E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINLVGESLR"	"[R].lINLVGESLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG49"	"Large proline-rich protein BAG6 OS=Rattus norvegicus OX=10116 GN=Bag6 PE=1 SV=2"	"Q6MG49"	"Large proline-rich protein BAG6 OS=Rattus norvegicus OX=10116 GN=Bag6 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"671.91656"	"1342.82585"	"1342.82557"	"0.21"	"0.00014"	"8/88"	"8"	"88"	"2115524.97009277"	"HCD"	"MS2"	"9.755083"	"114.2"	"100.000"	"61.3233"	"19440"	"19440"	"19417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.1"	""	"170.6"	""	"159.9"	""	"201.4"	"1.8"	"206.2"	"186.4"	""	"499"	"56"	"33.000"	"26.000"	"6.88764175126975E-05"	"23"	"0"	"4.853E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMEMLSK"	"[K].fMEMLSk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"672.37537"	"1343.74346"	"1343.74674"	"-2.44"	"-0.00164"	"6/54"	"6"	"54"	"5195057.99700928"	"HCD"	"MS2"	"51.50911"	"365.9"	"100.000"	"58.3132"	"18269"	"18269"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"545.4"	""	"577.0"	""	"565.5"	""	"466.8"	""	"627.9"	"681.5"	""	"632"	"18"	"34.000"	"28.000"	"0.490554295146754"	"24"	"0.0006037"	"0.005649"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMEMLSK"	"[K].fMEMLSk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"672.37579"	"1343.74431"	"1343.74674"	"-1.81"	"-0.00121"	"12/54"	"12"	"54"	"4735971.81097412"	"HCD"	"MS2"	"48.64444"	"341.4"	"100.000"	"58.1580"	"18152"	"18152"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"532.0"	""	"515.1"	""	"551.8"	""	"434.3"	""	"549.2"	"650.3"	""	"651"	"19"	"35.000"	"28.000"	"0.424180786386224"	"20"	"0.0009404"	"0.009825"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTFPTEK"	"[K].yTFPTEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"672.38416"	"1343.76103"	"1343.76112"	"-0.07"	"-0.00005"	"6/56"	"6"	"56"	"15822393.6324463"	"HCD"	"MS2"	"26.58436"	"1067.9"	"83.583"	"39.2944"	"10531"	"10531"	"10510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1784.2"	""	"1532.4"	""	"1552.1"	""	"1653.9"	""	"1771.3"	"1808.7"	""	"679"	"31"	"35.000"	"28.000"	"0.0266587497950119"	"19"	"0.0006037"	"0.005934"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTFPTEK"	"[K].yTFPTEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"672.38434"	"1343.76140"	"1343.76112"	"0.21"	"0.00014"	"6/56"	"6"	"56"	"15887285.9547729"	"HCD"	"MS2"	"37.37486"	"964.0"	"80.899"	"39.1832"	"10442"	"10442"	"10422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1637.5"	""	"1375.0"	""	"1387.2"	""	"1498.4"	""	"1606.5"	"1619.8"	""	"677"	"31"	"35.000"	"28.000"	"0.026826170036764"	"19"	"0.0009404"	"0.01007"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNVIQSLLAR"	"[R].tNVIQSLLAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"672.41406"	"1343.82085"	"1343.82082"	"0.02"	"0.00002"	"8/98"	"8"	"98"	"5900424.43994141"	"HCD"	"MS2"	"3.299716"	"275.9"	"100.000"	"57.9094"	"18050"	"18050"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.2"	""	"361.7"	""	"373.0"	""	"504.2"	"0.7"	"494.3"	"557.7"	""	"679"	"54"	"35.000"	"28.000"	"0.000129670079950196"	"25"	"0"	"0.0001084"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNVIQSLLAR"	"[R].tNVIQSLLAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"672.41406"	"1343.82085"	"1343.82082"	"0.02"	"0.00002"	"8/98"	"8"	"98"	"5720886.61755371"	"HCD"	"MS2"	"19.94711"	"252.2"	"100.000"	"58.0695"	"18169"	"18169"	"18149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"308.3"	""	"330.5"	""	"357.1"	""	"454.4"	""	"446.2"	"497.1"	""	"679"	"54"	"35.000"	"28.000"	"0.000127303334262342"	"24"	"0"	"8.766E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLITTDLLAR"	"[R].vLITTDLLAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"672.42590"	"1343.84453"	"1343.84597"	"-1.07"	"-0.00072"	"9/76"	"9"	"76"	"5190860.35070801"	"HCD"	"MS2"	"18.05493"	"202.5"	"100.000"	"60.2417"	"19052"	"19052"	"19027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"291.3"	""	"296.2"	""	"289.8"	""	"333.4"	"2.4"	"347.5"	"356.1"	""	"475"	"42"	"33.000"	"26.000"	"0.0013479184378453"	"24"	"0"	"0.0001391"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPWTLAK"	"[K].gLPWTLAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"672.42615"	"1343.84502"	"1343.84513"	"-0.08"	"-0.00006"	"6/56"	"6"	"56"	"4784774.85522461"	"HCD"	"MS2"	"53.01282"	"321.9"	"100.000"	"57.2392"	"17776"	"17776"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"460.1"	""	"449.0"	""	"442.4"	""	"451.7"	""	"600.4"	"649.1"	""	"475"	"29"	"33.000"	"26.000"	"0.031817321326366"	"23"	"0.0001889"	"0.001054"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLITTDLLAR"	"[R].vLITTDLLAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"672.42627"	"1343.84526"	"1343.84597"	"-0.52"	"-0.00035"	"15/76"	"15"	"76"	"11183639.951416"	"HCD"	"MS2"	"2.939393"	"222.7"	"52.857"	"60.5391"	"19173"	"19173"	"19155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"315.7"	""	"293.7"	""	"346.2"	""	"345.5"	"3.9"	"391.6"	"412.6"	""	"475"	"46"	"33.000"	"26.000"	"0.000582993367475195"	"24"	"0"	"0.0001153"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLITTDLLAR"	"[R].vLITTDLLAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"672.42645"	"1343.84563"	"1343.84597"	"-0.25"	"-0.00017"	"9/76"	"9"	"76"	"8139381.34814453"	"HCD"	"MS2"	"2.862183"	"313.8"	"100.000"	"60.4104"	"19067"	"19067"	"19049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"435.1"	""	"450.1"	""	"488.2"	""	"481.3"	""	"544.6"	"574.7"	""	"476"	"44"	"33.000"	"26.000"	"0.000902769664237363"	"23"	"0"	"0.0001774"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPWTLAK"	"[K].gLPWTLAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"672.42651"	"1343.84575"	"1343.84513"	"0.46"	"0.00031"	"6/56"	"6"	"56"	"5117223.12878418"	"HCD"	"MS2"	"51.78401"	"347.9"	"100.000"	"57.4475"	"17915"	"17915"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"514.3"	""	"503.6"	""	"495.8"	""	"477.0"	""	"647.8"	"664.5"	""	"476"	"32"	"33.000"	"26.000"	"0.0144736130304335"	"23"	"0.0001889"	"0.00095"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPWTLAK"	"[K].gLPWTLAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"672.42664"	"1343.84599"	"1343.84513"	"0.64"	"0.00043"	"6/56"	"6"	"56"	"1406916.44244385"	"HCD"	"MS2"	"18.08476"	"107.2"	"100.000"	"57.5642"	"17909"	"17909"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.1"	""	"157.2"	""	"157.3"	""	"149.2"	"2.2"	"193.1"	"198.9"	""	"476"	"34"	"33.000"	"26.000"	"0.00896555041581703"	"25"	"0.0001889"	"0.0004481"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPWTLAK"	"[K].gLPWTLAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"672.42664"	"1343.84599"	"1343.84513"	"0.64"	"0.00043"	"6/56"	"6"	"56"	"1272824.76470947"	"HCD"	"MS2"	"9.439354"	"96.2"	"100.000"	"57.7813"	"18052"	"18052"	"18021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.8"	""	"135.0"	""	"157.1"	""	"137.9"	"4.5"	"162.7"	"181.9"	""	"476"	"38"	"33.000"	"26.000"	"0.0036861835530117"	""	"0.0001889"	"0.0004331"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLITTDLLAR"	"[R].vLITTDLLAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"672.42731"	"1343.84734"	"1343.84597"	"1.02"	"0.00069"	"9/76"	"9"	"76"	"6651065.83996582"	"HCD"	"MS2"	"16.454"	"273.3"	"100.000"	"60.1061"	"18943"	"18943"	"18921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.5"	""	"411.7"	""	"406.4"	""	"430.9"	"1.4"	"450.4"	"497.9"	""	"458"	"42"	"33.000"	"26.000"	"0.00149566896556271"	"23"	"0"	"9.923E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGIDINK"	"[R].iIGIDINk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2;Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2; Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"672.43542"	"1343.86357"	"1343.86626"	"-2.00"	"-0.00134"	"7/58"	"7"	"58"	"3201128.74761963"	"HCD"	"MS2"	"0"	"257.8"	"100.000"	"53.6676"	"16377"	"16377"	"16369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.8"	""	"319.4"	""	"332.6"	""	"431.9"	""	"492.8"	"542.8"	""	"325"	"39"	"32.000"	"25.000"	"0.00225347822191682"	""	"0.0001889"	"0.0005344"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNIPTIK"	"[R].iSNIPTIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"448.62628"	"1343.86429"	"1343.86626"	"-1.46"	"-0.00066"	"9/74"	"9"	"74"	"4364680.50970459"	"HCD"	"MS2"	"7.302178"	"180.0"	"100.000"	"45.0274"	"12866"	"12866"	"12843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.4"	""	"225.3"	""	"251.1"	""	"309.3"	""	"331.1"	"348.0"	""	"322"	"22"	"32.000"	"25.000"	"0.104912171443796"	"20"	"0.0006037"	"0.004318"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGIDINK"	"[R].iIGIDINk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2;Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2; Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.2927"	"0.0000"	"1"	"1"	"1"	"672.43579"	"1343.86431"	"1343.86626"	"-1.45"	"-0.00098"	"7/58"	"7"	"58"	"5981611.61053467"	"HCD"	"MS2"	"15.92333"	"455.8"	"100.000"	"53.6950"	"16331"	"16331"	"16318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"568.2"	""	"523.6"	""	"596.5"	""	"805.5"	""	"865.5"	"967.9"	""	"322"	"41"	"32.000"	"25.000"	"0.00130564730314468"	""	"0.0001889"	"0.0007538"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNIPTIK"	"[R].iSNIPTIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"448.62631"	"1343.86438"	"1343.86626"	"-1.39"	"-0.00062"	"8/74"	"8"	"74"	"6584921.51092529"	"HCD"	"MS2"	"0"	"252.4"	"100.000"	"44.5159"	"12608"	"12608"	"12590"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"361.5"	""	"327.3"	""	"334.8"	""	"437.4"	""	"448.2"	"484.0"	""	"322"	"27"	"32.000"	"25.000"	"0.0330237110790916"	"22"	"0.00103"	"0.0127"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGIDINK"	"[R].iIGIDINk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2;Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2; Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"672.43585"	"1343.86443"	"1343.86626"	"-1.36"	"-0.00092"	"7/58"	"7"	"58"	"5659011.31622314"	"HCD"	"MS2"	"8.349398"	"451.0"	"100.000"	"53.9678"	"16494"	"16494"	"16477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"569.4"	""	"533.6"	""	"612.8"	""	"730.3"	""	"896.2"	"950.4"	""	"322"	"33"	"32.000"	"25.000"	"0.00884760806910774"	""	"0.0002277"	"0.001219"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNIPTIK"	"[R].iSNIPTIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"448.62646"	"1343.86484"	"1343.86626"	"-1.05"	"-0.00047"	"9/74"	"9"	"74"	"6136642.02990723"	"HCD"	"MS2"	"29.20374"	"252.5"	"100.000"	"44.7222"	"12742"	"12742"	"12721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.9"	""	"329.4"	""	"333.8"	""	"441.9"	""	"425.3"	"488.2"	""	"322"	"23"	"32.000"	"25.000"	"0.0901209738407127"	"20"	"0.0008731"	"0.008614"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGIDINK"	"[R].iIGIDINk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2;Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2; Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"672.43616"	"1343.86504"	"1343.86626"	"-0.91"	"-0.00061"	"12/58"	"12"	"58"	"2120604.01715088"	"HCD"	"MS2"	"0"	"170.3"	"100.000"	"53.9881"	"16447"	"16447"	"16434"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"201.0"	""	"194.5"	""	"228.2"	""	"274.6"	""	"348.9"	"374.6"	""	"322"	"32"	"32.000"	"25.000"	"0.00956810375371072"	""	"0.0001889"	"0.0005693"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGIDINK"	"[R].iIGIDINk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2;Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2; Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"672.43622"	"1343.86516"	"1343.86626"	"-0.82"	"-0.00055"	"7/58"	"7"	"58"	"2190762.57098389"	"HCD"	"MS2"	"0"	"192.7"	"100.000"	"53.3997"	"16218"	"16218"	"16210"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.5"	""	"223.2"	""	"240.4"	""	"325.3"	""	"358.4"	"429.6"	""	"322"	"29"	"32.000"	"25.000"	"0.018959456173685"	""	"0.0001889"	"0.0007947"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNIPTIK"	"[R].iSNIPTIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"672.43622"	"1343.86516"	"1343.86626"	"-0.82"	"-0.00055"	"7/74"	"7"	"74"	"32103740.3282471"	"HCD"	"MS2"	"0"	"660.4"	"34.629"	"44.8277"	"12785"	"12785"	"12771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"964.3"	""	"850.0"	""	"870.6"	""	"1130.8"	""	"1144.8"	"1298.4"	""	"322"	"44"	"32.000"	"25.000"	"0.000605098220904395"	"25"	"0.0004166"	"0.002456"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGIDINK"	"[R].iIGIDINk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2;Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2; Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"1"	"672.43628"	"1343.86528"	"1343.86626"	"-0.73"	"-0.00049"	"6/58"	"6"	"58"	"1171178.93249512"	"HCD"	"MS2"	"33.17207"	"92.1"	"100.000"	"54.3114"	"16633"	"16633"	"16605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.2"	""	"118.5"	""	"127.4"	""	"154.9"	"0.9"	"168.7"	"185.9"	""	"322"	"24"	"32.000"	"25.000"	"0.0583211227450884"	""	"0.0002277"	"0.00112"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNIPTIK"	"[R].iSNIPTIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"672.43640"	"1343.86553"	"1343.86626"	"-0.54"	"-0.00037"	"6/74"	"6"	"74"	"5102704.51196289"	"HCD"	"MS2"	"22.93386"	"362.5"	"100.000"	"44.5411"	"12669"	"12669"	"12652"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"525.1"	""	"484.9"	""	"526.4"	""	"611.6"	""	"627.7"	"662.8"	""	"322"	"31"	"32.000"	"25.000"	"0.0128773315056131"	""	"0.0001889"	"0.0007992"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNIPTIK"	"[R].iSNIPTIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"672.43652"	"1343.86577"	"1343.86626"	"-0.36"	"-0.00024"	"7/74"	"7"	"74"	"29500839.0401611"	"HCD"	"MS2"	"0"	"754.7"	"43.368"	"44.5752"	"12632"	"12632"	"12616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1042.1"	""	"943.9"	""	"1052.1"	""	"1324.0"	""	"1329.2"	"1469.3"	""	"322"	"44"	"32.000"	"25.000"	"0.000603706533615228"	""	"0.000523"	"0.002944"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNIPTIK"	"[R].iSNIPTIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"672.43695"	"1343.86662"	"1343.86626"	"0.27"	"0.00018"	"8/74"	"8"	"74"	"4692937.98638916"	"HCD"	"MS2"	"26.43257"	"351.3"	"100.000"	"44.2819"	"12514"	"12514"	"12486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"510.5"	""	"475.5"	""	"498.1"	""	"596.0"	""	"607.2"	"641.9"	""	"317"	"14"	"32.000"	"25.000"	"0.676128537300525"	""	"0.0002277"	"0.001204"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLLIQLK"	"[K].tGLLIQLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JLH5"	"CDK5 regulatory subunit-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cdk5rap2 PE=1 SV=2"	"Q9JLH5"	"CDK5 regulatory subunit-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cdk5rap2 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"672.45490"	"1343.90251"	"1343.90264"	"-0.10"	"-0.00007"	"5/60"	"5"	"60"	"1881306.60675049"	"HCD"	"MS2"	"21.85778"	"123.8"	"100.000"	"61.3346"	"19498"	"19498"	"19475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.1"	""	"138.7"	""	"139.1"	""	"241.9"	""	"248.2"	"263.3"	""	"207"	"15"	"30.000"	"23.000"	"0.349897105473191"	"19"	"0.007595"	"0.2988"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFDFPFTR"	"[R].wFDFPFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"672.85040"	"1344.69353"	"1344.69382"	"-0.22"	"-0.00015"	"7/64"	"7"	"64"	"1406303.19610596"	"HCD"	"MS2"	"18.96209"	"57.3"	"100.000"	"77.5825"	"26110"	"26110"	"26085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.2"	""	"69.0"	""	"72.9"	""	"100.7"	"1.8"	"102.8"	"131.6"	""	"603"	"12"	"34.000"	"27.000"	"2.12954742610283"	"17"	"0.00103"	"0.0127"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFDFPFTR"	"[R].wFDFPFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"672.85077"	"1344.69426"	"1344.69382"	"0.33"	"0.00022"	"5/64"	"5"	"64"	"1282062.75628662"	"HCD"	"MS2"	"28.51707"	"52.6"	"100.000"	"77.6344"	"26080"	"26080"	"26057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.4"	""	"71.2"	""	"68.1"	""	"92.6"	"0.9"	"101.1"	"105.9"	""	"602"	"12"	"34.000"	"27.000"	"1.70830926227972"	"16"	"0.0009404"	"0.009669"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDQEK"	"[K].fYGDQEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"672.86346"	"1344.71965"	"1344.71999"	"-0.25"	"-0.00017"	"6/56"	"6"	"56"	"1483707.13360596"	"HCD"	"MS2"	"0"	"152.4"	"100.000"	"33.6211"	"8164"	"8164"	"8147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"208.3"	""	"156.7"	""	"185.2"	""	"247.8"	""	"319.1"	"330.9"	""	"706"	"20"	"35.000"	"28.000"	"0.38794906131968"	"19"	"0.0002277"	"0.001285"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDQEK"	"[K].fYGDQEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"672.86371"	"1344.72014"	"1344.71999"	"0.11"	"0.00008"	"12/56"	"12"	"56"	"1456163.22503662"	"HCD"	"MS2"	"0"	"148.9"	"100.000"	"33.6739"	"8229"	"8229"	"8210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.4"	""	"139.9"	""	"193.0"	""	"238.2"	""	"302.8"	"310.9"	""	"698"	"22"	"35.000"	"28.000"	"0.240339651424152"	"19"	"0.0002277"	"0.001265"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFAVGMFK"	"[K].sFAVGMFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"672.89032"	"1344.77336"	"1344.77500"	"-1.22"	"-0.00082"	"7/56"	"7"	"56"	"2251342.20672607"	"HCD"	"MS2"	"0"	"205.1"	"100.000"	"53.3379"	"16250"	"16250"	"16242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.9"	""	"287.1"	""	"305.5"	""	"274.0"	"0.3"	"367.4"	"379.2"	""	"828"	"39"	"36.000"	"29.000"	"0.00485288881336926"	"16"	"0.0001889"	"0.0005989"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VENFIHK"	"[K].vENFIHk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"448.93936"	"1344.80353"	"1344.80399"	"-0.34"	"-0.00015"	"5/56"	"5"	"56"	"20612274.5063477"	"HCD"	"MS2"	"5.492081"	"395.9"	"53.931"	"37.5181"	"9802"	"9802"	"9777"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"560.0"	"2.8"	"461.9"	""	"534.4"	""	"656.8"	"3.0"	"748.2"	"786.5"	""	"795"	"24"	"35.000"	"29.000"	"0.155001939703926"	"22"	"0.0006396"	"0.006382"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VENFIHK"	"[K].vENFIHk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"448.93991"	"1344.80518"	"1344.80399"	"0.88"	"0.00040"	"6/56"	"6"	"56"	"15901088.7169189"	"HCD"	"MS2"	"6.465189"	"613.0"	"99.739"	"37.4317"	"9723"	"9723"	"9704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"851.7"	""	"752.7"	""	"838.0"	""	"986.5"	""	"1185.8"	"1204.4"	""	"802"	"32"	"36.000"	"29.000"	"0.023776305515658"	"22"	"0.0003839"	"0.001654"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLQDRK"	"[R].vQLQDRk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z0J5"	"Thioredoxin reductase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Txnrd2 PE=1 SV=3"	"Q9Z0J5"	"Thioredoxin reductase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Txnrd2 PE=1 SV=3"	"1"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"672.91583"	"1344.82439"	"1344.83635"	"-8.90"	"-0.00598"	"6/58"	"6"	"58"	"2464197.25067139"	"HCD"	"MS2"	"0"	"198.8"	"100.000"	"36.8764"	"9539"	"9539"	"9510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.2"	""	"237.0"	""	"224.2"	""	"428.2"	"5.6"	"398.9"	"364.9"	""	"640"	"32"	"35.000"	"28.000"	"0.0223949438720727"	""	"0.007535"	"0.2913"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFISHVK"	"[R].rFISHVk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"0.3846"	"0.0000"	"1"	"1"	"1"	"448.95471"	"1344.84958"	"1344.85161"	"-1.51"	"-0.00068"	"6/60"	"6"	"60"	"19660965.2386475"	"HCD"	"MS2"	"72.68085"	"638.0"	"52.802"	"26.0938"	"5141"	"5141"	"5126"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1166.0"	""	"1093.3"	""	"846.4"	""	"983.9"	""	"1005.6"	"933.9"	""	"547"	"13"	"34.000"	"27.000"	"1.27044927773422"	"22"	"0.0003839"	"0.001709"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFISHVK"	"[R].rFISHVk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"672.92871"	"1344.85015"	"1344.85161"	"-1.09"	"-0.00073"	"6/60"	"6"	"60"	"817229.191711426"	"HCD"	"MS2"	"32.7785"	"53.7"	"100.000"	"26.2207"	"5230"	"5230"	"5205"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.4"	""	"93.9"	""	"73.6"	""	"76.1"	"0.4"	"72.5"	"81.7"	""	"551"	"12"	"34.000"	"27.000"	"1.94590486199446"	"17"	"0.006033"	"0.2107"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFISHVK"	"[R].rFISHVk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"0.2727"	"0.0000"	"1"	"1"	"1"	"448.95520"	"1344.85105"	"1344.85161"	"-0.42"	"-0.00019"	"5/60"	"5"	"60"	"17898420.135498"	"HCD"	"MS2"	"37.75237"	"638.5"	"62.346"	"26.2001"	"5221"	"5221"	"5205"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1208.7"	""	"1100.1"	""	"862.8"	""	"968.0"	""	"952.1"	"935.5"	""	"538"	"11"	"34.000"	"27.000"	"2.18148524562683"	"22"	"0.0003571"	"0.001538"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFISHVK"	"[R].rFISHVk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"672.92920"	"1344.85112"	"1344.85161"	"-0.36"	"-0.00024"	"6/60"	"6"	"60"	"725049.984008789"	"HCD"	"MS2"	"20.18604"	"49.6"	"100.000"	"26.1442"	"5162"	"5162"	"5138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.5"	""	"91.7"	""	"62.2"	""	"73.0"	""	"75.5"	"75.9"	""	"538"	"10"	"34.000"	"27.000"	"2.62876812437113"	"15"	"0.007783"	"0.3085"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGNLTVVGK"	"[R].vGNLTVVGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"672.93353"	"1344.85979"	"1344.86151"	"-1.28"	"-0.00086"	"7/76"	"7"	"76"	"6535913.66125488"	"HCD"	"MS2"	"0"	"348.4"	"73.405"	"41.3297"	"11363"	"11363"	"11341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"568.6"	""	"506.5"	""	"526.1"	""	"475.2"	"6.7"	"542.3"	"670.2"	""	"430"	"43"	"33.000"	"26.000"	"0.00115461836219604"	""	"0.0001308"	"0.0002756"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGNLTVVGK"	"[R].vGNLTVVGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"672.93359"	"1344.85991"	"1344.86151"	"-1.19"	"-0.00080"	"8/76"	"8"	"76"	"5563712.88549805"	"HCD"	"MS2"	"0"	"335.6"	"74.865"	"41.1532"	"11247"	"11247"	"11221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"540.2"	""	"489.3"	""	"494.1"	""	"430.9"	"0.4"	"535.8"	"684.9"	""	"430"	"56"	"33.000"	"26.000"	"5.86730223303729E-05"	""	"0"	"0.0001806"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVSIGIVGK"	"[K].nVSIGIVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"672.93390"	"1344.86052"	"1344.86151"	"-0.73"	"-0.00049"	"8/80"	"8"	"80"	"14157787.2507324"	"HCD"	"MS2"	"11.40059"	"904.5"	"100.000"	"42.5452"	"11814"	"11814"	"11788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1298.0"	""	"1293.5"	""	"1277.4"	""	"1301.4"	"3.2"	"1672.0"	"1724.5"	""	"429"	"45"	"33.000"	"26.000"	"0.000640364571757902"	"23"	"0.0001889"	"0.0004543"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVEWLK"	"[R].vLVEWLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q04631"	"Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1"	"Q04631"	"Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"672.93744"	"1344.86760"	"1344.86553"	"1.54"	"0.00104"	"12/48"	"12"	"48"	"1648902.27575684"	"HCD"	"MS2"	"0"	"126.5"	"100.000"	"67.1435"	"21816"	"21816"	"21798"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.9"	""	"178.1"	""	"182.5"	""	"201.8"	"3.1"	"230.5"	"243.1"	""	"379"	"30"	"32.000"	"25.000"	"0.0179311942078818"	"23"	"0.0002277"	"0.00131"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLMYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"449.25748"	"1345.75788"	"1345.75902"	"-0.85"	"-0.00038"	"5/48"	"5"	"48"	"3756524.73071289"	"HCD"	"MS2"	"6.741116"	"158.8"	"100.000"	"55.9489"	"17249"	"17249"	"17227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.9"	""	"200.7"	""	"256.8"	""	"180.9"	""	"311.8"	"325.4"	""	"875"	"22"	"36.000"	"29.000"	"0.251175952215706"	"14"	"0.001846"	"0.02573"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLMYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"449.25760"	"1345.75824"	"1345.75902"	"-0.57"	"-0.00026"	"9/48"	"9"	"48"	"11709204.2078247"	"HCD"	"MS2"	"57.63957"	"466.7"	"100.000"	"55.6404"	"17123"	"17123"	"17099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"703.1"	""	"688.9"	""	"720.6"	""	"518.5"	""	"903.2"	"892.7"	""	"854"	"16"	"36.000"	"29.000"	"1.06274207490658"	"15"	"0.00423"	"0.1083"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLMYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"449.25760"	"1345.75824"	"1345.75902"	"-0.57"	"-0.00026"	"5/48"	"5"	"48"	"12917009.5904541"	"HCD"	"MS2"	"24.57701"	"483.4"	"100.000"	"55.8465"	"17261"	"17261"	"17237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"744.6"	""	"730.8"	""	"733.6"	""	"559.1"	""	"911.0"	"904.0"	""	"854"	"19"	"36.000"	"29.000"	"0.483534955101583"	"15"	"0.001686"	"0.02282"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLMYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.38300"	"1345.75871"	"1345.75902"	"-0.22"	"-0.00015"	"12/48"	"12"	"48"	"3996646.84759521"	"HCD"	"MS2"	"18.461"	"336.5"	"100.000"	"56.4264"	"17498"	"17498"	"17477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"509.2"	""	"488.0"	""	"508.2"	""	"413.5"	"8.7"	"630.4"	"629.5"	""	"854"	"32"	"36.000"	"29.000"	"0.025670118590536"	"15"	"0.0003839"	"0.002006"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLMYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"449.25778"	"1345.75879"	"1345.75902"	"-0.17"	"-0.00007"	"5/48"	"5"	"48"	"3312408.42907715"	"HCD"	"MS2"	"4.882997"	"143.1"	"100.000"	"56.1687"	"17393"	"17393"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"201.2"	""	"195.1"	""	"221.1"	""	"167.9"	"0.1"	"283.5"	"288.4"	""	"854"	"25"	"36.000"	"29.000"	"0.138812275983581"	"15"	"0.0006396"	"0.006297"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLMYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"673.38330"	"1345.75932"	"1345.75902"	"0.23"	"0.00015"	"12/48"	"12"	"48"	"69909963.1811523"	"HCD"	"MS2"	"0.3758691"	"529.0"	"8.689"	"56.1019"	"17366"	"17366"	"17349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"755.3"	""	"753.5"	""	"855.2"	""	"529.5"	""	"1033.3"	"1089.9"	""	"829"	"33"	"36.000"	"29.000"	"0.0191216134655277"	"17"	"0.002297"	"0.03348"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLMYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.38336"	"1345.75945"	"1345.75902"	"0.32"	"0.00022"	"12/48"	"12"	"48"	"36310720.1339111"	"HCD"	"MS2"	"6.888793"	"1204.3"	"38.718"	"55.5873"	"17101"	"17101"	"17083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1873.4"	""	"1781.6"	""	"1911.4"	""	"1389.1"	"21.0"	"2206.3"	"2220.7"	""	"831"	"32"	"36.000"	"29.000"	"0.027705821260826"	"15"	"0.001587"	"0.02148"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLMYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"673.38348"	"1345.75969"	"1345.75902"	"0.50"	"0.00034"	"12/48"	"12"	"48"	"32082468.3115845"	"HCD"	"MS2"	"2.325384"	"1968.8"	"75.846"	"55.7889"	"17238"	"17238"	"17221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3062.9"	""	"2962.3"	""	"3036.4"	""	"2293.0"	"2.1"	"3659.3"	"3627.6"	""	"831"	"30"	"36.000"	"29.000"	"0.038776716198115"	"20"	"0.00103"	"0.01258"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLMYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"673.38391"	"1345.76055"	"1345.75902"	"1.14"	"0.00076"	"12/48"	"12"	"48"	"74524237.0600586"	"HCD"	"MS2"	"0.310845"	"571.0"	"8.737"	"55.8959"	"17228"	"17228"	"17211"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"803.0"	""	"780.3"	""	"920.6"	""	"587.8"	""	"1119.3"	"1209.3"	""	"823"	"32"	"36.000"	"29.000"	"0.0262645424567411"	"17"	"0.003107"	"0.06225"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LCVLHEK"	"[R].lcVLHEk.[T]"	"N-Term(TMT6plex); C2(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"449.26199"	"1345.77143"	"1345.77362"	"-1.63"	"-0.00073"	"6/48"	"6"	"48"	"71428356.4230957"	"HCD"	"MS2"	"10.64245"	"1281.3"	"47.438"	"38.3434"	"10141"	"10141"	"10113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2110.7"	""	"2001.8"	""	"1622.5"	""	"1813.8"	"3.2"	"2401.1"	"2179.1"	""	"802"	"33"	"36.000"	"29.000"	"0.0224980238389021"	"23"	"0.0001889"	"0.0005456"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LCVLHEK"	"[R].lcVLHEk.[T]"	"N-Term(TMT6plex); C2(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"673.38989"	"1345.77251"	"1345.77362"	"-0.83"	"-0.00056"	"6/48"	"6"	"48"	"3348323.30895996"	"HCD"	"MS2"	"0"	"254.8"	"100.000"	"38.4281"	"10176"	"10176"	"10145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"403.9"	""	"374.2"	""	"342.9"	""	"368.4"	"3.9"	"467.1"	"451.9"	""	"808"	"27"	"36.000"	"29.000"	"0.0755755584707784"	"21"	"0.0003839"	"0.001862"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LCVLHEK"	"[R].lcVLHEk.[T]"	"N-Term(TMT6plex); C2(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"449.26242"	"1345.77271"	"1345.77362"	"-0.68"	"-0.00030"	"6/48"	"6"	"48"	"81298028.9863281"	"HCD"	"MS2"	"6.605625"	"1212.9"	"42.762"	"38.2481"	"10058"	"10058"	"10039"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2000.4"	""	"1914.9"	""	"1563.7"	""	"1696.1"	""	"2268.3"	"2039.9"	""	"808"	"34"	"36.000"	"29.000"	"0.0153950592651084"	"24"	"0.0001889"	"0.0005815"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LCVLHEK"	"[R].lcVLHEk.[T]"	"N-Term(TMT6plex); C2(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"449.26245"	"1345.77280"	"1345.77362"	"-0.61"	"-0.00027"	"7/48"	"7"	"48"	"12809591.2705688"	"HCD"	"MS2"	"13.88543"	"408.1"	"75.171"	"38.6319"	"10259"	"10259"	"10241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"617.7"	""	"623.3"	""	"541.9"	""	"554.0"	""	"790.0"	"744.0"	""	"808"	"29"	"36.000"	"29.000"	"0.0556392625433155"	"23"	"0.0001889"	"0.0005189"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LCVLHEK"	"[R].lcVLHEk.[T]"	"N-Term(TMT6plex); C2(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"449.26273"	"1345.77362"	"1345.77362"	"0.00"	"0.00000"	"6/48"	"6"	"48"	"9001481.30596924"	"HCD"	"MS2"	"14.87327"	"392.8"	"100.000"	"38.5666"	"10189"	"10189"	"10167"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"590.6"	""	"603.5"	""	"481.9"	""	"558.9"	""	"775.4"	"715.1"	""	"849"	"34"	"36.000"	"29.000"	"0.01621353429716"	"24"	"0.0001889"	"0.0009222"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LCVLHEK"	"[R].lcVLHEk.[T]"	"N-Term(TMT6plex); C2(Methylthio); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"673.39050"	"1345.77373"	"1345.77362"	"0.08"	"0.00005"	"6/48"	"6"	"48"	"3566861.50878906"	"HCD"	"MS2"	"8.839511"	"278.7"	"100.000"	"38.3122"	"10085"	"10085"	"10055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"451.3"	""	"417.1"	""	"357.7"	""	"397.7"	"0.1"	"527.2"	"488.1"	""	"849"	"30"	"36.000"	"29.000"	"0.0461187677225444"	"23"	"0.0003839"	"0.001779"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEIFFFK"	"[R].gEIFFFk.[DA]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P33436"	"72 kDa type IV collagenase OS=Rattus norvegicus OX=10116 GN=Mmp2 PE=1 SV=2"	"P33436"	"72 kDa type IV collagenase OS=Rattus norvegicus OX=10116 GN=Mmp2 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"673.39813"	"1345.78899"	"1345.79203"	"-2.26"	"-0.00152"	"4/48"	"4"	"48"	"1462374.63824463"	"HCD"	"MS2"	"6.92809"	"108.3"	"100.000"	"64.8612"	"20938"	"20938"	"20915"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.9"	""	"157.8"	""	"155.7"	""	"151.5"	"0.8"	"215.4"	"203.8"	""	"824"	"14"	"36.000"	"29.000"	"1.59550149707706"	"20"	"0.0004166"	"0.002486"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELFFFK"	"[R].gELFFFk.[DA]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	""	""	"Q499S5"	"Stromelysin-3 OS=Rattus norvegicus OX=10116 GN=Mmp11 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"673.39813"	"1345.78899"	"1345.79203"	"-2.26"	"-0.00152"	"4/48"	"4"	"48"	"1462374.63824463"	"HCD"	"MS2"	"6.92809"	"108.3"	"100.000"	"64.8612"	"20938"	"20938"	"20915"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.9"	""	"157.8"	""	"155.7"	""	"151.5"	"0.8"	"215.4"	"203.8"	""	"824"	"14"	"36.000"	"29.000"	"1.59550149707706"	"20"	"0.0004166"	"0.002486"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQGWQGLK"	"[K].aQGWQGLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"673.40222"	"1345.79717"	"1345.79924"	"-1.54"	"-0.00104"	"7/70"	"7"	"70"	"2299501.60302734"	"HCD"	"MS2"	"11.0406"	"204.6"	"100.000"	"38.5758"	"10193"	"10193"	"10167"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.6"	""	"259.1"	""	"289.4"	""	"302.6"	""	"382.5"	"396.7"	""	"767"	"38"	"35.000"	"28.000"	"0.00571169973302136"	"22"	"0.0001859"	"0.0003486"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NWIGVGNK"	"[R].nWIGVGNk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"4"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"A4KWA8; Q925N7; A4KWA5; Q0H8B9"	"C-type lectin domain family 2 member D6 OS=Rattus norvegicus OX=10116 GN=Clec2d6 PE=2 SV=1; C-type lectin domain family 2 member D5 OS=Rattus norvegicus OX=10116 GN=Ocil PE=2 SV=1; C-type lectin domain family 2 member D2 OS=Rattus norvegicus OX=10116 GN=Clec2d2 PE=2 SV=1; C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"673.40289"	"1345.79851"	"1345.79924"	"-0.54"	"-0.00037"	"11/72"	"11"	"72"	"10830445.9610596"	"HCD"	"MS2"	"17.78722"	"841.9"	"100.000"	"40.9490"	"11163"	"11163"	"11141"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"872.8"	""	"996.7"	""	"939.5"	""	"1481.4"	""	"1761.4"	"1956.6"	""	"794"	"33"	"35.000"	"28.000"	"0.0190016146652087"	"19"	"0.0001889"	"0.0008494"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQGWQGLK"	"[K].aQGWQGLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"673.40295"	"1345.79863"	"1345.79924"	"-0.45"	"-0.00030"	"6/70"	"6"	"70"	"2541292.75268555"	"HCD"	"MS2"	"62.19159"	"232.5"	"100.000"	"38.6204"	"10255"	"10255"	"10225"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"360.0"	""	"311.5"	""	"316.1"	""	"352.7"	""	"444.8"	"423.6"	""	"793"	"23"	"35.000"	"28.000"	"0.217391816591119"	"16"	"0.0001889"	"0.0004929"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NWIGVGNK"	"[R].nWIGVGNk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"4"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"A4KWA8; Q925N7; A4KWA5; Q0H8B9"	"C-type lectin domain family 2 member D6 OS=Rattus norvegicus OX=10116 GN=Clec2d6 PE=2 SV=1; C-type lectin domain family 2 member D5 OS=Rattus norvegicus OX=10116 GN=Ocil PE=2 SV=1; C-type lectin domain family 2 member D2 OS=Rattus norvegicus OX=10116 GN=Clec2d2 PE=2 SV=1; C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"673.40326"	"1345.79924"	"1345.79924"	"0.00"	"0.00000"	"11/72"	"11"	"72"	"9088214.73303223"	"HCD"	"MS2"	"34.07566"	"667.7"	"100.000"	"41.1072"	"11272"	"11272"	"11245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"699.7"	""	"794.3"	""	"759.1"	""	"1184.3"	""	"1370.4"	"1542.9"	""	"787"	"33"	"35.000"	"28.000"	"0.0188340941328958"	"22"	"0.0001889"	"0.0007198"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NWIGVGNK"	"[R].nWIGVGNk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"4"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"A4KWA8; Q925N7; A4KWA5; Q0H8B9"	"C-type lectin domain family 2 member D6 OS=Rattus norvegicus OX=10116 GN=Clec2d6 PE=2 SV=1; C-type lectin domain family 2 member D5 OS=Rattus norvegicus OX=10116 GN=Ocil PE=2 SV=1; C-type lectin domain family 2 member D2 OS=Rattus norvegicus OX=10116 GN=Clec2d2 PE=2 SV=1; C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"449.27139"	"1345.79963"	"1345.79924"	"0.29"	"0.00013"	"8/72"	"8"	"72"	"6166039.91241455"	"HCD"	"MS2"	"23.31059"	"272.6"	"100.000"	"41.1921"	"11307"	"11307"	"11277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"323.2"	""	"337.8"	""	"356.7"	""	"461.3"	"2.5"	"547.9"	"557.9"	""	"779"	"22"	"35.000"	"28.000"	"0.268848403595774"	"21"	"0.0001889"	"0.0008198"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISKPEGR"	"[K].tISkPEGR.[T]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"449.27768"	"1345.81849"	"1345.82037"	"-1.40"	"-0.00063"	"5/74"	"5"	"74"	"9975014.04180908"	"HCD"	"MS2"	"31.30523"	"735.9"	"100.000"	"25.8244"	"5070"	"5070"	"5047"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1292.0"	""	"1042.4"	""	"1024.4"	""	"1068.9"	""	"1159.6"	"1377.3"	""	"620"	"2"	"34.000"	"27.000"	"17.6344408561591"	"13"	"0.0006037"	"0.004938"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISKPEGR"	"[K].tISkPEGR.[T]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"7"	"449.27798"	"1345.81940"	"1345.82037"	"-0.72"	"-0.00032"	"5/74"	"5"	"74"	"6253018.22253418"	"HCD"	"MS2"	"10.17463"	"538.7"	"100.000"	"25.8074"	"5028"	"5028"	"5003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"886.9"	""	"742.2"	""	"700.8"	""	"800.4"	"2.3"	"908.7"	"1059.1"	""	"731"	"1"	"35.000"	"28.000"	"29.9838489452549"	"13"	"0.0006037"	"0.003911"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLLDNVK"	"[R].wLLDNVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63060"	"Glycerol kinase OS=Rattus norvegicus OX=10116 GN=Gk PE=2 SV=1"	"Q63060"	"Glycerol kinase OS=Rattus norvegicus OX=10116 GN=Gk PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"673.41577"	"1345.82427"	"1345.82439"	"-0.09"	"-0.00006"	"12/52"	"12"	"52"	"2555665.27600098"	"HCD"	"MS2"	"52.91047"	"170.4"	"100.000"	"57.8527"	"18081"	"18081"	"18053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.2"	""	"228.7"	""	"242.9"	""	"274.1"	""	"333.3"	"310.2"	""	"709"	"13"	"35.000"	"28.000"	"1.93471161756855"	"17"	"0.0006037"	"0.004128"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLLDNVK"	"[R].wLLDNVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63060"	"Glycerol kinase OS=Rattus norvegicus OX=10116 GN=Gk PE=2 SV=1"	"Q63060"	"Glycerol kinase OS=Rattus norvegicus OX=10116 GN=Gk PE=2 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"673.41614"	"1345.82500"	"1345.82439"	"0.45"	"0.00030"	"6/52"	"6"	"52"	"2041397.4397583"	"HCD"	"MS2"	"19.59194"	"139.1"	"100.000"	"57.7160"	"17971"	"17971"	"17947"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.4"	""	"183.8"	""	"187.1"	""	"213.6"	""	"263.9"	"267.7"	""	"716"	"9"	"35.000"	"28.000"	"4.353945882314"	"17"	"0.0006037"	"0.005155"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVSIGIVGK"	"[K].nVSIGIVGk.[D]"	"N-Term(TMT6plex); N1(Deamidated); K9(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"673.41620"	"1345.82512"	"1345.84552"	"-15.16"	"-0.01020"	"7/80"	"7"	"80"	"15217617.2312622"	"HCD"	"MS2"	"44.75487"	"844.3"	"85.081"	"42.8040"	"11964"	"11964"	"11939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1213.4"	""	"1200.5"	""	"1261.7"	""	"1216.6"	""	"1563.6"	"1555.7"	""	"716"	"16"	"35.000"	"28.000"	"0.876764640580419"	"15"	"0.003788"	"0.08897"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLTINPAK"	"[K].mLTINPAk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"673.41638"	"1345.82549"	"1345.82776"	"-1.69"	"-0.00114"	"12/62"	"12"	"62"	"18388937.9316406"	"HCD"	"MS2"	"49.59439"	"697.2"	"53.143"	"42.2235"	"11682"	"11682"	"11660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1227.5"	""	"995.6"	""	"1065.7"	""	"855.0"	""	"1145.4"	"1307.9"	""	"714"	"21"	"35.000"	"28.000"	"0.288847236006682"	"19"	"0.000494"	"0.002665"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLTINPAK"	"[K].mLTINPAk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"673.41711"	"1345.82695"	"1345.82776"	"-0.60"	"-0.00041"	"6/62"	"6"	"62"	"15568951.0975342"	"HCD"	"MS2"	"36.80445"	"806.8"	"80.223"	"42.4757"	"11829"	"11829"	"11811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1408.5"	""	"1144.0"	""	"1220.6"	""	"993.9"	"5.2"	"1354.2"	"1505.9"	""	"693"	"19"	"35.000"	"28.000"	"0.428255785688523"	"20"	"0.000523"	"0.00301"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINSVDIK"	"[K].vINSVDIk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"673.42401"	"1345.84075"	"1345.84552"	"-3.55"	"-0.00239"	"14/70"	"14"	"70"	"5348623.69464111"	"HCD"	"MS2"	"15.7035"	"406.7"	"100.000"	"41.3249"	"11317"	"11317"	"11301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"628.4"	""	"596.7"	""	"565.2"	""	"620.8"	"0.5"	"709.6"	"728.5"	""	"595"	"47"	"34.000"	"27.000"	"0.000590863237913818"	""	"0.0001889"	"0.0006139"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QLKGELAK"	"[K].qLKGELAk.[E]"	"N-Term(TMT6plex); Q1(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q62924"	"A-kinase anchor protein 11 OS=Rattus norvegicus OX=10116 GN=Akap11 PE=1 SV=1"	"Q62924"	"A-kinase anchor protein 11 OS=Rattus norvegicus OX=10116 GN=Akap11 PE=1 SV=1"	"1"	"2"	"2"	"0.0435"	"0.0000"	"1"	"1"	"1"	"673.42487"	"1345.84245"	"1345.84552"	"-2.28"	"-0.00153"	"10/70"	"10"	"70"	"3268362.15649414"	"HCD"	"MS2"	"0"	"285.6"	"100.000"	"41.9736"	"11581"	"11581"	"11562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"376.2"	""	"306.0"	""	"315.1"	""	"524.3"	""	"594.3"	"599.3"	""	"614"	"23"	"34.000"	"27.000"	"0.141624495390036"	""	"0.0006037"	"0.004681"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"QLGLSGIAK"	"[].qLGLSGIAk.[]"	"N-Term(TMT6plex); Q1(Deamidated); K9(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0435"	"2"	"2"	"2"	"673.42487"	"1345.84245"	"1345.84552"	"-2.28"	"-0.00153"	"10/80"	"10"	"80"	"3268362.15649414"	"HCD"	"MS2"	"0"	"285.6"	"100.000"	"41.9736"	"11581"	"11581"	"11562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"376.2"	""	"306.0"	""	"315.1"	""	"524.3"	""	"594.3"	"599.3"	""	"614"	"22"	"34.000"	"27.000"	"0.206603833479286"	""	"0.0003839"	"0.001729"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINSVDIK"	"[K].vINSVDIk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"673.42535"	"1345.84343"	"1345.84552"	"-1.55"	"-0.00105"	"14/70"	"14"	"70"	"4591186.21948242"	"HCD"	"MS2"	"0"	"344.1"	"100.000"	"41.5519"	"11454"	"11454"	"11437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"534.1"	""	"473.3"	""	"478.3"	""	"528.6"	""	"607.5"	"638.1"	""	"613"	"45"	"34.000"	"27.000"	"0.000936333321200555"	""	"0.0001889"	"0.0007515"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITLNK"	"[R].wLITLNk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63074"	"Eukaryotic translation initiation factor 4E OS=Rattus norvegicus OX=10116 GN=Eif4e PE=1 SV=1"	"P63074"	"Eukaryotic translation initiation factor 4E OS=Rattus norvegicus OX=10116 GN=Eif4e PE=1 SV=1"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"673.43365"	"1345.86003"	"1345.86078"	"-0.55"	"-0.00037"	"12/50"	"12"	"50"	"2896850.0300293"	"HCD"	"MS2"	"27.93947"	"185.6"	"100.000"	"63.4159"	"20348"	"20348"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"273.8"	""	"241.5"	""	"265.3"	""	"298.8"	"1.8"	"339.4"	"337.2"	""	"489"	"32"	"33.000"	"26.000"	"0.014331078122368"	""	"0.0003839"	"0.001742"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITLNK"	"[R].wLITLNk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63074"	"Eukaryotic translation initiation factor 4E OS=Rattus norvegicus OX=10116 GN=Eif4e PE=1 SV=1"	"P63074"	"Eukaryotic translation initiation factor 4E OS=Rattus norvegicus OX=10116 GN=Eif4e PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"673.43396"	"1345.86064"	"1345.86078"	"-0.10"	"-0.00007"	"6/50"	"6"	"50"	"2567981.60046387"	"HCD"	"MS2"	"22.39212"	"188.6"	"100.000"	"63.3505"	"20268"	"20268"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.6"	""	"273.3"	""	"273.6"	""	"291.7"	""	"333.8"	"364.0"	""	"489"	"32"	"33.000"	"26.000"	"0.016042751761106"	""	"0.0004166"	"0.002144"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAPGKK"	"[K].gTAPGkk.[V]"	"N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"449.29651"	"1345.87497"	"1345.87705"	"-1.54"	"-0.00069"	"6/50"	"6"	"50"	"2666339.77349854"	"HCD"	"MS2"	"13.05791"	"254.1"	"100.000"	"23.2390"	"4024"	"4024"	"4013"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"423.1"	""	"439.3"	""	"429.8"	""	"323.3"	""	"380.9"	"408.2"	""	"333"	"7"	"32.000"	"25.000"	"3.29165445078625"	"13"	"0.007411"	"0.2775"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKKGTAPGK"	"[R].tKKGTAPGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"2"	"3"	"3"	"0.1250"	"0.0000"	"1"	"1"	"1"	"449.29663"	"1345.87534"	"1345.85676"	"13.81"	"0.00619"	"7/86"	"7"	"86"	"18427248.4884033"	"HCD"	"MS2"	"5.620321"	"1387.3"	"100.000"	"23.8136"	"4216"	"4216"	"4202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1324.7"	""	"1627.5"	""	"1537.4"	""	"2442.2"	""	"3162.6"	"3131.5"	""	"333"	"8"	"32.000"	"25.000"	"2.9608352177148"	"13"	"0.007783"	"0.3079"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAPGKK"	"[K].gTAPGkk.[V]"	"N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"449.29706"	"1345.87662"	"1345.87705"	"-0.32"	"-0.00014"	"6/50"	"6"	"50"	"2545045.21875"	"HCD"	"MS2"	"27.55301"	"254.2"	"100.000"	"23.1900"	"3970"	"3970"	"3955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"413.8"	""	"492.1"	""	"419.6"	""	"309.3"	""	"352.2"	"415.7"	""	"333"	"7"	"32.000"	"25.000"	"3.21672724783317"	"15"	"0.004789"	"0.1391"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLMGNIDLSR"	"[R].vLMGNIDLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"673.88562"	"1346.76396"	"1346.76634"	"-1.76"	"-0.00119"	"8/86"	"8"	"86"	"4753344.95593262"	"HCD"	"MS2"	"0"	"271.2"	"100.000"	"50.3286"	"15023"	"15023"	"15012"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"262.7"	""	"287.1"	""	"244.8"	""	"484.4"	"4.7"	"633.7"	"666.4"	""	"975"	"43"	"36.000"	"29.000"	"0.00220279772882775"	"23"	"0"	"0.0001655"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLMGNIDLSR"	"[R].vLMGNIDLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"673.88574"	"1346.76421"	"1346.76634"	"-1.58"	"-0.00106"	"9/86"	"9"	"86"	"4600414.61590576"	"HCD"	"MS2"	"100"	"300.0"	"100.000"	"50.0845"	"14875"	"14875"	"14857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"312.6"	""	"327.0"	""	"312.8"	""	"515.6"	""	"681.7"	"708.2"	""	"975"	"29"	"36.000"	"29.000"	"0.0587455020931251"	"22"	"0.0001308"	"0.0002635"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLDAGHK"	"[K].tFLDAGHk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"673.89349"	"1346.77971"	"1346.78326"	"-2.63"	"-0.00177"	"7/62"	"7"	"62"	"2639361.84057617"	"HCD"	"MS2"	"0"	"224.1"	"100.000"	"33.2167"	"8005"	"8005"	"7993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.9"	""	"286.0"	""	"304.9"	""	"373.4"	""	"397.4"	"440.9"	""	"919"	"41"	"36.000"	"29.000"	"0.00335185725961975"	"25"	"0.0001889"	"0.0006077"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLDAGHK"	"[K].tFLDAGHk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"673.89362"	"1346.77995"	"1346.78326"	"-2.45"	"-0.00165"	"7/62"	"7"	"62"	"2710809.17449951"	"HCD"	"MS2"	"0"	"227.4"	"100.000"	"33.2845"	"8074"	"8074"	"8063"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"320.9"	""	"288.3"	""	"331.3"	""	"387.0"	"0.4"	"401.0"	"424.4"	""	"921"	"41"	"36.000"	"29.000"	"0.00377771886163881"	"25"	"0.0001889"	"0.0004013"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLDAGHK"	"[K].tFLDAGHk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"449.59851"	"1346.78098"	"1346.78326"	"-1.69"	"-0.00076"	"7/62"	"7"	"62"	"28087992.8599243"	"HCD"	"MS2"	"0"	"1243.5"	"100.000"	"33.1501"	"7979"	"7979"	"7960"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1670.7"	""	"1561.0"	""	"1715.2"	""	"2181.6"	""	"2299.3"	"2364.9"	""	"900"	"44"	"36.000"	"29.000"	"0.001691268319298"	"22"	"7.476E-05"	"0.0001854"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLDAGHK"	"[K].tFLDAGHk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"449.59857"	"1346.78116"	"1346.78326"	"-1.56"	"-0.00070"	"7/62"	"7"	"62"	"25942324.4925537"	"HCD"	"MS2"	"30.23179"	"1054.9"	"100.000"	"33.2113"	"8046"	"8046"	"8033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1442.5"	""	"1342.8"	""	"1422.1"	""	"1876.0"	""	"1930.2"	"1988.0"	""	"900"	"41"	"36.000"	"29.000"	"0.00345312670212818"	"23"	"0.0001308"	"0.0002149"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFEAQIAGLR"	"[R].iFEAQIAGLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.90277"	"1346.79827"	"1346.79935"	"-0.81"	"-0.00054"	"9/82"	"9"	"82"	"14171335.9603882"	"HCD"	"MS2"	"28.2664"	"703.8"	"81.194"	"55.7222"	"17210"	"17210"	"17189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"955.2"	""	"1044.8"	""	"1126.4"	""	"946.2"	""	"1247.0"	"1354.9"	""	"842"	"26"	"36.000"	"29.000"	"0.112274749776354"	"14"	"0.0001308"	"0.0002493"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFEAQIAGLR"	"[R].iFEAQIAGLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.90363"	"1346.79997"	"1346.79935"	"0.46"	"0.00031"	"9/82"	"9"	"82"	"11935198.3737793"	"HCD"	"MS2"	"32.63215"	"733.7"	"100.000"	"55.5183"	"17073"	"17073"	"17051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1000.0"	""	"1053.9"	""	"1156.7"	""	"1028.0"	""	"1289.6"	"1433.5"	""	"799"	"26"	"36.000"	"29.000"	"0.111819303719393"	"14"	"0.0001308"	"0.0002123"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQNVLGEK"	"[R].tQNVLGEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"673.90466"	"1346.80205"	"1346.80439"	"-1.73"	"-0.00117"	"5/80"	"5"	"80"	"405613.757629395"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"33.0303"	"7973"	"7973"	"7942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.9"	""	"59.0"	""	"68.0"	""	"70.0"	""	"84.6"	"96.9"	""	"794"	"13"	"35.000"	"28.000"	"2.13201623158991"	"17"	"0.001217"	"0.01838"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQNVLGEK"	"[R].tQNVLGEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"673.90515"	"1346.80303"	"1346.80439"	"-1.01"	"-0.00068"	"5/80"	"5"	"80"	"484849.089782715"	"HCD"	"MS2"	"0"	"56.1"	"100.000"	"32.9003"	"7877"	"7877"	"7848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.5"	""	"68.7"	""	"81.4"	""	"80.3"	""	"99.4"	"121.5"	""	"870"	"16"	"36.000"	"29.000"	"1.21755687404095"	"20"	"0.001217"	"0.01774"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"673.90570"	"1346.80412"	"1346.80439"	"-0.19"	"-0.00013"	"12/70"	"12"	"70"	"4184050.62786865"	"HCD"	"MS2"	"0"	"344.6"	"100.000"	"34.7698"	"8674"	"8674"	"8650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.8"	""	"376.4"	""	"369.5"	""	"595.5"	""	"724.0"	"802.3"	""	"878"	"38"	"36.000"	"29.000"	"0.0069097847750067"	""	"0.0001889"	"0.0007169"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"673.90570"	"1346.80412"	"1346.80439"	"-0.19"	"-0.00013"	"7/70"	"7"	"70"	"4486171.28112793"	"HCD"	"MS2"	"0"	"362.5"	"100.000"	"34.6987"	"8602"	"8602"	"8574"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"431.4"	""	"388.5"	""	"393.8"	""	"632.2"	""	"765.2"	"837.0"	""	"878"	"46"	"36.000"	"29.000"	"0.00120355106147634"	"29"	"0.0001889"	"0.0006993"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDVVEK"	"[K].iWDVVEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.2778"	"0.0000"	"1"	"1"	"1"	"449.60724"	"1346.80716"	"1346.80841"	"-0.92"	"-0.00042"	"5/54"	"5"	"54"	"4357653.93048096"	"HCD"	"MS2"	"4.139825"	"216.0"	"100.000"	"56.6248"	"17579"	"17579"	"17557"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"383.1"	""	"354.2"	""	"243.0"	""	"366.0"	""	"349.5"	"351.8"	""	"831"	"18"	"36.000"	"29.000"	"0.695938764988985"	"26"	"0.001217"	"0.01648"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDVVEK"	"[K].iWDVVEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.3200"	"0.0000"	"1"	"1"	"1"	"449.60727"	"1346.80725"	"1346.80841"	"-0.86"	"-0.00038"	"5/54"	"5"	"54"	"5035366.47546387"	"HCD"	"MS2"	"3.912931"	"226.7"	"100.000"	"56.4355"	"17448"	"17448"	"17419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"437.1"	""	"356.6"	""	"240.8"	""	"383.0"	""	"358.9"	"368.8"	""	"831"	"25"	"36.000"	"29.000"	"0.134763111008655"	""	"0.001007"	"0.01087"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDVVEK"	"[K].iWDVVEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"673.90753"	"1346.80779"	"1346.80841"	"-0.46"	"-0.00031"	"6/54"	"6"	"54"	"9842323.34204102"	"HCD"	"MS2"	"26.08493"	"449.8"	"69.928"	"56.8068"	"17654"	"17654"	"17637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"822.0"	""	"692.2"	""	"539.1"	""	"742.8"	""	"706.2"	"752.4"	""	"832"	"28"	"36.000"	"29.000"	"0.0609667901837659"	"24"	"0.0006037"	"0.005356"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDVVEK"	"[K].iWDVVEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"673.90759"	"1346.80791"	"1346.80841"	"-0.37"	"-0.00025"	"6/54"	"6"	"54"	"11026591.8726196"	"HCD"	"MS2"	"27.81055"	"834.0"	"100.000"	"56.4977"	"17527"	"17527"	"17509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1650.3"	""	"1299.8"	""	"959.0"	""	"1374.9"	"2.5"	"1304.3"	"1286.8"	""	"832"	"30"	"36.000"	"29.000"	"0.0466759676989617"	"22"	"0.0006037"	"0.006056"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDVVEK"	"[K].iWDVVEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"673.90784"	"1346.80840"	"1346.80841"	"-0.01"	"-0.00001"	"6/54"	"6"	"54"	"11240457.6453857"	"HCD"	"MS2"	"26.41582"	"859.9"	"100.000"	"56.2974"	"17391"	"17391"	"17371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1690.6"	""	"1349.6"	""	"950.9"	""	"1422.6"	"2.8"	"1326.9"	"1380.3"	""	"831"	"30"	"36.000"	"29.000"	"0.0466198667762466"	"24"	"0.0005959"	"0.003662"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDVVEK"	"[K].iWDVVEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"673.90790"	"1346.80852"	"1346.80841"	"0.08"	"0.00006"	"6/54"	"6"	"54"	"10221977.1154785"	"HCD"	"MS2"	"19.35385"	"445.5"	"65.251"	"56.6018"	"17516"	"17516"	"17499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"820.6"	""	"667.6"	""	"526.7"	""	"708.9"	""	"727.4"	"761.2"	""	"827"	"30"	"36.000"	"29.000"	"0.0452350957453511"	"25"	"0.00103"	"0.01115"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYHLQSK"	"[K].iYHLQSk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"673.91229"	"1346.81731"	"1346.81964"	"-1.73"	"-0.00117"	"4/52"	"4"	"52"	"570006.115234375"	"HCD"	"MS2"	"0"	"52.8"	"100.000"	"31.0641"	"7125"	"7125"	"7094"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.2"	""	"65.4"	""	"71.9"	""	"89.0"	""	"111.8"	"100.6"	""	"859"	"17"	"36.000"	"29.000"	"0.829780392158768"	"14"	"0.0001889"	"0.0011"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYHLQSK"	"[K].iYHLQSk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"449.61081"	"1346.81787"	"1346.81964"	"-1.31"	"-0.00059"	"8/52"	"8"	"52"	"24405280.6727295"	"HCD"	"MS2"	"36.17213"	"1080.8"	"89.021"	"31.0939"	"7179"	"7179"	"7152"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1588.8"	""	"1515.5"	""	"1602.6"	""	"1693.5"	""	"1965.7"	"1869.2"	""	"862"	"20"	"36.000"	"29.000"	"0.399463653876499"	"22"	"0.0001889"	"0.0005668"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYHLQSK"	"[K].iYHLQSk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"449.61087"	"1346.81806"	"1346.81964"	"-1.18"	"-0.00053"	"8/52"	"8"	"52"	"29217052.6785889"	"HCD"	"MS2"	"34.20547"	"708.5"	"46.606"	"31.0067"	"7101"	"7101"	"7080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1067.6"	""	"997.3"	""	"1066.5"	""	"1114.6"	""	"1239.1"	"1225.1"	""	"862"	"18"	"36.000"	"29.000"	"0.63602951584191"	"21"	"0.0001889"	"0.000588"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQLSIHK"	"[K].yQLSIHk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"449.61105"	"1346.81861"	"1346.81964"	"-0.77"	"-0.00035"	"6/58"	"6"	"58"	"10528987.2138062"	"HCD"	"MS2"	"17.69"	"430.0"	"100.000"	"35.0817"	"8802"	"8802"	"8778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"536.3"	""	"553.7"	""	"599.1"	""	"705.9"	""	"868.3"	"819.0"	""	"847"	"33"	"36.000"	"29.000"	"0.0214710564954337"	"20"	"0.0001308"	"0.0002658"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQLSIHK"	"[K].yQLSIHk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"449.61118"	"1346.81897"	"1346.81964"	"-0.50"	"-0.00022"	"6/58"	"6"	"58"	"11322353.1420898"	"HCD"	"MS2"	"13.07336"	"270.3"	"52.874"	"35.0356"	"8740"	"8740"	"8718"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"347.5"	""	"337.0"	""	"369.0"	""	"446.0"	""	"539.0"	"527.7"	""	"849"	"33"	"36.000"	"29.000"	"0.0217208939186861"	"21"	"0.0001308"	"0.0002366"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAQQAVK"	"[R].mLAQQAVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"673.91418"	"1346.82109"	"1346.82301"	"-1.43"	"-0.00096"	"7/66"	"7"	"66"	"4736959.33605957"	"HCD"	"MS2"	"9.93565"	"370.9"	"100.000"	"35.2421"	"8825"	"8825"	"8795"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"415.6"	""	"412.6"	""	"419.4"	""	"630.9"	"0.5"	"826.0"	"822.0"	""	"812"	"41"	"36.000"	"29.000"	"0.00320277207753133"	"21"	"0.0001889"	"0.0009703"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAQQAVK"	"[R].mLAQQAVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"673.91437"	"1346.82146"	"1346.82301"	"-1.15"	"-0.00078"	"7/66"	"7"	"66"	"3859526.00970459"	"HCD"	"MS2"	"0"	"306.2"	"100.000"	"35.3223"	"8901"	"8901"	"8874"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.6"	""	"346.2"	""	"361.4"	""	"473.2"	""	"693.9"	"686.5"	""	"811"	"43"	"36.000"	"29.000"	"0.00214778526498067"	"22"	"0.0001889"	"0.0008343"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQGVSGLK"	"[K].sLQGVSGLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"673.92255"	"1346.83782"	"1346.84077"	"-2.19"	"-0.00148"	"14/86"	"14"	"86"	"2263783.45123291"	"HCD"	"MS2"	"0"	"212.6"	"100.000"	"38.8494"	"10349"	"10349"	"10318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"296.7"	""	"304.7"	""	"318.6"	""	"336.3"	""	"368.7"	"387.9"	""	"688"	"51"	"35.000"	"28.000"	"0.000274510172420184"	"27"	"0"	"0.0001144"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLWIDTK"	"[R].lLWIDTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"673.92499"	"1346.84270"	"1346.84479"	"-1.56"	"-0.00105"	"6/50"	"6"	"50"	"3144482.0055542"	"HCD"	"MS2"	"17.51925"	"228.7"	"100.000"	"62.7528"	"20077"	"20077"	"20051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.4"	""	"321.2"	""	"331.5"	""	"371.6"	"0.7"	"429.3"	"429.1"	""	"612"	"33"	"34.000"	"27.000"	"0.0164710553449984"	""	"0.000494"	"0.002639"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLWIDTK"	"[R].lLWIDTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"673.92651"	"1346.84575"	"1346.84479"	"0.71"	"0.00048"	"10/50"	"10"	"50"	"3145707.36193848"	"HCD"	"MS2"	"17.1159"	"229.4"	"100.000"	"62.6552"	"19984"	"19984"	"19961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"299.3"	""	"305.6"	""	"337.8"	""	"376.1"	"2.1"	"435.0"	"418.1"	""	"628"	"24"	"34.000"	"27.000"	"0.125293819341713"	""	"0.0003839"	"0.002"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWNLESK"	"[R].lWNLESk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70483"	"Striatin OS=Rattus norvegicus OX=10116 GN=Strn PE=1 SV=1"	"P70483"	"Striatin OS=Rattus norvegicus OX=10116 GN=Strn PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"674.40424"	"1347.80120"	"1347.80366"	"-1.83"	"-0.00123"	"6/58"	"6"	"58"	"2770686.17504883"	"HCD"	"MS2"	"0"	"246.1"	"100.000"	"49.9906"	"14838"	"14838"	"14819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.9"	""	"277.1"	""	"306.4"	""	"436.3"	""	"515.9"	"506.4"	""	"950"	"26"	"36.000"	"29.000"	"0.11794882250154"	"28"	"0.0006037"	"0.003729"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVDLLMK"	"[K].nGVDLLMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"674.40613"	"1347.80498"	"1347.80703"	"-1.52"	"-0.00102"	"7/70"	"7"	"70"	"8145862.3112793"	"HCD"	"MS2"	"2.733143"	"657.2"	"100.000"	"47.8096"	"13951"	"13951"	"13928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1016.5"	""	"949.6"	""	"952.1"	""	"875.7"	"4.5"	"1202.8"	"1223.1"	""	"941"	"32"	"36.000"	"29.000"	"0.0326256841730796"	""	"0.0001889"	"0.001057"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVDLLMK"	"[K].nGVDLLMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"674.40643"	"1347.80559"	"1347.80703"	"-1.07"	"-0.00072"	"11/70"	"11"	"70"	"8597826.7769165"	"HCD"	"MS2"	"6.254097"	"728.6"	"100.000"	"48.0754"	"14108"	"14108"	"14082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1149.1"	""	"1053.5"	""	"1066.6"	""	"1022.5"	"1.0"	"1293.9"	"1310.3"	""	"932"	"32"	"36.000"	"29.000"	"0.0313607121828492"	""	"0.0001889"	"0.0009036"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NGVDLLMK"	"[K].nGVDLLMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"674.40698"	"1347.80669"	"1347.80703"	"-0.25"	"-0.00017"	"7/70"	"7"	"70"	"1581267.87713623"	"HCD"	"MS2"	"0"	"156.2"	"100.000"	"48.3091"	"14203"	"14203"	"14186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.6"	""	"226.4"	""	"242.6"	""	"219.2"	"0.1"	"278.2"	"286.0"	""	"909"	"1"	"36.000"	"29.000"	"39.8596873209782"	"13"	"0.0005564"	"0.003526"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSLVTSFIR"	"[K].vPSLVTSFIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"674.41241"	"1347.81755"	"1347.81975"	"-1.63"	"-0.00110"	"14/80"	"14"	"80"	"4946245.55432129"	"HCD"	"MS2"	"0"	"148.1"	"100.000"	"66.1385"	"21460"	"21460"	"21443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.1"	""	"211.7"	""	"251.5"	""	"210.7"	""	"220.3"	"273.3"	""	"868"	"44"	"36.000"	"29.000"	"0.00189447871192232"	"25"	"0"	"0.0001293"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSLVTSFIR"	"[K].vPSLVTSFIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"674.41321"	"1347.81914"	"1347.81975"	"-0.45"	"-0.00031"	"7/80"	"7"	"80"	"1189795.59484863"	"HCD"	"MS2"	"23.01444"	"62.1"	"100.000"	"66.4708"	"21595"	"21595"	"21571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.2"	""	"80.0"	""	"97.9"	""	"93.0"	""	"115.4"	"118.2"	""	"868"	"23"	"36.000"	"29.000"	"0.226719946025618"	"20"	"0.0001859"	"0.0003235"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSLVTSFIR"	"[K].vPSLVTSFIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"674.41327"	"1347.81926"	"1347.81975"	"-0.36"	"-0.00025"	"14/80"	"14"	"80"	"4610179.26184082"	"HCD"	"MS2"	"11.76945"	"137.3"	"100.000"	"66.2039"	"21434"	"21434"	"21417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.3"	""	"182.8"	""	"239.7"	""	"198.4"	"3.4"	"209.3"	"242.4"	""	"868"	"44"	"36.000"	"29.000"	"0.00188143721220187"	"22"	"0"	"0.0001272"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSLVTSFIR"	"[K].vPSLVTSFIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"674.41333"	"1347.81938"	"1347.81975"	"-0.27"	"-0.00018"	"7/80"	"7"	"80"	"1334781.50939941"	"HCD"	"MS2"	"18.06991"	"63.4"	"100.000"	"66.5272"	"21565"	"21565"	"21545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.4"	""	"78.4"	""	"106.6"	""	"90.7"	"2.3"	"113.2"	"116.8"	""	"870"	"22"	"36.000"	"29.000"	"0.283458351416467"	"20"	"7.476E-05"	"0.0001945"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THFLLMK"	"[R].tHFLLMk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"449.94534"	"1347.82148"	"1347.82228"	"-0.60"	"-0.00027"	"7/48"	"7"	"48"	"9488772.04138184"	"HCD"	"MS2"	"41.59249"	"464.4"	"100.000"	"40.5337"	"10993"	"10993"	"10965"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"574.5"	""	"630.9"	""	"695.2"	""	"581.4"	"14.6"	"1020.2"	"893.0"	""	"873"	"14"	"36.000"	"29.000"	"1.59582126539129"	"15"	"0.000523"	"0.00299"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.5957"	"0.0000"	"1"	"1"	"1"	"674.41571"	"1347.82414"	"1347.82479"	"-0.48"	"-0.00032"	"14/64"	"14"	"64"	"4178101.23510742"	"HCD"	"MS2"	"3.699817"	"316.0"	"100.000"	"35.4967"	"8929"	"8929"	"8907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"485.9"	""	"372.7"	""	"408.4"	""	"512.3"	"3.4"	"600.6"	"611.5"	""	"824"	"47"	"36.000"	"29.000"	"0.000905518267587348"	""	"0.0001889"	"0.0006126"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"674.41577"	"1347.82427"	"1347.82479"	"-0.39"	"-0.00026"	"14/64"	"14"	"64"	"3030072.6552124"	"HCD"	"MS2"	"0"	"237.1"	"100.000"	"35.5978"	"9014"	"9014"	"8986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"353.9"	""	"262.5"	""	"333.5"	""	"381.6"	"2.8"	"443.7"	"469.9"	""	"824"	"46"	"36.000"	"29.000"	"0.000937340141478093"	"29"	"0.0001889"	"0.0005227"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSFQGLK"	"[K].iPSFQGLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"674.42267"	"1347.83806"	"1347.84004"	"-1.47"	"-0.00099"	"6/62"	"6"	"62"	"6928418.63745117"	"HCD"	"MS2"	"20.9487"	"543.9"	"100.000"	"52.1974"	"15736"	"15736"	"15714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"731.1"	""	"667.6"	""	"733.5"	""	"899.1"	"10.4"	"1033.1"	"1082.7"	""	"602"	"4"	"34.000"	"27.000"	"13.4142530767648"	"13"	"0.0007076"	"0.006952"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFSLQPK"	"[K].vAFSLQPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"449.95093"	"1347.83823"	"1347.84004"	"-1.35"	"-0.00060"	"5/60"	"5"	"60"	"3969077.40698242"	"HCD"	"MS2"	"56.41972"	"188.7"	"100.000"	"45.7272"	"13099"	"13099"	"13079"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.0"	""	"268.2"	""	"274.1"	""	"308.5"	""	"345.2"	"349.3"	""	"602"	"14"	"34.000"	"27.000"	"1.29290464456231"	"18"	"0.004631"	"0.1342"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAITVPFK"	"[R].nAITVPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68A21"	"Transcriptional activator protein Pur-beta OS=Rattus norvegicus OX=10116 GN=Purb PE=1 SV=3"	"Q68A21"	"Transcriptional activator protein Pur-beta OS=Rattus norvegicus OX=10116 GN=Purb PE=1 SV=3"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"674.42303"	"1347.83879"	"1347.84004"	"-0.93"	"-0.00063"	"11/70"	"11"	"70"	"10056003.9391479"	"HCD"	"MS2"	"3.004893"	"449.9"	"66.802"	"46.1019"	"13300"	"13300"	"13284"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"588.0"	""	"573.4"	""	"614.1"	""	"835.1"	""	"774.7"	"877.4"	""	"602"	"34"	"34.000"	"27.000"	"0.0127516532780912"	""	"0.0002277"	"0.001334"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSFQGLK"	"[K].iPSFQGLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"674.42322"	"1347.83916"	"1347.84004"	"-0.66"	"-0.00044"	"6/62"	"6"	"62"	"4639880.40100098"	"HCD"	"MS2"	"14.62951"	"354.1"	"100.000"	"52.3724"	"15858"	"15858"	"15830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"524.9"	""	"460.4"	""	"474.0"	""	"565.7"	"7.1"	"662.4"	"660.7"	""	"603"	"12"	"34.000"	"27.000"	"1.69936753231525"	"15"	"0.0004166"	"0.002194"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFSLQPK"	"[K].vAFSLQPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"449.95132"	"1347.83942"	"1347.84004"	"-0.46"	"-0.00021"	"6/60"	"6"	"60"	"6154728.72424316"	"HCD"	"MS2"	"6.858199"	"260.9"	"100.000"	"46.0189"	"13267"	"13267"	"13249"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"357.3"	""	"356.5"	""	"380.1"	""	"454.7"	""	"458.4"	"467.7"	""	"603"	"30"	"34.000"	"27.000"	"0.0283979713351637"	"22"	"0.001422"	"0.01949"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAITVPFK"	"[R].nAITVPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68A21"	"Transcriptional activator protein Pur-beta OS=Rattus norvegicus OX=10116 GN=Purb PE=1 SV=3"	"Q68A21"	"Transcriptional activator protein Pur-beta OS=Rattus norvegicus OX=10116 GN=Purb PE=1 SV=3"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"674.42340"	"1347.83953"	"1347.84004"	"-0.38"	"-0.00026"	"7/70"	"7"	"70"	"8710388.66101074"	"HCD"	"MS2"	"0"	"542.8"	"100.000"	"45.8605"	"13153"	"13153"	"13133"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"694.0"	""	"671.2"	""	"712.6"	""	"1003.4"	"1.2"	"991.1"	"1073.2"	""	"603"	"34"	"34.000"	"27.000"	"0.0132217005379158"	""	"0.0001889"	"0.0007721"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALNPTVFK"	"[K].aLNPTVFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"674.42340"	"1347.83953"	"1347.84004"	"-0.38"	"-0.00026"	"7/66"	"7"	"66"	"10472277.8974609"	"HCD"	"MS2"	"2.831414"	"579.0"	"85.977"	"44.7909"	"12721"	"12721"	"12704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"931.1"	""	"872.7"	""	"772.3"	""	"967.3"	""	"1012.8"	"923.4"	""	"603"	"42"	"34.000"	"27.000"	"0.00196918861623213"	"26"	"0.0001889"	"0.0008739"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIAAMTVGK"	"[K].vIAAMTVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"674.42346"	"1347.83965"	"1347.84341"	"-2.79"	"-0.00188"	"13/64"	"13"	"64"	"3330246.74761963"	"HCD"	"MS2"	"33.54137"	"264.1"	"100.000"	"45.3542"	"13000"	"13000"	"12971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.4"	""	"323.3"	""	"366.9"	""	"473.0"	"11.4"	"577.3"	"451.9"	""	"603"	"7"	"34.000"	"27.000"	"6.46081516237697"	"17"	"0.0001889"	"0.0006743"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALNPTVFK"	"[K].aLNPTVFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"674.42358"	"1347.83989"	"1347.84004"	"-0.11"	"-0.00008"	"7/66"	"7"	"66"	"10728654.5692749"	"HCD"	"MS2"	"0"	"646.8"	"90.937"	"45.0158"	"12861"	"12861"	"12843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1078.0"	""	"990.4"	""	"853.1"	""	"1051.7"	"3.9"	"1131.0"	"1009.5"	""	"603"	"42"	"34.000"	"27.000"	"0.00192880052898019"	"26"	"0.0002277"	"0.001224"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWTSVIR"	"[K].kWTSVIR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"449.95508"	"1347.85068"	"1347.85128"	"-0.44"	"-0.00020"	"6/62"	"6"	"62"	"11260068.8571167"	"HCD"	"MS2"	"18.96599"	"497.2"	"68.577"	"35.6505"	"9035"	"9035"	"9017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"751.8"	""	"707.4"	""	"715.6"	""	"843.8"	""	"849.7"	"840.4"	""	"560"	"4"	"34.000"	"27.000"	"12.3924744261535"	"13"	"0.001966"	"0.03077"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWTSVIR"	"[K].kWTSVIR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"449.95517"	"1347.85096"	"1347.85128"	"-0.24"	"-0.00011"	"6/62"	"6"	"62"	"11335941.4159546"	"HCD"	"MS2"	"23.01685"	"735.7"	"100.000"	"35.5747"	"8961"	"8961"	"8939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1067.5"	""	"1033.5"	""	"1040.4"	""	"1254.0"	""	"1251.2"	"1320.0"	""	"558"	"5"	"34.000"	"27.000"	"9.13280538711957"	"14"	"0.003107"	"0.05917"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFAYPDTHR"	"[R].lFAYPDTHR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"450.24475"	"1348.71970"	"1348.72110"	"-1.04"	"-0.00047"	"7/66"	"7"	"66"	"14357681.5203857"	"HCD"	"MS2"	"0"	"173.3"	"100.000"	"36.5559"	"9364"	"9364"	"9338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.6"	""	"213.4"	""	"229.1"	""	"305.4"	"1.2"	"370.5"	"304.6"	""	"836"	"39"	"36.000"	"29.000"	"0.00547238043813752"	"23"	"0.0002277"	"0.001187"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFAYPDTHR"	"[R].lFAYPDTHR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"450.24490"	"1348.72016"	"1348.72110"	"-0.70"	"-0.00031"	"7/66"	"7"	"66"	"12472858.6270752"	"HCD"	"MS2"	"1.969214"	"154.6"	"95.477"	"36.6701"	"9454"	"9454"	"9431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.2"	""	"193.7"	""	"195.3"	""	"259.5"	"4.5"	"340.3"	"270.2"	""	"857"	"42"	"36.000"	"29.000"	"0.0025058255105591"	"25"	"0.0001889"	"0.000924"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNIMLSQK"	"[R].gNIMLSQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"674.90369"	"1348.80010"	"1348.80228"	"-1.62"	"-0.00109"	"7/68"	"7"	"68"	"1417536.75463867"	"HCD"	"MS2"	"0"	"139.3"	"100.000"	"36.4984"	"9384"	"9384"	"9353"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.9"	""	"196.1"	""	"159.1"	""	"171.0"	""	"263.7"	"288.8"	""	"769"	"42"	"35.000"	"28.000"	"0.00271579099614109"	"26"	"0.0001889"	"0.0003984"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNIMLSQK"	"[R].gNIMLSQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"674.90417"	"1348.80107"	"1348.80228"	"-0.89"	"-0.00060"	"5/68"	"5"	"68"	"1244432.70532227"	"HCD"	"MS2"	"0"	"124.4"	"100.000"	"36.4480"	"9320"	"9320"	"9290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.6"	""	"185.0"	""	"171.5"	""	"159.5"	""	"227.9"	"235.1"	""	"774"	"13"	"35.000"	"28.000"	"1.74868250473095"	"15"	"0.0001889"	"0.001097"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTLEEFLR"	"[R].lVTLEEFLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JI85"	"Nucleobindin-2 OS=Rattus norvegicus OX=10116 GN=Nucb2 PE=1 SV=1"	"Q9JI85"	"Nucleobindin-2 OS=Rattus norvegicus OX=10116 GN=Nucb2 PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"674.90509"	"1348.80290"	"1348.80377"	"-0.64"	"-0.00043"	"11/70"	"11"	"70"	"2253015.89666748"	"HCD"	"MS2"	"31.39327"	"104.7"	"100.000"	"77.0464"	"25840"	"25840"	"25817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.2"	""	"143.3"	""	"171.4"	""	"178.9"	""	"198.3"	"174.8"	""	"743"	"32"	"35.000"	"28.000"	"0.0214762681611224"	"17"	"0.0001308"	"0.0002806"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTLEEFLR"	"[R].lVTLEEFLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JI85"	"Nucleobindin-2 OS=Rattus norvegicus OX=10116 GN=Nucb2 PE=1 SV=1"	"Q9JI85"	"Nucleobindin-2 OS=Rattus norvegicus OX=10116 GN=Nucb2 PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"674.90607"	"1348.80486"	"1348.80377"	"0.81"	"0.00054"	"7/70"	"7"	"70"	"2259859.17944336"	"HCD"	"MS2"	"19.14267"	"103.7"	"100.000"	"77.0198"	"25880"	"25880"	"25861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.7"	""	"152.0"	""	"147.5"	""	"192.1"	""	"187.1"	"181.0"	""	"777"	"40"	"35.000"	"28.000"	"0.00360073386382878"	"18"	"0.0001308"	"0.0002133"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDITIGPK"	"[R].fDITIGPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53676"	"AP-3 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap3m1 PE=1 SV=1"	"P53676"	"AP-3 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap3m1 PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"674.91620"	"1348.82512"	"1348.82406"	"0.79"	"0.00053"	"7/60"	"7"	"60"	"1885578.47717285"	"HCD"	"MS2"	"26.45198"	"153.2"	"100.000"	"54.4907"	"16653"	"16653"	"16624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.0"	""	"198.8"	""	"211.1"	""	"234.5"	"2.8"	"305.3"	"279.9"	""	"541"	"39"	"34.000"	"27.000"	"0.00355768317108"	"25"	"0.0001859"	"0.0003442"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDITIGPK"	"[R].fDITIGPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53676"	"AP-3 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap3m1 PE=1 SV=1"	"P53676"	"AP-3 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap3m1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"674.91656"	"1348.82585"	"1348.82406"	"1.33"	"0.00090"	"12/60"	"12"	"60"	"2282309.23834229"	"HCD"	"MS2"	"38.4024"	"177.8"	"100.000"	"54.7226"	"16801"	"16801"	"16773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.4"	""	"223.9"	""	"242.4"	""	"280.3"	""	"356.4"	"333.1"	""	"534"	"35"	"34.000"	"27.000"	"0.00938666376210557"	"21"	"0.0001889"	"0.0004251"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLLAIFK"	"[R].eGLLAIFk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1;Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1; Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"674.93274"	"1348.85820"	"1348.86044"	"-1.66"	"-0.00112"	"7/56"	"7"	"56"	"4886057.5916748"	"HCD"	"MS2"	"9.856145"	"328.7"	"100.000"	"70.4113"	"23195"	"23195"	"23178"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"462.8"	""	"494.8"	""	"475.0"	""	"534.9"	""	"541.7"	"603.3"	""	"273"	"40"	"31.000"	"24.000"	"0.00130356487991926"	""	"0.0001889"	"0.0007898"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLLAIFK"	"[R].eGLLAIFk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1;Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1; Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"450.29102"	"1348.85849"	"1348.86044"	"-1.45"	"-0.00065"	"6/56"	"6"	"56"	"1709788.32208252"	"HCD"	"MS2"	"4.797737"	"71.2"	"100.000"	"70.4643"	"23216"	"23216"	"23194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.1"	""	"112.0"	""	"105.8"	""	"124.2"	""	"122.8"	"130.9"	""	"244"	"32"	"30.000"	"23.000"	"0.00822924193791465"	""	"0.0001889"	"0.0008356"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLLAIFK"	"[R].eGLLAIFk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1;Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1; Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"674.93329"	"1348.85930"	"1348.86044"	"-0.85"	"-0.00057"	"7/56"	"7"	"56"	"4903385.11346436"	"HCD"	"MS2"	"18.71926"	"342.8"	"100.000"	"70.4864"	"23173"	"23173"	"23155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.2"	""	"524.5"	""	"477.0"	""	"545.0"	""	"576.7"	"647.5"	""	"244"	"40"	"30.000"	"23.000"	"0.00116241132010886"	""	"0.0001889"	"0.0005468"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLLAIFK"	"[R].eGLLAIFk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1;Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q9WU82; Q6P0K8"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1; Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"450.29153"	"1348.86005"	"1348.86044"	"-0.29"	"-0.00013"	"6/56"	"6"	"56"	"1774021.50408936"	"HCD"	"MS2"	"10.886"	"74.8"	"100.000"	"70.6111"	"23224"	"23224"	"23203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.8"	""	"102.8"	""	"95.1"	""	"128.6"	"0.5"	"144.0"	"147.0"	""	"244"	"30"	"30.000"	"23.000"	"0.0114119492246001"	"22"	"0.0001889"	"0.0006161"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLMGK"	"[K].tLVLLmGk.[E]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"450.29218"	"1348.86197"	"1348.86382"	"-1.37"	"-0.00061"	"10/56"	"10"	"56"	"6425747.05401611"	"HCD"	"MS2"	"0"	"167.3"	"75.634"	"49.9598"	"14874"	"14874"	"14846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.7"	""	"167.1"	""	"209.5"	""	"460.9"	"0.4"	"285.5"	"295.1"	""	"246"	"42"	"30.000"	"23.000"	"0.000774292604914354"	""	"0.00103"	"0.01149"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLMGK"	"[K].tLVLLmGk.[E]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"450.29239"	"1348.86261"	"1348.86382"	"-0.89"	"-0.00040"	"10/56"	"10"	"56"	"2722921.21038818"	"HCD"	"MS2"	"30.50395"	"109.7"	"100.000"	"49.7537"	"14743"	"14743"	"14719"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.4"	""	"117.7"	""	"126.4"	""	"286.3"	"1.1"	"207.7"	"197.3"	""	"238"	"38"	"30.000"	"23.000"	"0.00206322675732742"	""	"0.0006037"	"0.003833"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLMGK"	"[K].tLVLLmGk.[E]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"674.93506"	"1348.86284"	"1348.86382"	"-0.72"	"-0.00049"	"12/56"	"12"	"56"	"27809888.3005371"	"HCD"	"MS2"	"16.01073"	"546.5"	"37.240"	"49.9094"	"14853"	"14853"	"14830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"505.3"	""	"530.3"	""	"656.2"	""	"1577.1"	"8.0"	"953.6"	"950.6"	""	"238"	"37"	"30.000"	"23.000"	"0.00237436215481297"	"21"	"0.0008731"	"0.008889"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLMGK"	"[K].tLVLLmGk.[E]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"674.93512"	"1348.86296"	"1348.86382"	"-0.63"	"-0.00043"	"12/56"	"12"	"56"	"24779737.3831787"	"HCD"	"MS2"	"36.38123"	"874.5"	"66.225"	"49.6412"	"14697"	"14697"	"14671"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"831.6"	""	"883.6"	""	"1026.3"	""	"2503.4"	""	"1512.6"	"1533.9"	""	"238"	"35"	"30.000"	"23.000"	"0.00336160717014969"	"17"	"0.0003839"	"0.002065"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPSNTAFR"	"[K].tNLPSNTAFR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"Q5QE80; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1;Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"Q5QE80; Q5QE79; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 4 OS=Rattus norvegicus OX=10116 GN=Aox4 PE=2 SV=1; Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"675.37280"	"1349.73833"	"1349.73748"	"0.63"	"0.00042"	"6/100"	"6"	"100"	"560383.740356445"	"HCD"	"MS2"	"0"	"52.6"	"100.000"	"34.0816"	"8350"	"8350"	"8332"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.6"	""	"73.3"	""	"67.0"	""	"83.3"	"0.3"	"94.2"	"106.2"	""	"922"	"21"	"36.000"	"29.000"	"0.336279912227356"	"17"	"0.0006037"	"0.005562"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEAFSK"	"[K].fYEAFSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"450.58783"	"1349.74894"	"1349.75056"	"-1.20"	"-0.00054"	"5/54"	"5"	"54"	"5432967.87414551"	"HCD"	"MS2"	"12.02969"	"227.4"	"100.000"	"48.9302"	"14410"	"14410"	"14383"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"383.6"	""	"311.5"	""	"342.8"	""	"355.8"	""	"362.7"	"394.5"	""	"951"	"21"	"36.000"	"29.000"	"0.410346299463194"	"14"	"0.0008125"	"0.007722"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEAFSK"	"[K].fYEAFSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"675.37854"	"1349.74980"	"1349.75056"	"-0.56"	"-0.00038"	"12/54"	"12"	"54"	"15738078.0343628"	"HCD"	"MS2"	"12.41217"	"1300.0"	"100.000"	"48.7991"	"14356"	"14356"	"14335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2373.6"	""	"1907.5"	""	"1998.0"	""	"2004.7"	""	"1891.3"	"2104.3"	""	"930"	"22"	"36.000"	"29.000"	"0.326928628745983"	"17"	"0.00103"	"0.0114"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEAFSK"	"[K].fYEAFSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"450.58829"	"1349.75031"	"1349.75056"	"-0.19"	"-0.00008"	"4/54"	"4"	"54"	"5993980.62103271"	"HCD"	"MS2"	"3.401869"	"251.5"	"100.000"	"49.2029"	"14569"	"14569"	"14542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"420.3"	""	"357.4"	""	"373.4"	""	"400.7"	""	"410.8"	"415.9"	""	"917"	"23"	"36.000"	"29.000"	"0.212490412699088"	"17"	"0.001007"	"0.01107"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEAFSK"	"[K].fYEAFSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"675.37891"	"1349.75054"	"1349.75056"	"-0.02"	"-0.00001"	"10/54"	"10"	"54"	"14723911.309082"	"HCD"	"MS2"	"3.662721"	"531.8"	"40.254"	"49.1006"	"14480"	"14480"	"14463"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"905.7"	""	"768.0"	""	"844.9"	""	"773.7"	""	"816.8"	"919.6"	""	"913"	"21"	"36.000"	"29.000"	"0.405920310302153"	"22"	"0.001058"	"0.01318"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEAFSK"	"[K].fYEAFSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"675.37933"	"1349.75139"	"1349.75056"	"0.62"	"0.00042"	"7/54"	"7"	"54"	"15772002.6015015"	"HCD"	"MS2"	"17.24861"	"1317.4"	"100.000"	"49.0743"	"14516"	"14516"	"14495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2469.1"	""	"1970.1"	""	"2020.8"	""	"2044.9"	""	"1878.4"	"2054.6"	""	"927"	"19"	"36.000"	"29.000"	"0.598480133319873"	"17"	"0.001058"	"0.0131"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEAFSK"	"[K].fYEAFSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"675.37946"	"1349.75163"	"1349.75056"	"0.80"	"0.00054"	"5/54"	"5"	"54"	"14303168.0427246"	"HCD"	"MS2"	"5.034176"	"560.2"	"46.811"	"49.3734"	"14639"	"14639"	"14622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"975.6"	""	"810.0"	""	"900.7"	""	"827.2"	"0.0"	"829.7"	"947.7"	""	"917"	"24"	"36.000"	"29.000"	"0.190256428547856"	"23"	"0.001058"	"0.01326"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVLTAFANGR"	"[K].tAVLTAFANGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P86173"	"Actin-like protein 6B OS=Rattus norvegicus OX=10116 GN=Actl6b PE=1 SV=2"	"P86173"	"Actin-like protein 6B OS=Rattus norvegicus OX=10116 GN=Actl6b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.39111"	"1349.77495"	"1349.77387"	"0.80"	"0.00054"	"8/92"	"8"	"92"	"777253.163879395"	"HCD"	"MS2"	"34.37364"	"81.2"	"100.000"	"43.8549"	"12339"	"12339"	"12316"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.8"	""	"109.9"	""	"123.4"	""	"122.4"	""	"149.2"	"155.1"	""	"906"	"23"	"36.000"	"29.000"	"0.227037816833154"	"14"	"0"	"0.00016"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVQFVPFR"	"[R].dIVQFVPFR.[DE]"	"N-Term(TMT6plex)"	"1"	"2"	"H1UBN0"	"Copine-7 OS=Rattus norvegicus OX=10116 GN=Cpne7 PE=1 SV=1"	"Q5BJS7; H1UBN0"	"Copine-9 OS=Rattus norvegicus OX=10116 GN=Cpne9 PE=2 SV=1; Copine-7 OS=Rattus norvegicus OX=10116 GN=Cpne7 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"675.39191"	"1349.77654"	"1349.77789"	"-1.00"	"-0.00068"	"12/74"	"12"	"74"	"5981106.52911377"	"HCD"	"MS2"	"4.819875"	"260.3"	"100.000"	"63.7619"	"20489"	"20489"	"20467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"392.0"	""	"396.3"	""	"379.2"	""	"408.5"	""	"433.7"	"455.4"	""	"882"	"35"	"36.000"	"29.000"	"0.0151160593866985"	"19"	"0.0001889"	"0.0009383"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVQFVPFR"	"[R].dIVQFVPFR.[DE]"	"N-Term(TMT6plex)"	"1"	"2"	"H1UBN0"	"Copine-7 OS=Rattus norvegicus OX=10116 GN=Cpne7 PE=1 SV=1"	"Q5BJS7; H1UBN0"	"Copine-9 OS=Rattus norvegicus OX=10116 GN=Cpne9 PE=2 SV=1; Copine-7 OS=Rattus norvegicus OX=10116 GN=Cpne7 PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"675.39203"	"1349.77678"	"1349.77789"	"-0.82"	"-0.00055"	"12/74"	"12"	"74"	"4015704.74261475"	"HCD"	"MS2"	"2.350828"	"186.8"	"100.000"	"64.0615"	"20612"	"20612"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"272.7"	""	"272.5"	""	"279.9"	""	"307.9"	"1.2"	"308.7"	"323.8"	""	"879"	"32"	"36.000"	"29.000"	"0.0293061575069387"	"15"	"0.0001889"	"0.0009806"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVQFVPFR"	"[R].dIVQFVPFR.[DE]"	"N-Term(TMT6plex)"	"1"	"2"	"H1UBN0"	"Copine-7 OS=Rattus norvegicus OX=10116 GN=Cpne7 PE=1 SV=1"	"Q5BJS7; H1UBN0"	"Copine-9 OS=Rattus norvegicus OX=10116 GN=Cpne9 PE=2 SV=1; Copine-7 OS=Rattus norvegicus OX=10116 GN=Cpne7 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"675.39209"	"1349.77690"	"1349.77789"	"-0.73"	"-0.00049"	"7/74"	"7"	"74"	"3912983.88293457"	"HCD"	"MS2"	"9.084122"	"186.2"	"100.000"	"64.0101"	"20538"	"20538"	"20521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.3"	""	"288.3"	""	"277.1"	""	"288.9"	""	"322.8"	"306.1"	""	"873"	"34"	"36.000"	"29.000"	"0.0170602051013384"	"18"	"0.0001308"	"0.0002104"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVQFVPFR"	"[R].dIVQFVPFR.[DE]"	"N-Term(TMT6plex)"	"1"	"2"	"H1UBN0"	"Copine-7 OS=Rattus norvegicus OX=10116 GN=Cpne7 PE=1 SV=1"	"Q5BJS7; H1UBN0"	"Copine-9 OS=Rattus norvegicus OX=10116 GN=Cpne9 PE=2 SV=1; Copine-7 OS=Rattus norvegicus OX=10116 GN=Cpne7 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"675.39313"	"1349.77898"	"1349.77789"	"0.81"	"0.00055"	"7/74"	"7"	"74"	"6082302.33001709"	"HCD"	"MS2"	"15.9847"	"250.3"	"100.000"	"63.7153"	"20417"	"20417"	"20393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.5"	""	"368.1"	""	"372.2"	""	"395.1"	"2.9"	"420.6"	"430.4"	""	"901"	"35"	"36.000"	"29.000"	"0.0131733064621842"	"18"	"0.0001308"	"0.0002856"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDTTQK"	"[R].iWDTTQk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"675.39404"	"1349.78081"	"1349.78292"	"-1.57"	"-0.00106"	"6/54"	"6"	"54"	"15899895.354248"	"HCD"	"MS2"	"0"	"600.4"	"49.159"	"39.9202"	"10786"	"10786"	"10765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"983.6"	""	"797.2"	""	"791.5"	""	"934.4"	""	"1098.3"	"1082.4"	""	"868"	"27"	"36.000"	"29.000"	"0.081374761650126"	"23"	"0.00103"	"0.01217"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDTTQK"	"[R].iWDTTQk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"675.39417"	"1349.78105"	"1349.78292"	"-1.38"	"-0.00093"	"12/54"	"12"	"54"	"14501298.401062"	"HCD"	"MS2"	"0"	"851.3"	"74.149"	"39.8060"	"10698"	"10698"	"10677"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1370.0"	""	"1095.0"	""	"1098.3"	""	"1302.9"	""	"1600.1"	"1600.6"	""	"868"	"20"	"36.000"	"29.000"	"0.441051932705882"	"22"	"0.00103"	"0.01131"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGGSMDAK"	"[R].iIGGSMDAk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"675.39630"	"1349.78533"	"1349.78629"	"-0.72"	"-0.00048"	"13/68"	"13"	"68"	"7500235.76947021"	"HCD"	"MS2"	"4.044232"	"591.4"	"100.000"	"38.8815"	"10362"	"10362"	"10334"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1295.4"	""	"877.7"	""	"733.7"	""	"744.0"	"0.2"	"1029.9"	"906.5"	""	"859"	"45"	"36.000"	"29.000"	"0.00139624994227044"	"20"	"0.0001308"	"0.000219"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGGSMDAK"	"[R].iIGGSMDAk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"675.39661"	"1349.78594"	"1349.78629"	"-0.26"	"-0.00018"	"8/68"	"8"	"68"	"6922453.99890137"	"HCD"	"MS2"	"0"	"564.0"	"100.000"	"38.7750"	"10275"	"10275"	"10246"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1169.5"	""	"840.4"	""	"712.8"	""	"732.3"	""	"989.1"	"887.2"	""	"833"	"45"	"36.000"	"29.000"	"0.00127530777013217"	"21"	"7.476E-05"	"0.0001914"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYAWNPK"	"[K].lYAWNPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.5500"	"0.0000"	"1"	"1"	"1"	"450.60376"	"1349.79673"	"1349.79818"	"-1.08"	"-0.00048"	"5/54"	"5"	"54"	"3592682.1918335"	"HCD"	"MS2"	"6.593864"	"138.3"	"100.000"	"47.0295"	"13632"	"13632"	"13608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.5"	""	"197.2"	""	"199.7"	""	"210.6"	"3.7"	"239.9"	"248.7"	""	"754"	"20"	"35.000"	"28.000"	"0.353460876611057"	"23"	"0.001817"	"0.02515"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYAWNPK"	"[K].lYAWNPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"450.60400"	"1349.79746"	"1349.79818"	"-0.53"	"-0.00024"	"5/54"	"5"	"54"	"2119130.31512451"	"HCD"	"MS2"	"3.217166"	"103.0"	"100.000"	"47.3646"	"13817"	"13817"	"13794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.8"	""	"158.9"	""	"146.6"	""	"149.9"	""	"181.6"	"188.2"	""	"762"	"17"	"35.000"	"28.000"	"0.837384611531019"	"18"	"0.0009727"	"0.01069"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLATWATK"	"[K].tLATWATk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"675.41290"	"1349.81853"	"1349.81931"	"-0.58"	"-0.00039"	"7/68"	"7"	"68"	"16766124.144104"	"HCD"	"MS2"	"0"	"1185.3"	"100.000"	"42.6164"	"11843"	"11843"	"11820"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1742.5"	""	"1685.5"	""	"1684.7"	""	"1811.1"	"0.6"	"2102.8"	"2197.7"	""	"610"	"43"	"34.000"	"27.000"	"0.00148696189481533"	""	"0.0003146"	"0.001468"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLATWATK"	"[K].tLATWATk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"675.41333"	"1349.81938"	"1349.81931"	"0.06"	"0.00004"	"7/68"	"7"	"68"	"16734827.2888184"	"HCD"	"MS2"	"26.56853"	"1215.6"	"100.000"	"42.8818"	"11996"	"11996"	"11971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1766.4"	""	"1711.4"	""	"1742.5"	""	"1860.6"	""	"2182.7"	"2250.1"	""	"610"	"43"	"34.000"	"27.000"	"0.00153921695756876"	""	"0.0002277"	"0.001308"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVAEAFAR"	"[R].kVAEAFAR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"450.61432"	"1349.82840"	"1349.83054"	"-1.58"	"-0.00071"	"5/70"	"5"	"70"	"15457245.3515015"	"HCD"	"MS2"	"43.61699"	"880.4"	"83.884"	"30.2779"	"6846"	"6846"	"6822"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1603.1"	""	"1352.3"	""	"1344.2"	""	"1210.5"	""	"1341.4"	"1471.9"	""	"478"	"11"	"33.000"	"26.000"	"1.99709121357268"	"13"	"0.0003839"	"0.001789"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVAEAFAR"	"[R].kVAEAFAR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.41815"	"1349.82903"	"1349.83054"	"-1.12"	"-0.00076"	"5/70"	"5"	"70"	"1859739.44378662"	"HCD"	"MS2"	"44.88667"	"121.1"	"100.000"	"30.2916"	"6852"	"6852"	"6822"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.0"	""	"186.8"	""	"171.9"	""	"169.6"	""	"177.4"	"203.2"	""	"506"	"18"	"34.000"	"27.000"	"0.423760547634688"	"14"	"0.005293"	"0.1612"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVAEAFAR"	"[R].kVAEAFAR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"450.61456"	"1349.82914"	"1349.83054"	"-1.04"	"-0.00047"	"5/70"	"5"	"70"	"14577141.223938"	"HCD"	"MS2"	"34.06395"	"690.3"	"68.523"	"30.2230"	"6782"	"6782"	"6762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1222.3"	""	"1077.0"	""	"1058.4"	""	"953.3"	""	"1093.0"	"1127.7"	""	"506"	"11"	"34.000"	"27.000"	"2.07071591398102"	"13"	"0.0003839"	"0.001629"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVAEAFAR"	"[R].kVAEAFAR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"1"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"675.41870"	"1349.83013"	"1349.83054"	"-0.31"	"-0.00021"	"7/70"	"7"	"70"	"1571418.88470459"	"HCD"	"MS2"	"14.72023"	"96.6"	"100.000"	"30.2456"	"6792"	"6792"	"6762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.9"	""	"151.8"	""	"139.6"	""	"128.5"	""	"154.7"	"165.8"	""	"498"	"20"	"33.000"	"26.000"	"0.275549322210439"	"17"	"0.000494"	"0.002673"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEIELFK"	"[R].lEIELFk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29534"	"Vascular cell adhesion protein 1 OS=Rattus norvegicus OX=10116 GN=Vcam1 PE=2 SV=1"	"P29534"	"Vascular cell adhesion protein 1 OS=Rattus norvegicus OX=10116 GN=Vcam1 PE=2 SV=1"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"675.42554"	"1349.84380"	"1349.84446"	"-0.49"	"-0.00033"	"12/52"	"12"	"52"	"1185470.76055908"	"HCD"	"MS2"	"8.408422"	"91.1"	"100.000"	"66.5653"	"21634"	"21634"	"21603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.4"	""	"115.9"	""	"121.3"	""	"157.2"	"0.2"	"184.2"	"181.6"	""	"407"	"32"	"33.000"	"26.000"	"0.0126346848465818"	""	"0.0001889"	"0.0008844"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEIELFK"	"[R].lEIELFk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29534"	"Vascular cell adhesion protein 1 OS=Rattus norvegicus OX=10116 GN=Vcam1 PE=2 SV=1"	"P29534"	"Vascular cell adhesion protein 1 OS=Rattus norvegicus OX=10116 GN=Vcam1 PE=2 SV=1"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"675.42676"	"1349.84624"	"1349.84446"	"1.32"	"0.00089"	"12/52"	"12"	"52"	"1163547.09777832"	"HCD"	"MS2"	"15.49406"	"97.2"	"100.000"	"66.6145"	"21601"	"21601"	"21577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.5"	""	"125.2"	""	"117.0"	""	"172.6"	""	"205.5"	"191.8"	""	"414"	"31"	"33.000"	"26.000"	"0.0183218931234983"	""	"0.0001889"	"0.0008947"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGQGYLIK"	"[K].iGQGYLIk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.1500"	"0.0000"	"1"	"1"	"1"	"675.43109"	"1349.85491"	"1349.85569"	"-0.58"	"-0.00039"	"7/68"	"7"	"68"	"30136864.7351074"	"HCD"	"MS2"	"0"	"1606.6"	"71.185"	"45.1867"	"12882"	"12882"	"12864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2245.5"	""	"2281.5"	""	"2433.2"	""	"2552.7"	""	"2922.6"	"2785.5"	""	"304"	"20"	"31.000"	"24.000"	"0.166664685813764"	""	"0.0006037"	"0.004193"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGQGYLIK"	"[K].iGQGYLIk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"675.43121"	"1349.85515"	"1349.85569"	"-0.40"	"-0.00027"	"7/68"	"7"	"68"	"24356080.1930542"	"HCD"	"MS2"	"0"	"1533.4"	"81.666"	"45.4094"	"13022"	"13022"	"13003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2117.7"	""	"2172.7"	""	"2306.3"	""	"2482.6"	""	"2837.8"	"2609.8"	""	"304"	"22"	"31.000"	"24.000"	"0.0981394428132677"	""	"0.0006037"	"0.005175"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLLQVCER"	"[R].tNLLQVcER.[I]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"675.85608"	"1350.70488"	"1350.70711"	"-1.65"	"-0.00111"	"7/92"	"7"	"92"	"2224119.33685303"	"HCD"	"MS2"	"0"	"146.3"	"100.000"	"53.9379"	"16482"	"16482"	"16468"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.3"	""	"215.8"	""	"202.5"	""	"218.3"	""	"264.1"	"273.1"	""	"817"	"36"	"36.000"	"29.000"	"0.0113813049738526"	"22"	"0.0001308"	"0.0002748"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLLQVCER"	"[R].tNLLQVcER.[I]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"675.85614"	"1350.70500"	"1350.70711"	"-1.56"	"-0.00105"	"6/92"	"6"	"92"	"1601205.72729492"	"HCD"	"MS2"	"45.74077"	"119.2"	"100.000"	"54.4402"	"16632"	"16632"	"16609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.3"	""	"175.8"	""	"174.1"	""	"169.9"	""	"218.2"	"222.3"	""	"817"	"19"	"36.000"	"29.000"	"0.519029521977689"	"21"	"0.0001859"	"0.0003741"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLLQVCER"	"[R].tNLLQVcER.[I]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"675.85626"	"1350.70525"	"1350.70711"	"-1.38"	"-0.00093"	"7/92"	"7"	"92"	"2756797.24108887"	"HCD"	"MS2"	"0"	"168.2"	"100.000"	"53.8095"	"16376"	"16376"	"16366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.5"	""	"235.9"	""	"243.1"	""	"250.0"	""	"299.5"	"311.7"	""	"823"	"38"	"36.000"	"29.000"	"0.00622830453731499"	"23"	"0.0001859"	"0.000337"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLLQVCER"	"[R].tNLLQVcER.[I]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"675.85657"	"1350.70586"	"1350.70711"	"-0.93"	"-0.00062"	"7/92"	"7"	"92"	"1586318.61260986"	"HCD"	"MS2"	"19.25638"	"131.6"	"100.000"	"54.6098"	"16755"	"16755"	"16725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.9"	""	"176.4"	""	"183.7"	""	"202.3"	""	"246.1"	"243.9"	""	"836"	"14"	"36.000"	"29.000"	"1.77900136689904"	"15"	"0.0003839"	"0.001675"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLLQVCER"	"[R].tNLLQVcER.[I]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"675.85687"	"1350.70647"	"1350.70711"	"-0.47"	"-0.00032"	"7/92"	"7"	"92"	"2467502.14312744"	"HCD"	"MS2"	"9.213392"	"153.4"	"100.000"	"54.2564"	"16610"	"16610"	"16589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.9"	""	"203.3"	""	"217.6"	""	"247.3"	""	"277.5"	"281.2"	""	"826"	"39"	"36.000"	"29.000"	"0.0050228481826695"	"19"	"0"	"0.0001736"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLLQVCER"	"[R].tNLLQVcER.[I]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.85699"	"1350.70671"	"1350.70711"	"-0.29"	"-0.00020"	"7/92"	"7"	"92"	"2196384.55145264"	"HCD"	"MS2"	"0"	"140.6"	"100.000"	"54.1212"	"16502"	"16502"	"16477"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"206.3"	""	"197.3"	""	"205.8"	""	"215.5"	""	"248.9"	"261.0"	""	"830"	"32"	"36.000"	"29.000"	"0.0240462909017156"	"15"	"0.0001859"	"0.0003202"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGVLSFWR"	"[K].eQGVLSFWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"675.87164"	"1350.73601"	"1350.73675"	"-0.55"	"-0.00037"	"6/88"	"6"	"88"	"7192073.73187256"	"HCD"	"MS2"	"3.975891"	"343.0"	"100.000"	"56.9243"	"17702"	"17702"	"17685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"426.6"	""	"516.9"	""	"505.4"	""	"529.8"	"3.1"	"625.6"	"642.9"	""	"915"	"39"	"36.000"	"29.000"	"0.00605886252351559"	"29"	"0.0001889"	"0.0004785"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGVLSFWR"	"[K].eQGVLSFWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"675.87231"	"1350.73735"	"1350.73675"	"0.44"	"0.00030"	"6/88"	"6"	"88"	"7294120.52093506"	"HCD"	"MS2"	"1.678859"	"325.4"	"100.000"	"56.7193"	"17564"	"17564"	"17547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"415.5"	""	"498.1"	""	"463.8"	""	"508.0"	"3.2"	"581.2"	"613.7"	""	"898"	"39"	"36.000"	"29.000"	"0.00598751123041333"	"28"	"0.0001859"	"0.0003711"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQFVTGTSR"	"[R].lLQFVTGTSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"675.90082"	"1350.79436"	"1350.79427"	"0.07"	"0.00005"	"7/92"	"7"	"92"	"4814092.37496948"	"HCD"	"MS2"	"18.41672"	"229.8"	"100.000"	"57.7194"	"18026"	"18026"	"18005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.7"	""	"275.4"	""	"330.3"	""	"408.5"	""	"429.0"	"443.5"	""	"757"	"39"	"35.000"	"28.000"	"0.00441637440057574"	"24"	"0"	"0.0001285"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQFVTGTSR"	"[R].lLQFVTGTSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"675.90100"	"1350.79473"	"1350.79427"	"0.34"	"0.00023"	"7/92"	"7"	"92"	"4410420.91925049"	"HCD"	"MS2"	"29.2956"	"208.4"	"100.000"	"57.5087"	"17886"	"17886"	"17867"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.3"	""	"255.5"	""	"291.0"	""	"359.4"	""	"406.4"	"409.6"	""	"760"	"42"	"35.000"	"28.000"	"0.00216662423466684"	"25"	"0"	"0.0001191"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGQGSFGK"	"[K].vLGQGSFGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"675.91052"	"1350.81377"	"1350.81456"	"-0.58"	"-0.00039"	"8/74"	"8"	"74"	"1770256.95303345"	"HCD"	"MS2"	"22.41694"	"175.6"	"100.000"	"40.2537"	"10878"	"10878"	"10853"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.8"	""	"235.5"	""	"267.4"	""	"271.7"	"0.7"	"316.9"	"319.3"	""	"533"	"29"	"34.000"	"27.000"	"0.0361990533515476"	"20"	"0"	"0.0001205"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGQGSFGK"	"[K].vLGQGSFGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"675.91119"	"1350.81511"	"1350.81456"	"0.41"	"0.00028"	"8/74"	"8"	"74"	"1581675.76831055"	"HCD"	"MS2"	"23.42333"	"159.8"	"100.000"	"40.4092"	"10986"	"10986"	"10957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.7"	""	"229.4"	""	"230.7"	""	"256.8"	"0.6"	"279.7"	"286.8"	""	"535"	"28"	"34.000"	"27.000"	"0.0468083989207096"	"22"	"7.476E-05"	"0.0001995"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVAELWK"	"[R].fVAELWk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"675.91260"	"1350.81792"	"1350.81858"	"-0.49"	"-0.00033"	"6/48"	"6"	"48"	"1781342.94915771"	"HCD"	"MS2"	"0"	"135.3"	"100.000"	"63.2479"	"20279"	"20279"	"20259"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.6"	""	"111.3"	""	"130.7"	""	"316.8"	"4.7"	"301.7"	"328.8"	""	"517"	"28"	"34.000"	"27.000"	"0.038588735487617"	"19"	"0.0003839"	"0.001853"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLDFLK"	"[K].gSLLDFLk.[SDG]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P50545; Q07014"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4;Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"P50545; Q07014; Q62844; Q9WUD9"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"0"	"3"	"3"	"0.3846"	"0.0000"	"1"	"1"	"1"	"450.95087"	"1350.83805"	"1350.83971"	"-1.23"	"-0.00055"	"6/62"	"6"	"62"	"1732560.43078613"	"HCD"	"MS2"	"11.30376"	"74.6"	"100.000"	"72.2904"	"23962"	"23962"	"23935"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.9"	""	"90.8"	""	"93.8"	""	"134.4"	"0.4"	"149.1"	"159.0"	""	"360"	"26"	"32.000"	"25.000"	"0.0421961186757586"	""	"0.0004166"	"0.002353"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAIDYGIK"	"[K].lAIDYGIk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70550"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1"	"P70550"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"675.92273"	"1350.83818"	"1350.83971"	"-1.13"	"-0.00076"	"7/56"	"7"	"56"	"1656709.28485107"	"HCD"	"MS2"	"0"	"143.1"	"100.000"	"50.1807"	"14913"	"14913"	"14899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.6"	"1.7"	"192.5"	""	"210.9"	""	"222.0"	""	"266.8"	"281.5"	""	"360"	"27"	"32.000"	"25.000"	"0.0368360034610441"	"16"	"0.0001889"	"0.000764"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDYGIK"	"[K].lALDYGIk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"675.92273"	"1350.83818"	"1350.83971"	"-1.13"	"-0.00076"	"7/56"	"7"	"56"	"1656709.28485107"	"HCD"	"MS2"	"0"	"143.1"	"100.000"	"50.1807"	"14913"	"14913"	"14899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.6"	"1.7"	"192.5"	""	"210.9"	""	"222.0"	""	"266.8"	"281.5"	""	"360"	"27"	"32.000"	"25.000"	"0.0368360034610441"	"16"	"0.0001889"	"0.000764"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAIDYGIK"	"[K].lAIDYGIk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70550"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1"	"P70550"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"450.95102"	"1350.83850"	"1350.83971"	"-0.89"	"-0.00040"	"6/56"	"6"	"56"	"1955724.80151367"	"HCD"	"MS2"	"42.15543"	"83.3"	"100.000"	"51.9370"	"15630"	"15630"	"15602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.0"	""	"115.1"	""	"122.3"	""	"115.4"	""	"160.8"	"168.1"	""	"356"	"16"	"32.000"	"25.000"	"0.484640832837869"	"17"	"0.0005564"	"0.003393"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDYGIK"	"[K].lALDYGIk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"450.95102"	"1350.83850"	"1350.83971"	"-0.89"	"-0.00040"	"6/56"	"6"	"56"	"1955724.80151367"	"HCD"	"MS2"	"42.15543"	"83.3"	"100.000"	"51.9370"	"15630"	"15630"	"15602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.0"	""	"115.1"	""	"122.3"	""	"115.4"	""	"160.8"	"168.1"	""	"356"	"16"	"32.000"	"25.000"	"0.484640832837869"	"17"	"0.0005564"	"0.003393"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAIDYGIK"	"[K].lAIDYGIk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70550"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1"	"P70550"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"675.92303"	"1350.83879"	"1350.83971"	"-0.68"	"-0.00046"	"12/56"	"12"	"56"	"10496519.3023071"	"HCD"	"MS2"	"15.98405"	"573.2"	"75.096"	"52.0383"	"15721"	"15721"	"15702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"836.3"	""	"835.8"	""	"801.1"	""	"815.4"	"9.7"	"1065.9"	"1066.6"	""	"356"	"33"	"32.000"	"25.000"	"0.00927726585767044"	"16"	"0.0003146"	"0.001402"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDYGIK"	"[K].lALDYGIk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"675.92303"	"1350.83879"	"1350.83971"	"-0.68"	"-0.00046"	"12/56"	"12"	"56"	"10496519.3023071"	"HCD"	"MS2"	"15.98405"	"573.2"	"75.096"	"52.0383"	"15721"	"15721"	"15702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"836.3"	""	"835.8"	""	"801.1"	""	"815.4"	"9.7"	"1065.9"	"1066.6"	""	"356"	"33"	"32.000"	"25.000"	"0.00927726585767044"	"16"	"0.0003146"	"0.001402"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAIDYGIK"	"[K].lAIDYGIk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70550"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1"	"P70550"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"675.92303"	"1350.83879"	"1350.83971"	"-0.68"	"-0.00046"	"12/56"	"12"	"56"	"9851936.66601563"	"HCD"	"MS2"	"18.36156"	"706.2"	"98.402"	"51.8380"	"15589"	"15589"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1030.3"	""	"1025.1"	""	"1023.4"	""	"1015.7"	"19.7"	"1282.4"	"1291.7"	""	"356"	"33"	"32.000"	"25.000"	"0.00929865216418434"	"16"	"0.0001889"	"0.001093"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDYGIK"	"[K].lALDYGIk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"675.92303"	"1350.83879"	"1350.83971"	"-0.68"	"-0.00046"	"12/56"	"12"	"56"	"9851936.66601563"	"HCD"	"MS2"	"18.36156"	"706.2"	"98.402"	"51.8380"	"15589"	"15589"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1030.3"	""	"1025.1"	""	"1023.4"	""	"1015.7"	"19.7"	"1282.4"	"1291.7"	""	"356"	"33"	"32.000"	"25.000"	"0.00929865216418434"	"16"	"0.0001889"	"0.001093"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNLYELK"	"[R].lNLYELk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"675.92328"	"1350.83928"	"1350.83971"	"-0.32"	"-0.00021"	"12/58"	"12"	"58"	"7733576.71789551"	"HCD"	"MS2"	"0"	"620.1"	"100.000"	"55.2311"	"16956"	"16956"	"16939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"945.4"	""	"745.0"	""	"737.3"	""	"1174.9"	"10.8"	"1077.7"	"1182.5"	""	"358"	"31"	"32.000"	"25.000"	"0.0141857738156004"	""	"0.0006037"	"0.004073"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLDFLK"	"[K].gSLLDFLk.[SDG]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P50545; Q07014"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4;Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"P50545; Q07014; Q62844; Q9WUD9"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"0"	"2"	"2"	"0.1951"	"0.0000"	"1"	"1"	"1"	"675.92340"	"1350.83953"	"1350.83971"	"-0.14"	"-0.00009"	"7/62"	"7"	"62"	"10049325.6854858"	"HCD"	"MS2"	"0.6983346"	"764.0"	"100.000"	"72.3044"	"23968"	"23968"	"23951"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"776.1"	""	"971.9"	""	"936.8"	""	"1375.7"	""	"1513.4"	"1683.9"	""	"358"	"41"	"32.000"	"25.000"	"0.00158071302174923"	""	"0.0003839"	"0.001601"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNLYELK"	"[R].lNLYELk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"675.92358"	"1350.83989"	"1350.83971"	"0.14"	"0.00009"	"12/58"	"12"	"58"	"9024880.31158447"	"HCD"	"MS2"	"2.059673"	"671.7"	"100.000"	"55.5219"	"17128"	"17128"	"17109"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1016.7"	""	"766.9"	""	"806.7"	""	"1250.4"	"12.5"	"1213.2"	"1298.7"	""	"348"	"33"	"32.000"	"25.000"	"0.00936589421578343"	""	"0.0008731"	"0.00904"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLDFLK"	"[K].gSLLDFLk.[SDG]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P50545; Q07014"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4;Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"P50545; Q07014; Q62844; Q9WUD9"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"450.95157"	"1350.84015"	"1350.83971"	"0.33"	"0.00015"	"6/62"	"6"	"62"	"1772186.50927734"	"HCD"	"MS2"	"19.30247"	"77.6"	"100.000"	"72.3773"	"23946"	"23946"	"23921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.5"	""	"95.8"	""	"92.3"	""	"150.7"	""	"149.7"	"172.9"	""	"358"	"26"	"32.000"	"25.000"	"0.0414813642344357"	""	"0.0004166"	"0.002355"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLDFLK"	"[K].gSLLDFLk.[SDG]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P50545; Q07014"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4;Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"P50545; Q07014; Q62844; Q9WUD9"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"675.92395"	"1350.84062"	"1350.83971"	"0.68"	"0.00046"	"7/62"	"7"	"62"	"9536120.08642578"	"HCD"	"MS2"	"0.5248439"	"757.7"	"100.000"	"72.3611"	"23939"	"23939"	"23921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"791.5"	""	"983.3"	""	"910.4"	""	"1318.5"	""	"1508.2"	"1690.6"	""	"358"	"40"	"32.000"	"25.000"	"0.00165140285460703"	""	"0.0002277"	"0.001218"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPLHSLK"	"[R].vVPLHSLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"450.96695"	"1350.88630"	"1350.88733"	"-0.76"	"-0.00034"	"6/56"	"6"	"56"	"13726128.1295166"	"HCD"	"MS2"	"18.03413"	"529.9"	"100.000"	"36.3541"	"9281"	"9281"	"9258"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"710.3"	""	"749.7"	""	"736.6"	""	"873.9"	"1.2"	"966.7"	"982.7"	""	"82"	"34"	"26.000"	"19.000"	"0.00158046126642966"	"18"	"0.0001889"	"0.0004859"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPLHSLK"	"[R].vVPLHSLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"450.96698"	"1350.88639"	"1350.88733"	"-0.70"	"-0.00031"	"6/56"	"6"	"56"	"13263628.3032837"	"HCD"	"MS2"	"13.78761"	"386.5"	"72.554"	"36.4735"	"9373"	"9373"	"9353"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"508.3"	""	"548.6"	""	"555.8"	""	"634.2"	"3.3"	"694.9"	"716.7"	""	"82"	"33"	"26.000"	"19.000"	"0.00225311758281626"	"17"	"0.0001889"	"0.0006227"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGNPWEK"	"[R].yGNPWEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"676.37396"	"1351.74065"	"1351.74106"	"-0.30"	"-0.00020"	"6/56"	"6"	"56"	"6484679.29193115"	"HCD"	"MS2"	"12.44484"	"536.1"	"100.000"	"39.0798"	"10400"	"10400"	"10374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"913.6"	""	"727.4"	""	"753.4"	""	"631.9"	""	"849.6"	"1204.3"	""	"889"	"28"	"36.000"	"29.000"	"0.0652937730412699"	"19"	"0.000523"	"0.003177"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGNPWEK"	"[R].yGNPWEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"676.37439"	"1351.74150"	"1351.74106"	"0.33"	"0.00022"	"5/56"	"5"	"56"	"6045371.85125732"	"HCD"	"MS2"	"6.077768"	"512.9"	"100.000"	"39.1065"	"10454"	"10454"	"10430"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"874.4"	""	"698.2"	""	"755.2"	""	"636.5"	"2.0"	"761.1"	"1124.8"	""	"903"	"23"	"36.000"	"29.000"	"0.204954639917567"	"18"	"0.0006037"	"0.005916"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMILQFISR"	"[K].dMILQFISR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"676.38239"	"1351.75749"	"1351.76052"	"-2.24"	"-0.00151"	"8/86"	"8"	"86"	"3440948.01165771"	"HCD"	"MS2"	"13.7679"	"156.5"	"100.000"	"68.8125"	"22491"	"22491"	"22474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.3"	""	"237.1"	""	"238.8"	""	"235.0"	""	"258.1"	"269.1"	""	"878"	"16"	"36.000"	"29.000"	"1.13884473997016"	"21"	"0.0001889"	"0.0006713"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMILQFISR"	"[K].dMILQFISR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"3"	"676.38281"	"1351.75835"	"1351.76052"	"-1.61"	"-0.00109"	"6/86"	"6"	"86"	"3967892.34747314"	"HCD"	"MS2"	"15.37293"	"178.4"	"100.000"	"68.7257"	"22507"	"22507"	"22490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.1"	""	"299.4"	""	"282.5"	""	"259.6"	""	"285.7"	"300.3"	""	"838"	"17"	"36.000"	"29.000"	"0.809494724830091"	"20"	"0.0001889"	"0.000721"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"451.25769"	"1351.75852"	"1351.75968"	"-0.86"	"-0.00039"	"5/54"	"5"	"54"	"7993691.53607178"	"HCD"	"MS2"	"37.00148"	"274.5"	"100.000"	"51.6283"	"15554"	"15554"	"15526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"455.6"	""	"440.9"	""	"418.9"	""	"300.1"	""	"465.6"	"519.0"	""	"836"	"19"	"36.000"	"29.000"	"0.506030019824101"	"19"	"0.002489"	"0.03768"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"451.25775"	"1351.75870"	"1351.75968"	"-0.73"	"-0.00033"	"5/54"	"5"	"54"	"9472272.27545166"	"HCD"	"MS2"	"13.74795"	"318.7"	"100.000"	"51.7626"	"15558"	"15558"	"15538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"451.6"	""	"489.2"	""	"520.7"	""	"342.8"	""	"574.0"	"645.5"	""	"836"	"22"	"36.000"	"29.000"	"0.264957539305395"	"22"	"0.002683"	"0.04"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.38306"	"1351.75884"	"1351.75968"	"-0.63"	"-0.00042"	"10/54"	"10"	"54"	"18465169.7445068"	"HCD"	"MS2"	"13.66084"	"604.1"	"45.000"	"51.4838"	"15444"	"15444"	"15426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"952.8"	""	"976.8"	""	"943.1"	""	"583.7"	"4.5"	"1079.0"	"1180.2"	""	"836"	"22"	"36.000"	"29.000"	"0.24164414781559"	"14"	"0.001158"	"0.01523"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.4500"	"0.0000"	"1"	"1"	"1"	"451.25781"	"1351.75888"	"1351.75968"	"-0.59"	"-0.00027"	"5/54"	"5"	"54"	"8644290.91937256"	"HCD"	"MS2"	"23.76447"	"289.8"	"100.000"	"51.4517"	"15431"	"15431"	"15410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"486.3"	""	"459.5"	""	"443.4"	""	"286.2"	"0.6"	"510.0"	"557.1"	""	"836"	"20"	"36.000"	"29.000"	"0.380343747960281"	"25"	"0.001966"	"0.02773"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"676.38324"	"1351.75920"	"1351.75968"	"-0.36"	"-0.00024"	"9/54"	"9"	"54"	"20061026.8760986"	"HCD"	"MS2"	"22.45597"	"624.5"	"43.568"	"51.9600"	"15689"	"15689"	"15670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"922.8"	""	"959.5"	""	"959.2"	""	"735.2"	""	"1124.9"	"1222.9"	""	"827"	"20"	"36.000"	"29.000"	"0.399462038462288"	"18"	"0.003197"	"0.06486"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.38336"	"1351.75945"	"1351.75968"	"-0.18"	"-0.00012"	"10/54"	"10"	"54"	"13349531.6213379"	"HCD"	"MS2"	"18.3311"	"882.3"	"100.000"	"51.6494"	"15562"	"15562"	"15542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1436.1"	""	"1435.7"	""	"1378.0"	""	"858.6"	"8.1"	"1595.1"	"1640.6"	""	"826"	"22"	"36.000"	"29.000"	"0.236564760797147"	"14"	"0.0007076"	"0.007055"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"676.38354"	"1351.75981"	"1351.75968"	"0.10"	"0.00006"	"5/54"	"5"	"54"	"16647097.9743652"	"HCD"	"MS2"	"32.34145"	"627.7"	"51.609"	"51.7968"	"15572"	"15572"	"15554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"889.8"	""	"927.6"	""	"956.9"	""	"761.8"	""	"1163.8"	"1258.4"	""	"826"	"16"	"36.000"	"29.000"	"0.933146973101263"	"17"	"0.003197"	"0.06439"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"451.25812"	"1351.75980"	"1351.75968"	"0.09"	"0.00004"	"5/54"	"5"	"54"	"11767601.8141479"	"HCD"	"MS2"	"8.326404"	"381.6"	"100.000"	"51.9256"	"15675"	"15675"	"15654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"586.6"	""	"597.8"	""	"609.3"	""	"375.4"	""	"688.9"	"759.5"	""	"826"	"21"	"36.000"	"29.000"	"0.327303049488435"	"23"	"0.00109"	"0.01475"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGSYLK"	"[K].yYGSYLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"676.38678"	"1351.76628"	"1351.76621"	"0.05"	"0.00004"	"6/48"	"6"	"48"	"5118147.26397705"	"HCD"	"MS2"	"4.31514"	"474.1"	"100.000"	"40.6368"	"11079"	"11079"	"11053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"673.8"	""	"670.0"	""	"709.4"	""	"722.8"	"4.3"	"853.5"	"856.0"	""	"818"	"27"	"36.000"	"29.000"	"0.0848639628639059"	"21"	"0.0005564"	"0.003428"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGSYLK"	"[K].yYGSYLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"676.38690"	"1351.76653"	"1351.76621"	"0.23"	"0.00016"	"6/48"	"6"	"48"	"4819192.23486328"	"HCD"	"MS2"	"5.408758"	"473.7"	"100.000"	"40.4833"	"10972"	"10972"	"10949"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"630.6"	""	"679.3"	""	"685.3"	""	"710.0"	""	"871.8"	"912.3"	""	"829"	"28"	"36.000"	"29.000"	"0.0678460448131827"	"22"	"0.0005564"	"0.003307"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIFGEATK"	"[K].qIFGEATk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"676.40265"	"1351.79802"	"1351.79857"	"-0.41"	"-0.00028"	"7/74"	"7"	"74"	"11199347.7504272"	"HCD"	"MS2"	"0"	"865.2"	"100.000"	"37.9500"	"9936"	"9936"	"9911"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1352.4"	""	"1136.4"	""	"1276.2"	""	"1352.8"	"2.1"	"1564.7"	"1505.4"	""	"573"	"38"	"34.000"	"27.000"	"0.00423764553210192"	"27"	"0.0001889"	"0.0009261"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIFGEATK"	"[K].qIFGEATk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"676.40302"	"1351.79875"	"1351.79857"	"0.13"	"0.00009"	"7/74"	"7"	"74"	"11341010.8642578"	"HCD"	"MS2"	"0"	"830.6"	"100.000"	"38.0594"	"10024"	"10024"	"10001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1289.1"	""	"1098.5"	""	"1245.1"	""	"1302.6"	"6.3"	"1440.7"	"1478.9"	""	"573"	"37"	"34.000"	"27.000"	"0.00534717781424133"	"26"	"0.0001889"	"0.0009024"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVWSFLK"	"[K].nVWSFLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"676.41034"	"1351.81340"	"1351.81383"	"-0.32"	"-0.00021"	"6/60"	"6"	"60"	"3418307.49475098"	"HCD"	"MS2"	"23.97342"	"262.5"	"100.000"	"65.0537"	"20964"	"20964"	"20937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.0"	""	"369.9"	""	"370.8"	""	"462.8"	""	"459.8"	"450.9"	""	"491"	"26"	"33.000"	"26.000"	"0.0558536419254543"	"20"	"0.0005564"	"0.003567"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHK.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8358"	"0.0000"	"1"	"1"	"1"	"451.27951"	"1351.82398"	"1351.82590"	"-1.42"	"-0.00064"	"9/88"	"9"	"88"	"17503885.680542"	"HCD"	"MS2"	"18.92019"	"179.7"	"60.974"	"37.3287"	"9681"	"9681"	"9656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.1"	""	"237.8"	""	"256.7"	""	"314.5"	"2.5"	"336.0"	"346.4"	""	"442"	"67"	"33.000"	"26.000"	"4.60672485164501E-06"	""	"0"	"9.494E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].VVAGVASALAHk.[Y]"	"K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9518"	"0.0000"	"1"	"1"	"1"	"676.41589"	"1351.82451"	"1351.82590"	"-1.03"	"-0.00070"	"10/88"	"10"	"88"	"2156737.49523926"	"HCD"	"MS2"	"11.63128"	"62.4"	"100.000"	"32.4749"	"7745"	"7745"	"7718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.8"	""	"68.7"	""	"77.6"	""	"110.0"	""	"137.3"	"130.2"	""	"452"	"83"	"33.000"	"26.000"	"1.12488581205239E-07"	"21"	"0"	"3.34E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHK.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8226"	"0.0000"	"1"	"1"	"1"	"451.27982"	"1351.82489"	"1351.82590"	"-0.74"	"-0.00034"	"8/88"	"8"	"88"	"19113352.7076416"	"HCD"	"MS2"	"16.60019"	"233.3"	"83.985"	"37.3903"	"9749"	"9749"	"9729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"313.7"	""	"306.9"	""	"306.0"	""	"400.7"	""	"442.0"	"444.6"	""	"452"	"62"	"33.000"	"26.000"	"1.39993682967353E-05"	""	"0"	"1.488E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].VVAGVASALAHk.[Y]"	"K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"451.28003"	"1351.82553"	"1351.82590"	"-0.27"	"-0.00012"	"7/88"	"7"	"88"	"12147129.0489502"	"HCD"	"MS2"	"14.64442"	"353.5"	"100.000"	"32.4404"	"7731"	"7731"	"7702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"415.4"	""	"433.5"	""	"439.6"	""	"630.6"	"0.8"	"740.1"	"696.4"	""	"449"	"52"	"33.000"	"26.000"	"0.00015460244052929"	"16"	"0"	"0.000165"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].VVAGVASALAHk.[Y]"	"K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"451.28046"	"1351.82682"	"1351.82590"	"0.68"	"0.00031"	"6/88"	"6"	"88"	"6927883.57727051"	"HCD"	"MS2"	"6.444447"	"251.6"	"100.000"	"32.2971"	"7629"	"7629"	"7608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.5"	""	"329.8"	""	"328.5"	""	"415.9"	""	"522.3"	"471.2"	""	"420"	"43"	"33.000"	"26.000"	"0.00108198015362169"	"15"	"0.0001889"	"0.0003784"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKPVPIAR"	"[K].lkPVPIAR.[E]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"451.31018"	"1351.91599"	"1351.91896"	"-2.20"	"-0.00099"	"8/70"	"8"	"70"	"40056766.0655518"	"HCD"	"MS2"	"0"	"853.3"	"39.843"	"33.2325"	"8011"	"8011"	"8001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1206.0"	""	"1084.3"	""	"1204.5"	""	"1539.4"	""	"1478.3"	"1569.3"	""	"22"	"2"	"20.000"	"13.000"	"0.63590565214629"	"13"	"0.0006037"	"0.00508"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKPVPIAR"	"[K].lkPVPIAR.[E]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"451.31021"	"1351.91608"	"1351.91896"	"-2.13"	"-0.00096"	"5/70"	"5"	"70"	"42465363.7851563"	"HCD"	"MS2"	"6.445487"	"743.4"	"31.576"	"33.3005"	"8080"	"8080"	"8071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1062.0"	""	"942.6"	""	"1062.9"	""	"1356.9"	"1.9"	"1253.0"	"1357.7"	""	"22"	"3"	"20.000"	"13.000"	"0.598952918126663"	"13"	"0.002651"	"0.03923"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNMPLEK"	"[R].yNMPLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"676.88428"	"1352.76128"	"1352.76483"	"-2.63"	"-0.00178"	"10/58"	"10"	"58"	"6569401.3449707"	"HCD"	"MS2"	"0"	"550.5"	"100.000"	"39.8538"	"10759"	"10759"	"10734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1058.4"	""	"973.7"	""	"736.3"	""	"731.9"	""	"815.9"	"883.9"	""	"776"	"20"	"35.000"	"28.000"	"0.35713443384023"	"24"	"0.0006037"	"0.005825"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].eMPSVFGk.[ED]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"676.88483"	"1352.76238"	"1352.76483"	"-1.81"	"-0.00123"	"6/62"	"6"	"62"	"2045511.22680664"	"HCD"	"MS2"	"18.27171"	"181.1"	"100.000"	"47.3153"	"13749"	"13749"	"13720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.9"	""	"243.3"	""	"245.5"	""	"312.9"	"1.6"	"329.3"	"327.3"	""	"787"	"12"	"35.000"	"28.000"	"2.49427731379601"	"19"	"0.0002277"	"0.00122"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNMPLEK"	"[R].yNMPLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"676.88495"	"1352.76262"	"1352.76483"	"-1.63"	"-0.00110"	"10/58"	"10"	"58"	"7654534.98590088"	"HCD"	"MS2"	"0"	"676.9"	"100.000"	"39.7762"	"10686"	"10686"	"10661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1272.4"	""	"1234.4"	""	"890.6"	""	"896.4"	"1.5"	"1040.3"	"1056.8"	""	"791"	"19"	"35.000"	"28.000"	"0.497905000364593"	"22"	"0.0008453"	"0.008183"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].eMPSVFGk.[ED]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"451.59250"	"1352.76294"	"1352.76483"	"-1.39"	"-0.00063"	"8/62"	"8"	"62"	"2180178.35247803"	"HCD"	"MS2"	"27.23977"	"112.1"	"100.000"	"47.3392"	"13807"	"13807"	"13778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.8"	""	"176.9"	""	"151.0"	""	"145.7"	""	"235.0"	"211.6"	""	"794"	"24"	"35.000"	"28.000"	"0.155880039353641"	"14"	"0.0001889"	"0.0008219"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVIWDK"	"[R].mSVIWDk.[A]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"676.88525"	"1352.76323"	"1352.76483"	"-1.18"	"-0.00080"	"5/56"	"5"	"56"	"19891571.3510132"	"HCD"	"MS2"	"7.720873"	"1294.7"	"100.000"	"41.2885"	"11346"	"11346"	"11325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1746.0"	""	"1651.1"	""	"1845.8"	""	"2663.6"	"0.8"	"2156.6"	"2189.2"	""	"793"	"17"	"35.000"	"28.000"	"0.757256817021514"	"20"	"0.003286"	"0.07449"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVIWDK"	"[R].mSVIWDk.[A]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"2"	"2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"676.88550"	"1352.76372"	"1352.76483"	"-0.82"	"-0.00056"	"10/56"	"10"	"56"	"18775494.805542"	"HCD"	"MS2"	"16.82194"	"1206.3"	"100.000"	"41.1008"	"11225"	"11225"	"11205"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1589.0"	""	"1523.0"	""	"1708.1"	""	"2584.6"	"1.3"	"1985.3"	"2024.4"	""	"806"	"22"	"36.000"	"29.000"	"0.228720475979645"	"22"	"0.00317"	"0.06407"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].eMPSVFGk.[ED]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"451.59277"	"1352.76377"	"1352.76483"	"-0.79"	"-0.00035"	"8/62"	"8"	"62"	"7325023.22747803"	"HCD"	"MS2"	"24.07753"	"316.0"	"100.000"	"46.9918"	"13665"	"13665"	"13634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"474.4"	""	"507.5"	""	"466.5"	""	"393.6"	"3.1"	"576.5"	"570.4"	""	"806"	"22"	"36.000"	"29.000"	"0.277526875426743"	"21"	"0.0003146"	"0.001422"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].eMPSVFGk.[ED]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"451.59332"	"1352.76542"	"1352.76483"	"0.43"	"0.00020"	"8/62"	"8"	"62"	"8889125.0536499"	"HCD"	"MS2"	"20.65242"	"373.0"	"100.000"	"46.7439"	"13515"	"13515"	"13496"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"559.3"	""	"585.2"	""	"524.0"	""	"465.4"	""	"681.7"	"717.7"	""	"774"	"23"	"35.000"	"28.000"	"0.21414649226649"	"22"	"0.0003839"	"0.00187"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].eMPSVFGk.[ED]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"676.88635"	"1352.76543"	"1352.76483"	"0.44"	"0.00030"	"14/62"	"14"	"62"	"15575975.5975342"	"HCD"	"MS2"	"5.669989"	"574.7"	"52.935"	"46.9720"	"13609"	"13609"	"13592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"859.3"	""	"915.6"	""	"821.0"	""	"589.7"	"0.2"	"1067.3"	"1193.7"	""	"774"	"32"	"35.000"	"28.000"	"0.0234266918529764"	"18"	"0.0002723"	"0.001396"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].eMPSVFGk.[ED]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.88647"	"1352.76567"	"1352.76483"	"0.62"	"0.00042"	"6/62"	"6"	"62"	"12747939.7211914"	"HCD"	"MS2"	"7.582563"	"365.0"	"42.539"	"47.2746"	"13780"	"13780"	"13762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"532.3"	""	"568.5"	""	"523.7"	""	"395.9"	"3.3"	"683.3"	"753.3"	""	"770"	"32"	"35.000"	"28.000"	"0.0272559126987893"	"15"	"0.0002277"	"0.001293"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].eMPSVFGk.[ED]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"676.88647"	"1352.76567"	"1352.76483"	"0.62"	"0.00042"	"7/62"	"7"	"62"	"13678678.1985474"	"HCD"	"MS2"	"5.930754"	"948.6"	"100.000"	"46.9712"	"13656"	"13656"	"13634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1465.5"	""	"1565.6"	""	"1377.5"	""	"1026.0"	"0.4"	"1721.9"	"1827.1"	""	"770"	"32"	"35.000"	"28.000"	"0.0263912967184274"	"17"	"0.0001889"	"0.00104"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].eMPSVFGk.[ED]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"676.88654"	"1352.76579"	"1352.76483"	"0.71"	"0.00048"	"7/62"	"7"	"62"	"9381561.04693604"	"HCD"	"MS2"	"9.140144"	"655.2"	"100.000"	"46.6750"	"13487"	"13487"	"13464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1010.9"	""	"1081.1"	""	"969.4"	""	"733.4"	""	"1199.6"	"1212.5"	""	"770"	"33"	"35.000"	"28.000"	"0.0176384626385095"	"21"	"0.0002277"	"0.001245"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIADAFTK"	"[K].eIADAFTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"676.89288"	"1352.77849"	"1352.78259"	"-3.03"	"-0.00205"	"7/68"	"7"	"68"	"2843711.50970459"	"HCD"	"MS2"	"0"	"257.3"	"100.000"	"43.0421"	"12062"	"12062"	"12035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"403.6"	""	"346.4"	""	"366.4"	""	"424.9"	""	"423.1"	"474.9"	""	"720"	"40"	"35.000"	"28.000"	"0.00328323902168127"	"26"	"0.0001889"	"0.0004715"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"676.89441"	"1352.78154"	"1352.78259"	"-0.77"	"-0.00052"	"11/62"	"11"	"62"	"2428966.39575195"	"HCD"	"MS2"	"15.53511"	"212.9"	"100.000"	"37.7611"	"9902"	"9902"	"9873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.6"	""	"261.7"	""	"293.0"	""	"355.3"	"1.7"	"397.3"	"421.9"	""	"683"	"32"	"35.000"	"28.000"	"0.0208636701505253"	"23"	"0.0001889"	"0.0004241"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"676.89453"	"1352.78179"	"1352.78259"	"-0.59"	"-0.00040"	"12/62"	"12"	"62"	"5053830.09686279"	"HCD"	"MS2"	"10.15475"	"430.2"	"100.000"	"37.6060"	"9795"	"9795"	"9768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"612.6"	""	"545.4"	""	"598.8"	""	"690.6"	""	"760.1"	"877.5"	""	"681"	"35"	"35.000"	"28.000"	"0.0105224559477088"	"24"	"0.0001889"	"0.0006302"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEMSTSK"	"[K].iVEMSTSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"676.89514"	"1352.78301"	"1352.78596"	"-2.18"	"-0.00148"	"7/64"	"7"	"64"	"4719329.93774414"	"HCD"	"MS2"	"28.07517"	"351.3"	"100.000"	"37.2989"	"9669"	"9669"	"9640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"585.5"	""	"509.5"	""	"476.1"	""	"388.8"	""	"619.4"	"752.8"	""	"686"	"32"	"35.000"	"28.000"	"0.0202905640522187"	"18"	"0.0001889"	"0.0007403"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEMSTSK"	"[K].iVEMSTSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"676.89618"	"1352.78508"	"1352.78596"	"-0.65"	"-0.00044"	"7/64"	"7"	"64"	"4556982.25549316"	"HCD"	"MS2"	"0"	"348.8"	"100.000"	"37.4402"	"9770"	"9770"	"9745"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"577.8"	""	"499.6"	""	"474.9"	""	"368.3"	""	"640.9"	"747.4"	""	"672"	"32"	"35.000"	"28.000"	"0.0204804397472697"	"20"	"0.0001889"	"0.0007857"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTGNQISK"	"[R].fTGNQISk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3MIF4"	"Xylulose kinase OS=Rattus norvegicus OX=10116 GN=Xylb PE=2 SV=1"	"Q3MIF4"	"Xylulose kinase OS=Rattus norvegicus OX=10116 GN=Xylb PE=2 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"676.90021"	"1352.79314"	"1352.79382"	"-0.50"	"-0.00034"	"7/74"	"7"	"74"	"1038663.62976074"	"HCD"	"MS2"	"11.36749"	"112.1"	"100.000"	"35.0497"	"8789"	"8789"	"8762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.0"	""	"147.5"	""	"155.0"	""	"170.1"	"4.4"	"198.4"	"206.7"	""	"635"	"16"	"35.000"	"28.000"	"0.777577579285707"	"18"	"0.0002277"	"0.001205"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTGNQISK"	"[R].fTGNQISk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3MIF4"	"Xylulose kinase OS=Rattus norvegicus OX=10116 GN=Xylb PE=2 SV=1"	"Q3MIF4"	"Xylulose kinase OS=Rattus norvegicus OX=10116 GN=Xylb PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"676.90033"	"1352.79338"	"1352.79382"	"-0.32"	"-0.00022"	"12/74"	"12"	"74"	"940730.977966309"	"HCD"	"MS2"	"0"	"102.9"	"100.000"	"35.0150"	"8732"	"8732"	"8702"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.3"	""	"135.3"	""	"148.1"	""	"144.1"	"4.5"	"193.8"	"195.9"	""	"631"	"10"	"34.000"	"28.000"	"2.92414809276185"	"15"	"0.002265"	"0.03327"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAWVLDK"	"[K].yAWVLDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"676.90198"	"1352.79668"	"1352.79784"	"-0.86"	"-0.00058"	"12/48"	"12"	"48"	"7748993.00982666"	"HCD"	"MS2"	"36.40716"	"566.9"	"100.000"	"55.7202"	"17209"	"17209"	"17189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"670.4"	""	"614.2"	""	"715.0"	""	"1141.3"	""	"1159.4"	"1081.5"	""	"623"	"33"	"34.000"	"27.000"	"0.0151167367800501"	"25"	"0.000523"	"0.002975"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAWVLDK"	"[K].yAWVLDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"676.90283"	"1352.79839"	"1352.79784"	"0.40"	"0.00027"	"12/48"	"12"	"48"	"7484736.37408447"	"HCD"	"MS2"	"37.50466"	"554.9"	"100.000"	"55.5161"	"17072"	"17072"	"17051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"602.7"	""	"629.5"	""	"717.8"	""	"1124.9"	""	"1135.0"	"1066.7"	""	"635"	"31"	"35.000"	"28.000"	"0.0230538641485662"	"24"	"0.000523"	"0.003012"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVADFMAK"	"[K].lVADFMAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"676.90356"	"1352.79985"	"1352.80121"	"-1.01"	"-0.00068"	"14/56"	"14"	"56"	"5782359.36193848"	"HCD"	"MS2"	"20.11172"	"418.8"	"100.000"	"58.5597"	"18316"	"18316"	"18297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"832.4"	""	"793.1"	""	"769.4"	""	"365.8"	""	"576.8"	"614.0"	""	"627"	"47"	"34.000"	"27.000"	"0.000604279060285358"	"18"	"0.0001889"	"0.0005472"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVADFMAK"	"[K].lVADFMAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"676.90393"	"1352.80058"	"1352.80121"	"-0.47"	"-0.00032"	"7/56"	"7"	"56"	"6774942.12744141"	"HCD"	"MS2"	"10.48927"	"480.8"	"100.000"	"58.7410"	"18440"	"18440"	"18421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"977.5"	""	"883.8"	""	"887.4"	""	"428.0"	"4.9"	"655.5"	"694.4"	""	"585"	"42"	"34.000"	"27.000"	"0.00192808364358964"	"16"	"0.0001889"	"0.0006189"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVADFMAK"	"[K].lVADFMAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"676.90405"	"1352.80083"	"1352.80121"	"-0.29"	"-0.00019"	"7/56"	"7"	"56"	"1383530.25823975"	"HCD"	"MS2"	"6.14494"	"127.4"	"100.000"	"59.0695"	"18573"	"18573"	"18549"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.0"	""	"208.0"	""	"210.2"	""	"165.9"	""	"204.1"	"210.8"	""	"583"	"46"	"34.000"	"27.000"	"0.000684917967277282"	"22"	"0.0001308"	"0.0002172"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVADFMAK"	"[K].lVADFMAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"676.90442"	"1352.80156"	"1352.80121"	"0.26"	"0.00017"	"7/56"	"7"	"56"	"1728929.63024902"	"HCD"	"MS2"	"14.25859"	"151.3"	"100.000"	"58.8821"	"18444"	"18444"	"18425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.8"	""	"257.2"	""	"266.9"	""	"169.7"	"1.8"	"233.5"	"250.0"	""	"580"	"42"	"34.000"	"27.000"	"0.00202954178840659"	"21"	"0.0001308"	"0.0003009"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVHGGILNK"	"[R].gVHGGILNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"M0RCP6"	"Profilin-3 OS=Rattus norvegicus OX=10116 GN=Pfn3 PE=2 SV=1"	"M0RCP6"	"Profilin-3 OS=Rattus norvegicus OX=10116 GN=Pfn3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.92285"	"1352.83843"	"1352.84144"	"-2.23"	"-0.00151"	"6/68"	"6"	"68"	"505021.366271973"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"29.4522"	"6467"	"6467"	"6438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.9"	""	"58.7"	""	"76.2"	""	"69.1"	"2.7"	"113.0"	"100.6"	""	"264"	"18"	"31.000"	"24.000"	"0.227810601742707"	"14"	"0.0002277"	"0.001225"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVHGGILNK"	"[R].gVHGGILNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"M0RCP6"	"Profilin-3 OS=Rattus norvegicus OX=10116 GN=Pfn3 PE=2 SV=1"	"M0RCP6"	"Profilin-3 OS=Rattus norvegicus OX=10116 GN=Pfn3 PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"676.92480"	"1352.84233"	"1352.84144"	"0.66"	"0.00045"	"7/68"	"7"	"68"	"504405.612487793"	"HCD"	"MS2"	"0"	"50.5"	"100.000"	"29.4964"	"6526"	"6526"	"6500"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.1"	""	"67.3"	""	"73.5"	""	"67.3"	"0.7"	"102.0"	"106.8"	""	"251"	"21"	"30.000"	"23.000"	"0.102245387644615"	"19"	"0.0001889"	"0.000667"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDVALNLLR"	"[K].lPDVALNLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.92609"	"1352.84490"	"1352.84630"	"-1.04"	"-0.00070"	"7/78"	"7"	"78"	"2886401.31774902"	"HCD"	"MS2"	"35.09761"	"109.6"	"100.000"	"72.7007"	"24129"	"24129"	"24111"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.0"	""	"126.1"	""	"140.5"	""	"190.0"	""	"226.6"	"229.4"	""	"242"	"27"	"30.000"	"23.000"	"0.0225312543536207"	"14"	"0.0001889"	"0.0005002"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDVALNLLR"	"[K].lPDVALNLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.92676"	"1352.84624"	"1352.84630"	"-0.05"	"-0.00003"	"5/78"	"5"	"78"	"2579031.34265137"	"HCD"	"MS2"	"30.89075"	"105.9"	"100.000"	"72.7190"	"24085"	"24085"	"24065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.5"	""	"126.6"	""	"131.7"	""	"184.4"	""	"223.1"	"204.5"	""	"196"	"27"	"29.000"	"22.000"	"0.0198712906513086"	"14"	"0.0001889"	"0.0004493"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFFLQVK"	"[KR].lFFLQVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"676.93756"	"1352.86785"	"1352.87062"	"-2.05"	"-0.00138"	"12/54"	"12"	"54"	"7173774.5501709"	"HCD"	"MS2"	"5.590501"	"370.8"	"100.000"	"71.3518"	"23579"	"23579"	"23562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.1"	""	"484.4"	""	"553.6"	""	"676.6"	"4.5"	"636.0"	"733.2"	""	"127"	"18"	"28.000"	"21.000"	"0.106604055150783"	"16"	"0.002711"	"0.04125"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFFLQVK"	"[KR].lFFLQVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"451.62766"	"1352.86841"	"1352.87062"	"-1.63"	"-0.00073"	"5/54"	"5"	"54"	"1140633.91149902"	"HCD"	"MS2"	"0"	"50.9"	"100.000"	"71.1813"	"23509"	"23509"	"23482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.5"	""	"67.7"	""	"74.5"	""	"97.6"	""	"93.9"	"99.0"	""	"127"	"22"	"28.000"	"21.000"	"0.0390637314170766"	"20"	"0.002804"	"0.04535"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFFLQVK"	"[KR].lFFLQVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"451.62772"	"1352.86859"	"1352.87062"	"-1.49"	"-0.00067"	"5/54"	"5"	"54"	"1561913.64105225"	"HCD"	"MS2"	"0"	"62.1"	"100.000"	"71.2497"	"23485"	"23485"	"23459"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.3"	""	"86.2"	""	"87.9"	""	"121.9"	"0.4"	"110.9"	"117.5"	""	"123"	"22"	"27.000"	"20.000"	"0.0368023130962097"	"17"	"0.0006737"	"0.006553"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFFLQVK"	"[KR].lFFLQVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"676.93799"	"1352.86870"	"1352.87062"	"-1.42"	"-0.00096"	"6/54"	"6"	"54"	"3774478.26177979"	"HCD"	"MS2"	"12.18622"	"267.5"	"100.000"	"71.0479"	"23454"	"23454"	"23434"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.7"	""	"362.3"	""	"376.6"	""	"503.1"	"0.4"	"465.4"	"523.8"	""	"123"	"43"	"27.000"	"20.000"	"0.000339527625157666"	"19"	"0.0006737"	"0.006639"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFFLQVK"	"[KR].lFFLQVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"676.93805"	"1352.86882"	"1352.87062"	"-1.33"	"-0.00090"	"12/54"	"12"	"54"	"8421693.76580811"	"HCD"	"MS2"	"3.088155"	"461.5"	"100.000"	"71.3878"	"23541"	"23541"	"23523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"546.4"	""	"613.2"	""	"672.4"	""	"814.3"	"13.7"	"779.7"	"933.2"	""	"123"	"19"	"27.000"	"20.000"	"0.0719242125477221"	"15"	"0.002711"	"0.04122"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFFLQVK"	"[KR].lFFLQVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"676.93835"	"1352.86943"	"1352.87062"	"-0.87"	"-0.00059"	"6/54"	"6"	"54"	"3023388.86688232"	"HCD"	"MS2"	"12.60878"	"228.7"	"100.000"	"71.0975"	"23423"	"23423"	"23395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.6"	""	"315.2"	""	"326.4"	""	"435.5"	""	"404.4"	"427.1"	""	"123"	"40"	"27.000"	"20.000"	"0.000665081880048232"	"18"	"0.0006037"	"0.003879"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQTFADK"	"[R].sVQTFADk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"677.38458"	"1353.76189"	"1353.77784"	"-11.78"	"-0.00797"	"6/78"	"6"	"78"	"1247717.53479004"	"HCD"	"MS2"	"0"	"131.3"	"100.000"	"35.1620"	"8835"	"8835"	"8810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"189.6"	""	"161.7"	""	"184.0"	""	"204.9"	"1.1"	"249.3"	"253.5"	""	"725"	"22"	"35.000"	"28.000"	"0.205261742276367"	"21"	"0.0003146"	"0.001472"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WASQYLK"	"[K].wASQYLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"677.40002"	"1353.79277"	"1353.79309"	"-0.24"	"-0.00016"	"6/54"	"6"	"54"	"7952247.17657471"	"HCD"	"MS2"	"12.59104"	"618.2"	"100.000"	"45.1494"	"12916"	"12916"	"12891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"874.1"	""	"799.7"	""	"876.1"	""	"1136.3"	""	"1036.7"	"1136.7"	""	"621"	"29"	"34.000"	"27.000"	"0.0376757238069375"	"23"	"0.0006037"	"0.005057"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WASQYLK"	"[K].wASQYLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"677.40070"	"1353.79411"	"1353.79309"	"0.75"	"0.00051"	"6/54"	"6"	"54"	"7919548.46630859"	"HCD"	"MS2"	"3.349283"	"649.9"	"100.000"	"44.9221"	"12774"	"12774"	"12752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"958.5"	""	"828.4"	""	"890.6"	""	"1197.6"	"5.4"	"1063.4"	"1207.4"	""	"614"	"29"	"34.000"	"27.000"	"0.0372510377092748"	"23"	"0.0006037"	"0.00611"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEELYTK"	"[R].lEELYTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"677.40100"	"1353.79473"	"1353.80299"	"-6.10"	"-0.00413"	"6/56"	"6"	"56"	"2091122.16046143"	"HCD"	"MS2"	"0"	"202.1"	"100.000"	"45.7143"	"13146"	"13146"	"13134"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.3"	""	"255.3"	""	"294.5"	""	"337.9"	""	"399.5"	"379.6"	""	"613"	"28"	"34.000"	"27.000"	"0.0468198996849969"	"20"	"0.0006037"	"0.003992"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFFLDLK"	"[R].lFFLDLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"677.43048"	"1353.85369"	"1353.85463"	"-0.70"	"-0.00047"	"6/48"	"6"	"48"	"443028.260375977"	"HCD"	"MS2"	"20.17673"	"40.7"	"100.000"	"80.2332"	"27140"	"27140"	"27121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.5"	""	"45.2"	""	"57.3"	""	"63.4"	""	"92.0"	"74.1"	""	"222"	"26"	"30.000"	"23.000"	"0.0276263162329346"	""	"0.0001889"	"0.0007182"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFFLDLK"	"[R].lFFLDLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"677.43079"	"1353.85430"	"1353.85463"	"-0.25"	"-0.00017"	"6/48"	"6"	"48"	"514789.686401367"	"HCD"	"MS2"	"18.65162"	"46.9"	"100.000"	"80.1519"	"27158"	"27158"	"27135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.5"	""	"58.0"	""	"68.1"	""	"75.5"	""	"99.3"	"96.7"	""	"222"	"31"	"30.000"	"23.000"	"0.00987013240822323"	""	"0.0003839"	"0.001684"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPLYVLK"	"[K].yPLYVLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQV9"	"Carboxypeptidase B2 OS=Rattus norvegicus OX=10116 GN=Cpb2 PE=2 SV=1"	"Q9EQV9"	"Carboxypeptidase B2 OS=Rattus norvegicus OX=10116 GN=Cpb2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.43127"	"1353.85527"	"1353.85463"	"0.47"	"0.00032"	"6/50"	"6"	"50"	"5769944.37799072"	"HCD"	"MS2"	"5.318344"	"381.1"	"100.000"	"56.4287"	"17499"	"17499"	"17477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"549.7"	""	"568.7"	""	"539.5"	""	"601.0"	""	"659.1"	"694.0"	""	"217"	"17"	"30.000"	"23.000"	"0.220003575068059"	"14"	"0.001912"	"0.02687"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPLYVLK"	"[K].yPLYVLk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQV9"	"Carboxypeptidase B2 OS=Rattus norvegicus OX=10116 GN=Cpb2 PE=2 SV=1"	"Q9EQV9"	"Carboxypeptidase B2 OS=Rattus norvegicus OX=10116 GN=Cpb2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.43182"	"1353.85637"	"1353.85463"	"1.29"	"0.00087"	"6/50"	"6"	"50"	"5279910.05096436"	"HCD"	"MS2"	"2.74222"	"379.0"	"100.000"	"56.2582"	"17375"	"17375"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"531.5"	""	"543.3"	""	"498.3"	""	"631.8"	""	"695.9"	"695.8"	""	"218"	"24"	"30.000"	"23.000"	"0.0389427393585603"	"14"	"0.001846"	"0.02561"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPIPTLK"	"[RK].nIPIPTLk.[AE]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P70567"	"Tropomodulin-1 OS=Rattus norvegicus OX=10116 GN=Tmod1 PE=2 SV=1"	"P70567; P70566"	"Tropomodulin-1 OS=Rattus norvegicus OX=10116 GN=Tmod1 PE=2 SV=1; Tropomodulin-2 OS=Rattus norvegicus OX=10116 GN=Tmod2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.44647"	"1353.88567"	"1353.88699"	"-0.98"	"-0.00066"	"7/70"	"7"	"70"	"3176078.29278564"	"HCD"	"MS2"	"17.9337"	"222.8"	"100.000"	"53.1478"	"16175"	"16175"	"16150"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.4"	""	"300.2"	"2.2"	"311.2"	""	"365.2"	""	"414.0"	"454.6"	""	"101"	"31"	"27.000"	"20.000"	"0.00414277529886558"	"14"	"0.001058"	"0.01446"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIFDTVDIR"	"[K].fIFDTVDIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"677.88165"	"1354.75603"	"1354.75682"	"-0.58"	"-0.00039"	"10/70"	"10"	"70"	"5323248.36157227"	"HCD"	"MS2"	"2.586704"	"253.9"	"100.000"	"66.8882"	"21765"	"21765"	"21747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.8"	""	"361.1"	""	"364.1"	""	"448.4"	"2.5"	"441.5"	"477.3"	""	"701"	"54"	"35.000"	"28.000"	"0.000136989733975237"	""	"0.0001308"	"0.0003071"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIFDTVDIR"	"[K].fIFDTVDIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"677.88171"	"1354.75615"	"1354.75682"	"-0.49"	"-0.00033"	"6/70"	"6"	"70"	"24232083.5560913"	"HCD"	"MS2"	"0.3795431"	"585.6"	"66.518"	"66.5700"	"21636"	"21636"	"21619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"779.0"	""	"896.0"	""	"895.3"	""	"932.7"	""	"957.8"	"1086.1"	""	"701"	"51"	"35.000"	"28.000"	"0.000311664991809211"	""	"0.0001889"	"0.0004631"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NFIDSFLIR"	"[R].nFIDSFLIR.[M]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"2"	"P11711"	"Cytochrome P450 2A1 OS=Rattus norvegicus OX=10116 GN=Cyp2a1 PE=1 SV=2"	"P11711; P15149"	"Cytochrome P450 2A1 OS=Rattus norvegicus OX=10116 GN=Cyp2a1 PE=1 SV=2; Cytochrome P450 2A2 OS=Rattus norvegicus OX=10116 GN=Cyp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.0488"	"0.0000"	"1"	"1"	"1"	"677.88184"	"1354.75640"	"1354.75682"	"-0.31"	"-0.00021"	"7/82"	"7"	"82"	"1284047.09698486"	"HCD"	"MS2"	"18.58636"	"69.9"	"100.000"	"75.2357"	"25112"	"25112"	"25089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.0"	""	"140.4"	""	"112.9"	""	"83.2"	"0.8"	"119.8"	"94.2"	""	"703"	"41"	"35.000"	"28.000"	"0.00279850011671687"	""	"0"	"3.109E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DFIDSFLIR"	"[].dFIDSFLIR.[]"	"N-Term(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0488"	"2"	"2"	"2"	"677.88184"	"1354.75640"	"1354.75682"	"-0.31"	"-0.00021"	"7/72"	"7"	"72"	"1284047.09698486"	"HCD"	"MS2"	"18.58636"	"69.9"	"100.000"	"75.2357"	"25112"	"25112"	"25089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.0"	""	"140.4"	""	"112.9"	""	"83.2"	"0.8"	"119.8"	"94.2"	""	"703"	"39"	"35.000"	"28.000"	"0.00474160453230966"	""	"0"	"3.067E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIFDTVDIR"	"[K].fIFDTVDIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"677.88184"	"1354.75640"	"1354.75682"	"-0.31"	"-0.00021"	"6/70"	"6"	"70"	"22355244.4952393"	"HCD"	"MS2"	"1.965619"	"657.5"	"77.017"	"66.6353"	"21610"	"21610"	"21593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"833.0"	""	"960.2"	""	"1019.5"	""	"1088.0"	"1.8"	"1075.0"	"1246.6"	""	"703"	"50"	"35.000"	"28.000"	"0.000313996877532253"	""	"0.0001889"	"0.0005076"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIFDTVDIR"	"[K].fIFDTVDIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"677.88190"	"1354.75652"	"1354.75682"	"-0.22"	"-0.00015"	"6/70"	"6"	"70"	"5173245.66967773"	"HCD"	"MS2"	"1.866687"	"233.4"	"99.900"	"66.9555"	"21740"	"21740"	"21721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"275.2"	""	"328.6"	""	"331.6"	""	"396.4"	"1.8"	"416.8"	"462.4"	""	"703"	"50"	"35.000"	"28.000"	"0.000336453716060138"	""	"0.0001308"	"0.0002347"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NFIDSFLIR"	"[R].nFIDSFLIR.[M]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"2"	"P11711"	"Cytochrome P450 2A1 OS=Rattus norvegicus OX=10116 GN=Cyp2a1 PE=1 SV=2"	"P11711; P15149"	"Cytochrome P450 2A1 OS=Rattus norvegicus OX=10116 GN=Cyp2a1 PE=1 SV=2; Cytochrome P450 2A2 OS=Rattus norvegicus OX=10116 GN=Cyp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.0488"	"0.0000"	"1"	"1"	"1"	"677.88220"	"1354.75713"	"1354.75682"	"0.23"	"0.00015"	"7/82"	"7"	"82"	"1300532.09204102"	"HCD"	"MS2"	"31.5135"	"68.9"	"100.000"	"75.2147"	"25155"	"25155"	"25135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.9"	""	"136.5"	""	"115.4"	""	"72.2"	"2.4"	"124.7"	"94.1"	""	"703"	"41"	"35.000"	"28.000"	"0.00275375519432323"	""	"0"	"3.909E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DFIDSFLIR"	"[].dFIDSFLIR.[]"	"N-Term(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0488"	"2"	"2"	"2"	"677.88220"	"1354.75713"	"1354.75682"	"0.23"	"0.00015"	"7/72"	"7"	"72"	"1300532.09204102"	"HCD"	"MS2"	"31.5135"	"68.9"	"100.000"	"75.2147"	"25155"	"25155"	"25135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.9"	""	"136.5"	""	"115.4"	""	"72.2"	"2.4"	"124.7"	"94.1"	""	"703"	"39"	"35.000"	"28.000"	"0.00467654727919299"	""	"0"	"3.928E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLYTEVTR"	"[K].mLLYTEVTR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"677.88312"	"1354.75896"	"1354.76019"	"-0.91"	"-0.00062"	"7/70"	"7"	"70"	"7902546.19641113"	"HCD"	"MS2"	"21.74013"	"433.3"	"100.000"	"49.0283"	"14497"	"14497"	"14479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"622.4"	""	"717.1"	""	"720.6"	""	"546.5"	""	"719.4"	"776.0"	""	"683"	"46"	"35.000"	"28.000"	"0.000795043164492601"	"25"	"0.0001859"	"0.0003355"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLYTEVTR"	"[K].mLLYTEVTR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"677.88373"	"1354.76018"	"1354.76019"	"-0.01"	"0.00000"	"7/70"	"7"	"70"	"7968892.98291016"	"HCD"	"MS2"	"19.2084"	"447.7"	"100.000"	"48.7601"	"14340"	"14340"	"14319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"662.6"	""	"751.8"	""	"749.2"	""	"537.2"	"2.4"	"756.8"	"774.8"	""	"667"	"37"	"35.000"	"28.000"	"0.00605474473534841"	"22"	"0.0001889"	"0.0005786"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTIFTDAK"	"[K].tTIFTDAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"677.90192"	"1354.79656"	"1354.79824"	"-1.24"	"-0.00084"	"12/66"	"12"	"66"	"5586177.52435303"	"HCD"	"MS2"	"19.08537"	"478.8"	"100.000"	"40.0072"	"10822"	"10822"	"10797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"732.8"	""	"669.8"	""	"695.4"	""	"687.5"	""	"819.1"	"937.1"	""	"489"	"31"	"33.000"	"26.000"	"0.0182086967620014"	"19"	"0.0001889"	"0.001032"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDYTTAK"	"[K].vVDYTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"677.90198"	"1354.79668"	"1354.79824"	"-1.15"	"-0.00078"	"14/62"	"14"	"62"	"2926301.02972412"	"HCD"	"MS2"	"23.12796"	"250.3"	"100.000"	"35.7583"	"9080"	"9080"	"9049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"361.8"	""	"323.3"	""	"337.0"	""	"403.6"	"1.9"	"458.9"	"485.3"	""	"489"	"43"	"33.000"	"26.000"	"0.001328247060499"	"17"	"0.0001889"	"0.0003851"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTIFTDAK"	"[K].tTIFTDAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"677.90222"	"1354.79717"	"1354.79824"	"-0.79"	"-0.00054"	"14/66"	"14"	"66"	"5464716.04876709"	"HCD"	"MS2"	"22.18547"	"475.5"	"100.000"	"39.9003"	"10734"	"10734"	"10709"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"690.8"	""	"703.8"	""	"692.7"	""	"706.3"	""	"810.9"	"908.4"	""	"489"	"31"	"33.000"	"26.000"	"0.0204775909480023"	"24"	"0.0002277"	"0.001299"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDYTTAK"	"[K].vVDYTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"677.90259"	"1354.79790"	"1354.79824"	"-0.25"	"-0.00017"	"7/62"	"7"	"62"	"1779509.722229"	"HCD"	"MS2"	"6.580965"	"172.6"	"100.000"	"35.7423"	"9030"	"9030"	"9003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.3"	""	"212.7"	""	"230.7"	""	"282.1"	"0.2"	"337.3"	"341.6"	""	"495"	"39"	"33.000"	"26.000"	"0.00338512884334972"	"22"	"0.0001859"	"0.0003346"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDFGFAK"	"[K].lVDFGFAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64595"	"cGMP-dependent protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Prkg2 PE=1 SV=1"	"Q64595"	"cGMP-dependent protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Prkg2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"677.90997"	"1354.81267"	"1354.81349"	"-0.61"	"-0.00041"	"7/56"	"7"	"56"	"4165545.37432861"	"HCD"	"MS2"	"25.40807"	"285.1"	"100.000"	"62.0749"	"19800"	"19800"	"19779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"429.8"	""	"453.3"	""	"407.0"	""	"431.4"	"0.0"	"477.8"	"498.3"	""	"438"	"28"	"33.000"	"26.000"	"0.0345496868064157"	"22"	"0.0001889"	"0.0007411"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDFGFAK"	"[K].lVDFGFAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64595"	"cGMP-dependent protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Prkg2 PE=1 SV=1"	"Q64595"	"cGMP-dependent protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Prkg2 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"677.91003"	"1354.81279"	"1354.81349"	"-0.52"	"-0.00035"	"7/56"	"7"	"56"	"5468698.24359131"	"HCD"	"MS2"	"18.61654"	"365.4"	"100.000"	"61.9802"	"19708"	"19708"	"19689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"533.4"	""	"579.2"	""	"536.2"	""	"555.1"	""	"625.9"	"628.3"	""	"438"	"30"	"33.000"	"26.000"	"0.0225135569289698"	"22"	"0.0001889"	"0.0009729"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVADGIFK"	"[K].fVADGIFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"452.27594"	"1354.81327"	"1354.81349"	"-0.17"	"-0.00008"	"6/56"	"6"	"56"	"2346342.17272949"	"HCD"	"MS2"	"13.23994"	"109.8"	"100.000"	"57.0672"	"17760"	"17760"	"17733"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.7"	""	"163.1"	"3.0"	"167.9"	""	"173.4"	""	"214.0"	"189.6"	""	"438"	"35"	"33.000"	"26.000"	"0.00624373000583356"	"22"	"0.0002723"	"0.001384"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVADGIFK"	"[K].fVADGIFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"677.91046"	"1354.81365"	"1354.81349"	"0.11"	"0.00008"	"7/56"	"7"	"56"	"13473696.4063721"	"HCD"	"MS2"	"11.53011"	"1055.7"	"100.000"	"56.9635"	"17718"	"17718"	"17701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1411.9"	""	"1533.2"	""	"1640.8"	""	"1739.1"	""	"1937.5"	"1735.4"	""	"436"	"44"	"33.000"	"26.000"	"0.000936389410347454"	"24"	"0.0003146"	"0.001408"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVADGIFK"	"[K].fVADGIFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"677.91058"	"1354.81389"	"1354.81349"	"0.29"	"0.00020"	"7/56"	"7"	"56"	"12819303.1435547"	"HCD"	"MS2"	"10.33605"	"964.6"	"100.000"	"56.7585"	"17580"	"17580"	"17563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1335.0"	""	"1394.6"	""	"1535.4"	""	"1548.9"	""	"1753.0"	"1570.3"	""	"444"	"44"	"33.000"	"26.000"	"0.000927583413955501"	"24"	"0.0002723"	"0.001384"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYVSGLMK"	"[R].vYVSGLMk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"677.91229"	"1354.81731"	"1354.81687"	"0.33"	"0.00022"	"7/56"	"7"	"56"	"3450002.08831787"	"HCD"	"MS2"	"14.98818"	"280.5"	"100.000"	"47.3845"	"13777"	"13777"	"13752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"411.8"	""	"404.1"	""	"416.4"	""	"337.9"	"3.0"	"517.9"	"567.5"	""	"423"	"43"	"33.000"	"26.000"	"0.00102875124003744"	"21"	"0.0001889"	"0.0004943"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYVSGLMK"	"[R].vYVSGLMk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"677.91309"	"1354.81890"	"1354.81687"	"1.50"	"0.00102"	"7/56"	"7"	"56"	"4111644.27349854"	"HCD"	"MS2"	"33.28238"	"322.5"	"100.000"	"47.6088"	"13917"	"13917"	"13890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"494.9"	""	"475.3"	""	"484.2"	""	"357.3"	""	"590.5"	"654.2"	""	"423"	"43"	"33.000"	"26.000"	"0.00104306259536469"	"21"	"0.0001889"	"0.0005648"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSLYTVK"	"[K].sVSLYTVk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"677.92004"	"1354.83281"	"1354.83462"	"-1.34"	"-0.00091"	"7/66"	"7"	"66"	"4226995.91485596"	"HCD"	"MS2"	"0"	"349.9"	"100.000"	"40.8711"	"11131"	"11131"	"11109"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"512.5"	""	"523.0"	""	"567.1"	""	"544.3"	""	"577.2"	"586.5"	""	"345"	"37"	"32.000"	"25.000"	"0.0034577142472049"	"24"	"0.0001889"	"0.0007305"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSLYTVK"	"[K].sVSLYTVk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"677.92059"	"1354.83391"	"1354.83462"	"-0.53"	"-0.00036"	"7/66"	"7"	"66"	"4139611.5880127"	"HCD"	"MS2"	"0"	"346.9"	"100.000"	"41.0360"	"11243"	"11243"	"11213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"510.2"	""	"511.3"	""	"554.0"	""	"523.0"	""	"574.9"	"609.4"	""	"337"	"34"	"32.000"	"25.000"	"0.00713838397793477"	"20"	"0.0002277"	"0.001284"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAFIAHPK"	"[R].lAFIAHPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"452.29111"	"1354.85877"	"1354.86111"	"-1.73"	"-0.00078"	"6/58"	"6"	"58"	"37634129.5217285"	"HCD"	"MS2"	"7.701283"	"432.8"	"33.748"	"38.3273"	"10134"	"10134"	"10113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"623.3"	""	"704.8"	""	"731.9"	""	"766.3"	"4.5"	"728.6"	"528.8"	""	"214"	"34"	"30.000"	"23.000"	"0.00393898001797508"	"17"	"0.0003839"	"0.001611"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAFIAHPK"	"[R].lAFIAHPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"452.29141"	"1354.85968"	"1354.86111"	"-1.05"	"-0.00048"	"6/58"	"6"	"58"	"37277315.3162842"	"HCD"	"MS2"	"7.267538"	"489.2"	"38.246"	"38.2138"	"10044"	"10044"	"10023"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"697.1"	""	"816.4"	""	"824.1"	""	"842.4"	"2.7"	"827.4"	"612.0"	""	"206"	"36"	"30.000"	"23.000"	"0.00232721884332761"	"17"	"0.0001889"	"0.0009123"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"678.36603"	"1355.72478"	"1355.72691"	"-1.58"	"-0.00107"	"6/72"	"6"	"72"	"11433728.0743408"	"HCD"	"MS2"	"0"	"454.5"	"100.000"	"35.2009"	"8808"	"8808"	"8779"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"497.1"	""	"427.0"	""	"524.5"	""	"872.1"	""	"1020.3"	"990.9"	""	"699"	"32"	"35.000"	"28.000"	"0.0240130419784974"	"25"	"0.0001889"	"0.0007221"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"452.57983"	"1355.72495"	"1355.72691"	"-1.45"	"-0.00066"	"8/72"	"8"	"72"	"136660904.54248"	"HCD"	"MS2"	"11.82646"	"316.6"	"25.999"	"35.2262"	"8861"	"8861"	"8842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.2"	"37.8"	"294.6"	""	"332.7"	""	"616.2"	""	"702.4"	"709.0"	""	"703"	"40"	"35.000"	"28.000"	"0.00324283856644899"	"23"	"0.0001889"	"0.0008506"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"678.36646"	"1355.72563"	"1355.72691"	"-0.95"	"-0.00064"	"7/72"	"7"	"72"	"1465563.19177246"	"HCD"	"MS2"	"0"	"119.9"	"100.000"	"35.5058"	"8933"	"8933"	"8907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.8"	""	"155.3"	""	"164.1"	""	"190.1"	""	"249.4"	"224.9"	""	"718"	"10"	"35.000"	"28.000"	"3.29681402137606"	"15"	"0.0007793"	"0.007362"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58011"	"1355.72577"	"1355.72691"	"-0.84"	"-0.00038"	"7/72"	"7"	"72"	"26143453.1713867"	"HCD"	"MS2"	"14.90746"	"270.3"	"37.937"	"35.4924"	"8927"	"8927"	"8907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.3"	"8.6"	"348.4"	""	"333.6"	""	"504.2"	"0.6"	"548.1"	"442.0"	""	"722"	"22"	"35.000"	"28.000"	"0.239611248415089"	"14"	"0.0003571"	"0.001511"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"452.58011"	"1355.72577"	"1355.72691"	"-0.84"	"-0.00038"	"7/72"	"7"	"72"	"122984009.462769"	"HCD"	"MS2"	"11.05972"	"330.2"	"30.126"	"35.1756"	"8797"	"8797"	"8779"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"340.2"	"43.5"	"318.7"	""	"360.3"	""	"656.5"	""	"734.7"	"691.2"	""	"722"	"43"	"35.000"	"28.000"	"0.00175997784927322"	"23"	"0.0001889"	"0.0004306"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"452.58029"	"1355.72632"	"1355.72691"	"-0.44"	"-0.00020"	"7/72"	"7"	"72"	"27638072.4135742"	"HCD"	"MS2"	"15.61278"	"198.1"	"29.272"	"35.5382"	"8989"	"8989"	"8970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"258.7"	"6.7"	"231.9"	""	"258.3"	""	"393.4"	"1.7"	"393.2"	"334.7"	""	"730"	"24"	"35.000"	"28.000"	"0.153212029156718"	"15"	"0.0002277"	"0.001249"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36682"	"1355.72637"	"1355.72691"	"-0.40"	"-0.00027"	"6/72"	"6"	"72"	"14271887.6870728"	"HCD"	"MS2"	"6.813143"	"467.7"	"100.000"	"35.2834"	"8885"	"8885"	"8858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"508.3"	""	"424.7"	""	"507.4"	""	"899.1"	""	"1103.6"	"1012.3"	""	"730"	"35"	"35.000"	"28.000"	"0.011357764630437"	"26"	"0.0001889"	"0.000488"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APWELLELR"	"[K].aPWELLELR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"678.39581"	"1355.78435"	"1355.78845"	"-3.03"	"-0.00205"	"8/70"	"8"	"70"	"2919572.19805908"	"HCD"	"MS2"	"15.18057"	"121.0"	"100.000"	"71.7590"	"23745"	"23745"	"23722"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.7"	""	"175.7"	""	"171.5"	""	"198.1"	"0.3"	"214.4"	"227.0"	""	"525"	"32"	"34.000"	"27.000"	"0.0170266538806413"	"27"	"0.0001889"	"0.0005042"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APWELLELR"	"[K].aPWELLELR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"678.39679"	"1355.78630"	"1355.78845"	"-1.59"	"-0.00108"	"8/70"	"8"	"70"	"3001405.58813477"	"HCD"	"MS2"	"12.39219"	"115.2"	"100.000"	"71.8527"	"23732"	"23732"	"23715"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.9"	""	"161.9"	""	"172.9"	""	"178.4"	"0.6"	"211.1"	"229.5"	""	"541"	"29"	"34.000"	"27.000"	"0.0375117451709846"	"27"	"0.0001889"	"0.0003933"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STSIQSFK"	"[K].sTSIQSFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"678.39984"	"1355.79241"	"1355.79349"	"-0.80"	"-0.00054"	"14/72"	"14"	"72"	"8059854.17510986"	"HCD"	"MS2"	"0"	"617.4"	"100.000"	"36.1640"	"9203"	"9203"	"9178"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"857.5"	""	"804.7"	""	"895.5"	""	"945.0"	""	"1118.5"	"1235.8"	""	"493"	"48"	"33.000"	"26.000"	"0.000362925031849665"	"26"	"0.0002277"	"0.00121"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STSIQSFK"	"[K].sTSIQSFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"678.40039"	"1355.79350"	"1355.79349"	"0.01"	"0.00001"	"14/72"	"14"	"72"	"8174667.40405273"	"HCD"	"MS2"	"0"	"661.7"	"100.000"	"36.2487"	"9281"	"9281"	"9257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"928.1"	""	"902.6"	""	"971.1"	""	"1014.0"	""	"1205.1"	"1257.4"	""	"495"	"48"	"33.000"	"26.000"	"0.000369466616370802"	"26"	"0.0001889"	"0.001068"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPDAIPGK"	"[K].lSPDAIPGk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"678.41907"	"1355.83086"	"1355.82987"	"0.73"	"0.00049"	"8/68"	"8"	"68"	"9634255.72821045"	"HCD"	"MS2"	"21.65019"	"551.6"	"100.000"	"41.1761"	"11300"	"11300"	"11277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"825.0"	""	"690.8"	""	"835.3"	""	"898.2"	""	"872.1"	"1100.1"	""	"364"	"37"	"32.000"	"25.000"	"0.00392709482465785"	"15"	"0.0001889"	"0.0005538"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPDAIPGK"	"[K].lSPDAIPGk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"678.41949"	"1355.83171"	"1355.82987"	"1.36"	"0.00092"	"7/68"	"7"	"68"	"9039286.18914795"	"HCD"	"MS2"	"5.42884"	"531.2"	"100.000"	"40.9811"	"11176"	"11176"	"11157"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"820.6"	""	"663.5"	""	"774.9"	""	"860.0"	""	"854.1"	"1056.0"	""	"364"	"41"	"32.000"	"25.000"	"0.00141602652289244"	"17"	"0.0001889"	"0.0006626"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYLDVLK"	"[K].fYLDVLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"678.42017"	"1355.83306"	"1355.83390"	"-0.62"	"-0.00042"	"6/48"	"6"	"48"	"3751162.63354492"	"HCD"	"MS2"	"15.75838"	"229.3"	"100.000"	"66.3608"	"21498"	"21498"	"21481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"355.2"	""	"306.4"	""	"345.1"	""	"370.5"	""	"403.8"	"389.0"	""	"348"	"24"	"32.000"	"25.000"	"0.063760137988723"	"25"	"0.0005564"	"0.003584"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAVGGLGSIIR"	"[K].aLAVGGLGSIIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"A1L108"	"Actin-related protein 2/3 complex subunit 5-like protein OS=Rattus norvegicus OX=10116 GN=Arpc5l PE=1 SV=2"	"A1L108"	"Actin-related protein 2/3 complex subunit 5-like protein OS=Rattus norvegicus OX=10116 GN=Arpc5l PE=1 SV=2"	"0"	"2"	"2"	"0.8714"	"0.0000"	"1"	"1"	"1"	"678.43201"	"1355.85674"	"1355.85720"	"-0.34"	"-0.00023"	"10/88"	"10"	"88"	"3789234.95098877"	"HCD"	"MS2"	"19.36074"	"164.4"	"100.000"	"57.7229"	"17974"	"17974"	"17947"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.9"	""	"236.6"	""	"233.7"	""	"275.6"	"1.3"	"275.7"	"299.7"	""	"244"	"70"	"30.000"	"23.000"	"1.19497778219861E-06"	""	"0"	"9.956E-06"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAVGGLGSIIR"	"[K].aLAVGGLGSIIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"A1L108"	"Actin-related protein 2/3 complex subunit 5-like protein OS=Rattus norvegicus OX=10116 GN=Arpc5l PE=1 SV=2"	"A1L108"	"Actin-related protein 2/3 complex subunit 5-like protein OS=Rattus norvegicus OX=10116 GN=Arpc5l PE=1 SV=2"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"678.43304"	"1355.85881"	"1355.85720"	"1.19"	"0.00081"	"10/88"	"10"	"88"	"4491231.07879639"	"HCD"	"MS2"	"37.32231"	"203.6"	"100.000"	"57.9287"	"18112"	"18112"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.0"	""	"311.7"	""	"297.7"	""	"317.7"	"0.1"	"352.2"	"369.3"	""	"227"	"61"	"30.000"	"23.000"	"9.90822503120506E-06"	""	"0"	"5.677E-06"	"1.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEQILGK"	"[R].iPEQILGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q01986"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2"	"Q01986"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"678.43640"	"1355.86553"	"1355.86626"	"-0.54"	"-0.00037"	"6/64"	"6"	"64"	"6249718.0279541"	"HCD"	"MS2"	"0"	"343.3"	"100.000"	"49.9781"	"14881"	"14881"	"14862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"516.0"	""	"444.1"	""	"505.5"	""	"549.4"	""	"626.6"	"610.5"	""	"207"	"39"	"30.000"	"23.000"	"0.00131201968116287"	"21"	"0.0004166"	"0.002114"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEQILGK"	"[R].iPEQILGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q01986"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2"	"Q01986"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"678.43665"	"1355.86601"	"1355.86626"	"-0.18"	"-0.00012"	"6/64"	"6"	"64"	"6150634.17126465"	"HCD"	"MS2"	"0"	"321.2"	"100.000"	"49.7079"	"14724"	"14724"	"14703"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"482.3"	""	"438.3"	""	"474.5"	""	"487.5"	"1.9"	"563.4"	"592.9"	""	"207"	"37"	"30.000"	"23.000"	"0.00229055302444184"	"19"	"0.0002277"	"0.001262"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEHIMDLTR"	"[K].lEHIMDLTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"452.92093"	"1356.74823"	"1356.75069"	"-1.81"	"-0.00082"	"8/76"	"8"	"76"	"2869401.81164551"	"HCD"	"MS2"	"51.83148"	"85.5"	"100.000"	"43.9559"	"12430"	"12430"	"12400"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.6"	""	"118.6"	""	"117.9"	""	"139.2"	""	"163.1"	"163.8"	""	"705"	"19"	"35.000"	"28.000"	"0.423798213202638"	"23"	"0.0004166"	"0.002294"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEHIMDLTR"	"[K].lEHIMDLTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"452.92111"	"1356.74878"	"1356.75069"	"-1.40"	"-0.00063"	"7/76"	"7"	"76"	"2648666.57440186"	"HCD"	"MS2"	"62.23768"	"90.7"	"100.000"	"43.7288"	"12288"	"12288"	"12266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.2"	""	"107.1"	""	"120.7"	""	"171.1"	"0.7"	"164.2"	"176.0"	""	"708"	"18"	"35.000"	"28.000"	"0.530888431767841"	"21"	"0.0001889"	"0.0007409"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTGMIIGPPR"	"[R].wTGMIIGPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"678.88568"	"1356.76409"	"1356.76594"	"-1.37"	"-0.00093"	"8/72"	"8"	"72"	"11606939.1939087"	"HCD"	"MS2"	"17.08894"	"591.4"	"100.000"	"56.0281"	"17335"	"17335"	"17317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"950.3"	""	"902.3"	""	"897.7"	""	"725.8"	"9.4"	"1049.9"	"1061.9"	""	"683"	"20"	"35.000"	"28.000"	"0.314333528753708"	"15"	"0.0001889"	"0.0004107"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTGMIIGPPR"	"[R].wTGMIIGPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"452.92630"	"1356.76435"	"1356.76594"	"-1.18"	"-0.00053"	"11/72"	"11"	"72"	"3004273.00109863"	"HCD"	"MS2"	"41.72834"	"96.5"	"100.000"	"56.2123"	"17411"	"17411"	"17381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"129.6"	""	"122.4"	""	"143.4"	""	"151.3"	""	"180.2"	"188.2"	""	"683"	"17"	"35.000"	"28.000"	"0.63007276564979"	"17"	"0.0001889"	"0.000713"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTGMIIGPPR"	"[R].wTGMIIGPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"678.88605"	"1356.76482"	"1356.76594"	"-0.83"	"-0.00056"	"9/72"	"9"	"72"	"12092166.6328735"	"HCD"	"MS2"	"16.75702"	"604.0"	"91.938"	"55.8567"	"17212"	"17212"	"17195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"946.2"	""	"948.7"	""	"918.9"	""	"713.9"	"7.7"	"1084.5"	"1097.8"	""	"685"	"23"	"35.000"	"28.000"	"0.170474951605285"	"15"	"0.0001889"	"0.000986"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTGMIIGPPR"	"[R].wTGMIIGPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"678.88623"	"1356.76518"	"1356.76594"	"-0.56"	"-0.00038"	"7/72"	"7"	"72"	"6022100.67041016"	"HCD"	"MS2"	"9.228401"	"306.2"	"92.220"	"56.3411"	"17463"	"17463"	"17445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"486.6"	""	"481.2"	""	"491.2"	""	"355.4"	"3.5"	"527.6"	"551.4"	""	"678"	"24"	"35.000"	"28.000"	"0.121394692177794"	"16"	"0.0001889"	"0.0005758"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTGMIIGPPR"	"[R].wTGMIIGPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"678.88684"	"1356.76641"	"1356.76594"	"0.34"	"0.00023"	"7/72"	"7"	"72"	"4079663.22589111"	"HCD"	"MS2"	"12.77181"	"251.0"	"100.000"	"56.1797"	"17343"	"17343"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"409.8"	""	"406.7"	""	"381.2"	""	"303.8"	"10.9"	"414.4"	"447.7"	""	"691"	"23"	"35.000"	"28.000"	"0.179245413449956"	"14"	"0.0001889"	"0.000381"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FSQFLEK"	"[K].fSQFLEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"678.89966"	"1356.79204"	"1356.79276"	"-0.53"	"-0.00036"	"6/64"	"6"	"64"	"10569388.5998535"	"HCD"	"MS2"	"29.55923"	"595.4"	"65.952"	"52.8600"	"16007"	"16007"	"15986"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"791.8"	""	"758.7"	""	"776.8"	""	"997.1"	"15.9"	"1135.0"	"1171.5"	""	"607"	"10"	"34.000"	"27.000"	"3.05603761496523"	"19"	"0.001217"	"0.01633"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDFGFAK"	"[K].lTDFGFAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H84"	"MAP kinase-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapkapk3 PE=2 SV=1"	"Q66H84"	"MAP kinase-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapkapk3 PE=2 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"678.89984"	"1356.79241"	"1356.79276"	"-0.26"	"-0.00018"	"7/58"	"7"	"58"	"4664685.36737061"	"HCD"	"MS2"	"4.619249"	"412.7"	"100.000"	"56.6177"	"17576"	"17576"	"17557"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"641.8"	""	"572.9"	""	"610.7"	""	"628.7"	""	"712.7"	"741.6"	""	"609"	"42"	"34.000"	"27.000"	"0.00171627666199003"	"18"	"0.0001889"	"0.0007854"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDAVVGYK"	"[K].fDAVVGYk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"678.90002"	"1356.79277"	"1356.79276"	"0.01"	"0.00001"	"7/56"	"7"	"56"	"5935330.56109619"	"HCD"	"MS2"	"31.65439"	"504.2"	"100.000"	"47.6714"	"13895"	"13895"	"13864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"661.4"	""	"693.9"	""	"725.8"	""	"819.8"	"6.6"	"950.4"	"920.8"	""	"609"	"43"	"34.000"	"27.000"	"0.00136957965815006"	"20"	"0.0001889"	"0.0005132"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDFGFAK"	"[K].lTDFGFAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H84"	"MAP kinase-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapkapk3 PE=2 SV=1"	"Q66H84"	"MAP kinase-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapkapk3 PE=2 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"678.90021"	"1356.79314"	"1356.79276"	"0.28"	"0.00019"	"7/58"	"7"	"58"	"4394086.13671875"	"HCD"	"MS2"	"5.080117"	"405.0"	"100.000"	"56.4124"	"17438"	"17438"	"17419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.8"	""	"575.4"	""	"614.0"	""	"628.7"	"0.8"	"722.3"	"716.7"	""	"624"	"42"	"34.000"	"27.000"	"0.00178712361667579"	"18"	"0.0001889"	"0.0007143"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDAVVGYK"	"[K].fDAVVGYk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"678.90186"	"1356.79643"	"1356.79276"	"2.71"	"0.00184"	"7/56"	"7"	"56"	"5505373.64123535"	"HCD"	"MS2"	"23.60744"	"488.4"	"100.000"	"47.9262"	"14047"	"14047"	"14018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"657.2"	""	"663.8"	""	"700.7"	""	"833.8"	"1.0"	"913.6"	"856.7"	""	"595"	"41"	"34.000"	"27.000"	"0.0024181707855882"	"19"	"0.0001889"	"0.0009909"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLETLFVHR"	"[R].lLETLFVHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"452.94440"	"1356.81864"	"1356.82009"	"-1.07"	"-0.00048"	"12/66"	"12"	"66"	"2810954.9107666"	"HCD"	"MS2"	"7.114892"	"44.6"	"100.000"	"57.6515"	"17945"	"17945"	"17915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.6"	""	"43.9"	""	"61.2"	""	"84.8"	""	"91.6"	"97.0"	""	"536"	"49"	"34.000"	"27.000"	"0.000342874189514217"	"23"	"7.476E-05"	"0.000187"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLETLFVHR"	"[R].lLETLFVHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"452.94489"	"1356.82010"	"1356.82009"	"0.01"	"0.00001"	"11/66"	"11"	"66"	"4015846.36096191"	"HCD"	"MS2"	"8.862769"	"56.8"	"100.000"	"57.9333"	"18114"	"18114"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.2"	""	"69.5"	""	"72.5"	""	"100.1"	""	"115.5"	"118.7"	""	"512"	"44"	"34.000"	"27.000"	"0.00110468883667908"	"21"	"0"	"0.0001618"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFWDFATR"	"[K].wFWDFATR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"679.34692"	"1357.68657"	"1357.68907"	"-1.84"	"-0.00125"	"6/62"	"6"	"62"	"2584339.11755371"	"HCD"	"MS2"	"0"	"150.4"	"100.000"	"76.6954"	"25700"	"25700"	"25695"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.1"	""	"262.6"	""	"161.6"	""	"313.5"	""	"261.0"	"244.7"	""	"543"	"29"	"34.000"	"27.000"	"0.036456068694893"	"23"	"0.0001889"	"0.001079"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFWDFATR"	"[K].wFWDFATR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"679.34705"	"1357.68682"	"1357.68907"	"-1.66"	"-0.00113"	"6/62"	"6"	"62"	"6753547.92150879"	"HCD"	"MS2"	"0.6796491"	"293.8"	"88.412"	"76.9392"	"25847"	"25847"	"25829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"383.2"	""	"501.1"	""	"314.0"	""	"592.1"	"0.1"	"509.0"	"483.0"	""	"542"	"30"	"34.000"	"27.000"	"0.028838275793879"	"26"	"0.000523"	"0.002833"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFWDFATR"	"[K].wFWDFATR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"679.34747"	"1357.68767"	"1357.68907"	"-1.03"	"-0.00070"	"7/62"	"7"	"62"	"2370860.88031006"	"HCD"	"MS2"	"0"	"127.1"	"100.000"	"76.6502"	"25732"	"25732"	"25722"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.9"	""	"206.7"	""	"154.7"	""	"246.2"	""	"232.7"	"210.2"	""	"542"	"13"	"34.000"	"27.000"	"1.23301764300663"	"19"	"0.0003839"	"0.001905"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFWDFATR"	"[K].wFWDFATR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"679.34772"	"1357.68816"	"1357.68907"	"-0.67"	"-0.00046"	"6/62"	"6"	"62"	"5698818.52008057"	"HCD"	"MS2"	"0"	"295.8"	"100.000"	"76.9913"	"25818"	"25818"	"25801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.8"	""	"508.9"	""	"327.5"	""	"593.1"	"2.3"	"509.0"	"481.3"	""	"540"	"28"	"34.000"	"27.000"	"0.0439909928812725"	"25"	"0.0003839"	"0.001806"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDAIMNFR"	"[K].vFDAImNFR.[K]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.36145"	"1357.71562"	"1357.71357"	"1.51"	"0.00103"	"7/68"	"7"	"68"	"4845747.75952148"	"HCD"	"MS2"	"55.85912"	"259.7"	"100.000"	"56.8575"	"17674"	"17674"	"17653"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"313.2"	""	"320.7"	""	"373.7"	""	"510.8"	""	"473.7"	"469.6"	""	"669"	"26"	"35.000"	"28.000"	"0.092767557500604"	"14"	"0.001058"	"0.01319"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDAIMNFR"	"[K].vFDAImNFR.[K]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.36310"	"1357.71892"	"1357.71357"	"3.94"	"0.00267"	"7/68"	"7"	"68"	"4584915.24981689"	"HCD"	"MS2"	"69.79751"	"242.5"	"100.000"	"56.6663"	"17542"	"17542"	"17515"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"283.6"	""	"309.1"	""	"333.0"	""	"504.7"	"5.1"	"420.8"	"440.8"	""	"711"	"26"	"35.000"	"28.000"	"0.0899165437736604"	"14"	"0.001422"	"0.01949"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDFVTALHR"	"[K].lGDFVTALHR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P18910"	"Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus OX=10116 GN=Npr1 PE=1 SV=1"	"P18910"	"Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus OX=10116 GN=Npr1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.25595"	"1357.75330"	"1357.77895"	"-18.89"	"-0.00855"	"12/78"	"12"	"78"	"3418544.99304199"	"HCD"	"MS2"	"22.24858"	"182.9"	"100.000"	"47.7774"	"13938"	"13938"	"13912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.9"	""	"237.3"	""	"268.5"	""	"308.3"	""	"349.4"	"341.3"	""	"765"	"10"	"35.000"	"28.000"	"3.44850960134279"	"13"	"0.00103"	"0.01206"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDLFEK"	"[K].fTDLFEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"679.39130"	"1357.77532"	"1357.77677"	"-1.07"	"-0.00073"	"12/56"	"12"	"56"	"4231095.45703125"	"HCD"	"MS2"	"15.59208"	"356.2"	"100.000"	"60.9453"	"19339"	"19339"	"19315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"552.8"	""	"479.8"	"3.3"	"517.1"	""	"577.1"	"3.6"	"609.9"	"627.6"	""	"700"	"29"	"35.000"	"28.000"	"0.0409324786856955"	"28"	"0.0006037"	"0.004131"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDLFEK"	"[K].fTDLFEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"679.39166"	"1357.77605"	"1357.77677"	"-0.53"	"-0.00036"	"12/56"	"12"	"56"	"3195470.43463135"	"HCD"	"MS2"	"8.393208"	"282.7"	"100.000"	"61.1155"	"19355"	"19355"	"19337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"399.8"	""	"370.2"	""	"422.1"	""	"463.6"	"2.4"	"504.1"	"514.9"	""	"705"	"31"	"35.000"	"28.000"	"0.029864766348456"	""	"0.0003839"	"0.001638"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDLFEK"	"[K].fTDLFEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"679.39172"	"1357.77617"	"1357.77677"	"-0.44"	"-0.00030"	"12/56"	"12"	"56"	"4047055.71166992"	"HCD"	"MS2"	"9.165358"	"327.0"	"100.000"	"61.2468"	"19462"	"19462"	"19443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"480.0"	""	"409.0"	""	"470.7"	""	"520.4"	""	"588.0"	"633.6"	""	"705"	"32"	"35.000"	"28.000"	"0.0208525476046854"	""	"0.0004166"	"0.002418"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDLFEK"	"[K].fTDLFEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"679.39240"	"1357.77751"	"1357.77677"	"0.54"	"0.00037"	"12/56"	"12"	"56"	"4628625.6940918"	"HCD"	"MS2"	"26.46504"	"384.9"	"100.000"	"60.8140"	"19232"	"19232"	"19209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"609.3"	""	"524.0"	""	"542.7"	""	"616.8"	""	"679.0"	"673.6"	""	"714"	"28"	"35.000"	"28.000"	"0.0551655834915214"	"28"	"0.0006037"	"0.004315"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADIGLAAWGR"	"[K].vADIGLAAWGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"453.26407"	"1357.77765"	"1357.77895"	"-0.96"	"-0.00043"	"8/80"	"8"	"80"	"3687716.27789307"	"HCD"	"MS2"	"3.878117"	"58.4"	"100.000"	"57.2621"	"17786"	"17786"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.4"	""	"84.8"	""	"76.7"	""	"96.4"	"0.5"	"102.0"	"111.9"	""	"714"	"64"	"35.000"	"28.000"	"1.36668433364106E-05"	"26"	"0"	"4.32E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADIGLAAWGR"	"[K].vADIGLAAWGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.8070"	"0.0000"	"1"	"1"	"1"	"453.26428"	"1357.77829"	"1357.77895"	"-0.48"	"-0.00022"	"13/80"	"13"	"80"	"3802319.40307617"	"HCD"	"MS2"	"0"	"59.3"	"100.000"	"57.4635"	"17922"	"17922"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.4"	""	"80.0"	""	"84.4"	""	"101.2"	"0.6"	"112.0"	"107.6"	""	"723"	"57"	"35.000"	"28.000"	"7.29639440470884E-05"	"27"	"0"	"8.385E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADIGLAAWGR"	"[K].vADIGLAAWGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"679.39362"	"1357.77995"	"1357.77895"	"0.74"	"0.00050"	"14/80"	"14"	"80"	"3739898.72741699"	"HCD"	"MS2"	"13.81102"	"208.3"	"100.000"	"57.4628"	"17868"	"17868"	"17851"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.2"	""	"305.3"	""	"304.0"	""	"314.6"	"8.9"	"362.5"	"366.0"	""	"708"	"50"	"35.000"	"28.000"	"0.000325089739155188"	"19"	"0"	"3.586E-05"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADIGLAAWGR"	"[K].vADIGLAAWGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"679.39380"	"1357.78032"	"1357.77895"	"1.01"	"0.00069"	"10/80"	"10"	"80"	"11408794.369873"	"HCD"	"MS2"	"42.71638"	"556.1"	"100.000"	"57.3647"	"17881"	"17881"	"17861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"751.3"	""	"682.5"	""	"693.0"	""	"947.4"	""	"1072.7"	"1131.2"	""	"717"	"41"	"35.000"	"28.000"	"0.00284766672148655"	"19"	"0"	"7.25E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADIGLAAWGR"	"[K].vADIGLAAWGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"679.39386"	"1357.78044"	"1357.77895"	"1.10"	"0.00075"	"13/80"	"13"	"80"	"3285275.80511475"	"HCD"	"MS2"	"20.65656"	"191.2"	"100.000"	"57.6782"	"18009"	"18009"	"17989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"280.4"	""	"280.3"	""	"272.9"	""	"291.4"	"6.6"	"338.0"	"340.3"	""	"715"	"44"	"35.000"	"28.000"	"0.00127138196388412"	"18"	"0"	"0.0001298"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADIGLAAWGR"	"[K].vADIGLAAWGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"679.39386"	"1357.78044"	"1357.77895"	"1.10"	"0.00075"	"10/80"	"10"	"80"	"10524134.5183716"	"HCD"	"MS2"	"46.33047"	"507.3"	"100.000"	"57.1587"	"17743"	"17743"	"17723"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"648.2"	""	"600.9"	""	"628.2"	""	"874.8"	""	"1016.9"	"1047.2"	""	"715"	"39"	"35.000"	"28.000"	"0.00482254230526516"	"18"	"0"	"6.655E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFLVAETPR"	"[R].vPFLVAETPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P54645"	"5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Prkaa1 PE=1 SV=2"	"P54645"	"5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Prkaa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"679.40448"	"1357.80168"	"1357.80410"	"-1.78"	"-0.00121"	"5/74"	"5"	"74"	"2118955.64672852"	"HCD"	"MS2"	"0"	"122.0"	"100.000"	"53.1889"	"16137"	"16137"	"16128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.0"	""	"137.9"	""	"154.5"	""	"227.1"	"1.7"	"254.2"	"249.4"	""	"720"	"23"	"35.000"	"28.000"	"0.195120320544584"	"22"	"0.0003839"	"0.001731"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPFLVAETPR"	"[R].vPFLVAETPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P54645"	"5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Prkaa1 PE=1 SV=2"	"P54645"	"5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Prkaa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"679.40472"	"1357.80217"	"1357.80410"	"-1.42"	"-0.00097"	"6/74"	"6"	"74"	"2452165.44787598"	"HCD"	"MS2"	"0"	"121.7"	"100.000"	"53.4524"	"16294"	"16294"	"16281"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.3"	""	"131.0"	""	"146.9"	""	"228.3"	""	"238.1"	"259.1"	""	"673"	"36"	"35.000"	"28.000"	"0.00909881989522626"	"20"	"0.0001308"	"0.0002488"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESFYIK"	"[R].lESFYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"679.40997"	"1357.81267"	"1357.81316"	"-0.36"	"-0.00025"	"5/50"	"5"	"50"	"1781199.09484863"	"HCD"	"MS2"	"40.40014"	"161.8"	"100.000"	"54.8444"	"16851"	"16851"	"16821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.0"	""	"200.2"	""	"221.7"	""	"242.0"	"1.3"	"350.6"	"297.8"	""	"694"	"25"	"35.000"	"28.000"	"0.104070939408872"	"28"	"0.0004166"	"0.002246"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESFYIK"	"[R].lESFYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"679.41003"	"1357.81279"	"1357.81316"	"-0.27"	"-0.00018"	"5/50"	"5"	"50"	"1716603.94891357"	"HCD"	"MS2"	"46.45567"	"158.7"	"100.000"	"54.6473"	"16717"	"16717"	"16688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.0"	""	"197.8"	""	"217.2"	""	"240.9"	"0.6"	"320.9"	"290.3"	""	"694"	"27"	"35.000"	"28.000"	"0.0619911188473662"	""	"0.0003839"	"0.001795"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYDLLFK"	"[K].tYDLLFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"679.41101"	"1357.81474"	"1357.81316"	"1.17"	"0.00079"	"12/52"	"12"	"52"	"4645146.29107666"	"HCD"	"MS2"	"18.01188"	"399.2"	"100.000"	"58.2418"	"18240"	"18240"	"18213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"508.3"	""	"498.5"	""	"554.9"	""	"681.4"	""	"753.1"	"791.1"	""	"683"	"30"	"35.000"	"28.000"	"0.0319441037721389"	"19"	"0.0004166"	"0.002367"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYDLLFK"	"[K].tYDLLFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"679.41113"	"1357.81499"	"1357.81316"	"1.35"	"0.00091"	"12/52"	"12"	"52"	"4317468.4901123"	"HCD"	"MS2"	"16.62278"	"365.6"	"100.000"	"58.0637"	"18113"	"18113"	"18091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"440.4"	""	"457.8"	""	"503.4"	""	"641.0"	""	"692.8"	"734.2"	""	"682"	"33"	"35.000"	"28.000"	"0.0171298823027134"	"20"	"0.0006037"	"0.004021"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVYLYTK"	"[R].iVYLYTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"679.42841"	"1357.84953"	"1357.84955"	"-0.01"	"-0.00001"	"5/48"	"5"	"48"	"7893849.11968994"	"HCD"	"MS2"	"4.858044"	"561.4"	"100.000"	"51.3364"	"15384"	"15384"	"15362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"896.4"	""	"992.1"	""	"1000.3"	""	"839.3"	"0.4"	"822.9"	"745.4"	""	"467"	"35"	"33.000"	"26.000"	"0.00798521998269511"	"21"	"0.0006037"	"0.004314"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVYLYTK"	"[R].iVYLYTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"679.42853"	"1357.84978"	"1357.84955"	"0.17"	"0.00012"	"5/48"	"5"	"48"	"7646826.75854492"	"HCD"	"MS2"	"7.394964"	"549.1"	"100.000"	"51.4929"	"15498"	"15498"	"15478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"915.4"	""	"925.4"	""	"973.8"	""	"831.3"	"1.5"	"804.4"	"728.3"	""	"463"	"38"	"33.000"	"26.000"	"0.00411671683424011"	"23"	"0.0006396"	"0.006254"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLNAIVQK"	"[R].nLNAIVQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.5250"	"0.0000"	"1"	"1"	"1"	"679.43109"	"1357.85491"	"1357.85676"	"-1.36"	"-0.00092"	"7/72"	"7"	"72"	"15236946.7471924"	"HCD"	"MS2"	"18.76334"	"532.6"	"53.068"	"39.7211"	"10706"	"10706"	"10686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1018.7"	""	"583.9"	""	"611.4"	""	"854.1"	""	"977.2"	"999.0"	""	"416"	"40"	"33.000"	"26.000"	"0.00190135554225812"	""	"0.0003839"	"0.00202"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLNAIVQK"	"[R].nLNAIVQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"679.43121"	"1357.85515"	"1357.85676"	"-1.18"	"-0.00080"	"7/72"	"7"	"72"	"16503470.9453125"	"HCD"	"MS2"	"16.02554"	"615.9"	"54.465"	"39.6067"	"10616"	"10616"	"10598"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1170.0"	""	"696.3"	""	"701.5"	""	"1008.4"	""	"1136.7"	"1122.7"	""	"416"	"42"	"33.000"	"26.000"	"0.00135538705964655"	""	"0.0002277"	"0.00117"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAPALVSK"	"[K].tIAPALVSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.29785"	"1357.87900"	"1357.88191"	"-2.14"	"-0.00097"	"9/78"	"9"	"78"	"8048484.52575684"	"HCD"	"MS2"	"28.42367"	"316.0"	"100.000"	"41.5840"	"11467"	"11467"	"11447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"500.9"	""	"453.7"	""	"467.5"	""	"488.3"	""	"537.6"	"544.5"	""	"299"	"24"	"31.000"	"24.000"	"0.0531668821260633"	"14"	"0.0001889"	"0.000433"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAPALVSK"	"[K].tIAPALVSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9818"	"0.0000"	"1"	"1"	"1"	"679.44330"	"1357.87932"	"1357.88191"	"-1.91"	"-0.00129"	"8/78"	"8"	"78"	"3934116.75231934"	"HCD"	"MS2"	"13.27851"	"277.8"	"100.000"	"42.0954"	"11676"	"11676"	"11663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.6"	""	"362.3"	""	"379.6"	""	"467.4"	""	"497.7"	"511.3"	""	"299"	"55"	"31.000"	"24.000"	"4.44264071744835E-05"	"17"	"0.0001308"	"0.000234"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAPALVSK"	"[K].tIAPALVSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"679.44330"	"1357.87932"	"1357.88191"	"-1.91"	"-0.00129"	"8/78"	"8"	"78"	"5139373.95489502"	"HCD"	"MS2"	"0"	"337.6"	"100.000"	"41.5152"	"11439"	"11439"	"11421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"595.1"	""	"476.6"	""	"482.4"	""	"560.3"	"3.4"	"538.0"	"534.7"	""	"299"	"56"	"31.000"	"24.000"	"4.10810175888808E-05"	"17"	"0.0001308"	"0.0002375"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAPALVSK"	"[K].tIAPALVSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.29828"	"1357.88028"	"1357.88191"	"-1.20"	"-0.00054"	"6/78"	"6"	"78"	"10585502.241394"	"HCD"	"MS2"	"29.67159"	"403.0"	"100.000"	"41.4097"	"11352"	"11352"	"11328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"621.3"	""	"564.2"	""	"581.9"	""	"661.2"	""	"694.0"	"691.9"	""	"299"	"35"	"31.000"	"24.000"	"0.00476037529498056"	"15"	"7.476E-05"	"0.0001879"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAPALVSK"	"[K].tIAPALVSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"679.44385"	"1357.88042"	"1357.88191"	"-1.10"	"-0.00074"	"8/78"	"8"	"78"	"4494298.49407959"	"HCD"	"MS2"	"0"	"297.8"	"100.000"	"41.3089"	"11311"	"11311"	"11285"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"492.6"	""	"434.7"	""	"388.9"	""	"497.3"	"1.2"	"499.1"	"503.4"	""	"299"	"56"	"31.000"	"24.000"	"4.1461135564545E-05"	"17"	"0.0001308"	"0.0002059"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAPALVSK"	"[K].tIAPALVSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.44409"	"1357.88091"	"1357.88191"	"-0.74"	"-0.00050"	"8/78"	"8"	"78"	"2630746.78521729"	"HCD"	"MS2"	"0"	"197.1"	"100.000"	"41.9507"	"11572"	"11572"	"11557"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"287.4"	""	"276.0"	""	"277.7"	""	"311.0"	"2.5"	"345.6"	"366.3"	""	"299"	"62"	"31.000"	"24.000"	"9.41111743371511E-06"	"16"	"0"	"8.493E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAPALVSK"	"[K].tIAPALVSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.29865"	"1357.88138"	"1357.88191"	"-0.39"	"-0.00018"	"8/78"	"8"	"78"	"21727846.9605713"	"HCD"	"MS2"	"9.155791"	"295.8"	"33.106"	"41.7014"	"11471"	"11471"	"11451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"398.8"	""	"384.2"	""	"386.7"	""	"487.3"	""	"567.7"	"584.1"	""	"299"	"29"	"31.000"	"24.000"	"0.0200743361690111"	"14"	"0.0001889"	"0.0009719"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAPALVSK"	"[K].tIAPALVSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.44434"	"1357.88140"	"1357.88191"	"-0.38"	"-0.00026"	"8/78"	"8"	"78"	"76301920.2998047"	"HCD"	"MS2"	"0"	"674.1"	"16.510"	"41.7973"	"11555"	"11555"	"11538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1051.5"	""	"928.0"	""	"958.5"	""	"1063.2"	"0.8"	"1157.0"	"1220.8"	""	"299"	"58"	"31.000"	"24.000"	"2.40237717325425E-05"	"16"	"0.0001889"	"0.0006793"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAPALVSK"	"[K].tIAPALVSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.44452"	"1357.88176"	"1357.88191"	"-0.11"	"-0.00007"	"8/78"	"8"	"78"	"66537122.1196289"	"HCD"	"MS2"	"0"	"819.9"	"21.992"	"41.6139"	"11436"	"11436"	"11419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1255.6"	""	"1094.9"	""	"1162.7"	""	"1280.3"	"2.5"	"1449.1"	"1518.6"	""	"299"	"56"	"31.000"	"24.000"	"3.79001730259437E-05"	"16"	"0.0001889"	"0.0005408"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAPALVSK"	"[K].tIAPALVSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.29898"	"1357.88239"	"1357.88191"	"0.35"	"0.00016"	"9/78"	"9"	"78"	"26821672.65271"	"HCD"	"MS2"	"5.599143"	"613.8"	"62.043"	"41.8799"	"11588"	"11588"	"11570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"897.4"	""	"813.4"	""	"891.3"	""	"959.9"	""	"1111.0"	"1149.3"	""	"295"	"29"	"31.000"	"24.000"	"0.0176519228367818"	"14"	"0.0001889"	"0.0004333"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGALPPAFSTR"	"[R].lGALPPAFSTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"679.90198"	"1358.79668"	"1358.79935"	"-1.97"	"-0.00134"	"8/82"	"8"	"82"	"2484271.32537842"	"HCD"	"MS2"	"100"	"154.1"	"100.000"	"50.1957"	"14970"	"14970"	"14942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.5"	""	"200.7"	""	"201.8"	""	"263.8"	""	"303.8"	"315.6"	""	"897"	"17"	"36.000"	"29.000"	"0.848716112962271"	"20"	"0.001217"	"0.01681"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGALPPAFSTR"	"[R].lGALPPAFSTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"679.90283"	"1358.79839"	"1358.79935"	"-0.71"	"-0.00048"	"8/82"	"8"	"82"	"2794500.63977051"	"HCD"	"MS2"	"36.653"	"169.6"	"100.000"	"49.8873"	"14797"	"14797"	"14778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.6"	""	"216.7"	""	"218.1"	""	"284.0"	""	"328.0"	"331.7"	""	"881"	"14"	"36.000"	"29.000"	"1.84903832448039"	"20"	"0.0003839"	"0.001572"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGALPPAFSTR"	"[R].lGALPPAFSTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"679.90295"	"1358.79863"	"1358.79935"	"-0.53"	"-0.00036"	"4/82"	"4"	"82"	"2047156.3190918"	"HCD"	"MS2"	"0"	"142.5"	"100.000"	"50.4833"	"15035"	"15035"	"15015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.1"	""	"210.8"	""	"214.0"	""	"217.4"	"0.1"	"243.8"	"266.1"	""	"881"	"8"	"36.000"	"29.000"	"7.56738644542918"	"14"	"0.0008453"	"0.008386"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGALPPAFSTR"	"[R].lGALPPAFSTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"679.90302"	"1358.79875"	"1358.79935"	"-0.44"	"-0.00030"	"9/82"	"9"	"82"	"2367573.98529053"	"HCD"	"MS2"	"0"	"138.4"	"100.000"	"50.5761"	"15123"	"15123"	"15105"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.4"	""	"163.3"	""	"187.7"	""	"217.6"	"1.4"	"270.1"	"288.8"	""	"881"	"24"	"36.000"	"29.000"	"0.188775623235072"	"22"	"0.0001308"	"0.0003015"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGALPPAFSTR"	"[R].lGALPPAFSTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"679.90308"	"1358.79888"	"1358.79935"	"-0.35"	"-0.00024"	"8/82"	"8"	"82"	"2499410.61181641"	"HCD"	"MS2"	"0"	"158.5"	"100.000"	"50.1695"	"14908"	"14908"	"14899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.7"	""	"184.5"	""	"195.1"	""	"253.6"	"0.8"	"333.9"	"351.2"	""	"881"	"23"	"36.000"	"29.000"	"0.197672344265545"	"23"	"0.0001859"	"0.000333"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALLNLVGTDL"	"[K].tALLNLVGTDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"679.90710"	"1358.80693"	"1358.80925"	"-1.70"	"-0.00116"	"7/98"	"7"	"98"	"882668.740661621"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"85.4642"	"29324"	"29324"	"29298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.2"	""	"16.4"	""	"16.5"	""	"23.5"	""	"23.4"	"25.4"	""	"821"	"63"	"36.000"	"29.000"	"2.25586528718555E-05"	""	"0.0001889"	"0.0004061"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALLNLVGTDL"	"[K].tALLNLVGTDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"679.90747"	"1358.80766"	"1358.80925"	"-1.16"	"-0.00079"	"7/98"	"7"	"98"	"963382.818969727"	"HCD"	"MS2"	"13.81119"	"16.5"	"100.000"	"86.0552"	"29560"	"29560"	"29543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.7"	""	"22.3"	""	"26.5"	""	"21.5"	""	"29.9"	"35.9"	""	"822"	"41"	"36.000"	"29.000"	"0.00294334941597502"	"28"	"0.0001889"	"0.0006122"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALLNLVGTDL"	"[K].tALLNLVGTDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"679.90814"	"1358.80901"	"1358.80925"	"-0.18"	"-0.00012"	"7/98"	"7"	"98"	"1102575.60205078"	"HCD"	"MS2"	"10.83047"	"18.7"	"100.000"	"85.9873"	"29481"	"29481"	"29464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.1"	""	"27.3"	""	"26.3"	""	"28.7"	""	"37.4"	"37.0"	""	"829"	"58"	"36.000"	"29.000"	"6.23052344944315E-05"	"27"	"0.0001889"	"0.0004679"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALLNLVGTDL"	"[K].tALLNLVGTDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"679.90839"	"1358.80950"	"1358.80925"	"0.18"	"0.00012"	"5/98"	"5"	"98"	"168667.349914551"	"HCD"	"MS2"	"37.63968"	"8.0"	"100.000"	"86.3194"	"29614"	"29614"	"29585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.8"	""	"8.7"	""	"11.3"	""	"12.5"	""	"16.6"	"15.3"	""	"829"	"16"	"36.000"	"29.000"	"0.945201788844173"	"28"	"0.001846"	"0.0263"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALLNLVGTDL"	"[K].tALLNLVGTDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"679.90851"	"1358.80974"	"1358.80925"	"0.36"	"0.00025"	"6/98"	"6"	"98"	"687425.49621582"	"HCD"	"MS2"	"16.88069"	"13.0"	"100.000"	"85.4070"	"29250"	"29250"	"29227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.0"	""	"15.8"	""	"23.0"	""	"21.3"	""	"24.2"	"28.0"	""	"824"	"50"	"36.000"	"29.000"	"0.000380975647662547"	"27"	"0.0001889"	"0.0005068"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALLNLVGTDL"	"[K].tALLNLVGTDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8553"	"0.0000"	"1"	"1"	"1"	"679.90851"	"1358.80974"	"1358.80925"	"0.36"	"0.00025"	"8/98"	"8"	"98"	"15750367.8380127"	"HCD"	"MS2"	"0.8262573"	"46.8"	"42.281"	"85.7530"	"29438"	"29438"	"29421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.0"	""	"57.8"	""	"74.0"	""	"80.5"	""	"68.7"	"103.7"	""	"824"	"76"	"36.000"	"29.000"	"1.11403084601284E-06"	"29"	"0.0001889"	"0.000575"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALLNLVGTDL"	"[K].tALLNLVGTDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"679.90863"	"1358.80998"	"1358.80925"	"0.54"	"0.00037"	"4/98"	"4"	"98"	"169107.898681641"	"HCD"	"MS2"	"30.96194"	"8.2"	"100.000"	"86.3759"	"29689"	"29689"	"29668"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"11.0"	""	"13.1"	""	"14.7"	""	"15.8"	"14.5"	""	"824"	"18"	"36.000"	"29.000"	"0.635180586615219"	"24"	"0.0008125"	"0.007636"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALLNLVGTDL"	"[K].tALLNLVGTDL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"679.90863"	"1358.80998"	"1358.80925"	"0.54"	"0.00037"	"8/98"	"8"	"98"	"15583852.0323486"	"HCD"	"MS2"	"0.5823392"	"51.1"	"45.200"	"85.7002"	"29369"	"29369"	"29352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.7"	""	"67.7"	""	"79.8"	""	"79.4"	""	"91.1"	"112.8"	""	"824"	"76"	"36.000"	"29.000"	"1.04447299576514E-06"	"27"	"0.0001889"	"0.0005783"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVFIHK"	"[K].aGEVFIHk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"453.61139"	"1358.81961"	"1358.81964"	"-0.02"	"-0.00001"	"4/56"	"4"	"56"	"6567950.66760254"	"HCD"	"MS2"	"34.59093"	"314.7"	"95.841"	"34.8157"	"8693"	"8693"	"8666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"374.0"	""	"423.7"	""	"410.5"	""	"548.7"	""	"634.6"	"596.5"	""	"769"	"17"	"35.000"	"28.000"	"0.777850874201795"	"19"	"0.0006037"	"0.005245"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPPALEK"	"[R].fVPPALEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"679.92529"	"1358.84331"	"1358.84479"	"-1.09"	"-0.00074"	"7/56"	"7"	"56"	"16117815.6060791"	"HCD"	"MS2"	"2.697456"	"347.9"	"39.607"	"49.8728"	"14838"	"14838"	"14814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"518.2"	"3.7"	"476.6"	""	"486.9"	""	"521.6"	"0.1"	"641.7"	"646.9"	""	"593"	"29"	"34.000"	"27.000"	"0.0401813660762082"	"25"	"0.00348"	"0.07785"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPPALEK"	"[R].fVPPALEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"679.92590"	"1358.84453"	"1358.84479"	"-0.19"	"-0.00013"	"7/56"	"7"	"56"	"16786225.8778076"	"HCD"	"MS2"	"3.390912"	"599.6"	"66.584"	"49.5893"	"14675"	"14675"	"14655"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"893.5"	""	"851.9"	""	"869.6"	""	"874.2"	""	"1096.8"	"1098.6"	""	"596"	"25"	"34.000"	"27.000"	"0.0875419596284536"	"20"	"0.003507"	"0.07918"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"680.35895"	"1359.71062"	"1359.71060"	"0.02"	"0.00001"	"8/84"	"8"	"84"	"4095329.69580078"	"HCD"	"MS2"	"0"	"225.2"	"100.000"	"36.9933"	"9587"	"9587"	"9558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.8"	""	"234.7"	""	"253.4"	""	"462.1"	"1.1"	"467.2"	"518.3"	""	"697"	"41"	"35.000"	"28.000"	"0.00287874225427647"	"22"	"0"	"7.908E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"680.35913"	"1359.71099"	"1359.71060"	"0.29"	"0.00019"	"8/84"	"8"	"84"	"3838091.18548584"	"HCD"	"MS2"	"20.79711"	"219.1"	"100.000"	"36.9114"	"9510"	"9510"	"9482"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.4"	""	"235.6"	""	"226.4"	""	"455.9"	"0.2"	"455.9"	"519.1"	""	"711"	"48"	"35.000"	"28.000"	"0.000563429529919926"	"21"	"0"	"9.809E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"680.38214"	"1359.75701"	"1359.75822"	"-0.89"	"-0.00060"	"6/84"	"6"	"84"	"5574640.98468018"	"HCD"	"MS2"	"0"	"245.4"	"100.000"	"44.4815"	"12594"	"12594"	"12578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"337.5"	""	"324.9"	""	"368.8"	""	"414.1"	"1.4"	"455.1"	"422.7"	""	"964"	"44"	"36.000"	"29.000"	"0.00193663170829189"	"23"	"0"	"0.0001586"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"680.38220"	"1359.75713"	"1359.75822"	"-0.80"	"-0.00054"	"5/84"	"5"	"84"	"5943086.91802979"	"HCD"	"MS2"	"23.73577"	"431.3"	"100.000"	"45.3730"	"13007"	"13007"	"12987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"648.2"	""	"700.0"	""	"625.5"	""	"580.8"	""	"805.2"	"729.5"	""	"961"	"12"	"36.000"	"29.000"	"2.81639388048991"	"16"	"0.0001889"	"0.0004925"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"680.38226"	"1359.75725"	"1359.75822"	"-0.71"	"-0.00048"	"6/84"	"6"	"84"	"6272313.71484375"	"HCD"	"MS2"	"0"	"272.7"	"100.000"	"44.7451"	"12751"	"12751"	"12734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"373.4"	""	"383.9"	""	"407.0"	""	"454.7"	""	"494.2"	"473.7"	""	"949"	"41"	"36.000"	"29.000"	"0.00378648479108655"	"23"	"0"	"0.0001352"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"680.38251"	"1359.75774"	"1359.75822"	"-0.35"	"-0.00024"	"6/84"	"6"	"84"	"12427332.4755859"	"HCD"	"MS2"	"3.997132"	"288.5"	"54.525"	"45.0505"	"12876"	"12876"	"12859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"384.0"	""	"392.0"	""	"372.0"	""	"499.5"	""	"550.8"	"538.6"	""	"949"	"39"	"36.000"	"29.000"	"0.00644519730405604"	"22"	"0.0001859"	"0.0003267"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"680.38257"	"1359.75786"	"1359.75822"	"-0.26"	"-0.00018"	"6/84"	"6"	"84"	"11677779.5701294"	"HCD"	"MS2"	"6.886399"	"330.0"	"65.964"	"44.7976"	"12723"	"12723"	"12704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"440.1"	""	"441.1"	""	"417.7"	""	"543.9"	""	"655.6"	"633.7"	""	"949"	"41"	"36.000"	"29.000"	"0.00364113026702183"	"22"	"0.0001308"	"0.0002787"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"680.38275"	"1359.75823"	"1359.75822"	"0.01"	"0.00001"	"5/84"	"5"	"84"	"4949954.20159912"	"HCD"	"MS2"	"20.33139"	"309.9"	"100.000"	"45.1107"	"12851"	"12851"	"12832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"448.1"	""	"496.7"	""	"448.2"	""	"433.8"	""	"625.4"	"484.1"	""	"948"	"24"	"36.000"	"29.000"	"0.190448844342397"	"23"	"0.0001859"	"0.0003245"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPAFEK"	"[R].yFPAFEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"Q6AXY0; P04904"	"Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"680.38885"	"1359.77043"	"1359.77130"	"-0.63"	"-0.00043"	"5/48"	"5"	"48"	"11452191.7175293"	"HCD"	"MS2"	"24.86306"	"871.6"	"100.000"	"52.3632"	"15854"	"15854"	"15830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1300.8"	""	"1183.4"	""	"1244.3"	""	"1612.0"	""	"1349.2"	"1556.8"	""	"899"	"30"	"36.000"	"29.000"	"0.0473946909927871"	"16"	"0.0007076"	"0.006736"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPAFEK"	"[R].yFPAFEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"Q6AXY0; P04904"	"Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.38885"	"1359.77043"	"1359.77130"	"-0.63"	"-0.00043"	"5/48"	"5"	"48"	"17501135.8847656"	"HCD"	"MS2"	"4.81804"	"1286.8"	"100.000"	"52.1836"	"15731"	"15731"	"15714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1823.1"	""	"1689.0"	""	"1846.2"	""	"2382.3"	""	"2003.0"	"2439.0"	""	"899"	"28"	"36.000"	"29.000"	"0.076512024952353"	"14"	"0.0006737"	"0.00651"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPAFEK"	"[R].yFPAFEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"Q6AXY0; P04904"	"Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"680.38898"	"1359.77068"	"1359.77130"	"-0.45"	"-0.00031"	"5/48"	"5"	"48"	"53450846.3034668"	"HCD"	"MS2"	"0.5571361"	"625.7"	"16.335"	"52.6578"	"15975"	"15975"	"15958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"867.7"	""	"757.9"	""	"923.5"	""	"1090.2"	""	"1007.6"	"1285.2"	""	"899"	"28"	"36.000"	"29.000"	"0.0754622406146091"	"16"	"0.001686"	"0.02291"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPAFEK"	"[R].yFPAFEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"Q6AXY0; P04904"	"Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"453.92856"	"1359.77112"	"1359.77130"	"-0.13"	"-0.00006"	"8/48"	"8"	"48"	"6663973.8739624"	"HCD"	"MS2"	"24.0978"	"274.8"	"100.000"	"52.3329"	"15792"	"15792"	"15762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"392.8"	""	"357.9"	""	"397.0"	""	"498.3"	""	"442.8"	"513.7"	""	"916"	"21"	"36.000"	"29.000"	"0.331791669714346"	"15"	"0.0006037"	"0.005989"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPAFEK"	"[R].yFPAFEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"Q6AXY0; P04904"	"Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.38934"	"1359.77141"	"1359.77130"	"0.08"	"0.00006"	"5/48"	"5"	"48"	"29451307.4233398"	"HCD"	"MS2"	"0.4905329"	"689.4"	"30.836"	"52.4964"	"15859"	"15859"	"15842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"932.0"	""	"816.6"	""	"971.4"	""	"1246.3"	""	"1108.9"	"1459.3"	""	"916"	"30"	"36.000"	"29.000"	"0.0489627134683977"	"14"	"0.00119"	"0.01602"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPAFEK"	"[R].yFPAFEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"Q6AXY0; P04904"	"Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.92966"	"1359.77442"	"1359.77130"	"2.30"	"0.00104"	"7/48"	"7"	"48"	"7716040.02349854"	"HCD"	"MS2"	"39.25403"	"321.6"	"100.000"	"52.4966"	"15909"	"15909"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"438.9"	""	"419.6"	""	"456.3"	""	"557.9"	""	"528.9"	"650.6"	""	"902"	"14"	"36.000"	"29.000"	"1.74251506651385"	"13"	"0.00119"	"0.01558"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLFHSGGK"	"[R].gVLFHSGGk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"680.41083"	"1359.81438"	"1359.81489"	"-0.38"	"-0.00026"	"8/64"	"8"	"64"	"996676.248474121"	"HCD"	"MS2"	"0"	"81.3"	"100.000"	"31.4793"	"7337"	"7337"	"7311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.8"	""	"122.5"	""	"131.2"	""	"134.1"	""	"131.0"	"132.8"	""	"745"	"39"	"35.000"	"28.000"	"0.00499029566066161"	"22"	"0"	"0.0001211"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLFHSGGK"	"[R].gVLFHSGGk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"680.41144"	"1359.81560"	"1359.81489"	"0.52"	"0.00035"	"8/64"	"8"	"64"	"981276.127807617"	"HCD"	"MS2"	"0"	"85.2"	"100.000"	"31.3649"	"7248"	"7248"	"7222"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.9"	""	"123.4"	""	"117.9"	""	"135.4"	"0.7"	"146.1"	"160.0"	""	"723"	"36"	"35.000"	"28.000"	"0.00865183645940548"	"24"	"0"	"9.553E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SLKPDSVR"	"[K].sLkPDSVR.[S]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"453.94983"	"1359.83493"	"1359.83602"	"-0.80"	"-0.00036"	"6/76"	"6"	"76"	"4105739.72387695"	"HCD"	"MS2"	"31.4856"	"398.8"	"100.000"	"27.7128"	"5833"	"5833"	"5809"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"590.5"	""	"538.6"	""	"613.9"	""	"554.6"	""	"741.5"	"741.9"	""	"668"	"3"	"35.000"	"28.000"	"17.731540437315"	"13"	"0.001686"	"0.02319"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKPIWTR"	"[K].tkPIWTR.[N]"	"N-Term(TMT6plex); K2(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.42889"	"1359.85051"	"1359.85128"	"-0.56"	"-0.00038"	"6/68"	"6"	"68"	"8629737.01275635"	"HCD"	"MS2"	"10.96005"	"448.7"	"100.000"	"31.4887"	"7299"	"7299"	"7270"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"700.8"	""	"597.0"	""	"672.3"	""	"695.8"	""	"781.9"	"803.1"	""	"619"	"11"	"34.000"	"27.000"	"2.5215097590445"	"13"	"0.004346"	"0.1162"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKPIWTR"	"[K].tkPIWTR.[N]"	"N-Term(TMT6plex); K2(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"453.95523"	"1359.85114"	"1359.85128"	"-0.10"	"-0.00005"	"8/68"	"8"	"68"	"164337534.695068"	"HCD"	"MS2"	"24.47679"	"1847.4"	"19.813"	"31.5735"	"7375"	"7375"	"7357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2983.0"	""	"2481.2"	""	"2756.0"	""	"2879.1"	""	"3146.1"	"3271.4"	""	"619"	"2"	"34.000"	"27.000"	"17.6059982096169"	"13"	"0.004346"	"0.124"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEQGK"	"[R].lITLEQGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"3"	"3"	"0.5769"	"0.0000"	"1"	"1"	"1"	"453.95795"	"1359.85929"	"1359.86117"	"-1.39"	"-0.00063"	"5/64"	"5"	"64"	"5230848.15228271"	"HCD"	"MS2"	"51.80525"	"207.5"	"100.000"	"43.5385"	"12211"	"12211"	"12186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"292.9"	""	"294.6"	""	"273.8"	""	"333.1"	""	"362.3"	"411.8"	""	"564"	"26"	"34.000"	"27.000"	"0.0740029629234413"	"25"	"0.0004166"	"0.002212"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVTNLDK"	"[R].lVVTNLDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"680.43365"	"1359.86003"	"1359.86117"	"-0.84"	"-0.00057"	"7/68"	"7"	"68"	"2969544.06628418"	"HCD"	"MS2"	"41.50645"	"211.5"	"100.000"	"43.9695"	"12386"	"12386"	"12358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"300.9"	""	"283.6"	""	"296.1"	""	"310.5"	"4.6"	"394.4"	"414.4"	""	"564"	"40"	"34.000"	"27.000"	"0.00291238716424714"	"22"	"0.0001889"	"0.0007402"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEQGK"	"[R].lITLEQGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5581"	"0.0000"	"1"	"1"	"1"	"680.43365"	"1359.86003"	"1359.86117"	"-0.84"	"-0.00057"	"7/64"	"7"	"64"	"8572858.06567383"	"HCD"	"MS2"	"0"	"608.0"	"100.000"	"43.7681"	"12353"	"12353"	"12332"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"944.6"	""	"924.6"	""	"914.2"	""	"907.7"	""	"977.7"	"1084.4"	""	"564"	"43"	"34.000"	"27.000"	"0.00129493839619997"	""	"0.0001889"	"0.0007405"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSDGVAVLK"	"[K].lSDGVAVLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"680.43439"	"1359.86150"	"1359.86117"	"0.24"	"0.00016"	"14/66"	"14"	"66"	"4768966.30957031"	"HCD"	"MS2"	"28.81193"	"359.6"	"100.000"	"45.7914"	"13125"	"13125"	"13103"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"499.4"	""	"490.6"	""	"486.2"	""	"618.6"	""	"653.4"	"659.7"	""	"568"	"37"	"34.000"	"27.000"	"0.00593360101162548"	""	"0.0001889"	"0.0004421"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEQGK"	"[R].lITLEQGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"680.43439"	"1359.86150"	"1359.86117"	"0.24"	"0.00016"	"7/64"	"7"	"64"	"7730599.53851318"	"HCD"	"MS2"	"22.61006"	"542.6"	"100.000"	"43.5111"	"12199"	"12199"	"12186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"880.0"	""	"823.7"	""	"815.5"	""	"808.8"	""	"885.2"	"922.9"	""	"568"	"40"	"34.000"	"27.000"	"0.00279459154036162"	""	"0.0001889"	"0.0006706"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSDGVAVLK"	"[K].lSDGVAVLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"680.43457"	"1359.86186"	"1359.86117"	"0.51"	"0.00035"	"7/66"	"7"	"66"	"3593214.25817871"	"HCD"	"MS2"	"32.79165"	"275.2"	"100.000"	"46.0166"	"13266"	"13266"	"13249"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"379.8"	""	"388.2"	""	"375.0"	""	"463.5"	""	"517.6"	"486.0"	""	"562"	"30"	"34.000"	"27.000"	"0.0300404421061567"	""	"0.0001308"	"0.000296"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSDGVAVLK"	"[K].lSDGVAVLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"680.43463"	"1359.86199"	"1359.86117"	"0.60"	"0.00041"	"8/66"	"8"	"66"	"4905288.21136475"	"HCD"	"MS2"	"6.546358"	"357.0"	"100.000"	"46.3215"	"13390"	"13390"	"13376"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"503.7"	"3.5"	"499.7"	""	"551.2"	""	"590.3"	""	"615.6"	"615.2"	""	"562"	"55"	"34.000"	"27.000"	"9.19827352609534E-05"	"24"	"7.476E-05"	"0.0002049"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVTNLDK"	"[R].lVVTNLDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"680.43488"	"1359.86247"	"1359.86117"	"0.96"	"0.00065"	"7/68"	"7"	"68"	"3595781.94598389"	"HCD"	"MS2"	"21.99276"	"245.4"	"100.000"	"44.3001"	"12571"	"12571"	"12540"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"353.3"	""	"330.0"	""	"327.8"	""	"360.3"	"4.9"	"473.2"	"477.2"	""	"562"	"32"	"34.000"	"27.000"	"0.0171279868124487"	"21"	"0.0003571"	"0.001516"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSDGVAVLK"	"[K].lSDGVAVLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"680.43500"	"1359.86272"	"1359.86117"	"1.14"	"0.00077"	"8/66"	"8"	"66"	"3634760.14306641"	"HCD"	"MS2"	"8.110252"	"284.2"	"100.000"	"46.0942"	"13249"	"13249"	"13229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"398.1"	""	"382.4"	""	"430.7"	""	"448.9"	""	"505.5"	"527.9"	""	"562"	"57"	"34.000"	"27.000"	"6.07723905167293E-05"	"25"	"7.476E-05"	"0.0001936"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFLVALGK"	"[R].gPFLVALGk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"2"	"2"	"0.4571"	"0.0000"	"1"	"1"	"1"	"680.44116"	"1359.87505"	"1359.87643"	"-1.02"	"-0.00069"	"7/66"	"7"	"66"	"3340246.22485352"	"HCD"	"MS2"	"8.041801"	"234.2"	"100.000"	"61.6417"	"19623"	"19623"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.7"	""	"295.6"	""	"320.7"	""	"397.6"	"2.2"	"459.8"	"456.8"	""	"388"	"35"	"32.000"	"25.000"	"0.00637972163899407"	""	"7.476E-05"	"0.0002039"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFLVALGK"	"[R].gPFLVALGk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"680.44147"	"1359.87566"	"1359.87643"	"-0.57"	"-0.00039"	"14/66"	"14"	"66"	"5112614.00897217"	"HCD"	"MS2"	"14.77513"	"345.6"	"100.000"	"61.1895"	"19386"	"19386"	"19369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"441.8"	""	"486.2"	""	"512.8"	""	"570.9"	""	"644.5"	"619.2"	""	"388"	"43"	"32.000"	"25.000"	"0.000924276114402506"	"24"	"0.0001308"	"0.0002343"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFLVALGK"	"[R].gPFLVALGk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"680.44153"	"1359.87578"	"1359.87643"	"-0.48"	"-0.00032"	"14/66"	"14"	"66"	"4794691.14880371"	"HCD"	"MS2"	"18.64422"	"310.2"	"100.000"	"61.3279"	"19495"	"19495"	"19475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"389.5"	""	"441.1"	""	"452.8"	""	"506.2"	"3.7"	"582.4"	"564.5"	""	"388"	"45"	"32.000"	"25.000"	"0.000595390265747884"	"25"	"0"	"0.0001675"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFLVALGK"	"[R].gPFLVALGk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"680.44238"	"1359.87749"	"1359.87643"	"0.78"	"0.00053"	"12/66"	"12"	"66"	"2908725.24523926"	"HCD"	"MS2"	"18.30785"	"200.1"	"100.000"	"61.5078"	"19515"	"19515"	"19497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.3"	""	"243.1"	""	"283.3"	""	"343.0"	"3.1"	"404.2"	"386.7"	""	"392"	"19"	"32.000"	"25.000"	"0.225038109813389"	""	"0.0003839"	"0.001899"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELITILEK"	"[-].mELITILEk.[T]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"680.89966"	"1360.79204"	"1360.79591"	"-2.84"	"-0.00193"	"4/76"	"4"	"76"	"182384.086425781"	"HCD"	"MS2"	"20.39789"	"5.1"	"100.000"	"104.4558"	"35139"	"35139"	"35136"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.5"	""	"4.6"	""	"8.6"	""	"7.9"	""	"9.9"	"8.2"	""	"827"	"17"	"36.000"	"29.000"	"0.846204857285652"	"18"	"0.0009727"	"0.01076"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELITILEK"	"[-].mELITILEk.[T]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.90070"	"1360.79411"	"1360.79591"	"-1.32"	"-0.00090"	"8/76"	"8"	"76"	"148623.448730469"	"HCD"	"MS2"	"14.92754"	"6.3"	"100.000"	"104.2669"	"35097"	"35097"	"35094"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"8.7"	""	"11.7"	""	"6.8"	""	"9.6"	"12.2"	""	"943"	"18"	"36.000"	"29.000"	"0.828860983981524"	"14"	"0.0004557"	"0.00256"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELITILEK"	"[-].mELITILEk.[T]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"680.90143"	"1360.79558"	"1360.79591"	"-0.24"	"-0.00016"	"6/76"	"6"	"76"	"149990.88873291"	"HCD"	"MS2"	"5.727906"	"6.1"	"100.000"	"104.7158"	"35185"	"35185"	"35182"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.4"	""	"8.4"	""	"10.4"	""	"8.3"	""	"8.6"	"10.8"	""	"907"	"54"	"36.000"	"29.000"	"0.00017765494126838"	""	"0.0001889"	"0.0004948"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELITILEK"	"[-].mELITILEk.[T]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"680.90155"	"1360.79582"	"1360.79591"	"-0.06"	"-0.00004"	"6/76"	"6"	"76"	"225854.244262695"	"HCD"	"MS2"	"7.295273"	"6.5"	"100.000"	"104.5242"	"35150"	"35150"	"35147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.8"	""	"8.0"	""	"13.2"	""	"8.5"	""	"10.0"	"12.5"	""	"907"	"46"	"36.000"	"29.000"	"0.00111834883943577"	"29"	"0.0001889"	"0.0004211"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSANGEAK"	"[K].iLSANGEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"680.90613"	"1360.80498"	"1360.82004"	"-11.06"	"-0.00753"	"7/80"	"7"	"80"	"1718954.17700195"	"HCD"	"MS2"	"0"	"155.1"	"100.000"	"41.9186"	"11559"	"11559"	"11544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.6"	""	"191.6"	""	"180.9"	""	"262.6"	""	"306.4"	"350.5"	""	"890"	"11"	"36.000"	"29.000"	"3.72700530546463"	"16"	"0.009861"	"0.4463"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIPVVAEK"	"[K].mIPVVAEk.[Y]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"680.91656"	"1360.82585"	"1360.82743"	"-1.16"	"-0.00079"	"7/56"	"7"	"56"	"6248071.63568115"	"HCD"	"MS2"	"35.3355"	"367.0"	"100.000"	"38.8849"	"10320"	"10320"	"10294"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"474.7"	""	"439.1"	""	"473.5"	""	"779.6"	"4.7"	"620.3"	"684.8"	""	"698"	"32"	"35.000"	"28.000"	"0.0245372239639458"	"18"	"0.001718"	"0.02372"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIPVVAEK"	"[K].mIPVVAEk.[Y]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"680.91699"	"1360.82671"	"1360.82743"	"-0.53"	"-0.00036"	"7/56"	"7"	"56"	"6609291.27331543"	"HCD"	"MS2"	"24.18103"	"380.8"	"100.000"	"38.9916"	"10407"	"10407"	"10382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"498.0"	""	"435.0"	""	"517.8"	""	"802.4"	"2.7"	"637.8"	"712.6"	""	"685"	"33"	"35.000"	"28.000"	"0.0192601903877694"	"18"	"0.002265"	"0.03312"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQPAFALK"	"[K].qQPAFALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"680.92065"	"1360.83403"	"1360.83529"	"-0.93"	"-0.00063"	"7/72"	"7"	"72"	"7392177.24865723"	"HCD"	"MS2"	"2.3795"	"492.6"	"86.521"	"39.5747"	"10603"	"10603"	"10582"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"815.3"	""	"722.5"	""	"629.3"	""	"889.0"	"1.1"	"796.7"	"803.5"	""	"672"	"40"	"35.000"	"28.000"	"0.00343035666525781"	"22"	"0.0001889"	"0.0008201"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQPAFALK"	"[K].qQPAFALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"680.92072"	"1360.83415"	"1360.83529"	"-0.84"	"-0.00057"	"7/72"	"7"	"72"	"27381925.2034912"	"HCD"	"MS2"	"0"	"1212.8"	"69.868"	"39.2630"	"10475"	"10475"	"10454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2502.1"	""	"1850.4"	""	"1498.0"	""	"2346.1"	""	"1566.7"	"1671.5"	""	"672"	"43"	"35.000"	"28.000"	"0.00179200524883841"	"24"	"0.0002277"	"0.001321"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQPAFALK"	"[K].qQPAFALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"680.92078"	"1360.83428"	"1360.83529"	"-0.75"	"-0.00051"	"7/72"	"7"	"72"	"12260169.8820801"	"HCD"	"MS2"	"0"	"394.6"	"43.285"	"39.6383"	"10672"	"10672"	"10654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"757.1"	""	"572.2"	""	"500.2"	""	"715.6"	"2.1"	"593.0"	"585.1"	""	"672"	"46"	"35.000"	"28.000"	"0.000925420844321623"	"24"	"0.0002277"	"0.001241"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQPAFALK"	"[K].qQPAFALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"680.92114"	"1360.83501"	"1360.83529"	"-0.21"	"-0.00014"	"12/72"	"12"	"72"	"17267836.503479"	"HCD"	"MS2"	"3.11787"	"985.0"	"85.218"	"39.3288"	"10545"	"10545"	"10526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2011.9"	""	"1509.3"	""	"1227.8"	""	"1894.4"	"0.4"	"1267.4"	"1374.8"	""	"654"	"39"	"35.000"	"28.000"	"0.00453469156041108"	"25"	"0.0002277"	"0.00118"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQPAFALK"	"[K].qQPAFALk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"454.28339"	"1360.83561"	"1360.83529"	"0.23"	"0.00010"	"6/72"	"6"	"72"	"10468192.4585571"	"HCD"	"MS2"	"6.779651"	"323.5"	"74.475"	"39.4259"	"10542"	"10542"	"10518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"570.5"	""	"468.6"	""	"422.9"	""	"595.6"	"2.6"	"477.2"	"518.1"	""	"657"	"38"	"35.000"	"28.000"	"0.00514677726530528"	"22"	"0.0001889"	"0.0007535"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTATQLLK"	"[R].qTATQLLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"680.93127"	"1360.85527"	"1360.85642"	"-0.84"	"-0.00057"	"7/74"	"7"	"74"	"4429343.91888428"	"HCD"	"MS2"	"25.09323"	"375.4"	"100.000"	"36.3243"	"9269"	"9269"	"9242"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"499.5"	""	"439.6"	""	"499.0"	""	"643.9"	"1.5"	"768.1"	"710.2"	""	"451"	"43"	"33.000"	"26.000"	"0.00126516318595322"	"25"	"0.0001889"	"0.0005372"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLVSNLK"	"[R].tQLVSNLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"680.93152"	"1360.85576"	"1360.85642"	"-0.49"	"-0.00033"	"4/76"	"4"	"76"	"504663.623657227"	"HCD"	"MS2"	"16.56685"	"55.1"	"100.000"	"34.9371"	"8700"	"8700"	"8670"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.0"	""	"77.7"	""	"76.4"	""	"93.0"	"0.7"	"103.3"	"99.8"	""	"453"	"7"	"33.000"	"26.000"	"4.96670317856877"	"17"	"0.008737"	"0.3851"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLVSNLK"	"[R].tQLVSNLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"680.93152"	"1360.85576"	"1360.85642"	"-0.49"	"-0.00033"	"5/76"	"5"	"76"	"1138100.434021"	"HCD"	"MS2"	"28.05895"	"110.4"	"100.000"	"34.9350"	"8742"	"8742"	"8714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.9"	""	"155.0"	""	"173.8"	""	"157.4"	""	"201.1"	"207.3"	""	"453"	"18"	"33.000"	"26.000"	"0.341246500491297"	"20"	"0.003914"	"0.09885"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTATQLLK"	"[R].qTATQLLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"680.93152"	"1360.85576"	"1360.85642"	"-0.49"	"-0.00033"	"7/74"	"7"	"74"	"4959670.10333252"	"HCD"	"MS2"	"6.253012"	"418.2"	"100.000"	"36.4090"	"9347"	"9347"	"9321"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"567.8"	""	"480.5"	""	"550.5"	""	"757.6"	""	"824.9"	"785.3"	""	"453"	"43"	"33.000"	"26.000"	"0.00127077366571355"	"25"	"0.0001889"	"0.0005251"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLVSNLK"	"[R].tQLVSNLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"680.93201"	"1360.85674"	"1360.85642"	"0.23"	"0.00016"	"7/76"	"7"	"76"	"18510976.8905029"	"HCD"	"MS2"	"18.93325"	"907.7"	"67.368"	"38.6170"	"10210"	"10210"	"10183"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1406.3"	""	"1295.7"	""	"1387.6"	""	"1356.6"	"13.7"	"1467.6"	"1658.6"	""	"452"	"46"	"33.000"	"26.000"	"0.000567686333521165"	""	"0.0002277"	"0.001128"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLIPIGK"	"[K].dFLIPIGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"680.93341"	"1360.85954"	"1360.86044"	"-0.66"	"-0.00045"	"7/56"	"7"	"56"	"11192638.9904175"	"HCD"	"MS2"	"8.9374"	"597.7"	"100.000"	"63.8751"	"20535"	"20535"	"20515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"846.6"	""	"722.6"	""	"747.8"	""	"1035.6"	""	"1134.5"	"1185.8"	""	"384"	"46"	"32.000"	"25.000"	"0.000523963734299144"	""	"0.0001889"	"0.00066"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLIPIGK"	"[K].dFLIPIGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"454.29141"	"1360.85968"	"1360.86044"	"-0.56"	"-0.00025"	"7/56"	"7"	"56"	"4320703.16485596"	"HCD"	"MS2"	"25.64228"	"145.6"	"100.000"	"63.9278"	"20557"	"20557"	"20531"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.2"	""	"169.4"	""	"182.6"	""	"252.6"	""	"291.4"	"281.0"	""	"384"	"20"	"32.000"	"25.000"	"0.212471766523712"	"16"	"0.0008731"	"0.0089"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLIPIGK"	"[K].dFLIPIGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"680.93408"	"1360.86089"	"1360.86044"	"0.33"	"0.00022"	"12/56"	"12"	"56"	"10821761.3095093"	"HCD"	"MS2"	"11.4898"	"605.5"	"100.000"	"63.8238"	"20461"	"20461"	"20441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"844.6"	""	"723.7"	""	"754.3"	""	"1019.6"	"0.5"	"1185.2"	"1216.3"	""	"389"	"37"	"32.000"	"25.000"	"0.00383636222174339"	""	"0.0001889"	"0.001053"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLIPIGK"	"[K].dFLIPIGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"454.29184"	"1360.86097"	"1360.86044"	"0.38"	"0.00017"	"8/56"	"8"	"56"	"4011525.47106934"	"HCD"	"MS2"	"21.28895"	"134.0"	"100.000"	"63.8487"	"20472"	"20472"	"20441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.6"	""	"173.7"	""	"168.5"	""	"225.5"	"1.1"	"253.1"	"263.3"	""	"389"	"30"	"32.000"	"25.000"	"0.0187464745094862"	"24"	"0.000523"	"0.003161"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSLEVIK"	"[R].iTSLEVIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06765"	"Platelet factor 4 OS=Rattus norvegicus OX=10116 GN=Pf4 PE=1 SV=1"	"P06765"	"Platelet factor 4 OS=Rattus norvegicus OX=10116 GN=Pf4 PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"680.94403"	"1360.88078"	"1360.88157"	"-0.58"	"-0.00039"	"14/62"	"14"	"62"	"8588986.35021973"	"HCD"	"MS2"	"5.312201"	"561.4"	"100.000"	"51.9094"	"15619"	"15619"	"15602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"720.8"	""	"887.4"	""	"797.6"	""	"720.8"	"5.3"	"995.1"	"1195.3"	""	"274"	"43"	"31.000"	"24.000"	"0.000705863243077006"	""	"0.0002277"	"0.001127"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSLEVIK"	"[R].iTSLEVIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06765"	"Platelet factor 4 OS=Rattus norvegicus OX=10116 GN=Pf4 PE=1 SV=1"	"P06765"	"Platelet factor 4 OS=Rattus norvegicus OX=10116 GN=Pf4 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"680.94458"	"1360.88188"	"1360.88157"	"0.23"	"0.00015"	"14/62"	"14"	"62"	"8471332.28594971"	"HCD"	"MS2"	"3.060554"	"568.5"	"100.000"	"52.1097"	"15751"	"15751"	"15734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"742.0"	""	"890.0"	""	"796.8"	""	"722.1"	"7.2"	"1006.9"	"1224.6"	""	"273"	"45"	"31.000"	"24.000"	"0.000483206370578889"	""	"0.0001889"	"0.001067"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"681.34753"	"1361.68779"	"1361.68986"	"-1.52"	"-0.00103"	"15/84"	"15"	"84"	"9786644.06188965"	"HCD"	"MS2"	"0"	"531.8"	"100.000"	"33.1432"	"7976"	"7976"	"7960"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"686.8"	""	"790.5"	""	"788.9"	""	"741.2"	""	"930.1"	"1107.0"	""	"662"	"52"	"35.000"	"28.000"	"0.000204092945616151"	"20"	"0"	"0.0001291"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"681.34772"	"1361.68816"	"1361.68986"	"-1.25"	"-0.00085"	"15/84"	"15"	"84"	"8735496.08856201"	"HCD"	"MS2"	"0"	"455.6"	"100.000"	"33.2089"	"8045"	"8045"	"8033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"593.2"	""	"662.9"	""	"659.9"	""	"623.3"	""	"843.5"	"937.8"	""	"664"	"52"	"35.000"	"28.000"	"0.00020283275226865"	"20"	"0"	"0.0001521"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLmYAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"681.37939"	"1361.75151"	"1361.75393"	"-1.78"	"-0.00121"	"6/48"	"6"	"48"	"1143902.01184082"	"HCD"	"MS2"	"0"	"104.6"	"100.000"	"54.0501"	"16527"	"16527"	"16507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.9"	""	"137.2"	""	"149.8"	""	"130.1"	"0.0"	"215.5"	"203.3"	""	"926"	"20"	"36.000"	"29.000"	"0.49497240908009"	"17"	"0.006001"	"0.204"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLmYAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.37946"	"1361.75163"	"1361.75393"	"-1.69"	"-0.00115"	"6/48"	"6"	"48"	"1256215.84320068"	"HCD"	"MS2"	"0"	"115.7"	"100.000"	"54.3733"	"16658"	"16658"	"16637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.3"	""	"142.4"	""	"160.9"	""	"159.4"	"2.8"	"243.0"	"222.9"	""	"931"	"17"	"36.000"	"29.000"	"0.901404424217146"	"14"	"0.003914"	"0.09919"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLmYAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.38019"	"1361.75310"	"1361.75393"	"-0.61"	"-0.00042"	"5/48"	"5"	"48"	"1435223.93933105"	"HCD"	"MS2"	"18.80573"	"128.0"	"100.000"	"54.3322"	"16588"	"16588"	"16570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.8"	""	"174.3"	""	"189.9"	""	"191.0"	"3.5"	"236.3"	"242.5"	""	"958"	"14"	"36.000"	"29.000"	"1.71133689474774"	"13"	"0.005792"	"0.1869"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLmYAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.38025"	"1361.75322"	"1361.75393"	"-0.52"	"-0.00035"	"9/48"	"9"	"48"	"2909638.87896729"	"HCD"	"MS2"	"24.78387"	"210.9"	"100.000"	"51.1085"	"15341"	"15341"	"15318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"291.0"	""	"276.8"	""	"309.3"	""	"294.4"	"0.5"	"420.1"	"407.6"	""	"958"	"18"	"36.000"	"29.000"	"0.690773253380412"	"14"	"0.002829"	"0.04609"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLmYAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.38031"	"1361.75334"	"1361.75393"	"-0.43"	"-0.00029"	"9/48"	"9"	"48"	"3785277.30944824"	"HCD"	"MS2"	"27.87095"	"275.5"	"100.000"	"47.1841"	"13695"	"13695"	"13672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"389.4"	""	"371.5"	""	"348.3"	""	"492.6"	""	"515.3"	"494.6"	""	"958"	"9"	"36.000"	"29.000"	"6.10007975806981"	"13"	"0.0008731"	"0.008869"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLmYAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"681.38037"	"1361.75347"	"1361.75393"	"-0.34"	"-0.00023"	"6/48"	"6"	"48"	"28475191.6538086"	"HCD"	"MS2"	"0"	"404.0"	"28.757"	"46.8590"	"13562"	"13562"	"13544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"444.6"	""	"416.1"	""	"482.9"	""	"1055.0"	""	"720.3"	"712.9"	""	"921"	"19"	"36.000"	"29.000"	"0.637132317516505"	"17"	"0.002424"	"0.03605"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLmYAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"681.38043"	"1361.75359"	"1361.75393"	"-0.25"	"-0.00017"	"6/48"	"6"	"48"	"32761879.4691162"	"HCD"	"MS2"	"0"	"480.2"	"31.906"	"47.1138"	"13715"	"13715"	"13698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"500.8"	""	"499.6"	""	"580.3"	""	"1263.7"	""	"852.9"	"855.8"	""	"921"	"27"	"36.000"	"29.000"	"0.0889671409986293"	"15"	"0.001587"	"0.0212"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLmYAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.38104"	"1361.75481"	"1361.75393"	"0.64"	"0.00044"	"6/48"	"6"	"48"	"4310788.45550537"	"HCD"	"MS2"	"33.63341"	"305.9"	"100.000"	"47.4453"	"13850"	"13850"	"13826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"404.4"	""	"420.4"	""	"383.8"	""	"548.8"	"0.6"	"590.0"	"552.1"	""	"915"	"11"	"36.000"	"29.000"	"3.63405167386359"	"13"	"0.004007"	"0.1031"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLmYAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.38110"	"1361.75493"	"1361.75393"	"0.73"	"0.00050"	"6/48"	"6"	"48"	"9960310.59796143"	"HCD"	"MS2"	"21.3921"	"670.2"	"100.000"	"46.8149"	"13592"	"13592"	"13570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"615.3"	""	"692.1"	""	"722.7"	""	"2108.1"	"3.4"	"1177.5"	"1033.2"	""	"919"	"18"	"36.000"	"29.000"	"0.757330618905972"	"14"	"0.0008453"	"0.007951"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLMYAK"	"[K].fDLmYAk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.38232"	"1361.75737"	"1361.75393"	"2.53"	"0.00172"	"6/48"	"6"	"48"	"10974807.4223633"	"HCD"	"MS2"	"14.06043"	"742.3"	"100.000"	"46.5552"	"13438"	"13438"	"13416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"706.5"	""	"802.5"	""	"806.8"	""	"2288.3"	""	"1304.3"	"1130.0"	""	"946"	"14"	"36.000"	"29.000"	"1.94473818082439"	"13"	"0.00162"	"0.02208"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLLLDTDTR"	"[R].wLLLDTDTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"681.38434"	"1361.76140"	"1361.76263"	"-0.90"	"-0.00062"	"6/70"	"6"	"70"	"1030236.28887939"	"HCD"	"MS2"	"28.42676"	"67.2"	"100.000"	"63.2269"	"20271"	"20271"	"20243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.3"	""	"89.3"	""	"86.7"	""	"121.7"	""	"124.7"	"136.0"	""	"940"	"24"	"36.000"	"29.000"	"0.174621557675671"	"20"	"0.000494"	"0.002692"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLLLDTDTR"	"[R].wLLLDTDTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"681.38470"	"1361.76213"	"1361.76263"	"-0.37"	"-0.00025"	"6/70"	"6"	"70"	"5507460.8270874"	"HCD"	"MS2"	"37.45308"	"234.1"	"100.000"	"62.8590"	"20120"	"20120"	"20099"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"338.6"	""	"313.2"	""	"321.2"	""	"387.9"	"0.1"	"420.9"	"435.9"	""	"931"	"42"	"36.000"	"29.000"	"0.00279846374798466"	"27"	"0.0001308"	"0.0002169"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLLLDTDTR"	"[R].wLLLDTDTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"681.38495"	"1361.76262"	"1361.76263"	"-0.01"	"-0.00001"	"6/70"	"6"	"70"	"5744328.1831665"	"HCD"	"MS2"	"19.14396"	"240.7"	"100.000"	"62.7661"	"20029"	"20029"	"20009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"358.6"	""	"308.0"	""	"350.0"	""	"383.8"	""	"427.7"	"453.6"	""	"927"	"42"	"36.000"	"29.000"	"0.0027482088794283"	"27"	"0.0001308"	"0.0002235"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLLLDTDTR"	"[R].wLLLDTDTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"681.38513"	"1361.76299"	"1361.76263"	"0.26"	"0.00018"	"6/70"	"6"	"70"	"1194871.64868164"	"HCD"	"MS2"	"13.6585"	"72.6"	"100.000"	"63.0881"	"20161"	"20161"	"20137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.4"	""	"100.2"	""	"97.8"	""	"117.6"	"0.3"	"137.5"	"147.2"	""	"967"	"27"	"36.000"	"29.000"	"0.106511494488635"	"20"	"0.0007793"	"0.007342"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEHFIK"	"[R].vMEHFIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"681.40302"	"1361.79875"	"1361.80155"	"-2.05"	"-0.00140"	"6/48"	"6"	"48"	"666806.128112793"	"HCD"	"MS2"	"0"	"76.8"	"100.000"	"37.8443"	"9893"	"9893"	"9863"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.8"	""	"98.1"	""	"114.1"	""	"129.3"	"0.1"	"138.7"	"148.4"	""	"811"	"12"	"36.000"	"29.000"	"2.6545496858428"	"22"	"0.00103"	"0.01277"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEHFIK"	"[R].vMEHFIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"454.60464"	"1361.79938"	"1361.80155"	"-1.59"	"-0.00072"	"8/48"	"8"	"48"	"62621016.0688477"	"HCD"	"MS2"	"12.19772"	"726.5"	"32.244"	"37.5810"	"9785"	"9785"	"9768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1173.0"	""	"1038.2"	""	"1206.2"	""	"797.1"	"1.3"	"1274.0"	"1386.0"	""	"855"	"32"	"36.000"	"29.000"	"0.0244870303246442"	""	"0.0001889"	"0.0007323"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEHFIK"	"[R].vMEHFIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.4062"	"0.0000"	"1"	"1"	"1"	"454.60471"	"1361.79956"	"1361.80155"	"-1.46"	"-0.00066"	"8/48"	"8"	"48"	"37585038.5863647"	"HCD"	"MS2"	"21.60638"	"1300.1"	"100.000"	"37.6601"	"9860"	"9860"	"9841"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2032.2"	""	"1922.2"	""	"2078.5"	""	"1454.1"	""	"2295.4"	"2532.6"	""	"852"	"32"	"36.000"	"29.000"	"0.026940744868627"	""	"0.0001889"	"0.0005228"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEWLTK"	"[R].iNEWLTk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"681.41272"	"1361.81816"	"1361.81931"	"-0.84"	"-0.00057"	"12/64"	"12"	"64"	"9132103.05432129"	"HCD"	"MS2"	"22.51669"	"635.8"	"84.899"	"52.7816"	"15975"	"15975"	"15954"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"793.1"	""	"772.0"	""	"869.9"	""	"1119.4"	"6.5"	"1240.3"	"1229.7"	""	"826"	"31"	"36.000"	"29.000"	"0.0368086637449237"	"24"	"0.0006037"	"0.004034"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNIGVEK"	"[R].fPNIGVEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"681.41290"	"1361.81853"	"1361.81931"	"-0.57"	"-0.00039"	"7/66"	"7"	"66"	"6123083.94445801"	"HCD"	"MS2"	"34.54813"	"433.3"	"100.000"	"47.6600"	"13890"	"13890"	"13864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"501.0"	""	"597.7"	""	"580.0"	""	"708.8"	"2.5"	"872.4"	"850.0"	""	"820"	"29"	"36.000"	"29.000"	"0.0526967530576883"	"23"	"0.0002277"	"0.001219"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEWLTK"	"[R].iNEWLTk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"681.41321"	"1361.81914"	"1361.81931"	"-0.12"	"-0.00008"	"6/64"	"6"	"64"	"9973421.52703857"	"HCD"	"MS2"	"27.89245"	"773.1"	"100.000"	"52.9453"	"16092"	"16092"	"16070"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"971.9"	""	"987.6"	""	"1048.9"	""	"1434.3"	"6.2"	"1440.8"	"1439.3"	""	"820"	"29"	"36.000"	"29.000"	"0.053306952699365"	"22"	"0.0006037"	"0.004845"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNIGVEK"	"[R].fPNIGVEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"681.41345"	"1361.81963"	"1361.81931"	"0.23"	"0.00016"	"5/66"	"5"	"66"	"6737926.40466309"	"HCD"	"MS2"	"28.79201"	"445.5"	"100.000"	"47.9582"	"14060"	"14060"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"536.4"	""	"619.0"	""	"595.2"	""	"694.0"	""	"895.4"	"888.3"	""	"828"	"29"	"36.000"	"29.000"	"0.0540754747686582"	"23"	"0.0001889"	"0.001044"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLTINPAK"	"[K].mLTINPAk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"681.41382"	"1361.82036"	"1361.82268"	"-1.70"	"-0.00116"	"7/62"	"7"	"62"	"1142154.6885376"	"HCD"	"MS2"	"29.80923"	"107.8"	"100.000"	"37.2644"	"9655"	"9655"	"9624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.8"	""	"91.8"	""	"121.6"	""	"250.6"	"0.2"	"232.4"	"220.2"	""	"824"	"18"	"36.000"	"29.000"	"0.68532601195251"	"16"	"0.002297"	"0.03361"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLTINPAK"	"[K].mLTINPAk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.41412"	"1361.82097"	"1361.82268"	"-1.25"	"-0.00085"	"7/62"	"7"	"62"	"1391038.8338623"	"HCD"	"MS2"	"0"	"117.6"	"100.000"	"37.3349"	"9727"	"9727"	"9697"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.2"	""	"112.8"	""	"139.4"	""	"247.6"	"0.7"	"257.7"	"234.0"	""	"823"	"17"	"36.000"	"29.000"	"0.802361052800435"	"14"	"0.00423"	"0.109"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVHLFPK"	"[K].yVHLFPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"454.61597"	"1361.83335"	"1361.83456"	"-0.89"	"-0.00041"	"8/50"	"8"	"50"	"7889773.09136963"	"HCD"	"MS2"	"45.88274"	"308.9"	"100.000"	"40.2217"	"10865"	"10865"	"10837"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.1"	""	"390.3"	""	"357.5"	""	"558.3"	""	"622.4"	"661.1"	""	"671"	"23"	"35.000"	"28.000"	"0.171274427491749"	"20"	"0.0004166"	"0.002255"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVHLFPK"	"[K].yVHLFPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"454.61676"	"1361.83573"	"1361.83456"	"0.85"	"0.00039"	"7/50"	"7"	"50"	"4617779.17669678"	"HCD"	"MS2"	"33.96031"	"183.3"	"100.000"	"40.4758"	"11013"	"11013"	"10989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.2"	""	"223.6"	""	"232.0"	""	"320.8"	""	"364.7"	"392.6"	""	"679"	"13"	"35.000"	"28.000"	"1.81484600015272"	"13"	"0.001058"	"0.01379"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSQLLK"	"[R].dLSSQLLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"681.42322"	"1361.83916"	"1361.84044"	"-0.94"	"-0.00064"	"7/68"	"7"	"68"	"6100975.43139648"	"HCD"	"MS2"	"16.91001"	"443.7"	"100.000"	"44.5665"	"12679"	"12679"	"12659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"637.3"	""	"537.7"	""	"558.5"	""	"794.5"	""	"855.3"	"825.2"	""	"637"	"39"	"35.000"	"28.000"	"0.00361500944791632"	""	"0.0001889"	"0.00106"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSQLLK"	"[R].dLSSQLLk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"681.42426"	"1361.84123"	"1361.84044"	"0.59"	"0.00040"	"7/68"	"7"	"68"	"5594706.06396484"	"HCD"	"MS2"	"0"	"432.4"	"100.000"	"44.3071"	"12524"	"12524"	"12502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"617.0"	""	"521.7"	""	"554.5"	""	"782.1"	"1.0"	"828.5"	"794.2"	""	"618"	"39"	"34.000"	"27.000"	"0.0036137531182514"	""	"0.0001889"	"0.001058"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQWLNEK"	"[R].sQWLNEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P08009; P04905"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08009; P04905"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"681.89111"	"1362.77495"	"1362.77817"	"-2.36"	"-0.00161"	"12/68"	"12"	"68"	"4859432.69287109"	"HCD"	"MS2"	"31.34239"	"398.2"	"100.000"	"37.7634"	"9903"	"9903"	"9873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"703.5"	""	"530.3"	""	"539.5"	""	"559.5"	""	"733.9"	"703.3"	""	"981"	"31"	"36.000"	"29.000"	"0.0420377063085496"	"28"	"0.0006037"	"0.005536"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQWLNEK"	"[R].sQWLNEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P08009; P04905"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08009; P04905"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"681.89172"	"1362.77617"	"1362.77817"	"-1.47"	"-0.00100"	"9/68"	"9"	"68"	"3361303.06304932"	"HCD"	"MS2"	"26.32579"	"312.3"	"100.000"	"37.6908"	"9830"	"9830"	"9800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"499.4"	""	"420.1"	""	"413.5"	""	"462.5"	""	"619.1"	"548.4"	""	"978"	"15"	"36.000"	"29.000"	"1.50767890767193"	"21"	"0.0006037"	"0.005903"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVTYLELLS"	"[K].vPVTYLELLS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPJ9"	"Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"Q5PPJ9"	"Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"681.90570"	"1362.80412"	"1362.80818"	"-2.98"	"-0.00203"	"5/86"	"5"	"86"	"262917.468811035"	"HCD"	"MS2"	"2.642558"	"8.6"	"100.000"	"91.1173"	"31441"	"31441"	"31433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.8"	""	"12.9"	""	"13.0"	""	"14.8"	""	"14.2"	"19.1"	""	"853"	"26"	"36.000"	"29.000"	"0.110896805368999"	""	"0.003107"	"0.05983"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVTYLELLS"	"[K].vPVTYLELLS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPJ9"	"Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"Q5PPJ9"	"Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"681.90662"	"1362.80596"	"1362.80818"	"-1.64"	"-0.00111"	"5/86"	"5"	"86"	"244335.304443359"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"91.2196"	"31504"	"31504"	"31496"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"8.3"	""	"9.3"	""	"10.9"	""	"11.5"	"12.0"	""	"827"	"26"	"36.000"	"29.000"	"0.102914250110977"	"25"	"0.003945"	"0.1008"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVTYLELLS"	"[K].vPVTYLELLS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPJ9"	"Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"Q5PPJ9"	"Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.90778"	"1362.80828"	"1362.80818"	"0.07"	"0.00005"	"6/86"	"6"	"86"	"177446.161804199"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"90.9539"	"31410"	"31410"	"31404"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"8.6"	""	"8.2"	""	"10.6"	""	"6.2"	"9.7"	""	"793"	"29"	"35.000"	"28.000"	"0.046157597066126"	"14"	"0.003698"	"0.08605"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVTYLELLS"	"[K].vPVTYLELLS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPJ9"	"Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"Q5PPJ9"	"Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"681.90802"	"1362.80876"	"1362.80818"	"0.42"	"0.00029"	"5/86"	"5"	"86"	"169871.579467773"	"HCD"	"MS2"	"11.09656"	"4.5"	"100.000"	"90.8441"	"31342"	"31342"	"31334"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"5.7"	""	"6.3"	""	"8.5"	""	"9.4"	"7.4"	""	"834"	"28"	"36.000"	"29.000"	"0.0599979007132687"	"15"	"0.004538"	"0.1316"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAQGSLSLK"	"[K].tAQGSLSLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"681.92133"	"1362.83537"	"1362.83569"	"-0.23"	"-0.00016"	"8/88"	"8"	"88"	"1153743.23565674"	"HCD"	"MS2"	"0"	"106.9"	"100.000"	"35.0884"	"8762"	"8762"	"8734"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.2"	""	"121.1"	""	"144.4"	""	"182.9"	""	"200.0"	"221.5"	""	"535"	"45"	"34.000"	"27.000"	"0.000826654028197386"	""	"0"	"9.207E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLLFLGK"	"[K].vDLLFLGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"681.94092"	"1362.87456"	"1362.87609"	"-1.13"	"-0.00077"	"7/56"	"7"	"56"	"1665538.42681885"	"HCD"	"MS2"	"8.678408"	"121.7"	"100.000"	"74.6606"	"24929"	"24929"	"24911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.0"	""	"171.9"	""	"178.6"	""	"193.3"	""	"205.6"	"217.9"	""	"242"	"43"	"30.000"	"23.000"	"0.000617711049970241"	"22"	"0.0001308"	"0.0002705"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLLFLGK"	"[K].vDLLFLGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"454.96304"	"1362.87458"	"1362.87609"	"-1.11"	"-0.00051"	"8/56"	"8"	"56"	"1623162.54705811"	"HCD"	"MS2"	"14.94994"	"63.3"	"100.000"	"74.4483"	"24843"	"24843"	"24815"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.5"	""	"90.8"	""	"93.6"	""	"91.1"	""	"98.2"	"119.2"	""	"242"	"31"	"30.000"	"23.000"	"0.00976754386601094"	"23"	"0.0004166"	"0.002344"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLLFLGK"	"[K].vDLLFLGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"681.94122"	"1362.87517"	"1362.87609"	"-0.68"	"-0.00046"	"7/56"	"7"	"56"	"6862080.03515625"	"HCD"	"MS2"	"1.054336"	"469.0"	"100.000"	"74.3423"	"24800"	"24800"	"24783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"799.4"	""	"695.3"	""	"713.4"	""	"729.1"	"3.5"	"751.2"	"740.0"	""	"242"	"47"	"30.000"	"23.000"	"0.000241983286225562"	"23"	"0.0001889"	"0.0007721"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLLFLGK"	"[K].vDLLFLGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"454.96332"	"1362.87540"	"1362.87609"	"-0.51"	"-0.00023"	"8/56"	"8"	"56"	"1481816.69787598"	"HCD"	"MS2"	"31.35818"	"61.3"	"100.000"	"74.3472"	"24750"	"24750"	"24721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.9"	""	"88.0"	""	"98.1"	""	"96.8"	"0.7"	"84.7"	"110.8"	""	"242"	"29"	"30.000"	"23.000"	"0.0143148028242745"	"22"	"0.000494"	"0.002656"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLLFLGK"	"[K].vDLLFLGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"681.94171"	"1362.87615"	"1362.87609"	"0.04"	"0.00003"	"7/56"	"7"	"56"	"1848070.61865234"	"HCD"	"MS2"	"6.445076"	"140.7"	"100.000"	"74.6378"	"24868"	"24868"	"24849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"216.4"	""	"188.9"	""	"229.6"	""	"221.9"	"0.2"	"232.7"	"240.8"	""	"242"	"45"	"30.000"	"23.000"	"0.000404375998431598"	"20"	"0.0001859"	"0.000332"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLLFLGK"	"[K].vDLLFLGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"681.94196"	"1362.87663"	"1362.87609"	"0.40"	"0.00027"	"7/56"	"7"	"56"	"5432588.05084229"	"HCD"	"MS2"	"3.58931"	"378.2"	"100.000"	"74.3173"	"24738"	"24738"	"24721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"645.8"	""	"550.1"	""	"575.4"	""	"607.9"	""	"594.6"	"601.6"	""	"254"	"45"	"31.000"	"24.000"	"0.000393372251000505"	"22"	"0.0001889"	"0.0006434"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEELTNLIR"	"[R].fEELTNLIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"682.39209"	"1363.77690"	"1363.77828"	"-1.01"	"-0.00069"	"6/76"	"6"	"76"	"1035825.90710449"	"HCD"	"MS2"	"26.29782"	"81.0"	"100.000"	"66.7298"	"21648"	"21648"	"21625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.8"	""	"106.3"	""	"126.9"	""	"131.9"	"2.4"	"143.0"	"156.0"	""	"969"	"30"	"36.000"	"29.000"	"0.0438827445135178"	"20"	"7.476E-05"	"0.0001881"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEELTNLIR"	"[R].fEELTNLIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"682.39215"	"1363.77703"	"1363.77828"	"-0.92"	"-0.00063"	"6/76"	"6"	"76"	"1427586.49224854"	"HCD"	"MS2"	"26.87336"	"96.7"	"100.000"	"66.6254"	"21658"	"21658"	"21635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.7"	""	"126.3"	""	"143.9"	""	"158.5"	"2.1"	"183.1"	"168.6"	""	"969"	"31"	"36.000"	"29.000"	"0.0402989547099244"	"20"	"0"	"0.0001666"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVWSELSK"	"[K].gVWSELSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"682.40222"	"1363.79717"	"1363.79857"	"-1.03"	"-0.00070"	"7/62"	"7"	"62"	"4728242.87365723"	"HCD"	"MS2"	"0"	"384.3"	"100.000"	"46.2940"	"13379"	"13379"	"13360"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"493.8"	""	"503.5"	""	"504.2"	""	"629.7"	"0.2"	"760.5"	"753.4"	""	"831"	"41"	"36.000"	"29.000"	"0.00306599207618642"	"24"	"0.0001889"	"0.0005419"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVWSELSK"	"[K].gVWSELSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"682.40234"	"1363.79741"	"1363.79857"	"-0.85"	"-0.00058"	"14/62"	"14"	"62"	"2217785.51055908"	"HCD"	"MS2"	"0"	"181.9"	"100.000"	"46.3279"	"13345"	"13345"	"13320"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.2"	""	"220.5"	""	"222.9"	""	"322.1"	"5.5"	"357.0"	"375.8"	""	"831"	"27"	"36.000"	"29.000"	"0.0817656753373195"	"19"	"0.0001889"	"0.0007767"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDVMIAGK"	"[R].aTDVMIAGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"682.40295"	"1363.79863"	"1363.80194"	"-2.43"	"-0.00166"	"8/66"	"8"	"66"	"2251862.78570557"	"HCD"	"MS2"	"0"	"222.2"	"100.000"	"38.5367"	"10177"	"10177"	"10151"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"313.4"	""	"325.0"	""	"327.3"	""	"347.6"	""	"409.0"	"386.8"	""	"851"	"21"	"36.000"	"29.000"	"0.302621350059491"	"18"	"0.0001889"	"0.0006607"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVWSELSK"	"[K].gVWSELSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"682.40332"	"1363.79936"	"1363.79857"	"0.58"	"0.00040"	"7/62"	"7"	"62"	"4690183.39093018"	"HCD"	"MS2"	"9.572236"	"376.2"	"100.000"	"46.0165"	"13217"	"13217"	"13197"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"486.4"	""	"478.9"	""	"505.4"	""	"649.8"	""	"725.8"	"723.3"	""	"859"	"39"	"36.000"	"29.000"	"0.0052355603273823"	"24"	"0.0001889"	"0.0005748"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDVMIAGK"	"[R].aTDVMIAGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"682.40350"	"1363.79973"	"1363.80194"	"-1.62"	"-0.00111"	"13/66"	"13"	"66"	"1317511.7991333"	"HCD"	"MS2"	"100"	"135.7"	"100.000"	"38.6181"	"10254"	"10254"	"10225"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.1"	""	"202.3"	""	"207.1"	""	"198.3"	""	"247.7"	"233.9"	""	"859"	"26"	"36.000"	"29.000"	"0.114805625252089"	"18"	"0.0001889"	"0.0009684"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIASMTVGK"	"[K].vIASMTVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"682.42273"	"1363.83818"	"1363.83833"	"-0.11"	"-0.00007"	"8/68"	"8"	"68"	"3685383.21765137"	"HCD"	"MS2"	"30.30391"	"280.4"	"100.000"	"42.7214"	"11930"	"11930"	"11907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.2"	""	"419.6"	""	"441.2"	""	"360.9"	"3.1"	"518.7"	"515.1"	""	"437"	"46"	"33.000"	"26.000"	"0.00054632546153067"	""	"0"	"0.0001271"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FWVNVIK"	"[R].fWVNVIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZPX4"	"Plexin-A3 OS=Rattus norvegicus OX=10116 GN=Plxna3 PE=3 SV=1"	"D3ZPX4"	"Plexin-A3 OS=Rattus norvegicus OX=10116 GN=Plxna3 PE=3 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"682.42914"	"1363.85100"	"1363.85021"	"0.58"	"0.00039"	"6/56"	"6"	"56"	"934054.10357666"	"HCD"	"MS2"	"33.13691"	"82.9"	"100.000"	"65.3476"	"21137"	"21137"	"21107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.8"	""	"121.2"	""	"127.1"	""	"128.3"	"7.5"	"145.2"	"138.7"	""	"354"	"9"	"32.000"	"25.000"	"2.08436257313183"	"19"	"0.0006037"	"0.003863"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVVPPLPGK"	"[K].vVVPPLPGk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.45740"	"1363.90752"	"1363.90773"	"-0.15"	"-0.00011"	"7/66"	"7"	"66"	"18181760.8117676"	"HCD"	"MS2"	"31.87758"	"910.4"	"100.000"	"49.5744"	"14670"	"14670"	"14639"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1384.7"	""	"1348.3"	""	"1406.9"	""	"1412.2"	"29.9"	"1496.7"	"1531.9"	""	"66"	"37"	"25.000"	"18.000"	"0.000653903918515682"	"15"	"0.007905"	"0.3246"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGWALNMK"	"[R].sGWALNMk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"682.89136"	"1364.77544"	"1364.77606"	"-0.46"	"-0.00031"	"11/60"	"11"	"60"	"3158511.96478271"	"HCD"	"MS2"	"31.22034"	"302.0"	"100.000"	"45.2621"	"12962"	"12962"	"12939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"470.2"	""	"449.8"	""	"420.7"	""	"419.3"	"11.8"	"529.2"	"558.7"	""	"968"	"23"	"36.000"	"29.000"	"0.219202428673352"	"24"	"0.0001889"	"0.0006828"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEMk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.89600"	"1364.78472"	"1364.78596"	"-0.91"	"-0.00062"	"7/60"	"7"	"60"	"2522593.84185791"	"HCD"	"MS2"	"100"	"263.3"	"100.000"	"41.5038"	"11435"	"11435"	"11405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.2"	""	"392.6"	""	"421.0"	""	"312.9"	""	"467.3"	"550.5"	""	"941"	"17"	"36.000"	"29.000"	"0.938770919192858"	"14"	"0.0001889"	"0.0008679"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEMk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"682.89691"	"1364.78655"	"1364.78596"	"0.43"	"0.00029"	"12/60"	"12"	"60"	"2987469.59967041"	"HCD"	"MS2"	"0"	"309.4"	"100.000"	"41.3707"	"11336"	"11336"	"11312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"445.4"	""	"449.1"	""	"467.1"	""	"413.3"	""	"553.1"	"608.1"	""	"923"	"19"	"36.000"	"29.000"	"0.537244162572942"	"21"	"0.0002277"	"0.001196"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGWLFGAK"	"[R].gAGWLFGAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"682.90723"	"1364.80718"	"1364.80908"	"-1.39"	"-0.00095"	"11/66"	"11"	"66"	"6340244.27612305"	"HCD"	"MS2"	"73.09855"	"470.8"	"100.000"	"56.6686"	"17597"	"17597"	"17573"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"634.3"	""	"646.5"	""	"643.7"	""	"686.3"	""	"904.0"	"954.5"	""	"730"	"15"	"35.000"	"28.000"	"1.17298609660371"	"19"	"0.0001889"	"0.0004183"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGWLFGAK"	"[R].gAGWLFGAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"682.90735"	"1364.80742"	"1364.80908"	"-1.21"	"-0.00083"	"10/66"	"10"	"66"	"4207067.66589355"	"HCD"	"MS2"	"75.50147"	"336.7"	"100.000"	"56.4401"	"17450"	"17450"	"17419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"437.7"	""	"478.6"	""	"476.0"	""	"540.0"	""	"624.3"	"642.7"	""	"729"	"11"	"35.000"	"28.000"	"2.70207582954185"	"20"	"0.0001889"	"0.0005213"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVSVTASGK"	"[R].gTVSVTASGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"682.91064"	"1364.81401"	"1364.81495"	"-0.69"	"-0.00047"	"9/84"	"9"	"84"	"851420.737915039"	"HCD"	"MS2"	"0"	"79.2"	"100.000"	"29.9749"	"6681"	"6681"	"6650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.3"	""	"125.2"	""	"105.1"	""	"128.7"	"1.1"	"141.2"	"149.6"	""	"608"	"55"	"34.000"	"27.000"	"9.5471464293837E-05"	"25"	"0"	"1.965E-05"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLVTMK"	"[K].sLDLVTMk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"682.91449"	"1364.82170"	"1364.82234"	"-0.47"	"-0.00032"	"7/66"	"7"	"66"	"26296909.0577393"	"HCD"	"MS2"	"29.82506"	"658.2"	"37.201"	"49.9002"	"14849"	"14849"	"14830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"912.8"	""	"945.1"	""	"1028.6"	""	"986.1"	""	"1171.7"	"1189.3"	""	"553"	"36"	"34.000"	"27.000"	"0.00658711333277678"	"20"	"0.0003839"	"0.001755"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLVTMK"	"[K].sLDLVTMk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"682.91473"	"1364.82219"	"1364.82234"	"-0.11"	"-0.00008"	"7/66"	"7"	"66"	"28790046.0788574"	"HCD"	"MS2"	"41.70985"	"572.9"	"28.039"	"49.6389"	"14696"	"14696"	"14671"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"847.2"	""	"802.4"	""	"866.6"	""	"863.5"	"0.8"	"1000.7"	"1042.3"	""	"548"	"39"	"34.000"	"27.000"	"0.00342570974279655"	"23"	"0.000523"	"0.002906"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLIAYLK"	"[R].aDLIAYLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"455.62256"	"1364.85312"	"1364.85536"	"-1.64"	"-0.00075"	"6/56"	"6"	"56"	"2325368.12756348"	"HCD"	"MS2"	"3.134999"	"80.7"	"100.000"	"65.5691"	"21227"	"21227"	"21203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.4"	""	"108.3"	""	"132.8"	""	"122.6"	""	"123.7"	"155.1"	""	"303"	"33"	"31.000"	"24.000"	"0.00678285655827189"	"15"	"0.0001889"	"0.0009551"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLIAYLK"	"[R].aDLIAYLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"682.93036"	"1364.85344"	"1364.85536"	"-1.41"	"-0.00096"	"14/56"	"14"	"56"	"6055591.07684326"	"HCD"	"MS2"	"0"	"450.0"	"100.000"	"65.4444"	"21176"	"21176"	"21155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"725.9"	""	"666.3"	""	"697.0"	""	"726.5"	""	"667.2"	"770.5"	""	"294"	"44"	"31.000"	"24.000"	"0.000527615243928157"	"17"	"0.0001889"	"0.0006543"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLIAYLK"	"[R].aDLIAYLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"455.62274"	"1364.85367"	"1364.85536"	"-1.24"	"-0.00056"	"9/56"	"9"	"56"	"1795305.51397705"	"HCD"	"MS2"	"11.71524"	"67.1"	"100.000"	"65.6462"	"21206"	"21206"	"21177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.4"	""	"94.2"	""	"104.6"	""	"108.8"	""	"103.0"	"123.9"	""	"291"	"25"	"31.000"	"24.000"	"0.0466512186715545"	"15"	"0.0003839"	"0.00173"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLIAYLK"	"[R].aDLIAYLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.93048"	"1364.85369"	"1364.85536"	"-1.23"	"-0.00084"	"7/56"	"7"	"56"	"2817048.18884277"	"HCD"	"MS2"	"19.78794"	"178.3"	"100.000"	"65.8107"	"21326"	"21326"	"21299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"259.0"	""	"267.5"	""	"272.2"	""	"280.6"	"0.1"	"303.7"	"304.1"	""	"291"	"10"	"31.000"	"24.000"	"1.51308384128128"	"13"	"0.0003839"	"0.002061"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLIAYLK"	"[R].aDLIAYLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"682.93085"	"1364.85442"	"1364.85536"	"-0.69"	"-0.00047"	"14/56"	"14"	"56"	"4053528.95007324"	"HCD"	"MS2"	"1.958644"	"297.7"	"100.000"	"65.7385"	"21243"	"21243"	"21225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.1"	""	"406.3"	""	"472.6"	""	"445.0"	""	"475.6"	"557.0"	""	"287"	"44"	"31.000"	"24.000"	"0.000517430352736057"	"17"	"0.0001889"	"0.0006715"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSFLEAK"	"[R].lVSFLEAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51111"	"Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1"	"P51111"	"Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"682.93109"	"1364.85491"	"1364.85536"	"-0.33"	"-0.00023"	"12/62"	"12"	"62"	"1724323.15057373"	"HCD"	"MS2"	"0"	"121.3"	"100.000"	"63.2191"	"20215"	"20215"	"20185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.4"	""	"164.4"	""	"175.4"	""	"200.8"	""	"227.1"	"222.3"	""	"291"	"32"	"31.000"	"24.000"	"0.00897145727708456"	"16"	"0.0001889"	"0.0005848"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLIAYLK"	"[R].aDLIAYLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"682.93164"	"1364.85600"	"1364.85536"	"0.47"	"0.00032"	"14/56"	"14"	"56"	"2984389.91650391"	"HCD"	"MS2"	"12.75428"	"233.0"	"100.000"	"65.4364"	"21120"	"21120"	"21097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.1"	""	"335.2"	""	"347.7"	""	"382.4"	""	"371.3"	"404.1"	""	"289"	"44"	"31.000"	"24.000"	"0.000560877278856487"	"18"	"0.0001889"	"0.0003989"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVAFWSELR"	"[K].eVAFWSELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"683.37256"	"1365.73784"	"1365.73642"	"1.04"	"0.00071"	"7/76"	"7"	"76"	"3210642.69006348"	"HCD"	"MS2"	"12.75835"	"171.3"	"100.000"	"57.9441"	"18064"	"18064"	"18043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.9"	"3.0"	"229.7"	""	"258.5"	""	"305.7"	"2.2"	"287.8"	"317.6"	""	"932"	"33"	"36.000"	"29.000"	"0.021596626459711"	"19"	"0.0001859"	"0.000327"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVAFWSELR"	"[K].eVAFWSELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"683.37317"	"1365.73906"	"1365.73642"	"1.94"	"0.00132"	"7/76"	"7"	"76"	"3099506.40179443"	"HCD"	"MS2"	"18.48592"	"166.6"	"100.000"	"58.1544"	"18204"	"18204"	"18181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"210.6"	""	"211.3"	""	"246.6"	""	"294.6"	"4.6"	"288.7"	"321.8"	""	"923"	"32"	"36.000"	"29.000"	"0.0293881132899003"	"18"	"0.0001889"	"0.0003942"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSEFYSK"	"[K].fSEFYSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"683.37476"	"1365.74224"	"1365.74547"	"-2.37"	"-0.00162"	"6/56"	"6"	"56"	"3008318.24829102"	"HCD"	"MS2"	"0"	"240.2"	"100.000"	"46.4471"	"13394"	"13394"	"13368"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.6"	""	"333.8"	""	"363.4"	""	"377.1"	""	"442.2"	"438.6"	""	"933"	"9"	"36.000"	"29.000"	"6.10733367079224"	"20"	"0.001007"	"0.01091"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSEFYSK"	"[K].fSEFYSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.37720"	"1365.74712"	"1365.74547"	"1.20"	"0.00082"	"4/56"	"4"	"56"	"2693363.39099121"	"HCD"	"MS2"	"47.86553"	"207.3"	"100.000"	"46.7460"	"13564"	"13564"	"13538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"276.6"	""	"277.6"	"2.3"	"291.5"	""	"343.5"	"3.0"	"396.9"	"373.8"	""	"916"	"3"	"36.000"	"29.000"	"24.5960562737576"	"13"	"0.002361"	"0.03484"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQPFTILFR"	"[R].dQPFTILFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"683.38971"	"1365.77214"	"1365.77280"	"-0.48"	"-0.00033"	"7/86"	"7"	"86"	"2052440.81414795"	"HCD"	"MS2"	"3.895777"	"114.2"	"100.000"	"65.1289"	"21047"	"21047"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.3"	""	"172.8"	""	"189.7"	""	"154.7"	"0.4"	"168.9"	"186.7"	""	"861"	"32"	"36.000"	"29.000"	"0.0278594896079765"	"20"	"0.0001308"	"0.0002424"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQPFTILFR"	"[R].dQPFTILFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"683.38989"	"1365.77251"	"1365.77280"	"-0.22"	"-0.00015"	"7/86"	"7"	"86"	"8241053.5637207"	"HCD"	"MS2"	"4.554289"	"354.7"	"100.000"	"64.8104"	"20917"	"20917"	"20899"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"703.5"	""	"561.6"	""	"597.6"	""	"497.6"	"1.2"	"473.7"	"508.2"	""	"876"	"41"	"36.000"	"29.000"	"0.00348717795482786"	"20"	"0.0001308"	"0.0002959"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQPFTILFR"	"[R].dQPFTILFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"Q9WVH8"	"Fibulin-5 OS=Rattus norvegicus OX=10116 GN=Fbln5 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"683.39056"	"1365.77385"	"1365.77280"	"0.77"	"0.00052"	"7/86"	"7"	"86"	"7652752.84912109"	"HCD"	"MS2"	"14.44018"	"351.4"	"100.000"	"64.7979"	"20859"	"20859"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"709.2"	""	"537.3"	""	"593.8"	""	"473.5"	"1.6"	"487.6"	"510.7"	""	"873"	"42"	"36.000"	"29.000"	"0.0024945042490727"	"21"	"0.0001889"	"0.0004487"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLQAFFQVR"	"[K].aGLQAFFQVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"683.39471"	"1365.78215"	"1365.78404"	"-1.38"	"-0.00094"	"8/86"	"8"	"86"	"6390334.67492676"	"HCD"	"MS2"	"4.447268"	"331.5"	"100.000"	"60.1862"	"19029"	"19029"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"478.6"	""	"585.7"	""	"425.4"	""	"564.0"	"11.6"	"519.2"	"550.7"	""	"854"	"44"	"36.000"	"29.000"	"0.00156468844374625"	"23"	"0"	"0.0001374"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLQAFFQVR"	"[K].aGLQAFFQVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"683.39594"	"1365.78459"	"1365.78404"	"0.41"	"0.00028"	"6/86"	"6"	"86"	"5650207.26135254"	"HCD"	"MS2"	"13.6621"	"296.3"	"100.000"	"60.0234"	"18909"	"18909"	"18889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"429.6"	""	"532.8"	""	"377.3"	""	"499.8"	"7.3"	"485.4"	"470.2"	""	"850"	"39"	"36.000"	"29.000"	"0.00542486493744822"	"20"	"0"	"9.988E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITFTVLASR"	"[K].eITFTVLASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"683.39905"	"1365.79082"	"1365.79393"	"-2.28"	"-0.00156"	"8/88"	"8"	"88"	"3750799.89038086"	"HCD"	"MS2"	"0"	"193.6"	"86.964"	"53.0158"	"16071"	"16071"	"16050"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.1"	""	"267.3"	""	"233.2"	""	"351.8"	""	"401.1"	"385.0"	""	"767"	"31"	"35.000"	"28.000"	"0.0297690769227103"	"21"	"0"	"0.0001067"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITFTVLASR"	"[K].eITFTVLASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.39990"	"1365.79253"	"1365.79393"	"-1.03"	"-0.00070"	"7/88"	"7"	"88"	"2773107.01269531"	"HCD"	"MS2"	"0"	"162.1"	"100.000"	"53.2486"	"16216"	"16216"	"16198"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"206.1"	""	"231.3"	""	"211.7"	""	"280.5"	"0.6"	"314.5"	"292.2"	""	"755"	"9"	"35.000"	"28.000"	"5.04564807496282"	"13"	"0.0001889"	"0.0004744"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9194"	"0.0000"	"1"	"1"	"1"	"455.93927"	"1365.80326"	"1365.80517"	"-1.40"	"-0.00064"	"13/78"	"13"	"78"	"17804931.5320435"	"HCD"	"MS2"	"22.12382"	"217.3"	"100.000"	"34.8799"	"8676"	"8676"	"8654"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.7"	""	"320.3"	""	"325.4"	""	"319.7"	""	"406.8"	"377.1"	""	"741"	"62"	"35.000"	"28.000"	"2.08827751483516E-05"	"21"	"0"	"3.567E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"455.93945"	"1365.80381"	"1365.80517"	"-1.00"	"-0.00045"	"9/78"	"9"	"78"	"3566595.23895264"	"HCD"	"MS2"	"21.716"	"156.6"	"100.000"	"35.2055"	"8810"	"8810"	"8779"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"225.9"	""	"208.3"	""	"240.2"	""	"228.1"	"4.0"	"304.1"	"272.9"	""	"727"	"24"	"35.000"	"28.000"	"0.154705023174116"	"22"	"0.0001889"	"0.0004025"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"455.93948"	"1365.80390"	"1365.80517"	"-0.93"	"-0.00042"	"11/78"	"11"	"78"	"3521175.67138672"	"HCD"	"MS2"	"30.97458"	"148.7"	"100.000"	"35.2536"	"8873"	"8873"	"8842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.5"	""	"225.0"	""	"221.2"	""	"230.4"	"2.9"	"285.5"	"238.3"	""	"727"	"41"	"35.000"	"28.000"	"0.00323969716011616"	"22"	"0"	"0.0001777"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"455.93948"	"1365.80390"	"1365.80517"	"-0.93"	"-0.00042"	"13/78"	"13"	"78"	"17544394.1619263"	"HCD"	"MS2"	"30.75817"	"167.8"	"71.632"	"34.9190"	"8735"	"8735"	"8714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.1"	""	"262.8"	""	"240.7"	""	"264.6"	""	"301.1"	"301.4"	""	"727"	"53"	"35.000"	"28.000"	"0.00020114276469992"	"19"	"0"	"8.476E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.40576"	"1365.80425"	"1365.80517"	"-0.67"	"-0.00046"	"8/78"	"8"	"78"	"1223071.81085205"	"HCD"	"MS2"	"22.65705"	"101.3"	"100.000"	"35.0588"	"8793"	"8793"	"8762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.8"	""	"134.2"	""	"146.0"	""	"159.7"	"1.0"	"181.8"	"189.1"	""	"727"	"46"	"35.000"	"28.000"	"0.000828904343172151"	"15"	"0.0001308"	"0.000221"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"683.40869"	"1365.81011"	"1365.80517"	"3.62"	"0.00247"	"8/78"	"8"	"78"	"1561485.94580078"	"HCD"	"MS2"	"0"	"115.9"	"100.000"	"35.0199"	"8777"	"8777"	"8746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.8"	""	"151.0"	""	"162.4"	""	"178.0"	""	"216.8"	"207.9"	""	"622"	"51"	"34.000"	"27.000"	"0.000235375030351523"	"19"	"7.476E-05"	"0.0001892"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYAEAVAR"	"[K].kYAEAVAR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"455.94589"	"1365.82312"	"1365.82546"	"-1.71"	"-0.00078"	"4/70"	"4"	"70"	"4016449.02178955"	"HCD"	"MS2"	"36.06865"	"348.4"	"100.000"	"26.3768"	"5293"	"5293"	"5270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"547.0"	""	"501.0"	""	"520.8"	""	"509.0"	""	"597.0"	"625.4"	""	"482"	"2"	"33.000"	"26.000"	"14.4549649377578"	"13"	"0.0002277"	"0.001309"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYAEAVAR"	"[K].kYAEAVAR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"455.94623"	"1365.82413"	"1365.82546"	"-0.97"	"-0.00044"	"4/70"	"4"	"70"	"3885521.1362915"	"HCD"	"MS2"	"43.83068"	"342.5"	"100.000"	"26.2726"	"5214"	"5214"	"5192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"532.3"	""	"470.2"	""	"496.9"	""	"481.1"	""	"629.9"	"638.2"	""	"519"	"3"	"34.000"	"27.000"	"13.0357901981059"	"13"	"0.0001889"	"0.001086"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSQIFLAK"	"[K].tSQIFLAk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"683.42749"	"1365.84770"	"1365.85061"	"-2.13"	"-0.00145"	"7/68"	"7"	"68"	"2760795.81445313"	"HCD"	"MS2"	"0"	"256.5"	"100.000"	"42.7698"	"11906"	"11906"	"11884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.7"	""	"303.1"	""	"350.5"	""	"443.6"	"0.0"	"490.6"	"529.5"	""	"398"	"39"	"32.000"	"25.000"	"0.00256361660786934"	"22"	"0.0001889"	"0.0006358"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSQIFLAK"	"[K].tSQIFLAk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"683.42773"	"1365.84819"	"1365.85061"	"-1.77"	"-0.00121"	"7/68"	"7"	"68"	"4131456.05126953"	"HCD"	"MS2"	"15.84679"	"332.0"	"100.000"	"42.9986"	"12044"	"12044"	"12019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"414.7"	""	"436.5"	""	"454.0"	""	"520.1"	"2.6"	"630.6"	"691.2"	""	"390"	"40"	"32.000"	"25.000"	"0.00213813248247921"	"22"	"0.0001889"	"0.0006942"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"455.95462"	"1365.84931"	"1365.85061"	"-0.95"	"-0.00043"	"6/70"	"6"	"70"	"7549924.78015137"	"HCD"	"MS2"	"3.559616"	"282.9"	"100.000"	"48.5989"	"14274"	"14274"	"14255"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.2"	""	"363.9"	""	"398.7"	""	"474.9"	""	"500.1"	"571.5"	""	"382"	"35"	"32.000"	"25.000"	"0.0057814046476735"	"20"	"0.0001889"	"0.0005835"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"455.95468"	"1365.84949"	"1365.85061"	"-0.82"	"-0.00037"	"6/70"	"6"	"70"	"6998769.51538086"	"HCD"	"MS2"	"0"	"285.6"	"100.000"	"47.9723"	"14018"	"14018"	"13992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"369.4"	""	"395.9"	""	"387.7"	""	"538.8"	""	"497.1"	"525.0"	""	"382"	"37"	"32.000"	"25.000"	"0.00392675103832972"	"25"	"0.0001889"	"0.00058"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQSLAVK"	"[K].vYQSLAVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"683.42841"	"1365.84953"	"1365.85061"	"-0.79"	"-0.00054"	"7/66"	"7"	"66"	"3001945.76464844"	"HCD"	"MS2"	"37.66241"	"276.4"	"100.000"	"40.3068"	"10900"	"10900"	"10869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.7"	""	"320.9"	""	"316.8"	""	"481.0"	"1.0"	"606.7"	"572.0"	""	"382"	"37"	"32.000"	"25.000"	"0.00423675516181842"	"25"	"0.0001889"	"0.001103"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"455.95480"	"1365.84986"	"1365.85061"	"-0.55"	"-0.00025"	"6/70"	"6"	"70"	"12950630.8943481"	"HCD"	"MS2"	"6.727888"	"476.2"	"100.000"	"48.2816"	"14192"	"14192"	"14175"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"651.2"	""	"639.9"	""	"675.1"	""	"847.3"	""	"816.8"	"885.5"	""	"383"	"34"	"32.000"	"25.000"	"0.00830173332112117"	"20"	"0.0001889"	"0.000549"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"455.95486"	"1365.85004"	"1365.85061"	"-0.42"	"-0.00019"	"6/70"	"6"	"70"	"37294512.3955078"	"HCD"	"MS2"	"3.962837"	"536.2"	"38.595"	"48.6005"	"14322"	"14322"	"14303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"696.2"	""	"687.4"	""	"772.6"	""	"921.0"	""	"958.1"	"1054.1"	""	"382"	"35"	"32.000"	"25.000"	"0.00580809039904169"	"20"	"0.0002277"	"0.00113"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"455.95502"	"1365.85050"	"1365.85061"	"-0.08"	"-0.00004"	"6/70"	"6"	"70"	"36611680.9206543"	"HCD"	"MS2"	"3.536669"	"413.5"	"31.922"	"48.2889"	"14147"	"14147"	"14128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"562.4"	""	"500.8"	""	"601.8"	""	"717.8"	""	"739.4"	"798.8"	""	"382"	"39"	"32.000"	"25.000"	"0.0026732117861137"	"21"	"0.0001889"	"0.0008181"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"683.42908"	"1365.85088"	"1365.85061"	"0.20"	"0.00013"	"7/70"	"7"	"70"	"3682593.15979004"	"HCD"	"MS2"	"0"	"289.2"	"100.000"	"48.8334"	"14370"	"14370"	"14351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.8"	""	"377.6"	""	"416.1"	""	"475.7"	""	"524.8"	"570.9"	""	"388"	"41"	"32.000"	"25.000"	"0.00167803776242484"	"24"	"0.0001889"	"0.000634"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"455.95529"	"1365.85132"	"1365.85061"	"0.52"	"0.00024"	"6/70"	"6"	"70"	"5956320.58349609"	"HCD"	"MS2"	"2.798377"	"223.4"	"100.000"	"48.9201"	"14453"	"14453"	"14431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.6"	""	"275.0"	""	"320.4"	""	"395.8"	""	"399.5"	"445.4"	""	"382"	"40"	"32.000"	"25.000"	"0.00174194070316979"	"22"	"0.0001889"	"0.0004305"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"683.42963"	"1365.85198"	"1365.85061"	"1.00"	"0.00068"	"7/70"	"7"	"70"	"135767164.902344"	"HCD"	"MS2"	"0.2503374"	"641.0"	"6.633"	"48.2040"	"14113"	"14113"	"14096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"876.4"	""	"807.3"	""	"922.8"	""	"1082.3"	"1.3"	"1134.0"	"1249.0"	""	"382"	"44"	"32.000"	"25.000"	"0.000746506110963489"	""	"0.00103"	"0.01176"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"683.42969"	"1365.85210"	"1365.85061"	"1.09"	"0.00075"	"7/70"	"7"	"70"	"19200801.1503296"	"HCD"	"MS2"	"0"	"1280.7"	"100.000"	"48.2405"	"14176"	"14176"	"14159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1853.8"	""	"1693.0"	""	"1830.2"	""	"2284.6"	""	"2177.4"	"2283.6"	""	"382"	"41"	"32.000"	"25.000"	"0.00152066435929708"	"24"	"0.0003839"	"0.001595"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"683.42975"	"1365.85222"	"1365.85061"	"1.18"	"0.00081"	"7/70"	"7"	"70"	"10026330.5783081"	"HCD"	"MS2"	"0"	"712.5"	"100.000"	"47.9173"	"13995"	"13995"	"13976"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1018.9"	""	"943.0"	""	"1013.0"	""	"1287.1"	""	"1214.9"	"1271.4"	""	"382"	"41"	"32.000"	"25.000"	"0.00158136953269056"	"25"	"0.0003839"	"0.001583"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"683.42981"	"1365.85234"	"1365.85061"	"1.27"	"0.00087"	"7/70"	"7"	"70"	"2040307.79064941"	"HCD"	"MS2"	"9.931"	"181.2"	"100.000"	"49.3595"	"14633"	"14633"	"14606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.4"	""	"252.6"	""	"255.4"	""	"287.4"	""	"340.5"	"351.5"	""	"382"	"41"	"32.000"	"25.000"	"0.00168668260979946"	"20"	"0.0001859"	"0.0003662"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"683.42981"	"1365.85234"	"1365.85061"	"1.27"	"0.00087"	"7/70"	"7"	"70"	"2930886.6317749"	"HCD"	"MS2"	"55.45742"	"274.8"	"100.000"	"46.1565"	"13323"	"13323"	"13296"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"405.7"	""	"354.4"	""	"370.9"	""	"435.7"	""	"520.1"	"518.9"	""	"382"	"17"	"32.000"	"25.000"	"0.358123951040877"	"16"	"0.0003839"	"0.001605"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"683.43018"	"1365.85307"	"1365.85061"	"1.81"	"0.00123"	"7/70"	"7"	"70"	"35125699.3815918"	"HCD"	"MS2"	"0.4444493"	"443.3"	"18.936"	"48.8670"	"14432"	"14432"	"14415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"581.1"	"2.6"	"549.1"	""	"647.1"	""	"718.7"	"3.3"	"817.2"	"883.1"	""	"333"	"44"	"32.000"	"25.000"	"0.000641821465513509"	""	"0.0006037"	"0.004484"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"683.43109"	"1365.85491"	"1365.85061"	"3.15"	"0.00215"	"7/70"	"7"	"70"	"3723016.80688477"	"HCD"	"MS2"	"51.85938"	"323.2"	"100.000"	"45.8395"	"13145"	"13145"	"13118"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.4"	""	"403.4"	""	"425.7"	""	"486.3"	""	"621.8"	"655.7"	""	"332"	"26"	"32.000"	"25.000"	"0.037853678395207"	"18"	"0.0004166"	"0.002121"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"683.43134"	"1365.85539"	"1365.85061"	"3.50"	"0.00239"	"7/70"	"7"	"70"	"71839833.9301758"	"HCD"	"MS2"	"0"	"629.0"	"12.952"	"48.5142"	"14240"	"14240"	"14224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"810.0"	""	"789.7"	""	"910.0"	""	"1031.5"	""	"1156.4"	"1267.8"	""	"325"	"42"	"32.000"	"25.000"	"0.000924386012621242"	""	"0.001007"	"0.01085"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"683.43170"	"1365.85613"	"1365.85061"	"4.04"	"0.00276"	"7/70"	"7"	"70"	"144399476.671875"	"HCD"	"MS2"	"0.09029949"	"879.6"	"9.442"	"48.5591"	"14305"	"14305"	"14287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1217.4"	""	"1116.0"	""	"1222.6"	""	"1513.3"	"7.9"	"1573.1"	"1683.7"	""	"309"	"41"	"31.000"	"24.000"	"0.00122441455559233"	""	"0.001966"	"0.02792"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFLSHPAYR"	"[K].fFLSHPAYR.[H]"	"N-Term(TMT6plex)"	"2"	"2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"456.25299"	"1366.74442"	"1366.74692"	"-1.83"	"-0.00083"	"6/64"	"6"	"64"	"13122575.5036011"	"HCD"	"MS2"	"43.28245"	"230.6"	"79.485"	"38.1886"	"10034"	"10034"	"10007"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"300.7"	""	"326.2"	""	"349.3"	""	"344.3"	"1.3"	"441.5"	"422.6"	""	"925"	"36"	"36.000"	"29.000"	"0.0110182275457839"	"29"	"0.0001308"	"0.0002895"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFLSHPAYR"	"[K].fFLSHPAYR.[H]"	"N-Term(TMT6plex)"	"2"	"2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"456.25354"	"1366.74607"	"1366.74692"	"-0.63"	"-0.00029"	"8/64"	"8"	"64"	"12876131.3845215"	"HCD"	"MS2"	"33.50202"	"265.0"	"92.485"	"38.3067"	"10126"	"10126"	"10097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.7"	""	"367.5"	""	"413.2"	""	"377.5"	"2.2"	"485.7"	"509.4"	""	"949"	"35"	"36.000"	"29.000"	"0.015967473966867"	"29"	"0.0001889"	"0.0005747"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEFSGANK"	"[K].vGEFSGANk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"683.88971"	"1366.77214"	"1366.77309"	"-0.69"	"-0.00047"	"8/70"	"8"	"70"	"3106251.11785889"	"HCD"	"MS2"	"0"	"252.7"	"100.000"	"34.2467"	"8417"	"8417"	"8389"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"384.6"	""	"328.3"	""	"357.9"	""	"456.8"	"1.7"	"430.5"	"431.5"	""	"898"	"34"	"36.000"	"29.000"	"0.0174279514329801"	"25"	"0.0001308"	"0.0002159"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEFSGANK"	"[K].vGEFSGANk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"683.89038"	"1366.77349"	"1366.77309"	"0.29"	"0.00020"	"7/70"	"7"	"70"	"1333182.93731689"	"HCD"	"MS2"	"46.66629"	"108.6"	"100.000"	"34.6206"	"8613"	"8613"	"8586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.9"	""	"129.7"	""	"156.8"	""	"176.7"	""	"194.4"	"205.0"	""	"909"	"16"	"36.000"	"29.000"	"1.05083344713481"	"15"	"0.0001859"	"0.0003267"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEFSGANK"	"[K].vGEFSGANk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"683.89117"	"1366.77507"	"1366.77309"	"1.45"	"0.00099"	"8/70"	"8"	"70"	"3222636.52026367"	"HCD"	"MS2"	"0"	"257.5"	"100.000"	"34.3017"	"8482"	"8482"	"8461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"392.6"	""	"351.6"	""	"355.7"	""	"453.1"	"2.1"	"433.2"	"448.2"	""	"885"	"42"	"36.000"	"29.000"	"0.00267247268499048"	"25"	"0"	"0.0001637"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYQNWVK"	"[R].aYQNWVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"683.89691"	"1366.78655"	"1366.78834"	"-1.31"	"-0.00090"	"5/58"	"5"	"58"	"2176611.55615234"	"HCD"	"MS2"	"0"	"205.3"	"100.000"	"39.5879"	"10652"	"10652"	"10622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"247.9"	""	"241.7"	""	"228.4"	""	"332.2"	""	"432.2"	"469.5"	""	"813"	"28"	"36.000"	"29.000"	"0.0704791325087056"	"27"	"0.0005564"	"0.0036"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDELFSGK"	"[K].iDELFSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62745"	"CD81 antigen OS=Rattus norvegicus OX=10116 GN=Cd81 PE=1 SV=1"	"Q62745"	"CD81 antigen OS=Rattus norvegicus OX=10116 GN=Cd81 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"683.90192"	"1366.79656"	"1366.79824"	"-1.23"	"-0.00084"	"12/64"	"12"	"64"	"3755847.50848389"	"HCD"	"MS2"	"8.592191"	"288.1"	"100.000"	"58.5795"	"18378"	"18378"	"18357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.5"	""	"288.6"	""	"318.8"	""	"509.7"	""	"667.1"	"697.0"	""	"717"	"30"	"35.000"	"28.000"	"0.0389483586066718"	"26"	"0.0001889"	"0.0007641"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDELFSGK"	"[K].iDELFSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62745"	"CD81 antigen OS=Rattus norvegicus OX=10116 GN=Cd81 PE=1 SV=1"	"Q62745"	"CD81 antigen OS=Rattus norvegicus OX=10116 GN=Cd81 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"683.90216"	"1366.79704"	"1366.79824"	"-0.87"	"-0.00060"	"12/64"	"12"	"64"	"3852915.69488525"	"HCD"	"MS2"	"0"	"237.5"	"100.000"	"58.4382"	"18267"	"18267"	"18250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.6"	""	"265.9"	""	"286.9"	""	"410.8"	"0.3"	"521.6"	"540.5"	""	"717"	"30"	"35.000"	"28.000"	"0.0390381438460036"	"26"	"0.0001889"	"0.0008117"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLWGYK"	"[K].eLLWGYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"683.90912"	"1366.81096"	"1366.81349"	"-1.85"	"-0.00127"	"6/48"	"6"	"48"	"3451987.25250244"	"HCD"	"MS2"	"28.24596"	"271.0"	"100.000"	"56.1204"	"17373"	"17373"	"17349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"383.2"	""	"354.2"	""	"345.1"	""	"451.4"	"2.7"	"517.3"	"515.1"	""	"626"	"26"	"34.000"	"27.000"	"0.0756039241181266"	""	"0.0006037"	"0.003972"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSELWK"	"[K].fVSELWk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"683.90967"	"1366.81206"	"1366.81349"	"-1.05"	"-0.00072"	"12/50"	"12"	"50"	"13161700.3945313"	"HCD"	"MS2"	"34.04726"	"573.8"	"59.574"	"60.3780"	"19108"	"19108"	"19091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"627.7"	""	"871.7"	""	"836.1"	""	"1040.2"	"1.1"	"1041.0"	"1019.0"	""	"602"	"29"	"34.000"	"27.000"	"0.0353644164036798"	"22"	"0.001058"	"0.01324"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLWGYK"	"[K].eLLWGYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"683.91010"	"1366.81291"	"1366.81349"	"-0.42"	"-0.00029"	"6/48"	"6"	"48"	"6784255.60168457"	"HCD"	"MS2"	"6.704887"	"467.2"	"92.035"	"56.4193"	"17495"	"17495"	"17477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"556.2"	""	"574.3"	""	"545.3"	""	"800.8"	""	"932.4"	"1029.6"	""	"598"	"28"	"34.000"	"27.000"	"0.0513654607760119"	""	"0.000523"	"0.003264"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSELWK"	"[K].fVSELWk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"683.91016"	"1366.81304"	"1366.81349"	"-0.34"	"-0.00023"	"12/50"	"12"	"50"	"12657179.333374"	"HCD"	"MS2"	"30.31762"	"463.0"	"48.089"	"60.2492"	"19002"	"19002"	"18985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"518.0"	""	"661.9"	""	"690.3"	""	"853.4"	"0.3"	"829.8"	"833.5"	""	"598"	"31"	"34.000"	"27.000"	"0.0226814694933726"	"24"	"0.0006037"	"0.00595"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLWGYK"	"[K].eLLWGYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"683.91028"	"1366.81328"	"1366.81349"	"-0.16"	"-0.00011"	"10/48"	"10"	"48"	"5720723.34716797"	"HCD"	"MS2"	"16.52471"	"434.6"	"100.000"	"55.9810"	"17262"	"17262"	"17243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"565.1"	""	"555.5"	""	"492.6"	""	"809.6"	"5.8"	"820.5"	"873.6"	""	"598"	"22"	"34.000"	"27.000"	"0.18099692155142"	"25"	"0.0006037"	"0.003881"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLWGYK"	"[K].eLLWGYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"683.91052"	"1366.81377"	"1366.81349"	"0.20"	"0.00014"	"10/48"	"10"	"48"	"3692013.1362915"	"HCD"	"MS2"	"22.20876"	"288.5"	"100.000"	"56.2946"	"17390"	"17390"	"17371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"330.3"	""	"368.2"	""	"361.3"	""	"479.6"	""	"589.2"	"613.0"	""	"602"	"20"	"34.000"	"27.000"	"0.277055321097704"	"23"	"0.0005564"	"0.003606"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"683.92035"	"1366.83342"	"1366.83462"	"-0.88"	"-0.00060"	"7/70"	"7"	"70"	"3960665.89239502"	"HCD"	"MS2"	"13.64005"	"292.8"	"100.000"	"51.4955"	"15449"	"15449"	"15426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"507.4"	""	"504.8"	""	"550.2"	""	"363.1"	""	"407.8"	"428.1"	""	"452"	"39"	"33.000"	"26.000"	"0.00261883682491059"	""	"0.0001889"	"0.0005421"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"683.92059"	"1366.83391"	"1366.83462"	"-0.52"	"-0.00036"	"7/70"	"7"	"70"	"4221353.94177246"	"HCD"	"MS2"	"14.03807"	"303.1"	"100.000"	"51.6607"	"15567"	"15567"	"15542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"513.0"	""	"515.4"	""	"568.4"	""	"386.5"	""	"446.2"	"431.2"	""	"445"	"41"	"33.000"	"26.000"	"0.00179609794230367"	""	"0.0001889"	"0.0005156"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLSVAYK"	"[R].nLLSVAYk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"683.92126"	"1366.83525"	"1366.83462"	"0.46"	"0.00031"	"7/70"	"7"	"70"	"5260608.05786133"	"HCD"	"MS2"	"9.766672"	"378.0"	"100.000"	"55.3404"	"17054"	"17054"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"512.8"	""	"448.3"	""	"494.6"	""	"662.1"	"8.4"	"720.3"	"738.4"	""	"434"	"40"	"33.000"	"26.000"	"0.0020963304074079"	"24"	"0.0001889"	"0.0007781"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPPGNVK"	"[K].sPLPPGNVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.92474"	"1366.84221"	"1366.84586"	"-2.67"	"-0.00182"	"8/68"	"8"	"68"	"974944.47668457"	"HCD"	"MS2"	"58.20249"	"79.4"	"100.000"	"34.7055"	"8648"	"8648"	"8618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.1"	""	"104.3"	""	"105.7"	""	"124.2"	"0.2"	"145.5"	"142.1"	""	"369"	"23"	"32.000"	"25.000"	"0.0935397856766829"	"14"	"0.0002277"	"0.001323"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTRPLFK"	"[K].fTRPLFk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"456.29132"	"1366.85941"	"1366.86111"	"-1.25"	"-0.00057"	"6/56"	"6"	"56"	"18518620.5542603"	"HCD"	"MS2"	"7.483333"	"1171.1"	"100.000"	"38.9239"	"10336"	"10336"	"10310"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2328.8"	""	"2021.1"	""	"1889.6"	""	"1657.0"	""	"1461.0"	"1688.8"	""	"248"	"10"	"30.000"	"23.000"	"1.18146724338933"	"13"	"0.003698"	"0.08524"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTRPLFK"	"[K].fTRPLFk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"456.29166"	"1366.86042"	"1366.86111"	"-0.51"	"-0.00023"	"6/56"	"6"	"56"	"19942526.0227661"	"HCD"	"MS2"	"6.500221"	"1234.0"	"100.000"	"39.0239"	"10420"	"10420"	"10398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2415.9"	""	"2133.7"	""	"1989.3"	""	"1760.3"	""	"1573.2"	"1761.2"	""	"252"	"10"	"31.000"	"24.000"	"1.18951670412026"	"13"	"0.003107"	"0.06107"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLADIAAFFR"	"[K].dLADIAAFFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"F1M0Z1"	"Triple functional domain protein OS=Rattus norvegicus OX=10116 GN=Trio PE=1 SV=4"	"F1M0Z1"	"Triple functional domain protein OS=Rattus norvegicus OX=10116 GN=Trio PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.37866"	"1367.75005"	"1367.75207"	"-1.48"	"-0.00101"	"5/78"	"5"	"78"	"233479.606140137"	"HCD"	"MS2"	"35.71978"	"15.3"	"100.000"	"83.3359"	"28457"	"28457"	"28429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.3"	""	"15.5"	""	"17.9"	""	"32.2"	""	"28.9"	"30.4"	""	"817"	"5"	"36.000"	"29.000"	"11.7812686902722"	"13"	"0.003137"	"0.06375"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"456.58871"	"1367.75159"	"1367.75460"	"-2.20"	"-0.00100"	"4/54"	"4"	"54"	"11839849.3527832"	"HCD"	"MS2"	"22.39145"	"295.7"	"85.125"	"41.9438"	"11569"	"11569"	"11557"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"318.2"	""	"364.6"	""	"439.3"	""	"725.7"	""	"481.4"	"472.5"	""	"794"	"11"	"35.000"	"28.000"	"3.4339226375395"	"20"	"0.0006037"	"0.005156"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"684.37946"	"1367.75163"	"1367.75460"	"-2.17"	"-0.00148"	"6/54"	"6"	"54"	"7485309.27770996"	"HCD"	"MS2"	"0"	"484.4"	"100.000"	"42.1045"	"11680"	"11680"	"11663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"594.4"	""	"587.2"	""	"714.9"	""	"1191.5"	"3.9"	"737.4"	"751.2"	""	"794"	"27"	"35.000"	"28.000"	"0.0831362644972805"	"17"	"0.002772"	"0.04447"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"456.58899"	"1367.75241"	"1367.75460"	"-1.60"	"-0.00073"	"4/54"	"4"	"54"	"13656922.8864746"	"HCD"	"MS2"	"0"	"395.3"	"100.000"	"42.2007"	"11718"	"11718"	"11701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"460.2"	""	"483.9"	""	"574.1"	""	"985.5"	""	"603.0"	"634.4"	""	"826"	"11"	"36.000"	"29.000"	"3.56410140227758"	"20"	"0.0006396"	"0.006244"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"684.38037"	"1367.75347"	"1367.75460"	"-0.83"	"-0.00057"	"6/54"	"6"	"54"	"2867036.93341064"	"HCD"	"MS2"	"0"	"236.4"	"100.000"	"42.2327"	"11686"	"11686"	"11660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.8"	""	"334.3"	""	"340.7"	""	"436.6"	"0.6"	"402.9"	"397.5"	""	"795"	"27"	"35.000"	"29.000"	"0.0769727730668777"	"19"	"0.0007076"	"0.007007"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"684.38037"	"1367.75347"	"1367.75460"	"-0.83"	"-0.00057"	"6/54"	"6"	"54"	"4146112.23974609"	"HCD"	"MS2"	"0"	"313.3"	"100.000"	"42.4026"	"11799"	"11799"	"11779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"420.1"	""	"409.7"	""	"453.7"	""	"647.7"	""	"499.6"	"535.3"	""	"795"	"28"	"35.000"	"29.000"	"0.0652134434846817"	"20"	"0.00103"	"0.01235"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAFWNPK"	"[K].mAFWNPk.[-]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"684.38123"	"1367.75517"	"1367.75460"	"0.42"	"0.00029"	"6/54"	"6"	"54"	"8089143.45812988"	"HCD"	"MS2"	"0"	"540.9"	"100.000"	"41.8980"	"11551"	"11551"	"11528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"653.0"	""	"694.0"	""	"810.5"	""	"1287.9"	"0.1"	"822.7"	"847.0"	""	"762"	"27"	"35.000"	"28.000"	"0.0818323410643734"	"17"	"0.002651"	"0.03922"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RWGYTVK"	"[R].rWGYTVk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"456.61108"	"1367.81870"	"1367.81998"	"-0.93"	"-0.00043"	"6/60"	"6"	"60"	"4905560.24865723"	"HCD"	"MS2"	"43.0287"	"308.4"	"100.000"	"32.6895"	"7790"	"7790"	"7768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"512.7"	""	"455.7"	""	"568.9"	""	"432.8"	"10.2"	"426.6"	"504.1"	""	"565"	"10"	"34.000"	"27.000"	"2.72909373314623"	"15"	"0.002829"	"0.04791"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAGYTGIK"	"[K].vTAGYTGIk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"684.41852"	"1367.82976"	"1367.82987"	"-0.08"	"-0.00006"	"13/72"	"13"	"72"	"2459779.07580566"	"HCD"	"MS2"	"0"	"209.2"	"100.000"	"37.0370"	"9605"	"9605"	"9574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.7"	""	"271.6"	""	"281.1"	""	"341.3"	""	"398.2"	"428.8"	""	"464"	"43"	"33.000"	"26.000"	"0.00118437159994294"	"22"	"0.0001308"	"0.0002304"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLFQISK"	"[K].sSLFQISk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"684.41937"	"1367.83147"	"1367.82987"	"1.17"	"0.00080"	"7/74"	"7"	"74"	"2743539.46966553"	"HCD"	"MS2"	"46.38885"	"242.3"	"100.000"	"48.0434"	"14095"	"14095"	"14066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.6"	""	"264.5"	""	"304.6"	""	"416.1"	""	"555.1"	"524.6"	""	"471"	"41"	"33.000"	"26.000"	"0.00182806195966057"	""	"0.0001889"	"0.0006205"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLFQISK"	"[K].sSLFQISk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"684.42139"	"1367.83550"	"1367.82987"	"4.11"	"0.00281"	"7/74"	"7"	"74"	"1634760.22949219"	"HCD"	"MS2"	"22.6508"	"162.2"	"100.000"	"47.8623"	"13973"	"13973"	"13944"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"242.0"	""	"172.7"	""	"189.2"	""	"255.7"	"0.9"	"371.0"	"309.0"	""	"409"	"7"	"33.000"	"26.000"	"4.21398817263715"	"16"	"0.001058"	"0.01412"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAGLPDLK"	"[R].vPAGLPDLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"684.43549"	"1367.86370"	"1367.86626"	"-1.87"	"-0.00128"	"8/64"	"8"	"64"	"3141957.99560547"	"HCD"	"MS2"	"0"	"198.3"	"100.000"	"50.3171"	"15019"	"15019"	"14998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.2"	""	"129.4"	""	"155.0"	""	"459.3"	"7.3"	"494.6"	"484.3"	""	"243"	"30"	"30.000"	"23.000"	"0.0119557349349978"	""	"0.0001889"	"0.001089"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAGLPDLK"	"[R].vPAGLPDLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.43561"	"1367.86394"	"1367.86626"	"-1.70"	"-0.00116"	"7/64"	"7"	"64"	"3162565.49029541"	"HCD"	"MS2"	"100"	"219.7"	"100.000"	"50.0914"	"14878"	"14878"	"14857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.2"	""	"151.9"	""	"154.2"	""	"538.7"	""	"575.6"	"531.0"	""	"243"	"21"	"30.000"	"23.000"	"0.0884252462512242"	"14"	"0.0003571"	"0.001511"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAGLPDLK"	"[R].vPAGLPDLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"456.62628"	"1367.86429"	"1367.86626"	"-1.44"	"-0.00066"	"8/64"	"8"	"64"	"5819359.00689697"	"HCD"	"MS2"	"42.04746"	"186.6"	"100.000"	"50.6263"	"15144"	"15144"	"15119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.2"	""	"85.6"	""	"87.5"	""	"476.3"	""	"544.3"	"504.4"	""	"236"	"28"	"30.000"	"23.000"	"0.0180252794872093"	"21"	"0.0003839"	"0.00168"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAGLPDLK"	"[R].vPAGLPDLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"684.43585"	"1367.86443"	"1367.86626"	"-1.34"	"-0.00092"	"8/64"	"8"	"64"	"10233300.5649414"	"HCD"	"MS2"	"0"	"457.8"	"100.000"	"50.5990"	"15133"	"15133"	"15119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.9"	""	"172.6"	""	"181.6"	""	"1201.8"	"9.8"	"1359.6"	"1305.7"	""	"236"	"32"	"30.000"	"23.000"	"0.00706125682171178"	""	"0.000523"	"0.00311"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAGLPDLK"	"[R].vPAGLPDLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"456.62656"	"1367.86512"	"1367.86626"	"-0.83"	"-0.00038"	"8/64"	"8"	"64"	"5045724.88537598"	"HCD"	"MS2"	"33.41985"	"171.8"	"100.000"	"50.3365"	"14975"	"14975"	"14964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.8"	""	"77.2"	""	"84.2"	""	"445.2"	"1.8"	"500.6"	"455.4"	""	"235"	"27"	"30.000"	"23.000"	"0.025529238851649"	"20"	"0.0003146"	"0.001447"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAGLPDLK"	"[R].vPAGLPDLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"684.43634"	"1367.86540"	"1367.86626"	"-0.62"	"-0.00043"	"8/64"	"8"	"64"	"9839350.03375244"	"HCD"	"MS2"	"2.569021"	"452.8"	"100.000"	"50.4007"	"15001"	"15001"	"14984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.1"	""	"167.3"	""	"182.6"	""	"1209.6"	""	"1312.8"	"1312.1"	""	"237"	"32"	"30.000"	"23.000"	"0.00694573724949124"	""	"0.0001889"	"0.000515"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKPIVTPR"	"[R].vkPIVTPR.[F]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"456.64209"	"1367.91172"	"1367.91388"	"-1.58"	"-0.00072"	"5/68"	"5"	"68"	"117642835.11499"	"HCD"	"MS2"	"12.23567"	"1571.8"	"25.237"	"30.8005"	"7019"	"7019"	"7000"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2608.3"	""	"2328.9"	""	"2394.8"	""	"2426.9"	""	"2538.8"	"2559.4"	""	"55"	"4"	"24.000"	"17.000"	"1.20873944245402"	"13"	"0.00175"	"0.02441"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKPIVTPR"	"[R].vkPIVTPR.[F]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"456.64224"	"1367.91217"	"1367.91388"	"-1.24"	"-0.00057"	"5/68"	"5"	"68"	"89499266.2755127"	"HCD"	"MS2"	"19.45862"	"2265.5"	"42.505"	"30.8761"	"7091"	"7091"	"7072"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3827.3"	""	"3459.6"	""	"3311.8"	""	"3485.8"	""	"3661.9"	"3804.2"	""	"54"	"3"	"24.000"	"17.000"	"1.3688749123417"	"13"	"0.001966"	"0.02967"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKPIVTPR"	"[R].vkPIVTPR.[F]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"456.64230"	"1367.91236"	"1367.91388"	"-1.11"	"-0.00051"	"6/68"	"6"	"68"	"14213202.3186035"	"HCD"	"MS2"	"13.20202"	"362.0"	"45.947"	"31.1174"	"7146"	"7146"	"7126"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"565.9"	""	"511.4"	""	"511.6"	""	"553.8"	"2.2"	"614.6"	"667.0"	""	"48"	"0"	"23.000"	"16.000"	"2.28671079365676"	"13"	"0.001217"	"0.01788"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKPIVTPR"	"[R].vkPIVTPR.[F]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.46045"	"1367.91362"	"1367.91388"	"-0.19"	"-0.00013"	"6/68"	"6"	"68"	"3152756.6986084"	"HCD"	"MS2"	"15.97045"	"150.2"	"100.000"	"30.8280"	"7031"	"7031"	"7000"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.3"	""	"232.7"	""	"229.8"	""	"223.5"	""	"255.8"	"253.4"	""	"48"	"10"	"23.000"	"16.000"	"0.23670707655149"	"13"	"0.005448"	"0.1721"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKPIVTPR"	"[R].vkPIVTPR.[F]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.46063"	"1367.91399"	"1367.91388"	"0.08"	"0.00006"	"6/68"	"6"	"68"	"2299114.85040283"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"31.0065"	"7143"	"7143"	"7120"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.8"	""	"164.3"	""	"163.9"	""	"155.7"	"0.4"	"174.9"	"170.2"	""	"52"	"29"	"24.000"	"17.000"	"0.00355609494654921"	"14"	"0.0008125"	"0.007533"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIPVLQVK"	"[K].lIPVLQVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"684.47253"	"1367.93779"	"1367.93903"	"-0.90"	"-0.00062"	"7/62"	"7"	"62"	"3627234.9888916"	"HCD"	"MS2"	"25.14688"	"193.8"	"100.000"	"62.1624"	"19836"	"19836"	"19811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.7"	""	"232.5"	""	"245.8"	""	"320.4"	""	"375.7"	"413.3"	""	"21"	"30"	"20.000"	"13.000"	"0.00111992592729177"	""	"0.000523"	"0.003222"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIPVLQVK"	"[K].lIPVLQVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"684.47266"	"1367.93804"	"1367.93903"	"-0.73"	"-0.00050"	"6/62"	"6"	"62"	"1624162.94018555"	"HCD"	"MS2"	"23.2792"	"120.2"	"100.000"	"62.4715"	"19962"	"19962"	"19939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.2"	""	"133.4"	""	"146.4"	""	"187.6"	"3.3"	"267.9"	"271.7"	""	"21"	"22"	"20.000"	"13.000"	"0.00645935716345361"	""	"0.0006037"	"0.003768"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIPVLQVK"	"[K].lIPVLQVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"684.47339"	"1367.93950"	"1367.93903"	"0.34"	"0.00024"	"6/62"	"6"	"62"	"3586777.71337891"	"HCD"	"MS2"	"15.0288"	"194.9"	"100.000"	"62.0310"	"19729"	"19729"	"19705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.0"	""	"230.8"	""	"264.3"	""	"302.5"	""	"378.5"	"417.6"	""	"21"	"30"	"20.000"	"13.000"	"0.00107198645789306"	""	"0.0001889"	"0.00109"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSATWFALSR"	"[K].tSATWFALSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"684.87720"	"1368.74712"	"1368.74732"	"-0.14"	"-0.00010"	"9/88"	"9"	"88"	"6655102.28814697"	"HCD"	"MS2"	"32.41818"	"458.0"	"100.000"	"49.6527"	"14702"	"14702"	"14671"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"620.6"	""	"652.4"	""	"684.3"	""	"687.7"	""	"833.8"	"862.7"	""	"736"	"50"	"35.000"	"28.000"	"0.000373979518976416"	""	"7.476E-05"	"0.0002014"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].emPSVFGk.[ED]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"684.88312"	"1368.75896"	"1368.75974"	"-0.57"	"-0.00039"	"9/62"	"9"	"62"	"1457656.69525146"	"HCD"	"MS2"	"0"	"121.5"	"100.000"	"37.4906"	"9791"	"9791"	"9761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.9"	""	"165.9"	""	"176.6"	""	"197.3"	""	"208.6"	"235.7"	""	"784"	"18"	"35.000"	"28.000"	"0.581147089377213"	"16"	"0.003286"	"0.07441"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVYGPMK"	"[R].sEVYGPMk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"684.88452"	"1368.76177"	"1368.75974"	"1.48"	"0.00101"	"6/58"	"6"	"58"	"634786.639465332"	"HCD"	"MS2"	"0"	"68.7"	"100.000"	"35.1734"	"8840"	"8840"	"8810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.5"	""	"97.8"	""	"85.3"	""	"107.0"	"1.0"	"132.6"	"130.9"	""	"769"	"20"	"35.000"	"28.000"	"0.374021307542243"	"16"	"0.000523"	"0.002835"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLMDFIK"	"[R].gSLMDFIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"684.90106"	"1368.79485"	"1368.79613"	"-0.94"	"-0.00064"	"7/62"	"7"	"62"	"3816296.02325439"	"HCD"	"MS2"	"51.89392"	"312.3"	"100.000"	"62.5245"	"19984"	"19984"	"19955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.2"	""	"329.5"	""	"314.0"	""	"519.6"	"1.8"	"756.3"	"776.1"	""	"627"	"42"	"34.000"	"27.000"	"0.00210492945392286"	""	"0.0001889"	"0.0008349"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLMDFIK"	"[R].gSLMDFIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"684.90149"	"1368.79570"	"1368.79613"	"-0.31"	"-0.00021"	"7/62"	"7"	"62"	"3746447.91223145"	"HCD"	"MS2"	"25.04297"	"315.4"	"100.000"	"62.4134"	"19885"	"19885"	"19865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.0"	""	"334.4"	""	"319.1"	""	"494.6"	""	"792.8"	"789.9"	""	"625"	"42"	"34.000"	"27.000"	"0.00199917136088328"	""	"0.0001889"	"0.0004966"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQEFIK"	"[R].vFQEFIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.5217"	"0.0000"	"1"	"1"	"1"	"456.94757"	"1368.82816"	"1368.82914"	"-0.72"	"-0.00033"	"5/56"	"5"	"56"	"5269409.01196289"	"HCD"	"MS2"	"21.11174"	"195.3"	"100.000"	"57.4972"	"17882"	"17882"	"17851"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.8"	""	"282.9"	""	"293.6"	""	"310.2"	""	"340.4"	"367.1"	""	"362"	"23"	"32.000"	"25.000"	"0.0936868365830528"	"25"	"0.0005564"	"0.003652"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQEFIK"	"[R].vFQEFIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"684.91779"	"1368.82829"	"1368.82914"	"-0.62"	"-0.00042"	"6/56"	"6"	"56"	"14175621.2398682"	"HCD"	"MS2"	"6.688839"	"486.5"	"43.714"	"57.7412"	"17981"	"17981"	"17963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"613.7"	""	"680.7"	""	"705.7"	""	"794.6"	""	"870.3"	"947.6"	""	"362"	"27"	"32.000"	"25.000"	"0.0359483180041685"	"22"	"0.001217"	"0.01828"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQEFIK"	"[R].vFQEFIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"456.94769"	"1368.82853"	"1368.82914"	"-0.45"	"-0.00021"	"7/56"	"7"	"56"	"4748947.4276123"	"HCD"	"MS2"	"5.213766"	"185.4"	"100.000"	"57.6894"	"18014"	"18014"	"17989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.4"	""	"263.2"	""	"279.2"	""	"319.8"	""	"309.2"	"355.6"	""	"362"	"19"	"32.000"	"25.000"	"0.225257144730621"	"21"	"0.002711"	"0.04228"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQEFIK"	"[R].vFQEFIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"684.91852"	"1368.82976"	"1368.82914"	"0.45"	"0.00031"	"6/56"	"6"	"56"	"14832673.4069214"	"HCD"	"MS2"	"3.369373"	"1082.3"	"100.000"	"57.4303"	"17854"	"17854"	"17835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1506.8"	""	"1561.0"	""	"1593.6"	""	"1851.2"	"3.4"	"1800.1"	"1926.6"	""	"357"	"43"	"32.000"	"25.000"	"0.000952002788445404"	"22"	"0.0006037"	"0.005713"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQEFIK"	"[R].vFQEFIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"684.91870"	"1368.83013"	"1368.82914"	"0.72"	"0.00049"	"6/56"	"6"	"56"	"15156681.6730957"	"HCD"	"MS2"	"4.210709"	"569.7"	"51.474"	"57.9079"	"18103"	"18103"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"767.3"	""	"821.2"	""	"841.3"	""	"884.0"	""	"997.8"	"1085.5"	""	"365"	"43"	"32.000"	"25.000"	"0.00101219192614819"	"22"	"0.0006037"	"0.00582"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQEFIK"	"[R].vFQEFIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"684.91913"	"1368.83098"	"1368.82914"	"1.34"	"0.00092"	"6/56"	"6"	"56"	"10708903.0946045"	"HCD"	"MS2"	"9.32843"	"790.7"	"100.000"	"57.5999"	"17977"	"17977"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1073.0"	""	"1173.5"	""	"1152.6"	""	"1366.9"	""	"1324.5"	"1396.7"	""	"361"	"43"	"32.000"	"25.000"	"0.000960455407976564"	"22"	"0.0006037"	"0.005481"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLLVDTVGPR"	"[R].lGLLVDTVGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"3"	"3"	"0.8036"	"0.0000"	"1"	"1"	"1"	"456.95132"	"1368.83942"	"1368.84122"	"-1.31"	"-0.00060"	"15/82"	"15"	"82"	"4527091.64233398"	"HCD"	"MS2"	"0"	"41.7"	"100.000"	"59.9309"	"18925"	"18925"	"18900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.9"	""	"61.8"	""	"64.8"	""	"63.1"	"0.1"	"66.4"	"72.7"	""	"316"	"56"	"31.000"	"24.000"	"3.79015601205079E-05"	""	"0.0001308"	"0.0002156"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLLVDTVGPR"	"[R].lGLLVDTVGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"684.92365"	"1368.84001"	"1368.84122"	"-0.88"	"-0.00060"	"10/82"	"10"	"82"	"9468135.86590576"	"HCD"	"MS2"	"2.301004"	"392.8"	"100.000"	"59.9218"	"18921"	"18921"	"18900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"597.8"	""	"647.0"	""	"638.2"	""	"559.8"	"3.3"	"611.4"	"654.9"	""	"310"	"62"	"31.000"	"24.000"	"9.36120375533389E-06"	"19"	"0"	"4.496E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLLVDTVGPR"	"[R].lGLLVDTVGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"684.92444"	"1368.84160"	"1368.84122"	"0.28"	"0.00019"	"10/82"	"10"	"82"	"9509814.95391846"	"HCD"	"MS2"	"0"	"406.3"	"100.000"	"59.7447"	"18795"	"18795"	"18777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"642.4"	""	"663.2"	""	"650.5"	""	"573.1"	"2.4"	"629.6"	"677.9"	""	"290"	"62"	"31.000"	"24.000"	"8.81795751854141E-06"	"19"	"0"	"4.388E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLLVDTVGPR"	"[R].lGLLVDTVGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"456.95215"	"1368.84189"	"1368.84122"	"0.49"	"0.00023"	"8/82"	"8"	"82"	"4303234.68951416"	"HCD"	"MS2"	"2.889639"	"41.1"	"100.000"	"59.7861"	"18812"	"18812"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.7"	"2.4"	"65.5"	""	"64.6"	""	"56.3"	"0.3"	"67.9"	"67.6"	""	"290"	"62"	"31.000"	"24.000"	"8.69697060570488E-06"	""	"0"	"0.0001161"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSWLESYLR"	"[R].sSWLESYLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"685.36804"	"1369.72881"	"1369.73133"	"-1.84"	"-0.00126"	"7/74"	"7"	"74"	"2876076.87701416"	"HCD"	"MS2"	"11.86679"	"177.9"	"100.000"	"58.8271"	"18475"	"18475"	"18453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.7"	""	"222.6"	""	"239.1"	""	"304.5"	""	"357.1"	"358.7"	""	"668"	"22"	"35.000"	"28.000"	"0.20928903080056"	"18"	"0.0001889"	"0.000452"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSWLESYLR"	"[R].sSWLESYLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"685.36859"	"1369.72991"	"1369.73133"	"-1.04"	"-0.00071"	"8/74"	"8"	"74"	"3309763.66442871"	"HCD"	"MS2"	"28.27472"	"193.9"	"100.000"	"58.6841"	"18367"	"18367"	"18345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.4"	""	"241.6"	""	"265.9"	""	"336.0"	"1.2"	"407.7"	"384.0"	""	"654"	"44"	"35.000"	"28.000"	"0.00125183691064601"	"19"	"7.476E-05"	"0.0002032"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDPANGK"	"[R].yFDPANGk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"685.37848"	"1369.74968"	"1369.75162"	"-1.42"	"-0.00097"	"5/60"	"5"	"60"	"1851349.00170898"	"HCD"	"MS2"	"0"	"183.0"	"100.000"	"38.0777"	"10032"	"10032"	"10001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"285.1"	""	"264.0"	""	"291.0"	""	"269.9"	"5.1"	"308.0"	"307.8"	""	"722"	"30"	"35.000"	"28.000"	"0.0405048662003009"	"19"	"0.0001889"	"0.0003801"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFLVNSFLK"	"[-].mFLVNSFLk.[G]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"685.39050"	"1369.77373"	"1369.77511"	"-1.01"	"-0.00069"	"6/72"	"6"	"72"	"199673.355773926"	"HCD"	"MS2"	"15.80301"	"8.2"	"100.000"	"108.1485"	"35784"	"35784"	"35781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.2"	""	"8.8"	""	"14.8"	""	"16.9"	""	"14.4"	"15.3"	""	"685"	"29"	"35.000"	"28.000"	"0.0395057740803724"	"15"	"0.0002277"	"0.001289"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFLVNSFLK"	"[-].mFLVNSFLk.[G]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"685.39063"	"1369.77397"	"1369.77511"	"-0.83"	"-0.00057"	"6/72"	"6"	"72"	"209177.975036621"	"HCD"	"MS2"	"29.17984"	"4.8"	"100.000"	"107.8919"	"35736"	"35736"	"35733"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"5.7"	""	"8.1"	""	"5.4"	""	"10.3"	"10.2"	""	"683"	"37"	"35.000"	"28.000"	"0.00618572641629594"	"22"	"0.0003839"	"0.001689"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFLVNSFLK"	"[-].mFLVNSFLk.[G]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.39099"	"1369.77471"	"1369.77511"	"-0.30"	"-0.00020"	"5/72"	"5"	"72"	"153304.762084961"	"HCD"	"MS2"	"29.73806"	"4.2"	"100.000"	"107.7244"	"35708"	"35708"	"35706"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.5"	""	"4.9"	""	"6.8"	""	"7.3"	""	"6.2"	"8.8"	""	"686"	"29"	"35.000"	"28.000"	"0.0426868511837585"	"14"	"0.0005959"	"0.003677"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFLVNSFLK"	"[-].mFLVNSFLk.[G]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"685.39117"	"1369.77507"	"1369.77511"	"-0.03"	"-0.00002"	"6/72"	"6"	"72"	"271033.264770508"	"HCD"	"MS2"	"15.19142"	"10.2"	"100.000"	"107.9815"	"35751"	"35751"	"35749"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.8"	""	"11.6"	""	"17.8"	""	"16.2"	""	"19.3"	"23.0"	""	"676"	"26"	"35.000"	"28.000"	"0.0792349339578133"	"15"	"0.0002277"	"0.001198"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVFGQPVK"	"[R].hVFGQPVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"685.42084"	"1369.83440"	"1369.83563"	"-0.90"	"-0.00061"	"7/64"	"7"	"64"	"1474576.01635742"	"HCD"	"MS2"	"0"	"111.8"	"100.000"	"30.2435"	"6832"	"6832"	"6806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.1"	""	"157.3"	""	"143.8"	""	"184.2"	""	"183.3"	"225.7"	""	"393"	"30"	"32.000"	"25.000"	"0.0179623251948904"	"20"	"0.0001889"	"0.0004762"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVFGQPVK"	"[R].hVFGQPVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"685.42102"	"1369.83476"	"1369.83563"	"-0.63"	"-0.00043"	"11/64"	"11"	"64"	"997551.631652832"	"HCD"	"MS2"	"0"	"83.6"	"100.000"	"30.1998"	"6773"	"6773"	"6746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.9"	""	"108.4"	""	"120.0"	""	"138.5"	""	"155.5"	"156.6"	""	"393"	"21"	"32.000"	"25.000"	"0.160458435971963"	"18"	"0.0002277"	"0.001189"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDSPALAK"	"[K].lPDSPALAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.42682"	"1369.84636"	"1369.84552"	"0.61"	"0.00042"	"6/66"	"6"	"66"	"963992.112854004"	"HCD"	"MS2"	"0"	"97.3"	"100.000"	"41.6711"	"11503"	"11503"	"11474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.8"	""	"123.0"	""	"129.4"	""	"155.4"	"0.4"	"221.5"	"187.1"	""	"336"	"20"	"32.000"	"25.000"	"0.170729780402277"	"14"	"0.0006037"	"0.003743"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGFLPPPGK"	"[K].vGFLPPPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"457.29144"	"1369.85978"	"1369.86078"	"-0.73"	"-0.00033"	"7/66"	"7"	"66"	"3445363.00671387"	"HCD"	"MS2"	"16.67015"	"122.2"	"100.000"	"47.3369"	"13806"	"13806"	"13778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.0"	""	"177.2"	""	"186.6"	""	"196.7"	"3.4"	"212.4"	"198.4"	""	"266"	"23"	"31.000"	"24.000"	"0.071754912794512"	"16"	"0.0006037"	"0.00433"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGFLPPPGK"	"[K].vGFLPPPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.43353"	"1369.85979"	"1369.86078"	"-0.72"	"-0.00049"	"6/66"	"6"	"66"	"3913367.93481445"	"HCD"	"MS2"	"32.084"	"216.2"	"100.000"	"47.4084"	"13835"	"13835"	"13810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.3"	""	"287.4"	"3.0"	"305.5"	""	"368.4"	"3.0"	"374.7"	"374.2"	""	"266"	"30"	"31.000"	"24.000"	"0.0121857325186226"	"15"	"0.001966"	"0.02938"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGFLPPPGK"	"[K].vGFLPPPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"685.43445"	"1369.86162"	"1369.86078"	"0.61"	"0.00042"	"8/66"	"8"	"66"	"3706612.99060059"	"HCD"	"MS2"	"26.99392"	"217.5"	"100.000"	"47.1562"	"13684"	"13684"	"13656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.8"	""	"298.3"	""	"318.1"	""	"347.8"	"0.1"	"387.6"	"397.0"	""	"267"	"38"	"31.000"	"24.000"	"0.0020113204333593"	"16"	"0.0003146"	"0.001428"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLVLDGPK"	"[K].gLLVLDGPk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"3"	"3"	"0.7805"	"0.0000"	"1"	"1"	"1"	"457.29831"	"1369.88037"	"1369.88191"	"-1.12"	"-0.00051"	"11/64"	"11"	"64"	"4673682.33135986"	"HCD"	"MS2"	"13.87241"	"163.6"	"100.000"	"51.9324"	"15628"	"15628"	"15602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.3"	""	"233.9"	""	"247.4"	""	"270.8"	"0.5"	"313.0"	"291.8"	""	"180"	"41"	"29.000"	"22.000"	"0.00072484059707916"	""	"0.0001889"	"0.0008247"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLVLDGPK"	"[K].gLLVLDGPk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"457.29855"	"1369.88111"	"1369.88191"	"-0.58"	"-0.00027"	"11/64"	"11"	"64"	"3892599.31774902"	"HCD"	"MS2"	"13.98074"	"178.0"	"100.000"	"52.4439"	"15887"	"15887"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.7"	""	"241.9"	""	"260.5"	""	"291.4"	""	"336.1"	"347.6"	""	"180"	"29"	"29.000"	"22.000"	"0.0103572035004999"	"16"	"0.0001889"	"0.001107"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLVLDGPK"	"[K].gLLVLDGPk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8305"	"0.0000"	"1"	"1"	"1"	"685.44427"	"1369.88127"	"1369.88191"	"-0.46"	"-0.00032"	"8/64"	"8"	"64"	"8416254.01623535"	"HCD"	"MS2"	"20.4529"	"531.2"	"100.000"	"51.9189"	"15622"	"15622"	"15602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"675.8"	""	"757.7"	""	"796.2"	""	"866.5"	"4.7"	"932.6"	"998.5"	""	"180"	"59"	"29.000"	"22.000"	"1.23379358954837E-05"	""	"0.0001859"	"0.000326"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLVLDGPK"	"[K].gLLVLDGPk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"685.44440"	"1369.88152"	"1369.88191"	"-0.29"	"-0.00020"	"7/64"	"7"	"64"	"7649444.07574463"	"HCD"	"MS2"	"3.268506"	"506.5"	"100.000"	"52.2228"	"15747"	"15747"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.6"	""	"680.3"	""	"785.9"	""	"821.5"	"0.0"	"946.7"	"991.9"	""	"180"	"44"	"29.000"	"22.000"	"0.000386582784088398"	"21"	"0.0001308"	"0.0002851"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLVLDGPK"	"[K].gLLVLDGPk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"685.44452"	"1369.88176"	"1369.88191"	"-0.11"	"-0.00007"	"8/64"	"8"	"64"	"7287805.64385986"	"HCD"	"MS2"	"0"	"484.7"	"100.000"	"52.4276"	"15880"	"15880"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"554.9"	""	"644.8"	""	"720.5"	""	"779.1"	"2.6"	"910.1"	"985.0"	""	"180"	"43"	"29.000"	"22.000"	"0.000405735034087314"	"21"	"0.0001308"	"0.0002519"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLVLDGPK"	"[K].gLLVLDGPk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.29898"	"1369.88239"	"1369.88191"	"0.35"	"0.00016"	"7/64"	"7"	"64"	"2527056.92736816"	"HCD"	"MS2"	"20.7731"	"153.5"	"100.000"	"52.2915"	"15775"	"15775"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"188.5"	""	"193.3"	""	"203.9"	""	"251.6"	""	"297.7"	"321.9"	""	"200"	"8"	"30.000"	"23.000"	"1.49968483550237"	"13"	"0.0005564"	"0.003626"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLVLDGPK"	"[K].gLLVLDGPk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"457.29901"	"1369.88248"	"1369.88191"	"0.42"	"0.00019"	"11/64"	"11"	"64"	"5037707.81542969"	"HCD"	"MS2"	"0"	"176.8"	"100.000"	"52.1349"	"15761"	"15761"	"15734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.8"	""	"262.1"	""	"278.7"	""	"293.5"	"1.9"	"307.2"	"317.4"	""	"198"	"36"	"29.000"	"22.000"	"0.00269547429499714"	"17"	"0.0001889"	"0.0004276"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLVLDGPK"	"[K].gLLVLDGPk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"685.44501"	"1369.88274"	"1369.88191"	"0.61"	"0.00041"	"8/64"	"8"	"64"	"8703266.02624512"	"HCD"	"MS2"	"21.57174"	"534.4"	"100.000"	"52.1164"	"15753"	"15753"	"15734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"681.9"	""	"749.8"	""	"832.6"	""	"841.5"	"4.0"	"955.0"	"997.3"	""	"198"	"56"	"29.000"	"22.000"	"2.29422070346879E-05"	""	"0.0001859"	"0.0003436"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVWYNSFR"	"[R].lGVWYNSFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"685.87415"	"1370.74101"	"1370.74184"	"-0.60"	"-0.00041"	"8/70"	"8"	"70"	"3181717.97680664"	"HCD"	"MS2"	"36.06172"	"186.5"	"100.000"	"58.4932"	"18289"	"18289"	"18266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"241.6"	""	"251.9"	""	"276.7"	""	"307.7"	"0.6"	"326.7"	"361.6"	""	"728"	"35"	"35.000"	"28.000"	"0.0125921933528708"	"19"	"0.0001889"	"0.0004036"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLYTEVTR"	"[K].mLLYTEVTR.[Y]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"685.88049"	"1370.75371"	"1370.75510"	"-1.02"	"-0.00070"	"7/70"	"7"	"70"	"1141929.69989014"	"HCD"	"MS2"	"42.0866"	"100.6"	"100.000"	"40.1476"	"10835"	"10835"	"10805"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.4"	""	"147.8"	""	"147.9"	""	"139.3"	""	"181.6"	"182.3"	""	"773"	"22"	"35.000"	"28.000"	"0.230223418473963"	"17"	"0.003945"	"0.1003"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFLVNSFLK"	"[-].mFLVnSFLk.[G]"	"N-Term(Prot)(Acetyl); N5(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.88269"	"1370.75810"	"1370.75913"	"-0.75"	"-0.00051"	"5/72"	"5"	"72"	"120026.689331055"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"99.3435"	"33987"	"33987"	"33982"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"7.6"	""	"6.3"	""	"7.5"	""	"11.0"	"11.2"	""	"765"	"20"	"35.000"	"28.000"	"0.422310072112543"	"14"	"0.003383"	"0.07623"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFLVNSFLK"	"[-].mFLVnSFLk.[G]"	"N-Term(Prot)(Acetyl); N5(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"685.88275"	"1370.75823"	"1370.75913"	"-0.66"	"-0.00045"	"5/72"	"5"	"72"	"107253.104370117"	"HCD"	"MS2"	"22.11373"	"4.2"	"100.000"	"99.1530"	"33926"	"33926"	"33923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"2.7"	""	"8.1"	""	"9.2"	""	"8.1"	"8.4"	""	"765"	"29"	"35.000"	"28.000"	"0.0503073498313531"	"20"	"0.0006037"	"0.005932"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"457.60565"	"1370.80240"	"1370.80439"	"-1.45"	"-0.00066"	"11/62"	"11"	"62"	"52461082.6767578"	"HCD"	"MS2"	"14.86232"	"1202.7"	"63.542"	"29.3513"	"6425"	"6425"	"6406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1362.4"	""	"1078.3"	""	"1102.9"	""	"2666.4"	""	"2813.8"	"2419.4"	""	"537"	"40"	"34.000"	"27.000"	"0.00256415509346755"	"24"	"0.0001889"	"0.0005251"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"457.60571"	"1370.80259"	"1370.80439"	"-1.31"	"-0.00060"	"12/62"	"12"	"62"	"72581698.4399414"	"HCD"	"MS2"	"5.095246"	"298.9"	"11.565"	"29.6426"	"6545"	"6545"	"6528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.0"	""	"237.8"	""	"287.9"	""	"629.1"	""	"719.2"	"666.1"	""	"526"	"36"	"34.000"	"27.000"	"0.00638198455006676"	"24"	"0.0001889"	"0.0005414"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"457.60577"	"1370.80277"	"1370.80439"	"-1.18"	"-0.00054"	"12/62"	"12"	"62"	"37142288.9318848"	"HCD"	"MS2"	"6.02852"	"306.5"	"22.541"	"29.7737"	"6639"	"6639"	"6620"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"318.8"	""	"271.8"	""	"295.2"	""	"671.0"	""	"709.9"	"651.5"	""	"529"	"37"	"34.000"	"27.000"	"0.0050515618689077"	"23"	"0.0001889"	"0.000438"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90503"	"1370.80278"	"1370.80439"	"-1.17"	"-0.00080"	"7/62"	"7"	"62"	"5445878.42193604"	"HCD"	"MS2"	"0"	"336.9"	"100.000"	"29.3696"	"6433"	"6433"	"6406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"386.7"	""	"290.1"	""	"294.4"	""	"756.8"	"2.7"	"765.6"	"708.6"	""	"514"	"43"	"34.000"	"27.000"	"0.00134565312202538"	"18"	"0.0001889"	"0.0005827"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"685.90521"	"1370.80315"	"1370.80439"	"-0.90"	"-0.00062"	"14/62"	"14"	"62"	"1352400.42559814"	"HCD"	"MS2"	"0"	"96.0"	"100.000"	"29.7485"	"6629"	"6629"	"6605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.5"	""	"84.3"	""	"89.6"	""	"203.9"	"0.4"	"217.1"	"206.8"	""	"512"	"46"	"34.000"	"27.000"	"0.000701842988013538"	"20"	"0.0001308"	"0.000302"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"457.60593"	"1370.80323"	"1370.80439"	"-0.85"	"-0.00039"	"11/62"	"11"	"62"	"258793778.234863"	"HCD"	"MS2"	"5.802376"	"742.6"	"8.888"	"29.4735"	"6517"	"6517"	"6500"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"791.4"	""	"593.3"	""	"648.3"	""	"1707.5"	"1.3"	"1761.7"	"1565.1"	""	"512"	"39"	"34.000"	"27.000"	"0.00360777932396"	"23"	"0.0002277"	"0.001145"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90552"	"1370.80376"	"1370.80439"	"-0.46"	"-0.00031"	"7/62"	"7"	"62"	"1250307.83666992"	"HCD"	"MS2"	"0"	"91.1"	"100.000"	"29.6882"	"6563"	"6563"	"6544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.8"	""	"80.0"	""	"85.7"	""	"192.6"	""	"210.7"	"198.8"	""	"513"	"43"	"34.000"	"27.000"	"0.00142261495373704"	"18"	"0.0001308"	"0.0002474"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90552"	"1370.80376"	"1370.80439"	"-0.46"	"-0.00031"	"7/62"	"7"	"62"	"7210943.54241943"	"HCD"	"MS2"	"0"	"421.9"	"100.000"	"29.4505"	"6507"	"6507"	"6484"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"459.0"	""	"337.0"	""	"380.4"	""	"970.7"	""	"986.8"	"883.2"	""	"513"	"43"	"34.000"	"27.000"	"0.00135234459454954"	"18"	"0.0001889"	"0.0006832"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLLTLVK"	"[R].ePLLTLVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.95410"	"1370.90093"	"1370.90231"	"-1.01"	"-0.00069"	"12/64"	"12"	"64"	"3076019.25054932"	"HCD"	"MS2"	"38.39182"	"192.1"	"100.000"	"58.3784"	"18242"	"18242"	"18218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.2"	""	"250.0"	""	"290.2"	""	"309.8"	"1.6"	"344.7"	"369.8"	""	"137"	"15"	"28.000"	"21.000"	"0.227871794006393"	"13"	"0.0004166"	"0.002304"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLLTLVK"	"[R].ePLLTLVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.63873"	"1370.90165"	"1370.90231"	"-0.48"	"-0.00022"	"6/64"	"6"	"64"	"2460726.79541016"	"HCD"	"MS2"	"17.04054"	"111.4"	"100.000"	"58.3660"	"18291"	"18291"	"18261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.1"	""	"170.2"	""	"169.2"	""	"184.0"	""	"172.3"	"191.6"	""	"137"	"28"	"28.000"	"21.000"	"0.0115528882239129"	"14"	"0.0004166"	"0.002294"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLLTLVK"	"[R].ePLLTLVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.95490"	"1370.90251"	"1370.90231"	"0.15"	"0.00010"	"6/64"	"6"	"64"	"3322344.72930908"	"HCD"	"MS2"	"31.17026"	"200.0"	"100.000"	"58.5474"	"18365"	"18365"	"18341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.3"	""	"264.1"	""	"306.7"	""	"324.8"	"1.0"	"354.9"	"375.9"	""	"136"	"14"	"28.000"	"21.000"	"0.300267904200252"	"13"	"0.0002277"	"0.001204"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLLTLVK"	"[R].ePLLTLVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.95605"	"1370.90483"	"1370.90231"	"1.84"	"0.00126"	"7/64"	"7"	"64"	"6357820.65075684"	"HCD"	"MS2"	"40.10094"	"389.3"	"100.000"	"58.0452"	"18106"	"18106"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"545.4"	""	"501.0"	""	"544.7"	""	"689.1"	"2.6"	"694.0"	"710.9"	""	"129"	"44"	"28.000"	"21.000"	"0.000245222160626762"	"15"	"0.0001889"	"0.0009289"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLLTLVK"	"[R].ePLLTLVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.95618"	"1370.90508"	"1370.90231"	"2.02"	"0.00138"	"7/64"	"7"	"64"	"6738887.1072998"	"HCD"	"MS2"	"10.13457"	"406.1"	"100.000"	"58.2260"	"18233"	"18233"	"18213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"596.4"	""	"524.4"	""	"534.4"	""	"714.5"	"1.8"	"738.0"	"737.3"	""	"129"	"44"	"28.000"	"21.000"	"0.000248061699419253"	"15"	"0.0002277"	"0.001184"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTYFPGK"	"[K].nSTYFPGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"686.38623"	"1371.76518"	"1371.76727"	"-1.52"	"-0.00104"	"6/72"	"6"	"72"	"3018207.83679199"	"HCD"	"MS2"	"12.52386"	"271.6"	"100.000"	"36.2144"	"9224"	"9224"	"9194"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"330.2"	""	"310.4"	""	"309.8"	""	"495.7"	""	"595.5"	"540.4"	""	"688"	"28"	"35.000"	"28.000"	"0.0592322789795186"	"16"	"0.0001889"	"0.0008788"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTYFPGK"	"[K].nSTYFPGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"686.38751"	"1371.76775"	"1371.76727"	"0.35"	"0.00024"	"7/72"	"7"	"72"	"4552726.22637939"	"HCD"	"MS2"	"41.69716"	"370.2"	"100.000"	"36.2258"	"9272"	"9272"	"9241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"454.7"	""	"416.2"	""	"423.7"	""	"658.6"	""	"797.0"	"771.3"	""	"686"	"31"	"35.000"	"28.000"	"0.0302199763441749"	"19"	"0.0001889"	"0.000736"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVWNGHLLR"	"[R].fVWnGHLLR.[E]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"457.92877"	"1371.77176"	"1371.77347"	"-1.25"	"-0.00057"	"8/76"	"8"	"76"	"7822949.36737061"	"HCD"	"MS2"	"0"	"140.1"	"100.000"	"53.0307"	"16127"	"16127"	"16102"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.0"	""	"205.0"	""	"195.2"	""	"249.2"	""	"258.5"	"264.0"	""	"675"	"48"	"35.000"	"28.000"	"0.000491217439696413"	"21"	"0"	"0.000159"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVWNGHLLR"	"[R].fVWnGHLLR.[E]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"457.92938"	"1371.77359"	"1371.77347"	"0.09"	"0.00004"	"7/76"	"7"	"76"	"7681721.05584717"	"HCD"	"MS2"	"5.708412"	"127.8"	"100.000"	"52.8322"	"15996"	"15996"	"15970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.6"	""	"177.0"	""	"171.2"	""	"229.9"	""	"234.5"	"259.2"	""	"693"	"44"	"35.000"	"28.000"	"0.00129629318836266"	"22"	"0.0001889"	"0.0004383"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFSQYIK"	"[K].qFSQYIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"457.93912"	"1371.80280"	"1371.80366"	"-0.63"	"-0.00029"	"7/60"	"7"	"60"	"2503315.35552979"	"HCD"	"MS2"	"12.15136"	"129.6"	"100.000"	"41.0774"	"11260"	"11260"	"11229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.1"	""	"155.2"	""	"188.1"	""	"205.4"	"3.8"	"256.2"	"241.6"	""	"632"	"17"	"34.000"	"28.000"	"0.567135826079078"	"20"	"0.006001"	"0.2096"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFSQYIK"	"[K].qFSQYIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"686.40533"	"1371.80339"	"1371.80366"	"-0.19"	"-0.00013"	"12/60"	"12"	"60"	"8790975.74981689"	"HCD"	"MS2"	"0"	"794.1"	"100.000"	"40.7930"	"11099"	"11099"	"11077"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1162.6"	""	"971.5"	""	"1018.3"	""	"1265.0"	"9.2"	"1515.1"	"1588.2"	""	"631"	"31"	"34.000"	"28.000"	"0.0239331224921708"	"25"	"0.0006737"	"0.006553"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFSQYIK"	"[K].qFSQYIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"686.40540"	"1371.80351"	"1371.80366"	"-0.10"	"-0.00007"	"5/60"	"5"	"60"	"7814103.9453125"	"HCD"	"MS2"	"0"	"652.0"	"100.000"	"40.9397"	"11203"	"11203"	"11181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"965.6"	""	"820.4"	""	"843.0"	""	"1034.3"	"5.0"	"1196.2"	"1315.1"	""	"633"	"32"	"35.000"	"28.000"	"0.0220990555890425"	"21"	"0.0006037"	"0.005895"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDYVPIGPR"	"[R].lLDYVPIGPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"686.41339"	"1371.81951"	"1371.81975"	"-0.18"	"-0.00012"	"9/72"	"9"	"72"	"5041535.00213623"	"HCD"	"MS2"	"7.245667"	"244.0"	"100.000"	"62.6898"	"19998"	"19998"	"19977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"354.1"	""	"337.9"	""	"361.8"	""	"394.5"	""	"450.3"	"412.4"	""	"576"	"50"	"34.000"	"27.000"	"0.000288663908566435"	"17"	"0"	"5.766E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDYVPIGPR"	"[R].lLDYVPIGPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"457.94470"	"1371.81955"	"1371.81975"	"-0.15"	"-0.00007"	"8/72"	"8"	"72"	"1470708.49694824"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"62.9210"	"20146"	"20146"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.1"	""	"42.4"	""	"43.0"	""	"49.4"	"1.5"	"61.1"	"46.4"	""	"576"	"28"	"34.000"	"27.000"	"0.04913517280329"	"19"	"0.0001889"	"0.0004177"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDYVPIGPR"	"[R].lLDYVPIGPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"686.41382"	"1371.82036"	"1371.81975"	"0.44"	"0.00030"	"9/72"	"9"	"72"	"6001708.74505615"	"HCD"	"MS2"	"5.050411"	"269.7"	"100.000"	"62.8126"	"20101"	"20101"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"381.9"	""	"373.2"	""	"428.4"	""	"424.0"	"2.4"	"482.8"	"460.5"	""	"594"	"51"	"34.000"	"27.000"	"0.000259870181242549"	"17"	"0"	"0.0001141"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDYVPIGPR"	"[R].lLDYVPIGPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"457.94519"	"1371.82102"	"1371.81975"	"0.92"	"0.00042"	"8/72"	"8"	"72"	"1150338.10638428"	"HCD"	"MS2"	"5.851546"	"26.0"	"100.000"	"62.8626"	"20069"	"20069"	"20041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.5"	""	"38.0"	""	"40.7"	""	"40.6"	"1.9"	"44.8"	"42.9"	""	"587"	"26"	"34.000"	"27.000"	"0.0730479622915882"	"19"	"0.0001889"	"0.0004391"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVANSRPAK"	"[R].aVANSRPAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.95279"	"1371.84381"	"1371.84725"	"-2.51"	"-0.00115"	"7/74"	"7"	"74"	"651571.127258301"	"HCD"	"MS2"	"15.4983"	"71.8"	"100.000"	"22.5274"	"3717"	"3717"	"3705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.9"	""	"121.8"	""	"131.7"	""	"101.3"	""	"99.3"	"105.5"	""	"450"	"2"	"33.000"	"26.000"	"14.9686460145392"	"13"	"0.002651"	"0.03945"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVANSRPAK"	"[R].aVANSRPAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.95337"	"1371.84555"	"1371.84725"	"-1.24"	"-0.00057"	"9/74"	"9"	"74"	"1599647.32354736"	"HCD"	"MS2"	"16.41918"	"131.5"	"100.000"	"22.4758"	"3731"	"3731"	"3721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.9"	""	"242.3"	""	"228.3"	""	"147.6"	"0.3"	"165.4"	"184.7"	""	"472"	"13"	"33.000"	"26.000"	"1.18826143673945"	"13"	"0.0001889"	"0.001081"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAEILGIK"	"[K].vAAEILGIk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P51158"	"Ras-related protein Rab-28 OS=Rattus norvegicus OX=10116 GN=Rab28 PE=2 SV=1"	"P51158"	"Ras-related protein Rab-28 OS=Rattus norvegicus OX=10116 GN=Rab28 PE=2 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"686.45190"	"1371.89653"	"1371.89756"	"-0.75"	"-0.00051"	"14/64"	"14"	"64"	"2116730.16906738"	"HCD"	"MS2"	"19.73002"	"154.7"	"100.000"	"58.9405"	"18468"	"18468"	"18441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.2"	""	"208.1"	""	"239.4"	""	"259.5"	"0.1"	"274.5"	"280.0"	""	"208"	"48"	"30.000"	"23.000"	"0.000170621336412752"	""	"0.0001308"	"0.000229"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAEILGIK"	"[K].vAAEILGIk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P51158"	"Ras-related protein Rab-28 OS=Rattus norvegicus OX=10116 GN=Rab28 PE=2 SV=1"	"P51158"	"Ras-related protein Rab-28 OS=Rattus norvegicus OX=10116 GN=Rab28 PE=2 SV=1"	"0"	"2"	"2"	"0.6458"	"0.0000"	"1"	"1"	"1"	"686.45239"	"1371.89751"	"1371.89756"	"-0.04"	"-0.00002"	"14/64"	"14"	"64"	"2309771.89581299"	"HCD"	"MS2"	"39.78796"	"167.2"	"100.000"	"59.0764"	"18576"	"18576"	"18549"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.2"	""	"218.7"	""	"253.2"	""	"284.3"	"0.7"	"303.9"	"296.8"	""	"210"	"48"	"30.000"	"23.000"	"0.00017186573474992"	""	"0.0001308"	"0.0002281"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNMVPFPR.[L]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"686.90082"	"1372.79436"	"1372.79724"	"-2.10"	"-0.00144"	"9/86"	"9"	"86"	"10015010.7130127"	"HCD"	"MS2"	"20.29647"	"394.8"	"100.000"	"59.3807"	"18700"	"18700"	"18677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"636.2"	""	"619.0"	""	"616.7"	""	"456.9"	"4.3"	"687.8"	"715.1"	""	"799"	"49"	"36.000"	"29.000"	"0.000560424074972503"	"20"	"7.476E-05"	"0.0002003"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNMVPFPR.[L]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"686.90118"	"1372.79509"	"1372.79724"	"-1.57"	"-0.00108"	"6/86"	"6"	"86"	"1047927.28106689"	"HCD"	"MS2"	"40.53633"	"79.3"	"100.000"	"60.3687"	"19104"	"19104"	"19075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.1"	""	"106.9"	""	"99.0"	""	"131.0"	"4.3"	"162.7"	"144.3"	""	"793"	"25"	"35.000"	"28.000"	"0.124521169712192"	"21"	"0.0001889"	"0.0006205"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNMVPFPR.[L]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"458.26996"	"1372.79532"	"1372.79724"	"-1.40"	"-0.00064"	"10/86"	"10"	"86"	"15259715.2489014"	"HCD"	"MS2"	"10.48076"	"96.9"	"100.000"	"59.4527"	"18729"	"18729"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.2"	""	"138.0"	""	"172.9"	""	"108.0"	""	"164.9"	"175.2"	""	"793"	"47"	"35.000"	"28.000"	"0.000826500635148075"	"21"	"0"	"0.0001162"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNMVPFPR.[L]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"686.90143"	"1372.79558"	"1372.79724"	"-1.21"	"-0.00083"	"9/86"	"9"	"86"	"8019306.03552246"	"HCD"	"MS2"	"25.59731"	"337.3"	"100.000"	"59.2219"	"18582"	"18582"	"18553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"532.5"	""	"529.5"	""	"520.5"	""	"408.4"	"2.8"	"575.3"	"623.0"	""	"789"	"38"	"35.000"	"28.000"	"0.00639804083408098"	"20"	"0"	"0.0001159"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNMVPFPR.[L]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"458.27039"	"1372.79660"	"1372.79724"	"-0.47"	"-0.00021"	"10/86"	"10"	"86"	"21768628.8929443"	"HCD"	"MS2"	"1.974021"	"53.0"	"37.935"	"59.5448"	"18714"	"18714"	"18697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.4"	""	"86.2"	""	"81.4"	""	"59.0"	"0.7"	"98.4"	"96.8"	""	"779"	"43"	"35.000"	"28.000"	"0.00188585137174007"	"20"	"0.0001308"	"0.0002346"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNMVPFPR.[L]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"458.27039"	"1372.79660"	"1372.79724"	"-0.47"	"-0.00021"	"9/86"	"9"	"86"	"6814711.20288086"	"HCD"	"MS2"	"16.11039"	"65.0"	"100.000"	"59.2636"	"18599"	"18599"	"18569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.9"	""	"100.9"	""	"107.3"	""	"93.2"	""	"112.8"	"114.2"	""	"779"	"30"	"35.000"	"28.000"	"0.0351971470014836"	"17"	"0.0001889"	"0.0008458"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNMVPFPR.[L]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"686.90234"	"1372.79741"	"1372.79724"	"0.12"	"0.00008"	"7/86"	"7"	"86"	"1128358.70068359"	"HCD"	"MS2"	"43.12107"	"78.8"	"100.000"	"60.2052"	"18984"	"18984"	"18953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.8"	""	"92.6"	""	"112.5"	""	"127.5"	"1.0"	"162.0"	"155.3"	""	"768"	"25"	"35.000"	"28.000"	"0.123404564683788"	"21"	"0.0001889"	"0.0007532"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNMVPFPR.[L]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"458.27069"	"1372.79752"	"1372.79724"	"0.20"	"0.00009"	"10/86"	"10"	"86"	"8185631.85687256"	"HCD"	"MS2"	"1.490763"	"61.7"	"100.000"	"59.7564"	"18854"	"18854"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.1"	""	"88.9"	""	"101.7"	""	"67.7"	"0.7"	"111.6"	"124.2"	""	"796"	"49"	"35.000"	"29.000"	"0.000508022645906915"	"22"	"0"	"0.0001425"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNMVPFPR.[L]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"686.90259"	"1372.79790"	"1372.79724"	"0.48"	"0.00033"	"9/86"	"9"	"86"	"72051754.3549805"	"HCD"	"MS2"	"0.1005913"	"276.2"	"9.714"	"59.6784"	"18822"	"18822"	"18805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"450.0"	""	"421.4"	""	"458.9"	""	"274.2"	""	"475.0"	"536.9"	""	"796"	"49"	"35.000"	"29.000"	"0.000525875662406257"	"20"	"0.0001308"	"0.0003123"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNMVPFPR.[L]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"686.90363"	"1372.79997"	"1372.79724"	"1.99"	"0.00137"	"9/86"	"9"	"86"	"103378567.818359"	"HCD"	"MS2"	"0"	"288.2"	"7.074"	"59.5057"	"18698"	"18698"	"18681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"481.7"	""	"430.0"	""	"483.4"	""	"275.3"	"0.6"	"510.6"	"545.5"	""	"793"	"49"	"35.000"	"28.000"	"0.000529960122310664"	"20"	"0.0001889"	"0.0004206"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMVLNYK"	"[R].fMVLNYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"686.90588"	"1372.80449"	"1372.80630"	"-1.32"	"-0.00090"	"6/54"	"6"	"54"	"2986053.5222168"	"HCD"	"MS2"	"26.34537"	"259.1"	"100.000"	"56.5788"	"17506"	"17506"	"17483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"403.1"	""	"375.1"	""	"372.4"	""	"297.5"	"2.2"	"479.8"	"525.1"	""	"744"	"26"	"35.000"	"28.000"	"0.083664831337091"	"16"	"0.0005564"	"0.003575"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMVLNYK"	"[R].fMVLNYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"686.90607"	"1372.80486"	"1372.80630"	"-1.05"	"-0.00072"	"6/54"	"6"	"54"	"3394679.44592285"	"HCD"	"MS2"	"31.62907"	"267.9"	"100.000"	"56.7539"	"17632"	"17632"	"17605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"440.7"	""	"399.2"	""	"380.9"	""	"304.1"	"1.5"	"466.3"	"544.1"	""	"743"	"28"	"35.000"	"28.000"	"0.0616536536113053"	"21"	"0.0004166"	"0.002399"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFVLFK"	"[R].gFGFVLFk.[ED]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54; Q3SWU3"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus OX=10116 GN=Hnrnpdl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"686.92291"	"1372.83855"	"1372.83932"	"-0.56"	"-0.00038"	"14/58"	"14"	"58"	"2568912.45922852"	"HCD"	"MS2"	"13.38719"	"221.1"	"100.000"	"73.6507"	"24517"	"24517"	"24495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"253.7"	""	"265.5"	""	"284.5"	""	"430.2"	"2.5"	"414.3"	"447.5"	""	"483"	"43"	"33.000"	"26.000"	"0.00116122702650609"	"15"	"0.0001889"	"0.0003814"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFVLFK"	"[R].gFGFVLFk.[ED]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54; Q3SWU3"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus OX=10116 GN=Hnrnpdl PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"686.92310"	"1372.83891"	"1372.83932"	"-0.29"	"-0.00020"	"7/58"	"7"	"58"	"2547119.10327148"	"HCD"	"MS2"	"12.36724"	"215.2"	"100.000"	"73.6574"	"24468"	"24468"	"24449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.1"	""	"262.8"	""	"286.2"	""	"417.2"	""	"397.4"	"448.0"	""	"483"	"42"	"33.000"	"26.000"	"0.00157731028464364"	"21"	"0.0001889"	"0.0003845"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPVITGSK"	"[R].nVPVITGSk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"686.93115"	"1372.85503"	"1372.85642"	"-1.02"	"-0.00070"	"6/84"	"6"	"84"	"4060379.71008301"	"HCD"	"MS2"	"0"	"274.0"	"100.000"	"37.1086"	"9591"	"9591"	"9562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.7"	""	"402.3"	""	"412.5"	""	"392.8"	""	"488.4"	"540.2"	""	"454"	"42"	"33.000"	"26.000"	"0.0015959741661363"	"17"	"0.0001308"	"0.0002764"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEAIVQK"	"[K].nLEAIVQk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"686.93121"	"1372.85515"	"1372.85642"	"-0.93"	"-0.00064"	"7/70"	"7"	"70"	"2621077.81665039"	"HCD"	"MS2"	"19.73609"	"255.0"	"100.000"	"43.0078"	"12048"	"12048"	"12019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.1"	""	"301.5"	""	"323.8"	""	"446.0"	""	"490.0"	"503.7"	""	"454"	"23"	"33.000"	"26.000"	"0.115884634994417"	""	"0.0006037"	"0.006133"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPVITGSK"	"[R].nVPVITGSk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"686.93127"	"1372.85527"	"1372.85642"	"-0.84"	"-0.00057"	"6/84"	"6"	"84"	"4142082.0435791"	"HCD"	"MS2"	"0"	"279.6"	"100.000"	"37.2227"	"9681"	"9681"	"9654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.5"	""	"406.9"	""	"421.2"	""	"429.9"	""	"477.5"	"547.0"	""	"454"	"44"	"33.000"	"26.000"	"0.000818513519659129"	"18"	"0.0001308"	"0.0002668"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDVIQAGK"	"[R].aLDVIQAGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q642C0"	"DnaJ homolog subfamily C member 8 OS=Rattus norvegicus OX=10116 GN=Dnajc8 PE=2 SV=1"	"Q642C0"	"DnaJ homolog subfamily C member 8 OS=Rattus norvegicus OX=10116 GN=Dnajc8 PE=2 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"686.93384"	"1372.86040"	"1372.85642"	"2.90"	"0.00199"	"8/70"	"8"	"70"	"4663794.87182617"	"HCD"	"MS2"	"32.70028"	"397.7"	"100.000"	"41.9575"	"11575"	"11575"	"11557"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"423.5"	""	"457.1"	""	"488.4"	""	"626.1"	""	"865.7"	"929.5"	""	"451"	"12"	"33.000"	"26.000"	"1.39042172919764"	"19"	"0.0001889"	"0.00102"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTVAVGVIK"	"[R].qTVAVGVIk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"686.94928"	"1372.89128"	"1372.89281"	"-1.11"	"-0.00076"	"8/80"	"8"	"80"	"10228935.8301392"	"HCD"	"MS2"	"0"	"673.0"	"100.000"	"38.5220"	"10214"	"10214"	"10193"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"760.6"	""	"969.1"	""	"1026.3"	""	"1205.9"	"2.5"	"1169.7"	"1241.6"	""	"334"	"59"	"32.000"	"25.000"	"2.13656677794307E-05"	"25"	"7.476E-05"	"0.000194"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTVAVGVIK"	"[R].qTVAVGVIk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"686.94958"	"1372.89189"	"1372.89281"	"-0.67"	"-0.00046"	"8/80"	"8"	"80"	"9599375.28601074"	"HCD"	"MS2"	"0"	"608.6"	"100.000"	"38.4153"	"10127"	"10127"	"10103"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"695.0"	""	"888.2"	""	"919.1"	""	"1092.0"	""	"1055.6"	"1115.9"	""	"334"	"59"	"32.000"	"25.000"	"2.09274576215216E-05"	"25"	"7.476E-05"	"0.000187"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTVAVGVIK"	"[R].qTVAVGVIk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"686.95044"	"1372.89360"	"1372.89281"	"0.58"	"0.00040"	"12/80"	"12"	"80"	"2273534.07501221"	"HCD"	"MS2"	"0"	"183.9"	"100.000"	"38.8426"	"10346"	"10346"	"10318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.1"	""	"237.8"	""	"271.7"	""	"330.1"	"10.4"	"291.3"	"372.9"	""	"327"	"37"	"32.000"	"25.000"	"0.00306561602069023"	"20"	"0.0001308"	"0.0002385"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWELIK"	"[R].iIWELIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"3"	"686.95081"	"1372.89433"	"1372.89683"	"-1.82"	"-0.00125"	"12/48"	"12"	"48"	"3055850.53094482"	"HCD"	"MS2"	"47.10257"	"194.7"	"100.000"	"77.9551"	"26262"	"26262"	"26241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.3"	""	"303.2"	""	"330.0"	""	"300.0"	""	"305.5"	"333.4"	""	"327"	"32"	"32.000"	"25.000"	"0.0093007454192968"	""	"0.0006037"	"0.005805"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWELIK"	"[R].iIWELIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"3"	"3"	"0.3462"	"0.0000"	"1"	"1"	"3"	"458.30298"	"1372.89438"	"1372.89683"	"-1.78"	"-0.00082"	"5/48"	"5"	"48"	"583166.051818848"	"HCD"	"MS2"	"18.52617"	"25.1"	"100.000"	"78.1254"	"26332"	"26332"	"26303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.4"	""	"34.5"	""	"40.5"	""	"39.3"	"0.7"	"37.6"	"47.7"	""	"327"	"26"	"32.000"	"25.000"	"0.0432033831822138"	""	"0.000523"	"0.003099"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWELIK"	"[R].iIWELIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"3"	"458.30325"	"1372.89521"	"1372.89683"	"-1.18"	"-0.00054"	"7/48"	"7"	"48"	"520754.219970703"	"HCD"	"MS2"	"12.35395"	"23.5"	"100.000"	"78.1677"	"26298"	"26298"	"26273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.1"	""	"37.6"	""	"34.8"	""	"41.7"	""	"37.3"	"43.0"	""	"278"	"22"	"31.000"	"24.000"	"0.097278037444316"	""	"0.0005564"	"0.003495"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWELIK"	"[R].iIWELIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"3"	"686.95154"	"1372.89580"	"1372.89683"	"-0.75"	"-0.00052"	"5/48"	"5"	"48"	"2932466.02258301"	"HCD"	"MS2"	"20.78992"	"181.3"	"100.000"	"77.9975"	"26228"	"26228"	"26215"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"281.3"	""	"262.8"	""	"300.9"	""	"285.9"	""	"283.4"	"298.7"	""	"278"	"33"	"31.000"	"24.000"	"0.00727804606854192"	""	"0.0003839"	"0.001734"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWELIK"	"[R].iIWELIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"3"	"686.95172"	"1372.89617"	"1372.89683"	"-0.48"	"-0.00033"	"5/48"	"5"	"48"	"2454208.94232178"	"HCD"	"MS2"	"2.88737"	"149.1"	"100.000"	"78.2526"	"26384"	"26384"	"26367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.1"	""	"221.3"	""	"246.0"	""	"237.2"	""	"229.3"	"249.4"	""	"278"	"33"	"31.000"	"24.000"	"0.00687091854911701"	""	"0.000523"	"0.002997"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWELIK"	"[R].iIWELIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"3"	"686.95209"	"1372.89690"	"1372.89683"	"0.05"	"0.00003"	"5/48"	"5"	"48"	"1996223.17706299"	"HCD"	"MS2"	"5.753093"	"134.1"	"100.000"	"78.3084"	"26355"	"26355"	"26337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"202.3"	""	"189.4"	""	"229.2"	""	"192.8"	""	"217.2"	"238.6"	""	"278"	"33"	"31.000"	"24.000"	"0.00758603426916866"	""	"0.0003839"	"0.001631"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQWWLNLR"	"[R].eQWWLNLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"687.37903"	"1373.75078"	"1373.75274"	"-1.42"	"-0.00098"	"5/68"	"5"	"68"	"4051271.89605713"	"HCD"	"MS2"	"9.945154"	"239.9"	"100.000"	"61.6389"	"19622"	"19622"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"300.6"	""	"285.4"	""	"277.1"	""	"424.4"	"2.8"	"451.0"	"535.8"	""	"801"	"28"	"36.000"	"29.000"	"0.0637679595183993"	"25"	"0.0003839"	"0.001808"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQWWLNLR"	"[R].eQWWLNLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"687.38037"	"1373.75347"	"1373.75274"	"0.53"	"0.00036"	"5/68"	"5"	"68"	"4152947.3649292"	"HCD"	"MS2"	"9.87156"	"249.5"	"100.000"	"61.4344"	"19485"	"19485"	"19465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.8"	""	"304.8"	""	"321.9"	""	"417.4"	"3.4"	"454.3"	"515.5"	""	"819"	"28"	"36.000"	"29.000"	"0.060989336132262"	"27"	"0.0002277"	"0.001342"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVnMVPFPR.[L]"	"N-Term(TMT6plex); N4(Deamidated)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"687.39319"	"1373.77910"	"1373.78126"	"-1.57"	"-0.00108"	"10/86"	"10"	"86"	"3045088.20916748"	"HCD"	"MS2"	"19.05247"	"158.0"	"100.000"	"60.5949"	"19143"	"19143"	"19113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.2"	""	"207.0"	""	"233.3"	""	"207.3"	"6.3"	"285.5"	"328.8"	""	"910"	"23"	"36.000"	"29.000"	"0.208935095840775"	"20"	"0"	"0.0001028"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVnMVPFPR.[L]"	"N-Term(TMT6plex); N4(Deamidated)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"687.39325"	"1373.77922"	"1373.78126"	"-1.48"	"-0.00102"	"9/86"	"9"	"86"	"3028322.11950684"	"HCD"	"MS2"	"18.12804"	"165.5"	"100.000"	"60.7493"	"19259"	"19259"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.7"	""	"233.5"	""	"239.2"	""	"224.4"	"5.1"	"304.3"	"330.0"	""	"910"	"28"	"36.000"	"29.000"	"0.070147370609205"	"20"	"0.0001889"	"0.0004713"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSWILMR"	"[R].eLPSWILMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"687.39386"	"1373.78044"	"1373.78126"	"-0.59"	"-0.00041"	"7/70"	"7"	"70"	"7216907.33813477"	"HCD"	"MS2"	"20.86201"	"354.7"	"100.000"	"68.2162"	"22299"	"22299"	"22282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"462.1"	""	"511.1"	""	"456.5"	""	"446.2"	"2.2"	"710.8"	"778.2"	""	"878"	"40"	"36.000"	"29.000"	"0.00482463563510876"	"24"	"0.0001889"	"0.0004267"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSWILMR"	"[R].eLPSWILMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"687.39453"	"1373.78179"	"1373.78126"	"0.38"	"0.00026"	"7/70"	"7"	"70"	"7027936.05487061"	"HCD"	"MS2"	"18.4455"	"328.0"	"100.000"	"68.3465"	"22300"	"22300"	"22282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"412.5"	""	"467.3"	""	"434.2"	""	"411.4"	""	"664.9"	"731.4"	""	"868"	"42"	"36.000"	"29.000"	"0.00279569461233587"	"28"	"0.0001308"	"0.0002794"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQEHFGK"	"[K].vAQEHFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"458.60175"	"1373.79068"	"1373.79416"	"-2.53"	"-0.00116"	"6/66"	"6"	"66"	"33418718.0738525"	"HCD"	"MS2"	"0"	"780.7"	"51.960"	"28.5559"	"6129"	"6129"	"6126"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1208.1"	""	"1090.4"	""	"1078.0"	""	"1196.2"	"0.8"	"1371.6"	"1446.4"	""	"818"	"33"	"36.000"	"29.000"	"0.0209760306052468"	"24"	"0.0001859"	"0.0003268"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQEHFGK"	"[K].vAQEHFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"458.60208"	"1373.79169"	"1373.79416"	"-1.79"	"-0.00082"	"6/66"	"6"	"66"	"28382998.0911865"	"HCD"	"MS2"	"27.83227"	"702.2"	"50.601"	"28.6206"	"6195"	"6195"	"6193"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1047.5"	""	"979.0"	""	"976.3"	""	"1121.2"	""	"1241.6"	"1285.3"	""	"789"	"32"	"35.000"	"28.000"	"0.0250638052615513"	"27"	"0.0001308"	"0.0002726"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGAGGNK"	"[K].iAEVGAGGNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"687.41150"	"1373.81572"	"1373.81529"	"0.32"	"0.00022"	"15/74"	"15"	"74"	"498487.285949707"	"HCD"	"MS2"	"0"	"47.1"	"100.000"	"32.5576"	"7779"	"7779"	"7750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.7"	""	"62.9"	""	"63.6"	""	"81.3"	"0.4"	"82.0"	"94.8"	""	"730"	"40"	"35.000"	"28.000"	"0.00360821879549783"	""	"0"	"4.345E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"687.41571"	"1373.82414"	"1373.83054"	"-4.66"	"-0.00320"	"4/76"	"4"	"76"	"206529.979858398"	"HCD"	"MS2"	"53.77135"	"18.8"	"100.000"	"83.9490"	"28656"	"28656"	"28628"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.8"	""	"19.5"	""	"30.5"	""	"35.0"	""	"37.4"	"33.0"	""	"610"	"14"	"34.000"	"27.000"	"1.30406680276234"	"20"	"0.001488"	"0.02036"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"458.61404"	"1373.82758"	"1373.83054"	"-2.16"	"-0.00099"	"6/76"	"6"	"76"	"3082117.10095215"	"HCD"	"MS2"	"0"	"158.0"	"100.000"	"42.8154"	"11969"	"11969"	"11939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.6"	""	"195.2"	""	"202.6"	""	"283.6"	""	"312.8"	"324.5"	""	"656"	"22"	"35.000"	"28.000"	"0.185299327738435"	"28"	"0.0003839"	"0.001922"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"687.41766"	"1373.82805"	"1373.83054"	"-1.81"	"-0.00125"	"7/76"	"7"	"76"	"67644646.8503418"	"HCD"	"MS2"	"0"	"2712.9"	"53.693"	"43.5736"	"12274"	"12274"	"12258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3619.8"	""	"3406.9"	""	"3472.3"	""	"5420.3"	""	"4974.5"	"4882.3"	""	"657"	"40"	"35.000"	"28.000"	"0.00294127325483042"	"24"	"0.0001889"	"0.001104"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"458.61420"	"1373.82804"	"1373.83054"	"-1.82"	"-0.00083"	"8/76"	"8"	"76"	"41455050.9560547"	"HCD"	"MS2"	"9.216279"	"1431.0"	"100.000"	"43.3530"	"12135"	"12135"	"12117"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1885.8"	""	"1785.7"	""	"1833.2"	""	"2803.6"	""	"2644.4"	"2621.6"	""	"657"	"26"	"35.000"	"28.000"	"0.0806371878802532"	"20"	"0.0004166"	"0.002206"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"458.61438"	"1373.82859"	"1373.83054"	"-1.42"	"-0.00065"	"9/76"	"9"	"76"	"10586397.7952881"	"HCD"	"MS2"	"5.66054"	"391.9"	"100.000"	"44.5297"	"12664"	"12664"	"12652"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"459.6"	""	"511.1"	""	"519.8"	""	"704.4"	""	"740.4"	"782.7"	""	"666"	"29"	"35.000"	"28.000"	"0.0470375002359377"	"21"	"0.0003146"	"0.001475"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"458.61441"	"1373.82868"	"1373.83054"	"-1.36"	"-0.00062"	"8/76"	"8"	"76"	"85940298.5842285"	"HCD"	"MS2"	"3.291318"	"1560.2"	"48.166"	"43.6146"	"12290"	"12290"	"12273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2012.9"	""	"1969.8"	""	"1960.6"	""	"3035.6"	""	"2975.9"	"2858.2"	""	"661"	"25"	"35.000"	"28.000"	"0.113807652117283"	"19"	"0.0006037"	"0.006023"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"687.41815"	"1373.82903"	"1373.83054"	"-1.10"	"-0.00076"	"8/76"	"8"	"76"	"76063254.1503906"	"HCD"	"MS2"	"0.3180035"	"362.8"	"6.830"	"44.4655"	"12638"	"12638"	"12620"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"438.5"	""	"446.4"	""	"485.7"	""	"655.3"	""	"702.2"	"715.0"	""	"661"	"42"	"35.000"	"28.000"	"0.00191501184169084"	"23"	"0.0001889"	"0.0009234"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"458.61456"	"1373.82914"	"1373.83054"	"-1.02"	"-0.00047"	"9/76"	"9"	"76"	"162669627.416992"	"HCD"	"MS2"	"3.817787"	"385.0"	"6.612"	"43.9467"	"12376"	"12376"	"12358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"452.4"	""	"465.2"	""	"497.0"	""	"705.6"	""	"757.5"	"776.4"	""	"681"	"24"	"35.000"	"28.000"	"0.13744125630547"	"21"	"0.0006037"	"0.005314"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"458.61462"	"1373.82932"	"1373.83054"	"-0.89"	"-0.00041"	"8/76"	"8"	"76"	"12483959.5802002"	"HCD"	"MS2"	"2.250979"	"320.2"	"68.091"	"44.2639"	"12506"	"12506"	"12486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"384.9"	""	"408.3"	"2.5"	"430.9"	""	"547.5"	"4.1"	"637.5"	"622.1"	""	"681"	"27"	"35.000"	"28.000"	"0.0611106799936475"	"23"	"0.0002277"	"0.001282"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"687.41833"	"1373.82939"	"1373.83054"	"-0.84"	"-0.00057"	"13/76"	"13"	"76"	"10398263.4505615"	"HCD"	"MS2"	"7.805584"	"493.9"	"62.914"	"44.7406"	"12750"	"12750"	"12734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"637.1"	""	"620.9"	""	"642.9"	""	"879.9"	"5.5"	"937.3"	"960.4"	""	"681"	"46"	"35.000"	"28.000"	"0.000837755169212267"	"24"	"0.0001889"	"0.0003864"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"687.41833"	"1373.82939"	"1373.83054"	"-0.84"	"-0.00057"	"14/76"	"14"	"76"	"16128961.5679932"	"HCD"	"MS2"	"5.28047"	"665.7"	"57.404"	"42.7489"	"11941"	"11941"	"11923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"819.9"	""	"740.9"	""	"795.3"	""	"1263.1"	"0.6"	"1344.8"	"1355.8"	""	"681"	"52"	"35.000"	"28.000"	"0.000222390953176464"	"24"	"0.0001308"	"0.0003023"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"687.41840"	"1373.82952"	"1373.83054"	"-0.75"	"-0.00051"	"14/76"	"14"	"76"	"15203768.2698364"	"HCD"	"MS2"	"10.24918"	"939.5"	"85.796"	"42.4539"	"11776"	"11776"	"11756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1183.7"	""	"1052.8"	""	"1161.7"	""	"1767.2"	"4.1"	"1878.6"	"1868.3"	""	"681"	"52"	"35.000"	"28.000"	"0.000224966119046587"	"24"	"0.0001889"	"0.0003891"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"458.61472"	"1373.82959"	"1373.83054"	"-0.69"	"-0.00032"	"9/76"	"9"	"76"	"270908877.999023"	"HCD"	"MS2"	"3.633432"	"489.8"	"5.028"	"43.9240"	"12417"	"12417"	"12400"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"598.2"	""	"592.4"	""	"620.6"	""	"928.8"	""	"964.9"	"947.3"	""	"681"	"23"	"35.000"	"28.000"	"0.166003450880203"	"16"	"0.001454"	"0.02019"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"687.41846"	"1373.82964"	"1373.83054"	"-0.66"	"-0.00045"	"13/76"	"13"	"76"	"45652893.8293457"	"HCD"	"MS2"	"0"	"515.0"	"15.935"	"44.2546"	"12503"	"12503"	"12486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"617.2"	""	"643.5"	""	"677.1"	""	"882.4"	""	"1001.1"	"1072.3"	""	"681"	"44"	"35.000"	"28.000"	"0.00126799375979681"	"27"	"0.0001889"	"0.0008647"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"687.41852"	"1373.82976"	"1373.83054"	"-0.57"	"-0.00039"	"7/76"	"7"	"76"	"30693190.4258423"	"HCD"	"MS2"	"0"	"2251.7"	"100.000"	"43.3188"	"12121"	"12121"	"12101"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3091.5"	""	"2825.5"	""	"2900.1"	""	"4501.5"	""	"4066.0"	"3970.1"	""	"681"	"42"	"35.000"	"28.000"	"0.00205644508302658"	"24"	"0.0001889"	"0.0004343"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"458.61478"	"1373.82978"	"1373.83054"	"-0.56"	"-0.00025"	"8/76"	"8"	"76"	"312116950.847656"	"HCD"	"MS2"	"3.987219"	"441.0"	"3.989"	"43.6374"	"12251"	"12251"	"12237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"549.6"	""	"540.2"	""	"562.6"	""	"819.1"	""	"862.6"	"853.9"	""	"681"	"28"	"35.000"	"28.000"	"0.059719631087712"	"23"	"0.0008731"	"0.008966"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"687.41858"	"1373.82988"	"1373.83054"	"-0.48"	"-0.00033"	"13/76"	"13"	"76"	"8355339.33874512"	"HCD"	"MS2"	"8.790747"	"589.7"	"100.000"	"44.5409"	"12618"	"12618"	"12604"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"765.5"	""	"728.5"	""	"761.1"	""	"1046.8"	""	"1136.6"	"1155.6"	""	"669"	"46"	"35.000"	"28.000"	"0.00083252277296546"	"24"	"0.0001859"	"0.0003523"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"458.61496"	"1373.83033"	"1373.83054"	"-0.16"	"-0.00007"	"8/76"	"8"	"76"	"127656189.085449"	"HCD"	"MS2"	"3.955446"	"501.2"	"11.232"	"44.2266"	"12541"	"12541"	"12524"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"583.7"	""	"609.0"	""	"672.2"	""	"875.4"	""	"993.7"	"1029.2"	""	"669"	"28"	"35.000"	"28.000"	"0.0583977510151909"	"20"	"0.0004166"	"0.002266"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.41901"	"1373.83074"	"1373.83054"	"0.14"	"0.00010"	"7/76"	"7"	"76"	"175024.032409668"	"HCD"	"MS2"	"48.58567"	"16.5"	"100.000"	"94.2184"	"32479"	"32479"	"32469"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.2"	""	"18.8"	""	"21.3"	""	"28.3"	""	"36.1"	"35.6"	""	"671"	"9"	"35.000"	"28.000"	"3.9056428286722"	"13"	"0.001286"	"0.01881"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"687.41907"	"1373.83086"	"1373.83054"	"0.23"	"0.00016"	"13/76"	"13"	"76"	"1155335755.28906"	"HCD"	"MS2"	"0.03162847"	"523.9"	"0.643"	"43.8461"	"12385"	"12385"	"12375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"678.1"	""	"586.8"	""	"705.8"	""	"986.5"	"5.1"	"989.5"	"1016.1"	""	"671"	"46"	"35.000"	"28.000"	"0.00075629725567714"	"25"	"0.0007793"	"0.007214"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"687.41913"	"1373.83098"	"1373.83054"	"0.32"	"0.00022"	"13/76"	"13"	"76"	"6602285.06134033"	"HCD"	"MS2"	"1.940266"	"515.1"	"100.000"	"45.0572"	"12878"	"12878"	"12859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"611.5"	""	"585.8"	""	"638.0"	""	"932.7"	""	"1072.2"	"1054.2"	""	"671"	"44"	"35.000"	"28.000"	"0.00143447348303857"	"22"	"0.0001308"	"0.000311"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"687.41931"	"1373.83135"	"1373.83054"	"0.59"	"0.00040"	"8/76"	"8"	"76"	"581168585.5625"	"HCD"	"MS2"	"0"	"561.9"	"1.322"	"43.9423"	"12375"	"12375"	"12358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"698.0"	""	"666.3"	""	"715.0"	""	"1070.0"	"4.1"	"1061.7"	"1114.5"	""	"670"	"41"	"35.000"	"28.000"	"0.00242686046625122"	"24"	"0.0006037"	"0.004917"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"687.41962"	"1373.83196"	"1373.83054"	"1.03"	"0.00071"	"7/76"	"7"	"76"	"1181603165.5"	"HCD"	"MS2"	"0.07807919"	"596.9"	"0.715"	"43.6053"	"12238"	"12238"	"12221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"765.8"	""	"698.9"	""	"742.3"	""	"1141.9"	""	"1156.0"	"1157.8"	""	"650"	"41"	"35.000"	"28.000"	"0.0025637953822603"	"24"	"0.00103"	"0.01304"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"687.41980"	"1373.83232"	"1373.83054"	"1.30"	"0.00089"	"13/76"	"13"	"76"	"6620050.96655273"	"HCD"	"MS2"	"0"	"512.3"	"100.000"	"44.8368"	"12739"	"12739"	"12720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"622.2"	""	"579.1"	""	"610.7"	""	"925.5"	""	"1113.0"	"1019.3"	""	"648"	"45"	"35.000"	"28.000"	"0.000923729918671266"	"23"	"0.0001889"	"0.0003781"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVNGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"687.42065"	"1373.83403"	"1373.83054"	"2.54"	"0.00175"	"13/76"	"13"	"76"	"713409484.738281"	"HCD"	"MS2"	"0"	"722.7"	"1.459"	"44.1487"	"12509"	"12509"	"12492"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"928.3"	""	"829.4"	""	"961.3"	""	"1266.7"	""	"1420.0"	"1451.4"	""	"603"	"46"	"34.000"	"27.000"	"0.000678089963659489"	"25"	"0.0008731"	"0.009613"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"687.42377"	"1373.84026"	"1373.84044"	"-0.13"	"-0.00009"	"12/72"	"12"	"72"	"2164466.1428833"	"HCD"	"MS2"	"6.794546"	"183.1"	"100.000"	"40.6483"	"11084"	"11084"	"11053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.4"	""	"214.7"	""	"239.7"	""	"305.5"	""	"393.8"	"349.7"	""	"650"	"32"	"35.000"	"28.000"	"0.0217712498060371"	"18"	"0.0001889"	"0.0004578"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"687.42407"	"1373.84087"	"1373.84044"	"0.31"	"0.00022"	"7/72"	"7"	"72"	"1975625.62835693"	"HCD"	"MS2"	"0"	"184.8"	"100.000"	"40.4971"	"10978"	"10978"	"10949"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.4"	""	"219.2"	""	"223.1"	""	"305.1"	""	"394.7"	"360.9"	""	"664"	"40"	"35.000"	"28.000"	"0.00356564484897294"	"18"	"0.0001889"	"0.0004578"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVTLNMK"	"[R].iPVTLNMk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"687.43292"	"1373.85857"	"1373.85906"	"-0.36"	"-0.00025"	"6/60"	"6"	"60"	"4488891.53289795"	"HCD"	"MS2"	"18.45372"	"286.0"	"100.000"	"51.5348"	"15465"	"15465"	"15442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"493.6"	""	"433.1"	""	"432.9"	""	"374.0"	""	"483.9"	"487.7"	""	"568"	"35"	"34.000"	"27.000"	"0.00916892330566389"	"15"	"0.0001889"	"0.001065"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVTLNMK"	"[R].iPVTLNMk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"687.43311"	"1373.85893"	"1373.85906"	"-0.09"	"-0.00006"	"6/60"	"6"	"60"	"4286389.61120605"	"HCD"	"MS2"	"52.00638"	"283.9"	"100.000"	"51.7067"	"15586"	"15586"	"15558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"515.2"	""	"408.9"	""	"431.6"	""	"381.2"	"7.5"	"481.9"	"457.1"	""	"520"	"34"	"34.000"	"27.000"	"0.00926772946908235"	"17"	"0.0001889"	"0.0005181"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKPDAAK"	"[K].gkPDAAk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"458.62817"	"1373.86997"	"1373.87196"	"-1.45"	"-0.00066"	"5/58"	"5"	"58"	"29603155.3170166"	"HCD"	"MS2"	"10.20928"	"1778.5"	"78.175"	"24.4744"	"4484"	"4484"	"4464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2808.0"	""	"2735.0"	""	"2827.5"	""	"2958.6"	""	"2761.0"	"2737.3"	""	"526"	"1"	"34.000"	"27.000"	"19.2732852215532"	"13"	"0.0005564"	"0.003595"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKPDAAK"	"[K].gkPDAAk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"687.43884"	"1373.87041"	"1373.87196"	"-1.13"	"-0.00078"	"6/58"	"6"	"58"	"295693.503967285"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"24.5383"	"4511"	"4511"	"4480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.4"	""	"28.9"	""	"35.1"	""	"43.1"	""	"31.5"	"30.6"	""	"517"	"13"	"34.000"	"27.000"	"1.31662030168285"	"14"	"0.00738"	"0.2738"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKPDAAK"	"[K].gkPDAAk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"458.62836"	"1373.87052"	"1373.87196"	"-1.05"	"-0.00048"	"5/58"	"5"	"58"	"30581917.0701294"	"HCD"	"MS2"	"11.25548"	"2129.6"	"81.774"	"24.5103"	"4533"	"4533"	"4515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3346.1"	""	"3320.8"	""	"3407.3"	""	"3627.7"	""	"3262.8"	"3179.0"	""	"517"	"1"	"34.000"	"27.000"	"18.9435141816407"	"13"	"0.0006037"	"0.005019"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISDLGLAVK"	"[R].iSDLGLAVk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62833"	"G protein-coupled receptor kinase 5 OS=Rattus norvegicus OX=10116 GN=Grk5 PE=2 SV=1"	"Q62833"	"G protein-coupled receptor kinase 5 OS=Rattus norvegicus OX=10116 GN=Grk5 PE=2 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"687.44128"	"1373.87529"	"1373.87682"	"-1.11"	"-0.00077"	"14/66"	"14"	"66"	"4268421.07672119"	"HCD"	"MS2"	"26.3287"	"331.0"	"100.000"	"53.0006"	"16115"	"16115"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"418.9"	""	"462.8"	""	"482.4"	""	"550.1"	"4.0"	"619.5"	"599.0"	""	"521"	"16"	"34.000"	"27.000"	"0.584531241145411"	"25"	"0.0001889"	"0.0008744"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISDLGLAVK"	"[R].iSDLGLAVk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62833"	"G protein-coupled receptor kinase 5 OS=Rattus norvegicus OX=10116 GN=Grk5 PE=2 SV=1"	"Q62833"	"G protein-coupled receptor kinase 5 OS=Rattus norvegicus OX=10116 GN=Grk5 PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"687.44159"	"1373.87590"	"1373.87682"	"-0.67"	"-0.00046"	"13/66"	"13"	"66"	"4148649.64868164"	"HCD"	"MS2"	"19.39777"	"334.7"	"100.000"	"52.7930"	"15980"	"15980"	"15954"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"414.1"	"3.3"	"467.6"	""	"459.7"	""	"553.4"	"4.7"	"619.5"	"651.3"	""	"522"	"20"	"34.000"	"27.000"	"0.256826898603656"	"25"	"0.0001889"	"0.0003756"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLTDIGIR"	"[K].kLTDIGIR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"1"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"687.44678"	"1373.88628"	"1373.88806"	"-1.29"	"-0.00089"	"7/72"	"7"	"72"	"1309843.28759766"	"HCD"	"MS2"	"18.01409"	"93.2"	"100.000"	"36.4412"	"9317"	"9317"	"9290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.9"	""	"142.4"	""	"143.5"	""	"132.0"	""	"143.1"	"150.8"	""	"393"	"32"	"32.000"	"25.000"	"0.0115707778277373"	"21"	"0.000523"	"0.002963"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLTDIGIR"	"[K].kLTDIGIR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"458.63367"	"1373.88645"	"1373.88806"	"-1.17"	"-0.00054"	"7/72"	"7"	"72"	"43124180.6405029"	"HCD"	"MS2"	"47.14878"	"749.5"	"29.167"	"36.3771"	"9291"	"9291"	"9274"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1421.1"	""	"1212.4"	""	"1174.6"	""	"950.8"	"3.4"	"1153.7"	"1159.6"	""	"393"	"12"	"32.000"	"25.000"	"1.22000765226207"	"13"	"0.0004166"	"0.002399"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLTDIGIR"	"[K].kLTDIGIR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"458.63385"	"1373.88700"	"1373.88806"	"-0.77"	"-0.00035"	"7/72"	"7"	"72"	"45497978.5803223"	"HCD"	"MS2"	"41.97157"	"579.9"	"21.275"	"36.4642"	"9370"	"9370"	"9353"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1112.3"	""	"928.4"	""	"926.3"	""	"726.5"	""	"870.7"	"911.4"	""	"391"	"13"	"32.000"	"25.000"	"0.998037274951919"	"13"	"0.000523"	"0.003253"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLTDIGIR"	"[K].kLTDIGIR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"1"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"687.44727"	"1373.88725"	"1373.88806"	"-0.58"	"-0.00040"	"7/72"	"7"	"72"	"2171245.24926758"	"HCD"	"MS2"	"0"	"133.3"	"100.000"	"36.4846"	"9378"	"9378"	"9353"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.0"	""	"186.4"	""	"218.5"	""	"172.3"	""	"214.9"	"222.0"	""	"392"	"27"	"32.000"	"25.000"	"0.0360791312287915"	"21"	"0.0008731"	"0.009048"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CQYVTEK"	"[R].cQYVTEk.[V]"	"N-Term(TMT6plex); C1(Methylthio); K7(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.0800"	"0.0000"	"1"	"1"	"1"	"687.86102"	"1374.71477"	"1374.71616"	"-1.02"	"-0.00070"	"6/60"	"6"	"60"	"3386815.16522217"	"HCD"	"MS2"	"0"	"313.7"	"100.000"	"38.3892"	"10160"	"10160"	"10129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"504.0"	""	"391.9"	""	"459.4"	""	"473.5"	"3.3"	"516.2"	"620.6"	""	"711"	"25"	"35.000"	"28.000"	"0.103238005366211"	""	"0.000494"	"0.002639"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"687.90790"	"1374.80852"	"1374.81456"	"-4.39"	"-0.00302"	"10/76"	"10"	"76"	"275259.537780762"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"83.9370"	"28702"	"28702"	"28677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.4"	""	"30.0"	""	"35.2"	""	"45.6"	"3.2"	"49.3"	"43.4"	""	"892"	"29"	"36.000"	"29.000"	"0.0596121600379713"	"24"	"0.0001889"	"0.001028"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"687.90814"	"1374.80901"	"1374.81456"	"-4.04"	"-0.00277"	"9/76"	"9"	"76"	"161432.024230957"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"99.4644"	"34019"	"34019"	"34013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.6"	""	"11.0"	""	"13.2"	""	"18.3"	""	"25.2"	"26.6"	""	"891"	"34"	"36.000"	"29.000"	"0.0174923318720522"	"22"	"0.0001889"	"0.0007761"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"687.90814"	"1374.80901"	"1374.81456"	"-4.04"	"-0.00277"	"9/76"	"9"	"76"	"208338.694030762"	"HCD"	"MS2"	"24.38337"	"11.3"	"100.000"	"95.6344"	"32911"	"32911"	"32907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.9"	""	"8.3"	""	"17.5"	""	"19.9"	""	"25.6"	"22.6"	""	"891"	"21"	"36.000"	"29.000"	"0.396139098005716"	"20"	"0.000523"	"0.003269"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"687.90833"	"1374.80937"	"1374.81456"	"-3.77"	"-0.00259"	"14/76"	"14"	"76"	"3846168.137146"	"HCD"	"MS2"	"0"	"305.0"	"100.000"	"50.1387"	"14946"	"14946"	"14932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"319.9"	""	"297.6"	""	"348.5"	""	"511.1"	"2.3"	"795.5"	"630.1"	""	"882"	"49"	"36.000"	"29.000"	"0.000611559320532503"	"27"	"0"	"0.0001667"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"687.90839"	"1374.80950"	"1374.81456"	"-3.68"	"-0.00253"	"10/76"	"10"	"76"	"216895.051940918"	"HCD"	"MS2"	"56.4048"	"18.1"	"100.000"	"88.2278"	"30415"	"30415"	"30405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.2"	""	"21.2"	""	"19.2"	""	"36.5"	""	"39.0"	"37.4"	""	"882"	"13"	"36.000"	"29.000"	"2.00188252942739"	"17"	"0.0004557"	"0.002635"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"687.90845"	"1374.80962"	"1374.81456"	"-3.59"	"-0.00247"	"14/76"	"14"	"76"	"3404263.4329834"	"HCD"	"MS2"	"45.41253"	"246.3"	"100.000"	"51.5891"	"15538"	"15538"	"15510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.7"	""	"296.7"	""	"331.9"	""	"465.4"	"0.4"	"473.9"	"477.9"	""	"884"	"31"	"36.000"	"29.000"	"0.0316535387314103"	"27"	"0.0001308"	"0.0002956"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"687.90851"	"1374.80974"	"1374.81456"	"-3.50"	"-0.00241"	"10/76"	"10"	"76"	"123976.863647461"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"113.2030"	"36603"	"36603"	"36600"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.2"	""	"7.4"	""	"10.6"	""	"14.5"	""	"19.3"	"18.0"	""	"884"	"31"	"36.000"	"29.000"	"0.0326905531575741"	"19"	"0.0001889"	"0.000775"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"687.90851"	"1374.80974"	"1374.81456"	"-3.50"	"-0.00241"	"10/76"	"10"	"76"	"225400.584228516"	"HCD"	"MS2"	"13.7758"	"21.4"	"100.000"	"84.2303"	"28771"	"28771"	"28740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.8"	""	"25.6"	""	"25.3"	""	"42.4"	""	"40.3"	"41.0"	""	"884"	"32"	"36.000"	"29.000"	"0.0265107655704935"	"26"	"0.0001889"	"0.0005566"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"687.90857"	"1374.80986"	"1374.81456"	"-3.42"	"-0.00235"	"13/76"	"13"	"76"	"1484381.1328125"	"HCD"	"MS2"	"0"	"133.1"	"100.000"	"54.2060"	"16537"	"16537"	"16509"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.7"	""	"153.0"	""	"151.9"	""	"241.8"	"2.7"	"275.1"	"269.3"	""	"884"	"43"	"36.000"	"29.000"	"0.00200180730317401"	"23"	"0"	"0.0001148"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"687.90863"	"1374.80998"	"1374.81456"	"-3.33"	"-0.00229"	"11/76"	"11"	"76"	"124401.825500488"	"HCD"	"MS2"	"10.97488"	"11.1"	"100.000"	"93.3613"	"32183"	"32183"	"32176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.4"	""	"10.8"	""	"14.5"	""	"21.8"	""	"22.1"	"23.5"	""	"884"	"42"	"36.000"	"29.000"	"0.00257289622254725"	"25"	"0.0001889"	"0.0003828"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"687.90863"	"1374.80998"	"1374.81456"	"-3.33"	"-0.00229"	"10/76"	"10"	"76"	"186709.262451172"	"HCD"	"MS2"	"55.4481"	"15.8"	"100.000"	"94.5052"	"32595"	"32595"	"32590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.0"	""	"18.3"	""	"23.1"	""	"24.9"	""	"37.9"	"30.2"	""	"884"	"33"	"36.000"	"29.000"	"0.0237368053995652"	"26"	"0.0002277"	"0.001172"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"687.90869"	"1374.81011"	"1374.81456"	"-3.24"	"-0.00223"	"10/76"	"10"	"76"	"124691.00012207"	"HCD"	"MS2"	"8.476435"	"10.2"	"100.000"	"102.2312"	"34678"	"34678"	"34675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"11.9"	""	"10.9"	""	"20.3"	""	"20.8"	"20.4"	""	"884"	"28"	"36.000"	"29.000"	"0.0646282311109869"	"21"	"0.0003839"	"0.00184"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"687.90869"	"1374.81011"	"1374.81456"	"-3.24"	"-0.00223"	"9/76"	"9"	"76"	"194811.588317871"	"HCD"	"MS2"	"12.02942"	"11.3"	"100.000"	"93.4252"	"32233"	"32233"	"32228"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"17.2"	""	"13.7"	""	"19.1"	""	"23.2"	"23.8"	""	"884"	"24"	"36.000"	"29.000"	"0.179234772668186"	"24"	"0.0006037"	"0.00476"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"687.90875"	"1374.81023"	"1374.81456"	"-3.15"	"-0.00216"	"9/76"	"9"	"76"	"118640.413696289"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"106.5842"	"35509"	"35509"	"35507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"10.3"	""	"8.2"	""	"22.7"	""	"17.1"	"17.7"	""	"884"	"30"	"36.000"	"29.000"	"0.046070430379184"	"24"	"0.0003839"	"0.001702"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"687.90875"	"1374.81023"	"1374.81456"	"-3.15"	"-0.00216"	"9/76"	"9"	"76"	"144350.343017578"	"HCD"	"MS2"	"9.532419"	"11.6"	"100.000"	"91.8904"	"31727"	"31727"	"31721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.0"	""	"12.4"	""	"11.3"	""	"25.3"	""	"20.6"	"28.3"	""	"884"	"27"	"36.000"	"29.000"	"0.0973693496669628"	"19"	"0.0003839"	"0.001603"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90881"	"1374.81035"	"1374.81456"	"-3.06"	"-0.00210"	"5/76"	"5"	"76"	"124547.814025879"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"115.0984"	"36918"	"36918"	"36916"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"8.9"	""	"11.8"	""	"20.7"	""	"15.7"	"10.0"	""	"884"	"29"	"36.000"	"29.000"	"0.0512179591420566"	"14"	"0.0003839"	"0.001702"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"687.90881"	"1374.81035"	"1374.81456"	"-3.06"	"-0.00210"	"9/76"	"9"	"76"	"163942.647644043"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"119.1873"	"37619"	"37619"	"37616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.8"	""	"14.6"	""	"11.0"	""	"24.7"	""	"26.4"	"20.3"	""	"884"	"16"	"36.000"	"29.000"	"1.15457531864445"	"14"	"0.0004166"	"0.002315"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"687.90881"	"1374.81035"	"1374.81456"	"-3.06"	"-0.00210"	"10/76"	"10"	"76"	"189411.508789063"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"101.8510"	"34587"	"34587"	"34583"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.7"	""	"9.7"	""	"16.0"	""	"20.8"	""	"25.5"	"25.2"	""	"884"	"28"	"36.000"	"29.000"	"0.0667455428140554"	"20"	"0.0001889"	"0.001025"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"687.90881"	"1374.81035"	"1374.81456"	"-3.06"	"-0.00210"	"14/76"	"14"	"76"	"3844749.88818359"	"HCD"	"MS2"	"0"	"281.0"	"100.000"	"49.8547"	"14784"	"14784"	"14762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"286.6"	"2.3"	"264.0"	""	"312.3"	""	"438.3"	"0.0"	"793.1"	"583.4"	""	"884"	"49"	"36.000"	"29.000"	"0.000620043657416385"	"26"	"0"	"0.0001612"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"687.90887"	"1374.81047"	"1374.81456"	"-2.97"	"-0.00204"	"10/76"	"10"	"76"	"123574.597717285"	"HCD"	"MS2"	"8.642968"	"10.5"	"100.000"	"100.0497"	"34167"	"34167"	"34163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"7.1"	""	"14.2"	""	"20.7"	""	"23.4"	"25.0"	""	"885"	"37"	"36.000"	"29.000"	"0.00852929774086989"	"22"	"0.0001889"	"0.0005812"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"687.90887"	"1374.81047"	"1374.81456"	"-2.97"	"-0.00204"	"10/76"	"10"	"76"	"114763.765563965"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"115.0455"	"36890"	"36890"	"36888"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.4"	""	"11.1"	""	"9.8"	""	"16.7"	""	"21.2"	"19.2"	""	"885"	"38"	"36.000"	"29.000"	"0.00688514791985245"	"23"	"0.000523"	"0.002789"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"687.90887"	"1374.81047"	"1374.81456"	"-2.97"	"-0.00204"	"10/76"	"10"	"76"	"150571.859619141"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"104.7299"	"35188"	"35188"	"35185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.3"	""	"8.2"	""	"13.1"	""	"19.8"	""	"17.9"	"21.2"	""	"885"	"33"	"36.000"	"29.000"	"0.0241497853532887"	"22"	"0.0001889"	"0.001019"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"687.90894"	"1374.81059"	"1374.81456"	"-2.88"	"-0.00198"	"8/76"	"8"	"76"	"107768.248535156"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"94.0848"	"32446"	"32446"	"32432"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"14.0"	""	"12.5"	""	"18.5"	""	"23.2"	"19.1"	""	"879"	"20"	"36.000"	"29.000"	"0.432472880982018"	"22"	"0.0006037"	"0.003741"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"687.90894"	"1374.81059"	"1374.81456"	"-2.88"	"-0.00198"	"9/76"	"9"	"76"	"119405.836914063"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"108.7057"	"35885"	"35885"	"35883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.7"	""	"9.2"	""	"13.9"	""	"17.9"	""	"14.9"	"20.6"	""	"879"	"26"	"36.000"	"29.000"	"0.10045206740835"	"17"	"0.0002723"	"0.001395"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90894"	"1374.81059"	"1374.81456"	"-2.88"	"-0.00198"	"9/76"	"9"	"76"	"164140.260375977"	"HCD"	"MS2"	"9.693151"	"10.0"	"100.000"	"117.5248"	"37330"	"37330"	"37328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.0"	""	"11.6"	""	"12.8"	""	"20.4"	""	"21.8"	"19.1"	""	"879"	"23"	"36.000"	"29.000"	"0.216251375931998"	"14"	"0.0002277"	"0.001161"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"687.90894"	"1374.81059"	"1374.81456"	"-2.88"	"-0.00198"	"9/76"	"9"	"76"	"230463.077453613"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"98.1437"	"33650"	"33650"	"33644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.2"	""	"13.2"	""	"11.7"	""	"21.3"	""	"20.4"	"26.6"	""	"879"	"27"	"36.000"	"29.000"	"0.0885031807814519"	"20"	"0.0004166"	"0.002186"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"687.90894"	"1374.81059"	"1374.81456"	"-2.88"	"-0.00198"	"7/76"	"7"	"76"	"3595135.9274292"	"HCD"	"MS2"	"27.09584"	"255.4"	"100.000"	"51.4331"	"15424"	"15424"	"15394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"346.5"	""	"303.0"	""	"350.3"	""	"446.7"	"1.7"	"498.0"	"475.0"	""	"879"	"25"	"36.000"	"29.000"	"0.137391188185098"	"25"	"0.0001308"	"0.0002818"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"687.90900"	"1374.81072"	"1374.81456"	"-2.79"	"-0.00192"	"9/76"	"9"	"76"	"118655.629089355"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"114.5296"	"36809"	"36809"	"36807"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.5"	""	"7.9"	""	"11.7"	""	"14.7"	""	"20.0"	"16.9"	""	"879"	"18"	"36.000"	"29.000"	"0.774388472397911"	"20"	"0.000523"	"0.002994"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"687.90906"	"1374.81084"	"1374.81456"	"-2.70"	"-0.00186"	"10/76"	"10"	"76"	"129053.02355957"	"HCD"	"MS2"	"17.10132"	"9.5"	"100.000"	"105.3315"	"35287"	"35287"	"35284"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"10.7"	""	"9.4"	""	"17.3"	""	"23.0"	"20.2"	""	"879"	"31"	"36.000"	"29.000"	"0.0350718665054275"	"19"	"0.0001889"	"0.0007324"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"687.90906"	"1374.81084"	"1374.81456"	"-2.70"	"-0.00186"	"6/76"	"6"	"76"	"240902.044433594"	"HCD"	"MS2"	"21.01559"	"11.9"	"100.000"	"95.6894"	"32946"	"32946"	"32942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.5"	""	"14.8"	""	"15.6"	""	"20.1"	""	"24.6"	"26.3"	""	"879"	"27"	"36.000"	"29.000"	"0.0895279993151662"	"21"	"0.0001889"	"0.000466"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"687.90912"	"1374.81096"	"1374.81456"	"-2.62"	"-0.00180"	"10/76"	"10"	"76"	"127728.779846191"	"HCD"	"MS2"	"6.122389"	"9.2"	"100.000"	"111.9151"	"36407"	"36407"	"36405"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"6.3"	""	"13.6"	""	"17.4"	""	"20.3"	"20.4"	""	"879"	"24"	"36.000"	"29.000"	"0.188347074714675"	"17"	"0.0001889"	"0.0009726"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"687.90912"	"1374.81096"	"1374.81456"	"-2.62"	"-0.00180"	"7/76"	"7"	"76"	"193556.21081543"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"100.7490"	"34348"	"34348"	"34341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.7"	""	"6.4"	""	"13.4"	""	"19.2"	""	"22.6"	"22.0"	""	"879"	"16"	"36.000"	"29.000"	"1.00915733084538"	"22"	"0.001587"	"0.02116"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"687.90912"	"1374.81096"	"1374.81456"	"-2.62"	"-0.00180"	"9/76"	"9"	"76"	"167730.544311523"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"104.5188"	"35151"	"35151"	"35148"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.9"	""	"8.8"	""	"12.0"	""	"18.5"	""	"18.2"	"20.9"	""	"879"	"24"	"36.000"	"29.000"	"0.1678645070342"	"18"	"0.0003839"	"0.00172"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90918"	"1374.81108"	"1374.81456"	"-2.53"	"-0.00174"	"9/76"	"9"	"76"	"121646.13067627"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"111.1329"	"36285"	"36285"	"36283"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.8"	""	"9.1"	""	"7.9"	""	"21.4"	""	"22.6"	"16.5"	""	"879"	"24"	"36.000"	"29.000"	"0.158474313608012"	"14"	"0.0001889"	"0.0008527"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"687.90918"	"1374.81108"	"1374.81456"	"-2.53"	"-0.00174"	"9/76"	"9"	"76"	"127499.63067627"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"111.3936"	"36326"	"36326"	"36323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"7.6"	""	"11.2"	""	"18.8"	""	"20.6"	"19.6"	""	"879"	"22"	"36.000"	"29.000"	"0.265435422610919"	"20"	"0.0004166"	"0.002416"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90918"	"1374.81108"	"1374.81456"	"-2.53"	"-0.00174"	"11/76"	"11"	"76"	"142328.619873047"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"102.9375"	"34826"	"34826"	"34823"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"10.4"	""	"9.8"	""	"24.9"	"1.5"	"21.7"	"19.4"	""	"879"	"25"	"36.000"	"29.000"	"0.150299964984775"	"14"	"0.0001889"	"0.0008577"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"687.90918"	"1374.81108"	"1374.81456"	"-2.53"	"-0.00174"	"8/76"	"8"	"76"	"125937.963806152"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"99.2113"	"33949"	"33949"	"33946"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"9.9"	""	"14.9"	""	"17.8"	""	"20.0"	"23.2"	""	"879"	"11"	"36.000"	"29.000"	"3.1474502878857"	"15"	"0.0006737"	"0.006692"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"687.90918"	"1374.81108"	"1374.81456"	"-2.53"	"-0.00174"	"8/76"	"8"	"76"	"117265.301696777"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"111.6635"	"36368"	"36368"	"36366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.7"	""	"6.1"	""	"11.7"	""	"14.5"	""	"15.2"	"15.2"	""	"879"	"16"	"36.000"	"29.000"	"1.06159503673855"	"19"	"0.0006737"	"0.006607"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90918"	"1374.81108"	"1374.81456"	"-2.53"	"-0.00174"	"9/76"	"9"	"76"	"146946.522949219"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"100.5586"	"34286"	"34286"	"34283"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.8"	""	"11.0"	""	"11.9"	""	"26.4"	""	"21.5"	"18.4"	""	"879"	"14"	"36.000"	"29.000"	"1.76994136586039"	"13"	"0.0005564"	"0.003305"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"687.90918"	"1374.81108"	"1374.81456"	"-2.53"	"-0.00174"	"9/76"	"9"	"76"	"160890.906311035"	"HCD"	"MS2"	"10.21033"	"11.4"	"100.000"	"98.2821"	"33687"	"33687"	"33682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"14.9"	""	"16.0"	""	"18.3"	""	"21.9"	"23.9"	""	"879"	"23"	"36.000"	"29.000"	"0.222309938950368"	"15"	"0.0002277"	"0.001234"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"687.90918"	"1374.81108"	"1374.81456"	"-2.53"	"-0.00174"	"10/76"	"10"	"76"	"192845.168151855"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"103.0621"	"34846"	"34846"	"34842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.2"	""	"13.1"	""	"10.8"	""	"25.9"	""	"23.7"	"16.2"	""	"879"	"36"	"36.000"	"29.000"	"0.0108632276173459"	"19"	"0.0001889"	"0.000597"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90924"	"1374.81120"	"1374.81456"	"-2.44"	"-0.00168"	"9/76"	"9"	"76"	"122731.717407227"	"HCD"	"MS2"	"10.76145"	"8.8"	"100.000"	"112.6456"	"36518"	"36518"	"36516"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"8.5"	""	"10.6"	""	"17.5"	""	"22.4"	"14.6"	""	"868"	"18"	"36.000"	"29.000"	"0.673735962321808"	"14"	"0.000494"	"0.002732"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.90924"	"1374.81120"	"1374.81456"	"-2.44"	"-0.00168"	"9/76"	"9"	"76"	"247262.028320313"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"84.2135"	"28815"	"28815"	"28785"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.9"	""	"19.4"	""	"25.6"	""	"35.7"	"0.8"	"50.1"	"44.4"	""	"868"	"25"	"36.000"	"29.000"	"0.149447869951289"	"19"	"0.000523"	"0.002768"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90924"	"1374.81120"	"1374.81456"	"-2.44"	"-0.00168"	"11/76"	"11"	"76"	"172645.664978027"	"HCD"	"MS2"	"8.276097"	"10.7"	"100.000"	"118.8591"	"37543"	"37543"	"37541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.0"	""	"12.7"	""	"10.6"	""	"17.7"	""	"29.8"	"18.4"	""	"868"	"20"	"36.000"	"29.000"	"0.478068060340974"	"14"	"0.0003839"	"0.001602"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"687.90924"	"1374.81120"	"1374.81456"	"-2.44"	"-0.00168"	"9/76"	"9"	"76"	"195520.500427246"	"HCD"	"MS2"	"18.68991"	"7.0"	"100.000"	"114.2753"	"36767"	"36767"	"36762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"8.3"	""	"7.1"	""	"13.6"	""	"18.0"	"12.7"	""	"868"	"26"	"36.000"	"29.000"	"0.0982855629495389"	"22"	"0.0005564"	"0.003458"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"10/76"	"10"	"76"	"135674.170288086"	"HCD"	"MS2"	"6.810637"	"11.7"	"100.000"	"98.7879"	"33831"	"33831"	"33827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.7"	""	"10.1"	""	"15.9"	""	"23.3"	""	"26.1"	"25.3"	""	"865"	"34"	"36.000"	"29.000"	"0.0187493454902606"	"19"	"0.0001889"	"0.0006714"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"6/76"	"6"	"76"	"111519.105651855"	"HCD"	"MS2"	"6.384111"	"9.5"	"100.000"	"109.2552"	"35975"	"35975"	"35972"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.2"	""	"10.0"	""	"10.7"	""	"18.3"	""	"21.1"	"21.5"	""	"865"	"14"	"36.000"	"29.000"	"1.84920948260561"	"21"	"0.0009404"	"0.01009"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"9/76"	"9"	"76"	"134185.561645508"	"HCD"	"MS2"	"7.010222"	"10.1"	"100.000"	"110.8655"	"36243"	"36243"	"36241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.2"	""	"10.5"	""	"10.1"	""	"19.0"	""	"22.3"	"23.0"	""	"865"	"23"	"36.000"	"29.000"	"0.200440792785945"	"17"	"0.0001889"	"0.0006093"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"4/76"	"4"	"76"	"139158.076477051"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"104.1721"	"35079"	"35079"	"35076"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.1"	""	"11.4"	""	"11.8"	""	"19.4"	""	"17.7"	"17.9"	""	"865"	"16"	"36.000"	"29.000"	"1.15607527174688"	"13"	"0.0003839"	"0.001902"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"5/76"	"5"	"76"	"142890.212646484"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"89.1578"	"30758"	"30758"	"30752"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.7"	""	"13.6"	""	"17.1"	""	"23.3"	""	"27.7"	"24.4"	""	"865"	"25"	"36.000"	"29.000"	"0.137083792776631"	"24"	"0.0003839"	"0.001993"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"10/76"	"10"	"76"	"161656.543823242"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"119.1157"	"37592"	"37592"	"37590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.7"	""	"10.1"	""	"11.2"	""	"20.8"	""	"24.8"	"21.7"	""	"865"	"30"	"36.000"	"29.000"	"0.0422655098063388"	"17"	"0.0002277"	"0.001284"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"8/76"	"8"	"76"	"160623.816101074"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"103.7243"	"35000"	"35000"	"34997"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.3"	""	"10.1"	""	"10.7"	""	"20.6"	""	"20.0"	"22.6"	""	"865"	"21"	"36.000"	"29.000"	"0.334954727549589"	"17"	"0.0008453"	"0.008344"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"9/76"	"9"	"76"	"156922.913513184"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"96.7541"	"33242"	"33242"	"33238"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.2"	""	"11.6"	""	"15.0"	""	"24.5"	""	"26.3"	"24.6"	""	"865"	"22"	"36.000"	"29.000"	"0.268525857304503"	"20"	"0.0001889"	"0.001088"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"6/76"	"6"	"76"	"171088.215209961"	"HCD"	"MS2"	"7.237298"	"9.7"	"100.000"	"115.7009"	"37022"	"37022"	"37018"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.3"	""	"9.4"	""	"8.2"	""	"19.4"	""	"18.8"	"22.2"	""	"865"	"17"	"36.000"	"29.000"	"0.933224456958529"	"14"	"0.0004166"	"0.002443"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"9/76"	"9"	"76"	"147883.101623535"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"116.0311"	"37064"	"37064"	"37062"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.6"	""	"9.5"	""	"10.7"	""	"17.0"	""	"20.6"	"16.3"	""	"865"	"21"	"36.000"	"29.000"	"0.32209657871434"	"16"	"0.0005564"	"0.003492"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"687.90930"	"1374.81133"	"1374.81456"	"-2.35"	"-0.00162"	"10/76"	"10"	"76"	"167365.787353516"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"103.8891"	"35025"	"35025"	"35022"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"9.8"	""	"9.3"	""	"22.0"	""	"20.5"	"19.9"	""	"865"	"38"	"36.000"	"29.000"	"0.00682316874144968"	"21"	"0.0001889"	"0.0007304"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"6/76"	"6"	"76"	"106506.978393555"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"114.8431"	"36877"	"36877"	"36875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.5"	""	"9.4"	""	"7.3"	""	"19.5"	""	"11.2"	"17.1"	""	"863"	"29"	"36.000"	"29.000"	"0.055716111656424"	"18"	"0.0001889"	"0.0005141"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"9/76"	"9"	"76"	"109168.425842285"	"HCD"	"MS2"	"5.234552"	"8.1"	"100.000"	"113.7859"	"36705"	"36705"	"36703"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"7.6"	""	"13.6"	""	"15.3"	""	"17.8"	"12.3"	""	"863"	"19"	"36.000"	"29.000"	"0.528421889982868"	"14"	"0.000523"	"0.002837"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"5/76"	"5"	"76"	"126907.756469727"	"HCD"	"MS2"	"32.31012"	"10.2"	"100.000"	"88.8392"	"30649"	"30649"	"30636"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.8"	""	"14.1"	""	"11.4"	""	"22.2"	""	"20.8"	"17.8"	""	"863"	"20"	"36.000"	"29.000"	"0.401773048264369"	"18"	"0.0003839"	"0.001838"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"9/76"	"9"	"76"	"132342.354980469"	"HCD"	"MS2"	"8.408295"	"11.6"	"100.000"	"96.9896"	"33321"	"33321"	"33315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.8"	""	"13.6"	""	"16.0"	""	"20.7"	""	"22.3"	"26.6"	""	"863"	"28"	"36.000"	"29.000"	"0.0657628763263531"	"20"	"0.0002277"	"0.001165"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"5/76"	"5"	"76"	"142182.038208008"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"98.5936"	"33774"	"33774"	"33771"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.4"	""	"10.6"	""	"16.2"	""	"20.4"	"1.3"	"22.6"	"24.2"	""	"863"	"26"	"36.000"	"29.000"	"0.112196885150581"	"24"	"0.0008731"	"0.008407"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"11/76"	"11"	"76"	"161476.35144043"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"104.7770"	"35199"	"35199"	"35194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.1"	""	"9.6"	""	"14.4"	""	"21.1"	""	"25.3"	"23.6"	""	"863"	"36"	"36.000"	"29.000"	"0.0105434028348745"	"23"	"0.0001889"	"0.0009045"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"8/76"	"8"	"76"	"158668.144287109"	"HCD"	"MS2"	"8.485043"	"9.6"	"100.000"	"109.5092"	"36017"	"36017"	"36014"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"8.6"	""	"13.3"	""	"18.9"	""	"22.6"	"20.0"	""	"863"	"22"	"36.000"	"29.000"	"0.28574642134731"	"19"	"0.0004166"	"0.00225"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"8/76"	"8"	"76"	"145139.369934082"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"116.4756"	"37153"	"37153"	"37151"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"10.7"	""	"8.8"	""	"20.3"	""	"24.3"	"23.7"	""	"863"	"17"	"36.000"	"29.000"	"0.883040860746697"	"14"	"0.00103"	"0.01117"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"11/76"	"11"	"76"	"160955.849609375"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"103.4667"	"34940"	"34940"	"34935"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.2"	""	"7.3"	""	"12.8"	""	"20.1"	""	"17.6"	"23.2"	""	"863"	"38"	"36.000"	"29.000"	"0.00729425262004069"	"20"	"0.0001889"	"0.0004754"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"9/76"	"9"	"76"	"155178.356262207"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"118.0916"	"37413"	"37413"	"37411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"8.4"	""	"12.0"	""	"15.4"	""	"19.0"	"12.3"	""	"863"	"20"	"36.000"	"29.000"	"0.421677860842432"	"14"	"0.000523"	"0.003002"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"10/76"	"10"	"76"	"167603.655334473"	"HCD"	"MS2"	"43.40316"	"11.3"	"100.000"	"93.0212"	"32078"	"32078"	"32072"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"12.5"	""	"13.6"	""	"27.9"	""	"21.3"	"22.2"	""	"863"	"26"	"36.000"	"29.000"	"0.103748254820299"	"14"	"0.0001889"	"0.0009589"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"12/76"	"12"	"76"	"267834.301269531"	"HCD"	"MS2"	"35.13211"	"23.1"	"100.000"	"83.8638"	"28621"	"28621"	"28596"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.0"	""	"26.4"	""	"30.7"	""	"43.7"	""	"45.7"	"46.4"	""	"863"	"45"	"36.000"	"29.000"	"0.00135512950140759"	"27"	"7.476E-05"	"0.0001989"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"5/76"	"5"	"76"	"186182.428710938"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"115.7742"	"37017"	"37017"	"37015"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"9.2"	""	"14.2"	""	"20.4"	""	"18.9"	"18.4"	""	"863"	"21"	"36.000"	"29.000"	"0.374956425237039"	"14"	"0.0003839"	"0.001829"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"10/76"	"10"	"76"	"185989.841674805"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"102.1398"	"34651"	"34651"	"34647"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.2"	""	"14.7"	""	"11.9"	""	"22.6"	""	"19.1"	"25.8"	""	"863"	"30"	"36.000"	"29.000"	"0.0450796774593775"	"20"	"0.0002277"	"0.001312"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"687.90936"	"1374.81145"	"1374.81456"	"-2.26"	"-0.00155"	"9/76"	"9"	"76"	"190453.160339355"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"97.0537"	"33331"	"33331"	"33324"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.2"	""	"8.7"	""	"13.2"	""	"19.8"	""	"21.7"	"27.7"	""	"863"	"27"	"36.000"	"29.000"	"0.0922530641620213"	"19"	"0.0003571"	"0.001491"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"9/76"	"9"	"76"	"117698.237731934"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"95.9701"	"33009"	"33009"	"33004"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"12.6"	""	"14.0"	""	"17.2"	""	"21.9"	"23.3"	""	"863"	"25"	"36.000"	"29.000"	"0.12675958248214"	"19"	"0.0003146"	"0.001464"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"9/76"	"9"	"76"	"125208.897399902"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"106.0747"	"35415"	"35415"	"35413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.4"	""	"9.4"	""	"10.6"	""	"17.6"	""	"17.5"	"19.1"	""	"863"	"24"	"36.000"	"29.000"	"0.169426289624927"	"19"	"0.0002723"	"0.00138"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"10/76"	"10"	"76"	"104935.81628418"	"HCD"	"MS2"	"8.591228"	"7.3"	"100.000"	"112.9018"	"36557"	"36557"	"36555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.1"	""	"8.5"	""	"9.6"	""	"12.9"	""	"12.8"	"18.4"	""	"863"	"26"	"36.000"	"29.000"	"0.115606113215941"	"14"	"0.0001889"	"0.0005863"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"9/76"	"9"	"76"	"132421.401184082"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"101.0044"	"34410"	"34410"	"34408"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.0"	""	"9.3"	""	"9.9"	""	"19.1"	""	"22.1"	"21.7"	""	"863"	"20"	"36.000"	"29.000"	"0.440535387219864"	"20"	"0.0003146"	"0.001433"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"11/76"	"11"	"76"	"134287.133239746"	"HCD"	"MS2"	"7.188028"	"10.1"	"100.000"	"96.2091"	"33089"	"33089"	"33083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.6"	""	"10.3"	""	"11.1"	""	"18.8"	""	"23.9"	"21.9"	""	"863"	"32"	"36.000"	"29.000"	"0.0246593031723911"	"18"	"0.0001859"	"0.0003586"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"9/76"	"9"	"76"	"136681.906677246"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"108.9472"	"35920"	"35920"	"35917"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.2"	""	"8.8"	""	"10.4"	""	"18.2"	""	"19.1"	"18.0"	""	"863"	"23"	"36.000"	"29.000"	"0.240425650664128"	"16"	"0.0007076"	"0.006896"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"9/76"	"9"	"76"	"141629.237915039"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"97.3830"	"33430"	"33430"	"33422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.7"	""	"11.0"	""	"12.2"	""	"19.7"	""	"18.2"	"23.7"	""	"863"	"27"	"36.000"	"29.000"	"0.0872932775599674"	"20"	"0.0001889"	"0.001087"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"8/76"	"8"	"76"	"168554.973632813"	"HCD"	"MS2"	"9.410213"	"12.7"	"100.000"	"89.7226"	"30968"	"30968"	"30955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.9"	""	"15.0"	""	"14.1"	""	"26.8"	""	"26.4"	"23.4"	""	"863"	"18"	"36.000"	"29.000"	"0.616567743097541"	"19"	"0.0006037"	"0.004271"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"5/76"	"5"	"76"	"162797.444213867"	"HCD"	"MS2"	"49.4347"	"13.0"	"100.000"	"91.5313"	"31578"	"31578"	"31573"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.8"	""	"16.1"	""	"14.9"	""	"23.3"	""	"24.6"	"25.4"	""	"863"	"27"	"36.000"	"29.000"	"0.077086938854866"	"25"	"0.0001889"	"0.0009981"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"10/76"	"10"	"76"	"203405.624389648"	"HCD"	"MS2"	"49.87638"	"16.0"	"100.000"	"94.3110"	"32511"	"32511"	"32506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.6"	""	"18.0"	""	"18.7"	""	"27.8"	""	"33.7"	"32.4"	""	"863"	"26"	"36.000"	"29.000"	"0.10616486211897"	"23"	"0.0001889"	"0.0008191"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"9/76"	"9"	"76"	"187452.715637207"	"HCD"	"MS2"	"6.142186"	"10.4"	"100.000"	"118.2985"	"37463"	"37463"	"37460"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"7.0"	""	"15.0"	""	"21.1"	""	"21.7"	"21.3"	""	"863"	"23"	"36.000"	"29.000"	"0.218263341654344"	"20"	"0.0006037"	"0.003968"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"687.90942"	"1374.81157"	"1374.81456"	"-2.17"	"-0.00149"	"10/76"	"10"	"76"	"191115.462280273"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"119.6327"	"37683"	"37683"	"37681"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.0"	""	"4.5"	""	"10.9"	""	"18.0"	""	"19.8"	"18.1"	""	"863"	"21"	"36.000"	"29.000"	"0.330354935882207"	"16"	"0.0001889"	"0.0008533"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90948"	"1374.81169"	"1374.81456"	"-2.08"	"-0.00143"	"5/76"	"5"	"76"	"109724.904052734"	"HCD"	"MS2"	"6.298422"	"8.7"	"100.000"	"109.4758"	"36010"	"36010"	"36007"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.1"	""	"10.1"	""	"12.4"	""	"16.6"	""	"13.1"	"22.3"	""	"863"	"20"	"36.000"	"29.000"	"0.390823617287573"	"14"	"0.0006037"	"0.004751"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"687.90948"	"1374.81169"	"1374.81456"	"-2.08"	"-0.00143"	"11/76"	"11"	"76"	"123844.132995605"	"HCD"	"MS2"	"11.62947"	"8.7"	"100.000"	"110.8518"	"36242"	"36242"	"36240"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.5"	""	"10.8"	""	"9.2"	""	"19.9"	""	"13.7"	"17.5"	""	"863"	"38"	"36.000"	"29.000"	"0.00682308528945171"	"21"	"0.0001308"	"0.0002054"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.90948"	"1374.81169"	"1374.81456"	"-2.08"	"-0.00143"	"11/76"	"11"	"76"	"131188.072937012"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"114.5837"	"36835"	"36835"	"36833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.9"	""	"8.0"	""	"11.9"	""	"15.0"	""	"23.7"	"20.9"	""	"863"	"25"	"36.000"	"29.000"	"0.121893570917613"	"19"	"0.0001889"	"0.0004673"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90948"	"1374.81169"	"1374.81456"	"-2.08"	"-0.00143"	"4/76"	"4"	"76"	"162164.092773438"	"HCD"	"MS2"	"38.72525"	"12.6"	"100.000"	"90.0955"	"31073"	"31073"	"31064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.6"	""	"11.7"	""	"15.2"	""	"27.1"	""	"30.1"	"23.9"	""	"863"	"16"	"36.000"	"29.000"	"1.10912578026477"	"13"	"0.000494"	"0.002732"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90948"	"1374.81169"	"1374.81456"	"-2.08"	"-0.00143"	"7/76"	"7"	"76"	"127854.843811035"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"113.2577"	"36623"	"36623"	"36621"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"10.5"	""	"8.5"	""	"15.0"	""	"16.3"	"14.7"	""	"863"	"18"	"36.000"	"29.000"	"0.669854994796912"	"14"	"0.0009404"	"0.009943"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"687.90948"	"1374.81169"	"1374.81456"	"-2.08"	"-0.00143"	"8/76"	"8"	"76"	"153754.423950195"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"118.3445"	"37452"	"37452"	"37450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"8.7"	""	"7.7"	""	"14.8"	""	"24.4"	"17.9"	""	"863"	"12"	"36.000"	"29.000"	"2.71631917902881"	"15"	"0.000523"	"0.003063"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"687.90948"	"1374.81169"	"1374.81456"	"-2.08"	"-0.00143"	"11/76"	"11"	"76"	"179111.183166504"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"119.3748"	"37638"	"37638"	"37636"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"14.0"	""	"9.5"	""	"16.2"	""	"26.8"	"17.0"	""	"863"	"31"	"36.000"	"29.000"	"0.0352355293241233"	"17"	"0.0001889"	"0.0006914"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.90955"	"1374.81182"	"1374.81456"	"-1.99"	"-0.00137"	"5/76"	"5"	"76"	"131594.928405762"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"107.3622"	"35645"	"35645"	"35641"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.4"	""	"8.2"	""	"15.0"	""	"18.8"	""	"24.1"	"20.0"	""	"863"	"25"	"36.000"	"29.000"	"0.127932474457975"	"19"	"0.0001889"	"0.0006581"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90955"	"1374.81182"	"1374.81456"	"-1.99"	"-0.00137"	"4/76"	"4"	"76"	"130322.460571289"	"HCD"	"MS2"	"7.70024"	"11.6"	"100.000"	"89.0237"	"30667"	"30667"	"30661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.6"	""	"10.5"	""	"14.7"	""	"19.8"	""	"26.9"	"23.5"	""	"863"	"19"	"36.000"	"29.000"	"0.595635810176144"	"14"	"0.0003839"	"0.002005"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"687.90955"	"1374.81182"	"1374.81456"	"-1.99"	"-0.00137"	"6/76"	"6"	"76"	"145255.25604248"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"103.9815"	"35048"	"35048"	"35046"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.7"	""	"10.3"	""	"11.6"	""	"17.6"	""	"19.7"	"20.0"	""	"863"	"26"	"36.000"	"29.000"	"0.114282780980879"	"21"	"0.0003839"	"0.001616"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"687.90955"	"1374.81182"	"1374.81456"	"-1.99"	"-0.00137"	"9/76"	"9"	"76"	"127984.558044434"	"HCD"	"MS2"	"6.909244"	"9.3"	"100.000"	"108.6630"	"35875"	"35875"	"35873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"9.6"	""	"9.1"	""	"18.1"	""	"19.5"	"20.3"	""	"863"	"21"	"36.000"	"29.000"	"0.331116482659625"	"16"	"0.0004166"	"0.002433"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"687.90955"	"1374.81182"	"1374.81456"	"-1.99"	"-0.00137"	"11/76"	"11"	"76"	"143392.75402832"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"116.2855"	"37106"	"37106"	"37104"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.3"	""	"11.3"	""	"12.1"	""	"16.8"	""	"17.8"	"19.8"	""	"863"	"32"	"36.000"	"29.000"	"0.0272885713868839"	"18"	"0.0001889"	"0.0005181"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90955"	"1374.81182"	"1374.81456"	"-1.99"	"-0.00137"	"10/76"	"10"	"76"	"140340.327270508"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"116.5435"	"37149"	"37149"	"37147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.9"	""	"4.4"	""	"8.5"	""	"15.8"	""	"20.4"	"16.6"	""	"863"	"28"	"36.000"	"29.000"	"0.0753322258985198"	"14"	"0.0001889"	"0.0007335"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90955"	"1374.81182"	"1374.81456"	"-1.99"	"-0.00137"	"9/76"	"9"	"76"	"169343.858581543"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"115.3028"	"36932"	"36932"	"36930"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.8"	""	"10.5"	""	"12.7"	""	"20.3"	""	"18.4"	"19.5"	""	"863"	"14"	"36.000"	"29.000"	"1.56307853816805"	"13"	"0.0002723"	"0.001362"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"687.90955"	"1374.81182"	"1374.81456"	"-1.99"	"-0.00137"	"6/76"	"6"	"76"	"135914.740478516"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"112.1332"	"36441"	"36441"	"36439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"5.4"	""	"10.8"	""	"15.6"	""	"15.5"	"17.2"	""	"863"	"27"	"36.000"	"29.000"	"0.0829814081024733"	"16"	"0.0001889"	"0.0009824"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"687.90955"	"1374.81182"	"1374.81456"	"-1.99"	"-0.00137"	"11/76"	"11"	"76"	"214584.992492676"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"93.8939"	"32356"	"32356"	"32347"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.6"	""	"13.5"	""	"17.9"	""	"22.0"	""	"27.7"	"21.9"	""	"863"	"46"	"36.000"	"29.000"	"0.00106900761786876"	"23"	"0.0001859"	"0.0003729"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90955"	"1374.81182"	"1374.81456"	"-1.99"	"-0.00137"	"8/76"	"8"	"76"	"2564364.8505249"	"HCD"	"MS2"	"49.46321"	"112.5"	"100.000"	"64.7875"	"20908"	"20908"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.1"	""	"144.3"	""	"146.5"	""	"178.7"	""	"210.1"	"219.5"	""	"863"	"5"	"36.000"	"29.000"	"13.0011209943631"	"13"	"0.0006037"	"0.003907"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"687.90961"	"1374.81194"	"1374.81456"	"-1.91"	"-0.00131"	"10/76"	"10"	"76"	"123015.284057617"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"100.2319"	"34233"	"34233"	"34229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.5"	""	"9.4"	""	"14.1"	""	"23.5"	""	"18.7"	"25.9"	""	"862"	"37"	"36.000"	"29.000"	"0.00834597866460986"	"21"	"0.0001889"	"0.0004819"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"687.90961"	"1374.81194"	"1374.81456"	"-1.91"	"-0.00131"	"9/76"	"9"	"76"	"116550.217590332"	"HCD"	"MS2"	"8.118633"	"9.9"	"100.000"	"108.1243"	"35780"	"35780"	"35774"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.3"	""	"10.5"	""	"13.4"	""	"18.7"	""	"22.2"	"18.2"	""	"862"	"30"	"36.000"	"29.000"	"0.0481368059793421"	"21"	"0.0003146"	"0.001431"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"687.90961"	"1374.81194"	"1374.81456"	"-1.91"	"-0.00131"	"11/76"	"11"	"76"	"132822.223999023"	"HCD"	"MS2"	"15.14482"	"12.0"	"100.000"	"96.4708"	"33162"	"33162"	"33159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.2"	""	"10.7"	""	"12.3"	""	"28.3"	""	"25.5"	"24.6"	""	"862"	"38"	"36.000"	"29.000"	"0.00649347645526485"	"22"	"0.0001889"	"0.0003751"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"687.90961"	"1374.81194"	"1374.81456"	"-1.91"	"-0.00131"	"10/76"	"10"	"76"	"148507.908691406"	"HCD"	"MS2"	"31.41381"	"11.1"	"100.000"	"90.3783"	"31207"	"31207"	"31196"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.6"	""	"11.5"	""	"12.1"	""	"21.0"	""	"29.7"	"21.5"	""	"862"	"35"	"36.000"	"29.000"	"0.0152221946180333"	"22"	"0.0001889"	"0.0004141"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"687.90961"	"1374.81194"	"1374.81456"	"-1.91"	"-0.00131"	"9/76"	"9"	"76"	"136744.157775879"	"HCD"	"MS2"	"7.709537"	"9.1"	"100.000"	"114.7870"	"36850"	"36850"	"36847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.8"	""	"7.4"	""	"13.6"	""	"15.1"	""	"21.3"	"15.8"	""	"862"	"22"	"36.000"	"29.000"	"0.253791615458259"	"17"	"0.0003839"	"0.001622"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90961"	"1374.81194"	"1374.81456"	"-1.91"	"-0.00131"	"8/76"	"8"	"76"	"134466.736694336"	"HCD"	"MS2"	"11.65436"	"9.3"	"100.000"	"107.2697"	"35629"	"35629"	"35627"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.8"	""	"8.2"	""	"11.6"	""	"20.5"	""	"19.8"	"16.6"	""	"862"	"18"	"36.000"	"29.000"	"0.697392496224161"	"14"	"0.0006037"	"0.005693"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"687.90961"	"1374.81194"	"1374.81456"	"-1.91"	"-0.00131"	"6/76"	"6"	"76"	"191146.508483887"	"HCD"	"MS2"	"42.96572"	"10.5"	"100.000"	"88.7648"	"30578"	"30578"	"30570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"14.4"	""	"13.3"	""	"21.2"	""	"20.5"	"22.4"	""	"862"	"24"	"36.000"	"29.000"	"0.187273906617947"	"16"	"0.0003839"	"0.001709"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"9/76"	"9"	"76"	"116131.058349609"	"HCD"	"MS2"	"16.67389"	"9.1"	"100.000"	"109.7791"	"36064"	"36064"	"36062"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.0"	""	"5.6"	""	"7.4"	""	"19.9"	""	"22.2"	"18.8"	""	"862"	"28"	"36.000"	"29.000"	"0.0737016600803913"	"20"	"0.0002277"	"0.001132"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"9/76"	"9"	"76"	"115448.291931152"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"102.8056"	"34795"	"34795"	"34791"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.9"	""	"13.5"	""	"12.3"	""	"18.2"	""	"20.7"	"18.4"	""	"862"	"29"	"36.000"	"29.000"	"0.0522970594550405"	"20"	"0.0001889"	"0.0009615"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"10/76"	"10"	"76"	"112246.540649414"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"113.5265"	"36665"	"36665"	"36663"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"6.6"	""	"10.4"	""	"11.8"	""	"15.7"	"12.8"	""	"862"	"23"	"36.000"	"29.000"	"0.206289569791057"	"14"	"0.0001889"	"0.001096"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"9/76"	"9"	"76"	"134604.007873535"	"HCD"	"MS2"	"29.41939"	"10.9"	"100.000"	"95.9485"	"33013"	"33013"	"33008"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.2"	""	"9.3"	""	"14.7"	""	"20.4"	""	"22.3"	"23.7"	""	"862"	"28"	"36.000"	"29.000"	"0.0697392496224161"	"20"	"0.0003839"	"0.001659"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"10/76"	"10"	"76"	"124129.101623535"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"114.3292"	"36795"	"36795"	"36793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	""	"6.7"	""	"13.6"	""	"13.5"	""	"17.1"	"17.5"	""	"862"	"33"	"36.000"	"29.000"	"0.0237398117150728"	"23"	"0.0001889"	"0.0009208"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"5/76"	"5"	"76"	"130017.294677734"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"110.5892"	"36197"	"36197"	"36195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"9.1"	""	"11.9"	""	"15.2"	""	"14.3"	"19.5"	""	"862"	"16"	"36.000"	"29.000"	"1.13364550450691"	"13"	"0.0009404"	"0.009899"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"9/76"	"9"	"76"	"149770.796386719"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"96.5051"	"33164"	"33164"	"33157"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.0"	""	"14.2"	""	"12.4"	""	"22.0"	""	"25.8"	"22.5"	""	"862"	"34"	"36.000"	"29.000"	"0.0162359337362065"	"21"	"0.0001889"	"0.0007701"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"10/76"	"10"	"76"	"185384.715576172"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"104.2512"	"35099"	"35099"	"35096"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.8"	""	"13.5"	""	"9.4"	""	"20.9"	""	"22.5"	"24.5"	""	"862"	"28"	"36.000"	"29.000"	"0.0750718762431785"	"16"	"0.0001889"	"0.0005653"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"11/76"	"11"	"76"	"171712.087402344"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"116.9990"	"37241"	"37241"	"37238"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.9"	""	"12.5"	""	"10.4"	""	"23.7"	""	"21.9"	"18.7"	""	"862"	"35"	"36.000"	"29.000"	"0.0141409071331754"	"20"	"0.0001889"	"0.0004457"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"10/76"	"10"	"76"	"196809.191955566"	"HCD"	"MS2"	"49.30213"	"14.9"	"100.000"	"91.5771"	"31621"	"31621"	"31614"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.3"	""	"18.7"	""	"16.3"	""	"31.5"	""	"29.2"	"31.4"	""	"862"	"23"	"36.000"	"29.000"	"0.195648836776237"	"24"	"0.0002723"	"0.001387"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"9/76"	"9"	"76"	"188858.176757813"	"HCD"	"MS2"	"12.24493"	"13.2"	"100.000"	"97.2652"	"33403"	"33403"	"33395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.3"	""	"13.9"	""	"15.6"	""	"29.0"	""	"29.0"	"27.8"	""	"862"	"27"	"36.000"	"29.000"	"0.0892230921328938"	"19"	"0.0001889"	"0.0009783"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"11/76"	"11"	"76"	"209642.349121094"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"117.8363"	"37368"	"37368"	"37364"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"11.8"	""	"15.5"	""	"23.0"	""	"19.9"	"14.3"	""	"862"	"30"	"36.000"	"29.000"	"0.038501466348905"	"16"	"0.0001889"	"0.0007961"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"10/76"	"10"	"76"	"225221.215942383"	"HCD"	"MS2"	"5.729089"	"11.4"	"100.000"	"105.0373"	"35246"	"35246"	"35242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.9"	""	"14.6"	""	"14.6"	""	"16.8"	""	"28.5"	"20.9"	""	"862"	"26"	"36.000"	"29.000"	"0.100803884986218"	"20"	"0.0004166"	"0.002252"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"687.90967"	"1374.81206"	"1374.81456"	"-1.82"	"-0.00125"	"14/76"	"14"	"76"	"41355813.526001"	"HCD"	"MS2"	"12.46387"	"2053.9"	"72.911"	"45.4071"	"13021"	"13021"	"13003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2551.5"	""	"2119.6"	""	"2207.7"	""	"4494.5"	""	"4261.4"	"4010.1"	""	"862"	"50"	"36.000"	"29.000"	"0.000416367928844609"	"28"	"0.0001889"	"0.0005356"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"458.94223"	"1374.81214"	"1374.81456"	"-1.76"	"-0.00081"	"8/76"	"8"	"76"	"293654533.941406"	"HCD"	"MS2"	"4.333241"	"440.3"	"4.132"	"45.7534"	"13161"	"13161"	"13154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"500.1"	""	"423.5"	""	"458.9"	""	"883.2"	""	"995.5"	"928.3"	""	"862"	"27"	"36.000"	"29.000"	"0.0789727516041991"	"21"	"0.002925"	"0.05006"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"9/76"	"9"	"76"	"126460.657409668"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"99.3319"	"33983"	"33983"	"33980"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.5"	""	"11.4"	""	"14.0"	""	"23.8"	""	"19.1"	"21.2"	""	"862"	"27"	"36.000"	"29.000"	"0.0902562468471734"	"20"	"0.0001889"	"0.001058"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"8/76"	"8"	"76"	"119617.678405762"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"111.8747"	"36402"	"36402"	"36400"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.2"	""	"8.1"	""	"13.1"	""	"14.3"	""	"16.0"	"20.2"	""	"862"	"19"	"36.000"	"29.000"	"0.515795168993422"	"16"	"0.0004166"	"0.002196"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"11/76"	"11"	"76"	"124792.550048828"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"107.5300"	"35675"	"35675"	"35673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	""	"7.1"	""	"8.8"	""	"21.4"	""	"20.1"	"19.6"	""	"862"	"25"	"36.000"	"29.000"	"0.142717513358997"	"18"	"0.0001889"	"0.0005001"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"7/76"	"7"	"76"	"122298.937316895"	"HCD"	"MS2"	"5.331989"	"8.0"	"100.000"	"112.3852"	"36479"	"36479"	"36477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"9.0"	""	"12.4"	""	"15.5"	""	"19.4"	"11.3"	""	"862"	"38"	"36.000"	"29.000"	"0.00610207119161501"	"20"	"0.0001308"	"0.000269"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"11/76"	"11"	"76"	"123503.866027832"	"HCD"	"MS2"	"16.3516"	"8.2"	"100.000"	"110.0861"	"36120"	"36120"	"36117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"7.0"	""	"7.2"	""	"16.1"	""	"18.0"	"18.9"	""	"862"	"38"	"36.000"	"29.000"	"0.00615853296118284"	"22"	"0.0001889"	"0.0004031"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"5/76"	"5"	"76"	"157268.858337402"	"HCD"	"MS2"	"23.92604"	"12.9"	"100.000"	"87.5202"	"30098"	"30098"	"30088"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.2"	""	"19.7"	""	"11.2"	""	"21.1"	""	"29.5"	"25.1"	""	"862"	"27"	"36.000"	"29.000"	"0.0791548025983137"	"25"	"0.0002277"	"0.001229"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"11/76"	"11"	"76"	"144878.411682129"	"HCD"	"MS2"	"8.10673"	"10.3"	"100.000"	"107.9245"	"35743"	"35743"	"35741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.4"	""	"14.0"	""	"12.0"	""	"20.1"	""	"19.6"	"20.0"	""	"862"	"40"	"36.000"	"29.000"	"0.00445120165883162"	"23"	"0"	"0.0001618"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"9/76"	"9"	"76"	"175020.207519531"	"HCD"	"MS2"	"46.40015"	"13.9"	"100.000"	"94.2379"	"32505"	"32505"	"32500"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.5"	""	"16.4"	""	"17.7"	""	"23.4"	""	"31.1"	"28.1"	""	"862"	"22"	"36.000"	"29.000"	"0.249159396431864"	"17"	"0.0001889"	"0.0009933"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"9/76"	"9"	"76"	"187804.357727051"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"118.6813"	"37526"	"37526"	"37523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.3"	""	"10.1"	""	"11.4"	""	"20.2"	""	"25.6"	"17.7"	""	"862"	"15"	"36.000"	"29.000"	"1.48073475544846"	"13"	"0.0004166"	"0.002217"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"11/76"	"11"	"76"	"168789.350036621"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"105.2949"	"35289"	"35289"	"35286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.8"	""	"6.9"	""	"13.5"	""	"20.6"	""	"19.1"	"23.9"	""	"862"	"34"	"36.000"	"29.000"	"0.0170011097194445"	"20"	"0.0001889"	"0.0009349"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"687.90973"	"1374.81218"	"1374.81456"	"-1.73"	"-0.00119"	"9/76"	"9"	"76"	"157557.835388184"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"109.7878"	"36068"	"36068"	"36065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.8"	""	"8.3"	""	"8.0"	""	"19.1"	""	"16.7"	"14.7"	""	"862"	"24"	"36.000"	"29.000"	"0.156486641605914"	"18"	"0.0003146"	"0.001442"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"10/76"	"10"	"76"	"130077.673034668"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"99.6008"	"34068"	"34068"	"34064"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.5"	""	"11.5"	""	"16.5"	""	"24.9"	""	"22.5"	"23.5"	""	"867"	"36"	"36.000"	"29.000"	"0.0118573899285396"	"20"	"0.0001889"	"0.0004891"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"9/76"	"9"	"76"	"120319.899780273"	"HCD"	"MS2"	"5.640102"	"8.8"	"100.000"	"110.6000"	"36202"	"36202"	"36200"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.8"	""	"9.2"	""	"9.3"	""	"23.9"	""	"17.2"	"17.6"	""	"867"	"28"	"36.000"	"29.000"	"0.0762059886651093"	"18"	"0.0001889"	"0.000955"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"10/76"	"10"	"76"	"126554.902832031"	"HCD"	"MS2"	"10.16175"	"11.2"	"100.000"	"96.2221"	"33082"	"33082"	"33078"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.5"	""	"11.8"	""	"14.6"	""	"24.4"	""	"18.8"	"23.4"	""	"867"	"30"	"36.000"	"29.000"	"0.0457076719585611"	"21"	"0.0001889"	"0.0008621"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"7/76"	"7"	"76"	"111541.191833496"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"105.6346"	"35337"	"35337"	"35334"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"11.0"	""	"7.0"	""	"15.8"	""	"16.3"	"20.6"	""	"867"	"46"	"36.000"	"29.000"	"0.00098172330734159"	"21"	"0"	"0.0001466"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"7/76"	"7"	"76"	"124609.130371094"	"HCD"	"MS2"	"6.03197"	"8.5"	"100.000"	"111.1055"	"36283"	"36283"	"36279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.1"	""	"9.6"	""	"10.4"	""	"14.5"	""	"20.7"	"16.2"	""	"867"	"18"	"36.000"	"29.000"	"0.647126376552494"	"19"	"0.00119"	"0.01585"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"10/76"	"10"	"76"	"131369.966918945"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"119.4441"	"37664"	"37664"	"37661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.0"	""	"7.3"	""	"9.5"	""	"20.7"	""	"19.4"	"18.8"	""	"867"	"28"	"36.000"	"29.000"	"0.0682321571746106"	"21"	"0.0002277"	"0.001348"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"11/76"	"11"	"76"	"133071.325866699"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"105.8203"	"35373"	"35373"	"35371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"12.0"	""	"10.2"	""	"19.6"	""	"20.7"	"23.1"	""	"867"	"21"	"36.000"	"29.000"	"0.35155161857964"	"20"	"0.0001889"	"0.0004735"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"10/76"	"10"	"76"	"131115.891296387"	"HCD"	"MS2"	"4.967958"	"8.3"	"100.000"	"110.3473"	"36161"	"36161"	"36159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"11.2"	""	"6.9"	""	"19.9"	""	"14.1"	"19.9"	""	"867"	"23"	"36.000"	"29.000"	"0.203699096080361"	"14"	"0.000494"	"0.002665"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"10/76"	"10"	"76"	"116667.871337891"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"114.0115"	"36725"	"36725"	"36723"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.5"	""	"9.1"	""	"8.2"	""	"18.2"	""	"13.3"	"13.2"	""	"867"	"19"	"36.000"	"29.000"	"0.545744166012771"	"15"	"0.0003839"	"0.001811"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"9/76"	"9"	"76"	"135459.898681641"	"HCD"	"MS2"	"16.84668"	"11.4"	"100.000"	"91.8230"	"31678"	"31678"	"31666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.2"	""	"10.0"	""	"15.4"	""	"23.0"	""	"19.2"	"26.0"	""	"867"	"27"	"36.000"	"29.000"	"0.0788840322207428"	"20"	"0.0002277"	"0.001206"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"9/76"	"9"	"76"	"132399.117126465"	"HCD"	"MS2"	"7.150218"	"10.6"	"100.000"	"108.9626"	"35928"	"35928"	"35925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.6"	""	"11.2"	""	"13.4"	""	"24.5"	""	"20.5"	"18.2"	""	"867"	"22"	"36.000"	"29.000"	"0.270389051181629"	"14"	"0.0005564"	"0.003321"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"10/76"	"10"	"76"	"177232.602416992"	"HCD"	"MS2"	"48.34854"	"13.0"	"100.000"	"93.1336"	"32140"	"32140"	"32134"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.0"	""	"12.6"	""	"17.1"	""	"27.3"	""	"26.0"	"29.2"	""	"867"	"17"	"36.000"	"29.000"	"0.874961818655956"	"14"	"0.0002723"	"0.00137"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"10/76"	"10"	"76"	"135872.457580566"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"113.7526"	"36688"	"36688"	"36685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.4"	""	"10.0"	""	"7.5"	""	"15.9"	""	"15.1"	"21.6"	""	"867"	"28"	"36.000"	"29.000"	"0.0635314989054387"	"16"	"0.0001889"	"0.001016"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"9/76"	"9"	"76"	"150492.062194824"	"HCD"	"MS2"	"7.726595"	"11.7"	"100.000"	"97.5292"	"33474"	"33474"	"33468"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.7"	""	"10.6"	""	"15.9"	""	"23.9"	""	"24.6"	"21.6"	""	"867"	"28"	"36.000"	"29.000"	"0.0741291639091639"	"19"	"0.0001889"	"0.0004918"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"8/76"	"8"	"76"	"126690.944458008"	"HCD"	"MS2"	"6.563855"	"8.5"	"100.000"	"110.3360"	"36157"	"36157"	"36155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"10.4"	""	"8.8"	""	"17.3"	""	"20.9"	"15.0"	""	"867"	"16"	"36.000"	"29.000"	"1.09141294818346"	"13"	"0.0009727"	"0.01035"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"8/76"	"8"	"76"	"175575.214233398"	"HCD"	"MS2"	"7.667692"	"8.3"	"100.000"	"112.4420"	"36493"	"36493"	"36489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.6"	""	"7.7"	""	"10.2"	""	"17.6"	""	"15.8"	"16.3"	""	"867"	"25"	"36.000"	"29.000"	"0.148248088329693"	"18"	"0.000523"	"0.002979"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"687.90979"	"1374.81230"	"1374.81456"	"-1.64"	"-0.00113"	"10/76"	"10"	"76"	"144857.381286621"	"HCD"	"MS2"	"8.803998"	"10.8"	"100.000"	"93.6261"	"32263"	"32263"	"32257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.1"	""	"11.7"	""	"14.1"	""	"22.8"	""	"25.7"	"20.4"	""	"867"	"30"	"36.000"	"29.000"	"0.0409250389869948"	"22"	"0.0001889"	"0.000427"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"10/76"	"10"	"76"	"121060.039306641"	"HCD"	"MS2"	"10.07401"	"9.7"	"100.000"	"105.5639"	"35330"	"35330"	"35328"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"10.2"	""	"13.9"	""	"19.8"	""	"20.2"	"20.6"	""	"867"	"40"	"36.000"	"29.000"	"0.00472051195460043"	"22"	"0.0001889"	"0.0004989"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"11/76"	"11"	"76"	"133239.29901123"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"93.9457"	"32399"	"32399"	"32393"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.8"	""	"16.9"	""	"10.3"	""	"23.1"	""	"21.4"	"22.3"	""	"867"	"30"	"36.000"	"29.000"	"0.0409250389869948"	"19"	"0.0001889"	"0.0004569"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"10/76"	"10"	"76"	"137259.48614502"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"100.7445"	"34336"	"34336"	"34331"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.5"	""	"12.5"	""	"17.8"	""	"24.5"	""	"22.7"	"31.2"	""	"867"	"31"	"36.000"	"29.000"	"0.0363905904156158"	"21"	"0.0001889"	"0.0004158"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"9/76"	"9"	"76"	"138124.792175293"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"105.9524"	"35390"	"35390"	"35388"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"14.3"	""	"12.6"	""	"17.7"	""	"19.5"	"18.5"	""	"867"	"26"	"36.000"	"29.000"	"0.104469400333564"	"19"	"0.0003839"	"0.001577"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"9/76"	"9"	"76"	"139713.021362305"	"HCD"	"MS2"	"9.193354"	"10.3"	"100.000"	"93.6868"	"32312"	"32312"	"32309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.5"	""	"9.4"	""	"12.9"	""	"18.9"	""	"21.5"	"23.9"	""	"867"	"26"	"36.000"	"29.000"	"0.0977212698468078"	"20"	"0.0003571"	"0.001539"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"10/76"	"10"	"76"	"133706.68951416"	"HCD"	"MS2"	"7.914156"	"9.4"	"100.000"	"108.4046"	"35832"	"35832"	"35829"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.9"	""	"15.0"	""	"11.8"	""	"16.9"	""	"19.0"	"18.4"	""	"867"	"30"	"36.000"	"29.000"	"0.0413037137104253"	"22"	"0.0002277"	"0.001221"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"9/76"	"9"	"76"	"157387.007751465"	"HCD"	"MS2"	"7.494293"	"9.6"	"100.000"	"117.5734"	"37322"	"37322"	"37320"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.2"	""	"11.9"	""	"11.2"	""	"19.5"	""	"18.7"	"19.2"	""	"867"	"19"	"36.000"	"29.000"	"0.570149964755335"	"14"	"0.000494"	"0.002657"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"7/76"	"7"	"76"	"130062.18536377"	"HCD"	"MS2"	"6.778484"	"9.2"	"100.000"	"110.0648"	"36112"	"36112"	"36110"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"8.4"	""	"12.1"	""	"17.9"	""	"19.2"	"19.4"	""	"867"	"37"	"36.000"	"29.000"	"0.00845257633995112"	"19"	"0.0001889"	"0.0004864"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"11/76"	"11"	"76"	"148881.364868164"	"HCD"	"MS2"	"11.15268"	"11.1"	"100.000"	"100.3052"	"34225"	"34225"	"34223"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.7"	""	"9.6"	""	"12.8"	""	"24.2"	""	"23.6"	"26.6"	""	"867"	"40"	"36.000"	"29.000"	"0.00403635264015304"	"22"	"0.0001859"	"0.0003655"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"9/76"	"9"	"76"	"168946.535095215"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"117.0649"	"37236"	"37236"	"37233"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.4"	""	"11.0"	""	"11.9"	""	"25.7"	""	"17.0"	"20.4"	""	"867"	"27"	"36.000"	"29.000"	"0.0820330958682596"	"19"	"0.0001889"	"0.000564"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"4/76"	"4"	"76"	"157168.002075195"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"116.7345"	"37196"	"37196"	"37194"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.2"	""	"6.5"	""	"12.4"	""	"19.1"	""	"21.7"	"21.9"	""	"867"	"15"	"36.000"	"29.000"	"1.29416336530093"	"13"	"0.000523"	"0.003027"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90985"	"1374.81243"	"1374.81456"	"-1.55"	"-0.00107"	"10/76"	"10"	"76"	"200391.676696777"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"116.2139"	"37112"	"37112"	"37108"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.4"	""	"7.1"	""	"11.4"	""	"18.1"	""	"19.7"	"16.3"	""	"867"	"24"	"36.000"	"29.000"	"0.177823478644694"	"14"	"0.0002277"	"0.001346"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"687.90991"	"1374.81255"	"1374.81456"	"-1.46"	"-0.00100"	"11/76"	"11"	"76"	"160789.645263672"	"HCD"	"MS2"	"13.2788"	"14.5"	"100.000"	"87.4487"	"30123"	"30123"	"30103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.1"	""	"13.4"	""	"18.6"	""	"24.5"	""	"30.6"	"33.6"	""	"867"	"31"	"36.000"	"29.000"	"0.0381056261046188"	"23"	"0.0001889"	"0.0005263"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"687.90991"	"1374.81255"	"1374.81456"	"-1.46"	"-0.00100"	"9/76"	"9"	"76"	"143237.772094727"	"HCD"	"MS2"	"14.51898"	"9.8"	"100.000"	"108.2013"	"35792"	"35792"	"35790"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.0"	""	"10.8"	""	"12.2"	""	"18.2"	""	"17.0"	"20.6"	""	"867"	"23"	"36.000"	"29.000"	"0.207964449984005"	"18"	"0.0003839"	"0.001731"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"687.90991"	"1374.81255"	"1374.81456"	"-1.46"	"-0.00100"	"11/76"	"11"	"76"	"144736.98425293"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"105.0746"	"35247"	"35247"	"35243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"11.8"	""	"12.2"	""	"22.0"	""	"17.9"	"17.7"	""	"867"	"25"	"36.000"	"29.000"	"0.151004226068111"	"17"	"0.0001889"	"0.0006094"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"687.90991"	"1374.81255"	"1374.81456"	"-1.46"	"-0.00100"	"11/76"	"11"	"76"	"190000.99798584"	"HCD"	"MS2"	"54.18454"	"14.9"	"100.000"	"90.0475"	"31089"	"31089"	"31074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.2"	""	"17.7"	""	"18.1"	""	"31.2"	""	"30.2"	"30.0"	""	"867"	"29"	"36.000"	"29.000"	"0.0571464296164202"	"22"	"0.0001889"	"0.0004457"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90991"	"1374.81255"	"1374.81456"	"-1.46"	"-0.00100"	"8/76"	"8"	"76"	"204585.399414063"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"118.6023"	"37497"	"37497"	"37495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.5"	""	"7.3"	""	"10.0"	""	"22.2"	""	"20.9"	"22.9"	""	"867"	"17"	"36.000"	"29.000"	"0.82982994349664"	"14"	"0.0003839"	"0.002015"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90991"	"1374.81255"	"1374.81456"	"-1.46"	"-0.00100"	"8/76"	"8"	"76"	"164639.402587891"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"118.0375"	"37421"	"37421"	"37419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.0"	""	"11.2"	""	"14.0"	""	"16.1"	""	"18.9"	"19.9"	""	"867"	"15"	"36.000"	"29.000"	"1.26179587068187"	"13"	"0.001217"	"0.01712"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"687.90991"	"1374.81255"	"1374.81456"	"-1.46"	"-0.00100"	"7/76"	"7"	"76"	"2214048.45269775"	"HCD"	"MS2"	"29.34755"	"182.9"	"100.000"	"52.3306"	"15791"	"15791"	"15762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"219.4"	""	"207.7"	""	"215.8"	""	"333.5"	"0.5"	"385.9"	"374.3"	""	"867"	"34"	"36.000"	"29.000"	"0.0170211579495726"	"25"	"0.0001308"	"0.0002341"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"687.90997"	"1374.81267"	"1374.81456"	"-1.37"	"-0.00094"	"10/76"	"10"	"76"	"118983.816101074"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"107.0188"	"35585"	"35585"	"35583"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.3"	""	"7.4"	""	"9.6"	""	"18.5"	""	"23.8"	"17.5"	""	"864"	"31"	"36.000"	"29.000"	"0.0360150271755682"	"22"	"0.0001889"	"0.0007964"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"687.90997"	"1374.81267"	"1374.81456"	"-1.37"	"-0.00094"	"9/76"	"9"	"76"	"135252.88067627"	"HCD"	"MS2"	"6.840055"	"9.7"	"100.000"	"104.4578"	"35138"	"35138"	"35135"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"13.5"	""	"9.3"	""	"16.7"	""	"21.3"	"22.4"	""	"864"	"27"	"36.000"	"29.000"	"0.0773541728943248"	"19"	"0.0001889"	"0.0004203"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"687.90997"	"1374.81267"	"1374.81456"	"-1.37"	"-0.00094"	"10/76"	"10"	"76"	"134027.161254883"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"107.6374"	"35695"	"35695"	"35691"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.7"	""	"9.0"	""	"12.0"	""	"26.2"	""	"18.0"	"21.3"	""	"864"	"31"	"36.000"	"29.000"	"0.0328460951638158"	"18"	"0.0001889"	"0.000635"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.90997"	"1374.81267"	"1374.81456"	"-1.37"	"-0.00094"	"8/76"	"8"	"76"	"149125.312194824"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"108.4535"	"35837"	"35837"	"35835"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"9.4"	""	"9.8"	""	"15.9"	""	"15.9"	"21.7"	""	"864"	"16"	"36.000"	"29.000"	"1.02443344084583"	"14"	"0.0006037"	"0.005581"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"687.90997"	"1374.81267"	"1374.81456"	"-1.37"	"-0.00094"	"10/76"	"10"	"76"	"205980.135559082"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"118.9377"	"37575"	"37575"	"37571"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.3"	""	"9.1"	""	"10.8"	""	"19.9"	""	"25.8"	"23.9"	""	"864"	"28"	"36.000"	"29.000"	"0.0692602008778098"	"21"	"0.0003839"	"0.001939"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"458.94241"	"1374.81269"	"1374.81456"	"-1.36"	"-0.00062"	"8/76"	"8"	"76"	"318343025.609375"	"HCD"	"MS2"	"3.634728"	"489.5"	"4.567"	"45.4961"	"13007"	"13007"	"12996"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"558.7"	""	"453.6"	""	"492.5"	""	"1023.0"	""	"1089.0"	"1044.5"	""	"861"	"29"	"36.000"	"29.000"	"0.0568817770517321"	"22"	"0.001966"	"0.02896"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"458.94241"	"1374.81269"	"1374.81456"	"-1.36"	"-0.00062"	"8/76"	"8"	"76"	"73662775.2442627"	"HCD"	"MS2"	"25.39925"	"910.1"	"37.676"	"45.2279"	"12899"	"12899"	"12880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1084.6"	""	"910.9"	""	"950.5"	""	"1945.0"	""	"1945.3"	"1815.3"	""	"861"	"27"	"36.000"	"29.000"	"0.081091093302536"	"21"	"0.0008731"	"0.008665"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"458.94244"	"1374.81278"	"1374.81456"	"-1.29"	"-0.00059"	"9/76"	"9"	"76"	"116024993.703125"	"HCD"	"MS2"	"3.878066"	"305.4"	"7.670"	"46.0351"	"13274"	"13274"	"13257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"325.4"	""	"306.4"	""	"310.9"	""	"597.7"	"10.5"	"676.2"	"678.5"	""	"861"	"26"	"36.000"	"29.000"	"0.101618587938424"	"21"	"0.0009404"	"0.01025"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"687.91003"	"1374.81279"	"1374.81456"	"-1.28"	"-0.00088"	"11/76"	"11"	"76"	"135904.690246582"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"114.0581"	"36748"	"36748"	"36744"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.1"	""	"6.5"	""	"13.4"	""	"21.7"	"1.3"	"16.4"	"17.1"	""	"861"	"32"	"36.000"	"29.000"	"0.0266056060259588"	"22"	"0.0001889"	"0.0004066"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"687.91003"	"1374.81279"	"1374.81456"	"-1.28"	"-0.00088"	"6/76"	"6"	"76"	"141306.179382324"	"HCD"	"MS2"	"9.290579"	"9.8"	"100.000"	"119.7033"	"37711"	"37711"	"37708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"13.4"	""	"11.1"	""	"16.5"	"1.5"	"21.9"	"16.8"	""	"861"	"28"	"36.000"	"29.000"	"0.0706273897362402"	"20"	"0.0001889"	"0.0004741"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"687.91003"	"1374.81279"	"1374.81456"	"-1.28"	"-0.00088"	"9/76"	"9"	"76"	"135997.67590332"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"100.8120"	"34353"	"34353"	"34348"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.4"	""	"10.8"	""	"8.5"	""	"21.9"	""	"26.9"	"16.2"	""	"861"	"24"	"36.000"	"29.000"	"0.181958838441342"	"17"	"0.0002723"	"0.001364"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"687.91003"	"1374.81279"	"1374.81456"	"-1.28"	"-0.00088"	"10/76"	"10"	"76"	"158777.206787109"	"HCD"	"MS2"	"15.18511"	"13.4"	"100.000"	"91.1496"	"31478"	"31478"	"31471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"10.2"	""	"18.6"	""	"21.5"	""	"31.8"	"32.3"	""	"861"	"28"	"36.000"	"29.000"	"0.0751576436832278"	"20"	"0.0001889"	"0.0009705"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"687.91003"	"1374.81279"	"1374.81456"	"-1.28"	"-0.00088"	"10/76"	"10"	"76"	"141653.544189453"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"96.7938"	"33255"	"33255"	"33248"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.8"	""	"13.8"	""	"10.6"	""	"23.0"	""	"24.5"	"25.3"	""	"861"	"29"	"36.000"	"29.000"	"0.0512829684455786"	"22"	"0.0002277"	"0.001262"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.91003"	"1374.81279"	"1374.81456"	"-1.28"	"-0.00088"	"10/76"	"10"	"76"	"146895.79473877"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"115.9589"	"37068"	"37068"	"37064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.1"	""	"11.7"	""	"12.6"	""	"20.0"	""	"15.4"	"18.2"	""	"861"	"14"	"36.000"	"29.000"	"1.76999954935497"	"13"	"0.0003146"	"0.001423"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"687.91003"	"1374.81279"	"1374.81456"	"-1.28"	"-0.00088"	"9/76"	"9"	"76"	"166522.423461914"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"106.4884"	"35488"	"35488"	"35483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"11.0"	""	"8.8"	""	"21.6"	""	"22.9"	"21.6"	""	"861"	"31"	"36.000"	"29.000"	"0.0383683528866578"	"21"	"0.0003571"	"0.001489"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"687.91003"	"1374.81279"	"1374.81456"	"-1.28"	"-0.00088"	"4/76"	"4"	"76"	"174818.308532715"	"HCD"	"MS2"	"6.626396"	"8.8"	"100.000"	"106.8404"	"35555"	"35555"	"35552"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"9.5"	""	"11.0"	""	"18.0"	""	"16.8"	"15.6"	""	"861"	"21"	"36.000"	"29.000"	"0.307590668375509"	"17"	"0.0008731"	"0.008428"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"687.91010"	"1374.81291"	"1374.81456"	"-1.20"	"-0.00082"	"10/76"	"10"	"76"	"115157.610290527"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"103.3410"	"34911"	"34911"	"34905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.2"	""	"8.8"	""	"13.9"	""	"20.2"	""	"20.2"	"19.9"	""	"860"	"36"	"36.000"	"29.000"	"0.0121190466044372"	"20"	"0.0001889"	"0.0005769"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.91010"	"1374.81291"	"1374.81456"	"-1.20"	"-0.00082"	"7/76"	"7"	"76"	"120119.754394531"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"111.3637"	"36322"	"36322"	"36318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"7.9"	""	"11.8"	""	"20.2"	""	"15.3"	"23.7"	""	"860"	"9"	"36.000"	"29.000"	"4.92570564821581"	"13"	"0.00103"	"0.01254"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"687.91010"	"1374.81291"	"1374.81456"	"-1.20"	"-0.00082"	"5/76"	"5"	"76"	"140282.491882324"	"HCD"	"MS2"	"29.67297"	"12.3"	"100.000"	"89.6325"	"30895"	"30895"	"30877"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.4"	""	"14.9"	""	"19.5"	""	"22.6"	""	"22.6"	"23.5"	""	"860"	"27"	"36.000"	"29.000"	"0.0857962795436619"	"25"	"0.0002277"	"0.001144"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.91010"	"1374.81291"	"1374.81456"	"-1.20"	"-0.00082"	"8/76"	"8"	"76"	"174365.85369873"	"HCD"	"MS2"	"9.737552"	"8.3"	"100.000"	"117.7818"	"37374"	"37374"	"37372"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.1"	""	"7.8"	""	"8.7"	""	"15.6"	""	"18.3"	"20.9"	""	"860"	"16"	"36.000"	"29.000"	"1.18978490752695"	"13"	"0.0003571"	"0.001502"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"687.91010"	"1374.81291"	"1374.81456"	"-1.20"	"-0.00082"	"6/76"	"6"	"76"	"207565.02722168"	"HCD"	"MS2"	"11.41414"	"11.2"	"100.000"	"101.9774"	"34626"	"34626"	"34623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.4"	""	"12.0"	""	"13.5"	""	"19.1"	""	"22.8"	"24.2"	""	"860"	"23"	"36.000"	"29.000"	"0.217004357952317"	"16"	"0.000494"	"0.002642"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"687.91010"	"1374.81291"	"1374.81456"	"-1.20"	"-0.00082"	"11/76"	"11"	"76"	"208183.597473145"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"95.4163"	"32879"	"32879"	"32876"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.3"	""	"13.6"	""	"15.0"	""	"22.2"	""	"23.7"	"28.4"	""	"860"	"24"	"36.000"	"29.000"	"0.161238390965558"	"22"	"0.0001889"	"0.0006966"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"687.91010"	"1374.81291"	"1374.81456"	"-1.20"	"-0.00082"	"14/76"	"14"	"76"	"71858667.9134521"	"HCD"	"MS2"	"5.002553"	"2925.4"	"64.184"	"45.1890"	"12883"	"12883"	"12864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3642.7"	""	"3012.9"	""	"3077.1"	""	"6392.1"	""	"6080.5"	"5780.1"	""	"860"	"50"	"36.000"	"29.000"	"0.000405012526504822"	"28"	"0.0001889"	"0.000783"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"458.94250"	"1374.81296"	"1374.81456"	"-1.16"	"-0.00053"	"8/76"	"8"	"76"	"287675467.850586"	"HCD"	"MS2"	"3.805814"	"561.7"	"5.634"	"48.3709"	"14228"	"14228"	"14211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"593.6"	"1.7"	"558.3"	""	"638.9"	""	"1131.1"	""	"1220.3"	"1202.7"	""	"860"	"27"	"36.000"	"29.000"	"0.0778876239826429"	"22"	"0.0006037"	"0.005476"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"687.91016"	"1374.81304"	"1374.81456"	"-1.11"	"-0.00076"	"8/76"	"8"	"76"	"155856.313476563"	"HCD"	"MS2"	"7.250504"	"7.8"	"100.000"	"112.1806"	"36451"	"36451"	"36448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"7.4"	""	"12.6"	""	"16.7"	""	"13.0"	"14.4"	""	"866"	"24"	"36.000"	"29.000"	"0.191640765233017"	"17"	"0.0004166"	"0.002421"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"687.91016"	"1374.81304"	"1374.81456"	"-1.11"	"-0.00076"	"9/76"	"9"	"76"	"188499.29486084"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"117.3218"	"37282"	"37282"	"37279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"11.0"	""	"14.2"	""	"22.4"	""	"23.4"	"21.0"	""	"866"	"26"	"36.000"	"29.000"	"0.107025655479198"	"19"	"0.0003839"	"0.002028"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"687.91016"	"1374.81304"	"1374.81456"	"-1.11"	"-0.00076"	"6/76"	"6"	"76"	"186103.065979004"	"HCD"	"MS2"	"5.206101"	"9.5"	"100.000"	"116.8076"	"37194"	"37194"	"37191"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.4"	""	"7.5"	""	"11.2"	""	"18.9"	""	"20.0"	"21.8"	""	"866"	"34"	"36.000"	"29.000"	"0.0184284112886911"	"22"	"0.0001889"	"0.0004074"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"687.91016"	"1374.81304"	"1374.81456"	"-1.11"	"-0.00076"	"10/76"	"10"	"76"	"202240.399353027"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"99.1798"	"33934"	"33934"	"33930"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.5"	""	"12.2"	""	"17.2"	""	"19.0"	""	"19.6"	"23.6"	""	"866"	"32"	"36.000"	"29.000"	"0.0265147719616827"	"22"	"0.0001889"	"0.00071"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"458.94254"	"1374.81305"	"1374.81456"	"-1.09"	"-0.00050"	"8/76"	"8"	"76"	"3839917.18212891"	"HCD"	"MS2"	"6.248743"	"154.9"	"100.000"	"49.0844"	"14473"	"14473"	"14447"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.6"	""	"177.7"	""	"193.6"	""	"283.9"	""	"315.3"	"325.1"	""	"866"	"29"	"36.000"	"29.000"	"0.0490329357280996"	"22"	"0.0006737"	"0.006733"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"458.94257"	"1374.81314"	"1374.81456"	"-1.03"	"-0.00047"	"9/76"	"9"	"76"	"116361895.791992"	"HCD"	"MS2"	"3.884218"	"372.0"	"9.432"	"45.7755"	"13119"	"13119"	"13103"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.5"	""	"345.6"	""	"386.6"	""	"742.0"	"8.8"	"855.0"	"824.5"	""	"866"	"35"	"36.000"	"29.000"	"0.0123733670528135"	"29"	"0.0006037"	"0.005363"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"687.91022"	"1374.81316"	"1374.81456"	"-1.02"	"-0.00070"	"10/76"	"10"	"76"	"125178.371765137"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"96.7282"	"33237"	"33237"	"33232"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.0"	""	"10.3"	""	"19.4"	""	"16.2"	""	"23.2"	"22.5"	""	"866"	"41"	"36.000"	"29.000"	"0.00331503330792574"	"23"	"0.0001889"	"0.0004796"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"687.91022"	"1374.81316"	"1374.81456"	"-1.02"	"-0.00070"	"6/76"	"6"	"76"	"129414.304626465"	"HCD"	"MS2"	"9.079963"	"10.5"	"100.000"	"100.4892"	"34286"	"34286"	"34282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.1"	""	"13.1"	""	"11.6"	""	"23.0"	""	"20.7"	"21.5"	""	"866"	"34"	"36.000"	"29.000"	"0.0188142927066291"	"23"	"0.0001889"	"0.0007356"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"687.91022"	"1374.81316"	"1374.81456"	"-1.02"	"-0.00070"	"8/76"	"8"	"76"	"120543.796630859"	"HCD"	"MS2"	"6.724957"	"9.0"	"100.000"	"113.4866"	"36645"	"36645"	"36642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.3"	""	"10.6"	""	"6.9"	""	"18.2"	""	"20.0"	"20.6"	""	"866"	"19"	"36.000"	"29.000"	"0.506393236311604"	"20"	"0.000494"	"0.002739"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.91022"	"1374.81316"	"1374.81456"	"-1.02"	"-0.00070"	"8/76"	"8"	"76"	"110336.262512207"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"112.9936"	"36581"	"36581"	"36579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"6.7"	""	"12.1"	""	"13.2"	""	"17.5"	"16.1"	""	"866"	"16"	"36.000"	"29.000"	"1.10531966405232"	"13"	"0.0008125"	"0.007691"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"687.91022"	"1374.81316"	"1374.81456"	"-1.02"	"-0.00070"	"10/76"	"10"	"76"	"146286.904785156"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"98.0275"	"33621"	"33621"	"33618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"10.5"	""	"12.9"	""	"21.0"	""	"21.9"	"22.3"	""	"866"	"31"	"36.000"	"29.000"	"0.0318777673215221"	"22"	"0.0002277"	"0.001357"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"687.91022"	"1374.81316"	"1374.81456"	"-1.02"	"-0.00070"	"6/76"	"6"	"76"	"134170.413208008"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"111.6146"	"36362"	"36362"	"36359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"10.8"	""	"8.0"	""	"17.3"	""	"14.6"	"20.4"	""	"866"	"28"	"36.000"	"29.000"	"0.0700628656299448"	"23"	"0.00103"	"0.01228"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"687.91022"	"1374.81316"	"1374.81456"	"-1.02"	"-0.00070"	"11/76"	"11"	"76"	"185268.838562012"	"HCD"	"MS2"	"5.915739"	"10.6"	"100.000"	"107.0979"	"35599"	"35599"	"35596"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.6"	""	"8.6"	""	"13.1"	""	"21.8"	""	"24.6"	"23.1"	""	"866"	"35"	"36.000"	"29.000"	"0.0136611700192121"	"20"	"0.0001889"	"0.0004934"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"687.91028"	"1374.81328"	"1374.81456"	"-0.93"	"-0.00064"	"10/76"	"10"	"76"	"126101.234436035"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"109.2082"	"35965"	"35965"	"35963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"7.4"	""	"11.2"	""	"17.6"	""	"22.1"	"15.7"	""	"866"	"35"	"36.000"	"29.000"	"0.0140762799767893"	"23"	"0.0001889"	"0.0003888"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.91028"	"1374.81328"	"1374.81456"	"-0.93"	"-0.00064"	"9/76"	"9"	"76"	"159865.395446777"	"HCD"	"MS2"	"37.86637"	"12.8"	"100.000"	"91.1354"	"31446"	"31446"	"31440"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.3"	""	"16.0"	""	"17.8"	""	"24.9"	""	"23.5"	"24.3"	""	"866"	"25"	"36.000"	"29.000"	"0.149447239132426"	"19"	"0.0002277"	"0.001275"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"687.91028"	"1374.81328"	"1374.81456"	"-0.93"	"-0.00064"	"7/76"	"7"	"76"	"1530477.98547363"	"HCD"	"MS2"	"57.43432"	"140.2"	"100.000"	"54.5713"	"16686"	"16686"	"16656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.3"	""	"197.6"	""	"187.5"	""	"231.0"	"1.7"	"258.1"	"263.1"	""	"866"	"53"	"36.000"	"29.000"	"0.000228290529996082"	""	"0"	"7.773E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.91034"	"1374.81340"	"1374.81456"	"-0.84"	"-0.00058"	"8/76"	"8"	"76"	"123908.749267578"	"HCD"	"MS2"	"6.288822"	"10.7"	"100.000"	"103.2020"	"34883"	"34883"	"34880"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.4"	""	"9.1"	""	"18.8"	""	"18.3"	""	"22.5"	"23.3"	""	"866"	"20"	"36.000"	"29.000"	"0.451323446927301"	"14"	"0.0005564"	"0.003537"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"687.91034"	"1374.81340"	"1374.81456"	"-0.84"	"-0.00058"	"14/76"	"14"	"76"	"1212273.06640625"	"HCD"	"MS2"	"0"	"107.4"	"100.000"	"54.3182"	"16636"	"16636"	"16605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.9"	""	"115.3"	""	"121.0"	""	"199.8"	"1.4"	"217.8"	"227.0"	""	"866"	"49"	"36.000"	"29.000"	"0.000581417228172695"	"25"	"0"	"5.581E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"458.94266"	"1374.81342"	"1374.81456"	"-0.83"	"-0.00038"	"8/76"	"8"	"76"	"123092911.583496"	"HCD"	"MS2"	"13.0464"	"673.4"	"16.590"	"45.4809"	"13052"	"13052"	"13035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"791.0"	""	"697.5"	""	"714.8"	""	"1431.6"	""	"1438.9"	"1326.7"	""	"866"	"27"	"36.000"	"29.000"	"0.0813744181675815"	"21"	"0.0009727"	"0.01042"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"458.94269"	"1374.81351"	"1374.81456"	"-0.76"	"-0.00035"	"8/76"	"8"	"76"	"14392483.8459473"	"HCD"	"MS2"	"5.844155"	"346.5"	"72.033"	"48.7191"	"14323"	"14323"	"14303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.2"	""	"358.1"	""	"379.2"	""	"648.4"	""	"763.6"	"768.6"	""	"866"	"24"	"36.000"	"29.000"	"0.181755640068106"	"19"	"0.0003839"	"0.001713"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"687.91040"	"1374.81352"	"1374.81456"	"-0.75"	"-0.00052"	"10/76"	"10"	"76"	"152869.151916504"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"97.8868"	"33580"	"33580"	"33574"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.8"	""	"12.7"	""	"13.1"	""	"24.8"	"1.8"	"23.9"	"20.0"	""	"866"	"21"	"36.000"	"29.000"	"0.307247173528148"	"18"	"0.0003839"	"0.001669"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"687.91046"	"1374.81365"	"1374.81456"	"-0.66"	"-0.00046"	"9/76"	"9"	"76"	"139398.239868164"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"99.0769"	"33913"	"33913"	"33908"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.1"	""	"12.7"	""	"12.8"	""	"24.3"	""	"19.0"	"25.3"	""	"866"	"20"	"36.000"	"29.000"	"0.458656863001766"	"15"	"0.0003839"	"0.001968"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"687.91046"	"1374.81365"	"1374.81456"	"-0.66"	"-0.00046"	"9/76"	"9"	"76"	"109891.09564209"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"112.7245"	"36541"	"36541"	"36538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"8.0"	""	"8.5"	""	"16.5"	""	"15.5"	"18.0"	""	"866"	"20"	"36.000"	"29.000"	"0.456549526137415"	"14"	"0.0006037"	"0.00412"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"687.91046"	"1374.81365"	"1374.81456"	"-0.66"	"-0.00046"	"9/76"	"9"	"76"	"144773.053710938"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"117.2691"	"37289"	"37289"	"37287"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.7"	""	"10.7"	""	"11.2"	""	"13.8"	""	"20.4"	"19.5"	""	"866"	"22"	"36.000"	"29.000"	"0.273204530159924"	"16"	"0.0003839"	"0.001713"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"687.91046"	"1374.81365"	"1374.81456"	"-0.66"	"-0.00046"	"10/76"	"10"	"76"	"283384.569152832"	"HCD"	"MS2"	"20.98729"	"25.8"	"100.000"	"80.2539"	"27149"	"27149"	"27121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.4"	""	"28.1"	""	"33.9"	""	"45.6"	""	"56.0"	"52.0"	""	"866"	"27"	"36.000"	"29.000"	"0.0832698718618099"	"23"	"0.0001889"	"0.0008632"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"687.91046"	"1374.81365"	"1374.81456"	"-0.66"	"-0.00046"	"13/76"	"13"	"76"	"21025099.8959961"	"HCD"	"MS2"	"16.50648"	"697.8"	"45.348"	"49.8293"	"14820"	"14820"	"14798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"558.9"	""	"508.4"	""	"713.0"	""	"863.6"	"5.5"	"2670.5"	"1367.3"	""	"866"	"43"	"36.000"	"29.000"	"0.00216514953645032"	""	"0.0001889"	"0.0004619"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"687.91052"	"1374.81377"	"1374.81456"	"-0.57"	"-0.00039"	"8/76"	"8"	"76"	"16839506.1834106"	"HCD"	"MS2"	"22.25766"	"1065.1"	"84.093"	"49.5515"	"14660"	"14660"	"14639"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"734.5"	""	"682.7"	""	"1008.8"	""	"1216.4"	""	"4538.9"	"2125.9"	""	"865"	"53"	"36.000"	"29.000"	"0.000241538359223679"	"28"	"0.0001308"	"0.0002389"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.91058"	"1374.81389"	"1374.81456"	"-0.49"	"-0.00033"	"5/76"	"5"	"76"	"112728.548828125"	"HCD"	"MS2"	"8.101404"	"8.6"	"100.000"	"103.5985"	"34971"	"34971"	"34967"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.8"	""	"7.8"	""	"13.9"	""	"17.3"	""	"21.1"	"14.6"	""	"847"	"29"	"36.000"	"29.000"	"0.0529484699297204"	"14"	"0.0001889"	"0.000595"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"687.91058"	"1374.81389"	"1374.81456"	"-0.49"	"-0.00033"	"14/76"	"14"	"76"	"12988937.5871582"	"HCD"	"MS2"	"14.63785"	"908.4"	"100.000"	"47.5538"	"13894"	"13894"	"13874"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"403.9"	""	"357.2"	""	"757.8"	""	"956.6"	""	"4638.9"	"1710.4"	""	"847"	"50"	"36.000"	"29.000"	"0.000415770253868964"	"24"	"0.0001308"	"0.0003061"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.91064"	"1374.81401"	"1374.81456"	"-0.40"	"-0.00027"	"8/76"	"8"	"76"	"201982.237304688"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"106.7516"	"35539"	"35539"	"35534"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.9"	""	"12.4"	""	"12.4"	""	"13.6"	""	"28.3"	"19.4"	""	"847"	"25"	"36.000"	"29.000"	"0.129973081208366"	"19"	"0.0006037"	"0.005059"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"687.91064"	"1374.81401"	"1374.81456"	"-0.40"	"-0.00027"	"6/76"	"6"	"76"	"349484.564147949"	"HCD"	"MS2"	"29.87529"	"25.8"	"100.000"	"83.4654"	"28459"	"28459"	"28430"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.2"	""	"29.0"	""	"30.1"	""	"47.5"	"0.5"	"59.3"	"53.3"	""	"847"	"26"	"36.000"	"29.000"	"0.11935851713905"	"23"	"0.0003839"	"0.001876"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"458.94287"	"1374.81406"	"1374.81456"	"-0.36"	"-0.00017"	"8/76"	"8"	"76"	"3418358.07403564"	"HCD"	"MS2"	"4.067818"	"163.0"	"100.000"	"47.6823"	"13947"	"13947"	"13922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.6"	""	"107.4"	""	"153.4"	""	"189.7"	"4.2"	"685.0"	"314.3"	""	"847"	"28"	"36.000"	"29.000"	"0.068841989806033"	"22"	"0.0008453"	"0.008065"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"458.94287"	"1374.81406"	"1374.81456"	"-0.36"	"-0.00017"	"8/76"	"8"	"76"	"260570835.762695"	"HCD"	"MS2"	"3.475798"	"538.8"	"6.089"	"48.0870"	"14065"	"14065"	"14050"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"552.1"	""	"544.1"	""	"616.0"	""	"1073.5"	"2.2"	"1181.5"	"1154.1"	""	"847"	"29"	"36.000"	"29.000"	"0.0545573685142042"	"22"	"0.001125"	"0.01517"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"458.94287"	"1374.81406"	"1374.81456"	"-0.36"	"-0.00017"	"9/76"	"9"	"76"	"3879282.61242676"	"HCD"	"MS2"	"26.99875"	"158.8"	"100.000"	"49.3687"	"14637"	"14637"	"14606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.4"	""	"176.6"	""	"185.3"	""	"305.5"	"4.1"	"330.2"	"322.4"	""	"847"	"22"	"36.000"	"29.000"	"0.262333295295017"	"18"	"0.00103"	"0.01144"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"687.91071"	"1374.81413"	"1374.81456"	"-0.31"	"-0.00021"	"8/76"	"8"	"76"	"142087.244995117"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"98.8674"	"33850"	"33850"	"33845"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.0"	""	"10.7"	""	"14.0"	""	"19.5"	""	"27.9"	"23.1"	""	"847"	"22"	"36.000"	"29.000"	"0.270927702826901"	"17"	"0.0007076"	"0.007068"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"458.94290"	"1374.81415"	"1374.81456"	"-0.30"	"-0.00014"	"8/76"	"8"	"76"	"53961152.2473145"	"HCD"	"MS2"	"4.18972"	"530.2"	"28.509"	"48.4038"	"14194"	"14194"	"14176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"589.1"	""	"538.5"	""	"591.8"	""	"1077.3"	"2.5"	"1124.4"	"1115.4"	""	"847"	"27"	"36.000"	"29.000"	"0.0779566942622102"	"21"	"0.000523"	"0.002989"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"458.94293"	"1374.81424"	"1374.81456"	"-0.23"	"-0.00010"	"8/76"	"8"	"76"	"77499649.7502441"	"HCD"	"MS2"	"7.112247"	"1251.1"	"48.662"	"48.0594"	"14101"	"14101"	"14082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1362.7"	""	"1314.4"	""	"1411.7"	""	"2664.7"	""	"2614.9"	"2519.8"	""	"847"	"25"	"36.000"	"29.000"	"0.143170458133233"	"20"	"0.0004166"	"0.002145"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"687.91077"	"1374.81426"	"1374.81456"	"-0.22"	"-0.00015"	"7/76"	"7"	"76"	"8376979.53570557"	"HCD"	"MS2"	"7.986965"	"533.8"	"88.989"	"49.1856"	"14514"	"14514"	"14495"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"612.3"	""	"583.2"	""	"648.2"	""	"1058.8"	"7.3"	"1093.3"	"1065.4"	""	"847"	"42"	"36.000"	"29.000"	"0.00259330390895441"	"22"	"0.0001308"	"0.0002581"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"687.91083"	"1374.81438"	"1374.81456"	"-0.13"	"-0.00009"	"7/76"	"7"	"76"	"8956780.29724121"	"HCD"	"MS2"	"15.7579"	"581.9"	"88.913"	"49.4766"	"14677"	"14677"	"14654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"660.4"	""	"652.1"	""	"689.1"	""	"1178.4"	"4.4"	"1156.3"	"1184.4"	""	"853"	"41"	"36.000"	"29.000"	"0.00376633577528517"	"21"	"0.0001308"	"0.0002555"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"458.94299"	"1374.81443"	"1374.81456"	"-0.10"	"-0.00004"	"8/76"	"8"	"76"	"110362528.328613"	"HCD"	"MS2"	"6.064928"	"1377.8"	"34.816"	"47.7980"	"13946"	"13946"	"13928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1477.0"	""	"1446.7"	""	"1552.5"	""	"2908.0"	""	"2933.6"	"2791.8"	""	"861"	"26"	"36.000"	"29.000"	"0.11480826550765"	"20"	"0.0003571"	"0.001494"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"687.91089"	"1374.81450"	"1374.81456"	"-0.04"	"-0.00003"	"6/76"	"6"	"76"	"131624.681274414"	"HCD"	"MS2"	"14.08894"	"11.8"	"100.000"	"90.3676"	"31173"	"31173"	"31161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.8"	""	"15.9"	""	"15.7"	""	"24.2"	""	"24.5"	"19.8"	""	"861"	"38"	"36.000"	"29.000"	"0.00628019539048538"	"21"	"0.0001859"	"0.0003514"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"687.91089"	"1374.81450"	"1374.81456"	"-0.04"	"-0.00003"	"14/76"	"14"	"76"	"12751696.9696045"	"HCD"	"MS2"	"10.69241"	"893.1"	"100.000"	"47.2921"	"13739"	"13739"	"13720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"358.5"	""	"356.7"	""	"706.6"	""	"902.3"	""	"4624.7"	"1735.1"	""	"861"	"46"	"36.000"	"29.000"	"0.000965991168188482"	"23"	"0.0001308"	"0.0002287"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"458.94302"	"1374.81452"	"1374.81456"	"-0.03"	"-0.00001"	"8/76"	"8"	"76"	"85306103.2629395"	"HCD"	"MS2"	"4.082181"	"446.8"	"15.928"	"48.6763"	"14353"	"14353"	"14335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"533.1"	""	"445.4"	""	"495.9"	""	"913.5"	""	"956.8"	"902.9"	""	"861"	"27"	"36.000"	"29.000"	"0.0774413928962944"	"22"	"0.000523"	"0.002835"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"458.94305"	"1374.81461"	"1374.81456"	"0.04"	"0.00002"	"9/76"	"9"	"76"	"14254171.399292"	"HCD"	"MS2"	"5.489738"	"412.8"	"83.279"	"48.9914"	"14482"	"14482"	"14463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"449.4"	""	"443.3"	""	"473.3"	""	"789.5"	""	"889.2"	"882.0"	""	"857"	"25"	"36.000"	"29.000"	"0.14857674041891"	"19"	"0.0003839"	"0.002032"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"687.91101"	"1374.81474"	"1374.81456"	"0.14"	"0.00009"	"10/76"	"10"	"76"	"278870.069824219"	"HCD"	"MS2"	"22.50975"	"26.0"	"100.000"	"80.2954"	"27166"	"27166"	"27137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.5"	""	"30.5"	""	"29.9"	""	"48.1"	""	"54.8"	"52.3"	""	"857"	"30"	"36.000"	"29.000"	"0.0408273156284134"	"19"	"0.0001889"	"0.0007021"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"687.91119"	"1374.81511"	"1374.81456"	"0.40"	"0.00028"	"10/76"	"10"	"76"	"150154.422973633"	"HCD"	"MS2"	"10.28563"	"11.4"	"100.000"	"95.3542"	"32835"	"32835"	"32831"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"13.4"	""	"15.8"	""	"22.9"	""	"24.1"	"22.3"	""	"857"	"39"	"36.000"	"29.000"	"0.00602491364089667"	"24"	"0.0001889"	"0.0005961"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"687.91119"	"1374.81511"	"1374.81456"	"0.40"	"0.00028"	"14/76"	"14"	"76"	"260054042.845703"	"HCD"	"MS2"	"0"	"1938.1"	"10.928"	"48.0527"	"14099"	"14099"	"14082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2150.1"	""	"2027.8"	""	"2166.7"	""	"4178.4"	""	"4001.4"	"3932.3"	""	"857"	"50"	"36.000"	"29.000"	"0.000432464861683859"	"24"	"0.0002277"	"0.001233"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"687.91125"	"1374.81523"	"1374.81456"	"0.49"	"0.00034"	"7/76"	"7"	"76"	"1930474602.59375"	"HCD"	"MS2"	"0"	"639.7"	"0.477"	"45.6846"	"13135"	"13135"	"13122"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"775.2"	""	"606.9"	""	"680.9"	""	"1297.3"	""	"1380.6"	"1342.0"	""	"850"	"46"	"36.000"	"29.000"	"0.0011813781387977"	"23"	"0.00103"	"0.01116"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"687.91132"	"1374.81536"	"1374.81456"	"0.58"	"0.00040"	"14/76"	"14"	"76"	"89691386.9492188"	"HCD"	"MS2"	"0"	"433.9"	"6.718"	"48.6706"	"14304"	"14304"	"14287"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"504.6"	""	"407.1"	""	"491.2"	""	"859.3"	"1.5"	"938.6"	"922.5"	""	"849"	"50"	"36.000"	"29.000"	"0.000386258184232391"	"25"	"0.0001889"	"0.0009081"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"687.91138"	"1374.81548"	"1374.81456"	"0.67"	"0.00046"	"7/76"	"7"	"76"	"810972999.171875"	"HCD"	"MS2"	"0.06120129"	"391.4"	"0.737"	"45.7388"	"13104"	"13104"	"13091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"419.0"	""	"353.2"	""	"420.9"	""	"803.8"	"0.6"	"866.5"	"858.7"	""	"849"	"46"	"36.000"	"29.000"	"0.00116648106799197"	"23"	"0.0006037"	"0.004805"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"687.91138"	"1374.81548"	"1374.81456"	"0.67"	"0.00046"	"14/76"	"14"	"76"	"58210208.1196289"	"HCD"	"MS2"	"0.3237477"	"449.6"	"11.931"	"48.9847"	"14480"	"14480"	"14463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"512.2"	""	"471.8"	""	"521.3"	""	"878.0"	""	"946.5"	"943.7"	""	"849"	"50"	"36.000"	"29.000"	"0.0003818367233595"	"25"	"0.0001889"	"0.0005827"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"687.91138"	"1374.81548"	"1374.81456"	"0.67"	"0.00046"	"14/76"	"14"	"76"	"963661375.082031"	"HCD"	"MS2"	"0"	"694.2"	"0.981"	"48.3665"	"14227"	"14227"	"14211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"729.9"	""	"674.8"	""	"768.6"	""	"1429.3"	"6.4"	"1501.7"	"1489.8"	""	"849"	"50"	"36.000"	"29.000"	"0.00041198148109571"	"24"	"0.0006037"	"0.004707"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"687.91150"	"1374.81572"	"1374.81456"	"0.85"	"0.00058"	"14/76"	"14"	"76"	"91580858.0222168"	"HCD"	"MS2"	"0"	"2733.7"	"42.970"	"47.7545"	"13929"	"13929"	"13912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3009.8"	""	"2913.1"	""	"3096.7"	""	"5892.4"	""	"5748.1"	"5505.3"	""	"848"	"50"	"36.000"	"29.000"	"0.000450158916252259"	"24"	"0.0001889"	"0.0007638"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"687.91156"	"1374.81584"	"1374.81456"	"0.94"	"0.00064"	"14/76"	"14"	"76"	"297856022.425781"	"HCD"	"MS2"	"0.2521405"	"790.4"	"4.179"	"48.6719"	"14352"	"14352"	"14335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"915.7"	""	"824.2"	""	"870.5"	""	"1612.3"	"3.5"	"1667.6"	"1615.9"	""	"848"	"50"	"36.000"	"29.000"	"0.000378761525102917"	"25"	"0.0003839"	"0.002064"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"687.91162"	"1374.81597"	"1374.81456"	"1.02"	"0.00070"	"7/76"	"7"	"76"	"1920973878.07813"	"HCD"	"MS2"	"0.0215445"	"658.8"	"0.494"	"45.4503"	"12989"	"12989"	"12980"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"759.7"	""	"599.9"	""	"694.4"	""	"1352.1"	"3.0"	"1464.7"	"1390.9"	""	"848"	"46"	"36.000"	"29.000"	"0.00116510712091542"	"23"	"0.001058"	"0.01338"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"687.91187"	"1374.81645"	"1374.81456"	"1.38"	"0.00095"	"14/76"	"14"	"76"	"243498085.201172"	"HCD"	"MS2"	"0.2397266"	"696.5"	"4.088"	"48.3602"	"14177"	"14177"	"14160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"766.1"	""	"714.1"	""	"775.4"	""	"1384.1"	"2.0"	"1505.5"	"1473.6"	""	"841"	"50"	"36.000"	"29.000"	"0.000391530861634222"	"25"	"0.0003839"	"0.001603"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"687.91193"	"1374.81658"	"1374.81456"	"1.47"	"0.00101"	"14/76"	"14"	"76"	"1006750883.65625"	"HCD"	"MS2"	"0.09303063"	"544.0"	"0.816"	"45.9755"	"13250"	"13250"	"13237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"599.4"	""	"490.1"	""	"561.4"	""	"1118.3"	"4.0"	"1183.9"	"1217.0"	""	"842"	"53"	"36.000"	"29.000"	"0.000216911259368919"	"25"	"0.0006037"	"0.005401"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"687.91193"	"1374.81658"	"1374.81456"	"1.47"	"0.00101"	"14/76"	"14"	"76"	"974744300.242188"	"HCD"	"MS2"	"0"	"620.9"	"0.892"	"48.0526"	"14051"	"14051"	"14037"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"646.9"	""	"613.5"	""	"701.2"	""	"1265.1"	""	"1326.3"	"1353.7"	""	"842"	"50"	"36.000"	"29.000"	"0.000408584696210351"	"24"	"0.0008453"	"0.007914"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"687.91229"	"1374.81731"	"1374.81456"	"2.00"	"0.00138"	"10/76"	"10"	"76"	"312946.75579834"	"HCD"	"MS2"	"23.39576"	"18.8"	"100.000"	"95.0977"	"32765"	"32765"	"32759"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.9"	""	"20.2"	""	"25.0"	""	"36.2"	""	"35.7"	"39.5"	""	"838"	"14"	"36.000"	"29.000"	"1.61515431861958"	"24"	"0.0006037"	"0.004528"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"687.92047"	"1374.83367"	"1374.83569"	"-1.47"	"-0.00101"	"8/78"	"8"	"78"	"3233420.77319336"	"HCD"	"MS2"	"30.21126"	"222.6"	"100.000"	"34.6964"	"8601"	"8601"	"8574"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.1"	""	"308.4"	""	"340.7"	""	"313.4"	""	"378.2"	"389.6"	""	"779"	"57"	"35.000"	"28.000"	"8.30820993670591E-05"	"28"	"0"	"9.713E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"687.92096"	"1374.83464"	"1374.83569"	"-0.76"	"-0.00052"	"14/78"	"14"	"78"	"2200935.48388672"	"HCD"	"MS2"	"21.08412"	"151.8"	"100.000"	"34.8112"	"8691"	"8691"	"8666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"262.1"	""	"202.0"	""	"213.3"	""	"227.3"	""	"266.0"	"266.0"	""	"779"	"47"	"35.000"	"28.000"	"0.000728630693672478"	"27"	"0"	"8.986E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"687.92102"	"1374.83476"	"1374.81456"	"14.70"	"0.01010"	"7/76"	"7"	"76"	"2586302.73071289"	"HCD"	"MS2"	"33.5486"	"167.4"	"100.000"	"56.5487"	"17548"	"17548"	"17525"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.3"	""	"202.4"	""	"212.2"	""	"266.2"	"0.0"	"351.7"	"357.9"	""	"789"	"15"	"35.000"	"28.000"	"1.18316961374063"	"25"	"0.002456"	"0.03713"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGk.[V]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"687.92102"	"1374.83476"	"1374.81456"	"14.70"	"0.01010"	"10/76"	"10"	"76"	"2647744.92834473"	"HCD"	"MS2"	"8.008965"	"188.7"	"100.000"	"56.4378"	"17449"	"17449"	"17419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"256.4"	""	"214.7"	""	"243.2"	""	"305.1"	"4.8"	"379.9"	"386.6"	""	"789"	"17"	"35.000"	"28.000"	"0.841486218236324"	"22"	"0.0008731"	"0.009212"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPIMLLK"	"[K].sDPIMLLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"687.92474"	"1374.84221"	"1374.84308"	"-0.63"	"-0.00043"	"8/58"	"8"	"58"	"5273953.76300049"	"HCD"	"MS2"	"33.6698"	"386.0"	"100.000"	"56.8852"	"17686"	"17686"	"17669"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"543.6"	""	"463.6"	""	"506.9"	""	"494.9"	"1.3"	"783.6"	"871.1"	""	"714"	"32"	"35.000"	"28.000"	"0.0226813142671073"	"24"	"0.0002277"	"0.001194"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPIMLLK"	"[K].sDPIMLLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"687.92542"	"1374.84355"	"1374.84308"	"0.34"	"0.00024"	"8/58"	"8"	"58"	"5650296.59130859"	"HCD"	"MS2"	"24.01261"	"402.4"	"100.000"	"56.7288"	"17567"	"17567"	"17547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"542.2"	""	"471.6"	""	"505.3"	""	"475.0"	"1.5"	"859.5"	"969.2"	""	"655"	"32"	"35.000"	"28.000"	"0.0189326455525373"	"21"	"0.0001889"	"0.0006486"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVTAQDVR"	"[K].kVTAQDVR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"458.95316"	"1374.84491"	"1374.84692"	"-1.46"	"-0.00067"	"7/76"	"7"	"76"	"9717422.65777588"	"HCD"	"MS2"	"48.1554"	"615.7"	"100.000"	"24.7311"	"4589"	"4589"	"4571"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"906.4"	""	"800.0"	""	"817.3"	""	"1013.2"	""	"1102.8"	"1200.5"	""	"708"	"14"	"35.000"	"28.000"	"1.32435148248307"	"13"	"0.0009727"	"0.01061"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVTAQDVR"	"[K].kVTAQDVR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"687.92627"	"1374.84526"	"1374.84692"	"-1.21"	"-0.00083"	"6/76"	"6"	"76"	"661430.461730957"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"24.7679"	"4604"	"4604"	"4581"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.4"	""	"41.8"	""	"43.1"	""	"58.1"	"0.9"	"72.3"	"67.1"	""	"707"	"32"	"35.000"	"28.000"	"0.0223043421273748"	"22"	"0.0005564"	"0.003391"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGSLLADGR"	"[K].kGSLLADGR.[Q]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.92633"	"1374.84538"	"1374.84692"	"-1.12"	"-0.00077"	"7/88"	"7"	"88"	"2313161.06018066"	"HCD"	"MS2"	"0"	"135.9"	"100.000"	"29.3994"	"6445"	"6445"	"6422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.2"	""	"201.8"	""	"160.8"	""	"222.9"	""	"258.8"	"231.3"	""	"707"	"33"	"35.000"	"28.000"	"0.0193815907099522"	"15"	"0.0005564"	"0.003381"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGSLLADGR"	"[K].kGSLLADGR.[Q]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"458.95337"	"1374.84555"	"1374.84692"	"-0.99"	"-0.00046"	"12/88"	"12"	"88"	"26913265.1434326"	"HCD"	"MS2"	"48.66539"	"877.4"	"55.766"	"29.4413"	"6503"	"6503"	"6484"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1303.0"	""	"1285.2"	""	"1050.7"	""	"1398.8"	"1.2"	"1720.1"	"1557.1"	""	"706"	"6"	"35.000"	"28.000"	"9.3923594610898"	"13"	"0.0002277"	"0.00119"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVTAQDVR"	"[K].kVTAQDVR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"687.92670"	"1374.84612"	"1374.84692"	"-0.58"	"-0.00040"	"6/76"	"6"	"76"	"507654.599853516"	"HCD"	"MS2"	"0"	"29.6"	"100.000"	"24.8314"	"4665"	"4665"	"4640"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.3"	""	"36.1"	""	"38.9"	""	"51.8"	"0.3"	"50.4"	"55.1"	""	"703"	"30"	"35.000"	"28.000"	"0.0317632790013389"	"17"	"0.00109"	"0.01489"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGSLLADGR"	"[K].kGSLLADGR.[Q]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.92688"	"1374.84648"	"1374.84692"	"-0.32"	"-0.00022"	"6/88"	"6"	"88"	"2502089.47351074"	"HCD"	"MS2"	"0"	"145.6"	"100.000"	"29.4459"	"6505"	"6505"	"6484"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.0"	""	"228.9"	""	"166.6"	""	"224.8"	"0.3"	"270.8"	"244.9"	""	"703"	"28"	"35.000"	"28.000"	"0.0591459932466269"	"14"	"0.0007793"	"0.00744"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVTAQDVR"	"[K].kVTAQDVR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"458.95374"	"1374.84665"	"1374.84692"	"-0.19"	"-0.00009"	"7/76"	"7"	"76"	"9646130.45227051"	"HCD"	"MS2"	"41.90316"	"610.0"	"100.000"	"24.7924"	"4649"	"4649"	"4627"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"872.9"	""	"767.8"	""	"788.1"	""	"970.1"	""	"1164.2"	"1227.6"	""	"703"	"15"	"35.000"	"28.000"	"1.06641275124429"	"13"	"0.0006037"	"0.005121"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNVSSSVSLR"	"[R].vVNVSSSVSLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"688.40881"	"1375.81035"	"1375.81064"	"-0.21"	"-0.00015"	"10/104"	"10"	"104"	"1505846.65289307"	"HCD"	"MS2"	"39.06538"	"107.7"	"100.000"	"39.0766"	"10442"	"10442"	"10414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.2"	""	"164.7"	""	"155.8"	""	"177.5"	"4.4"	"177.4"	"196.3"	""	"996"	"54"	"36.000"	"29.000"	"0.000177104396647355"	"29"	"0"	"1.053E-05"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNVSSSVSLR"	"[R].vVNVSSSVSLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"688.40955"	"1375.81182"	"1375.81064"	"0.85"	"0.00059"	"10/104"	"10"	"104"	"1189677.03796387"	"HCD"	"MS2"	"47.25052"	"88.8"	"100.000"	"38.9974"	"10366"	"10366"	"10342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.6"	""	"129.4"	""	"125.6"	""	"149.6"	"3.6"	"146.2"	"151.7"	""	"954"	"63"	"36.000"	"29.000"	"2.36329741013885E-05"	"28"	"0"	"2.474E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"688.41229"	"1375.81731"	"1375.81970"	"-1.74"	"-0.00120"	"8/70"	"8"	"70"	"3436617.41241455"	"HCD"	"MS2"	"0"	"311.6"	"100.000"	"38.2632"	"10108"	"10108"	"10081"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"500.4"	""	"399.3"	""	"454.3"	""	"469.2"	""	"532.5"	"597.7"	""	"931"	"54"	"36.000"	"29.000"	"0.000198572766002141"	"26"	"0"	"0.0001622"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"688.41278"	"1375.81828"	"1375.81970"	"-1.03"	"-0.00071"	"8/70"	"8"	"70"	"3589383.1494751"	"HCD"	"MS2"	"10.50473"	"312.0"	"100.000"	"38.1496"	"10018"	"10018"	"9991"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"533.0"	""	"397.6"	""	"449.2"	""	"476.4"	"0.6"	"502.1"	"592.8"	""	"930"	"54"	"36.000"	"29.000"	"0.00017883517865109"	"26"	"7.476E-05"	"0.000196"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISSIEQK"	"[R].iISSIEQk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"688.43140"	"1375.85552"	"1375.85609"	"-0.41"	"-0.00029"	"7/64"	"7"	"64"	"13401013.9943237"	"HCD"	"MS2"	"10.72261"	"693.1"	"74.222"	"42.5215"	"11848"	"11848"	"11827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"892.8"	""	"782.6"	""	"908.3"	""	"1179.7"	"2.8"	"1378.1"	"1433.3"	""	"603"	"41"	"34.000"	"27.000"	"0.00230296488748674"	"26"	"0.0001889"	"0.0009182"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISSIEQK"	"[R].iISSIEQk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"459.29019"	"1375.85602"	"1375.85609"	"-0.05"	"-0.00002"	"6/64"	"6"	"64"	"6708694.46295166"	"HCD"	"MS2"	"23.7291"	"291.5"	"100.000"	"42.5585"	"11863"	"11863"	"11843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"411.5"	""	"379.6"	""	"395.4"	""	"468.4"	""	"539.3"	"572.7"	""	"603"	"29"	"34.000"	"27.000"	"0.0383078092720375"	"21"	"0.000523"	"0.003044"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISSIEQK"	"[R].iISSIEQk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"459.29022"	"1375.85611"	"1375.85609"	"0.02"	"0.00001"	"7/64"	"7"	"64"	"3881806.60229492"	"HCD"	"MS2"	"21.61976"	"192.9"	"100.000"	"42.4375"	"11770"	"11770"	"11740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.6"	""	"249.7"	""	"273.5"	""	"309.3"	""	"358.5"	"379.4"	""	"603"	"16"	"34.000"	"27.000"	"0.748664631246614"	"17"	"0.0005564"	"0.003491"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISSIEQK"	"[R].iISSIEQk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"688.43176"	"1375.85625"	"1375.85609"	"0.12"	"0.00008"	"6/64"	"6"	"64"	"13173431.8708496"	"HCD"	"MS2"	"9.647225"	"669.8"	"68.647"	"42.2948"	"11711"	"11711"	"11692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"850.8"	""	"765.0"	""	"877.0"	""	"1135.8"	""	"1330.9"	"1405.4"	""	"603"	"42"	"34.000"	"27.000"	"0.00187623535978501"	"23"	"0.0001889"	"0.001076"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAILTTMLATR"	"[K].gAILTTMLATR.[N]"	"N-Term(TMT6plex)"	"1"	"3"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P11275; P15791; P08413"	"Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Rattus norvegicus OX=10116 GN=Camk2a PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus OX=10116 GN=Camk2b PE=1 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"688.90948"	"1376.81169"	"1376.81329"	"-1.16"	"-0.00080"	"10/90"	"10"	"90"	"2017543.19842529"	"HCD"	"MS2"	"18.01131"	"147.9"	"100.000"	"54.7638"	"16818"	"16818"	"16789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.4"	""	"182.9"	""	"193.6"	""	"223.7"	""	"292.8"	"302.5"	""	"726"	"53"	"35.000"	"28.000"	"0.000182350359996627"	"23"	"0"	"1.095E-05"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAILTTMLATR"	"[K].gAILTTMLATR.[N]"	"N-Term(TMT6plex)"	"1"	"3"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P11275; P15791; P08413"	"Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Rattus norvegicus OX=10116 GN=Camk2a PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus OX=10116 GN=Camk2b PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"688.91071"	"1376.81413"	"1376.81329"	"0.62"	"0.00042"	"8/90"	"8"	"90"	"2219481.59466553"	"HCD"	"MS2"	"0"	"145.5"	"100.000"	"55.0695"	"16943"	"16943"	"16917"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.3"	""	"183.2"	""	"191.7"	""	"211.8"	"0.3"	"301.4"	"289.3"	""	"700"	"54"	"35.000"	"28.000"	"0.000126202525057575"	"28"	"0"	"1.781E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAILTTMLATR"	"[K].gAILTTMLATR.[N]"	"N-Term(TMT6plex)"	"1"	"3"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P11275; P15791; P08413"	"Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Rattus norvegicus OX=10116 GN=Camk2a PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus OX=10116 GN=Camk2b PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"688.91174"	"1376.81621"	"1376.81329"	"2.12"	"0.00146"	"8/90"	"8"	"90"	"2253002.73443604"	"HCD"	"MS2"	"9.942896"	"150.5"	"100.000"	"54.6841"	"16732"	"16732"	"16704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.7"	""	"188.4"	""	"196.4"	""	"228.1"	""	"291.7"	"324.8"	""	"679"	"50"	"35.000"	"28.000"	"0.000340282628327446"	"22"	"0"	"2.423E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"459.61414"	"1376.82785"	"1376.83021"	"-1.71"	"-0.00078"	"10/68"	"10"	"68"	"344263428.321289"	"HCD"	"MS2"	"9.010439"	"499.4"	"4.335"	"46.0925"	"13297"	"13297"	"13284"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"539.8"	""	"482.8"	""	"512.3"	""	"1117.9"	""	"1059.1"	"1045.5"	""	"644"	"32"	"35.000"	"28.000"	"0.0200380691824469"	"20"	"0.0006037"	"0.00466"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"459.61429"	"1376.82831"	"1376.83021"	"-1.38"	"-0.00063"	"10/68"	"10"	"68"	"340215322.612305"	"HCD"	"MS2"	"9.930506"	"645.4"	"5.845"	"45.8512"	"13150"	"13150"	"13133"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"701.6"	""	"607.4"	""	"644.0"	""	"1447.8"	""	"1383.6"	"1355.3"	""	"641"	"30"	"35.000"	"28.000"	"0.0321238828803967"	"19"	"0.0006037"	"0.004304"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"459.61435"	"1376.82849"	"1376.83021"	"-1.24"	"-0.00057"	"6/68"	"6"	"68"	"14393379.7651978"	"HCD"	"MS2"	"10.44385"	"382.4"	"70.665"	"46.7831"	"13531"	"13531"	"13512"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"423.8"	""	"411.0"	""	"453.9"	""	"694.1"	""	"824.5"	"828.9"	""	"630"	"23"	"34.000"	"27.000"	"0.152865877551068"	"18"	"0.0004166"	"0.002154"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"688.91791"	"1376.82854"	"1376.83021"	"-1.21"	"-0.00083"	"14/68"	"14"	"68"	"791556755.296875"	"HCD"	"MS2"	"0.03535029"	"962.0"	"1.617"	"46.1314"	"13313"	"13313"	"13296"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1050.4"	""	"956.8"	""	"1010.1"	""	"2064.2"	"7.9"	"2036.1"	"2017.4"	""	"625"	"49"	"34.000"	"27.000"	"0.000377441823470869"	"19"	"0.0008125"	"0.007528"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"459.61438"	"1376.82859"	"1376.83021"	"-1.18"	"-0.00054"	"6/68"	"6"	"68"	"3987448.19598389"	"HCD"	"MS2"	"42.7014"	"158.3"	"100.000"	"47.4648"	"13810"	"13810"	"13784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.5"	""	"146.5"	""	"193.0"	""	"272.2"	"3.7"	"398.5"	"314.4"	""	"623"	"29"	"34.000"	"27.000"	"0.0414436551200175"	"22"	"0.0002277"	"0.00129"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"688.91827"	"1376.82927"	"1376.83021"	"-0.68"	"-0.00047"	"14/68"	"14"	"68"	"17346313.0091553"	"HCD"	"MS2"	"1.880829"	"626.8"	"49.702"	"46.8155"	"13545"	"13545"	"13528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"645.9"	""	"579.4"	""	"647.8"	""	"1333.0"	"0.4"	"1385.1"	"1370.7"	""	"624"	"49"	"34.000"	"27.000"	"0.000389183656443798"	"22"	"0.0001889"	"0.0003832"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"688.91846"	"1376.82964"	"1376.83021"	"-0.41"	"-0.00028"	"13/68"	"13"	"68"	"837056071.320313"	"HCD"	"MS2"	"0"	"731.0"	"1.182"	"45.8902"	"13166"	"13166"	"13149"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"790.3"	""	"709.7"	""	"791.9"	""	"1603.1"	""	"1543.6"	"1509.0"	""	"590"	"42"	"34.000"	"27.000"	"0.00177755077891935"	"18"	"0.0007444"	"0.007203"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"688.91846"	"1376.82964"	"1376.83021"	"-0.41"	"-0.00028"	"14/68"	"14"	"68"	"16587637.2718506"	"HCD"	"MS2"	"1.722785"	"806.4"	"67.823"	"47.0814"	"13701"	"13701"	"13682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"846.8"	""	"732.9"	""	"863.0"	""	"1675.3"	""	"1767.0"	"1786.0"	""	"590"	"49"	"34.000"	"27.000"	"0.000369676646607717"	"20"	"0.0001889"	"0.0004598"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"459.61493"	"1376.83023"	"1376.83021"	"0.02"	"0.00001"	"6/68"	"6"	"68"	"17152582.7990723"	"HCD"	"MS2"	"5.941524"	"459.4"	"75.221"	"47.0010"	"13668"	"13668"	"13650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"490.3"	""	"481.3"	""	"493.1"	""	"895.7"	""	"998.2"	"1011.2"	""	"606"	"29"	"34.000"	"27.000"	"0.0399431791782591"	"19"	"0.0006037"	"0.003818"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"688.91882"	"1376.83037"	"1376.83021"	"0.12"	"0.00008"	"13/68"	"13"	"68"	"1027420163.49219"	"HCD"	"MS2"	"0.0865762"	"570.2"	"0.759"	"46.1906"	"13289"	"13289"	"13272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"579.3"	""	"526.0"	""	"621.8"	""	"1217.3"	"6.4"	"1241.1"	"1230.9"	""	"606"	"44"	"34.000"	"27.000"	"0.00118697788763658"	"19"	"0.0007076"	"0.006871"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"459.61505"	"1376.83060"	"1376.83021"	"0.29"	"0.00013"	"10/68"	"10"	"68"	"592458874.164063"	"HCD"	"MS2"	"4.254585"	"512.0"	"2.651"	"46.1516"	"13273"	"13273"	"13260"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"492.5"	""	"470.4"	""	"528.6"	""	"1114.6"	""	"1136.6"	"1130.6"	""	"606"	"36"	"34.000"	"27.000"	"0.00804345485278588"	"21"	"0.0007444"	"0.007205"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"688.91895"	"1376.83061"	"1376.83021"	"0.30"	"0.00020"	"7/68"	"7"	"68"	"8703773.02935791"	"HCD"	"MS2"	"0"	"661.1"	"100.000"	"47.4777"	"13863"	"13863"	"13842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"704.2"	""	"657.5"	""	"731.7"	""	"1190.7"	""	"1623.7"	"1389.3"	""	"606"	"36"	"34.000"	"27.000"	"0.00842253120131063"	"20"	"0.0001308"	"0.0003131"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"459.61508"	"1376.83069"	"1376.83021"	"0.35"	"0.00016"	"6/68"	"6"	"68"	"320163853.09668"	"HCD"	"MS2"	"4.210154"	"411.0"	"3.898"	"46.6840"	"13539"	"13539"	"13522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.3"	""	"358.8"	""	"428.8"	""	"902.8"	""	"908.1"	"924.9"	""	"606"	"29"	"34.000"	"27.000"	"0.0368504358195849"	"20"	"0.001058"	"0.01426"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"459.61508"	"1376.83069"	"1376.83021"	"0.35"	"0.00016"	"10/68"	"10"	"68"	"535462387.664063"	"HCD"	"MS2"	"4.50942"	"455.0"	"2.492"	"46.3789"	"13414"	"13414"	"13404"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"447.1"	""	"415.3"	""	"454.3"	""	"1023.7"	"1.7"	"1012.7"	"974.0"	""	"606"	"30"	"34.000"	"27.000"	"0.0300914162671543"	"19"	"0.0006396"	"0.006306"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"459.61517"	"1376.83097"	"1376.83021"	"0.55"	"0.00025"	"6/68"	"6"	"68"	"4935308.73699951"	"HCD"	"MS2"	"57.4272"	"194.2"	"100.000"	"47.5006"	"13873"	"13873"	"13842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.6"	""	"186.9"	""	"229.4"	""	"379.2"	"2.9"	"440.4"	"411.9"	""	"603"	"29"	"34.000"	"27.000"	"0.0352604066392491"	"23"	"0.0001889"	"0.0005907"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"688.91919"	"1376.83110"	"1376.83021"	"0.65"	"0.00045"	"13/68"	"13"	"68"	"8345325.17980957"	"HCD"	"MS2"	"14.22932"	"635.2"	"100.000"	"47.1723"	"13690"	"13690"	"13672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"674.3"	""	"664.7"	""	"743.4"	""	"1206.8"	""	"1394.3"	"1357.0"	""	"601"	"42"	"34.000"	"27.000"	"0.00185713928241594"	"20"	"0.0001308"	"0.0002894"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"459.61526"	"1376.83124"	"1376.83021"	"0.75"	"0.00034"	"10/68"	"10"	"68"	"200111784.703125"	"HCD"	"MS2"	"3.982103"	"426.8"	"6.281"	"46.4633"	"13401"	"13401"	"13384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"419.6"	""	"367.9"	""	"459.2"	""	"897.8"	""	"931.0"	"991.8"	""	"590"	"32"	"34.000"	"27.000"	"0.0181059791523614"	"25"	"0.0006037"	"0.00442"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"688.91949"	"1376.83171"	"1376.83021"	"1.09"	"0.00075"	"13/68"	"13"	"68"	"292820700.103516"	"HCD"	"MS2"	"0"	"541.8"	"2.526"	"46.7622"	"13571"	"13571"	"13554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"541.4"	""	"470.7"	""	"581.7"	""	"1110.6"	"3.7"	"1212.5"	"1235.9"	""	"584"	"44"	"34.000"	"27.000"	"0.00119504112641163"	"22"	"0.000494"	"0.002714"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"688.91949"	"1376.83171"	"1376.83021"	"1.09"	"0.00075"	"13/68"	"13"	"68"	"313735971.769531"	"HCD"	"MS2"	"0"	"595.9"	"2.586"	"46.5024"	"13417"	"13417"	"13400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"595.2"	""	"505.5"	""	"602.1"	""	"1288.9"	"6.0"	"1327.0"	"1345.9"	""	"584"	"42"	"34.000"	"27.000"	"0.0017313419477736"	"22"	"0.0006037"	"0.003968"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVSGLWGK"	"[K].aTVSGLWGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"688.91956"	"1376.83183"	"1376.83021"	"1.18"	"0.00081"	"13/68"	"13"	"68"	"1138955479.91406"	"HCD"	"MS2"	"0"	"692.7"	"0.819"	"46.4180"	"13430"	"13430"	"13413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"713.2"	""	"627.0"	""	"748.2"	""	"1496.9"	""	"1515.8"	"1486.7"	""	"584"	"44"	"34.000"	"27.000"	"0.00105046805865477"	"22"	"0.00103"	"0.0121"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWIYPIK"	"[K].vWIYPIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88994"	"Mitochondrial amidoxime reducing component 2 OS=Rattus norvegicus OX=10116 GN=Marc2 PE=2 SV=1"	"O88994"	"Mitochondrial amidoxime reducing component 2 OS=Rattus norvegicus OX=10116 GN=Marc2 PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"688.93872"	"1376.87016"	"1376.87062"	"-0.33"	"-0.00023"	"5/50"	"5"	"50"	"1802407.80786133"	"HCD"	"MS2"	"17.33897"	"127.9"	"100.000"	"62.6974"	"20054"	"20054"	"20035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.7"	""	"169.4"	""	"172.8"	""	"216.9"	""	"249.3"	"259.3"	""	"340"	"33"	"32.000"	"25.000"	"0.00921401513682762"	""	"0.0008453"	"0.007914"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWIYPIK"	"[K].vWIYPIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88994"	"Mitochondrial amidoxime reducing component 2 OS=Rattus norvegicus OX=10116 GN=Marc2 PE=2 SV=1"	"O88994"	"Mitochondrial amidoxime reducing component 2 OS=Rattus norvegicus OX=10116 GN=Marc2 PE=2 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"688.93896"	"1376.87065"	"1376.87062"	"0.03"	"0.00002"	"6/50"	"6"	"50"	"1359671.92486572"	"HCD"	"MS2"	"18.94533"	"104.0"	"100.000"	"62.6184"	"19969"	"19969"	"19945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.9"	""	"133.7"	""	"134.1"	""	"174.1"	"1.3"	"206.9"	"215.0"	""	"340"	"43"	"32.000"	"25.000"	"0.000873874207690125"	""	"0.0001889"	"0.0008102"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTTLLEK"	"[R].tLTTLLEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O54924"	"Exocyst complex component 8 OS=Rattus norvegicus OX=10116 GN=Exoc8 PE=1 SV=1"	"O54924"	"Exocyst complex component 8 OS=Rattus norvegicus OX=10116 GN=Exoc8 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"688.94092"	"1376.87456"	"1376.87649"	"-1.40"	"-0.00096"	"14/68"	"14"	"68"	"2517967.50561523"	"HCD"	"MS2"	"0"	"209.3"	"100.000"	"53.0845"	"16098"	"16098"	"16087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.4"	""	"265.9"	""	"275.3"	""	"364.8"	"0.3"	"412.6"	"385.3"	""	"293"	"44"	"31.000"	"24.000"	"0.00063509343683773"	""	"0.0001889"	"0.0006163"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTTLLEK"	"[R].tLTTLLEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O54924"	"Exocyst complex component 8 OS=Rattus norvegicus OX=10116 GN=Exoc8 PE=1 SV=1"	"O54924"	"Exocyst complex component 8 OS=Rattus norvegicus OX=10116 GN=Exoc8 PE=1 SV=1"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"688.94092"	"1376.87456"	"1376.87649"	"-1.40"	"-0.00096"	"14/68"	"14"	"68"	"2953882.05804443"	"HCD"	"MS2"	"0"	"241.8"	"100.000"	"53.2234"	"16206"	"16206"	"16182"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"313.3"	""	"304.8"	""	"311.6"	""	"443.9"	""	"466.5"	"455.6"	""	"293"	"44"	"31.000"	"24.000"	"0.000549335448289634"	""	"0.0001889"	"0.0006158"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSMMFK"	"[K].eFSMMFk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"689.37012"	"1377.73296"	"1377.73109"	"1.36"	"0.00094"	"12/52"	"12"	"52"	"8190365.20098877"	"HCD"	"MS2"	"29.75126"	"710.0"	"100.000"	"57.3596"	"17879"	"17879"	"17861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"989.8"	""	"1038.1"	""	"943.3"	""	"612.9"	""	"1379.8"	"1781.1"	""	"878"	"29"	"36.000"	"29.000"	"0.0560356637068179"	"23"	"0.0006037"	"0.004621"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSMMFK"	"[K].eFSMMFk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"689.37048"	"1377.73369"	"1377.73109"	"1.89"	"0.00130"	"5/52"	"5"	"52"	"8845637.32055664"	"HCD"	"MS2"	"32.89275"	"600.7"	"78.094"	"57.1560"	"17742"	"17742"	"17723"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"849.2"	""	"907.4"	""	"792.4"	""	"538.7"	""	"1132.9"	"1481.2"	""	"914"	"31"	"36.000"	"29.000"	"0.039711491618384"	"24"	"0.0006037"	"0.005431"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWLFETTPR"	"[K].vWLFETTPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVN0"	"Lysophospholipid acyltransferase 5 OS=Rattus norvegicus OX=10116 GN=Lpcat3 PE=2 SV=1"	"Q5FVN0"	"Lysophospholipid acyltransferase 5 OS=Rattus norvegicus OX=10116 GN=Lpcat3 PE=2 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"689.38934"	"1377.77141"	"1377.77280"	"-1.01"	"-0.00070"	"5/68"	"5"	"68"	"2024951.93859863"	"HCD"	"MS2"	"27.29533"	"117.5"	"100.000"	"60.1633"	"19020"	"19020"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.9"	""	"135.4"	""	"149.2"	""	"215.9"	""	"236.4"	"252.0"	""	"899"	"32"	"36.000"	"29.000"	"0.0299040283712683"	"21"	"0.0001308"	"0.0002494"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWLFETTPR"	"[K].vWLFETTPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVN0"	"Lysophospholipid acyltransferase 5 OS=Rattus norvegicus OX=10116 GN=Lpcat3 PE=2 SV=1"	"Q5FVN0"	"Lysophospholipid acyltransferase 5 OS=Rattus norvegicus OX=10116 GN=Lpcat3 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"689.38989"	"1377.77251"	"1377.77280"	"-0.21"	"-0.00015"	"6/68"	"6"	"68"	"1879179.45874023"	"HCD"	"MS2"	"28.64915"	"115.5"	"100.000"	"59.9931"	"18897"	"18897"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.3"	""	"125.7"	""	"151.7"	""	"210.0"	"0.5"	"227.1"	"241.9"	""	"912"	"42"	"36.000"	"29.000"	"0.00267895144753578"	"22"	"0.0001308"	"0.0002777"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLSGMPELR"	"[R].vFLSGMPELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"689.39142"	"1377.77556"	"1377.77617"	"-0.44"	"-0.00031"	"7/80"	"7"	"80"	"3875837.14941406"	"HCD"	"MS2"	"37.25679"	"185.8"	"100.000"	"61.2585"	"19467"	"19467"	"19443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.7"	""	"286.4"	""	"249.8"	""	"259.8"	""	"328.0"	"327.0"	""	"905"	"37"	"36.000"	"29.000"	"0.00862220974878369"	"19"	"0.0001859"	"0.0003521"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLSGMPELR"	"[R].vFLSGMPELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"689.39166"	"1377.77605"	"1377.77617"	"-0.09"	"-0.00006"	"6/80"	"6"	"80"	"3075253.51324463"	"HCD"	"MS2"	"20.61172"	"162.6"	"100.000"	"61.0814"	"19341"	"19341"	"19321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.7"	""	"257.0"	""	"218.8"	""	"228.4"	"0.0"	"305.3"	"270.1"	""	"886"	"28"	"36.000"	"29.000"	"0.0716809456675878"	"19"	"0.0001889"	"0.0009982"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVVEMLIMR"	"[R].sAVVEMLIMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"689.39282"	"1377.77837"	"1377.77954"	"-0.85"	"-0.00059"	"8/80"	"8"	"80"	"4748697.13739014"	"HCD"	"MS2"	"8.116694"	"224.3"	"100.000"	"65.0476"	"21014"	"21014"	"20995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.3"	""	"359.7"	""	"363.8"	""	"268.3"	"1.2"	"397.2"	"430.4"	""	"914"	"52"	"36.000"	"29.000"	"0.000296425936131545"	"22"	"0"	"0.0001041"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVVEMLIMR"	"[R].sAVVEMLIMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.7447"	"0.0000"	"1"	"1"	"1"	"459.93106"	"1377.77863"	"1377.77954"	"-0.66"	"-0.00030"	"7/80"	"7"	"80"	"885527.487121582"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"65.2519"	"21045"	"21045"	"21017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.3"	""	"28.7"	""	"20.9"	""	"26.1"	""	"38.0"	"34.3"	""	"907"	"47"	"36.000"	"29.000"	"0.000890383885545147"	"27"	"0"	"0.0001144"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVVEMLIMR"	"[R].sAVVEMLIMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"689.39307"	"1377.77886"	"1377.77954"	"-0.50"	"-0.00034"	"8/80"	"8"	"80"	"4886496.06304932"	"HCD"	"MS2"	"13.23999"	"235.4"	"100.000"	"65.0743"	"20972"	"20972"	"20953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"307.7"	""	"399.1"	""	"371.2"	""	"278.9"	""	"422.5"	"450.6"	""	"907"	"56"	"36.000"	"29.000"	"0.000112092689976482"	"25"	"0"	"5.742E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVVEMLIMR"	"[R].sAVVEMLIMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"689.40649"	"1377.80571"	"1377.77954"	"18.99"	"0.01308"	"9/80"	"9"	"80"	"6813932.40167236"	"HCD"	"MS2"	"49.22724"	"199.6"	"100.000"	"65.3222"	"21126"	"21126"	"21107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"258.2"	""	"271.0"	""	"385.5"	""	"301.8"	"0.4"	"323.7"	"346.8"	""	"793"	"21"	"35.000"	"28.000"	"0.342170994189604"	"17"	"0.00103"	"0.012"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSLPFQK"	"[K].lSSLPFQk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"689.42847"	"1377.84966"	"1377.85061"	"-0.69"	"-0.00048"	"12/60"	"12"	"60"	"4832954.71899414"	"HCD"	"MS2"	"4.996989"	"356.2"	"100.000"	"51.4120"	"15465"	"15465"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"475.0"	""	"446.8"	""	"506.1"	""	"587.9"	"0.9"	"659.2"	"700.6"	""	"505"	"33"	"34.000"	"27.000"	"0.0116482687576496"	"21"	"0.0001889"	"0.000822"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSLPFQK"	"[K].lSSLPFQk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"689.42859"	"1377.84990"	"1377.85061"	"-0.51"	"-0.00035"	"7/60"	"7"	"60"	"3617534.72052002"	"HCD"	"MS2"	"5.13292"	"281.7"	"100.000"	"51.2539"	"15350"	"15350"	"15330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.6"	""	"365.3"	""	"405.1"	""	"446.6"	""	"537.4"	"555.4"	""	"504"	"41"	"34.000"	"27.000"	"0.00179638963591883"	"21"	"0.0001889"	"0.0004737"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSLPFQK"	"[K].lSSLPFQk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"689.42865"	"1377.85002"	"1377.85061"	"-0.42"	"-0.00029"	"7/60"	"7"	"60"	"6382967.48382568"	"HCD"	"MS2"	"1.725525"	"463.5"	"100.000"	"50.9312"	"15219"	"15219"	"15202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"637.7"	""	"613.9"	""	"662.7"	""	"773.0"	"0.8"	"815.5"	"887.4"	""	"504"	"42"	"34.000"	"27.000"	"0.00156819671862628"	"21"	"0.0001889"	"0.0007374"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSLPFQK"	"[K].lSSLPFQk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"689.42914"	"1377.85100"	"1377.85061"	"0.28"	"0.00020"	"12/60"	"12"	"60"	"6205954.08410645"	"HCD"	"MS2"	"0"	"428.2"	"100.000"	"51.0992"	"15337"	"15337"	"15318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"561.1"	"2.5"	"559.6"	""	"600.5"	""	"742.8"	""	"750.0"	"847.0"	""	"522"	"32"	"34.000"	"27.000"	"0.016242037442915"	"21"	"0.0001889"	"0.0007727"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLTAAITK"	"[K].tTLTAAITk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"689.43842"	"1377.86955"	"1377.87174"	"-1.58"	"-0.00109"	"8/78"	"8"	"78"	"5521130.41723633"	"HCD"	"MS2"	"10.8306"	"388.3"	"100.000"	"39.9370"	"10749"	"10749"	"10725"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"561.6"	""	"548.3"	""	"601.6"	""	"640.9"	""	"677.8"	"648.4"	""	"254"	"61"	"31.000"	"24.000"	"1.06366218830114E-05"	""	"0"	"0.0001487"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLTAAITK"	"[K].tTLTAAITk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"689.43878"	"1377.87029"	"1377.87174"	"-1.05"	"-0.00073"	"8/78"	"8"	"78"	"4788960.30535889"	"HCD"	"MS2"	"0"	"355.9"	"100.000"	"40.0484"	"10839"	"10839"	"10813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"510.2"	""	"515.1"	""	"528.5"	""	"633.3"	""	"600.0"	"580.3"	""	"254"	"61"	"31.000"	"24.000"	"1.08094530851702E-05"	""	"0.0001308"	"0.0002444"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVPIIPPR"	"[R].kVPIIPPR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"459.98288"	"1377.93409"	"1377.93461"	"-0.38"	"-0.00018"	"6/72"	"6"	"72"	"15600591.8023071"	"HCD"	"MS2"	"15.255"	"652.6"	"100.000"	"34.4164"	"8529"	"8529"	"8508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"402.9"	""	"403.0"	""	"452.9"	""	"1542.2"	"4.3"	"1754.1"	"1677.0"	""	"21"	"16"	"20.000"	"13.000"	"0.0260129316051495"	""	"0.002953"	"0.05353"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVPIIPPR"	"[R].kVPIIPPR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"459.98294"	"1377.93427"	"1377.93461"	"-0.25"	"-0.00011"	"6/72"	"6"	"72"	"17634974.1186523"	"HCD"	"MS2"	"10.04913"	"492.0"	"63.295"	"34.3846"	"8473"	"8473"	"8451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.7"	""	"311.0"	""	"349.3"	""	"1156.4"	""	"1298.6"	"1289.2"	""	"21"	"17"	"20.000"	"13.000"	"0.0189753283231147"	""	"0.003107"	"0.05917"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDQAFGVPR"	"[R].lFDQAFGVPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8676"	"0.0000"	"1"	"1"	"1"	"460.26041"	"1378.76667"	"1378.76805"	"-1.00"	"-0.00046"	"12/84"	"12"	"84"	"5879221.65264893"	"HCD"	"MS2"	"4.950457"	"76.1"	"100.000"	"57.7965"	"18004"	"18004"	"17979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.7"	""	"99.4"	""	"99.9"	""	"131.9"	"0.3"	"155.3"	"154.1"	""	"938"	"68"	"36.000"	"29.000"	"6.81040348648652E-06"	"26"	"0"	"6.659E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDQAFGVPR"	"[R].lFDQAFGVPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"689.88763"	"1378.76799"	"1378.76805"	"-0.04"	"-0.00003"	"9/84"	"9"	"84"	"10334059.8009644"	"HCD"	"MS2"	"20.91474"	"494.4"	"100.000"	"57.8481"	"18079"	"18079"	"18053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"577.2"	""	"666.6"	""	"680.3"	""	"854.0"	"4.6"	"963.8"	"942.9"	""	"937"	"58"	"36.000"	"29.000"	"7.00986404880242E-05"	"28"	"0"	"0.0001127"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDQAFGVPR"	"[R].lFDQAFGVPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.9074"	"0.0000"	"1"	"1"	"1"	"460.26096"	"1378.76831"	"1378.76805"	"0.19"	"0.00009"	"12/84"	"12"	"84"	"6872540.15045166"	"HCD"	"MS2"	"7.5351"	"88.8"	"100.000"	"57.9933"	"18138"	"18138"	"18117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.7"	""	"123.8"	""	"119.4"	""	"164.6"	""	"165.9"	"171.5"	""	"937"	"54"	"36.000"	"29.000"	"0.000192623644337469"	"21"	"0"	"0.0001338"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDQAFGVPR"	"[R].lFDQAFGVPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"689.88794"	"1378.76860"	"1378.76805"	"0.40"	"0.00028"	"9/84"	"9"	"84"	"10764650.022644"	"HCD"	"MS2"	"12.69814"	"524.4"	"100.000"	"57.6680"	"17951"	"17951"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"620.1"	""	"719.4"	""	"712.8"	""	"922.0"	"5.3"	"1000.2"	"992.9"	""	"937"	"58"	"36.000"	"29.000"	"7.07472552225904E-05"	"28"	"0"	"8.669E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDQAFGVPR"	"[R].lFDQAFGVPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"689.89087"	"1378.77446"	"1378.76805"	"4.65"	"0.00321"	"9/84"	"9"	"84"	"97255321.8286133"	"HCD"	"MS2"	"38.94479"	"667.4"	"10.383"	"57.9718"	"18076"	"18076"	"18059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"951.4"	""	"920.8"	""	"967.4"	""	"1097.2"	"8.0"	"1174.6"	"1199.9"	""	"881"	"31"	"36.000"	"29.000"	"0.0320587003898471"	"27"	"0.0003839"	"0.001612"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYTGTGFK"	"[K].fYTGTGFk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"689.89172"	"1378.77617"	"1378.77711"	"-0.68"	"-0.00047"	"7/60"	"7"	"60"	"3898597.81988525"	"HCD"	"MS2"	"0"	"344.8"	"100.000"	"44.6145"	"12698"	"12698"	"12685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"438.8"	""	"422.3"	""	"473.1"	""	"601.0"	"1.7"	"671.8"	"661.1"	""	"871"	"14"	"36.000"	"29.000"	"1.59583563759131"	"15"	"0.0003146"	"0.001479"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYTGTGFK"	"[K].fYTGTGFk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.89209"	"1378.77690"	"1378.77711"	"-0.15"	"-0.00010"	"7/60"	"7"	"60"	"3784718.22796631"	"HCD"	"MS2"	"45.72626"	"357.7"	"100.000"	"44.3394"	"12537"	"12537"	"12518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.2"	""	"434.9"	""	"485.1"	""	"636.6"	""	"702.1"	"700.8"	""	"887"	"11"	"36.000"	"29.000"	"3.74881167828588"	"14"	"0.0002277"	"0.001152"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDQAFGVPR"	"[R].lFDQAFGVPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"689.89294"	"1378.77861"	"1378.76805"	"7.66"	"0.00528"	"9/84"	"9"	"84"	"96370782.7148438"	"HCD"	"MS2"	"22.53341"	"861.8"	"14.725"	"58.1382"	"18198"	"18198"	"18181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1168.9"	""	"1157.0"	""	"1274.5"	""	"1458.5"	"0.6"	"1536.3"	"1565.9"	""	"894"	"37"	"36.000"	"29.000"	"0.00871580536091846"	"25"	"0.0004166"	"0.00231"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFPWQAK"	"[K].gSFPWQAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"689.89746"	"1378.78765"	"1378.78834"	"-0.51"	"-0.00035"	"12/60"	"12"	"60"	"3001628.03686523"	"HCD"	"MS2"	"3.710638"	"241.7"	"100.000"	"44.9612"	"12790"	"12790"	"12768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.2"	""	"280.9"	""	"266.8"	""	"468.6"	"11.1"	"461.9"	"431.0"	""	"887"	"20"	"36.000"	"29.000"	"0.495328850390678"	"16"	"0.0001889"	"0.0008644"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFPWQAK"	"[K].gSFPWQAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"460.26743"	"1378.78772"	"1378.78834"	"-0.45"	"-0.00021"	"8/60"	"8"	"60"	"5145184.14178467"	"HCD"	"MS2"	"49.13599"	"234.9"	"100.000"	"44.6624"	"12668"	"12668"	"12646"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"356.7"	""	"269.1"	""	"257.7"	""	"424.9"	"1.8"	"469.2"	"448.5"	""	"882"	"17"	"36.000"	"29.000"	"0.971490570206574"	"19"	"0.0008731"	"0.008895"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFPWQAK"	"[K].gSFPWQAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.89752"	"1378.78777"	"1378.78834"	"-0.42"	"-0.00029"	"6/60"	"6"	"60"	"2876817.40124512"	"HCD"	"MS2"	"0"	"235.6"	"100.000"	"45.2299"	"12949"	"12949"	"12923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.6"	""	"284.2"	""	"254.0"	""	"473.8"	"17.3"	"455.4"	"404.9"	""	"880"	"7"	"36.000"	"29.000"	"8.15553914302517"	"13"	"0.0001889"	"0.001018"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFPWQAK"	"[K].gSFPWQAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"689.89752"	"1378.78777"	"1378.78834"	"-0.42"	"-0.00029"	"12/60"	"12"	"60"	"12309423.2844238"	"HCD"	"MS2"	"1.718018"	"890.5"	"97.935"	"44.8987"	"12813"	"12813"	"12799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1581.6"	""	"1001.7"	""	"878.6"	""	"2013.1"	"2.6"	"1544.2"	"1403.9"	""	"880"	"34"	"36.000"	"29.000"	"0.0185974190276865"	"23"	"0.0003571"	"0.001482"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFPWQAK"	"[K].gSFPWQAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"689.89764"	"1378.78801"	"1378.78834"	"-0.24"	"-0.00017"	"12/60"	"12"	"60"	"11899237.0969849"	"HCD"	"MS2"	"1.415146"	"713.5"	"81.552"	"44.6487"	"12662"	"12662"	"12646"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1220.7"	""	"841.1"	""	"690.0"	""	"1618.1"	"2.8"	"1262.6"	"1117.4"	""	"880"	"34"	"36.000"	"29.000"	"0.0185546461508576"	"23"	"0.0002277"	"0.001118"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGALDAAAK"	"[R].fGGALDAAAk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"689.90710"	"1378.80693"	"1378.80947"	"-1.84"	"-0.00127"	"9/72"	"9"	"72"	"6723991.5791626"	"HCD"	"MS2"	"0"	"594.0"	"100.000"	"41.2631"	"11292"	"11292"	"11269"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"915.5"	""	"764.0"	""	"850.5"	""	"963.7"	"0.9"	"939.9"	"1187.6"	""	"788"	"52"	"35.000"	"28.000"	"0.000269461189028883"	""	"0"	"7.741E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGALDAAAK"	"[R].fGGALDAAAk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"689.90729"	"1378.80730"	"1378.80947"	"-1.58"	"-0.00109"	"8/72"	"8"	"72"	"1080539.49749756"	"HCD"	"MS2"	"0"	"112.0"	"100.000"	"41.6069"	"11433"	"11433"	"11403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.9"	""	"146.0"	""	"157.0"	""	"176.2"	"1.6"	"209.0"	"209.6"	""	"795"	"35"	"35.000"	"29.000"	"0.0125411433779141"	"26"	"0"	"0.0001158"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGALDAAAK"	"[R].fGGALDAAAk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"689.90796"	"1378.80864"	"1378.80947"	"-0.60"	"-0.00042"	"9/72"	"9"	"72"	"6756226.94116211"	"HCD"	"MS2"	"11.17286"	"581.6"	"100.000"	"41.4580"	"11416"	"11416"	"11389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"890.5"	""	"752.9"	""	"843.2"	""	"953.6"	"1.7"	"957.3"	"1105.7"	""	"781"	"50"	"35.000"	"28.000"	"0.000411738083040787"	""	"0"	"7.12E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDDK"	"[R].gLFIIDDk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1;Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1; Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"689.91858"	"1378.82988"	"1378.83462"	"-3.44"	"-0.00237"	"11/58"	"11"	"58"	"108987432.163574"	"HCD"	"MS2"	"47.40071"	"707.4"	"10.115"	"58.1774"	"18214"	"18214"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1012.8"	""	"968.1"	""	"1051.6"	""	"1152.5"	"3.4"	"1225.3"	"1283.0"	""	"614"	"31"	"34.000"	"27.000"	"0.0243297908457505"	""	"0.0008453"	"0.008246"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDDK"	"[R].gLFIIDDk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1;Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1; Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"689.91876"	"1378.83025"	"1378.83462"	"-3.17"	"-0.00219"	"7/58"	"7"	"58"	"99636540.6328125"	"HCD"	"MS2"	"40.25685"	"725.0"	"10.275"	"58.0107"	"18092"	"18092"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1048.0"	""	"1002.0"	""	"1057.4"	""	"1203.3"	""	"1257.3"	"1298.7"	""	"613"	"44"	"34.000"	"27.000"	"0.00111539958572989"	""	"0.0006037"	"0.004589"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VITDPFTK"	"[K].vITDPFTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"689.91907"	"1378.83086"	"1378.83462"	"-2.73"	"-0.00188"	"6/64"	"6"	"64"	"3795578.50354004"	"HCD"	"MS2"	"5.877692"	"268.1"	"100.000"	"50.8396"	"15231"	"15231"	"15206"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"354.7"	""	"361.5"	""	"385.4"	""	"437.8"	""	"476.1"	"533.6"	""	"610"	"29"	"34.000"	"27.000"	"0.0343795224133531"	"18"	"0.0001889"	"0.0009726"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VITDPFTK"	"[K].vITDPFTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"689.91962"	"1378.83196"	"1378.83462"	"-1.93"	"-0.00133"	"5/64"	"5"	"64"	"4463232.94604492"	"HCD"	"MS2"	"0"	"316.7"	"100.000"	"50.6281"	"15094"	"15094"	"15074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.4"	""	"410.8"	""	"445.4"	""	"536.6"	""	"549.5"	"628.3"	""	"610"	"37"	"34.000"	"27.000"	"0.00565327145141517"	"20"	"0.0001889"	"0.0007273"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDDK"	"[R].gLFIIDDk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1;Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1; Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.6333"	"0.0000"	"1"	"1"	"1"	"460.28250"	"1378.83295"	"1378.83462"	"-1.21"	"-0.00056"	"9/58"	"9"	"58"	"7550833.51312256"	"HCD"	"MS2"	"49.10004"	"239.6"	"100.000"	"58.2003"	"18223"	"18223"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"354.6"	""	"342.5"	""	"361.5"	""	"378.1"	""	"408.0"	"426.3"	""	"587"	"30"	"34.000"	"27.000"	"0.0316670862974455"	"26"	"0.0006037"	"0.005133"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDDK"	"[R].gLFIIDDk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1;Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1; Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"689.92029"	"1378.83330"	"1378.83462"	"-0.96"	"-0.00066"	"7/58"	"7"	"58"	"6285579.36791992"	"HCD"	"MS2"	"12.49382"	"472.2"	"100.000"	"58.3279"	"18221"	"18221"	"18203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"658.5"	""	"605.3"	""	"709.4"	""	"793.3"	""	"845.3"	"871.1"	""	"573"	"42"	"34.000"	"27.000"	"0.00169482408191273"	""	"0.0001889"	"0.0009994"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDDK"	"[R].gLFIIDDk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1;Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1; Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"689.92065"	"1378.83403"	"1378.83462"	"-0.43"	"-0.00030"	"7/58"	"7"	"58"	"6802325.078125"	"HCD"	"MS2"	"14.44355"	"524.8"	"100.000"	"58.4968"	"18344"	"18344"	"18325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"739.8"	""	"715.7"	""	"818.6"	""	"836.2"	"1.7"	"908.9"	"947.3"	""	"578"	"42"	"34.000"	"27.000"	"0.00172146359479884"	""	"0.0001889"	"0.0005973"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDDK"	"[R].gLFIIDDk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1;Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1; Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"460.28290"	"1378.83414"	"1378.83462"	"-0.35"	"-0.00016"	"9/58"	"9"	"58"	"7406732.1630249"	"HCD"	"MS2"	"45.74229"	"263.1"	"100.000"	"58.0338"	"18101"	"18101"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.7"	""	"387.6"	""	"379.0"	""	"431.8"	""	"429.7"	"485.7"	""	"578"	"30"	"34.000"	"27.000"	"0.0298468046265044"	""	"0.0006037"	"0.004239"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFTLLEK"	"[R].vAFTLLEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.94043"	"1378.87358"	"1378.87101"	"1.87"	"0.00129"	"7/62"	"7"	"62"	"4858071.71856689"	"HCD"	"MS2"	"32.4499"	"332.1"	"100.000"	"61.7385"	"19610"	"19610"	"19593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"523.3"	""	"510.0"	""	"500.2"	""	"504.9"	"3.1"	"520.6"	"577.5"	""	"240"	"43"	"30.000"	"23.000"	"0.00054850582753785"	"15"	"0.0001889"	"0.001035"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFTLLEK"	"[R].vAFTLLEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"689.94092"	"1378.87456"	"1378.87101"	"2.57"	"0.00178"	"7/62"	"7"	"62"	"5040593.23028564"	"HCD"	"MS2"	"43.03724"	"362.7"	"100.000"	"61.8742"	"19718"	"19718"	"19699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"611.7"	""	"563.2"	""	"560.3"	""	"553.4"	"0.2"	"561.6"	"575.4"	""	"240"	"43"	"30.000"	"23.000"	"0.000562576058574318"	"16"	"0.0001889"	"0.00092"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPNVFGK"	"[K].eMPNVFGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"460.59659"	"1379.77521"	"1379.77573"	"-0.37"	"-0.00017"	"7/64"	"7"	"64"	"12224389.9605713"	"HCD"	"MS2"	"44.33536"	"474.4"	"100.000"	"47.9605"	"14061"	"14061"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"725.4"	""	"635.0"	""	"707.8"	""	"566.5"	""	"950.3"	"916.8"	""	"904"	"15"	"36.000"	"29.000"	"1.58175215496817"	"20"	"0.0003839"	"0.001622"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPNVFGK"	"[K].eMPNVFGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"690.39172"	"1379.77617"	"1379.77573"	"0.32"	"0.00022"	"7/64"	"7"	"64"	"27956158.6166992"	"HCD"	"MS2"	"24.72182"	"825.8"	"39.101"	"47.9744"	"14067"	"14067"	"14050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1308.8"	""	"1090.3"	""	"1239.0"	""	"930.2"	"1.6"	"1642.3"	"1615.3"	""	"868"	"30"	"36.000"	"29.000"	"0.0443087735929133"	"25"	"0.0004166"	"0.002261"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPNVFGK"	"[K].eMPNVFGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"460.59702"	"1379.77649"	"1379.77573"	"0.55"	"0.00025"	"8/64"	"8"	"64"	"11825471.8032837"	"HCD"	"MS2"	"35.46246"	"469.6"	"100.000"	"47.6991"	"13906"	"13906"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"748.5"	""	"631.3"	""	"696.3"	""	"561.0"	""	"921.3"	"892.9"	""	"865"	"18"	"36.000"	"29.000"	"0.722746690689382"	"24"	"0.0004166"	"0.002263"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPNVFGK"	"[K].eMPNVFGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"690.39264"	"1379.77800"	"1379.77573"	"1.65"	"0.00114"	"6/64"	"6"	"64"	"26835486.8591309"	"HCD"	"MS2"	"42.93024"	"837.1"	"38.538"	"47.6806"	"13898"	"13898"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1256.8"	""	"1103.0"	""	"1245.2"	""	"1000.4"	""	"1733.3"	"1604.2"	""	"886"	"28"	"36.000"	"29.000"	"0.0644768372697811"	"24"	"0.000523"	"0.002876"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAPLGWSK"	"[R].yAPLGWSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"690.40790"	"1379.80852"	"1379.80874"	"-0.16"	"-0.00011"	"6/56"	"6"	"56"	"16495748.4760742"	"HCD"	"MS2"	"10.7755"	"1145.0"	"87.207"	"47.6077"	"13868"	"13868"	"13848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1583.6"	""	"1507.6"	""	"1646.5"	""	"1617.3"	""	"2317.9"	"2187.0"	""	"723"	"28"	"35.000"	"28.000"	"0.0622455489857442"	"17"	"0.0003839"	"0.001893"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAPLGWSK"	"[R].yAPLGWSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"690.40851"	"1379.80974"	"1379.80874"	"0.72"	"0.00050"	"6/56"	"6"	"56"	"15920210.7879028"	"HCD"	"MS2"	"6.181877"	"982.7"	"84.699"	"47.8668"	"14022"	"14022"	"14002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1338.4"	""	"1290.9"	""	"1399.1"	""	"1481.6"	""	"1954.5"	"1861.7"	""	"727"	"25"	"35.000"	"28.000"	"0.114948792947121"	"18"	"0.000523"	"0.002992"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVNLDVK"	"[R].fSVNLDVk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"690.41797"	"1379.82866"	"1379.82987"	"-0.88"	"-0.00061"	"7/72"	"7"	"72"	"4097549.43676758"	"HCD"	"MS2"	"14.58477"	"311.5"	"100.000"	"52.3907"	"15865"	"15865"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"462.5"	""	"450.0"	""	"459.6"	""	"436.8"	""	"495.0"	"645.0"	""	"561"	"26"	"34.000"	"27.000"	"0.0770784309945223"	"17"	"0.0003839"	"0.001789"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVNLDVK"	"[R].fSVNLDVk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"690.41827"	"1379.82927"	"1379.82987"	"-0.44"	"-0.00030"	"7/72"	"7"	"72"	"7007622.17980957"	"HCD"	"MS2"	"1.549819"	"583.9"	"100.000"	"52.0778"	"15687"	"15687"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"932.5"	""	"913.7"	""	"917.9"	""	"698.5"	""	"834.8"	"1229.6"	""	"557"	"41"	"34.000"	"27.000"	"0.00235410158377141"	""	"0.0001889"	"0.000747"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIAAHGNSLR"	"[R].vLIAAHGNSLR.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"690.41907"	"1379.83086"	"1379.83205"	"-0.86"	"-0.00060"	"9/86"	"9"	"86"	"661374.144775391"	"HCD"	"MS2"	"15.63533"	"39.6"	"100.000"	"31.2848"	"7215"	"7215"	"7190"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.6"	""	"61.2"	""	"59.6"	""	"61.2"	""	"56.0"	"76.1"	""	"559"	"41"	"34.000"	"27.000"	"0.00231409834757598"	"27"	"0.0001859"	"0.0003223"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIAAHGNSLR"	"[R].vLIAAHGNSLR.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"690.41907"	"1379.83086"	"1379.83205"	"-0.86"	"-0.00060"	"10/86"	"10"	"86"	"737343.75378418"	"HCD"	"MS2"	"0"	"42.1"	"100.000"	"31.3760"	"7295"	"7295"	"7264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.3"	""	"58.6"	""	"70.8"	""	"55.9"	""	"72.4"	"79.1"	""	"559"	"48"	"34.000"	"27.000"	"0.000438916403811228"	"27"	"0"	"6.081E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPATSYVR"	"[R].kPATSYVR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.42340"	"1379.83953"	"1379.84111"	"-1.15"	"-0.00079"	"6/72"	"6"	"72"	"1398543.52374268"	"HCD"	"MS2"	"0"	"67.8"	"100.000"	"26.2083"	"5188"	"5188"	"5166"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.3"	""	"101.2"	""	"105.3"	""	"98.8"	"1.3"	"128.7"	"99.1"	""	"519"	"13"	"34.000"	"27.000"	"1.34010047826102"	"13"	"0.0006037"	"0.004708"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPATSYVR"	"[R].kPATSYVR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"460.61816"	"1379.83994"	"1379.84111"	"-0.85"	"-0.00039"	"5/72"	"5"	"72"	"19072048.4932861"	"HCD"	"MS2"	"18.64456"	"517.5"	"52.503"	"26.2496"	"5204"	"5204"	"5192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"738.9"	""	"752.2"	""	"855.7"	""	"837.0"	""	"945.2"	"770.1"	""	"510"	"9"	"34.000"	"27.000"	"3.28503635681749"	"13"	"0.0004166"	"0.002271"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPATSYVR"	"[R].kPATSYVR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"460.61832"	"1379.84040"	"1379.84111"	"-0.51"	"-0.00024"	"10/72"	"10"	"72"	"25893641.7741699"	"HCD"	"MS2"	"17.84041"	"608.4"	"48.088"	"26.3218"	"5271"	"5271"	"5256"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"870.7"	""	"918.6"	""	"984.7"	""	"997.7"	""	"1089.2"	"895.4"	""	"511"	"8"	"34.000"	"27.000"	"4.13419449617803"	"13"	"0.0003839"	"0.00195"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPATSYVR"	"[R].kPATSYVR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"690.42462"	"1379.84197"	"1379.84111"	"0.62"	"0.00043"	"6/72"	"6"	"72"	"1478348.31896973"	"HCD"	"MS2"	"0"	"69.5"	"100.000"	"26.2804"	"5254"	"5254"	"5233"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.8"	""	"99.2"	""	"116.4"	""	"121.1"	"1.1"	"114.3"	"100.8"	""	"508"	"18"	"34.000"	"27.000"	"0.378297713738573"	"17"	"0.003604"	"0.08301"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVMMGPYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.86658"	"1380.72588"	"1380.73293"	"-5.11"	"-0.00353"	"6/88"	"6"	"88"	"9077082.09655762"	"HCD"	"MS2"	"19.66051"	"438.6"	"80.858"	"48.3299"	"14212"	"14212"	"14197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"670.2"	""	"673.8"	""	"627.6"	""	"523.0"	"2.9"	"805.2"	"852.6"	""	"788"	"43"	"35.000"	"28.000"	"0.00217018232383729"	"15"	"0.0003839"	"0.002001"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVMMGPYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.86688"	"1380.72649"	"1380.73293"	"-4.66"	"-0.00322"	"6/88"	"6"	"88"	"8691672.77154541"	"HCD"	"MS2"	"13.30206"	"509.1"	"100.000"	"48.0571"	"14052"	"14052"	"14037"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"784.6"	""	"750.3"	""	"706.3"	""	"629.0"	"7.5"	"941.1"	"1004.6"	""	"809"	"43"	"36.000"	"29.000"	"0.00216729747964146"	"15"	"0.000523"	"0.003154"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVMMGPYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.86804"	"1380.72881"	"1380.73293"	"-2.98"	"-0.00206"	"6/88"	"6"	"88"	"10523767.0686646"	"HCD"	"MS2"	"2.316304"	"527.7"	"100.000"	"48.3646"	"14178"	"14178"	"14160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"903.8"	""	"824.4"	""	"790.7"	""	"538.5"	"9.3"	"907.7"	"1019.9"	""	"805"	"43"	"36.000"	"29.000"	"0.00183132694210395"	"16"	"0.0001308"	"0.0002382"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVMMGPYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.86823"	"1380.72917"	"1380.73293"	"-2.72"	"-0.00188"	"8/88"	"8"	"88"	"11498929.3299561"	"HCD"	"MS2"	"3.572268"	"426.1"	"70.823"	"48.6328"	"14336"	"14336"	"14319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"733.0"	""	"688.6"	""	"642.5"	""	"435.8"	"12.7"	"716.8"	"801.6"	""	"804"	"47"	"36.000"	"29.000"	"0.00087948017282772"	"15"	"0.0001889"	"0.0004305"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLVTMK"	"[K].sLDLVTmk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"690.91168"	"1380.81609"	"1380.81726"	"-0.85"	"-0.00059"	"7/66"	"7"	"66"	"3045412.58514404"	"HCD"	"MS2"	"0"	"212.0"	"100.000"	"41.9552"	"11574"	"11574"	"11557"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.3"	""	"241.5"	""	"301.2"	""	"425.9"	"1.8"	"372.8"	"388.4"	""	"661"	"34"	"35.000"	"28.000"	"0.0121947096327435"	"21"	"0.0001889"	"0.0009798"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLVTMK"	"[K].sLDLVTmk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"690.91223"	"1380.81719"	"1380.81726"	"-0.05"	"-0.00004"	"7/66"	"7"	"66"	"2968827.64813232"	"HCD"	"MS2"	"0"	"216.1"	"100.000"	"42.1755"	"11708"	"11708"	"11696"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.9"	""	"265.1"	""	"297.7"	""	"440.6"	""	"378.3"	"389.7"	""	"633"	"34"	"35.000"	"28.000"	"0.0115179108934261"	"21"	"0.000523"	"0.002951"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVINSAGYK"	"[R].aVINSAGYk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"690.91534"	"1380.82341"	"1380.82512"	"-1.24"	"-0.00085"	"14/74"	"14"	"74"	"8234024.2645874"	"HCD"	"MS2"	"8.214914"	"611.0"	"100.000"	"34.5403"	"8537"	"8537"	"8515"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"894.1"	""	"949.2"	""	"895.6"	""	"940.9"	""	"1058.3"	"1044.8"	""	"570"	"49"	"34.000"	"27.000"	"0.000322734103522134"	"23"	"0.0001308"	"0.0002838"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVINSAGYK"	"[R].aVINSAGYk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"690.91559"	"1380.82390"	"1380.82512"	"-0.88"	"-0.00061"	"14/74"	"14"	"74"	"8104486.35339355"	"HCD"	"MS2"	"4.127062"	"580.5"	"100.000"	"34.6091"	"8608"	"8608"	"8586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"837.3"	""	"891.5"	""	"900.3"	""	"872.2"	""	"984.6"	"1006.9"	""	"564"	"50"	"34.000"	"27.000"	"0.000314955435874118"	"23"	"0.0001308"	"0.0002372"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKFPAFEL"	"[K].akFPAFEL.[-]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.91821"	"1380.82915"	"1380.82914"	"0.00"	"0.00000"	"11/56"	"11"	"56"	"3593034.00482178"	"HCD"	"MS2"	"12.55575"	"223.4"	"100.000"	"62.4155"	"19886"	"19886"	"19865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.6"	""	"318.0"	""	"395.9"	""	"311.7"	""	"340.9"	"356.0"	""	"550"	"15"	"34.000"	"27.000"	"0.90851623785124"	"13"	"0.003571"	"0.08285"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALLMAEMSR"	"[R].mALLMAEMSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"461.24442"	"1381.71869"	"1381.72031"	"-1.17"	"-0.00054"	"13/76"	"13"	"76"	"4084402.88031006"	"HCD"	"MS2"	"37.03021"	"43.0"	"100.000"	"64.1651"	"20654"	"20654"	"20627"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.2"	""	"69.5"	""	"64.1"	""	"67.4"	"1.2"	"72.6"	"70.2"	""	"704"	"45"	"35.000"	"28.000"	"0.00112342132499547"	"23"	"0.0001308"	"0.0002958"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALLMAEMSR"	"[R].mALLMAEMSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"691.36334"	"1381.71941"	"1381.72031"	"-0.66"	"-0.00045"	"7/76"	"7"	"76"	"8233139.72076416"	"HCD"	"MS2"	"17.1372"	"400.4"	"100.000"	"64.0730"	"20616"	"20616"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"582.5"	""	"604.0"	""	"601.6"	""	"583.9"	"14.9"	"671.9"	"731.0"	""	"703"	"52"	"35.000"	"28.000"	"0.000222292765758741"	"24"	"0"	"7.899E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALLMAEMSR"	"[R].mALLMAEMSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"691.36359"	"1381.71990"	"1381.72031"	"-0.30"	"-0.00021"	"7/76"	"7"	"76"	"9741722.5526123"	"HCD"	"MS2"	"5.312138"	"483.4"	"100.000"	"64.0492"	"20554"	"20554"	"20537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"703.5"	""	"754.9"	""	"732.0"	""	"695.7"	"3.0"	"800.4"	"884.9"	""	"713"	"52"	"35.000"	"28.000"	"0.000218302914649882"	"24"	"0"	"0.0001308"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALLMAEMSR"	"[R].mALLMAEMSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7755"	"0.0000"	"1"	"1"	"1"	"461.24506"	"1381.72062"	"1381.72031"	"0.22"	"0.00010"	"13/76"	"13"	"76"	"3995950.94073486"	"HCD"	"MS2"	"21.44038"	"39.1"	"100.000"	"64.1552"	"20597"	"20597"	"20569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.1"	""	"55.5"	""	"64.1"	""	"55.1"	"0.6"	"70.6"	"73.9"	""	"713"	"49"	"35.000"	"28.000"	"0.000432573125190765"	"26"	"0.0001308"	"0.0003103"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLIQSMK"	"[R].fGLIQSMk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"691.41797"	"1381.82866"	"1381.82776"	"0.65"	"0.00045"	"12/62"	"12"	"62"	"3949306.70880127"	"HCD"	"MS2"	"7.812665"	"346.0"	"100.000"	"55.2186"	"17004"	"17004"	"16981"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"580.5"	""	"518.4"	""	"545.6"	""	"379.1"	"0.4"	"601.2"	"648.5"	""	"450"	"35"	"33.000"	"26.000"	"0.00776573413505676"	"20"	"0.0001889"	"0.0009198"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLIQSMK"	"[R].fGLIQSMk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"691.41919"	"1381.83110"	"1381.82776"	"2.42"	"0.00167"	"12/62"	"12"	"62"	"4123817.24725342"	"HCD"	"MS2"	"19.92542"	"376.0"	"100.000"	"55.0474"	"16880"	"16880"	"16859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"594.1"	""	"593.8"	""	"614.2"	""	"402.7"	"2.6"	"638.8"	"711.7"	""	"474"	"36"	"33.000"	"26.000"	"0.00575106592534532"	"21"	"0.0001889"	"0.001081"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPVTVHSR"	"[R].kPVTVHSR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"461.29358"	"1381.86618"	"1381.86799"	"-1.31"	"-0.00060"	"7/76"	"7"	"76"	"8449642.73455811"	"HCD"	"MS2"	"19.92147"	"401.2"	"100.000"	"21.5106"	"3351"	"3351"	"3336"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"626.8"	""	"588.2"	""	"595.5"	""	"671.6"	""	"663.6"	"648.4"	""	"238"	"10"	"30.000"	"23.000"	"1.17097321585575"	"13"	"0.0001889"	"0.0003853"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPVTVHSR"	"[R].kPVTVHSR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"461.29361"	"1381.86628"	"1381.86799"	"-1.24"	"-0.00057"	"7/76"	"7"	"76"	"8656654.99456787"	"HCD"	"MS2"	"22.90374"	"399.0"	"100.000"	"21.4901"	"3310"	"3310"	"3294"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"649.0"	""	"579.3"	""	"606.8"	""	"644.3"	""	"653.7"	"642.1"	""	"234"	"11"	"30.000"	"23.000"	"0.839819320787493"	"13"	"0.0001889"	"0.0004868"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPVTVHSR"	"[R].kPVTVHSR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.43744"	"1381.86760"	"1381.86799"	"-0.28"	"-0.00019"	"4/76"	"4"	"76"	"218251.806396484"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"21.5085"	"3318"	"3318"	"3294"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.0"	""	"16.1"	""	"20.9"	""	"18.4"	""	"19.8"	"18.6"	""	"231"	"11"	"30.000"	"23.000"	"0.860165429861418"	"13"	"0.007595"	"0.2977"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTPVAIAAGR"	"[K].aLLTPVAIAAGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"461.29550"	"1381.87195"	"1381.87285"	"-0.65"	"-0.00030"	"7/88"	"7"	"88"	"4454182.54742432"	"HCD"	"MS2"	"20.62474"	"95.6"	"100.000"	"52.7107"	"15996"	"15996"	"15974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.8"	""	"119.3"	""	"133.0"	""	"158.2"	""	"164.9"	"209.6"	""	"239"	"45"	"30.000"	"23.000"	"0.000396613876775369"	"15"	"0.0001889"	"0.0007533"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTPVAIAAGR"	"[K].aLLTPVAIAAGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"461.29559"	"1381.87223"	"1381.87285"	"-0.45"	"-0.00021"	"12/88"	"12"	"88"	"3932383.15753174"	"HCD"	"MS2"	"29.13405"	"83.7"	"100.000"	"52.5608"	"15885"	"15885"	"15858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.4"	""	"97.3"	""	"116.7"	""	"143.2"	""	"149.9"	"180.2"	""	"239"	"37"	"30.000"	"23.000"	"0.00234621553081907"	"17"	"0"	"7.585E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTPVAIAAGR"	"[K].aLLTPVAIAAGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"691.43976"	"1381.87224"	"1381.87285"	"-0.44"	"-0.00031"	"8/88"	"8"	"88"	"7882733.50396729"	"HCD"	"MS2"	"1.930266"	"366.8"	"97.619"	"52.5748"	"15891"	"15891"	"15874"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"515.5"	""	"471.2"	""	"501.1"	""	"579.0"	""	"636.7"	"775.3"	""	"239"	"45"	"30.000"	"23.000"	"0.000369290304185374"	"19"	"0.0001308"	"0.0002608"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTPVAIAAGR"	"[K].aLLTPVAIAAGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"691.44006"	"1381.87285"	"1381.87285"	"0.00"	"0.00000"	"11/88"	"11"	"88"	"8286287.70617676"	"HCD"	"MS2"	"2.193722"	"385.3"	"97.257"	"52.7752"	"16023"	"16023"	"16006"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"502.5"	""	"499.2"	""	"535.3"	""	"629.6"	""	"694.9"	"799.4"	""	"239"	"49"	"30.000"	"23.000"	"0.000150441586709403"	"19"	"0.0001308"	"0.0002138"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"691.44348"	"1381.87969"	"1381.88191"	"-1.61"	"-0.00111"	"7/62"	"7"	"62"	"6906311.51989746"	"HCD"	"MS2"	"0"	"292.0"	"100.000"	"50.9798"	"15238"	"15238"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"335.6"	""	"346.5"	""	"364.3"	""	"534.7"	""	"592.4"	"602.9"	""	"207"	"31"	"30.000"	"23.000"	"0.00769024807723086"	""	"0.0003839"	"0.00206"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"691.44348"	"1381.87969"	"1381.88191"	"-1.61"	"-0.00111"	"7/62"	"7"	"62"	"6906311.51989746"	"HCD"	"MS2"	"0"	"292.0"	"100.000"	"50.9798"	"15238"	"15238"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"335.6"	""	"346.5"	""	"364.3"	""	"534.7"	""	"592.4"	"602.9"	""	"207"	"31"	"30.000"	"23.000"	"0.00769024807723086"	""	"0.0003839"	"0.00206"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"461.29828"	"1381.88028"	"1381.88191"	"-1.18"	"-0.00054"	"5/62"	"5"	"62"	"7897351.1159668"	"HCD"	"MS2"	"4.455251"	"235.5"	"100.000"	"51.3016"	"15420"	"15420"	"15398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.2"	""	"269.6"	""	"313.3"	""	"424.9"	""	"474.5"	"490.2"	""	"202"	"28"	"30.000"	"23.000"	"0.0165318468664209"	""	"0.0001889"	"0.001086"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"461.29828"	"1381.88028"	"1381.88191"	"-1.18"	"-0.00054"	"5/62"	"5"	"62"	"7897351.1159668"	"HCD"	"MS2"	"4.455251"	"235.5"	"100.000"	"51.3016"	"15420"	"15420"	"15398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.2"	""	"269.6"	""	"313.3"	""	"424.9"	""	"474.5"	"490.2"	""	"202"	"28"	"30.000"	"23.000"	"0.0165318468664209"	""	"0.0001889"	"0.001086"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"461.29837"	"1381.88056"	"1381.88191"	"-0.98"	"-0.00045"	"5/62"	"5"	"62"	"22875137.4772949"	"HCD"	"MS2"	"15.29979"	"313.1"	"44.847"	"52.0360"	"15720"	"15720"	"15702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"348.8"	""	"343.7"	""	"369.1"	""	"602.0"	""	"676.5"	"638.6"	""	"202"	"24"	"30.000"	"23.000"	"0.0422008670313088"	""	"0.0004166"	"0.002284"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"461.29837"	"1381.88056"	"1381.88191"	"-0.98"	"-0.00045"	"5/62"	"5"	"62"	"22875137.4772949"	"HCD"	"MS2"	"15.29979"	"313.1"	"44.847"	"52.0360"	"15720"	"15720"	"15702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"348.8"	""	"343.7"	""	"369.1"	""	"602.0"	""	"676.5"	"638.6"	""	"202"	"24"	"30.000"	"23.000"	"0.0422008670313088"	""	"0.0004166"	"0.002284"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"461.29837"	"1381.88056"	"1381.88191"	"-0.98"	"-0.00045"	"5/62"	"5"	"62"	"25317636.5856934"	"HCD"	"MS2"	"14.96117"	"352.6"	"49.190"	"51.8357"	"15588"	"15588"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.0"	""	"401.8"	""	"441.5"	""	"645.7"	""	"744.9"	"748.7"	""	"202"	"23"	"30.000"	"23.000"	"0.0544905728740279"	""	"0.000494"	"0.002649"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"461.29837"	"1381.88056"	"1381.88191"	"-0.98"	"-0.00045"	"5/62"	"5"	"62"	"25317636.5856934"	"HCD"	"MS2"	"14.96117"	"352.6"	"49.190"	"51.8357"	"15588"	"15588"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.0"	""	"401.8"	""	"441.5"	""	"645.7"	""	"744.9"	"748.7"	""	"202"	"23"	"30.000"	"23.000"	"0.0544905728740279"	""	"0.000494"	"0.002649"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"691.44409"	"1381.88091"	"1381.88191"	"-0.72"	"-0.00050"	"6/62"	"6"	"62"	"7547518.58660889"	"HCD"	"MS2"	"2.708186"	"371.7"	"100.000"	"51.6012"	"15492"	"15492"	"15474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"467.3"	""	"460.7"	""	"466.3"	""	"689.2"	"11.2"	"734.5"	"697.1"	""	"202"	"30"	"30.000"	"23.000"	"0.0101700098554032"	""	"0.0003839"	"0.001633"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"691.44409"	"1381.88091"	"1381.88191"	"-0.72"	"-0.00050"	"6/62"	"6"	"62"	"7547518.58660889"	"HCD"	"MS2"	"2.708186"	"371.7"	"100.000"	"51.6012"	"15492"	"15492"	"15474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"467.3"	""	"460.7"	""	"466.3"	""	"689.2"	"11.2"	"734.5"	"697.1"	""	"202"	"30"	"30.000"	"23.000"	"0.0101700098554032"	""	"0.0003839"	"0.001633"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"461.29849"	"1381.88092"	"1381.88191"	"-0.71"	"-0.00033"	"5/62"	"5"	"62"	"5575949.39276123"	"HCD"	"MS2"	"3.698942"	"171.2"	"100.000"	"50.9982"	"15296"	"15296"	"15270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"200.0"	""	"195.8"	""	"205.0"	""	"320.2"	"1.8"	"349.4"	"353.9"	""	"202"	"35"	"30.000"	"23.000"	"0.00343021525316313"	""	"0.0001889"	"0.000804"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"461.29849"	"1381.88092"	"1381.88191"	"-0.71"	"-0.00033"	"5/62"	"5"	"62"	"5575949.39276123"	"HCD"	"MS2"	"3.698942"	"171.2"	"100.000"	"50.9982"	"15296"	"15296"	"15270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"200.0"	""	"195.8"	""	"205.0"	""	"320.2"	"1.8"	"349.4"	"353.9"	""	"202"	"35"	"30.000"	"23.000"	"0.00343021525316313"	""	"0.0001889"	"0.000804"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"691.44415"	"1381.88103"	"1381.88191"	"-0.64"	"-0.00044"	"6/62"	"6"	"62"	"1229036.46899414"	"HCD"	"MS2"	"0"	"88.7"	"100.000"	"51.3043"	"15371"	"15371"	"15346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.5"	""	"116.0"	""	"110.8"	""	"147.6"	"9.6"	"177.2"	"168.9"	""	"202"	"22"	"30.000"	"23.000"	"0.0638735969889982"	""	"0.003197"	"0.06726"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"691.44415"	"1381.88103"	"1381.88191"	"-0.64"	"-0.00044"	"6/62"	"6"	"62"	"1229036.46899414"	"HCD"	"MS2"	"0"	"88.7"	"100.000"	"51.3043"	"15371"	"15371"	"15346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.5"	""	"116.0"	""	"110.8"	""	"147.6"	"9.6"	"177.2"	"168.9"	""	"202"	"22"	"30.000"	"23.000"	"0.0638735969889982"	""	"0.003197"	"0.06726"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"691.44415"	"1381.88103"	"1381.88191"	"-0.64"	"-0.00044"	"6/62"	"6"	"62"	"4632263.34692383"	"HCD"	"MS2"	"11.34447"	"217.4"	"100.000"	"51.0348"	"15311"	"15311"	"15286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.1"	""	"273.1"	""	"284.0"	""	"381.2"	"0.1"	"428.8"	"435.8"	""	"202"	"30"	"30.000"	"23.000"	"0.00908492557345336"	""	"0.0003146"	"0.001418"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"691.44415"	"1381.88103"	"1381.88191"	"-0.64"	"-0.00044"	"6/62"	"6"	"62"	"4632263.34692383"	"HCD"	"MS2"	"11.34447"	"217.4"	"100.000"	"51.0348"	"15311"	"15311"	"15286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.1"	""	"273.1"	""	"284.0"	""	"381.2"	"0.1"	"428.8"	"435.8"	""	"202"	"30"	"30.000"	"23.000"	"0.00908492557345336"	""	"0.0003146"	"0.001418"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"461.29858"	"1381.88120"	"1381.88191"	"-0.51"	"-0.00024"	"5/62"	"5"	"62"	"9140644.80462646"	"HCD"	"MS2"	"5.372615"	"262.7"	"96.469"	"51.0582"	"15270"	"15270"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"296.9"	""	"295.3"	""	"333.1"	""	"500.1"	""	"521.8"	"551.4"	""	"202"	"25"	"30.000"	"23.000"	"0.0300138269205541"	""	"0.0001889"	"0.0008456"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"461.29858"	"1381.88120"	"1381.88191"	"-0.51"	"-0.00024"	"5/62"	"5"	"62"	"9140644.80462646"	"HCD"	"MS2"	"5.372615"	"262.7"	"96.469"	"51.0582"	"15270"	"15270"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"296.9"	""	"295.3"	""	"333.1"	""	"500.1"	""	"521.8"	"551.4"	""	"202"	"25"	"30.000"	"23.000"	"0.0300138269205541"	""	"0.0001889"	"0.0008456"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"691.44427"	"1381.88127"	"1381.88191"	"-0.46"	"-0.00032"	"6/62"	"6"	"62"	"6616548.17523193"	"HCD"	"MS2"	"9.599947"	"330.2"	"100.000"	"51.7735"	"15613"	"15613"	"15590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"386.5"	""	"396.8"	""	"394.3"	""	"617.6"	"12.2"	"689.0"	"639.4"	""	"202"	"31"	"30.000"	"23.000"	"0.00759139122958388"	""	"0.0003839"	"0.001709"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"691.44427"	"1381.88127"	"1381.88191"	"-0.46"	"-0.00032"	"6/62"	"6"	"62"	"6616548.17523193"	"HCD"	"MS2"	"9.599947"	"330.2"	"100.000"	"51.7735"	"15613"	"15613"	"15590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"386.5"	""	"396.8"	""	"394.3"	""	"617.6"	"12.2"	"689.0"	"639.4"	""	"202"	"31"	"30.000"	"23.000"	"0.00759139122958388"	""	"0.0003839"	"0.001709"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"461.29861"	"1381.88129"	"1381.88191"	"-0.45"	"-0.00021"	"6/62"	"6"	"62"	"6090855.29437256"	"HCD"	"MS2"	"4.529908"	"185.6"	"100.000"	"51.7136"	"15589"	"15589"	"15558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.0"	""	"212.3"	""	"219.5"	""	"364.3"	""	"371.8"	"381.5"	""	"202"	"23"	"30.000"	"23.000"	"0.0507366015417611"	""	"0.0002277"	"0.001195"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"461.29861"	"1381.88129"	"1381.88191"	"-0.45"	"-0.00021"	"6/62"	"6"	"62"	"6090855.29437256"	"HCD"	"MS2"	"4.529908"	"185.6"	"100.000"	"51.7136"	"15589"	"15589"	"15558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.0"	""	"212.3"	""	"219.5"	""	"364.3"	""	"371.8"	"381.5"	""	"202"	"23"	"30.000"	"23.000"	"0.0507366015417611"	""	"0.0002277"	"0.001195"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"461.29868"	"1381.88147"	"1381.88191"	"-0.31"	"-0.00014"	"5/62"	"5"	"62"	"4338627.5737915"	"HCD"	"MS2"	"5.366591"	"135.5"	"100.000"	"50.7657"	"15151"	"15151"	"15122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.7"	""	"157.9"	""	"167.3"	""	"241.4"	"0.9"	"271.3"	"294.9"	""	"202"	"32"	"30.000"	"23.000"	"0.0062563548582755"	""	"0.0001889"	"0.0007804"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"461.29868"	"1381.88147"	"1381.88191"	"-0.31"	"-0.00014"	"5/62"	"5"	"62"	"4338627.5737915"	"HCD"	"MS2"	"5.366591"	"135.5"	"100.000"	"50.7657"	"15151"	"15151"	"15122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.7"	""	"157.9"	""	"167.3"	""	"241.4"	"0.9"	"271.3"	"294.9"	""	"202"	"32"	"30.000"	"23.000"	"0.0062563548582755"	""	"0.0001889"	"0.0007804"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"691.44446"	"1381.88164"	"1381.88191"	"-0.19"	"-0.00013"	"6/62"	"6"	"62"	"4266346.30010986"	"HCD"	"MS2"	"2.535011"	"198.2"	"100.000"	"51.3337"	"15433"	"15433"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.9"	""	"231.1"	""	"251.7"	""	"353.3"	""	"399.9"	"418.0"	""	"210"	"33"	"30.000"	"23.000"	"0.0052022270034503"	""	"0.0003839"	"0.001744"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"691.44446"	"1381.88164"	"1381.88191"	"-0.19"	"-0.00013"	"6/62"	"6"	"62"	"4266346.30010986"	"HCD"	"MS2"	"2.535011"	"198.2"	"100.000"	"51.3337"	"15433"	"15433"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.9"	""	"231.1"	""	"251.7"	""	"353.3"	""	"399.9"	"418.0"	""	"210"	"33"	"30.000"	"23.000"	"0.0052022270034503"	""	"0.0003839"	"0.001744"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVQLPK"	"[QR].iPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"461.29874"	"1381.88166"	"1381.88191"	"-0.18"	"-0.00008"	"6/62"	"6"	"62"	"7172041.04290771"	"HCD"	"MS2"	"5.411736"	"214.3"	"100.000"	"51.5439"	"15469"	"15469"	"15442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.4"	""	"230.4"	""	"268.4"	""	"401.7"	""	"426.5"	"448.7"	""	"210"	"26"	"30.000"	"23.000"	"0.0275542947055367"	""	"0.0001889"	"0.0008967"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEVQLPK"	"[QR].lPEVQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"461.29874"	"1381.88166"	"1381.88191"	"-0.18"	"-0.00008"	"6/62"	"6"	"62"	"7172041.04290771"	"HCD"	"MS2"	"5.411736"	"214.3"	"100.000"	"51.5439"	"15469"	"15469"	"15442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.4"	""	"230.4"	""	"268.4"	""	"401.7"	""	"426.5"	"448.7"	""	"210"	"26"	"30.000"	"23.000"	"0.0275542947055367"	""	"0.0001889"	"0.0008967"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAPPERK"	"[K].iIAPPERk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"0.2727"	"0.0000"	"1"	"1"	"1"	"461.30267"	"1381.89347"	"1381.89314"	"0.24"	"0.00011"	"7/58"	"7"	"58"	"36276341.5852051"	"HCD"	"MS2"	"23.28415"	"640.2"	"31.598"	"31.3515"	"7242"	"7242"	"7222"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1207.4"	""	"1032.1"	""	"911.2"	""	"866.7"	""	"968.5"	"1073.1"	""	"157"	"11"	"28.000"	"21.000"	"0.694815753717205"	"21"	"0.005946"	"0.1985"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAPPERK"	"[K].iIAPPERk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"461.30280"	"1381.89383"	"1381.89314"	"0.50"	"0.00023"	"9/58"	"9"	"58"	"30666160.3106689"	"HCD"	"MS2"	"25.66845"	"769.6"	"44.443"	"31.4659"	"7331"	"7331"	"7311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1450.1"	""	"1248.7"	""	"1106.4"	""	"1043.4"	""	"1205.3"	"1221.1"	""	"157"	"9"	"28.000"	"21.000"	"0.952510247615006"	"19"	"0.006627"	"0.2421"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFENNWK"	"[R].sFENNWk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"691.87604"	"1382.74480"	"1382.74687"	"-1.50"	"-0.00104"	"6/58"	"6"	"58"	"3716432.02563477"	"HCD"	"MS2"	"21.20025"	"412.7"	"100.000"	"38.8185"	"10293"	"10293"	"10262"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"632.2"	""	"547.2"	""	"574.1"	""	"649.6"	""	"765.2"	"744.7"	""	"783"	"26"	"35.000"	"28.000"	"0.0880504878184708"	"20"	"0.000523"	"0.002844"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFENNWK"	"[R].sFENNWk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"691.87695"	"1382.74663"	"1382.74687"	"-0.17"	"-0.00012"	"6/58"	"6"	"58"	"3962734.11560059"	"HCD"	"MS2"	"0"	"405.9"	"100.000"	"38.9527"	"10391"	"10391"	"10366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"604.1"	""	"549.6"	""	"570.5"	""	"656.9"	""	"734.8"	"731.6"	""	"769"	"27"	"35.000"	"28.000"	"0.0852896523413184"	"20"	"0.0006037"	"0.004354"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWYTVDK"	"[K].lWYTVDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"691.90747"	"1382.80766"	"1382.80841"	"-0.54"	"-0.00037"	"6/52"	"6"	"52"	"25787522.0209961"	"HCD"	"MS2"	"31.8788"	"823.4"	"48.963"	"51.7141"	"15539"	"15539"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"862.7"	""	"923.8"	""	"981.7"	""	"1506.3"	""	"1936.1"	"1623.8"	""	"572"	"22"	"34.000"	"27.000"	"0.164955208530184"	"19"	"0.001966"	"0.02971"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWYTVDK"	"[K].lWYTVDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"691.90771"	"1382.80815"	"1382.80841"	"-0.18"	"-0.00013"	"5/52"	"5"	"52"	"5515003.73266602"	"HCD"	"MS2"	"42.34938"	"408.2"	"96.054"	"52.0364"	"15670"	"15670"	"15650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"489.4"	""	"526.3"	""	"556.4"	""	"650.3"	""	"843.6"	"814.9"	""	"575"	"21"	"34.000"	"27.000"	"0.235308626588752"	"19"	"0.001058"	"0.01365"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETIFSISK"	"[K].eTIFSISk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"691.90784"	"1382.80840"	"1382.82954"	"-15.29"	"-0.01057"	"7/68"	"7"	"68"	"4981026.60742188"	"HCD"	"MS2"	"0"	"403.5"	"100.000"	"49.5186"	"14647"	"14647"	"14623"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"463.1"	""	"441.1"	""	"476.5"	""	"860.6"	"0.9"	"801.1"	"786.4"	""	"575"	"18"	"34.000"	"27.000"	"0.407979037485614"	"21"	"0.001846"	"0.02602"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWYTVDK"	"[K].lWYTVDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"691.90833"	"1382.80937"	"1382.80841"	"0.70"	"0.00048"	"5/52"	"5"	"52"	"5293466.79138184"	"HCD"	"MS2"	"32.17636"	"395.2"	"100.000"	"52.2387"	"15803"	"15803"	"15782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"501.7"	""	"479.5"	""	"528.4"	""	"627.8"	"0.9"	"830.7"	"782.8"	""	"573"	"21"	"34.000"	"27.000"	"0.227051631182655"	"19"	"0.0008731"	"0.009447"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWYTVDK"	"[K].lWYTVDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"691.90839"	"1382.80950"	"1382.80841"	"0.79"	"0.00054"	"10/52"	"10"	"52"	"26506641.9046631"	"HCD"	"MS2"	"36.88862"	"872.9"	"53.736"	"51.9188"	"15672"	"15672"	"15654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"911.1"	""	"971.7"	""	"1076.4"	""	"1599.5"	""	"2033.8"	"1717.0"	""	"573"	"28"	"34.000"	"27.000"	"0.0509477050976152"	"21"	"0.001966"	"0.02919"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DFIDTYLLR"	"[R].dFIDTYLLR.[M]"	"N-Term(TMT6plex)"	"1"	"3"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P33272; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"692.88708"	"1384.76689"	"1384.76738"	"-0.35"	"-0.00024"	"6/72"	"6"	"72"	"8420429.45263672"	"HCD"	"MS2"	"6.97164"	"347.0"	"86.118"	"67.7554"	"22110"	"22110"	"22090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"556.3"	""	"493.2"	""	"496.6"	""	"513.4"	""	"563.3"	"661.9"	""	"697"	"49"	"35.000"	"28.000"	"0.000466877325567939"	"22"	"0.0001859"	"0.0003159"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DFINTYLLR"	"[].dFInTYLLR.[]"	"N-Term(TMT6plex); N4(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"692.88708"	"1384.76689"	"1384.76738"	"-0.35"	"-0.00024"	"6/82"	"6"	"82"	"8420429.45263672"	"HCD"	"MS2"	"6.97164"	"347.0"	"86.118"	"67.7554"	"22110"	"22110"	"22090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"556.3"	""	"493.2"	""	"496.6"	""	"513.4"	""	"563.3"	"661.9"	""	"697"	"49"	"35.000"	"28.000"	"0.000466877325567939"	"22"	"0.0001859"	"0.0003159"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DFIDTYLLR"	"[R].dFIDTYLLR.[M]"	"N-Term(TMT6plex)"	"1"	"3"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P33272; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"692.88751"	"1384.76775"	"1384.76738"	"0.26"	"0.00018"	"6/72"	"6"	"72"	"7462125.94555664"	"HCD"	"MS2"	"4.651016"	"345.3"	"100.000"	"67.9107"	"22123"	"22123"	"22106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"525.2"	""	"521.1"	""	"461.2"	""	"513.8"	""	"587.7"	"662.2"	""	"725"	"45"	"35.000"	"28.000"	"0.00102637959847727"	"20"	"0.0001889"	"0.0004306"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DFINTYLLR"	"[].dFInTYLLR.[]"	"N-Term(TMT6plex); N4(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"692.88751"	"1384.76775"	"1384.76738"	"0.26"	"0.00018"	"6/82"	"6"	"82"	"7462125.94555664"	"HCD"	"MS2"	"4.651016"	"345.3"	"100.000"	"67.9107"	"22123"	"22123"	"22106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"525.2"	""	"521.1"	""	"461.2"	""	"513.8"	""	"587.7"	"662.2"	""	"725"	"45"	"35.000"	"28.000"	"0.00102637959847727"	"20"	"0.0001889"	"0.0004306"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFESWMK"	"[K].vFESWMk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10247"	"H-2 class II histocompatibility antigen gamma chain OS=Rattus norvegicus OX=10116 GN=Cd74 PE=1 SV=2"	"P10247"	"H-2 class II histocompatibility antigen gamma chain OS=Rattus norvegicus OX=10116 GN=Cd74 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"692.88782"	"1384.76836"	"1384.76991"	"-1.12"	"-0.00078"	"6/50"	"6"	"50"	"4057480.53546143"	"HCD"	"MS2"	"41.11393"	"329.9"	"100.000"	"57.3321"	"17868"	"17868"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"480.2"	""	"427.5"	""	"436.8"	""	"503.0"	""	"621.5"	"659.1"	""	"708"	"15"	"35.000"	"28.000"	"1.10663209596188"	"17"	"0.0006037"	"0.004295"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFESWMK"	"[K].vFESWMk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10247"	"H-2 class II histocompatibility antigen gamma chain OS=Rattus norvegicus OX=10116 GN=Cd74 PE=1 SV=2"	"P10247"	"H-2 class II histocompatibility antigen gamma chain OS=Rattus norvegicus OX=10116 GN=Cd74 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"692.88867"	"1384.77007"	"1384.76991"	"0.11"	"0.00008"	"6/50"	"6"	"50"	"3584865.1529541"	"HCD"	"MS2"	"39.51395"	"293.6"	"100.000"	"57.0847"	"17713"	"17713"	"17691"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"419.8"	""	"383.8"	""	"386.1"	""	"455.6"	"2.3"	"552.1"	"583.4"	""	"684"	"24"	"35.000"	"28.000"	"0.147579524275096"	"18"	"0.000523"	"0.003163"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSSNSYAIK"	"[K].gSSNSYAIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"692.89520"	"1384.78313"	"1384.78365"	"-0.38"	"-0.00026"	"8/80"	"8"	"80"	"449003.91796875"	"HCD"	"MS2"	"0"	"39.9"	"100.000"	"30.6330"	"6951"	"6951"	"6920"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.2"	""	"58.8"	""	"65.5"	""	"60.0"	""	"66.5"	"55.8"	""	"642"	"40"	"35.000"	"28.000"	"0.00324717004817427"	""	"0"	"0.0001557"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"MLTFLMLVR"	"[K].mLTFLmLVR.[L]"	"N-Term(TMT6plex); M1(Oxidation); M6(Oxidation)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"692.89893"	"1384.79057"	"1384.78938"	"0.86"	"0.00060"	"7/64"	"7"	"64"	"1024664.29919434"	"HCD"	"MS2"	"8.09473"	"60.8"	"100.000"	"65.2773"	"21055"	"21055"	"21033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.0"	""	"56.9"	""	"59.1"	""	"180.8"	"1.5"	"117.4"	"112.0"	""	"671"	"17"	"35.000"	"28.000"	"0.740785587927841"	"17"	"0.002953"	"0.05363"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGVPVR"	"[K].fLVGPDGVPVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"692.91077"	"1384.81426"	"1384.81500"	"-0.54"	"-0.00037"	"6/80"	"6"	"80"	"3788936.93261719"	"HCD"	"MS2"	"33.6704"	"169.6"	"100.000"	"51.0969"	"15336"	"15336"	"15318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"239.2"	""	"240.6"	""	"268.8"	""	"288.8"	"0.9"	"283.0"	"283.3"	""	"548"	"48"	"34.000"	"27.000"	"0.000487248558350665"	"22"	"0.0001889"	"0.001041"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGVPVR"	"[K].fLVGPDGVPVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"692.91144"	"1384.81560"	"1384.81500"	"0.43"	"0.00030"	"6/80"	"6"	"80"	"3416444.89355469"	"HCD"	"MS2"	"26.88147"	"161.7"	"100.000"	"50.8207"	"15173"	"15173"	"15154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.1"	""	"213.7"	""	"251.1"	""	"269.6"	""	"277.9"	"273.7"	""	"551"	"44"	"34.000"	"27.000"	"0.00117252362818346"	"22"	"0.0001889"	"0.0004256"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGVPVR"	"[K].fLVGPDGVPVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"692.91156"	"1384.81584"	"1384.81500"	"0.61"	"0.00042"	"6/80"	"6"	"80"	"2893764.08551025"	"HCD"	"MS2"	"0"	"150.3"	"100.000"	"50.7593"	"15198"	"15198"	"15174"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.3"	""	"207.7"	""	"239.1"	""	"244.9"	""	"249.4"	"254.9"	""	"551"	"48"	"34.000"	"27.000"	"0.000436638074523037"	"23"	"0.0001889"	"0.001011"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGVPVR"	"[K].fLVGPDGVPVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"692.91193"	"1384.81658"	"1384.81500"	"1.14"	"0.00079"	"6/80"	"6"	"80"	"2628870.38146973"	"HCD"	"MS2"	"14.68184"	"148.3"	"100.000"	"50.5291"	"15054"	"15054"	"15026"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.7"	""	"208.4"	""	"252.1"	""	"236.3"	"0.2"	"233.9"	"241.4"	""	"539"	"44"	"34.000"	"27.000"	"0.0011549382624711"	"22"	"0.0001859"	"0.0003404"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFFVGLSK"	"[R].eFFVGLSk.[RW]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557; Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3; N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"462.27820"	"1384.82004"	"1384.82406"	"-2.90"	"-0.00134"	"5/68"	"5"	"68"	"3815739.17443848"	"HCD"	"MS2"	"38.19914"	"130.9"	"100.000"	"57.6549"	"18000"	"18000"	"17973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.0"	""	"179.2"	""	"176.9"	""	"232.6"	""	"249.0"	"256.1"	""	"526"	"18"	"34.000"	"27.000"	"0.451809905822446"	"14"	"0.0004166"	"0.002105"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFFVGLSK"	"[R].eFFVGLSk.[RW]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557; Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3; N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"692.91431"	"1384.82134"	"1384.82406"	"-1.97"	"-0.00136"	"7/68"	"7"	"68"	"1724097.31713867"	"HCD"	"MS2"	"0"	"147.5"	"100.000"	"57.8850"	"18094"	"18094"	"18069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.2"	""	"181.7"	""	"199.5"	""	"234.9"	""	"298.3"	"302.5"	""	"511"	"41"	"34.000"	"27.000"	"0.00213005542670317"	"20"	"0.0001889"	"0.0004764"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFFVGLSK"	"[R].eFFVGLSk.[RW]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557; Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3; N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"692.91473"	"1384.82219"	"1384.82406"	"-1.35"	"-0.00093"	"7/68"	"7"	"68"	"12461499.2483521"	"HCD"	"MS2"	"5.34676"	"1012.6"	"100.000"	"57.5557"	"17959"	"17959"	"17941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1206.3"	""	"1379.3"	""	"1337.0"	""	"1736.2"	""	"1931.7"	"2020.4"	""	"514"	"42"	"34.000"	"27.000"	"0.00174555333582616"	"20"	"0.0001889"	"0.0009533"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFFVGLSK"	"[R].eFFVGLSk.[RW]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557; Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3; N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"692.91504"	"1384.82280"	"1384.82406"	"-0.91"	"-0.00063"	"7/68"	"7"	"68"	"11334716.6357422"	"HCD"	"MS2"	"8.828963"	"881.3"	"100.000"	"57.3497"	"17821"	"17821"	"17803"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1014.3"	""	"1193.0"	""	"1218.9"	""	"1509.3"	""	"1689.2"	"1739.4"	""	"483"	"39"	"33.000"	"26.000"	"0.00272218185666386"	"21"	"0.0001889"	"0.0009939"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFFVGLSK"	"[R].eFFVGLSk.[RW]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557; Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3; N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"462.27927"	"1384.82325"	"1384.82406"	"-0.59"	"-0.00027"	"5/68"	"5"	"68"	"3389364.57855225"	"HCD"	"MS2"	"35.74814"	"115.9"	"100.000"	"57.4789"	"17874"	"17874"	"17851"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.0"	""	"138.3"	""	"161.8"	""	"191.5"	""	"232.6"	"239.9"	""	"483"	"16"	"33.000"	"26.000"	"0.592812203137934"	"14"	"0.0003839"	"0.001829"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFFVGLSK"	"[R].eFFVGLSk.[RW]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557; Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3; N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"692.91534"	"1384.82341"	"1384.82406"	"-0.47"	"-0.00032"	"7/68"	"7"	"68"	"1770433.52185059"	"HCD"	"MS2"	"0"	"148.3"	"100.000"	"57.6792"	"17956"	"17956"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.7"	""	"186.2"	""	"194.7"	""	"255.7"	""	"295.5"	"314.7"	""	"483"	"39"	"33.000"	"26.000"	"0.00301937555797579"	"18"	"0.0001889"	"0.0003821"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTFAPTYK"	"[K].vTFAPTYk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"692.91553"	"1384.82378"	"1384.82406"	"-0.20"	"-0.00014"	"6/64"	"6"	"64"	"2131736.96118164"	"HCD"	"MS2"	"0"	"199.0"	"100.000"	"42.2030"	"11719"	"11719"	"11701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"297.8"	""	"281.3"	""	"287.3"	""	"284.3"	""	"373.6"	"363.1"	""	"490"	"24"	"33.000"	"26.000"	"0.10003824965151"	"15"	"0.0006037"	"0.00539"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVHSGATK"	"[R].nLVHSGATk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.91852"	"1384.82976"	"1384.83127"	"-1.09"	"-0.00075"	"3/86"	"3"	"86"	"182732.171020508"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"25.0653"	"4761"	"4761"	"4732"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.4"	""	"23.6"	""	"24.3"	""	"17.9"	""	"24.1"	"27.6"	""	"454"	"4"	"33.000"	"26.000"	"10.1163968386233"	"13"	"0.006596"	"0.2405"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVHSGATK"	"[R].nLVHSGATk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"462.28146"	"1384.82984"	"1384.83127"	"-1.03"	"-0.00048"	"12/86"	"12"	"86"	"7585980.10302734"	"HCD"	"MS2"	"23.04819"	"328.9"	"100.000"	"24.9736"	"4723"	"4723"	"4704"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"517.9"	""	"443.4"	""	"490.7"	""	"507.9"	"4.8"	"587.9"	"560.0"	""	"454"	"29"	"33.000"	"26.000"	"0.0313347228064855"	"15"	"0"	"0.0001755"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVHSGATK"	"[R].nLVHSGATk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"462.28146"	"1384.82984"	"1384.83127"	"-1.03"	"-0.00048"	"12/86"	"12"	"86"	"7833409.03259277"	"HCD"	"MS2"	"31.59468"	"314.9"	"100.000"	"24.9102"	"4662"	"4662"	"4642"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.0"	""	"439.3"	""	"465.9"	""	"475.8"	""	"556.0"	"571.5"	""	"454"	"31"	"33.000"	"26.000"	"0.0201848653753754"	"18"	"0.0001308"	"0.0002859"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLVTGAGGGLGR"	"[R].vVLVTGAGGGLGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"692.92627"	"1384.84526"	"1384.84736"	"-1.52"	"-0.00105"	"11/96"	"11"	"96"	"4388005.4119873"	"HCD"	"MS2"	"12.92887"	"279.1"	"100.000"	"42.7655"	"11904"	"11904"	"11884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"416.9"	""	"416.1"	""	"393.8"	""	"444.3"	"17.0"	"468.5"	"484.5"	""	"420"	"47"	"33.000"	"26.000"	"0.000379506566462294"	"18"	"0"	"8.902E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVPTGFVLPIR"	"[K].gVPTGFVLPIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"692.92877"	"1384.85027"	"1384.85139"	"-0.81"	"-0.00056"	"10/80"	"10"	"80"	"6133453.87860107"	"HCD"	"MS2"	"8.057456"	"237.6"	"99.518"	"60.5672"	"19131"	"19131"	"19113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.3"	""	"378.0"	""	"339.3"	""	"365.1"	""	"429.4"	"406.6"	""	"386"	"41"	"32.000"	"25.000"	"0.00163891831682009"	"21"	"0"	"7.354E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVPTGFVLPIR"	"[K].gVPTGFVLPIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"692.92889"	"1384.85051"	"1384.85139"	"-0.63"	"-0.00044"	"8/80"	"8"	"80"	"5981599.30175781"	"HCD"	"MS2"	"2.619204"	"242.6"	"100.000"	"60.7354"	"19253"	"19253"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"356.8"	""	"358.4"	""	"345.8"	""	"379.1"	"0.4"	"443.5"	"412.6"	""	"386"	"41"	"32.000"	"25.000"	"0.00163138817115936"	"21"	"0"	"7.825E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLPAVLNPR"	"[R].yLLPAVLNPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"692.92914"	"1384.85100"	"1384.85139"	"-0.28"	"-0.00019"	"7/78"	"7"	"78"	"4990476.15844727"	"HCD"	"MS2"	"0"	"196.7"	"100.000"	"60.1034"	"18996"	"18996"	"18979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.2"	""	"260.7"	""	"265.5"	""	"359.0"	"1.3"	"346.8"	"342.0"	""	"383"	"41"	"32.000"	"25.000"	"0.00144933499396517"	"16"	"0"	"0.0001252"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLPAVLNPR"	"[R].yLLPAVLNPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"692.92938"	"1384.85149"	"1384.85139"	"0.07"	"0.00005"	"7/78"	"7"	"78"	"2035485.25506592"	"HCD"	"MS2"	"4.57547"	"98.5"	"100.000"	"60.4287"	"19128"	"19128"	"19107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.7"	""	"146.4"	""	"132.9"	""	"163.2"	"0.4"	"176.6"	"176.5"	""	"389"	"38"	"32.000"	"25.000"	"0.00306845391956523"	"21"	"0"	"0.0001609"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLPAVLNPR"	"[R].yLLPAVLNPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"692.92987"	"1384.85246"	"1384.85139"	"0.78"	"0.00054"	"7/78"	"7"	"78"	"2102918.62213135"	"HCD"	"MS2"	"17.98958"	"109.4"	"100.000"	"60.2630"	"19007"	"19007"	"18985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.3"	""	"160.3"	""	"147.1"	""	"190.7"	"0.7"	"206.4"	"190.1"	""	"376"	"38"	"32.000"	"25.000"	"0.00285205469082355"	"20"	"0"	"0.0001736"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLPAVLNPR"	"[R].yLLPAVLNPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"692.93054"	"1384.85381"	"1384.85139"	"1.75"	"0.00121"	"7/78"	"7"	"78"	"4919946.59985352"	"HCD"	"MS2"	"0"	"198.3"	"100.000"	"59.9471"	"18878"	"18878"	"18857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.3"	""	"248.7"	""	"282.4"	""	"342.5"	"2.4"	"355.0"	"366.6"	""	"366"	"40"	"32.000"	"25.000"	"0.00193843431707444"	"16"	"0"	"0.000154"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPFLTALK"	"[R].hPFLTALk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P47196"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1"	"P47196; P47197"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1; RAC-beta serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt2 PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"462.29462"	"1384.86930"	"1384.87168"	"-1.72"	"-0.00079"	"6/56"	"6"	"56"	"6932231.56134033"	"HCD"	"MS2"	"3.507102"	"286.3"	"100.000"	"38.5781"	"10194"	"10194"	"10167"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"375.5"	""	"404.8"	""	"440.4"	""	"441.4"	""	"534.0"	"520.8"	""	"322"	"25"	"32.000"	"25.000"	"0.0461132653154959"	"18"	"0.0001889"	"0.0006521"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPFLTALK"	"[R].hPFLTALk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P47196"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1"	"P47196; P47197"	"RAC-alpha serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt1 PE=1 SV=1; RAC-beta serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Akt2 PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"462.29504"	"1384.87058"	"1384.87168"	"-0.79"	"-0.00037"	"6/56"	"6"	"56"	"9735779.12164307"	"HCD"	"MS2"	"19.25282"	"406.8"	"98.262"	"38.6891"	"10283"	"10283"	"10257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"518.1"	""	"562.4"	""	"599.0"	""	"664.2"	""	"771.3"	"749.4"	""	"312"	"29"	"31.000"	"24.000"	"0.0200043570894339"	"21"	"0.0001889"	"0.0006049"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGIFQFDGPL"	"[K].yGIFQFDGPL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.36761"	"1385.72795"	"1385.73027"	"-1.67"	"-0.00116"	"6/72"	"6"	"72"	"152902.386291504"	"HCD"	"MS2"	"22.8255"	"6.8"	"100.000"	"89.9732"	"31060"	"31060"	"31046"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.5"	""	"10.7"	""	"9.1"	""	"10.5"	""	"11.9"	"11.4"	""	"656"	"42"	"35.000"	"28.000"	"0.00225358448324668"	"15"	"0.0006037"	"0.005017"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGIFQFDGPL"	"[K].yGIFQFDGPL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.36804"	"1385.72881"	"1385.73027"	"-1.05"	"-0.00073"	"4/72"	"4"	"72"	"238285.229980469"	"HCD"	"MS2"	"38.35226"	"8.5"	"100.000"	"90.1400"	"31089"	"31089"	"31083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"10.6"	""	"15.2"	""	"15.6"	""	"13.8"	"15.2"	""	"645"	"6"	"35.000"	"28.000"	"8.32778911479658"	"13"	"0.007874"	"0.3212"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGIFQFDGPL"	"[K].yGIFQFDGPL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.36829"	"1385.72930"	"1385.73027"	"-0.70"	"-0.00049"	"6/72"	"6"	"72"	"161289.821777344"	"HCD"	"MS2"	"35.78256"	"7.3"	"100.000"	"89.8745"	"30989"	"30989"	"30973"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.2"	""	"14.2"	""	"12.0"	""	"9.0"	""	"14.5"	"11.7"	""	"652"	"36"	"35.000"	"28.000"	"0.00778426478229695"	"15"	"0.0003839"	"0.001956"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFLVNSFLK"	"[-].mFLVNSFLk.[G]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"693.38812"	"1385.76897"	"1385.77003"	"-0.76"	"-0.00053"	"9/72"	"9"	"72"	"413823.293884277"	"HCD"	"MS2"	"9.214162"	"18.1"	"100.000"	"88.7626"	"30620"	"30620"	"30612"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"15.2"	""	"20.2"	""	"63.6"	""	"35.5"	"26.9"	""	"699"	"37"	"35.000"	"28.000"	"0.00761109565437429"	"17"	"0.0002277"	"0.001264"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFLVNSFLK"	"[-].mFLVNSFLk.[G]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"693.38837"	"1385.76946"	"1385.77003"	"-0.41"	"-0.00028"	"9/72"	"9"	"72"	"365124.719909668"	"HCD"	"MS2"	"8.991926"	"15.9"	"100.000"	"88.4828"	"30510"	"30510"	"30498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.4"	""	"16.2"	""	"21.7"	""	"56.4"	""	"27.8"	"19.3"	""	"697"	"35"	"35.000"	"28.000"	"0.010744910006619"	"17"	"0.0001889"	"0.0009954"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFLVNSFLK"	"[-].mFLVNSFLk.[G]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"693.38873"	"1385.77019"	"1385.77003"	"0.12"	"0.00008"	"9/72"	"9"	"72"	"393008.450805664"	"HCD"	"MS2"	"12.58027"	"17.0"	"100.000"	"88.6786"	"30547"	"30547"	"30537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"11.7"	""	"18.4"	""	"67.2"	"1.0"	"27.2"	"29.9"	""	"697"	"38"	"35.000"	"28.000"	"0.00506060898729328"	"19"	"0.0003146"	"0.001434"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFLVNSFLK"	"[-].mFLVNSFLk.[G]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"693.38916"	"1385.77104"	"1385.77003"	"0.73"	"0.00051"	"6/72"	"6"	"72"	"469836.161254883"	"HCD"	"MS2"	"11.68894"	"20.4"	"100.000"	"88.4007"	"30437"	"30437"	"30429"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.4"	""	"16.9"	""	"21.4"	""	"72.3"	""	"34.4"	"33.0"	""	"696"	"48"	"35.000"	"28.000"	"0.000505334842920533"	"17"	"0.0002277"	"0.001194"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHSIQIMK"	"[R].aHSIQIMk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"462.61572"	"1385.83261"	"1385.83391"	"-0.94"	"-0.00043"	"6/62"	"6"	"62"	"19773274.0322876"	"HCD"	"MS2"	"33.19103"	"693.5"	"96.093"	"31.5140"	"7309"	"7309"	"7286"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1033.4"	"19.4"	"1132.7"	""	"1143.8"	""	"790.4"	"0.4"	"1221.3"	"1221.9"	""	"556"	"34"	"34.000"	"27.000"	"0.0108403872296079"	"17"	"0.0001889"	"0.0003968"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLTPQGQR"	"[R].kLTPQGQR.[D]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"462.62500"	"1385.86045"	"1385.86290"	"-1.77"	"-0.00082"	"10/70"	"10"	"70"	"12398362.164856"	"HCD"	"MS2"	"26.92039"	"676.2"	"100.000"	"23.9125"	"4255"	"4255"	"4239"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1045.1"	""	"977.5"	""	"1076.4"	""	"1216.0"	""	"1221.8"	"857.3"	""	"366"	"5"	"32.000"	"25.000"	"5.55202086707551"	"13"	"0.001217"	"0.0179"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYWFLK"	"[R].dGYWFLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97839"	"Disks large-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Dlgap4 PE=1 SV=1"	"P97839"	"Disks large-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Dlgap4 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"693.89435"	"1386.78142"	"1386.78219"	"-0.56"	"-0.00039"	"4/48"	"4"	"48"	"2019096.47363281"	"HCD"	"MS2"	"38.05236"	"169.7"	"100.000"	"62.1964"	"19797"	"19797"	"19769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.0"	""	"202.9"	""	"211.9"	""	"290.0"	""	"331.3"	"341.9"	""	"761"	"18"	"35.000"	"28.000"	"0.594777678024882"	"23"	"0.0006037"	"0.005341"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFMQEFK"	"[K].vFMQEFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"693.89594"	"1386.78459"	"1386.78556"	"-0.70"	"-0.00049"	"12/54"	"12"	"54"	"10946876.1543579"	"HCD"	"MS2"	"0"	"895.3"	"100.000"	"52.2759"	"15818"	"15818"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1464.7"	""	"1376.8"	""	"1320.7"	""	"1097.3"	"5.1"	"1596.7"	"1612.0"	""	"754"	"31"	"35.000"	"28.000"	"0.0279473960970446"	"27"	"0.0008453"	"0.008265"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFMQEFK"	"[K].vFMQEFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"693.89624"	"1386.78520"	"1386.78556"	"-0.26"	"-0.00018"	"12/54"	"12"	"54"	"9986890.81689453"	"HCD"	"MS2"	"0"	"835.3"	"100.000"	"52.0728"	"15685"	"15685"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1365.8"	""	"1297.3"	""	"1215.8"	""	"1012.6"	""	"1489.7"	"1526.7"	""	"757"	"31"	"35.000"	"28.000"	"0.0280585926332397"	"27"	"0.0006037"	"0.004722"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGVYNPNK"	"[K].hGVYNPNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"462.93420"	"1386.78806"	"1386.78940"	"-0.97"	"-0.00045"	"8/64"	"8"	"64"	"3267173.56347656"	"HCD"	"MS2"	"30.75228"	"161.5"	"100.000"	"24.2764"	"4438"	"4438"	"4413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.6"	""	"198.3"	""	"237.9"	""	"263.2"	""	"288.9"	"288.7"	""	"799"	"17"	"36.000"	"29.000"	"0.894369094858052"	"16"	"0.0002277"	"0.001138"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGVYNPNK"	"[K].hGVYNPNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"462.93454"	"1386.78907"	"1386.78940"	"-0.24"	"-0.00011"	"8/64"	"8"	"64"	"3457561.71551514"	"HCD"	"MS2"	"19.02558"	"164.3"	"100.000"	"24.2287"	"4385"	"4385"	"4358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.9"	""	"207.0"	""	"222.7"	""	"263.8"	""	"288.1"	"303.9"	""	"792"	"16"	"35.000"	"28.000"	"0.921924138035344"	"17"	"0.0002277"	"0.001192"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWALDIAELR"	"[R].aWALDIAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"693.90039"	"1386.79350"	"1386.79427"	"-0.55"	"-0.00038"	"8/78"	"8"	"78"	"921878.632263184"	"HCD"	"MS2"	"35.65153"	"55.9"	"100.000"	"67.3211"	"21934"	"21934"	"21914"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.6"	""	"76.4"	""	"88.5"	""	"89.5"	"0.5"	"100.8"	"103.6"	""	"769"	"40"	"35.000"	"28.000"	"0.0037316108240589"	"19"	"0"	"2.263E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWALDIAELR"	"[R].aWALDIAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"693.90076"	"1386.79424"	"1386.79427"	"-0.02"	"-0.00001"	"8/78"	"8"	"78"	"1035199.58197021"	"HCD"	"MS2"	"0"	"55.8"	"100.000"	"67.4275"	"21927"	"21927"	"21905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.0"	""	"80.5"	""	"71.3"	""	"80.6"	""	"88.8"	"134.2"	""	"779"	"21"	"35.000"	"28.000"	"0.321741781360311"	"18"	"0.0001889"	"0.0005963"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPAGPILSIR"	"[K].fSPAGPILSIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.91888"	"1386.83049"	"1386.83065"	"-0.12"	"-0.00008"	"9/94"	"9"	"94"	"4410920.60955811"	"HCD"	"MS2"	"21.48195"	"246.0"	"100.000"	"56.6617"	"17594"	"17594"	"17573"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"299.7"	""	"284.5"	""	"333.7"	""	"386.6"	""	"480.5"	"553.8"	""	"695"	"22"	"35.000"	"28.000"	"0.231182421780105"	"14"	"0.0006037"	"0.004159"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPAGPILSIR"	"[K].fSPAGPILSIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.91949"	"1386.83171"	"1386.83065"	"0.77"	"0.00053"	"9/94"	"9"	"94"	"4195187.48406982"	"HCD"	"MS2"	"16.76525"	"233.5"	"100.000"	"56.4543"	"17455"	"17455"	"17435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.6"	""	"292.1"	""	"308.1"	""	"334.6"	""	"443.8"	"534.5"	""	"689"	"21"	"35.000"	"28.000"	"0.293892989279059"	"14"	"0.000494"	"0.002707"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPANIGVTK"	"[K].ePANIGVTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"693.92108"	"1386.83489"	"1386.83569"	"-0.58"	"-0.00040"	"14/88"	"14"	"88"	"1530227.94403076"	"HCD"	"MS2"	"0"	"105.8"	"100.000"	"34.4737"	"8553"	"8553"	"8522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.1"	""	"139.7"	""	"152.8"	""	"177.7"	"0.9"	"181.2"	"205.6"	""	"629"	"48"	"34.000"	"27.000"	"0.000492743211549014"	"25"	"0"	"0.0001026"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPANIGVTK"	"[K].ePANIGVTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"693.92120"	"1386.83513"	"1386.83569"	"-0.40"	"-0.00028"	"14/88"	"14"	"88"	"1280198.92803955"	"HCD"	"MS2"	"0"	"96.4"	"100.000"	"34.4419"	"8497"	"8497"	"8467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.0"	""	"127.7"	""	"143.7"	""	"168.4"	"1.9"	"158.1"	"194.0"	""	"629"	"50"	"34.000"	"27.000"	"0.000289481390316373"	"26"	"0"	"9.084E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHSFPTLK"	"[K].vHSFPTLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"462.95462"	"1386.84931"	"1386.85094"	"-1.18"	"-0.00054"	"6/62"	"6"	"62"	"88670908.5773926"	"HCD"	"MS2"	"6.256784"	"496.2"	"21.558"	"36.1091"	"9180"	"9180"	"9162"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"663.9"	""	"669.0"	""	"709.0"	""	"829.3"	""	"889.2"	"944.1"	""	"558"	"40"	"34.000"	"27.000"	"0.00270149521896888"	"22"	"0.0001889"	"0.0004689"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPNGTLK"	"[RK].wLPNGTLk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"693.92865"	"1386.85002"	"1386.85094"	"-0.66"	"-0.00046"	"5/64"	"5"	"64"	"4240771.05535889"	"HCD"	"MS2"	"21.59743"	"332.4"	"100.000"	"49.3926"	"14599"	"14599"	"14575"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"509.4"	""	"438.4"	""	"478.6"	""	"553.9"	"4.5"	"571.2"	"590.5"	""	"547"	"31"	"34.000"	"27.000"	"0.0233860745973961"	""	"0.0009727"	"0.0107"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPNGTLK"	"[RK].wLPNGTLk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"693.92883"	"1386.85039"	"1386.85094"	"-0.40"	"-0.00028"	"5/64"	"5"	"64"	"4207067.75115967"	"HCD"	"MS2"	"24.5413"	"315.2"	"100.000"	"49.6316"	"14740"	"14740"	"14718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"489.2"	""	"419.8"	""	"483.7"	""	"486.8"	"10.0"	"546.4"	"546.7"	""	"547"	"33"	"34.000"	"27.000"	"0.0135193972890899"	""	"0.0008731"	"0.008539"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHSFPTLK"	"[K].vHSFPTLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.8085"	"0.0000"	"1"	"1"	"1"	"462.95526"	"1386.85123"	"1386.85094"	"0.21"	"0.00010"	"6/62"	"6"	"62"	"88381142.7502441"	"HCD"	"MS2"	"4.742023"	"562.5"	"25.280"	"36.1981"	"9260"	"9260"	"9241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"788.7"	""	"785.4"	""	"823.0"	""	"952.4"	""	"957.8"	"1027.6"	""	"554"	"47"	"34.000"	"27.000"	"0.000603225606941826"	"24"	"0.0001889"	"0.0009237"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFTIPDHSR"	"[K].wFTIPDHSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.7843"	"0.0000"	"1"	"1"	"1"	"463.24817"	"1387.72995"	"1387.73200"	"-1.47"	"-0.00068"	"8/74"	"8"	"74"	"17028222.9077148"	"HCD"	"MS2"	"0"	"147.4"	"59.025"	"42.4928"	"11792"	"11792"	"11772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.1"	""	"186.0"	""	"212.1"	""	"243.3"	"1.4"	"270.1"	"298.8"	""	"673"	"51"	"35.000"	"28.000"	"0.000257623258225638"	"27"	"0.0001308"	"0.0002796"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFTIPDHSR"	"[K].wFTIPDHSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.7708"	"0.0000"	"1"	"1"	"1"	"463.24838"	"1387.73059"	"1387.73200"	"-1.01"	"-0.00047"	"8/74"	"8"	"74"	"16820724.3046875"	"HCD"	"MS2"	"3.258372"	"128.8"	"53.891"	"42.7539"	"11943"	"11943"	"11923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.2"	""	"167.4"	""	"173.8"	""	"226.8"	""	"229.4"	"254.6"	""	"681"	"48"	"35.000"	"28.000"	"0.000531027627212578"	"27"	"0.0001859"	"0.0003218"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPVFEK"	"[R].yFPVFEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"463.27194"	"1387.80127"	"1387.80260"	"-0.95"	"-0.00044"	"5/48"	"5"	"48"	"4112182.55426025"	"HCD"	"MS2"	"30.59835"	"145.5"	"100.000"	"58.5428"	"18363"	"18363"	"18341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.8"	""	"189.2"	""	"200.0"	""	"261.6"	""	"265.8"	"265.5"	""	"882"	"11"	"36.000"	"29.000"	"3.90335983935398"	"15"	"0.0009404"	"0.01007"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPVFEK"	"[R].yFPVFEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"463.27203"	"1387.80155"	"1387.80260"	"-0.75"	"-0.00035"	"7/48"	"7"	"48"	"3270891.09082031"	"HCD"	"MS2"	"21.42407"	"119.2"	"100.000"	"58.3440"	"18228"	"18228"	"18203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.5"	""	"155.7"	""	"161.8"	""	"214.4"	""	"203.1"	"221.7"	""	"890"	"14"	"36.000"	"29.000"	"1.69965200523821"	"17"	"0.001966"	"0.02907"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPVFEK"	"[R].yFPVFEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"694.40442"	"1387.80156"	"1387.80260"	"-0.74"	"-0.00052"	"8/48"	"8"	"48"	"13676603.9263306"	"HCD"	"MS2"	"0"	"935.2"	"100.000"	"58.4187"	"18312"	"18312"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1437.9"	""	"1236.8"	""	"1315.2"	""	"1602.0"	"2.8"	"1556.0"	"1699.1"	""	"890"	"29"	"36.000"	"29.000"	"0.0546210457865491"	"21"	"0.0006037"	"0.004968"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPVFEK"	"[R].yFPVFEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"694.40454"	"1387.80181"	"1387.80260"	"-0.57"	"-0.00039"	"8/48"	"8"	"48"	"30902653.2177734"	"HCD"	"MS2"	"3.900891"	"525.8"	"23.406"	"58.5184"	"18299"	"18299"	"18281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"688.8"	""	"688.3"	""	"730.5"	""	"863.0"	""	"929.4"	"1084.1"	""	"890"	"29"	"36.000"	"29.000"	"0.055508566383811"	"20"	"0.00119"	"0.01615"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPVFEK"	"[R].yFPVFEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"694.40472"	"1387.80217"	"1387.80260"	"-0.31"	"-0.00021"	"8/48"	"8"	"48"	"15539264.8831787"	"HCD"	"MS2"	"6.732757"	"453.3"	"41.958"	"58.7387"	"18439"	"18439"	"18421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"632.1"	""	"578.3"	""	"661.7"	""	"714.6"	"0.5"	"794.7"	"912.4"	""	"809"	"29"	"36.000"	"29.000"	"0.050224835842113"	"20"	"0.0007444"	"0.007211"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPVFEK"	"[R].yFPVFEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"694.40479"	"1387.80229"	"1387.80260"	"-0.22"	"-0.00015"	"8/48"	"8"	"48"	"9056452.21679688"	"HCD"	"MS2"	"15.17998"	"657.5"	"100.000"	"58.2271"	"18180"	"18180"	"18155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"985.4"	""	"887.6"	""	"910.7"	""	"1130.0"	"0.1"	"1110.9"	"1198.5"	""	"811"	"29"	"36.000"	"29.000"	"0.0515217799662064"	"20"	"0.0006037"	"0.005028"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLDVAGLK"	"[K].vDLDVAGLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"463.28900"	"1387.85245"	"1387.85609"	"-2.62"	"-0.00121"	"6/68"	"6"	"68"	"3258156.04779053"	"HCD"	"MS2"	"31.8715"	"121.5"	"100.000"	"54.1554"	"16569"	"16569"	"16555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.2"	""	"147.4"	""	"151.3"	""	"212.7"	""	"246.1"	"256.8"	""	"607"	"33"	"34.000"	"27.000"	"0.0169886432053766"	"19"	"0.0001889"	"0.0005298"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLDVAGLK"	"[K].vDLDVAGLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"694.43085"	"1387.85442"	"1387.85609"	"-1.20"	"-0.00083"	"8/68"	"8"	"68"	"2806770.06243896"	"HCD"	"MS2"	"0"	"217.2"	"100.000"	"53.9974"	"16506"	"16506"	"16490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.9"	""	"269.8"	""	"261.5"	""	"366.6"	"2.7"	"434.7"	"459.1"	""	"576"	"58"	"34.000"	"27.000"	"5.02796780041105E-05"	"25"	"0"	"9.124E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLDVAGLK"	"[K].vDLDVAGLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"694.43109"	"1387.85491"	"1387.85609"	"-0.85"	"-0.00059"	"8/68"	"8"	"68"	"2153145.20928955"	"HCD"	"MS2"	"28.17725"	"180.4"	"100.000"	"53.7728"	"16362"	"16362"	"16351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"227.1"	""	"223.3"	""	"224.7"	""	"296.3"	"1.4"	"364.0"	"376.1"	""	"590"	"57"	"34.000"	"27.000"	"5.51851231407911E-05"	"25"	"0"	"8.728E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLDVAGLK"	"[K].vDLDVAGLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"463.28992"	"1387.85520"	"1387.85609"	"-0.64"	"-0.00030"	"6/68"	"6"	"68"	"3162574.07958984"	"HCD"	"MS2"	"33.25893"	"125.8"	"100.000"	"54.0064"	"16455"	"16455"	"16434"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"138.4"	""	"152.6"	""	"147.3"	""	"222.5"	"1.8"	"256.6"	"276.5"	""	"590"	"32"	"34.000"	"27.000"	"0.0166656407569629"	"19"	"0.0001889"	"0.0004484"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIVSIGDPK"	"[R].tIVSIGDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"694.43127"	"1387.85527"	"1387.85609"	"-0.59"	"-0.00041"	"7/76"	"7"	"76"	"2388846.48577881"	"HCD"	"MS2"	"19.61569"	"176.3"	"100.000"	"40.9559"	"11166"	"11166"	"11141"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"258.8"	""	"234.2"	""	"261.9"	""	"284.7"	"2.0"	"312.1"	"315.8"	""	"590"	"42"	"34.000"	"27.000"	"0.00174109318650694"	"25"	"0.0001308"	"0.0002974"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLDVAGLK"	"[K].vDLDVAGLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"694.43134"	"1387.85539"	"1387.85609"	"-0.50"	"-0.00035"	"8/68"	"8"	"68"	"6549812.09936523"	"HCD"	"MS2"	"2.659068"	"467.0"	"100.000"	"54.0660"	"16479"	"16479"	"16461"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"518.4"	""	"543.1"	""	"549.3"	""	"812.0"	""	"962.1"	"1055.5"	""	"590"	"58"	"34.000"	"27.000"	"4.53755618889395E-05"	"25"	"0"	"0.0001608"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLDVAGLK"	"[K].vDLDVAGLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"694.43158"	"1387.85588"	"1387.85609"	"-0.15"	"-0.00010"	"8/68"	"8"	"68"	"5977085.56085205"	"HCD"	"MS2"	"0"	"423.6"	"100.000"	"54.2885"	"16623"	"16623"	"16605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"488.1"	""	"489.6"	""	"498.8"	""	"732.3"	""	"865.1"	"953.2"	""	"601"	"56"	"34.000"	"27.000"	"7.35943504174346E-05"	"24"	"0"	"0.0001309"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLINELVK"	"[R].tLINELVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"694.43878"	"1387.87029"	"1387.89247"	"-15.99"	"-0.01109"	"12/72"	"12"	"72"	"8564716.99645996"	"HCD"	"MS2"	"12.00952"	"550.3"	"100.000"	"52.9471"	"16043"	"16043"	"16018"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"627.1"	""	"723.1"	""	"761.9"	""	"991.6"	"2.5"	"1067.8"	"1045.7"	""	"501"	"21"	"33.000"	"26.000"	"0.197609459463448"	""	"0.001286"	"0.01883"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWGVIDVK"	"[K].lWGVIDVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"0"	"2"	"2"	"0.4524"	"0.0000"	"1"	"1"	"1"	"694.43896"	"1387.87065"	"1387.87134"	"-0.50"	"-0.00035"	"7/56"	"7"	"56"	"2735885.74926758"	"HCD"	"MS2"	"39.4383"	"194.6"	"100.000"	"65.2878"	"21112"	"21112"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"319.1"	""	"282.4"	""	"282.7"	""	"304.1"	"2.1"	"317.0"	"332.4"	""	"501"	"42"	"33.000"	"26.000"	"0.00142826150206327"	""	"0.0001859"	"0.0003634"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWGVIDVK"	"[K].lWGVIDVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"0"	"2"	"2"	"0.4524"	"0.0000"	"1"	"1"	"1"	"694.44000"	"1387.87273"	"1387.87134"	"1.00"	"0.00069"	"7/56"	"7"	"56"	"2519680.25756836"	"HCD"	"MS2"	"42.01939"	"177.4"	"100.000"	"65.3188"	"21072"	"21072"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.0"	""	"269.1"	""	"277.3"	""	"272.9"	"1.6"	"292.9"	"287.1"	""	"497"	"42"	"33.000"	"26.000"	"0.00141359953314695"	""	"0.0001859"	"0.0003731"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLINELVK"	"[R].tLINELVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"694.44934"	"1387.89141"	"1387.89247"	"-0.77"	"-0.00053"	"6/72"	"6"	"72"	"8743740.52404785"	"HCD"	"MS2"	"0"	"632.3"	"100.000"	"53.0730"	"16093"	"16093"	"16087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"839.8"	""	"805.4"	""	"863.6"	""	"1055.9"	"0.9"	"1190.0"	"1239.3"	""	"395"	"43"	"32.000"	"25.000"	"0.000958444787820188"	""	"0.0002277"	"0.001191"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLINELVK"	"[R].tLINELVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"694.45221"	"1387.89714"	"1387.89247"	"3.36"	"0.00233"	"6/72"	"6"	"72"	"9200106.33148193"	"HCD"	"MS2"	"100"	"574.4"	"91.830"	"53.1822"	"16189"	"16189"	"16166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"715.5"	""	"738.1"	""	"779.4"	""	"990.6"	""	"1139.3"	"1099.5"	""	"333"	"25"	"32.000"	"25.000"	"0.0503981085778867"	""	"0.0004166"	"0.00222"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPNVVK"	"[K].fIIPNVVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"463.30664"	"1387.90537"	"1387.90773"	"-1.70"	"-0.00079"	"9/64"	"9"	"64"	"9255026.37811279"	"HCD"	"MS2"	"12.98827"	"281.5"	"100.000"	"61.6598"	"19631"	"19631"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"497.5"	"2.8"	"429.1"	""	"454.8"	""	"438.0"	""	"387.3"	"449.7"	""	"289"	"31"	"31.000"	"24.000"	"0.0113990286995881"	"21"	"0.000523"	"0.002919"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPNVVK"	"[K].fIIPNVVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"463.30673"	"1387.90564"	"1387.90773"	"-1.50"	"-0.00070"	"10/64"	"10"	"64"	"6010589.47485352"	"HCD"	"MS2"	"6.165365"	"183.2"	"100.000"	"61.9620"	"19754"	"19754"	"19731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.9"	""	"258.5"	""	"292.1"	""	"265.6"	""	"285.3"	"337.0"	""	"289"	"34"	"31.000"	"24.000"	"0.00591381653309865"	"21"	"0.0004557"	"0.002593"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPNVVK"	"[K].fIIPNVVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"694.45679"	"1387.90630"	"1387.90773"	"-1.03"	"-0.00072"	"12/64"	"12"	"64"	"22615513.8170776"	"HCD"	"MS2"	"3.758169"	"829.2"	"71.609"	"61.6322"	"19620"	"19620"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1479.1"	""	"1309.7"	""	"1323.9"	""	"1258.1"	"3.5"	"1143.5"	"1306.6"	""	"196"	"37"	"29.000"	"22.000"	"0.00192409307129933"	""	"0.0006037"	"0.004278"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPNVVK"	"[K].fIIPNVVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"694.45691"	"1387.90654"	"1387.90773"	"-0.86"	"-0.00059"	"12/64"	"12"	"64"	"34539910.5878906"	"HCD"	"MS2"	"0.4868262"	"336.2"	"18.268"	"61.9459"	"19748"	"19748"	"19731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"574.7"	""	"484.0"	""	"543.6"	""	"488.7"	""	"485.8"	"601.3"	""	"196"	"37"	"29.000"	"22.000"	"0.00191966778003587"	""	"0.0006037"	"0.00524"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPNVVK"	"[K].fIIPNVVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"694.45734"	"1387.90740"	"1387.90773"	"-0.24"	"-0.00017"	"12/64"	"12"	"64"	"16970028.5041504"	"HCD"	"MS2"	"6.493885"	"928.9"	"100.000"	"61.4642"	"19498"	"19498"	"19481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1684.8"	""	"1436.0"	""	"1453.3"	""	"1425.9"	"7.5"	"1316.0"	"1443.1"	""	"196"	"37"	"29.000"	"22.000"	"0.00197799903640793"	""	"0.0004166"	"0.002138"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPNVVK"	"[K].fIIPNVVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"463.30759"	"1387.90821"	"1387.90773"	"0.34"	"0.00016"	"10/64"	"10"	"64"	"4470257.73950195"	"HCD"	"MS2"	"9.048641"	"148.0"	"100.000"	"61.8655"	"19661"	"19661"	"19641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.4"	""	"193.8"	""	"236.3"	""	"231.8"	""	"254.0"	"271.9"	""	"196"	"21"	"29.000"	"22.000"	"0.083796537862699"	"18"	"0.0006037"	"0.006017"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPNVVK"	"[K].fIIPNVVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"463.30759"	"1387.90821"	"1387.90773"	"0.34"	"0.00016"	"9/64"	"9"	"64"	"9934335.07434082"	"HCD"	"MS2"	"6.81696"	"308.7"	"100.000"	"61.5172"	"19519"	"19519"	"19497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"541.5"	""	"451.9"	""	"501.5"	""	"473.6"	""	"435.3"	"510.3"	""	"196"	"28"	"29.000"	"22.000"	"0.0142634989897033"	"20"	"0.0006037"	"0.004467"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPNVVK"	"[K].fIIPNVVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"694.45813"	"1387.90898"	"1387.90773"	"0.90"	"0.00063"	"12/64"	"12"	"64"	"39656551.7177734"	"HCD"	"MS2"	"0.3188221"	"373.1"	"17.661"	"61.7777"	"19626"	"19626"	"19609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"628.9"	""	"540.8"	""	"628.7"	""	"496.2"	""	"576.2"	"656.5"	""	"196"	"39"	"29.000"	"22.000"	"0.00125958092674474"	""	"0.0006037"	"0.004166"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"694.89667"	"1388.78606"	"1388.79216"	"-4.39"	"-0.00305"	"7/86"	"7"	"86"	"1384981.52282715"	"HCD"	"MS2"	"17.74661"	"100.0"	"100.000"	"51.3135"	"15375"	"15375"	"15346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.9"	""	"127.5"	""	"132.3"	""	"167.0"	""	"186.4"	"194.9"	""	"888"	"19"	"36.000"	"29.000"	"0.530130718382137"	"22"	"0.002772"	"0.04499"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"694.89679"	"1388.78630"	"1388.79216"	"-4.22"	"-0.00293"	"7/86"	"7"	"86"	"4213238.98071289"	"HCD"	"MS2"	"10.56743"	"280.3"	"100.000"	"52.9110"	"16078"	"16078"	"16054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"420.5"	""	"353.2"	"3.5"	"403.7"	""	"432.4"	""	"529.0"	"516.5"	""	"893"	"8"	"36.000"	"29.000"	"6.82058245003299"	"15"	"0.00803"	"0.331"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"694.89838"	"1388.78948"	"1388.79216"	"-1.93"	"-0.00134"	"10/86"	"10"	"86"	"2157860.41247559"	"HCD"	"MS2"	"32.73183"	"156.2"	"100.000"	"51.6352"	"15557"	"15557"	"15526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"189.9"	""	"176.5"	""	"200.1"	""	"254.4"	"0.2"	"325.4"	"337.3"	""	"925"	"10"	"36.000"	"29.000"	"5.1299335205886"	"19"	"0.002711"	"0.04054"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5366"	"0.0000"	"1"	"1"	"1"	"694.89862"	"1388.78996"	"1388.79216"	"-1.58"	"-0.00110"	"7/86"	"7"	"86"	"9137364.17468262"	"HCD"	"MS2"	"22.46409"	"449.2"	"100.000"	"48.8394"	"14420"	"14420"	"14399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"532.2"	""	"530.6"	""	"553.0"	""	"1030.7"	""	"828.0"	"783.2"	""	"925"	"41"	"36.000"	"29.000"	"0.00370776104316801"	""	"0.001454"	"0.01973"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"694.89886"	"1388.79045"	"1388.79216"	"-1.23"	"-0.00085"	"7/86"	"7"	"86"	"10155791.8494873"	"HCD"	"MS2"	"25.50832"	"453.1"	"100.000"	"48.5646"	"14260"	"14260"	"14239"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"521.9"	""	"519.6"	""	"589.1"	""	"1100.1"	""	"795.2"	"767.2"	""	"912"	"41"	"36.000"	"29.000"	"0.00349916839148989"	"27"	"0.0008453"	"0.008084"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"463.60184"	"1388.79096"	"1388.79216"	"-0.86"	"-0.00040"	"10/86"	"10"	"86"	"8637911.60894775"	"HCD"	"MS2"	"57.51127"	"153.2"	"100.000"	"48.6152"	"14281"	"14281"	"14255"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.2"	""	"189.0"	""	"219.3"	""	"310.9"	""	"273.5"	"285.5"	""	"893"	"41"	"36.000"	"29.000"	"0.00387098477526044"	"20"	"0.0001308"	"0.0002932"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"694.89948"	"1388.79167"	"1388.79216"	"-0.35"	"-0.00024"	"7/86"	"7"	"86"	"3339739.0333252"	"HCD"	"MS2"	"53.94223"	"246.8"	"100.000"	"49.2016"	"14521"	"14521"	"14495"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"313.4"	""	"293.1"	""	"317.2"	""	"464.3"	""	"473.4"	"481.3"	""	"893"	"26"	"36.000"	"29.000"	"0.111640420399746"	"25"	"0.001999"	"0.03145"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"694.89954"	"1388.79180"	"1388.79216"	"-0.26"	"-0.00018"	"7/86"	"7"	"86"	"21648746.6033936"	"HCD"	"MS2"	"4.621427"	"308.6"	"40.645"	"48.8658"	"14384"	"14384"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"312.3"	""	"317.8"	""	"363.8"	""	"884.3"	""	"541.2"	"507.7"	""	"891"	"40"	"36.000"	"29.000"	"0.00430375666589962"	""	"0.0005564"	"0.003345"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"694.89966"	"1388.79204"	"1388.79216"	"-0.09"	"-0.00006"	"7/86"	"7"	"86"	"3566889.11950684"	"HCD"	"MS2"	"45.3657"	"250.2"	"100.000"	"49.4903"	"14683"	"14683"	"14654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.1"	""	"283.3"	""	"324.1"	""	"500.3"	""	"491.0"	"471.0"	""	"925"	"25"	"36.000"	"29.000"	"0.158895550903692"	"25"	"0.002424"	"0.0357"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"694.89966"	"1388.79204"	"1388.79216"	"-0.09"	"-0.00006"	"7/86"	"7"	"86"	"21393067.5480957"	"HCD"	"MS2"	"4.237399"	"411.8"	"53.113"	"49.1388"	"14543"	"14543"	"14527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"408.1"	""	"422.5"	""	"461.2"	""	"1242.0"	"1.1"	"700.5"	"666.1"	""	"925"	"42"	"36.000"	"29.000"	"0.00311969212810289"	"27"	"0.0006037"	"0.004409"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"694.89978"	"1388.79228"	"1388.79216"	"0.09"	"0.00006"	"6/86"	"6"	"86"	"3226648.98498535"	"HCD"	"MS2"	"0"	"253.8"	"100.000"	"51.9647"	"15641"	"15641"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"313.9"	""	"294.1"	""	"378.8"	""	"428.6"	""	"517.2"	"475.4"	""	"912"	"5"	"36.000"	"29.000"	"14.6542920561998"	"18"	"0.005975"	"0.2022"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVNMVPFPR"	"[K].lAVNmVPFPR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"463.60233"	"1388.79242"	"1388.79216"	"0.19"	"0.00009"	"10/86"	"10"	"86"	"9828229.53436279"	"HCD"	"MS2"	"51.44904"	"158.8"	"100.000"	"48.9315"	"14458"	"14458"	"14431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.0"	""	"206.4"	""	"206.2"	""	"331.2"	""	"278.1"	"300.9"	""	"911"	"38"	"36.000"	"29.000"	"0.00771770868103758"	"18"	"0.0001308"	"0.0002318"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFENFK"	"[R].vFFENFk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"694.90155"	"1388.79582"	"1388.79784"	"-1.45"	"-0.00101"	"12/52"	"12"	"52"	"7924506.43054199"	"HCD"	"MS2"	"28.38406"	"677.2"	"100.000"	"59.7310"	"18843"	"18843"	"18821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"850.2"	""	"940.3"	""	"829.2"	""	"1231.8"	"0.7"	"1283.0"	"1286.2"	""	"904"	"34"	"36.000"	"29.000"	"0.0170662630298288"	"18"	"0.0006037"	"0.005972"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFENFK"	"[R].vFFENFk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"694.90234"	"1388.79741"	"1388.79784"	"-0.31"	"-0.00022"	"9/52"	"9"	"52"	"3460623.77276611"	"HCD"	"MS2"	"38.64345"	"223.1"	"100.000"	"59.9032"	"18860"	"18860"	"18841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"241.6"	""	"287.3"	""	"268.2"	""	"380.1"	""	"454.9"	"488.8"	""	"842"	"16"	"36.000"	"29.000"	"1.10479600676485"	"20"	"0.0004166"	"0.00246"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFENFK"	"[R].vFFENFk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"463.60413"	"1388.79782"	"1388.79784"	"-0.01"	"-0.00001"	"5/52"	"5"	"52"	"2650041.35900879"	"HCD"	"MS2"	"0"	"98.6"	"100.000"	"59.8642"	"18898"	"18898"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.6"	""	"140.3"	""	"130.7"	""	"178.1"	""	"182.4"	"189.6"	""	"840"	"26"	"36.000"	"29.000"	"0.11674795724589"	"15"	"0.0006037"	"0.00505"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFENFK"	"[R].vFFENFk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"694.90265"	"1388.79802"	"1388.79784"	"0.13"	"0.00009"	"10/52"	"10"	"52"	"4213337.98175049"	"HCD"	"MS2"	"33.63243"	"304.8"	"100.000"	"60.0275"	"18965"	"18965"	"18948"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.7"	""	"389.4"	""	"366.2"	""	"529.9"	""	"616.8"	"651.8"	""	"840"	"21"	"36.000"	"29.000"	"0.298709675734398"	"18"	"0.000523"	"0.003079"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFENFK"	"[R].vFFENFk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"694.90356"	"1388.79985"	"1388.79784"	"1.45"	"0.00100"	"12/52"	"12"	"52"	"8218314.8692627"	"HCD"	"MS2"	"29.89683"	"689.0"	"100.000"	"59.5839"	"18730"	"18730"	"18713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"777.3"	""	"979.5"	""	"827.5"	""	"1293.1"	"3.5"	"1280.8"	"1374.6"	""	"892"	"33"	"36.000"	"29.000"	"0.0247363067979228"	"17"	"0.0006396"	"0.006194"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIATGERPR"	"[R].fLIATGERPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"463.61145"	"1388.81980"	"1388.82115"	"-0.97"	"-0.00045"	"6/80"	"6"	"80"	"4489749.0166626"	"HCD"	"MS2"	"54.25275"	"202.2"	"72.065"	"35.5035"	"8932"	"8932"	"8907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"300.5"	""	"341.6"	""	"317.4"	""	"273.0"	"8.9"	"336.4"	"334.9"	""	"795"	"22"	"35.000"	"29.000"	"0.23623113304969"	"21"	"0.0002277"	"0.001252"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIATGERPR"	"[R].fLIATGERPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"463.61151"	"1388.81998"	"1388.82115"	"-0.84"	"-0.00039"	"6/80"	"6"	"80"	"5251979.41986084"	"HCD"	"MS2"	"57.13267"	"291.1"	"91.432"	"35.5409"	"8990"	"8990"	"8970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.1"	""	"453.4"	""	"468.9"	""	"408.7"	"9.1"	"506.4"	"482.4"	""	"784"	"28"	"35.000"	"28.000"	"0.0629920971181047"	"20"	"0.0001889"	"0.0004969"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVQALLHLR"	"[R].iPVQALLHLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.63620"	"1388.89405"	"1388.89392"	"0.09"	"0.00004"	"9/86"	"9"	"86"	"4128516.55853271"	"HCD"	"MS2"	"5.267725"	"71.1"	"100.000"	"57.3805"	"17888"	"17888"	"17861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.0"	""	"101.9"	""	"113.4"	""	"113.0"	"3.1"	"129.0"	"127.4"	""	"292"	"53"	"31.000"	"24.000"	"7.80463964719578E-05"	"16"	"0"	"2.725E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVQALLHLR"	"[R].iPVQALLHLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.63641"	"1388.89469"	"1388.89392"	"0.55"	"0.00026"	"7/86"	"7"	"86"	"3939229.22607422"	"HCD"	"MS2"	"18.2893"	"63.7"	"100.000"	"57.1768"	"17751"	"17751"	"17723"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.5"	""	"85.0"	""	"94.4"	""	"96.2"	"0.3"	"117.0"	"126.2"	""	"265"	"47"	"31.000"	"24.000"	"0.000273033463508275"	"15"	"0"	"4.532E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWCNDGK"	"[R].yWcNDGk.[T]"	"N-Term(TMT6plex); C3(Methylthio); K7(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.33710"	"1389.66692"	"1389.66955"	"-1.89"	"-0.00132"	"12/54"	"12"	"54"	"5460515.67498779"	"HCD"	"MS2"	"16.88241"	"466.6"	"88.815"	"43.0971"	"12084"	"12084"	"12066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"524.9"	""	"538.5"	""	"496.1"	""	"884.8"	"6.2"	"986.8"	"997.7"	""	"350"	"10"	"32.000"	"25.000"	"1.61078675056805"	"13"	"0.0009727"	"0.0103"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSWILMR"	"[R].eLPSWILmR.[D]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"695.39075"	"1389.77422"	"1389.77617"	"-1.41"	"-0.00098"	"7/70"	"7"	"70"	"4948543.10668945"	"HCD"	"MS2"	"41.08703"	"272.7"	"100.000"	"61.1040"	"19404"	"19404"	"19379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"359.9"	""	"366.8"	""	"388.0"	""	"532.7"	""	"458.1"	"476.0"	""	"869"	"16"	"36.000"	"29.000"	"1.10151338995134"	"18"	"0.008737"	"0.3889"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESILELITSR"	"[K].eSILELITSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"695.41034"	"1389.81340"	"1389.81506"	"-1.19"	"-0.00083"	"6/88"	"6"	"88"	"7427962.61987305"	"HCD"	"MS2"	"24.57332"	"355.7"	"100.000"	"71.0767"	"23414"	"23414"	"23395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"347.0"	""	"376.9"	""	"387.3"	""	"646.5"	"6.8"	"829.8"	"791.7"	""	"862"	"45"	"36.000"	"29.000"	"0.00144702911738713"	""	"0"	"0.0001056"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESILELITSR"	"[K].eSILELITSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6458"	"0.0000"	"1"	"1"	"1"	"695.41077"	"1389.81426"	"1389.81506"	"-0.58"	"-0.00040"	"6/88"	"6"	"88"	"7303550.29406738"	"HCD"	"MS2"	"10.9049"	"295.3"	"100.000"	"71.0087"	"23438"	"23438"	"23418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.3"	""	"308.9"	""	"334.3"	""	"549.7"	"0.1"	"671.5"	"659.3"	""	"884"	"48"	"36.000"	"29.000"	"0.000686155058401472"	""	"0"	"0.0001297"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVISLAEPR"	"[K].iYVISLAEPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"695.41815"	"1389.82903"	"1389.83032"	"-0.93"	"-0.00065"	"8/78"	"8"	"78"	"3786048.38427734"	"HCD"	"MS2"	"3.855295"	"162.4"	"100.000"	"57.7873"	"18000"	"18000"	"17979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"253.4"	""	"243.2"	""	"258.9"	""	"214.7"	""	"273.4"	"294.8"	""	"896"	"54"	"36.000"	"29.000"	"0.000198279590818457"	"23"	"0"	"5.76E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVISLAEPR"	"[K].iYVISLAEPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"695.41870"	"1389.83013"	"1389.83032"	"-0.14"	"-0.00010"	"8/78"	"8"	"78"	"3794682.87091064"	"HCD"	"MS2"	"9.843209"	"164.9"	"100.000"	"57.9565"	"18123"	"18123"	"18101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.6"	""	"238.0"	""	"246.8"	""	"240.0"	"1.5"	"289.4"	"298.9"	""	"934"	"53"	"36.000"	"29.000"	"0.000212969239749256"	"24"	"0"	"4.239E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVWLPAMK"	"[K].aVWLPAmk.[A]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.41925"	"1389.83122"	"1389.83285"	"-1.17"	"-0.00081"	"5/58"	"5"	"58"	"6564128.22094727"	"HCD"	"MS2"	"23.77229"	"358.1"	"100.000"	"47.5372"	"13888"	"13888"	"13858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"495.0"	""	"486.4"	""	"493.7"	""	"669.3"	"4.7"	"643.8"	"597.5"	""	"933"	"31"	"36.000"	"29.000"	"0.0354692208192595"	"14"	"0.0002277"	"0.001173"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVWLPAMK"	"[K].aVWLPAmk.[A]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.42035"	"1389.83342"	"1389.83285"	"0.41"	"0.00029"	"5/58"	"5"	"58"	"6904477.84594727"	"HCD"	"MS2"	"12.73809"	"398.9"	"100.000"	"47.3015"	"13743"	"13743"	"13720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"519.6"	""	"530.4"	""	"570.6"	""	"725.0"	"7.5"	"730.3"	"695.8"	""	"892"	"31"	"36.000"	"29.000"	"0.0346206214016396"	"14"	"0.0002277"	"0.001172"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVPVGGFK"	"[K].vEVPVGGFk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"695.42944"	"1389.85161"	"1389.85061"	"0.72"	"0.00050"	"5/64"	"5"	"64"	"4265545.84387207"	"HCD"	"MS2"	"46.78867"	"297.4"	"100.000"	"47.7559"	"13977"	"13977"	"13954"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"387.9"	""	"408.0"	""	"424.7"	""	"461.5"	""	"547.6"	"589.8"	""	"764"	"26"	"35.000"	"28.000"	"0.0869087218554932"	"26"	"0.0001308"	"0.0003057"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVPVGGFK"	"[K].vEVPVGGFk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"695.43176"	"1389.85625"	"1389.85061"	"4.06"	"0.00282"	"5/64"	"5"	"64"	"3291309.42272949"	"HCD"	"MS2"	"0"	"263.2"	"100.000"	"47.5406"	"13841"	"13841"	"13816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.4"	""	"340.1"	""	"363.3"	""	"442.3"	"4.6"	"490.8"	"509.6"	""	"706"	"29"	"35.000"	"28.000"	"0.0473996031281666"	"25"	"0.0001889"	"0.0005196"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KELALTEK"	"[K].kELALTEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20717"	"Protein-arginine deiminase type-2 OS=Rattus norvegicus OX=10116 GN=Padi2 PE=1 SV=1"	"P20717"	"Protein-arginine deiminase type-2 OS=Rattus norvegicus OX=10116 GN=Padi2 PE=1 SV=1"	"1"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"3"	"695.43793"	"1389.86858"	"1389.87174"	"-2.27"	"-0.00158"	"6/80"	"6"	"80"	"4809895.12664795"	"HCD"	"MS2"	"30.53626"	"401.2"	"100.000"	"43.6261"	"12295"	"12295"	"12273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"556.2"	""	"514.4"	""	"513.8"	""	"689.5"	"7.4"	"766.9"	"755.5"	""	"592"	"7"	"34.000"	"27.000"	"6.15590219382694"	"19"	"0.006596"	"0.2407"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KELALTEK"	"[K].kELALTEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20717"	"Protein-arginine deiminase type-2 OS=Rattus norvegicus OX=10116 GN=Padi2 PE=1 SV=1"	"P20717"	"Protein-arginine deiminase type-2 OS=Rattus norvegicus OX=10116 GN=Padi2 PE=1 SV=1"	"1"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"695.43811"	"1389.86894"	"1389.87174"	"-2.01"	"-0.00140"	"7/80"	"7"	"80"	"5390180.78088379"	"HCD"	"MS2"	"23.28938"	"433.9"	"95.789"	"43.3622"	"12139"	"12139"	"12117"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"540.6"	""	"531.0"	""	"533.0"	""	"799.4"	""	"892.4"	"826.0"	""	"592"	"4"	"34.000"	"27.000"	"12.198086565281"	"16"	"0.005323"	"0.1641"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNILMLK"	"[K].vTNILMLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q66H20"	"Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ptbp2 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"695.44873"	"1389.89018"	"1389.89036"	"-0.13"	"-0.00009"	"14/66"	"14"	"66"	"8162490.00732422"	"HCD"	"MS2"	"22.54031"	"552.9"	"100.000"	"63.2039"	"20261"	"20261"	"20243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"809.2"	""	"650.0"	""	"683.6"	""	"847.8"	"5.1"	"1130.1"	"1120.9"	""	"287"	"46"	"31.000"	"24.000"	"0.000403507769162248"	""	"0.0001889"	"0.00107"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNLLMLK"	"[K].vTNLLMLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"695.44873"	"1389.89018"	"1389.89036"	"-0.13"	"-0.00009"	"14/66"	"14"	"66"	"8162490.00732422"	"HCD"	"MS2"	"22.54031"	"552.9"	"100.000"	"63.2039"	"20261"	"20261"	"20243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"809.2"	""	"650.0"	""	"683.6"	""	"847.8"	"5.1"	"1130.1"	"1120.9"	""	"287"	"46"	"31.000"	"24.000"	"0.000403507769162248"	""	"0.0001889"	"0.00107"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNILMLK"	"[K].vTNILMLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q66H20"	"Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ptbp2 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"695.44879"	"1389.89031"	"1389.89036"	"-0.04"	"-0.00003"	"14/66"	"14"	"66"	"8996218.76275635"	"HCD"	"MS2"	"14.9895"	"581.5"	"100.000"	"63.1479"	"20186"	"20186"	"20169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"831.7"	""	"686.9"	""	"704.9"	""	"896.4"	""	"1192.0"	"1208.6"	""	"287"	"48"	"31.000"	"24.000"	"0.000243137474364192"	""	"0.0001889"	"0.000786"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNLLMLK"	"[K].vTNLLMLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"695.44879"	"1389.89031"	"1389.89036"	"-0.04"	"-0.00003"	"14/66"	"14"	"66"	"8996218.76275635"	"HCD"	"MS2"	"14.9895"	"581.5"	"100.000"	"63.1479"	"20186"	"20186"	"20169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"831.7"	""	"686.9"	""	"704.9"	""	"896.4"	""	"1192.0"	"1208.6"	""	"287"	"48"	"31.000"	"24.000"	"0.000243137474364192"	""	"0.0001889"	"0.000786"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNILMLK"	"[K].vTNILMLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q66H20"	"Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ptbp2 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"695.44891"	"1389.89055"	"1389.89036"	"0.13"	"0.00009"	"7/66"	"7"	"66"	"3501945.15338135"	"HCD"	"MS2"	"21.01498"	"190.7"	"100.000"	"63.4615"	"20314"	"20314"	"20297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.1"	""	"247.3"	""	"263.0"	""	"244.5"	"5.9"	"364.1"	"398.9"	""	"279"	"19"	"31.000"	"24.000"	"0.176024941075398"	"19"	"0.0003839"	"0.002067"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNLLMLK"	"[K].vTNLLMLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"695.44891"	"1389.89055"	"1389.89036"	"0.13"	"0.00009"	"7/66"	"7"	"66"	"3501945.15338135"	"HCD"	"MS2"	"21.01498"	"190.7"	"100.000"	"63.4615"	"20314"	"20314"	"20297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.1"	""	"247.3"	""	"263.0"	""	"244.5"	"5.9"	"364.1"	"398.9"	""	"279"	"19"	"31.000"	"24.000"	"0.176024941075398"	"19"	"0.0003839"	"0.002067"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNILMLK"	"[K].vTNILMLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q66H20"	"Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ptbp2 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"695.44897"	"1389.89067"	"1389.89036"	"0.22"	"0.00015"	"7/66"	"7"	"66"	"3918167.16668701"	"HCD"	"MS2"	"12.72105"	"207.9"	"100.000"	"63.5313"	"20395"	"20395"	"20371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.0"	""	"267.0"	""	"282.7"	""	"282.1"	"10.1"	"389.3"	"426.0"	""	"279"	"18"	"31.000"	"24.000"	"0.241865657686702"	"19"	"0.0002277"	"0.001196"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNLLMLK"	"[K].vTNLLMLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"695.44897"	"1389.89067"	"1389.89036"	"0.22"	"0.00015"	"7/66"	"7"	"66"	"3918167.16668701"	"HCD"	"MS2"	"12.72105"	"207.9"	"100.000"	"63.5313"	"20395"	"20395"	"20371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.0"	""	"267.0"	""	"282.7"	""	"282.1"	"10.1"	"389.3"	"426.0"	""	"279"	"18"	"31.000"	"24.000"	"0.241865657686702"	"19"	"0.0002277"	"0.001196"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAILTTMLVSR"	"[K].gAILTTMLVSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"3"	"695.90515"	"1390.80303"	"1390.82894"	"-18.63"	"-0.01296"	"8/90"	"8"	"90"	"3884455.02081299"	"HCD"	"MS2"	"22.70033"	"224.9"	"100.000"	"56.0571"	"17293"	"17293"	"17275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"330.5"	""	"253.4"	""	"292.3"	""	"361.7"	""	"444.3"	"450.6"	""	"997"	"5"	"36.000"	"29.000"	"17.1658440485524"	"14"	"0.004631"	"0.1354"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAILTTMLVSR"	"[K].gAILTTMLVSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.90576"	"1390.80425"	"1390.82894"	"-17.75"	"-0.01235"	"9/90"	"9"	"90"	"4476161.02355957"	"HCD"	"MS2"	"16.99437"	"253.1"	"100.000"	"56.1619"	"17390"	"17390"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"374.8"	""	"304.9"	""	"324.2"	""	"399.3"	""	"491.6"	"505.9"	""	"994"	"15"	"36.000"	"29.000"	"1.56443091210835"	"14"	"0.0001889"	"0.0009392"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLDGSERK"	"[R].aGLDGSERk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B5DFC9"	"Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1"	"B5DFC9"	"Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1"	"1"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"695.90723"	"1390.80718"	"1390.80545"	"1.24"	"0.00086"	"8/72"	"8"	"72"	"2953989.81842041"	"HCD"	"MS2"	"11.81917"	"242.1"	"100.000"	"45.8717"	"13158"	"13158"	"13133"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.2"	""	"268.0"	""	"262.6"	""	"465.9"	""	"526.4"	"506.4"	""	"951"	"12"	"36.000"	"29.000"	"2.73621690203818"	"19"	"0.009798"	"0.4427"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLDGSERK"	"[R].aGLDGSERk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B5DFC9"	"Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1"	"B5DFC9"	"Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1"	"1"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"695.90820"	"1390.80913"	"1390.80545"	"2.65"	"0.00184"	"8/72"	"8"	"72"	"1057804.550354"	"HCD"	"MS2"	"0"	"114.1"	"100.000"	"37.3012"	"9670"	"9670"	"9640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.6"	""	"118.6"	""	"132.1"	""	"219.1"	"3.3"	"240.9"	"237.2"	""	"938"	"14"	"36.000"	"29.000"	"1.75054324006193"	"20"	"0.004631"	"0.1333"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPIMLLK"	"[K].sDPImLLk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"695.92139"	"1390.83550"	"1390.83799"	"-1.80"	"-0.00125"	"7/58"	"7"	"58"	"2263550.33868408"	"HCD"	"MS2"	"0"	"175.9"	"100.000"	"50.0285"	"14902"	"14902"	"14878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.0"	"3.2"	"198.8"	""	"221.9"	""	"400.0"	"5.0"	"311.7"	"322.5"	""	"679"	"29"	"35.000"	"28.000"	"0.0437360722799819"	"25"	"0.0008731"	"0.00852"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPIMLLK"	"[K].sDPImLLk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.92230"	"1390.83733"	"1390.83799"	"-0.48"	"-0.00033"	"7/58"	"7"	"58"	"2467868.90661621"	"HCD"	"MS2"	"100"	"197.9"	"100.000"	"49.7583"	"14745"	"14745"	"14719"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.7"	""	"241.9"	""	"304.9"	""	"407.7"	"2.6"	"345.0"	"338.4"	""	"640"	"7"	"35.000"	"28.000"	"6.59401572246399"	"13"	"0.001846"	"0.02605"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILFNNAIK"	"[R].iLFNNAIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"695.94403"	"1390.88078"	"1390.88224"	"-1.05"	"-0.00073"	"14/66"	"14"	"66"	"3188148.42108154"	"HCD"	"MS2"	"14.43681"	"265.0"	"100.000"	"52.0062"	"15708"	"15708"	"15686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"380.7"	""	"345.8"	""	"390.6"	""	"403.5"	"2.3"	"495.7"	"492.5"	""	"314"	"44"	"31.000"	"24.000"	"0.000623590732667021"	"19"	"0.0001889"	"0.0008884"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILFNNAIK"	"[R].iLFNNAIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"695.94409"	"1390.88091"	"1390.88224"	"-0.96"	"-0.00067"	"14/66"	"14"	"66"	"3456976.74963379"	"HCD"	"MS2"	"14.41444"	"271.0"	"100.000"	"51.7324"	"15546"	"15546"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"389.2"	""	"392.6"	""	"381.8"	""	"452.8"	"1.0"	"476.8"	"471.2"	""	"295"	"44"	"31.000"	"24.000"	"0.000550543982748688"	"19"	"0.0001889"	"0.0008736"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILPFFPK"	"[R].aILPFFPk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"464.29965"	"1390.88440"	"1390.88627"	"-1.34"	"-0.00062"	"6/58"	"6"	"58"	"6950664.52398682"	"HCD"	"MS2"	"6.48617"	"176.1"	"100.000"	"70.6824"	"23253"	"23253"	"23235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.3"	""	"196.8"	""	"197.1"	""	"304.8"	""	"385.5"	"450.4"	""	"292"	"36"	"31.000"	"24.000"	"0.00402117390687372"	"21"	"0.0001889"	"0.0009271"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILPFFPK"	"[R].aILPFFPk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"695.94592"	"1390.88457"	"1390.88627"	"-1.22"	"-0.00085"	"7/58"	"7"	"58"	"7098743.86132813"	"HCD"	"MS2"	"14.57084"	"347.7"	"100.000"	"70.2586"	"23132"	"23132"	"23114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"320.3"	""	"433.8"	""	"398.8"	""	"650.9"	"3.9"	"732.0"	"766.1"	""	"292"	"46"	"31.000"	"24.000"	"0.000343837195448817"	""	"0.0002277"	"0.001127"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILPFFPK"	"[R].aILPFFPk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"464.29974"	"1390.88468"	"1390.88627"	"-1.14"	"-0.00053"	"6/58"	"6"	"58"	"7048841.1932373"	"HCD"	"MS2"	"21.12396"	"182.4"	"100.000"	"70.3120"	"23154"	"23154"	"23130"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.9"	""	"224.7"	""	"192.5"	""	"306.5"	""	"412.9"	"446.9"	""	"292"	"34"	"31.000"	"24.000"	"0.00569315300547753"	"21"	"0.0001889"	"0.0009755"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILPFFPK"	"[R].aILPFFPk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.6579"	"0.0000"	"1"	"1"	"1"	"464.29980"	"1390.88486"	"1390.88627"	"-1.01"	"-0.00047"	"6/58"	"6"	"58"	"6597858.48956299"	"HCD"	"MS2"	"31.67164"	"183.9"	"100.000"	"70.3895"	"23134"	"23134"	"23107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.4"	""	"221.1"	""	"193.7"	""	"322.8"	""	"405.9"	"450.1"	""	"292"	"38"	"31.000"	"24.000"	"0.00224570577484243"	""	"0.0006037"	"0.0038"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILPFFPK"	"[R].aILPFFPk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"464.30005"	"1390.88559"	"1390.88627"	"-0.48"	"-0.00022"	"6/58"	"6"	"58"	"6788723.22930908"	"HCD"	"MS2"	"6.504306"	"176.6"	"100.000"	"70.6118"	"23276"	"23276"	"23258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.8"	""	"202.3"	""	"197.1"	""	"293.0"	""	"390.8"	"461.7"	""	"286"	"39"	"31.000"	"24.000"	"0.00169174942468698"	"22"	"0.0001889"	"0.0004954"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILPFFPK"	"[R].aILPFFPk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"695.94647"	"1390.88567"	"1390.88627"	"-0.43"	"-0.00030"	"7/58"	"7"	"58"	"5899301.74157715"	"HCD"	"MS2"	"20.45247"	"296.4"	"100.000"	"70.3294"	"23109"	"23109"	"23091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"289.5"	""	"367.1"	""	"296.4"	""	"536.4"	"0.7"	"646.2"	"683.9"	""	"286"	"46"	"31.000"	"24.000"	"0.000381360789026572"	""	"0.0001889"	"0.0008767"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILPFFPK"	"[R].aILPFFPk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.6042"	"0.0000"	"1"	"1"	"1"	"695.94696"	"1390.88664"	"1390.88627"	"0.27"	"0.00019"	"7/58"	"7"	"58"	"24799151.6572266"	"HCD"	"MS2"	"2.538872"	"364.1"	"29.358"	"70.6388"	"23236"	"23236"	"23219"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.3"	""	"413.7"	""	"398.9"	""	"626.8"	""	"830.3"	"902.2"	""	"286"	"48"	"31.000"	"24.000"	"0.000211026034258453"	""	"0.0004166"	"0.002377"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILPFFPK"	"[R].aILPFFPk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"695.94751"	"1390.88774"	"1390.88627"	"1.06"	"0.00074"	"7/58"	"7"	"58"	"18106347.1917725"	"HCD"	"MS2"	"2.059705"	"809.8"	"95.402"	"70.5682"	"23259"	"23259"	"23242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"660.7"	""	"920.2"	""	"861.9"	""	"1445.1"	"12.9"	"1850.7"	"1961.7"	""	"288"	"47"	"31.000"	"24.000"	"0.000316491821681015"	""	"0.0004166"	"0.002306"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQNLMSWR"	"[R].dLQNLMSWR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"696.36865"	"1391.73003"	"1391.73029"	"-0.19"	"-0.00013"	"7/88"	"7"	"88"	"2719764.40979004"	"HCD"	"MS2"	"40.45237"	"170.3"	"100.000"	"60.1218"	"19003"	"19003"	"18979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.5"	""	"213.2"	""	"208.2"	""	"266.7"	"6.6"	"363.5"	"360.9"	""	"814"	"24"	"36.000"	"29.000"	"0.162029618415273"	"19"	"0.0001889"	"0.0003759"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQNLMSWR"	"[R].dLQNLMSWR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"696.36914"	"1391.73100"	"1391.73029"	"0.52"	"0.00036"	"6/88"	"6"	"88"	"2603223.21783447"	"HCD"	"MS2"	"35.57535"	"167.2"	"100.000"	"59.9885"	"18895"	"18895"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.8"	""	"211.7"	""	"205.4"	""	"254.6"	"5.3"	"354.4"	"332.9"	""	"843"	"38"	"36.000"	"29.000"	"0.00689918163781821"	"26"	"0"	"0.0001419"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCNPIITK"	"[K].vcNPIITk.[L]"	"N-Term(TMT6plex); C2(Methylthio); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"696.41101"	"1391.81474"	"1391.81549"	"-0.53"	"-0.00037"	"7/66"	"7"	"66"	"5816955.42974854"	"HCD"	"MS2"	"4.374191"	"450.6"	"100.000"	"49.7926"	"14805"	"14805"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"563.3"	""	"568.0"	""	"593.5"	""	"879.7"	""	"850.7"	"819.6"	""	"797"	"43"	"36.000"	"29.000"	"0.00206266322532301"	"23"	"0.0001889"	"0.0007322"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCNPIITK"	"[K].vcNPIITk.[L]"	"N-Term(TMT6plex); C2(Methylthio); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"3"	"696.41138"	"1391.81548"	"1391.81549"	"-0.01"	"0.00000"	"7/66"	"7"	"66"	"5571626.39117432"	"HCD"	"MS2"	"3.134261"	"479.5"	"100.000"	"49.5561"	"14662"	"14662"	"14639"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"641.1"	""	"610.3"	""	"654.9"	""	"861.3"	"8.6"	"914.2"	"854.7"	""	"800"	"27"	"36.000"	"29.000"	"0.0755196539638518"	"19"	"0.0004166"	"0.002316"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANNLSSLSK"	"[K].aNNLSSLSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KM74"	"Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3"	"Q4KM74"	"Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"696.41675"	"1391.82622"	"1391.82585"	"0.27"	"0.00018"	"8/84"	"8"	"84"	"573468.775939941"	"HCD"	"MS2"	"0"	"58.1"	"100.000"	"34.8570"	"8710"	"8710"	"8682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.2"	""	"69.7"	""	"76.0"	""	"99.9"	"4.1"	"110.1"	"113.3"	""	"682"	"30"	"35.000"	"28.000"	"0.0326403178311542"	"24"	"0.0001308"	"0.0002399"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSIASPAK"	"[K].iFSIASPAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q561R9"	"Endoribonuclease LACTB2 OS=Rattus norvegicus OX=10116 GN=Lactb2 PE=2 SV=1"	"Q561R9"	"Endoribonuclease LACTB2 OS=Rattus norvegicus OX=10116 GN=Lactb2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.43573"	"1391.86418"	"1391.86626"	"-1.49"	"-0.00104"	"14/70"	"14"	"70"	"738315.665771484"	"HCD"	"MS2"	"0"	"66.6"	"100.000"	"50.4259"	"15012"	"15012"	"14984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.8"	""	"87.1"	""	"92.5"	""	"108.2"	"0.1"	"133.7"	"125.8"	""	"373"	"20"	"32.000"	"25.000"	"0.186929926901528"	"14"	"0.0002723"	"0.001374"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAELFK"	"[K].vNLAELFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.43585"	"1391.86443"	"1391.86626"	"-1.32"	"-0.00092"	"5/68"	"5"	"68"	"5876882.3704834"	"HCD"	"MS2"	"31.9679"	"381.6"	"100.000"	"69.5965"	"22811"	"22811"	"22794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"448.2"	""	"445.1"	""	"547.8"	""	"686.6"	""	"738.3"	"764.0"	""	"374"	"9"	"32.000"	"25.000"	"2.59323339999043"	"13"	"0.000494"	"0.002702"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAELFK"	"[K].vNLAELFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"696.43616"	"1391.86504"	"1391.86626"	"-0.88"	"-0.00061"	"6/68"	"6"	"68"	"5746136.63000488"	"HCD"	"MS2"	"32.00456"	"327.7"	"100.000"	"69.5895"	"22859"	"22859"	"22842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"435.3"	""	"369.4"	""	"467.6"	""	"552.4"	""	"610.4"	"674.7"	""	"351"	"38"	"32.000"	"25.000"	"0.00285941453728271"	""	"0.0001889"	"0.0006768"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INFDALLK"	"[K].iNFDALLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P55062"	"Bax inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Tmbim6 PE=2 SV=2"	"P55062"	"Bax inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Tmbim6 PE=2 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"696.43628"	"1391.86528"	"1391.86626"	"-0.70"	"-0.00049"	"6/68"	"6"	"68"	"2104085.98931885"	"HCD"	"MS2"	"57.19401"	"141.5"	"100.000"	"68.2543"	"22263"	"22263"	"22234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.2"	""	"151.2"	""	"172.3"	""	"261.4"	""	"299.0"	"288.2"	""	"351"	"27"	"32.000"	"25.000"	"0.0329820101348973"	"22"	"0.0001889"	"0.0008001"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAELFK"	"[K].vNLAELFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"464.62668"	"1391.86548"	"1391.86626"	"-0.56"	"-0.00026"	"7/68"	"7"	"68"	"6774290.72698975"	"HCD"	"MS2"	"24.77552"	"259.9"	"100.000"	"69.4564"	"22805"	"22805"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"430.2"	""	"390.5"	""	"374.7"	""	"282.8"	""	"484.8"	"502.9"	""	"351"	"10"	"32.000"	"25.000"	"1.96009499985488"	"13"	"0.002361"	"0.03458"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAELFK"	"[K].vNLAELFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"464.62683"	"1391.86594"	"1391.86626"	"-0.23"	"-0.00011"	"11/68"	"11"	"68"	"3203193.27087402"	"HCD"	"MS2"	"8.072126"	"124.2"	"100.000"	"69.5480"	"22791"	"22791"	"22762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.5"	""	"146.1"	""	"195.9"	""	"194.1"	"1.5"	"219.0"	"245.0"	""	"366"	"27"	"32.000"	"25.000"	"0.0393052976765887"	"20"	"0.0003839"	"0.001746"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAQLPLIPR"	"[R].aLAAQLPLIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"464.63504"	"1391.89057"	"1391.89359"	"-2.17"	"-0.00101"	"12/94"	"12"	"94"	"1981680.22528076"	"HCD"	"MS2"	"47.97425"	"31.3"	"100.000"	"58.9243"	"18515"	"18515"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.0"	""	"33.9"	""	"42.8"	""	"64.0"	""	"60.2"	"62.3"	""	"213"	"33"	"30.000"	"23.000"	"0.0051327440447076"	"15"	"0.0001308"	"0.0002148"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAQLPLIPR"	"[R].aLAAQLPLIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"464.63568"	"1391.89249"	"1391.89359"	"-0.79"	"-0.00037"	"11/94"	"11"	"94"	"1984518.99438477"	"HCD"	"MS2"	"59.08823"	"31.0"	"100.000"	"58.7438"	"18392"	"18392"	"18361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.9"	""	"41.2"	""	"52.1"	""	"54.2"	""	"53.9"	"59.5"	""	"216"	"34"	"30.000"	"23.000"	"0.00448150366045112"	"15"	"0"	"0.0001126"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAQLPLIPR"	"[R].aLAAQLPLIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.45007"	"1391.89287"	"1391.89359"	"-0.51"	"-0.00036"	"8/94"	"8"	"94"	"4069025.98962402"	"HCD"	"MS2"	"24.40346"	"195.7"	"100.000"	"58.9411"	"18521"	"18521"	"18501"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.9"	""	"270.1"	""	"264.0"	""	"326.8"	""	"336.6"	"365.6"	""	"216"	"45"	"30.000"	"23.000"	"0.000312193427295472"	"15"	"0"	"4.432E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAQLPLIPR"	"[R].aLAAQLPLIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.45026"	"1391.89324"	"1391.89359"	"-0.25"	"-0.00018"	"8/94"	"8"	"94"	"4421510.41833496"	"HCD"	"MS2"	"8.960851"	"194.1"	"100.000"	"58.7094"	"18378"	"18378"	"18361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"291.1"	""	"264.0"	""	"275.0"	""	"324.6"	"2.8"	"338.7"	"341.1"	""	"216"	"40"	"30.000"	"23.000"	"0.00100791464486075"	"15"	"0"	"5.675E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFPDWK"	"[K].eLFPDWk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"696.89972"	"1392.79216"	"1392.79276"	"-0.43"	"-0.00030"	"6/56"	"6"	"56"	"3739119.13775635"	"HCD"	"MS2"	"30.03504"	"299.0"	"100.000"	"59.3160"	"18674"	"18674"	"18645"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"448.1"	""	"401.0"	""	"417.5"	""	"479.0"	""	"531.7"	"555.2"	""	"925"	"31"	"36.000"	"29.000"	"0.0361502859622102"	"26"	"0.0004166"	"0.002476"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFPDWK"	"[K].eLFPDWk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"696.89978"	"1392.79228"	"1392.79276"	"-0.34"	"-0.00024"	"6/56"	"6"	"56"	"3336438.08209229"	"HCD"	"MS2"	"49.68943"	"268.5"	"100.000"	"59.1263"	"18543"	"18543"	"18521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"384.0"	""	"352.6"	""	"373.7"	""	"472.9"	"2.4"	"462.1"	"495.1"	""	"931"	"29"	"36.000"	"29.000"	"0.06010625718671"	"26"	"0.001966"	"0.02868"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVQNFAK"	"[K].eVVQNFAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"696.91602"	"1392.82475"	"1392.82512"	"-0.26"	"-0.00018"	"14/64"	"14"	"64"	"2900264.72698975"	"HCD"	"MS2"	"0"	"239.0"	"100.000"	"37.5296"	"9807"	"9807"	"9777"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"423.7"	""	"306.6"	""	"313.6"	""	"379.8"	""	"427.9"	"414.3"	""	"686"	"48"	"35.000"	"28.000"	"0.0005906009212202"	"24"	"0.0001859"	"0.0003348"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVQNFAK"	"[K].eVVQNFAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"696.91638"	"1392.82549"	"1392.82512"	"0.26"	"0.00018"	"14/64"	"14"	"64"	"2182083.80010986"	"HCD"	"MS2"	"0"	"191.5"	"100.000"	"37.4569"	"9734"	"9734"	"9704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"317.5"	""	"235.4"	""	"249.8"	""	"315.2"	""	"348.4"	"347.5"	""	"662"	"45"	"35.000"	"28.000"	"0.000992722793784914"	"27"	"0.0001889"	"0.0004173"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGFEVLK"	"[K].iEGFEVLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"696.92737"	"1392.84746"	"1392.85027"	"-2.02"	"-0.00141"	"7/62"	"7"	"62"	"4373093.38977051"	"HCD"	"MS2"	"23.62757"	"342.2"	"100.000"	"57.5373"	"17952"	"17952"	"17925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"469.6"	""	"487.7"	""	"489.9"	""	"521.5"	"1.9"	"646.8"	"625.4"	""	"474"	"40"	"33.000"	"26.000"	"0.00250465749683637"	"25"	"0.0001889"	"0.000929"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVGNIFIK"	"[K].sGVGNIFIk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"696.93408"	"1392.86089"	"1392.86151"	"-0.44"	"-0.00031"	"8/72"	"8"	"72"	"13316312.7582397"	"HCD"	"MS2"	"2.571095"	"976.7"	"100.000"	"48.0686"	"14105"	"14105"	"14082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1337.2"	""	"1196.6"	""	"1249.2"	""	"1659.9"	"6.3"	"1815.8"	"1997.3"	""	"358"	"40"	"32.000"	"25.000"	"0.00183591694799002"	""	"0.0001889"	"0.0004682"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVGNIFIK"	"[K].sGVGNIFIk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"696.93414"	"1392.86101"	"1392.86151"	"-0.36"	"-0.00025"	"8/72"	"8"	"72"	"13468349.3955078"	"HCD"	"MS2"	"3.488285"	"916.5"	"93.219"	"47.8051"	"13949"	"13949"	"13928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1247.6"	""	"1170.1"	""	"1160.5"	""	"1551.0"	"0.6"	"1708.4"	"1852.1"	""	"364"	"38"	"32.000"	"25.000"	"0.00268578589056212"	""	"0.0001889"	"0.0005652"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAALVASK"	"[R].qFAALVASk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"464.95886"	"1392.86203"	"1392.86151"	"0.38"	"0.00018"	"7/80"	"7"	"80"	"2990103.64300537"	"HCD"	"MS2"	"36.54817"	"126.9"	"100.000"	"47.2001"	"13702"	"13702"	"13672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.7"	""	"160.1"	""	"181.8"	""	"219.2"	""	"242.9"	"251.4"	""	"360"	"17"	"32.000"	"25.000"	"0.397440851943402"	"15"	"0.0003839"	"0.001728"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAALVASK"	"[R].qFAALVASk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"464.95898"	"1392.86240"	"1392.86151"	"0.64"	"0.00030"	"8/80"	"8"	"80"	"3235548.11932373"	"HCD"	"MS2"	"49.30347"	"127.8"	"100.000"	"47.4613"	"13857"	"13857"	"13826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.4"	""	"150.1"	""	"176.5"	""	"229.8"	""	"251.5"	"251.6"	""	"361"	"19"	"32.000"	"25.000"	"0.213539000808393"	"22"	"0.0009404"	"0.01012"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDYILGLK"	"[K].lDYILGLk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"464.96625"	"1392.88419"	"1392.88666"	"-1.77"	"-0.00082"	"6/56"	"6"	"56"	"2009457.88043213"	"HCD"	"MS2"	"9.275443"	"75.1"	"100.000"	"73.8097"	"24582"	"24582"	"24559"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.0"	""	"100.4"	""	"115.4"	""	"112.8"	""	"151.9"	"141.6"	""	"236"	"37"	"30.000"	"23.000"	"0.00248245855892444"	"15"	"0.0002277"	"0.001246"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDYILGLK"	"[K].lDYILGLk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"464.96664"	"1392.88538"	"1392.88666"	"-0.92"	"-0.00043"	"9/56"	"9"	"56"	"1954563.96624756"	"HCD"	"MS2"	"4.58041"	"73.4"	"100.000"	"73.8259"	"24537"	"24537"	"24513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.5"	""	"90.1"	""	"119.6"	""	"117.9"	""	"130.5"	"149.3"	""	"229"	"29"	"30.000"	"23.000"	"0.0139896061088878"	"15"	"0.0003839"	"0.001547"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIIELYK"	"[R].rIIELYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"464.97031"	"1392.89637"	"1392.89789"	"-1.10"	"-0.00051"	"6/60"	"6"	"60"	"22201857.0294189"	"HCD"	"MS2"	"16.21937"	"545.1"	"48.607"	"38.1762"	"10072"	"10072"	"10049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"994.7"	""	"859.8"	""	"934.2"	""	"713.0"	""	"800.0"	"845.9"	""	"150"	"19"	"28.000"	"21.000"	"0.10070737208534"	"14"	"0.000523"	"0.002863"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIIELYK"	"[R].rIIELYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"464.97049"	"1392.89692"	"1392.89789"	"-0.70"	"-0.00033"	"6/60"	"6"	"60"	"20299419.0759888"	"HCD"	"MS2"	"18.61446"	"687.9"	"70.113"	"38.0693"	"9985"	"9985"	"9959"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1226.0"	""	"1134.1"	""	"1164.0"	""	"910.1"	"1.0"	"986.1"	"1070.3"	""	"150"	"19"	"28.000"	"21.000"	"0.097064688108749"	"14"	"0.0004166"	"0.002468"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLLLCGGEDD"	"[K].aLLLLcGGEDD.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.34772"	"1393.68816"	"1393.69045"	"-1.65"	"-0.00115"	"4/86"	"4"	"86"	"131291.622131348"	"HCD"	"MS2"	"41.46371"	"5.5"	"100.000"	"96.4073"	"33137"	"33137"	"33131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.2"	""	"7.5"	""	"10.2"	""	"6.5"	""	"9.0"	"10.4"	""	"537"	"16"	"34.000"	"27.000"	"0.717702220726099"	"13"	"0.00103"	"0.01245"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLLLCGGEDD"	"[K].aLLLLcGGEDD.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.34772"	"1393.68816"	"1393.69045"	"-1.65"	"-0.00115"	"7/86"	"7"	"86"	"1568622.60443115"	"HCD"	"MS2"	"30.62508"	"25.1"	"100.000"	"96.8332"	"33272"	"33272"	"33267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.8"	""	"39.5"	""	"37.1"	""	"34.2"	""	"42.0"	"49.2"	""	"537"	"55"	"34.000"	"27.000"	"9.39602773471139E-05"	"16"	"0.0002277"	"0.001268"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLLLCGGEDD"	"[K].aLLLLcGGEDD.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.34808"	"1393.68889"	"1393.69045"	"-1.12"	"-0.00078"	"7/86"	"7"	"86"	"241934.512939453"	"HCD"	"MS2"	"34.27968"	"6.9"	"100.000"	"96.9250"	"33297"	"33297"	"33292"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"10.8"	""	"7.8"	""	"10.5"	""	"14.8"	"13.5"	""	"564"	"53"	"34.000"	"27.000"	"0.000133121777636333"	"16"	"0.0001889"	"0.0007557"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLLLCGGEDD"	"[K].aLLLLcGGEDD.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.34827"	"1393.68926"	"1393.69045"	"-0.86"	"-0.00060"	"4/86"	"4"	"86"	"209418.10723877"	"HCD"	"MS2"	"35.48478"	"5.7"	"100.000"	"96.5800"	"33194"	"33194"	"33192"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	"5.1"	""	"9.5"	""	"9.1"	""	"11.9"	"12.1"	""	"574"	"17"	"34.000"	"27.000"	"0.567390286712105"	"14"	"0.0006037"	"0.006166"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLLLCGGEDD"	"[K].aLLLLcGGEDD.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.34845"	"1393.68962"	"1393.69045"	"-0.60"	"-0.00042"	"5/86"	"5"	"86"	"183679.694641113"	"HCD"	"MS2"	"34.29069"	"6.6"	"100.000"	"97.0886"	"33353"	"33353"	"33349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.4"	""	"8.9"	""	"9.3"	""	"11.0"	""	"11.4"	"15.1"	""	"575"	"24"	"34.000"	"27.000"	"0.105108502588773"	"14"	"0.0005564"	"0.003458"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLLLCGGEDD"	"[K].aLLLLcGGEDD.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.34894"	"1393.69060"	"1393.69045"	"0.10"	"0.00007"	"7/86"	"7"	"86"	"1397748.02008057"	"HCD"	"MS2"	"35.2195"	"22.8"	"100.000"	"96.6671"	"33214"	"33214"	"33208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.5"	""	"33.5"	""	"32.2"	""	"38.5"	""	"37.4"	"43.1"	""	"585"	"58"	"34.000"	"27.000"	"5.11830156422712E-05"	"16"	"0.0001889"	"0.0008884"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATFWHYAR"	"[R].lATFWHYAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"465.25681"	"1393.75586"	"1393.75782"	"-1.40"	"-0.00065"	"8/64"	"8"	"64"	"9212336.96624756"	"HCD"	"MS2"	"19.91656"	"149.6"	"86.770"	"46.9050"	"13581"	"13581"	"13560"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.3"	""	"194.8"	""	"219.3"	""	"276.1"	""	"277.9"	"281.3"	""	"888"	"29"	"36.000"	"29.000"	"0.0503944802158508"	"21"	"0.0001889"	"0.0006503"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATFWHYAR"	"[R].lATFWHYAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"465.25735"	"1393.75751"	"1393.75782"	"-0.22"	"-0.00010"	"8/64"	"8"	"64"	"11826594.7502441"	"HCD"	"MS2"	"37.09248"	"203.9"	"100.000"	"47.0539"	"13690"	"13690"	"13666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"236.6"	""	"299.8"	""	"279.4"	""	"344.5"	"3.1"	"383.3"	"387.2"	""	"892"	"29"	"36.000"	"29.000"	"0.054366936112049"	"17"	"0.0001889"	"0.00072"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSQQADLSR"	"[K].iFSQQADLSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"697.38562"	"1393.76396"	"1393.76369"	"0.19"	"0.00013"	"7/96"	"7"	"96"	"1247178.66082764"	"HCD"	"MS2"	"39.70946"	"107.5"	"100.000"	"39.1615"	"10477"	"10477"	"10446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.7"	""	"138.5"	""	"144.0"	""	"184.6"	""	"205.8"	"216.3"	""	"890"	"37"	"36.000"	"29.000"	"0.00838223844822961"	"16"	"0.0001889"	"0.0008094"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEWISAK"	"[K].aMEWISAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"697.39850"	"1393.78972"	"1393.79138"	"-1.19"	"-0.00083"	"7/62"	"7"	"62"	"6132603.61419678"	"HCD"	"MS2"	"11.90134"	"473.4"	"100.000"	"49.5296"	"14699"	"14699"	"14670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"743.0"	""	"678.3"	""	"682.0"	""	"641.9"	"5.7"	"833.1"	"898.0"	""	"851"	"30"	"36.000"	"29.000"	"0.0410109249552"	"24"	"0.0003571"	"0.001513"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEWISAK"	"[K].aMEWISAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"697.39948"	"1393.79167"	"1393.79138"	"0.21"	"0.00015"	"7/62"	"7"	"62"	"8612546.95489502"	"HCD"	"MS2"	"45.69087"	"672.4"	"100.000"	"49.3029"	"14562"	"14562"	"14543"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1057.4"	""	"913.3"	""	"909.6"	""	"948.2"	"4.0"	"1244.1"	"1294.0"	""	"850"	"23"	"36.000"	"29.000"	"0.213495600547015"	"26"	"0.000494"	"0.002716"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAFQISK"	"[R].eLAFQISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"465.28629"	"1393.84430"	"1393.84552"	"-0.87"	"-0.00041"	"8/74"	"8"	"74"	"3295632.47467041"	"HCD"	"MS2"	"23.15396"	"151.6"	"100.000"	"49.4432"	"14620"	"14620"	"14591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.2"	""	"176.9"	""	"192.1"	""	"260.5"	"0.8"	"307.0"	"308.4"	""	"604"	"23"	"34.000"	"27.000"	"0.138358849787789"	"20"	"0.0006037"	"0.005696"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAFQISK"	"[R].eLAFQISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"697.42596"	"1393.84465"	"1393.84552"	"-0.62"	"-0.00044"	"14/74"	"14"	"74"	"10071306.4284668"	"HCD"	"MS2"	"32.46357"	"753.6"	"100.000"	"49.6174"	"14735"	"14735"	"14718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1087.4"	""	"974.3"	""	"992.5"	""	"1175.4"	""	"1432.8"	"1486.1"	""	"604"	"47"	"34.000"	"27.000"	"0.000564946006390472"	""	"0.0001889"	"0.0006299"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAFQISK"	"[R].eLAFQISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"465.28647"	"1393.84485"	"1393.84552"	"-0.48"	"-0.00022"	"8/74"	"8"	"74"	"5288100.53790283"	"HCD"	"MS2"	"28.27542"	"205.3"	"100.000"	"49.6339"	"14741"	"14741"	"14718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"276.5"	""	"245.8"	""	"276.7"	""	"331.5"	""	"419.1"	"398.7"	""	"604"	"24"	"34.000"	"27.000"	"0.118033950529306"	"21"	"0.0003839"	"0.001989"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAFQISK"	"[R].eLAFQISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"697.42639"	"1393.84551"	"1393.84552"	"-0.01"	"-0.00001"	"14/74"	"14"	"74"	"9662657.92352295"	"HCD"	"MS2"	"38.65352"	"783.6"	"100.000"	"49.3397"	"14577"	"14577"	"14559"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1148.2"	""	"1039.9"	""	"1016.2"	""	"1198.8"	""	"1481.5"	"1550.9"	""	"615"	"47"	"34.000"	"27.000"	"0.000599577214425599"	""	"0.0001889"	"0.000711"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLLVLQPPAN"	"[R].sLLLVLQPPAN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"697.43359"	"1393.85991"	"1393.86162"	"-1.22"	"-0.00085"	"6/88"	"6"	"88"	"541901.770446777"	"HCD"	"MS2"	"26.09647"	"14.9"	"100.000"	"80.5147"	"27255"	"27255"	"27233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.7"	""	"18.9"	""	"19.4"	""	"21.3"	""	"39.3"	"29.4"	""	"441"	"46"	"33.000"	"26.000"	"0.000564168188062694"	""	"0.0001889"	"0.0003989"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLLVLQPPAN"	"[R].sLLLVLQPPAN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"697.43372"	"1393.86016"	"1393.86162"	"-1.05"	"-0.00073"	"6/88"	"6"	"88"	"603365.260925293"	"HCD"	"MS2"	"14.24524"	"13.9"	"100.000"	"80.5463"	"27319"	"27319"	"27295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.3"	""	"16.9"	""	"18.7"	""	"21.9"	""	"31.0"	"26.4"	""	"441"	"43"	"33.000"	"26.000"	"0.00101955015218537"	""	"0.0001889"	"0.0006015"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLLVLQPPAN"	"[R].sLLLVLQPPAN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"697.43390"	"1393.86052"	"1393.86162"	"-0.79"	"-0.00055"	"6/88"	"6"	"88"	"593611.61529541"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"80.8123"	"27377"	"27377"	"27360"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.1"	""	"14.8"	""	"20.8"	""	"28.3"	""	"30.7"	"29.7"	""	"441"	"47"	"33.000"	"26.000"	"0.000457518430598808"	""	"0.0001889"	"0.000413"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLLVLQPPAN"	"[R].sLLLVLQPPAN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"697.43420"	"1393.86113"	"1393.86162"	"-0.35"	"-0.00024"	"6/88"	"6"	"88"	"538822.397460938"	"HCD"	"MS2"	"16.26367"	"13.7"	"100.000"	"80.8489"	"27442"	"27442"	"27422"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.5"	""	"12.4"	""	"19.6"	""	"28.9"	"2.0"	"30.8"	"22.6"	""	"441"	"54"	"33.000"	"26.000"	"7.93247284018412E-05"	""	"0.0001889"	"0.0003993"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLLVLQPPAN"	"[R].sLLLVLQPPAN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.43439"	"1393.86150"	"1393.86162"	"-0.09"	"-0.00006"	"7/88"	"7"	"88"	"317356.178466797"	"HCD"	"MS2"	"15.44912"	"15.5"	"100.000"	"81.1907"	"27531"	"27531"	"27504"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.4"	""	"18.6"	""	"21.9"	""	"25.3"	""	"29.2"	"33.3"	""	"441"	"23"	"33.000"	"26.000"	"0.108995506480597"	"14"	"0.0003839"	"0.002045"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITTSLTTK"	"[K].aITTSLTTk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"697.43640"	"1393.86553"	"1393.86665"	"-0.81"	"-0.00056"	"14/74"	"14"	"74"	"5389438.64117432"	"HCD"	"MS2"	"14.91803"	"378.7"	"100.000"	"37.7245"	"9887"	"9887"	"9857"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"529.1"	""	"519.6"	""	"545.7"	""	"610.4"	"3.8"	"700.4"	"677.9"	""	"394"	"54"	"32.000"	"25.000"	"7.18565275443447E-05"	"19"	"7.476E-05"	"0.0002046"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITTSLTTK"	"[K].aITTSLTTk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"697.43677"	"1393.86626"	"1393.86665"	"-0.28"	"-0.00020"	"14/74"	"14"	"74"	"5251698.9541626"	"HCD"	"MS2"	"3.947025"	"383.5"	"100.000"	"37.6404"	"9809"	"9809"	"9784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"524.2"	""	"524.0"	""	"558.3"	""	"623.2"	""	"701.4"	"705.3"	""	"394"	"52"	"32.000"	"25.000"	"0.000117615951457016"	"19"	"0"	"0.0001601"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLITFVNK"	"[K].tLITFVNk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"465.29788"	"1393.87909"	"1393.88191"	"-2.02"	"-0.00094"	"8/64"	"8"	"64"	"4340682.91131592"	"HCD"	"MS2"	"4.876137"	"151.6"	"100.000"	"52.6387"	"15917"	"15917"	"15890"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.1"	""	"178.3"	""	"219.1"	""	"278.6"	""	"291.1"	"292.8"	""	"260"	"19"	"31.000"	"24.000"	"0.150988319799245"	"14"	"0.001846"	"0.02648"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLITFVNK"	"[K].tLITFVNk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"697.44409"	"1393.88091"	"1393.88191"	"-0.72"	"-0.00050"	"7/64"	"7"	"64"	"5010039.81304932"	"HCD"	"MS2"	"52.80528"	"365.5"	"100.000"	"52.5586"	"15884"	"15884"	"15858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"435.9"	""	"463.5"	""	"478.8"	""	"648.6"	""	"649.5"	"793.0"	""	"248"	"41"	"30.000"	"23.000"	"0.00110515116328584"	""	"0.0001889"	"0.0007394"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLITFVNK"	"[K].tLITFVNk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"465.29855"	"1393.88111"	"1393.88191"	"-0.57"	"-0.00027"	"9/64"	"9"	"64"	"5788721.61877441"	"HCD"	"MS2"	"19.27103"	"192.5"	"100.000"	"52.8649"	"16059"	"16059"	"16038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.3"	""	"239.2"	""	"264.5"	""	"333.5"	""	"365.4"	"380.9"	""	"248"	"28"	"30.000"	"23.000"	"0.018768159480609"	"23"	"0.0006037"	"0.003826"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLITFVNK"	"[K].tLITFVNk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"697.44446"	"1393.88164"	"1393.88191"	"-0.19"	"-0.00013"	"14/64"	"14"	"64"	"5123413.86834717"	"HCD"	"MS2"	"42.79456"	"360.5"	"100.000"	"52.7568"	"16015"	"16015"	"15990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"453.0"	""	"449.3"	""	"505.1"	""	"628.2"	"0.2"	"646.4"	"735.9"	""	"268"	"45"	"31.000"	"24.000"	"0.000421798274089576"	""	"0.0001889"	"0.0006153"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LEASELFK"	"[K].lEASELFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.0370"	"0.0000"	"1"	"1"	"1"	"697.91815"	"1394.82903"	"1394.82954"	"-0.37"	"-0.00026"	"7/62"	"7"	"62"	"7728033.94488525"	"HCD"	"MS2"	"44.39832"	"605.7"	"100.000"	"52.8692"	"16011"	"16011"	"15986"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"814.5"	""	"801.4"	""	"834.1"	""	"941.4"	""	"1162.3"	"1193.0"	""	"622"	"27"	"34.000"	"27.000"	"0.0678829002583173"	"26"	"0.0001308"	"0.0003031"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLEAITFK"	"[R].dLEAITFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0370"	"2"	"2"	"2"	"697.91815"	"1394.82903"	"1394.82954"	"-0.37"	"-0.00026"	"6/66"	"6"	"66"	"7728033.94488525"	"HCD"	"MS2"	"44.39832"	"605.7"	"100.000"	"52.8692"	"16011"	"16011"	"15986"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"814.5"	""	"801.4"	""	"834.1"	""	"941.4"	""	"1162.3"	"1193.0"	""	"622"	"26"	"34.000"	"27.000"	"0.0744321200242075"	"26"	"0.0001859"	"0.0003421"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTHHFIK"	"[K].gPTHHFIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"697.91821"	"1394.82915"	"1394.83088"	"-1.24"	"-0.00086"	"12/56"	"12"	"56"	"1906846.47814941"	"HCD"	"MS2"	"0"	"121.7"	"100.000"	"24.9676"	"4686"	"4686"	"4656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"219.6"	""	"259.3"	""	"140.6"	""	"193.4"	""	"181.1"	"160.5"	""	"605"	"34"	"34.000"	"27.000"	"0.013083543388809"	"22"	"0.0001889"	"0.0003923"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTHHFIK"	"[K].gPTHHFIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"465.61465"	"1394.82941"	"1394.83088"	"-1.05"	"-0.00049"	"9/56"	"9"	"56"	"35446541.5897217"	"HCD"	"MS2"	"10.86465"	"1118.7"	"83.314"	"24.9643"	"4719"	"4719"	"4704"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1895.4"	""	"2225.9"	""	"1287.7"	""	"1777.1"	""	"1777.3"	"1606.7"	""	"604"	"22"	"34.000"	"27.000"	"0.207494668884298"	"19"	"0.0001308"	"0.000238"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTHHFIK"	"[K].gPTHHFIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"465.61469"	"1394.82950"	"1394.83088"	"-0.98"	"-0.00046"	"8/56"	"8"	"56"	"2959386.73852539"	"HCD"	"MS2"	"0"	"179.1"	"100.000"	"25.2649"	"4842"	"4842"	"4823"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"294.9"	""	"316.3"	""	"224.0"	""	"274.8"	""	"303.0"	"281.0"	""	"604"	"22"	"34.000"	"27.000"	"0.207494668884298"	"20"	"0.0001889"	"0.001048"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTHHFIK"	"[K].gPTHHFIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"465.61472"	"1394.82959"	"1394.83088"	"-0.92"	"-0.00043"	"10/56"	"10"	"56"	"30685420.1647339"	"HCD"	"MS2"	"23.52014"	"1098.9"	"100.000"	"24.9058"	"4660"	"4660"	"4642"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1884.3"	""	"2171.3"	""	"1276.9"	""	"1818.5"	""	"1672.4"	"1560.3"	""	"604"	"29"	"34.000"	"27.000"	"0.0419765694626433"	"21"	"0.0001308"	"0.0002674"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEAITFK"	"[R].dLEAITFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"697.91870"	"1394.83013"	"1394.82954"	"0.42"	"0.00029"	"6/66"	"6"	"66"	"7271921.26470947"	"HCD"	"MS2"	"40.44403"	"563.7"	"100.000"	"53.0745"	"16145"	"16145"	"16118"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"725.5"	""	"760.1"	""	"787.0"	""	"886.3"	"4.3"	"1075.9"	"1106.7"	""	"604"	"24"	"34.000"	"27.000"	"0.111945577978338"	""	"0.0002277"	"0.001211"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTHHFIK"	"[K].gPTHHFIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"697.91895"	"1394.83061"	"1394.83088"	"-0.19"	"-0.00013"	"12/56"	"12"	"56"	"2149472.74884033"	"HCD"	"MS2"	"0"	"140.0"	"100.000"	"25.0079"	"4737"	"4737"	"4716"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.0"	""	"290.3"	""	"161.9"	""	"227.2"	""	"207.8"	"198.2"	""	"560"	"35"	"34.000"	"27.000"	"0.00798285114901093"	"24"	"0.0001889"	"0.0004396"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPNVFGK"	"[K].emPNVFGk.[E]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.38684"	"1395.76641"	"1395.77064"	"-3.04"	"-0.00212"	"4/64"	"4"	"64"	"1120345.19940186"	"HCD"	"MS2"	"31.00113"	"107.5"	"100.000"	"37.7665"	"9861"	"9861"	"9832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.8"	""	"145.9"	"3.0"	"148.0"	""	"183.6"	""	"203.3"	"213.4"	""	"820"	"10"	"36.000"	"29.000"	"3.76516364558269"	"13"	"0.004409"	"0.1285"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPYYGK"	"[K].yFPYYGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"698.38696"	"1395.76665"	"1395.77130"	"-3.33"	"-0.00232"	"6/50"	"6"	"50"	"7459199.75994873"	"HCD"	"MS2"	"10.03295"	"400.5"	"69.166"	"48.3779"	"14231"	"14231"	"14211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"467.8"	""	"501.7"	""	"495.5"	""	"688.4"	"20.2"	"793.4"	"835.7"	""	"819"	"16"	"36.000"	"29.000"	"0.98685627304716"	"16"	"0.0009727"	"0.01058"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPYYGK"	"[K].yFPYYGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"698.38715"	"1395.76702"	"1395.77130"	"-3.07"	"-0.00214"	"4/50"	"4"	"50"	"4420004.82147217"	"HCD"	"MS2"	"6.359679"	"354.6"	"100.000"	"48.1743"	"14100"	"14100"	"14080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"412.1"	""	"438.1"	""	"454.8"	""	"611.4"	"6.3"	"690.7"	"752.8"	""	"817"	"17"	"36.000"	"29.000"	"0.805734687702918"	"16"	"0.0008731"	"0.00872"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPYYGK"	"[K].yFPYYGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"698.38953"	"1395.77178"	"1395.77130"	"0.34"	"0.00024"	"6/50"	"6"	"50"	"5864798.53564453"	"HCD"	"MS2"	"53.77111"	"526.5"	"100.000"	"47.7474"	"13926"	"13926"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"627.1"	""	"675.7"	""	"678.2"	""	"838.0"	"1.5"	"1152.7"	"1027.3"	""	"819"	"23"	"36.000"	"29.000"	"0.186747117082056"	"17"	"0.003286"	"0.07383"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPYYGK"	"[K].yFPYYGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"698.38971"	"1395.77214"	"1395.77130"	"0.61"	"0.00042"	"6/50"	"6"	"50"	"6245977.87481689"	"HCD"	"MS2"	"49.94976"	"570.4"	"100.000"	"48.0251"	"14087"	"14087"	"14066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"710.4"	""	"748.7"	""	"740.8"	""	"905.0"	"5.0"	"1200.9"	"1104.4"	""	"819"	"22"	"36.000"	"29.000"	"0.28790811499243"	"17"	"0.004291"	"0.1106"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFVPDIYSR"	"[K].aVFVPDIYSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.39478"	"1395.78227"	"1395.78337"	"-0.78"	"-0.00055"	"5/78"	"5"	"78"	"583408.403503418"	"HCD"	"MS2"	"100"	"63.7"	"100.000"	"53.3562"	"16257"	"16257"	"16247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.1"	""	"79.8"	""	"89.5"	""	"113.3"	"0.6"	"124.3"	"134.3"	""	"769"	"1"	"35.000"	"28.000"	"33.18152516164"	"13"	"0.00348"	"0.07808"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAMDVIGGK"	"[R].fAMDVIGGk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"698.40460"	"1395.80193"	"1395.80703"	"-3.65"	"-0.00255"	"8/64"	"8"	"64"	"1801536.5557251"	"HCD"	"MS2"	"35.7205"	"150.6"	"100.000"	"54.4512"	"16690"	"16690"	"16667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"217.4"	""	"234.3"	""	"243.3"	""	"215.6"	""	"247.9"	"267.5"	""	"719"	"18"	"35.000"	"28.000"	"0.604921324954833"	"16"	"0.0001308"	"0.0002943"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNYIEGTK"	"[R].lNYIEGTk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"698.41473"	"1395.82219"	"1395.82479"	"-1.86"	"-0.00130"	"14/72"	"14"	"72"	"9168019.12237549"	"HCD"	"MS2"	"0"	"738.8"	"100.000"	"40.9696"	"11172"	"11172"	"11141"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1112.6"	""	"1027.6"	""	"934.8"	""	"1222.9"	""	"1374.9"	"1327.3"	""	"519"	"48"	"34.000"	"27.000"	"0.000430662802480047"	"21"	"0.0001889"	"0.0008157"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQGEVYK"	"[R].lTQGEVYk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"698.41504"	"1395.82280"	"1395.82479"	"-1.42"	"-0.00099"	"10/72"	"10"	"72"	"835384.311096191"	"HCD"	"MS2"	"0"	"85.8"	"100.000"	"35.9782"	"9127"	"9127"	"9099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.4"	""	"90.9"	""	"98.8"	""	"137.5"	""	"165.4"	"205.1"	""	"511"	"18"	"34.000"	"27.000"	"0.365082406399587"	"22"	"0.0001889"	"0.0004169"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQGEVYK"	"[R].lTQGEVYk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"698.41522"	"1395.82317"	"1395.82479"	"-1.16"	"-0.00081"	"12/72"	"12"	"72"	"1247897.74249268"	"HCD"	"MS2"	"0"	"122.9"	"100.000"	"36.0080"	"9182"	"9182"	"9161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.7"	""	"136.1"	""	"162.7"	""	"184.3"	""	"229.5"	"274.1"	""	"511"	"32"	"34.000"	"27.000"	"0.0167259542474189"	"25"	"0.0001889"	"0.0004557"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNYIEGTK"	"[R].lNYIEGTk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"698.41656"	"1395.82585"	"1395.82479"	"0.76"	"0.00053"	"7/72"	"7"	"72"	"10048530.4359741"	"HCD"	"MS2"	"10.4826"	"795.8"	"100.000"	"41.1694"	"11297"	"11297"	"11277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1200.4"	""	"1100.6"	""	"1072.8"	""	"1287.3"	"2.0"	"1487.6"	"1386.4"	""	"521"	"44"	"34.000"	"27.000"	"0.000932841218652367"	"19"	"0.0002723"	"0.001371"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVSYWR"	"[K].kVVSYWR.[N]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"465.95465"	"1395.84940"	"1395.85128"	"-1.34"	"-0.00063"	"5/60"	"5"	"60"	"8321260.01397705"	"HCD"	"MS2"	"0"	"512.2"	"99.917"	"34.6048"	"8606"	"8606"	"8586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"867.3"	""	"873.5"	""	"841.4"	""	"685.3"	"3.8"	"813.5"	"752.6"	""	"414"	"7"	"33.000"	"26.000"	"4.16840919721514"	"13"	"0.00252"	"0.03871"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVSYWR"	"[K].kVVSYWR.[N]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"465.95486"	"1395.85004"	"1395.85128"	"-0.89"	"-0.00041"	"6/60"	"6"	"60"	"7381485.07025146"	"HCD"	"MS2"	"13.5239"	"456.4"	"100.000"	"34.5060"	"8523"	"8523"	"8499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"754.3"	""	"792.5"	""	"748.2"	""	"601.0"	""	"752.1"	"666.7"	""	"403"	"5"	"33.000"	"26.000"	"5.85160564874587"	"13"	"0.00119"	"0.01601"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLPMELPIR"	"[R].vVLPMELPIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.43280"	"1395.85832"	"1395.85951"	"-0.85"	"-0.00059"	"6/72"	"6"	"72"	"1982941.45587158"	"HCD"	"MS2"	"16.74085"	"90.2"	"100.000"	"68.9693"	"22555"	"22555"	"22538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.4"	""	"124.7"	""	"134.3"	""	"116.0"	""	"170.1"	"190.0"	""	"289"	"28"	"31.000"	"24.000"	"0.020790639455797"	"14"	"0.0003839"	"0.00186"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLPMELPIR"	"[R].vVLPMELPIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.43280"	"1395.85832"	"1395.85951"	"-0.85"	"-0.00059"	"6/72"	"6"	"72"	"15574130.1203003"	"HCD"	"MS2"	"10.35747"	"428.3"	"89.223"	"68.5344"	"22428"	"22428"	"22410"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"568.3"	""	"685.7"	""	"675.2"	""	"510.2"	""	"763.3"	"856.9"	""	"289"	"25"	"31.000"	"24.000"	"0.0489629805621148"	"14"	"0.0001889"	"0.000777"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLPMELPIR"	"[R].vVLPMELPIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"698.43317"	"1395.85906"	"1395.85951"	"-0.32"	"-0.00023"	"4/72"	"4"	"72"	"15668756.2008057"	"HCD"	"MS2"	"11.54837"	"489.1"	"100.000"	"68.6601"	"22428"	"22428"	"22410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"680.3"	""	"755.0"	""	"759.9"	""	"563.9"	""	"903.9"	"973.8"	""	"278"	"18"	"31.000"	"24.000"	"0.206545054277894"	"19"	"0.0006037"	"0.003865"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLPMELPIR"	"[R].vVLPMELPIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"465.95792"	"1395.85920"	"1395.85951"	"-0.22"	"-0.00010"	"6/72"	"6"	"72"	"927552.172180176"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"68.6403"	"22472"	"22472"	"22442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.3"	""	"16.3"	""	"21.2"	""	"28.1"	"2.0"	"35.6"	"32.2"	""	"278"	"39"	"31.000"	"24.000"	"0.00195891142980641"	"16"	"0"	"8.679E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLPMELPIR"	"[R].vVLPMELPIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.43329"	"1395.85930"	"1395.85951"	"-0.15"	"-0.00010"	"12/72"	"12"	"72"	"1811121.63140869"	"HCD"	"MS2"	"17.14925"	"88.1"	"100.000"	"68.8502"	"22557"	"22557"	"22538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.1"	""	"128.9"	""	"133.9"	""	"114.1"	""	"162.1"	"172.9"	""	"278"	"34"	"31.000"	"24.000"	"0.00520013717698154"	"15"	"0.002099"	"0.03173"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPELQLPK"	"[RP].lPELQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"465.97046"	"1395.89682"	"1395.89756"	"-0.53"	"-0.00024"	"5/62"	"5"	"62"	"7576073.02642822"	"HCD"	"MS2"	"6.037504"	"219.2"	"100.000"	"58.3823"	"18297"	"18297"	"18277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.7"	""	"247.8"	""	"272.3"	""	"402.5"	""	"455.1"	"475.9"	""	"115"	"28"	"27.000"	"20.000"	"0.00972003535694877"	""	"0.0003839"	"0.002074"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPELQLPK"	"[RP].lPELQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"465.97049"	"1395.89692"	"1395.89756"	"-0.46"	"-0.00021"	"5/62"	"5"	"62"	"7166186.14337158"	"HCD"	"MS2"	"12.07625"	"202.0"	"100.000"	"58.0716"	"18170"	"18170"	"18149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"235.1"	""	"224.8"	""	"256.9"	""	"385.1"	"0.6"	"392.8"	"422.5"	""	"115"	"27"	"27.000"	"20.000"	"0.010560095474253"	""	"0.0003839"	"0.002102"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPELQLPK"	"[RP].lPELQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"465.97055"	"1395.89710"	"1395.89756"	"-0.33"	"-0.00015"	"5/62"	"5"	"62"	"7181296.72088623"	"HCD"	"MS2"	"0"	"209.2"	"94.838"	"58.2179"	"18176"	"18176"	"18155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.9"	""	"240.7"	""	"261.1"	""	"376.7"	""	"446.9"	"451.1"	""	"121"	"32"	"27.000"	"20.000"	"0.00386149409145282"	""	"0.0002723"	"0.001369"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPELQLPK"	"[RP].lPELQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"465.97055"	"1395.89710"	"1395.89756"	"-0.33"	"-0.00015"	"5/62"	"5"	"62"	"7848738.12121582"	"HCD"	"MS2"	"0"	"218.2"	"100.000"	"57.9140"	"18052"	"18052"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.6"	""	"248.9"	""	"241.3"	""	"420.5"	""	"456.0"	"462.0"	""	"121"	"32"	"27.000"	"20.000"	"0.00403418095374242"	""	"0.0003839"	"0.001807"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPELQLPK"	"[RP].lPELQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"698.45245"	"1395.89763"	"1395.89756"	"0.05"	"0.00004"	"8/62"	"8"	"62"	"12048253.638916"	"HCD"	"MS2"	"23.68703"	"530.6"	"100.000"	"58.0500"	"18108"	"18108"	"18091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"612.1"	""	"578.0"	""	"638.2"	""	"1027.4"	""	"1078.1"	"1113.5"	""	"121"	"26"	"27.000"	"20.000"	"0.0145799278435539"	"18"	"0.0007076"	"0.006861"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPELQLPK"	"[RP].lPELQLPk.[MV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"698.45258"	"1395.89787"	"1395.89756"	"0.23"	"0.00016"	"8/62"	"8"	"62"	"11922920.7313232"	"HCD"	"MS2"	"25.24016"	"364.6"	"71.175"	"58.2165"	"18230"	"18230"	"18213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"409.9"	""	"411.9"	""	"474.3"	""	"684.6"	""	"746.3"	"741.6"	""	"121"	"26"	"27.000"	"20.000"	"0.0143798837340805"	"18"	"0.0006737"	"0.006412"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVMmGPYR.[Q]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3056"	"0.0000"	"1"	"1"	"1"	"698.86639"	"1396.72551"	"1396.72784"	"-1.67"	"-0.00117"	"7/88"	"7"	"88"	"4064727.11102295"	"HCD"	"MS2"	"0"	"200.5"	"100.000"	"41.3318"	"11320"	"11320"	"11301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.7"	""	"334.7"	""	"351.6"	""	"224.4"	"3.0"	"331.5"	"325.4"	""	"711"	"36"	"35.000"	"28.000"	"0.00814403450558943"	"16"	"0.0003839"	"0.001645"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVMmGPYR.[Q]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3143"	"0.0000"	"1"	"1"	"1"	"698.86670"	"1396.72612"	"1396.72784"	"-1.23"	"-0.00086"	"7/88"	"7"	"88"	"4731162.22296143"	"HCD"	"MS2"	"0"	"208.7"	"100.000"	"41.5496"	"11453"	"11453"	"11437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"324.7"	""	"335.0"	""	"388.1"	""	"241.6"	""	"339.6"	"344.7"	""	"703"	"35"	"35.000"	"28.000"	"0.0106887108652521"	"16"	"0.000494"	"0.002696"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVmMGPYR.[Q]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.0435"	"0.0000"	"1"	"1"	"1"	"698.86700"	"1396.72673"	"1396.72784"	"-0.80"	"-0.00056"	"6/88"	"6"	"88"	"746748.739746094"	"HCD"	"MS2"	"0"	"82.0"	"100.000"	"44.6992"	"12733"	"12733"	"12705"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.2"	""	"100.2"	""	"103.8"	""	"136.3"	""	"161.9"	"158.6"	""	"719"	"23"	"35.000"	"28.000"	"0.186079656086229"	"21"	"0.001587"	"0.02127"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVMmGPYR.[Q]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	""	"0.0435"	"2"	"2"	"2"	"698.86700"	"1396.72673"	"1396.72784"	"-0.80"	"-0.00056"	"7/88"	"7"	"88"	"746748.739746094"	"HCD"	"MS2"	"0"	"82.0"	"100.000"	"44.6992"	"12733"	"12733"	"12705"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.2"	""	"100.2"	""	"103.8"	""	"136.3"	""	"161.9"	"158.6"	""	"719"	"22"	"35.000"	"28.000"	"0.241935107934212"	"21"	"0.0008453"	"0.008216"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVMmGPYR.[Q]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"698.86719"	"1396.72710"	"1396.72784"	"-0.53"	"-0.00037"	"7/88"	"7"	"88"	"5971730.54669189"	"HCD"	"MS2"	"18.31495"	"251.6"	"100.000"	"41.8408"	"11572"	"11572"	"11554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"415.5"	""	"358.6"	""	"381.4"	""	"342.6"	""	"440.2"	"444.8"	""	"723"	"9"	"35.000"	"28.000"	"4.16014340603414"	"13"	"0.00955"	"0.4272"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVMmGPYR.[Q]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"698.86749"	"1396.72771"	"1396.72784"	"-0.10"	"-0.00007"	"6/88"	"6"	"88"	"7240675.91784668"	"HCD"	"MS2"	"24.7825"	"292.7"	"100.000"	"41.6207"	"11438"	"11438"	"11419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"454.1"	""	"416.8"	""	"433.3"	""	"394.6"	"3.1"	"526.4"	"543.7"	""	"715"	"18"	"35.000"	"28.000"	"0.585161906410441"	"14"	"0.003383"	"0.07634"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVmMGPYR.[Q]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"698.86761"	"1396.72795"	"1396.72784"	"0.08"	"0.00005"	"6/88"	"6"	"88"	"2214823.68817139"	"HCD"	"MS2"	"0"	"145.0"	"100.000"	"40.4827"	"11016"	"11016"	"10989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.1"	""	"194.2"	""	"191.2"	""	"199.2"	"3.3"	"271.0"	"278.0"	""	"715"	"27"	"35.000"	"28.000"	"0.0798502069661914"	"14"	"0.0005564"	"0.003432"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVmMGPYR.[Q]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"698.86774"	"1396.72820"	"1396.72784"	"0.25"	"0.00018"	"7/88"	"7"	"88"	"2056849.18701172"	"HCD"	"MS2"	"10.32651"	"140.2"	"100.000"	"40.3434"	"10915"	"10915"	"10885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.7"	""	"195.9"	""	"192.3"	""	"181.1"	"4.6"	"265.0"	"271.8"	""	"709"	"33"	"35.000"	"28.000"	"0.0178490965815312"	"16"	"0.0006737"	"0.006482"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSSIMEK"	"[K].mLSSIMEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"698.89978"	"1396.79228"	"1396.79441"	"-1.53"	"-0.00107"	"7/64"	"7"	"64"	"2633148.01507568"	"HCD"	"MS2"	"28.19808"	"216.7"	"100.000"	"51.8586"	"15598"	"15598"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"335.9"	""	"286.1"	""	"272.1"	""	"277.8"	"0.6"	"405.0"	"478.0"	""	"704"	"42"	"35.000"	"28.000"	"0.0021554733788712"	"18"	"0.0001889"	"0.0006907"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSSIMEK"	"[K].mLSSIMEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"698.90094"	"1396.79460"	"1396.79441"	"0.13"	"0.00009"	"14/64"	"14"	"64"	"3936911.81298828"	"HCD"	"MS2"	"35.85113"	"283.5"	"100.000"	"51.8867"	"15659"	"15659"	"15638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"444.6"	""	"407.6"	""	"347.3"	""	"398.6"	""	"488.7"	"601.0"	""	"704"	"45"	"35.000"	"28.000"	"0.00105813885852514"	"19"	"0.0001889"	"0.0004411"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIIFANYIAR"	"[R].sIIFANYIAR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63487"	"Ras-related GTP-binding protein B OS=Rattus norvegicus OX=10116 GN=RragB PE=1 SV=1"	"Q63487; Q63486"	"Ras-related GTP-binding protein B OS=Rattus norvegicus OX=10116 GN=RragB PE=1 SV=1; Ras-related GTP-binding protein A OS=Rattus norvegicus OX=10116 GN=Rraga PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"698.91077"	"1396.81426"	"1396.81500"	"-0.53"	"-0.00037"	"6/80"	"6"	"80"	"2919736.64263916"	"HCD"	"MS2"	"46.06335"	"163.6"	"100.000"	"57.4120"	"17847"	"17847"	"17819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"227.7"	""	"250.3"	""	"261.9"	""	"262.8"	""	"264.2"	"281.4"	""	"518"	"39"	"34.000"	"27.000"	"0.00318639611640407"	"20"	"0.0001889"	"0.0003989"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIIFANYIAR"	"[R].sIIFANYIAR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63487"	"Ras-related GTP-binding protein B OS=Rattus norvegicus OX=10116 GN=RragB PE=1 SV=1"	"Q63487; Q63486"	"Ras-related GTP-binding protein B OS=Rattus norvegicus OX=10116 GN=RragB PE=1 SV=1; Ras-related GTP-binding protein A OS=Rattus norvegicus OX=10116 GN=Rraga PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"698.91101"	"1396.81474"	"1396.81500"	"-0.18"	"-0.00013"	"7/80"	"7"	"80"	"3338713.76269531"	"HCD"	"MS2"	"25.78598"	"178.0"	"100.000"	"57.6457"	"17996"	"17996"	"17973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.9"	""	"289.9"	""	"271.5"	""	"286.3"	"0.8"	"288.4"	"294.7"	""	"529"	"54"	"34.000"	"27.000"	"0.000116795383324951"	"22"	"0"	"0.0001659"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLEYWK"	"[K].sLLEYWk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"698.91522"	"1396.82317"	"1396.82406"	"-0.64"	"-0.00045"	"12/54"	"12"	"54"	"1975248.25921631"	"HCD"	"MS2"	"22.37019"	"162.8"	"100.000"	"61.2079"	"19393"	"19393"	"19369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.2"	""	"211.2"	""	"235.6"	""	"276.6"	"0.2"	"284.4"	"310.7"	""	"466"	"31"	"33.000"	"26.000"	"0.0174323493619099"	"26"	"0.0002277"	"0.00114"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGEPVVK"	"[R].fYGEPVVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.91528"	"1396.82329"	"1396.82406"	"-0.55"	"-0.00038"	"10/56"	"10"	"56"	"3064678.59588623"	"HCD"	"MS2"	"0"	"266.0"	"100.000"	"42.6324"	"11850"	"11850"	"11820"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"396.0"	""	"389.3"	""	"381.4"	""	"374.1"	"9.4"	"485.0"	"483.6"	""	"466"	"7"	"33.000"	"26.000"	"4.23990300056126"	"13"	"0.0004166"	"0.002278"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLEYWK"	"[K].sLLEYWk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"698.91534"	"1396.82341"	"1396.82406"	"-0.46"	"-0.00032"	"5/54"	"5"	"54"	"1674430.91046143"	"HCD"	"MS2"	"31.7887"	"138.1"	"100.000"	"61.4198"	"19533"	"19533"	"19507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.9"	""	"174.6"	""	"186.6"	""	"243.5"	"0.5"	"254.6"	"259.8"	""	"465"	"31"	"33.000"	"26.000"	"0.017923505655748"	""	"0.0002277"	"0.001319"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"698.93036"	"1396.85344"	"1396.86044"	"-5.01"	"-0.00350"	"12/56"	"12"	"56"	"29548847.2879639"	"HCD"	"MS2"	"0.9198682"	"685.7"	"38.234"	"55.0074"	"16918"	"16918"	"16901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1050.7"	""	"1101.2"	""	"1021.1"	""	"1076.8"	"1.2"	"1077.9"	"1154.0"	""	"301"	"34"	"31.000"	"24.000"	"0.00604695170327655"	"16"	"0.0006037"	"0.00507"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"698.93085"	"1396.85442"	"1396.86044"	"-4.31"	"-0.00301"	"12/56"	"12"	"56"	"33406712.8205566"	"HCD"	"MS2"	"1.396871"	"834.4"	"43.629"	"55.3197"	"17046"	"17046"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1290.1"	""	"1342.8"	""	"1247.5"	""	"1307.8"	"3.9"	"1272.5"	"1422.0"	""	"292"	"34"	"31.000"	"24.000"	"0.00579899662225383"	"16"	"0.000523"	"0.003071"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"698.93085"	"1396.85442"	"1396.86044"	"-4.31"	"-0.00301"	"12/56"	"12"	"56"	"27688503.4343262"	"HCD"	"MS2"	"0.6726754"	"703.1"	"42.025"	"54.9577"	"16844"	"16844"	"16828"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1097.9"	""	"1075.7"	""	"1065.2"	""	"1096.2"	"2.0"	"1140.3"	"1170.2"	""	"292"	"34"	"31.000"	"24.000"	"0.00597520563205815"	"20"	"0.0006037"	"0.004516"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"698.93140"	"1396.85552"	"1396.86044"	"-3.53"	"-0.00246"	"12/56"	"12"	"56"	"24036214.619812"	"HCD"	"MS2"	"4.444748"	"1049.3"	"70.353"	"54.6611"	"16722"	"16722"	"16704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1609.4"	""	"1691.2"	""	"1645.7"	""	"1637.8"	""	"1638.8"	"1694.7"	""	"282"	"33"	"31.000"	"24.000"	"0.00782022255270654"	"16"	"0.0004166"	"0.002382"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"698.93170"	"1396.85613"	"1396.86044"	"-3.09"	"-0.00216"	"12/56"	"12"	"56"	"32997364.2485352"	"HCD"	"MS2"	"2.39719"	"619.9"	"31.042"	"55.2702"	"16972"	"16972"	"16955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"932.9"	""	"982.3"	""	"937.3"	""	"972.4"	"4.5"	"977.3"	"1054.4"	""	"286"	"34"	"31.000"	"24.000"	"0.00561482257621428"	"16"	"0.0006037"	"0.00377"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"466.29108"	"1396.85868"	"1396.86044"	"-1.27"	"-0.00059"	"6/56"	"6"	"56"	"21826756.2897949"	"HCD"	"MS2"	"2.365911"	"326.9"	"62.774"	"54.8081"	"16782"	"16782"	"16764"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"486.0"	""	"509.5"	""	"509.9"	""	"516.5"	""	"513.1"	"559.8"	""	"285"	"29"	"31.000"	"24.000"	"0.0195800981439283"	""	"0.0002277"	"0.001326"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"466.29114"	"1396.85886"	"1396.86044"	"-1.13"	"-0.00053"	"9/56"	"9"	"56"	"5024567.43804932"	"HCD"	"MS2"	"5.385082"	"151.8"	"100.000"	"55.6809"	"17193"	"17193"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.7"	""	"218.5"	""	"223.9"	""	"243.7"	""	"258.8"	"261.0"	""	"285"	"21"	"31.000"	"24.000"	"0.121847006586067"	"22"	"0.0003839"	"0.001726"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"466.29132"	"1396.85941"	"1396.86044"	"-0.74"	"-0.00035"	"6/56"	"6"	"56"	"26194917.6829834"	"HCD"	"MS2"	"4.097352"	"342.1"	"58.607"	"55.1208"	"16910"	"16910"	"16891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"522.6"	""	"511.2"	""	"537.8"	""	"532.8"	""	"556.8"	"578.5"	""	"272"	"27"	"31.000"	"24.000"	"0.0265178865567094"	""	"0.0002277"	"0.001274"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.93335"	"1396.85942"	"1396.86044"	"-0.73"	"-0.00051"	"7/56"	"7"	"56"	"3222930.85015869"	"HCD"	"MS2"	"67.32838"	"169.3"	"100.000"	"54.3689"	"16603"	"16603"	"16577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.2"	""	"226.1"	""	"224.9"	""	"387.6"	""	"275.1"	"273.5"	""	"272"	"12"	"31.000"	"24.000"	"0.870039376256402"	"13"	"0.001217"	"0.01768"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"466.29135"	"1396.85950"	"1396.86044"	"-0.68"	"-0.00031"	"6/56"	"6"	"56"	"20546102.2521973"	"HCD"	"MS2"	"3.185812"	"370.8"	"79.488"	"55.0510"	"16935"	"16935"	"16917"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"579.3"	""	"575.1"	""	"565.5"	""	"567.1"	"1.5"	"590.8"	"626.2"	""	"272"	"30"	"31.000"	"24.000"	"0.0128392279174886"	""	"0.0001889"	"0.0009558"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"466.29135"	"1396.85950"	"1396.86044"	"-0.68"	"-0.00031"	"9/56"	"9"	"56"	"4533795.52850342"	"HCD"	"MS2"	"3.734026"	"138.1"	"100.000"	"55.4975"	"17065"	"17065"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.8"	""	"211.0"	""	"211.6"	""	"205.0"	"0.6"	"243.5"	"242.0"	""	"272"	"18"	"31.000"	"24.000"	"0.219047806384245"	"20"	"0.0002277"	"0.001198"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"698.93347"	"1396.85967"	"1396.86044"	"-0.56"	"-0.00039"	"12/56"	"12"	"56"	"8573585.22918701"	"HCD"	"MS2"	"0"	"486.7"	"95.063"	"55.6438"	"17178"	"17178"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"715.8"	""	"739.0"	""	"746.4"	""	"733.6"	"4.0"	"811.5"	"854.4"	""	"272"	"34"	"31.000"	"24.000"	"0.00557877580061786"	"19"	"0.0004557"	"0.002572"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"466.29150"	"1396.85996"	"1396.86044"	"-0.35"	"-0.00016"	"6/56"	"6"	"56"	"26837880.3484497"	"HCD"	"MS2"	"3.391294"	"405.0"	"68.182"	"55.3633"	"17063"	"17063"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"592.1"	""	"641.3"	""	"622.6"	""	"622.9"	""	"646.1"	"709.5"	""	"272"	"28"	"31.000"	"24.000"	"0.020967126160114"	""	"0.0003839"	"0.001544"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"698.93378"	"1396.86028"	"1396.86044"	"-0.12"	"-0.00008"	"12/56"	"12"	"56"	"9097177.20355225"	"HCD"	"MS2"	"4.325165"	"546.6"	"100.000"	"54.6951"	"16790"	"16790"	"16773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"862.8"	""	"860.4"	""	"842.4"	""	"898.9"	"2.8"	"865.3"	"832.5"	""	"272"	"34"	"31.000"	"24.000"	"0.00569559248560369"	"22"	"0.0004166"	"0.002176"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"466.29169"	"1396.86051"	"1396.86044"	"0.05"	"0.00002"	"6/56"	"6"	"56"	"11112396.0536499"	"HCD"	"MS2"	"1.790535"	"263.2"	"100.000"	"54.7455"	"16810"	"16810"	"16789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"402.8"	""	"413.3"	""	"407.8"	""	"427.2"	""	"423.8"	"413.6"	""	"272"	"28"	"31.000"	"24.000"	"0.0215049733340772"	""	"0.0001889"	"0.000538"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"466.29184"	"1396.86097"	"1396.86044"	"0.37"	"0.00017"	"6/56"	"6"	"56"	"6399251.83685303"	"HCD"	"MS2"	"11.20317"	"165.0"	"100.000"	"54.4930"	"16654"	"16654"	"16624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.8"	""	"272.8"	""	"259.5"	""	"256.3"	"0.8"	"264.1"	"258.6"	""	"274"	"26"	"31.000"	"24.000"	"0.033940682189576"	"23"	"0.0001889"	"0.0006356"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAILYFPK"	"[R].sAILYFPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"698.93475"	"1396.86223"	"1396.86044"	"1.28"	"0.00089"	"7/56"	"7"	"56"	"2210215.20043945"	"HCD"	"MS2"	"26.58134"	"166.1"	"100.000"	"55.6381"	"17122"	"17122"	"17099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.4"	""	"243.1"	""	"251.7"	""	"260.4"	""	"271.3"	"301.8"	""	"271"	"27"	"31.000"	"24.000"	"0.0270358043678283"	"22"	"0.0004557"	"0.002572"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGPNLHGLFGR"	"[K].tGPNLHGLFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"466.59940"	"1397.78363"	"1397.78510"	"-1.05"	"-0.00049"	"9/94"	"9"	"94"	"20823737.5848999"	"HCD"	"MS2"	"30.14227"	"289.3"	"61.203"	"38.6388"	"10262"	"10262"	"10241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"375.0"	""	"473.3"	""	"390.2"	""	"462.7"	"4.0"	"472.8"	"561.0"	""	"668"	"44"	"35.000"	"28.000"	"0.00142477559279732"	"15"	"0"	"7.907E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGPNLHGLFGR"	"[K].tGPNLHGLFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"P62898"	"Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"466.59982"	"1397.78492"	"1397.78510"	"-0.13"	"-0.00006"	"9/94"	"9"	"94"	"18292615.7191162"	"HCD"	"MS2"	"32.97324"	"320.2"	"68.578"	"38.5253"	"10172"	"10172"	"10151"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"390.3"	""	"567.1"	""	"437.1"	""	"480.7"	"4.1"	"537.8"	"616.1"	""	"651"	"40"	"35.000"	"28.000"	"0.00349583553717076"	"15"	"0"	"4.098E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGFGDIFK"	"[RK].gVGFGDIFk.[ED]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"F1LRS8; Q925Q9"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2; SH3 domain-containing kinase-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Sh3kbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"699.41321"	"1397.81914"	"1397.81931"	"-0.12"	"-0.00008"	"8/64"	"8"	"64"	"3319185.86383057"	"HCD"	"MS2"	"35.42334"	"281.0"	"100.000"	"59.8667"	"18845"	"18845"	"18825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.3"	""	"306.6"	""	"358.3"	""	"545.0"	""	"587.6"	"540.4"	""	"509"	"24"	"34.000"	"27.000"	"0.104637604021101"	"21"	"0.0001308"	"0.0002909"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVYQAMK"	"[R].lSVYQAMk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"699.41364"	"1397.81999"	"1397.82268"	"-1.92"	"-0.00134"	"10/62"	"10"	"62"	"3224013.60083008"	"HCD"	"MS2"	"0"	"249.9"	"100.000"	"43.3925"	"12201"	"12201"	"12185"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"381.4"	""	"418.1"	""	"379.9"	""	"337.4"	""	"403.7"	"443.5"	""	"517"	"22"	"34.000"	"27.000"	"0.166901618205459"	""	"0.0002723"	"0.001367"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGFGDIFK"	"[RK].gVGFGDIFk.[ED]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"F1LRS8; Q925Q9"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2; SH3 domain-containing kinase-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Sh3kbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"699.41406"	"1397.82085"	"1397.81931"	"1.10"	"0.00077"	"7/64"	"7"	"64"	"3126316.86968994"	"HCD"	"MS2"	"39.82088"	"240.8"	"100.000"	"60.0045"	"18955"	"18955"	"18932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.2"	""	"261.9"	""	"298.4"	""	"472.9"	"0.1"	"504.4"	"456.0"	""	"515"	"26"	"34.000"	"27.000"	"0.0581804710831901"	"23"	"0.0001308"	"0.0002155"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVYQAMK"	"[R].lSVYQAMk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"699.41431"	"1397.82134"	"1397.82268"	"-0.96"	"-0.00067"	"12/62"	"12"	"62"	"3675131.03448486"	"HCD"	"MS2"	"0"	"308.6"	"100.000"	"43.1697"	"12061"	"12061"	"12047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"445.2"	""	"498.5"	""	"489.7"	""	"389.9"	"3.5"	"532.7"	"561.0"	""	"515"	"32"	"34.000"	"27.000"	"0.0172495286924756"	"23"	"0.0001889"	"0.0008443"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAHEVGWK"	"[R].lAHEVGWk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"699.41833"	"1397.82939"	"1397.83054"	"-0.82"	"-0.00057"	"6/56"	"6"	"56"	"1170376.53167725"	"HCD"	"MS2"	"0"	"93.4"	"100.000"	"35.7514"	"9077"	"9077"	"9049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.7"	""	"117.9"	""	"137.4"	""	"163.0"	"1.4"	"181.3"	"151.3"	""	"476"	"38"	"33.000"	"26.000"	"0.00397719566205948"	"16"	"0.0001308"	"0.0002684"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAHEVGWK"	"[R].lAHEVGWk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"466.61493"	"1397.83023"	"1397.83054"	"-0.22"	"-0.00010"	"10/56"	"10"	"56"	"47873362.5628662"	"HCD"	"MS2"	"30.04208"	"882.6"	"42.664"	"35.6894"	"9051"	"9051"	"9033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1170.0"	""	"1189.4"	""	"1338.1"	""	"1483.4"	""	"1700.9"	"1484.9"	""	"477"	"31"	"33.000"	"26.000"	"0.0169234297659268"	"17"	"0.0001889"	"0.0008803"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLELNAVQR"	"[R].lLLELNAVQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"699.43744"	"1397.86760"	"1397.86777"	"-0.12"	"-0.00008"	"8/80"	"8"	"80"	"2742023.73266602"	"HCD"	"MS2"	"7.725083"	"137.7"	"100.000"	"59.5195"	"18703"	"18703"	"18681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.7"	""	"186.9"	""	"191.4"	""	"249.0"	"1.0"	"254.3"	"266.7"	""	"272"	"39"	"31.000"	"24.000"	"0.00177230681869513"	""	"0"	"0.0001355"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQNHNNK"	"[R].sVQNHNNk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"466.93253"	"1398.78302"	"1398.78538"	"-1.69"	"-0.00079"	"7/66"	"7"	"66"	"264868.975219727"	"HCD"	"MS2"	"12.30306"	"20.9"	"100.000"	"19.0130"	"2447"	"2447"	"2428"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.2"	""	"26.6"	""	"28.6"	""	"45.8"	""	"31.5"	"35.0"	""	"674"	"10"	"35.000"	"28.000"	"3.7036496788876"	"13"	"0.001158"	"0.01542"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQNHNNK"	"[R].sVQNHNNk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"466.93262"	"1398.78330"	"1398.78538"	"-1.49"	"-0.00069"	"8/66"	"8"	"66"	"537279.393737793"	"HCD"	"MS2"	"39.324"	"36.7"	"100.000"	"19.1461"	"2469"	"2469"	"2461"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.8"	""	"38.5"	""	"45.8"	""	"90.5"	""	"62.7"	"59.6"	""	"674"	"14"	"35.000"	"28.000"	"1.39517890414249"	"13"	"0.0004166"	"0.002354"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISLSDYK"	"[K].dISLSDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"699.89612"	"1398.78496"	"1398.78807"	"-2.22"	"-0.00155"	"7/66"	"7"	"66"	"4387021.23608398"	"HCD"	"MS2"	"12.84985"	"387.5"	"100.000"	"44.2427"	"12547"	"12547"	"12524"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"655.0"	""	"557.6"	""	"576.5"	""	"605.5"	"1.8"	"639.5"	"627.2"	""	"666"	"46"	"35.000"	"28.000"	"0.000769917575128473"	"27"	"0.0001889"	"0.0004676"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISLSDYK"	"[K].dISLSDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"699.89648"	"1398.78569"	"1398.78807"	"-1.70"	"-0.00119"	"7/66"	"7"	"66"	"6691036.06268311"	"HCD"	"MS2"	"0"	"562.7"	"100.000"	"44.0269"	"12409"	"12409"	"12390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"974.9"	""	"777.0"	""	"861.7"	""	"867.4"	""	"911.2"	"928.2"	""	"666"	"47"	"35.000"	"28.000"	"0.0007285246207752"	"27"	"0.0001889"	"0.0006298"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSELTSEK"	"[R].fSELTSEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"699.89679"	"1398.78630"	"1398.78807"	"-1.26"	"-0.00088"	"7/66"	"7"	"66"	"793373.001525879"	"HCD"	"MS2"	"0"	"89.4"	"100.000"	"40.2944"	"10939"	"10939"	"10909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.1"	""	"108.9"	""	"132.6"	""	"149.2"	"2.7"	"176.6"	"164.6"	""	"644"	"37"	"35.000"	"28.000"	"0.00709342321103212"	"28"	"7.476E-05"	"0.0001928"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.0500"	"0.0000"	"1"	"1"	"1"	"466.93570"	"1398.79255"	"1398.77398"	"13.28"	"0.00619"	"8/112"	"8"	"112"	"21480809.6220703"	"HCD"	"MS2"	"19.84697"	"233.4"	"73.379"	"39.2737"	"10523"	"10523"	"10494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"316.7"	"2.2"	"325.1"	""	"331.3"	""	"354.3"	""	"428.9"	"454.7"	"NoQuanLabels"	"691"	"60"	"35.000"	"28.000"	"3.48696872139495E-05"	"28"	"0.0001889"	"0.0005703"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LLPLEEHYR"	"[K].lLPLEEHYR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0500"	"2"	"2"	"2"	"466.93570"	"1398.79255"	"1398.79427"	"-1.23"	"-0.00057"	"8/66"	"8"	"66"	"21480809.6220703"	"HCD"	"MS2"	"19.84697"	"233.4"	"73.379"	"39.2737"	"10523"	"10523"	"10494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"316.7"	"2.2"	"325.1"	""	"331.3"	""	"354.3"	""	"428.9"	"454.7"	""	"691"	"57"	"35.000"	"28.000"	"6.40395175889818E-05"	"28"	"0"	"1.329E-05"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.0339"	"0.0000"	"1"	"1"	"1"	"466.93588"	"1398.79309"	"1398.77398"	"13.67"	"0.00637"	"8/112"	"8"	"112"	"19392269.194458"	"HCD"	"MS2"	"19.91122"	"307.0"	"100.000"	"39.1645"	"10435"	"10435"	"10406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"415.1"	""	"429.1"	""	"420.6"	""	"511.6"	"1.1"	"573.0"	"558.4"	"NoQuanLabels"	"675"	"59"	"35.000"	"28.000"	"3.84834303301894E-05"	""	"0.0001889"	"0.0007946"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LLPLEEHYR"	"[K].lLPLEEHYR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0339"	"2"	"2"	"2"	"466.93588"	"1398.79309"	"1398.79427"	"-0.84"	"-0.00039"	"8/66"	"8"	"66"	"19392269.194458"	"HCD"	"MS2"	"19.91122"	"307.0"	"100.000"	"39.1645"	"10435"	"10435"	"10406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"415.1"	""	"429.1"	""	"420.6"	""	"511.6"	"1.1"	"573.0"	"558.4"	""	"675"	"57"	"35.000"	"28.000"	"7.21562205207003E-05"	""	"0"	"1.686E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGNTFFK"	"[K].nIGNTFFk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"699.90863"	"1398.80998"	"1398.81456"	"-3.27"	"-0.00229"	"7/70"	"7"	"70"	"4739867.81591797"	"HCD"	"MS2"	"0"	"339.8"	"100.000"	"46.3966"	"13373"	"13373"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"483.7"	""	"402.3"	""	"446.9"	""	"616.0"	"14.0"	"620.2"	"636.6"	""	"619"	"23"	"34.000"	"27.000"	"0.148136013573857"	"19"	"0.0005564"	"0.003434"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGNTFFK"	"[K].nIGNTFFk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"699.90894"	"1398.81059"	"1398.81456"	"-2.83"	"-0.00198"	"7/70"	"7"	"70"	"5175928.23272705"	"HCD"	"MS2"	"4.553766"	"366.6"	"100.000"	"46.7001"	"13545"	"13545"	"13522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"532.5"	""	"468.8"	""	"497.0"	""	"634.4"	"9.9"	"652.8"	"677.1"	""	"619"	"25"	"34.000"	"27.000"	"0.090294366083336"	"23"	"0.0005564"	"0.003461"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGNTFFK"	"[K].nIGNTFFk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"699.91046"	"1398.81365"	"1398.81456"	"-0.65"	"-0.00046"	"7/70"	"7"	"70"	"6008955.27709961"	"HCD"	"MS2"	"7.226574"	"509.9"	"100.000"	"46.7096"	"13501"	"13501"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"704.3"	""	"662.6"	""	"763.7"	""	"809.3"	"1.4"	"915.2"	"973.6"	""	"580"	"43"	"34.000"	"27.000"	"0.00151494894809745"	"25"	"0.0001889"	"0.0006124"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISLSDYK"	"[K].dISLSDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"3"	"699.91058"	"1398.81389"	"1398.78807"	"18.46"	"0.01291"	"7/66"	"7"	"66"	"2222909.72302246"	"HCD"	"MS2"	"24.28729"	"213.7"	"100.000"	"44.5068"	"12655"	"12655"	"12636"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"285.0"	""	"219.5"	""	"193.8"	""	"385.6"	"0.8"	"457.0"	"489.9"	""	"579"	"9"	"34.000"	"27.000"	"3.98702141244797"	"17"	"0.004758"	"0.1383"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGNTFFK"	"[K].nIGNTFFk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"699.91095"	"1398.81462"	"1398.81456"	"0.05"	"0.00003"	"7/70"	"7"	"70"	"5695925.01629639"	"HCD"	"MS2"	"11.82096"	"496.1"	"100.000"	"47.0079"	"13671"	"13671"	"13650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"704.0"	""	"653.8"	""	"738.1"	""	"795.7"	"6.9"	"880.8"	"919.0"	""	"578"	"43"	"34.000"	"27.000"	"0.00150625271509368"	"25"	"0.0001889"	"0.0008877"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGWLSLPVR"	"[R].lEGWLSLPVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"699.91779"	"1398.82829"	"1398.83065"	"-1.68"	"-0.00118"	"8/80"	"8"	"80"	"2381381.52630615"	"HCD"	"MS2"	"29.37258"	"123.9"	"100.000"	"71.1329"	"23489"	"23489"	"23466"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.1"	""	"176.9"	""	"180.2"	""	"201.8"	""	"212.5"	"235.9"	""	"513"	"21"	"34.000"	"27.000"	"0.215817853831992"	"21"	"0.0001889"	"0.000453"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGWLSLPVR"	"[R].lEGWLSLPVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"699.91852"	"1398.82976"	"1398.83065"	"-0.64"	"-0.00045"	"7/80"	"7"	"80"	"3153166.48779297"	"HCD"	"MS2"	"28.14505"	"151.7"	"100.000"	"71.2362"	"23479"	"23479"	"23459"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.1"	""	"208.3"	""	"212.8"	""	"242.8"	"0.7"	"272.0"	"280.4"	""	"491"	"44"	"33.000"	"26.000"	"0.00101403161738585"	"26"	"0"	"8.401E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLLIAGLQAR"	"[R].nTLLIAGLQAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"466.95901"	"1398.86249"	"1398.86301"	"-0.37"	"-0.00017"	"15/100"	"15"	"100"	"3042271.54400635"	"HCD"	"MS2"	"21.02995"	"93.5"	"100.000"	"49.2062"	"14523"	"14523"	"14495"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.8"	""	"106.9"	""	"134.9"	""	"157.5"	"0.7"	"184.3"	"203.0"	""	"291"	"31"	"31.000"	"24.000"	"0.0108358502203321"	"19"	"0"	"8.695E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLLIAGLQAR"	"[R].nTLLIAGLQAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"466.95901"	"1398.86249"	"1398.86301"	"-0.37"	"-0.00017"	"15/100"	"15"	"100"	"3568116.94970703"	"HCD"	"MS2"	"24.73561"	"102.4"	"100.000"	"49.4535"	"14668"	"14668"	"14638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.8"	""	"120.9"	""	"152.5"	""	"182.0"	""	"193.9"	"207.1"	""	"291"	"37"	"31.000"	"24.000"	"0.00281101390125962"	"19"	"0"	"7.577E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLLIAGLQAR"	"[R].nTLLIAGLQAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"699.93518"	"1398.86308"	"1398.86301"	"0.05"	"0.00004"	"8/100"	"8"	"100"	"4561529.15454102"	"HCD"	"MS2"	"10.67411"	"257.4"	"100.000"	"49.1581"	"14503"	"14503"	"14479"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.0"	""	"309.3"	""	"304.5"	""	"440.6"	"11.9"	"486.0"	"582.7"	""	"295"	"52"	"31.000"	"24.000"	"8.60581528803773E-05"	"23"	"0"	"2.3E-05"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELGFTSFIR"	"[R].tELGFTSFIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.39349"	"1399.77971"	"1399.77828"	"1.02"	"0.00071"	"8/84"	"8"	"84"	"793671.924499512"	"HCD"	"MS2"	"0"	"58.8"	"100.000"	"59.1030"	"18534"	"18534"	"18505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.2"	""	"100.6"	""	"92.6"	""	"86.1"	""	"100.1"	"95.9"	""	"745"	"24"	"35.000"	"28.000"	"0.152801028362511"	"14"	"0.0003839"	"0.002039"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGWLSVPNR"	"[R].iEGWLSVPNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"700.39862"	"1399.78996"	"1399.78952"	"0.32"	"0.00022"	"7/82"	"7"	"82"	"2974078.16564941"	"HCD"	"MS2"	"9.161006"	"175.1"	"100.000"	"56.1710"	"17394"	"17394"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.8"	""	"220.9"	""	"253.3"	""	"308.7"	""	"330.7"	"328.8"	""	"744"	"39"	"35.000"	"28.000"	"0.00455557226126598"	"18"	"0.0001308"	"0.0002414"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAFGAPLTK"	"[R].hAFGAPLTk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"467.28888"	"1399.85208"	"1399.84619"	"4.21"	"0.00196"	"11/64"	"11"	"64"	"11894275.7159424"	"HCD"	"MS2"	"37.70055"	"867.5"	"100.000"	"32.4279"	"7683"	"7683"	"7656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1063.3"	""	"1164.2"	""	"1199.7"	""	"1465.7"	""	"1680.4"	"1679.2"	""	"463"	"9"	"33.000"	"26.000"	"2.94815963255358"	"13"	"0.0006037"	"0.00518"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLITGATGLLGR"	"[R].vLITGATGLLGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"700.44531"	"1399.88335"	"1399.88342"	"-0.05"	"-0.00003"	"9/94"	"9"	"94"	"2952951.57244873"	"HCD"	"MS2"	"17.29023"	"142.5"	"100.000"	"59.3237"	"18623"	"18623"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.6"	""	"214.4"	""	"213.6"	""	"223.3"	""	"243.4"	"287.8"	""	"354"	"52"	"32.000"	"25.000"	"0.000113755725965112"	""	"0"	"4.011E-06"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLITGATGLLGR"	"[R].vLITGATGLLGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"700.44611"	"1399.88494"	"1399.88342"	"1.09"	"0.00076"	"10/94"	"10"	"94"	"2773813.6239624"	"HCD"	"MS2"	"7.589914"	"126.4"	"100.000"	"59.4383"	"18724"	"18724"	"18693"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.2"	""	"178.9"	""	"195.9"	""	"199.7"	"1.1"	"206.0"	"227.5"	""	"342"	"61"	"32.000"	"25.000"	"1.51006662971574E-05"	""	"0"	"7.63E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGPALLEK"	"[K].tLGPALLEk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"700.44897"	"1399.89067"	"1399.89247"	"-1.29"	"-0.00090"	"7/78"	"7"	"78"	"5413254.70373535"	"HCD"	"MS2"	"0"	"310.8"	"77.683"	"49.6824"	"14714"	"14714"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"497.5"	""	"221.8"	""	"224.4"	""	"175.0"	""	"239.3"	"1604.9"	""	"279"	"41"	"31.000"	"24.000"	"0.00103412778661478"	"22"	"0.0001308"	"0.0002714"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGPALLEK"	"[K].tLGPALLEk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"700.44958"	"1399.89189"	"1399.89247"	"-0.41"	"-0.00029"	"7/78"	"7"	"78"	"5979833.49090576"	"HCD"	"MS2"	"13.92661"	"446.7"	"100.000"	"49.9231"	"14859"	"14859"	"14830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"718.1"	""	"327.1"	""	"336.9"	""	"236.6"	""	"335.6"	"2300.2"	""	"282"	"41"	"31.000"	"24.000"	"0.00100743981976647"	"19"	"0.0001889"	"0.0004782"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVVGGGGVGK"	"[K].lVVVGGGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"467.30515"	"1399.90088"	"1399.90371"	"-2.02"	"-0.00094"	"8/82"	"8"	"82"	"8375322.3682251"	"HCD"	"MS2"	"19.65657"	"278.0"	"100.000"	"42.4596"	"11823"	"11823"	"11795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"265.1"	""	"436.4"	""	"399.2"	""	"457.5"	""	"522.6"	"558.3"	""	"252"	"54"	"31.000"	"24.000"	"5.35020650572354E-05"	"18"	"0"	"5.154E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVVGGGGVGK"	"[K].lVVVGGGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"467.30545"	"1399.90180"	"1399.90371"	"-1.36"	"-0.00064"	"8/82"	"8"	"82"	"6400286.7121582"	"HCD"	"MS2"	"6.02792"	"231.2"	"100.000"	"42.2349"	"11687"	"11687"	"11660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.2"	""	"367.9"	""	"339.4"	""	"372.9"	"2.0"	"458.2"	"458.4"	""	"248"	"34"	"30.000"	"23.000"	"0.00546288030748126"	"18"	"0"	"7.251E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVVGGGGVGK"	"[K].lVVVGGGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"0"	"2"	"2"	"0.9492"	"0.0000"	"1"	"1"	"1"	"700.45459"	"1399.90190"	"1399.90371"	"-1.29"	"-0.00090"	"10/82"	"10"	"82"	"8308513.42651367"	"HCD"	"MS2"	"0"	"462.0"	"100.000"	"42.1545"	"11654"	"11654"	"11631"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.7"	""	"767.8"	""	"674.9"	""	"742.6"	""	"853.4"	"914.7"	""	"248"	"59"	"30.000"	"23.000"	"1.44019628116203E-05"	"19"	"0"	"2.111E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLDVTPIR"	"[R].kLDVTPIR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"467.30560"	"1399.90226"	"1399.90371"	"-1.04"	"-0.00048"	"6/74"	"6"	"74"	"4518236.08862305"	"HCD"	"MS2"	"7.894525"	"228.5"	"71.854"	"34.4577"	"8546"	"8546"	"8522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"263.9"	""	"303.5"	""	"281.0"	""	"389.9"	""	"473.4"	"458.4"	""	"254"	"7"	"31.000"	"24.000"	"2.72147106342247"	"13"	"0.0004166"	"0.002263"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVVGGGGVGK"	"[K].lVVVGGGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"D3Z8L7"	"Ras-related protein R-Ras OS=Rattus norvegicus OX=10116 GN=Rras PE=1 SV=1"	"0"	"2"	"2"	"0.9483"	"0.0000"	"1"	"1"	"1"	"700.45526"	"1399.90325"	"1399.90371"	"-0.33"	"-0.00023"	"10/82"	"10"	"82"	"9315701.14556885"	"HCD"	"MS2"	"0"	"505.1"	"100.000"	"42.4115"	"11803"	"11803"	"11779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"477.4"	""	"859.1"	""	"720.9"	""	"785.7"	""	"960.1"	"988.8"	""	"242"	"58"	"30.000"	"23.000"	"1.78149812794359E-05"	"20"	"0"	"2.934E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQVLQWNR"	"[K].lDQVLQWNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"700.89557"	"1400.78386"	"1400.78476"	"-0.64"	"-0.00045"	"5/76"	"5"	"76"	"3481156.76550293"	"HCD"	"MS2"	"17.09288"	"192.1"	"100.000"	"57.7435"	"17982"	"17982"	"17963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.4"	""	"200.8"	""	"234.3"	""	"342.0"	"1.0"	"424.2"	"418.9"	""	"747"	"32"	"35.000"	"28.000"	"0.021295635569686"	"23"	"0.0001889"	"0.0007806"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQVLQWNR"	"[K].lDQVLQWNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"700.89667"	"1400.78606"	"1400.78476"	"0.92"	"0.00065"	"7/76"	"7"	"76"	"3609598.78326416"	"HCD"	"MS2"	"21.35578"	"185.7"	"100.000"	"57.9241"	"18110"	"18110"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.2"	""	"209.7"	""	"230.5"	""	"348.8"	""	"380.8"	"403.5"	""	"752"	"44"	"35.000"	"28.000"	"0.00158193212272551"	"21"	"0.0002277"	"0.001357"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"700.90161"	"1400.79595"	"1400.79466"	"0.92"	"0.00064"	"7/90"	"7"	"90"	"1133990.20196533"	"HCD"	"MS2"	"16.88327"	"86.4"	"100.000"	"39.1180"	"10459"	"10459"	"10430"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.9"	""	"87.1"	""	"98.1"	""	"220.5"	"3.9"	"172.5"	"135.8"	""	"765"	"10"	"35.000"	"28.000"	"4.1747592869165"	"18"	"0.002981"	"0.05498"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFDIYVK"	"[R].gTFDIYVk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"700.91296"	"1400.81865"	"1400.81897"	"-0.23"	"-0.00016"	"7/60"	"7"	"60"	"5693064.62139893"	"HCD"	"MS2"	"41.36013"	"444.7"	"83.159"	"49.5617"	"14712"	"14712"	"14686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"701.8"	""	"617.6"	""	"641.0"	""	"642.4"	""	"777.5"	"832.8"	""	"796"	"41"	"35.000"	"29.000"	"0.0034824354254052"	"20"	"0.0002277"	"0.001342"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGQVAAANK"	"[R].iAGQVAAANk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"700.93427"	"1400.86125"	"1400.86257"	"-0.94"	"-0.00066"	"9/86"	"9"	"86"	"1573723.40362549"	"HCD"	"MS2"	"0"	"126.0"	"100.000"	"32.6312"	"7809"	"7809"	"7782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.5"	""	"183.5"	""	"209.2"	""	"236.5"	""	"212.0"	"168.9"	""	"507"	"54"	"34.000"	"27.000"	"9.44012975355331E-05"	"20"	"0"	"2.619E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGQVAAANK"	"[R].iAGQVAAANk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.9649"	"0.0000"	"1"	"1"	"1"	"700.93439"	"1400.86150"	"1400.86257"	"-0.77"	"-0.00054"	"9/86"	"9"	"86"	"1516407.17016602"	"HCD"	"MS2"	"0"	"112.8"	"100.000"	"32.5427"	"7730"	"7730"	"7704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"179.2"	""	"172.6"	""	"186.0"	""	"196.4"	"0.5"	"187.7"	"143.0"	""	"507"	"57"	"34.000"	"27.000"	"5.18773715409704E-05"	"18"	"0"	"1.733E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVPALTSK"	"[R].nIVPALTSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"700.94647"	"1400.88567"	"1400.88772"	"-1.47"	"-0.00103"	"7/82"	"7"	"82"	"2089147.14501953"	"HCD"	"MS2"	"0"	"147.5"	"100.000"	"43.0583"	"12020"	"12020"	"12010"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.7"	""	"195.5"	""	"216.6"	""	"217.1"	"1.5"	"268.2"	"288.7"	""	"346"	"39"	"32.000"	"25.000"	"0.00202789798239827"	"23"	"0.0001308"	"0.0002339"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAIAGQLK"	"[K].lEAIAGQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"467.63403"	"1400.88755"	"1400.88772"	"-0.13"	"-0.00006"	"7/68"	"7"	"68"	"7171994.28222656"	"HCD"	"MS2"	"7.104789"	"236.5"	"100.000"	"51.5479"	"15521"	"15521"	"15494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"218.7"	""	"228.9"	""	"248.1"	""	"508.8"	""	"521.6"	"524.2"	""	"350"	"38"	"32.000"	"25.000"	"0.00289759743607167"	""	"0.0001889"	"0.001088"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAIAGQLK"	"[K].lEAIAGQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.5952"	"0.0000"	"1"	"1"	"1"	"467.63406"	"1400.88764"	"1400.88772"	"-0.06"	"-0.00003"	"7/68"	"7"	"68"	"7582187.85308838"	"HCD"	"MS2"	"8.663956"	"247.0"	"100.000"	"51.3802"	"15402"	"15402"	"15378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.8"	""	"242.1"	""	"252.4"	""	"509.0"	""	"569.3"	"559.2"	""	"350"	"42"	"32.000"	"25.000"	"0.00100470380886282"	""	"0.0001889"	"0.0009589"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAIAGQLK"	"[K].lEAIAGQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5349"	"0.0000"	"1"	"1"	"1"	"700.94891"	"1400.89055"	"1400.88772"	"2.02"	"0.00141"	"14/68"	"14"	"68"	"4801053.97253418"	"HCD"	"MS2"	"21.94606"	"360.5"	"100.000"	"51.5433"	"15519"	"15519"	"15494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"349.0"	""	"348.1"	""	"392.6"	""	"738.4"	"2.2"	"795.2"	"804.6"	""	"331"	"43"	"32.000"	"25.000"	"0.000844885774959298"	""	"0.0001308"	"0.0002514"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAIAGQLK"	"[K].lEAIAGQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5111"	"0.0000"	"1"	"1"	"1"	"700.94910"	"1400.89092"	"1400.88772"	"2.28"	"0.00160"	"14/68"	"14"	"68"	"4633847.49975586"	"HCD"	"MS2"	"16.77499"	"354.3"	"100.000"	"51.3547"	"15392"	"15392"	"15362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"352.6"	""	"343.2"	""	"378.0"	""	"720.1"	"0.6"	"799.8"	"777.1"	""	"311"	"45"	"31.000"	"24.000"	"0.000541664524880999"	""	"0.0001308"	"0.0002708"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLEDLVK"	"[R].lLLEDLVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"700.95929"	"1400.91130"	"1400.91287"	"-1.12"	"-0.00079"	"14/58"	"14"	"58"	"2368852.8973999"	"HCD"	"MS2"	"0"	"158.9"	"100.000"	"70.6466"	"23291"	"23291"	"23274"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.3"	""	"184.1"	""	"226.0"	""	"272.4"	"0.5"	"272.4"	"328.1"	""	"232"	"44"	"30.000"	"23.000"	"0.000467151759817532"	""	"0.0001859"	"0.0003639"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLEDLVK"	"[R].lLLEDLVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"700.95978"	"1400.91228"	"1400.91287"	"-0.42"	"-0.00030"	"14/58"	"14"	"58"	"2281375.85797119"	"HCD"	"MS2"	"9.061302"	"156.9"	"100.000"	"70.7287"	"23272"	"23272"	"23251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"214.2"	""	"183.3"	""	"233.4"	""	"252.0"	""	"274.8"	"330.3"	""	"233"	"46"	"30.000"	"23.000"	"0.00030926154797015"	""	"0.0001859"	"0.0003198"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLLLLLK"	"[K].eTLLLLLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"700.97644"	"1400.94560"	"1400.94926"	"-2.61"	"-0.00183"	"14/58"	"14"	"58"	"1620709.57611084"	"HCD"	"MS2"	"0"	"120.4"	"100.000"	"76.6586"	"25686"	"25686"	"25673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.7"	""	"175.8"	""	"191.6"	""	"209.0"	""	"210.8"	"188.2"	""	"124"	"45"	"27.000"	"20.000"	"0.000209600198447709"	""	"0.0001308"	"0.0003092"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLLLLLK"	"[K].eTLLLLLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"700.97675"	"1400.94621"	"1400.94926"	"-2.17"	"-0.00152"	"14/58"	"14"	"58"	"1202965.75946045"	"HCD"	"MS2"	"0"	"88.2"	"100.000"	"76.5929"	"25710"	"25710"	"25703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.4"	""	"133.7"	""	"137.2"	""	"150.2"	"1.6"	"137.9"	"145.0"	""	"124"	"45"	"27.000"	"20.000"	"0.000210567669006053"	""	"0.0001308"	"0.0002351"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLLLLLK"	"[K].eTLLLLLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"700.97766"	"1400.94805"	"1400.94926"	"-0.87"	"-0.00061"	"7/58"	"7"	"58"	"1615699.20800781"	"HCD"	"MS2"	"0"	"92.4"	"100.000"	"76.8956"	"25830"	"25830"	"25815"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.1"	""	"122.7"	""	"148.2"	""	"150.8"	""	"159.8"	"166.9"	""	"124"	"41"	"27.000"	"20.000"	"0.000492483505529055"	""	"0.0001889"	"0.0006388"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLLLLLK"	"[K].eTLLLLLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"700.97809"	"1400.94890"	"1400.94926"	"-0.26"	"-0.00018"	"7/58"	"7"	"58"	"1356743.3661499"	"HCD"	"MS2"	"0"	"77.8"	"100.000"	"76.9566"	"25803"	"25803"	"25789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.5"	""	"117.8"	""	"133.7"	""	"111.9"	""	"127.1"	"145.6"	""	"124"	"29"	"27.000"	"20.000"	"0.00838284989180452"	""	"0.0001889"	"0.0004332"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.33606"	"1401.66484"	"1401.66702"	"-1.55"	"-0.00109"	"9/80"	"9"	"80"	"2841489.06060791"	"HCD"	"MS2"	"100"	"200.2"	"100.000"	"42.0515"	"11612"	"11612"	"11591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"258.5"	""	"245.0"	""	"258.6"	""	"354.5"	""	"402.3"	"381.8"	""	"353"	"15"	"32.000"	"25.000"	"0.626245631997261"	"13"	"0.0001889"	"0.0004276"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.33679"	"1401.66631"	"1401.66702"	"-0.51"	"-0.00035"	"9/80"	"9"	"80"	"2747053.10540771"	"HCD"	"MS2"	"0"	"162.4"	"100.000"	"42.2763"	"11748"	"11748"	"11731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.3"	""	"211.5"	""	"226.6"	""	"229.6"	"2.0"	"319.9"	"298.9"	""	"359"	"24"	"32.000"	"25.000"	"0.0708050857225125"	"14"	"0.0001889"	"0.0004364"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"701.38678"	"1401.76628"	"1401.76660"	"-0.23"	"-0.00016"	"12/54"	"12"	"54"	"1789110.24468994"	"HCD"	"MS2"	"0"	"182.5"	"100.000"	"40.6851"	"11055"	"11055"	"11029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.4"	""	"243.2"	""	"258.2"	""	"269.1"	""	"335.8"	"372.2"	""	"829"	"29"	"36.000"	"29.000"	"0.0563020923610375"	"22"	"0.0003146"	"0.001466"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"701.38702"	"1401.76677"	"1401.76660"	"0.12"	"0.00008"	"12/54"	"12"	"54"	"1364824.3260498"	"HCD"	"MS2"	"0"	"144.6"	"100.000"	"40.8779"	"11178"	"11178"	"11149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.1"	""	"191.0"	""	"207.9"	""	"222.0"	"0.4"	"272.1"	"283.3"	""	"839"	"28"	"36.000"	"29.000"	"0.0596666926198023"	"22"	"0.0002277"	"0.001201"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTSGPPK"	"[R].kTSGPPk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"467.97192"	"1401.90122"	"1401.90326"	"-1.46"	"-0.00068"	"6/62"	"6"	"62"	"53209671.6929932"	"HCD"	"MS2"	"10.46627"	"1489.5"	"42.982"	"23.9720"	"4280"	"4280"	"4263"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1371.5"	""	"1600.3"	""	"1555.5"	""	"4240.9"	""	"3247.5"	"2204.5"	""	"309"	"11"	"31.000"	"24.000"	"1.31500826902267"	"13"	"0.0009727"	"0.01036"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTSGPPK"	"[R].kTSGPPk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"1"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"701.45447"	"1401.90166"	"1401.90326"	"-1.14"	"-0.00080"	"6/62"	"6"	"62"	"1674955.28613281"	"HCD"	"MS2"	"0"	"115.3"	"100.000"	"24.0016"	"4292"	"4292"	"4263"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.2"	""	"121.7"	""	"112.9"	""	"345.8"	"2.8"	"243.5"	"163.9"	""	"309"	"28"	"31.000"	"24.000"	"0.0249418397029692"	"22"	"0.001966"	"0.02887"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTSGPPK"	"[R].kTSGPPk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"467.97214"	"1401.90186"	"1401.90326"	"-1.00"	"-0.00047"	"6/62"	"6"	"62"	"33429681.34198"	"HCD"	"MS2"	"18.22373"	"2384.4"	"100.000"	"23.9916"	"4321"	"4321"	"4302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2241.7"	""	"2606.1"	""	"2519.5"	""	"6762.2"	""	"5153.3"	"3474.6"	""	"309"	"10"	"31.000"	"24.000"	"1.53436429481034"	"13"	"0.0006037"	"0.004809"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTSGPPK"	"[R].kTSGPPk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"P36201"	"Cysteine-rich protein 2 OS=Rattus norvegicus OX=10116 GN=Crip2 PE=2 SV=1"	"1"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"701.45483"	"1401.90239"	"1401.90326"	"-0.62"	"-0.00043"	"6/62"	"6"	"62"	"1461261.26397705"	"HCD"	"MS2"	"0"	"101.8"	"100.000"	"24.0467"	"4344"	"4344"	"4318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.3"	""	"107.5"	""	"111.2"	""	"292.1"	""	"208.6"	"157.7"	""	"292"	"29"	"31.000"	"24.000"	"0.0195592796364186"	"22"	"0.001454"	"0.02008"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVVDIGLIK"	"[R].sVVDIGLIk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"701.45740"	"1401.90752"	"1401.90812"	"-0.43"	"-0.00030"	"8/70"	"8"	"70"	"12651738.6899414"	"HCD"	"MS2"	"47.71902"	"751.8"	"100.000"	"56.8184"	"17658"	"17658"	"17637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1242.6"	""	"942.5"	""	"743.9"	""	"1764.4"	"6.6"	"1273.8"	"1138.5"	""	"301"	"58"	"31.000"	"24.000"	"2.363396020522E-05"	""	"0.0001308"	"0.0002269"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVVDIGLIK"	"[R].sVVDIGLIk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"701.45801"	"1401.90874"	"1401.90812"	"0.44"	"0.00031"	"14/70"	"14"	"70"	"11849256.7850952"	"HCD"	"MS2"	"49.79418"	"685.1"	"100.000"	"56.6157"	"17521"	"17521"	"17499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1090.4"	""	"836.7"	""	"670.6"	""	"1639.9"	"0.1"	"1180.8"	"1065.2"	""	"300"	"50"	"31.000"	"24.000"	"0.00015670803288312"	""	"0.0001889"	"0.0004176"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIFSFYLNR"	"[K].nIFSFYLNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"468.26025"	"1402.76621"	"1402.76805"	"-1.31"	"-0.00061"	"9/80"	"9"	"80"	"801985.411560059"	"HCD"	"MS2"	"17.15238"	"21.0"	"100.000"	"66.4754"	"21597"	"21597"	"21571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.0"	""	"27.5"	""	"26.7"	""	"27.3"	""	"49.0"	"41.3"	""	"943"	"31"	"36.000"	"29.000"	"0.0347121646468769"	"17"	"0.0001889"	"0.0006107"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIFSFYLNR"	"[K].nIFSFYLNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"701.88745"	"1402.76763"	"1402.76805"	"-0.30"	"-0.00021"	"7/80"	"7"	"80"	"6964643.14904785"	"HCD"	"MS2"	"8.14933"	"343.9"	"100.000"	"66.2607"	"21509"	"21509"	"21491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"560.2"	""	"536.2"	""	"605.6"	""	"532.6"	"3.8"	"474.0"	"533.0"	""	"929"	"44"	"36.000"	"29.000"	"0.00187062062444176"	"24"	"0.0001859"	"0.0003467"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIFSFYLNR"	"[K].nIFSFYLNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"701.88770"	"1402.76811"	"1402.76805"	"0.04"	"0.00003"	"7/80"	"7"	"80"	"6219891.11474609"	"HCD"	"MS2"	"9.109732"	"304.2"	"100.000"	"66.3216"	"21482"	"21482"	"21465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"494.4"	""	"470.3"	""	"515.0"	""	"468.3"	"0.8"	"430.5"	"492.5"	""	"915"	"46"	"36.000"	"29.000"	"0.0010899111572316"	"24"	"0.0001308"	"0.0002376"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFMQEFK"	"[K].vFmQEFk.[E]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"701.89197"	"1402.77666"	"1402.78048"	"-2.72"	"-0.00191"	"10/54"	"10"	"54"	"3592311.39459229"	"HCD"	"MS2"	"0"	"265.7"	"100.000"	"41.9461"	"11570"	"11570"	"11557"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.1"	""	"284.7"	""	"297.5"	""	"661.9"	"2.3"	"472.3"	"490.2"	""	"985"	"20"	"36.000"	"29.000"	"0.532606221014235"	"21"	"0.0006737"	"0.006707"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFMQEFK"	"[K].vFmQEFk.[E]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"701.89246"	"1402.77764"	"1402.78048"	"-2.03"	"-0.00142"	"10/54"	"10"	"54"	"3453972.71508789"	"HCD"	"MS2"	"0"	"246.9"	"100.000"	"42.1688"	"11705"	"11705"	"11696"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.1"	""	"256.0"	""	"281.7"	""	"625.8"	""	"456.0"	"445.1"	""	"976"	"21"	"36.000"	"29.000"	"0.379681836907424"	"23"	"0.002953"	"0.05293"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].dFDALLINPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"701.89740"	"1402.78752"	"1402.78918"	"-1.18"	"-0.00083"	"8/80"	"8"	"80"	"4628260.52801514"	"HCD"	"MS2"	"0"	"216.7"	"100.000"	"58.8986"	"18504"	"18504"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.1"	""	"279.1"	""	"274.2"	""	"353.7"	""	"431.8"	"425.7"	""	"1037"	"30"	"37.000"	"30.000"	"0.0576432900595505"	"21"	"0"	"0.0001566"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].dFDALLINPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"468.26736"	"1402.78754"	"1402.78918"	"-1.17"	"-0.00055"	"11/80"	"11"	"80"	"1650103.33428955"	"HCD"	"MS2"	"15.21813"	"49.0"	"100.000"	"59.0034"	"18547"	"18547"	"18517"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.6"	""	"76.6"	""	"70.0"	""	"67.9"	"1.3"	"83.9"	"98.8"	""	"1037"	"29"	"37.000"	"30.000"	"0.0683516118941497"	"17"	"0.0001859"	"0.0003234"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDWDALLAR"	"[R].tLDWDALLAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"701.89838"	"1402.78948"	"1402.78918"	"0.21"	"0.00015"	"9/80"	"9"	"80"	"4107322.53448486"	"HCD"	"MS2"	"58.61081"	"167.1"	"100.000"	"69.7547"	"22875"	"22875"	"22858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"242.5"	""	"225.4"	""	"252.9"	""	"254.1"	"0.7"	"294.5"	"312.7"	""	"1002"	"16"	"36.000"	"30.000"	"1.36721786918683"	"20"	"0"	"0.0001161"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].dFDALLINPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"701.89850"	"1402.78972"	"1402.78918"	"0.38"	"0.00027"	"8/80"	"8"	"80"	"4349799.45617676"	"HCD"	"MS2"	"13.3165"	"209.9"	"100.000"	"58.7529"	"18395"	"18395"	"18377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.1"	""	"260.5"	""	"260.5"	""	"332.6"	"2.6"	"406.1"	"430.8"	""	"1007"	"27"	"37.000"	"30.000"	"0.0899496493938007"	"19"	"0"	"0.0001302"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFLAAVTANR"	"[K].nPFLAAVTANR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"468.27042"	"1402.79670"	"1402.80041"	"-2.65"	"-0.00124"	"12/100"	"12"	"100"	"6422441.11749268"	"HCD"	"MS2"	"53.10765"	"115.2"	"100.000"	"50.1889"	"14967"	"14967"	"14942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.1"	""	"169.2"	""	"171.0"	""	"179.4"	""	"207.3"	"205.1"	""	"992"	"39"	"36.000"	"29.000"	"0.00634573126862133"	"25"	"0"	"6.851E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFLAAVTANR"	"[K].nPFLAAVTANR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"701.90204"	"1402.79680"	"1402.80041"	"-2.58"	"-0.00181"	"6/100"	"6"	"100"	"5352616.949646"	"HCD"	"MS2"	"0"	"344.5"	"100.000"	"50.0675"	"14918"	"14918"	"14894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"496.4"	""	"484.7"	""	"502.5"	""	"527.6"	""	"589.8"	"662.6"	""	"991"	"29"	"36.000"	"29.000"	"0.0633933436210053"	"23"	"0"	"0.0001145"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFLAAVTANR"	"[K].nPFLAAVTANR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"701.90265"	"1402.79802"	"1402.80041"	"-1.71"	"-0.00120"	"8/100"	"8"	"100"	"5044285.25115967"	"HCD"	"MS2"	"100"	"327.7"	"100.000"	"49.8247"	"14772"	"14772"	"14751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.2"	""	"460.0"	""	"477.5"	""	"532.6"	""	"605.3"	"567.7"	""	"1003"	"20"	"37.000"	"30.000"	"0.487832732724148"	"17"	"0.0001859"	"0.0003662"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFLAAVTANR"	"[K].nPFLAAVTANR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"468.27094"	"1402.79825"	"1402.80041"	"-1.54"	"-0.00072"	"11/100"	"11"	"100"	"6676942.29693604"	"HCD"	"MS2"	"0"	"140.9"	"100.000"	"49.9883"	"14837"	"14837"	"14819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.5"	""	"177.3"	""	"191.4"	""	"253.2"	""	"267.3"	"250.6"	""	"1001"	"35"	"36.000"	"30.000"	"0.0153604550518977"	"23"	"0"	"0.0001107"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLWESGSLLR"	"[R].lLWESGSLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"701.91583"	"1402.82439"	"1402.82557"	"-0.84"	"-0.00059"	"8/78"	"8"	"78"	"9554273.12017822"	"HCD"	"MS2"	"2.063149"	"233.2"	"60.602"	"65.4765"	"21189"	"21189"	"21171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"472.3"	""	"344.6"	""	"246.8"	""	"413.8"	""	"327.8"	"398.9"	""	"852"	"48"	"36.000"	"29.000"	"0.000716819150016019"	"25"	"0"	"0.0001835"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLWESGSLLR"	"[R].lLWESGSLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"701.91595"	"1402.82463"	"1402.82557"	"-0.67"	"-0.00047"	"13/78"	"13"	"78"	"10304511.1796265"	"HCD"	"MS2"	"1.073453"	"296.0"	"69.908"	"65.4986"	"21146"	"21146"	"21129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"579.0"	""	"445.3"	""	"322.4"	""	"524.4"	""	"414.3"	"510.8"	""	"818"	"49"	"36.000"	"29.000"	"0.00054415585695304"	"26"	"0"	"0.0001837"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLWESGSLLR"	"[R].lLWESGSLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"701.91595"	"1402.82463"	"1402.82557"	"-0.67"	"-0.00047"	"8/78"	"8"	"78"	"10441525.8621826"	"HCD"	"MS2"	"1.266117"	"406.9"	"100.000"	"65.1631"	"21061"	"21061"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"824.8"	""	"638.7"	""	"434.3"	""	"719.6"	"1.8"	"559.5"	"662.7"	""	"818"	"49"	"36.000"	"29.000"	"0.000519664809030293"	"26"	"7.476E-05"	"0.0001853"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLWESGSLLR"	"[R].lLWESGSLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"468.27982"	"1402.82489"	"1402.82557"	"-0.48"	"-0.00022"	"11/78"	"11"	"78"	"1977851.08172607"	"HCD"	"MS2"	"30.83384"	"30.3"	"100.000"	"65.3338"	"21131"	"21131"	"21107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.6"	""	"44.3"	""	"41.0"	""	"47.9"	""	"46.6"	"59.5"	""	"821"	"37"	"36.000"	"29.000"	"0.00755636906603006"	"23"	"0.0001859"	"0.0003569"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLWESGSLLR"	"[R].lLWESGSLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"468.27988"	"1402.82508"	"1402.82557"	"-0.35"	"-0.00016"	"11/78"	"11"	"78"	"1761981.38616943"	"HCD"	"MS2"	"33.62297"	"31.9"	"100.000"	"65.3348"	"21079"	"21079"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.1"	""	"52.3"	""	"39.9"	""	"50.4"	""	"58.4"	"54.9"	""	"861"	"36"	"36.000"	"29.000"	"0.0118842876710286"	"22"	"0.0001889"	"0.0005588"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLWESGSLLR"	"[R].lLWESGSLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"701.91669"	"1402.82610"	"1402.82557"	"0.38"	"0.00027"	"8/78"	"8"	"78"	"10154456.4606934"	"HCD"	"MS2"	"3.221845"	"419.9"	"100.000"	"65.1920"	"21020"	"21020"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"825.0"	""	"651.4"	""	"440.5"	""	"757.3"	""	"624.7"	"668.5"	""	"859"	"49"	"36.000"	"29.000"	"0.000557138496887609"	"26"	"0"	"0.0001002"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIPFFVK"	"[R].hGIPFFVk.[IV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.29056"	"1402.85712"	"1402.86111"	"-2.85"	"-0.00133"	"10/58"	"10"	"58"	"54018264.6500244"	"HCD"	"MS2"	"6.459291"	"891.6"	"46.896"	"43.3392"	"12129"	"12129"	"12117"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1779.6"	""	"1673.9"	""	"1287.3"	""	"1638.0"	""	"907.7"	"1109.8"	""	"712"	"30"	"35.000"	"28.000"	"0.0326174494483432"	"14"	"0.0003839"	"0.001656"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIPFFVK"	"[R].hGIPFFVk.[IV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.29092"	"1402.85822"	"1402.86111"	"-2.06"	"-0.00096"	"10/58"	"10"	"58"	"110197138.838379"	"HCD"	"MS2"	"5.755202"	"853.6"	"20.538"	"43.6079"	"12288"	"12288"	"12273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1717.3"	""	"1639.1"	""	"1220.2"	""	"1589.0"	""	"840.3"	"1025.4"	""	"714"	"32"	"35.000"	"28.000"	"0.0241918018217011"	"14"	"0.0002277"	"0.001219"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIPFFVK"	"[R].hGIPFFVk.[IV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.29117"	"1402.85895"	"1402.86111"	"-1.54"	"-0.00072"	"10/58"	"10"	"58"	"64367253.1499023"	"HCD"	"MS2"	"4.084036"	"443.8"	"18.452"	"43.9490"	"12377"	"12377"	"12358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"895.1"	""	"827.9"	""	"638.1"	""	"779.2"	""	"438.3"	"599.2"	""	"681"	"37"	"35.000"	"28.000"	"0.0071468903037381"	"15"	"0.0001889"	"0.0008654"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIPFFVK"	"[R].hGIPFFVk.[IV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.29132"	"1402.85941"	"1402.86111"	"-1.21"	"-0.00057"	"10/58"	"10"	"58"	"95778643.2055664"	"HCD"	"MS2"	"3.66878"	"415.9"	"10.883"	"43.6418"	"12252"	"12252"	"12237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"854.5"	""	"782.6"	""	"587.9"	""	"760.3"	""	"398.4"	"529.8"	""	"682"	"32"	"35.000"	"28.000"	"0.0224261322538198"	"14"	"0.000523"	"0.003216"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIPFFVK"	"[R].hGIPFFVk.[IV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.29135"	"1402.85950"	"1402.86111"	"-1.15"	"-0.00054"	"10/58"	"10"	"58"	"21904565.8165283"	"HCD"	"MS2"	"27.93095"	"812.4"	"100.000"	"44.5251"	"12662"	"12662"	"12652"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1405.7"	""	"1360.3"	""	"1164.5"	""	"1401.7"	"21.9"	"1051.8"	"1259.5"	""	"682"	"22"	"35.000"	"28.000"	"0.233751485220357"	"14"	"0.0003839"	"0.001801"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIPFFVK"	"[R].hGIPFFVk.[IV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.29138"	"1402.85959"	"1402.86111"	"-1.08"	"-0.00051"	"10/58"	"10"	"58"	"85507712.7971191"	"HCD"	"MS2"	"3.074028"	"435.1"	"13.514"	"43.9284"	"12418"	"12418"	"12400"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"876.3"	""	"807.9"	""	"653.9"	""	"769.2"	""	"428.8"	"557.3"	""	"680"	"30"	"35.000"	"28.000"	"0.0306534186786025"	"14"	"0.0001889"	"0.001028"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIPFFVK"	"[R].hGIPFFVk.[IV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.29144"	"1402.85978"	"1402.86111"	"-0.95"	"-0.00045"	"10/58"	"10"	"58"	"25066869.8010254"	"HCD"	"MS2"	"17.01428"	"417.9"	"42.613"	"44.2613"	"12505"	"12505"	"12486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"742.4"	""	"733.4"	""	"605.4"	""	"722.7"	"9.6"	"527.8"	"599.1"	""	"680"	"24"	"35.000"	"28.000"	"0.14944414924886"	"14"	"0.0004166"	"0.002402"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIPFFVK"	"[R].hGIPFFVk.[IV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.29160"	"1402.86023"	"1402.86111"	"-0.63"	"-0.00029"	"10/58"	"10"	"58"	"53549835.9951172"	"HCD"	"MS2"	"3.711733"	"504.5"	"25.943"	"44.2334"	"12543"	"12543"	"12524"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1036.1"	""	"935.9"	""	"731.6"	""	"891.7"	""	"504.1"	"651.7"	""	"677"	"33"	"35.000"	"28.000"	"0.0155796850157289"	"15"	"0.0001889"	"0.0007161"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIPFFVK"	"[R].hGIPFFVk.[IV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.93390"	"1402.86052"	"1402.86111"	"-0.42"	"-0.00030"	"8/58"	"8"	"58"	"2734985.05102539"	"HCD"	"MS2"	"18.32907"	"236.6"	"100.000"	"44.0453"	"12466"	"12466"	"12447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"417.3"	""	"360.3"	""	"338.3"	""	"425.6"	""	"329.5"	"362.8"	""	"677"	"33"	"35.000"	"28.000"	"0.018346730140095"	"15"	"0.0005564"	"0.003564"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIPFFVK"	"[R].hGIPFFVk.[IV]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.93390"	"1402.86052"	"1402.86111"	"-0.42"	"-0.00030"	"8/58"	"8"	"58"	"4930988.75531006"	"HCD"	"MS2"	"0"	"387.8"	"100.000"	"43.7085"	"12329"	"12329"	"12302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"765.5"	""	"687.6"	""	"586.6"	""	"654.8"	"9.3"	"432.3"	"515.8"	""	"677"	"36"	"35.000"	"28.000"	"0.00834754315653824"	"15"	"0.0001889"	"0.0005682"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVLGSSLK"	"[K].gALVLGSSLk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08730"	"Glycogenin-1 OS=Rattus norvegicus OX=10116 GN=Gyg1 PE=2 SV=4"	"O08730"	"Glycogenin-1 OS=Rattus norvegicus OX=10116 GN=Gyg1 PE=2 SV=4"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"468.30521"	"1402.90107"	"1402.90337"	"-1.64"	"-0.00077"	"12/74"	"12"	"74"	"5314004.8225708"	"HCD"	"MS2"	"28.53329"	"186.3"	"100.000"	"46.8798"	"13571"	"13571"	"13544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"284.9"	""	"250.4"	""	"259.2"	""	"288.4"	"1.8"	"324.2"	"355.4"	""	"347"	"49"	"32.000"	"25.000"	"0.00024171270531101"	"22"	"0"	"8.909E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVLGSSLK"	"[K].gALVLGSSLk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08730"	"Glycogenin-1 OS=Rattus norvegicus OX=10116 GN=Gyg1 PE=2 SV=4"	"O08730"	"Glycogenin-1 OS=Rattus norvegicus OX=10116 GN=Gyg1 PE=2 SV=4"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"468.30563"	"1402.90235"	"1402.90337"	"-0.73"	"-0.00034"	"13/74"	"13"	"74"	"4875155.60449219"	"HCD"	"MS2"	"17.26586"	"168.5"	"100.000"	"47.1367"	"13724"	"13724"	"13698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.2"	""	"231.9"	""	"246.0"	""	"277.0"	""	"303.5"	"307.1"	""	"334"	"50"	"32.000"	"25.000"	"0.000161702401995629"	"22"	"0"	"9.182E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPITYLELLN"	"[K].vPITYLELLN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"702.41986"	"1403.83245"	"1403.83473"	"-1.63"	"-0.00114"	"6/78"	"6"	"78"	"121045.297790527"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"91.9249"	"31738"	"31738"	"31731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.5"	""	"2.3"	""	"1.8"	""	"4.4"	""	"4.7"	"8.4"	""	"921"	"44"	"36.000"	"29.000"	"0.00167969192559242"	"23"	"0.0004166"	"0.002399"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPITYLELLN"	"[K].vPITYLELLN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"702.42041"	"1403.83354"	"1403.83473"	"-0.85"	"-0.00060"	"7/78"	"7"	"78"	"593093.38269043"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"92.1883"	"31828"	"31828"	"31824"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.9"	""	"5.4"	""	"6.0"	""	"8.1"	""	"9.1"	"4.9"	""	"930"	"48"	"36.000"	"29.000"	"0.000745509106670869"	"25"	"0.0002723"	"0.001371"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPITYLELLN"	"[K].vPITYLELLN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"702.42065"	"1403.83403"	"1403.83473"	"-0.50"	"-0.00035"	"6/78"	"6"	"78"	"107039.986877441"	"HCD"	"MS2"	"6.333847"	"2.9"	"100.000"	"92.4415"	"31914"	"31914"	"31909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.5"	""	"2.3"	""	"5.5"	""	"6.2"	""	"4.4"	"6.5"	""	"845"	"38"	"36.000"	"29.000"	"0.00616349024966334"	"23"	"0.0003839"	"0.001994"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPITYLELLN"	"[K].vPITYLELLN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"702.42108"	"1403.83489"	"1403.83473"	"0.11"	"0.00008"	"8/78"	"8"	"78"	"579084.276000977"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"92.0601"	"31761"	"31761"	"31754"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"5.5"	""	"9.3"	""	"12.6"	""	"8.9"	"8.5"	""	"912"	"51"	"36.000"	"29.000"	"0.000374942648375864"	"27"	"0.0001889"	"0.0005079"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNQGTER"	"[R].kLNQGTER.[H]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.61649"	"1403.83490"	"1403.83708"	"-1.55"	"-0.00073"	"7/72"	"7"	"72"	"1417701.38562012"	"HCD"	"MS2"	"18.66334"	"117.6"	"100.000"	"22.0948"	"3547"	"3547"	"3526"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.1"	""	"170.2"	""	"168.4"	""	"171.7"	""	"221.0"	"211.2"	""	"912"	"9"	"36.000"	"29.000"	"5.43206355660482"	"13"	"0.0006037"	"0.004607"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPITYLELLN"	"[K].vPITYLELLN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"702.42139"	"1403.83550"	"1403.83473"	"0.54"	"0.00038"	"6/78"	"6"	"78"	"126150.331726074"	"HCD"	"MS2"	"10.16044"	"3.6"	"100.000"	"91.8023"	"31670"	"31670"	"31661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	"3.8"	""	"4.3"	""	"4.6"	""	"9.3"	"7.1"	""	"903"	"38"	"36.000"	"29.000"	"0.00781012086185618"	"22"	"0.0007076"	"0.006921"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAMNVGK"	"[R].vNLAMNVGk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.7027"	"0.0000"	"1"	"1"	"1"	"468.61890"	"1403.84214"	"1403.84448"	"-1.67"	"-0.00078"	"6/80"	"6"	"80"	"10489244.895813"	"HCD"	"MS2"	"12.15311"	"251.3"	"62.001"	"42.9642"	"12030"	"12030"	"12003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"415.0"	""	"395.1"	""	"389.3"	""	"254.4"	""	"431.0"	"497.1"	""	"841"	"37"	"36.000"	"29.000"	"0.00792074442130461"	"26"	"0.0001889"	"0.001064"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAMNVGK"	"[R].vNLAMNVGk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8246"	"0.0000"	"1"	"1"	"1"	"702.42487"	"1403.84245"	"1403.84448"	"-1.44"	"-0.00101"	"8/80"	"8"	"80"	"38136652.5852051"	"HCD"	"MS2"	"0"	"968.9"	"34.928"	"42.6508"	"11857"	"11857"	"11836"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1751.1"	""	"1484.9"	""	"1567.1"	""	"925.2"	""	"1574.6"	"1862.7"	""	"839"	"57"	"36.000"	"29.000"	"7.93838148021569E-05"	"26"	"0.0001889"	"0.0003951"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAMNVGK"	"[R].vNLAMNVGk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"468.61920"	"1403.84305"	"1403.84448"	"-1.02"	"-0.00047"	"6/80"	"6"	"80"	"7424445.26849365"	"HCD"	"MS2"	"23.10688"	"299.7"	"100.000"	"42.6988"	"11877"	"11877"	"11852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"480.4"	""	"453.1"	""	"450.8"	""	"326.4"	"0.4"	"525.5"	"601.4"	""	"799"	"35"	"36.000"	"29.000"	"0.0117900808605322"	"25"	"0.0001889"	"0.0005364"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAMNVGK"	"[R].vNLAMNVGk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8246"	"0.0000"	"1"	"1"	"1"	"702.42517"	"1403.84307"	"1403.84448"	"-1.01"	"-0.00071"	"8/80"	"8"	"80"	"38362623.0202637"	"HCD"	"MS2"	"0"	"1204.4"	"49.138"	"42.9070"	"12006"	"12006"	"11987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2177.5"	""	"1902.6"	""	"1933.5"	""	"1139.2"	""	"1905.5"	"2330.6"	""	"799"	"57"	"36.000"	"29.000"	"7.68275145699609E-05"	"26"	"0.0001859"	"0.0003746"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIALDGDTK"	"[R].iIALDGDTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"702.42828"	"1403.84929"	"1403.85100"	"-1.22"	"-0.00086"	"14/70"	"14"	"70"	"7524297.79608154"	"HCD"	"MS2"	"0"	"539.0"	"100.000"	"45.1040"	"12849"	"12849"	"12832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"850.8"	""	"654.4"	""	"736.0"	""	"912.2"	""	"965.2"	"990.0"	""	"751"	"49"	"35.000"	"28.000"	"0.000484852837241882"	"28"	"0.0001308"	"0.0002138"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIALDGDTK"	"[R].iIALDGDTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"702.42834"	"1403.84941"	"1403.85100"	"-1.13"	"-0.00079"	"14/70"	"14"	"70"	"7266726.85375977"	"HCD"	"MS2"	"7.806985"	"517.0"	"100.000"	"45.3338"	"12991"	"12991"	"12971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"819.0"	""	"631.2"	""	"710.7"	""	"851.8"	"2.1"	"913.6"	"966.6"	""	"755"	"47"	"35.000"	"28.000"	"0.000768983384333909"	"26"	"0.0001308"	"0.0002208"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNPLFEK"	"[K].vVNPLFEk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"702.43585"	"1403.86443"	"1403.86626"	"-1.30"	"-0.00092"	"7/66"	"7"	"66"	"1415296.88140869"	"HCD"	"MS2"	"0"	"116.4"	"100.000"	"50.3548"	"14983"	"14983"	"14964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.2"	""	"165.7"	""	"170.0"	""	"185.6"	""	"223.9"	"204.4"	""	"620"	"37"	"34.000"	"27.000"	"0.00686059359977748"	"18"	"0.0001889"	"0.00039"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNPLFEK"	"[K].vVNPLFEk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"702.43713"	"1403.86699"	"1403.86626"	"0.52"	"0.00037"	"7/66"	"7"	"66"	"9979549.79724121"	"HCD"	"MS2"	"45.63837"	"400.4"	"61.400"	"50.3080"	"15015"	"15015"	"14998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"549.5"	""	"567.5"	""	"563.8"	""	"684.6"	""	"762.7"	"667.2"	""	"560"	"44"	"34.000"	"27.000"	"0.00109940581911888"	"22"	"0.0001889"	"0.0008186"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNPLFEK"	"[K].vVNPLFEk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"702.43756"	"1403.86785"	"1403.86626"	"1.13"	"0.00079"	"7/66"	"7"	"66"	"9432848.14599609"	"HCD"	"MS2"	"30.60704"	"558.9"	"91.335"	"49.9976"	"14841"	"14841"	"14835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"750.1"	""	"771.7"	""	"801.0"	""	"964.1"	""	"1035.1"	"978.5"	""	"558"	"43"	"34.000"	"27.000"	"0.0013633400825665"	"19"	"0.0001889"	"0.0007997"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLEVLSLK"	"[K].gSLEVLSLk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.7167"	"0.0000"	"1"	"1"	"1"	"702.44757"	"1403.88786"	"1403.88739"	"0.34"	"0.00024"	"8/74"	"8"	"74"	"5226893.7020874"	"HCD"	"MS2"	"14.70481"	"388.3"	"100.000"	"53.0284"	"16126"	"16126"	"16102"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"407.3"	""	"447.3"	""	"485.1"	""	"703.5"	""	"793.0"	"857.8"	""	"360"	"60"	"32.000"	"25.000"	"1.83769107067382E-05"	""	"0"	"0.000131"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLEVLSLK"	"[K].gSLEVLSLk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"702.44775"	"1403.88823"	"1403.88739"	"0.60"	"0.00042"	"14/74"	"14"	"74"	"5153247.42120361"	"HCD"	"MS2"	"15.83962"	"384.0"	"100.000"	"52.8345"	"15997"	"15997"	"15970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"396.7"	""	"441.9"	""	"474.8"	""	"684.6"	""	"819.4"	"832.6"	""	"360"	"54"	"32.000"	"25.000"	"7.85728498032298E-05"	""	"0"	"0.0001606"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTITLVLK"	"[R].gTTITLVLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"702.45404"	"1403.90080"	"1403.92377"	"-16.36"	"-0.01148"	"8/70"	"8"	"70"	"8910479.43188477"	"HCD"	"MS2"	"44.26659"	"532.1"	"100.000"	"51.8518"	"15595"	"15595"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"752.1"	""	"761.7"	""	"761.2"	""	"881.1"	"2.0"	"925.5"	"953.8"	""	"264"	"16"	"31.000"	"24.000"	"0.366922151344226"	"21"	"0.004945"	"0.1488"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPLLFLK"	"[K].nTPLLFLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"702.45416"	"1403.90105"	"1403.90264"	"-1.14"	"-0.00080"	"7/70"	"7"	"70"	"2695473.46160889"	"HCD"	"MS2"	"9.830709"	"200.5"	"100.000"	"61.6183"	"19614"	"19614"	"19587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.4"	""	"265.0"	""	"290.0"	""	"304.8"	"2.6"	"350.9"	"378.0"	""	"264"	"20"	"31.000"	"24.000"	"0.136638766001673"	"20"	"0.001912"	"0.02725"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTITLVLK"	"[R].gTTITLVLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"702.45471"	"1403.90215"	"1403.92377"	"-15.40"	"-0.01081"	"8/70"	"8"	"70"	"9064840.52270508"	"HCD"	"MS2"	"29.43077"	"518.9"	"100.000"	"52.0475"	"15725"	"15725"	"15702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"735.0"	""	"713.2"	""	"776.4"	""	"837.1"	"0.1"	"886.2"	"964.7"	""	"228"	"14"	"30.000"	"23.000"	"0.44351146529348"	"23"	"0.003635"	"0.08316"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPLLFLK"	"[K].nTPLLFLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"702.45532"	"1403.90337"	"1403.90264"	"0.52"	"0.00036"	"7/70"	"7"	"70"	"2670758.47851563"	"HCD"	"MS2"	"14.4574"	"200.6"	"100.000"	"61.4434"	"19489"	"19489"	"19465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.1"	""	"247.0"	""	"300.5"	""	"313.2"	"5.4"	"337.5"	"385.6"	""	"228"	"17"	"30.000"	"23.000"	"0.245982862643404"	"17"	"0.00252"	"0.0385"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLPLGHIK"	"[R].aPLPLGHIk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"468.64246"	"1403.91281"	"1403.91388"	"-0.76"	"-0.00035"	"8/66"	"8"	"66"	"36603643.3397827"	"HCD"	"MS2"	"20.26491"	"1104.3"	"82.029"	"38.1785"	"10073"	"10073"	"10049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1573.8"	""	"1500.6"	""	"1442.3"	""	"1918.0"	""	"1859.1"	"2170.4"	""	"198"	"36"	"29.000"	"22.000"	"0.00225753865128041"	""	"0"	"9.54E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKLPSGK"	"[R].skLPSGk.[N]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.64355"	"1403.91611"	"1403.91891"	"-1.99"	"-0.00093"	"6/66"	"6"	"66"	"10273914.3034058"	"HCD"	"MS2"	"41.42591"	"761.1"	"100.000"	"27.8391"	"5885"	"5885"	"5857"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1168.8"	""	"1054.8"	""	"1137.2"	""	"1129.9"	""	"1343.2"	"1371.7"	""	"158"	"1"	"28.000"	"21.000"	"6.21766173859128"	"13"	"0.008648"	"0.3745"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKLPSGK"	"[R].skLPSGk.[N]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.64377"	"1403.91675"	"1403.91891"	"-1.54"	"-0.00072"	"6/66"	"6"	"66"	"9710999.57592773"	"HCD"	"MS2"	"39.79012"	"734.9"	"100.000"	"27.7784"	"5825"	"5825"	"5804"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1106.6"	""	"1034.5"	""	"1064.8"	""	"1130.0"	""	"1298.4"	"1331.5"	""	"158"	"1"	"28.000"	"21.000"	"6.91237182429675"	"13"	"0.004913"	"0.1459"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTITLVLK"	"[R].gTTITLVLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"702.46545"	"1403.92363"	"1403.92377"	"-0.10"	"-0.00007"	"13/70"	"13"	"70"	"4665368.84460449"	"HCD"	"MS2"	"13.91039"	"324.0"	"100.000"	"51.6473"	"15511"	"15511"	"15490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"311.6"	""	"443.2"	""	"466.0"	""	"599.4"	"0.6"	"621.6"	"631.6"	""	"123"	"48"	"27.000"	"20.000"	"0.000106383706091729"	""	"0.0003839"	"0.001564"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTITLVLK"	"[R].gTTITLVLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"702.46600"	"1403.92473"	"1403.92377"	"0.68"	"0.00048"	"13/70"	"13"	"70"	"4678812.73620605"	"HCD"	"MS2"	"9.582811"	"334.6"	"100.000"	"51.8128"	"15629"	"15629"	"15606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"323.5"	""	"446.1"	""	"510.1"	""	"601.9"	""	"634.5"	"659.1"	""	"123"	"43"	"27.000"	"20.000"	"0.000306813959787907"	""	"0.0004166"	"0.002318"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFYFVNGK"	"[K].aFYFVnGk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"B5DEH0"	"LIM domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Limd1 PE=1 SV=1"	"B5DEH0"	"LIM domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Limd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"702.90112"	"1404.79497"	"1404.79276"	"1.57"	"0.00111"	"11/62"	"11"	"62"	"2919828.137146"	"HCD"	"MS2"	"18.14909"	"251.2"	"100.000"	"52.7192"	"15950"	"15950"	"15922"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"316.4"	""	"314.8"	""	"327.9"	""	"405.6"	""	"512.1"	"511.1"	""	"1013"	"18"	"37.000"	"30.000"	"0.832874277808363"	"19"	"0.0002277"	"0.001117"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFYFVNGK"	"[K].aFYFVnGk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"B5DEH0"	"LIM domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Limd1 PE=1 SV=1"	"B5DEH0"	"LIM domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Limd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"702.90149"	"1404.79570"	"1404.79276"	"2.09"	"0.00147"	"7/62"	"7"	"62"	"2799874.20812988"	"HCD"	"MS2"	"27.07152"	"238.0"	"100.000"	"52.8740"	"16063"	"16063"	"16038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"331.7"	""	"303.6"	""	"306.5"	""	"384.2"	""	"477.9"	"455.9"	""	"1015"	"25"	"37.000"	"30.000"	"0.154324915053071"	"19"	"0.0001889"	"0.0008922"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPHLFTGK"	"[K].fPHLFTGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"468.95135"	"1404.83951"	"1404.84038"	"-0.62"	"-0.00029"	"11/56"	"11"	"56"	"10023824.842041"	"HCD"	"MS2"	"16.57663"	"342.7"	"95.066"	"45.1471"	"12915"	"12915"	"12891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"456.8"	""	"457.6"	""	"486.4"	""	"597.3"	"1.1"	"611.9"	"635.7"	""	"730"	"40"	"35.000"	"28.000"	"0.00389307584249044"	"20"	"0.0001889"	"0.000427"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPHLFTGK"	"[K].fPHLFTGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.95139"	"1404.83960"	"1404.84038"	"-0.55"	"-0.00026"	"6/56"	"6"	"56"	"9260493.76678467"	"HCD"	"MS2"	"14.73437"	"278.9"	"76.233"	"44.8829"	"12758"	"12758"	"12736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.9"	""	"381.6"	""	"401.8"	""	"492.4"	""	"498.5"	"494.6"	""	"732"	"30"	"35.000"	"28.000"	"0.0358493334659584"	"14"	"0.0001889"	"0.0004746"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIEAMLK"	"[R].eIIEAMLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.5227"	"0.0000"	"1"	"1"	"1"	"702.92963"	"1404.85198"	"1404.85364"	"-1.19"	"-0.00083"	"7/62"	"7"	"62"	"4448391.13128662"	"HCD"	"MS2"	"44.45217"	"337.4"	"100.000"	"61.4062"	"19527"	"19527"	"19507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"449.2"	""	"498.8"	"4.6"	"507.1"	""	"523.2"	"4.1"	"607.7"	"601.4"	""	"598"	"44"	"34.000"	"27.000"	"0.00112634435896189"	""	"0.0001889"	"0.0005153"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIEAMLK"	"[R].eIIEAMLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.5227"	"0.0000"	"1"	"1"	"1"	"702.93036"	"1404.85344"	"1404.85364"	"-0.14"	"-0.00010"	"7/62"	"7"	"62"	"4295665.99139404"	"HCD"	"MS2"	"45.89531"	"333.1"	"100.000"	"61.2425"	"19407"	"19407"	"19385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"446.8"	""	"477.9"	""	"496.8"	""	"502.6"	""	"602.0"	"633.3"	""	"581"	"44"	"34.000"	"27.000"	"0.00111210587933537"	""	"0.0001889"	"0.0004385"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].vSTVLTAQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"702.94385"	"1404.88042"	"1404.88264"	"-1.58"	"-0.00111"	"8/74"	"8"	"74"	"3362322.21356201"	"HCD"	"MS2"	"0"	"274.4"	"100.000"	"37.1796"	"9620"	"9620"	"9594"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.4"	""	"224.5"	""	"283.3"	""	"646.6"	"24.1"	"633.3"	"571.5"	""	"357"	"5"	"32.000"	"25.000"	"5.10079911992428"	"16"	"0.0003839"	"0.001688"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].vSTVLTAQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.94440"	"1404.88152"	"1404.88264"	"-0.80"	"-0.00056"	"8/74"	"8"	"74"	"1933108.07611084"	"HCD"	"MS2"	"0"	"176.9"	"100.000"	"37.2319"	"9685"	"9685"	"9654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.8"	""	"189.9"	""	"232.0"	""	"281.9"	"1.9"	"394.4"	"375.7"	""	"340"	"38"	"32.000"	"25.000"	"0.002981596853131"	"15"	"0.0001308"	"0.0002292"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].vSTVLTAQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"468.96552"	"1404.88199"	"1404.88264"	"-0.46"	"-0.00021"	"9/74"	"9"	"74"	"156075661.246582"	"HCD"	"MS2"	"45.93132"	"502.8"	"8.845"	"38.3983"	"10163"	"10163"	"10145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"738.1"	""	"703.1"	""	"701.4"	""	"818.7"	""	"873.8"	"934.6"	""	"336"	"32"	"32.000"	"25.000"	"0.0102166680214825"	"16"	"0.0003839"	"0.001827"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].vSTVLTAQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"702.94470"	"1404.88213"	"1404.88264"	"-0.36"	"-0.00025"	"8/74"	"8"	"74"	"39127986.0510864"	"HCD"	"MS2"	"1.467036"	"1310.4"	"81.053"	"38.2550"	"10061"	"10061"	"10039"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1968.8"	""	"1792.2"	""	"1678.2"	""	"2288.9"	""	"2273.5"	"2440.2"	""	"336"	"58"	"32.000"	"25.000"	"2.91279071622695E-05"	"18"	"0.0001889"	"0.0005945"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].vSTVLTAQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9825"	"0.0000"	"1"	"1"	"1"	"702.94470"	"1404.88213"	"1404.88264"	"-0.36"	"-0.00025"	"8/74"	"8"	"74"	"45849907.2750854"	"HCD"	"MS2"	"0"	"1310.8"	"76.652"	"38.3617"	"10148"	"10148"	"10129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1996.9"	""	"1779.7"	""	"1717.5"	""	"2257.4"	""	"2252.9"	"2438.4"	""	"336"	"57"	"32.000"	"25.000"	"3.05709744246477E-05"	"17"	"0.0001889"	"0.0005164"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].vSTVLTAQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.94476"	"1404.88225"	"1404.88264"	"-0.28"	"-0.00019"	"8/74"	"8"	"74"	"9239415.96362305"	"HCD"	"MS2"	"1.216473"	"436.6"	"67.809"	"38.5964"	"10201"	"10201"	"10183"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"696.0"	""	"599.5"	""	"615.7"	""	"650.1"	"0.7"	"751.8"	"819.3"	""	"336"	"56"	"32.000"	"25.000"	"4.70228861698573E-05"	"16"	"0.0001308"	"0.0002745"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].vSTVLTAQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"468.96570"	"1404.88254"	"1404.88264"	"-0.07"	"-0.00003"	"8/74"	"8"	"74"	"161763580.548828"	"HCD"	"MS2"	"21.97333"	"453.7"	"8.366"	"38.3193"	"10088"	"10088"	"10071"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"680.6"	""	"629.9"	""	"645.0"	""	"733.3"	""	"767.9"	"844.6"	""	"336"	"31"	"32.000"	"25.000"	"0.013468191464913"	"19"	"0.0006037"	"0.003909"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].vSTVLTAQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"702.94495"	"1404.88262"	"1404.88264"	"-0.01"	"-0.00001"	"13/74"	"13"	"74"	"1734206.2520752"	"HCD"	"MS2"	"0"	"157.1"	"100.000"	"39.0331"	"10424"	"10424"	"10398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.1"	""	"199.5"	""	"209.9"	""	"280.3"	"3.9"	"290.5"	"284.8"	""	"336"	"39"	"32.000"	"25.000"	"0.00231371190774183"	"17"	"0"	"0.0001205"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].vSTVLTAQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"702.94495"	"1404.88262"	"1404.88264"	"-0.01"	"-0.00001"	"8/74"	"8"	"74"	"14021826.598999"	"HCD"	"MS2"	"0"	"379.9"	"43.299"	"38.6595"	"10271"	"10271"	"10257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"620.1"	""	"519.5"	""	"536.0"	""	"601.4"	"0.8"	"627.5"	"688.3"	""	"336"	"58"	"32.000"	"25.000"	"2.89940765854354E-05"	"18"	"0.0001859"	"0.0003183"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].vSTVLTAQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.94513"	"1404.88298"	"1404.88264"	"0.25"	"0.00017"	"8/74"	"8"	"74"	"1694023.00854492"	"HCD"	"MS2"	"0"	"154.6"	"100.000"	"38.9674"	"10354"	"10354"	"10326"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.6"	""	"167.4"	""	"197.4"	""	"289.6"	"1.6"	"292.0"	"302.5"	""	"335"	"38"	"32.000"	"25.000"	"0.00274798787010923"	"15"	"0"	"0.0001268"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEFVPTK"	"[R].iIEFVPTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.94684"	"1404.88640"	"1404.88666"	"-0.18"	"-0.00013"	"7/64"	"7"	"64"	"2717922.19146729"	"HCD"	"MS2"	"0"	"164.3"	"100.000"	"57.9494"	"18120"	"18120"	"18101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.0"	""	"212.6"	""	"236.9"	""	"252.2"	"2.8"	"293.6"	"305.8"	""	"290"	"12"	"31.000"	"24.000"	"1.02180495000236"	"13"	"0.0006037"	"0.005047"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"469.26801"	"1405.78946"	"1405.79138"	"-1.36"	"-0.00064"	"8/60"	"8"	"60"	"16716734.5073242"	"HCD"	"MS2"	"59.1557"	"360.9"	"51.205"	"37.8298"	"9930"	"9930"	"9905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"496.4"	""	"477.4"	""	"503.5"	""	"520.5"	""	"691.7"	"740.1"	""	"992"	"29"	"36.000"	"29.000"	"0.0578737570062238"	"15"	"0.0006037"	"0.005697"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"703.39838"	"1405.78948"	"1405.79138"	"-1.35"	"-0.00095"	"5/60"	"5"	"60"	"5904258.91101074"	"HCD"	"MS2"	"23.74444"	"340.9"	"100.000"	"37.4981"	"9751"	"9751"	"9720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"484.8"	""	"429.2"	""	"474.7"	""	"582.4"	"9.3"	"628.4"	"621.2"	""	"992"	"33"	"36.000"	"29.000"	"0.0224120548409961"	"20"	"0.001587"	"0.02174"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"703.39844"	"1405.78960"	"1405.79138"	"-1.27"	"-0.00089"	"6/60"	"6"	"60"	"7819510.93572998"	"HCD"	"MS2"	"0"	"352.8"	"73.922"	"37.8169"	"9881"	"9881"	"9863"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"525.2"	""	"466.6"	""	"500.9"	""	"545.8"	"5.0"	"645.7"	"652.5"	""	"992"	"44"	"36.000"	"29.000"	"0.00184281473632198"	"22"	"0.001454"	"0.02031"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"703.39850"	"1405.78972"	"1405.79138"	"-1.18"	"-0.00083"	"5/60"	"5"	"60"	"7053587.38775635"	"HCD"	"MS2"	"0"	"411.9"	"100.000"	"37.6281"	"9847"	"9847"	"9825"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"594.7"	""	"516.9"	""	"606.3"	""	"688.5"	"8.3"	"748.6"	"737.7"	""	"992"	"31"	"36.000"	"29.000"	"0.0385906129315743"	"20"	"0.001817"	"0.02524"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"703.39868"	"1405.79009"	"1405.79138"	"-0.92"	"-0.00065"	"6/60"	"6"	"60"	"6745452.31518555"	"HCD"	"MS2"	"0"	"394.9"	"100.000"	"37.9307"	"9971"	"9971"	"9953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"571.4"	""	"518.4"	""	"579.7"	""	"630.3"	""	"704.1"	"738.5"	""	"992"	"44"	"36.000"	"29.000"	"0.00191638020618818"	"22"	"0.001217"	"0.0181"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"469.26828"	"1405.79029"	"1405.79138"	"-0.78"	"-0.00036"	"8/60"	"8"	"60"	"16514364.6049805"	"HCD"	"MS2"	"55.63494"	"400.8"	"56.823"	"37.7160"	"9840"	"9840"	"9816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"567.7"	""	"509.0"	""	"567.0"	""	"605.8"	""	"767.9"	"784.2"	""	"986"	"30"	"36.000"	"29.000"	"0.0538080085869237"	"15"	"0.0009727"	"0.01047"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPWFAGNK"	"[K].qPWFAGNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"703.40192"	"1405.79656"	"1405.79924"	"-1.91"	"-0.00134"	"7/72"	"7"	"72"	"4906902.61297607"	"HCD"	"MS2"	"24.68052"	"369.0"	"100.000"	"41.2539"	"11288"	"11288"	"11269"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"545.7"	""	"477.1"	""	"471.8"	""	"603.9"	""	"692.3"	"706.7"	""	"958"	"25"	"36.000"	"29.000"	"0.168397451013055"	"23"	"0.0003839"	"0.001798"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPWFAGNK"	"[K].qPWFAGNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"703.40192"	"1405.79656"	"1405.79924"	"-1.91"	"-0.00134"	"7/72"	"7"	"72"	"4772231.88000488"	"HCD"	"MS2"	"0"	"367.1"	"100.000"	"41.4442"	"11410"	"11410"	"11389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"562.5"	""	"499.8"	""	"480.1"	""	"581.7"	"2.6"	"641.8"	"708.0"	""	"958"	"27"	"36.000"	"29.000"	"0.106988109473582"	"28"	"0.0002723"	"0.001375"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPWFAGNK"	"[K].qPWFAGNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"703.40253"	"1405.79778"	"1405.79924"	"-1.04"	"-0.00073"	"7/72"	"7"	"72"	"11364755.480896"	"HCD"	"MS2"	"0"	"751.9"	"100.000"	"40.9673"	"11171"	"11171"	"11141"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1038.7"	""	"975.6"	""	"1017.2"	""	"1197.5"	""	"1445.2"	"1467.8"	""	"953"	"24"	"36.000"	"29.000"	"0.184528267805151"	"19"	"0.0003839"	"0.001954"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPWFAGNK"	"[K].qPWFAGNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"469.27081"	"1405.79789"	"1405.79924"	"-0.96"	"-0.00045"	"11/72"	"11"	"72"	"24552945.9525146"	"HCD"	"MS2"	"12.36887"	"408.3"	"54.091"	"41.0660"	"11211"	"11211"	"11189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"559.9"	""	"530.2"	""	"563.6"	""	"647.8"	"4.2"	"790.9"	"774.5"	""	"954"	"36"	"36.000"	"29.000"	"0.0128978813967992"	"24"	"0.0003571"	"0.001484"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPWFAGNK"	"[K].qPWFAGNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"469.27106"	"1405.79862"	"1405.79924"	"-0.44"	"-0.00021"	"6/72"	"6"	"72"	"22991709.1416626"	"HCD"	"MS2"	"9.925481"	"447.9"	"65.302"	"41.2475"	"11329"	"11329"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"638.0"	""	"587.3"	""	"613.9"	""	"705.1"	"0.2"	"827.8"	"872.6"	""	"953"	"29"	"36.000"	"29.000"	"0.0613850911381779"	"22"	"0.0004166"	"0.002108"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPWFAGNK"	"[K].qPWFAGNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"703.40320"	"1405.79912"	"1405.79924"	"-0.09"	"-0.00006"	"6/72"	"6"	"72"	"12570971.0980835"	"HCD"	"MS2"	"7.435182"	"769.3"	"100.000"	"41.1415"	"11286"	"11286"	"11261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1153.5"	""	"1020.9"	""	"1000.5"	""	"1227.5"	"3.7"	"1417.3"	"1466.4"	""	"951"	"41"	"36.000"	"29.000"	"0.00397329235168958"	"22"	"0.0002277"	"0.001162"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSVDSVLK"	"[R].lSSVDSVLk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"703.43707"	"1405.86687"	"1405.86665"	"0.15"	"0.00011"	"16/72"	"16"	"72"	"4500315.72497559"	"HCD"	"MS2"	"24.39116"	"344.6"	"100.000"	"47.9491"	"14056"	"14056"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"362.7"	""	"370.6"	""	"427.4"	""	"530.2"	""	"906.4"	"686.1"	""	"496"	"60"	"33.000"	"26.000"	"2.65125610047219E-05"	""	"0.0001889"	"0.0005235"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSVDSVLK"	"[R].lSSVDSVLk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"703.43726"	"1405.86724"	"1405.86665"	"0.41"	"0.00029"	"8/72"	"8"	"72"	"4016270.54376221"	"HCD"	"MS2"	"18.90156"	"314.2"	"100.000"	"47.6923"	"13903"	"13903"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.2"	""	"334.7"	""	"370.9"	""	"483.2"	""	"859.5"	"635.5"	""	"498"	"56"	"33.000"	"26.000"	"6.14043794971351E-05"	""	"0.0001889"	"0.0005329"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGLPGSLK"	"[R].yLGLPGSLk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"703.44391"	"1405.88054"	"1405.88191"	"-0.97"	"-0.00068"	"7/64"	"7"	"64"	"805311.242980957"	"HCD"	"MS2"	"33.48174"	"76.4"	"100.000"	"54.4214"	"16678"	"16678"	"16651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.6"	""	"91.8"	""	"107.0"	""	"142.5"	"0.2"	"145.0"	"135.0"	""	"373"	"19"	"32.000"	"25.000"	"0.242481626303209"	"20"	"0.0006737"	"0.006534"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGLPGSLK"	"[R].yLGLPGSLk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"703.44409"	"1405.88091"	"1405.88191"	"-0.71"	"-0.00050"	"8/64"	"8"	"64"	"1052178.62579346"	"HCD"	"MS2"	"0"	"93.6"	"100.000"	"54.1028"	"16548"	"16548"	"16529"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.3"	""	"120.5"	""	"127.9"	""	"147.4"	"3.4"	"197.6"	"184.4"	""	"345"	"41"	"32.000"	"25.000"	"0.00143149257396238"	"24"	"0.0001889"	"0.0005899"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNILMLK"	"[K].vTNILmLk.[G]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	""	""	"Q66H20"	"Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ptbp2 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"703.44598"	"1405.88469"	"1405.88528"	"-0.42"	"-0.00029"	"10/66"	"10"	"66"	"5500238.95892334"	"HCD"	"MS2"	"11.56404"	"292.2"	"100.000"	"58.4235"	"18314"	"18314"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.8"	""	"247.7"	""	"259.0"	""	"884.7"	"0.6"	"545.5"	"543.1"	""	"341"	"23"	"32.000"	"25.000"	"0.0911432232771838"	"21"	"0.0004166"	"0.002352"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNLLMLK"	"[K].vTNLLmLk.[G]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"2"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"703.44598"	"1405.88469"	"1405.88528"	"-0.42"	"-0.00029"	"10/66"	"10"	"66"	"5500238.95892334"	"HCD"	"MS2"	"11.56404"	"292.2"	"100.000"	"58.4235"	"18314"	"18314"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.8"	""	"247.7"	""	"259.0"	""	"884.7"	"0.6"	"545.5"	"543.1"	""	"341"	"23"	"32.000"	"25.000"	"0.0911432232771838"	"21"	"0.0004166"	"0.002352"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNILMLK"	"[K].vTNILmLk.[G]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	""	""	"Q66H20"	"Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ptbp2 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"703.44690"	"1405.88652"	"1405.88528"	"0.88"	"0.00062"	"7/66"	"7"	"66"	"4846042.9331665"	"HCD"	"MS2"	"28.81024"	"257.9"	"100.000"	"58.1834"	"18162"	"18162"	"18139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.2"	""	"231.2"	""	"239.7"	""	"758.3"	"1.0"	"470.9"	"475.2"	""	"327"	"16"	"32.000"	"25.000"	"0.399500895365464"	"16"	"0.0005564"	"0.003376"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNLLMLK"	"[K].vTNLLmLk.[G]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"2"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"703.44690"	"1405.88652"	"1405.88528"	"0.88"	"0.00062"	"7/66"	"7"	"66"	"4846042.9331665"	"HCD"	"MS2"	"28.81024"	"257.9"	"100.000"	"58.1834"	"18162"	"18162"	"18139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.2"	""	"231.2"	""	"239.7"	""	"758.3"	"1.0"	"470.9"	"475.2"	""	"327"	"16"	"32.000"	"25.000"	"0.399500895365464"	"16"	"0.0005564"	"0.003376"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGDIFLVR"	"[R].kGDIFLVR.[G]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"469.30212"	"1405.89182"	"1405.89314"	"-0.94"	"-0.00044"	"7/70"	"7"	"70"	"61532200.8952637"	"HCD"	"MS2"	"13.86747"	"794.5"	"24.179"	"39.2611"	"10474"	"10474"	"10454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1151.1"	""	"1125.6"	""	"1160.6"	""	"1286.6"	"1.8"	"1386.4"	"1408.7"	""	"273"	"15"	"31.000"	"24.000"	"0.475480435024156"	"13"	"0.0006037"	"0.005396"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGDIFLVR"	"[R].kGDIFLVR.[G]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"469.30231"	"1405.89237"	"1405.89314"	"-0.55"	"-0.00026"	"7/70"	"7"	"70"	"51076492.2739258"	"HCD"	"MS2"	"11.6531"	"541.6"	"19.508"	"39.4096"	"10578"	"10578"	"10558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"764.3"	""	"713.6"	""	"795.0"	""	"874.3"	""	"1005.3"	"980.3"	""	"267"	"18"	"31.000"	"24.000"	"0.189444179145494"	"14"	"0.0008125"	"0.007674"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWQFIK"	"[R].iIWQFIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"469.30316"	"1405.89493"	"1405.89716"	"-1.59"	"-0.00074"	"7/56"	"7"	"56"	"849857.76361084"	"HCD"	"MS2"	"8.717512"	"34.4"	"100.000"	"75.8773"	"25374"	"25374"	"25345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.6"	""	"50.3"	""	"57.8"	""	"53.2"	""	"60.1"	"53.4"	""	"250"	"16"	"30.000"	"23.000"	"0.308254917154292"	"23"	"0.001058"	"0.01346"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWQFIK"	"[R].iIWQFIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.3571"	"0.0000"	"1"	"1"	"1"	"469.30344"	"1405.89576"	"1405.89716"	"-1.00"	"-0.00047"	"7/56"	"7"	"56"	"779020.022338867"	"HCD"	"MS2"	"14.31576"	"28.5"	"100.000"	"75.8996"	"25435"	"25435"	"25407"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.5"	""	"45.5"	""	"51.0"	""	"40.2"	""	"46.7"	"49.5"	""	"248"	"14"	"30.000"	"23.000"	"0.470350581367366"	"22"	"0.0008125"	"0.00751"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWQFIK"	"[R].iIWQFIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"703.45160"	"1405.89592"	"1405.89716"	"-0.88"	"-0.00062"	"12/56"	"12"	"56"	"2590239.13739014"	"HCD"	"MS2"	"25.21486"	"168.7"	"100.000"	"75.7151"	"25360"	"25360"	"25343"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"257.6"	""	"277.2"	""	"304.3"	""	"263.9"	"2.0"	"228.4"	"258.2"	""	"248"	"32"	"30.000"	"23.000"	"0.00761064886404346"	""	"0.0006037"	"0.004473"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWQFIK"	"[R].iIWQFIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"703.45166"	"1405.89604"	"1405.89716"	"-0.80"	"-0.00056"	"12/56"	"12"	"56"	"1172414.71563721"	"HCD"	"MS2"	"23.80978"	"86.3"	"100.000"	"76.0390"	"25488"	"25488"	"25471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.1"	""	"147.8"	""	"150.0"	""	"135.4"	""	"116.1"	"137.7"	""	"248"	"32"	"30.000"	"23.000"	"0.00836414754345423"	""	"0.0003839"	"0.001596"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWQFIK"	"[R].iIWQFIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.2963"	"0.0000"	"1"	"1"	"1"	"703.45197"	"1405.89665"	"1405.89716"	"-0.36"	"-0.00026"	"6/56"	"6"	"56"	"1422850.23895264"	"HCD"	"MS2"	"28.40749"	"107.6"	"100.000"	"76.0438"	"25442"	"25442"	"25425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.1"	""	"165.4"	""	"191.3"	""	"158.3"	"1.1"	"156.8"	"178.4"	""	"239"	"27"	"30.000"	"23.000"	"0.0217454252603893"	""	"0.0001889"	"0.0009899"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIWQFIK"	"[R].iIWQFIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"703.45233"	"1405.89739"	"1405.89716"	"0.16"	"0.00011"	"12/56"	"12"	"56"	"2356260.98077393"	"HCD"	"MS2"	"18.7555"	"157.9"	"100.000"	"75.7342"	"25315"	"25315"	"25297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"238.6"	""	"261.1"	""	"277.1"	""	"235.9"	"3.4"	"225.0"	"249.9"	""	"239"	"31"	"30.000"	"23.000"	"0.0099854560678634"	""	"0.0003839"	"0.001715"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEQFSK"	"[K].fYEQFSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"469.59512"	"1406.77082"	"1406.77202"	"-0.86"	"-0.00040"	"4/60"	"4"	"60"	"8450995.35614014"	"HCD"	"MS2"	"29.91859"	"240.9"	"71.357"	"44.8047"	"12726"	"12726"	"12704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"359.7"	""	"327.5"	""	"358.8"	""	"369.9"	"1.7"	"416.0"	"447.1"	""	"951"	"18"	"36.000"	"29.000"	"0.713100139281379"	"14"	"0.003882"	"0.09866"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEQFSK"	"[K].fYEQFSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"469.59521"	"1406.77109"	"1406.77202"	"-0.66"	"-0.00031"	"4/60"	"4"	"60"	"8293633.95056152"	"HCD"	"MS2"	"24.86753"	"330.6"	"100.000"	"45.0643"	"12881"	"12881"	"12859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"517.0"	""	"464.8"	""	"488.0"	""	"521.9"	"3.1"	"573.1"	"560.5"	""	"947"	"20"	"36.000"	"29.000"	"0.469158925906725"	"16"	"0.004199"	"0.1076"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEQFSK"	"[K].fYEQFSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"703.88983"	"1406.77239"	"1406.77202"	"0.26"	"0.00018"	"10/60"	"10"	"60"	"25216435.2734985"	"HCD"	"MS2"	"21.48827"	"1878.3"	"88.346"	"44.9790"	"12846"	"12846"	"12827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3217.0"	""	"2687.1"	""	"2786.1"	""	"2847.3"	"34.4"	"2988.5"	"3195.1"	""	"987"	"23"	"36.000"	"29.000"	"0.248477550436831"	"26"	"0.001718"	"0.02344"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEQFSK"	"[K].fYEQFSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"703.89032"	"1406.77336"	"1406.77202"	"0.95"	"0.00067"	"12/60"	"12"	"60"	"31868143.8012695"	"HCD"	"MS2"	"20.31853"	"977.1"	"36.120"	"44.7520"	"12705"	"12705"	"12688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1610.3"	""	"1373.8"	""	"1470.2"	""	"1464.5"	"12.9"	"1606.2"	"1702.3"	""	"975"	"20"	"36.000"	"29.000"	"0.441544642937873"	"24"	"0.002829"	"0.04755"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HICQFQK"	"[K].hIcQFQk.[D]"	"N-Term(TMT6plex); C3(Methylthio); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"469.92590"	"1407.76316"	"1407.76412"	"-0.68"	"-0.00032"	"7/56"	"7"	"56"	"12412948.918335"	"HCD"	"MS2"	"18.09633"	"365.3"	"61.026"	"36.5536"	"9363"	"9363"	"9338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"532.3"	""	"535.4"	""	"516.5"	""	"538.6"	"2.3"	"664.9"	"670.1"	""	"956"	"14"	"36.000"	"29.000"	"1.73152153243182"	"17"	"0.0005564"	"0.003644"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HICQFQK"	"[K].hIcQFQk.[D]"	"N-Term(TMT6plex); C3(Methylthio); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.3846"	"0.0000"	"1"	"1"	"1"	"469.92599"	"1407.76343"	"1407.76412"	"-0.49"	"-0.00023"	"7/56"	"7"	"56"	"9130836.76763916"	"HCD"	"MS2"	"21.13822"	"430.7"	"100.000"	"36.6747"	"9456"	"9456"	"9431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"689.2"	""	"600.2"	""	"638.3"	""	"611.0"	"9.8"	"725.0"	"802.2"	""	"919"	"13"	"36.000"	"29.000"	"2.54264375184631"	"21"	"0.0006037"	"0.004006"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPMTVDFIR"	"[R].sIPMTVDFIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"704.39575"	"1407.78423"	"1407.78674"	"-1.78"	"-0.00126"	"7/84"	"7"	"84"	"4832692.23980713"	"HCD"	"MS2"	"8.255326"	"227.9"	"100.000"	"60.1956"	"19033"	"19033"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"370.4"	""	"352.3"	""	"359.2"	""	"257.0"	""	"407.7"	"411.8"	""	"917"	"40"	"36.000"	"29.000"	"0.00432851911777096"	"19"	"0"	"8.991E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPMTVDFIR"	"[R].sIPMTVDFIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"704.39661"	"1407.78594"	"1407.78674"	"-0.57"	"-0.00040"	"7/84"	"7"	"84"	"3997256.86950684"	"HCD"	"MS2"	"4.763956"	"199.5"	"100.000"	"60.0300"	"18912"	"18912"	"18889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.3"	""	"322.4"	""	"298.2"	""	"244.7"	""	"364.9"	"359.8"	""	"899"	"40"	"36.000"	"29.000"	"0.00439268130819637"	"19"	"0"	"7.062E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TYDYLFK"	"[K].tYDYLFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P70550; P35280"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"P70550; P35280"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"704.39966"	"1407.79204"	"1407.79242"	"-0.27"	"-0.00019"	"5/52"	"5"	"52"	"8427214.640625"	"HCD"	"MS2"	"5.816119"	"761.6"	"100.000"	"52.2778"	"15769"	"15769"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1025.2"	""	"1092.2"	""	"1078.6"	""	"1163.1"	"5.2"	"1410.5"	"1443.2"	""	"885"	"32"	"36.000"	"29.000"	"0.0283735237638934"	"24"	"0.0006037"	"0.003747"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"YTDYIFK"	"[].yTDYIFk.[]"	"N-Term(TMT6plex); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"704.39966"	"1407.79204"	"1407.79242"	"-0.27"	"-0.00019"	"5/50"	"5"	"50"	"8427214.640625"	"HCD"	"MS2"	"5.816119"	"761.6"	"100.000"	"52.2778"	"15769"	"15769"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1025.2"	""	"1092.2"	""	"1078.6"	""	"1163.1"	"5.2"	"1410.5"	"1443.2"	""	"885"	"32"	"36.000"	"29.000"	"0.0283735237638934"	"24"	"0.002953"	"0.05331"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYDYLFK"	"[K].tYDYLFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P70550; P35280"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"P70550; P35280"	"Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"704.39966"	"1407.79204"	"1407.79242"	"-0.27"	"-0.00019"	"12/52"	"12"	"52"	"8465196.17706299"	"HCD"	"MS2"	"2.2986"	"780.7"	"100.000"	"52.4783"	"15901"	"15901"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1074.9"	""	"1093.8"	""	"1079.7"	""	"1210.8"	"5.8"	"1453.1"	"1480.5"	""	"885"	"32"	"36.000"	"29.000"	"0.0309680083231006"	""	"0.0005564"	"0.003456"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDFNVPMK"	"[R].vDFNVPMk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"469.93954"	"1407.80408"	"1407.80703"	"-2.09"	"-0.00098"	"8/64"	"8"	"64"	"12092930.1772461"	"HCD"	"MS2"	"33.82752"	"423.9"	"100.000"	"50.9887"	"15242"	"15242"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"736.0"	""	"611.8"	""	"586.6"	""	"466.7"	"14.1"	"742.8"	"856.1"	""	"856"	"15"	"36.000"	"29.000"	"1.28956657835166"	"22"	"0.002165"	"0.0325"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDFNVPMK"	"[R].vDFNVPMk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"469.94016"	"1407.80591"	"1407.80703"	"-0.79"	"-0.00037"	"8/64"	"8"	"64"	"13740081.036499"	"HCD"	"MS2"	"29.20484"	"402.8"	"79.561"	"51.1845"	"15372"	"15372"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"693.1"	""	"580.2"	""	"547.4"	""	"451.9"	"6.2"	"719.5"	"816.6"	""	"832"	"15"	"36.000"	"29.000"	"1.46586282353675"	"22"	"0.003107"	"0.05965"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEGFLWK"	"[K].gLEGFLWk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"704.42102"	"1407.83476"	"1407.84004"	"-3.75"	"-0.00264"	"12/56"	"12"	"56"	"1842578.91070557"	"HCD"	"MS2"	"28.32398"	"130.9"	"100.000"	"67.0152"	"21765"	"21765"	"21737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.0"	""	"194.9"	""	"183.9"	""	"210.1"	""	"226.5"	"248.9"	""	"654"	"33"	"35.000"	"28.000"	"0.0155792932685371"	"23"	"0.0006037"	"0.004052"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEGFLWK"	"[K].gLEGFLWk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"704.42291"	"1407.83855"	"1407.84004"	"-1.06"	"-0.00075"	"7/56"	"7"	"56"	"2309347.89337158"	"HCD"	"MS2"	"46.57574"	"169.4"	"100.000"	"66.9157"	"21777"	"21777"	"21747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.1"	""	"248.5"	""	"246.7"	""	"277.4"	"1.5"	"288.8"	"306.3"	""	"599"	"28"	"34.000"	"27.000"	"0.0454356585054071"	"20"	"0.0005564"	"0.003368"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAFLTQK"	"[R].lEAFLTQk.[QA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2;Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2; Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"0"	"3"	"3"	"0.5517"	"0.0000"	"1"	"1"	"1"	"469.95795"	"1407.85929"	"1407.86117"	"-1.34"	"-0.00063"	"9/66"	"9"	"66"	"4568883.36102295"	"HCD"	"MS2"	"12.73694"	"164.2"	"100.000"	"57.6378"	"17939"	"17939"	"17915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.6"	""	"234.6"	""	"262.8"	""	"229.7"	""	"266.5"	"307.9"	""	"478"	"29"	"33.000"	"26.000"	"0.0296754901514586"	""	"0.0002277"	"0.001117"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAFLTQK"	"[R].lEAFLTQk.[QA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2;Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2; Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"469.95813"	"1407.85984"	"1407.86117"	"-0.95"	"-0.00045"	"8/66"	"8"	"66"	"3998314.29827881"	"HCD"	"MS2"	"0"	"147.2"	"100.000"	"57.8873"	"18095"	"18095"	"18069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.5"	"2.9"	"220.0"	""	"234.6"	""	"209.2"	""	"247.4"	"264.9"	""	"480"	"28"	"33.000"	"26.000"	"0.0401986290246344"	"25"	"0.0003839"	"0.001574"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLFIVSK"	"[R].qDLFIVSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"704.43427"	"1407.86125"	"1407.86117"	"0.06"	"0.00004"	"7/80"	"7"	"80"	"1299585.42907715"	"HCD"	"MS2"	"27.90015"	"130.9"	"100.000"	"51.7368"	"15598"	"15598"	"15574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.8"	""	"173.1"	""	"175.6"	""	"203.4"	""	"248.7"	"258.7"	""	"466"	"40"	"33.000"	"26.000"	"0.00212988385262568"	"22"	"0.0001889"	"0.0004572"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAFLTQK"	"[R].lEAFLTQk.[QA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2;Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2; Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"704.43542"	"1407.86357"	"1407.86117"	"1.70"	"0.00120"	"14/66"	"14"	"66"	"4025417.0881958"	"HCD"	"MS2"	"34.70655"	"308.0"	"100.000"	"57.7767"	"18050"	"18050"	"18021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"495.2"	""	"434.6"	""	"460.0"	""	"486.9"	""	"501.5"	"534.7"	""	"455"	"44"	"33.000"	"26.000"	"0.000820316412874237"	""	"0.0001889"	"0.001057"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAFLTQK"	"[R].lEAFLTQk.[QA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2;Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2; Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"704.43597"	"1407.86467"	"1407.86117"	"2.49"	"0.00175"	"14/66"	"14"	"66"	"4097118.45733643"	"HCD"	"MS2"	"30.15799"	"309.0"	"100.000"	"57.6055"	"17926"	"17926"	"17899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"501.4"	""	"424.5"	""	"465.4"	""	"465.8"	"3.1"	"524.5"	"538.2"	""	"424"	"43"	"33.000"	"26.000"	"0.00111259181572952"	""	"0.0001889"	"0.0007362"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILSYLAAK"	"[R].aILSYLAAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"469.97037"	"1407.89655"	"1407.89756"	"-0.72"	"-0.00034"	"10/64"	"10"	"64"	"3082482.88305664"	"HCD"	"MS2"	"2.399216"	"106.3"	"100.000"	"63.4430"	"20306"	"20306"	"20281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.9"	""	"158.9"	""	"182.5"	""	"175.0"	""	"155.3"	"174.2"	""	"218"	"33"	"30.000"	"23.000"	"0.00514548714977314"	"15"	"0.0003839"	"0.001552"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILSYLAAK"	"[R].aILSYLAAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"469.97052"	"1407.89701"	"1407.89756"	"-0.39"	"-0.00018"	"10/64"	"10"	"64"	"3069149.29504395"	"HCD"	"MS2"	"6.783673"	"96.9"	"100.000"	"63.5473"	"20402"	"20402"	"20371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.5"	""	"140.3"	""	"159.0"	""	"147.2"	""	"143.6"	"158.7"	""	"230"	"30"	"30.000"	"23.000"	"0.0115530815882015"	"14"	"0.0002277"	"0.001323"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLYIISVK"	"[K].nLYIISVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"704.45221"	"1407.89714"	"1407.89756"	"-0.30"	"-0.00021"	"6/70"	"6"	"70"	"1126752.75958252"	"HCD"	"MS2"	"0"	"104.7"	"100.000"	"54.0431"	"16470"	"16470"	"16445"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.9"	""	"162.7"	""	"170.5"	""	"147.8"	""	"176.7"	"187.0"	""	"230"	"24"	"30.000"	"23.000"	"0.0501993207076191"	"17"	"0.0001889"	"0.0006625"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILSYLAAK"	"[R].aILSYLAAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.9531"	"0.0000"	"1"	"1"	"1"	"704.45264"	"1407.89800"	"1407.89756"	"0.31"	"0.00022"	"16/64"	"16"	"64"	"7508130.24804688"	"HCD"	"MS2"	"20.91666"	"438.2"	"100.000"	"63.4780"	"20373"	"20373"	"20355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"697.9"	""	"671.2"	""	"810.8"	""	"657.2"	""	"583.0"	"718.9"	""	"229"	"64"	"30.000"	"23.000"	"4.81731989500188E-06"	"20"	"0.0001308"	"0.0002063"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILSYLAAK"	"[R].aILSYLAAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.9531"	"0.0000"	"1"	"1"	"1"	"704.45270"	"1407.89812"	"1407.89756"	"0.40"	"0.00028"	"16/64"	"16"	"64"	"6747237.63446045"	"HCD"	"MS2"	"27.74323"	"397.6"	"100.000"	"63.3874"	"20283"	"20283"	"20265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"633.4"	""	"619.6"	""	"710.2"	""	"623.0"	"0.8"	"545.9"	"619.5"	""	"229"	"64"	"30.000"	"23.000"	"4.66450418085709E-06"	"20"	"0.0001308"	"0.0002782"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSQYFK"	"[R].dYSQYFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"704.87897"	"1408.75066"	"1408.75129"	"-0.45"	"-0.00031"	"6/58"	"6"	"58"	"14366562.1484375"	"HCD"	"MS2"	"37.74545"	"1317.3"	"100.000"	"43.9169"	"12364"	"12364"	"12342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1919.6"	""	"1473.6"	""	"1668.0"	""	"2259.9"	""	"2344.6"	"2827.2"	""	"907"	"29"	"36.000"	"29.000"	"0.0543972933978243"	"19"	"0.0006037"	"0.005738"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSQYFK"	"[R].dYSQYFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"704.87909"	"1408.75090"	"1408.75129"	"-0.27"	"-0.00019"	"6/58"	"6"	"58"	"12860224.5324097"	"HCD"	"MS2"	"47.13722"	"1190.3"	"100.000"	"44.1601"	"12513"	"12513"	"12492"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1737.2"	""	"1295.5"	""	"1516.5"	""	"2080.6"	"17.2"	"2074.7"	"2562.2"	""	"907"	"28"	"36.000"	"29.000"	"0.0750891678433431"	"18"	"0.0006037"	"0.004614"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFWEPMK"	"[R].lFWEPMk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"704.90619"	"1408.80510"	"1408.80630"	"-0.85"	"-0.00060"	"5/48"	"5"	"48"	"3689947.26654053"	"HCD"	"MS2"	"4.331594"	"278.1"	"100.000"	"64.2911"	"20652"	"20652"	"20633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"420.1"	""	"410.3"	""	"384.2"	""	"318.2"	""	"520.8"	"583.3"	""	"792"	"33"	"35.000"	"28.000"	"0.01818424130834"	"27"	"0.0005564"	"0.0033"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFWEPMK"	"[R].lFWEPMk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"704.90631"	"1408.80535"	"1408.80630"	"-0.68"	"-0.00048"	"5/48"	"5"	"48"	"5722731.90380859"	"HCD"	"MS2"	"6.432734"	"402.1"	"100.000"	"64.0338"	"20600"	"20600"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"647.8"	""	"661.2"	""	"549.2"	""	"471.3"	""	"702.5"	"778.8"	""	"794"	"34"	"35.000"	"28.000"	"0.0171707990920899"	"27"	"0.0004166"	"0.002166"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFWEPMK"	"[R].lFWEPMk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"704.90631"	"1408.80535"	"1408.80630"	"-0.68"	"-0.00048"	"5/48"	"5"	"48"	"3650452.61700439"	"HCD"	"MS2"	"5.829185"	"270.6"	"100.000"	"64.3425"	"20726"	"20726"	"20707"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"406.0"	""	"412.0"	""	"362.1"	""	"315.9"	"5.9"	"488.4"	"574.6"	""	"794"	"33"	"35.000"	"28.000"	"0.0182721859711799"	"27"	"0.0004166"	"0.002194"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFWEPMK"	"[R].lFWEPMk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"470.27332"	"1408.80539"	"1408.80630"	"-0.64"	"-0.00030"	"7/48"	"7"	"48"	"3247810.71868896"	"HCD"	"MS2"	"9.039322"	"121.7"	"100.000"	"64.0699"	"20562"	"20562"	"20537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.5"	""	"198.9"	""	"168.4"	""	"150.5"	""	"203.0"	"255.9"	""	"794"	"22"	"35.000"	"28.000"	"0.253974729686611"	"25"	"0.000523"	"0.002881"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFWEPMK"	"[R].lFWEPMk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"470.27362"	"1408.80631"	"1408.80630"	"0.01"	"0.00000"	"7/48"	"7"	"48"	"3732268.74749756"	"HCD"	"MS2"	"0"	"141.9"	"100.000"	"64.1213"	"20636"	"20636"	"20611"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.9"	""	"222.7"	""	"182.0"	""	"179.6"	"0.4"	"248.8"	"284.0"	""	"793"	"19"	"35.000"	"28.000"	"0.560071136442922"	"22"	"0.0004166"	"0.002178"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFWEPMK"	"[R].lFWEPMk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"704.90717"	"1408.80705"	"1408.80630"	"0.54"	"0.00038"	"5/48"	"5"	"48"	"5218481.1932373"	"HCD"	"MS2"	"7.749145"	"376.0"	"100.000"	"63.9824"	"20526"	"20526"	"20505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"612.1"	""	"570.9"	""	"525.7"	""	"467.4"	""	"641.1"	"743.9"	""	"778"	"34"	"35.000"	"28.000"	"0.017019609890656"	"27"	"0.0003839"	"0.002064"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLWNNIK"	"[K].yLWNNIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"470.28290"	"1408.83414"	"1408.83529"	"-0.82"	"-0.00038"	"7/56"	"7"	"56"	"4762388.95391846"	"HCD"	"MS2"	"28.37493"	"175.1"	"100.000"	"50.7565"	"15147"	"15147"	"15122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.2"	""	"248.2"	""	"239.8"	""	"296.5"	"2.3"	"308.6"	"315.3"	""	"587"	"28"	"34.000"	"27.000"	"0.0426194759762003"	"25"	"0.0006037"	"0.004441"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLWNNIK"	"[K].yLWNNIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"704.92102"	"1408.83476"	"1408.83529"	"-0.37"	"-0.00026"	"12/56"	"12"	"56"	"2991216.49273682"	"HCD"	"MS2"	"0"	"253.9"	"100.000"	"50.8533"	"15237"	"15237"	"15206"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"367.2"	""	"369.4"	""	"373.1"	""	"405.7"	"1.9"	"442.6"	"443.5"	""	"584"	"31"	"34.000"	"27.000"	"0.0235712628832661"	""	"0.0004166"	"0.002348"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLWNNIK"	"[K].yLWNNIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"704.92108"	"1408.83489"	"1408.83529"	"-0.29"	"-0.00020"	"12/56"	"12"	"56"	"3234886.93811035"	"HCD"	"MS2"	"0"	"276.3"	"100.000"	"50.6691"	"15111"	"15111"	"15090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"400.5"	""	"412.9"	""	"407.7"	""	"449.0"	""	"472.4"	"476.6"	""	"584"	"33"	"34.000"	"27.000"	"0.0145674270338323"	"25"	"0.000523"	"0.003269"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLWNNIK"	"[K].yLWNNIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"470.28320"	"1408.83506"	"1408.83529"	"-0.17"	"-0.00008"	"9/56"	"9"	"56"	"5147464.07019043"	"HCD"	"MS2"	"43.64732"	"188.8"	"100.000"	"50.9590"	"15280"	"15280"	"15254"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"273.2"	""	"249.3"	""	"274.4"	""	"324.8"	""	"324.7"	"341.5"	""	"584"	"24"	"34.000"	"27.000"	"0.111015303725604"	"22"	"0.00252"	"0.03816"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMFLQAVK"	"[R].nMFLQAVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"704.92194"	"1408.83660"	"1408.83866"	"-1.47"	"-0.00103"	"14/72"	"14"	"72"	"4873445.33502197"	"HCD"	"MS2"	"19.33926"	"387.5"	"100.000"	"49.6711"	"14756"	"14756"	"14734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"600.4"	""	"541.1"	""	"591.9"	""	"458.8"	"0.2"	"716.3"	"762.5"	""	"577"	"45"	"34.000"	"27.000"	"0.000901873897415262"	"24"	"0.0009727"	"0.01035"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMFLQAVK"	"[R].nMFLQAVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"704.92249"	"1408.83769"	"1408.83866"	"-0.69"	"-0.00048"	"14/72"	"14"	"72"	"4796727.01727295"	"HCD"	"MS2"	"20.30723"	"394.8"	"100.000"	"49.3858"	"14596"	"14596"	"14575"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"591.5"	""	"562.5"	""	"616.0"	""	"475.8"	""	"732.9"	"762.0"	""	"553"	"47"	"34.000"	"27.000"	"0.000547892222635109"	"21"	"0.0006037"	"0.005228"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEITYTPK"	"[K].vEITYTPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"470.28641"	"1408.84467"	"1408.84519"	"-0.37"	"-0.00017"	"6/64"	"6"	"64"	"7630816.51605225"	"HCD"	"MS2"	"40.61659"	"315.3"	"100.000"	"40.2876"	"10936"	"10936"	"10909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"477.8"	""	"411.7"	""	"411.7"	""	"485.4"	"2.1"	"602.0"	"597.8"	""	"512"	"12"	"34.000"	"27.000"	"1.53900476795719"	"17"	"0.000523"	"0.00302"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEITYTPK"	"[K].vEITYTPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"704.92639"	"1408.84551"	"1408.84519"	"0.23"	"0.00016"	"12/64"	"12"	"64"	"3835282.046875"	"HCD"	"MS2"	"0"	"274.8"	"100.000"	"40.1103"	"10820"	"10820"	"10789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"408.8"	""	"414.1"	""	"390.1"	""	"430.8"	"19.6"	"466.1"	"471.6"	""	"502"	"14"	"33.000"	"27.000"	"0.909229926025914"	"18"	"0.0004166"	"0.002115"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEITYTPK"	"[K].vEITYTPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"704.92670"	"1408.84612"	"1408.84519"	"0.66"	"0.00046"	"7/64"	"7"	"64"	"3530897.89837646"	"HCD"	"MS2"	"12.63298"	"261.1"	"100.000"	"40.2529"	"10922"	"10922"	"10893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"435.4"	""	"393.0"	""	"395.1"	""	"338.9"	"3.9"	"462.8"	"441.6"	""	"502"	"43"	"33.000"	"27.000"	"0.0011659333408091"	"22"	"0.0001889"	"0.0006661"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLFPEGIK"	"[R].fLFPEGIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"704.93372"	"1408.86016"	"1408.86044"	"-0.21"	"-0.00014"	"12/56"	"12"	"56"	"2332722.55102539"	"HCD"	"MS2"	"45.985"	"177.3"	"100.000"	"64.5376"	"20753"	"20753"	"20729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.4"	""	"235.2"	""	"259.8"	""	"245.7"	""	"292.3"	"384.1"	""	"344"	"32"	"32.000"	"25.000"	"0.00973931577145795"	"17"	"0.0006037"	"0.00524"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLFPEGIK"	"[R].fLFPEGIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.93427"	"1408.86125"	"1408.86044"	"0.57"	"0.00040"	"9/56"	"9"	"56"	"1244786.17962646"	"HCD"	"MS2"	"100"	"102.5"	"100.000"	"64.7597"	"20897"	"20897"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.4"	""	"115.7"	""	"124.3"	""	"166.8"	""	"221.7"	"235.8"	""	"345"	"9"	"32.000"	"25.000"	"2.36477104663437"	"13"	"0.006875"	"0.2595"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVLHVGQK"	"[R].lGVLHVGQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"470.30554"	"1408.90207"	"1408.90404"	"-1.40"	"-0.00066"	"6/68"	"6"	"68"	"25099148.5982666"	"HCD"	"MS2"	"25.99644"	"527.6"	"53.419"	"36.9756"	"9536"	"9536"	"9514"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"657.7"	""	"737.1"	""	"792.3"	""	"878.7"	""	"976.4"	"958.8"	""	"93"	"32"	"26.000"	"19.000"	"0.00294071510889942"	"16"	"0.0001889"	"0.0009289"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGNANVWK"	"[K].yGNANVWk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"705.39996"	"1409.79265"	"1409.79416"	"-1.07"	"-0.00075"	"7/68"	"7"	"68"	"4452705.54852295"	"HCD"	"MS2"	"21.01026"	"410.1"	"100.000"	"38.4588"	"10145"	"10145"	"10119"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"591.9"	""	"512.9"	""	"530.8"	""	"680.8"	"0.9"	"772.4"	"798.0"	""	"846"	"43"	"36.000"	"29.000"	"0.00227164449864617"	"26"	"0.0001889"	"0.000513"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGNANVWK"	"[K].yGNANVWk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"705.40045"	"1409.79363"	"1409.79416"	"-0.38"	"-0.00026"	"7/68"	"7"	"68"	"4589710.26434326"	"HCD"	"MS2"	"7.835002"	"418.4"	"100.000"	"38.5609"	"10230"	"10230"	"10209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"603.4"	""	"515.9"	""	"565.7"	""	"690.9"	"0.7"	"787.3"	"802.2"	""	"843"	"38"	"36.000"	"29.000"	"0.0072744067147387"	"26"	"0.0001889"	"0.0006426"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIGTGSFFPK"	"[K].QVIGTGSFFPk.[G]"	"K11(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"705.40228"	"1409.79729"	"1409.79902"	"-1.23"	"-0.00086"	"7/104"	"7"	"104"	"3346533.81030273"	"HCD"	"MS2"	"4.903066"	"94.1"	"100.000"	"71.1551"	"23446"	"23446"	"23427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.2"	""	"130.4"	""	"127.3"	""	"149.9"	""	"180.7"	"207.3"	""	"819"	"53"	"36.000"	"29.000"	"0.000187609102609601"	"17"	"0.004631"	"0.1326"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIGTGSFFPK"	"[K].QVIGTGSFFPk.[G]"	"K11(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"705.40259"	"1409.79790"	"1409.79902"	"-0.79"	"-0.00056"	"7/104"	"7"	"104"	"3720020.10900879"	"HCD"	"MS2"	"4.544092"	"95.2"	"100.000"	"71.1284"	"23487"	"23487"	"23466"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.2"	""	"128.0"	""	"132.5"	""	"155.7"	"0.8"	"176.4"	"190.4"	""	"818"	"53"	"36.000"	"29.000"	"0.000183959960651355"	"17"	"0.004346"	"0.124"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFQTVQK"	"[K].sNFQTVQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"705.40997"	"1409.81267"	"1409.81529"	"-1.86"	"-0.00131"	"7/76"	"7"	"76"	"220919.427429199"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"31.9448"	"7528"	"7528"	"7498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.7"	""	"20.7"	""	"25.8"	""	"49.8"	""	"48.0"	"48.7"	""	"759"	"7"	"35.000"	"28.000"	"6.87403565149139"	"17"	"0.001058"	"0.0139"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFQTVQK"	"[K].sNFQTVQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"705.41266"	"1409.81804"	"1409.81529"	"1.95"	"0.00138"	"4/76"	"4"	"76"	"220186.260009766"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"31.7963"	"7425"	"7425"	"7398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.3"	""	"26.3"	""	"30.1"	""	"53.7"	"0.6"	"51.1"	"47.5"	""	"712"	"12"	"35.000"	"28.000"	"2.47999039023434"	"21"	"0.0003839"	"0.001773"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSQFLK"	"[R].dLTSQFLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"705.42322"	"1409.83916"	"1409.84044"	"-0.91"	"-0.00064"	"7/68"	"7"	"68"	"3134787.30181885"	"HCD"	"MS2"	"0"	"292.3"	"100.000"	"49.6870"	"14716"	"14716"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"407.2"	""	"366.4"	""	"418.2"	""	"448.9"	""	"584.8"	"546.9"	""	"531"	"45"	"34.000"	"27.000"	"0.000805498109403579"	"23"	"0.0001889"	"0.0004567"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSQFLK"	"[R].dLTSQFLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"705.42383"	"1409.84038"	"1409.84044"	"-0.04"	"-0.00003"	"7/68"	"7"	"68"	"3832739.34881592"	"HCD"	"MS2"	"4.151171"	"340.3"	"100.000"	"49.9254"	"14860"	"14860"	"14830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"464.9"	""	"451.5"	""	"469.1"	""	"532.3"	"1.0"	"675.9"	"631.7"	""	"533"	"43"	"34.000"	"27.000"	"0.00124651415153038"	"22"	"0.0001889"	"0.0005393"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINDYVSK"	"[K].lINDYVSk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"705.42450"	"1409.84172"	"1409.84044"	"0.91"	"0.00064"	"7/72"	"7"	"72"	"3032870.18951416"	"HCD"	"MS2"	"36.39169"	"293.4"	"100.000"	"44.1926"	"12477"	"12477"	"12454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"385.1"	""	"456.0"	""	"340.3"	""	"512.8"	""	"549.3"	"540.8"	""	"533"	"30"	"34.000"	"27.000"	"0.0296276505320544"	"19"	"0.0003839"	"0.001543"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEK"	"[K].vLLVPGPEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"470.64197"	"1409.91135"	"1409.91321"	"-1.32"	"-0.00062"	"9/64"	"9"	"64"	"13685250.796875"	"HCD"	"MS2"	"18.94014"	"362.1"	"100.000"	"48.6129"	"14280"	"14280"	"14255"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"399.7"	""	"466.3"	""	"464.5"	""	"671.0"	""	"701.7"	"735.2"	""	"137"	"27"	"28.000"	"21.000"	"0.0122374398877365"	"14"	"0.0001889"	"0.0008355"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEK"	"[K].vLLVPGPEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"470.64209"	"1409.91172"	"1409.91321"	"-1.06"	"-0.00050"	"9/64"	"9"	"64"	"19337814.4627686"	"HCD"	"MS2"	"10.51547"	"199.0"	"45.170"	"48.9050"	"14400"	"14400"	"14383"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.1"	""	"222.4"	""	"258.7"	""	"362.6"	""	"397.6"	"432.5"	""	"137"	"29"	"28.000"	"21.000"	"0.00888567800624009"	"14"	"0.0004166"	"0.002239"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEK"	"[K].vLLVPGPEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"705.45959"	"1409.91191"	"1409.91321"	"-0.92"	"-0.00065"	"7/64"	"7"	"64"	"44164877.3918457"	"HCD"	"MS2"	"0"	"382.8"	"19.935"	"49.1064"	"14529"	"14529"	"14511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"404.2"	""	"449.2"	""	"494.5"	""	"658.2"	""	"784.2"	"846.9"	""	"137"	"41"	"28.000"	"21.000"	"0.000551684232221361"	"16"	"0.000523"	"0.002812"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEK"	"[K].vLLVPGPEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"470.64218"	"1409.91199"	"1409.91321"	"-0.86"	"-0.00041"	"9/64"	"9"	"64"	"12143765.1585693"	"HCD"	"MS2"	"22.00136"	"319.4"	"100.000"	"48.8786"	"14436"	"14436"	"14415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"368.8"	""	"399.3"	""	"424.3"	""	"574.6"	""	"610.1"	"654.3"	""	"137"	"29"	"28.000"	"21.000"	"0.00928304747460459"	"16"	"0.0001889"	"0.0005869"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEK"	"[K].vLLVPGPEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"705.45978"	"1409.91228"	"1409.91321"	"-0.66"	"-0.00046"	"7/64"	"7"	"64"	"4511788.60150146"	"HCD"	"MS2"	"39.516"	"258.9"	"100.000"	"48.4957"	"14232"	"14232"	"14208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"318.1"	""	"363.7"	""	"349.9"	""	"423.5"	"1.0"	"495.8"	"502.9"	""	"133"	"42"	"28.000"	"21.000"	"0.000383549698155847"	"17"	"0.0005564"	"0.00364"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEK"	"[K].vLLVPGPEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"705.45978"	"1409.91228"	"1409.91321"	"-0.66"	"-0.00046"	"7/64"	"7"	"64"	"41550607.517334"	"HCD"	"MS2"	"1.26006"	"496.9"	"29.128"	"48.7922"	"14353"	"14353"	"14335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"528.5"	""	"599.7"	""	"654.5"	""	"859.3"	""	"996.0"	"1084.2"	""	"133"	"41"	"28.000"	"21.000"	"0.000533115912152806"	"16"	"0.0006037"	"0.004236"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEK"	"[K].vLLVPGPEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"470.64240"	"1409.91263"	"1409.91321"	"-0.41"	"-0.00019"	"9/64"	"9"	"64"	"21485821.3012695"	"HCD"	"MS2"	"8.596756"	"223.9"	"44.999"	"49.1779"	"14559"	"14559"	"14542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.2"	""	"261.2"	""	"296.7"	""	"390.2"	""	"457.7"	"495.1"	""	"133"	"27"	"28.000"	"21.000"	"0.0148190937426475"	"15"	"0.0001889"	"0.0006505"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEK"	"[K].vLLVPGPEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"705.46014"	"1409.91301"	"1409.91321"	"-0.14"	"-0.00010"	"7/64"	"7"	"64"	"6324802.65631104"	"HCD"	"MS2"	"31.66364"	"314.9"	"100.000"	"48.8142"	"14410"	"14410"	"14383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"390.2"	""	"411.7"	""	"422.7"	""	"553.1"	""	"614.4"	"594.5"	""	"133"	"42"	"28.000"	"21.000"	"0.000401625838535293"	"16"	"0.0006037"	"0.003909"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THAVLVALK"	"[K].tHAVLVALk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"470.64590"	"1409.92316"	"1409.92444"	"-0.91"	"-0.00043"	"12/64"	"12"	"64"	"23795493.8463135"	"HCD"	"MS2"	"8.72277"	"515.6"	"73.290"	"36.8307"	"9520"	"9520"	"9494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"719.7"	""	"788.8"	""	"832.7"	""	"805.8"	""	"910.8"	"825.7"	""	"88"	"52"	"26.000"	"19.000"	"2.49145287176831E-05"	"18"	"0.0001308"	"0.0002174"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THAVLVALK"	"[K].tHAVLVALk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"470.64615"	"1409.92389"	"1409.92444"	"-0.39"	"-0.00018"	"12/64"	"12"	"64"	"20943972.8432617"	"HCD"	"MS2"	"13.6418"	"569.2"	"95.915"	"36.7141"	"9429"	"9429"	"9402"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"821.9"	""	"879.6"	""	"914.3"	""	"862.6"	""	"978.0"	"936.4"	""	"84"	"50"	"26.000"	"19.000"	"4.31766845213119E-05"	""	"0.0001308"	"0.0002074"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWGHYFK"	"[R].dWGHYFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"470.92374"	"1410.75666"	"1410.75704"	"-0.27"	"-0.00013"	"9/48"	"9"	"48"	"9321230.43792725"	"HCD"	"MS2"	"13.14902"	"293.4"	"66.992"	"41.8040"	"11557"	"11557"	"11538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.8"	""	"350.6"	""	"406.1"	""	"496.6"	""	"525.0"	"607.0"	""	"777"	"15"	"35.000"	"28.000"	"1.24563563257037"	"19"	"0.0003839"	"0.001675"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSGQGVVK"	"[R].dYSGQGVVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"705.90314"	"1410.79900"	"1410.79930"	"-0.21"	"-0.00015"	"7/76"	"7"	"76"	"266948.243896484"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"32.4772"	"7746"	"7746"	"7718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.3"	""	"32.8"	""	"34.2"	""	"29.5"	"0.7"	"51.0"	"44.7"	""	"717"	"37"	"35.000"	"28.000"	"0.00798894001013404"	"22"	"0.0001308"	"0.0002394"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSGQGVVK"	"[R].dYSGQGVVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"705.90332"	"1410.79936"	"1410.79930"	"0.04"	"0.00003"	"7/76"	"7"	"76"	"422022.319885254"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"32.3177"	"7638"	"7638"	"7608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.3"	""	"55.7"	""	"53.7"	""	"53.2"	""	"68.8"	"73.8"	""	"713"	"45"	"35.000"	"28.000"	"0.00115095815439056"	"26"	"0"	"0.0001369"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVFGLGNK"	"[K].fAVFGLGNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"470.95425"	"1410.84821"	"1410.85094"	"-1.94"	"-0.00091"	"6/68"	"6"	"68"	"4186280.19232178"	"HCD"	"MS2"	"5.206903"	"132.6"	"100.000"	"61.0602"	"19386"	"19386"	"19363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.4"	""	"187.5"	""	"212.4"	""	"216.1"	""	"232.8"	"241.5"	""	"433"	"49"	"33.000"	"26.000"	"0.000276349002107656"	"22"	"0"	"0.0001439"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVFGLGNK"	"[K].fAVFGLGNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"705.92847"	"1410.84966"	"1410.85094"	"-0.91"	"-0.00064"	"14/68"	"14"	"68"	"3944159.11108398"	"HCD"	"MS2"	"5.928671"	"317.9"	"100.000"	"60.9821"	"19354"	"19354"	"19331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"432.0"	""	"490.1"	""	"456.2"	""	"503.7"	""	"532.7"	"595.0"	""	"419"	"41"	"33.000"	"26.000"	"0.00154947305124701"	"20"	"0.0001308"	"0.0002623"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVFGLGNK"	"[K].fAVFGLGNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"705.92865"	"1410.85002"	"1410.85094"	"-0.65"	"-0.00046"	"14/68"	"14"	"68"	"1795496.7008667"	"HCD"	"MS2"	"0"	"146.6"	"100.000"	"61.2954"	"19482"	"19482"	"19459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.4"	""	"217.4"	""	"210.6"	""	"224.9"	"2.2"	"271.7"	"276.6"	""	"412"	"42"	"33.000"	"26.000"	"0.00117995982383081"	"19"	"0"	"0.0001768"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVFGLGNK"	"[K].fAVFGLGNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"705.92932"	"1410.85137"	"1410.85094"	"0.30"	"0.00021"	"14/68"	"14"	"68"	"2042999.35656738"	"HCD"	"MS2"	"7.748098"	"179.3"	"100.000"	"61.1206"	"19357"	"19357"	"19337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.7"	""	"259.1"	""	"262.4"	""	"258.7"	"3.1"	"338.2"	"354.2"	""	"415"	"41"	"33.000"	"26.000"	"0.00174991962236087"	"19"	"0"	"0.0001083"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVFGLGNK"	"[K].fAVFGLGNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.92944"	"1410.85161"	"1410.85094"	"0.47"	"0.00033"	"6/68"	"6"	"68"	"3468211.36602783"	"HCD"	"MS2"	"55.04731"	"278.9"	"100.000"	"60.8255"	"19237"	"19237"	"19209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.5"	""	"398.2"	""	"398.3"	""	"449.2"	"5.7"	"508.6"	"509.0"	""	"415"	"33"	"33.000"	"26.000"	"0.010965238974335"	"15"	"0.0001889"	"0.0004234"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVFGLGNK"	"[K].fAVFGLGNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"470.95541"	"1410.85169"	"1410.85094"	"0.53"	"0.00025"	"7/68"	"7"	"68"	"4132374.70019531"	"HCD"	"MS2"	"5.050823"	"124.1"	"100.000"	"60.9015"	"19268"	"19268"	"19241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.8"	""	"183.6"	""	"200.5"	""	"188.5"	"0.6"	"212.4"	"224.2"	""	"415"	"43"	"33.000"	"26.000"	"0.000961652358452797"	"17"	"7.476E-05"	"0.0001874"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPVIAK"	"[K].vNIVPVIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"705.97473"	"1410.94219"	"1410.94484"	"-1.88"	"-0.00133"	"8/80"	"8"	"80"	"2436268.87860107"	"HCD"	"MS2"	"0"	"146.6"	"100.000"	"53.6240"	"16303"	"16303"	"16291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.2"	""	"183.0"	"2.3"	"221.6"	""	"241.8"	""	"278.1"	"290.9"	""	"73"	"42"	"25.000"	"18.000"	"0.000210519759138171"	""	"0.0001859"	"0.0003474"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPVIAK"	"[K].vNIVPVIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"470.98563"	"1410.94233"	"1410.94484"	"-1.78"	"-0.00084"	"9/80"	"9"	"80"	"6720322.58074951"	"HCD"	"MS2"	"12.1843"	"233.3"	"100.000"	"52.9906"	"16061"	"16061"	"16034"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.6"	""	"327.6"	""	"328.3"	""	"401.5"	"0.1"	"432.6"	"430.3"	""	"73"	"29"	"25.000"	"18.000"	"0.00416191172459826"	"15"	"0.0001889"	"0.0007404"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPVIAK"	"[K].vNIVPVIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"705.97491"	"1410.94255"	"1410.94484"	"-1.62"	"-0.00115"	"8/80"	"8"	"80"	"3037382.02209473"	"HCD"	"MS2"	"0"	"184.8"	"100.000"	"53.3906"	"16270"	"16270"	"16258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.2"	""	"250.2"	""	"262.5"	""	"298.3"	""	"332.6"	"357.7"	""	"73"	"42"	"25.000"	"18.000"	"0.000227139604086743"	""	"0.0001859"	"0.0003434"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPVIAK"	"[K].vNIVPVIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"470.98578"	"1410.94278"	"1410.94484"	"-1.46"	"-0.00069"	"9/80"	"9"	"80"	"6761617.95513916"	"HCD"	"MS2"	"26.44415"	"233.7"	"100.000"	"53.1845"	"16190"	"16190"	"16166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.2"	""	"305.1"	""	"353.5"	""	"392.0"	""	"420.0"	"428.9"	""	"73"	"33"	"25.000"	"18.000"	"0.00195115991179895"	"16"	"0.0001889"	"0.0005682"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPVIAK"	"[K].vNIVPVIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"705.97516"	"1410.94304"	"1410.94484"	"-1.28"	"-0.00090"	"8/80"	"8"	"80"	"9189343.62359619"	"HCD"	"MS2"	"0"	"478.0"	"100.000"	"52.9769"	"16055"	"16055"	"16034"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"660.7"	""	"656.9"	""	"681.1"	""	"793.6"	""	"832.5"	"902.1"	""	"69"	"41"	"25.000"	"18.000"	"0.000253407284514204"	""	"0.0001889"	"0.0007195"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPVIAK"	"[K].vNIVPVIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.97522"	"1410.94316"	"1410.94484"	"-1.19"	"-0.00084"	"8/80"	"8"	"80"	"2557314.00457764"	"HCD"	"MS2"	"100"	"157.1"	"100.000"	"53.4753"	"16303"	"16303"	"16288"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"215.1"	""	"204.1"	"2.7"	"222.8"	""	"257.2"	""	"297.8"	"289.9"	""	"69"	"28"	"25.000"	"18.000"	"0.00536808142903751"	"14"	"0.0001308"	"0.0002539"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPVIAK"	"[K].vNIVPVIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"705.97522"	"1410.94316"	"1410.94484"	"-1.19"	"-0.00084"	"7/80"	"7"	"80"	"8892656.06176758"	"HCD"	"MS2"	"19.70382"	"461.3"	"99.214"	"53.1707"	"16184"	"16184"	"16166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"632.9"	""	"607.2"	""	"672.6"	""	"777.8"	"2.4"	"814.9"	"861.2"	""	"69"	"46"	"25.000"	"18.000"	"9.54594867666971E-05"	""	"0.0001889"	"0.0005815"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPVIAK"	"[K].vNIVPVIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"705.97528"	"1410.94328"	"1410.94484"	"-1.10"	"-0.00078"	"8/80"	"8"	"80"	"2358267.08111572"	"HCD"	"MS2"	"20.29519"	"140.7"	"100.000"	"53.8166"	"16434"	"16434"	"16425"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.2"	""	"186.8"	""	"206.4"	""	"233.4"	""	"262.7"	"269.5"	""	"69"	"43"	"25.000"	"18.000"	"0.000186131164767719"	""	"0.0001859"	"0.0003346"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPVIAK"	"[K].vNIVPVIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"705.97595"	"1410.94463"	"1410.94484"	"-0.15"	"-0.00011"	"8/80"	"8"	"80"	"2805066.46826172"	"HCD"	"MS2"	"24.62367"	"172.9"	"100.000"	"53.2667"	"16166"	"16166"	"16160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"239.5"	""	"227.4"	""	"250.2"	""	"294.1"	"1.1"	"299.0"	"325.7"	""	"69"	"45"	"25.000"	"18.000"	"0.000103471106905074"	""	"0.0001308"	"0.0003016"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIIWSPVCR"	"[K].yIIWSPVcR.[N]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"706.37457"	"1411.74187"	"1411.74276"	"-0.63"	"-0.00045"	"5/64"	"5"	"64"	"1421708.9420166"	"HCD"	"MS2"	"33.54247"	"74.3"	"100.000"	"69.3475"	"22709"	"22709"	"22682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.9"	""	"115.2"	""	"125.3"	""	"109.0"	"1.9"	"97.5"	"108.1"	""	"742"	"19"	"35.000"	"28.000"	"0.420120534760392"	"22"	"0.0006037"	"0.005427"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDFVFYAPR"	"[K].aPDFVFYAPR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"471.25681"	"1411.75586"	"1411.75715"	"-0.91"	"-0.00043"	"11/72"	"11"	"72"	"7123964.39556885"	"HCD"	"MS2"	"4.793158"	"55.2"	"100.000"	"56.5000"	"17528"	"17528"	"17509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.6"	""	"65.5"	""	"73.0"	""	"99.5"	""	"107.6"	"110.5"	""	"781"	"33"	"35.000"	"28.000"	"0.0192141438683607"	"19"	"0.0001889"	"0.0006519"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDFVFYAPR"	"[K].aPDFVFYAPR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"706.38202"	"1411.75676"	"1411.75715"	"-0.28"	"-0.00020"	"7/72"	"7"	"72"	"14649793.9528198"	"HCD"	"MS2"	"16.31674"	"456.8"	"82.744"	"56.3826"	"17480"	"17480"	"17461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"611.9"	""	"614.8"	""	"613.5"	""	"741.3"	"3.1"	"860.7"	"885.4"	""	"784"	"31"	"35.000"	"28.000"	"0.0343784321888305"	"15"	"0.0001308"	"0.0002443"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDFVFYAPR"	"[K].aPDFVFYAPR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"471.25720"	"1411.75705"	"1411.75715"	"-0.07"	"-0.00003"	"11/72"	"11"	"72"	"6766279.55718994"	"HCD"	"MS2"	"6.61444"	"55.1"	"100.000"	"56.3086"	"17396"	"17396"	"17371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.8"	""	"69.0"	""	"72.5"	""	"93.4"	"0.2"	"112.2"	"109.9"	""	"768"	"34"	"35.000"	"28.000"	"0.014700470143366"	"24"	"0.0001889"	"0.0006221"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDFVFYAPR"	"[K].aPDFVFYAPR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"706.38226"	"1411.75725"	"1411.75715"	"0.07"	"0.00005"	"7/72"	"7"	"72"	"8813882.25567627"	"HCD"	"MS2"	"4.827622"	"268.3"	"79.241"	"56.6893"	"17606"	"17606"	"17589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.6"	""	"351.2"	""	"363.2"	""	"432.0"	""	"499.7"	"556.7"	""	"770"	"31"	"35.000"	"28.000"	"0.0290710507651192"	"18"	"0"	"0.0001471"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDFVFYAPR"	"[K].aPDFVFYAPR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.38245"	"1411.75762"	"1411.75715"	"0.33"	"0.00023"	"7/72"	"7"	"72"	"12805087.6617432"	"HCD"	"MS2"	"21.49524"	"507.0"	"100.000"	"56.1747"	"17341"	"17341"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"664.0"	""	"677.6"	""	"690.0"	""	"857.2"	""	"936.7"	"984.0"	""	"780"	"31"	"35.000"	"28.000"	"0.03467884359646"	"15"	"0"	"0.0001709"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDFVFYAPR"	"[K].aPDFVFYAPR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.38263"	"1411.75798"	"1411.75715"	"0.59"	"0.00041"	"7/72"	"7"	"72"	"8856542.12231445"	"HCD"	"MS2"	"4.104474"	"267.7"	"79.198"	"56.4885"	"17469"	"17469"	"17451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"345.0"	""	"362.3"	""	"357.0"	""	"451.2"	""	"495.0"	"530.6"	""	"778"	"31"	"35.000"	"28.000"	"0.0285725894713118"	"14"	"0.0001308"	"0.0002271"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"706.39496"	"1411.78264"	"1411.78332"	"-0.48"	"-0.00034"	"14/74"	"14"	"74"	"1011949.04833984"	"HCD"	"MS2"	"7.916678"	"99.1"	"100.000"	"32.8308"	"7891"	"7891"	"7862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.7"	""	"128.8"	""	"142.7"	""	"141.3"	""	"210.3"	"186.2"	""	"696"	"54"	"35.000"	"28.000"	"0.000132610906541033"	""	"0"	"4.636E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGHPAPSFK"	"[K].iGHPAPSFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.42609"	"1411.84490"	"1411.84619"	"-0.92"	"-0.00065"	"7/64"	"7"	"64"	"1605538.66503906"	"HCD"	"MS2"	"0"	"102.1"	"100.000"	"32.0232"	"7518"	"7518"	"7490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.0"	""	"111.7"	"2.8"	"151.8"	""	"174.5"	"3.7"	"190.7"	"168.5"	""	"458"	"26"	"33.000"	"26.000"	"0.0602331370144042"	"14"	"0.0001889"	"0.000662"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGHPAPSFK"	"[K].iGHPAPSFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.28653"	"1411.84504"	"1411.84619"	"-0.82"	"-0.00039"	"6/64"	"6"	"64"	"5538638.39245605"	"HCD"	"MS2"	"7.341034"	"251.4"	"100.000"	"32.4220"	"7723"	"7723"	"7702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"346.1"	""	"313.3"	""	"371.2"	""	"420.5"	"0.9"	"489.2"	"440.8"	""	"457"	"32"	"33.000"	"26.000"	"0.0145507776527459"	"14"	"0.0001889"	"0.0004302"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGHPAPSFK"	"[K].iGHPAPSFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.42627"	"1411.84526"	"1411.84619"	"-0.66"	"-0.00046"	"6/64"	"6"	"64"	"2063627.89135742"	"HCD"	"MS2"	"0"	"122.6"	"100.000"	"32.1281"	"7603"	"7603"	"7578"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"189.7"	""	"143.4"	""	"182.6"	""	"203.5"	""	"223.9"	"219.1"	""	"453"	"25"	"33.000"	"26.000"	"0.0714608547194353"	"14"	"0.0001889"	"0.0008524"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGHPAPSFK"	"[K].iGHPAPSFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.28662"	"1411.84531"	"1411.84619"	"-0.62"	"-0.00029"	"6/64"	"6"	"64"	"98069805.6281738"	"HCD"	"MS2"	"37.79414"	"920.9"	"26.162"	"32.0365"	"7565"	"7565"	"7546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1341.1"	""	"1149.9"	""	"1337.5"	""	"1662.7"	""	"1683.5"	"1551.5"	""	"457"	"29"	"33.000"	"26.000"	"0.0282413988542071"	"14"	"0.0001889"	"0.0007967"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGHPAPSFK"	"[K].iGHPAPSFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.28665"	"1411.84540"	"1411.84619"	"-0.56"	"-0.00026"	"6/64"	"6"	"64"	"111666358.940186"	"HCD"	"MS2"	"19.81203"	"745.0"	"19.451"	"31.9180"	"7475"	"7475"	"7460"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1070.4"	""	"874.5"	""	"1092.7"	""	"1347.2"	""	"1387.0"	"1288.4"	""	"459"	"29"	"33.000"	"26.000"	"0.025869181619228"	"14"	"0.0002277"	"0.001224"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGHPAPSFK"	"[K].iGHPAPSFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.28671"	"1411.84558"	"1411.84619"	"-0.43"	"-0.00020"	"6/64"	"6"	"64"	"5594735.03057861"	"HCD"	"MS2"	"5.854784"	"232.8"	"100.000"	"32.2901"	"7626"	"7626"	"7608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.5"	""	"279.1"	""	"346.3"	""	"393.3"	"2.8"	"443.5"	"416.5"	""	"459"	"28"	"33.000"	"26.000"	"0.0386173697015673"	"14"	"0.0001889"	"0.0004454"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAVPETLK"	"[K].vPAVPETLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.44934"	"1411.89141"	"1411.89247"	"-0.76"	"-0.00053"	"8/66"	"8"	"66"	"5532159.04797363"	"HCD"	"MS2"	"21.50598"	"419.7"	"100.000"	"43.9237"	"12367"	"12367"	"12342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"530.7"	""	"553.5"	""	"575.8"	""	"726.4"	""	"814.4"	"787.9"	""	"225"	"44"	"30.000"	"23.000"	"0.000438684735011111"	"15"	"0.0006037"	"0.004449"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAVPETLK"	"[K].vPAVPETLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.44940"	"1411.89153"	"1411.89247"	"-0.67"	"-0.00047"	"8/66"	"8"	"66"	"6142927.90704346"	"HCD"	"MS2"	"41.89188"	"487.9"	"100.000"	"44.2082"	"12533"	"12533"	"12508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"636.1"	""	"674.6"	""	"649.7"	""	"838.5"	""	"936.5"	"895.6"	""	"225"	"31"	"30.000"	"23.000"	"0.00879331280161871"	"14"	"0.0008731"	"0.008991"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPGELAK"	"[R].lLLPGELAk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q00715"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"471.31372"	"1411.92661"	"1411.92886"	"-1.59"	"-0.00075"	"10/64"	"10"	"64"	"8182040.92407227"	"HCD"	"MS2"	"1.261681"	"244.8"	"100.000"	"59.3762"	"18698"	"18698"	"18677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.5"	""	"206.6"	""	"205.7"	""	"459.5"	""	"675.0"	"643.3"	""	"126"	"29"	"27.000"	"21.000"	"0.00784044205415973"	"21"	"0.0003839"	"0.001952"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPGELAK"	"[R].lLLPGELAk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q00715"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.6481"	"0.0000"	"1"	"1"	"1"	"706.46698"	"1411.92668"	"1411.92886"	"-1.54"	"-0.00109"	"8/64"	"8"	"64"	"6898645.94268799"	"HCD"	"MS2"	"28.54682"	"343.6"	"100.000"	"59.0826"	"18525"	"18525"	"18505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"288.3"	""	"333.4"	""	"301.5"	""	"665.2"	"3.6"	"868.2"	"816.3"	""	"126"	"54"	"27.000"	"21.000"	"2.50230676165748E-05"	""	"0.0005564"	"0.003624"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPGELAK"	"[R].lLLPGELAk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q00715"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.6140"	"0.0000"	"1"	"1"	"1"	"706.46729"	"1411.92729"	"1411.92886"	"-1.11"	"-0.00078"	"8/64"	"8"	"64"	"9022266.02606201"	"HCD"	"MS2"	"4.305844"	"440.0"	"100.000"	"59.2563"	"18649"	"18649"	"18629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"353.7"	""	"399.7"	""	"390.3"	""	"839.2"	""	"1152.9"	"1065.1"	""	"122"	"57"	"27.000"	"20.000"	"1.33453459060923E-05"	""	"0.0001308"	"0.0002872"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPGELAK"	"[R].lLLPGELAk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q00715"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"706.46777"	"1411.92827"	"1411.92886"	"-0.42"	"-0.00029"	"8/64"	"8"	"64"	"27361847.2819824"	"HCD"	"MS2"	"10.19664"	"378.7"	"27.885"	"59.5608"	"18774"	"18774"	"18757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"285.1"	""	"307.9"	""	"305.6"	""	"648.8"	"2.2"	"1044.7"	"1025.4"	""	"127"	"42"	"28.000"	"21.000"	"0.000403435141725857"	""	"0.0003146"	"0.001469"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPGELAK"	"[R].lLLPGELAk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q00715"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"3"	"3"	"0.7292"	"0.0000"	"1"	"1"	"1"	"471.31442"	"1411.92871"	"1411.92886"	"-0.10"	"-0.00005"	"11/64"	"11"	"64"	"9815079.1887207"	"HCD"	"MS2"	"11.74058"	"281.4"	"100.000"	"59.2128"	"18578"	"18578"	"18553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.1"	""	"229.8"	""	"229.6"	""	"524.3"	""	"768.4"	"724.3"	""	"127"	"48"	"28.000"	"21.000"	"0.000111628149486377"	""	"0.0001889"	"0.0005131"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPGELAK"	"[R].lLLPGELAk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q00715"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.6140"	"0.0000"	"1"	"1"	"1"	"706.46826"	"1411.92925"	"1411.92886"	"0.28"	"0.00019"	"8/64"	"8"	"64"	"32615051.3586426"	"HCD"	"MS2"	"8.958517"	"371.9"	"22.314"	"59.3881"	"18650"	"18650"	"18633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"272.9"	""	"303.6"	""	"314.0"	""	"650.8"	"0.4"	"1012.3"	"1000.1"	""	"126"	"57"	"27.000"	"21.000"	"1.33456751520656E-05"	""	"0.0001889"	"0.0007938"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVmmGPYR.[Q]"	"N-Term(TMT6plex); M5(Oxidation); M6(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"706.86414"	"1412.72099"	"1412.72276"	"-1.25"	"-0.00088"	"8/88"	"8"	"88"	"777087.923339844"	"HCD"	"MS2"	"0"	"32.1"	"100.000"	"33.7884"	"8233"	"8233"	"8204"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.4"	""	"48.7"	""	"44.6"	""	"49.7"	"0.2"	"57.2"	"57.4"	""	"622"	"23"	"34.000"	"27.000"	"0.141175842778213"	""	"0.003507"	"0.08191"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVmmGPYR.[Q]"	"N-Term(TMT6plex); M5(Oxidation); M6(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"706.86444"	"1412.72161"	"1412.72276"	"-0.82"	"-0.00058"	"7/88"	"7"	"88"	"738077.000366211"	"HCD"	"MS2"	"34.81752"	"42.2"	"100.000"	"33.8663"	"8308"	"8308"	"8282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.1"	""	"65.2"	""	"65.0"	""	"61.5"	""	"74.9"	"82.6"	""	"617"	"12"	"34.000"	"27.000"	"1.75895677998611"	"18"	"0.003762"	"0.08783"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMDAVSPPQI"	"[K].iLMDAVSPPQI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC2"	"Immunity-related GTPase family M protein OS=Rattus norvegicus OX=10116 GN=Irgm PE=2 SV=1"	"Q6AYC2"	"Immunity-related GTPase family M protein OS=Rattus norvegicus OX=10116 GN=Irgm PE=2 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"706.90448"	"1412.80168"	"1412.80205"	"-0.26"	"-0.00019"	"7/86"	"7"	"86"	"338573.398010254"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"79.0944"	"26727"	"26727"	"26703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"14.3"	""	"19.1"	""	"21.9"	""	"32.6"	"28.8"	""	"611"	"41"	"34.000"	"27.000"	"0.00217275728421092"	"24"	"0.0001889"	"0.000602"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFVGGNWK"	"[K].fFVGGNWk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"471.60745"	"1412.80780"	"1412.80908"	"-0.90"	"-0.00042"	"6/62"	"6"	"62"	"3411815.12780762"	"HCD"	"MS2"	"43.92381"	"142.3"	"100.000"	"58.5244"	"18356"	"18356"	"18325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.4"	""	"179.2"	""	"217.6"	""	"242.9"	"1.1"	"250.3"	"291.2"	""	"579"	"32"	"34.000"	"27.000"	"0.0191270753198199"	"15"	"0.0006037"	"0.004454"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFVGGNWK"	"[K].fFVGGNWk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"706.90765"	"1412.80803"	"1412.80908"	"-0.74"	"-0.00052"	"12/62"	"12"	"62"	"8834338.26416016"	"HCD"	"MS2"	"1.710123"	"696.1"	"100.000"	"58.6528"	"18408"	"18408"	"18389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"883.6"	""	"782.6"	""	"1019.7"	""	"1110.4"	"8.2"	"1224.0"	"1572.9"	""	"577"	"31"	"34.000"	"27.000"	"0.0227062710327036"	"24"	"0.0002277"	"0.001325"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFVGGNWK"	"[K].fFVGGNWk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"471.60754"	"1412.80808"	"1412.80908"	"-0.71"	"-0.00033"	"6/62"	"6"	"62"	"3522003.20684814"	"HCD"	"MS2"	"0"	"144.3"	"100.000"	"58.4495"	"18271"	"18271"	"18250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.6"	""	"167.3"	""	"206.2"	""	"235.3"	"1.9"	"281.2"	"307.9"	""	"577"	"39"	"34.000"	"27.000"	"0.00369101506249446"	"17"	"0.0005564"	"0.003295"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVIPGMFK"	"[K].yVIPGMFk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"706.92206"	"1412.83684"	"1412.83760"	"-0.54"	"-0.00038"	"7/58"	"7"	"58"	"3747524.0411377"	"HCD"	"MS2"	"26.89273"	"249.3"	"100.000"	"59.8459"	"18890"	"18890"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"364.8"	""	"338.6"	""	"340.4"	""	"314.4"	""	"485.5"	"521.1"	""	"498"	"38"	"33.000"	"26.000"	"0.00441773180741652"	"18"	"0.00103"	"0.01184"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVIPGMFK"	"[K].yVIPGMFk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"706.92328"	"1412.83928"	"1412.83760"	"1.19"	"0.00084"	"6/58"	"6"	"58"	"3757066.21038818"	"HCD"	"MS2"	"49.57473"	"257.8"	"100.000"	"59.6758"	"18767"	"18767"	"18745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"374.9"	""	"348.1"	""	"344.9"	""	"328.8"	""	"524.5"	"525.3"	""	"489"	"29"	"33.000"	"26.000"	"0.0326045990163933"	"17"	"0.001966"	"0.03061"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVFQNYR"	"[R].kVFQNYR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"471.61798"	"1412.83939"	"1412.84144"	"-1.45"	"-0.00068"	"5/62"	"5"	"62"	"57728057.0181885"	"HCD"	"MS2"	"14.80215"	"1432.7"	"39.475"	"29.5424"	"6545"	"6545"	"6528"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2315.2"	""	"2109.6"	""	"2174.1"	""	"2145.8"	"5.5"	"2339.5"	"2457.6"	""	"489"	"4"	"33.000"	"26.000"	"8.87725843912898"	"14"	"0.00274"	"0.04321"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVFQNYR"	"[R].kVFQNYR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.92340"	"1412.83953"	"1412.84144"	"-1.36"	"-0.00096"	"11/62"	"11"	"62"	"4138808.66088867"	"HCD"	"MS2"	"0"	"250.5"	"100.000"	"29.5376"	"6543"	"6543"	"6516"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"433.2"	""	"358.9"	""	"394.5"	""	"360.9"	""	"393.7"	"428.5"	""	"487"	"10"	"33.000"	"26.000"	"2.2882262612249"	"13"	"0.007595"	"0.3015"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVFQNYR"	"[R].kVFQNYR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.61826"	"1412.84021"	"1412.84144"	"-0.87"	"-0.00041"	"5/62"	"5"	"62"	"86044960.1623535"	"HCD"	"MS2"	"9.754955"	"978.1"	"19.459"	"29.5003"	"6486"	"6486"	"6468"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1586.2"	""	"1425.6"	""	"1515.6"	""	"1461.4"	"1.6"	"1611.7"	"1646.5"	""	"487"	"5"	"33.000"	"26.000"	"8.60001018443415"	"13"	"0.003107"	"0.06149"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVFQNYR"	"[R].kVFQNYR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.92401"	"1412.84075"	"1412.84144"	"-0.49"	"-0.00035"	"11/62"	"11"	"62"	"3703696.44012451"	"HCD"	"MS2"	"0"	"226.9"	"100.000"	"29.4729"	"6475"	"6475"	"6454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.9"	""	"323.7"	""	"343.7"	""	"331.9"	""	"367.5"	"377.8"	""	"489"	"10"	"33.000"	"26.000"	"2.25568713939339"	"13"	"0.008678"	"0.3809"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPIWGTLIR"	"[R].dIPIWGTLIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"706.92548"	"1412.84368"	"1412.84630"	"-1.86"	"-0.00131"	"8/84"	"8"	"84"	"1235029.25384521"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"72.7559"	"24152"	"24152"	"24127"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.4"	""	"65.5"	""	"83.1"	""	"107.1"	"0.6"	"100.8"	"112.7"	""	"463"	"40"	"33.000"	"26.000"	"0.0022623041665127"	"25"	"0.0001889"	"0.0004485"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPIWGTLIR"	"[R].dIPIWGTLIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"706.92627"	"1412.84526"	"1412.84630"	"-0.74"	"-0.00052"	"7/84"	"7"	"84"	"1389073.43566895"	"HCD"	"MS2"	"18.74566"	"66.6"	"100.000"	"72.8062"	"24121"	"24121"	"24097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.5"	""	"87.9"	""	"94.4"	""	"120.3"	"3.4"	"109.4"	"142.3"	""	"458"	"40"	"33.000"	"26.000"	"0.00211755881831853"	""	"0"	"8.456E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPIWGTLIR"	"[R].dIPIWGTLIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"706.92657"	"1412.84587"	"1412.84630"	"-0.30"	"-0.00021"	"8/84"	"8"	"84"	"3088151.22650146"	"HCD"	"MS2"	"0.9514422"	"116.7"	"100.000"	"73.1015"	"24242"	"24242"	"24225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.3"	""	"139.8"	""	"141.8"	""	"244.6"	"2.2"	"202.8"	"243.2"	""	"446"	"47"	"33.000"	"26.000"	"0.000474575007254145"	"26"	"0"	"7.625E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPIWGTLIR"	"[R].dIPIWGTLIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"2"	"2"	"0.8070"	"0.0000"	"1"	"1"	"1"	"706.92676"	"1412.84624"	"1412.84630"	"-0.04"	"-0.00003"	"8/84"	"8"	"84"	"3747712.23016357"	"HCD"	"MS2"	"0"	"140.1"	"100.000"	"73.0489"	"24272"	"24272"	"24255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.7"	""	"170.8"	""	"183.1"	""	"294.5"	"0.2"	"242.4"	"280.6"	""	"445"	"57"	"33.000"	"26.000"	"4.77892280494044E-05"	""	"0"	"6.077E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQTTAPPVK"	"[K].iQTTAPPVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"706.94611"	"1412.88494"	"1412.88772"	"-1.97"	"-0.00139"	"7/80"	"7"	"80"	"1387702.82958984"	"HCD"	"MS2"	"0"	"95.3"	"100.000"	"35.1252"	"8777"	"8777"	"8750"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.3"	""	"142.4"	""	"123.7"	""	"144.0"	""	"179.4"	"184.3"	""	"248"	"47"	"30.000"	"23.000"	"0.000250854378156106"	"23"	"0.0001889"	"0.0005377"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQTTAPPVK"	"[K].iQTTAPPVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"706.94745"	"1412.88762"	"1412.88772"	"-0.07"	"-0.00005"	"8/80"	"8"	"80"	"1237743.95111084"	"HCD"	"MS2"	"0"	"82.2"	"100.000"	"35.1712"	"8839"	"8839"	"8810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.2"	""	"114.9"	""	"119.2"	""	"120.7"	""	"163.1"	"154.6"	""	"250"	"40"	"30.000"	"23.000"	"0.0011800760953574"	""	"0.0001889"	"0.0006336"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHIPFISK"	"[R].iHIPFISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.63913"	"1412.90284"	"1412.90298"	"-0.10"	"-0.00005"	"8/56"	"8"	"56"	"4483932.44451904"	"HCD"	"MS2"	"28.13393"	"144.1"	"100.000"	"54.5276"	"16668"	"16668"	"16640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.6"	""	"194.2"	""	"204.0"	""	"231.3"	""	"240.3"	"260.5"	""	"173"	"18"	"29.000"	"22.000"	"0.140609967372417"	"14"	"0.0009727"	"0.01032"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHIPFISK"	"[R].iHIPFISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.63931"	"1412.90338"	"1412.90298"	"0.29"	"0.00014"	"8/56"	"8"	"56"	"5316166.81787109"	"HCD"	"MS2"	"48.32259"	"176.5"	"100.000"	"54.7547"	"16814"	"16814"	"16789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.0"	""	"246.0"	""	"240.7"	""	"286.1"	""	"302.1"	"303.6"	""	"173"	"16"	"29.000"	"22.000"	"0.195441194124115"	"14"	"0.00175"	"0.02459"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SISEWFTSMP"	"[K].sISEWFTSMP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.34943"	"1413.69158"	"1413.69217"	"-0.42"	"-0.00030"	"5/88"	"5"	"88"	"225214.607849121"	"HCD"	"MS2"	"19.08455"	"11.7"	"100.000"	"86.2653"	"29644"	"29644"	"29622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.0"	""	"20.3"	""	"16.6"	""	"17.8"	""	"21.6"	"21.5"	""	"502"	"27"	"33.000"	"27.000"	"0.0532934359962055"	"14"	"0.003107"	"0.06075"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SISEWFTSMP"	"[K].sISEWFTSMP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.34961"	"1413.69194"	"1413.69217"	"-0.16"	"-0.00011"	"5/88"	"5"	"88"	"450068.228027344"	"HCD"	"MS2"	"20.68582"	"11.2"	"100.000"	"85.9534"	"29518"	"29518"	"29497"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.3"	""	"14.7"	""	"14.6"	""	"16.1"	""	"23.9"	"24.6"	""	"502"	"28"	"33.000"	"27.000"	"0.0385188862682623"	"15"	"0.0006037"	"0.004107"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SISEWFTSMP"	"[K].sISEWFTSMP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.34973"	"1413.69219"	"1413.69217"	"0.01"	"0.00001"	"8/88"	"8"	"88"	"431994.341491699"	"HCD"	"MS2"	"9.206017"	"11.5"	"100.000"	"85.9179"	"29452"	"29452"	"29432"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.1"	""	"14.3"	""	"19.4"	""	"16.9"	""	"20.6"	"23.6"	""	"501"	"32"	"33.000"	"26.000"	"0.0175714552254203"	"14"	"0.0001889"	"0.0008313"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMILDICTR"	"[K].sSMILDIcTR.[Y]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9815"	"0.0000"	"1"	"1"	"1"	"707.35767"	"1413.70806"	"1413.71014"	"-1.48"	"-0.00104"	"8/88"	"8"	"88"	"2184824.55383301"	"HCD"	"MS2"	"14.98388"	"128.7"	"100.000"	"66.5446"	"21625"	"21625"	"21603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"236.0"	""	"231.7"	""	"167.0"	""	"153.0"	""	"202.4"	"226.8"	""	"580"	"54"	"34.000"	"27.000"	"0.00012399323698396"	"17"	"0"	"3.48E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMILDICTR"	"[K].sSMILDIcTR.[Y]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"707.35870"	"1413.71013"	"1413.71014"	"-0.01"	"-0.00001"	"7/88"	"7"	"88"	"1950263.52581787"	"HCD"	"MS2"	"17.22509"	"127.2"	"100.000"	"66.6006"	"21595"	"21595"	"21577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"258.7"	""	"222.5"	""	"159.3"	""	"148.6"	"3.7"	"205.0"	"203.6"	""	"581"	"43"	"34.000"	"27.000"	"0.00158178020650723"	"17"	"0"	"5.457E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLSSMQGWR"	"[R].yGLSSMQGWR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"P20650; P35815"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1; Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.36035"	"1413.71343"	"1413.71464"	"-0.86"	"-0.00060"	"8/80"	"8"	"80"	"1664831.12078857"	"HCD"	"MS2"	"0"	"124.2"	"100.000"	"45.0666"	"12882"	"12882"	"12859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.3"	""	"196.7"	""	"194.1"	""	"135.1"	"5.0"	"209.8"	"228.7"	""	"592"	"45"	"34.000"	"27.000"	"0.00103345533381662"	"15"	"0"	"8.43E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLSSMQGWR"	"[R].yGLSSMQGWR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"P20650; P35815"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1; Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.36053"	"1413.71379"	"1413.71464"	"-0.60"	"-0.00042"	"8/80"	"8"	"80"	"1794579.18054199"	"HCD"	"MS2"	"0"	"127.3"	"100.000"	"44.8070"	"12727"	"12727"	"12704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.2"	""	"187.7"	""	"199.6"	""	"151.4"	"3.4"	"220.3"	"247.4"	""	"595"	"47"	"34.000"	"27.000"	"0.000550157414145979"	"15"	"0"	"6.742E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDVMFGGK"	"[R].tTDVMFGGk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.39313"	"1413.77898"	"1413.78121"	"-1.58"	"-0.00111"	"8/68"	"8"	"68"	"2517029.15966797"	"HCD"	"MS2"	"57.37308"	"191.3"	"100.000"	"40.9604"	"11212"	"11212"	"11181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.2"	""	"270.8"	""	"288.3"	""	"273.0"	""	"346.7"	"343.4"	""	"709"	"21"	"35.000"	"28.000"	"0.287485695009186"	"14"	"7.476E-05"	"0.0001921"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDVMFGGK"	"[R].tTDVMFGGk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.39484"	"1413.78240"	"1413.78121"	"0.84"	"0.00059"	"10/68"	"10"	"68"	"3131168.18029785"	"HCD"	"MS2"	"62.4013"	"199.7"	"100.000"	"40.8090"	"11106"	"11106"	"11077"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.3"	""	"269.5"	""	"265.9"	""	"306.4"	""	"402.5"	"403.1"	""	"699"	"6"	"35.000"	"28.000"	"7.84236732362076"	"13"	"0.0001889"	"0.0004704"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAFDFTK"	"[R].qVAFDFTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"707.41046"	"1413.81365"	"1413.81422"	"-0.41"	"-0.00029"	"14/74"	"14"	"74"	"2755751.50476074"	"HCD"	"MS2"	"3.349961"	"249.4"	"100.000"	"49.1144"	"14485"	"14485"	"14463"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.8"	""	"314.1"	""	"315.6"	""	"421.1"	""	"489.8"	"496.6"	""	"657"	"51"	"35.000"	"28.000"	"0.000290760477829429"	"27"	"0.0001308"	"0.0002934"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAFDFTK"	"[R].qVAFDFTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"707.41132"	"1413.81536"	"1413.81422"	"0.80"	"0.00057"	"14/74"	"14"	"74"	"2932779.7088623"	"HCD"	"MS2"	"2.805471"	"259.7"	"100.000"	"49.3895"	"14645"	"14645"	"14622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"348.4"	""	"328.4"	""	"324.3"	""	"420.3"	"1.9"	"509.5"	"531.4"	""	"660"	"51"	"35.000"	"28.000"	"0.000293436368893123"	"27"	"0.0001859"	"0.0003531"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVYQAMK"	"[R].lSVYQAmk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"707.41138"	"1413.81548"	"1413.81759"	"-1.50"	"-0.00106"	"7/62"	"7"	"62"	"999886.317108154"	"HCD"	"MS2"	"0"	"98.5"	"100.000"	"37.1132"	"9593"	"9593"	"9562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.2"	""	"140.3"	""	"139.8"	""	"153.4"	"4.4"	"166.5"	"167.1"	""	"660"	"22"	"35.000"	"28.000"	"0.228304220403249"	"18"	"0.001817"	"0.02514"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VEWVNALILK"	"[R].VEWVNALILk.[H]"	"K10(TMT6plex)"	"1"	"1"	"Q07977"	"Alpha-2,8-sialyltransferase 8B OS=Rattus norvegicus OX=10116 GN=St8sia2 PE=2 SV=1"	"Q07977"	"Alpha-2,8-sialyltransferase 8B OS=Rattus norvegicus OX=10116 GN=St8sia2 PE=2 SV=1"	"0"	"2"	"2"	"0.0500"	"0.0000"	"1"	"1"	"1"	"707.42322"	"1413.83916"	"1413.86670"	"-19.48"	"-0.01377"	"4/82"	"4"	"82"	"107615.369262695"	"HCD"	"MS2"	"22.4028"	"5.6"	"100.000"	"92.2539"	"31852"	"31852"	"31843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.3"	""	"7.5"	""	"11.2"	""	"5.6"	""	"8.3"	"11.2"	""	"545"	"20"	"34.000"	"27.000"	"0.274388879762116"	"23"	"0.007472"	"0.2871"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVGMTLPIAR"	"[K].gGIVGMTLPIAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"3"	"3"	"0.7111"	"0.0000"	"1"	"1"	"1"	"471.95245"	"1413.84281"	"1413.84492"	"-1.50"	"-0.00070"	"12/88"	"12"	"88"	"3395027.44311523"	"HCD"	"MS2"	"32.38326"	"72.5"	"100.000"	"56.0834"	"17358"	"17358"	"17333"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.6"	""	"78.9"	""	"80.8"	""	"134.7"	""	"158.9"	"156.0"	""	"538"	"45"	"34.000"	"27.000"	"0.000926301313753381"	""	"0"	"3.271E-05"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVGMTLPIAR"	"[K].gGIVGMTLPIAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"707.42554"	"1413.84380"	"1413.84492"	"-0.79"	"-0.00056"	"7/88"	"7"	"88"	"4129810.40576172"	"HCD"	"MS2"	"5.609221"	"212.0"	"100.000"	"56.2975"	"17446"	"17446"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"321.9"	""	"303.6"	""	"319.6"	""	"273.5"	""	"382.8"	"408.9"	""	"531"	"50"	"34.000"	"27.000"	"0.000276735277503922"	"18"	"0"	"5.805E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVGMTLPIAR"	"[K].gGIVGMTLPIAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"707.42578"	"1413.84429"	"1413.84492"	"-0.45"	"-0.00032"	"10/88"	"10"	"88"	"5504777.58166504"	"HCD"	"MS2"	"41.63301"	"271.8"	"100.000"	"55.8243"	"17198"	"17198"	"17179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"403.9"	""	"431.4"	""	"438.0"	""	"338.8"	"4.1"	"446.6"	"508.8"	""	"531"	"50"	"34.000"	"27.000"	"0.000257670396303677"	"21"	"0"	"1.489E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVGMTLPIAR"	"[K].gGIVGMTLPIAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"707.42603"	"1413.84477"	"1413.84492"	"-0.10"	"-0.00007"	"15/88"	"15"	"88"	"4597762.25787354"	"HCD"	"MS2"	"55.23354"	"243.5"	"100.000"	"56.0006"	"17324"	"17324"	"17301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"359.1"	""	"358.5"	""	"370.0"	""	"331.9"	"6.8"	"427.0"	"452.4"	""	"515"	"46"	"34.000"	"27.000"	"0.000583145909205212"	"18"	"0"	"7.062E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVGMTLPIAR"	"[K].gGIVGMTLPIAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"707.42621"	"1413.84514"	"1413.84492"	"0.15"	"0.00011"	"7/88"	"7"	"88"	"4492070.59179688"	"HCD"	"MS2"	"22.54837"	"209.8"	"100.000"	"56.1405"	"17327"	"17327"	"17307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.3"	""	"302.2"	""	"295.9"	""	"324.5"	""	"390.7"	"407.3"	""	"517"	"20"	"34.000"	"27.000"	"0.290041770437058"	"15"	"0.0001889"	"0.0006131"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVAYYQK"	"[K].aLVAYYQk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.4167"	"0.0000"	"1"	"1"	"1"	"471.95496"	"1413.85031"	"1413.85061"	"-0.21"	"-0.00010"	"9/60"	"9"	"60"	"7672841.34753418"	"HCD"	"MS2"	"13.55621"	"291.4"	"100.000"	"41.9465"	"11616"	"11616"	"11586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"384.0"	""	"439.4"	""	"472.7"	""	"454.8"	"8.2"	"497.8"	"500.6"	""	"517"	"12"	"34.000"	"27.000"	"1.60125517907348"	"20"	"0.005353"	"0.1645"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVAYYQK"	"[K].aLVAYYQk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"707.42999"	"1413.85271"	"1413.85061"	"1.49"	"0.00105"	"14/60"	"14"	"60"	"4049951.3215332"	"HCD"	"MS2"	"0"	"332.8"	"100.000"	"41.6092"	"11434"	"11434"	"11403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"553.6"	""	"536.3"	""	"582.5"	""	"494.3"	"2.3"	"503.1"	"469.2"	""	"516"	"46"	"34.000"	"27.000"	"0.000652558883083105"	""	"0.0001889"	"0.0006119"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVAYYQK"	"[K].aLVAYYQk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"707.43024"	"1413.85320"	"1413.85061"	"1.83"	"0.00129"	"14/60"	"14"	"60"	"4027796.69317627"	"HCD"	"MS2"	"0"	"316.1"	"100.000"	"41.8202"	"11564"	"11564"	"11538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"537.4"	""	"518.2"	""	"533.3"	""	"450.8"	""	"474.1"	"471.5"	""	"511"	"46"	"34.000"	"27.000"	"0.000643266455042387"	""	"0.0001889"	"0.0006669"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINDLLQSLR"	"[R].iINDLLQSLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"707.43365"	"1413.86003"	"1413.86268"	"-1.87"	"-0.00132"	"11/94"	"11"	"94"	"540191.458496094"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"83.3687"	"28419"	"28419"	"28398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.9"	""	"28.5"	""	"36.4"	""	"59.6"	""	"51.0"	"53.7"	""	"435"	"8"	"33.000"	"26.000"	"3.35319848516529"	"20"	"0.003286"	"0.07538"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALQNLVK"	"[R].vAALQNLVk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"471.97754"	"1413.91806"	"1413.91936"	"-0.91"	"-0.00043"	"7/74"	"7"	"74"	"2340324.81036377"	"HCD"	"MS2"	"40.38651"	"95.8"	"100.000"	"52.4110"	"15824"	"15824"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.8"	""	"108.2"	""	"131.0"	""	"150.5"	"1.0"	"200.4"	"195.0"	""	"200"	"17"	"30.000"	"23.000"	"0.187931681680327"	"18"	"0.0003839"	"0.001549"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVVGAGGVGK"	"[K].lVVVGAGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644; Q04970; P20171"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3; GTPase NRas OS=Rattus norvegicus OX=10116 GN=Nras PE=1 SV=1; GTPase HRas OS=Rattus norvegicus OX=10116 GN=Hras PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"471.97754"	"1413.91806"	"1413.91936"	"-0.91"	"-0.00043"	"8/82"	"8"	"82"	"6847227.11340332"	"HCD"	"MS2"	"14.77291"	"279.2"	"83.381"	"44.5640"	"12678"	"12678"	"12659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.9"	""	"360.8"	""	"345.9"	""	"562.2"	""	"553.3"	"560.2"	""	"200"	"50"	"30.000"	"23.000"	"0.000103992016582906"	"19"	"0"	"5.898E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVVGAGGVGK"	"[K].lVVVGAGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644; Q04970; P20171"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3; GTPase NRas OS=Rattus norvegicus OX=10116 GN=Nras PE=1 SV=1; GTPase HRas OS=Rattus norvegicus OX=10116 GN=Hras PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"471.97772"	"1413.91861"	"1413.91936"	"-0.53"	"-0.00025"	"8/82"	"8"	"82"	"6799853.96594238"	"HCD"	"MS2"	"43.39907"	"304.4"	"100.000"	"44.2270"	"12491"	"12491"	"12470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"300.1"	""	"405.7"	""	"390.5"	""	"586.7"	""	"610.8"	"599.5"	""	"204"	"48"	"30.000"	"23.000"	"0.000144410965555622"	"19"	"0"	"7.662E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVVGAGGVGK"	"[K].lVVVGAGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644; Q04970; P20171"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3; GTPase NRas OS=Rattus norvegicus OX=10116 GN=Nras PE=1 SV=1; GTPase HRas OS=Rattus norvegicus OX=10116 GN=Hras PE=1 SV=2"	"0"	"2"	"2"	"0.9863"	"0.0000"	"1"	"1"	"1"	"707.46295"	"1413.91863"	"1413.91936"	"-0.52"	"-0.00036"	"10/82"	"10"	"82"	"5743952.87103271"	"HCD"	"MS2"	"15.32252"	"338.9"	"100.000"	"44.4816"	"12645"	"12645"	"12620"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"317.6"	""	"533.4"	""	"522.0"	""	"528.4"	""	"653.9"	"661.9"	""	"204"	"73"	"30.000"	"23.000"	"5.67022342415812E-07"	"18"	"0"	"1.112E-05"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALQNLVK"	"[R].vAALQNLVk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"707.46307"	"1413.91887"	"1413.91936"	"-0.34"	"-0.00024"	"8/74"	"8"	"74"	"7213024.59191895"	"HCD"	"MS2"	"0"	"452.5"	"100.000"	"52.4393"	"15885"	"15885"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"668.3"	""	"622.7"	""	"651.4"	""	"709.6"	""	"792.5"	"843.4"	""	"204"	"58"	"30.000"	"23.000"	"1.67340156866353E-05"	"23"	"0.0001308"	"0.0002451"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALQNLVK"	"[R].vAALQNLVk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"707.46350"	"1413.91973"	"1413.91936"	"0.26"	"0.00018"	"8/74"	"8"	"74"	"7078670.58233643"	"HCD"	"MS2"	"8.539193"	"442.7"	"100.000"	"52.2388"	"15753"	"15753"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"667.5"	""	"588.5"	""	"619.3"	""	"705.6"	""	"795.4"	"817.1"	""	"204"	"55"	"30.000"	"23.000"	"2.91474235424245E-05"	""	"0.0001859"	"0.0003361"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVVGAGGVGK"	"[K].lVVVGAGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644; Q04970; P20171"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3; GTPase NRas OS=Rattus norvegicus OX=10116 GN=Nras PE=1 SV=1; GTPase HRas OS=Rattus norvegicus OX=10116 GN=Hras PE=1 SV=2"	"0"	"2"	"2"	"0.9865"	"0.0000"	"1"	"1"	"1"	"707.46362"	"1413.91997"	"1413.91936"	"0.43"	"0.00031"	"10/82"	"10"	"82"	"5348753.11437988"	"HCD"	"MS2"	"0"	"333.8"	"100.000"	"44.2200"	"12488"	"12488"	"12470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.5"	""	"568.9"	""	"494.6"	""	"532.6"	""	"630.0"	"626.6"	""	"204"	"74"	"30.000"	"23.000"	"3.9865771370825E-07"	"18"	"0"	"1.504E-05"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTPVPGK"	"[R].kTPVPGk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.98401"	"1413.93747"	"1413.93965"	"-1.54"	"-0.00072"	"6/60"	"6"	"60"	"2909640.66430664"	"HCD"	"MS2"	"49.28228"	"271.0"	"100.000"	"28.3745"	"6068"	"6068"	"6046"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.5"	""	"360.4"	""	"371.7"	""	"469.0"	"1.3"	"528.2"	"449.1"	""	"106"	"10"	"27.000"	"20.000"	"0.567905231775931"	"13"	"0.003945"	"0.0996"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTPVPGK"	"[R].kTPVPGk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.98401"	"1413.93747"	"1413.93965"	"-1.54"	"-0.00072"	"6/60"	"6"	"60"	"81216763.3574219"	"HCD"	"MS2"	"6.200824"	"1293.3"	"25.794"	"27.9356"	"5924"	"5924"	"5905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1698.0"	""	"1880.9"	""	"1741.8"	""	"2108.0"	""	"2393.0"	"2443.5"	""	"106"	"18"	"27.000"	"20.000"	"0.0766083078495342"	"14"	"0.003788"	"0.09355"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTPVPGK"	"[R].kTPVPGk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.98410"	"1413.93775"	"1413.93965"	"-1.34"	"-0.00063"	"6/60"	"6"	"60"	"90604911.8586426"	"HCD"	"MS2"	"7.59011"	"1324.3"	"25.336"	"27.8885"	"5870"	"5870"	"5852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1706.6"	""	"1946.6"	""	"1711.1"	""	"2121.2"	""	"2545.0"	"2537.0"	""	"106"	"19"	"27.000"	"20.000"	"0.0741781280963488"	"14"	"0.003286"	"0.07411"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTPVPGK"	"[R].kTPVPGk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.47266"	"1413.93804"	"1413.93965"	"-1.14"	"-0.00081"	"5/60"	"5"	"60"	"2875174.71154785"	"HCD"	"MS2"	"0"	"201.4"	"100.000"	"27.9162"	"5882"	"5882"	"5852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"260.7"	""	"303.4"	""	"283.5"	""	"317.7"	""	"386.4"	"359.1"	""	"106"	"14"	"27.000"	"20.000"	"0.22401436556077"	"13"	"0.008122"	"0.3417"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFPAFSGISR"	"[R].fGFPAFSGISR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"707.88715"	"1414.76702"	"1414.76805"	"-0.73"	"-0.00052"	"10/86"	"10"	"86"	"4948547.4666748"	"HCD"	"MS2"	"46.20869"	"233.1"	"100.000"	"64.2343"	"20682"	"20682"	"20659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"360.4"	""	"340.6"	""	"357.6"	""	"363.4"	"0.0"	"373.9"	"408.1"	""	"758"	"37"	"35.000"	"28.000"	"0.00725502995582992"	"24"	"0"	"4.735E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFPAFSGISR"	"[R].fGFPAFSGISR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"707.88739"	"1414.76750"	"1414.76805"	"-0.39"	"-0.00027"	"8/86"	"8"	"86"	"5968464.20788574"	"HCD"	"MS2"	"8.81839"	"279.1"	"100.000"	"64.5318"	"20804"	"20804"	"20787"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"452.1"	""	"418.0"	""	"416.9"	""	"429.2"	""	"446.8"	"479.1"	""	"756"	"38"	"35.000"	"28.000"	"0.00589510846068588"	"25"	"0"	"7.268E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFPAFSGISR"	"[R].fGFPAFSGISR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"707.88770"	"1414.76811"	"1414.76805"	"0.04"	"0.00003"	"9/86"	"9"	"86"	"3678634.22314453"	"HCD"	"MS2"	"47.81292"	"190.2"	"100.000"	"64.1807"	"20607"	"20607"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"283.9"	""	"279.5"	""	"275.7"	""	"311.3"	""	"315.8"	"336.3"	""	"751"	"31"	"35.000"	"28.000"	"0.0303116753858439"	"24"	"0"	"5.566E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFPAFSGISR"	"[R].fGFPAFSGISR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"707.88861"	"1414.76995"	"1414.76805"	"1.34"	"0.00095"	"8/86"	"8"	"86"	"6863890.74414063"	"HCD"	"MS2"	"12.22485"	"329.3"	"100.000"	"64.4802"	"20730"	"20730"	"20713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"511.6"	""	"486.6"	""	"488.1"	""	"532.8"	""	"539.3"	"559.1"	""	"736"	"38"	"35.000"	"28.000"	"0.00551884019464873"	"25"	"0"	"8.034E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"707.90106"	"1414.79485"	"1414.79824"	"-2.40"	"-0.00170"	"12/62"	"12"	"62"	"2458818.09985352"	"HCD"	"MS2"	"0"	"232.8"	"100.000"	"42.8912"	"11955"	"11955"	"11939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"227.7"	""	"269.1"	""	"248.6"	""	"393.9"	""	"524.6"	"554.5"	""	"793"	"33"	"35.000"	"28.000"	"0.019599418739028"	"27"	"0.0003146"	"0.001427"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFSLFDK"	"[K].eAFSLFDk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29; Q5U206"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1; Calmodulin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Calml3 PE=2 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"707.90131"	"1414.79534"	"1414.79824"	"-2.05"	"-0.00145"	"7/68"	"7"	"68"	"9835151.10205078"	"HCD"	"MS2"	"3.122415"	"869.3"	"100.000"	"58.3669"	"18237"	"18237"	"18218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"758.3"	""	"847.8"	""	"1035.5"	""	"2181.1"	""	"1706.7"	"1733.7"	""	"789"	"40"	"35.000"	"28.000"	"0.00359788276125906"	"24"	"0.0003146"	"0.001463"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFSLFDK"	"[K].eAFSLFDk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29; Q5U206"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1; Calmodulin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Calml3 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"472.27017"	"1414.79596"	"1414.79824"	"-1.61"	"-0.00076"	"5/68"	"5"	"68"	"3070721.29101563"	"HCD"	"MS2"	"0"	"129.5"	"100.000"	"58.3531"	"18232"	"18232"	"18203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.4"	""	"133.7"	""	"146.6"	""	"320.8"	""	"262.7"	"247.1"	""	"781"	"20"	"35.000"	"28.000"	"0.435132015367571"	"14"	"0.0006037"	"0.004866"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"707.90179"	"1414.79631"	"1414.79824"	"-1.36"	"-0.00096"	"12/62"	"12"	"62"	"2398586.74542236"	"HCD"	"MS2"	"28.67719"	"232.1"	"100.000"	"43.1360"	"12100"	"12100"	"12079"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.4"	""	"273.1"	""	"270.3"	""	"381.0"	"4.3"	"518.9"	"529.6"	""	"781"	"31"	"35.000"	"28.000"	"0.0284853157754409"	""	"0.0002277"	"0.001173"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSEYMSK"	"[K].lVSEYMSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"707.90234"	"1414.79741"	"1414.80161"	"-2.97"	"-0.00210"	"7/64"	"7"	"64"	"4020585.85150146"	"HCD"	"MS2"	"0"	"343.2"	"100.000"	"43.5528"	"12265"	"12265"	"12244"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"591.3"	""	"559.2"	""	"581.6"	""	"347.2"	"2.1"	"563.3"	"599.6"	""	"773"	"42"	"35.000"	"28.000"	"0.00271112472839319"	"24"	"0.0001889"	"0.0005077"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSEYMSK"	"[K].lVSEYMSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"707.90283"	"1414.79839"	"1414.80161"	"-2.28"	"-0.00161"	"7/64"	"7"	"64"	"2650558.46075439"	"HCD"	"MS2"	"0"	"234.6"	"100.000"	"43.6097"	"12239"	"12239"	"12221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"368.3"	""	"352.3"	""	"370.9"	""	"264.6"	"0.0"	"427.4"	"437.9"	""	"782"	"32"	"35.000"	"28.000"	"0.0243319411501141"	"21"	"0.0001889"	"0.0007385"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSEYMSK"	"[K].lVSEYMSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"707.90314"	"1414.79900"	"1414.80161"	"-1.85"	"-0.00131"	"7/64"	"7"	"64"	"3485785.08300781"	"HCD"	"MS2"	"0"	"317.0"	"100.000"	"43.2979"	"12113"	"12113"	"12085"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"536.3"	""	"526.3"	""	"513.4"	""	"330.1"	"2.3"	"544.9"	"544.2"	""	"782"	"40"	"35.000"	"28.000"	"0.00392804773998853"	"24"	"0.0001889"	"0.0004244"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSEFLGK"	"[KR].lYSEFLGk.[QR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"707.92029"	"1414.83330"	"1414.83462"	"-0.94"	"-0.00066"	"7/58"	"7"	"58"	"38356823.3046875"	"HCD"	"MS2"	"0"	"409.5"	"13.483"	"57.8643"	"18086"	"18086"	"18069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"617.0"	""	"570.5"	""	"625.0"	""	"572.0"	"1.2"	"720.2"	"771.5"	""	"756"	"40"	"35.000"	"28.000"	"0.0039581459116324"	"20"	"0.0004166"	"0.00239"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSEFLGK"	"[KR].lYSEFLGk.[QR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"472.28268"	"1414.83350"	"1414.83462"	"-0.79"	"-0.00037"	"5/58"	"5"	"58"	"6772213.91204834"	"HCD"	"MS2"	"22.82818"	"253.5"	"100.000"	"57.7044"	"17966"	"17966"	"17947"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.6"	""	"349.0"	""	"379.5"	""	"396.3"	"0.2"	"461.4"	"466.6"	""	"756"	"26"	"35.000"	"28.000"	"0.0867944188986473"	"18"	"0.004346"	"0.1241"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSEFLGK"	"[KR].lYSEFLGk.[QR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"472.28281"	"1414.83387"	"1414.83462"	"-0.54"	"-0.00025"	"5/58"	"5"	"58"	"15507472.4856567"	"HCD"	"MS2"	"50.93067"	"552.4"	"100.000"	"57.3960"	"17840"	"17840"	"17819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"790.3"	""	"778.7"	""	"817.2"	""	"841.5"	""	"994.1"	"1017.5"	""	"741"	"23"	"35.000"	"28.000"	"0.175706655538921"	"16"	"0.0009727"	"0.01039"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSEFLGK"	"[KR].lYSEFLGk.[QR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"707.92078"	"1414.83428"	"1414.83462"	"-0.25"	"-0.00017"	"7/58"	"7"	"58"	"27203489.5627441"	"HCD"	"MS2"	"0.4548407"	"517.6"	"22.595"	"57.6977"	"17964"	"17964"	"17947"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"749.2"	""	"741.5"	""	"802.8"	""	"728.2"	""	"894.5"	"988.4"	""	"740"	"38"	"35.000"	"28.000"	"0.00558729657040735"	"19"	"0.0004166"	"0.002189"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFESVFK"	"[K].tVFESVFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"707.92084"	"1414.83440"	"1414.83462"	"-0.16"	"-0.00011"	"7/64"	"7"	"64"	"9108484.45129395"	"HCD"	"MS2"	"8.839329"	"701.9"	"100.000"	"56.9215"	"17646"	"17646"	"17627"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"559.4"	""	"619.7"	""	"597.4"	""	"1367.6"	""	"1768.1"	"1788.4"	""	"741"	"48"	"35.000"	"28.000"	"0.000534303737739964"	""	"0.0001889"	"0.0008876"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSEFLGK"	"[KR].lYSEFLGk.[QR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"472.28302"	"1414.83451"	"1414.83462"	"-0.08"	"-0.00004"	"5/58"	"5"	"58"	"5800021.69885254"	"HCD"	"MS2"	"13.39159"	"216.4"	"100.000"	"57.9196"	"18108"	"18108"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"302.9"	""	"303.4"	""	"329.3"	""	"349.8"	""	"378.2"	"386.7"	""	"745"	"21"	"35.000"	"28.000"	"0.300695048767692"	"16"	"0.006001"	"0.2076"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFESVFK"	"[K].tVFESVFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"0"	"2"	"2"	"0.5319"	"0.0000"	"1"	"1"	"1"	"707.92096"	"1414.83464"	"1414.83462"	"0.01"	"0.00001"	"7/64"	"7"	"64"	"9429251.07818604"	"HCD"	"MS2"	"11.13859"	"740.4"	"100.000"	"57.1270"	"17784"	"17784"	"17765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"577.8"	""	"673.2"	""	"610.9"	""	"1430.1"	"11.7"	"1877.0"	"1885.6"	""	"741"	"47"	"35.000"	"28.000"	"0.000808701432337832"	""	"0.0001889"	"0.0005876"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSEFLGK"	"[KR].lYSEFLGk.[QR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"707.92096"	"1414.83464"	"1414.83462"	"0.01"	"0.00001"	"7/58"	"7"	"58"	"32936729.1838379"	"HCD"	"MS2"	"41.05925"	"1202.6"	"53.417"	"57.5513"	"17958"	"17958"	"17941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1772.5"	""	"1760.5"	""	"1791.3"	""	"1873.4"	""	"2051.9"	"2134.7"	""	"741"	"26"	"35.000"	"28.000"	"0.0979012444587782"	"15"	"0.0003839"	"0.002013"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSEFLGK"	"[KR].lYSEFLGk.[QR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"707.92108"	"1414.83489"	"1414.83462"	"0.19"	"0.00013"	"7/58"	"7"	"58"	"2562486.61047363"	"HCD"	"MS2"	"28.73982"	"235.3"	"100.000"	"58.0315"	"18100"	"18100"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"361.1"	""	"349.2"	""	"374.7"	""	"335.5"	"1.1"	"391.1"	"412.7"	""	"741"	"40"	"35.000"	"28.000"	"0.00358746945744793"	"20"	"0.0001889"	"0.0004052"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSEFLGK"	"[KR].lYSEFLGk.[QR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"707.92108"	"1414.83489"	"1414.83462"	"0.19"	"0.00013"	"7/58"	"7"	"58"	"47512514.3383789"	"HCD"	"MS2"	"26.42804"	"1163.1"	"31.443"	"57.3844"	"17836"	"17836"	"17819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1769.5"	""	"1706.3"	""	"1734.0"	""	"1783.1"	"9.2"	"1932.4"	"2069.6"	""	"741"	"29"	"35.000"	"28.000"	"0.0455814579585987"	"16"	"0.000523"	"0.003067"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFESVFK"	"[K].tVFESVFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"472.28317"	"1414.83496"	"1414.83462"	"0.24"	"0.00011"	"7/64"	"7"	"64"	"2890355.20062256"	"HCD"	"MS2"	"7.618914"	"112.5"	"100.000"	"57.2170"	"17821"	"17821"	"17797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.2"	""	"101.8"	""	"103.9"	""	"209.0"	"0.2"	"279.1"	"295.6"	""	"741"	"27"	"35.000"	"28.000"	"0.0740948822698932"	"25"	"0.0001889"	"0.0005135"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFESVFK"	"[K].tVFESVFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"472.28323"	"1414.83515"	"1414.83462"	"0.37"	"0.00017"	"7/64"	"7"	"64"	"2890348.32653809"	"HCD"	"MS2"	"23.01923"	"111.3"	"100.000"	"56.9813"	"17671"	"17671"	"17643"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.1"	""	"107.1"	""	"100.2"	""	"219.8"	""	"268.7"	"282.9"	""	"743"	"20"	"35.000"	"28.000"	"0.364719360831924"	"22"	"0.0003146"	"0.00146"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSEFLGK"	"[KR].lYSEFLGk.[QR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"472.28323"	"1414.83515"	"1414.83462"	"0.37"	"0.00017"	"5/58"	"5"	"58"	"18644240.3408203"	"HCD"	"MS2"	"41.36175"	"621.4"	"100.000"	"57.6043"	"17979"	"17979"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"925.0"	""	"891.7"	""	"944.8"	""	"930.1"	"4.7"	"1108.1"	"1077.7"	""	"743"	"26"	"35.000"	"28.000"	"0.0933165809305809"	"21"	"0.003045"	"0.05876"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSEFLGK"	"[KR].lYSEFLGk.[QR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P08009; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"707.92145"	"1414.83562"	"1414.83462"	"0.70"	"0.00050"	"7/58"	"7"	"58"	"2345271.52600098"	"HCD"	"MS2"	"34.49463"	"207.3"	"100.000"	"58.2372"	"18238"	"18238"	"18213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"315.7"	""	"309.7"	""	"335.0"	""	"284.3"	"4.2"	"364.1"	"347.9"	""	"743"	"38"	"35.000"	"28.000"	"0.0063673513973938"	"18"	"0.0001889"	"0.0007622"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSYLSYK"	"[K].vPSYLSYk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08464"	"Frizzled-2 OS=Rattus norvegicus OX=10116 GN=Fzd2 PE=1 SV=1"	"Q08464"	"Frizzled-2 OS=Rattus norvegicus OX=10116 GN=Fzd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.92151"	"1414.83574"	"1414.83462"	"0.79"	"0.00056"	"6/62"	"6"	"62"	"941589.328674316"	"HCD"	"MS2"	"0"	"93.4"	"100.000"	"46.0487"	"13279"	"13279"	"13257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.8"	""	"125.7"	""	"114.9"	""	"156.9"	""	"189.9"	"182.9"	""	"743"	"16"	"35.000"	"28.000"	"0.924610493741908"	"14"	"0.001945"	"0.02742"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVETAVLLLR"	"[K].tAVETAVLLLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.7660"	"0.0000"	"1"	"1"	"1"	"472.29855"	"1414.88111"	"1414.88308"	"-1.40"	"-0.00066"	"12/88"	"12"	"88"	"1506340.7532959"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"64.0038"	"20588"	"20588"	"20563"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.5"	""	"29.3"	""	"34.3"	""	"36.4"	"2.5"	"46.9"	"42.0"	""	"455"	"47"	"33.000"	"26.000"	"0.000413029813280889"	""	"0.0001308"	"0.0002153"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVETAVLLLR"	"[K].tAVETAVLLLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"707.94452"	"1414.88176"	"1414.88308"	"-0.93"	"-0.00066"	"9/88"	"9"	"88"	"6545219.07159424"	"HCD"	"MS2"	"22.15274"	"279.8"	"100.000"	"63.9534"	"20567"	"20567"	"20547"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.2"	""	"396.8"	""	"367.9"	""	"465.1"	""	"541.1"	"515.9"	""	"436"	"60"	"33.000"	"26.000"	"2.02514672318026E-05"	"19"	"0"	"0.0001157"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVETAVLLLR"	"[K].tAVETAVLLLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.7627"	"0.0000"	"1"	"1"	"1"	"472.29886"	"1414.88202"	"1414.88308"	"-0.75"	"-0.00035"	"14/88"	"14"	"88"	"1862563.0647583"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"63.9570"	"20516"	"20516"	"20489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.1"	""	"32.8"	""	"28.4"	""	"39.0"	""	"53.7"	"46.6"	""	"436"	"59"	"33.000"	"26.000"	"2.92049517858854E-05"	""	"0"	"8.647E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVETAVLLLR"	"[K].tAVETAVLLLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"707.94489"	"1414.88249"	"1414.88308"	"-0.42"	"-0.00029"	"9/88"	"9"	"88"	"6251352.26916504"	"HCD"	"MS2"	"32.65541"	"286.5"	"100.000"	"63.9020"	"20493"	"20493"	"20473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.6"	""	"399.3"	""	"380.8"	""	"496.2"	""	"517.9"	"550.0"	""	"434"	"60"	"33.000"	"26.000"	"2.04861210154045E-05"	"20"	"0"	"9.756E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLLHMLK"	"[K].tTLLHMLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"3"	"3"	"0.6190"	"0.0000"	"1"	"1"	"1"	"472.29959"	"1414.88422"	"1414.88561"	"-0.98"	"-0.00046"	"4/58"	"4"	"58"	"8234908.64276123"	"HCD"	"MS2"	"26.05927"	"317.9"	"100.000"	"45.1817"	"12929"	"12929"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"421.2"	""	"403.3"	""	"459.0"	""	"502.4"	""	"619.5"	"614.7"	""	"428"	"21"	"33.000"	"26.000"	"0.164215358723429"	"22"	"0.0003839"	"0.001868"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLLHMLK"	"[K].tTLLHMLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"472.30002"	"1414.88550"	"1414.88561"	"-0.08"	"-0.00004"	"10/58"	"10"	"58"	"8325106.61956787"	"HCD"	"MS2"	"21.61617"	"303.3"	"100.000"	"44.9312"	"12778"	"12778"	"12752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"397.8"	""	"401.2"	""	"419.3"	""	"472.5"	""	"598.5"	"592.1"	""	"422"	"30"	"33.000"	"26.000"	"0.0228182563723865"	"19"	"0.0002277"	"0.00125"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLQQIK"	"[R].vLDLQQIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"3"	"3"	"0.3611"	"0.0000"	"1"	"1"	"1"	"472.30557"	"1414.90216"	"1414.90337"	"-0.85"	"-0.00040"	"6/62"	"6"	"62"	"1767756.56835938"	"HCD"	"MS2"	"5.564837"	"81.0"	"100.000"	"51.9439"	"15633"	"15633"	"15602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.0"	""	"106.3"	""	"115.5"	""	"127.9"	"0.9"	"153.3"	"149.8"	""	"335"	"36"	"32.000"	"25.000"	"0.00426594067307994"	""	"0.0005564"	"0.0034"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLDALLAGK"	"[R].gVLDALLAGk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P0C5W1"	"Microtubule-associated protein 1S OS=Rattus norvegicus OX=10116 GN=Map1s PE=1 SV=1"	"P0C5W1"	"Microtubule-associated protein 1S OS=Rattus norvegicus OX=10116 GN=Map1s PE=1 SV=1"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"707.95490"	"1414.90251"	"1414.90337"	"-0.61"	"-0.00043"	"16/72"	"16"	"72"	"1303875.62896729"	"HCD"	"MS2"	"33.0214"	"96.1"	"100.000"	"70.9667"	"23421"	"23421"	"23402"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.3"	"2.3"	"131.2"	""	"130.6"	""	"172.7"	"3.0"	"172.4"	"177.3"	""	"340"	"45"	"32.000"	"25.000"	"0.000577362963403695"	""	"0"	"4.008E-05"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLQQIK"	"[R].vLDLQQIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"707.95496"	"1414.90264"	"1414.90337"	"-0.52"	"-0.00037"	"14/62"	"14"	"62"	"5262707.06188965"	"HCD"	"MS2"	"10.75401"	"361.0"	"100.000"	"52.0452"	"15724"	"15724"	"15702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"555.3"	""	"454.8"	""	"499.7"	""	"587.2"	"2.6"	"668.5"	"651.2"	""	"340"	"44"	"32.000"	"25.000"	"0.000694142956765577"	""	"0.0001889"	"0.0007471"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLQQIK"	"[R].vLDLQQIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"2"	"2"	"0.3696"	"0.0000"	"1"	"1"	"1"	"707.95502"	"1414.90276"	"1414.90337"	"-0.43"	"-0.00031"	"14/62"	"14"	"62"	"5505078.17041016"	"HCD"	"MS2"	"16.32477"	"394.0"	"100.000"	"51.8426"	"15591"	"15591"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"623.8"	""	"506.9"	""	"546.7"	""	"634.9"	""	"693.5"	"726.9"	""	"340"	"46"	"32.000"	"25.000"	"0.000462859222373246"	""	"0.0001889"	"0.0005209"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDLQQIK"	"[R].vLDLQQIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"472.30585"	"1414.90299"	"1414.90337"	"-0.27"	"-0.00013"	"6/62"	"6"	"62"	"1993901.01586914"	"HCD"	"MS2"	"6.748287"	"90.4"	"100.000"	"52.1372"	"15762"	"15762"	"15734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.8"	""	"114.8"	""	"122.6"	""	"149.8"	"0.8"	"187.3"	"163.0"	""	"340"	"30"	"32.000"	"25.000"	"0.0152914588860106"	""	"0.001454"	"0.02025"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLDALLAGK"	"[R].gVLDALLAGk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P0C5W1"	"Microtubule-associated protein 1S OS=Rattus norvegicus OX=10116 GN=Map1s PE=1 SV=1"	"P0C5W1"	"Microtubule-associated protein 1S OS=Rattus norvegicus OX=10116 GN=Map1s PE=1 SV=1"	"0"	"2"	"2"	"0.6727"	"0.0000"	"1"	"1"	"1"	"707.95526"	"1414.90325"	"1414.90337"	"-0.09"	"-0.00006"	"9/72"	"9"	"72"	"1109921.07904053"	"HCD"	"MS2"	"0"	"86.5"	"100.000"	"70.9753"	"23373"	"23373"	"23347"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.4"	""	"100.9"	""	"128.7"	""	"137.6"	""	"175.9"	"177.0"	""	"340"	"55"	"32.000"	"25.000"	"5.19336589246638E-05"	""	"0"	"1.458E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAIYGFGDK"	"[K].sAIYGFGDk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"708.39874"	"1415.79021"	"1415.79349"	"-2.32"	"-0.00164"	"8/78"	"8"	"78"	"2899033.97094727"	"HCD"	"MS2"	"0"	"255.7"	"100.000"	"42.1156"	"11638"	"11638"	"11615"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"349.9"	""	"367.5"	""	"370.3"	""	"413.6"	"3.7"	"445.9"	"470.9"	""	"918"	"44"	"36.000"	"29.000"	"0.00180224025348416"	"15"	"0"	"0.0001673"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAIYGFGDK"	"[K].sAIYGFGDk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"708.39880"	"1415.79033"	"1415.79349"	"-2.23"	"-0.00158"	"8/78"	"8"	"78"	"2739127.66925049"	"HCD"	"MS2"	"0"	"236.7"	"100.000"	"42.3198"	"11766"	"11766"	"11742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"336.8"	""	"343.2"	""	"361.0"	""	"370.4"	""	"405.5"	"425.7"	""	"901"	"44"	"36.000"	"29.000"	"0.00191732085116751"	"18"	"0"	"0.0001483"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AESFFQTK"	"[K].aESFFQTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"708.39935"	"1415.79143"	"1415.79349"	"-1.45"	"-0.00103"	"7/70"	"7"	"70"	"6711497.1036377"	"HCD"	"MS2"	"35.51059"	"604.2"	"100.000"	"42.5406"	"11812"	"11812"	"11788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1069.7"	""	"846.7"	""	"870.4"	""	"875.0"	"23.5"	"1000.9"	"1027.2"	""	"893"	"44"	"36.000"	"29.000"	"0.00195803956556531"	"23"	"0.0001889"	"0.0006821"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AESFFQTK"	"[K].aESFFQTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"708.39954"	"1415.79180"	"1415.79349"	"-1.19"	"-0.00085"	"7/70"	"7"	"70"	"6494683.43145752"	"HCD"	"MS2"	"20.58885"	"597.9"	"100.000"	"42.8498"	"11983"	"11983"	"11955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1051.6"	""	"848.9"	""	"868.1"	""	"793.7"	"25.6"	"971.8"	"1094.6"	""	"894"	"26"	"36.000"	"29.000"	"0.114105748228958"	"22"	"0.0003839"	"0.001781"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAQQIQK"	"[R].eLAQQIQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"708.43604"	"1415.86479"	"1415.86224"	"1.81"	"0.00128"	"7/64"	"7"	"64"	"617178.042114258"	"HCD"	"MS2"	"0"	"57.3"	"100.000"	"35.0543"	"8791"	"8791"	"8762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.1"	""	"65.4"	""	"69.7"	""	"107.6"	"0.5"	"107.2"	"115.5"	""	"603"	"42"	"34.000"	"27.000"	"0.00205251961646163"	""	"0.0001859"	"0.0003646"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLMQPEK"	"[K].lVLMQPEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"708.43805"	"1415.86882"	"1415.86963"	"-0.57"	"-0.00040"	"12/62"	"12"	"62"	"8533616.11437988"	"HCD"	"MS2"	"4.38993"	"490.0"	"100.000"	"47.9514"	"14057"	"14057"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"865.4"	""	"764.9"	""	"760.3"	""	"509.1"	""	"852.7"	"886.0"	""	"589"	"35"	"34.000"	"27.000"	"0.0100019642777875"	"25"	"0.0001889"	"0.0007425"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLMQPEK"	"[K].lVLMQPEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"472.62793"	"1415.86924"	"1415.86963"	"-0.28"	"-0.00013"	"8/62"	"8"	"62"	"8228390.12072754"	"HCD"	"MS2"	"15.06879"	"274.7"	"100.000"	"47.9697"	"14065"	"14065"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"455.6"	"2.6"	"415.2"	""	"419.8"	""	"303.4"	"1.0"	"502.4"	"500.7"	""	"589"	"24"	"34.000"	"27.000"	"0.113262279812357"	"23"	"0.0008731"	"0.008606"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLMQPEK"	"[K].lVLMQPEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"708.43878"	"1415.87029"	"1415.86963"	"0.46"	"0.00033"	"12/62"	"12"	"62"	"8570911.02648926"	"HCD"	"MS2"	"7.955362"	"538.6"	"100.000"	"47.6829"	"13899"	"13899"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"924.1"	""	"871.3"	""	"825.1"	""	"542.1"	""	"933.7"	"1003.1"	""	"539"	"35"	"34.000"	"27.000"	"0.00925888669590162"	"22"	"0.0001889"	"0.0008532"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLMQPEK"	"[K].lVLMQPEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"472.62842"	"1415.87070"	"1415.86963"	"0.76"	"0.00036"	"8/62"	"8"	"62"	"8196915.50756836"	"HCD"	"MS2"	"7.263252"	"295.6"	"100.000"	"47.6968"	"13905"	"13905"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"483.7"	""	"445.6"	""	"448.9"	""	"335.6"	""	"545.5"	"539.4"	""	"556"	"29"	"34.000"	"27.000"	"0.0370718958141404"	"24"	"0.0005564"	"0.00338"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDQIVEK"	"[R].lLDQIVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"708.44666"	"1415.88603"	"1415.88739"	"-0.96"	"-0.00068"	"7/72"	"7"	"72"	"3247115.36694336"	"HCD"	"MS2"	"22.56874"	"227.8"	"100.000"	"54.9070"	"16823"	"16823"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.9"	""	"266.9"	""	"287.4"	""	"407.5"	"0.7"	"429.9"	"437.9"	""	"516"	"40"	"34.000"	"27.000"	"0.00241334663930068"	""	"0.0001889"	"0.0005321"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDQIVEK"	"[R].lLDQIVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"708.44672"	"1415.88616"	"1415.88739"	"-0.87"	"-0.00062"	"7/72"	"7"	"72"	"3209655.13580322"	"HCD"	"MS2"	"28.64551"	"227.1"	"100.000"	"55.1015"	"16956"	"16956"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"320.1"	""	"260.0"	""	"287.4"	""	"414.7"	"1.1"	"431.7"	"438.1"	""	"516"	"42"	"34.000"	"27.000"	"0.00166578791090941"	""	"0.0001889"	"0.0004147"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPQIVK"	"[K].fIIPQIVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"708.47150"	"1415.93572"	"1415.93903"	"-2.34"	"-0.00166"	"7/64"	"7"	"64"	"3077213.00756836"	"HCD"	"MS2"	"34.7759"	"192.4"	"100.000"	"67.0633"	"21784"	"21784"	"21769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"286.1"	""	"284.9"	""	"286.8"	""	"271.1"	""	"336.5"	"357.4"	""	"186"	"37"	"29.000"	"22.000"	"0.00175987956533983"	""	"0.0001889"	"0.001042"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPQIVK"	"[K].fIIPQIVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"708.47186"	"1415.93645"	"1415.93903"	"-1.82"	"-0.00129"	"7/64"	"7"	"64"	"2639265.25488281"	"HCD"	"MS2"	"33.18291"	"159.4"	"100.000"	"67.0004"	"21811"	"21811"	"21795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.1"	""	"240.1"	""	"244.3"	""	"220.5"	""	"263.4"	"293.8"	""	"186"	"41"	"29.000"	"22.000"	"0.00079155837552821"	""	"0.0001889"	"0.0007876"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPQIVK"	"[K].fIIPQIVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"472.65048"	"1415.93689"	"1415.93903"	"-1.51"	"-0.00071"	"9/64"	"9"	"64"	"7847619.75421143"	"HCD"	"MS2"	"6.662324"	"224.9"	"100.000"	"66.7336"	"21702"	"21702"	"21683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"373.2"	""	"373.0"	""	"328.4"	""	"344.4"	""	"337.5"	"373.2"	""	"186"	"32"	"29.000"	"22.000"	"0.00630206602077928"	""	"0.0006037"	"0.003987"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPQIVK"	"[K].fIIPQIVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"708.47260"	"1415.93791"	"1415.93903"	"-0.79"	"-0.00056"	"7/64"	"7"	"64"	"8766275.75640869"	"HCD"	"MS2"	"22.09995"	"443.8"	"100.000"	"66.7573"	"21659"	"21659"	"21641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"749.8"	""	"721.8"	""	"688.1"	""	"591.0"	""	"693.7"	"752.3"	""	"186"	"37"	"29.000"	"22.000"	"0.00182172554636057"	"22"	"0.0001889"	"0.0009436"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPQIVK"	"[K].fIIPQIVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"708.47266"	"1415.93804"	"1415.93903"	"-0.70"	"-0.00050"	"7/64"	"7"	"64"	"8604718.65179443"	"HCD"	"MS2"	"30.44445"	"440.9"	"100.000"	"66.6646"	"21674"	"21674"	"21651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"747.9"	""	"739.8"	""	"660.4"	""	"624.2"	""	"656.9"	"739.5"	""	"186"	"38"	"29.000"	"22.000"	"0.00138192014732692"	"22"	"0.0002277"	"0.001257"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIPQIVK"	"[K].fIIPQIVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"472.65115"	"1415.93891"	"1415.93903"	"-0.09"	"-0.00004"	"6/64"	"6"	"64"	"6680707.43066406"	"HCD"	"MS2"	"11.11508"	"190.8"	"100.000"	"66.8036"	"21678"	"21678"	"21657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"312.4"	""	"313.7"	""	"313.6"	""	"274.7"	"1.3"	"281.9"	"304.3"	""	"127"	"33"	"28.000"	"21.000"	"0.00337888744634414"	"21"	"0.000523"	"0.002813"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNSYSLWR"	"[K].fDNSYSLWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TNY6"	"Golgi resident protein GCP60 OS=Rattus norvegicus OX=10116 GN=Acbd3 PE=1 SV=3"	"Q7TNY6"	"Golgi resident protein GCP60 OS=Rattus norvegicus OX=10116 GN=Acbd3 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"708.85938"	"1416.71147"	"1416.71093"	"0.38"	"0.00027"	"8/84"	"8"	"84"	"1632528.27478027"	"HCD"	"MS2"	"40.59098"	"137.6"	"100.000"	"54.0042"	"16454"	"16454"	"16434"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.5"	""	"197.6"	""	"204.7"	""	"204.3"	"0.4"	"241.3"	"236.4"	""	"616"	"12"	"34.000"	"27.000"	"1.89474476794639"	"17"	"0.0001889"	"0.0004546"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSLGVAFYR"	"[R].fQSLGVAFYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.4167"	"0.0000"	"1"	"1"	"1"	"472.93234"	"1416.78247"	"1416.78370"	"-0.87"	"-0.00041"	"12/88"	"12"	"88"	"2298593.64440918"	"HCD"	"MS2"	"24.15304"	"97.9"	"100.000"	"58.2018"	"18170"	"18170"	"18139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.3"	""	"122.5"	""	"145.9"	""	"163.6"	"3.6"	"173.5"	"204.8"	""	"944"	"12"	"36.000"	"29.000"	"2.83754004092107"	"20"	"0.0002277"	"0.001172"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSLGVAFYR"	"[R].fQSLGVAFYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"708.89551"	"1416.78374"	"1416.78370"	"0.03"	"0.00002"	"7/88"	"7"	"88"	"9251204.81933594"	"HCD"	"MS2"	"12.53188"	"519.0"	"100.000"	"58.1420"	"18145"	"18145"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"626.6"	""	"855.3"	""	"846.8"	""	"825.6"	"0.3"	"822.0"	"934.0"	""	"961"	"51"	"36.000"	"29.000"	"0.000394178917050478"	"20"	"0"	"0.0001462"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSLGVAFYR"	"[R].fQSLGVAFYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"708.89557"	"1416.78386"	"1416.78370"	"0.11"	"0.00008"	"7/88"	"7"	"88"	"8235196.43377686"	"HCD"	"MS2"	"12.31667"	"450.7"	"100.000"	"58.3043"	"18265"	"18265"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"501.8"	""	"749.8"	""	"746.3"	""	"737.5"	""	"751.2"	"787.2"	""	"958"	"42"	"36.000"	"29.000"	"0.00293315837636166"	"19"	"0"	"0.0001804"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLQSVQVFGR"	"[K].gPLQSVQVFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"708.91138"	"1416.81548"	"1416.81606"	"-0.41"	"-0.00029"	"7/94"	"7"	"94"	"4554689.18609619"	"HCD"	"MS2"	"11.88768"	"261.5"	"100.000"	"46.9927"	"13617"	"13617"	"13592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"392.4"	""	"401.4"	""	"390.7"	""	"459.2"	"1.5"	"450.2"	"377.5"	""	"886"	"47"	"36.000"	"29.000"	"0.000832537349843849"	"22"	"0"	"3.433E-05"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLAWQSLNR"	"[K].sLLAWQSLNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"708.91156"	"1416.81584"	"1416.81606"	"-0.16"	"-0.00011"	"7/92"	"7"	"92"	"5739773.85906982"	"HCD"	"MS2"	"5.274779"	"334.5"	"100.000"	"52.7492"	"15962"	"15962"	"15938"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"478.7"	""	"513.1"	""	"504.1"	""	"448.0"	"5.4"	"568.8"	"648.7"	""	"886"	"39"	"36.000"	"29.000"	"0.00516896660358007"	""	"0.0001308"	"0.0002449"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLQSVQVFGR"	"[K].gPLQSVQVFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"708.91168"	"1416.81609"	"1416.81606"	"0.02"	"0.00001"	"7/94"	"7"	"94"	"5362706.11431885"	"HCD"	"MS2"	"0"	"295.2"	"100.000"	"47.2817"	"13783"	"13783"	"13762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.2"	""	"441.8"	""	"466.3"	""	"518.6"	"6.7"	"500.7"	"431.8"	""	"886"	"47"	"36.000"	"29.000"	"0.000821114509172762"	"22"	"0"	"3.935E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLQSVQVFGR"	"[K].gPLQSVQVFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"708.91180"	"1416.81633"	"1416.81606"	"0.19"	"0.00013"	"10/94"	"10"	"94"	"3923550.89569092"	"HCD"	"MS2"	"5.810071"	"233.2"	"100.000"	"47.2949"	"13740"	"13740"	"13720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.1"	""	"342.3"	""	"359.8"	""	"401.0"	""	"394.4"	"357.5"	""	"891"	"47"	"36.000"	"29.000"	"0.000974647803469526"	"21"	"0"	"1.852E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLAWQSLNR"	"[K].sLLAWQSLNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3421"	"0.0000"	"1"	"1"	"1"	"708.91223"	"1416.81719"	"1416.81606"	"0.79"	"0.00056"	"9/92"	"9"	"92"	"6988533.00299072"	"HCD"	"MS2"	"11.1719"	"389.0"	"100.000"	"52.9568"	"16097"	"16097"	"16070"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"582.6"	""	"559.1"	""	"562.4"	""	"547.8"	""	"672.0"	"764.0"	""	"876"	"38"	"36.000"	"29.000"	"0.00721895127488173"	""	"0.0001859"	"0.0003409"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLQSVQVFGR"	"[K].gPLQSVQVFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"708.91260"	"1416.81792"	"1416.81606"	"1.31"	"0.00093"	"10/94"	"10"	"94"	"3260525.57678223"	"HCD"	"MS2"	"2.311838"	"215.6"	"100.000"	"47.5880"	"13908"	"13908"	"13890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.7"	""	"326.8"	""	"332.9"	""	"356.1"	"0.5"	"368.8"	"330.6"	""	"819"	"42"	"36.000"	"29.000"	"0.00287245944702978"	"21"	"0"	"2.348E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILFVPTSAPR"	"[K].sILFVPTSAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"708.92236"	"1416.83745"	"1416.84122"	"-2.66"	"-0.00188"	"6/94"	"6"	"94"	"8733767.05108643"	"HCD"	"MS2"	"25.29984"	"383.3"	"100.000"	"49.9585"	"14825"	"14825"	"14809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"544.3"	""	"516.8"	""	"535.8"	""	"632.9"	""	"705.0"	"699.7"	""	"718"	"41"	"35.000"	"28.000"	"0.00258877585026661"	"27"	"0"	"0.0001026"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILFVPTSAPR"	"[K].sILFVPTSAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.5581"	"0.0000"	"1"	"1"	"1"	"472.95068"	"1416.83750"	"1416.84122"	"-2.62"	"-0.00124"	"13/94"	"13"	"94"	"9787890.56866455"	"HCD"	"MS2"	"48.88122"	"67.9"	"100.000"	"50.2484"	"14991"	"14991"	"14974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.8"	""	"95.3"	""	"93.1"	""	"111.5"	""	"136.0"	"120.5"	""	"718"	"43"	"35.000"	"28.000"	"0.00165613009267176"	""	"0.0001889"	"0.0004322"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILFVPTSAPR"	"[K].sILFVPTSAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"708.92267"	"1416.83806"	"1416.84122"	"-2.23"	"-0.00158"	"6/94"	"6"	"94"	"12286433.2483521"	"HCD"	"MS2"	"32.53518"	"512.7"	"100.000"	"50.2278"	"14983"	"14983"	"14958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"774.0"	""	"730.0"	""	"739.3"	""	"842.4"	"2.9"	"885.4"	"878.1"	""	"728"	"44"	"35.000"	"28.000"	"0.00130647584210782"	""	"0"	"0.0001296"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILFVPTSAPR"	"[K].sILFVPTSAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.5400"	"0.0000"	"1"	"1"	"1"	"472.95090"	"1416.83814"	"1416.84122"	"-2.17"	"-0.00103"	"12/94"	"12"	"94"	"9999500.46862793"	"HCD"	"MS2"	"19.16295"	"79.2"	"100.000"	"50.0273"	"14852"	"14852"	"14840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.3"	""	"102.8"	""	"115.7"	""	"134.9"	""	"143.2"	"141.1"	""	"728"	"51"	"35.000"	"28.000"	"0.000324415341480683"	""	"0.0001889"	"0.0004718"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILFVPTSAPR"	"[K].sILFVPTSAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"472.95093"	"1416.83823"	"1416.84122"	"-2.11"	"-0.00100"	"8/94"	"8"	"94"	"5811687.36102295"	"HCD"	"MS2"	"0"	"94.3"	"100.000"	"50.3136"	"14966"	"14966"	"14956"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.1"	""	"126.1"	""	"136.6"	""	"166.0"	"5.2"	"162.5"	"176.4"	""	"715"	"18"	"35.000"	"28.000"	"0.531221992117605"	"20"	"0.0001889"	"0.001077"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILFVPTSAPR"	"[K].sILFVPTSAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"472.95105"	"1416.83860"	"1416.84122"	"-1.85"	"-0.00087"	"11/94"	"11"	"94"	"6727808.5838623"	"HCD"	"MS2"	"0"	"67.6"	"93.590"	"50.5418"	"15109"	"15109"	"15092"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.9"	""	"89.3"	""	"99.6"	""	"110.1"	"3.5"	"119.1"	"120.9"	""	"715"	"32"	"35.000"	"28.000"	"0.0226608421774351"	"28"	"0.0001859"	"0.0003351"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIALNPLYR"	"[R].dIIALNPLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"472.95111"	"1416.83878"	"1416.84122"	"-1.72"	"-0.00081"	"12/80"	"12"	"80"	"2103571.17095947"	"HCD"	"MS2"	"7.035171"	"60.8"	"100.000"	"60.4495"	"19083"	"19083"	"19065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.4"	""	"87.8"	""	"87.2"	""	"96.6"	"1.4"	"125.6"	"112.9"	""	"719"	"16"	"35.000"	"28.000"	"0.972073031897129"	"15"	"0.0001889"	"0.0006045"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILFVPTSAPR"	"[K].sILFVPTSAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"708.92322"	"1416.83916"	"1416.84122"	"-1.45"	"-0.00103"	"10/94"	"10"	"94"	"11373505.1187744"	"HCD"	"MS2"	"5.382614"	"326.8"	"66.558"	"50.5370"	"15107"	"15107"	"15092"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"501.6"	"2.7"	"463.3"	""	"502.2"	""	"502.1"	""	"555.2"	"565.8"	""	"717"	"42"	"35.000"	"28.000"	"0.00221049308167341"	"28"	"0"	"0.0001145"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIALNPLYR"	"[R].dIIALNPLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"708.92334"	"1416.83940"	"1416.84122"	"-1.28"	"-0.00091"	"6/80"	"6"	"80"	"3154254.67974854"	"HCD"	"MS2"	"52.60181"	"141.2"	"100.000"	"60.4217"	"19125"	"19125"	"19107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.7"	""	"186.5"	""	"192.7"	""	"227.5"	""	"280.2"	"273.4"	""	"715"	"40"	"35.000"	"28.000"	"0.0032529399496603"	"20"	"0.0001308"	"0.0003002"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILFVPTSAPR"	"[K].sILFVPTSAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"708.92340"	"1416.83953"	"1416.84122"	"-1.19"	"-0.00085"	"6/94"	"6"	"94"	"23371468.3552246"	"HCD"	"MS2"	"6.819587"	"262.5"	"28.146"	"50.2540"	"14942"	"14942"	"14924"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"390.2"	""	"385.2"	""	"405.0"	""	"419.6"	""	"443.3"	"441.0"	""	"715"	"45"	"35.000"	"28.000"	"0.00121976465904839"	""	"0.0003146"	"0.001466"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILFVPTSAPR"	"[K].sILFVPTSAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"708.92346"	"1416.83965"	"1416.84122"	"-1.11"	"-0.00078"	"6/94"	"6"	"94"	"2038754.80578613"	"HCD"	"MS2"	"22.7286"	"136.0"	"100.000"	"50.5520"	"15063"	"15063"	"15042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.1"	""	"190.2"	""	"206.3"	""	"219.8"	""	"243.4"	"247.3"	""	"714"	"43"	"35.000"	"28.000"	"0.00189962648558245"	"28"	"0.000494"	"0.002721"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIALNPLYR"	"[R].dIIALNPLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"708.92389"	"1416.84050"	"1416.84122"	"-0.50"	"-0.00036"	"6/80"	"6"	"80"	"1184687.52075195"	"HCD"	"MS2"	"20.54495"	"78.9"	"100.000"	"60.7630"	"19265"	"19265"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.9"	""	"101.3"	""	"99.4"	""	"156.1"	"1.3"	"154.5"	"151.4"	""	"741"	"24"	"35.000"	"28.000"	"0.136391784734558"	"15"	"0.0001889"	"0.0009206"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIALNPLYR"	"[R].dIIALNPLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"708.92432"	"1416.84136"	"1416.84122"	"0.10"	"0.00007"	"6/80"	"6"	"80"	"3413006.69512939"	"HCD"	"MS2"	"50.2527"	"161.7"	"100.000"	"60.2978"	"19021"	"19021"	"19001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"206.7"	""	"215.8"	""	"221.4"	""	"273.9"	""	"296.3"	"319.2"	""	"746"	"41"	"35.000"	"28.000"	"0.00315289009244788"	"20"	"0.0001308"	"0.0002418"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVLEGWK"	"[R].vQVLEGWk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"708.93317"	"1416.85906"	"1416.86151"	"-1.73"	"-0.00123"	"12/68"	"12"	"68"	"2688348.73999023"	"HCD"	"MS2"	"0"	"216.4"	"100.000"	"54.2701"	"16616"	"16616"	"16589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"371.8"	""	"309.8"	""	"329.2"	""	"320.1"	"0.7"	"365.0"	"348.8"	""	"651"	"35"	"35.000"	"28.000"	"0.0104604650532742"	"25"	"0.0001889"	"0.0006764"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVLEGWK"	"[R].vQVLEGWk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"708.93323"	"1416.85918"	"1416.86151"	"-1.64"	"-0.00116"	"12/68"	"12"	"68"	"2780582.13580322"	"HCD"	"MS2"	"27.86562"	"217.3"	"100.000"	"54.0821"	"16486"	"16486"	"16461"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"357.0"	""	"312.2"	""	"315.5"	""	"332.1"	"1.2"	"368.4"	"369.1"	""	"649"	"32"	"35.000"	"28.000"	"0.018932793633683"	"27"	"0.0001889"	"0.0004452"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVLEGWK"	"[R].vQVLEGWk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"472.95831"	"1416.86039"	"1416.86151"	"-0.79"	"-0.00037"	"9/68"	"9"	"68"	"3408353.60595703"	"HCD"	"MS2"	"27.55271"	"118.2"	"100.000"	"54.2725"	"16564"	"16564"	"16541"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.7"	""	"171.5"	""	"191.2"	""	"175.7"	"0.7"	"209.4"	"187.4"	""	"642"	"34"	"35.000"	"28.000"	"0.0118169400539252"	"24"	"0.0001889"	"0.0004535"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVLEGWK"	"[R].vQVLEGWk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"708.93420"	"1416.86113"	"1416.86151"	"-0.26"	"-0.00019"	"12/68"	"12"	"68"	"5788409.67651367"	"HCD"	"MS2"	"0"	"409.7"	"100.000"	"54.5821"	"16743"	"16743"	"16725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"665.7"	""	"579.4"	""	"653.3"	""	"563.7"	""	"734.0"	"681.1"	""	"641"	"36"	"35.000"	"28.000"	"0.00895010301116568"	""	"0.0001889"	"0.0006199"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVLEGWK"	"[R].vQVLEGWk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"708.93445"	"1416.86162"	"1416.86151"	"0.08"	"0.00006"	"12/68"	"12"	"68"	"5562320.58685303"	"HCD"	"MS2"	"0"	"399.7"	"100.000"	"54.3918"	"16612"	"16612"	"16593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"655.9"	""	"567.3"	""	"630.5"	""	"521.3"	"3.0"	"752.2"	"652.8"	""	"641"	"35"	"35.000"	"28.000"	"0.00924332096752078"	"25"	"0.0001889"	"0.0007042"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVLEGWK"	"[R].vQVLEGWk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"472.95886"	"1416.86203"	"1416.86151"	"0.37"	"0.00018"	"9/68"	"9"	"68"	"3408767.28106689"	"HCD"	"MS2"	"32.0279"	"116.9"	"100.000"	"54.4145"	"16675"	"16675"	"16651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.0"	""	"184.3"	""	"183.3"	""	"155.0"	""	"219.3"	"192.8"	""	"634"	"31"	"35.000"	"28.000"	"0.0238813713703589"	"23"	"0.0001889"	"0.0004707"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILETLIK"	"[R].eILETLIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"708.95740"	"1416.90752"	"1416.90779"	"-0.19"	"-0.00014"	"7/64"	"7"	"64"	"2262923.50402832"	"HCD"	"MS2"	"30.56864"	"176.0"	"100.000"	"63.3006"	"20301"	"20301"	"20275"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.9"	""	"259.8"	""	"268.6"	""	"283.9"	""	"296.0"	"315.6"	""	"395"	"27"	"32.000"	"25.000"	"0.0384208616120476"	""	"0.0001889"	"0.0004573"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILETLIK"	"[R].eILETLIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"P82808"	"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Rattus norvegicus OX=10116 GN=Gfpt1 PE=1 SV=3"	"0"	"2"	"2"	"0.4889"	"0.0000"	"1"	"1"	"1"	"708.95807"	"1416.90886"	"1416.90779"	"0.76"	"0.00054"	"14/64"	"14"	"64"	"2313247.04486084"	"HCD"	"MS2"	"23.15723"	"164.9"	"100.000"	"63.2100"	"20211"	"20211"	"20185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.4"	""	"225.5"	""	"249.8"	""	"253.1"	"1.6"	"282.0"	"301.9"	""	"392"	"45"	"32.000"	"25.000"	"0.000593275031907855"	""	"0.0001889"	"0.0005738"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILIPVFK"	"[K].eILIPVFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"472.97797"	"1416.91935"	"1416.92304"	"-2.61"	"-0.00123"	"8/56"	"8"	"56"	"2136802.1517334"	"HCD"	"MS2"	"0"	"76.9"	"100.000"	"69.6859"	"22847"	"22847"	"22826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.7"	""	"100.6"	""	"115.2"	""	"112.0"	""	"135.8"	"153.0"	""	"289"	"29"	"31.000"	"24.000"	"0.0164387142801486"	"21"	"0.001217"	"0.01755"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILIPVFK"	"[K].eILIPVFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"708.96399"	"1416.92070"	"1416.92304"	"-1.65"	"-0.00117"	"6/56"	"6"	"56"	"3378762.45233154"	"HCD"	"MS2"	"0"	"193.8"	"100.000"	"69.6469"	"22883"	"22883"	"22873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.7"	""	"251.9"	""	"273.3"	""	"295.9"	""	"335.1"	"403.0"	""	"289"	"30"	"31.000"	"24.000"	"0.0151310075193355"	""	"0.0001889"	"0.000727"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILIPVFK"	"[K].eILIPVFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"708.96405"	"1416.92082"	"1416.92304"	"-1.57"	"-0.00111"	"12/56"	"12"	"56"	"9794687.11816406"	"HCD"	"MS2"	"27.14911"	"541.1"	"100.000"	"69.2789"	"22732"	"22732"	"22714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"822.1"	""	"726.7"	""	"784.0"	""	"873.2"	"1.5"	"889.6"	"1023.5"	""	"289"	"31"	"31.000"	"24.000"	"0.0103482722775764"	""	"0.0001889"	"0.001005"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILIPVFK"	"[K].eILIPVFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"708.96448"	"1416.92168"	"1416.92304"	"-0.96"	"-0.00068"	"6/56"	"6"	"56"	"9861174.03167725"	"HCD"	"MS2"	"29.68771"	"583.1"	"100.000"	"69.4006"	"22731"	"22731"	"22714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"947.1"	""	"815.2"	""	"836.0"	""	"947.6"	""	"916.3"	"1055.4"	""	"289"	"29"	"31.000"	"24.000"	"0.018787450402581"	""	"0.0001889"	"0.001021"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILIPVFK"	"[K].eILIPVFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"708.96454"	"1416.92180"	"1416.92304"	"-0.88"	"-0.00062"	"7/56"	"7"	"56"	"4192072.34008789"	"HCD"	"MS2"	"4.889862"	"241.7"	"100.000"	"69.7455"	"22871"	"22871"	"22858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.4"	""	"311.1"	""	"356.6"	""	"360.8"	""	"428.5"	"484.7"	""	"289"	"30"	"31.000"	"24.000"	"0.0149922856085703"	""	"0.0001889"	"0.0005828"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILIPVFK"	"[K].eILIPVFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"472.97879"	"1416.92182"	"1416.92304"	"-0.87"	"-0.00041"	"9/56"	"9"	"56"	"4035453.06158447"	"HCD"	"MS2"	"6.88847"	"118.1"	"100.000"	"69.3088"	"22745"	"22745"	"22714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.1"	""	"161.4"	""	"169.1"	""	"188.9"	""	"193.2"	"222.2"	""	"289"	"33"	"31.000"	"24.000"	"0.00803281651755734"	""	"0.000523"	"0.003023"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILIPVFK"	"[K].eILIPVFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"708.96472"	"1416.92217"	"1416.92304"	"-0.62"	"-0.00044"	"7/56"	"7"	"56"	"693769.371337891"	"HCD"	"MS2"	"49.79547"	"50.8"	"100.000"	"70.1240"	"23026"	"23026"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.7"	""	"66.8"	""	"73.0"	""	"89.1"	""	"80.7"	"98.2"	""	"267"	"14"	"31.000"	"24.000"	"0.543852670868491"	"24"	"0.002829"	"0.04784"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILIPVFK"	"[K].eILIPVFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"472.97906"	"1416.92264"	"1416.92304"	"-0.28"	"-0.00013"	"8/56"	"8"	"56"	"2491377.43682861"	"HCD"	"MS2"	"0"	"85.1"	"100.000"	"69.3889"	"22726"	"22726"	"22698"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.8"	""	"124.0"	""	"113.9"	""	"145.0"	"0.6"	"136.6"	"155.2"	""	"203"	"29"	"30.000"	"23.000"	"0.0127780929297108"	"23"	"0.0003839"	"0.001792"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"709.33429"	"1417.66130"	"1417.66193"	"-0.44"	"-0.00031"	"8/80"	"8"	"80"	"786102.468933105"	"HCD"	"MS2"	"21.88209"	"45.1"	"100.000"	"34.7445"	"8621"	"8621"	"8590"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.7"	""	"57.0"	""	"59.4"	""	"71.6"	""	"83.3"	"84.3"	""	"293"	"24"	"31.000"	"24.000"	"0.0648391965511248"	""	"0.003788"	"0.09322"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YCAGWADK"	"[K].ycAGWADk.[I]"	"N-Term(TMT6plex); C2(Methylthio); K8(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"709.35284"	"1417.69841"	"1417.70085"	"-1.72"	"-0.00122"	"7/56"	"7"	"56"	"3238675.70477295"	"HCD"	"MS2"	"0"	"319.2"	"100.000"	"48.4469"	"14259"	"14259"	"14239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"463.7"	""	"498.0"	""	"512.4"	""	"413.2"	"0.2"	"517.4"	"615.4"	""	"551"	"41"	"34.000"	"27.000"	"0.00212873501193866"	"19"	"0.0001889"	"0.000774"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YCAGWADK"	"[K].ycAGWADk.[I]"	"N-Term(TMT6plex); C2(Methylthio); K8(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"709.35303"	"1417.69878"	"1417.70085"	"-1.46"	"-0.00104"	"7/56"	"7"	"56"	"3246642.69329834"	"HCD"	"MS2"	"6.390589"	"319.3"	"100.000"	"48.1694"	"14098"	"14098"	"14080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"439.2"	""	"472.3"	""	"541.9"	""	"411.8"	""	"554.7"	"604.3"	""	"555"	"41"	"34.000"	"27.000"	"0.00208575353090052"	"19"	"0.0001889"	"0.0005488"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YCAGWADK"	"[K].ycAGWADk.[I]"	"N-Term(TMT6plex); C2(Methylthio); K8(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"709.35321"	"1417.69914"	"1417.70085"	"-1.20"	"-0.00085"	"7/56"	"7"	"56"	"4766916.90917969"	"HCD"	"MS2"	"12.90339"	"427.8"	"100.000"	"47.8830"	"13981"	"13981"	"13960"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"602.3"	""	"673.9"	""	"699.4"	""	"543.8"	"1.6"	"736.7"	"791.1"	""	"565"	"41"	"34.000"	"27.000"	"0.00235514934655047"	"19"	"0.0001889"	"0.0006648"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YCAGWADK"	"[K].ycAGWADk.[I]"	"N-Term(TMT6plex); C2(Methylthio); K8(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"709.35327"	"1417.69927"	"1417.70085"	"-1.12"	"-0.00079"	"7/56"	"7"	"56"	"5223817.99499512"	"HCD"	"MS2"	"14.75589"	"484.6"	"100.000"	"48.1398"	"14134"	"14134"	"14114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"704.9"	""	"756.9"	""	"817.9"	""	"629.8"	""	"793.0"	"883.0"	""	"565"	"41"	"34.000"	"27.000"	"0.00240446495792171"	"19"	"0.0001889"	"0.0009696"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDLLEEGLR"	"[R].lMDLLEEGLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"709.39917"	"1417.79106"	"1417.79222"	"-0.81"	"-0.00058"	"8/80"	"8"	"80"	"735053.319458008"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"78.9914"	"26634"	"26634"	"26609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.5"	""	"46.0"	""	"63.1"	""	"45.0"	""	"89.7"	"100.4"	""	"989"	"56"	"36.000"	"29.000"	"0.000138728693396712"	"23"	"0"	"1.532E-05"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDLLEEGLR"	"[R].lMDLLEEGLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"709.39960"	"1417.79192"	"1417.79222"	"-0.21"	"-0.00015"	"11/80"	"11"	"80"	"599853.945922852"	"HCD"	"MS2"	"30.64683"	"34.7"	"100.000"	"78.9422"	"26665"	"26665"	"26639"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.3"	""	"53.1"	""	"43.5"	""	"44.1"	""	"72.8"	"70.7"	""	"994"	"47"	"36.000"	"29.000"	"0.00101942760287631"	"23"	"0"	"2.954E-05"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HWDFNIK"	"[K].hWDFNIk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"473.27127"	"1417.79926"	"1417.79924"	"0.01"	"0.00001"	"7/52"	"7"	"52"	"7412547.15393066"	"HCD"	"MS2"	"38.95768"	"352.9"	"100.000"	"42.7352"	"11936"	"11936"	"11907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"561.0"	""	"410.5"	""	"428.1"	""	"586.5"	"19.1"	"654.5"	"684.9"	""	"1022"	"10"	"37.000"	"30.000"	"4.98219704873585"	"18"	"0.0009404"	"0.01001"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSYYSIAK"	"[K].qSYYSIAk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"709.40857"	"1417.80986"	"1417.80914"	"0.51"	"0.00036"	"7/76"	"7"	"76"	"863715.662353516"	"HCD"	"MS2"	"0"	"98.7"	"100.000"	"36.8335"	"9478"	"9478"	"9450"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.3"	""	"125.4"	""	"141.5"	""	"150.0"	"2.9"	"181.8"	"188.4"	""	"1019"	"38"	"37.000"	"30.000"	"0.00781887352736241"	"21"	"0"	"0.0001457"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVLEGWK"	"[R].vqVLEGWk.[K]"	"N-Term(TMT6plex); Q2(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"473.29245"	"1417.86280"	"1417.84552"	"12.18"	"0.00576"	"10/68"	"10"	"68"	"1985464.86578369"	"HCD"	"MS2"	"41.30122"	"82.3"	"100.000"	"54.2083"	"16538"	"16538"	"16509"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.0"	""	"122.9"	""	"119.8"	""	"128.1"	""	"145.8"	"146.5"	""	"739"	"20"	"35.000"	"28.000"	"0.39683908786009"	"19"	"0.002772"	"0.04468"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISQATAQIK"	"[R].iSQATAQIk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"5"	"709.44226"	"1417.87724"	"1417.87789"	"-0.45"	"-0.00032"	"7/82"	"7"	"82"	"878222.192382813"	"HCD"	"MS2"	"41.82411"	"87.7"	"100.000"	"35.7125"	"9061"	"9061"	"9033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.7"	""	"130.2"	""	"145.4"	""	"121.8"	""	"153.2"	"134.1"	""	"583"	"9"	"34.000"	"27.000"	"4.03309599470275"	"18"	"0.002829"	"0.04825"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHALVVGPGLGR"	"[R].lHALVVGPGLGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"473.29932"	"1417.88340"	"1417.88408"	"-0.49"	"-0.00023"	"8/90"	"8"	"90"	"7566889.80889893"	"HCD"	"MS2"	"26.87324"	"214.1"	"86.167"	"40.2046"	"10902"	"10902"	"10877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.9"	""	"296.2"	""	"320.5"	""	"357.9"	""	"385.8"	"377.6"	""	"492"	"15"	"33.000"	"26.000"	"0.792382922655726"	"19"	"0"	"0.0001286"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKLPTGK"	"[R].skLPTGk.[N]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QXU8"	"Cytoplasmic dynein 1 light intermediate chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1li1 PE=1 SV=1"	"Q9QXU8"	"Cytoplasmic dynein 1 light intermediate chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1li1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"473.31595"	"1417.93329"	"1417.93456"	"-0.90"	"-0.00042"	"6/66"	"6"	"66"	"9536448.73956299"	"HCD"	"MS2"	"50.58047"	"571.4"	"63.875"	"28.7130"	"6227"	"6227"	"6220"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"779.7"	""	"743.1"	""	"804.5"	""	"987.4"	""	"1046.6"	"1061.7"	""	"145"	"2"	"28.000"	"21.000"	"4.23972811004748"	"13"	"0.008648"	"0.3723"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWNAYPYCR"	"[K].aWNAYPYcR.[T]"	"N-Term(TMT6plex); C8(Methylthio)"	"2"	"2"	"P53812; P16446"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2;Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P53812; P16446"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2; Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"709.83038"	"1418.65349"	"1418.65468"	"-0.84"	"-0.00059"	"5/78"	"5"	"78"	"1560712.36828613"	"HCD"	"MS2"	"36.93501"	"137.3"	"100.000"	"49.4478"	"14622"	"14622"	"14591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.8"	""	"183.4"	""	"199.5"	""	"209.6"	"1.3"	"248.9"	"266.6"	""	"246"	"10"	"30.000"	"23.000"	"1.22717107850174"	"16"	"0.001587"	"0.02128"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGFYTHVFR"	"[K].yGFYTHVFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"709.87445"	"1418.74162"	"1418.74184"	"-0.15"	"-0.00011"	"5/64"	"5"	"64"	"891689.401123047"	"HCD"	"MS2"	"30.41719"	"97.6"	"100.000"	"40.6966"	"11060"	"11060"	"11029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.9"	""	"128.7"	""	"128.5"	""	"160.0"	""	"207.0"	"180.5"	""	"857"	"10"	"36.000"	"29.000"	"4.07334154081716"	"18"	"0.0004166"	"0.002454"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGFYTHVFR"	"[K].yGFYTHVFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"473.58542"	"1418.74170"	"1418.74184"	"-0.09"	"-0.00004"	"8/64"	"8"	"64"	"22971218.8632202"	"HCD"	"MS2"	"27.53571"	"348.7"	"100.000"	"40.5752"	"11010"	"11010"	"10981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"508.9"	""	"552.9"	""	"507.9"	""	"553.4"	""	"584.0"	"592.3"	""	"857"	"41"	"36.000"	"29.000"	"0.00354773217150735"	"21"	"0"	"9.688E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGFYTHVFR"	"[K].yGFYTHVFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"473.58545"	"1418.74179"	"1418.74184"	"-0.03"	"-0.00001"	"8/64"	"8"	"64"	"24048463.9172974"	"HCD"	"MS2"	"17.57302"	"401.3"	"99.708"	"40.7540"	"11127"	"11127"	"11101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"599.2"	""	"647.3"	""	"574.5"	""	"632.5"	""	"656.4"	"691.5"	""	"858"	"40"	"36.000"	"29.000"	"0.00404070636908299"	"22"	"0"	"0.0001164"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGFYTHVFR"	"[K].yGFYTHVFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"709.87494"	"1418.74260"	"1418.74184"	"0.54"	"0.00038"	"6/64"	"6"	"64"	"1264207.97180176"	"HCD"	"MS2"	"26.63634"	"114.7"	"100.000"	"40.8365"	"11161"	"11161"	"11133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.9"	""	"147.6"	""	"161.9"	""	"178.4"	"0.1"	"224.3"	"212.6"	""	"847"	"21"	"36.000"	"29.000"	"0.313944887190938"	"15"	"0.0002277"	"0.001186"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFQIGSPWR"	"[R].qAFQIGSPWR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"473.59589"	"1418.77311"	"1418.77420"	"-0.77"	"-0.00036"	"7/90"	"7"	"90"	"4289928.70581055"	"HCD"	"MS2"	"17.63736"	"63.6"	"100.000"	"48.8197"	"14365"	"14365"	"14335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.7"	""	"83.5"	""	"96.0"	""	"107.8"	"3.9"	"127.5"	"101.1"	""	"1048"	"24"	"37.000"	"30.000"	"0.199678491458337"	"21"	"0"	"0.0001486"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFQIGSPWR"	"[R].qAFQIGSPWR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"709.89032"	"1418.77336"	"1418.77420"	"-0.59"	"-0.00042"	"7/90"	"7"	"90"	"14548973.2056885"	"HCD"	"MS2"	"5.55737"	"683.4"	"100.000"	"48.6800"	"14307"	"14307"	"14287"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1058.8"	""	"1004.5"	""	"1029.6"	""	"1097.4"	"6.7"	"1047.4"	"1216.8"	""	"1047"	"42"	"37.000"	"30.000"	"0.00337999988899642"	"22"	"0"	"0.0001384"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFQIGSPWR"	"[R].qAFQIGSPWR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"473.59607"	"1418.77365"	"1418.77420"	"-0.38"	"-0.00018"	"7/90"	"7"	"90"	"5102796.3427124"	"HCD"	"MS2"	"9.711648"	"67.0"	"100.000"	"49.0926"	"14524"	"14524"	"14495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.6"	""	"98.9"	""	"99.6"	""	"114.3"	"4.2"	"120.1"	"112.1"	""	"1046"	"25"	"37.000"	"30.000"	"0.154704052000646"	"22"	"0"	"0.0001656"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFQIGSPWR"	"[R].qAFQIGSPWR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"709.89050"	"1418.77373"	"1418.77420"	"-0.33"	"-0.00024"	"7/90"	"7"	"90"	"6025785.66918945"	"HCD"	"MS2"	"2.297898"	"287.9"	"100.000"	"48.9876"	"14433"	"14433"	"14415"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"459.3"	""	"399.7"	""	"438.3"	""	"431.6"	"1.4"	"440.1"	"552.4"	""	"1046"	"42"	"37.000"	"30.000"	"0.00349543868888385"	"23"	"0"	"0.0001388"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFQIGSPWR"	"[R].qAFQIGSPWR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"709.89111"	"1418.77495"	"1418.77420"	"0.53"	"0.00038"	"7/90"	"7"	"90"	"6374817.93878174"	"HCD"	"MS2"	"2.332422"	"287.4"	"97.375"	"49.2626"	"14593"	"14593"	"14574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"441.3"	""	"412.0"	""	"445.5"	""	"414.0"	"1.4"	"463.6"	"540.7"	""	"1048"	"40"	"37.000"	"30.000"	"0.00500416115075232"	"21"	"0"	"0.0001319"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFQIGSPWR"	"[R].qAFQIGSPWR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"709.89142"	"1418.77556"	"1418.77420"	"0.96"	"0.00068"	"7/90"	"7"	"90"	"9543054.1708374"	"HCD"	"MS2"	"19.85364"	"456.4"	"100.000"	"48.9407"	"14462"	"14462"	"14431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"686.9"	""	"636.6"	""	"696.7"	""	"734.8"	""	"728.2"	"836.8"	""	"1054"	"42"	"37.000"	"30.000"	"0.00339477202926499"	"22"	"0.0001859"	"0.0003492"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFLDYFK"	"[K].qFLDYFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"709.90753"	"1418.80779"	"1418.80841"	"-0.44"	"-0.00031"	"12/60"	"12"	"60"	"3273649.31286621"	"HCD"	"MS2"	"24.78906"	"293.3"	"100.000"	"62.7865"	"20038"	"20038"	"20009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"429.9"	""	"373.9"	""	"366.3"	""	"539.2"	""	"527.1"	"544.9"	""	"1001"	"32"	"36.000"	"30.000"	"0.0320187285159065"	""	"0.0003571"	"0.001497"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFLDYFK"	"[K].qFLDYFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.3030"	"0.0000"	"1"	"1"	"1"	"709.90771"	"1418.80815"	"1418.80841"	"-0.18"	"-0.00013"	"12/60"	"12"	"60"	"3710024.02062988"	"HCD"	"MS2"	"12.18486"	"335.3"	"100.000"	"62.8911"	"20133"	"20133"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"521.4"	""	"414.5"	""	"438.2"	""	"592.3"	"2.6"	"614.1"	"592.6"	""	"1001"	"33"	"36.000"	"30.000"	"0.0228772638902245"	""	"0.000523"	"0.003012"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QFLDYFK"	"[K].qFLDYFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.0345"	"0.0000"	"1"	"1"	"1"	"709.90881"	"1418.81035"	"1418.80841"	"1.37"	"0.00097"	"6/60"	"6"	"60"	"2814526.37591553"	"HCD"	"MS2"	"7.291958"	"244.4"	"100.000"	"63.0766"	"20156"	"20156"	"20137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"382.1"	""	"304.2"	""	"336.2"	""	"397.8"	"4.7"	"445.5"	"443.8"	""	"1043"	"29"	"37.000"	"30.000"	"0.0591908140373112"	"29"	"0.0001889"	"0.0006061"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGGTPLFTLR"	"[K].vEGGTPLFTLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"709.91241"	"1418.81755"	"1418.82048"	"-2.06"	"-0.00146"	"9/94"	"9"	"94"	"3114703.48126221"	"HCD"	"MS2"	"22.36236"	"181.7"	"100.000"	"52.1350"	"15711"	"15711"	"15682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"236.5"	""	"293.4"	""	"215.4"	""	"291.9"	"6.9"	"317.8"	"360.1"	""	"979"	"42"	"36.000"	"29.000"	"0.00277813084347484"	"19"	"7.476E-05"	"0.0001882"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGGTPLFTLR"	"[K].vEGGTPLFTLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"709.91339"	"1418.81951"	"1418.82048"	"-0.69"	"-0.00049"	"9/94"	"9"	"94"	"3598232.46716309"	"HCD"	"MS2"	"7.529812"	"218.3"	"100.000"	"52.3543"	"15850"	"15850"	"15830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"265.9"	""	"331.5"	""	"266.2"	""	"353.2"	""	"407.5"	"448.0"	""	"984"	"45"	"36.000"	"29.000"	"0.00159942950313634"	"23"	"0"	"2.08E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLIMQLLR.[D]"	"N-Term(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6038"	"0.0000"	"1"	"1"	"1"	"473.61212"	"1418.82181"	"1418.82385"	"-1.44"	"-0.00068"	"14/82"	"14"	"82"	"4506938.7388916"	"HCD"	"MS2"	"9.301935"	"31.6"	"100.000"	"72.1984"	"23924"	"23924"	"23903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.3"	""	"34.8"	""	"43.8"	""	"43.9"	"0.6"	"73.8"	"70.8"	""	"968"	"53"	"36.000"	"29.000"	"0.000219202428673353"	""	"0"	"5.968E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLIMQLLR.[D]"	"N-Term(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"473.61234"	"1418.82245"	"1418.82385"	"-0.99"	"-0.00047"	"7/82"	"7"	"82"	"2775853.80010986"	"HCD"	"MS2"	"2.270193"	"22.6"	"100.000"	"72.5595"	"24020"	"24020"	"24001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.0"	""	"22.5"	""	"25.6"	""	"39.3"	""	"52.6"	"52.9"	""	"939"	"54"	"36.000"	"29.000"	"0.000206840508416327"	""	"0"	"7.817E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLIMQLLR.[D]"	"N-Term(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"709.91492"	"1418.82256"	"1418.82385"	"-0.91"	"-0.00065"	"7/82"	"7"	"82"	"390092.211791992"	"HCD"	"MS2"	"46.05272"	"20.2"	"100.000"	"80.8860"	"27407"	"27407"	"27376"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.4"	""	"19.6"	""	"25.2"	""	"32.8"	""	"43.7"	"44.5"	""	"939"	"33"	"36.000"	"29.000"	"0.0213616894240448"	"27"	"0.001058"	"0.01382"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLIMQLLR.[D]"	"N-Term(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"473.61240"	"1418.82264"	"1418.82385"	"-0.86"	"-0.00041"	"13/82"	"13"	"82"	"3570615.72033691"	"HCD"	"MS2"	"22.11591"	"25.9"	"100.000"	"72.2343"	"23888"	"23888"	"23857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.2"	""	"28.0"	""	"34.0"	""	"42.1"	"0.5"	"57.6"	"54.4"	""	"939"	"60"	"36.000"	"29.000"	"5.19559866577514E-05"	""	"0"	"4.807E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLIMQLLR.[D]"	"N-Term(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"709.91498"	"1418.82268"	"1418.82385"	"-0.83"	"-0.00059"	"8/82"	"8"	"82"	"7514394.68438721"	"HCD"	"MS2"	"17.71734"	"323.4"	"100.000"	"72.1085"	"23888"	"23888"	"23871"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"340.5"	""	"323.0"	""	"390.3"	""	"513.0"	"5.7"	"708.4"	"796.4"	""	"937"	"53"	"36.000"	"29.000"	"0.000241941069003965"	""	"0"	"7.642E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLIMQLLR.[D]"	"N-Term(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"473.61243"	"1418.82273"	"1418.82385"	"-0.79"	"-0.00037"	"13/82"	"13"	"82"	"2765118.26025391"	"HCD"	"MS2"	"2.505418"	"22.1"	"100.000"	"72.5120"	"24052"	"24052"	"24031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.4"	""	"26.3"	""	"25.1"	""	"35.4"	""	"52.7"	"51.3"	""	"937"	"68"	"36.000"	"29.000"	"7.63325191291711E-06"	""	"0"	"0.000174"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLIMQLLR.[D]"	"N-Term(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6981"	"0.0000"	"1"	"1"	"1"	"709.91504"	"1418.82280"	"1418.82385"	"-0.74"	"-0.00053"	"8/82"	"8"	"82"	"69813419.5561523"	"HCD"	"MS2"	"0.7316246"	"251.5"	"8.827"	"72.4219"	"24016"	"24016"	"23999"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.6"	""	"228.5"	""	"303.7"	""	"396.7"	"0.2"	"586.5"	"633.3"	""	"937"	"53"	"36.000"	"29.000"	"0.000224755120686289"	""	"0.0001889"	"0.0004018"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLIMQLLR.[D]"	"N-Term(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"709.91516"	"1418.82305"	"1418.82385"	"-0.57"	"-0.00040"	"5/82"	"5"	"82"	"360337.037597656"	"HCD"	"MS2"	"50.45842"	"20.1"	"100.000"	"80.8670"	"27450"	"27450"	"27422"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.6"	""	"27.9"	""	"30.9"	""	"26.9"	""	"37.6"	"41.8"	""	"937"	"24"	"36.000"	"29.000"	"0.176892571448557"	"22"	"0.003286"	"0.07258"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLIMQLLR.[D]"	"N-Term(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"709.91626"	"1418.82524"	"1418.82385"	"0.98"	"0.00070"	"7/82"	"7"	"82"	"4240882.07672119"	"HCD"	"MS2"	"42.12231"	"193.2"	"100.000"	"72.1282"	"23844"	"23844"	"23825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"201.7"	""	"188.5"	""	"259.7"	""	"306.5"	"4.6"	"374.3"	"502.0"	""	"900"	"42"	"36.000"	"29.000"	"0.00299372920290783"	"27"	"0"	"0.0001472"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLIMQLLR.[D]"	"N-Term(TMT6plex)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"709.91760"	"1418.82793"	"1418.82385"	"2.87"	"0.00204"	"8/82"	"8"	"82"	"58312605.7368164"	"HCD"	"MS2"	"0.5709484"	"310.8"	"13.142"	"72.4743"	"23986"	"23986"	"23969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.3"	""	"303.1"	""	"363.7"	""	"509.1"	""	"680.1"	"780.2"	""	"872"	"53"	"36.000"	"29.000"	"0.000209163783605597"	""	"0.0001889"	"0.0005153"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVALWDTK"	"[R].qVALWDTk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"709.92395"	"1418.84062"	"1418.84077"	"-0.10"	"-0.00007"	"7/72"	"7"	"72"	"9292724.69818115"	"HCD"	"MS2"	"12.26093"	"681.9"	"100.000"	"45.3773"	"13009"	"13009"	"12987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1277.4"	""	"841.3"	""	"861.9"	""	"1063.7"	"2.7"	"1211.9"	"1193.0"	""	"816"	"48"	"36.000"	"29.000"	"0.000667821140742546"	"26"	"0.0001889"	"0.0006038"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVALWDTK"	"[R].qVALWDTk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"709.92419"	"1418.84111"	"1418.84077"	"0.24"	"0.00017"	"7/72"	"7"	"72"	"11943068.0230103"	"HCD"	"MS2"	"9.357822"	"856.6"	"100.000"	"45.1615"	"12872"	"12872"	"12848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1646.0"	""	"1039.1"	""	"1068.0"	""	"1339.0"	"5.3"	"1525.9"	"1481.7"	""	"801"	"46"	"36.000"	"29.000"	"0.000974097705634062"	"25"	"0.0001889"	"0.0007108"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RKPGVFTR"	"[R].rkPGVFTR.[V]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P32038"	"Complement factor D OS=Rattus norvegicus OX=10116 GN=Cfd PE=1 SV=2"	"P32038"	"Complement factor D OS=Rattus norvegicus OX=10116 GN=Cfd PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"355.48059"	"1418.90053"	"1418.89962"	"0.64"	"0.00023"	"4/70"	"4"	"70"	"6363614.02661133"	"HCD"	"MS2"	"27.90797"	"344.6"	"100.000"	"25.0125"	"4739"	"4739"	"4716"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"528.9"	""	"550.7"	""	"484.7"	""	"539.9"	"4.7"	"589.0"	"561.8"	""	"353"	"7"	"32.000"	"25.000"	"3.90611216245395"	"13"	"0.006155"	"0.2215"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFNYAMK"	"[R].tSFNYAMk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"710.38690"	"1419.76653"	"1419.77064"	"-2.90"	"-0.00206"	"7/66"	"7"	"66"	"8572713.89996338"	"HCD"	"MS2"	"17.83901"	"773.7"	"100.000"	"39.5467"	"10635"	"10635"	"10606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1263.8"	""	"1098.9"	""	"1198.6"	""	"1093.6"	"4.2"	"1417.5"	"1243.8"	""	"994"	"41"	"36.000"	"29.000"	"0.0038579481696446"	""	"0.0002277"	"0.001262"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFNYAMK"	"[R].tSFNYAMk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"710.38867"	"1419.77007"	"1419.77064"	"-0.41"	"-0.00029"	"7/66"	"7"	"66"	"10204089.6757813"	"HCD"	"MS2"	"4.154274"	"904.8"	"100.000"	"39.4579"	"10555"	"10555"	"10534"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1459.2"	""	"1276.7"	""	"1385.4"	""	"1260.4"	"4.9"	"1697.9"	"1479.4"	""	"1003"	"41"	"37.000"	"30.000"	"0.00379551696853019"	"30"	"0.0001889"	"0.0007222"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVYDAHTK"	"[K].qVYDAHTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.4706"	"0.0000"	"1"	"1"	"1"	"473.93738"	"1419.79758"	"1419.79963"	"-1.45"	"-0.00068"	"7/76"	"7"	"76"	"2954131.13500977"	"HCD"	"MS2"	"45.14198"	"209.2"	"100.000"	"25.3497"	"4877"	"4877"	"4855"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"271.6"	""	"244.2"	""	"237.8"	""	"349.7"	"2.1"	"442.9"	"439.2"	""	"1062"	"17"	"37.000"	"30.000"	"0.986494165653693"	"22"	"0.0002277"	"0.001165"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVYDAHTK"	"[K].qVYDAHTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"473.93768"	"1419.79850"	"1419.79963"	"-0.80"	"-0.00038"	"9/76"	"9"	"76"	"6170309.54492188"	"HCD"	"MS2"	"15.84708"	"339.8"	"100.000"	"25.2201"	"4789"	"4789"	"4768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"404.4"	""	"382.9"	""	"351.6"	""	"597.4"	"4.0"	"719.9"	"770.6"	""	"1065"	"27"	"37.000"	"30.000"	"0.0968990707209817"	"24"	"0.0001308"	"0.0002658"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAMNVGK"	"[R].vNLAmNVGk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.42096"	"1419.83464"	"1419.83939"	"-3.35"	"-0.00237"	"11/80"	"11"	"80"	"1939335.14306641"	"HCD"	"MS2"	"0"	"158.5"	"100.000"	"37.3715"	"9742"	"9742"	"9713"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"217.2"	""	"202.2"	""	"210.1"	""	"287.4"	""	"295.3"	"291.6"	""	"917"	"16"	"36.000"	"29.000"	"1.16235647708329"	"13"	"0.003818"	"0.09454"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAMNVGK"	"[R].vNLAmNVGk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"710.42242"	"1419.83757"	"1419.83939"	"-1.28"	"-0.00091"	"11/80"	"11"	"80"	"7727856.1987915"	"HCD"	"MS2"	"0"	"410.6"	"100.000"	"37.0605"	"9571"	"9571"	"9546"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"472.1"	""	"415.9"	""	"479.2"	""	"1113.3"	""	"696.7"	"714.9"	""	"909"	"29"	"36.000"	"29.000"	"0.0554030772711351"	"17"	"0.0001889"	"0.00048"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLAMNVGK"	"[R].vNLAmNVGk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.42267"	"1419.83806"	"1419.83939"	"-0.94"	"-0.00067"	"7/80"	"7"	"80"	"7133309.35650635"	"HCD"	"MS2"	"0"	"380.9"	"100.000"	"37.1838"	"9665"	"9665"	"9638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"472.2"	""	"413.3"	""	"406.0"	""	"1008.3"	""	"621.4"	"687.7"	""	"854"	"28"	"36.000"	"29.000"	"0.0656792031409396"	"14"	"0.0001889"	"0.0004178"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSQVVAGTK"	"[K].aTSQVVAGTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.9114"	"0.0000"	"1"	"1"	"1"	"710.43134"	"1419.85539"	"1419.85715"	"-1.24"	"-0.00088"	"9/98"	"9"	"98"	"670156.329589844"	"HCD"	"MS2"	"0"	"50.3"	"100.000"	"29.2420"	"6422"	"6422"	"6403"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.9"	""	"84.3"	""	"33.6"	""	"100.0"	"1.8"	"98.3"	"73.1"	""	"646"	"79"	"35.000"	"28.000"	"4.12289735246064E-07"	"25"	"0"	"5.453E-06"	"1.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATGNTILGK"	"[K].sATGNTILGk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KLG2"	"GTPase IMAP family member 8 OS=Rattus norvegicus OX=10116 GN=Gimap8 PE=2 SV=1"	"Q4KLG2"	"GTPase IMAP family member 8 OS=Rattus norvegicus OX=10116 GN=Gimap8 PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"710.43182"	"1419.85637"	"1419.85715"	"-0.55"	"-0.00039"	"15/92"	"15"	"92"	"1165928.69067383"	"HCD"	"MS2"	"0"	"112.0"	"100.000"	"35.5127"	"8936"	"8936"	"8907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.0"	""	"132.6"	""	"140.5"	""	"210.9"	"1.9"	"229.4"	"223.3"	""	"648"	"30"	"35.000"	"28.000"	"0.0337710847123431"	"17"	"0.0001308"	"0.0003021"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSQVVAGTK"	"[K].aTSQVVAGTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"710.43231"	"1419.85735"	"1419.85715"	"0.14"	"0.00010"	"18/98"	"18"	"98"	"768093.461914063"	"HCD"	"MS2"	"0"	"58.5"	"100.000"	"29.2183"	"6371"	"6371"	"6346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.3"	""	"95.9"	""	"38.5"	""	"109.6"	""	"115.3"	"92.5"	""	"630"	"80"	"34.000"	"27.000"	"3.21595937367919E-07"	""	"0"	"4.516E-06"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATGNTILGK"	"[K].sATGNTILGk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KLG2"	"GTPase IMAP family member 8 OS=Rattus norvegicus OX=10116 GN=Gimap8 PE=2 SV=1"	"Q4KLG2"	"GTPase IMAP family member 8 OS=Rattus norvegicus OX=10116 GN=Gimap8 PE=2 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"710.43286"	"1419.85845"	"1419.85715"	"0.91"	"0.00065"	"9/92"	"9"	"92"	"1358050.41882324"	"HCD"	"MS2"	"0"	"118.9"	"100.000"	"35.5520"	"8995"	"8995"	"8970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.2"	""	"152.6"	""	"144.0"	""	"229.9"	"4.2"	"249.8"	"214.2"	""	"625"	"43"	"34.000"	"27.000"	"0.00145495654225925"	"23"	"0"	"0.0001164"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLDSAAK"	"[K].kLDSAAk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"1"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"710.45935"	"1419.91142"	"1419.91383"	"-1.69"	"-0.00120"	"6/62"	"6"	"62"	"373294.010986328"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"27.2667"	"5651"	"5651"	"5636"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.9"	""	"49.0"	""	"47.6"	""	"59.7"	"0.4"	"74.2"	"57.4"	""	"208"	"21"	"30.000"	"23.000"	"0.0788920678030351"	"17"	"0.000523"	"0.003194"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLDSAAK"	"[K].kLDSAAk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.45935"	"1419.91142"	"1419.91383"	"-1.69"	"-0.00120"	"6/62"	"6"	"62"	"380540.903686523"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"27.1876"	"5584"	"5584"	"5566"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.7"	""	"39.9"	""	"43.1"	""	"76.9"	"0.1"	"69.5"	"66.2"	""	"208"	"17"	"30.000"	"23.000"	"0.200001539806656"	"14"	"0.0003839"	"0.00195"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAFDYATK"	"[K].fAFDYATk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"710.89685"	"1420.78642"	"1420.78767"	"-0.88"	"-0.00062"	"12/62"	"12"	"62"	"2594234.32287598"	"HCD"	"MS2"	"15.69208"	"238.4"	"100.000"	"51.0028"	"15298"	"15298"	"15270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"363.6"	""	"349.6"	""	"355.5"	""	"352.1"	"0.1"	"407.4"	"427.2"	""	"1016"	"37"	"37.000"	"30.000"	"0.0101126205620549"	"22"	"0.0001889"	"0.0005442"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAQWVGFITR"	"[K].nAQWVGFITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"710.89880"	"1420.79033"	"1420.78985"	"0.34"	"0.00024"	"8/90"	"8"	"90"	"2713552.13751221"	"HCD"	"MS2"	"34.02538"	"173.7"	"100.000"	"52.2824"	"15771"	"15771"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.3"	""	"253.0"	""	"251.6"	""	"292.8"	""	"295.3"	"322.1"	""	"1049"	"41"	"37.000"	"30.000"	"0.00453675673397851"	"21"	"0"	"6.462E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAQWVGFITR"	"[K].nAQWVGFITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"710.89893"	"1420.79057"	"1420.78985"	"0.51"	"0.00036"	"8/90"	"8"	"90"	"2786622.51135254"	"HCD"	"MS2"	"42.73917"	"191.9"	"100.000"	"52.4875"	"15905"	"15905"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"256.4"	""	"272.9"	""	"269.7"	""	"321.9"	"0.9"	"348.3"	"347.6"	""	"1049"	"51"	"37.000"	"30.000"	"0.000379092761989339"	"21"	"0"	"6.607E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFYEHAPK"	"[R].aFYEHAPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.27063"	"1420.79734"	"1420.79891"	"-1.11"	"-0.00052"	"6/56"	"6"	"56"	"7738786.01226807"	"HCD"	"MS2"	"16.70018"	"350.3"	"76.620"	"30.6469"	"6997"	"6997"	"6976"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"556.0"	""	"483.8"	""	"454.8"	""	"557.8"	""	"643.1"	"625.5"	""	"1007"	"26"	"37.000"	"30.000"	"0.114551155639374"	"14"	"0.0003146"	"0.001406"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFYEHAPK"	"[R].aFYEHAPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.27090"	"1420.79816"	"1420.79891"	"-0.53"	"-0.00025"	"8/56"	"8"	"56"	"6939872.28442383"	"HCD"	"MS2"	"18.55819"	"425.2"	"100.000"	"30.5756"	"6927"	"6927"	"6904"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"647.7"	""	"556.2"	""	"549.4"	""	"718.5"	"1.8"	"801.9"	"752.3"	""	"1013"	"21"	"37.000"	"30.000"	"0.432095207749909"	"14"	"0.0003839"	"0.001781"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].lSILYPATTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"710.91150"	"1420.81572"	"1420.83613"	"-14.36"	"-0.01020"	"7/94"	"7"	"94"	"1963871.59716797"	"HCD"	"MS2"	"0"	"116.1"	"100.000"	"52.6802"	"15934"	"15934"	"15906"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.1"	""	"154.5"	""	"184.1"	""	"161.8"	"4.1"	"188.2"	"211.1"	""	"977"	"13"	"36.000"	"29.000"	"2.31667209799629"	"18"	"0.009019"	"0.4042"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].lSILYPATTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"474.28326"	"1420.83524"	"1420.83613"	"-0.63"	"-0.00030"	"10/94"	"10"	"94"	"6394232.07971191"	"HCD"	"MS2"	"37.42622"	"107.5"	"100.000"	"51.1983"	"15328"	"15328"	"15298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.9"	""	"138.3"	""	"133.8"	""	"200.4"	""	"204.7"	"216.0"	""	"822"	"36"	"36.000"	"29.000"	"0.0110367656716565"	"22"	"0.0001889"	"0.000492"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].lSILYPATTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"474.28333"	"1420.83542"	"1420.83613"	"-0.50"	"-0.00024"	"12/94"	"12"	"94"	"2919800.10003662"	"HCD"	"MS2"	"44.26996"	"69.2"	"100.000"	"51.5139"	"15457"	"15457"	"15426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.9"	""	"75.6"	""	"97.5"	""	"121.7"	"4.1"	"136.2"	"131.2"	""	"820"	"28"	"36.000"	"29.000"	"0.0583154802720357"	"20"	"0.0001859"	"0.0003445"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].lSILYPATTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"710.92139"	"1420.83550"	"1420.83613"	"-0.45"	"-0.00032"	"10/94"	"10"	"94"	"15560844.9192505"	"HCD"	"MS2"	"42.45216"	"803.8"	"100.000"	"51.0602"	"15271"	"15271"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1193.0"	""	"1107.0"	""	"1123.5"	""	"1327.8"	"1.6"	"1335.6"	"1519.9"	""	"816"	"38"	"36.000"	"29.000"	"0.0067867236135103"	"24"	"0"	"9.118E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].lSILYPATTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"474.28339"	"1420.83561"	"1420.83613"	"-0.37"	"-0.00018"	"11/94"	"11"	"94"	"7034286.45825195"	"HCD"	"MS2"	"26.39063"	"94.4"	"100.000"	"51.4306"	"15473"	"15473"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.7"	""	"114.5"	""	"121.7"	""	"173.6"	"0.4"	"194.7"	"191.0"	""	"806"	"39"	"36.000"	"29.000"	"0.004648416629019"	"20"	"0.0001308"	"0.0002666"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].lSILYPATTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"710.92163"	"1420.83599"	"1420.83613"	"-0.10"	"-0.00007"	"10/94"	"10"	"94"	"5897643.30804443"	"HCD"	"MS2"	"1.518267"	"258.7"	"100.000"	"51.8795"	"15656"	"15656"	"15638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"328.7"	""	"333.0"	""	"385.2"	""	"429.6"	"0.4"	"459.5"	"515.5"	""	"806"	"41"	"36.000"	"29.000"	"0.00307825820781809"	"24"	"0"	"0.0001139"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].lSILYPATTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"710.92169"	"1420.83611"	"1420.83613"	"-0.02"	"-0.00001"	"10/94"	"10"	"94"	"18322827.5204468"	"HCD"	"MS2"	"35.83894"	"845.0"	"100.000"	"51.2626"	"15404"	"15404"	"15382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1234.3"	""	"1198.7"	""	"1244.3"	""	"1376.9"	"0.6"	"1400.1"	"1541.4"	""	"810"	"37"	"36.000"	"29.000"	"0.00863883189824363"	"25"	"0"	"6.307E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].lSILYPATTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"710.92194"	"1420.83660"	"1420.83613"	"0.33"	"0.00023"	"10/94"	"10"	"94"	"106654189.503906"	"HCD"	"MS2"	"1.078164"	"311.7"	"8.140"	"51.5618"	"15527"	"15527"	"15510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"416.5"	""	"403.4"	""	"457.3"	""	"521.6"	"2.1"	"522.7"	"628.9"	""	"810"	"47"	"36.000"	"29.000"	"0.000867870693453624"	"26"	"7.476E-05"	"0.0001895"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].lSILYPATTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"710.92212"	"1420.83696"	"1420.83613"	"0.58"	"0.00042"	"10/94"	"10"	"94"	"103399636.540527"	"HCD"	"MS2"	"1.202083"	"375.3"	"9.882"	"51.3618"	"15395"	"15395"	"15378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"478.2"	""	"490.8"	""	"528.0"	""	"659.9"	"0.0"	"643.9"	"755.1"	""	"809"	"48"	"36.000"	"29.000"	"0.000656022184381687"	"25"	"0.0001859"	"0.000362"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].lSILYPATTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"710.92249"	"1420.83769"	"1420.83613"	"1.10"	"0.00078"	"9/94"	"9"	"94"	"6511307.85766602"	"HCD"	"MS2"	"1.342239"	"271.4"	"100.000"	"51.6749"	"15523"	"15523"	"15506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.3"	""	"346.1"	""	"380.4"	""	"469.5"	"2.8"	"477.1"	"545.1"	""	"811"	"35"	"36.000"	"29.000"	"0.0114548882982832"	"24"	"0"	"0.0001703"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEIFLK"	"[R].eAIEIFLk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"710.94397"	"1420.88066"	"1420.88157"	"-0.64"	"-0.00046"	"14/62"	"14"	"62"	"3030426.5791626"	"HCD"	"MS2"	"12.46675"	"235.2"	"100.000"	"65.2807"	"21109"	"21109"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.3"	""	"393.9"	""	"384.6"	""	"351.4"	"1.1"	"353.4"	"382.1"	""	"426"	"46"	"33.000"	"26.000"	"0.000525266378830915"	""	"0.0001889"	"0.0003834"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEIFLK"	"[R].eAIEIFLk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"3"	"3"	"0.5500"	"0.0000"	"1"	"1"	"1"	"474.29868"	"1420.88147"	"1420.88157"	"-0.07"	"-0.00003"	"8/62"	"8"	"62"	"444847.825561523"	"HCD"	"MS2"	"9.506488"	"22.1"	"100.000"	"65.4524"	"21127"	"21127"	"21097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.9"	""	"34.9"	""	"31.3"	""	"34.4"	""	"34.8"	"47.0"	""	"388"	"20"	"32.000"	"25.000"	"0.206443745535517"	"23"	"0.0006737"	"0.006554"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEIFLK"	"[R].eAIEIFLk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"710.94446"	"1420.88164"	"1420.88157"	"0.05"	"0.00003"	"14/62"	"14"	"62"	"2666585.15118408"	"HCD"	"MS2"	"11.13835"	"211.5"	"100.000"	"65.3071"	"21067"	"21067"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.9"	""	"357.4"	""	"338.1"	""	"324.2"	""	"312.1"	"331.4"	""	"385"	"46"	"32.000"	"25.000"	"0.00047910503376936"	""	"0.0001308"	"0.0002974"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIFQAIAAK"	"[K].tIFQAIAAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.30206"	"1420.89164"	"1420.89281"	"-0.82"	"-0.00039"	"9/74"	"9"	"74"	"7888600.57995605"	"HCD"	"MS2"	"26.92442"	"261.0"	"100.000"	"56.5901"	"17565"	"17565"	"17541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"370.1"	""	"341.5"	""	"391.8"	""	"450.2"	"2.2"	"444.4"	"470.7"	""	"316"	"29"	"31.000"	"24.000"	"0.0189520889897602"	"14"	"0.0002723"	"0.001377"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIFQAIAAK"	"[K].tIFQAIAAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.9492"	"0.0000"	"1"	"1"	"1"	"710.94971"	"1420.89214"	"1420.89281"	"-0.47"	"-0.00033"	"16/74"	"16"	"74"	"10770938.1171875"	"HCD"	"MS2"	"8.758817"	"640.4"	"100.000"	"56.5717"	"17558"	"17558"	"17541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"986.1"	""	"827.7"	""	"966.5"	""	"1120.3"	"3.0"	"1026.4"	"1126.7"	""	"310"	"59"	"31.000"	"24.000"	"1.92456107676824E-05"	"19"	"0.0001308"	"0.0002414"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIFQAIAAK"	"[K].tIFQAIAAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.30249"	"1420.89292"	"1420.89281"	"0.08"	"0.00004"	"10/74"	"10"	"74"	"7790727.37054443"	"HCD"	"MS2"	"22.54431"	"256.5"	"100.000"	"56.3917"	"17430"	"17430"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.3"	"2.3"	"315.2"	""	"366.2"	""	"454.8"	""	"434.0"	"495.7"	""	"305"	"31"	"31.000"	"24.000"	"0.011201336489396"	"14"	"0.0001889"	"0.0005182"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIFQAIAAK"	"[K].tIFQAIAAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"710.95050"	"1420.89372"	"1420.89281"	"0.65"	"0.00046"	"16/74"	"16"	"74"	"10517954.3265991"	"HCD"	"MS2"	"9.555698"	"610.7"	"100.000"	"56.3663"	"17420"	"17420"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"917.8"	""	"788.1"	""	"902.7"	""	"1070.4"	"5.8"	"997.5"	"1095.9"	""	"302"	"61"	"31.000"	"24.000"	"1.11423538749494E-05"	"22"	"0.0001859"	"0.0003575"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLLQQNGIR"	"[R].tFLLqqnGIR.[H]"	"N-Term(TMT6plex); Q5(Deamidated); Q6(Deamidated); N7(Deamidated)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"474.59546"	"1421.77182"	"1421.78376"	"-8.40"	"-0.00398"	"4/82"	"4"	"82"	"8026362.26165771"	"HCD"	"MS2"	"17.5834"	"155.0"	"68.646"	"37.9147"	"9965"	"9965"	"9937"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"201.5"	"3.2"	"198.5"	""	"223.0"	""	"252.1"	""	"299.8"	"293.3"	""	"970"	"23"	"36.000"	"29.000"	"0.243075808309227"	"15"	"0.001966"	"0.02889"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLLQQNGIR"	"[R].tFLLqqnGIR.[H]"	"N-Term(TMT6plex); Q5(Deamidated); Q6(Deamidated); N7(Deamidated)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"474.59583"	"1421.77292"	"1421.78376"	"-7.62"	"-0.00361"	"4/82"	"4"	"82"	"7954315.83959961"	"HCD"	"MS2"	"21.48028"	"187.9"	"92.318"	"37.8031"	"9876"	"9876"	"9848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"241.8"	""	"237.2"	""	"267.2"	""	"311.1"	"1.9"	"377.0"	"345.4"	""	"947"	"21"	"36.000"	"29.000"	"0.366707661259492"	"16"	"0.001422"	"0.01945"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.39648"	"1421.78569"	"1421.78629"	"-0.42"	"-0.00030"	"5/60"	"5"	"60"	"366671.585266113"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"31.2893"	"7217"	"7217"	"7190"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.8"	""	"32.1"	""	"34.2"	""	"35.5"	""	"52.2"	"44.9"	""	"905"	"25"	"36.000"	"29.000"	"0.13983586832124"	"14"	"0.002265"	"0.03305"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"711.39655"	"1421.78581"	"1421.78629"	"-0.34"	"-0.00024"	"7/60"	"7"	"60"	"289736.312011719"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"30.9514"	"7079"	"7079"	"7048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.8"	""	"25.3"	""	"29.6"	""	"24.3"	""	"40.4"	"39.6"	""	"904"	"34"	"36.000"	"29.000"	"0.0182028099515107"	"18"	"0.0008453"	"0.008001"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"711.39703"	"1421.78679"	"1421.78629"	"0.35"	"0.00025"	"6/60"	"6"	"60"	"318975.849914551"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"31.4082"	"7308"	"7308"	"7280"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.5"	""	"35.7"	""	"39.4"	""	"36.8"	""	"40.5"	"44.1"	""	"903"	"23"	"36.000"	"29.000"	"0.217599430627745"	"16"	"0.00274"	"0.04317"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEVGDIMLIR"	"[K].fEVGDIMLIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"711.40369"	"1421.80010"	"1421.80239"	"-1.61"	"-0.00115"	"8/78"	"8"	"78"	"12412056.171814"	"HCD"	"MS2"	"18.58128"	"531.6"	"87.261"	"72.6616"	"24113"	"24113"	"24095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"719.3"	""	"924.0"	""	"940.8"	""	"547.2"	"0.0"	"921.6"	"978.6"	""	"899"	"52"	"36.000"	"29.000"	"0.000286899437042651"	"25"	"0"	"0.000172"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEVGDIMLIR"	"[K].fEVGDIMLIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"711.40448"	"1421.80168"	"1421.80239"	"-0.50"	"-0.00035"	"7/78"	"7"	"78"	"2255865.35534668"	"HCD"	"MS2"	"15.52332"	"131.9"	"100.000"	"72.9704"	"24240"	"24240"	"24223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.1"	""	"208.0"	""	"205.7"	""	"157.6"	""	"235.9"	"265.6"	""	"895"	"42"	"36.000"	"29.000"	"0.00276562339061941"	""	"0"	"5.69E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEVGDIMLIR"	"[K].fEVGDIMLIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"711.40454"	"1421.80181"	"1421.80239"	"-0.41"	"-0.00029"	"7/78"	"7"	"78"	"1833607.83215332"	"HCD"	"MS2"	"19.04039"	"110.0"	"100.000"	"73.0231"	"24210"	"24210"	"24193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.2"	""	"169.9"	""	"179.6"	""	"128.4"	""	"200.4"	"213.0"	""	"895"	"42"	"36.000"	"29.000"	"0.00284965995606292"	"28"	"0"	"3.875E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEVGDIMLIR"	"[K].fEVGDIMLIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"711.40454"	"1421.80181"	"1421.80239"	"-0.41"	"-0.00029"	"15/78"	"15"	"78"	"13942625.3513794"	"HCD"	"MS2"	"17.42923"	"421.1"	"59.198"	"72.7140"	"24083"	"24083"	"24065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"554.4"	""	"709.3"	""	"756.8"	""	"446.1"	""	"723.5"	"800.2"	""	"895"	"44"	"36.000"	"29.000"	"0.0018314414522918"	"24"	"0"	"0.0001625"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QINWTVLYR"	"[R].qINWTVLYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.40729"	"1421.80730"	"1421.81025"	"-2.08"	"-0.00148"	"6/80"	"6"	"80"	"5069791.64038086"	"HCD"	"MS2"	"37.33724"	"285.6"	"100.000"	"57.6123"	"17929"	"17929"	"17899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"420.9"	""	"469.4"	""	"472.6"	""	"451.1"	""	"473.5"	"413.9"	""	"905"	"38"	"36.000"	"29.000"	"0.00666221407350805"	"15"	"0.0001859"	"0.0003674"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QINWTVLYR"	"[R].qINWTVLYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.40796"	"1421.80864"	"1421.81025"	"-1.13"	"-0.00080"	"6/80"	"6"	"80"	"5526869.95941162"	"HCD"	"MS2"	"29.22599"	"295.7"	"100.000"	"57.7998"	"18059"	"18059"	"18037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"435.7"	""	"495.1"	""	"515.0"	""	"467.9"	"5.4"	"465.3"	"408.8"	""	"924"	"36"	"36.000"	"29.000"	"0.0115782247490084"	"15"	"0.0001889"	"0.0003784"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QINWTVLYR"	"[R].qINWTVLYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.40930"	"1421.81133"	"1421.81025"	"0.76"	"0.00054"	"8/80"	"8"	"80"	"1348142.34240723"	"HCD"	"MS2"	"29.03333"	"109.9"	"100.000"	"57.9209"	"18055"	"18055"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.4"	""	"154.8"	""	"171.6"	""	"189.0"	"0.2"	"197.7"	"179.5"	""	"890"	"13"	"36.000"	"29.000"	"1.99232420358481"	"13"	"0.0001308"	"0.0002964"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNFLLEK"	"[K].iSNFLLEk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"711.44147"	"1421.87566"	"1421.87682"	"-0.82"	"-0.00058"	"14/76"	"14"	"76"	"2670222.87841797"	"HCD"	"MS2"	"18.09028"	"210.2"	"100.000"	"60.6269"	"19209"	"19209"	"19187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"328.6"	""	"280.5"	""	"309.3"	""	"312.5"	"0.1"	"362.8"	"395.7"	""	"390"	"42"	"32.000"	"25.000"	"0.00111952710130429"	"23"	"0.0001889"	"0.0006729"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILIDFTK"	"[R].nILIDFTk.[KR]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708; P27881"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4; Hexokinase-2 OS=Rattus norvegicus OX=10116 GN=Hk2 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"711.44177"	"1421.87627"	"1421.87682"	"-0.39"	"-0.00028"	"12/74"	"12"	"74"	"3369086.51287842"	"HCD"	"MS2"	"15.71388"	"250.7"	"100.000"	"61.9779"	"19707"	"19707"	"19689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"380.4"	""	"338.0"	""	"370.3"	""	"374.9"	"4.1"	"432.9"	"472.6"	""	"385"	"38"	"32.000"	"25.000"	"0.00294056466210829"	"21"	"0.0001889"	"0.0005229"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNFLLEK"	"[K].iSNFLLEk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"711.44189"	"1421.87651"	"1421.87682"	"-0.22"	"-0.00016"	"14/76"	"14"	"76"	"2637751.82958984"	"HCD"	"MS2"	"9.449364"	"234.9"	"100.000"	"60.5004"	"19104"	"19104"	"19081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"338.7"	""	"306.4"	""	"339.2"	""	"355.0"	"0.8"	"433.3"	"452.1"	""	"385"	"44"	"32.000"	"25.000"	"0.000764593732728672"	"24"	"0.0001889"	"0.0008334"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYGLASVK"	"[K].lLYGLASVk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"711.45776"	"1421.90825"	"1421.91321"	"-3.49"	"-0.00248"	"14/64"	"14"	"64"	"3630274.20623779"	"HCD"	"MS2"	"41.22802"	"230.3"	"100.000"	"60.8277"	"19291"	"19291"	"19267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.6"	""	"295.4"	""	"303.3"	""	"424.5"	""	"428.3"	"441.3"	""	"163"	"26"	"29.000"	"22.000"	"0.022446963932206"	""	"0.0001889"	"0.0009936"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYGLASVK"	"[K].lLYGLASVk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"711.45831"	"1421.90935"	"1421.91321"	"-2.71"	"-0.00193"	"8/64"	"8"	"64"	"3498535.60595703"	"HCD"	"MS2"	"29.33343"	"229.2"	"100.000"	"60.6870"	"19180"	"19180"	"19161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"289.8"	""	"278.8"	""	"318.3"	""	"408.2"	""	"414.1"	"465.0"	""	"149"	"25"	"28.000"	"21.000"	"0.024330793496839"	""	"0.0001859"	"0.0003416"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYGLASVK"	"[K].lLYGLASVk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"3"	"3"	"0.6061"	"0.0000"	"1"	"1"	"1"	"474.64139"	"1421.90961"	"1421.91321"	"-2.53"	"-0.00120"	"7/64"	"7"	"64"	"2739016.27697754"	"HCD"	"MS2"	"7.230756"	"79.0"	"100.000"	"60.7886"	"19222"	"19222"	"19193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.2"	""	"88.0"	""	"107.4"	""	"141.4"	""	"146.4"	"182.6"	""	"149"	"33"	"28.000"	"21.000"	"0.00382962520428907"	""	"0.0001859"	"0.0003417"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYGLASVK"	"[K].lLYGLASVk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"3"	"3"	"0.5357"	"0.0000"	"1"	"1"	"1"	"474.64160"	"1421.91025"	"1421.91321"	"-2.08"	"-0.00099"	"7/64"	"7"	"64"	"3060330.45489502"	"HCD"	"MS2"	"23.38381"	"80.0"	"100.000"	"60.8783"	"19312"	"19312"	"19283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.3"	""	"98.3"	""	"95.7"	""	"150.2"	""	"157.2"	"171.7"	""	"149"	"28"	"28.000"	"21.000"	"0.012798417484324"	""	"0.0001889"	"0.0005088"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIINSLYK"	"[K].lIINSLYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"711.45929"	"1421.91130"	"1421.91321"	"-1.34"	"-0.00095"	"7/64"	"7"	"64"	"3541512.98242188"	"HCD"	"MS2"	"12.85247"	"261.1"	"100.000"	"57.6364"	"17992"	"17992"	"17973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.5"	""	"366.7"	""	"412.2"	""	"413.3"	"2.6"	"427.1"	"449.6"	""	"149"	"44"	"28.000"	"21.000"	"0.000332779276152467"	""	"0.0001889"	"0.0008135"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIINSLYK"	"[K].lIINSLYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"711.45929"	"1421.91130"	"1421.91321"	"-1.34"	"-0.00095"	"7/64"	"7"	"64"	"18173248.8707275"	"HCD"	"MS2"	"19.47115"	"790.6"	"66.521"	"57.3204"	"17863"	"17863"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1197.1"	""	"1049.2"	""	"1213.1"	""	"1465.4"	"10.8"	"1270.4"	"1268.5"	""	"149"	"44"	"28.000"	"21.000"	"0.000279998866194891"	""	"0.0005564"	"0.003416"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIINSLYK"	"[K].lIINSLYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"474.64197"	"1421.91135"	"1421.91321"	"-1.31"	"-0.00062"	"8/64"	"8"	"64"	"9068792.99163818"	"HCD"	"MS2"	"22.46684"	"292.5"	"100.000"	"57.3481"	"17875"	"17875"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"430.4"	""	"411.4"	""	"446.2"	""	"520.4"	"1.8"	"493.0"	"463.7"	""	"149"	"28"	"28.000"	"21.000"	"0.0129168397832683"	"21"	"0.0001889"	"0.001015"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIINSLYK"	"[K].lIINSLYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"711.45978"	"1421.91228"	"1421.91321"	"-0.65"	"-0.00046"	"7/64"	"7"	"64"	"3601585.31921387"	"HCD"	"MS2"	"21.62955"	"268.0"	"100.000"	"57.4331"	"17855"	"17855"	"17835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"407.1"	""	"378.4"	""	"416.0"	""	"432.0"	"3.3"	"436.0"	"462.2"	""	"143"	"44"	"28.000"	"21.000"	"0.000311390989685182"	""	"0.0001889"	"0.000517"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIINSLYK"	"[K].lIINSLYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"474.64261"	"1421.91327"	"1421.91321"	"0.05"	"0.00002"	"9/64"	"9"	"64"	"7596653.01312256"	"HCD"	"MS2"	"28.75531"	"253.0"	"100.000"	"57.1331"	"17733"	"17733"	"17707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"367.3"	""	"340.5"	""	"376.2"	""	"458.8"	""	"432.2"	"420.5"	""	"139"	"32"	"28.000"	"21.000"	"0.00421681749064011"	""	"0.0001889"	"0.001077"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIINSLYK"	"[K].lIINSLYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"711.46063"	"1421.91399"	"1421.91321"	"0.55"	"0.00039"	"7/64"	"7"	"64"	"15596943.916626"	"HCD"	"MS2"	"20.92432"	"1006.0"	"100.000"	"57.1145"	"17725"	"17725"	"17707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1549.6"	""	"1326.1"	""	"1522.2"	""	"1839.3"	"0.2"	"1609.5"	"1665.0"	""	"137"	"44"	"28.000"	"21.000"	"0.000265883000703594"	""	"0.0003839"	"0.001814"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLFEHYTR"	"[R].mPLFEHYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"474.91772"	"1422.73862"	"1422.74012"	"-1.06"	"-0.00050"	"7/70"	"7"	"70"	"11408089.9109497"	"HCD"	"MS2"	"30.52811"	"188.3"	"100.000"	"39.5833"	"10650"	"10650"	"10622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"243.4"	""	"251.4"	""	"265.3"	""	"281.3"	""	"375.2"	"370.8"	""	"819"	"36"	"36.000"	"29.000"	"0.0105987318875519"	"22"	"0"	"0.0001377"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLFEHYTR"	"[R].mPLFEHYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"474.91797"	"1422.73935"	"1422.74012"	"-0.54"	"-0.00026"	"7/70"	"7"	"70"	"12436973.1566162"	"HCD"	"MS2"	"20.51477"	"185.4"	"100.000"	"39.5014"	"10573"	"10573"	"10550"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"260.0"	""	"234.6"	""	"237.7"	""	"261.9"	"3.2"	"371.8"	"390.2"	""	"845"	"38"	"36.000"	"29.000"	"0.00598172872031866"	"24"	"0"	"7.832E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYDISNPK"	"[R].qYDISNPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"711.90057"	"1422.79387"	"1422.79930"	"-3.82"	"-0.00271"	"6/74"	"6"	"74"	"351121.940307617"	"HCD"	"MS2"	"0"	"35.1"	"100.000"	"33.6417"	"8173"	"8173"	"8147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.7"	""	"37.1"	""	"54.4"	""	"57.3"	"1.1"	"64.3"	"62.4"	""	"919"	"39"	"36.000"	"29.000"	"0.00567917845667753"	"22"	"0.0001889"	"0.0004827"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"711.90265"	"1422.79802"	"1422.79930"	"-0.90"	"-0.00064"	"9/80"	"9"	"80"	"2980988.41394043"	"HCD"	"MS2"	"18.37895"	"279.7"	"100.000"	"38.3145"	"10086"	"10086"	"10055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"469.3"	""	"342.1"	""	"367.6"	""	"460.7"	""	"497.3"	"512.6"	""	"892"	"35"	"36.000"	"29.000"	"0.0142670721892236"	"21"	"0"	"5.447E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYDISNPK"	"[R].qYDISNPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"711.90344"	"1422.79961"	"1422.79930"	"0.22"	"0.00015"	"6/74"	"6"	"74"	"306252.023925781"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"33.6899"	"8236"	"8236"	"8210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.0"	""	"32.0"	""	"41.0"	""	"52.0"	""	"56.2"	"60.2"	""	"905"	"30"	"36.000"	"29.000"	"0.0414589771780205"	"22"	"0.0001889"	"0.0005893"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLTFNPNK"	"[R].mLTFNPNk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"711.91223"	"1422.81719"	"1422.81793"	"-0.52"	"-0.00037"	"12/62"	"12"	"62"	"2350425.40594482"	"HCD"	"MS2"	"0"	"204.0"	"100.000"	"44.6257"	"12653"	"12653"	"12630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"282.7"	""	"258.3"	""	"282.9"	""	"267.6"	""	"418.3"	"428.3"	""	"766"	"34"	"35.000"	"28.000"	"0.015710817144387"	"23"	"0.0001889"	"0.0005309"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLTFNPNK"	"[R].mLTFNPNk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"474.94409"	"1422.81772"	"1422.81793"	"-0.14"	"-0.00007"	"8/62"	"8"	"62"	"2912847.40948486"	"HCD"	"MS2"	"0"	"113.2"	"100.000"	"44.6715"	"12672"	"12672"	"12646"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.0"	""	"148.9"	""	"178.3"	""	"153.9"	"4.5"	"219.1"	"230.1"	""	"759"	"20"	"35.000"	"28.000"	"0.346108113535568"	"15"	"0.000523"	"0.003042"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLTFNPNK"	"[R].mLTFNPNk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"711.91321"	"1422.81914"	"1422.81793"	"0.85"	"0.00061"	"7/62"	"7"	"62"	"2300868.36895752"	"HCD"	"MS2"	"8.457864"	"205.3"	"100.000"	"44.8758"	"12804"	"12804"	"12784"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.4"	""	"262.0"	""	"282.8"	""	"279.4"	"2.2"	"438.2"	"410.2"	""	"747"	"32"	"35.000"	"28.000"	"0.021691550994421"	"23"	"0.0001889"	"0.0005035"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPFTFPVK"	"[K].ePFTFPVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"711.92261"	"1422.83794"	"1422.83971"	"-1.24"	"-0.00089"	"7/62"	"7"	"62"	"4002981.43817139"	"HCD"	"MS2"	"0"	"292.5"	"100.000"	"55.3772"	"17069"	"17069"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"365.1"	""	"361.0"	""	"393.4"	""	"516.6"	"3.5"	"571.2"	"563.6"	""	"632"	"32"	"34.000"	"28.000"	"0.021962768435806"	"21"	"0.0003839"	"0.001697"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSQFQK"	"[R].lTLSQFQk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"711.93884"	"1422.87041"	"1422.87207"	"-1.17"	"-0.00083"	"14/66"	"14"	"66"	"1708987.22247314"	"HCD"	"MS2"	"41.66095"	"161.0"	"100.000"	"48.3440"	"14170"	"14170"	"14144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.3"	""	"188.0"	""	"219.8"	""	"249.3"	""	"316.9"	"344.2"	""	"384"	"43"	"32.000"	"25.000"	"0.000875590878626489"	"20"	"0.0001889"	"0.0005929"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELSVLYK"	"[R].lELSVLYk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"711.95203"	"1422.89678"	"1422.89722"	"-0.31"	"-0.00022"	"7/60"	"7"	"60"	"4210173.83813477"	"HCD"	"MS2"	"7.135413"	"303.4"	"100.000"	"62.3954"	"19931"	"19931"	"19907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"455.3"	""	"480.0"	""	"497.6"	""	"452.5"	""	"484.8"	"499.7"	""	"236"	"45"	"30.000"	"23.000"	"0.000390734723349458"	""	"0.0001889"	"0.00062"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIINSLYK"	"[K].lIInSLYk.[N]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"711.95221"	"1422.89714"	"1422.89722"	"-0.06"	"-0.00004"	"14/64"	"14"	"64"	"2118056.98590088"	"HCD"	"MS2"	"4.650723"	"167.7"	"100.000"	"62.6951"	"20053"	"20053"	"20035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.8"	""	"228.8"	""	"234.0"	""	"262.5"	"1.1"	"312.7"	"293.7"	""	"236"	"45"	"30.000"	"23.000"	"0.000349045471053083"	""	"0.0001889"	"0.0004056"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELSVLYK"	"[R].lELSVLYk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"711.95264"	"1422.89800"	"1422.89722"	"0.54"	"0.00039"	"7/60"	"7"	"60"	"4002461.05047607"	"HCD"	"MS2"	"8.171577"	"294.1"	"100.000"	"62.2633"	"19824"	"19824"	"19801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.0"	""	"468.0"	""	"492.8"	""	"408.2"	"0.6"	"473.7"	"503.4"	""	"235"	"45"	"30.000"	"23.000"	"0.000397226182542028"	""	"0.0001889"	"0.0006032"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIINSLYK"	"[K].lIInSLYk.[N]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"474.97086"	"1422.89801"	"1422.89722"	"0.56"	"0.00026"	"5/64"	"5"	"64"	"826090.007324219"	"HCD"	"MS2"	"31.71577"	"36.7"	"100.000"	"62.5145"	"19927"	"19927"	"19897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.4"	""	"52.9"	""	"53.5"	""	"55.4"	""	"70.7"	"71.6"	""	"235"	"26"	"30.000"	"23.000"	"0.0326616308961716"	""	"0.0004166"	"0.002488"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIINSLYK"	"[K].lIInSLYk.[N]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"711.95270"	"1422.89812"	"1422.89722"	"0.63"	"0.00045"	"14/64"	"14"	"64"	"2098310.05548096"	"HCD"	"MS2"	"12.09569"	"165.4"	"100.000"	"62.5702"	"19949"	"19949"	"19929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.5"	""	"226.7"	""	"250.3"	""	"247.8"	""	"289.6"	"303.0"	""	"235"	"45"	"30.000"	"23.000"	"0.000342797674145137"	""	"0.0001889"	"0.0004235"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDFNVPMK"	"[R].vDFNVPmk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"475.27155"	"1423.80008"	"1423.80194"	"-1.31"	"-0.00062"	"7/64"	"7"	"64"	"5002461.92059326"	"HCD"	"MS2"	"27.9954"	"172.9"	"100.000"	"43.7838"	"12310"	"12310"	"12290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.6"	""	"236.1"	""	"264.9"	""	"325.6"	"1.4"	"284.1"	"278.4"	""	"803"	"17"	"36.000"	"29.000"	"0.739069958589786"	"15"	"0.002829"	"0.04559"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDFNVPMK"	"[R].vDFNVPmk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"475.27176"	"1423.80072"	"1423.80194"	"-0.86"	"-0.00041"	"7/64"	"7"	"64"	"5075389.3616333"	"HCD"	"MS2"	"33.84833"	"170.8"	"100.000"	"44.0201"	"12456"	"12456"	"12431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"243.2"	""	"231.8"	""	"263.3"	""	"325.3"	"2.1"	"270.2"	"278.8"	""	"799"	"16"	"36.000"	"29.000"	"0.96054293860277"	"15"	"0.005698"	"0.1836"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTASNQFK"	"[R].gLTASNQFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"712.42035"	"1423.83342"	"1423.83094"	"1.75"	"0.00124"	"7/74"	"7"	"74"	"515051.263183594"	"HCD"	"MS2"	"0"	"55.7"	"100.000"	"35.5908"	"8968"	"8968"	"8939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.1"	""	"74.9"	""	"74.6"	""	"93.3"	""	"116.6"	"101.3"	""	"625"	"37"	"34.000"	"27.000"	"0.00627841503940228"	"21"	"0"	"9.389E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDSLTTLYLR"	"[R].lDSLTTLYLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYI5"	"Leucine-rich repeat protein SHOC-2 OS=Rattus norvegicus OX=10116 GN=Shoc2 PE=2 SV=1"	"Q6AYI5"	"Leucine-rich repeat protein SHOC-2 OS=Rattus norvegicus OX=10116 GN=Shoc2 PE=2 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"712.42279"	"1423.83830"	"1423.83580"	"1.76"	"0.00125"	"8/80"	"8"	"80"	"2570660.39855957"	"HCD"	"MS2"	"0"	"93.6"	"100.000"	"66.6538"	"21617"	"21617"	"21593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.8"	""	"92.6"	""	"73.7"	""	"101.5"	""	"456.7"	"109.0"	""	"590"	"13"	"34.000"	"27.000"	"1.39579621393637"	"20"	"0.0007793"	"0.007249"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLTSFIEK"	"[R].qLTSFIEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"712.43103"	"1423.85478"	"1423.85609"	"-0.92"	"-0.00065"	"14/78"	"14"	"78"	"8545932.38879395"	"HCD"	"MS2"	"45.27367"	"641.0"	"100.000"	"49.1640"	"14553"	"14553"	"14527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1101.1"	""	"851.5"	""	"854.4"	""	"1200.3"	"0.6"	"988.5"	"1061.4"	""	"484"	"43"	"33.000"	"26.000"	"0.00118253870960966"	"21"	"0.0001889"	"0.0007632"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLTSFIEK"	"[R].qLTSFIEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"712.43109"	"1423.85491"	"1423.85609"	"-0.83"	"-0.00059"	"14/78"	"14"	"78"	"8501403.36431885"	"HCD"	"MS2"	"41.10076"	"674.5"	"100.000"	"48.8819"	"14390"	"14390"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1140.6"	""	"893.8"	""	"882.7"	""	"1258.6"	""	"1071.6"	"1134.1"	""	"484"	"47"	"33.000"	"26.000"	"0.000492964182804784"	"24"	"0.0001889"	"0.0006425"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLTSFIEK"	"[R].qLTSFIEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"475.29004"	"1423.85556"	"1423.85609"	"-0.37"	"-0.00017"	"6/78"	"6"	"78"	"7769911.17340088"	"HCD"	"MS2"	"6.554767"	"254.7"	"100.000"	"48.9716"	"14427"	"14427"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"407.4"	""	"312.7"	""	"344.5"	""	"495.3"	"3.1"	"416.5"	"429.2"	""	"474"	"36"	"33.000"	"26.000"	"0.00602210531215185"	"18"	"0.0002277"	"0.001331"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVNELIYK"	"[K].sVNELIYk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"712.43152"	"1423.85576"	"1423.85609"	"-0.23"	"-0.00016"	"14/72"	"14"	"72"	"12397819.5876465"	"HCD"	"MS2"	"21.78405"	"929.6"	"100.000"	"44.3925"	"12608"	"12608"	"12588"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1357.3"	""	"1249.4"	""	"1398.3"	""	"1487.0"	"2.1"	"1666.8"	"1640.5"	""	"474"	"48"	"33.000"	"26.000"	"0.000411858796413602"	"26"	"0.0001889"	"0.0007193"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLTSFIEK"	"[R].qLTSFIEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"712.43170"	"1423.85613"	"1423.85609"	"0.03"	"0.00002"	"7/78"	"7"	"78"	"5004921.22119141"	"HCD"	"MS2"	"14.94325"	"400.6"	"100.000"	"49.1902"	"14516"	"14516"	"14495"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"633.8"	""	"512.1"	""	"549.1"	""	"708.0"	""	"670.5"	"718.8"	""	"474"	"40"	"33.000"	"26.000"	"0.00213672359612612"	""	"0.0002277"	"0.001125"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLTSFIEK"	"[R].qLTSFIEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"475.29031"	"1423.85639"	"1423.85609"	"0.21"	"0.00010"	"6/78"	"6"	"78"	"8193303.5848999"	"HCD"	"MS2"	"14.07558"	"267.5"	"100.000"	"49.2397"	"14584"	"14584"	"14558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.9"	""	"329.7"	""	"391.5"	""	"497.2"	"0.2"	"432.5"	"453.0"	""	"471"	"38"	"33.000"	"26.000"	"0.0039993638015474"	"21"	"0.0003839"	"0.001915"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVNELIYK"	"[K].sVNELIYk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"712.43201"	"1423.85674"	"1423.85609"	"0.46"	"0.00032"	"14/72"	"14"	"72"	"11552871.6595459"	"HCD"	"MS2"	"37.01812"	"853.4"	"100.000"	"44.1100"	"12443"	"12443"	"12422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1276.9"	""	"1135.1"	""	"1272.9"	""	"1351.7"	"7.1"	"1505.5"	"1529.5"	""	"469"	"47"	"33.000"	"26.000"	"0.000430668241515187"	"26"	"0.0001889"	"0.0007666"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLTSFIEK"	"[R].qLTSFIEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"712.43213"	"1423.85698"	"1423.85609"	"0.63"	"0.00045"	"7/78"	"7"	"78"	"5097962.52142334"	"HCD"	"MS2"	"13.98716"	"404.5"	"100.000"	"49.4743"	"14676"	"14676"	"14654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"623.4"	""	"519.9"	""	"541.3"	""	"745.2"	""	"688.8"	"710.3"	""	"469"	"42"	"33.000"	"26.000"	"0.00149328549652906"	""	"0.0003839"	"0.001837"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSYTQLLK"	"[R].lSYTQLLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"712.44867"	"1423.89006"	"1423.89247"	"-1.69"	"-0.00121"	"8/66"	"8"	"66"	"2771654.64569092"	"HCD"	"MS2"	"40.45235"	"152.0"	"100.000"	"54.8719"	"16862"	"16862"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.1"	""	"221.4"	""	"234.3"	""	"236.0"	""	"266.4"	"278.2"	""	"230"	"12"	"30.000"	"23.000"	"0.806673593182967"	"20"	"0.0002277"	"0.001174"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSYTQLLK"	"[R].lSYTQLLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"712.44928"	"1423.89128"	"1423.89247"	"-0.84"	"-0.00059"	"10/66"	"10"	"66"	"2872530.23303223"	"HCD"	"MS2"	"8.085424"	"187.8"	"100.000"	"54.6313"	"16710"	"16710"	"16688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.0"	""	"287.6"	""	"303.6"	""	"266.8"	""	"308.9"	"355.6"	""	"220"	"24"	"30.000"	"23.000"	"0.0444009932264365"	""	"0.0002277"	"0.001342"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSYTQLLK"	"[R].lSYTQLLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"712.45020"	"1423.89311"	"1423.89247"	"0.45"	"0.00032"	"14/66"	"14"	"66"	"2831487.22961426"	"HCD"	"MS2"	"38.78082"	"245.1"	"100.000"	"54.5615"	"16735"	"16735"	"16709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"404.8"	""	"398.0"	""	"394.0"	""	"300.1"	""	"356.6"	"464.6"	""	"212"	"43"	"30.000"	"23.000"	"0.000538649009114194"	""	"0.0001889"	"0.0005116"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSYTQLLK"	"[R].lSYTQLLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"712.45056"	"1423.89385"	"1423.89247"	"0.96"	"0.00069"	"14/66"	"14"	"66"	"1906568.47369385"	"HCD"	"MS2"	"34.75488"	"165.6"	"100.000"	"54.3276"	"16586"	"16586"	"16570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.6"	""	"264.9"	""	"252.8"	""	"213.2"	""	"270.3"	"300.1"	""	"212"	"44"	"30.000"	"23.000"	"0.000425898259499876"	""	"0.0001889"	"0.0007521"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLLPLEEYYR"	"[K].TKLLPLEEYYR.[F]"	""	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"712.90320"	"1424.79912"	"1424.77839"	"14.55"	"0.01036"	"7/112"	"7"	"112"	"2371203.88311768"	"HCD"	"MS2"	"16.63865"	"164.8"	"100.000"	"60.5022"	"19158"	"19158"	"19139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.3"	""	"213.2"	""	"229.1"	""	"272.3"	"8.6"	"289.7"	"315.8"	"NoQuanLabels"	"804"	"36"	"36.000"	"29.000"	"0.0092517961059822"	"19"	"0.004631"	"0.1345"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLLPLEEYYR"	"[K].TKLLPLEEYYR.[F]"	""	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"2"	"2"	"0.3095"	"0.0000"	"1"	"1"	"1"	"712.90369"	"1424.80010"	"1424.77839"	"15.23"	"0.01085"	"13/112"	"13"	"112"	"2384906.56445313"	"HCD"	"MS2"	"5.257635"	"163.0"	"100.000"	"60.3762"	"19053"	"19053"	"19033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"208.8"	""	"220.6"	""	"211.8"	""	"296.5"	"3.6"	"305.7"	"298.2"	"NoQuanLabels"	"800"	"42"	"36.000"	"29.000"	"0.00281228927953533"	"19"	"0.003976"	"0.1012"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFWEPMK"	"[R].lFWEPmk.[I]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"475.60498"	"1424.80039"	"1424.80122"	"-0.58"	"-0.00028"	"4/48"	"4"	"48"	"7424314.24377441"	"HCD"	"MS2"	"6.029855"	"214.4"	"100.000"	"56.8163"	"17657"	"17657"	"17637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.5"	""	"280.9"	""	"292.7"	""	"484.9"	"1.3"	"340.9"	"359.0"	""	"794"	"20"	"35.000"	"28.000"	"0.422464778235054"	"18"	"0.003415"	"0.07682"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFWEPMK"	"[R].lFWEPmk.[I]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"712.90411"	"1424.80095"	"1424.80122"	"-0.19"	"-0.00013"	"6/48"	"6"	"48"	"8363094.61895752"	"HCD"	"MS2"	"5.846994"	"496.9"	"100.000"	"56.8112"	"17655"	"17655"	"17637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"565.3"	""	"651.7"	""	"690.0"	""	"1157.6"	"4.5"	"805.6"	"829.1"	""	"795"	"16"	"35.000"	"29.000"	"0.949154984957988"	"16"	"0.001966"	"0.0277"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFWEPMK"	"[R].lFWEPmk.[I]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"475.60535"	"1424.80149"	"1424.80122"	"0.19"	"0.00009"	"4/48"	"4"	"48"	"7724043.67614746"	"HCD"	"MS2"	"14.4344"	"167.8"	"75.744"	"56.6226"	"17524"	"17524"	"17499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.4"	""	"224.6"	""	"228.8"	""	"388.4"	""	"277.2"	"273.4"	""	"796"	"22"	"35.000"	"29.000"	"0.281762422184887"	"19"	"0.003507"	"0.08146"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFWEPMK"	"[R].lFWEPmk.[I]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"712.90454"	"1424.80181"	"1424.80122"	"0.41"	"0.00030"	"6/48"	"6"	"48"	"7833687.74316406"	"HCD"	"MS2"	"7.299235"	"467.0"	"100.000"	"56.6086"	"17518"	"17518"	"17499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"534.0"	""	"613.8"	""	"658.9"	""	"1116.4"	""	"759.7"	"737.7"	""	"804"	"21"	"36.000"	"29.000"	"0.351743477641429"	"23"	"0.001355"	"0.01906"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQFLNAK"	"[K].vFQFLNAk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"3"	"3"	"0.3889"	"0.0000"	"1"	"1"	"1"	"475.62662"	"1424.86530"	"1424.86659"	"-0.91"	"-0.00043"	"8/68"	"8"	"68"	"4226419.08966064"	"HCD"	"MS2"	"30.86566"	"140.6"	"100.000"	"61.9618"	"19701"	"19701"	"19673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.0"	""	"223.8"	""	"234.9"	""	"244.0"	"0.6"	"228.9"	"200.2"	""	"376"	"18"	"32.000"	"25.000"	"0.312002338598261"	"25"	"0.0002277"	"0.001328"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQFLNAK"	"[K].vFQFLNAk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"712.93634"	"1424.86540"	"1424.86659"	"-0.83"	"-0.00059"	"7/68"	"7"	"68"	"6895829.11535645"	"HCD"	"MS2"	"29.9774"	"481.4"	"100.000"	"62.1026"	"19812"	"19812"	"19795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"684.3"	""	"731.5"	""	"813.3"	""	"840.0"	"7.0"	"796.7"	"677.0"	""	"374"	"40"	"32.000"	"25.000"	"0.00168593802732314"	"25"	"0.0001889"	"0.0008579"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGDLLPEAVR"	"[R].lLGDLLPEAVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5EIC4"	"Interferon regulatory factor 2-binding protein-like OS=Rattus norvegicus OX=10116 GN=Irf2bpl PE=1 SV=1"	"Q5EIC4"	"Interferon regulatory factor 2-binding protein-like OS=Rattus norvegicus OX=10116 GN=Irf2bpl PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"712.93646"	"1424.86565"	"1424.86743"	"-1.25"	"-0.00089"	"5/88"	"5"	"88"	"1173006.40814209"	"HCD"	"MS2"	"68.13707"	"59.3"	"100.000"	"70.8676"	"23381"	"23381"	"23354"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.3"	""	"69.7"	""	"70.0"	""	"115.8"	""	"120.2"	"113.4"	""	"372"	"19"	"32.000"	"25.000"	"0.245195753371492"	"18"	"0.0003839"	"0.002016"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQFLNAK"	"[K].vFQFLNAk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"475.62680"	"1424.86585"	"1424.86659"	"-0.52"	"-0.00025"	"5/68"	"5"	"68"	"4301832.76727295"	"HCD"	"MS2"	"3.860124"	"150.2"	"100.000"	"62.2316"	"19864"	"19864"	"19843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.3"	""	"224.7"	""	"254.3"	""	"260.0"	"2.7"	"233.7"	"214.7"	""	"369"	"28"	"32.000"	"25.000"	"0.032062425290426"	""	"0.0003146"	"0.00141"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQFLNAK"	"[K].vFQFLNAk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"712.93689"	"1424.86650"	"1424.86659"	"-0.06"	"-0.00004"	"14/68"	"14"	"68"	"7032546.97930908"	"HCD"	"MS2"	"14.87111"	"518.3"	"100.000"	"62.0193"	"19724"	"19724"	"19705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"749.2"	""	"836.1"	""	"887.2"	""	"861.4"	""	"848.6"	"719.1"	""	"367"	"47"	"32.000"	"25.000"	"0.000361939572077076"	""	"0.0001889"	"0.0009932"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGDLLPEAVR"	"[R].lLGDLLPEAVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5EIC4"	"Interferon regulatory factor 2-binding protein-like OS=Rattus norvegicus OX=10116 GN=Irf2bpl PE=1 SV=1"	"Q5EIC4"	"Interferon regulatory factor 2-binding protein-like OS=Rattus norvegicus OX=10116 GN=Irf2bpl PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"712.93726"	"1424.86724"	"1424.86743"	"-0.14"	"-0.00010"	"5/88"	"5"	"88"	"989506.353271484"	"HCD"	"MS2"	"59.22471"	"55.8"	"100.000"	"70.9617"	"23367"	"23367"	"23347"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.0"	""	"71.8"	""	"73.7"	""	"97.8"	""	"109.4"	"111.7"	""	"357"	"18"	"32.000"	"25.000"	"0.31596444905966"	"17"	"0.0001889"	"0.0007254"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPALQNAITR"	"[R].lVPALQNAITR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"712.94275"	"1424.87822"	"1424.87866"	"-0.31"	"-0.00022"	"10/90"	"10"	"90"	"3174120.64080811"	"HCD"	"MS2"	"18.7237"	"175.6"	"100.000"	"52.7976"	"15982"	"15982"	"15954"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.7"	""	"250.6"	""	"243.2"	""	"253.3"	"2.9"	"347.0"	"318.3"	""	"273"	"39"	"31.000"	"24.000"	"0.00159636666874212"	"16"	"0"	"5.256E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEFFGLK"	"[R].iLEFFGLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"712.94885"	"1424.89043"	"1424.89174"	"-0.92"	"-0.00066"	"7/56"	"7"	"56"	"361170.792236328"	"HCD"	"MS2"	"41.02729"	"32.7"	"100.000"	"85.2610"	"29241"	"29241"	"29218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.5"	""	"35.9"	""	"54.8"	""	"64.9"	""	"47.4"	"66.8"	""	"246"	"41"	"30.000"	"23.000"	"0.000886962199394967"	"23"	"0.0001308"	"0.0002488"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEFFGLK"	"[R].iLEFFGLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"712.94928"	"1424.89128"	"1424.89174"	"-0.32"	"-0.00023"	"14/56"	"14"	"56"	"468413.066650391"	"HCD"	"MS2"	"27.5607"	"41.2"	"100.000"	"85.2436"	"29183"	"29183"	"29163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.1"	""	"52.3"	""	"66.1"	""	"85.4"	"2.2"	"66.2"	"68.2"	""	"231"	"45"	"30.000"	"23.000"	"0.000340080698703757"	""	"0"	"0.0001659"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPLIAK"	"[K].vNIVPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"475.65750"	"1424.95795"	"1424.96049"	"-1.78"	"-0.00085"	"9/80"	"9"	"80"	"3871253.92608643"	"HCD"	"MS2"	"3.757019"	"125.2"	"100.000"	"61.6228"	"19616"	"19616"	"19587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.6"	""	"178.6"	""	"193.2"	""	"206.2"	""	"213.6"	"223.8"	""	"44"	"32"	"23.000"	"16.000"	"0.00147035661865095"	""	"0.0003839"	"0.002033"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPLIAK"	"[K].vNIVPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.98328"	"1424.95928"	"1424.96049"	"-0.85"	"-0.00061"	"7/80"	"7"	"80"	"2975930.03253174"	"HCD"	"MS2"	"16.26038"	"179.9"	"100.000"	"61.5466"	"19585"	"19585"	"19555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"285.2"	""	"268.4"	""	"255.5"	""	"294.0"	""	"275.2"	"322.5"	""	"44"	"43"	"23.000"	"16.000"	"0.000107999732753573"	"15"	"0.0001889"	"0.0005095"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPLIAK"	"[K].vNIVPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"475.65805"	"1424.95960"	"1424.96049"	"-0.63"	"-0.00030"	"10/80"	"10"	"80"	"5345791.17877197"	"HCD"	"MS2"	"6.926214"	"156.0"	"100.000"	"61.4872"	"19507"	"19507"	"19481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.3"	""	"228.3"	""	"210.8"	""	"264.1"	""	"279.4"	"279.3"	""	"44"	"40"	"23.000"	"16.000"	"0.000245709914511723"	"15"	"0.0001889"	"0.0004847"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPLIAK"	"[K].vNIVPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"475.65808"	"1424.95969"	"1424.96049"	"-0.56"	"-0.00027"	"10/80"	"10"	"80"	"1958073.55761719"	"HCD"	"MS2"	"21.85111"	"72.0"	"100.000"	"61.9320"	"19742"	"19742"	"19715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.2"	""	"104.6"	""	"110.6"	""	"115.6"	""	"132.3"	"124.3"	""	"43"	"37"	"23.000"	"16.000"	"0.000454400143564879"	"15"	"0.0003839"	"0.001975"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPLIAK"	"[K].vNIVPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.98376"	"1424.96025"	"1424.96049"	"-0.17"	"-0.00012"	"8/80"	"8"	"80"	"9335858.84020996"	"HCD"	"MS2"	"8.172062"	"463.9"	"100.000"	"61.6209"	"19562"	"19562"	"19545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"662.1"	""	"602.1"	""	"650.4"	""	"764.0"	""	"813.7"	"904.1"	""	"43"	"43"	"23.000"	"16.000"	"9.75974475797937E-05"	"15"	"0.0001889"	"0.0006731"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPLIAK"	"[K].vNIVPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.98389"	"1424.96050"	"1424.96049"	"0.00"	"0.00000"	"12/80"	"12"	"80"	"7417255.28283691"	"HCD"	"MS2"	"20.2319"	"334.2"	"100.000"	"61.8283"	"19700"	"19700"	"19683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"456.5"	""	"451.8"	""	"458.4"	""	"561.2"	""	"608.9"	"630.7"	""	"43"	"36"	"23.000"	"16.000"	"0.00051574907758919"	"15"	"0.0001889"	"0.0009355"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIVPLIAK"	"[K].vNIVPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"Q9JJM9"	"Septin-5 OS=Rattus norvegicus OX=10116 GN=Sept5 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.98413"	"1424.96099"	"1424.96049"	"0.35"	"0.00025"	"12/80"	"12"	"80"	"1191651.29998779"	"HCD"	"MS2"	"43.96359"	"95.0"	"100.000"	"61.3024"	"19432"	"19432"	"19401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.7"	""	"129.5"	""	"147.4"	""	"152.1"	"0.5"	"151.7"	"167.0"	""	"43"	"34"	"23.000"	"16.000"	"0.000951565000579647"	"15"	"0"	"0.0001356"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMAQSIYGGR"	"[K].tLMAQSIYGGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"713.38947"	"1425.77165"	"1425.77215"	"-0.35"	"-0.00025"	"8/102"	"8"	"102"	"4014661.27862549"	"HCD"	"MS2"	"0"	"227.5"	"100.000"	"40.0484"	"10794"	"10794"	"10773"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"319.2"	"2.7"	"306.6"	""	"322.8"	""	"307.3"	""	"427.8"	"472.2"	""	"809"	"47"	"36.000"	"29.000"	"0.000850978378885538"	"22"	"0"	"2.26E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMAQSIYGGR"	"[K].tLMAQSIYGGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"713.38953"	"1425.77178"	"1425.77215"	"-0.26"	"-0.00019"	"9/102"	"9"	"102"	"3640093.80780029"	"HCD"	"MS2"	"0"	"202.2"	"100.000"	"40.1633"	"10885"	"10885"	"10861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"280.5"	""	"254.4"	""	"311.4"	""	"276.9"	""	"390.0"	"405.3"	""	"809"	"50"	"36.000"	"29.000"	"0.000408242792418018"	"23"	"0"	"3.092E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELLTHLWR"	"[K].eELLTHLWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7959"	"0.0000"	"1"	"1"	"1"	"475.93951"	"1425.80399"	"1425.80517"	"-0.82"	"-0.00039"	"8/72"	"8"	"72"	"2693359.80841064"	"HCD"	"MS2"	"33.35673"	"74.3"	"100.000"	"50.8807"	"15198"	"15198"	"15170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.8"	""	"75.1"	""	"139.5"	""	"113.8"	""	"113.8"	"193.3"	""	"762"	"49"	"35.000"	"28.000"	"0.000512772794895316"	"25"	"0"	"0.0001412"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPLWYK"	"[K].fNPLWYk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q924C3"	"Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Rattus norvegicus OX=10116 GN=Enpp1 PE=1 SV=2"	"Q924C3"	"Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Rattus norvegicus OX=10116 GN=Enpp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"713.42035"	"1425.83342"	"1425.82948"	"2.77"	"0.00197"	"6/60"	"6"	"60"	"2078336.13146973"	"HCD"	"MS2"	"43.12532"	"157.5"	"100.000"	"60.3159"	"19029"	"19029"	"19001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.3"	""	"196.2"	""	"204.1"	""	"263.2"	"1.4"	"308.3"	"332.4"	""	"595"	"17"	"34.000"	"27.000"	"0.590863237913819"	"16"	"0.0006737"	"0.006412"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALYAAPYK"	"[K].aALYAAPYk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"713.42938"	"1425.85149"	"1425.85061"	"0.62"	"0.00044"	"13/66"	"13"	"66"	"2125607.05090332"	"HCD"	"MS2"	"13.29209"	"167.3"	"100.000"	"40.6460"	"11083"	"11083"	"11053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"245.2"	""	"223.2"	""	"248.7"	""	"242.3"	""	"311.6"	"313.9"	""	"492"	"44"	"33.000"	"26.000"	"0.000884983364483127"	"20"	"0"	"0.0001225"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALYAAPYK"	"[K].aALYAAPYk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.42999"	"1425.85271"	"1425.85061"	"1.47"	"0.00105"	"13/66"	"13"	"66"	"2622290.2244873"	"HCD"	"MS2"	"6.648042"	"206.8"	"100.000"	"40.4581"	"10962"	"10962"	"10933"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"316.2"	""	"283.2"	""	"311.4"	""	"285.9"	"4.1"	"366.4"	"390.5"	""	"492"	"45"	"33.000"	"26.000"	"0.00085690979498859"	"16"	"0.0001859"	"0.0003719"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLELIPELR"	"[K].tLLELIPELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"475.96701"	"1425.88648"	"1425.88783"	"-0.95"	"-0.00045"	"10/86"	"10"	"86"	"642596.411132813"	"HCD"	"MS2"	"34.09896"	"8.1"	"100.000"	"81.2946"	"27573"	"27573"	"27552"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"9.5"	""	"9.8"	""	"14.6"	""	"16.1"	"14.9"	""	"245"	"30"	"30.000"	"23.000"	"0.0126513272205771"	"21"	"0.0001308"	"0.0003026"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTAMDNASK"	"[R].mTAMDNASk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.87494"	"1426.74260"	"1426.74344"	"-0.59"	"-0.00042"	"9/82"	"9"	"82"	"572271.351318359"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"32.0968"	"7548"	"7548"	"7522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.8"	""	"66.6"	""	"64.7"	""	"70.7"	""	"101.2"	"89.4"	""	"675"	"5"	"35.000"	"28.000"	"10.9464620855405"	"13"	"0.002711"	"0.04239"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHPGYFGK"	"[K].yHPGYFGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.26694"	"1426.78626"	"1426.78834"	"-1.46"	"-0.00069"	"11/58"	"11"	"58"	"38214458.1387939"	"HCD"	"MS2"	"25.06104"	"629.6"	"31.634"	"33.2778"	"8072"	"8072"	"8063"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"824.3"	""	"872.8"	""	"916.2"	""	"1042.0"	""	"1191.1"	"1127.9"	""	"658"	"26"	"35.000"	"28.000"	"0.0743354368402701"	"14"	"0.000523"	"0.00282"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHPGYFGK"	"[K].yHPGYFGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.26694"	"1426.78626"	"1426.78834"	"-1.46"	"-0.00069"	"6/58"	"6"	"58"	"8601597.83416748"	"HCD"	"MS2"	"29.57987"	"442.1"	"100.000"	"33.4561"	"8098"	"8098"	"8084"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"600.9"	""	"630.7"	""	"655.1"	""	"715.7"	""	"805.5"	"784.5"	""	"658"	"18"	"35.000"	"28.000"	"0.558722161659914"	"14"	"0.0003839"	"0.001636"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHPGYFGK"	"[K].yHPGYFGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"476.26730"	"1426.78736"	"1426.78834"	"-0.69"	"-0.00033"	"5/58"	"5"	"58"	"7464162.00848389"	"HCD"	"MS2"	"54.46571"	"442.7"	"100.000"	"33.5593"	"8183"	"8183"	"8166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"608.4"	""	"576.0"	""	"608.7"	""	"737.9"	""	"839.3"	"827.6"	""	"664"	"7"	"35.000"	"28.000"	"6.54844348390132"	"15"	"0.0004166"	"0.002176"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHPGYFGK"	"[K].yHPGYFGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.26736"	"1426.78754"	"1426.78834"	"-0.56"	"-0.00027"	"6/58"	"6"	"58"	"27211617.7397461"	"HCD"	"MS2"	"29.83789"	"675.3"	"50.851"	"33.1732"	"7988"	"7988"	"7970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"891.2"	""	"941.9"	""	"971.9"	""	"1029.2"	""	"1328.4"	"1242.5"	""	"661"	"25"	"35.000"	"28.000"	"0.100039488798748"	"14"	"0.0003839"	"0.001784"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FELTGIPPAPR"	"[K].fELTGIPPAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"713.91638"	"1426.82549"	"1426.82557"	"-0.06"	"-0.00004"	"7/84"	"7"	"84"	"3166807.54058838"	"HCD"	"MS2"	"48.05004"	"183.2"	"100.000"	"52.7607"	"15967"	"15967"	"15938"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"263.3"	""	"258.8"	""	"252.2"	""	"288.0"	"3.2"	"339.2"	"330.5"	""	"595"	"21"	"34.000"	"27.000"	"0.220539796787023"	"21"	"0.0001889"	"0.0003826"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVISSSSFK"	"[R].nVISSSSFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97834"	"COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV=1"	"P97834"	"COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"713.91827"	"1426.82927"	"1426.83060"	"-0.93"	"-0.00066"	"8/86"	"8"	"86"	"4585557.1630249"	"HCD"	"MS2"	"0"	"364.4"	"100.000"	"38.0316"	"10013"	"10013"	"9985"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"523.0"	"3.0"	"487.7"	""	"539.2"	""	"589.8"	""	"660.7"	"648.2"	""	"583"	"44"	"34.000"	"27.000"	"0.00122924530749432"	"27"	"0"	"0.0001716"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVISSSSFK"	"[R].nVISSSSFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97834"	"COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV=1"	"P97834"	"COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"713.91901"	"1426.83074"	"1426.83060"	"0.09"	"0.00007"	"8/86"	"8"	"86"	"5424339.53344727"	"HCD"	"MS2"	"0"	"412.1"	"100.000"	"37.8812"	"9908"	"9908"	"9879"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"616.1"	""	"565.0"	""	"628.8"	""	"629.5"	"6.3"	"711.6"	"743.6"	""	"563"	"45"	"34.000"	"27.000"	"0.000859960293370167"	"23"	"0"	"0.0001825"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVGFVFTK"	"[R].gNVGFVFTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.92657"	"1426.84587"	"1426.84586"	"0.01"	"0.00001"	"8/78"	"8"	"78"	"12673318.4172974"	"HCD"	"MS2"	"18.01655"	"980.4"	"100.000"	"49.4619"	"14627"	"14627"	"14607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1388.1"	""	"1455.6"	""	"1531.6"	""	"1499.9"	"12.4"	"1681.0"	"1709.8"	""	"514"	"60"	"34.000"	"27.000"	"2.45433094607509E-05"	"16"	"7.476E-05"	"0.0001901"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVGFVFTK"	"[R].gNVGFVFTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.92810"	"1426.84892"	"1426.84586"	"2.15"	"0.00153"	"8/78"	"8"	"78"	"11529239.7636108"	"HCD"	"MS2"	"0"	"922.3"	"100.000"	"49.7199"	"14776"	"14776"	"14750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1328.0"	""	"1344.5"	""	"1433.4"	""	"1413.9"	"7.9"	"1622.4"	"1579.3"	""	"500"	"60"	"33.000"	"26.000"	"2.42627491811372E-05"	"16"	"0.0001889"	"0.0004618"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGVIAGLNVLR"	"[K].dAGVIAGLNVLR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"476.29001"	"1426.85547"	"1426.85793"	"-1.72"	"-0.00082"	"16/94"	"16"	"94"	"3188144.6807251"	"HCD"	"MS2"	"51.59834"	"61.9"	"100.000"	"57.1109"	"17778"	"17778"	"17749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.6"	""	"76.8"	""	"84.2"	""	"102.1"	""	"116.0"	"118.2"	""	"454"	"54"	"33.000"	"26.000"	"8.67013494806906E-05"	"20"	"0"	"0.0001169"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNIPVNHK"	"[R].fNIPVNHk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUW3"	"Complement factor I OS=Rattus norvegicus OX=10116 GN=Cfi PE=2 SV=1"	"Q9WUW3"	"Complement factor I OS=Rattus norvegicus OX=10116 GN=Cfi PE=2 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"476.29022"	"1426.85611"	"1426.85709"	"-0.68"	"-0.00033"	"7/70"	"7"	"70"	"28975531.9038086"	"HCD"	"MS2"	"19.9274"	"355.4"	"29.158"	"36.2648"	"9244"	"9244"	"9226"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"552.4"	""	"527.9"	""	"486.4"	""	"611.9"	""	"586.8"	"599.8"	""	"458"	"18"	"33.000"	"26.000"	"0.361272980761151"	"22"	"0.0002277"	"0.001261"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNIPVNHK"	"[R].fNIPVNHk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUW3"	"Complement factor I OS=Rattus norvegicus OX=10116 GN=Cfi PE=2 SV=1"	"Q9WUW3"	"Complement factor I OS=Rattus norvegicus OX=10116 GN=Cfi PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"476.29037"	"1426.85657"	"1426.85709"	"-0.36"	"-0.00017"	"9/70"	"9"	"70"	"31006354.8847656"	"HCD"	"MS2"	"17.87302"	"345.5"	"26.036"	"36.3518"	"9323"	"9323"	"9305"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"538.3"	""	"529.3"	""	"459.0"	""	"605.8"	"0.3"	"593.7"	"542.1"	""	"447"	"20"	"33.000"	"26.000"	"0.210028159911197"	"24"	"0.0006737"	"0.006488"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLNNDNLLR"	"[R].lLLNNDNLLR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"B2GUZ5; Q3T1K5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1;F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"B2GUZ5; Q3T1K5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1; F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"713.93219"	"1426.85710"	"1426.85793"	"-0.58"	"-0.00041"	"8/84"	"8"	"84"	"11686924.5510864"	"HCD"	"MS2"	"0.9176825"	"365.5"	"65.608"	"55.8175"	"17196"	"17196"	"17179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"535.2"	"2.8"	"523.4"	""	"547.8"	""	"572.8"	"5.0"	"624.8"	"647.2"	""	"450"	"60"	"33.000"	"26.000"	"2.12413697164332E-05"	""	"0.0001308"	"0.0002159"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLNNDNLLR"	"[R].lLLNNDNLLR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"B2GUZ5; Q3T1K5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1;F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"B2GUZ5; Q3T1K5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1; F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"713.93231"	"1426.85735"	"1426.85793"	"-0.41"	"-0.00029"	"8/84"	"8"	"84"	"6869414.02307129"	"HCD"	"MS2"	"14.41159"	"296.7"	"100.000"	"55.7405"	"17218"	"17218"	"17189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"448.2"	""	"433.4"	""	"427.0"	""	"475.3"	"1.0"	"520.5"	"502.3"	""	"450"	"58"	"33.000"	"26.000"	"3.33566569157839E-05"	""	"0"	"0.0001208"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLNNDNLLR"	"[R].lLLNNDNLLR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"B2GUZ5; Q3T1K5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1;F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"B2GUZ5; Q3T1K5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1; F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"713.93256"	"1426.85784"	"1426.85793"	"-0.07"	"-0.00005"	"8/84"	"8"	"84"	"10906792.1735229"	"HCD"	"MS2"	"1.072043"	"428.9"	"88.468"	"56.0237"	"17334"	"17334"	"17317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"631.8"	""	"595.0"	""	"663.4"	""	"651.2"	"2.9"	"763.4"	"752.5"	""	"442"	"56"	"33.000"	"26.000"	"5.15694231764101E-05"	""	"0"	"0.000164"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGVIAGLNVLR"	"[K].dAGVIAGLNVLR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"713.93280"	"1426.85832"	"1426.85793"	"0.28"	"0.00020"	"10/94"	"10"	"94"	"3378395.05511475"	"HCD"	"MS2"	"18.29219"	"238.7"	"100.000"	"57.1733"	"17803"	"17803"	"17781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"381.0"	""	"309.1"	""	"301.6"	""	"357.3"	"8.5"	"444.0"	"460.9"	""	"442"	"66"	"33.000"	"26.000"	"5.97574798468054E-06"	""	"0"	"4.229E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGVIAGLNVLR"	"[K].dAGVIAGLNVLR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"713.93323"	"1426.85918"	"1426.85793"	"0.88"	"0.00062"	"10/94"	"10"	"94"	"2777509.02972412"	"HCD"	"MS2"	"36.67978"	"207.1"	"100.000"	"57.0088"	"17682"	"17682"	"17659"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.4"	""	"248.0"	""	"251.5"	""	"292.5"	"2.1"	"433.2"	"417.7"	""	"434"	"46"	"33.000"	"26.000"	"0.000520546743427229"	"23"	"0"	"6.851E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLNNDNLLR"	"[R].lLLNNDNLLR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"B2GUZ5; Q3T1K5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1;F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"B2GUZ5; Q3T1K5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1; F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"713.93433"	"1426.86138"	"1426.85793"	"2.42"	"0.00172"	"8/84"	"8"	"84"	"5305383.31115723"	"HCD"	"MS2"	"8.758141"	"245.5"	"100.000"	"55.5298"	"17078"	"17078"	"17051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.4"	""	"371.2"	""	"365.9"	""	"406.3"	""	"408.3"	"396.9"	""	"443"	"60"	"33.000"	"26.000"	"2.12018486791808E-05"	""	"0.0001308"	"0.0002068"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTPLLHK"	"[R].iFTPLLHk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"476.31067"	"1426.91745"	"1426.91863"	"-0.82"	"-0.00039"	"8/56"	"8"	"56"	"33575539.7946167"	"HCD"	"MS2"	"25.66147"	"985.2"	"93.928"	"49.7904"	"14804"	"14804"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1423.9"	""	"1351.1"	""	"1393.6"	""	"1602.8"	"4.5"	"1774.5"	"1779.8"	""	"151"	"33"	"28.000"	"21.000"	"0.00417779332457881"	""	"0.0001859"	"0.0003644"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTPLLHK"	"[R].iFTPLLHk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"476.31104"	"1426.91855"	"1426.91863"	"-0.05"	"-0.00003"	"10/56"	"10"	"56"	"41461202.0360107"	"HCD"	"MS2"	"19.09924"	"463.7"	"38.300"	"49.5461"	"14658"	"14658"	"14639"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"670.4"	""	"595.8"	""	"701.7"	""	"751.5"	""	"825.6"	"851.7"	""	"120"	"28"	"27.000"	"20.000"	"0.0103074503229455"	""	"0.0001859"	"0.0003577"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPENFFLLR"	"[K].yPENFFLLR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P63088; P62138; P62142"	"Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"714.39716"	"1427.78703"	"1427.78845"	"-0.99"	"-0.00071"	"14/74"	"14"	"74"	"8688825.9744873"	"HCD"	"MS2"	"3.623345"	"360.8"	"100.000"	"65.9857"	"21397"	"21397"	"21379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"439.3"	""	"440.5"	""	"489.0"	""	"609.5"	"7.3"	"687.1"	"750.2"	""	"676"	"30"	"35.000"	"28.000"	"0.0316895958340947"	"28"	"0.0001889"	"0.0007621"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPENFFLLR"	"[K].yPENFFLLR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P63088; P62138; P62142"	"Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"714.39728"	"1427.78728"	"1427.78845"	"-0.82"	"-0.00059"	"6/74"	"6"	"74"	"6679103.9979248"	"HCD"	"MS2"	"6.272627"	"289.2"	"99.272"	"66.0906"	"21387"	"21387"	"21369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"357.8"	""	"370.3"	""	"409.3"	""	"464.6"	"16.1"	"553.1"	"572.2"	""	"678"	"28"	"35.000"	"28.000"	"0.0554880800764027"	"27"	"0.0001889"	"0.0007148"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPENFFLLR"	"[K].yPENFFLLR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P63088; P62138; P62142"	"Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.2692"	"0.0000"	"1"	"1"	"1"	"714.39746"	"1427.78765"	"1427.78845"	"-0.57"	"-0.00040"	"6/74"	"6"	"74"	"3816119.1751709"	"HCD"	"MS2"	"8.712639"	"162.8"	"100.000"	"65.6727"	"21269"	"21269"	"21251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.4"	""	"197.6"	""	"203.0"	""	"265.8"	"4.6"	"329.0"	"353.9"	""	"664"	"26"	"35.000"	"28.000"	"0.0783678773415952"	""	"0.0001859"	"0.0003219"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPENFFLLR"	"[K].yPENFFLLR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P63088; P62138; P62142"	"Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"714.39764"	"1427.78801"	"1427.78845"	"-0.31"	"-0.00022"	"8/74"	"8"	"74"	"5497941.79614258"	"HCD"	"MS2"	"18.0707"	"232.8"	"100.000"	"65.7732"	"21258"	"21258"	"21241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"250.8"	""	"259.0"	""	"300.9"	""	"410.5"	""	"484.9"	"511.4"	""	"662"	"11"	"35.000"	"28.000"	"2.75313808234984"	"19"	"0.0001889"	"0.001006"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAFTVVCK"	"[R].vGAFTVVck.[D]"	"N-Term(TMT6plex); C8(Methylthio); K9(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"714.40979"	"1427.81230"	"1427.81549"	"-2.23"	"-0.00159"	"14/64"	"14"	"64"	"3018887.7800293"	"HCD"	"MS2"	"28.09776"	"219.6"	"100.000"	"60.6247"	"19208"	"19208"	"19187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"335.8"	""	"363.7"	""	"402.3"	""	"256.2"	"0.6"	"342.4"	"373.8"	""	"663"	"42"	"35.000"	"28.000"	"0.00203931133303321"	"24"	"0.0001308"	"0.0002174"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAFTVVCK"	"[R].vGAFTVVck.[D]"	"N-Term(TMT6plex); C8(Methylthio); K9(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"714.41162"	"1427.81597"	"1427.81549"	"0.34"	"0.00024"	"8/64"	"8"	"64"	"3511720.32904053"	"HCD"	"MS2"	"18.6196"	"250.4"	"100.000"	"60.5279"	"19115"	"19115"	"19097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.9"	""	"422.9"	""	"459.6"	""	"296.8"	""	"376.1"	"408.5"	""	"695"	"54"	"35.000"	"28.000"	"0.000143864886999856"	"23"	"0.0001308"	"0.0002296"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEYGFQVK"	"[R].vEYGFQVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"714.41699"	"1427.82671"	"1427.82987"	"-2.22"	"-0.00158"	"7/60"	"7"	"60"	"2696392.05621338"	"HCD"	"MS2"	"35.43174"	"246.6"	"100.000"	"43.5665"	"12271"	"12271"	"12244"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"492.1"	""	"429.0"	""	"310.6"	""	"370.0"	""	"385.3"	"343.2"	""	"675"	"41"	"35.000"	"28.000"	"0.00287921288480936"	""	"0.0001889"	"0.0007016"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEYGFQVK"	"[R].vEYGFQVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"714.41797"	"1427.82866"	"1427.82987"	"-0.85"	"-0.00061"	"7/60"	"7"	"60"	"1530584.19805908"	"HCD"	"MS2"	"0"	"154.7"	"100.000"	"43.6601"	"12260"	"12260"	"12237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"294.9"	""	"255.9"	""	"198.8"	""	"233.6"	""	"242.1"	"238.8"	""	"665"	"41"	"35.000"	"28.000"	"0.0028300339770229"	""	"0.0001859"	"0.0003277"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGVIAGLNVLR"	"[K].dAGVIAGLnVLR.[I]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"714.41815"	"1427.82903"	"1427.84194"	"-9.05"	"-0.00646"	"11/94"	"11"	"94"	"5602037.85461426"	"HCD"	"MS2"	"22.6406"	"394.7"	"100.000"	"56.8136"	"17602"	"17602"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"467.8"	""	"482.4"	""	"519.4"	""	"708.9"	""	"824.9"	"746.6"	""	"661"	"32"	"35.000"	"28.000"	"0.0204254420245746"	"18"	"0.0003839"	"0.001847"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGVIAGLNVLR"	"[K].dAGVIAGLnVLR.[I]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"714.41827"	"1427.82927"	"1427.84194"	"-8.88"	"-0.00634"	"11/94"	"11"	"94"	"6116766.58392334"	"HCD"	"MS2"	"32.01503"	"447.9"	"100.000"	"57.0211"	"17741"	"17741"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"569.2"	""	"544.8"	""	"575.3"	""	"812.4"	"1.7"	"908.4"	"838.0"	""	"646"	"30"	"35.000"	"28.000"	"0.0330523636506683"	"18"	"0.0004166"	"0.002298"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEYGFQVK"	"[R].vEYGFQVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"714.41840"	"1427.82952"	"1427.82987"	"-0.25"	"-0.00018"	"7/60"	"7"	"60"	"1875998.82885742"	"HCD"	"MS2"	"0"	"178.5"	"100.000"	"43.8712"	"12395"	"12395"	"12375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.9"	""	"306.9"	""	"220.8"	""	"263.4"	""	"271.1"	"278.3"	""	"650"	"41"	"35.000"	"28.000"	"0.00261747993389697"	""	"0.0001308"	"0.000282"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEYGFQVK"	"[R].vEYGFQVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"714.41858"	"1427.82988"	"1427.82987"	"0.01"	"0.00000"	"7/60"	"7"	"60"	"2799568.300354"	"HCD"	"MS2"	"24.08031"	"250.0"	"100.000"	"43.3645"	"12140"	"12140"	"12117"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"499.5"	""	"448.5"	""	"296.1"	""	"376.4"	""	"391.2"	"349.9"	""	"648"	"40"	"35.000"	"28.000"	"0.00353626669009397"	"28"	"0.0001889"	"0.0003967"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYAVAVVK"	"[K].gYYAVAVVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"714.43549"	"1427.86370"	"1427.86626"	"-1.79"	"-0.00128"	"8/66"	"8"	"66"	"6461061.91247559"	"HCD"	"MS2"	"24.29229"	"498.9"	"100.000"	"42.8729"	"11947"	"11947"	"11939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"682.3"	""	"814.1"	""	"761.7"	""	"710.6"	""	"797.3"	"960.9"	""	"436"	"55"	"33.000"	"26.000"	"7.23529917464691E-05"	"22"	"0.0001308"	"0.0002697"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYAVAVVK"	"[K].gYYAVAVVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"714.43567"	"1427.86406"	"1427.86626"	"-1.54"	"-0.00110"	"8/66"	"8"	"66"	"4958672.84844971"	"HCD"	"MS2"	"33.95771"	"402.7"	"100.000"	"43.1591"	"12109"	"12109"	"12091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"504.4"	""	"642.9"	""	"626.0"	""	"612.2"	""	"667.7"	"767.5"	""	"429"	"44"	"33.000"	"26.000"	"0.00083258253504994"	"17"	"0"	"0.0001757"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYAVAVVK"	"[K].gYYAVAVVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"476.62628"	"1427.86429"	"1427.86626"	"-1.38"	"-0.00066"	"7/66"	"7"	"66"	"48177050.5170898"	"HCD"	"MS2"	"8.912308"	"1593.6"	"100.000"	"42.6141"	"11842"	"11842"	"11820"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2092.3"	""	"2852.6"	""	"2623.6"	""	"2259.8"	""	"2354.9"	"2893.0"	""	"427"	"39"	"33.000"	"26.000"	"0.00250263710544526"	"22"	"0.0001889"	"0.000426"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYAVAVVK"	"[K].gYYAVAVVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"476.62646"	"1427.86484"	"1427.86626"	"-0.99"	"-0.00047"	"7/66"	"7"	"66"	"45893558.0167236"	"HCD"	"MS2"	"7.149507"	"1714.6"	"97.290"	"42.8864"	"11998"	"11998"	"11971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2231.7"	""	"3119.0"	""	"2864.4"	""	"2474.1"	""	"2469.3"	"3053.5"	""	"425"	"39"	"33.000"	"26.000"	"0.00256070137329007"	"22"	"0.0001889"	"0.0004238"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYAVAVVK"	"[K].gYYAVAVVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"714.43622"	"1427.86516"	"1427.86626"	"-0.77"	"-0.00055"	"8/66"	"8"	"66"	"69740956.0115967"	"HCD"	"MS2"	"0"	"2585.5"	"50.123"	"42.6070"	"11839"	"11839"	"11820"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3268.2"	""	"4704.7"	""	"4325.4"	""	"3661.2"	""	"3747.0"	"4771.5"	""	"438"	"56"	"33.000"	"26.000"	"5.22930670957986E-05"	"22"	"0.0001889"	"0.000647"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYAVAVVK"	"[K].gYYAVAVVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"714.43634"	"1427.86540"	"1427.86626"	"-0.60"	"-0.00043"	"8/66"	"8"	"66"	"57458148.2225342"	"HCD"	"MS2"	"0"	"2118.5"	"50.853"	"42.8681"	"11990"	"11990"	"11971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2688.5"	""	"3858.4"	""	"3485.3"	""	"3029.7"	""	"3080.1"	"3894.1"	""	"438"	"58"	"33.000"	"26.000"	"3.36855866226364E-05"	"23"	"0.0001889"	"0.0004116"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFPSIVGRPR"	"[R].aVFPSIVGRPR.[H]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.43713"	"1427.86699"	"1427.86843"	"-1.01"	"-0.00072"	"9/84"	"9"	"84"	"6699742.84771729"	"HCD"	"MS2"	"7.266115"	"221.3"	"100.000"	"38.1854"	"10076"	"10076"	"10049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"532.2"	""	"453.7"	""	"421.8"	""	"232.6"	""	"184.8"	"251.6"	""	"420"	"30"	"33.000"	"26.000"	"0.0199167877293188"	"14"	"0"	"0.0001456"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFPSIVGRPR"	"[R].aVFPSIVGRPR.[H]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.62720"	"1427.86704"	"1427.86843"	"-0.98"	"-0.00047"	"9/84"	"9"	"84"	"53457566.1550293"	"HCD"	"MS2"	"23.89038"	"891.9"	"55.561"	"37.9684"	"9944"	"9944"	"9927"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1929.3"	""	"1634.4"	""	"1411.0"	""	"953.0"	""	"985.6"	"1493.7"	""	"420"	"44"	"33.000"	"26.000"	"0.00080950455109812"	"15"	"0"	"1.683E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFPSIVGRPR"	"[R].aVFPSIVGRPR.[H]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.43750"	"1427.86772"	"1427.86843"	"-0.50"	"-0.00036"	"13/84"	"13"	"84"	"6830355.35546875"	"HCD"	"MS2"	"0"	"246.0"	"100.000"	"38.0993"	"9997"	"9997"	"9975"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"618.4"	""	"506.8"	""	"443.0"	""	"272.7"	""	"197.7"	"273.5"	""	"420"	"30"	"33.000"	"26.000"	"0.0209517013402736"	"14"	"0"	"0.0001466"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFPSIVGRPR"	"[R].aVFPSIVGRPR.[H]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"476.62747"	"1427.86786"	"1427.86843"	"-0.40"	"-0.00019"	"10/84"	"10"	"84"	"151867367.864258"	"HCD"	"MS2"	"5.377823"	"249.1"	"5.842"	"38.3939"	"10162"	"10162"	"10145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"540.7"	""	"476.9"	""	"416.2"	""	"285.6"	""	"280.1"	"347.5"	""	"414"	"40"	"33.000"	"26.000"	"0.00205102212592803"	"16"	"0"	"2.927E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFPSIVGRPR"	"[R].aVFPSIVGRPR.[H]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"476.62747"	"1427.86786"	"1427.86843"	"-0.40"	"-0.00019"	"9/84"	"9"	"84"	"106939814.818848"	"HCD"	"MS2"	"17.68934"	"471.4"	"17.096"	"38.0825"	"10034"	"10034"	"10017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1015.6"	""	"875.6"	""	"779.7"	""	"494.8"	""	"491.3"	"784.4"	""	"414"	"44"	"33.000"	"26.000"	"0.000748118415663999"	"17"	"0"	"1.761E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFPSIVGRPR"	"[R].aVFPSIVGRPR.[H]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.62753"	"1427.86805"	"1427.86843"	"-0.27"	"-0.00013"	"10/84"	"10"	"84"	"181725311.911133"	"HCD"	"MS2"	"4.070214"	"242.6"	"4.973"	"38.2803"	"10072"	"10072"	"10055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"559.6"	""	"491.0"	""	"411.4"	""	"262.8"	""	"239.4"	"319.5"	""	"410"	"38"	"33.000"	"26.000"	"0.00313151041938805"	"15"	"0"	"7.138E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLPFPGK"	"[K].lVVLPFPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"714.47235"	"1427.93743"	"1427.93903"	"-1.12"	"-0.00080"	"8/66"	"8"	"66"	"1587851.89276123"	"HCD"	"MS2"	"9.639291"	"84.0"	"100.000"	"68.4952"	"22412"	"22412"	"22394"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.2"	""	"122.4"	""	"112.0"	""	"125.8"	"0.7"	"168.1"	"181.9"	""	"136"	"39"	"28.000"	"21.000"	"0.000927916532880469"	""	"0.0001859"	"0.0003618"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLTPWVK"	"[R].lLLTPWVk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"714.47253"	"1427.93779"	"1427.93903"	"-0.87"	"-0.00062"	"7/56"	"7"	"56"	"2152024.76599121"	"HCD"	"MS2"	"23.19233"	"130.9"	"100.000"	"72.0554"	"23866"	"23866"	"23839"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.4"	""	"184.5"	""	"193.1"	""	"210.8"	"1.4"	"222.7"	"234.4"	""	"136"	"45"	"28.000"	"21.000"	"0.000216525431477376"	""	"0.0001889"	"0.0006562"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLPFPGK"	"[K].lVVLPFPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"476.65082"	"1427.93790"	"1427.93903"	"-0.79"	"-0.00038"	"10/66"	"10"	"66"	"3462991.97998047"	"HCD"	"MS2"	"25.61231"	"96.6"	"100.000"	"68.0130"	"22216"	"22216"	"22186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.6"	""	"144.9"	""	"120.8"	""	"138.1"	"2.7"	"208.4"	"184.7"	""	"136"	"45"	"28.000"	"21.000"	"0.000221568956681366"	""	"0.0001889"	"0.0004475"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLPFPGK"	"[K].lVVLPFPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"714.47260"	"1427.93791"	"1427.93903"	"-0.78"	"-0.00056"	"8/66"	"8"	"66"	"1007261.75109863"	"HCD"	"MS2"	"41.73065"	"57.5"	"100.000"	"67.8862"	"22164"	"22164"	"22138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.6"	""	"84.7"	""	"75.3"	""	"86.7"	""	"128.7"	"113.6"	""	"136"	"30"	"28.000"	"21.000"	"0.00707145712763761"	"19"	"0.0001889"	"0.000485"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLPFPGK"	"[K].lVVLPFPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"714.47260"	"1427.93791"	"1427.93903"	"-0.78"	"-0.00056"	"8/66"	"8"	"66"	"12698906.1610107"	"HCD"	"MS2"	"0"	"506.3"	"100.000"	"68.1769"	"22283"	"22283"	"22266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"608.3"	""	"730.1"	""	"644.4"	""	"709.8"	"0.5"	"1070.9"	"1044.4"	""	"136"	"47"	"28.000"	"21.000"	"0.000122887840568743"	""	"0.0002277"	"0.001358"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLPFPGK"	"[K].lVVLPFPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"714.47266"	"1427.93804"	"1427.93903"	"-0.70"	"-0.00050"	"8/66"	"8"	"66"	"1252543.14489746"	"HCD"	"MS2"	"0"	"68.2"	"100.000"	"68.0190"	"22167"	"22167"	"22138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.7"	""	"95.3"	""	"91.2"	""	"100.3"	"1.8"	"130.4"	"142.2"	""	"136"	"42"	"28.000"	"21.000"	"0.000440056978709036"	""	"0.0001859"	"0.0003155"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLTPWVK"	"[R].lLLTPWVk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"714.47266"	"1427.93804"	"1427.93903"	"-0.70"	"-0.00050"	"7/56"	"7"	"56"	"2293823.30133057"	"HCD"	"MS2"	"41.82573"	"139.1"	"100.000"	"72.1121"	"23838"	"23838"	"23809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.5"	""	"187.2"	""	"219.9"	""	"230.9"	"1.6"	"219.7"	"253.4"	""	"136"	"42"	"28.000"	"21.000"	"0.000453428603065263"	""	"0.0003839"	"0.00187"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLPFPGK"	"[K].lVVLPFPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"476.65103"	"1427.93854"	"1427.93903"	"-0.34"	"-0.00016"	"10/66"	"10"	"66"	"8268460.12200928"	"HCD"	"MS2"	"2.468238"	"231.6"	"100.000"	"68.4248"	"22332"	"22332"	"22314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.7"	""	"317.5"	""	"286.3"	""	"335.9"	""	"499.5"	"497.6"	""	"103"	"41"	"27.000"	"20.000"	"0.000394282252559297"	""	"0.0001859"	"0.0003679"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLPFPGK"	"[K].lVVLPFPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"0.7556"	"0.0000"	"1"	"1"	"1"	"476.65106"	"1427.93863"	"1427.93903"	"-0.28"	"-0.00013"	"10/66"	"10"	"66"	"8597438.67871094"	"HCD"	"MS2"	"4.317288"	"231.3"	"100.000"	"68.3062"	"22335"	"22335"	"22314"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"254.7"	""	"312.6"	"2.1"	"289.7"	""	"321.1"	""	"505.8"	"513.8"	""	"103"	"45"	"27.000"	"20.000"	"0.000162482738103793"	""	"0.0001308"	"0.0003001"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLPFPGK"	"[K].lVVLPFPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"476.65109"	"1427.93872"	"1427.93903"	"-0.21"	"-0.00010"	"10/66"	"10"	"66"	"2965507.07299805"	"HCD"	"MS2"	"34.49315"	"92.8"	"100.000"	"68.1020"	"22201"	"22201"	"22170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.3"	""	"140.1"	""	"115.4"	""	"135.0"	""	"194.0"	"182.8"	""	"103"	"47"	"27.000"	"20.000"	"0.000102048641828963"	""	"0.0001308"	"0.0002405"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLPFPGK"	"[K].lVVLPFPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"714.47321"	"1427.93913"	"1427.93903"	"0.07"	"0.00005"	"8/66"	"8"	"66"	"1351729.78887939"	"HCD"	"MS2"	"13.07602"	"75.0"	"100.000"	"68.6260"	"22414"	"22414"	"22394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.5"	""	"95.0"	""	"90.6"	""	"116.8"	""	"155.4"	"168.7"	""	"103"	"37"	"27.000"	"20.000"	"0.00105149504150481"	""	"0.0001889"	"0.0005831"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLPFPGK"	"[K].lVVLPFPGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"714.47363"	"1427.93999"	"1427.93903"	"0.67"	"0.00048"	"8/66"	"8"	"66"	"11859217.2369385"	"HCD"	"MS2"	"0.4542885"	"507.5"	"100.000"	"68.3073"	"22284"	"22284"	"22266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"571.5"	""	"720.5"	""	"663.4"	""	"706.7"	""	"1091.4"	"1073.1"	""	"103"	"46"	"27.000"	"20.000"	"0.000135771066370007"	""	"0.0001889"	"0.0009347"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQLVGQFIAR"	"[R].aPQLVGQFIAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"714.93060"	"1428.85393"	"1428.85245"	"1.04"	"0.00074"	"9/98"	"9"	"98"	"3516420.46972656"	"HCD"	"MS2"	"10.72331"	"191.0"	"100.000"	"51.9233"	"15624"	"15624"	"15602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"275.6"	""	"284.6"	""	"282.0"	""	"287.5"	"6.4"	"325.6"	"346.6"	""	"548"	"24"	"34.000"	"27.000"	"0.0976676105587909"	"16"	"0"	"7.359E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQLVGQFIAR"	"[R].aPQLVGQFIAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"714.93097"	"1428.85466"	"1428.85245"	"1.55"	"0.00111"	"10/98"	"10"	"98"	"3715687.00567627"	"HCD"	"MS2"	"0"	"194.5"	"100.000"	"52.0843"	"15740"	"15740"	"15718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.6"	""	"286.6"	""	"285.0"	""	"285.9"	"7.3"	"338.1"	"350.2"	""	"549"	"25"	"34.000"	"27.000"	"0.0940897574070006"	"19"	"0"	"5.217E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAPIWDK"	"[K].qLAPIWDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"714.93298"	"1428.85869"	"1428.86151"	"-1.97"	"-0.00141"	"7/70"	"7"	"70"	"5421620.2902832"	"HCD"	"MS2"	"13.12745"	"368.7"	"100.000"	"51.2975"	"15368"	"15368"	"15346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"563.7"	""	"474.1"	""	"488.2"	""	"627.6"	"3.6"	"655.7"	"678.6"	""	"553"	"44"	"34.000"	"27.000"	"0.00116599083198003"	"25"	"0.0001889"	"0.0007982"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAPIWDK"	"[K].qLAPIWDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"476.95804"	"1428.85956"	"1428.86151"	"-1.36"	"-0.00065"	"9/70"	"9"	"70"	"3551399.17279053"	"HCD"	"MS2"	"0"	"131.4"	"100.000"	"51.5960"	"15541"	"15541"	"15510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.4"	""	"169.2"	""	"181.4"	""	"225.2"	"1.9"	"245.6"	"242.7"	""	"554"	"26"	"34.000"	"27.000"	"0.0711999631826976"	"21"	"0.0003839"	"0.001602"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAPIWDK"	"[K].qLAPIWDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"476.95834"	"1428.86048"	"1428.86151"	"-0.72"	"-0.00034"	"9/70"	"9"	"70"	"3710460.94067383"	"HCD"	"MS2"	"11.80625"	"131.3"	"100.000"	"51.5485"	"15471"	"15471"	"15442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.0"	""	"164.6"	""	"171.8"	""	"232.1"	"0.2"	"253.6"	"247.8"	""	"563"	"30"	"34.000"	"27.000"	"0.029273752668088"	"23"	"0.0003146"	"0.001426"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVIIEILASR"	"[K].eGVIIEILASR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"714.93396"	"1428.86064"	"1428.86235"	"-1.19"	"-0.00085"	"10/98"	"10"	"98"	"808674.697143555"	"HCD"	"MS2"	"20.37955"	"49.0"	"100.000"	"71.1006"	"23476"	"23476"	"23450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.1"	""	"62.6"	""	"69.4"	""	"87.1"	""	"87.6"	"104.7"	""	"563"	"39"	"34.000"	"27.000"	"0.00336107651406693"	"19"	"0"	"2.772E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAPIWDK"	"[K].qLAPIWDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"714.93402"	"1428.86077"	"1428.86151"	"-0.52"	"-0.00037"	"12/70"	"12"	"70"	"4756078.29772949"	"HCD"	"MS2"	"18.85465"	"326.0"	"100.000"	"51.4672"	"15488"	"15488"	"15462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"507.9"	""	"418.2"	""	"422.0"	""	"571.2"	"2.6"	"587.3"	"577.5"	""	"552"	"38"	"34.000"	"27.000"	"0.00440462644637338"	""	"0.0001889"	"0.0005708"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAPIWDK"	"[K].qLAPIWDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"714.93402"	"1428.86077"	"1428.86151"	"-0.52"	"-0.00037"	"12/70"	"12"	"70"	"10527771.2433472"	"HCD"	"MS2"	"0.927519"	"533.4"	"78.937"	"51.7576"	"15607"	"15607"	"15590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"771.9"	""	"633.8"	""	"710.1"	""	"845.7"	"3.6"	"991.1"	"1101.2"	""	"552"	"38"	"34.000"	"27.000"	"0.00402632735835996"	""	"0.0001889"	"0.0009349"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAPIWDK"	"[K].qLAPIWDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"714.93414"	"1428.86101"	"1428.86151"	"-0.35"	"-0.00025"	"12/70"	"12"	"70"	"8519807.20855713"	"HCD"	"MS2"	"0.8732371"	"565.2"	"100.000"	"51.5968"	"15491"	"15491"	"15474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"818.3"	""	"664.5"	""	"776.5"	""	"926.7"	"2.1"	"1038.4"	"1131.1"	""	"544"	"38"	"34.000"	"27.000"	"0.00402317481581753"	""	"0.0001889"	"0.0007649"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVIIEILASR"	"[K].eGVIIEILASR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"714.93420"	"1428.86113"	"1428.86235"	"-0.85"	"-0.00061"	"8/98"	"8"	"98"	"868674.902709961"	"HCD"	"MS2"	"27.46171"	"49.4"	"100.000"	"71.2174"	"23472"	"23472"	"23443"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.5"	""	"68.9"	""	"72.3"	""	"81.3"	"3.0"	"76.4"	"104.2"	""	"543"	"50"	"34.000"	"27.000"	"0.00027025257081094"	"20"	"0"	"2.244E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSQILPK"	"[K].aVDSQILPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"714.94403"	"1428.88078"	"1428.88264"	"-1.30"	"-0.00093"	"12/74"	"12"	"74"	"1594470.0435791"	"HCD"	"MS2"	"0"	"120.0"	"100.000"	"39.9879"	"10770"	"10770"	"10741"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.9"	""	"167.4"	""	"153.9"	""	"191.1"	"0.6"	"226.9"	"228.6"	""	"425"	"37"	"33.000"	"26.000"	"0.003805037439825"	"23"	"0.0001889"	"0.0006062"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSQILPK"	"[K].aVDSQILPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"714.94446"	"1428.88164"	"1428.88264"	"-0.70"	"-0.00050"	"12/74"	"12"	"74"	"1492425.32427979"	"HCD"	"MS2"	"0"	"116.1"	"100.000"	"40.0903"	"10856"	"10856"	"10829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.1"	""	"162.7"	""	"158.0"	""	"187.4"	"0.5"	"225.8"	"199.8"	""	"403"	"36"	"33.000"	"26.000"	"0.00514369312486242"	"22"	"0"	"0.00016"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLDSRPGK"	"[R].vVLDSRPGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"476.96890"	"1428.89215"	"1428.89387"	"-1.20"	"-0.00057"	"11/72"	"11"	"72"	"6381704.38824463"	"HCD"	"MS2"	"0"	"367.5"	"100.000"	"30.8257"	"7030"	"7030"	"7000"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"590.2"	""	"569.3"	""	"556.7"	""	"548.1"	"0.3"	"576.3"	"633.5"	""	"325"	"21"	"32.000"	"25.000"	"0.121018945759723"	"15"	"0.0001859"	"0.0003436"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLDSRPGK"	"[R].vVLDSRPGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.96899"	"1428.89243"	"1428.89387"	"-1.01"	"-0.00048"	"9/72"	"9"	"72"	"5225871.61914063"	"HCD"	"MS2"	"8.585761"	"388.6"	"100.000"	"30.9446"	"7118"	"7118"	"7088"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"636.7"	""	"586.3"	""	"583.2"	""	"571.1"	""	"602.8"	"694.9"	""	"323"	"17"	"32.000"	"25.000"	"0.297969990197485"	"14"	"0.0001889"	"0.001028"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPMILVGNK"	"[R].vPMILVGNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61227"	"Ras-related protein Rap-2b OS=Rattus norvegicus OX=10116 GN=Rap2b PE=2 SV=1"	"P61227"	"Ras-related protein Rap-2b OS=Rattus norvegicus OX=10116 GN=Rap2b PE=2 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"714.95367"	"1428.90007"	"1428.90126"	"-0.83"	"-0.00060"	"8/68"	"8"	"68"	"2597324.04870605"	"HCD"	"MS2"	"25.08963"	"178.9"	"100.000"	"56.3319"	"17460"	"17460"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.8"	""	"239.3"	""	"228.4"	""	"281.4"	"2.6"	"329.2"	"383.1"	""	"305"	"23"	"31.000"	"24.000"	"0.0721555669916258"	"15"	"0.0001889"	"0.0004983"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALEGLK"	"[R].vLQALEGLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"476.97696"	"1428.91632"	"1428.91902"	"-1.89"	"-0.00090"	"7/76"	"7"	"76"	"998539.814331055"	"HCD"	"MS2"	"20.50051"	"50.5"	"100.000"	"66.4015"	"21567"	"21567"	"21539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.8"	""	"68.5"	""	"89.1"	""	"79.6"	""	"92.1"	"82.4"	""	"237"	"40"	"30.000"	"23.000"	"0.0011135721230191"	"23"	"0.0001308"	"0.0002672"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALEGLK"	"[R].vLQALEGLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"476.97705"	"1428.91660"	"1428.91902"	"-1.70"	"-0.00081"	"7/76"	"7"	"76"	"5850160.65698242"	"HCD"	"MS2"	"6.829405"	"179.7"	"100.000"	"66.0739"	"21433"	"21433"	"21411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.5"	""	"288.0"	""	"325.6"	""	"297.3"	"0.3"	"316.2"	"219.2"	""	"237"	"43"	"30.000"	"23.000"	"0.000544149645211689"	""	"0"	"0.0001642"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALEGLK"	"[R].vLQALEGLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.7458"	"0.0000"	"1"	"1"	"1"	"714.96252"	"1428.91777"	"1428.91902"	"-0.87"	"-0.00062"	"8/76"	"8"	"76"	"1207067.13970947"	"HCD"	"MS2"	"42.56975"	"97.7"	"100.000"	"66.4270"	"21577"	"21577"	"21555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.6"	""	"141.2"	""	"144.8"	""	"165.3"	""	"180.3"	"163.9"	""	"230"	"59"	"30.000"	"23.000"	"1.48490216465556E-05"	""	"0"	"0.0001362"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALEGLK"	"[R].vLQALEGLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"714.96259"	"1428.91789"	"1428.91902"	"-0.79"	"-0.00056"	"8/76"	"8"	"76"	"11329097.5345459"	"HCD"	"MS2"	"39.70382"	"663.9"	"100.000"	"66.1037"	"21445"	"21445"	"21427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"852.3"	""	"985.9"	""	"1135.7"	""	"1164.0"	"2.3"	"1230.7"	"910.4"	""	"232"	"60"	"30.000"	"23.000"	"1.10779139978486E-05"	""	"0.0001308"	"0.0002934"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALEGLK"	"[R].vLQALEGLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"714.96277"	"1428.91826"	"1428.91902"	"-0.53"	"-0.00038"	"8/76"	"8"	"76"	"10741675.6132202"	"HCD"	"MS2"	"38.67022"	"492.9"	"72.591"	"66.1691"	"21419"	"21419"	"21401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"633.2"	""	"724.3"	""	"798.6"	""	"884.0"	""	"920.3"	"709.3"	""	"231"	"60"	"30.000"	"23.000"	"1.12870899020396E-05"	""	"0.0001308"	"0.0002646"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALEGLK"	"[R].vLQALEGLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"714.96283"	"1428.91838"	"1428.91902"	"-0.45"	"-0.00032"	"8/76"	"8"	"76"	"1195667.84509277"	"HCD"	"MS2"	"31.53165"	"97.6"	"100.000"	"66.4924"	"21551"	"21551"	"21529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.6"	""	"121.6"	""	"157.3"	""	"157.9"	""	"178.1"	"170.1"	""	"231"	"59"	"30.000"	"23.000"	"1.41769231198796E-05"	""	"0"	"7.168E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALEGLK"	"[R].vLQALEGLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"3"	"3"	"0.7209"	"0.0000"	"1"	"1"	"1"	"476.97794"	"1428.91925"	"1428.91902"	"0.16"	"0.00008"	"7/76"	"7"	"76"	"5421129.824646"	"HCD"	"MS2"	"4.910913"	"176.6"	"100.000"	"66.1439"	"21409"	"21409"	"21385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"248.2"	"3.3"	"265.0"	""	"328.4"	""	"305.3"	""	"282.4"	"237.3"	""	"231"	"43"	"30.000"	"23.000"	"0.000542727695439024"	""	"0"	"0.0001284"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAAAGVK"	"[K].kPAAAGVk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZBN0"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1"	"D3ZBN0"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.98795"	"1428.94928"	"1428.95055"	"-0.88"	"-0.00042"	"11/72"	"11"	"72"	"11666237.3322144"	"HCD"	"MS2"	"35.94942"	"711.4"	"100.000"	"26.7497"	"5409"	"5409"	"5384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1082.5"	""	"1301.8"	""	"1517.5"	""	"821.5"	""	"1226.2"	"766.3"	""	"147"	"15"	"28.000"	"21.000"	"0.236748556159332"	"13"	"0.0001889"	"0.000639"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFQEYLGK"	"[R].sFQEYLGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"715.40820"	"1429.80913"	"1429.80914"	"-0.01"	"0.00000"	"7/72"	"7"	"72"	"1751418.44989014"	"HCD"	"MS2"	"0"	"168.3"	"100.000"	"46.6518"	"13478"	"13478"	"13448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.5"	""	"238.6"	""	"239.5"	""	"263.7"	"2.4"	"294.4"	"301.8"	""	"769"	"41"	"35.000"	"28.000"	"0.00326509892651462"	"26"	"0.0001859"	"0.0003316"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFQEYLGK"	"[R].sFQEYLGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"715.40863"	"1429.80998"	"1429.80914"	"0.59"	"0.00042"	"12/72"	"12"	"72"	"1677954.05328369"	"HCD"	"MS2"	"13.04589"	"150.3"	"100.000"	"46.9504"	"13648"	"13648"	"13618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.4"	""	"201.0"	""	"218.9"	""	"226.8"	""	"259.9"	"293.1"	""	"765"	"34"	"35.000"	"28.000"	"0.0164676428513079"	"20"	"0.0001889"	"0.0004422"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVMSYSAK"	"[R].vSVMSYSAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"715.40955"	"1429.81182"	"1429.81251"	"-0.48"	"-0.00035"	"14/74"	"14"	"74"	"1205837.19519043"	"HCD"	"MS2"	"0"	"118.0"	"100.000"	"39.2760"	"10524"	"10524"	"10494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.3"	""	"176.0"	""	"171.9"	""	"172.0"	"1.0"	"201.9"	"222.8"	""	"767"	"48"	"35.000"	"28.000"	"0.000559455268815596"	"28"	"0"	"0.0001192"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAYNISLK"	"[K].yAYNISLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64350"	"Translation initiation factor eIF-2B subunit epsilon OS=Rattus norvegicus OX=10116 GN=Eif2b5 PE=1 SV=2"	"Q64350"	"Translation initiation factor eIF-2B subunit epsilon OS=Rattus norvegicus OX=10116 GN=Eif2b5 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"715.42554"	"1429.84380"	"1429.84552"	"-1.21"	"-0.00086"	"7/64"	"7"	"64"	"1502318.02911377"	"HCD"	"MS2"	"0"	"135.5"	"100.000"	"45.7661"	"13115"	"13115"	"13091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.5"	""	"193.7"	""	"214.2"	""	"205.9"	""	"236.7"	"233.9"	""	"720"	"25"	"35.000"	"28.000"	"0.110484791582082"	"21"	"0.0001889"	"0.0005187"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLALDHFK"	"[K].qLALDHFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"477.28995"	"1429.85529"	"1429.85676"	"-1.03"	"-0.00049"	"11/70"	"11"	"70"	"19948007.3377686"	"HCD"	"MS2"	"18.31535"	"377.5"	"47.089"	"38.7590"	"10268"	"10268"	"10246"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.9"	""	"439.7"	""	"484.4"	""	"626.6"	""	"811.4"	"762.2"	""	"645"	"33"	"35.000"	"28.000"	"0.0148432744979987"	"23"	"0.0001308"	"0.000267"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLALDHFK"	"[K].qLALDHFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"477.29001"	"1429.85547"	"1429.85676"	"-0.90"	"-0.00043"	"12/70"	"12"	"70"	"21272215.1925659"	"HCD"	"MS2"	"24.42467"	"604.1"	"69.931"	"38.8265"	"10339"	"10339"	"10318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"748.3"	""	"688.4"	""	"775.7"	""	"992.2"	""	"1303.2"	"1230.6"	""	"653"	"42"	"35.000"	"28.000"	"0.00210806105779815"	"27"	"0.0001308"	"0.0002464"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].ADGLAIIGVLMk.[V]"	"K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"715.43585"	"1429.86443"	"1429.86499"	"-0.39"	"-0.00028"	"8/88"	"8"	"88"	"684646.946350098"	"HCD"	"MS2"	"16.07875"	"33.6"	"100.000"	"77.8149"	"26205"	"26205"	"26181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.6"	""	"54.3"	""	"56.1"	""	"53.4"	""	"44.5"	"59.7"	""	"591"	"54"	"34.000"	"27.000"	"0.000110549678834392"	"27"	"0.0001889"	"0.0004856"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].ADGLAIIGVLMk.[V]"	"K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7719"	"0.0000"	"1"	"1"	"1"	"715.43616"	"1429.86504"	"1429.86499"	"0.03"	"0.00002"	"8/88"	"8"	"88"	"593675.623779297"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"77.8254"	"26158"	"26158"	"26137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.3"	""	"47.2"	""	"46.6"	""	"44.3"	"0.6"	"43.9"	"48.5"	""	"582"	"57"	"34.000"	"27.000"	"5.67404778529591E-05"	""	"7.476E-05"	"0.0001984"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILNQIDK"	"[R].qILNQIDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"477.29663"	"1429.87534"	"1429.87789"	"-1.78"	"-0.00085"	"5/70"	"5"	"70"	"12910845.3001709"	"HCD"	"MS2"	"23.85816"	"475.0"	"100.000"	"40.8411"	"11119"	"11119"	"11093"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"629.1"	""	"571.3"	""	"597.4"	""	"843.1"	"5.6"	"935.4"	"924.0"	""	"507"	"16"	"34.000"	"27.000"	"0.687033578684328"	"19"	"0.003197"	"0.06465"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILNQIDK"	"[R].qILNQIDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"715.44232"	"1429.87737"	"1429.87789"	"-0.36"	"-0.00026"	"14/70"	"14"	"70"	"13871444.7872925"	"HCD"	"MS2"	"8.458837"	"947.3"	"100.000"	"40.7266"	"11072"	"11072"	"11045"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1584.5"	""	"1182.6"	""	"1250.5"	""	"1688.9"	"0.3"	"1564.3"	"1691.3"	""	"500"	"44"	"33.000"	"26.000"	"0.000911884867314019"	""	"0.0001889"	"0.0008635"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILNQIDK"	"[R].qILNQIDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"P24090"	"Alpha-2-HS-glycoprotein OS=Rattus norvegicus OX=10116 GN=Ahsg PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"715.44281"	"1429.87834"	"1429.87789"	"0.32"	"0.00023"	"14/70"	"14"	"70"	"16278103.2277222"	"HCD"	"MS2"	"0"	"1180.9"	"100.000"	"40.9168"	"11194"	"11194"	"11165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1929.0"	""	"1484.2"	""	"1516.0"	""	"2137.1"	"8.1"	"1942.4"	"2157.5"	""	"500"	"44"	"33.000"	"26.000"	"0.000920322434106327"	""	"0.0001889"	"0.001102"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGWIQNK"	"[R].lLGWIQNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"477.30212"	"1429.89182"	"1429.89314"	"-0.92"	"-0.00044"	"9/62"	"9"	"62"	"1087710.42224121"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"63.6529"	"20392"	"20392"	"20361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.4"	""	"65.7"	""	"80.5"	""	"76.8"	""	"88.9"	"92.4"	""	"419"	"26"	"33.000"	"26.000"	"0.0485494179168396"	"21"	"0.000523"	"0.002792"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGWIQNK"	"[R].lLGWIQNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"477.30222"	"1429.89209"	"1429.89314"	"-0.73"	"-0.00035"	"8/62"	"8"	"62"	"1450647.89068604"	"HCD"	"MS2"	"7.131823"	"60.5"	"100.000"	"63.6927"	"20461"	"20461"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.5"	""	"81.7"	""	"92.1"	""	"88.8"	"0.5"	"105.8"	"124.6"	""	"421"	"22"	"33.000"	"26.000"	"0.141988149830412"	"18"	"0.0008731"	"0.009566"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGWIQNK"	"[R].lLGWIQNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"477.30237"	"1429.89255"	"1429.89314"	"-0.41"	"-0.00020"	"6/62"	"6"	"62"	"7475328.72912598"	"HCD"	"MS2"	"15.11623"	"230.9"	"100.000"	"63.2907"	"20244"	"20244"	"20217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"312.8"	""	"340.4"	""	"360.3"	""	"372.0"	""	"383.0"	"418.0"	""	"415"	"29"	"33.000"	"26.000"	"0.0236057661808362"	"18"	"0.0008731"	"0.008918"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGWIQNK"	"[R].lLGWIQNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"477.30249"	"1429.89292"	"1429.89314"	"-0.16"	"-0.00007"	"6/62"	"6"	"62"	"8719742.50073242"	"HCD"	"MS2"	"5.235255"	"272.5"	"100.000"	"63.3767"	"20332"	"20332"	"20307"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"380.1"	""	"375.2"	""	"428.1"	""	"428.5"	""	"466.4"	"502.4"	""	"413"	"32"	"33.000"	"26.000"	"0.0126159528143001"	"20"	"0.0003839"	"0.001575"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGWIQNK"	"[R].lLGWIQNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"715.45020"	"1429.89311"	"1429.89314"	"-0.02"	"-0.00001"	"6/62"	"6"	"62"	"6699345.81951904"	"HCD"	"MS2"	"0"	"421.7"	"100.000"	"63.3283"	"20312"	"20312"	"20291"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"620.9"	""	"589.7"	""	"664.0"	""	"651.3"	"1.1"	"690.8"	"771.9"	""	"413"	"29"	"33.000"	"26.000"	"0.025463614806177"	"20"	"0.0002277"	"0.001249"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGWIQNK"	"[R].lLGWIQNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"715.45172"	"1429.89617"	"1429.89314"	"2.12"	"0.00151"	"6/62"	"6"	"62"	"6149700.37237549"	"HCD"	"MS2"	"11.58699"	"429.1"	"100.000"	"63.2468"	"20226"	"20226"	"20201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"584.6"	""	"592.9"	""	"678.4"	""	"649.7"	"2.5"	"742.3"	"812.5"	""	"393"	"30"	"32.000"	"25.000"	"0.0175534527553592"	"22"	"0.0001889"	"0.001078"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFSPVAPK"	"[R].iIFSPVAPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P56558"	"UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ogt PE=1 SV=1"	"P56558"	"UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ogt PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"715.46179"	"1429.91631"	"1429.91829"	"-1.39"	"-0.00099"	"8/64"	"8"	"64"	"1558053.8807373"	"HCD"	"MS2"	"72.73773"	"139.3"	"100.000"	"54.9392"	"16836"	"16836"	"16812"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.5"	""	"171.0"	""	"184.9"	""	"212.9"	""	"249.8"	"260.0"	""	"315"	"10"	"31.000"	"24.000"	"1.53207687744872"	"19"	"0.00274"	"0.04419"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKAEPAK"	"[K].vkAEPAk.[I]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"477.31567"	"1429.93247"	"1429.93456"	"-1.46"	"-0.00070"	"6/58"	"6"	"58"	"10676960.4351196"	"HCD"	"MS2"	"10.86164"	"790.6"	"100.000"	"26.3303"	"5237"	"5237"	"5218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1740.5"	""	"1489.1"	""	"1429.7"	""	"841.1"	"9.7"	"918.4"	"1009.8"	""	"228"	"4"	"30.000"	"23.000"	"4.73047608603174"	"13"	"0.0006037"	"0.003945"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDHYAIIK"	"[K].lDHYAIIk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"0"	"3"	"3"	"0.7073"	"0.0000"	"1"	"1"	"1"	"477.62970"	"1430.87455"	"1430.87716"	"-1.82"	"-0.00087"	"5/56"	"5"	"56"	"12449560.8562622"	"HCD"	"MS2"	"40.85007"	"398.6"	"100.000"	"39.9637"	"10804"	"10804"	"10781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"534.9"	""	"568.4"	""	"652.7"	""	"727.3"	""	"741.8"	"546.2"	""	"592"	"41"	"34.000"	"27.000"	"0.00244507233074845"	"27"	"0.0001889"	"0.0007027"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDHYAIIK"	"[K].lDHYAIIk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"477.63004"	"1430.87555"	"1430.87716"	"-1.12"	"-0.00053"	"5/56"	"5"	"56"	"11147111.18396"	"HCD"	"MS2"	"0"	"398.7"	"100.000"	"39.8563"	"10719"	"10719"	"10693"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"467.7"	""	"557.4"	""	"634.0"	""	"756.0"	"14.1"	"768.2"	"578.5"	""	"574"	"30"	"34.000"	"27.000"	"0.0304005819125882"	"19"	"0.0001889"	"0.0008486"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQELLSK"	"[R].aALQELLSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"477.63721"	"1430.89707"	"1430.89829"	"-0.85"	"-0.00041"	"10/80"	"10"	"80"	"7509300.89788818"	"HCD"	"MS2"	"2.69636"	"230.0"	"100.000"	"59.5770"	"18780"	"18780"	"18757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"331.6"	""	"338.0"	""	"396.8"	""	"398.5"	""	"399.8"	"311.4"	""	"501"	"36"	"33.000"	"26.000"	"0.00697923352741759"	"22"	"0.0001889"	"0.0009041"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].qTALAELVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"715.95245"	"1430.89763"	"1430.89829"	"-0.46"	"-0.00033"	"8/88"	"8"	"88"	"2249608.10906982"	"HCD"	"MS2"	"0"	"183.7"	"100.000"	"49.1203"	"14535"	"14535"	"14511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.5"	""	"190.9"	""	"197.5"	""	"270.8"	"1.7"	"516.0"	"386.9"	""	"501"	"30"	"33.000"	"26.000"	"0.0256334894566329"	"26"	"0.0001308"	"0.0002601"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQELLSK"	"[R].aALQELLSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"715.95258"	"1430.89787"	"1430.89829"	"-0.29"	"-0.00021"	"16/80"	"16"	"80"	"6799782.39910889"	"HCD"	"MS2"	"38.33526"	"427.7"	"100.000"	"59.2891"	"18609"	"18609"	"18585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"629.9"	""	"639.5"	""	"719.7"	""	"729.9"	""	"747.2"	"578.2"	""	"501"	"59"	"33.000"	"26.000"	"3.2048501669146E-05"	""	"0.0001308"	"0.000219"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQELLSK"	"[R].aALQELLSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"477.63748"	"1430.89789"	"1430.89829"	"-0.28"	"-0.00013"	"10/80"	"10"	"80"	"7007224.45550537"	"HCD"	"MS2"	"4.136528"	"230.2"	"100.000"	"59.4411"	"18671"	"18671"	"18649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"329.2"	""	"373.3"	""	"382.0"	""	"401.7"	"0.5"	"382.3"	"306.6"	""	"501"	"44"	"33.000"	"26.000"	"0.000976804676624741"	"25"	"0.0001889"	"0.0006329"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].qTALAELVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.5682"	"0.0000"	"1"	"1"	"1"	"477.63757"	"1430.89817"	"1430.89829"	"-0.08"	"-0.00004"	"7/88"	"7"	"88"	"68612351.612793"	"HCD"	"MS2"	"5.281264"	"316.8"	"15.312"	"47.6372"	"13881"	"13881"	"13864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"469.4"	""	"435.2"	""	"400.1"	""	"489.3"	""	"642.0"	"569.3"	""	"500"	"44"	"33.000"	"26.000"	"0.00102079846583173"	""	"0"	"0.0001833"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].qTALAELVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.5510"	"0.0000"	"1"	"1"	"1"	"477.63757"	"1430.89817"	"1430.89829"	"-0.08"	"-0.00004"	"7/88"	"7"	"88"	"36724952.3598633"	"HCD"	"MS2"	"24.83349"	"1156.9"	"100.000"	"47.3361"	"13757"	"13757"	"13736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1813.7"	""	"1672.7"	""	"1482.2"	""	"1806.9"	"0.8"	"2171.8"	"2009.3"	""	"500"	"49"	"33.000"	"26.000"	"0.000295080158912932"	""	"0"	"0.0001569"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].qTALAELVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.5532"	"0.0000"	"1"	"1"	"1"	"477.63760"	"1430.89826"	"1430.89829"	"-0.02"	"-0.00001"	"7/88"	"7"	"88"	"45038091.6530762"	"HCD"	"MS2"	"22.50556"	"1533.7"	"100.000"	"47.6340"	"13927"	"13927"	"13906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2419.4"	""	"2249.5"	""	"1910.1"	""	"2390.3"	"0.5"	"2934.2"	"2623.9"	""	"500"	"47"	"33.000"	"26.000"	"0.000473085904661244"	""	"0"	"0.0001485"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].qTALAELVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"715.95294"	"1430.89861"	"1430.89829"	"0.22"	"0.00016"	"8/88"	"8"	"88"	"128442723.092285"	"HCD"	"MS2"	"2.353748"	"1276.2"	"14.980"	"47.3638"	"13769"	"13769"	"13752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1998.7"	""	"1863.2"	""	"1578.7"	""	"2014.1"	"19.2"	"2401.5"	"2212.7"	""	"500"	"64"	"33.000"	"26.000"	"1.05667153566401E-05"	""	"0.0001889"	"0.0006593"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].qTALAELVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.5652"	"0.0000"	"1"	"1"	"1"	"477.63773"	"1430.89862"	"1430.89829"	"0.24"	"0.00011"	"7/88"	"7"	"88"	"52643130.7648926"	"HCD"	"MS2"	"4.582065"	"277.0"	"17.552"	"47.9399"	"14052"	"14052"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.4"	""	"402.6"	""	"350.8"	""	"410.6"	""	"523.8"	"516.8"	""	"500"	"46"	"33.000"	"26.000"	"0.000691735411352878"	""	"0"	"0.0001529"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].qTALAELVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"715.95300"	"1430.89873"	"1430.89829"	"0.31"	"0.00022"	"8/88"	"8"	"88"	"85815016.439209"	"HCD"	"MS2"	"4.019016"	"1484.4"	"27.818"	"47.6227"	"13923"	"13923"	"13906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2451.1"	""	"2188.3"	""	"1896.6"	""	"2286.8"	"11.1"	"2698.3"	"2519.1"	""	"500"	"66"	"33.000"	"26.000"	"5.70085518000104E-06"	""	"0.0001889"	"0.0004684"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQELLSK"	"[R].aALQELLSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.7869"	"0.0000"	"1"	"1"	"1"	"715.95325"	"1430.89922"	"1430.89829"	"0.65"	"0.00047"	"16/80"	"16"	"80"	"6364359.19696045"	"HCD"	"MS2"	"34.14199"	"393.5"	"100.000"	"59.4292"	"18720"	"18720"	"18693"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"596.6"	""	"623.9"	""	"620.2"	""	"657.4"	"4.1"	"695.8"	"522.3"	""	"500"	"61"	"33.000"	"26.000"	"1.88773056916358E-05"	""	"0"	"0.0001565"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].qTALAELVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"715.95337"	"1430.89946"	"1430.89829"	"0.82"	"0.00059"	"8/88"	"8"	"88"	"91486385.1552734"	"HCD"	"MS2"	"0"	"471.1"	"7.969"	"47.9355"	"14051"	"14051"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"729.2"	""	"662.4"	""	"595.5"	""	"668.0"	"4.4"	"920.7"	"885.6"	""	"500"	"64"	"33.000"	"26.000"	"1.0326187549754E-05"	""	"0.0001889"	"0.000982"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPLPLIEK"	"[K].yPLPLIEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AY12"	"NADH-cytochrome b5 reductase 2 OS=Rattus norvegicus OX=10116 GN=Cyb5r2 PE=2 SV=1"	"Q6AY12"	"NADH-cytochrome b5 reductase 2 OS=Rattus norvegicus OX=10116 GN=Cyb5r2 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"715.95367"	"1430.90007"	"1430.90231"	"-1.56"	"-0.00112"	"7/56"	"7"	"56"	"1176947.78594971"	"HCD"	"MS2"	"0"	"94.1"	"100.000"	"58.9942"	"18543"	"18543"	"18517"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.6"	""	"105.5"	""	"127.2"	""	"158.7"	"1.5"	"184.1"	"193.3"	""	"497"	"40"	"33.000"	"26.000"	"0.00262619151039594"	"23"	"0.000523"	"0.003189"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].qTALAELVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7313"	"0.0000"	"1"	"1"	"1"	"715.95386"	"1430.90044"	"1430.89829"	"1.50"	"0.00108"	"8/88"	"8"	"88"	"67416741.6479492"	"HCD"	"MS2"	"0"	"574.5"	"13.087"	"47.6762"	"13897"	"13897"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"888.3"	""	"797.0"	""	"719.6"	""	"822.0"	""	"1103.7"	"1115.8"	""	"497"	"67"	"33.000"	"26.000"	"5.52492507826873E-06"	""	"0.0001889"	"0.0008534"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQELLSK"	"[R].aALQELLSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"715.95441"	"1430.90154"	"1430.89829"	"2.27"	"0.00163"	"8/80"	"8"	"80"	"3837696.1182251"	"HCD"	"MS2"	"20.97894"	"232.8"	"100.000"	"59.7608"	"18855"	"18855"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.8"	""	"341.6"	""	"372.6"	""	"378.1"	"2.9"	"400.6"	"364.5"	""	"500"	"48"	"33.000"	"26.000"	"0.000378390312109052"	"19"	"0.0001308"	"0.0002678"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQELLSK"	"[R].aALQELLSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"715.95483"	"1430.90239"	"1430.89829"	"2.87"	"0.00205"	"16/80"	"16"	"80"	"4118603.31414795"	"HCD"	"MS2"	"11.21291"	"262.5"	"100.000"	"59.5883"	"18731"	"18731"	"18713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.4"	""	"378.4"	""	"429.6"	""	"445.5"	"0.1"	"455.9"	"403.0"	""	"409"	"60"	"33.000"	"26.000"	"1.86506216648284E-05"	"25"	"0.0001308"	"0.0002071"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPLPLIEK"	"[K].yPLPLIEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AY12"	"NADH-cytochrome b5 reductase 2 OS=Rattus norvegicus OX=10116 GN=Cyb5r2 PE=2 SV=1"	"Q6AY12"	"NADH-cytochrome b5 reductase 2 OS=Rattus norvegicus OX=10116 GN=Cyb5r2 PE=2 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"715.95496"	"1430.90264"	"1430.90231"	"0.23"	"0.00016"	"6/56"	"6"	"56"	"1216702.77703857"	"HCD"	"MS2"	"7.473252"	"97.1"	"100.000"	"58.8037"	"18416"	"18416"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.6"	""	"110.3"	""	"145.0"	""	"171.5"	"1.0"	"179.8"	"180.6"	""	"407"	"43"	"33.000"	"26.000"	"0.00101522993198112"	"25"	"0.0001308"	"0.0002627"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTGAAPAK"	"[R].kTGAAPAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"477.64737"	"1430.92755"	"1430.92981"	"-1.58"	"-0.00075"	"11/70"	"11"	"70"	"15438204.0767212"	"HCD"	"MS2"	"15.19654"	"1008.3"	"100.000"	"24.2655"	"4400"	"4400"	"4390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1368.9"	""	"1242.5"	""	"1307.5"	""	"1626.9"	""	"1998.0"	"2025.6"	""	"285"	"13"	"31.000"	"24.000"	"0.669599104762432"	"13"	"0.0001889"	"0.0009481"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTGAAPAK"	"[R].kTGAAPAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"1"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"715.96747"	"1430.92766"	"1430.92981"	"-1.50"	"-0.00108"	"7/70"	"7"	"70"	"404074.576660156"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"24.2791"	"4405"	"4405"	"4390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.4"	""	"36.9"	""	"41.7"	""	"54.6"	""	"66.3"	"67.6"	""	"285"	"24"	"31.000"	"24.000"	"0.0596780830293033"	"24"	"0.0005564"	"0.003392"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTGAAPAK"	"[R].kTGAAPAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"477.64780"	"1430.92884"	"1430.92981"	"-0.68"	"-0.00032"	"9/70"	"9"	"70"	"5110164.02233887"	"HCD"	"MS2"	"14.77543"	"394.6"	"100.000"	"24.4096"	"4492"	"4492"	"4472"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"523.7"	""	"501.6"	""	"532.6"	""	"605.9"	""	"784.3"	"799.7"	""	"277"	"11"	"31.000"	"24.000"	"1.10522264186615"	"13"	"0.0002277"	"0.001314"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTTGDAMSK"	"[R].fTTGDAmSk.[R]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.38153"	"1431.75578"	"1431.75539"	"0.28"	"0.00020"	"5/76"	"5"	"76"	"242903.397399902"	"HCD"	"MS2"	"0"	"24.5"	"100.000"	"31.7940"	"7424"	"7424"	"7398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.3"	""	"33.8"	""	"33.1"	""	"43.9"	""	"46.9"	"42.6"	""	"842"	"9"	"36.000"	"29.000"	"5.65304048639041"	"13"	"0.008648"	"0.3763"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYAGWADK"	"[R].yYAGWADk.[IY]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q63639; P11884"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q63639; P11884"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"716.38599"	"1431.76470"	"1431.76727"	"-1.80"	"-0.00129"	"7/56"	"7"	"56"	"11054825.5929565"	"HCD"	"MS2"	"0"	"872.8"	"100.000"	"42.1064"	"11634"	"11634"	"11615"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1252.6"	""	"1243.5"	""	"1337.0"	""	"1344.2"	""	"1466.4"	"1621.6"	""	"859"	"40"	"36.000"	"29.000"	"0.00410169315696206"	"28"	"0.0002277"	"0.00127"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYAGWADK"	"[R].yYAGWADk.[IY]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q63639; P11884"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q63639; P11884"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"716.38666"	"1431.76604"	"1431.76727"	"-0.86"	"-0.00062"	"7/56"	"7"	"56"	"7841875.67663574"	"HCD"	"MS2"	"0"	"643.3"	"100.000"	"42.3175"	"11765"	"11765"	"11742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"907.5"	""	"941.5"	""	"966.1"	""	"967.9"	"0.7"	"1118.3"	"1188.8"	""	"865"	"41"	"36.000"	"29.000"	"0.00306892384644166"	"29"	"0.0001889"	"0.0009676"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYAGWADK"	"[R].yYAGWADk.[IY]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q63639; P11884"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q63639; P11884"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"716.38715"	"1431.76702"	"1431.76727"	"-0.18"	"-0.00013"	"7/56"	"7"	"56"	"4201423.90911865"	"HCD"	"MS2"	"2.681644"	"382.7"	"100.000"	"42.6368"	"11895"	"11895"	"11875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"544.3"	""	"544.4"	""	"594.0"	""	"534.3"	"3.2"	"668.3"	"735.4"	""	"865"	"42"	"36.000"	"29.000"	"0.00293755571106932"	"24"	"0.0001889"	"0.0006117"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNDTFWK"	"[K].yNDTFWk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"716.38721"	"1431.76714"	"1431.76727"	"-0.09"	"-0.00007"	"6/60"	"6"	"60"	"12819335.6047974"	"HCD"	"MS2"	"14.29269"	"1088.7"	"100.000"	"47.2645"	"13728"	"13728"	"13704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1631.0"	""	"1538.9"	""	"1462.2"	""	"1773.5"	""	"1947.4"	"1966.3"	""	"863"	"16"	"36.000"	"29.000"	"1.10657486175739"	"20"	"0.00103"	"0.01284"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYAGWADK"	"[R].yYAGWADk.[IY]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q63639; P11884"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q63639; P11884"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"716.38757"	"1431.76787"	"1431.76727"	"0.42"	"0.00030"	"7/56"	"7"	"56"	"3346135.33947754"	"HCD"	"MS2"	"5.625868"	"312.3"	"100.000"	"42.4100"	"11758"	"11758"	"11740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"451.5"	""	"454.7"	""	"494.0"	""	"450.3"	""	"528.0"	"578.5"	""	"844"	"40"	"36.000"	"29.000"	"0.00430836462124641"	"26"	"0.0001889"	"0.0006044"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNDTFWK"	"[K].yNDTFWk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"716.38776"	"1431.76824"	"1431.76727"	"0.67"	"0.00048"	"5/60"	"5"	"60"	"10557600.4839478"	"HCD"	"MS2"	"16.42891"	"894.0"	"100.000"	"47.5258"	"13883"	"13883"	"13858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1326.1"	""	"1264.3"	""	"1215.6"	""	"1477.5"	"3.7"	"1639.3"	"1539.7"	""	"856"	"31"	"36.000"	"29.000"	"0.0336855597989503"	"23"	"0.0008125"	"0.007721"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIGLQMGTNR"	"[K].nVIGLQMGTNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"716.40002"	"1431.79277"	"1431.79395"	"-0.82"	"-0.00059"	"10/100"	"10"	"100"	"3072159.0614624"	"HCD"	"MS2"	"0"	"183.6"	"100.000"	"39.4029"	"10533"	"10533"	"10502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"219.0"	""	"188.1"	""	"178.7"	""	"322.2"	"4.0"	"423.0"	"412.2"	""	"884"	"52"	"36.000"	"29.000"	"0.000306494206259323"	""	"0"	"2.072E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIGLQMGTNR"	"[K].nVIGLQMGTNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"477.93600"	"1431.79346"	"1431.79395"	"-0.34"	"-0.00016"	"8/100"	"8"	"100"	"5028586.46795654"	"HCD"	"MS2"	"63.17664"	"251.6"	"100.000"	"39.5444"	"10634"	"10634"	"10606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.4"	""	"344.2"	""	"379.6"	""	"354.7"	"9.0"	"411.2"	"468.3"	""	"891"	"17"	"36.000"	"29.000"	"0.818177831961689"	"20"	"0.000494"	"0.002646"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIGLQMGTNR"	"[K].nVIGLQMGTNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"716.40063"	"1431.79399"	"1431.79395"	"0.03"	"0.00002"	"8/100"	"8"	"100"	"3206536.31054688"	"HCD"	"MS2"	"0"	"200.0"	"100.000"	"39.5398"	"10632"	"10632"	"10606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.4"	""	"187.9"	""	"212.9"	""	"340.6"	"3.6"	"462.3"	"447.2"	""	"892"	"53"	"36.000"	"29.000"	"0.000246226537919218"	""	"0"	"0.0001499"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"716.40308"	"1431.79888"	"1431.79963"	"-0.53"	"-0.00038"	"7/68"	"7"	"68"	"483027.677734375"	"HCD"	"MS2"	"0"	"46.9"	"100.000"	"31.5278"	"7315"	"7315"	"7286"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.5"	""	"59.7"	""	"56.5"	""	"74.9"	"1.0"	"95.9"	"92.5"	""	"958"	"33"	"36.000"	"29.000"	"0.026081677071152"	"20"	"0.0001308"	"0.0002909"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"477.93784"	"1431.79895"	"1431.79963"	"-0.48"	"-0.00023"	"6/68"	"6"	"68"	"47803634.9017334"	"HCD"	"MS2"	"37.01751"	"1099.5"	"57.913"	"31.3948"	"7260"	"7260"	"7238"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1646.4"	""	"1373.9"	""	"1271.5"	""	"1776.5"	"6.1"	"2290.7"	"2066.0"	""	"949"	"29"	"36.000"	"29.000"	"0.0600117396875061"	"24"	"0"	"0.0001211"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"477.93793"	"1431.79923"	"1431.79963"	"-0.28"	"-0.00014"	"7/68"	"7"	"68"	"64830712.2457275"	"HCD"	"MS2"	"18.05468"	"917.8"	"38.274"	"31.5344"	"7359"	"7359"	"7341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1381.4"	""	"1108.6"	""	"1064.7"	""	"1483.9"	"1.2"	"1936.5"	"1732.3"	""	"950"	"38"	"36.000"	"29.000"	"0.00735687893983428"	"26"	"0.0001308"	"0.0002223"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"716.40375"	"1431.80022"	"1431.79963"	"0.41"	"0.00029"	"7/68"	"7"	"68"	"1218577.31054688"	"HCD"	"MS2"	"0"	"103.2"	"100.000"	"31.6033"	"7388"	"7388"	"7357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.7"	""	"123.0"	""	"119.4"	""	"145.4"	""	"242.0"	"197.8"	""	"947"	"38"	"36.000"	"29.000"	"0.00689159874655561"	"19"	"7.476E-05"	"0.0001921"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDLIAELLR"	"[K].yPDLIAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"477.95093"	"1431.83823"	"1431.84088"	"-1.85"	"-0.00088"	"8/80"	"8"	"80"	"383444.562866211"	"HCD"	"MS2"	"18.04927"	"7.7"	"100.000"	"84.2459"	"28828"	"28828"	"28801"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.8"	""	"10.2"	""	"9.5"	""	"12.1"	""	"20.1"	"18.0"	""	"871"	"13"	"36.000"	"29.000"	"2.15768558095486"	"14"	"0.0008731"	"0.009234"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDLIAELLR"	"[K].yPDLIAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"716.42310"	"1431.83891"	"1431.84088"	"-1.37"	"-0.00098"	"14/80"	"14"	"80"	"1112402.51629639"	"HCD"	"MS2"	"3.777657"	"44.3"	"100.000"	"84.0638"	"28754"	"28754"	"28738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.2"	""	"29.8"	""	"37.1"	""	"93.6"	""	"126.8"	"111.8"	""	"870"	"32"	"36.000"	"29.000"	"0.0266986472246686"	"18"	"0"	"6.127E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDLIAELLR"	"[K].yPDLIAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"477.95123"	"1431.83915"	"1431.84088"	"-1.21"	"-0.00058"	"8/80"	"8"	"80"	"426121.628112793"	"HCD"	"MS2"	"9.508005"	"7.7"	"100.000"	"84.5137"	"28886"	"28886"	"28860"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.6"	""	"6.5"	""	"8.5"	""	"14.6"	""	"19.7"	"17.2"	""	"865"	"26"	"36.000"	"29.000"	"0.111940208580371"	"22"	"0.0002277"	"0.001205"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDLIAELLR"	"[K].yPDLIAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"477.95129"	"1431.83933"	"1431.84088"	"-1.08"	"-0.00052"	"9/80"	"9"	"80"	"354370.692687988"	"HCD"	"MS2"	"55.4036"	"8.0"	"100.000"	"84.1842"	"28752"	"28752"	"28724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.5"	""	"9.1"	""	"9.4"	""	"13.5"	""	"17.3"	"17.7"	""	"863"	"20"	"36.000"	"29.000"	"0.484150963031297"	"17"	"0.0006037"	"0.003875"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDLIAELLR"	"[K].yPDLIAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"716.42346"	"1431.83965"	"1431.84088"	"-0.86"	"-0.00062"	"9/80"	"9"	"80"	"5649494.04168701"	"HCD"	"MS2"	"8.320628"	"207.3"	"100.000"	"84.3774"	"28882"	"28882"	"28865"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.0"	""	"127.7"	""	"124.6"	""	"464.8"	"0.0"	"586.5"	"561.5"	""	"867"	"43"	"36.000"	"29.000"	"0.00220287118350003"	"20"	"0"	"9.79E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDLIAELLR"	"[K].yPDLIAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"716.42352"	"1431.83977"	"1431.84088"	"-0.78"	"-0.00056"	"9/80"	"9"	"80"	"2289450.91851807"	"HCD"	"MS2"	"10.97804"	"96.5"	"100.000"	"84.6060"	"28924"	"28924"	"28907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.9"	""	"63.3"	""	"64.3"	""	"209.0"	"1.7"	"264.3"	"264.2"	""	"920"	"34"	"36.000"	"29.000"	"0.0184398690108559"	"19"	"0"	"7.817E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDLIAELLR"	"[K].yPDLIAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"716.42358"	"1431.83989"	"1431.84088"	"-0.69"	"-0.00050"	"9/80"	"9"	"80"	"1833176.48364258"	"HCD"	"MS2"	"9.894931"	"79.1"	"100.000"	"84.6700"	"29001"	"29001"	"28984"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.0"	""	"50.2"	""	"58.6"	""	"165.5"	"0.5"	"222.6"	"210.4"	""	"920"	"38"	"36.000"	"29.000"	"0.00806785030847209"	"18"	"0"	"4.953E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDLIAELLR"	"[K].yPDLIAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.42395"	"1431.84062"	"1431.84088"	"-0.18"	"-0.00013"	"11/80"	"11"	"80"	"1040034.65197754"	"HCD"	"MS2"	"10.53655"	"45.0"	"100.000"	"84.0066"	"28679"	"28679"	"28660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.7"	""	"32.5"	""	"26.3"	""	"97.8"	""	"119.3"	"130.7"	""	"884"	"34"	"36.000"	"29.000"	"0.0175154891140904"	"15"	"0"	"7.573E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDLIAELLR"	"[K].yPDLIAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"716.42401"	"1431.84075"	"1431.84088"	"-0.10"	"-0.00007"	"9/80"	"9"	"80"	"6152832.93157959"	"HCD"	"MS2"	"6.12613"	"232.6"	"100.000"	"84.3067"	"28802"	"28802"	"28785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.3"	""	"137.8"	""	"134.1"	""	"533.0"	""	"653.6"	"618.0"	""	"886"	"43"	"36.000"	"29.000"	"0.00228772451587528"	"19"	"0"	"0.0001117"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPDLIAELLR"	"[K].yPDLIAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"477.95187"	"1431.84107"	"1431.84088"	"0.13"	"0.00006"	"9/80"	"9"	"80"	"432412.93762207"	"HCD"	"MS2"	"6.159009"	"7.4"	"100.000"	"84.5591"	"28956"	"28956"	"28929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"11.8"	""	"7.7"	""	"12.1"	""	"18.3"	"14.2"	""	"886"	"25"	"36.000"	"29.000"	"0.148731763109629"	"18"	"0.0001889"	"0.0008962"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWWLDLK"	"[R].lWWLDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"716.44067"	"1431.87407"	"1431.87643"	"-1.65"	"-0.00118"	"6/48"	"6"	"48"	"519203.856933594"	"HCD"	"MS2"	"5.721839"	"41.5"	"100.000"	"82.7253"	"28207"	"28207"	"28189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.2"	""	"58.3"	""	"42.6"	""	"74.1"	"0.2"	"79.6"	"79.6"	""	"692"	"30"	"35.000"	"28.000"	"0.0385545908622739"	""	"0.0001889"	"0.0004777"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWWLDLK"	"[R].lWWLDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.1500"	"0.0000"	"1"	"1"	"1"	"716.44141"	"1431.87554"	"1431.87643"	"-0.62"	"-0.00045"	"4/48"	"4"	"48"	"1238368.6151123"	"HCD"	"MS2"	"32.45201"	"104.3"	"100.000"	"82.1073"	"27905"	"27905"	"27888"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.6"	""	"156.2"	""	"117.1"	""	"211.7"	"0.5"	"167.3"	"167.3"	""	"663"	"20"	"35.000"	"28.000"	"0.312236401247322"	""	"0.0002277"	"0.001112"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWWLDLK"	"[R].lWWLDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.2105"	"0.0000"	"1"	"1"	"1"	"477.96344"	"1431.87577"	"1431.87643"	"-0.46"	"-0.00022"	"8/48"	"8"	"48"	"945676.076721191"	"HCD"	"MS2"	"10.06103"	"35.7"	"100.000"	"82.3514"	"28055"	"28055"	"28030"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.7"	""	"50.3"	""	"44.6"	""	"67.6"	""	"65.7"	"64.4"	""	"663"	"19"	"35.000"	"28.000"	"0.398550660075672"	""	"0.001999"	"0.03145"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWWLDLK"	"[R].lWWLDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"716.44171"	"1431.87615"	"1431.87643"	"-0.20"	"-0.00014"	"10/48"	"10"	"48"	"396865.026489258"	"HCD"	"MS2"	"15.22293"	"33.6"	"100.000"	"82.7468"	"28165"	"28165"	"28144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.7"	""	"54.6"	""	"42.0"	""	"57.1"	"0.9"	"58.6"	"56.2"	""	"677"	"24"	"35.000"	"28.000"	"0.141761621792415"	""	"0.0001889"	"0.0006927"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWWLDLK"	"[R].lWWLDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.2963"	"0.0000"	"1"	"1"	"1"	"716.44177"	"1431.87627"	"1431.87643"	"-0.11"	"-0.00008"	"6/48"	"6"	"48"	"3663153.71929932"	"HCD"	"MS2"	"0"	"278.3"	"100.000"	"82.4256"	"28034"	"28034"	"28016"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"395.2"	""	"390.7"	""	"333.5"	""	"508.2"	""	"515.1"	"495.9"	""	"677"	"27"	"35.000"	"28.000"	"0.0620238431972655"	""	"0.000523"	"0.002788"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWWLDLK"	"[R].lWWLDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.1500"	"0.0000"	"1"	"1"	"1"	"716.44183"	"1431.87639"	"1431.87643"	"-0.03"	"-0.00002"	"4/48"	"4"	"48"	"1185363.92321777"	"HCD"	"MS2"	"56.85558"	"94.7"	"100.000"	"82.1116"	"27957"	"27957"	"27934"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.3"	""	"141.3"	""	"112.8"	""	"173.1"	""	"162.4"	"158.5"	""	"677"	"20"	"35.000"	"28.000"	"0.310140635906297"	""	"0.0002277"	"0.00121"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LWWLDLK"	"[R].lWWLDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.0345"	"0.0000"	"1"	"1"	"1"	"716.44189"	"1431.87651"	"1431.87643"	"0.06"	"0.00004"	"6/48"	"6"	"48"	"4606812.95056152"	"HCD"	"MS2"	"0.388357"	"345.7"	"100.000"	"82.4092"	"28079"	"28079"	"28062"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"481.4"	""	"539.2"	""	"422.2"	""	"644.0"	"0.4"	"597.0"	"588.4"	""	"677"	"29"	"35.000"	"28.000"	"0.0404164973361157"	""	"0.0001889"	"0.0006842"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTDVPK"	"[R].kGTDVPk.[W]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"477.97546"	"1431.91184"	"1431.91383"	"-1.39"	"-0.00066"	"4/62"	"4"	"62"	"48539374.4060059"	"HCD"	"MS2"	"22.90084"	"2756.2"	"84.420"	"26.4870"	"5338"	"5338"	"5317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4105.2"	""	"3605.8"	""	"3783.5"	""	"4645.8"	""	"4756.1"	"5398.1"	""	"354"	"6"	"32.000"	"25.000"	"4.98853778833808"	"17"	"0.001217"	"0.01822"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTDVPK"	"[R].kGTDVPk.[W]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"477.97559"	"1431.91220"	"1431.91383"	"-1.13"	"-0.00054"	"4/62"	"4"	"62"	"60039000.3635254"	"HCD"	"MS2"	"14.79969"	"2065.9"	"51.769"	"26.4035"	"5267"	"5267"	"5249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3078.3"	""	"2751.1"	""	"2818.6"	""	"3467.6"	""	"3508.2"	"3985.5"	""	"353"	"6"	"32.000"	"25.000"	"4.96300496565413"	"17"	"0.0006737"	"0.006576"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTDVPK"	"[R].kGTDVPk.[W]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"3"	"716.45984"	"1431.91240"	"1431.91383"	"-1.00"	"-0.00071"	"4/62"	"4"	"62"	"1216603.80529785"	"HCD"	"MS2"	"0"	"82.5"	"100.000"	"26.4676"	"5294"	"5294"	"5265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.7"	""	"101.0"	""	"119.1"	""	"131.6"	""	"142.7"	"165.7"	""	"342"	"11"	"32.000"	"25.000"	"1.22742823807403"	"23"	"0.002981"	"0.05411"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTDVPK"	"[R].kGTDVPk.[W]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"716.46027"	"1431.91326"	"1431.91383"	"-0.40"	"-0.00029"	"8/62"	"8"	"62"	"996081.188903809"	"HCD"	"MS2"	"0"	"69.1"	"100.000"	"26.5630"	"5369"	"5369"	"5349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.7"	""	"79.9"	""	"91.7"	""	"112.2"	"1.8"	"126.1"	"144.1"	""	"352"	"11"	"32.000"	"25.000"	"1.33509653205136"	"22"	"0.001217"	"0.0168"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTTLLDAK"	"[R].vLTTLLDAk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"477.97729"	"1431.91733"	"1431.91869"	"-0.95"	"-0.00045"	"9/72"	"9"	"72"	"2483531.93572998"	"HCD"	"MS2"	"10.47107"	"97.1"	"100.000"	"65.0906"	"20979"	"20979"	"20953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.8"	""	"136.8"	""	"152.7"	""	"158.6"	""	"174.9"	"174.6"	""	"310"	"31"	"31.000"	"24.000"	"0.0119490037704987"	"22"	"0.0004166"	"0.00239"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTTLLDAK"	"[R].vLTTLLDAk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"716.46240"	"1431.91753"	"1431.91869"	"-0.81"	"-0.00058"	"16/72"	"16"	"72"	"7540667.13183594"	"HCD"	"MS2"	"8.964788"	"465.3"	"100.000"	"65.0846"	"21029"	"21029"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"676.1"	""	"677.1"	""	"681.0"	""	"709.8"	"7.6"	"845.1"	"808.6"	""	"310"	"61"	"31.000"	"24.000"	"1.11771659273349E-05"	""	"0.0001308"	"0.0003031"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTTLLDAK"	"[R].vLTTLLDAk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"477.97745"	"1431.91779"	"1431.91869"	"-0.63"	"-0.00030"	"9/72"	"9"	"72"	"2968159.49859619"	"HCD"	"MS2"	"10.1356"	"110.7"	"100.000"	"65.0708"	"21024"	"21024"	"20995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.8"	""	"155.0"	""	"159.8"	""	"179.5"	""	"206.0"	"204.4"	""	"310"	"31"	"31.000"	"24.000"	"0.0119490037704987"	"22"	"0.0006037"	"0.003885"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTTLLDAK"	"[R].vLTTLLDAk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"716.46301"	"1431.91875"	"1431.91869"	"0.04"	"0.00003"	"16/72"	"16"	"72"	"6029885.27197266"	"HCD"	"MS2"	"10.88334"	"408.9"	"100.000"	"65.0676"	"20970"	"20970"	"20953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"600.9"	""	"592.6"	""	"618.8"	""	"598.3"	""	"763.0"	"702.3"	""	"310"	"61"	"31.000"	"24.000"	"1.11514591590573E-05"	""	"0"	"0.000168"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVITVK"	"[R].kGVITVk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"1"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"716.49615"	"1431.98503"	"1431.98660"	"-1.09"	"-0.00078"	"6/60"	"6"	"60"	"824746.166442871"	"HCD"	"MS2"	"0"	"88.0"	"100.000"	"32.2786"	"7622"	"7622"	"7592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.3"	""	"113.3"	""	"136.5"	""	"151.9"	"0.1"	"140.0"	"150.4"	""	"33"	"26"	"22.000"	"15.000"	"0.0042705513100026"	""	"0.008371"	"0.3544"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVITVK"	"[R].kGVITVk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"1"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"478.00009"	"1431.98572"	"1431.98660"	"-0.61"	"-0.00029"	"10/60"	"10"	"60"	"31773433.855835"	"HCD"	"MS2"	"6.881965"	"1187.7"	"47.697"	"32.2533"	"7611"	"7611"	"7592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2049.9"	""	"1729.0"	""	"1839.5"	""	"1826.6"	""	"1917.1"	"1874.9"	""	"33"	"17"	"22.000"	"15.000"	"0.0303727380242378"	"15"	"0.001966"	"0.02813"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVITVK"	"[R].kGVITVk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"1"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"478.00012"	"1431.98581"	"1431.98660"	"-0.55"	"-0.00026"	"6/60"	"6"	"60"	"33368032.0134277"	"HCD"	"MS2"	"11.18122"	"898.3"	"35.241"	"32.3783"	"7705"	"7705"	"7686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1478.7"	""	"1296.3"	""	"1391.1"	""	"1432.7"	""	"1468.1"	"1429.2"	""	"33"	"19"	"22.000"	"15.000"	"0.0219020085525407"	""	"0.003197"	"0.06669"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVITVK"	"[R].kGVITVk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"1"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"716.49725"	"1431.98723"	"1431.98660"	"0.44"	"0.00032"	"6/60"	"6"	"60"	"916417.889953613"	"HCD"	"MS2"	"0"	"95.1"	"100.000"	"32.3668"	"7701"	"7701"	"7670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.7"	""	"127.9"	""	"145.8"	""	"153.6"	"1.2"	"151.6"	"153.1"	""	"33"	"40"	"22.000"	"15.000"	"0.000148417100952456"	""	"0.0006737"	"0.006644"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WSPELPVCAR"	"[K].wSPELPVcAR.[I]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"716.86688"	"1432.72649"	"1432.72784"	"-0.95"	"-0.00068"	"8/76"	"8"	"76"	"2077707.97485352"	"HCD"	"MS2"	"48.95481"	"141.2"	"100.000"	"61.9803"	"19762"	"19762"	"19731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.7"	""	"199.7"	""	"209.0"	""	"224.3"	""	"266.2"	"259.2"	""	"680"	"9"	"35.000"	"28.000"	"4.14456463634454"	"21"	"0.002953"	"0.0516"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFGWYPHLGR"	"[R].aFGWYPHLGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"478.26163"	"1432.77033"	"1432.76872"	"1.12"	"0.00054"	"11/74"	"11"	"74"	"18810684.0762329"	"HCD"	"MS2"	"43.51221"	"547.8"	"100.000"	"47.5997"	"13913"	"13913"	"13890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"763.2"	""	"794.4"	""	"741.7"	""	"901.2"	""	"1037.2"	"964.6"	""	"949"	"7"	"36.000"	"29.000"	"10.357053431695"	"16"	"0.0002277"	"0.001307"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFGFGGTGK"	"[K].fGFGFGGTGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"716.90179"	"1432.79631"	"1432.79891"	"-1.81"	"-0.00130"	"9/72"	"9"	"72"	"1544003.6998291"	"HCD"	"MS2"	"0"	"173.4"	"100.000"	"53.7087"	"16337"	"16337"	"16318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"248.9"	""	"244.8"	""	"234.3"	""	"276.7"	"1.6"	"317.6"	"318.7"	""	"1004"	"40"	"37.000"	"30.000"	"0.00556805757261726"	"16"	"0"	"5.059E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFGFGGTGK"	"[K].fGFGFGGTGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"716.90253"	"1432.79778"	"1432.79891"	"-0.79"	"-0.00056"	"9/72"	"9"	"72"	"1549066.45684814"	"HCD"	"MS2"	"31.82874"	"175.0"	"100.000"	"53.9516"	"16488"	"16488"	"16468"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.3"	""	"216.5"	""	"245.1"	""	"279.6"	"0.6"	"332.9"	"343.4"	""	"994"	"52"	"36.000"	"29.000"	"0.000318681159562825"	"22"	"0"	"4.753E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFGFGGTGK"	"[K].fGFGFGGTGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"716.90417"	"1432.80107"	"1432.79891"	"1.51"	"0.00108"	"8/72"	"8"	"72"	"1275013.940979"	"HCD"	"MS2"	"44.53864"	"105.2"	"100.000"	"54.7661"	"16819"	"16819"	"16789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.3"	""	"137.1"	""	"145.6"	""	"188.6"	"0.2"	"204.2"	"181.1"	""	"1002"	"8"	"36.000"	"30.000"	"8.68635802874823"	"20"	"0.0001889"	"0.0009666"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAAATGATPIAGR"	"[K].fAAATGATPIAGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"716.90839"	"1432.80950"	"1432.81098"	"-1.04"	"-0.00074"	"11/102"	"11"	"102"	"2287284.01190186"	"HCD"	"MS2"	"0"	"121.3"	"100.000"	"37.2943"	"9667"	"9667"	"9640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.5"	""	"173.7"	""	"187.6"	""	"201.5"	""	"222.4"	"216.3"	""	"963"	"56"	"36.000"	"29.000"	"0.000118466700139708"	"24"	"0"	"3.778E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAAATGATPIAGR"	"[K].fAAATGATPIAGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"716.90881"	"1432.81035"	"1432.81098"	"-0.44"	"-0.00031"	"7/102"	"7"	"102"	"1241299.61651611"	"HCD"	"MS2"	"0"	"85.1"	"100.000"	"37.4494"	"9774"	"9774"	"9745"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.0"	""	"101.2"	""	"117.1"	""	"126.7"	"1.9"	"166.9"	"175.6"	""	"976"	"53"	"36.000"	"29.000"	"0.000252011188204771"	"19"	"0"	"4.053E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLDDWAGK"	"[K].gLLDDWAGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"716.91370"	"1432.82012"	"1432.82004"	"0.06"	"0.00004"	"14/66"	"14"	"66"	"3555163.56195068"	"HCD"	"MS2"	"14.50839"	"311.7"	"100.000"	"56.5812"	"17561"	"17561"	"17541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"420.3"	""	"378.1"	""	"388.5"	""	"512.1"	"7.1"	"604.7"	"646.8"	""	"929"	"49"	"36.000"	"29.000"	"0.000523583218393525"	"23"	"0"	"0.0001278"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLDDWAGK"	"[K].gLLDDWAGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8246"	"0.0000"	"1"	"1"	"1"	"716.91443"	"1432.82158"	"1432.82004"	"1.08"	"0.00077"	"8/66"	"8"	"66"	"3301678.90649414"	"HCD"	"MS2"	"22.5698"	"301.2"	"100.000"	"56.3780"	"17424"	"17424"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"399.0"	""	"352.0"	""	"395.4"	""	"513.7"	""	"571.3"	"626.6"	""	"913"	"57"	"36.000"	"29.000"	"8.32608388108914E-05"	"25"	"0"	"9.256E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLADIWAK"	"[R].aSLADIWAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z2Z8"	"7-dehydrocholesterol reductase OS=Rattus norvegicus OX=10116 GN=Dhcr7 PE=2 SV=1"	"Q9Z2Z8"	"7-dehydrocholesterol reductase OS=Rattus norvegicus OX=10116 GN=Dhcr7 PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"716.93085"	"1432.85442"	"1432.85642"	"-1.40"	"-0.00100"	"10/70"	"10"	"70"	"1253560.10394287"	"HCD"	"MS2"	"100"	"104.1"	"100.000"	"58.8592"	"18435"	"18435"	"18409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.7"	""	"142.4"	""	"135.1"	""	"171.8"	""	"206.9"	"194.3"	""	"796"	"10"	"35.000"	"29.000"	"3.57176660211298"	"14"	"0.000494"	"0.00264"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGGLDQK"	"[K].lFPGGLDQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.6190"	"0.0000"	"1"	"1"	"1"	"478.29016"	"1432.85593"	"1432.85642"	"-0.34"	"-0.00016"	"12/66"	"12"	"66"	"57992591.1719971"	"HCD"	"MS2"	"4.183507"	"657.8"	"38.574"	"49.8224"	"14817"	"14817"	"14798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"980.1"	""	"873.0"	""	"987.5"	""	"1050.9"	""	"1143.1"	"1195.2"	""	"768"	"42"	"35.000"	"28.000"	"0.00271851181203509"	""	"0.0001859"	"0.0003629"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGGLDQK"	"[K].lFPGGLDQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"716.93170"	"1432.85613"	"1432.85642"	"-0.21"	"-0.00015"	"6/66"	"6"	"66"	"32963028.4127808"	"HCD"	"MS2"	"1.215364"	"2085.1"	"100.000"	"49.7760"	"14799"	"14799"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3182.6"	""	"2818.0"	""	"3135.9"	""	"3342.4"	""	"3572.5"	"3710.8"	""	"766"	"40"	"35.000"	"28.000"	"0.00364920930821059"	"27"	"0.0001889"	"0.0009247"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGGLDQK"	"[K].lFPGGLDQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.6750"	"0.0000"	"1"	"1"	"1"	"478.29025"	"1432.85620"	"1432.85642"	"-0.15"	"-0.00007"	"14/66"	"14"	"66"	"40470192.4380493"	"HCD"	"MS2"	"3.86323"	"1099.2"	"89.124"	"49.5538"	"14661"	"14661"	"14639"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1633.6"	""	"1454.5"	""	"1616.6"	""	"1751.7"	""	"1929.2"	"2028.9"	""	"766"	"40"	"35.000"	"28.000"	"0.00349300151473313"	"28"	"0.0001889"	"0.0005019"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGGLDQK"	"[K].lFPGGLDQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"716.93213"	"1432.85698"	"1432.85642"	"0.39"	"0.00028"	"6/66"	"6"	"66"	"56742697.1188965"	"HCD"	"MS2"	"0.5051562"	"1725.9"	"47.519"	"49.5394"	"14656"	"14656"	"14639"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2610.3"	""	"2289.0"	""	"2604.7"	""	"2698.9"	""	"2982.3"	"3158.5"	""	"759"	"44"	"35.000"	"28.000"	"0.00165276756063673"	"26"	"0.0004166"	"0.002224"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVLADALK"	"[R].mNVLADALk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"716.93329"	"1432.85930"	"1432.85979"	"-0.34"	"-0.00025"	"16/78"	"16"	"78"	"7629760.67327881"	"HCD"	"MS2"	"1.936501"	"534.9"	"100.000"	"57.8296"	"18071"	"18071"	"18053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1014.8"	""	"979.9"	""	"1036.9"	""	"477.5"	"2.7"	"801.3"	"730.5"	""	"750"	"62"	"35.000"	"28.000"	"2.58839926440091E-05"	""	"0"	"0.0001369"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVLADALK"	"[R].mNVLADALk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"478.29138"	"1432.85959"	"1432.85979"	"-0.14"	"-0.00007"	"10/78"	"10"	"78"	"4802128.95410156"	"HCD"	"MS2"	"4.788008"	"167.5"	"100.000"	"57.7206"	"17973"	"17973"	"17947"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"287.9"	""	"279.3"	""	"304.8"	""	"175.6"	"1.8"	"267.3"	"265.6"	""	"750"	"32"	"35.000"	"28.000"	"0.0262440748500853"	"22"	"0"	"0.0001368"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVLADALK"	"[R].mNVLADALk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"716.93365"	"1432.86003"	"1432.85979"	"0.17"	"0.00012"	"16/78"	"16"	"78"	"8156233.35125732"	"HCD"	"MS2"	"4.790165"	"563.4"	"100.000"	"57.6630"	"17949"	"17949"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1052.5"	""	"1055.0"	""	"1071.0"	""	"485.8"	"2.1"	"833.7"	"813.1"	""	"738"	"62"	"35.000"	"28.000"	"2.57647757104476E-05"	""	"0"	"0.0001344"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVLADALK"	"[R].mNVLADALk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"478.29153"	"1432.86005"	"1432.85979"	"0.18"	"0.00009"	"10/78"	"10"	"78"	"4851226.01477051"	"HCD"	"MS2"	"13.0582"	"182.0"	"100.000"	"57.9379"	"18116"	"18116"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.2"	""	"305.9"	""	"342.9"	""	"197.3"	""	"294.1"	"274.7"	""	"738"	"36"	"35.000"	"28.000"	"0.00997760636356163"	"24"	"0"	"0.0001317"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLSVGLGFLR"	"[R].eLLSVGLGFLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1W6"	"Protein LYRIC OS=Rattus norvegicus OX=10116 GN=Mtdh PE=1 SV=2"	"Q9Z1W6"	"Protein LYRIC OS=Rattus norvegicus OX=10116 GN=Mtdh PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"716.93927"	"1432.87126"	"1432.87252"	"-0.87"	"-0.00063"	"6/86"	"6"	"86"	"424844.743286133"	"HCD"	"MS2"	"45.04272"	"24.2"	"100.000"	"80.1060"	"27139"	"27139"	"27119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.4"	""	"37.7"	""	"33.2"	""	"41.9"	""	"46.0"	"42.7"	""	"638"	"38"	"35.000"	"28.000"	"0.00500945734582404"	"18"	"7.476E-05"	"0.0001887"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLSVGLGFLR"	"[R].eLLSVGLGFLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1W6"	"Protein LYRIC OS=Rattus norvegicus OX=10116 GN=Mtdh PE=1 SV=2"	"Q9Z1W6"	"Protein LYRIC OS=Rattus norvegicus OX=10116 GN=Mtdh PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"716.94012"	"1432.87297"	"1432.87252"	"0.32"	"0.00023"	"6/86"	"6"	"86"	"334481.95715332"	"HCD"	"MS2"	"48.02546"	"21.0"	"100.000"	"80.1664"	"27113"	"27113"	"27089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.6"	""	"26.3"	""	"35.9"	""	"33.9"	""	"36.8"	"37.2"	""	"636"	"24"	"35.000"	"28.000"	"0.12601641489323"	"17"	"0.0006037"	"0.005314"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNTWISLK"	"[K].lNTWISLk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"716.94922"	"1432.89116"	"1432.89281"	"-1.15"	"-0.00082"	"6/74"	"6"	"74"	"3579491.59204102"	"HCD"	"MS2"	"48.22245"	"222.8"	"100.000"	"62.5960"	"20013"	"20013"	"19987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"335.6"	""	"311.3"	""	"339.7"	""	"328.7"	"1.0"	"388.4"	"404.5"	""	"520"	"24"	"34.000"	"27.000"	"0.112712828380757"	"18"	"0.0001889"	"0.0007285"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNTWISLK"	"[K].lNTWISLk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"716.94952"	"1432.89177"	"1432.89281"	"-0.72"	"-0.00052"	"12/74"	"12"	"74"	"2547282.7074585"	"HCD"	"MS2"	"38.61133"	"184.4"	"100.000"	"62.4526"	"19901"	"19901"	"19881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.7"	""	"274.2"	""	"277.1"	""	"295.8"	""	"316.7"	"313.6"	""	"526"	"34"	"34.000"	"27.000"	"0.0102791155593402"	"22"	"0.0001889"	"0.0007611"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMSWINGIR"	"[R].dLMSWINGIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"717.39117"	"1433.77507"	"1433.77724"	"-1.51"	"-0.00108"	"9/84"	"9"	"84"	"1772304.65600586"	"HCD"	"MS2"	"0"	"81.1"	"100.000"	"76.5862"	"25708"	"25708"	"25703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.4"	""	"113.2"	""	"119.9"	""	"89.7"	"0.9"	"174.8"	"158.1"	""	"1006"	"20"	"37.000"	"30.000"	"0.505321742510033"	"20"	"0.0001859"	"0.0003176"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"717.44037"	"1433.87346"	"1433.87682"	"-2.34"	"-0.00168"	"8/66"	"8"	"66"	"2588960.79650879"	"HCD"	"MS2"	"0"	"220.6"	"100.000"	"55.2599"	"17021"	"17021"	"16997"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"375.1"	""	"346.6"	""	"244.6"	""	"388.4"	"3.1"	"382.8"	"346.0"	""	"541"	"58"	"34.000"	"27.000"	"4.33677878181656E-05"	"24"	"0"	"0.0001165"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"717.44092"	"1433.87456"	"1433.87682"	"-1.58"	"-0.00113"	"7/64"	"7"	"64"	"29094613.4067383"	"HCD"	"MS2"	"0"	"531.9"	"32.008"	"50.6967"	"15123"	"15123"	"15106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"806.2"	""	"723.2"	""	"776.5"	""	"767.2"	"0.4"	"957.3"	"1006.6"	""	"542"	"32"	"34.000"	"27.000"	"0.0167097245504462"	"19"	"0.001217"	"0.01649"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"478.62973"	"1433.87464"	"1433.87682"	"-1.52"	"-0.00073"	"6/64"	"6"	"64"	"8616823.18017578"	"HCD"	"MS2"	"43.32374"	"294.9"	"100.000"	"50.1591"	"14955"	"14955"	"14932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.0"	""	"409.5"	""	"455.1"	""	"452.8"	""	"525.8"	"523.3"	""	"539"	"37"	"34.000"	"27.000"	"0.00526694483331468"	"24"	"0.0001889"	"0.0005165"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"478.62973"	"1433.87464"	"1433.87682"	"-1.52"	"-0.00073"	"6/64"	"6"	"64"	"13964073.5487061"	"HCD"	"MS2"	"0"	"449.7"	"100.000"	"50.5118"	"15097"	"15097"	"15076"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"651.2"	""	"591.3"	""	"675.7"	""	"707.1"	""	"824.1"	"813.8"	""	"539"	"45"	"34.000"	"27.000"	"0.000799022059476809"	"22"	"0.0001889"	"0.0007193"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"717.44098"	"1433.87468"	"1433.87682"	"-1.49"	"-0.00107"	"7/64"	"7"	"64"	"27068777.315918"	"HCD"	"MS2"	"0.3684317"	"759.8"	"49.734"	"50.9406"	"15272"	"15272"	"15254"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1129.3"	""	"1007.0"	""	"1168.6"	""	"1095.5"	""	"1358.8"	"1436.3"	""	"537"	"33"	"34.000"	"27.000"	"0.0134878985286761"	"20"	"0.00103"	"0.01247"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"717.44110"	"1433.87493"	"1433.87682"	"-1.32"	"-0.00095"	"14/66"	"14"	"66"	"1618129.34185791"	"HCD"	"MS2"	"0"	"152.1"	"100.000"	"55.0242"	"16871"	"16871"	"16843"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.2"	""	"218.7"	""	"202.0"	""	"274.5"	"2.4"	"265.6"	"248.3"	""	"537"	"49"	"34.000"	"27.000"	"0.000349095531701939"	"24"	"0"	"8.553E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"717.44116"	"1433.87505"	"1433.87682"	"-1.24"	"-0.00089"	"7/64"	"7"	"64"	"48664991.8518066"	"HCD"	"MS2"	"0"	"567.1"	"20.760"	"50.3493"	"15032"	"15032"	"15020"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"829.8"	""	"758.1"	""	"829.2"	""	"875.1"	"3.6"	"1034.2"	"1041.4"	""	"537"	"34"	"34.000"	"27.000"	"0.00977111872001551"	"23"	"0.001783"	"0.02492"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"717.44116"	"1433.87505"	"1433.87682"	"-1.24"	"-0.00089"	"7/64"	"7"	"64"	"46384557.5966797"	"HCD"	"MS2"	"0"	"533.4"	"20.353"	"50.6333"	"15147"	"15147"	"15132"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"786.8"	""	"711.2"	""	"797.2"	""	"777.4"	""	"976.6"	"1006.7"	""	"537"	"33"	"34.000"	"27.000"	"0.0121323321064667"	"19"	"0.001058"	"0.01369"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"478.62991"	"1433.87519"	"1433.87682"	"-1.14"	"-0.00055"	"9/64"	"9"	"64"	"9478666.37261963"	"HCD"	"MS2"	"0"	"334.5"	"100.000"	"50.2632"	"14946"	"14946"	"14924"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"455.0"	""	"442.9"	""	"522.5"	""	"521.1"	""	"629.9"	"601.3"	""	"537"	"27"	"34.000"	"27.000"	"0.0535727931569144"	"20"	"0.0004166"	"0.00212"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"478.62997"	"1433.87537"	"1433.87682"	"-1.01"	"-0.00048"	"9/66"	"9"	"66"	"20430165.4703369"	"HCD"	"MS2"	"3.929031"	"305.8"	"51.942"	"55.7173"	"17208"	"17208"	"17189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"492.1"	""	"499.5"	""	"349.6"	""	"517.1"	""	"533.2"	"503.6"	""	"530"	"25"	"34.000"	"27.000"	"0.0861481338071401"	"21"	"0.000523"	"0.003058"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"717.44141"	"1433.87554"	"1433.87682"	"-0.90"	"-0.00064"	"7/66"	"7"	"66"	"1954375.42272949"	"HCD"	"MS2"	"16.97659"	"170.7"	"100.000"	"56.2721"	"17435"	"17435"	"17413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.1"	""	"262.3"	""	"220.4"	""	"278.1"	"3.1"	"280.1"	"289.3"	""	"542"	"43"	"34.000"	"27.000"	"0.00135509358978761"	"25"	"0.0001889"	"0.001071"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"717.44153"	"1433.87578"	"1433.87682"	"-0.73"	"-0.00052"	"7/64"	"7"	"64"	"43282686.1364746"	"HCD"	"MS2"	"0"	"574.2"	"23.394"	"50.3963"	"15000"	"15000"	"14984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"870.6"	""	"773.1"	""	"851.4"	""	"859.1"	""	"1053.9"	"1029.9"	""	"545"	"34"	"34.000"	"27.000"	"0.00973568483964006"	"23"	"0.0008453"	"0.007958"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"717.44159"	"1433.87590"	"1433.87682"	"-0.64"	"-0.00046"	"7/64"	"7"	"64"	"39399996.7606201"	"HCD"	"MS2"	"0"	"896.4"	"40.169"	"50.0984"	"14881"	"14881"	"14865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1314.1"	""	"1177.9"	""	"1343.8"	""	"1398.5"	"3.5"	"1604.1"	"1646.8"	""	"545"	"33"	"34.000"	"27.000"	"0.0135946022832853"	"23"	"0.0006037"	"0.005704"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGIILPGK"	"[K].yDGIILPGk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"478.63022"	"1433.87610"	"1433.87682"	"-0.50"	"-0.00024"	"9/64"	"9"	"64"	"11639705.0712891"	"HCD"	"MS2"	"8.718973"	"359.8"	"100.000"	"52.2986"	"15828"	"15828"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"511.8"	""	"539.8"	""	"549.8"	""	"583.1"	""	"665.4"	"558.4"	""	"542"	"34"	"34.000"	"27.000"	"0.0107144354038463"	"25"	"0.0004166"	"0.002201"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"478.63025"	"1433.87619"	"1433.87682"	"-0.44"	"-0.00021"	"6/66"	"6"	"66"	"13409675.2955322"	"HCD"	"MS2"	"15.5735"	"408.5"	"100.000"	"55.2355"	"16957"	"16957"	"16939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"691.0"	""	"674.6"	""	"485.7"	""	"699.8"	""	"701.1"	"612.2"	""	"538"	"26"	"34.000"	"27.000"	"0.0674143389065639"	"22"	"0.0003839"	"0.001922"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGIILPGK"	"[K].yDGIILPGk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"478.63031"	"1433.87638"	"1433.87682"	"-0.31"	"-0.00015"	"9/64"	"9"	"64"	"10597640.052063"	"HCD"	"MS2"	"6.504772"	"314.0"	"100.000"	"52.1007"	"15697"	"15697"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"453.6"	""	"441.4"	""	"483.6"	""	"516.5"	"1.2"	"593.6"	"483.0"	""	"508"	"39"	"34.000"	"27.000"	"0.00331004361726884"	""	"0.0003839"	"0.001824"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"478.63034"	"1433.87647"	"1433.87682"	"-0.25"	"-0.00012"	"6/64"	"6"	"64"	"9397227.38598633"	"HCD"	"MS2"	"0"	"309.2"	"100.000"	"49.9608"	"14826"	"14826"	"14809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"463.7"	""	"420.3"	""	"455.9"	""	"470.4"	""	"556.1"	"564.9"	""	"508"	"43"	"34.000"	"27.000"	"0.00132994510892781"	"21"	"0.0001889"	"0.0004767"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"717.44189"	"1433.87651"	"1433.87682"	"-0.22"	"-0.00016"	"7/64"	"7"	"64"	"12537760.4821777"	"HCD"	"MS2"	"0"	"753.1"	"97.389"	"50.0722"	"14920"	"14920"	"14905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1127.7"	""	"1013.1"	""	"1104.2"	""	"1207.1"	""	"1351.1"	"1330.8"	""	"508"	"31"	"34.000"	"27.000"	"0.019762128396411"	"23"	"0.0008731"	"0.008886"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"478.63037"	"1433.87656"	"1433.87682"	"-0.18"	"-0.00009"	"6/64"	"6"	"64"	"2921827.52587891"	"HCD"	"MS2"	"2.248678"	"132.0"	"100.000"	"50.9196"	"15214"	"15214"	"15186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.8"	""	"181.1"	""	"211.5"	""	"200.7"	""	"244.2"	"240.9"	""	"508"	"27"	"34.000"	"27.000"	"0.0489591327950498"	"19"	"0.0004166"	"0.002213"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"717.44196"	"1433.87663"	"1433.87682"	"-0.13"	"-0.00009"	"14/66"	"14"	"66"	"32688196.1274414"	"HCD"	"MS2"	"0"	"521.4"	"21.122"	"55.6220"	"17116"	"17116"	"17099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"810.6"	""	"826.4"	""	"650.8"	""	"835.5"	""	"938.1"	"875.8"	""	"508"	"48"	"34.000"	"27.000"	"0.000410992329561339"	""	"0.0001889"	"0.0004377"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"717.44196"	"1433.87663"	"1433.87682"	"-0.13"	"-0.00009"	"14/66"	"14"	"66"	"16625138.470459"	"HCD"	"MS2"	"1.158993"	"598.8"	"48.170"	"55.8673"	"17270"	"17270"	"17253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"979.0"	""	"957.8"	""	"723.2"	""	"959.5"	"5.0"	"1071.0"	"971.4"	""	"508"	"46"	"34.000"	"27.000"	"0.000702803177934524"	""	"0.0001889"	"0.0004767"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"478.63040"	"1433.87665"	"1433.87682"	"-0.12"	"-0.00006"	"6/66"	"6"	"66"	"11895289.5431519"	"HCD"	"MS2"	"19.06494"	"348.0"	"100.000"	"55.4094"	"17082"	"17082"	"17061"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"598.2"	""	"573.2"	""	"405.2"	""	"617.7"	""	"600.9"	"499.9"	""	"508"	"25"	"34.000"	"27.000"	"0.0770608360785345"	"24"	"0.0004166"	"0.002263"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGIILPGK"	"[K].yDGIILPGk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"717.44202"	"1433.87676"	"1433.87682"	"-0.05"	"-0.00003"	"4/64"	"4"	"64"	"2336927.36889648"	"HCD"	"MS2"	"35.45803"	"184.3"	"100.000"	"52.4318"	"15832"	"15832"	"15810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.9"	""	"268.8"	""	"250.9"	""	"286.1"	"1.8"	"346.7"	"321.4"	""	"508"	"14"	"34.000"	"27.000"	"1.02054865955631"	"16"	"0.000523"	"0.003273"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"717.44202"	"1433.87676"	"1433.87682"	"-0.05"	"-0.00003"	"7/64"	"7"	"64"	"3662590.27050781"	"HCD"	"MS2"	"15.53329"	"265.6"	"100.000"	"51.0211"	"15255"	"15255"	"15234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.8"	""	"364.7"	""	"378.9"	""	"399.3"	"0.4"	"501.2"	"507.4"	""	"508"	"32"	"34.000"	"27.000"	"0.015025665508057"	"23"	"0.0003839"	"0.00207"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"478.63049"	"1433.87693"	"1433.87682"	"0.07"	"0.00003"	"6/66"	"6"	"66"	"15718705.8897095"	"HCD"	"MS2"	"4.492889"	"378.7"	"82.832"	"55.5437"	"17084"	"17084"	"17067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"602.3"	""	"602.2"	""	"459.9"	""	"630.8"	"3.0"	"661.7"	"623.8"	""	"508"	"30"	"34.000"	"27.000"	"0.026781427168338"	"24"	"0.0006037"	"0.004942"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"717.44220"	"1433.87712"	"1433.87682"	"0.21"	"0.00015"	"7/66"	"7"	"66"	"1985283.75653076"	"HCD"	"MS2"	"7.410458"	"166.4"	"100.000"	"56.0756"	"17301"	"17301"	"17275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.7"	""	"271.6"	""	"236.9"	""	"260.0"	"2.5"	"258.9"	"272.5"	""	"508"	"41"	"34.000"	"27.000"	"0.00180648232467946"	"22"	"0.0001889"	"0.0005141"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGIILPGK"	"[K].yDGIILPGk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"717.44220"	"1433.87712"	"1433.87682"	"0.21"	"0.00015"	"8/64"	"8"	"64"	"9940940.79931641"	"HCD"	"MS2"	"0"	"626.8"	"100.000"	"52.0757"	"15686"	"15686"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"907.8"	""	"886.3"	""	"940.1"	""	"988.5"	"8.6"	"1252.9"	"951.9"	""	"508"	"41"	"34.000"	"27.000"	"0.00216189061703404"	"22"	"0.0001308"	"0.0002549"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"478.63058"	"1433.87720"	"1433.87682"	"0.26"	"0.00013"	"9/64"	"9"	"64"	"3557112.50750732"	"HCD"	"MS2"	"16.4605"	"159.3"	"100.000"	"51.1431"	"15355"	"15355"	"15334"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.0"	""	"217.0"	""	"243.2"	""	"234.5"	""	"290.7"	"300.2"	""	"506"	"29"	"34.000"	"27.000"	"0.0330461234697356"	"18"	"0.0002277"	"0.001279"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"478.63058"	"1433.87720"	"1433.87682"	"0.26"	"0.00013"	"8/64"	"8"	"64"	"9966715.80651855"	"HCD"	"MS2"	"13.2608"	"345.2"	"100.000"	"50.5934"	"15080"	"15080"	"15058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"522.5"	""	"475.3"	""	"487.5"	""	"512.3"	""	"635.6"	"638.5"	""	"506"	"31"	"34.000"	"27.000"	"0.0214348535777571"	"21"	"0.0001889"	"0.0008766"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGIILPGK"	"[K].yDGIILPGk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"717.44226"	"1433.87724"	"1433.87682"	"0.29"	"0.00021"	"10/64"	"10"	"64"	"3225138.79034424"	"HCD"	"MS2"	"27.00125"	"243.5"	"100.000"	"52.5518"	"15931"	"15931"	"15910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.9"	""	"322.9"	""	"349.1"	""	"394.0"	""	"489.5"	"426.6"	""	"506"	"29"	"34.000"	"27.000"	"0.033505840840425"	"20"	"0.0001889"	"0.0005177"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"717.44232"	"1433.87737"	"1433.87682"	"0.38"	"0.00027"	"14/66"	"14"	"66"	"103598576.89917"	"HCD"	"MS2"	"0"	"1281.5"	"17.781"	"55.3093"	"16988"	"16988"	"16971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2186.7"	""	"2162.0"	""	"1443.2"	""	"2223.0"	"12.2"	"2162.4"	"1927.2"	""	"506"	"48"	"34.000"	"27.000"	"0.000386474212734233"	"25"	"0.0001889"	"0.0008603"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGIILPGK"	"[K].yDGIILPGk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"717.44244"	"1433.87761"	"1433.87682"	"0.55"	"0.00039"	"12/64"	"12"	"64"	"6658223.31781006"	"HCD"	"MS2"	"4.334302"	"418.8"	"100.000"	"52.2456"	"15806"	"15806"	"15782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"612.7"	"4.4"	"593.9"	""	"605.8"	""	"652.9"	""	"827.2"	"671.4"	""	"506"	"40"	"34.000"	"27.000"	"0.00244410872384423"	"23"	"0.0001308"	"0.0002462"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"717.44257"	"1433.87786"	"1433.87682"	"0.72"	"0.00052"	"7/64"	"7"	"64"	"3094904.03692627"	"HCD"	"MS2"	"20.8585"	"229.4"	"100.000"	"51.2718"	"15408"	"15408"	"15382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.4"	""	"308.1"	""	"335.8"	""	"348.3"	""	"415.3"	"448.8"	""	"506"	"27"	"34.000"	"27.000"	"0.0471108045575705"	"18"	"0.0002277"	"0.00116"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].gPDSVFLIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"717.44257"	"1433.87786"	"1433.87682"	"0.72"	"0.00052"	"14/66"	"14"	"66"	"144394321.324219"	"HCD"	"MS2"	"0"	"1022.4"	"10.667"	"55.5542"	"17142"	"17142"	"17125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1757.3"	""	"1707.0"	""	"1184.4"	""	"1752.4"	""	"1731.5"	"1535.3"	""	"506"	"48"	"34.000"	"27.000"	"0.000380294917420776"	"25"	"0.0003839"	"0.002003"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"478.63083"	"1433.87793"	"1433.87682"	"0.77"	"0.00037"	"8/64"	"8"	"64"	"10666033.1675415"	"HCD"	"MS2"	"14.37381"	"361.0"	"100.000"	"50.8350"	"15229"	"15229"	"15206"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"555.3"	""	"478.4"	""	"542.6"	""	"534.0"	""	"658.8"	"650.8"	""	"506"	"31"	"34.000"	"27.000"	"0.0213363693714362"	"21"	"0.0001889"	"0.0008434"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLQDVYK"	"[R].lPLQDVYk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"717.44299"	"1433.87871"	"1433.87682"	"1.32"	"0.00094"	"7/64"	"7"	"64"	"11606156.605835"	"HCD"	"MS2"	"0"	"614.9"	"86.647"	"49.8132"	"14767"	"14767"	"14751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"925.0"	""	"826.3"	""	"923.9"	""	"985.1"	""	"1095.1"	"1069.1"	""	"498"	"31"	"33.000"	"26.000"	"0.019597440163408"	"23"	"0.00103"	"0.01223"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLFGGAGVGK"	"[K].iGLFGGAGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"478.63336"	"1433.88553"	"1433.88806"	"-1.76"	"-0.00084"	"15/82"	"15"	"82"	"2781060.38189697"	"HCD"	"MS2"	"30.75542"	"114.0"	"100.000"	"53.2576"	"16163"	"16163"	"16151"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"126.9"	""	"161.2"	""	"173.8"	""	"172.7"	""	"210.7"	"244.3"	""	"437"	"49"	"33.000"	"26.000"	"0.000283433670709995"	"22"	"0"	"1.655E-05"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLFGGAGVGK"	"[K].iGLFGGAGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"717.44641"	"1433.88555"	"1433.88806"	"-1.75"	"-0.00126"	"9/82"	"9"	"82"	"1743789.72766113"	"HCD"	"MS2"	"32.64405"	"173.2"	"100.000"	"53.5301"	"16267"	"16267"	"16252"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"211.0"	""	"252.9"	""	"241.5"	""	"276.6"	""	"324.5"	"337.9"	""	"437"	"50"	"33.000"	"26.000"	"0.000239580485857286"	"25"	"0"	"1.257E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLFGGAGVGK"	"[K].iGLFGGAGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"717.44666"	"1433.88603"	"1433.88806"	"-1.41"	"-0.00101"	"8/82"	"8"	"82"	"4196432.1395874"	"HCD"	"MS2"	"0"	"350.1"	"100.000"	"53.1936"	"16139"	"16139"	"16130"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"405.5"	""	"481.4"	""	"521.8"	""	"555.1"	""	"692.4"	"673.5"	""	"437"	"35"	"33.000"	"26.000"	"0.00708682063908328"	"15"	"0"	"2.815E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLFGGAGVGK"	"[K].iGLFGGAGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"717.44690"	"1433.88652"	"1433.88806"	"-1.07"	"-0.00077"	"9/82"	"9"	"82"	"4610137.28167725"	"HCD"	"MS2"	"0"	"378.1"	"100.000"	"53.4043"	"16275"	"16275"	"16264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"460.3"	""	"536.3"	""	"556.5"	""	"602.9"	"4.2"	"696.3"	"727.5"	""	"435"	"51"	"33.000"	"26.000"	"0.000159756766324172"	"20"	"0"	"3.034E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLFGGAGVGK"	"[K].iGLFGGAGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"478.63379"	"1433.88681"	"1433.88806"	"-0.87"	"-0.00041"	"14/82"	"14"	"82"	"17596444.8637085"	"HCD"	"MS2"	"45.81095"	"544.1"	"93.489"	"53.1112"	"16160"	"16160"	"16134"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"656.8"	""	"775.7"	""	"812.6"	""	"865.5"	""	"1009.7"	"1036.9"	""	"439"	"40"	"33.000"	"26.000"	"0.0020297124917944"	"18"	"0"	"2.012E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLFGGAGVGK"	"[K].iGLFGGAGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"717.44714"	"1433.88701"	"1433.88806"	"-0.73"	"-0.00052"	"14/82"	"14"	"82"	"31618323.6437988"	"HCD"	"MS2"	"0"	"502.4"	"20.943"	"53.1274"	"16167"	"16167"	"16150"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"603.9"	""	"747.1"	""	"742.6"	""	"763.4"	"4.7"	"937.0"	"963.7"	""	"441"	"44"	"33.000"	"26.000"	"0.000842187117202302"	"20"	"0"	"0.0001015"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLFGGAGVGK"	"[K].iGLFGGAGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"478.63400"	"1433.88745"	"1433.88806"	"-0.42"	"-0.00020"	"13/82"	"13"	"82"	"13624085.8145142"	"HCD"	"MS2"	"4.507023"	"374.5"	"80.249"	"52.9517"	"16045"	"16045"	"16018"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"444.5"	""	"555.8"	""	"551.4"	""	"588.9"	""	"669.8"	"743.7"	""	"437"	"38"	"33.000"	"26.000"	"0.00320960391665185"	"19"	"0"	"2.728E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLFGGAGVGK"	"[K].iGLFGGAGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"717.44781"	"1433.88835"	"1433.88806"	"0.21"	"0.00015"	"14/82"	"14"	"82"	"29100279.0925293"	"HCD"	"MS2"	"0"	"868.4"	"41.242"	"52.9266"	"16035"	"16035"	"16018"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1041.1"	""	"1286.2"	""	"1280.2"	""	"1379.6"	""	"1582.8"	"1663.5"	""	"426"	"44"	"33.000"	"26.000"	"0.000791370037976978"	"20"	"0"	"8.868E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTELGAK"	"[K].kTELGAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"1"	"3"	"3"	"0.3000"	"0.0000"	"1"	"1"	"1"	"478.64740"	"1433.92765"	"1433.92948"	"-1.28"	"-0.00061"	"7/62"	"7"	"62"	"5588622.08795166"	"HCD"	"MS2"	"16.92466"	"512.0"	"100.000"	"28.0446"	"5934"	"5934"	"5916"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"688.0"	""	"674.4"	""	"680.6"	""	"824.4"	""	"997.3"	"995.0"	""	"169"	"10"	"29.000"	"22.000"	"0.821971404091535"	"20"	"0.0007076"	"0.007152"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTELGAK"	"[K].kTELGAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"1"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"478.64740"	"1433.92765"	"1433.92948"	"-1.28"	"-0.00061"	"6/62"	"6"	"62"	"6118854.75762939"	"HCD"	"MS2"	"26.81349"	"512.8"	"100.000"	"28.1079"	"5995"	"5995"	"5969"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"739.2"	""	"642.7"	""	"691.7"	""	"808.8"	""	"1001.4"	"981.9"	""	"169"	"7"	"29.000"	"22.000"	"1.66669721201705"	"19"	"0.00109"	"0.01477"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMSWINGIR"	"[R].dLMSWInGIR.[G]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"717.88354"	"1434.75981"	"1434.76125"	"-1.00"	"-0.00072"	"7/84"	"7"	"84"	"2108517.89758301"	"HCD"	"MS2"	"22.98361"	"109.4"	"100.000"	"69.9220"	"22943"	"22943"	"22928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.1"	""	"148.2"	""	"139.4"	""	"134.8"	""	"202.9"	"255.2"	""	"894"	"55"	"36.000"	"29.000"	"0.000135303030236128"	""	"0"	"4.734E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMSWINGIR"	"[R].dLMSWInGIR.[G]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"717.88416"	"1434.76103"	"1434.76125"	"-0.15"	"-0.00011"	"7/84"	"7"	"84"	"999214.188415527"	"HCD"	"MS2"	"18.26892"	"51.6"	"100.000"	"79.7668"	"26950"	"26950"	"26929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.5"	""	"81.0"	""	"71.1"	""	"53.7"	"0.4"	"93.5"	"123.1"	""	"889"	"51"	"36.000"	"29.000"	"0.000349841853519471"	"29"	"0"	"3.404E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIWQIPER"	"[R].tYIWQIPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"478.93573"	"1434.79264"	"1434.79427"	"-1.14"	"-0.00054"	"10/86"	"10"	"86"	"3705919.26177979"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"52.6296"	"15913"	"15913"	"15890"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.9"	""	"90.1"	""	"72.4"	""	"115.3"	"2.9"	"119.8"	"124.0"	""	"1016"	"35"	"37.000"	"30.000"	"0.0150267033300819"	"20"	"0.0001859"	"0.0003644"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIWQIPER"	"[R].tYIWQIPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"478.93576"	"1434.79273"	"1434.79427"	"-1.07"	"-0.00051"	"10/86"	"10"	"86"	"4136615.6697998"	"HCD"	"MS2"	"21.14485"	"70.0"	"100.000"	"52.8440"	"16051"	"16051"	"16022"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.9"	""	"91.6"	""	"84.3"	""	"117.6"	"1.2"	"142.1"	"137.4"	""	"1016"	"36"	"37.000"	"30.000"	"0.0115841377257621"	"20"	"0.0001889"	"0.000731"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIWQIPER"	"[R].tYIWQIPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"717.90015"	"1434.79302"	"1434.79427"	"-0.87"	"-0.00062"	"10/86"	"10"	"86"	"5892603.88409424"	"HCD"	"MS2"	"16.66526"	"307.9"	"100.000"	"52.7130"	"15997"	"15997"	"15974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"479.7"	""	"449.8"	""	"374.8"	""	"517.7"	"1.1"	"573.3"	"519.7"	""	"1020"	"26"	"37.000"	"30.000"	"0.132608137721429"	"19"	"0.0003146"	"0.001436"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIWQIPER"	"[R].tYIWQIPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"717.90112"	"1434.79497"	"1434.79427"	"0.49"	"0.00035"	"10/86"	"10"	"86"	"5778745.93621826"	"HCD"	"MS2"	"26.676"	"297.6"	"100.000"	"52.5125"	"15865"	"15865"	"15842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"446.3"	""	"442.9"	""	"345.4"	""	"520.5"	"1.3"	"548.9"	"513.8"	""	"1017"	"25"	"37.000"	"30.000"	"0.168380175273898"	"18"	"0.0006737"	"0.006478"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"717.91138"	"1434.81548"	"1434.81877"	"-2.29"	"-0.00164"	"8/82"	"8"	"82"	"1455136.98083496"	"HCD"	"MS2"	"22.4888"	"84.3"	"100.000"	"72.3965"	"24005"	"24005"	"23983"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.6"	""	"89.1"	""	"102.5"	""	"151.5"	"2.7"	"179.6"	"172.2"	""	"1007"	"11"	"37.000"	"30.000"	"4.20726119679433"	"19"	"0.002953"	"0.051"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"717.91174"	"1434.81621"	"1434.81877"	"-1.78"	"-0.00128"	"8/82"	"8"	"82"	"1324319.70483398"	"HCD"	"MS2"	"0"	"72.2"	"100.000"	"66.3578"	"21549"	"21549"	"21523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.6"	""	"89.7"	""	"97.0"	""	"119.7"	"1.0"	"142.9"	"156.7"	""	"998"	"50"	"36.000"	"29.000"	"0.000446787018009247"	"22"	"0.0001889"	"0.001066"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"717.91217"	"1434.81706"	"1434.81877"	"-1.19"	"-0.00085"	"6/82"	"6"	"82"	"1481817.1428833"	"HCD"	"MS2"	"21.92908"	"92.5"	"100.000"	"65.7870"	"21263"	"21263"	"21241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.6"	""	"107.3"	""	"126.5"	""	"155.9"	"1.3"	"190.5"	"193.3"	""	"1000"	"18"	"36.000"	"30.000"	"0.732773920477956"	"18"	"0.00103"	"0.01174"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"478.94394"	"1434.81726"	"1434.81877"	"-1.05"	"-0.00050"	"12/82"	"12"	"82"	"1633424.65301514"	"HCD"	"MS2"	"7.398737"	"27.5"	"100.000"	"64.2480"	"20688"	"20688"	"20659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.5"	""	"33.8"	""	"32.8"	""	"56.4"	""	"51.2"	"56.1"	""	"998"	"47"	"36.000"	"29.000"	"0.00106438941166014"	"22"	"0.0001859"	"0.0003203"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"717.91229"	"1434.81731"	"1434.81877"	"-1.02"	"-0.00073"	"7/82"	"7"	"82"	"533942.395690918"	"HCD"	"MS2"	"0"	"38.6"	"100.000"	"69.4492"	"22750"	"22750"	"22730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.8"	""	"49.5"	""	"48.7"	""	"56.7"	""	"82.0"	"85.4"	""	"998"	"12"	"36.000"	"29.000"	"3.11961173695067"	"18"	"0.001966"	"0.03057"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"717.91235"	"1434.81743"	"1434.81877"	"-0.93"	"-0.00067"	"8/82"	"8"	"82"	"1024125.20367432"	"HCD"	"MS2"	"0"	"62.7"	"100.000"	"66.7759"	"21667"	"21667"	"21641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.7"	""	"77.6"	""	"80.6"	""	"100.0"	""	"112.9"	"137.5"	""	"998"	"47"	"36.000"	"29.000"	"0.000893512321163611"	"21"	"0.0006737"	"0.006475"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"717.91235"	"1434.81743"	"1434.81877"	"-0.93"	"-0.00067"	"8/82"	"8"	"82"	"4806454.45678711"	"HCD"	"MS2"	"31.73904"	"174.0"	"100.000"	"64.0430"	"20604"	"20604"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.9"	""	"141.4"	""	"163.5"	""	"468.4"	""	"385.2"	"353.5"	""	"998"	"51"	"36.000"	"29.000"	"0.000383796089703018"	"21"	"0.0003146"	"0.001457"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"717.91248"	"1434.81767"	"1434.81877"	"-0.76"	"-0.00055"	"9/82"	"9"	"82"	"1735770.30145264"	"HCD"	"MS2"	"39.9379"	"83.0"	"100.000"	"65.7371"	"21296"	"21296"	"21267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.5"	""	"101.0"	""	"104.3"	""	"135.7"	"1.0"	"160.7"	"198.5"	""	"986"	"14"	"36.000"	"29.000"	"1.87433372386037"	"13"	"0.005603"	"0.1816"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"717.91254"	"1434.81780"	"1434.81877"	"-0.68"	"-0.00049"	"8/82"	"8"	"82"	"1207839.0100708"	"HCD"	"MS2"	"14.14119"	"69.7"	"100.000"	"66.4578"	"21537"	"21537"	"21513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.2"	""	"78.7"	""	"93.4"	""	"123.1"	""	"136.5"	"143.2"	""	"986"	"38"	"36.000"	"29.000"	"0.00854765370892791"	"22"	"0.0001889"	"0.0005927"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"478.94412"	"1434.81781"	"1434.81877"	"-0.66"	"-0.00032"	"12/82"	"12"	"82"	"1472972.20581055"	"HCD"	"MS2"	"18.39809"	"24.1"	"100.000"	"64.1968"	"20614"	"20614"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.5"	""	"23.4"	""	"27.5"	""	"48.6"	""	"50.9"	"54.4"	""	"986"	"58"	"36.000"	"29.000"	"8.35308535620533E-05"	"20"	"0.0001308"	"0.0003086"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"717.91260"	"1434.81792"	"1434.81877"	"-0.59"	"-0.00042"	"8/82"	"8"	"82"	"648457.854736328"	"HCD"	"MS2"	"15.03902"	"42.4"	"100.000"	"68.9969"	"22566"	"22566"	"22538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.0"	""	"56.9"	""	"57.2"	""	"64.5"	"1.2"	"81.2"	"93.8"	""	"985"	"28"	"36.000"	"29.000"	"0.0708608299791004"	"25"	"0.000523"	"0.002878"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"717.91284"	"1434.81841"	"1434.81877"	"-0.25"	"-0.00018"	"8/82"	"8"	"82"	"1068208.7366333"	"HCD"	"MS2"	"29.81993"	"63.4"	"100.000"	"66.7175"	"21696"	"21696"	"21667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.1"	""	"77.5"	""	"76.7"	""	"100.6"	""	"116.5"	"145.2"	""	"995"	"35"	"36.000"	"29.000"	"0.0166262032412992"	"21"	"0.0005564"	"0.003422"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"717.91315"	"1434.81902"	"1434.81877"	"0.17"	"0.00013"	"7/82"	"7"	"82"	"10463045.7585449"	"HCD"	"MS2"	"3.4125"	"310.1"	"100.000"	"64.2888"	"20651"	"20651"	"20633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.1"	""	"222.4"	""	"258.5"	""	"789.7"	""	"591.6"	"862.7"	""	"959"	"31"	"36.000"	"29.000"	"0.0362066723165575"	"14"	"0.0003839"	"0.001767"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"717.91345"	"1434.81963"	"1434.81877"	"0.60"	"0.00043"	"8/82"	"8"	"82"	"648696.469726563"	"HCD"	"MS2"	"0"	"43.4"	"100.000"	"68.8249"	"22547"	"22547"	"22522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.5"	""	"50.7"	""	"58.6"	""	"73.4"	"1.8"	"86.7"	"91.6"	""	"965"	"43"	"36.000"	"29.000"	"0.0026822380413297"	"21"	"0.0003839"	"0.001932"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"717.91345"	"1434.81963"	"1434.81877"	"0.60"	"0.00043"	"9/82"	"9"	"82"	"11884206.8446655"	"HCD"	"MS2"	"0.8236181"	"303.6"	"83.929"	"64.3357"	"20724"	"20724"	"20707"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.2"	""	"199.7"	""	"264.8"	""	"807.9"	""	"590.1"	"818.8"	""	"965"	"40"	"36.000"	"29.000"	"0.00504077505774036"	"18"	"0.0003839"	"0.001961"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTLIMQLLR"	"[K].dSTLImQLLR.[D]"	"N-Term(TMT6plex); M6(Oxidation)"	"4"	"6"	"P68255; P61983; P63102; P62260"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P35213; P68511; P68255; P61983; P63102; P62260"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"717.91394"	"1434.82060"	"1434.81877"	"1.28"	"0.00092"	"8/82"	"8"	"82"	"3807854.37597656"	"HCD"	"MS2"	"29.56448"	"154.4"	"100.000"	"63.9870"	"20528"	"20528"	"20505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.6"	""	"115.5"	""	"160.0"	""	"406.7"	""	"331.5"	"332.6"	""	"965"	"51"	"36.000"	"29.000"	"0.000393094817040055"	"22"	"0.0003839"	"0.001855"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILANADTMK"	"[K].iLANADTMk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"717.92316"	"1434.83904"	"1434.83906"	"-0.01"	"-0.00001"	"8/76"	"8"	"76"	"1090731.74523926"	"HCD"	"MS2"	"0"	"110.5"	"100.000"	"40.8021"	"11147"	"11147"	"11117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.0"	""	"153.5"	""	"171.5"	""	"136.3"	"3.2"	"206.2"	"197.7"	""	"848"	"58"	"36.000"	"29.000"	"6.35866370253006E-05"	"24"	"0"	"4.338E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILANADTMK"	"[K].iLANADTMk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"717.92407"	"1434.84087"	"1434.83906"	"1.26"	"0.00091"	"13/76"	"13"	"76"	"727962.718078613"	"HCD"	"MS2"	"0"	"89.2"	"100.000"	"40.6943"	"11059"	"11059"	"11029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.0"	""	"118.5"	""	"130.8"	""	"118.1"	""	"175.1"	"175.9"	""	"865"	"43"	"36.000"	"29.000"	"0.00242653249634044"	"23"	"0"	"8.269E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"717.93848"	"1434.86968"	"1434.87207"	"-1.67"	"-0.00120"	"14/70"	"14"	"70"	"16577880.7434082"	"HCD"	"MS2"	"5.667135"	"662.5"	"53.144"	"47.8717"	"13977"	"13977"	"13960"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"810.5"	""	"770.4"	""	"749.6"	""	"1222.1"	"8.0"	"1349.7"	"1381.2"	""	"537"	"44"	"34.000"	"27.000"	"0.00104458621430964"	""	"0.0003839"	"0.001976"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.5185"	"0.0000"	"1"	"1"	"1"	"478.96152"	"1434.87000"	"1434.87207"	"-1.44"	"-0.00069"	"6/70"	"6"	"70"	"10277519.5658569"	"HCD"	"MS2"	"7.355167"	"303.5"	"85.387"	"48.2108"	"14163"	"14163"	"14146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"377.6"	""	"343.6"	""	"365.8"	""	"560.8"	""	"609.8"	"626.1"	""	"535"	"27"	"34.000"	"27.000"	"0.0502717248494875"	""	"0.0004557"	"0.002535"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"717.93878"	"1434.87029"	"1434.87207"	"-1.24"	"-0.00089"	"14/70"	"14"	"70"	"17387050.5133667"	"HCD"	"MS2"	"0"	"839.6"	"66.519"	"48.1762"	"14149"	"14149"	"14130"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1045.1"	""	"956.0"	""	"1010.5"	""	"1586.2"	"6.3"	"1626.6"	"1737.2"	""	"535"	"44"	"34.000"	"27.000"	"0.00100074582362774"	""	"0.0003839"	"0.001747"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"717.93884"	"1434.87041"	"1434.87207"	"-1.16"	"-0.00083"	"14/70"	"14"	"70"	"21159925.4587402"	"HCD"	"MS2"	"0"	"837.5"	"52.731"	"48.1650"	"14097"	"14097"	"14080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1051.1"	""	"952.7"	""	"974.5"	""	"1484.7"	"4.0"	"1670.5"	"1814.9"	""	"535"	"46"	"34.000"	"27.000"	"0.000647625270001929"	""	"0.0002277"	"0.001236"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"478.96173"	"1434.87064"	"1434.87207"	"-1.00"	"-0.00048"	"6/70"	"6"	"70"	"10470531.5216064"	"HCD"	"MS2"	"12.01682"	"359.5"	"100.000"	"47.9952"	"14027"	"14027"	"14006"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"453.9"	""	"411.3"	""	"421.4"	""	"655.1"	""	"739.9"	"733.2"	""	"532"	"30"	"34.000"	"27.000"	"0.0279821858436977"	""	"0.0003839"	"0.001757"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"478.96182"	"1434.87091"	"1434.87207"	"-0.81"	"-0.00039"	"6/70"	"6"	"70"	"10708317.90802"	"HCD"	"MS2"	"2.271224"	"328.3"	"100.000"	"48.5223"	"14290"	"14290"	"14271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.3"	""	"357.4"	""	"397.0"	""	"563.7"	""	"647.1"	"729.4"	""	"542"	"33"	"34.000"	"27.000"	"0.0150997337960553"	""	"0.0002723"	"0.001366"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"717.93927"	"1434.87126"	"1434.87207"	"-0.56"	"-0.00040"	"14/70"	"14"	"70"	"22067648.8612061"	"HCD"	"MS2"	"0"	"697.4"	"42.413"	"48.4766"	"14272"	"14272"	"14255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"909.9"	""	"765.9"	""	"785.4"	""	"1204.1"	"9.7"	"1400.3"	"1548.1"	""	"542"	"46"	"34.000"	"27.000"	"0.0006729290715351"	""	"0.0003146"	"0.001407"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.4688"	"0.0000"	"1"	"1"	"1"	"478.96201"	"1434.87146"	"1434.87207"	"-0.42"	"-0.00020"	"6/70"	"6"	"70"	"8700303.47686768"	"HCD"	"MS2"	"8.9727"	"278.6"	"100.000"	"48.2935"	"14149"	"14149"	"14128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"327.4"	""	"325.6"	""	"345.9"	""	"478.5"	""	"559.8"	"608.7"	""	"539"	"32"	"34.000"	"27.000"	"0.015942586041029"	""	"0.0002277"	"0.001242"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"717.94000"	"1434.87273"	"1434.87207"	"0.46"	"0.00033"	"12/70"	"12"	"70"	"3878648.90258789"	"HCD"	"MS2"	"0"	"292.6"	"100.000"	"48.8027"	"14405"	"14405"	"14383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.3"	""	"347.4"	""	"397.4"	""	"432.8"	""	"626.1"	"633.6"	""	"517"	"22"	"34.000"	"27.000"	"0.157202897830549"	"21"	"0.0004166"	"0.002299"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"478.96246"	"1434.87284"	"1434.87207"	"0.53"	"0.00026"	"4/70"	"4"	"70"	"3253126.71789551"	"HCD"	"MS2"	"42.54231"	"132.5"	"100.000"	"48.8508"	"14425"	"14425"	"14399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.2"	""	"171.9"	""	"214.8"	""	"183.9"	""	"266.5"	"261.1"	""	"517"	"4"	"34.000"	"27.000"	"10.267401553785"	"14"	"0.004409"	"0.1293"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].qLFDQVVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"717.94037"	"1434.87346"	"1434.87207"	"0.97"	"0.00069"	"12/70"	"12"	"70"	"3966163.96746826"	"HCD"	"MS2"	"11.71186"	"304.2"	"100.000"	"48.5279"	"14245"	"14245"	"14224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"355.6"	""	"356.8"	""	"409.8"	""	"443.0"	""	"645.6"	"681.5"	""	"519"	"24"	"34.000"	"27.000"	"0.104024913224285"	"22"	"0.0005564"	"0.003618"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQFQAALGK"	"[R].dQFQAALGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"718.41748"	"1435.82768"	"1435.83094"	"-2.26"	"-0.00163"	"7/78"	"7"	"78"	"3550092.54931641"	"HCD"	"MS2"	"0"	"294.3"	"100.000"	"40.8826"	"11136"	"11136"	"11109"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"545.3"	""	"374.1"	""	"309.3"	""	"559.6"	"1.7"	"525.9"	"468.9"	""	"900"	"46"	"36.000"	"29.000"	"0.00118908394079487"	""	"0"	"0.00017"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQFQAALGK"	"[R].dQFQAALGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"718.41852"	"1435.82976"	"1435.83094"	"-0.82"	"-0.00059"	"14/78"	"14"	"78"	"3447966.70227051"	"HCD"	"MS2"	"0"	"274.0"	"100.000"	"41.0383"	"11244"	"11244"	"11213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"521.0"	""	"363.8"	""	"266.0"	""	"524.4"	"0.5"	"470.7"	"445.2"	""	"889"	"43"	"36.000"	"29.000"	"0.00210315734608378"	""	"0"	"0.0001514"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIISWMEK"	"[R].aIISWMEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"718.42206"	"1435.83684"	"1435.83833"	"-1.04"	"-0.00074"	"7/62"	"7"	"62"	"2373652.26245117"	"HCD"	"MS2"	"27.01721"	"182.7"	"100.000"	"61.6091"	"19610"	"19610"	"19587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.2"	""	"279.3"	""	"274.6"	""	"226.5"	""	"320.5"	"343.0"	""	"784"	"32"	"35.000"	"28.000"	"0.0238938463718146"	"24"	"0.0001889"	"0.001101"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITAFIVEK"	"[R].gITAFIVEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7091"	"0.0000"	"1"	"1"	"1"	"718.44891"	"1435.89055"	"1435.89247"	"-1.34"	"-0.00096"	"8/74"	"8"	"74"	"4988052.38562012"	"HCD"	"MS2"	"14.31757"	"366.6"	"100.000"	"57.6411"	"17994"	"17994"	"17973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"700.8"	""	"744.7"	""	"669.7"	""	"455.7"	"0.2"	"395.1"	"483.9"	""	"400"	"55"	"33.000"	"26.000"	"6.56190586226237E-05"	""	"0"	"0.000152"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAISELFAK"	"[K].vAISELFAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"718.44897"	"1435.89067"	"1435.89247"	"-1.25"	"-0.00090"	"8/66"	"8"	"66"	"7367531.88208008"	"HCD"	"MS2"	"11.55179"	"476.7"	"100.000"	"64.8495"	"20933"	"20933"	"20915"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"616.0"	""	"555.2"	""	"596.3"	""	"895.9"	""	"898.1"	"963.1"	""	"400"	"43"	"33.000"	"26.000"	"0.000968344735168199"	"23"	"0.0001889"	"0.0003802"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAISELFAK"	"[K].vAISELFAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"479.30176"	"1435.89072"	"1435.89247"	"-1.22"	"-0.00058"	"9/66"	"9"	"66"	"3172828.33178711"	"HCD"	"MS2"	"10.47366"	"100.8"	"100.000"	"64.9272"	"20912"	"20912"	"20889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.4"	""	"123.4"	""	"134.2"	""	"177.5"	"0.5"	"186.8"	"203.1"	""	"400"	"28"	"33.000"	"26.000"	"0.0354021791663484"	"17"	"0.0001889"	"0.0006973"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAISELFAK"	"[K].vAISELFAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"479.30188"	"1435.89109"	"1435.89247"	"-0.97"	"-0.00046"	"9/66"	"9"	"66"	"2593010.66625977"	"HCD"	"MS2"	"7.033993"	"89.3"	"100.000"	"64.9442"	"20972"	"20972"	"20947"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.6"	""	"100.9"	""	"122.8"	""	"165.8"	"3.1"	"177.0"	"171.8"	""	"398"	"24"	"32.000"	"25.000"	"0.0715901176959928"	"14"	"0.0008731"	"0.008872"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAISELFAK"	"[K].vAISELFAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"718.44940"	"1435.89153"	"1435.89247"	"-0.66"	"-0.00047"	"7/66"	"7"	"66"	"6286147.13433838"	"HCD"	"MS2"	"17.44206"	"410.3"	"100.000"	"64.8394"	"20876"	"20876"	"20857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"514.2"	""	"491.5"	""	"539.9"	""	"768.6"	""	"773.7"	"806.6"	""	"398"	"45"	"32.000"	"25.000"	"0.000697996229165612"	"25"	"0.0001859"	"0.0003203"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITAFIVEK"	"[R].gITAFIVEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"718.44965"	"1435.89202"	"1435.89247"	"-0.32"	"-0.00023"	"8/74"	"8"	"74"	"4817410.54754639"	"HCD"	"MS2"	"19.52848"	"355.4"	"100.000"	"57.4397"	"17858"	"17858"	"17835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"672.6"	""	"707.7"	""	"689.2"	""	"443.2"	"2.3"	"365.5"	"462.1"	""	"390"	"53"	"32.000"	"25.000"	"0.000100701192008054"	""	"0.0001308"	"0.0002503"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSVPGYK"	"[R].tLLSVPGYk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"718.44995"	"1435.89263"	"1435.89247"	"0.11"	"0.00008"	"13/70"	"13"	"70"	"6052555.43762207"	"HCD"	"MS2"	"38.81958"	"424.5"	"100.000"	"49.7222"	"14777"	"14777"	"14750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"573.2"	""	"584.6"	""	"601.6"	""	"666.9"	""	"820.6"	"781.2"	""	"390"	"47"	"32.000"	"25.000"	"0.000414987113966629"	"22"	"0.0001859"	"0.0003265"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSVPGYK"	"[R].tLLSVPGYk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"718.45032"	"1435.89336"	"1435.89247"	"0.62"	"0.00044"	"13/70"	"13"	"70"	"5000152.91650391"	"HCD"	"MS2"	"34.37243"	"355.2"	"100.000"	"49.4409"	"14619"	"14619"	"14591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"460.4"	""	"486.0"	""	"500.1"	""	"594.7"	""	"663.4"	"667.4"	""	"390"	"47"	"32.000"	"25.000"	"0.000404608135903707"	"22"	"0.0003146"	"0.001477"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGYVATLK"	"[R].lLGYVATLk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"718.46722"	"1435.92717"	"1435.92886"	"-1.17"	"-0.00084"	"7/64"	"7"	"64"	"1807204.43792725"	"HCD"	"MS2"	"57.04703"	"129.6"	"100.000"	"65.5783"	"21231"	"21231"	"21203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.8"	""	"146.0"	""	"172.8"	""	"213.2"	""	"260.3"	"293.3"	""	"164"	"38"	"29.000"	"22.000"	"0.00132072942084618"	"15"	"0.0001889"	"0.000788"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGYVATLK"	"[R].lLGYVATLk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"718.46783"	"1435.92839"	"1435.92886"	"-0.32"	"-0.00023"	"8/64"	"8"	"64"	"1640482.99493408"	"HCD"	"MS2"	"47.40195"	"122.7"	"100.000"	"65.6370"	"21202"	"21202"	"21177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.2"	""	"147.1"	""	"171.5"	""	"204.8"	""	"218.3"	"265.9"	""	"161"	"40"	"29.000"	"22.000"	"0.000882664947895264"	"15"	"0.0001308"	"0.0002316"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFTLLDVVNR"	"[K].mFTLLDVVNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"718.90948"	"1436.81169"	"1436.81329"	"-1.11"	"-0.00080"	"16/80"	"16"	"80"	"800399.604553223"	"HCD"	"MS2"	"24.29792"	"53.7"	"100.000"	"73.2791"	"24314"	"24314"	"24289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.3"	""	"73.4"	""	"68.4"	""	"68.8"	"0.1"	"105.6"	"118.8"	""	"962"	"25"	"36.000"	"29.000"	"0.137766960352507"	"17"	"0"	"8.402E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYGPVMQR"	"[R].kYGPVMQR.[Y]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"1"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"479.61890"	"1436.84214"	"1436.84481"	"-1.86"	"-0.00089"	"6/72"	"6"	"72"	"3198176.5546875"	"HCD"	"MS2"	"21.68468"	"289.2"	"100.000"	"28.3676"	"6065"	"6065"	"6046"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"421.4"	""	"409.2"	""	"432.6"	""	"424.9"	""	"523.1"	"527.7"	""	"760"	"0"	"35.000"	"28.000"	"35.6273562631834"	"13"	"0.0003146"	"0.001455"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLDFSQK"	"[R].qLLDFSQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"718.92822"	"1436.84917"	"1436.85134"	"-1.51"	"-0.00108"	"14/74"	"14"	"74"	"3468277.72631836"	"HCD"	"MS2"	"12.10929"	"306.3"	"100.000"	"49.1113"	"14531"	"14531"	"14511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"496.5"	""	"373.0"	""	"404.1"	""	"480.4"	"0.8"	"581.3"	"566.2"	""	"664"	"45"	"35.000"	"28.000"	"0.00101891530014586"	""	"0.0001889"	"0.0006613"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLEEFIK"	"[K].lSLEEFIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"718.94135"	"1436.87541"	"1436.87649"	"-0.75"	"-0.00054"	"14/62"	"14"	"62"	"1745743.92852783"	"HCD"	"MS2"	"18.68344"	"115.7"	"100.000"	"68.6176"	"22462"	"22462"	"22442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.5"	""	"133.9"	""	"145.7"	""	"226.2"	"0.8"	"218.8"	"245.4"	""	"467"	"44"	"33.000"	"26.000"	"0.000900091965149577"	""	"0.0001889"	"0.0004388"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLEEFIK"	"[K].lSLEEFIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"718.94135"	"1436.87541"	"1436.87649"	"-0.75"	"-0.00054"	"7/62"	"7"	"62"	"7380346.24761963"	"HCD"	"MS2"	"14.50983"	"504.6"	"100.000"	"68.4596"	"22347"	"22347"	"22330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"520.4"	""	"565.9"	""	"599.0"	""	"1004.7"	""	"1021.4"	"1087.1"	""	"467"	"39"	"33.000"	"26.000"	"0.00293282996522754"	"26"	"0.0001889"	"0.000686"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLEEFIK"	"[K].lSLEEFIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"718.94183"	"1436.87639"	"1436.87649"	"-0.07"	"-0.00005"	"7/62"	"7"	"62"	"7099179.68341064"	"HCD"	"MS2"	"21.39934"	"476.0"	"100.000"	"68.3085"	"22336"	"22336"	"22314"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"498.4"	""	"540.4"	""	"578.8"	""	"953.6"	""	"961.5"	"987.9"	""	"458"	"42"	"33.000"	"26.000"	"0.00147854818448936"	""	"0.0002277"	"0.001163"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLEEFIK"	"[K].lSLEEFIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"718.94263"	"1436.87798"	"1436.87649"	"1.04"	"0.00074"	"7/62"	"7"	"62"	"1293167.22540283"	"HCD"	"MS2"	"22.75197"	"92.5"	"100.000"	"68.7848"	"22479"	"22479"	"22458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.9"	""	"112.3"	""	"122.1"	""	"169.2"	""	"185.0"	"201.1"	""	"448"	"26"	"33.000"	"26.000"	"0.0598753435540581"	"18"	"0.0001889"	"0.0004562"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HILILQNK"	"[K].hILILQNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"P81795; C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3 PE=1 SV=2; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"479.64917"	"1436.93296"	"1436.93534"	"-1.66"	"-0.00079"	"9/62"	"9"	"62"	"6694365.03930664"	"HCD"	"MS2"	"29.27226"	"294.0"	"100.000"	"36.9939"	"9544"	"9544"	"9514"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.6"	""	"369.6"	""	"429.8"	""	"466.7"	"10.9"	"552.1"	"525.4"	""	"90"	"25"	"26.000"	"19.000"	"0.0128295822037676"	"14"	"0.0002277"	"0.001178"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RSPPIPLAK"	"[K].rSPPIPLAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"479.64941"	"1436.93369"	"1436.93534"	"-1.15"	"-0.00055"	"8/80"	"8"	"80"	"12750635.3547363"	"HCD"	"MS2"	"14.2583"	"294.5"	"56.986"	"33.7654"	"8223"	"8223"	"8204"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"436.8"	""	"404.5"	""	"436.2"	""	"490.9"	"29.7"	"503.7"	"484.9"	""	"90"	"23"	"26.000"	"19.000"	"0.022501554073964"	"14"	"0.0001308"	"0.0002169"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RSPPIPLAK"	"[K].rSPPIPLAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"1"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"479.64954"	"1436.93406"	"1436.93534"	"-0.89"	"-0.00043"	"6/80"	"6"	"80"	"11601456.619751"	"HCD"	"MS2"	"17.13155"	"310.3"	"64.584"	"33.8228"	"8290"	"8290"	"8266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"476.8"	""	"430.9"	""	"449.1"	""	"522.3"	"44.2"	"513.8"	"498.5"	""	"88"	"22"	"26.000"	"19.000"	"0.0280190029199483"	"17"	"0.0001889"	"0.0004144"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLLGLPAPK"	"[R].lGLLGLPAPk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"718.98517"	"1436.96306"	"1436.96049"	"1.79"	"0.00128"	"12/74"	"12"	"74"	"1238251.78027344"	"HCD"	"MS2"	"64.40714"	"79.9"	"100.000"	"65.3867"	"21153"	"21153"	"21123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.8"	""	"94.3"	""	"107.6"	""	"151.9"	""	"150.2"	"167.9"	""	"44"	"42"	"23.000"	"16.000"	"0.000126596786214175"	"15"	"7.476E-05"	"0.0001932"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLLGLPAPK"	"[R].lGLLGLPAPk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"O08837"	"Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"718.98541"	"1436.96355"	"1436.96049"	"2.13"	"0.00153"	"13/74"	"13"	"74"	"1516701.92425537"	"HCD"	"MS2"	"30.1728"	"119.3"	"100.000"	"65.5540"	"21168"	"21168"	"21145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.2"	""	"147.5"	""	"170.0"	""	"216.2"	""	"225.0"	"240.8"	""	"44"	"26"	"23.000"	"16.000"	"0.0061294665709855"	"14"	"0.0006037"	"0.004034"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].DFQLFGSPLGk.[D]"	"K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.39795"	"1437.78862"	"1437.79393"	"-3.69"	"-0.00265"	"7/108"	"7"	"108"	"1885013.46783447"	"HCD"	"MS2"	"100"	"100.6"	"100.000"	"67.1674"	"21874"	"21874"	"21862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.7"	""	"139.3"	""	"147.0"	""	"168.1"	""	"171.7"	"188.7"	""	"938"	"14"	"36.000"	"29.000"	"1.6911138357715"	"13"	"0.001587"	"0.02113"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLALDSEGK"	"[R].fLALDSEGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"M0RAU5"	"Ciliogenesis-associated TTC17-interacting protein OS=Rattus norvegicus OX=10116 GN=Catip PE=1 SV=1"	"M0RAU5"	"Ciliogenesis-associated TTC17-interacting protein OS=Rattus norvegicus OX=10116 GN=Catip PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"719.42023"	"1437.83318"	"1437.83535"	"-1.51"	"-0.00109"	"10/68"	"10"	"68"	"1375855.90637207"	"HCD"	"MS2"	"0"	"126.7"	"100.000"	"41.7880"	"11551"	"11551"	"11522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.9"	""	"176.6"	""	"152.3"	""	"218.4"	""	"234.7"	"232.9"	""	"738"	"11"	"35.000"	"28.000"	"2.9378280030399"	"19"	"0.008989"	"0.4005"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"719.42145"	"1437.83562"	"1437.83535"	"0.19"	"0.00013"	"14/72"	"14"	"72"	"6507018.92102051"	"HCD"	"MS2"	"0"	"518.9"	"100.000"	"40.4077"	"10941"	"10941"	"10917"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"813.8"	""	"703.8"	""	"694.5"	""	"806.6"	"1.4"	"929.7"	"964.2"	""	"718"	"44"	"35.000"	"28.000"	"0.00155630405341123"	"25"	"0.0001889"	"0.0006211"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"719.42145"	"1437.83562"	"1437.83535"	"0.19"	"0.00013"	"14/72"	"14"	"72"	"5887172.43792725"	"HCD"	"MS2"	"0"	"452.8"	"100.000"	"40.5518"	"11044"	"11044"	"11021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"729.1"	""	"649.0"	""	"634.3"	""	"720.5"	"4.1"	"756.0"	"790.9"	""	"718"	"45"	"35.000"	"28.000"	"0.0010235155580339"	"25"	"0.0001889"	"0.0008493"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLALDSEGK"	"[R].fLALDSEGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"M0RAU5"	"Ciliogenesis-associated TTC17-interacting protein OS=Rattus norvegicus OX=10116 GN=Catip PE=1 SV=1"	"M0RAU5"	"Ciliogenesis-associated TTC17-interacting protein OS=Rattus norvegicus OX=10116 GN=Catip PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"719.42175"	"1437.83623"	"1437.83535"	"0.61"	"0.00044"	"5/68"	"5"	"68"	"1289578.26287842"	"HCD"	"MS2"	"0"	"121.7"	"100.000"	"41.5220"	"11398"	"11398"	"11371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"179.1"	""	"155.0"	""	"157.6"	""	"207.4"	"3.9"	"220.5"	"229.9"	""	"709"	"14"	"35.000"	"28.000"	"1.38553097558407"	"21"	"0.007254"	"0.2698"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLLDFASK"	"[R].wLLDFASk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"719.42877"	"1437.85027"	"1437.85061"	"-0.24"	"-0.00017"	"14/62"	"14"	"62"	"1161469.22650146"	"HCD"	"MS2"	"16.72775"	"96.1"	"100.000"	"74.5939"	"24902"	"24902"	"24879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.5"	""	"131.2"	""	"132.5"	""	"122.4"	""	"148.1"	"161.5"	""	"613"	"45"	"34.000"	"27.000"	"0.000969238102841608"	"22"	"0.0001308"	"0.0003033"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEMLLFGK"	"[K].aAEMLLFGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"719.42975"	"1437.85222"	"1437.85398"	"-1.22"	"-0.00088"	"8/64"	"8"	"64"	"6901225.69775391"	"HCD"	"MS2"	"32.13293"	"452.5"	"100.000"	"63.6252"	"20380"	"20380"	"20361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"691.1"	""	"722.8"	""	"718.2"	""	"506.1"	""	"771.5"	"874.3"	""	"607"	"56"	"34.000"	"27.000"	"8.33985875466577E-05"	"21"	"0"	"0.0001779"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLLDFASK"	"[R].wLLDFASk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"719.42981"	"1437.85234"	"1437.85061"	"1.21"	"0.00087"	"14/62"	"14"	"62"	"1181841.34429932"	"HCD"	"MS2"	"11.19849"	"99.1"	"100.000"	"74.6057"	"24855"	"24855"	"24833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"202.3"	""	"141.7"	""	"155.6"	""	"116.3"	"2.1"	"152.9"	"164.3"	""	"602"	"45"	"34.000"	"27.000"	"0.000906914813280021"	"23"	"0.0001308"	"0.0003053"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEMLLFGK"	"[K].aAEMLLFGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"479.95566"	"1437.85242"	"1437.85398"	"-1.08"	"-0.00052"	"9/64"	"9"	"64"	"3486984.79223633"	"HCD"	"MS2"	"9.744677"	"113.1"	"100.000"	"63.6996"	"20464"	"20464"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.3"	""	"176.9"	""	"157.7"	""	"123.7"	""	"202.9"	"238.9"	""	"602"	"36"	"34.000"	"27.000"	"0.00743988967649854"	"17"	"0.0003146"	"0.001443"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEMLLFGK"	"[K].aAEMLLFGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"719.42999"	"1437.85271"	"1437.85398"	"-0.88"	"-0.00064"	"8/64"	"8"	"64"	"6712724.21459961"	"HCD"	"MS2"	"44.30243"	"451.3"	"100.000"	"63.6812"	"20456"	"20456"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"699.5"	""	"717.1"	""	"697.7"	""	"509.7"	"0.2"	"762.0"	"885.3"	""	"602"	"60"	"34.000"	"27.000"	"3.30800757669188E-05"	"23"	"0"	"0.0001663"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEMLLFGK"	"[K].aAEMLLFGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"479.95615"	"1437.85389"	"1437.85398"	"-0.06"	"-0.00003"	"9/64"	"9"	"64"	"2469947.29022217"	"HCD"	"MS2"	"20.77567"	"87.1"	"100.000"	"63.7290"	"20423"	"20423"	"20393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.3"	""	"136.8"	""	"121.3"	""	"105.5"	""	"164.3"	"182.5"	""	"599"	"36"	"34.000"	"27.000"	"0.00780542988224669"	"16"	"0.0001889"	"0.0006632"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPQLQPGK"	"[R].vLPQLQPGk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"719.46191"	"1437.91655"	"1437.91936"	"-1.95"	"-0.00140"	"8/76"	"8"	"76"	"2574583.45410156"	"HCD"	"MS2"	"0"	"141.0"	"100.000"	"43.3902"	"12200"	"12200"	"12185"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.9"	""	"207.9"	""	"227.6"	""	"207.6"	"0.1"	"225.6"	"244.7"	""	"133"	"37"	"28.000"	"21.000"	"0.00124400362334326"	"19"	"0.0001889"	"0.0008008"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLLGPPGAGK"	"[R].aVLLGPPGAGk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"479.97723"	"1437.91715"	"1437.91936"	"-1.54"	"-0.00074"	"8/82"	"8"	"82"	"6451673.80834961"	"HCD"	"MS2"	"20.30308"	"176.7"	"81.089"	"42.9688"	"12032"	"12032"	"12003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.2"	""	"225.0"	""	"249.4"	""	"291.3"	""	"349.6"	"357.4"	""	"119"	"15"	"27.000"	"20.000"	"0.193872837096195"	"13"	"0.003507"	"0.08186"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPQLQPGK"	"[R].vLPQLQPGk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"719.46301"	"1437.91875"	"1437.91936"	"-0.42"	"-0.00030"	"8/76"	"8"	"76"	"2467039.77319336"	"HCD"	"MS2"	"0"	"145.8"	"100.000"	"42.9713"	"11987"	"11987"	"11966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.6"	""	"200.5"	""	"223.0"	""	"203.5"	"2.4"	"253.9"	"273.7"	""	"118"	"44"	"27.000"	"20.000"	"0.000252843627034489"	""	"0.0001889"	"0.0004569"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLLGPPGAGK"	"[R].aVLLGPPGAGk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.46307"	"1437.91887"	"1437.91936"	"-0.34"	"-0.00024"	"10/82"	"10"	"82"	"5270483.0581665"	"HCD"	"MS2"	"7.580261"	"298.6"	"100.000"	"42.6713"	"11866"	"11866"	"11836"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"357.5"	""	"322.9"	"3.1"	"411.1"	""	"518.3"	"0.0"	"589.1"	"633.0"	""	"118"	"63"	"27.000"	"20.000"	"2.87641809160998E-06"	"16"	"0"	"2.553E-05"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLLGPPGAGK"	"[R].aVLLGPPGAGk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"0"	"2"	"2"	"0.9851"	"0.0000"	"1"	"1"	"1"	"719.46399"	"1437.92070"	"1437.91936"	"0.94"	"0.00067"	"10/82"	"10"	"82"	"7863892.26055908"	"HCD"	"MS2"	"0"	"420.0"	"100.000"	"42.8955"	"12002"	"12002"	"11971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"537.8"	""	"450.8"	""	"580.4"	""	"685.7"	"5.6"	"825.5"	"900.3"	""	"118"	"67"	"27.000"	"20.000"	"1.27014122348738E-06"	"18"	"0"	"9.626E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDSASASMAK"	"[R].lDSASASMAk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.90186"	"1438.79643"	"1438.79759"	"-0.80"	"-0.00058"	"7/82"	"7"	"82"	"403195.614868164"	"HCD"	"MS2"	"0"	"48.0"	"100.000"	"35.7171"	"9063"	"9063"	"9033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.0"	""	"66.2"	""	"62.9"	""	"64.3"	""	"94.4"	"83.4"	""	"830"	"12"	"36.000"	"29.000"	"2.4268788491996"	"13"	"0.0008125"	"0.007593"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"719.98859"	"1438.96990"	"1438.97614"	"-4.34"	"-0.00312"	"11/80"	"11"	"80"	"2264402.55133057"	"HCD"	"MS2"	"19.78947"	"122.6"	"100.000"	"67.1917"	"21836"	"21836"	"21821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.2"	""	"171.6"	""	"189.8"	""	"204.2"	""	"202.4"	"209.9"	""	"42"	"28"	"23.000"	"16.000"	"0.00322269566387852"	"14"	"0.0001889"	"0.0005843"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"719.98859"	"1438.96990"	"1438.97614"	"-4.34"	"-0.00312"	"11/80"	"11"	"80"	"2264402.55133057"	"HCD"	"MS2"	"19.78947"	"122.6"	"100.000"	"67.1917"	"21836"	"21836"	"21821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.2"	""	"171.6"	""	"189.8"	""	"204.2"	""	"202.4"	"209.9"	""	"42"	"28"	"23.000"	"16.000"	"0.00322269566387852"	"14"	"0.0001889"	"0.0005843"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"719.98999"	"1438.97270"	"1438.97614"	"-2.39"	"-0.00172"	"9/80"	"9"	"80"	"1434796.27874756"	"HCD"	"MS2"	"100"	"85.7"	"100.000"	"67.1422"	"21864"	"21864"	"21852"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.0"	""	"119.5"	""	"132.8"	""	"127.8"	"0.3"	"140.3"	"162.1"	""	"33"	"17"	"22.000"	"15.000"	"0.0307952648987721"	"14"	"0.000523"	"0.003073"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"719.98999"	"1438.97270"	"1438.97614"	"-2.39"	"-0.00172"	"9/80"	"9"	"80"	"1434796.27874756"	"HCD"	"MS2"	"100"	"85.7"	"100.000"	"67.1422"	"21864"	"21864"	"21852"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.0"	""	"119.5"	""	"132.8"	""	"127.8"	"0.3"	"140.3"	"162.1"	""	"33"	"17"	"22.000"	"15.000"	"0.0307952648987721"	"14"	"0.000523"	"0.003073"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"480.32922"	"1438.97312"	"1438.97614"	"-2.10"	"-0.00101"	"10/80"	"10"	"80"	"2825808.23504639"	"HCD"	"MS2"	"7.977254"	"80.4"	"100.000"	"64.7852"	"20907"	"20907"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.9"	""	"107.0"	""	"120.6"	""	"131.4"	""	"144.9"	"158.3"	""	"33"	"39"	"22.000"	"15.000"	"0.00019031978754048"	"15"	"0.0001889"	"0.001099"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"480.32922"	"1438.97312"	"1438.97614"	"-2.10"	"-0.00101"	"10/80"	"10"	"80"	"2825808.23504639"	"HCD"	"MS2"	"7.977254"	"80.4"	"100.000"	"64.7852"	"20907"	"20907"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.9"	""	"107.0"	""	"120.6"	""	"131.4"	""	"144.9"	"158.3"	""	"33"	"39"	"22.000"	"15.000"	"0.00019031978754048"	"15"	"0.0001889"	"0.001099"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"719.99060"	"1438.97392"	"1438.97614"	"-1.54"	"-0.00111"	"7/80"	"7"	"80"	"9483015.66656494"	"HCD"	"MS2"	"17.43918"	"433.9"	"100.000"	"64.4279"	"20761"	"20761"	"20739"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"632.5"	""	"613.8"	""	"638.7"	""	"726.4"	"0.8"	"733.5"	"759.9"	""	"33"	"46"	"22.000"	"15.000"	"4.31006623475869E-05"	""	"0.0001889"	"0.0006744"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"719.99060"	"1438.97392"	"1438.97614"	"-1.54"	"-0.00111"	"7/80"	"7"	"80"	"9483015.66656494"	"HCD"	"MS2"	"17.43918"	"433.9"	"100.000"	"64.4279"	"20761"	"20761"	"20739"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"632.5"	""	"613.8"	""	"638.7"	""	"726.4"	"0.8"	"733.5"	"759.9"	""	"33"	"46"	"22.000"	"15.000"	"4.31006623475869E-05"	""	"0.0001889"	"0.0006744"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"480.32962"	"1438.97431"	"1438.97614"	"-1.28"	"-0.00061"	"9/80"	"9"	"80"	"17576061.085144"	"HCD"	"MS2"	"8.774364"	"475.3"	"100.000"	"66.8584"	"21753"	"21753"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"724.2"	""	"703.2"	""	"760.9"	""	"784.1"	""	"720.0"	"800.2"	""	"33"	"30"	"22.000"	"15.000"	"0.00174374889020254"	"14"	"0.0003839"	"0.001965"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"480.32962"	"1438.97431"	"1438.97614"	"-1.28"	"-0.00061"	"9/80"	"9"	"80"	"17576061.085144"	"HCD"	"MS2"	"8.774364"	"475.3"	"100.000"	"66.8584"	"21753"	"21753"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"724.2"	""	"703.2"	""	"760.9"	""	"784.1"	""	"720.0"	"800.2"	""	"33"	"30"	"22.000"	"15.000"	"0.00174374889020254"	"14"	"0.0003839"	"0.001965"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"719.99103"	"1438.97478"	"1438.97614"	"-0.95"	"-0.00068"	"8/80"	"8"	"80"	"9031498.87713623"	"HCD"	"MS2"	"6.330163"	"386.6"	"86.593"	"64.6802"	"20811"	"20811"	"20793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"526.9"	""	"512.6"	""	"548.1"	""	"634.9"	""	"691.0"	"752.8"	""	"33"	"43"	"22.000"	"15.000"	"9.15132426380552E-05"	""	"0.0001889"	"0.0003825"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"719.99103"	"1438.97478"	"1438.97614"	"-0.95"	"-0.00068"	"8/80"	"8"	"80"	"9031498.87713623"	"HCD"	"MS2"	"6.330163"	"386.6"	"86.593"	"64.6802"	"20811"	"20811"	"20793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"526.9"	""	"512.6"	""	"548.1"	""	"634.9"	""	"691.0"	"752.8"	""	"33"	"43"	"22.000"	"15.000"	"9.15132426380552E-05"	""	"0.0001889"	"0.0003825"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"480.32990"	"1438.97513"	"1438.97614"	"-0.70"	"-0.00034"	"10/80"	"10"	"80"	"11457557.0857544"	"HCD"	"MS2"	"13.30755"	"310.3"	"100.000"	"64.4525"	"20718"	"20718"	"20697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.9"	""	"445.2"	""	"465.9"	""	"517.8"	""	"512.1"	"567.6"	""	"33"	"39"	"22.000"	"15.000"	"0.000186416325921012"	"15"	"0.0001889"	"0.0008238"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"480.32990"	"1438.97513"	"1438.97614"	"-0.70"	"-0.00034"	"10/80"	"10"	"80"	"11457557.0857544"	"HCD"	"MS2"	"13.30755"	"310.3"	"100.000"	"64.4525"	"20718"	"20718"	"20697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.9"	""	"445.2"	""	"465.9"	""	"517.8"	""	"512.1"	"567.6"	""	"33"	"39"	"22.000"	"15.000"	"0.000186416325921012"	"15"	"0.0001889"	"0.0008238"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"480.32993"	"1438.97522"	"1438.97614"	"-0.64"	"-0.00031"	"10/80"	"10"	"80"	"12579025.8187866"	"HCD"	"MS2"	"15.64167"	"326.1"	"100.000"	"64.4718"	"20779"	"20779"	"20755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"445.3"	""	"458.6"	""	"472.0"	""	"535.9"	""	"573.2"	"606.9"	""	"33"	"36"	"22.000"	"15.000"	"0.000395807431638216"	"15"	"0.0001889"	"0.0007368"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"480.32993"	"1438.97522"	"1438.97614"	"-0.64"	"-0.00031"	"10/80"	"10"	"80"	"12579025.8187866"	"HCD"	"MS2"	"15.64167"	"326.1"	"100.000"	"64.4718"	"20779"	"20779"	"20755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"445.3"	""	"458.6"	""	"472.0"	""	"535.9"	""	"573.2"	"606.9"	""	"33"	"36"	"22.000"	"15.000"	"0.000395807431638216"	"15"	"0.0001889"	"0.0007368"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"719.99127"	"1438.97527"	"1438.97614"	"-0.61"	"-0.00044"	"7/80"	"7"	"80"	"5532992.59710693"	"HCD"	"MS2"	"30.48834"	"271.9"	"100.000"	"64.3765"	"20687"	"20687"	"20665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.0"	""	"354.3"	""	"388.1"	""	"460.8"	""	"473.2"	"521.9"	""	"33"	"44"	"22.000"	"15.000"	"7.18594591581189E-05"	""	"0.0001889"	"0.0005046"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"719.99127"	"1438.97527"	"1438.97614"	"-0.61"	"-0.00044"	"7/80"	"7"	"80"	"5532992.59710693"	"HCD"	"MS2"	"30.48834"	"271.9"	"100.000"	"64.3765"	"20687"	"20687"	"20665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.0"	""	"354.3"	""	"388.1"	""	"460.8"	""	"473.2"	"521.9"	""	"33"	"44"	"22.000"	"15.000"	"7.18594591581189E-05"	""	"0.0001889"	"0.0005046"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"719.99127"	"1438.97527"	"1438.97614"	"-0.61"	"-0.00044"	"7/80"	"7"	"80"	"22416116.3308716"	"HCD"	"MS2"	"0.6047465"	"620.4"	"93.054"	"66.8445"	"21748"	"21748"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"934.2"	""	"887.1"	""	"976.1"	""	"1014.9"	""	"978.4"	"1080.0"	""	"33"	"46"	"22.000"	"15.000"	"4.2902632792227E-05"	""	"0.0001889"	"0.000591"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"719.99127"	"1438.97527"	"1438.97614"	"-0.61"	"-0.00044"	"7/80"	"7"	"80"	"22416116.3308716"	"HCD"	"MS2"	"0.6047465"	"620.4"	"93.054"	"66.8445"	"21748"	"21748"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"934.2"	""	"887.1"	""	"976.1"	""	"1014.9"	""	"978.4"	"1080.0"	""	"33"	"46"	"22.000"	"15.000"	"4.2902632792227E-05"	""	"0.0001889"	"0.000591"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"719.99164"	"1438.97600"	"1438.97614"	"-0.10"	"-0.00007"	"7/80"	"7"	"80"	"6145099.55908203"	"HCD"	"MS2"	"10.85091"	"306.4"	"100.000"	"64.7320"	"20885"	"20885"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"424.5"	""	"411.2"	""	"436.7"	""	"485.9"	"0.3"	"552.6"	"591.6"	""	"33"	"44"	"22.000"	"15.000"	"7.18594591581189E-05"	""	"0.0001889"	"0.0006024"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"719.99164"	"1438.97600"	"1438.97614"	"-0.10"	"-0.00007"	"7/80"	"7"	"80"	"6145099.55908203"	"HCD"	"MS2"	"10.85091"	"306.4"	"100.000"	"64.7320"	"20885"	"20885"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"424.5"	""	"411.2"	""	"436.7"	""	"485.9"	"0.3"	"552.6"	"591.6"	""	"33"	"44"	"22.000"	"15.000"	"7.18594591581189E-05"	""	"0.0001889"	"0.0006024"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"480.33020"	"1438.97605"	"1438.97614"	"-0.07"	"-0.00003"	"9/80"	"9"	"80"	"15320666.9020386"	"HCD"	"MS2"	"11.2394"	"416.7"	"100.000"	"66.9191"	"21725"	"21725"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"647.2"	""	"612.6"	""	"651.5"	""	"668.2"	""	"649.2"	"711.0"	""	"33"	"30"	"22.000"	"15.000"	"0.00172776210428398"	"14"	"0.0001889"	"0.0007608"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"480.33020"	"1438.97605"	"1438.97614"	"-0.07"	"-0.00003"	"9/80"	"9"	"80"	"15320666.9020386"	"HCD"	"MS2"	"11.2394"	"416.7"	"100.000"	"66.9191"	"21725"	"21725"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"647.2"	""	"612.6"	""	"651.5"	""	"668.2"	""	"649.2"	"711.0"	""	"33"	"30"	"22.000"	"15.000"	"0.00172776210428398"	"14"	"0.0001889"	"0.0007608"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"480.33035"	"1438.97651"	"1438.97614"	"0.25"	"0.00012"	"9/80"	"9"	"80"	"2159488.68457031"	"HCD"	"MS2"	"4.252588"	"65.5"	"100.000"	"64.8029"	"20861"	"20861"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.7"	""	"79.6"	""	"104.6"	""	"97.1"	""	"127.0"	"130.2"	""	"33"	"37"	"22.000"	"15.000"	"0.000332264501227294"	"15"	"0.0001889"	"0.0008067"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"480.33035"	"1438.97651"	"1438.97614"	"0.25"	"0.00012"	"9/80"	"9"	"80"	"2159488.68457031"	"HCD"	"MS2"	"4.252588"	"65.5"	"100.000"	"64.8029"	"20861"	"20861"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.7"	""	"79.6"	""	"104.6"	""	"97.1"	""	"127.0"	"130.2"	""	"33"	"37"	"22.000"	"15.000"	"0.000332264501227294"	"15"	"0.0001889"	"0.0008067"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPIIAK"	"[K].vNIIPIIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"719.99207"	"1438.97685"	"1438.97614"	"0.49"	"0.00036"	"7/80"	"7"	"80"	"17168283.8010254"	"HCD"	"MS2"	"5.3534"	"851.5"	"100.000"	"66.9096"	"21722"	"21722"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1404.9"	""	"1218.8"	""	"1330.7"	""	"1319.0"	""	"1335.2"	"1440.6"	""	"33"	"46"	"22.000"	"15.000"	"4.34994678661188E-05"	""	"0.0001889"	"0.0004977"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIIPLIAK"	"[K].vNIIPLIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"3"	"2"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0; Q5PQK1"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1; Septin-10 OS=Rattus norvegicus OX=10116 GN=Sept10 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"719.99207"	"1438.97685"	"1438.97614"	"0.49"	"0.00036"	"7/80"	"7"	"80"	"17168283.8010254"	"HCD"	"MS2"	"5.3534"	"851.5"	"100.000"	"66.9096"	"21722"	"21722"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1404.9"	""	"1218.8"	""	"1330.7"	""	"1319.0"	""	"1335.2"	"1440.6"	""	"33"	"46"	"22.000"	"15.000"	"4.34994678661188E-05"	""	"0.0001889"	"0.0004977"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAWVFDDK"	"[R].tAWVFDDk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"720.39868"	"1439.79009"	"1439.79349"	"-2.36"	"-0.00170"	"14/68"	"14"	"68"	"1658470.78887939"	"HCD"	"MS2"	"47.69042"	"148.7"	"100.000"	"50.6905"	"15170"	"15170"	"15146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"200.8"	""	"205.1"	""	"203.0"	""	"226.9"	"5.8"	"270.0"	"298.4"	""	"890"	"27"	"36.000"	"29.000"	"0.0796819605045706"	"27"	"0.0001889"	"0.0004421"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAWVFDDK"	"[R].tAWVFDDk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"720.39935"	"1439.79143"	"1439.79349"	"-1.43"	"-0.00103"	"7/68"	"7"	"68"	"1462383.22723389"	"HCD"	"MS2"	"47.72882"	"139.0"	"100.000"	"50.4465"	"15020"	"15020"	"14999"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.5"	""	"177.7"	""	"199.3"	""	"214.0"	"1.9"	"264.4"	"285.0"	""	"852"	"26"	"36.000"	"29.000"	"0.0984939600614804"	"28"	"0.0001859"	"0.0003192"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYPPTSMSK"	"[K].aYPPTSMSk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"720.40088"	"1439.79448"	"1439.79686"	"-1.65"	"-0.00119"	"7/70"	"7"	"70"	"388423.052246094"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"34.6253"	"8572"	"8572"	"8547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.7"	""	"46.2"	""	"56.4"	""	"54.3"	"0.2"	"74.3"	"75.3"	""	"835"	"35"	"36.000"	"29.000"	"0.0126956949821985"	"22"	"0.0004166"	"0.00247"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDLVSWFK"	"[K].sDLVSWFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.41840"	"1439.82952"	"1439.82987"	"-0.25"	"-0.00018"	"14/64"	"14"	"64"	"2136508.7699585"	"HCD"	"MS2"	"14.40956"	"162.9"	"100.000"	"66.4983"	"21606"	"21606"	"21587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.1"	""	"213.2"	""	"235.2"	""	"255.7"	""	"286.3"	"305.8"	""	"640"	"40"	"35.000"	"28.000"	"0.00345262951113545"	"15"	"0.0001859"	"0.0003235"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDLVSWFK"	"[K].sDLVSWFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"720.41870"	"1439.83013"	"1439.82987"	"0.18"	"0.00013"	"14/64"	"14"	"64"	"1936725.40429688"	"HCD"	"MS2"	"14.47804"	"160.6"	"100.000"	"66.5708"	"21583"	"21583"	"21561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.8"	""	"199.2"	""	"236.1"	""	"250.7"	"2.1"	"285.1"	"307.3"	""	"640"	"43"	"35.000"	"28.000"	"0.00161491615220329"	"20"	"0.0001889"	"0.0004511"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSEMLQK"	"[R].fVSEMLQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"720.41907"	"1439.83086"	"1439.83324"	"-1.66"	"-0.00119"	"14/60"	"14"	"60"	"9151341.92565918"	"HCD"	"MS2"	"19.86409"	"732.3"	"100.000"	"52.6364"	"15916"	"15916"	"15890"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1263.3"	""	"1095.7"	""	"1089.3"	""	"1063.8"	"0.4"	"1209.3"	"1201.0"	""	"641"	"43"	"35.000"	"28.000"	"0.00159157839024833"	"19"	"0.0002277"	"0.001329"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSEMLQK"	"[R].fVSEMLQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"480.61523"	"1439.83115"	"1439.83324"	"-1.45"	"-0.00070"	"5/60"	"5"	"60"	"12676317.4440918"	"HCD"	"MS2"	"13.4813"	"403.0"	"100.000"	"52.7123"	"15947"	"15947"	"15922"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"685.1"	""	"590.6"	""	"615.6"	""	"586.6"	""	"660.3"	"676.4"	""	"642"	"27"	"35.000"	"28.000"	"0.066298703001518"	"25"	"0.0006037"	"0.004317"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSEMLQK"	"[R].fVSEMLQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"720.41937"	"1439.83147"	"1439.83324"	"-1.23"	"-0.00089"	"14/60"	"14"	"60"	"2552195.00238037"	"HCD"	"MS2"	"13.9957"	"241.3"	"100.000"	"53.1891"	"16192"	"16192"	"16166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"423.0"	""	"361.3"	""	"354.8"	""	"334.4"	""	"399.7"	"408.6"	""	"642"	"42"	"35.000"	"28.000"	"0.00185142034748912"	"19"	"0.0001889"	"0.0005395"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSEMLQK"	"[R].fVSEMLQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"480.61557"	"1439.83216"	"1439.83324"	"-0.75"	"-0.00036"	"6/60"	"6"	"60"	"13447708.7137451"	"HCD"	"MS2"	"16.93877"	"439.2"	"100.000"	"52.9087"	"16077"	"16077"	"16054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"740.6"	""	"644.4"	""	"644.0"	""	"647.6"	""	"727.8"	"748.7"	""	"637"	"27"	"35.000"	"28.000"	"0.0601325244687169"	"24"	"0.0009404"	"0.01001"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSEMLQK"	"[R].fVSEMLQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"720.42017"	"1439.83306"	"1439.83324"	"-0.13"	"-0.00009"	"14/60"	"14"	"60"	"15127733.449707"	"HCD"	"MS2"	"2.012039"	"1141.8"	"100.000"	"52.8601"	"16057"	"16057"	"16038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2014.7"	""	"1680.0"	""	"1672.3"	""	"1675.9"	"3.6"	"1852.1"	"1893.5"	""	"634"	"41"	"35.000"	"28.000"	"0.00228591070900979"	"16"	"0.0001889"	"0.0009445"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSEMLQK"	"[R].fVSEMLQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"720.42023"	"1439.83318"	"1439.83324"	"-0.05"	"-0.00003"	"14/60"	"14"	"60"	"4005313.63446045"	"HCD"	"MS2"	"0"	"368.9"	"100.000"	"52.9402"	"16040"	"16040"	"16018"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"598.6"	""	"528.8"	""	"569.0"	""	"525.4"	"2.2"	"642.6"	"623.5"	""	"634"	"45"	"35.000"	"28.000"	"0.00110932617947989"	"19"	"0.0001889"	"0.0004911"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVFLEQMK"	"[K].sVFLEQMk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"720.42035"	"1439.83342"	"1439.83324"	"0.12"	"0.00009"	"14/68"	"14"	"68"	"2756089.55914307"	"HCD"	"MS2"	"16.48965"	"260.0"	"100.000"	"48.4568"	"14216"	"14216"	"14192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"385.6"	""	"356.0"	""	"425.9"	""	"362.8"	"2.5"	"456.5"	"472.1"	""	"636"	"44"	"35.000"	"28.000"	"0.00129546928341708"	"27"	"0.0001889"	"0.0006178"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVFLEQMK"	"[K].sVFLEQMk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"720.42053"	"1439.83379"	"1439.83324"	"0.38"	"0.00027"	"14/68"	"14"	"68"	"3262450.862854"	"HCD"	"MS2"	"14.43688"	"299.6"	"100.000"	"48.6900"	"14359"	"14359"	"14335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"433.0"	""	"416.7"	""	"474.7"	""	"446.6"	"0.6"	"539.2"	"525.7"	""	"653"	"44"	"35.000"	"28.000"	"0.00133009660703043"	"28"	"0.0001889"	"0.0004552"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIYTVLFER"	"[R].lGIYTVLFER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"720.42627"	"1439.84526"	"1439.84597"	"-0.49"	"-0.00035"	"7/80"	"7"	"80"	"1004492.25854492"	"HCD"	"MS2"	"41.01564"	"53.1"	"100.000"	"74.9189"	"25035"	"25035"	"25007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.5"	""	"73.4"	""	"76.8"	""	"90.5"	""	"96.8"	"118.0"	""	"594"	"19"	"34.000"	"27.000"	"0.409974126587057"	"20"	"0.0001859"	"0.000351"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIYTVLFER"	"[R].lGIYTVLFER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"720.42676"	"1439.84624"	"1439.84597"	"0.19"	"0.00014"	"5/80"	"5"	"80"	"1400100.30957031"	"HCD"	"MS2"	"47.46747"	"66.7"	"100.000"	"74.9400"	"24992"	"24992"	"24961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.6"	""	"82.1"	""	"76.3"	""	"120.4"	""	"148.9"	"151.9"	""	"552"	"21"	"34.000"	"27.000"	"0.198111224390896"	"18"	"0.0001889"	"0.0008533"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDYLSSLGK"	"[K].vDYLSSLGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"720.42889"	"1439.85051"	"1439.85100"	"-0.34"	"-0.00025"	"7/72"	"7"	"72"	"4396249.60919189"	"HCD"	"MS2"	"32.46692"	"310.1"	"100.000"	"54.9691"	"16848"	"16848"	"16828"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"312.8"	""	"330.8"	""	"367.4"	""	"534.3"	"2.6"	"708.5"	"694.1"	""	"535"	"20"	"34.000"	"27.000"	"0.25195546706986"	"16"	"0.0001889"	"0.0005268"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDYLSSLGK"	"[K].vDYLSSLGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"720.42926"	"1439.85124"	"1439.85100"	"0.17"	"0.00012"	"6/72"	"6"	"72"	"4737384.35943604"	"HCD"	"MS2"	"27.87224"	"333.2"	"100.000"	"55.1340"	"16969"	"16969"	"16949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"331.1"	""	"347.5"	""	"358.8"	""	"595.9"	"4.9"	"760.0"	"773.7"	""	"535"	"24"	"34.000"	"27.000"	"0.0998444172103553"	"18"	"0.0001859"	"0.0003612"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVNIYFPK"	"[K].tVNIYFPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"720.43677"	"1439.86626"	"1439.86626"	"0.00"	"0.00000"	"12/66"	"12"	"66"	"2864929.22607422"	"HCD"	"MS2"	"4.164311"	"195.0"	"100.000"	"52.3194"	"15836"	"15836"	"15814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.8"	""	"276.8"	""	"296.7"	""	"298.6"	"0.0"	"343.1"	"352.9"	""	"431"	"37"	"33.000"	"26.000"	"0.00386765096582409"	"24"	"0.0001889"	"0.000781"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVNIYFPK"	"[K].tVNIYFPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"720.43683"	"1439.86638"	"1439.86626"	"0.09"	"0.00006"	"11/66"	"11"	"66"	"2800997.04797363"	"HCD"	"MS2"	"5.458881"	"206.8"	"100.000"	"52.1167"	"15703"	"15703"	"15682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.7"	""	"301.4"	""	"299.1"	""	"314.1"	"0.9"	"374.4"	"378.4"	""	"431"	"33"	"33.000"	"26.000"	"0.011680119188155"	"18"	"0.0002277"	"0.001155"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSMGLLMGEAR"	"[R].fSMGLLMGEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"720.88000"	"1440.75273"	"1440.75406"	"-0.92"	"-0.00066"	"8/94"	"8"	"94"	"2075068.03601074"	"HCD"	"MS2"	"45.84906"	"111.0"	"100.000"	"64.8635"	"20939"	"20939"	"20915"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.5"	""	"157.0"	""	"167.8"	""	"167.5"	""	"206.8"	"215.1"	""	"774"	"20"	"35.000"	"28.000"	"0.351326545178958"	"17"	"0.0001889"	"0.0007086"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSMGLLMGEAR"	"[R].fSMGLLMGEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"720.88025"	"1440.75322"	"1440.75406"	"-0.58"	"-0.00042"	"8/94"	"8"	"94"	"1990534.90686035"	"HCD"	"MS2"	"47.75531"	"115.2"	"100.000"	"64.8511"	"20881"	"20881"	"20857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.9"	""	"164.2"	""	"184.6"	""	"169.5"	""	"198.2"	"229.9"	""	"760"	"20"	"35.000"	"28.000"	"0.369643945035247"	"17"	"0.0001859"	"0.0003249"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTSEFLNK"	"[K].sGTSEFLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"720.90808"	"1440.80889"	"1440.80987"	"-0.68"	"-0.00049"	"7/74"	"7"	"74"	"3798938.39758301"	"HCD"	"MS2"	"0"	"336.0"	"100.000"	"36.9893"	"9542"	"9542"	"9514"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"548.1"	""	"429.7"	""	"467.4"	""	"526.8"	"0.1"	"618.4"	"591.1"	""	"683"	"41"	"35.000"	"28.000"	"0.0029811972230454"	"23"	"0.0001308"	"0.0002247"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTSEFLNK"	"[K].sGTSEFLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"720.90851"	"1440.80974"	"1440.80987"	"-0.09"	"-0.00006"	"7/74"	"7"	"74"	"1912876.08746338"	"HCD"	"MS2"	"0"	"185.3"	"100.000"	"37.1494"	"9651"	"9651"	"9622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"293.6"	""	"244.0"	""	"251.2"	""	"286.8"	""	"327.6"	"352.3"	""	"665"	"39"	"35.000"	"28.000"	"0.00428342975937967"	"21"	"7.476E-05"	"0.0001868"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VASLTLHNK"	"[K].vASLTLHNk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"4"	"480.96884"	"1440.89197"	"1440.89387"	"-1.32"	"-0.00063"	"8/70"	"8"	"70"	"13585235.3853149"	"HCD"	"MS2"	"34.60092"	"678.8"	"83.564"	"33.0967"	"8000"	"8000"	"7974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"884.7"	""	"878.1"	""	"852.8"	""	"1318.9"	""	"1316.9"	"1192.4"	""	"252"	"7"	"31.000"	"24.000"	"2.68145519793822"	"20"	"0.001718"	"0.02354"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASLTLHNK"	"[K].vASLTLHNk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"3"	"3"	"0.1111"	"0.0000"	"1"	"1"	"1"	"480.96906"	"1440.89261"	"1440.89387"	"-0.87"	"-0.00042"	"8/70"	"8"	"70"	"16532449.8212891"	"HCD"	"MS2"	"40.21006"	"526.3"	"55.093"	"33.0173"	"7925"	"7925"	"7896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"680.1"	""	"674.8"	""	"678.3"	""	"965.8"	"1.1"	"1032.9"	"957.6"	""	"256"	"9"	"31.000"	"24.000"	"1.44947246494151"	"21"	"0.0008731"	"0.008613"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPITAVIAAK"	"[R].vPITAVIAAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.98029"	"1440.95329"	"1440.95541"	"-1.47"	"-0.00106"	"8/72"	"8"	"72"	"3811804.10186768"	"HCD"	"MS2"	"38.55625"	"183.0"	"100.000"	"55.5771"	"17151"	"17151"	"17125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"256.4"	""	"251.0"	""	"265.0"	""	"309.2"	""	"319.9"	"334.4"	""	"95"	"42"	"26.000"	"19.000"	"0.000336274247582466"	"15"	"0.0001308"	"0.0002247"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPITAVIAAK"	"[R].vPITAVIAAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"480.98959"	"1440.95423"	"1440.95541"	"-0.82"	"-0.00039"	"9/72"	"9"	"72"	"3483485.74438477"	"HCD"	"MS2"	"69.76665"	"72.0"	"100.000"	"55.4608"	"17050"	"17050"	"17019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.6"	""	"92.7"	""	"100.6"	""	"112.3"	""	"133.4"	"149.2"	""	"97"	"15"	"26.000"	"19.000"	"0.154433579803717"	"13"	"0.0003146"	"0.001416"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPITAVIAAK"	"[R].vPITAVIAAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.98187"	"1440.95647"	"1440.95541"	"0.74"	"0.00053"	"9/72"	"9"	"72"	"4121278.64300537"	"HCD"	"MS2"	"44.10743"	"209.6"	"100.000"	"55.2862"	"16978"	"16978"	"16955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"283.8"	""	"285.4"	""	"302.5"	""	"334.7"	"0.4"	"402.8"	"377.1"	""	"96"	"45"	"26.000"	"19.000"	"0.000169138018100394"	"15"	"0.0001308"	"0.0002165"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIWHNDNK"	"[R].gIWHNDNk.[ST]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P00564; P07335"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2;Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P00564; P07335"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2; Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"481.26874"	"1441.79166"	"1441.79522"	"-2.47"	"-0.00119"	"7/62"	"7"	"62"	"10827215.5708618"	"HCD"	"MS2"	"11.94305"	"436.6"	"83.810"	"28.5788"	"6184"	"6184"	"6174"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"801.6"	""	"526.8"	""	"545.5"	""	"554.8"	""	"617.5"	"1092.1"	""	"778"	"22"	"35.000"	"28.000"	"0.220774851503925"	"20"	"0.0001308"	"0.0002978"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9649"	"0.0000"	"1"	"1"	"1"	"721.40271"	"1441.79814"	"1441.80008"	"-1.34"	"-0.00097"	"8/102"	"8"	"102"	"1389717.16467285"	"HCD"	"MS2"	"0"	"79.7"	"100.000"	"38.8918"	"10323"	"10323"	"10294"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.5"	""	"131.8"	""	"105.7"	""	"135.0"	""	"137.3"	"115.0"	""	"795"	"57"	"35.000"	"29.000"	"7.69727730668776E-05"	"18"	"0"	"1.891E-05"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"721.40271"	"1441.79814"	"1441.80008"	"-1.34"	"-0.00097"	"13/102"	"13"	"102"	"944621.979980469"	"HCD"	"MS2"	"0"	"75.0"	"100.000"	"38.5804"	"10195"	"10195"	"10167"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.1"	""	"138.9"	""	"94.5"	""	"112.7"	"1.1"	"130.1"	"123.6"	""	"795"	"47"	"35.000"	"29.000"	"0.000773280632445009"	"17"	"0"	"0.0001112"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"721.40338"	"1441.79949"	"1441.80008"	"-0.41"	"-0.00030"	"8/102"	"8"	"102"	"1108622.51898193"	"HCD"	"MS2"	"0"	"62.8"	"100.000"	"40.0576"	"10843"	"10843"	"10813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.7"	""	"106.7"	""	"79.8"	""	"90.3"	""	"101.8"	"100.0"	""	"802"	"43"	"36.000"	"29.000"	"0.00220365890416907"	"17"	"0"	"0.0001132"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40350"	"1441.79973"	"1441.80008"	"-0.24"	"-0.00017"	"13/102"	"13"	"102"	"1636834.97064209"	"HCD"	"MS2"	"0"	"96.7"	"100.000"	"39.2332"	"10463"	"10463"	"10438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.5"	""	"148.5"	""	"116.3"	""	"156.8"	""	"178.2"	"165.0"	""	"793"	"50"	"35.000"	"28.000"	"0.000443857120794726"	"16"	"0.0001859"	"0.0003293"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40350"	"1441.79973"	"1441.80008"	"-0.24"	"-0.00017"	"8/102"	"8"	"102"	"1836098.67364502"	"HCD"	"MS2"	"0"	"105.1"	"100.000"	"39.3496"	"10554"	"10554"	"10526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.6"	""	"152.8"	""	"136.4"	""	"171.0"	""	"195.0"	"171.6"	""	"793"	"49"	"35.000"	"28.000"	"0.000547322360915044"	"16"	"0"	"5.473E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"721.40375"	"1441.80022"	"1441.80008"	"0.10"	"0.00007"	"14/102"	"14"	"102"	"1497499.75299072"	"HCD"	"MS2"	"0"	"83.7"	"100.000"	"39.0030"	"10412"	"10412"	"10382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.3"	""	"130.1"	""	"104.9"	""	"130.7"	""	"136.8"	"138.2"	""	"790"	"54"	"35.000"	"28.000"	"0.000162404139836286"	"19"	"0"	"3.024E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYNVLDMK"	"[R].tYNVLDMk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"721.40894"	"1441.81059"	"1441.81251"	"-1.33"	"-0.00096"	"14/76"	"14"	"76"	"4165340.08465576"	"HCD"	"MS2"	"17.24617"	"378.5"	"100.000"	"47.1216"	"13670"	"13670"	"13640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"801.9"	""	"665.5"	""	"422.8"	""	"387.9"	"5.9"	"680.8"	"613.6"	""	"756"	"45"	"35.000"	"28.000"	"0.00112847462995099"	"24"	"0.0001889"	"0.0004227"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYNVLDMK"	"[R].tYNVLDMk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"721.40924"	"1441.81120"	"1441.81251"	"-0.90"	"-0.00065"	"14/76"	"14"	"76"	"3680573.53533936"	"HCD"	"MS2"	"38.85416"	"328.7"	"100.000"	"47.3760"	"13822"	"13822"	"13794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"685.0"	""	"581.6"	""	"391.7"	""	"338.0"	""	"581.6"	"530.3"	""	"750"	"45"	"35.000"	"28.000"	"0.00114559541745582"	"24"	"0.0001889"	"0.000405"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFGSFVEK"	"[R].iGFGSFVEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"481.28622"	"1441.84412"	"1441.84552"	"-0.97"	"-0.00047"	"7/70"	"7"	"70"	"10529188.7507935"	"HCD"	"MS2"	"8.715345"	"346.8"	"100.000"	"56.5049"	"17530"	"17530"	"17509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"371.1"	""	"446.8"	""	"428.6"	""	"607.4"	""	"710.3"	"731.8"	""	"579"	"35"	"34.000"	"27.000"	"0.00892582911597188"	"23"	"0.0006737"	"0.006628"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFGSFVEK"	"[R].iGFGSFVEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"481.28629"	"1441.84430"	"1441.84552"	"-0.85"	"-0.00041"	"8/70"	"8"	"70"	"3584818.24127197"	"HCD"	"MS2"	"30.02782"	"134.5"	"100.000"	"56.5971"	"17514"	"17514"	"17483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.1"	""	"163.2"	""	"196.8"	""	"252.5"	"0.5"	"235.1"	"256.6"	""	"575"	"11"	"34.000"	"27.000"	"2.0827533852156"	"18"	"0.00119"	"0.01619"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFGSFVEK"	"[R].iGFGSFVEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"721.42596"	"1441.84465"	"1441.84552"	"-0.60"	"-0.00044"	"7/70"	"7"	"70"	"9337816.17749023"	"HCD"	"MS2"	"30.77547"	"754.6"	"100.000"	"56.2256"	"17362"	"17362"	"17339"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"807.3"	""	"977.3"	""	"892.7"	""	"1354.3"	"5.0"	"1591.1"	"1541.4"	""	"575"	"32"	"34.000"	"27.000"	"0.0175241857956549"	"23"	"0.0001889"	"0.0007745"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFGSFVEK"	"[R].iGFGSFVEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"721.42633"	"1441.84538"	"1441.84552"	"-0.10"	"-0.00007"	"8/70"	"8"	"70"	"9646713.46704102"	"HCD"	"MS2"	"29.09216"	"777.0"	"100.000"	"56.4310"	"17500"	"17500"	"17477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"838.3"	""	"1056.1"	""	"909.5"	""	"1367.7"	"5.7"	"1542.2"	"1659.7"	""	"560"	"33"	"34.000"	"27.000"	"0.0131873651391147"	"19"	"0.0001889"	"0.0004564"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFGSFVEK"	"[R].iGFGSFVEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"481.28668"	"1441.84549"	"1441.84552"	"-0.02"	"-0.00001"	"7/70"	"7"	"70"	"8197908.00793457"	"HCD"	"MS2"	"9.765286"	"293.4"	"100.000"	"56.2786"	"17384"	"17384"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"297.2"	""	"387.4"	""	"368.6"	""	"521.9"	""	"589.0"	"627.0"	""	"560"	"34"	"34.000"	"27.000"	"0.0110194021127618"	"24"	"0.0004166"	"0.002126"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFGSFVEK"	"[R].iGFGSFVEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"721.42651"	"1441.84575"	"1441.84552"	"0.16"	"0.00011"	"8/70"	"8"	"70"	"8427499.62561035"	"HCD"	"MS2"	"9.964664"	"646.2"	"100.000"	"56.7330"	"17623"	"17623"	"17605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"694.2"	""	"793.5"	""	"805.2"	""	"1097.1"	""	"1357.0"	"1395.3"	""	"560"	"32"	"34.000"	"27.000"	"0.0194606808924863"	"23"	"0.0001889"	"0.000882"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFGSFVEK"	"[R].iGFGSFVEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"721.42688"	"1441.84648"	"1441.84552"	"0.67"	"0.00048"	"8/70"	"8"	"70"	"8235502.15081787"	"HCD"	"MS2"	"10.97133"	"668.1"	"100.000"	"56.5278"	"17485"	"17485"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"703.1"	""	"869.7"	""	"811.8"	""	"1124.3"	""	"1353.8"	"1490.9"	""	"562"	"28"	"34.000"	"27.000"	"0.0448442040373522"	"24"	"0.0001889"	"0.0005945"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILGDELPK"	"[R].vILGDELPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P28077"	"Proteasome subunit beta type-9 OS=Rattus norvegicus OX=10116 GN=Psmb9 PE=1 SV=2"	"P28077"	"Proteasome subunit beta type-9 OS=Rattus norvegicus OX=10116 GN=Psmb9 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.45526"	"1441.90325"	"1441.90304"	"0.14"	"0.00010"	"12/66"	"12"	"66"	"2256278.6739502"	"HCD"	"MS2"	"39.42055"	"152.9"	"100.000"	"51.3871"	"15405"	"15405"	"15378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.6"	""	"158.9"	""	"201.0"	""	"227.7"	""	"347.1"	"327.3"	""	"313"	"30"	"31.000"	"24.000"	"0.0151186962561906"	"14"	"0.0001889"	"0.0003751"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISGQQLPK"	"[R].iISGQQLPk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"721.46124"	"1441.91521"	"1441.91427"	"0.65"	"0.00047"	"14/72"	"14"	"72"	"3741443.93804932"	"HCD"	"MS2"	"38.24884"	"224.4"	"100.000"	"40.1034"	"10817"	"10817"	"10789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"317.4"	""	"333.1"	""	"329.2"	""	"326.7"	""	"384.1"	"439.8"	""	"233"	"37"	"30.000"	"23.000"	"0.00249646755030487"	"20"	"0.0001859"	"0.0003233"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISGQQLPK"	"[R].iISGQQLPk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"721.46149"	"1441.91570"	"1441.91427"	"0.99"	"0.00071"	"14/72"	"14"	"72"	"3885800.04504395"	"HCD"	"MS2"	"36.22327"	"230.2"	"100.000"	"40.2552"	"10923"	"10923"	"10893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"332.7"	""	"343.9"	""	"317.7"	""	"353.3"	""	"408.5"	"424.6"	""	"233"	"35"	"30.000"	"23.000"	"0.00399324471326615"	"20"	"0.0001859"	"0.0003627"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSEIPVLK"	"[R].vVSEIPVLk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.47241"	"1441.93755"	"1441.93942"	"-1.30"	"-0.00094"	"7/66"	"7"	"66"	"4229864.99121094"	"HCD"	"MS2"	"42.6791"	"242.2"	"100.000"	"55.1827"	"16936"	"16936"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"316.1"	""	"303.5"	""	"321.1"	""	"426.8"	""	"465.4"	"468.0"	""	"124"	"26"	"27.000"	"20.000"	"0.0157903475660273"	"14"	"0.0001859"	"0.0003602"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSEIPVLK"	"[R].vVSEIPVLk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.47241"	"1441.93755"	"1441.93942"	"-1.30"	"-0.00094"	"11/66"	"11"	"66"	"4260336.48474121"	"HCD"	"MS2"	"43.24055"	"235.8"	"100.000"	"55.3427"	"17055"	"17055"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.6"	""	"273.5"	""	"339.3"	""	"407.4"	"1.9"	"460.8"	"464.9"	""	"124"	"30"	"27.000"	"20.000"	"0.00621429247608298"	"14"	"0.0001859"	"0.0003506"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFEGLFK"	"[R].dEFEGLFk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"721.89978"	"1442.79228"	"1442.79315"	"-0.60"	"-0.00043"	"7/62"	"7"	"62"	"2636544.965271"	"HCD"	"MS2"	"50.54696"	"206.9"	"100.000"	"58.4955"	"18290"	"18290"	"18266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.4"	""	"280.5"	""	"273.1"	""	"325.1"	""	"363.6"	"377.4"	""	"759"	"26"	"35.000"	"28.000"	"0.104042739824663"	"20"	"0.0001889"	"0.0008283"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFEGLFK"	"[R].dEFEGLFk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"721.90033"	"1442.79338"	"1442.79315"	"0.16"	"0.00011"	"11/62"	"11"	"62"	"1669443.92889404"	"HCD"	"MS2"	"19.88487"	"155.5"	"100.000"	"58.7529"	"18445"	"18445"	"18421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.5"	""	"237.4"	""	"212.1"	""	"223.0"	"1.1"	"278.0"	"279.3"	""	"764"	"17"	"35.000"	"28.000"	"0.794444134473612"	"19"	"0.0001889"	"0.0009139"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVTPLFAYFK"	"[K].QVTPLFAYFk.[I]"	"K10(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"721.91534"	"1442.82341"	"1442.82450"	"-0.76"	"-0.00055"	"7/90"	"7"	"90"	"281907.892028809"	"HCD"	"MS2"	"8.010125"	"13.0"	"100.000"	"91.6960"	"31661"	"31661"	"31650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.1"	""	"20.6"	""	"16.4"	""	"23.1"	""	"20.9"	"23.1"	""	"737"	"40"	"35.000"	"28.000"	"0.00371909688519258"	"22"	"0.002393"	"0.03539"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALLELWELR"	"[R].aALLELWELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"481.62320"	"1442.85505"	"1442.85687"	"-1.26"	"-0.00061"	"10/78"	"10"	"78"	"505579.588195801"	"HCD"	"MS2"	"9.795342"	"9.7"	"100.000"	"80.5908"	"27286"	"27286"	"27265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.6"	""	"15.3"	""	"13.2"	""	"15.1"	""	"15.5"	"20.7"	""	"634"	"46"	"35.000"	"28.000"	"0.000765701084519046"	"25"	"0.0001308"	"0.0002112"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALLELWELR"	"[R].aALLELWELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"481.62320"	"1442.85505"	"1442.85687"	"-1.26"	"-0.00061"	"12/78"	"12"	"78"	"1319732.44525146"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"80.2394"	"27194"	"27194"	"27167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"21.2"	""	"15.3"	""	"17.0"	""	"18.2"	"27.0"	""	"634"	"44"	"35.000"	"28.000"	"0.00136476935525873"	""	"0.0001308"	"0.0002738"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALLELWELR"	"[R].aALLELWELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"481.62344"	"1442.85578"	"1442.85687"	"-0.75"	"-0.00036"	"11/78"	"11"	"78"	"788929.199707031"	"HCD"	"MS2"	"9.711168"	"10.0"	"100.000"	"80.5347"	"27314"	"27314"	"27295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"16.0"	""	"15.7"	""	"15.2"	""	"17.5"	"19.7"	""	"653"	"42"	"35.000"	"28.000"	"0.00187881139540582"	"25"	"0.0001859"	"0.0003349"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALLELWELR"	"[R].aALLELWELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"481.62360"	"1442.85624"	"1442.85687"	"-0.44"	"-0.00021"	"12/78"	"12"	"78"	"1777046.52789307"	"HCD"	"MS2"	"3.303918"	"12.9"	"100.000"	"80.2771"	"27158"	"27158"	"27137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.8"	""	"16.1"	""	"20.9"	""	"18.7"	"1.5"	"20.7"	"28.0"	""	"653"	"62"	"35.000"	"28.000"	"2.11292064041912E-05"	""	"0"	"9.941E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALLELWELR"	"[R].aALLELWELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"721.93182"	"1442.85637"	"1442.85687"	"-0.34"	"-0.00025"	"14/78"	"14"	"78"	"3991940.6953125"	"HCD"	"MS2"	"0.2803308"	"174.2"	"100.000"	"80.5009"	"27250"	"27250"	"27233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.6"	""	"254.0"	""	"242.2"	""	"207.6"	""	"314.0"	"436.9"	""	"653"	"46"	"35.000"	"28.000"	"0.000788647962446272"	""	"0"	"6.016E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALLELWELR"	"[R].aALLELWELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"721.93182"	"1442.85637"	"1442.85687"	"-0.34"	"-0.00025"	"14/78"	"14"	"78"	"5177400.83789063"	"HCD"	"MS2"	"0.201872"	"216.1"	"100.000"	"80.4495"	"27280"	"27280"	"27263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"257.2"	""	"315.9"	""	"285.1"	""	"273.5"	"1.2"	"390.7"	"528.0"	""	"653"	"50"	"35.000"	"28.000"	"0.000316871504305652"	""	"0"	"9.673E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALLELWELR"	"[R].aALLELWELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"721.93207"	"1442.85686"	"1442.85687"	"-0.01"	"0.00000"	"14/78"	"14"	"78"	"2014711.74273682"	"HCD"	"MS2"	"15.01736"	"94.2"	"100.000"	"80.1987"	"27126"	"27126"	"27105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.9"	""	"141.9"	""	"132.0"	""	"117.3"	"0.2"	"174.8"	"217.8"	""	"630"	"50"	"34.000"	"27.000"	"0.00034065169465885"	""	"0"	"4.655E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALLELWELR"	"[R].aALLELWELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"721.93231"	"1442.85735"	"1442.85687"	"0.33"	"0.00024"	"9/78"	"9"	"78"	"1253981.53039551"	"HCD"	"MS2"	"17.89886"	"58.9"	"100.000"	"80.1496"	"27157"	"27157"	"27135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.7"	""	"88.4"	""	"84.7"	""	"70.6"	""	"102.4"	"140.5"	""	"630"	"48"	"34.000"	"27.000"	"0.000466993196820975"	""	"0"	"4.476E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAFGQLHK"	"[R].lAAFGQLHk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"481.63385"	"1442.88700"	"1442.88839"	"-0.97"	"-0.00046"	"6/72"	"6"	"72"	"9136732.22064209"	"HCD"	"MS2"	"5.459362"	"384.9"	"100.000"	"41.0797"	"11217"	"11217"	"11189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"553.6"	""	"459.6"	""	"452.0"	""	"633.3"	""	"768.2"	"788.4"	""	"440"	"26"	"33.000"	"26.000"	"0.0617195400349376"	"18"	"0.0006037"	"0.005375"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLANALTSALR"	"[R].aLLANALTSALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z142"	"Transmembrane protein 33 OS=Rattus norvegicus OX=10116 GN=Tmem33 PE=2 SV=1"	"Q9Z142"	"Transmembrane protein 33 OS=Rattus norvegicus OX=10116 GN=Tmem33 PE=2 SV=1"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"481.63406"	"1442.88764"	"1442.88923"	"-1.10"	"-0.00053"	"12/104"	"12"	"104"	"1096242.58227539"	"HCD"	"MS2"	"42.90928"	"22.9"	"100.000"	"66.2776"	"21464"	"21464"	"21433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.9"	""	"32.3"	""	"33.0"	""	"41.3"	""	"40.9"	"37.4"	""	"439"	"32"	"33.000"	"26.000"	"0.0133793348944217"	"21"	"0"	"0.0001539"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAFGQLHK"	"[R].lAAFGQLHk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"481.63419"	"1442.88800"	"1442.88839"	"-0.27"	"-0.00013"	"10/72"	"10"	"72"	"11229398.715271"	"HCD"	"MS2"	"10.24476"	"459.9"	"100.000"	"41.2677"	"11338"	"11338"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"698.4"	""	"548.3"	""	"509.1"	""	"773.0"	""	"886.9"	"950.0"	""	"438"	"32"	"33.000"	"26.000"	"0.0142706618299325"	""	"0"	"8.983E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPMFIVHK"	"[K].iPMFIVHk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"481.63626"	"1442.89423"	"1442.89578"	"-1.08"	"-0.00052"	"6/58"	"6"	"58"	"5251963.13586426"	"HCD"	"MS2"	"6.630015"	"151.9"	"100.000"	"52.0039"	"15657"	"15657"	"15634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"236.3"	""	"232.8"	""	"234.7"	""	"195.5"	"0.4"	"263.7"	"273.9"	""	"388"	"38"	"32.000"	"25.000"	"0.00312465253224584"	"22"	"0"	"9.714E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPMFIVHK"	"[K].iPMFIVHk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"481.63666"	"1442.89542"	"1442.89578"	"-0.25"	"-0.00012"	"6/58"	"6"	"58"	"4648711.08953857"	"HCD"	"MS2"	"16.83516"	"141.7"	"100.000"	"52.1717"	"15776"	"15776"	"15750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.7"	""	"204.8"	""	"223.5"	""	"183.9"	""	"250.1"	"258.0"	""	"381"	"28"	"32.000"	"25.000"	"0.0316151305866855"	"15"	"0.0001889"	"0.0003803"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANPPKK"	"[R].tANPPkk.[R]"	"N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62142"	"Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P62142"	"Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"481.64761"	"1442.92829"	"1442.92981"	"-1.06"	"-0.00051"	"6/56"	"6"	"56"	"3072456.95233154"	"HCD"	"MS2"	"40.04338"	"244.9"	"100.000"	"24.4116"	"4493"	"4493"	"4472"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"459.4"	""	"385.8"	""	"397.4"	""	"334.3"	""	"363.3"	"373.9"	""	"228"	"1"	"30.000"	"23.000"	"8.95168623455482"	"13"	"0.005886"	"0.1918"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGLTLLQK"	"[R].vLGLTLLQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"481.66125"	"1442.96921"	"1442.97106"	"-1.28"	"-0.00062"	"7/66"	"7"	"66"	"4468252.61914063"	"HCD"	"MS2"	"23.50255"	"131.3"	"100.000"	"66.7476"	"21708"	"21708"	"21683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.2"	""	"184.3"	""	"209.8"	""	"215.3"	""	"217.9"	"248.6"	""	"91"	"32"	"26.000"	"19.000"	"0.00264247809972197"	""	"0.0001889"	"0.0006219"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGLTLLQK"	"[R].vLGLTLLQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"721.98865"	"1442.97002"	"1442.97106"	"-0.72"	"-0.00052"	"14/66"	"14"	"66"	"4038440.32281494"	"HCD"	"MS2"	"7.045136"	"257.7"	"100.000"	"66.6944"	"21686"	"21686"	"21667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"352.9"	""	"363.0"	""	"401.4"	""	"448.8"	"0.2"	"405.3"	"466.8"	""	"91"	"47"	"26.000"	"19.000"	"8.66984626673278E-05"	""	"0.0001859"	"0.0003421"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGLTLLQK"	"[R].vLGLTLLQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"721.98895"	"1442.97063"	"1442.97106"	"-0.30"	"-0.00021"	"14/66"	"14"	"66"	"3382295.28424072"	"HCD"	"MS2"	"20.89564"	"229.1"	"100.000"	"66.7690"	"21664"	"21664"	"21641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"300.8"	""	"314.3"	""	"344.3"	""	"417.9"	""	"377.6"	"414.5"	""	"91"	"49"	"26.000"	"19.000"	"5.39524780416058E-05"	""	"0.0001859"	"0.0003207"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGLTLLQK"	"[R].vLGLTLLQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"481.66193"	"1442.97123"	"1442.97106"	"0.12"	"0.00006"	"7/66"	"7"	"66"	"4539228.50927734"	"HCD"	"MS2"	"23.14253"	"135.3"	"100.000"	"66.8473"	"21696"	"21696"	"21673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.6"	""	"192.6"	""	"222.6"	""	"237.4"	"1.9"	"229.1"	"232.1"	""	"91"	"37"	"26.000"	"19.000"	"0.000937586610537851"	""	"0.0001889"	"0.0005194"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTWFAGEK"	"[K].fTWFAGEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"722.40485"	"1443.80242"	"1443.80366"	"-0.86"	"-0.00062"	"7/66"	"7"	"66"	"4396284.06567383"	"HCD"	"MS2"	"9.574307"	"384.6"	"100.000"	"59.3690"	"18695"	"18695"	"18677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"637.0"	""	"512.1"	""	"580.5"	""	"591.3"	"2.6"	"612.7"	"701.3"	""	"775"	"40"	"35.000"	"28.000"	"0.00418091854864058"	"21"	"0.0001889"	"0.0005391"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTWFAGEK"	"[K].fTWFAGEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"722.40582"	"1443.80437"	"1443.80366"	"0.49"	"0.00036"	"7/66"	"7"	"66"	"4341500.37231445"	"HCD"	"MS2"	"4.041563"	"359.7"	"100.000"	"59.1982"	"18572"	"18572"	"18553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"562.9"	""	"506.0"	""	"543.8"	""	"566.6"	"4.1"	"548.6"	"669.8"	""	"766"	"37"	"35.000"	"28.000"	"0.00798360008226261"	"20"	"0.0001889"	"0.0006325"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPVDLVEK"	"[R].wPVDLVEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"722.43396"	"1443.86064"	"1443.86117"	"-0.37"	"-0.00026"	"7/62"	"7"	"62"	"2011566.37353516"	"HCD"	"MS2"	"35.11695"	"123.3"	"100.000"	"61.8997"	"19675"	"19675"	"19657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.7"	""	"146.9"	""	"155.3"	""	"201.5"	""	"241.0"	"241.3"	""	"656"	"39"	"35.000"	"28.000"	"0.00385366398020166"	"18"	"0.0001859"	"0.0003495"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPVDLVEK"	"[R].wPVDLVEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"722.43445"	"1443.86162"	"1443.86117"	"0.31"	"0.00022"	"7/62"	"7"	"62"	"2065908.26879883"	"HCD"	"MS2"	"36.07845"	"125.0"	"100.000"	"62.0381"	"19785"	"19785"	"19763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.7"	""	"158.0"	""	"153.8"	""	"216.1"	""	"234.0"	"240.8"	""	"634"	"39"	"35.000"	"28.000"	"0.00419816266656709"	"19"	"0.0001308"	"0.0003009"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIAAIKTK"	"[K].dVNAAIAAIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"1"	"2"	"2"	"0.0820"	"0.0000"	"1"	"1"	"1"	"722.44873"	"1443.89018"	"1443.87324"	"11.73"	"0.00847"	"8/126"	"8"	"126"	"2587699.51416016"	"HCD"	"MS2"	"0"	"193.0"	"100.000"	"50.2438"	"14989"	"14989"	"14974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.1"	""	"211.8"	""	"247.7"	""	"328.3"	""	"367.8"	"394.2"	""	"468"	"61"	"33.000"	"26.000"	"1.69908794039826E-05"	""	"0.0006037"	"0.004383"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIAAIKTK"	"[K].dVNAAIAAIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"1"	"3"	"3"	"0.0943"	"0.0000"	"1"	"1"	"1"	"481.96844"	"1443.89078"	"1443.87324"	"12.15"	"0.00585"	"7/126"	"7"	"126"	"2632685.82012939"	"HCD"	"MS2"	"29.1341"	"98.8"	"100.000"	"50.0158"	"14848"	"14848"	"14835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.3"	""	"116.4"	""	"118.3"	""	"181.3"	"0.0"	"201.5"	"197.3"	""	"465"	"53"	"33.000"	"26.000"	"0.000121457113942295"	""	"0.000523"	"0.003137"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIAAIKTK"	"[K].dVNAAIAAIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"1"	"2"	"2"	"0.0789"	"0.0000"	"1"	"1"	"1"	"722.44904"	"1443.89079"	"1443.87324"	"12.15"	"0.00877"	"9/126"	"9"	"126"	"3065412.48638916"	"HCD"	"MS2"	"0"	"224.0"	"100.000"	"50.0089"	"14845"	"14845"	"14835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.3"	""	"261.5"	""	"252.2"	""	"394.9"	""	"454.0"	"456.3"	""	"465"	"76"	"33.000"	"26.000"	"5.2411061682544E-07"	""	"0.000494"	"0.002699"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFTGLAHVK"	"[K].lFTGLAHVk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"481.97360"	"1443.90625"	"1443.90879"	"-1.76"	"-0.00085"	"11/64"	"11"	"64"	"13055562.0577393"	"HCD"	"MS2"	"14.71257"	"514.9"	"100.000"	"43.3169"	"12171"	"12171"	"12161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"650.0"	""	"652.3"	""	"664.8"	""	"809.7"	"3.1"	"1008.4"	"1098.5"	""	"372"	"40"	"32.000"	"25.000"	"0.00185572211870995"	"24"	"0"	"8.357E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFTGLAHVK"	"[K].lFTGLAHVk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"481.97412"	"1443.90781"	"1443.90879"	"-0.68"	"-0.00033"	"8/64"	"8"	"64"	"13649572.8712769"	"HCD"	"MS2"	"14.70752"	"440.9"	"78.310"	"43.0538"	"12018"	"12018"	"12010"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"506.0"	""	"546.6"	""	"573.6"	""	"710.3"	""	"892.5"	"959.9"	""	"367"	"41"	"32.000"	"25.000"	"0.00152277615838896"	"25"	"0"	"0.0001184"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLGSGGVGK"	"[K].lVVLGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"481.98074"	"1443.92768"	"1443.92992"	"-1.55"	"-0.00075"	"8/80"	"8"	"80"	"6114224.77770996"	"HCD"	"MS2"	"20.43953"	"226.1"	"100.000"	"48.4513"	"14261"	"14261"	"14239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"254.0"	""	"303.2"	""	"319.5"	""	"376.9"	"0.8"	"448.2"	"443.1"	""	"323"	"53"	"32.000"	"25.000"	"8.15027995565098E-05"	"16"	"0"	"2.893E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLGSGGVGK"	"[K].lVVLGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"481.98077"	"1443.92777"	"1443.92992"	"-1.49"	"-0.00072"	"7/80"	"7"	"80"	"4536748.00646973"	"HCD"	"MS2"	"4.015944"	"187.9"	"100.000"	"48.1787"	"14102"	"14102"	"14080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.3"	""	"248.9"	""	"251.2"	""	"322.9"	"1.2"	"362.1"	"391.3"	""	"323"	"40"	"32.000"	"25.000"	"0.00176267614336474"	"15"	"0"	"0.0001576"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLGSGGVGK"	"[K].lVVLGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"481.98096"	"1443.92832"	"1443.92992"	"-1.11"	"-0.00053"	"8/80"	"8"	"80"	"25881951.2625732"	"HCD"	"MS2"	"4.569536"	"574.1"	"78.888"	"48.1305"	"14131"	"14131"	"14114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"646.1"	""	"912.1"	""	"806.3"	""	"941.7"	""	"1061.4"	"1081.0"	""	"323"	"61"	"32.000"	"25.000"	"1.17266112125777E-05"	"16"	"0"	"6.198E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLGSGGVGK"	"[K].lVVLGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"722.46802"	"1443.92876"	"1443.92992"	"-0.80"	"-0.00058"	"10/80"	"10"	"80"	"6347786.35290527"	"HCD"	"MS2"	"0"	"386.4"	"100.000"	"48.1304"	"14082"	"14082"	"14064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"418.4"	""	"590.0"	""	"559.3"	""	"609.4"	""	"734.3"	"757.3"	""	"318"	"58"	"32.000"	"25.000"	"2.44566587808182E-05"	""	"0"	"1.539E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLGSGGVGK"	"[K].lVVLGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"722.46808"	"1443.92888"	"1443.92992"	"-0.72"	"-0.00052"	"10/80"	"10"	"80"	"17224501.6470947"	"HCD"	"MS2"	"20.73292"	"956.2"	"100.000"	"48.1029"	"14119"	"14119"	"14098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1069.2"	""	"1535.8"	""	"1338.2"	""	"1583.1"	"11.8"	"1747.5"	"1778.1"	""	"318"	"62"	"32.000"	"25.000"	"9.34108070522345E-06"	""	"0"	"2.388E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLGSGGVGK"	"[K].lVVLGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"481.98120"	"1443.92905"	"1443.92992"	"-0.60"	"-0.00029"	"8/80"	"8"	"80"	"22824199.3294067"	"HCD"	"MS2"	"11.87626"	"635.8"	"100.000"	"47.8509"	"13968"	"13968"	"13944"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"698.3"	""	"1006.0"	""	"914.2"	""	"1049.8"	"1.7"	"1183.9"	"1173.2"	""	"318"	"51"	"32.000"	"25.000"	"0.000137213589094948"	"16"	"0"	"3.907E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLGSGGVGK"	"[K].lVVLGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"722.46832"	"1443.92937"	"1443.92992"	"-0.38"	"-0.00028"	"10/80"	"10"	"80"	"6778964.29351807"	"HCD"	"MS2"	"0"	"406.3"	"100.000"	"48.4031"	"14241"	"14241"	"14226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"423.0"	""	"596.8"	""	"586.8"	""	"643.7"	"0.5"	"770.6"	"834.0"	""	"318"	"61"	"32.000"	"25.000"	"1.20891878033489E-05"	""	"0"	"2.288E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVLGSGGVGK"	"[K].lVVLGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"0.7705"	"0.0000"	"1"	"1"	"1"	"722.46838"	"1443.92949"	"1443.92992"	"-0.30"	"-0.00021"	"10/80"	"10"	"80"	"18509677.4019775"	"HCD"	"MS2"	"7.687892"	"1116.6"	"100.000"	"47.8371"	"13962"	"13962"	"13944"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1194.0"	""	"1792.0"	""	"1585.8"	""	"1852.9"	"2.2"	"2070.5"	"2089.0"	""	"318"	"61"	"32.000"	"25.000"	"1.23423291543962E-05"	""	"0"	"3.696E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPIFLK"	"[R].vIRPIFLk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"481.99832"	"1443.98041"	"1443.98156"	"-0.80"	"-0.00038"	"8/68"	"8"	"68"	"7970895.36535645"	"HCD"	"MS2"	"6.242488"	"413.1"	"100.000"	"47.9007"	"14036"	"14036"	"14018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"513.8"	""	"521.6"	""	"677.1"	""	"672.3"	"3.5"	"736.9"	"788.0"	""	"63"	"16"	"24.000"	"17.000"	"0.0771454921181095"	"14"	"0.0008731"	"0.009273"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPLFLK"	"[R].vIRPLFLk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q5XI60"	"Receptor expression-enhancing protein 6 OS=Rattus norvegicus OX=10116 GN=Reep6 PE=2 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"481.99832"	"1443.98041"	"1443.98156"	"-0.80"	"-0.00038"	"8/68"	"8"	"68"	"7970895.36535645"	"HCD"	"MS2"	"6.242488"	"413.1"	"100.000"	"47.9007"	"14036"	"14036"	"14018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"513.8"	""	"521.6"	""	"677.1"	""	"672.3"	"3.5"	"736.9"	"788.0"	""	"63"	"16"	"24.000"	"17.000"	"0.0771454921181095"	"14"	"0.0008731"	"0.009273"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPIFLK"	"[R].vIRPIFLk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"481.99841"	"1443.98069"	"1443.98156"	"-0.61"	"-0.00029"	"5/68"	"5"	"68"	"6104376.25500488"	"HCD"	"MS2"	"5.393555"	"327.8"	"100.000"	"47.6485"	"13885"	"13885"	"13864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"394.6"	""	"412.5"	""	"535.2"	""	"542.7"	"4.8"	"579.4"	"636.7"	""	"63"	"13"	"24.000"	"17.000"	"0.160439224383017"	"13"	"0.002489"	"0.03783"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPLFLK"	"[R].vIRPLFLk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q5XI60"	"Receptor expression-enhancing protein 6 OS=Rattus norvegicus OX=10116 GN=Reep6 PE=2 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"481.99841"	"1443.98069"	"1443.98156"	"-0.61"	"-0.00029"	"5/68"	"5"	"68"	"6104376.25500488"	"HCD"	"MS2"	"5.393555"	"327.8"	"100.000"	"47.6485"	"13885"	"13885"	"13864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"394.6"	""	"412.5"	""	"535.2"	""	"542.7"	"4.8"	"579.4"	"636.7"	""	"63"	"13"	"24.000"	"17.000"	"0.160439224383017"	"13"	"0.002489"	"0.03783"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPIFLK"	"[R].vIRPIFLk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"481.99854"	"1443.98105"	"1443.98156"	"-0.35"	"-0.00017"	"5/68"	"5"	"68"	"17857688.5077515"	"HCD"	"MS2"	"6.651926"	"939.0"	"100.000"	"47.3107"	"13747"	"13747"	"13720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1227.7"	""	"1274.1"	""	"1465.3"	""	"1580.2"	""	"1594.7"	"1750.1"	""	"62"	"13"	"24.000"	"17.000"	"0.15572620275194"	"17"	"0.0008125"	"0.007582"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPLFLK"	"[R].vIRPLFLk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q5XI60"	"Receptor expression-enhancing protein 6 OS=Rattus norvegicus OX=10116 GN=Reep6 PE=2 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"481.99854"	"1443.98105"	"1443.98156"	"-0.35"	"-0.00017"	"5/68"	"5"	"68"	"17857688.5077515"	"HCD"	"MS2"	"6.651926"	"939.0"	"100.000"	"47.3107"	"13747"	"13747"	"13720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1227.7"	""	"1274.1"	""	"1465.3"	""	"1580.2"	""	"1594.7"	"1750.1"	""	"62"	"13"	"24.000"	"17.000"	"0.15572620275194"	"17"	"0.0008125"	"0.007582"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPIFLK"	"[R].vIRPIFLk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"481.99915"	"1443.98288"	"1443.98156"	"0.91"	"0.00044"	"5/68"	"5"	"68"	"20281494.3829956"	"HCD"	"MS2"	"11.97656"	"1040.0"	"100.000"	"47.5930"	"13910"	"13910"	"13890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1334.0"	""	"1441.2"	""	"1656.1"	""	"1703.5"	""	"1775.7"	"1942.1"	""	"57"	"12"	"24.000"	"17.000"	"0.182744729326771"	"13"	"0.001879"	"0.02681"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPLFLK"	"[R].vIRPLFLk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	""	""	"Q5XI60"	"Receptor expression-enhancing protein 6 OS=Rattus norvegicus OX=10116 GN=Reep6 PE=2 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"481.99915"	"1443.98288"	"1443.98156"	"0.91"	"0.00044"	"5/68"	"5"	"68"	"20281494.3829956"	"HCD"	"MS2"	"11.97656"	"1040.0"	"100.000"	"47.5930"	"13910"	"13910"	"13890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1334.0"	""	"1441.2"	""	"1656.1"	""	"1703.5"	""	"1775.7"	"1942.1"	""	"57"	"12"	"24.000"	"17.000"	"0.182744729326771"	"13"	"0.001879"	"0.02681"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLNPTWK"	"[K].nNLNPTWk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"722.91833"	"1444.82939"	"1444.83127"	"-1.30"	"-0.00094"	"5/70"	"5"	"70"	"907604.617553711"	"HCD"	"MS2"	"0"	"87.2"	"100.000"	"37.7251"	"9844"	"9844"	"9816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.9"	""	"121.4"	""	"120.8"	""	"140.8"	"0.3"	"143.0"	"156.0"	""	"866"	"25"	"36.000"	"29.000"	"0.130463160847259"	"23"	"0.0001889"	"0.000497"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASDLLEWIR"	"[KR].lASDLLEWIR.[R]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"722.92114"	"1444.83501"	"1444.83613"	"-0.78"	"-0.00056"	"7/80"	"7"	"80"	"852493.364807129"	"HCD"	"MS2"	"3.935055"	"42.4"	"100.000"	"85.7574"	"29439"	"29439"	"29421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.0"	""	"51.9"	""	"51.9"	""	"69.0"	""	"79.8"	"94.8"	""	"835"	"39"	"36.000"	"29.000"	"0.00542820798828899"	"22"	"0"	"4.869E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASDLLEWIR"	"[KR].lASDLLEWIR.[R]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"722.92133"	"1444.83537"	"1444.83613"	"-0.52"	"-0.00038"	"9/80"	"9"	"80"	"1219356.19622803"	"HCD"	"MS2"	"0"	"57.4"	"100.000"	"85.4477"	"29317"	"29317"	"29298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.6"	""	"61.5"	""	"65.0"	""	"104.0"	""	"118.2"	"124.9"	""	"835"	"32"	"36.000"	"29.000"	"0.0279033585584897"	"22"	"0"	"5.485E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASDLLEWIR"	"[KR].lASDLLEWIR.[R]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"722.92157"	"1444.83586"	"1444.83613"	"-0.19"	"-0.00013"	"14/80"	"14"	"80"	"1528506.89685059"	"HCD"	"MS2"	"2.095011"	"76.5"	"100.000"	"85.6610"	"29353"	"29353"	"29336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.1"	""	"99.6"	""	"90.1"	""	"136.4"	""	"154.1"	"154.7"	""	"786"	"48"	"35.000"	"28.000"	"0.000570679865711982"	"25"	"0"	"4.386E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASDLLEWIR"	"[KR].lASDLLEWIR.[R]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"722.92194"	"1444.83660"	"1444.83613"	"0.32"	"0.00023"	"6/80"	"6"	"80"	"1178606.82946777"	"HCD"	"MS2"	"4.953976"	"57.8"	"100.000"	"85.3633"	"29232"	"29232"	"29211"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.9"	""	"76.9"	""	"57.0"	""	"102.8"	""	"122.7"	"122.6"	""	"775"	"23"	"35.000"	"28.000"	"0.174289693771149"	"21"	"0"	"9.641E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLMNLGGLAVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"482.28775"	"1444.84870"	"1444.85074"	"-1.41"	"-0.00068"	"8/104"	"8"	"104"	"19947228.8052368"	"HCD"	"MS2"	"3.011805"	"111.3"	"80.318"	"57.0878"	"17768"	"17768"	"17749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.9"	""	"175.4"	""	"182.4"	""	"130.1"	""	"207.5"	"212.1"	""	"761"	"66"	"35.000"	"28.000"	"9.40491037178638E-06"	"26"	"0"	"3.333E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLMNLGGLAVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"722.92847"	"1444.84966"	"1444.85074"	"-0.75"	"-0.00054"	"10/104"	"10"	"104"	"17032987.5529785"	"HCD"	"MS2"	"0.7651565"	"321.9"	"45.746"	"57.3160"	"17862"	"17862"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"463.6"	""	"476.8"	""	"538.9"	""	"326.5"	"0.2"	"586.8"	"657.0"	""	"742"	"78"	"35.000"	"28.000"	"6.59741661124441E-07"	"21"	"0"	"1.239E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLMNLGGLAVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"482.28827"	"1444.85025"	"1444.85074"	"-0.33"	"-0.00016"	"9/104"	"9"	"104"	"4418943.6204834"	"HCD"	"MS2"	"35.66952"	"191.2"	"100.000"	"57.2046"	"17762"	"17762"	"17739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.4"	""	"263.5"	""	"286.5"	""	"322.7"	""	"359.6"	"338.5"	""	"687"	"25"	"35.000"	"28.000"	"0.0981582351649294"	"16"	"0"	"0.0001138"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLMNLGGLAVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9403"	"0.0000"	"1"	"1"	"1"	"722.92896"	"1444.85063"	"1444.85074"	"-0.07"	"-0.00005"	"11/104"	"11"	"104"	"16965960.4190063"	"HCD"	"MS2"	"1.965908"	"742.7"	"100.000"	"57.0094"	"17736"	"17736"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1131.9"	""	"1156.4"	""	"1201.8"	""	"813.5"	""	"1246.5"	"1480.0"	""	"685"	"67"	"35.000"	"28.000"	"6.86531669372567E-06"	"21"	"0"	"2.503E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLMNLGGLAVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"482.28842"	"1444.85071"	"1444.85074"	"-0.02"	"-0.00001"	"9/104"	"9"	"104"	"4825939.23974609"	"HCD"	"MS2"	"38.3436"	"196.4"	"100.000"	"57.4105"	"17900"	"17900"	"17877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.3"	""	"252.2"	""	"312.5"	""	"325.5"	""	"342.1"	"361.0"	""	"685"	"22"	"35.000"	"28.000"	"0.206376658230467"	"18"	"0"	"0.0001786"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLMNLGGLAVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"482.28851"	"1444.85099"	"1444.85074"	"0.17"	"0.00008"	"8/104"	"8"	"104"	"17915421.0062256"	"HCD"	"MS2"	"0"	"126.0"	"93.160"	"56.8800"	"17629"	"17629"	"17611"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.7"	""	"187.2"	""	"197.7"	""	"162.1"	"0.4"	"221.8"	"238.6"	""	"710"	"66"	"35.000"	"28.000"	"8.83544347990247E-06"	"27"	"0"	"1.195E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLMNLGGLAVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"722.92914"	"1444.85100"	"1444.85074"	"0.18"	"0.00013"	"10/104"	"10"	"104"	"27608051.4505615"	"HCD"	"MS2"	"0.3819599"	"715.4"	"63.827"	"56.8366"	"17612"	"17612"	"17595"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1073.9"	""	"1118.7"	""	"1186.2"	""	"734.4"	"12.2"	"1226.3"	"1420.9"	""	"710"	"66"	"35.000"	"28.000"	"8.93775309354394E-06"	"21"	"0"	"2.854E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLMNLGGLAVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9467"	"0.0000"	"1"	"1"	"1"	"722.92987"	"1444.85246"	"1444.85074"	"1.20"	"0.00086"	"10/104"	"10"	"104"	"12175308.8255005"	"HCD"	"MS2"	"1.185349"	"313.2"	"56.931"	"57.1493"	"17740"	"17740"	"17723"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"436.0"	""	"457.8"	""	"510.1"	""	"357.3"	""	"572.3"	"634.4"	""	"682"	"75"	"35.000"	"28.000"	"1.15545857243468E-06"	"21"	"0"	"1.179E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDGPGGK"	"[K].vkDGPGGk.[E]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"482.30661"	"1444.90528"	"1444.90907"	"-2.63"	"-0.00127"	"4/68"	"4"	"68"	"3616551.21313477"	"HCD"	"MS2"	"11.10186"	"340.4"	"100.000"	"25.9345"	"5115"	"5115"	"5095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"522.6"	""	"482.5"	""	"466.8"	""	"560.8"	""	"606.7"	"583.7"	""	"550"	"7"	"34.000"	"27.000"	"5.36207264933463"	"15"	"0.0006037"	"0.005824"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQELVSGLK"	"[K].iQELVSGLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"482.30902"	"1444.91251"	"1444.91394"	"-0.99"	"-0.00048"	"10/84"	"10"	"84"	"1243426.42584229"	"HCD"	"MS2"	"24.33095"	"49.4"	"100.000"	"60.0228"	"18963"	"18963"	"18932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.3"	""	"62.7"	""	"70.0"	""	"96.1"	""	"82.8"	"86.4"	""	"506"	"41"	"34.000"	"27.000"	"0.00210921339708767"	"21"	"0.0001308"	"0.000239"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTAAQLILK"	"[K].qTAAQLILk.[A]"	"N-Term(TMT6plex); Q1(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q02874"	"Core histone macro-H2A.1 OS=Rattus norvegicus OX=10116 GN=H2afy PE=1 SV=4"	"Q02874"	"Core histone macro-H2A.1 OS=Rattus norvegicus OX=10116 GN=H2afy PE=1 SV=4"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"3"	"722.96051"	"1444.91374"	"1444.91394"	"-0.13"	"-0.00010"	"5/80"	"5"	"80"	"1775713.6585083"	"HCD"	"MS2"	"0"	"142.8"	"100.000"	"49.2811"	"14601"	"14601"	"14574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.4"	""	"178.8"	""	"201.2"	""	"243.3"	""	"284.4"	"274.5"	""	"495"	"15"	"33.000"	"26.000"	"0.862134854714129"	"25"	"0.008648"	"0.3725"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQELVSGLK"	"[K].iQELVSGLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"722.96100"	"1444.91472"	"1444.91394"	"0.54"	"0.00039"	"7/84"	"7"	"84"	"2456884.96990967"	"HCD"	"MS2"	"64.17966"	"151.2"	"100.000"	"59.8848"	"18853"	"18853"	"18825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.2"	""	"186.5"	""	"210.1"	""	"317.5"	""	"242.7"	"243.5"	""	"495"	"36"	"33.000"	"26.000"	"0.00588267970939656"	"22"	"0"	"0.0001693"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQELVSGLK"	"[K].iQELVSGLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"722.96106"	"1444.91484"	"1444.91394"	"0.63"	"0.00045"	"7/84"	"7"	"84"	"4122463.93231201"	"HCD"	"MS2"	"50.74412"	"227.2"	"100.000"	"60.1149"	"19000"	"19000"	"18979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"331.3"	""	"280.9"	""	"298.7"	""	"480.4"	""	"391.9"	"370.1"	""	"494"	"35"	"33.000"	"26.000"	"0.00772141603679617"	"21"	"0.0001308"	"0.000256"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGLQDTIK"	"[K].vLGLQDTIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"722.96106"	"1444.91484"	"1444.91394"	"0.63"	"0.00045"	"8/74"	"8"	"74"	"5330524.27008057"	"HCD"	"MS2"	"36.71616"	"372.0"	"100.000"	"49.7644"	"14794"	"14794"	"14766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"405.8"	""	"398.0"	""	"357.0"	""	"742.2"	"13.0"	"814.5"	"807.3"	""	"494"	"26"	"33.000"	"26.000"	"0.0646691203030089"	"19"	"0.0001889"	"0.0004642"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQELVSGLK"	"[K].iQELVSGLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"482.31070"	"1444.91755"	"1444.91394"	"2.50"	"0.00120"	"11/84"	"11"	"84"	"1647737.15332031"	"HCD"	"MS2"	"0"	"62.5"	"100.000"	"59.9700"	"18888"	"18888"	"18857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.1"	""	"79.8"	""	"91.8"	""	"126.3"	""	"109.1"	"99.9"	""	"501"	"33"	"33.000"	"26.000"	"0.0128176299802847"	"26"	"0.0001889"	"0.0004617"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAATPAK"	"[K].kAAATPAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"1"	"3"	"3"	"0.1250"	"0.0000"	"1"	"1"	"1"	"482.31958"	"1444.94419"	"1444.94546"	"-0.88"	"-0.00042"	"11/70"	"11"	"70"	"2393734.08734131"	"HCD"	"MS2"	"0"	"196.9"	"100.000"	"24.7403"	"4593"	"4593"	"4571"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.1"	""	"265.7"	""	"276.3"	""	"349.2"	"6.8"	"332.2"	"360.1"	""	"241"	"8"	"30.000"	"23.000"	"2.01830616561186"	"20"	"0.0001889"	"0.0006191"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEFAFEYAR"	"[R].iAEFAFEYAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"723.38538"	"1445.76348"	"1445.76263"	"0.58"	"0.00042"	"7/80"	"7"	"80"	"2196594.88635254"	"HCD"	"MS2"	"38.34399"	"125.9"	"100.000"	"61.2496"	"19463"	"19463"	"19443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.8"	""	"191.2"	""	"193.0"	""	"196.5"	"0.0"	"224.5"	"208.4"	""	"814"	"48"	"36.000"	"29.000"	"0.000694375532324271"	"24"	"0"	"8.838E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEFAFEYAR"	"[R].iAEFAFEYAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"723.38617"	"1445.76506"	"1445.76263"	"1.68"	"0.00122"	"8/80"	"8"	"80"	"2074410.3369751"	"HCD"	"MS2"	"26.09906"	"114.7"	"100.000"	"61.1341"	"19363"	"19363"	"19337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.2"	""	"175.8"	""	"172.4"	""	"200.7"	""	"193.8"	"187.5"	""	"817"	"39"	"36.000"	"29.000"	"0.0048105204018325"	"23"	"0.0001308"	"0.0002836"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFLINYYNR"	"[K].nFLINYYNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"723.39069"	"1445.77410"	"1445.77387"	"0.16"	"0.00012"	"6/82"	"6"	"82"	"4735486.72021484"	"HCD"	"MS2"	"43.46081"	"317.5"	"90.941"	"49.8499"	"14829"	"14829"	"14798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"419.6"	""	"405.5"	""	"418.1"	""	"553.1"	"0.6"	"582.8"	"630.4"	""	"841"	"18"	"36.000"	"29.000"	"0.652778737687373"	"19"	"0.0003839"	"0.002018"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFLINYYNR"	"[K].nFLINYYNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"723.39105"	"1445.77483"	"1445.77387"	"0.67"	"0.00048"	"6/82"	"6"	"82"	"6217101.86035156"	"HCD"	"MS2"	"48.90465"	"420.9"	"100.000"	"49.5698"	"14668"	"14668"	"14639"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"575.2"	""	"507.1"	""	"536.8"	""	"737.2"	"5.6"	"790.7"	"838.3"	""	"843"	"20"	"36.000"	"29.000"	"0.407190445494206"	"20"	"0.0001889"	"0.000727"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPSLSPIDK"	"[K].mPSLSPIDk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"723.42682"	"1445.84636"	"1445.84381"	"1.77"	"0.00128"	"6/74"	"6"	"74"	"4594336.20214844"	"HCD"	"MS2"	"7.866572"	"336.7"	"100.000"	"47.9560"	"14059"	"14059"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"491.4"	""	"478.5"	""	"426.8"	""	"464.0"	"0.9"	"534.3"	"794.7"	""	"858"	"30"	"36.000"	"29.000"	"0.0467151010040043"	"19"	"0.0001859"	"0.0003532"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPSLSPIDK"	"[K].mPSLSPIDk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"723.42767"	"1445.84807"	"1445.84381"	"2.95"	"0.00213"	"6/74"	"6"	"74"	"4387178.3347168"	"HCD"	"MS2"	"0"	"329.1"	"100.000"	"47.6945"	"13904"	"13904"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"459.3"	""	"430.8"	""	"468.9"	""	"456.3"	"0.6"	"510.0"	"792.5"	""	"851"	"32"	"36.000"	"29.000"	"0.0297097887934837"	"19"	"0.0004166"	"0.002134"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVIMGAPGSGK"	"[R].aVIMGAPGSGk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"723.43018"	"1445.85307"	"1445.85504"	"-1.36"	"-0.00098"	"18/80"	"18"	"80"	"7304806.32818604"	"HCD"	"MS2"	"0"	"411.3"	"100.000"	"37.3647"	"9739"	"9739"	"9713"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"679.0"	""	"656.1"	""	"676.3"	""	"492.9"	""	"640.1"	"743.2"	""	"821"	"59"	"36.000"	"29.000"	"5.39899793614913E-05"	"27"	"0"	"2.712E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVIMGAPGSGK"	"[R].aVIMGAPGSGk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"723.43042"	"1445.85356"	"1445.85504"	"-1.02"	"-0.00074"	"10/80"	"10"	"80"	"4293918.66552734"	"HCD"	"MS2"	"0"	"248.4"	"100.000"	"37.3264"	"9680"	"9680"	"9656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"412.8"	""	"365.8"	""	"411.5"	""	"290.2"	"0.6"	"418.2"	"450.5"	""	"833"	"57"	"36.000"	"29.000"	"8.50383853954859E-05"	"22"	"0"	"1.248E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QINLEGSVK"	"[R].qINLEGSVk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7115"	"0.0000"	"1"	"1"	"1"	"723.43994"	"1445.87261"	"1445.87280"	"-0.13"	"-0.00010"	"8/84"	"8"	"84"	"3425548.15356445"	"HCD"	"MS2"	"0"	"270.8"	"100.000"	"38.9285"	"10338"	"10338"	"10310"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"357.3"	""	"327.5"	""	"326.2"	""	"442.6"	"0.8"	"534.3"	"581.6"	""	"778"	"52"	"35.000"	"28.000"	"0.000244314701578381"	""	"0"	"0.0001228"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QINLEGSVK"	"[R].qINLEGSVk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"723.44000"	"1445.87273"	"1445.87280"	"-0.05"	"-0.00004"	"8/84"	"8"	"84"	"3571342.7322998"	"HCD"	"MS2"	"0"	"272.7"	"100.000"	"39.0308"	"10423"	"10423"	"10398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.5"	""	"312.9"	""	"338.8"	""	"450.4"	"2.1"	"546.7"	"582.5"	""	"776"	"56"	"35.000"	"28.000"	"9.41524716891977E-05"	""	"0"	"0.000149"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"482.63669"	"1445.89551"	"1445.89795"	"-1.69"	"-0.00081"	"10/72"	"10"	"72"	"4268418.24359131"	"HCD"	"MS2"	"7.671689"	"145.2"	"100.000"	"67.7687"	"22116"	"22116"	"22090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.6"	""	"178.8"	""	"201.7"	""	"252.0"	""	"249.0"	"298.1"	""	"682"	"34"	"35.000"	"28.000"	"0.0132970217456701"	"16"	"0.0001889"	"0.0007202"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"482.63705"	"1445.89661"	"1445.89795"	"-0.93"	"-0.00045"	"10/72"	"10"	"72"	"17640613.7438354"	"HCD"	"MS2"	"5.366488"	"402.6"	"72.560"	"68.0638"	"22236"	"22236"	"22218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"505.3"	""	"527.3"	"3.7"	"585.9"	""	"653.3"	""	"701.5"	"848.3"	""	"682"	"38"	"35.000"	"28.000"	"0.00577769189952538"	"17"	"0.0003839"	"0.001613"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"482.63715"	"1445.89688"	"1445.89795"	"-0.74"	"-0.00036"	"10/72"	"10"	"72"	"850587.540100098"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"68.4400"	"22390"	"22390"	"22362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.9"	""	"43.6"	""	"57.8"	""	"62.5"	"0.5"	"62.1"	"71.8"	""	"665"	"38"	"35.000"	"28.000"	"0.0052094473081096"	"20"	"0.0001889"	"0.0005473"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"482.63715"	"1445.89688"	"1445.89795"	"-0.74"	"-0.00036"	"10/72"	"10"	"72"	"3104365.08251953"	"HCD"	"MS2"	"0"	"109.9"	"100.000"	"67.8484"	"22097"	"22097"	"22074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.8"	""	"152.1"	""	"149.4"	""	"180.0"	"2.8"	"188.5"	"218.4"	""	"665"	"35"	"35.000"	"28.000"	"0.0117433403955826"	"20"	"0.0001889"	"0.0006093"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"482.63751"	"1445.89798"	"1445.89795"	"0.02"	"0.00001"	"10/72"	"10"	"72"	"19179824.5471191"	"HCD"	"MS2"	"4.053664"	"351.5"	"58.697"	"68.1460"	"22219"	"22219"	"22202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"455.6"	""	"463.2"	""	"497.1"	""	"566.0"	""	"635.6"	"720.7"	""	"665"	"38"	"35.000"	"28.000"	"0.00558202336025751"	"17"	"0.0002277"	"0.00132"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"723.45264"	"1445.89800"	"1445.89795"	"0.03"	"0.00002"	"8/72"	"8"	"72"	"616403.489746094"	"HCD"	"MS2"	"0"	"49.1"	"100.000"	"68.6312"	"22468"	"22468"	"22442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.9"	""	"61.4"	""	"65.5"	""	"84.1"	"0.3"	"86.2"	"100.3"	""	"665"	"41"	"35.000"	"28.000"	"0.0028628042260138"	"19"	"0"	"0.0001207"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"723.45270"	"1445.89812"	"1445.89795"	"0.12"	"0.00008"	"14/72"	"14"	"72"	"3374031.87426758"	"HCD"	"MS2"	"4.622984"	"242.0"	"100.000"	"68.3042"	"22334"	"22334"	"22314"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.9"	""	"334.0"	""	"345.6"	""	"391.7"	""	"423.1"	"492.0"	""	"665"	"43"	"35.000"	"28.000"	"0.00165497580755496"	"22"	"0"	"0.000162"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"723.45270"	"1445.89812"	"1445.89795"	"0.12"	"0.00008"	"14/72"	"14"	"72"	"33852171.1394043"	"HCD"	"MS2"	"0.1227842"	"986.4"	"42.680"	"68.0283"	"22171"	"22171"	"22154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1267.3"	""	"1271.3"	""	"1435.8"	""	"1642.9"	""	"1697.7"	"2038.5"	""	"665"	"43"	"35.000"	"28.000"	"0.00159511371671699"	"25"	"0.0001889"	"0.0006024"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"723.45276"	"1445.89824"	"1445.89795"	"0.20"	"0.00014"	"8/72"	"8"	"72"	"5888607.08898926"	"HCD"	"MS2"	"1.136445"	"410.3"	"100.000"	"68.3421"	"22299"	"22299"	"22282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"534.0"	""	"544.7"	""	"607.6"	""	"646.4"	""	"710.3"	"846.0"	""	"665"	"41"	"35.000"	"28.000"	"0.00251068165698757"	"22"	"0.0001308"	"0.0002149"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"723.45306"	"1445.89885"	"1445.89795"	"0.62"	"0.00045"	"14/72"	"14"	"72"	"56840879.1376953"	"HCD"	"MS2"	"0.1030088"	"830.0"	"21.607"	"67.9808"	"22203"	"22203"	"22186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1104.1"	""	"1070.2"	""	"1231.9"	""	"1372.9"	"10.1"	"1417.0"	"1656.4"	""	"660"	"43"	"35.000"	"28.000"	"0.00157584660307038"	"22"	"0.0001889"	"0.0007082"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"723.45313"	"1445.89897"	"1445.89795"	"0.71"	"0.00051"	"8/72"	"8"	"72"	"2721533.02337646"	"HCD"	"MS2"	"0"	"190.8"	"100.000"	"67.6906"	"22084"	"22084"	"22058"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"239.7"	""	"255.0"	""	"285.0"	""	"320.0"	"3.2"	"326.5"	"378.0"	""	"666"	"54"	"35.000"	"28.000"	"0.000127480639524502"	"27"	"0"	"0.0001623"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"723.45319"	"1445.89910"	"1445.89795"	"0.79"	"0.00057"	"8/72"	"8"	"72"	"767709.228088379"	"HCD"	"MS2"	"19.43332"	"64.2"	"100.000"	"68.6787"	"22436"	"22436"	"22410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.3"	""	"80.7"	""	"96.8"	""	"98.5"	""	"115.2"	"140.2"	""	"665"	"51"	"35.000"	"28.000"	"0.000263506692384757"	"21"	"0"	"7.423E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGK"	"[K].iLDLIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"723.45374"	"1445.90019"	"1445.89795"	"1.55"	"0.00112"	"14/72"	"14"	"72"	"1475976.03381348"	"HCD"	"MS2"	"15.77187"	"113.5"	"100.000"	"67.7414"	"22054"	"22054"	"22029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.1"	""	"146.5"	""	"154.6"	""	"185.3"	"1.2"	"204.8"	"227.6"	""	"651"	"44"	"35.000"	"28.000"	"0.00119550388812127"	"21"	"0"	"0.0001335"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNAMILAGK"	"[K].aVNAMILAGk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q3KR97"	"Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 OS=Rattus norvegicus OX=10116 GN=Baiap2l1 PE=1 SV=1"	"Q3KR97"	"Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 OS=Rattus norvegicus OX=10116 GN=Baiap2l1 PE=1 SV=1"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"723.46136"	"1445.91545"	"1445.89143"	"16.62"	"0.01201"	"9/88"	"9"	"88"	"2077176.81158447"	"HCD"	"MS2"	"21.60271"	"172.5"	"100.000"	"48.9393"	"14414"	"14414"	"14383"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.1"	""	"208.5"	""	"224.7"	""	"287.6"	""	"344.8"	"352.7"	""	"415"	"16"	"33.000"	"26.000"	"0.555927427399949"	"25"	"0.0007444"	"0.007209"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGAQIIK"	"[K].kGAqIIk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"P0C2C0"	"39S ribosomal protein L22, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl22 PE=1 SV=1"	"P0C2C0"	"39S ribosomal protein L22, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl22 PE=1 SV=1"	"1"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"723.48608"	"1445.96489"	"1445.96586"	"-0.67"	"-0.00049"	"5/62"	"5"	"62"	"242019.936401367"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"30.5094"	"6941"	"6941"	"6917"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.7"	""	"26.3"	""	"33.4"	""	"41.3"	""	"46.6"	"49.6"	""	"67"	"25"	"25.000"	"18.000"	"0.01172316309545"	"18"	"0.009176"	"0.4118"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWEEYYK"	"[K].aWEEYYk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1;Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"723.88751"	"1446.76775"	"1446.76694"	"0.56"	"0.00040"	"6/50"	"6"	"50"	"1155817.33416748"	"HCD"	"MS2"	"0"	"121.1"	"100.000"	"44.2219"	"12539"	"12539"	"12508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.9"	""	"152.6"	""	"173.8"	""	"191.4"	""	"231.4"	"234.9"	""	"935"	"21"	"36.000"	"29.000"	"0.415701522598591"	"21"	"0.0003839"	"0.001589"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFPLQTIPR"	"[R].fVFPLQTIPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"3"	"3"	"0.7027"	"0.0000"	"1"	"1"	"1"	"482.95987"	"1446.86505"	"1446.86704"	"-1.37"	"-0.00066"	"6/80"	"6"	"80"	"1683637.30114746"	"HCD"	"MS2"	"12.46971"	"19.7"	"100.000"	"69.0994"	"22659"	"22659"	"22634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.4"	""	"18.5"	""	"23.4"	""	"37.8"	""	"45.0"	"44.2"	""	"856"	"37"	"36.000"	"29.000"	"0.0094502602573209"	"26"	"0.0001308"	"0.0003115"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFPLQTIPR"	"[R].fVFPLQTIPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"723.93634"	"1446.86540"	"1446.86704"	"-1.13"	"-0.00082"	"11/80"	"11"	"80"	"1493910.18737793"	"HCD"	"MS2"	"14.81677"	"75.6"	"100.000"	"69.2838"	"22734"	"22734"	"22714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.1"	""	"90.7"	""	"89.5"	""	"136.7"	""	"158.8"	"173.6"	""	"850"	"26"	"36.000"	"29.000"	"0.114390229166894"	"16"	"0"	"0.0001053"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFPLQTIPR"	"[R].fVFPLQTIPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"723.93689"	"1446.86650"	"1446.86704"	"-0.37"	"-0.00027"	"7/80"	"7"	"80"	"4762554.88934326"	"HCD"	"MS2"	"8.942303"	"204.0"	"100.000"	"68.9611"	"22603"	"22603"	"22586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.1"	""	"216.0"	""	"186.2"	""	"450.3"	""	"452.5"	"463.8"	""	"817"	"36"	"36.000"	"29.000"	"0.0101435987351324"	"24"	"0"	"0.0001566"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGIANTLGNK"	"[K].tGIANTLGNk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P97573"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Inpp5d PE=1 SV=1"	"Q9WVR3; P97573"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1; Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Inpp5d PE=1 SV=1"	"0"	"2"	"2"	"0.9636"	"0.0000"	"1"	"1"	"1"	"723.93701"	"1446.86675"	"1446.86805"	"-0.90"	"-0.00065"	"15/92"	"15"	"92"	"657574.999267578"	"HCD"	"MS2"	"0"	"68.4"	"100.000"	"36.0263"	"9190"	"9190"	"9161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.0"	""	"87.4"	""	"103.2"	""	"99.1"	"0.2"	"129.9"	"123.4"	""	"817"	"55"	"36.000"	"29.000"	"0.000138099485590143"	"18"	"0"	"1.59E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSWAVTPK"	"[K].tVSWAVTPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"723.93719"	"1446.86711"	"1446.87207"	"-3.43"	"-0.00248"	"14/76"	"14"	"76"	"3079555.51879883"	"HCD"	"MS2"	"0"	"227.9"	"100.000"	"43.2141"	"12131"	"12131"	"12116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"363.8"	""	"398.7"	""	"273.9"	""	"375.4"	""	"379.0"	"365.4"	""	"799"	"48"	"36.000"	"29.000"	"0.00061590933095335"	""	"0.0001308"	"0.0002842"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFPLQTIPR"	"[R].fVFPLQTIPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"723.93726"	"1446.86724"	"1446.86704"	"0.14"	"0.00010"	"8/80"	"8"	"80"	"6137449.89428711"	"HCD"	"MS2"	"5.200037"	"255.6"	"100.000"	"69.1721"	"22637"	"22637"	"22618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"213.6"	""	"255.6"	""	"226.4"	""	"555.2"	"0.8"	"585.2"	"598.0"	""	"799"	"46"	"36.000"	"29.000"	"0.000896430828551215"	"25"	"0"	"0.0001403"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFPLQTIPR"	"[R].fVFPLQTIPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.93750"	"1446.86772"	"1446.86704"	"0.47"	"0.00034"	"10/80"	"10"	"80"	"843535.621765137"	"HCD"	"MS2"	"41.67318"	"49.6"	"100.000"	"69.5042"	"22773"	"22773"	"22746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.7"	""	"66.2"	""	"67.9"	""	"81.5"	""	"100.2"	"98.8"	""	"799"	"14"	"36.000"	"29.000"	"1.73586834556543"	"13"	"0.0003146"	"0.00148"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSWAVTPK"	"[K].tVSWAVTPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"723.93762"	"1446.86797"	"1446.87207"	"-2.84"	"-0.00205"	"14/76"	"14"	"76"	"3991930.45654297"	"HCD"	"MS2"	"0"	"286.4"	"100.000"	"42.9051"	"11960"	"11960"	"11945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"456.8"	""	"498.2"	""	"342.4"	""	"504.6"	""	"440.1"	"464.9"	""	"792"	"45"	"35.000"	"28.000"	"0.0013295209524021"	"25"	"0.0001308"	"0.0002673"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSWAVTPK"	"[K].tVSWAVTPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"482.96161"	"1446.87027"	"1446.87207"	"-1.24"	"-0.00060"	"7/76"	"7"	"76"	"65220918.8455811"	"HCD"	"MS2"	"18.61444"	"527.1"	"31.078"	"42.6622"	"11862"	"11862"	"11836"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"806.0"	""	"962.7"	""	"632.6"	""	"944.1"	""	"820.6"	"820.3"	""	"785"	"46"	"35.000"	"28.000"	"0.00102527333160169"	"28"	"0.0001889"	"0.0004122"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSWAVTPK"	"[K].tVSWAVTPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"482.96198"	"1446.87137"	"1446.87207"	"-0.48"	"-0.00023"	"7/76"	"7"	"76"	"51666712.3231201"	"HCD"	"MS2"	"23.98642"	"971.0"	"64.716"	"42.9299"	"12016"	"12016"	"11987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1509.9"	""	"1744.2"	""	"1123.1"	""	"1691.0"	"4.0"	"1579.9"	"1529.7"	""	"798"	"44"	"36.000"	"29.000"	"0.00162544730843841"	"27"	"0.0001889"	"0.0006802"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSWAVTPK"	"[K].tVSWAVTPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"723.94025"	"1446.87322"	"1446.87207"	"0.79"	"0.00057"	"14/76"	"14"	"76"	"31675469.6863403"	"HCD"	"MS2"	"0"	"1938.0"	"100.000"	"42.9184"	"12011"	"12011"	"11987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3190.1"	""	"3694.9"	""	"2134.4"	""	"3404.8"	"4.1"	"2988.8"	"2895.5"	""	"767"	"47"	"35.000"	"28.000"	"0.000758167856982899"	"24"	"0.0001889"	"0.0005701"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSWAVTPK"	"[K].tVSWAVTPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"723.94049"	"1446.87370"	"1446.87207"	"1.13"	"0.00082"	"14/76"	"14"	"76"	"25915405.8716431"	"HCD"	"MS2"	"14.93857"	"1488.8"	"100.000"	"42.6278"	"11848"	"11848"	"11820"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2464.9"	""	"2814.8"	""	"1656.5"	""	"2635.4"	"6.5"	"2285.3"	"2203.5"	""	"767"	"45"	"35.000"	"28.000"	"0.00110094435320647"	"23"	"0.0001889"	"0.0005508"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGIPVFAWK"	"[K].aGIPVFAWk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"482.96698"	"1446.88639"	"1446.88733"	"-0.65"	"-0.00031"	"7/66"	"7"	"66"	"5825940.25018311"	"HCD"	"MS2"	"18.02974"	"169.9"	"100.000"	"65.3949"	"21103"	"21103"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"282.1"	""	"237.7"	""	"245.8"	""	"274.9"	""	"278.1"	"287.9"	""	"694"	"32"	"35.000"	"28.000"	"0.019784700248142"	"26"	"0.0001308"	"0.0002359"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGIPVFAWK"	"[K].aGIPVFAWk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"482.96719"	"1446.88703"	"1446.88733"	"-0.21"	"-0.00010"	"6/66"	"6"	"66"	"7748799.29730225"	"HCD"	"MS2"	"12.39547"	"213.7"	"100.000"	"65.3640"	"21143"	"21143"	"21123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"340.7"	""	"306.6"	""	"317.4"	""	"349.7"	""	"332.4"	"377.1"	""	"705"	"36"	"35.000"	"28.000"	"0.00805673578189839"	"28"	"7.476E-05"	"0.0001856"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGIPVFAWK"	"[K].aGIPVFAWk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"723.94739"	"1446.88750"	"1446.88733"	"0.12"	"0.00009"	"9/66"	"9"	"66"	"6537796.71234131"	"HCD"	"MS2"	"1.896554"	"418.3"	"100.000"	"65.6556"	"21210"	"21210"	"21193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"653.8"	""	"580.5"	""	"624.3"	""	"626.4"	"15.8"	"700.9"	"756.8"	""	"698"	"39"	"35.000"	"28.000"	"0.0039886453884163"	""	"0.0001308"	"0.0002086"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGIPVFAWK"	"[K].aGIPVFAWk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"723.94751"	"1446.88774"	"1446.88733"	"0.29"	"0.00021"	"8/66"	"8"	"66"	"10383440.3557129"	"HCD"	"MS2"	"28.3747"	"583.5"	"100.000"	"65.3463"	"21083"	"21083"	"21065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"996.0"	""	"851.8"	""	"850.8"	""	"928.2"	"7.0"	"919.2"	"961.6"	""	"698"	"40"	"35.000"	"28.000"	"0.00337928971835176"	""	"0.0001859"	"0.0003453"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGIPVFAWK"	"[K].aGIPVFAWk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"723.94763"	"1446.88799"	"1446.88733"	"0.46"	"0.00033"	"8/66"	"8"	"66"	"13274794.4435425"	"HCD"	"MS2"	"30.539"	"705.2"	"100.000"	"65.3199"	"21125"	"21125"	"21107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1191.3"	""	"1012.0"	""	"1034.0"	""	"1082.0"	"9.7"	"1139.0"	"1199.0"	""	"681"	"40"	"35.000"	"28.000"	"0.00317773089421376"	""	"0.0001859"	"0.0003745"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTLPAVFK"	"[K].nVTLPAVFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"482.97403"	"1446.90754"	"1446.90846"	"-0.64"	"-0.00031"	"7/80"	"7"	"80"	"7770792.3314209"	"HCD"	"MS2"	"26.96962"	"255.4"	"100.000"	"56.8344"	"17665"	"17665"	"17637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.1"	""	"388.4"	""	"382.2"	""	"521.7"	""	"418.5"	"338.4"	""	"510"	"33"	"34.000"	"27.000"	"0.0121210482615415"	"20"	"0.0001308"	"0.0002254"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTLPAVFK"	"[K].nVTLPAVFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"723.95795"	"1446.90862"	"1446.90846"	"0.11"	"0.00008"	"14/80"	"14"	"80"	"6010735.60168457"	"HCD"	"MS2"	"5.790113"	"398.1"	"100.000"	"56.8207"	"17659"	"17659"	"17637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"610.1"	""	"651.2"	""	"635.3"	""	"771.1"	""	"596.5"	"493.6"	""	"478"	"43"	"33.000"	"26.000"	"0.00110763813816973"	""	"7.476E-05"	"0.0001896"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTLPAVFK"	"[K].nVTLPAVFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"482.97440"	"1446.90863"	"1446.90846"	"0.12"	"0.00006"	"6/80"	"6"	"80"	"7877943.98760986"	"HCD"	"MS2"	"30.59377"	"256.3"	"100.000"	"56.6505"	"17535"	"17535"	"17515"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"374.9"	""	"404.5"	""	"370.7"	""	"524.0"	""	"418.1"	"331.3"	""	"478"	"31"	"33.000"	"26.000"	"0.0201557007105662"	"23"	"0.0001859"	"0.0003567"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTLPAVFK"	"[K].nVTLPAVFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"723.95819"	"1446.90911"	"1446.90846"	"0.45"	"0.00032"	"14/80"	"14"	"80"	"5791175.88793945"	"HCD"	"MS2"	"8.470956"	"392.3"	"100.000"	"56.6180"	"17522"	"17522"	"17499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"603.7"	""	"618.1"	""	"608.6"	""	"772.2"	"5.9"	"629.6"	"466.2"	""	"478"	"43"	"33.000"	"26.000"	"0.00111275076351987"	""	"0"	"0.0001758"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAASTDYYK"	"[R].aAASTDYYk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"724.39520"	"1447.78313"	"1447.78332"	"-0.13"	"-0.00009"	"9/68"	"9"	"68"	"212583.377624512"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"31.8352"	"7441"	"7441"	"7414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.1"	""	"23.3"	""	"40.9"	""	"37.5"	""	"47.6"	"51.4"	""	"909"	"24"	"36.000"	"29.000"	"0.16654587767744"	"18"	"0.0007076"	"0.006925"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTPSFWILAR"	"[K].qTPSFWILAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A5"	"NEDD8-activating enzyme E1 regulatory subunit OS=Rattus norvegicus OX=10116 GN=Nae1 PE=1 SV=1"	"Q9Z1A5"	"NEDD8-activating enzyme E1 regulatory subunit OS=Rattus norvegicus OX=10116 GN=Nae1 PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"724.41602"	"1447.82475"	"1447.82590"	"-0.79"	"-0.00057"	"6/94"	"6"	"94"	"2190478.46105957"	"HCD"	"MS2"	"19.72936"	"162.5"	"100.000"	"62.6252"	"19972"	"19972"	"19945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"242.1"	""	"266.1"	""	"302.5"	""	"202.3"	""	"247.6"	"277.8"	""	"986"	"22"	"36.000"	"29.000"	"0.319776775739282"	"19"	"7.476E-05"	"0.0001962"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTPSFWILAR"	"[K].qTPSFWILAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A5"	"NEDD8-activating enzyme E1 regulatory subunit OS=Rattus norvegicus OX=10116 GN=Nae1 PE=1 SV=1"	"Q9Z1A5"	"NEDD8-activating enzyme E1 regulatory subunit OS=Rattus norvegicus OX=10116 GN=Nae1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"724.41620"	"1447.82512"	"1447.82590"	"-0.54"	"-0.00039"	"7/94"	"7"	"94"	"1779983.37677002"	"HCD"	"MS2"	"43.633"	"125.2"	"100.000"	"62.6814"	"20048"	"20048"	"20019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"189.5"	""	"193.1"	""	"219.2"	""	"172.9"	"3.5"	"202.0"	"203.6"	""	"986"	"30"	"36.000"	"29.000"	"0.0550613581155817"	"20"	"0.00103"	"0.01293"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSDLLDWK"	"[R].lSDLLDWk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A2RRU1"	"Glycogen [starch] synthase, muscle OS=Rattus norvegicus OX=10116 GN=Gys1 PE=1 SV=1"	"A2RRU1"	"Glycogen [starch] synthase, muscle OS=Rattus norvegicus OX=10116 GN=Gys1 PE=1 SV=1"	"0"	"3"	"3"	"0.1000"	"0.0000"	"1"	"1"	"3"	"483.28912"	"1447.85282"	"1447.85609"	"-2.26"	"-0.00109"	"7/64"	"7"	"64"	"507817.433898926"	"HCD"	"MS2"	"28.09998"	"21.1"	"100.000"	"75.0577"	"25040"	"25040"	"25009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.5"	""	"25.3"	""	"32.2"	""	"38.7"	""	"33.2"	"47.9"	""	"831"	"10"	"36.000"	"29.000"	"4.16457826421367"	"22"	"0.0008453"	"0.008068"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMASFLYK"	"[K].mMASFLYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"724.90588"	"1448.80449"	"1448.80459"	"-0.07"	"-0.00005"	"7/56"	"7"	"56"	"2165865.98968506"	"HCD"	"MS2"	"9.820555"	"171.0"	"100.000"	"60.4631"	"19142"	"19142"	"19123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.5"	""	"289.2"	""	"243.1"	""	"177.0"	"1.7"	"294.8"	"267.1"	""	"1013"	"36"	"37.000"	"30.000"	"0.0119558222510596"	"20"	"0.0001889"	"0.0004384"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMASFLYK"	"[K].mMASFLYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"724.90601"	"1448.80474"	"1448.80459"	"0.10"	"0.00007"	"6/56"	"6"	"56"	"1541603.92633057"	"HCD"	"MS2"	"5.416141"	"118.4"	"100.000"	"60.4311"	"19076"	"19076"	"19049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"216.7"	""	"179.3"	""	"149.9"	""	"141.6"	""	"208.0"	"229.0"	""	"1017"	"19"	"37.000"	"30.000"	"0.585181997778246"	"16"	"0.0001889"	"0.0003858"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVLADALK"	"[R].mNVLADALk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"724.92865"	"1448.85002"	"1448.85471"	"-3.23"	"-0.00234"	"8/78"	"8"	"78"	"1940028.70532227"	"HCD"	"MS2"	"0"	"159.0"	"100.000"	"45.3333"	"12943"	"12943"	"12912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.6"	""	"219.6"	""	"236.8"	""	"300.6"	""	"270.9"	"272.6"	""	"945"	"31"	"36.000"	"29.000"	"0.0371023837353259"	""	"0.0006037"	"0.004406"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"724.92950"	"1448.85173"	"1448.85134"	"0.27"	"0.00020"	"7/78"	"7"	"78"	"9061318.82824707"	"HCD"	"MS2"	"4.150385"	"587.1"	"100.000"	"40.3228"	"10906"	"10906"	"10885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"843.0"	""	"863.7"	""	"874.2"	""	"879.3"	"0.4"	"1006.5"	"1091.0"	""	"893"	"34"	"36.000"	"29.000"	"0.018273488456945"	"25"	"0.0001859"	"0.0003396"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"483.62219"	"1448.85202"	"1448.85134"	"0.47"	"0.00023"	"7/78"	"7"	"78"	"9162958.8013916"	"HCD"	"MS2"	"31.70589"	"304.5"	"79.116"	"40.4398"	"10954"	"10954"	"10933"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"384.6"	""	"394.6"	""	"433.1"	""	"466.6"	""	"604.3"	"610.5"	""	"893"	"43"	"36.000"	"29.000"	"0.00223780099814577"	"26"	"0.0001308"	"0.0003031"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"724.92999"	"1448.85271"	"1448.85134"	"0.95"	"0.00069"	"7/78"	"7"	"78"	"8240407.65899658"	"HCD"	"MS2"	"0"	"528.5"	"100.000"	"40.4713"	"11011"	"11011"	"10989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"764.5"	""	"783.4"	""	"805.0"	""	"782.0"	"1.1"	"909.6"	"956.7"	""	"880"	"31"	"36.000"	"29.000"	"0.0377096651901362"	"24"	"0.0001889"	"0.0003897"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIPYLEK"	"[K].dLIPYLEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"724.94189"	"1448.87651"	"1448.87649"	"0.02"	"0.00001"	"5/68"	"5"	"68"	"2079436.07110596"	"HCD"	"MS2"	"27.83293"	"132.7"	"100.000"	"61.0190"	"19369"	"19369"	"19347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.4"	""	"156.2"	""	"138.4"	""	"213.8"	"1.4"	"292.1"	"295.8"	""	"615"	"30"	"34.000"	"27.000"	"0.0316115011673891"	"26"	"0.0001889"	"0.0004632"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIPYLEK"	"[K].dLIPYLEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"724.94214"	"1448.87700"	"1448.87649"	"0.35"	"0.00026"	"5/68"	"5"	"68"	"2039148.5680542"	"HCD"	"MS2"	"32.26136"	"139.3"	"100.000"	"60.8578"	"19250"	"19250"	"19225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.5"	""	"144.0"	""	"150.2"	""	"254.4"	""	"305.4"	"296.0"	""	"615"	"32"	"34.000"	"27.000"	"0.0180237485588064"	"27"	"0.0001889"	"0.0004399"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLQYLPAIR"	"[R].vFLQYLPAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"724.94684"	"1448.88640"	"1448.88269"	"2.56"	"0.00186"	"7/86"	"7"	"86"	"1622597.22381592"	"HCD"	"MS2"	"22.13446"	"125.4"	"100.000"	"74.9194"	"24983"	"24983"	"24961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.7"	""	"146.7"	""	"174.5"	""	"206.2"	""	"232.9"	"270.5"	""	"553"	"23"	"34.000"	"27.000"	"0.154772976813398"	"19"	"0.0004166"	"0.002335"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLQYLPAIR"	"[R].vFLQYLPAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"724.94684"	"1448.88640"	"1448.88269"	"2.56"	"0.00186"	"5/86"	"5"	"86"	"1661073.37719727"	"HCD"	"MS2"	"29.91842"	"128.3"	"100.000"	"74.9350"	"25041"	"25041"	"25023"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.4"	""	"159.4"	""	"172.5"	""	"189.9"	"1.3"	"244.1"	"271.5"	""	"553"	"8"	"34.000"	"27.000"	"3.98744894696626"	"17"	"0.001217"	"0.01702"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KASQQAK"	"[K].kASQqAk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q9WV48"	"SH3 and multiple ankyrin repeat domains protein 1 OS=Rattus norvegicus OX=10116 GN=Shank1 PE=1 SV=1"	"Q9WV48"	"SH3 and multiple ankyrin repeat domains protein 1 OS=Rattus norvegicus OX=10116 GN=Shank1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"483.63882"	"1448.90192"	"1448.90399"	"-1.43"	"-0.00069"	"4/60"	"4"	"60"	"802599.179626465"	"HCD"	"MS2"	"40.76002"	"74.8"	"100.000"	"22.5882"	"3774"	"3774"	"3766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.4"	""	"119.6"	""	"126.6"	""	"128.1"	""	"143.3"	"94.9"	""	"373"	"2"	"32.000"	"25.000"	"11.6594707202666"	"13"	"0.004631"	"0.1356"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KASQQAK"	"[K].kASqQAk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q9WV48"	"SH3 and multiple ankyrin repeat domains protein 1 OS=Rattus norvegicus OX=10116 GN=Shank1 PE=1 SV=1"	"Q9WV48"	"SH3 and multiple ankyrin repeat domains protein 1 OS=Rattus norvegicus OX=10116 GN=Shank1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"4"	"483.63882"	"1448.90192"	"1448.90399"	"-1.43"	"-0.00069"	"4/60"	"4"	"60"	"802599.179626465"	"HCD"	"MS2"	"40.76002"	"74.8"	"100.000"	"22.5882"	"3774"	"3774"	"3766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.4"	""	"119.6"	""	"126.6"	""	"128.1"	""	"143.3"	"94.9"	""	"373"	"2"	"32.000"	"25.000"	"11.6594707202666"	"13"	"0.004631"	"0.1356"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFQVWLK"	"[R].lGFQVWLk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"724.95477"	"1448.90227"	"1448.90298"	"-0.49"	"-0.00035"	"6/66"	"6"	"66"	"1037389.32086182"	"HCD"	"MS2"	"7.77894"	"89.9"	"100.000"	"70.8208"	"23310"	"23310"	"23283"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.2"	""	"121.7"	""	"142.6"	""	"157.6"	""	"173.5"	"161.4"	""	"371"	"36"	"32.000"	"25.000"	"0.00505061092648453"	"25"	"0.0001889"	"0.0005809"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFQVWLK"	"[R].lGFQVWLk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"724.95490"	"1448.90251"	"1448.90298"	"-0.32"	"-0.00023"	"9/66"	"9"	"66"	"919328.109436035"	"HCD"	"MS2"	"0"	"73.1"	"100.000"	"70.7087"	"23316"	"23316"	"23290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.0"	""	"102.5"	""	"120.4"	""	"132.0"	""	"135.3"	"131.2"	""	"371"	"30"	"32.000"	"25.000"	"0.0172323264747678"	"23"	"0.0001889"	"0.0007348"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSNIFVIGK"	"[R].lSNIFVIGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"483.64578"	"1448.92279"	"1448.92411"	"-0.91"	"-0.00044"	"11/76"	"11"	"76"	"4459811.97351074"	"HCD"	"MS2"	"38.09888"	"147.5"	"100.000"	"65.6717"	"21216"	"21216"	"21193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.5"	""	"214.7"	""	"250.9"	""	"233.6"	""	"253.0"	"248.8"	""	"303"	"25"	"31.000"	"24.000"	"0.0471425025071562"	"21"	"0.0001889"	"0.001078"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSNIFVIGK"	"[R].lSNIFVIGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"483.64587"	"1448.92307"	"1448.92411"	"-0.72"	"-0.00035"	"8/76"	"8"	"76"	"4072514.95562744"	"HCD"	"MS2"	"36.66395"	"127.1"	"100.000"	"65.6475"	"21259"	"21259"	"21235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.7"	""	"183.9"	""	"203.6"	""	"201.4"	""	"226.1"	"214.5"	""	"303"	"26"	"31.000"	"24.000"	"0.0424045669924606"	"24"	"0.0003839"	"0.002055"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSNIFVIGK"	"[R].lSNIFVIGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"724.96527"	"1448.92327"	"1448.92411"	"-0.58"	"-0.00042"	"7/76"	"7"	"76"	"10425057.4486084"	"HCD"	"MS2"	"27.3166"	"312.8"	"46.144"	"65.6335"	"21253"	"21253"	"21235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.0"	""	"444.2"	""	"535.0"	""	"523.5"	""	"526.4"	"511.7"	""	"303"	"33"	"31.000"	"24.000"	"0.00824921519056268"	"20"	"0.0001859"	"0.0003653"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSNIFVIGK"	"[R].lSNIFVIGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"724.96552"	"1448.92375"	"1448.92411"	"-0.24"	"-0.00018"	"8/76"	"8"	"76"	"5824728.89520264"	"HCD"	"MS2"	"32.55996"	"360.3"	"87.915"	"65.7408"	"21244"	"21244"	"21225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"466.6"	""	"527.6"	""	"593.8"	""	"577.4"	""	"634.5"	"616.8"	""	"302"	"29"	"31.000"	"24.000"	"0.0184067429437655"	"20"	"0.0001889"	"0.0004125"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQIMIENLR"	"[R].fGQIMIENLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P4Z6"	"Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lcmt1 PE=2 SV=1"	"Q6P4Z6"	"Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lcmt1 PE=2 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"725.40778"	"1449.80828"	"1449.80854"	"-0.18"	"-0.00013"	"6/86"	"6"	"86"	"915780.702148438"	"HCD"	"MS2"	"0"	"78.2"	"100.000"	"59.6690"	"18818"	"18818"	"18789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.2"	""	"123.6"	""	"118.0"	""	"104.7"	"1.4"	"130.0"	"138.2"	""	"1004"	"34"	"37.000"	"30.000"	"0.0215131357239515"	"18"	"0.0001308"	"0.0002509"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQIMIENLR"	"[R].fGQIMIENLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P4Z6"	"Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lcmt1 PE=2 SV=1"	"Q6P4Z6"	"Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lcmt1 PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"725.40991"	"1449.81255"	"1449.80854"	"2.77"	"0.00201"	"8/86"	"8"	"86"	"758657.304260254"	"HCD"	"MS2"	"0"	"67.4"	"100.000"	"59.5332"	"18709"	"18709"	"18681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.6"	""	"94.4"	""	"115.9"	""	"93.0"	"1.2"	"119.1"	"116.5"	""	"1018"	"32"	"37.000"	"30.000"	"0.0289546141799515"	"20"	"0.0001308"	"0.0002833"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSGNDFVLLR"	"[K].lSSGNDFVLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"725.41614"	"1449.82500"	"1449.82629"	"-0.89"	"-0.00065"	"9/100"	"9"	"100"	"3130428.3494873"	"HCD"	"MS2"	"11.68106"	"169.8"	"100.000"	"55.1774"	"16987"	"16987"	"16965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"317.8"	""	"271.6"	""	"201.2"	""	"264.7"	""	"289.8"	"261.8"	""	"991"	"59"	"36.000"	"29.000"	"6.51693904351253E-05"	"21"	"0"	"2.419E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSGNDFVLLR"	"[K].lSSGNDFVLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"725.41626"	"1449.82524"	"1449.82629"	"-0.73"	"-0.00053"	"9/100"	"9"	"100"	"3092298.40350342"	"HCD"	"MS2"	"12.01197"	"173.3"	"100.000"	"54.9760"	"16851"	"16851"	"16828"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.6"	""	"279.6"	""	"210.2"	""	"272.3"	"1.4"	"295.7"	"281.4"	""	"984"	"59"	"36.000"	"29.000"	"5.59712624625128E-05"	"21"	"0"	"1.811E-05"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMEELKR"	"[K].sVMEELkR.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q27W02"	"Protein mago nashi homolog OS=Rattus norvegicus OX=10116 GN=Magoh PE=2 SV=1"	"Q27W02"	"Protein mago nashi homolog OS=Rattus norvegicus OX=10116 GN=Magoh PE=2 SV=1"	"1"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"483.95480"	"1449.84986"	"1449.84996"	"-0.07"	"-0.00003"	"6/66"	"6"	"66"	"5351302.39593506"	"HCD"	"MS2"	"37.27664"	"349.1"	"100.000"	"35.1528"	"8831"	"8831"	"8810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"502.4"	""	"432.4"	""	"472.0"	""	"549.6"	""	"661.2"	"696.3"	""	"754"	"0"	"35.000"	"28.000"	"34.861121157471"	"13"	"0.002199"	"0.03278"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMEELKR"	"[K].sVMEELkR.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q27W02"	"Protein mago nashi homolog OS=Rattus norvegicus OX=10116 GN=Magoh PE=2 SV=1"	"Q27W02"	"Protein mago nashi homolog OS=Rattus norvegicus OX=10116 GN=Magoh PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.95486"	"1449.85004"	"1449.84996"	"0.06"	"0.00003"	"6/66"	"6"	"66"	"5947419.19140625"	"HCD"	"MS2"	"26.69773"	"334.6"	"82.630"	"35.0838"	"8760"	"8760"	"8734"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"437.9"	""	"429.8"	""	"456.9"	""	"524.9"	"1.9"	"650.0"	"672.9"	""	"753"	"3"	"35.000"	"28.000"	"18.440172549222"	"13"	"0.0006037"	"0.005461"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"725.90009"	"1450.79289"	"1450.79422"	"-0.91"	"-0.00066"	"4/76"	"4"	"76"	"125999.163818359"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"32.4762"	"7703"	"7703"	"7672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.4"	""	"14.4"	""	"16.3"	""	"16.0"	""	"24.0"	"26.8"	""	"1018"	"10"	"37.000"	"30.000"	"5.32988430957908"	"14"	"0.004346"	"0.1212"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"725.90094"	"1450.79460"	"1450.79422"	"0.27"	"0.00019"	"12/76"	"12"	"76"	"322384.613830566"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"32.4818"	"7748"	"7748"	"7718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.3"	""	"30.6"	""	"42.0"	""	"57.8"	"1.5"	"59.5"	"66.4"	""	"977"	"36"	"36.000"	"29.000"	"0.0125853288519576"	"24"	"0.0001889"	"0.001106"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"725.91699"	"1450.82671"	"1450.83060"	"-2.68"	"-0.00195"	"8/84"	"8"	"84"	"2614781.29595947"	"HCD"	"MS2"	"31.81792"	"202.6"	"100.000"	"43.6258"	"12246"	"12246"	"12221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"250.5"	""	"244.4"	""	"233.6"	""	"378.8"	"4.7"	"393.5"	"417.6"	""	"844"	"34"	"36.000"	"29.000"	"0.0152164187355133"	"26"	"0.0001308"	"0.0002518"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"725.91748"	"1450.82768"	"1450.83060"	"-2.01"	"-0.00146"	"7/84"	"7"	"84"	"2086420.24871826"	"HCD"	"MS2"	"100"	"174.5"	"100.000"	"43.8390"	"12382"	"12382"	"12359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.0"	""	"219.0"	""	"204.5"	""	"309.5"	""	"338.8"	"350.8"	""	"857"	"24"	"36.000"	"29.000"	"0.167475323847044"	"28"	"0.0001308"	"0.0002069"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWFLQAAK"	"[K].eWFLQAAk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.2381"	"0.0000"	"1"	"1"	"1"	"484.28632"	"1450.84439"	"1450.84586"	"-1.01"	"-0.00049"	"8/62"	"8"	"62"	"5948069.32421875"	"HCD"	"MS2"	"5.574966"	"199.4"	"100.000"	"55.8879"	"17278"	"17278"	"17253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.7"	""	"298.1"	""	"265.2"	""	"311.5"	""	"332.3"	"370.5"	""	"741"	"21"	"35.000"	"28.000"	"0.297021722485135"	""	"0.0006037"	"0.00465"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWFLQAAK"	"[K].eWFLQAAk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"725.92621"	"1450.84514"	"1450.84586"	"-0.49"	"-0.00036"	"14/62"	"14"	"62"	"6061714.15722656"	"HCD"	"MS2"	"0"	"480.7"	"100.000"	"55.5989"	"17106"	"17106"	"17083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"813.5"	""	"657.4"	""	"662.3"	""	"753.7"	"2.5"	"771.6"	"885.5"	""	"744"	"47"	"35.000"	"28.000"	"0.00074394861550338"	"28"	"0.0001889"	"0.0005348"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWFLQAAK"	"[K].eWFLQAAk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"725.92621"	"1450.84514"	"1450.84586"	"-0.49"	"-0.00036"	"14/62"	"14"	"62"	"6959813.52325439"	"HCD"	"MS2"	"0"	"505.6"	"100.000"	"55.8050"	"17244"	"17244"	"17221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"849.0"	""	"697.5"	""	"691.7"	""	"797.8"	""	"814.3"	"932.4"	""	"744"	"47"	"35.000"	"28.000"	"0.000713744771529347"	""	"0.0001889"	"0.000587"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWFLQAAK"	"[K].eWFLQAAk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"725.92633"	"1450.84538"	"1450.84586"	"-0.33"	"-0.00024"	"14/62"	"14"	"62"	"10718788.4154053"	"HCD"	"MS2"	"9.739046"	"541.1"	"67.898"	"56.1064"	"17367"	"17367"	"17349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"867.1"	""	"729.2"	""	"785.9"	""	"815.4"	"4.4"	"926.5"	"992.1"	""	"736"	"41"	"35.000"	"28.000"	"0.00295017527326666"	"22"	"0.0001889"	"0.0008822"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWFLQAAK"	"[K].eWFLQAAk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"484.28674"	"1450.84568"	"1450.84586"	"-0.12"	"-0.00006"	"8/62"	"8"	"62"	"6015389.69195557"	"HCD"	"MS2"	"8.565107"	"211.1"	"100.000"	"55.7140"	"17153"	"17153"	"17131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.5"	""	"279.2"	""	"294.8"	""	"337.4"	""	"354.0"	"388.9"	""	"729"	"21"	"35.000"	"28.000"	"0.291539585950062"	""	"0.0006037"	"0.004265"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWFLQAAK"	"[K].eWFLQAAk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"725.92700"	"1450.84673"	"1450.84586"	"0.60"	"0.00044"	"14/62"	"14"	"62"	"10436539.6735229"	"HCD"	"MS2"	"9.665968"	"658.5"	"82.156"	"55.9003"	"17229"	"17229"	"17211"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1063.9"	""	"892.6"	""	"938.0"	""	"958.2"	"5.6"	"1160.2"	"1215.2"	""	"726"	"39"	"35.000"	"28.000"	"0.00439447122478825"	"20"	"0.0001889"	"0.001005"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"725.93085"	"1450.85442"	"1450.85575"	"-0.92"	"-0.00067"	"7/66"	"7"	"66"	"4122225.97497559"	"HCD"	"MS2"	"0"	"330.3"	"100.000"	"44.0296"	"12410"	"12410"	"12390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"598.6"	""	"482.4"	""	"403.6"	""	"520.3"	""	"555.3"	"568.2"	""	"709"	"42"	"35.000"	"28.000"	"0.00219086813849068"	"25"	"0.0001889"	"0.000443"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"725.93170"	"1450.85613"	"1450.85575"	"0.26"	"0.00019"	"7/66"	"7"	"66"	"4320388.28088379"	"HCD"	"MS2"	"0"	"332.9"	"100.000"	"44.2725"	"12559"	"12559"	"12540"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"598.6"	""	"503.6"	""	"382.0"	""	"545.5"	"0.3"	"559.2"	"559.3"	""	"677"	"44"	"35.000"	"28.000"	"0.00142088416080956"	"25"	"0.0001889"	"0.0006588"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANTFVAELK"	"[R].aNTFVAELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"725.93719"	"1450.86711"	"1450.86699"	"0.09"	"0.00006"	"8/86"	"8"	"86"	"9054822.1663208"	"HCD"	"MS2"	"3.010393"	"722.5"	"100.000"	"47.6386"	"13929"	"13929"	"13906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1190.8"	""	"909.8"	""	"1014.2"	""	"1155.9"	"10.2"	"1206.9"	"1349.6"	""	"555"	"56"	"34.000"	"27.000"	"7.64298465176341E-05"	"24"	"0.0001859"	"0.0003383"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANTFVAELK"	"[R].aNTFVAELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"725.93805"	"1450.86882"	"1450.86699"	"1.27"	"0.00092"	"8/86"	"8"	"86"	"8074758.56866455"	"HCD"	"MS2"	"3.482756"	"637.8"	"100.000"	"47.3384"	"13758"	"13758"	"13736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1093.1"	""	"822.6"	""	"901.9"	""	"980.9"	"0.2"	"1082.4"	"1153.2"	""	"553"	"54"	"34.000"	"27.000"	"0.000117137280112698"	"23"	"0.0001308"	"0.0002641"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFQDITQK"	"[K].iFQDITQk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"725.93842"	"1450.86955"	"1450.86699"	"1.77"	"0.00128"	"9/70"	"9"	"70"	"625119.180908203"	"HCD"	"MS2"	"100"	"72.3"	"100.000"	"50.6140"	"15089"	"15089"	"15058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.7"	""	"99.8"	""	"99.5"	""	"118.2"	""	"134.7"	"136.3"	""	"548"	"14"	"34.000"	"27.000"	"1.13697407681815"	"21"	"0.00109"	"0.01477"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFQDITQK"	"[K].iFQDITQk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"725.93964"	"1450.87200"	"1450.86699"	"3.45"	"0.00250"	"7/70"	"7"	"70"	"1144490.82635498"	"HCD"	"MS2"	"0"	"114.4"	"100.000"	"50.7662"	"15201"	"15201"	"15174"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.0"	""	"148.4"	""	"167.1"	""	"158.4"	""	"237.0"	"220.6"	""	"533"	"22"	"34.000"	"27.000"	"0.168150132303971"	"22"	"0.0001889"	"0.0008683"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVFLATWK"	"[R].qVFLATWk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"725.94458"	"1450.88188"	"1450.88224"	"-0.25"	"-0.00018"	"7/70"	"7"	"70"	"3288036.66339111"	"HCD"	"MS2"	"11.30335"	"271.4"	"100.000"	"57.2101"	"17818"	"17818"	"17797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"381.4"	""	"358.4"	""	"351.9"	""	"449.5"	""	"503.9"	"529.7"	""	"479"	"39"	"33.000"	"26.000"	"0.00307118174546117"	"23"	"0.0001889"	"0.0005066"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVFLATWK"	"[R].qVFLATWk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"725.94489"	"1450.88249"	"1450.88224"	"0.17"	"0.00013"	"7/70"	"7"	"70"	"2676735.07373047"	"HCD"	"MS2"	"22.31246"	"233.3"	"100.000"	"57.0803"	"17711"	"17711"	"17691"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"293.0"	""	"303.0"	""	"326.3"	""	"377.8"	""	"445.6"	"472.1"	""	"470"	"40"	"33.000"	"26.000"	"0.00219314760687293"	"23"	"0.0001889"	"0.0005307"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPHTLLQR"	"[K].kPHTLLQR.[V]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"3"	"363.48663"	"1450.92470"	"1450.92584"	"-0.78"	"-0.00028"	"5/70"	"5"	"70"	"4871733.56707764"	"HCD"	"MS2"	"13.42799"	"314.0"	"100.000"	"25.7339"	"4998"	"4998"	"4971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"417.8"	""	"431.1"	""	"506.9"	""	"480.1"	"1.8"	"578.2"	"558.5"	""	"220"	"1"	"30.000"	"23.000"	"8.21093634251073"	"13"	"0.002829"	"0.04768"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAEAYLGK"	"[K].eIAEAYLGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"726.42700"	"1451.84673"	"1451.85100"	"-2.94"	"-0.00214"	"14/70"	"14"	"70"	"6305318.02282715"	"HCD"	"MS2"	"0"	"474.5"	"100.000"	"45.6929"	"13085"	"13085"	"13063"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"698.2"	""	"576.7"	""	"623.4"	""	"719.5"	"0.0"	"903.7"	"978.1"	""	"748"	"45"	"35.000"	"28.000"	"0.00122425419884685"	""	"0.0001308"	"0.0002092"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAEAYLGK"	"[K].eIAEAYLGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"726.42761"	"1451.84795"	"1451.85100"	"-2.10"	"-0.00153"	"14/70"	"14"	"70"	"4905194.21087646"	"HCD"	"MS2"	"32.10442"	"391.2"	"100.000"	"45.9066"	"13222"	"13222"	"13203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"566.3"	""	"506.6"	""	"506.9"	""	"589.9"	""	"771.0"	"769.7"	""	"700"	"47"	"35.000"	"28.000"	"0.0007212204696445"	""	"0"	"0.0001614"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAEAYLGK"	"[K].eIAEAYLGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"484.62091"	"1451.84818"	"1451.85100"	"-1.94"	"-0.00094"	"9/70"	"9"	"70"	"6869023.16040039"	"HCD"	"MS2"	"0"	"240.9"	"100.000"	"45.9410"	"13236"	"13236"	"13216"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"376.3"	""	"294.2"	""	"318.7"	""	"354.4"	""	"478.6"	"465.2"	""	"699"	"27"	"35.000"	"28.000"	"0.0707045202948055"	"18"	"0.0001889"	"0.0009696"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAEAYLGK"	"[K].eIAEAYLGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"484.62140"	"1451.84964"	"1451.85100"	"-0.94"	"-0.00045"	"9/70"	"9"	"70"	"6731925.57025146"	"HCD"	"MS2"	"0"	"234.9"	"100.000"	"45.6997"	"13088"	"13088"	"13063"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"357.3"	""	"281.8"	""	"316.6"	""	"376.4"	""	"437.8"	"458.6"	""	"710"	"32"	"35.000"	"28.000"	"0.0225023747496209"	"21"	"0.0001889"	"0.0008176"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLLPDTK"	"[R].sGYLLPDTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"484.62189"	"1451.85111"	"1451.85100"	"0.07"	"0.00004"	"8/78"	"8"	"78"	"8399145.23950195"	"HCD"	"MS2"	"13.49158"	"306.8"	"100.000"	"41.9030"	"11598"	"11598"	"11570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"503.3"	""	"439.4"	""	"467.7"	""	"418.7"	"4.5"	"545.5"	"524.2"	""	"677"	"24"	"35.000"	"28.000"	"0.133216700541781"	"20"	"0.0006037"	"0.00383"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLLPDTK"	"[R].sGYLLPDTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"726.42926"	"1451.85124"	"1451.85100"	"0.17"	"0.00012"	"13/78"	"13"	"78"	"8222651.66119385"	"HCD"	"MS2"	"0"	"552.1"	"100.000"	"41.6667"	"11457"	"11457"	"11435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"927.1"	""	"769.5"	""	"853.4"	""	"790.1"	"3.2"	"950.2"	"927.9"	""	"677"	"43"	"35.000"	"28.000"	"0.00171221648088054"	"23"	"7.476E-05"	"0.0001869"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLLPDTK"	"[R].sGYLLPDTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"726.42950"	"1451.85173"	"1451.85100"	"0.50"	"0.00037"	"8/78"	"8"	"78"	"8355626.5881958"	"HCD"	"MS2"	"4.592162"	"546.0"	"100.000"	"41.8916"	"11593"	"11593"	"11570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"947.3"	""	"727.4"	""	"828.4"	""	"765.0"	"2.4"	"957.1"	"937.6"	""	"669"	"55"	"35.000"	"28.000"	"0.000100321986260137"	"24"	"0"	"0.0001563"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQQQTFK"	"[K].tLQQQTFk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"726.43457"	"1451.86186"	"1451.86224"	"-0.26"	"-0.00019"	"14/76"	"14"	"76"	"1647924.39569092"	"HCD"	"MS2"	"0"	"148.7"	"100.000"	"34.7699"	"8631"	"8631"	"8606"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.6"	""	"142.7"	""	"159.7"	""	"322.9"	"2.5"	"315.3"	"297.5"	""	"619"	"40"	"34.000"	"27.000"	"0.00330872485119412"	"21"	"0.0001859"	"0.0003346"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQQQTFK"	"[K].tLQQQTFk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"726.43463"	"1451.86199"	"1451.86224"	"-0.17"	"-0.00012"	"14/76"	"14"	"76"	"1431460.02191162"	"HCD"	"MS2"	"0"	"128.1"	"100.000"	"34.8524"	"8708"	"8708"	"8682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.4"	""	"112.0"	""	"142.9"	""	"276.9"	""	"252.7"	"277.5"	""	"610"	"41"	"34.000"	"27.000"	"0.00228191697655902"	"24"	"0.0001308"	"0.0002929"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNDIMLLK"	"[R].fNDIMLLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97594"	"Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"P97594"	"Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"726.43854"	"1451.86980"	"1451.86963"	"0.12"	"0.00008"	"7/68"	"7"	"68"	"1051370.58496094"	"HCD"	"MS2"	"0"	"99.0"	"100.000"	"67.2385"	"21901"	"21901"	"21888"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.3"	""	"178.7"	""	"126.8"	""	"106.2"	""	"110.1"	"179.4"	""	"552"	"42"	"34.000"	"27.000"	"0.00170180220513769"	"24"	"0.0001308"	"0.0002349"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNDIMLLK"	"[R].fNDIMLLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97594"	"Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"P97594"	"Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"726.44012"	"1451.87297"	"1451.86963"	"2.30"	"0.00167"	"7/68"	"7"	"68"	"1096971.1295166"	"HCD"	"MS2"	"0"	"101.0"	"100.000"	"67.3290"	"21890"	"21890"	"21877"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.4"	""	"173.0"	""	"146.3"	""	"107.5"	""	"100.9"	"177.4"	""	"507"	"39"	"34.000"	"27.000"	"0.00326571261354209"	"23"	"0.0001308"	"0.0002614"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPNWFMK"	"[R].gDPNWFMk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"484.92828"	"1452.77030"	"1452.77098"	"-0.47"	"-0.00023"	"6/64"	"6"	"64"	"10060877.7891846"	"HCD"	"MS2"	"12.99883"	"367.3"	"100.000"	"51.8846"	"15658"	"15658"	"15638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"615.7"	""	"510.6"	""	"521.7"	""	"362.4"	"0.1"	"743.4"	"728.4"	""	"883"	"22"	"36.000"	"29.000"	"0.258779999632944"	"14"	"0.001217"	"0.0177"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPNWFMK"	"[R].gDPNWFMk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"726.88904"	"1452.77080"	"1452.77098"	"-0.12"	"-0.00009"	"14/64"	"14"	"64"	"17169018.0632935"	"HCD"	"MS2"	"0.5490076"	"1139.8"	"82.226"	"51.6360"	"15507"	"15507"	"15490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1973.7"	""	"1571.7"	""	"1621.2"	""	"1050.6"	"8.9"	"2414.6"	"2166.6"	""	"876"	"29"	"36.000"	"29.000"	"0.0530241982495111"	"14"	"0.0002277"	"0.00131"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPNWFMK"	"[R].gDPNWFMk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"726.88910"	"1452.77092"	"1452.77098"	"-0.04"	"-0.00003"	"14/64"	"14"	"64"	"16169188.074585"	"HCD"	"MS2"	"2.492777"	"1240.1"	"92.782"	"51.8358"	"15639"	"15639"	"15622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2176.8"	""	"1739.2"	""	"1772.8"	""	"1160.5"	"16.5"	"2577.8"	"2310.3"	""	"877"	"28"	"36.000"	"29.000"	"0.0677594071737595"	"14"	"0.0002277"	"0.00119"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPNWFMK"	"[R].gDPNWFMk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"484.92886"	"1452.77204"	"1452.77098"	"0.73"	"0.00035"	"6/64"	"6"	"64"	"9365361.79870605"	"HCD"	"MS2"	"18.62976"	"337.8"	"100.000"	"51.6888"	"15528"	"15528"	"15506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"563.1"	""	"449.7"	""	"474.1"	""	"361.0"	""	"713.9"	"643.9"	""	"887"	"23"	"36.000"	"29.000"	"0.211297142648202"	"14"	"0.001966"	"0.02813"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWDDLFNK"	"[R].gWDDLFNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"3"	"484.93427"	"1452.78824"	"1452.78874"	"-0.34"	"-0.00016"	"8/60"	"8"	"60"	"2807765.78497314"	"HCD"	"MS2"	"4.497804"	"116.9"	"100.000"	"61.1318"	"19362"	"19362"	"19337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.0"	""	"134.6"	""	"162.8"	""	"201.8"	""	"236.3"	"233.5"	""	"865"	"14"	"36.000"	"29.000"	"1.66335945734616"	"21"	"0.002393"	"0.03516"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWDDLFNK"	"[R].gWDDLFNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.5862"	"0.0000"	"1"	"1"	"1"	"484.93430"	"1452.78833"	"1452.78874"	"-0.28"	"-0.00013"	"6/60"	"6"	"60"	"3467185.61602783"	"HCD"	"MS2"	"12.51401"	"136.5"	"100.000"	"61.2562"	"19466"	"19466"	"19443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"185.8"	""	"161.1"	""	"165.1"	""	"235.4"	"0.5"	"276.9"	"270.5"	""	"865"	"29"	"36.000"	"29.000"	"0.0594273154192913"	"26"	"0.0008453"	"0.008076"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWDDLFNK"	"[R].gWDDLFNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"726.89844"	"1452.78960"	"1452.78874"	"0.59"	"0.00043"	"12/60"	"12"	"60"	"7367793.72460938"	"HCD"	"MS2"	"17.87274"	"640.8"	"100.000"	"61.2793"	"19476"	"19476"	"19459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"897.9"	""	"709.6"	""	"783.6"	""	"1096.3"	"8.3"	"1275.0"	"1309.8"	""	"846"	"29"	"36.000"	"29.000"	"0.0579882987087733"	"21"	"0.0002277"	"0.001343"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWDDLFNK"	"[R].gWDDLFNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"726.89990"	"1452.79253"	"1452.78874"	"2.61"	"0.00190"	"14/60"	"14"	"60"	"6620520.71728516"	"HCD"	"MS2"	"15.55861"	"551.9"	"100.000"	"61.1547"	"19371"	"19371"	"19353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"744.4"	""	"592.7"	""	"682.3"	""	"940.3"	""	"1135.3"	"1145.0"	""	"853"	"27"	"36.000"	"29.000"	"0.0937387235742729"	"21"	"0.0003839"	"0.001655"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLTDAYFK"	"[K].hLTDAYFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"484.94595"	"1452.82331"	"1452.82512"	"-1.25"	"-0.00060"	"6/58"	"6"	"58"	"11198714.5372925"	"HCD"	"MS2"	"35.06033"	"336.3"	"59.901"	"36.7503"	"9487"	"9487"	"9462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"519.6"	""	"435.0"	""	"441.6"	""	"562.7"	""	"618.4"	"610.2"	""	"791"	"18"	"35.000"	"28.000"	"0.565127560591141"	"14"	"0.0001889"	"0.0005853"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLTDAYFK"	"[K].hLTDAYFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"484.94638"	"1452.82459"	"1452.82512"	"-0.37"	"-0.00018"	"11/58"	"11"	"58"	"13348089.9447632"	"HCD"	"MS2"	"38.79631"	"477.6"	"81.275"	"36.6338"	"9396"	"9396"	"9370"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"753.7"	""	"625.2"	""	"620.6"	""	"775.0"	""	"876.7"	"878.9"	""	"784"	"25"	"35.000"	"28.000"	"0.133440010362792"	"15"	"0.0001889"	"0.0003817"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLPLYTLHR"	"[R].gPGLPLYTLHR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"484.95526"	"1452.85123"	"1452.85245"	"-0.84"	"-0.00041"	"8/80"	"8"	"80"	"13396394.5150146"	"HCD"	"MS2"	"26.59114"	"216.2"	"100.000"	"40.1057"	"10818"	"10818"	"10789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.5"	""	"293.2"	""	"270.9"	""	"353.8"	"5.7"	"432.7"	"438.3"	""	"604"	"37"	"34.000"	"27.000"	"0.00575449136824901"	"18"	"0.0001889"	"0.000496"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLPLYTLHR"	"[R].gPGLPLYTLHR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"726.92938"	"1452.85149"	"1452.85245"	"-0.66"	"-0.00048"	"5/80"	"5"	"80"	"2479435.02148438"	"HCD"	"MS2"	"11.42546"	"214.7"	"100.000"	"40.4527"	"11004"	"11004"	"10973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.9"	""	"300.1"	""	"300.2"	""	"288.1"	""	"437.4"	"439.5"	""	"604"	"11"	"34.000"	"27.000"	"2.56452503460967"	"15"	"0.00103"	"0.01131"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLPLYTLHR"	"[R].gPGLPLYTLHR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"484.95547"	"1452.85187"	"1452.85245"	"-0.40"	"-0.00019"	"15/80"	"15"	"80"	"18537422.0256958"	"HCD"	"MS2"	"9.988783"	"246.2"	"100.000"	"40.2738"	"10930"	"10930"	"10909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.5"	""	"329.9"	""	"317.8"	""	"397.8"	"6.9"	"500.3"	"497.8"	""	"604"	"40"	"34.000"	"27.000"	"0.00287744441535143"	"24"	"0"	"0.0001108"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLPLYTLHR"	"[R].gPGLPLYTLHR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"484.95554"	"1452.85205"	"1452.85245"	"-0.27"	"-0.00013"	"13/80"	"13"	"80"	"14526220.9040527"	"HCD"	"MS2"	"10.57147"	"164.1"	"60.054"	"40.3991"	"10937"	"10937"	"10917"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.6"	""	"237.5"	""	"229.1"	""	"234.6"	"1.8"	"316.9"	"305.2"	""	"609"	"44"	"34.000"	"27.000"	"0.00113132477260089"	"23"	"0"	"0.0001118"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLPLYTLHR"	"[R].gPGLPLYTLHR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"484.95560"	"1452.85224"	"1452.85245"	"-0.15"	"-0.00007"	"12/80"	"12"	"80"	"11308392.0735474"	"HCD"	"MS2"	"18.26215"	"166.9"	"74.633"	"40.5910"	"11060"	"11060"	"11037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"238.7"	""	"240.9"	""	"235.6"	""	"230.6"	"0.1"	"313.0"	"322.4"	""	"615"	"29"	"34.000"	"27.000"	"0.0405363947106096"	"16"	"0.0002277"	"0.001309"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYVWTLK"	"[R].nAYVWTLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.3478"	"0.0000"	"1"	"1"	"1"	"484.95789"	"1452.85910"	"1452.86151"	"-1.65"	"-0.00080"	"6/70"	"6"	"70"	"7407092.20782471"	"HCD"	"MS2"	"45.0496"	"238.1"	"100.000"	"51.8955"	"15613"	"15613"	"15586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.3"	""	"338.4"	""	"343.0"	""	"321.8"	"0.3"	"437.0"	"440.7"	""	"577"	"23"	"34.000"	"27.000"	"0.161490068031339"	""	"0.0005564"	"0.00361"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYVWTLK"	"[R].nAYVWTLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"726.93323"	"1452.85918"	"1452.86151"	"-1.60"	"-0.00116"	"6/70"	"6"	"70"	"21040960.6446533"	"HCD"	"MS2"	"49.58965"	"621.3"	"36.903"	"51.8703"	"15603"	"15603"	"15586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1017.1"	""	"866.5"	""	"876.6"	""	"736.8"	""	"1195.0"	"1200.9"	""	"577"	"25"	"34.000"	"27.000"	"0.0970835877648291"	"24"	"0.0007793"	"0.007301"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYVWTLK"	"[R].nAYVWTLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"484.95801"	"1452.85947"	"1452.86151"	"-1.40"	"-0.00068"	"6/70"	"6"	"70"	"8691331.63519287"	"HCD"	"MS2"	"47.80568"	"280.7"	"100.000"	"52.0589"	"15730"	"15730"	"15702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"432.2"	""	"398.7"	""	"399.2"	""	"364.0"	""	"523.7"	"541.6"	""	"577"	"22"	"34.000"	"27.000"	"0.203303950397022"	""	"0.0004166"	"0.002365"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYVWTLK"	"[R].nAYVWTLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"726.93427"	"1452.86125"	"1452.86151"	"-0.17"	"-0.00013"	"6/70"	"6"	"70"	"19011100.4932861"	"HCD"	"MS2"	"46.45319"	"761.8"	"51.841"	"52.0706"	"15735"	"15735"	"15718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1242.7"	""	"1100.3"	""	"1060.8"	""	"957.9"	"1.3"	"1448.6"	"1404.0"	""	"551"	"25"	"34.000"	"27.000"	"0.0905986243063333"	"26"	"0.0006396"	"0.0063"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPYFIDLK"	"[R].vPYFIDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"726.94592"	"1452.88457"	"1452.88666"	"-1.44"	"-0.00105"	"6/56"	"6"	"56"	"2312678.87103271"	"HCD"	"MS2"	"0"	"157.5"	"100.000"	"66.8147"	"21735"	"21735"	"21715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.5"	""	"233.7"	""	"223.2"	""	"238.1"	""	"276.0"	"270.7"	""	"350"	"38"	"32.000"	"25.000"	"0.00247763911492489"	""	"0.0001889"	"0.0007316"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPYFIDLK"	"[R].vPYFIDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"726.94720"	"1452.88713"	"1452.88666"	"0.33"	"0.00024"	"6/56"	"6"	"56"	"2102137.66766357"	"HCD"	"MS2"	"16.99308"	"157.1"	"100.000"	"66.9258"	"21728"	"21728"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.2"	""	"261.7"	""	"224.3"	""	"222.6"	"1.2"	"250.5"	"259.5"	""	"319"	"38"	"32.000"	"25.000"	"0.00254542723984259"	""	"0.0002277"	"0.001143"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYVWSQK"	"[R].nAYVWSQk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"727.41443"	"1453.82158"	"1453.82037"	"0.83"	"0.00061"	"7/70"	"7"	"70"	"1215319.51574707"	"HCD"	"MS2"	"0"	"132.4"	"100.000"	"38.5321"	"10175"	"10175"	"10151"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.5"	""	"188.0"	""	"197.9"	""	"189.4"	""	"239.8"	"235.9"	""	"745"	"33"	"35.000"	"28.000"	"0.0193253014501038"	"19"	"0.0001889"	"0.0004724"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFTMELAK"	"[R].rFTMELAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"1"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"485.29080"	"1453.85785"	"1453.86013"	"-1.56"	"-0.00076"	"6/74"	"6"	"74"	"19588632.5563965"	"HCD"	"MS2"	"23.01163"	"312.1"	"28.707"	"38.1373"	"10056"	"10056"	"10033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"486.1"	""	"496.8"	""	"490.6"	""	"380.4"	""	"538.1"	"564.0"	""	"543"	"19"	"34.000"	"27.000"	"0.344167481580405"	"22"	"0.000494"	"0.002697"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFTMELAK"	"[R].rFTMELAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"485.29108"	"1453.85868"	"1453.86013"	"-1.00"	"-0.00048"	"7/74"	"7"	"74"	"13572805.3410645"	"HCD"	"MS2"	"25.40781"	"370.9"	"47.791"	"38.0624"	"9982"	"9982"	"9959"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"585.8"	""	"597.1"	""	"617.9"	""	"475.1"	""	"600.5"	"633.5"	""	"547"	"16"	"34.000"	"27.000"	"0.663677861005041"	"21"	"0.0006396"	"0.006269"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTFGISLEK"	"[K].tTFGISLEk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"727.43652"	"1453.86577"	"1453.86665"	"-0.61"	"-0.00044"	"8/78"	"8"	"78"	"1764240.3927002"	"HCD"	"MS2"	"20.88005"	"161.1"	"100.000"	"51.4650"	"15487"	"15487"	"15462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.7"	""	"231.5"	""	"236.6"	""	"242.6"	""	"271.6"	"294.2"	""	"457"	"50"	"33.000"	"26.000"	"0.000245972301314417"	""	"0"	"0.0001399"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTFGISLEK"	"[K].tTFGISLEk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"727.43726"	"1453.86724"	"1453.86665"	"0.40"	"0.00029"	"8/78"	"8"	"78"	"1905666.11029053"	"HCD"	"MS2"	"33.0318"	"175.5"	"100.000"	"51.2306"	"15341"	"15341"	"15314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"248.9"	""	"270.8"	""	"276.6"	""	"272.9"	""	"280.2"	"312.2"	""	"445"	"52"	"33.000"	"26.000"	"0.000139421584889595"	""	"0.0001308"	"0.0002461"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIPLENLSIR"	"[R].gIIPLENLSIR.[E]"	"N-Term(TMT6plex)"	"1"	"3"	"P63035"	"Cytohesin-2 OS=Rattus norvegicus OX=10116 GN=Cyth2 PE=1 SV=1"	"P97696; P63035; P97694"	"Cytohesin-3 OS=Rattus norvegicus OX=10116 GN=Cyth3 PE=2 SV=1; Cytohesin-2 OS=Rattus norvegicus OX=10116 GN=Cyth2 PE=1 SV=1; Cytohesin-1 OS=Rattus norvegicus OX=10116 GN=Cyth1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"727.45111"	"1453.89495"	"1453.89398"	"0.66"	"0.00048"	"8/94"	"8"	"94"	"2724654.69104004"	"HCD"	"MS2"	"30.82108"	"127.7"	"100.000"	"62.6944"	"20000"	"20000"	"19977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.6"	""	"171.5"	""	"185.0"	""	"197.4"	""	"229.7"	"227.5"	""	"313"	"51"	"31.000"	"24.000"	"0.000124026458220194"	""	"0"	"3.369E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIPLENLSIR"	"[R].gIIPLENLSIR.[E]"	"N-Term(TMT6plex)"	"1"	"3"	"P63035"	"Cytohesin-2 OS=Rattus norvegicus OX=10116 GN=Cyth2 PE=1 SV=1"	"P97696; P63035; P97694"	"Cytohesin-3 OS=Rattus norvegicus OX=10116 GN=Cyth3 PE=2 SV=1; Cytohesin-2 OS=Rattus norvegicus OX=10116 GN=Cyth2 PE=1 SV=1; Cytohesin-1 OS=Rattus norvegicus OX=10116 GN=Cyth1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"727.45142"	"1453.89556"	"1453.89398"	"1.08"	"0.00079"	"10/94"	"10"	"94"	"3285304.33880615"	"HCD"	"MS2"	"25.22424"	"144.1"	"100.000"	"62.8243"	"20106"	"20106"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"201.4"	""	"183.4"	""	"210.2"	""	"227.0"	"0.9"	"261.0"	"281.2"	""	"311"	"42"	"31.000"	"24.000"	"0.00103688452612718"	""	"0"	"4.954E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVLVTLGEK"	"[R].hVLVTLGEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.30899"	"1453.91242"	"1453.91427"	"-1.27"	"-0.00062"	"11/70"	"11"	"70"	"30554677.223999"	"HCD"	"MS2"	"5.513937"	"469.3"	"48.168"	"36.3037"	"9260"	"9260"	"9242"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"546.1"	""	"627.9"	""	"667.2"	""	"974.4"	""	"830.0"	"801.2"	""	"235"	"45"	"30.000"	"23.000"	"0.000410239870687339"	"16"	"0"	"0.000165"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVLVTLGEK"	"[R].hVLVTLGEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"485.30948"	"1453.91388"	"1453.91427"	"-0.27"	"-0.00013"	"7/70"	"7"	"70"	"30964801.6759033"	"HCD"	"MS2"	"5.595132"	"599.8"	"56.528"	"36.3976"	"9342"	"9342"	"9321"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"681.6"	""	"810.9"	""	"848.3"	""	"1252.8"	""	"1054.6"	"1035.1"	""	"239"	"56"	"30.000"	"23.000"	"3.1071906779825E-05"	"18"	"0"	"9.641E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALLPLK"	"[K].vLEALLPLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"485.32932"	"1453.97339"	"1453.97581"	"-1.66"	"-0.00081"	"6/64"	"6"	"64"	"8777383.30718994"	"HCD"	"MS2"	"6.495111"	"210.3"	"100.000"	"75.9113"	"25440"	"25440"	"25423"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"315.2"	""	"251.1"	""	"313.2"	""	"355.0"	""	"332.4"	"425.6"	""	"31"	"33"	"21.000"	"14.000"	"0.000750467169755354"	""	"0.0003571"	"0.001494"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALLPLK"	"[K].vLEALLPLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"485.32953"	"1453.97403"	"1453.97581"	"-1.22"	"-0.00059"	"6/64"	"6"	"64"	"7801025.85284424"	"HCD"	"MS2"	"9.412227"	"188.9"	"100.000"	"75.9304"	"25395"	"25395"	"25377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.3"	""	"227.2"	""	"283.4"	""	"335.4"	""	"296.9"	"369.9"	""	"33"	"33"	"22.000"	"15.000"	"0.000804422008670588"	""	"0.0002277"	"0.001304"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALLPLK"	"[K].vLEALLPLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"485.32959"	"1453.97422"	"1453.97581"	"-1.10"	"-0.00053"	"6/64"	"6"	"64"	"8725096.67938232"	"HCD"	"MS2"	"3.799691"	"208.6"	"93.607"	"76.1973"	"25552"	"25552"	"25535"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"318.0"	""	"243.4"	""	"326.6"	""	"342.9"	""	"313.8"	"429.7"	""	"33"	"38"	"22.000"	"15.000"	"0.000260305859500392"	""	"0.0001889"	"0.0009282"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALLPLK"	"[K].vLEALLPLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"727.49084"	"1453.97441"	"1453.97581"	"-0.96"	"-0.00070"	"8/64"	"8"	"64"	"11825212.2588501"	"HCD"	"MS2"	"0.4583476"	"433.1"	"72.772"	"76.1181"	"25520"	"25520"	"25503"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"652.2"	""	"505.7"	""	"659.8"	""	"751.2"	"2.2"	"648.3"	"877.7"	""	"33"	"56"	"22.000"	"15.000"	"4.09716962373769E-06"	""	"0.0001859"	"0.0003193"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALLPLK"	"[K].vLEALLPLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"485.32971"	"1453.97458"	"1453.97581"	"-0.84"	"-0.00041"	"6/64"	"6"	"64"	"9896045.07617188"	"HCD"	"MS2"	"5.199117"	"238.7"	"95.786"	"76.2096"	"25506"	"25506"	"25489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.1"	""	"259.0"	""	"353.7"	""	"400.7"	""	"383.5"	"524.6"	""	"33"	"36"	"22.000"	"15.000"	"0.00039037675008515"	""	"0.0001889"	"0.001035"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALLPLK"	"[K].vLEALLPLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"727.49121"	"1453.97515"	"1453.97581"	"-0.46"	"-0.00033"	"14/64"	"14"	"64"	"1894125.85174561"	"HCD"	"MS2"	"14.76729"	"115.0"	"100.000"	"75.8097"	"25398"	"25398"	"25375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.9"	""	"145.7"	""	"175.7"	""	"196.8"	"0.6"	"173.2"	"218.8"	""	"31"	"50"	"21.000"	"14.000"	"1.67236741945623E-05"	""	"0.0001889"	"0.0007625"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALLPLK"	"[K].vLEALLPLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"727.49146"	"1453.97563"	"1453.97581"	"-0.12"	"-0.00009"	"14/64"	"14"	"64"	"2589312.38366699"	"HCD"	"MS2"	"0"	"149.8"	"100.000"	"75.8612"	"25367"	"25367"	"25345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.5"	""	"183.0"	""	"233.9"	""	"251.9"	""	"248.7"	"281.0"	""	"30"	"48"	"21.000"	"14.000"	"2.36641690454902E-05"	""	"0.0001308"	"0.0002777"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALLPLK"	"[K].vLEALLPLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"727.49152"	"1453.97576"	"1453.97581"	"-0.04"	"-0.00003"	"8/64"	"8"	"64"	"10667285.5639648"	"HCD"	"MS2"	"0.3416187"	"424.1"	"71.468"	"76.1700"	"25490"	"25490"	"25473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"595.4"	""	"503.0"	""	"670.0"	""	"704.4"	""	"639.0"	"907.8"	""	"30"	"58"	"21.000"	"14.000"	"2.41596845276741E-06"	""	"0.0001308"	"0.0002775"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVLESMTAFR"	"[R].tAVLESMTAFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.7966"	"0.0000"	"1"	"1"	"1"	"727.89764"	"1454.78801"	"1454.78747"	"0.37"	"0.00027"	"9/94"	"9"	"94"	"2998254.84387207"	"HCD"	"MS2"	"0"	"159.6"	"100.000"	"54.4718"	"16698"	"16698"	"16680"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"190.7"	""	"224.9"	""	"242.3"	""	"250.1"	"1.3"	"294.9"	"308.8"	""	"780"	"59"	"35.000"	"28.000"	"4.59266329673115E-05"	"28"	"0"	"2.188E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVLESMTAFR"	"[R].tAVLESMTAFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"727.89874"	"1454.79021"	"1454.78747"	"1.89"	"0.00137"	"8/94"	"8"	"94"	"3018189.66326904"	"HCD"	"MS2"	"4.785328"	"162.2"	"100.000"	"54.3115"	"16579"	"16579"	"16570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.9"	"2.1"	"229.1"	""	"244.2"	""	"273.8"	""	"293.1"	"314.3"	""	"772"	"49"	"35.000"	"28.000"	"0.000518307274999216"	"26"	"0"	"2.794E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLANPGNSQVAR"	"[R].vLANPGNSQVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.91675"	"1454.82622"	"1454.82769"	"-1.01"	"-0.00074"	"8/104"	"8"	"104"	"240797.544494629"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"30.7433"	"7037"	"7037"	"7008"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.1"	""	"26.1"	""	"26.2"	""	"21.4"	""	"22.1"	"21.8"	""	"611"	"22"	"34.000"	"27.000"	"0.209899408424348"	"14"	"0.0006037"	"0.00606"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLANPGNSQVAR"	"[R].vLANPGNSQVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"727.91766"	"1454.82805"	"1454.82769"	"0.25"	"0.00018"	"5/104"	"5"	"104"	"212961.204284668"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"30.6675"	"6965"	"6965"	"6936"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.8"	""	"19.1"	""	"18.9"	""	"19.4"	""	"22.0"	"27.6"	""	"598"	"29"	"34.000"	"27.000"	"0.0414639992832695"	"19"	"0.0001889"	"0.0009256"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQASTMAFK"	"[K].iQASTMAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"485.61884"	"1454.84195"	"1454.84414"	"-1.50"	"-0.00073"	"7/80"	"7"	"80"	"7604019.80291748"	"HCD"	"MS2"	"28.72278"	"266.8"	"100.000"	"42.7355"	"11892"	"11892"	"11868"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.5"	""	"257.0"	""	"265.8"	""	"347.0"	""	"605.9"	"714.2"	""	"555"	"39"	"34.000"	"27.000"	"0.00370052197425323"	"18"	"0.0001308"	"0.0002605"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQASTMAFK"	"[K].iQASTMAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"485.61905"	"1454.84259"	"1454.84414"	"-1.06"	"-0.00052"	"7/80"	"7"	"80"	"8972732.17266846"	"HCD"	"MS2"	"9.538073"	"291.4"	"95.033"	"43.0009"	"12045"	"12045"	"12019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"392.7"	""	"296.3"	""	"274.5"	""	"354.2"	""	"672.6"	"791.0"	""	"559"	"40"	"34.000"	"27.000"	"0.002795"	"19"	"0.0001889"	"0.0005054"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQASTMAFK"	"[K].iQASTMAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"727.92560"	"1454.84392"	"1454.84414"	"-0.15"	"-0.00011"	"7/80"	"7"	"80"	"12116392.987915"	"HCD"	"MS2"	"4.10322"	"930.9"	"100.000"	"42.9574"	"12027"	"12027"	"12003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1234.7"	""	"801.0"	""	"663.8"	""	"1152.3"	"12.7"	"2240.2"	"2775.5"	""	"554"	"49"	"34.000"	"27.000"	"0.000344730547460674"	"23"	"0.0001308"	"0.0003022"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQASTMAFK"	"[K].iQASTMAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"727.92578"	"1454.84429"	"1454.84414"	"0.10"	"0.00007"	"7/80"	"7"	"80"	"11935176.7681885"	"HCD"	"MS2"	"3.378009"	"774.1"	"78.599"	"42.6920"	"11874"	"11874"	"11852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1012.8"	""	"662.0"	""	"565.4"	""	"910.9"	""	"1864.3"	"2372.3"	""	"572"	"52"	"34.000"	"27.000"	"0.000171935688920217"	"24"	"0.0001308"	"0.0002817"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITINDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"727.92987"	"1454.85246"	"1454.85284"	"-0.26"	"-0.00019"	"8/106"	"8"	"106"	"1435798.06988525"	"HCD"	"MS2"	"0"	"104.6"	"100.000"	"47.9746"	"14019"	"14019"	"13992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.3"	""	"145.6"	""	"152.1"	""	"155.0"	""	"187.1"	"199.2"	""	"536"	"44"	"34.000"	"27.000"	"0.00113275188623182"	"23"	"0"	"9.91E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"727.92987"	"1454.85246"	"1454.85284"	"-0.26"	"-0.00019"	"8/106"	"8"	"106"	"1435798.06988525"	"HCD"	"MS2"	"0"	"104.6"	"100.000"	"47.9746"	"14019"	"14019"	"13992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.3"	""	"145.6"	""	"152.1"	""	"155.0"	""	"187.1"	"199.2"	""	"536"	"44"	"34.000"	"27.000"	"0.00113275188623182"	"23"	"0"	"9.91E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITINDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"727.92999"	"1454.85271"	"1454.85284"	"-0.09"	"-0.00007"	"10/106"	"10"	"106"	"1319762.11224365"	"HCD"	"MS2"	"0"	"98.6"	"100.000"	"48.2633"	"14185"	"14185"	"14159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.8"	""	"137.1"	""	"140.7"	""	"156.9"	"1.6"	"183.1"	"174.9"	""	"536"	"31"	"34.000"	"27.000"	"0.0232881395048729"	"20"	"0"	"0.000133"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"727.92999"	"1454.85271"	"1454.85284"	"-0.09"	"-0.00007"	"10/106"	"10"	"106"	"1319762.11224365"	"HCD"	"MS2"	"0"	"98.6"	"100.000"	"48.2633"	"14185"	"14185"	"14159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.8"	""	"137.1"	""	"140.7"	""	"156.9"	"1.6"	"183.1"	"174.9"	""	"536"	"31"	"34.000"	"27.000"	"0.0232881395048729"	"20"	"0"	"0.000133"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITINDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"727.93182"	"1454.85637"	"1454.85284"	"2.42"	"0.00176"	"9/106"	"9"	"106"	"1077979.15380859"	"HCD"	"MS2"	"0"	"84.9"	"100.000"	"48.5707"	"14310"	"14310"	"14287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.4"	""	"106.2"	""	"121.8"	""	"129.2"	"6.0"	"146.6"	"162.1"	""	"533"	"32"	"34.000"	"27.000"	"0.0155846557424504"	"16"	"0"	"0.0001451"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"727.93182"	"1454.85637"	"1454.85284"	"2.42"	"0.00176"	"9/106"	"9"	"106"	"1077979.15380859"	"HCD"	"MS2"	"0"	"84.9"	"100.000"	"48.5707"	"14310"	"14310"	"14287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.4"	""	"106.2"	""	"121.8"	""	"129.2"	"6.0"	"146.6"	"162.1"	""	"533"	"32"	"34.000"	"27.000"	"0.0155846557424504"	"16"	"0"	"0.0001451"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIFPLFMK"	"[R].tIFPLFMk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"3"	"727.94568"	"1454.88408"	"1454.88455"	"-0.32"	"-0.00023"	"9/56"	"9"	"56"	"1195956.97271729"	"HCD"	"MS2"	"27.06661"	"83.9"	"100.000"	"75.8011"	"25343"	"25343"	"25313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.4"	""	"114.8"	""	"130.6"	""	"120.1"	""	"135.4"	"167.3"	""	"389"	"5"	"32.000"	"25.000"	"5.996800563235"	"14"	"0.00274"	"0.04381"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGWFPSNYVR"	"[R].tGWFPSNYVR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"Q5XXR3; O55043"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1; Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.38293"	"1455.75859"	"1455.75822"	"0.26"	"0.00019"	"8/88"	"8"	"88"	"7540522.38153076"	"HCD"	"MS2"	"33.15889"	"447.1"	"100.000"	"49.4686"	"14630"	"14630"	"14607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"593.5"	""	"580.2"	""	"559.4"	""	"729.5"	""	"901.1"	"879.6"	""	"736"	"19"	"35.000"	"28.000"	"0.433358998255657"	"14"	"0.0001308"	"0.0003074"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGWFPSNYVR"	"[R].tGWFPSNYVR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"Q5XXR3; O55043"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1; Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.38336"	"1455.75945"	"1455.75822"	"0.85"	"0.00062"	"7/88"	"7"	"88"	"8762273.47271729"	"HCD"	"MS2"	"29.51167"	"546.2"	"100.000"	"49.7507"	"14788"	"14788"	"14766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"685.9"	""	"684.3"	""	"744.3"	""	"933.1"	""	"1076.5"	"1063.2"	""	"733"	"15"	"35.000"	"28.000"	"1.29143924237072"	"13"	"0.0001889"	"0.0003922"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWGVASFLQR"	"[K].yWGVASFLQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04916"	"Retinol-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Rbp4 PE=1 SV=1"	"P04916"	"Retinol-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Rbp4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.40118"	"1455.79509"	"1455.79460"	"0.34"	"0.00025"	"8/74"	"8"	"74"	"2121238.35705566"	"HCD"	"MS2"	"29.55318"	"104.4"	"100.000"	"65.9753"	"21340"	"21340"	"21321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.1"	""	"173.0"	""	"167.1"	""	"175.8"	""	"168.5"	"166.4"	""	"738"	"30"	"35.000"	"28.000"	"0.0350773168859168"	"14"	"0"	"6.064E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWGVASFLQR"	"[K].yWGVASFLQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04916"	"Retinol-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Rbp4 PE=1 SV=1"	"P04916"	"Retinol-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Rbp4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.40149"	"1455.79570"	"1455.79460"	"0.76"	"0.00055"	"8/74"	"8"	"74"	"2772346.0255127"	"HCD"	"MS2"	"26.94852"	"135.0"	"100.000"	"65.8637"	"21348"	"21348"	"21331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.6"	""	"243.4"	""	"213.2"	""	"214.9"	""	"194.8"	"215.2"	""	"744"	"41"	"35.000"	"28.000"	"0.0029143582710903"	"15"	"0"	"6.615E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSYNTASNK"	"[R].lSYNTASNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.41449"	"1455.82170"	"1455.82076"	"0.64"	"0.00047"	"8/84"	"8"	"84"	"549309.218566895"	"HCD"	"MS2"	"100"	"56.1"	"100.000"	"32.1808"	"7625"	"7625"	"7594"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.3"	""	"85.8"	""	"83.8"	""	"85.2"	""	"90.7"	"84.9"	""	"719"	"39"	"35.000"	"28.000"	"0.00444323102323302"	"15"	"0"	"6.178E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSYNTASNK"	"[R].lSYNTASNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.41455"	"1455.82182"	"1455.82076"	"0.73"	"0.00053"	"8/84"	"8"	"84"	"646751.762939453"	"HCD"	"MS2"	"0"	"62.9"	"100.000"	"32.0623"	"7534"	"7534"	"7506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.9"	""	"98.6"	""	"85.5"	""	"91.8"	""	"107.7"	"96.4"	""	"719"	"39"	"35.000"	"28.000"	"0.00427266550763608"	"15"	"0"	"5.243E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSEMLQK"	"[R].fVSEmLQk.[N]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.41772"	"1455.82817"	"1455.82816"	"0.01"	"0.00001"	"7/60"	"7"	"60"	"3698292.4609375"	"HCD"	"MS2"	"0"	"260.0"	"100.000"	"40.0530"	"10841"	"10841"	"10813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"382.5"	""	"342.7"	""	"357.7"	""	"466.0"	""	"456.9"	"458.2"	""	"736"	"22"	"35.000"	"28.000"	"0.244820521482241"	"14"	"0.003635"	"0.08346"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSEMLQK"	"[R].fVSEmLQk.[N]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.41846"	"1455.82964"	"1455.82816"	"1.02"	"0.00074"	"7/60"	"7"	"60"	"3664060.21966553"	"HCD"	"MS2"	"0"	"259.0"	"100.000"	"39.9438"	"10752"	"10752"	"10725"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.7"	""	"343.1"	""	"364.4"	""	"437.9"	"3.5"	"461.5"	"439.6"	""	"694"	"23"	"35.000"	"28.000"	"0.168395109556256"	"14"	"0.002297"	"0.03405"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDGMVGLIIGR"	"[R].vPDGMVGLIIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"3"	"3"	"0.4118"	"0.0000"	"1"	"1"	"1"	"485.95624"	"1455.85416"	"1455.85549"	"-0.91"	"-0.00044"	"4/88"	"4"	"88"	"580168.50970459"	"HCD"	"MS2"	"68.93507"	"17.4"	"100.000"	"69.2674"	"22728"	"22728"	"22698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.7"	""	"21.2"	""	"31.6"	""	"23.8"	""	"30.3"	"42.7"	""	"666"	"17"	"35.000"	"28.000"	"0.614390134586764"	"24"	"0.0003146"	"0.001468"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDGMVGLIIGR"	"[R].vPDGMVGLIIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"728.43109"	"1455.85491"	"1455.85549"	"-0.40"	"-0.00029"	"11/88"	"11"	"88"	"1909188.34197998"	"HCD"	"MS2"	"18.09451"	"66.0"	"100.000"	"69.0097"	"22622"	"22622"	"22602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.4"	""	"74.5"	""	"92.3"	""	"85.4"	""	"129.2"	"137.5"	""	"663"	"47"	"35.000"	"28.000"	"0.000600459240703398"	"21"	"0"	"2.372E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDGMVGLIIGR"	"[R].vPDGMVGLIIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"728.43164"	"1455.85600"	"1455.85549"	"0.36"	"0.00026"	"11/88"	"11"	"88"	"2210576.35583496"	"HCD"	"MS2"	"15.81863"	"75.4"	"100.000"	"69.1793"	"22640"	"22640"	"22618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.0"	""	"90.6"	""	"98.6"	""	"95.1"	"2.2"	"152.3"	"164.5"	""	"691"	"46"	"35.000"	"28.000"	"0.000925652656224976"	"20"	"0"	"0.0001541"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASLMTYK"	"[K].aLASLMTYk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7719"	"0.0000"	"1"	"1"	"1"	"728.43616"	"1455.86504"	"1455.86454"	"0.34"	"0.00025"	"8/70"	"8"	"70"	"8797341.80596924"	"HCD"	"MS2"	"2.411706"	"524.4"	"75.553"	"57.0708"	"17708"	"17708"	"17691"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"772.1"	""	"783.3"	""	"879.8"	""	"555.4"	"2.7"	"953.7"	"1019.5"	""	"604"	"57"	"34.000"	"27.000"	"6.56155756016851E-05"	""	"0.0001308"	"0.000294"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASLMTYK"	"[K].aLASLMTYk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"728.43634"	"1455.86540"	"1455.86454"	"0.59"	"0.00043"	"13/70"	"13"	"70"	"5332801.17797852"	"HCD"	"MS2"	"28.66904"	"408.4"	"100.000"	"56.9888"	"17728"	"17728"	"17701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"564.7"	""	"652.4"	""	"634.9"	""	"504.6"	""	"766.4"	"756.4"	""	"597"	"40"	"34.000"	"27.000"	"0.00280507408203544"	"25"	"0.0001308"	"0.0002599"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASLMTYK"	"[K].aLASLMTYk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7627"	"0.0000"	"1"	"1"	"1"	"728.43634"	"1455.86540"	"1455.86454"	"0.59"	"0.00043"	"8/70"	"8"	"70"	"8220138.3125"	"HCD"	"MS2"	"4.734473"	"618.4"	"100.000"	"57.2770"	"17846"	"17846"	"17829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"928.2"	""	"943.7"	""	"986.2"	""	"676.2"	"0.2"	"1151.3"	"1171.3"	""	"597"	"59"	"34.000"	"27.000"	"4.06391237716086E-05"	""	"0"	"0.0001771"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASLMTYK"	"[K].aLASLMTYk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"728.43677"	"1455.86626"	"1455.86454"	"1.18"	"0.00086"	"8/70"	"8"	"70"	"5089963.12426758"	"HCD"	"MS2"	"30.45193"	"395.0"	"100.000"	"56.7837"	"17590"	"17590"	"17563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"601.4"	""	"625.2"	""	"629.7"	""	"448.2"	"4.6"	"704.8"	"725.5"	""	"550"	"55"	"34.000"	"27.000"	"9.42611413002739E-05"	"24"	"0.0001308"	"0.0002314"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLYNLFTK"	"[R].vLYNLFTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"728.45135"	"1455.89543"	"1455.89756"	"-1.46"	"-0.00106"	"6/64"	"6"	"64"	"2361551.13867188"	"HCD"	"MS2"	"0"	"185.7"	"100.000"	"67.0931"	"21796"	"21796"	"21781"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.2"	""	"231.9"	""	"293.5"	""	"330.6"	"0.3"	"306.6"	"348.1"	""	"356"	"47"	"32.000"	"25.000"	"0.000353524895289612"	""	"0.0001889"	"0.000571"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLYNLFTK"	"[R].vLYNLFTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"728.45184"	"1455.89641"	"1455.89756"	"-0.79"	"-0.00057"	"7/64"	"7"	"64"	"924738.551269531"	"HCD"	"MS2"	"0"	"72.6"	"100.000"	"67.4248"	"21976"	"21976"	"21949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.4"	""	"94.3"	""	"108.7"	""	"125.4"	""	"108.9"	"145.1"	""	"363"	"41"	"32.000"	"25.000"	"0.00138955784154393"	"20"	"0.0001308"	"0.0002241"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLYNLFTK"	"[R].vLYNLFTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"728.45209"	"1455.89690"	"1455.89756"	"-0.45"	"-0.00033"	"6/64"	"6"	"64"	"2017025.24383545"	"HCD"	"MS2"	"0"	"155.1"	"100.000"	"67.0941"	"21845"	"21845"	"21833"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.7"	""	"199.0"	""	"245.9"	""	"276.0"	"3.0"	"248.1"	"301.3"	""	"360"	"44"	"32.000"	"25.000"	"0.000736669187514019"	"20"	"0.0001308"	"0.0002963"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLYNLFTK"	"[R].vLYNLFTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"728.45276"	"1455.89824"	"1455.89756"	"0.47"	"0.00034"	"14/64"	"14"	"64"	"949863.339416504"	"HCD"	"MS2"	"0"	"84.0"	"100.000"	"67.4460"	"21934"	"21934"	"21918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.8"	""	"109.4"	"2.6"	"129.1"	""	"136.6"	"2.7"	"137.8"	"159.6"	""	"337"	"47"	"32.000"	"25.000"	"0.000348016556254074"	"21"	"0.0001308"	"0.000311"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLPELGIK"	"[K].eVLPELGIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"485.97717"	"1455.91697"	"1455.91869"	"-1.18"	"-0.00057"	"7/72"	"7"	"72"	"5147246.8348999"	"HCD"	"MS2"	"9.295458"	"167.1"	"100.000"	"56.1148"	"17317"	"17317"	"17291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.0"	""	"282.0"	""	"259.4"	""	"245.2"	""	"256.9"	"279.2"	""	"250"	"46"	"30.000"	"23.000"	"0.000282429471277622"	"23"	"0"	"0.0001469"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLPELGIK"	"[K].eVLPELGIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"728.46240"	"1455.91753"	"1455.91869"	"-0.80"	"-0.00058"	"13/72"	"13"	"72"	"3190319.78967285"	"HCD"	"MS2"	"6.945083"	"220.8"	"100.000"	"56.3271"	"17404"	"17404"	"17387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"339.9"	""	"360.5"	""	"332.5"	""	"324.6"	"3.1"	"356.5"	"370.7"	""	"250"	"42"	"30.000"	"23.000"	"0.000746294108229795"	"23"	"0.0001308"	"0.0002518"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLPELGIK"	"[K].eVLPELGIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"485.97751"	"1455.91797"	"1455.91869"	"-0.49"	"-0.00024"	"7/72"	"7"	"72"	"4587273.49615479"	"HCD"	"MS2"	"32.64255"	"149.3"	"100.000"	"56.2859"	"17441"	"17441"	"17413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.8"	""	"254.6"	""	"227.9"	""	"217.9"	""	"239.7"	"233.9"	""	"248"	"46"	"30.000"	"23.000"	"0.000280815894141539"	"23"	"0"	"0.0001371"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLPELGIK"	"[K].eVLPELGIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"728.46283"	"1455.91838"	"1455.91869"	"-0.21"	"-0.00015"	"13/72"	"13"	"72"	"3160588.14141846"	"HCD"	"MS2"	"7.319818"	"204.4"	"100.000"	"56.5325"	"17542"	"17542"	"17525"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"294.9"	""	"346.2"	""	"308.8"	""	"285.1"	"0.5"	"339.3"	"358.6"	""	"247"	"42"	"30.000"	"23.000"	"0.000770312521820789"	"23"	"0"	"0.0001578"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLPELGIK"	"[K].eVLPELGIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"728.46307"	"1455.91887"	"1455.91869"	"0.13"	"0.00009"	"14/72"	"14"	"72"	"3888398.8067627"	"HCD"	"MS2"	"29.20986"	"252.0"	"100.000"	"56.0273"	"17281"	"17281"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"397.6"	""	"436.2"	""	"392.2"	""	"361.2"	""	"403.8"	"391.0"	""	"242"	"49"	"30.000"	"23.000"	"0.000150586268024338"	"23"	"0"	"0.0001206"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLPELGIK"	"[K].eVLPELGIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"728.46362"	"1455.91997"	"1455.91869"	"0.88"	"0.00064"	"14/72"	"14"	"72"	"4342313.83868408"	"HCD"	"MS2"	"15.45952"	"281.4"	"100.000"	"56.2375"	"17421"	"17421"	"17397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"431.5"	""	"488.0"	""	"431.5"	""	"414.4"	""	"460.0"	"434.1"	""	"243"	"46"	"30.000"	"23.000"	"0.000312303087606417"	"23"	"0"	"0.00016"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPTPPTK"	"[K].kPTPPTk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.97919"	"1455.92301"	"1455.95021"	"-18.68"	"-0.00907"	"4/66"	"4"	"66"	"3073222.27374268"	"HCD"	"MS2"	"44.85"	"249.7"	"100.000"	"27.5506"	"5732"	"5732"	"5708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.5"	""	"326.9"	""	"359.6"	""	"404.4"	""	"473.1"	"454.6"	""	"229"	"13"	"30.000"	"23.000"	"0.607862688644481"	"13"	"0.009642"	"0.4366"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVYNSWMK"	"[K].aVYNSWMk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.90472"	"1456.80217"	"1456.80228"	"-0.07"	"-0.00005"	"14/64"	"14"	"64"	"2631952.20819092"	"HCD"	"MS2"	"0"	"258.5"	"100.000"	"44.4472"	"12631"	"12631"	"12604"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"505.9"	""	"438.3"	""	"410.0"	""	"226.4"	"3.0"	"437.5"	"420.9"	""	"715"	"44"	"35.000"	"28.000"	"0.00155337405141337"	"15"	"0.0001859"	"0.0003683"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVYNSWMK"	"[K].aVYNSWMk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.90533"	"1456.80339"	"1456.80228"	"0.77"	"0.00056"	"14/64"	"14"	"64"	"2541563.31829834"	"HCD"	"MS2"	"16.30396"	"255.6"	"100.000"	"44.1971"	"12479"	"12479"	"12454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"534.8"	""	"436.4"	""	"410.9"	""	"213.6"	"0.6"	"403.0"	"413.8"	""	"752"	"40"	"35.000"	"28.000"	"0.00372552811279681"	"15"	"0.0001889"	"0.0005576"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFIPYMAK"	"[K].eFIPYMAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.90851"	"1456.80974"	"1456.82743"	"-12.14"	"-0.00884"	"4/56"	"4"	"56"	"748085.705200195"	"HCD"	"MS2"	"0"	"78.1"	"100.000"	"54.1212"	"16556"	"16556"	"16541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.0"	""	"124.3"	""	"101.2"	""	"117.8"	"0.9"	"136.5"	"127.1"	""	"741"	"14"	"35.000"	"28.000"	"1.58412049319163"	"13"	"0.003107"	"0.05887"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFIPYMAK"	"[K].eFIPYMAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"728.90869"	"1456.81011"	"1456.82743"	"-11.89"	"-0.00866"	"6/56"	"6"	"56"	"866798.381835938"	"HCD"	"MS2"	"0"	"91.4"	"100.000"	"53.9675"	"16439"	"16439"	"16425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.5"	""	"130.1"	""	"132.6"	""	"143.7"	""	"170.1"	"140.6"	""	"741"	"20"	"35.000"	"28.000"	"0.413797833302698"	"15"	"0.0004557"	"0.002555"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLFDFQK"	"[K].nSLFDFQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"728.90875"	"1456.81023"	"1456.82004"	"-6.73"	"-0.00490"	"14/76"	"14"	"76"	"1859875.60620117"	"HCD"	"MS2"	"0"	"189.3"	"100.000"	"53.2623"	"16221"	"16221"	"16210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.2"	""	"229.5"	""	"202.7"	""	"379.2"	""	"407.8"	"335.4"	""	"741"	"41"	"35.000"	"28.000"	"0.0031534664315398"	"24"	"0.0001889"	"0.0005552"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"486.27496"	"1456.81034"	"1456.81217"	"-1.26"	"-0.00061"	"6/62"	"6"	"62"	"7255260.0871582"	"HCD"	"MS2"	"9.671073"	"270.1"	"100.000"	"60.1520"	"19015"	"19015"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"395.8"	""	"395.6"	""	"380.2"	""	"290.6"	""	"515.2"	"593.8"	""	"741"	"25"	"35.000"	"28.000"	"0.114495445774629"	"22"	"0.0003839"	"0.001574"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLFDFQK"	"[K].nSLFDFQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"728.90900"	"1456.81072"	"1456.82004"	"-6.40"	"-0.00466"	"8/76"	"8"	"76"	"494395.489013672"	"HCD"	"MS2"	"0"	"57.4"	"100.000"	"53.3858"	"16212"	"16212"	"16204"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.5"	""	"80.1"	""	"73.4"	""	"103.8"	""	"107.1"	"100.1"	""	"747"	"9"	"35.000"	"28.000"	"4.2392653965361"	"17"	"0.00109"	"0.01479"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"486.27512"	"1456.81079"	"1456.81217"	"-0.95"	"-0.00046"	"6/62"	"6"	"62"	"14446755.3921509"	"HCD"	"MS2"	"38.69523"	"496.1"	"100.000"	"59.5377"	"18764"	"18764"	"18741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"763.2"	""	"745.3"	""	"722.8"	""	"591.4"	""	"916.3"	"965.4"	""	"747"	"33"	"35.000"	"28.000"	"0.0201043763769834"	"22"	"0.0002277"	"0.001251"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"728.90918"	"1456.81108"	"1456.81217"	"-0.75"	"-0.00055"	"6/62"	"6"	"62"	"12689547.0765381"	"HCD"	"MS2"	"2.465537"	"604.6"	"55.911"	"60.2254"	"19045"	"19045"	"19027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"900.0"	""	"878.6"	""	"824.3"	""	"647.4"	"1.7"	"1158.3"	"1324.6"	""	"745"	"43"	"35.000"	"28.000"	"0.00195041162628192"	"22"	"0.0003146"	"0.001448"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFIPYMAK"	"[K].eFIPYMAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"728.90924"	"1456.81120"	"1456.82743"	"-11.14"	"-0.00811"	"7/56"	"7"	"56"	"435741.706726074"	"HCD"	"MS2"	"0"	"54.2"	"100.000"	"53.6723"	"16322"	"16322"	"16307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.7"	""	"71.5"	""	"66.7"	""	"100.9"	"0.1"	"99.2"	"94.8"	""	"738"	"4"	"35.000"	"28.000"	"14.7579612661845"	"13"	"0.008371"	"0.3527"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.27527"	"1456.81125"	"1456.81217"	"-0.63"	"-0.00031"	"6/62"	"6"	"62"	"12639357.3675537"	"HCD"	"MS2"	"14.19977"	"486.6"	"100.000"	"59.3976"	"18653"	"18653"	"18633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"698.9"	""	"729.3"	""	"725.8"	""	"579.8"	""	"911.6"	"973.1"	""	"738"	"25"	"35.000"	"28.000"	"0.108649158287174"	"14"	"0.000523"	"0.003057"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"728.90930"	"1456.81133"	"1456.81217"	"-0.58"	"-0.00042"	"6/62"	"6"	"62"	"1422008.19366455"	"HCD"	"MS2"	"15.45434"	"116.7"	"100.000"	"62.1141"	"19816"	"19816"	"19795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.2"	""	"114.1"	""	"142.9"	""	"138.4"	"0.4"	"386.4"	"228.1"	""	"738"	"38"	"35.000"	"28.000"	"0.00618053921253756"	"16"	"0.0001308"	"0.0003005"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"728.90936"	"1456.81145"	"1456.81217"	"-0.50"	"-0.00036"	"14/62"	"14"	"62"	"1877379.16278076"	"HCD"	"MS2"	"15.43815"	"177.3"	"100.000"	"60.9061"	"19323"	"19323"	"19299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"271.5"	""	"231.7"	""	"259.4"	""	"213.4"	"0.2"	"335.8"	"368.9"	""	"738"	"40"	"35.000"	"28.000"	"0.00342788596721796"	"18"	"0.0001308"	"0.0002763"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.27539"	"1456.81162"	"1456.81217"	"-0.38"	"-0.00018"	"6/62"	"6"	"62"	"6052330.68023682"	"HCD"	"MS2"	"10.71465"	"237.9"	"100.000"	"60.0206"	"18908"	"18908"	"18889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"364.7"	""	"365.3"	""	"323.1"	""	"277.2"	""	"426.7"	"504.4"	""	"738"	"26"	"35.000"	"28.000"	"0.101164086944139"	"14"	"0.0003839"	"0.001828"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"728.90948"	"1456.81169"	"1456.81217"	"-0.33"	"-0.00024"	"14/62"	"14"	"62"	"4085070.24310303"	"HCD"	"MS2"	"0"	"342.7"	"100.000"	"60.3320"	"19035"	"19035"	"19017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"505.0"	""	"529.7"	""	"471.5"	""	"373.3"	""	"655.5"	"714.4"	""	"738"	"43"	"35.000"	"28.000"	"0.00207026703155982"	"20"	"0.0001889"	"0.000579"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"728.90955"	"1456.81182"	"1456.81217"	"-0.25"	"-0.00018"	"14/62"	"14"	"62"	"1911043.86358643"	"HCD"	"MS2"	"12.96906"	"175.0"	"100.000"	"60.7654"	"19212"	"19212"	"19193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"268.1"	""	"252.2"	""	"252.0"	""	"203.3"	""	"335.7"	"351.5"	""	"738"	"42"	"35.000"	"28.000"	"0.00215787541049313"	"19"	"0.0001889"	"0.0003926"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"486.27548"	"1456.81189"	"1456.81217"	"-0.19"	"-0.00009"	"6/62"	"6"	"62"	"89655243.4287109"	"HCD"	"MS2"	"5.045438"	"444.2"	"13.782"	"59.7055"	"18779"	"18779"	"18761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"675.2"	""	"609.4"	""	"672.8"	""	"451.5"	""	"848.1"	"958.5"	""	"739"	"34"	"35.000"	"28.000"	"0.0141128408075397"	"23"	"0.0006037"	"0.004037"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"728.90979"	"1456.81230"	"1456.81217"	"0.09"	"0.00006"	"14/62"	"14"	"62"	"3394395.83496094"	"HCD"	"MS2"	"0"	"272.7"	"100.000"	"60.5441"	"19175"	"19175"	"19155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"402.1"	""	"404.1"	""	"378.0"	""	"313.6"	""	"516.7"	"575.7"	""	"738"	"41"	"35.000"	"28.000"	"0.00318439084126012"	"18"	"0.0001889"	"0.0005668"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"728.90979"	"1456.81230"	"1456.81217"	"0.09"	"0.00006"	"6/62"	"6"	"62"	"21563237.2186279"	"HCD"	"MS2"	"2.319039"	"557.0"	"29.278"	"60.0139"	"18906"	"18906"	"18889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"832.0"	""	"798.3"	""	"798.1"	""	"573.2"	"0.4"	"1063.0"	"1217.5"	""	"738"	"43"	"35.000"	"28.000"	"0.00188810597314374"	"20"	"0.0002277"	"0.001138"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"486.27563"	"1456.81235"	"1456.81217"	"0.12"	"0.00006"	"6/62"	"6"	"62"	"110127484.82373"	"HCD"	"MS2"	"4.517064"	"496.3"	"12.839"	"59.8321"	"18885"	"18885"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"729.9"	""	"718.4"	""	"748.9"	""	"492.0"	""	"961.5"	"1062.5"	""	"738"	"35"	"35.000"	"28.000"	"0.010889962046399"	"24"	"0.0006037"	"0.005027"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"728.90985"	"1456.81243"	"1456.81217"	"0.17"	"0.00013"	"6/62"	"6"	"62"	"36152599.0574951"	"HCD"	"MS2"	"40.9407"	"1286.7"	"50.905"	"59.5216"	"18758"	"18758"	"18741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1955.7"	""	"1917.5"	""	"1847.0"	""	"1646.3"	"13.3"	"2324.8"	"2483.2"	""	"738"	"39"	"35.000"	"28.000"	"0.00440581610547317"	"17"	"0.0003839"	"0.001759"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLFDFQK"	"[K].nSLFDFQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"728.91034"	"1456.81340"	"1456.82004"	"-4.55"	"-0.00332"	"11/76"	"11"	"76"	"488478.078063965"	"HCD"	"MS2"	"0"	"59.6"	"100.000"	"53.5464"	"16331"	"16331"	"16326"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.8"	""	"80.6"	""	"71.4"	""	"113.0"	""	"115.5"	"101.9"	""	"739"	"17"	"35.000"	"28.000"	"0.68962729576341"	"20"	"0.0003146"	"0.001396"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLFDFQK"	"[K].nSLFDFQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"728.91040"	"1456.81352"	"1456.82004"	"-4.47"	"-0.00326"	"7/76"	"7"	"76"	"1409205.93841553"	"HCD"	"MS2"	"0"	"149.2"	"100.000"	"53.0984"	"16104"	"16104"	"16090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.3"	""	"187.9"	""	"158.3"	""	"288.3"	"1.4"	"314.8"	"273.3"	""	"739"	"23"	"35.000"	"28.000"	"0.178079711222484"	"22"	"0.0001889"	"0.0006525"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"728.91040"	"1456.81352"	"1456.81217"	"0.93"	"0.00068"	"6/62"	"6"	"62"	"49560887.3260498"	"HCD"	"MS2"	"30.83236"	"1242.6"	"34.362"	"59.3925"	"18651"	"18651"	"18633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1950.0"	""	"1796.2"	""	"1771.9"	""	"1507.5"	"5.7"	"2259.4"	"2481.1"	""	"739"	"42"	"35.000"	"28.000"	"0.00209225417299635"	"19"	"0.0004166"	"0.00213"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLFDFQK"	"[K].nSLFDFQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"728.91046"	"1456.81365"	"1456.82004"	"-4.39"	"-0.00319"	"7/76"	"7"	"76"	"425487.415161133"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"53.8119"	"16432"	"16432"	"16425"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.1"	""	"78.4"	""	"55.5"	""	"89.7"	"0.2"	"104.4"	"80.8"	""	"721"	"1"	"35.000"	"28.000"	"25.698351736061"	"13"	"0.004346"	"0.1236"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"728.91077"	"1456.81426"	"1456.81217"	"1.43"	"0.00104"	"14/62"	"14"	"62"	"273489107.996094"	"HCD"	"MS2"	"0"	"562.0"	"2.540"	"59.9103"	"18917"	"18917"	"18900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"856.1"	""	"806.7"	""	"825.3"	""	"538.7"	""	"1061.3"	"1241.4"	""	"748"	"41"	"35.000"	"28.000"	"0.00276612372871781"	"18"	"0.001422"	"0.01942"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLMk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"728.91162"	"1456.81597"	"1456.81217"	"2.60"	"0.00190"	"14/62"	"14"	"62"	"495517507.910156"	"HCD"	"MS2"	"0"	"751.5"	"1.872"	"59.7011"	"18778"	"18778"	"18761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1163.4"	""	"1077.5"	""	"1106.3"	""	"739.0"	"6.1"	"1410.4"	"1621.2"	""	"713"	"43"	"35.000"	"28.000"	"0.00179911752581398"	"19"	"0.002829"	"0.04628"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLFDFQK"	"[K].nSLFDFQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"486.27774"	"1456.81867"	"1456.82004"	"-0.94"	"-0.00046"	"11/76"	"11"	"76"	"19171827.6498413"	"HCD"	"MS2"	"21.5993"	"560.0"	"100.000"	"52.9937"	"16112"	"16112"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"640.3"	""	"646.7"	""	"508.8"	""	"1271.7"	"3.3"	"1240.4"	"1009.6"	""	"726"	"24"	"35.000"	"28.000"	"0.155205327673026"	"18"	"0.0006037"	"0.00449"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLFDFQK"	"[K].nSLFDFQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"728.91351"	"1456.81975"	"1456.82004"	"-0.20"	"-0.00014"	"14/76"	"14"	"76"	"21034790.0666504"	"HCD"	"MS2"	"0"	"1718.2"	"100.000"	"52.9774"	"16105"	"16105"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2071.2"	""	"1895.8"	""	"1503.5"	""	"3968.8"	""	"3828.5"	"3074.9"	""	"748"	"40"	"35.000"	"28.000"	"0.00340307563964462"	"24"	"0.0002277"	"0.001277"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLFDFQK"	"[K].nSLFDFQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"728.91357"	"1456.81987"	"1456.82004"	"-0.11"	"-0.00008"	"14/76"	"14"	"76"	"17071634.6942749"	"HCD"	"MS2"	"0"	"1513.3"	"100.000"	"52.7795"	"15974"	"15974"	"15954"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1812.4"	""	"1716.2"	""	"1306.6"	""	"3551.1"	""	"3302.0"	"2696.7"	""	"739"	"40"	"35.000"	"28.000"	"0.00347227763253633"	"23"	"0.0002277"	"0.001151"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLFDFQK"	"[K].nSLFDFQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"486.27820"	"1456.82004"	"1456.82004"	"0.00"	"0.00000"	"9/76"	"9"	"76"	"19254753.1682739"	"HCD"	"MS2"	"6.124165"	"610.1"	"100.000"	"52.8231"	"15992"	"15992"	"15970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"712.5"	""	"677.6"	""	"577.9"	""	"1339.6"	"2.0"	"1361.2"	"1126.5"	""	"738"	"23"	"35.000"	"28.000"	"0.169054356197663"	"19"	"0.0006037"	"0.005563"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGVDNPAAK"	"[K].nIGVDNPAAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"728.92950"	"1456.85173"	"1456.85240"	"-0.46"	"-0.00033"	"7/90"	"7"	"90"	"356411.342529297"	"HCD"	"MS2"	"0"	"31.3"	"100.000"	"34.3958"	"8521"	"8521"	"8492"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.7"	""	"39.9"	""	"48.6"	""	"52.7"	""	"56.3"	"53.7"	""	"682"	"42"	"35.000"	"28.000"	"0.00211716340672451"	"21"	"0.0001889"	"0.0003794"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"728.93329"	"1456.85930"	"1456.85979"	"-0.34"	"-0.00025"	"16/72"	"16"	"72"	"4842250.40545654"	"HCD"	"MS2"	"0"	"304.1"	"100.000"	"37.4089"	"9714"	"9714"	"9688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"590.4"	""	"635.0"	""	"392.2"	""	"372.4"	""	"434.4"	"447.0"	""	"636"	"65"	"35.000"	"28.000"	"1.07752441652266E-05"	"23"	"0"	"5.109E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"728.93335"	"1456.85942"	"1456.85979"	"-0.25"	"-0.00018"	"15/72"	"15"	"72"	"4430330.40228271"	"HCD"	"MS2"	"0"	"285.9"	"100.000"	"37.5250"	"9805"	"9805"	"9777"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"552.5"	""	"604.6"	""	"369.5"	""	"341.4"	""	"423.7"	"408.0"	""	"636"	"59"	"35.000"	"28.000"	"4.21140608191904E-05"	"23"	"0"	"6.747E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPASQGLQK"	"[K].iGPASQGLQk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"486.30035"	"1456.88651"	"1456.88878"	"-1.56"	"-0.00076"	"7/80"	"7"	"80"	"14191482.3775635"	"HCD"	"MS2"	"17.83154"	"263.7"	"46.809"	"35.9966"	"9178"	"9178"	"9161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"399.6"	""	"318.2"	""	"385.5"	""	"417.9"	"0.4"	"485.9"	"490.4"	""	"453"	"30"	"33.000"	"26.000"	"0.0233382456280026"	"19"	"0.0001308"	"0.0002066"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPASQGLQK"	"[K].iGPASQGLQk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"728.94745"	"1456.88762"	"1456.88878"	"-0.80"	"-0.00058"	"9/80"	"9"	"80"	"13221527.1881104"	"HCD"	"MS2"	"0"	"912.4"	"100.000"	"35.8224"	"9106"	"9106"	"9081"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1634.2"	""	"1028.3"	""	"1252.4"	""	"1709.5"	"10.7"	"1433.1"	"1556.8"	""	"463"	"49"	"33.000"	"26.000"	"0.000265186245944642"	"21"	"0"	"0.0001631"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPASQGLQK"	"[K].iGPASQGLQk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"728.94757"	"1456.88786"	"1456.88878"	"-0.63"	"-0.00046"	"9/80"	"9"	"80"	"2131100.10980225"	"HCD"	"MS2"	"6.812326"	"157.6"	"100.000"	"36.0333"	"9149"	"9149"	"9130"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.0"	""	"182.6"	""	"232.2"	""	"262.3"	"0.6"	"263.4"	"290.9"	""	"452"	"44"	"33.000"	"26.000"	"0.00097748125813912"	"17"	"0"	"8.053E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPASQGLQK"	"[K].iGPASQGLQk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"728.94775"	"1456.88823"	"1456.88878"	"-0.38"	"-0.00028"	"9/80"	"9"	"80"	"10647031.5665283"	"HCD"	"MS2"	"0"	"691.8"	"100.000"	"35.7332"	"9026"	"9026"	"9003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1228.2"	""	"835.0"	""	"914.0"	""	"1313.6"	"9.3"	"1067.0"	"1172.3"	""	"452"	"42"	"33.000"	"26.000"	"0.00154564032285603"	"18"	"0.0001308"	"0.0002096"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPASQGLQK"	"[K].iGPASQGLQk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"728.94818"	"1456.88909"	"1456.88878"	"0.21"	"0.00015"	"9/80"	"9"	"80"	"1602865.46337891"	"HCD"	"MS2"	"0"	"128.0"	"100.000"	"36.1408"	"9237"	"9237"	"9209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.3"	""	"167.2"	""	"171.7"	""	"220.6"	""	"219.5"	"241.8"	""	"441"	"51"	"33.000"	"26.000"	"0.000157184093142897"	"18"	"0"	"4.219E-05"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEPSQLLK"	"[R].lAEPSQLLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"728.96051"	"1456.91374"	"1456.91394"	"-0.13"	"-0.00010"	"8/74"	"8"	"74"	"2649795.73199463"	"HCD"	"MS2"	"16.34004"	"192.4"	"100.000"	"47.7283"	"13966"	"13966"	"13938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.1"	""	"275.3"	""	"276.3"	""	"295.3"	""	"346.5"	"391.9"	""	"288"	"25"	"31.000"	"24.000"	"0.0427919908570276"	"18"	"0.0001859"	"0.0003628"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEPSQLLK"	"[R].lAEPSQLLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"728.96082"	"1456.91435"	"1456.91394"	"0.29"	"0.00021"	"8/74"	"8"	"74"	"3131821.73815918"	"HCD"	"MS2"	"15.97209"	"215.7"	"100.000"	"47.4625"	"13809"	"13809"	"13784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"295.7"	""	"310.0"	""	"296.7"	""	"321.5"	""	"375.3"	"446.5"	""	"288"	"51"	"31.000"	"24.000"	"0.000108733280783823"	""	"0"	"0.0001226"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIIAEVVNK"	"[K].iIIAEVVNk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.32617"	"1456.96396"	"1456.95032"	"9.36"	"0.00455"	"9/66"	"9"	"66"	"4150448.88665771"	"HCD"	"MS2"	"42.1472"	"162.7"	"100.000"	"57.4097"	"17846"	"17846"	"17819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.5"	""	"228.7"	""	"224.0"	""	"258.9"	"4.5"	"284.5"	"332.2"	""	"122"	"11"	"27.000"	"20.000"	"0.525206188832607"	"13"	"0.007565"	"0.2944"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIIAEVVNK"	"[K].iIIAEVVNk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.32697"	"1456.96634"	"1456.95032"	"11.00"	"0.00534"	"10/66"	"10"	"66"	"4215262.16119385"	"HCD"	"MS2"	"43.89603"	"161.5"	"100.000"	"57.6203"	"17986"	"17986"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.2"	""	"234.4"	""	"228.7"	""	"250.5"	""	"298.8"	"318.2"	""	"110"	"12"	"27.000"	"20.000"	"0.358395616733463"	"13"	"0.008122"	"0.3436"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAYTQFGGK"	"[K].qAYTQFGGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"729.40955"	"1457.81182"	"1457.81529"	"-2.38"	"-0.00173"	"8/80"	"8"	"80"	"813857.241760254"	"HCD"	"MS2"	"0"	"83.1"	"100.000"	"35.0153"	"8775"	"8775"	"8746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.8"	""	"105.6"	""	"108.8"	""	"129.0"	""	"148.8"	"152.5"	""	"831"	"40"	"36.000"	"29.000"	"0.0041359095090956"	"18"	"0"	"0.0001406"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAYTQFGGK"	"[K].qAYTQFGGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"729.41223"	"1457.81719"	"1457.81529"	"1.30"	"0.00095"	"8/80"	"8"	"80"	"728835.740783691"	"HCD"	"MS2"	"14.43142"	"78.1"	"100.000"	"35.0012"	"8726"	"8726"	"8702"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.7"	""	"96.2"	""	"112.4"	""	"123.2"	"1.2"	"137.9"	"145.3"	""	"843"	"40"	"36.000"	"29.000"	"0.00411905488632874"	"18"	"0"	"0.0001049"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLFSAETK"	"[K].fGLFSAETk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"729.41315"	"1457.81902"	"1457.84044"	"-14.69"	"-0.01071"	"8/70"	"8"	"70"	"2475000.22009277"	"HCD"	"MS2"	"12.67185"	"177.7"	"100.000"	"55.1025"	"16903"	"16903"	"16875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.8"	""	"551.6"	""	"149.6"	""	"215.4"	"5.9"	"253.1"	"274.9"	""	"836"	"15"	"36.000"	"29.000"	"1.30069742891031"	"17"	"0.0003839"	"0.001717"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFMSAFVK"	"[K].lGFMSAFVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.43323"	"1457.85918"	"1457.85906"	"0.08"	"0.00006"	"7/64"	"7"	"64"	"1120320.02227783"	"HCD"	"MS2"	"16.62561"	"110.2"	"100.000"	"71.0938"	"23473"	"23473"	"23450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.4"	""	"170.6"	""	"175.8"	""	"127.6"	""	"180.6"	"211.4"	""	"734"	"36"	"35.000"	"28.000"	"0.0089261887133009"	"15"	"0.0001308"	"0.0002356"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFMSAFVK"	"[K].lGFMSAFVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.43378"	"1457.86028"	"1457.85906"	"0.83"	"0.00061"	"7/64"	"7"	"64"	"927621.918029785"	"HCD"	"MS2"	"0"	"91.4"	"100.000"	"71.1436"	"23442"	"23442"	"23411"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.1"	""	"146.6"	""	"148.4"	""	"107.6"	""	"136.7"	"170.6"	""	"798"	"24"	"36.000"	"29.000"	"0.154515800323725"	"14"	"0.0001889"	"0.0004082"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITSFLELHR"	"[K].lITSFLELHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"0"	"3"	"3"	"0.8727"	"0.0000"	"1"	"1"	"1"	"486.62698"	"1457.86640"	"1457.86777"	"-0.94"	"-0.00046"	"13/80"	"13"	"80"	"3453528.89727783"	"HCD"	"MS2"	"11.58603"	"40.9"	"100.000"	"60.8715"	"19256"	"19256"	"19225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.8"	""	"52.7"	""	"47.7"	""	"73.2"	""	"85.6"	"80.3"	""	"735"	"55"	"35.000"	"28.000"	"0.000118374278079666"	"23"	"0"	"8.126E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITSFLELHR"	"[K].lITSFLELHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"486.62717"	"1457.86695"	"1457.86777"	"-0.56"	"-0.00027"	"13/80"	"13"	"80"	"3456829.86706543"	"HCD"	"MS2"	"9.427558"	"40.8"	"100.000"	"61.0235"	"19371"	"19371"	"19347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.7"	""	"51.2"	""	"53.3"	""	"75.5"	"0.7"	"73.5"	"78.9"	""	"728"	"51"	"35.000"	"28.000"	"0.000294510907300931"	"22"	"0"	"0.0001382"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAAAAALAAK"	"[K].lEAAAAALAAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"486.64059"	"1457.90723"	"1457.90919"	"-1.34"	"-0.00065"	"8/80"	"8"	"80"	"6670703.71948242"	"HCD"	"MS2"	"5.965461"	"207.8"	"100.000"	"55.7314"	"17214"	"17214"	"17189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.4"	""	"316.8"	""	"307.7"	""	"313.6"	"0.3"	"379.6"	"373.0"	""	"410"	"31"	"33.000"	"26.000"	"0.014647174684548"	""	"0.0001308"	"0.0003138"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAAAAALAAK"	"[K].lEAAAAALAAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"486.64090"	"1457.90815"	"1457.90919"	"-0.71"	"-0.00035"	"7/80"	"7"	"80"	"9244257.89044189"	"HCD"	"MS2"	"20.9897"	"261.7"	"85.103"	"55.4952"	"17064"	"17064"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.7"	""	"398.4"	"3.6"	"376.7"	""	"413.0"	"1.8"	"476.7"	"429.9"	""	"400"	"36"	"33.000"	"26.000"	"0.00490941783137006"	""	"0.0001308"	"0.0002432"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYVQHLLK"	"[K].vYVQHLLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.64584"	"1457.92298"	"1457.92444"	"-1.00"	"-0.00049"	"7/66"	"7"	"66"	"8562914.87280273"	"HCD"	"MS2"	"47.71418"	"235.0"	"70.479"	"39.3938"	"10529"	"10529"	"10502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.3"	""	"340.6"	""	"349.0"	""	"388.4"	""	"441.7"	"437.8"	""	"326"	"18"	"32.000"	"25.000"	"0.253622397951627"	"14"	"0.0004166"	"0.002344"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYVQHLLK"	"[K].vYVQHLLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"486.64600"	"1457.92344"	"1457.92444"	"-0.69"	"-0.00034"	"6/66"	"6"	"66"	"24395664.2193604"	"HCD"	"MS2"	"31.80072"	"271.9"	"32.796"	"39.4183"	"10582"	"10582"	"10558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"320.7"	""	"391.0"	""	"408.2"	""	"435.8"	""	"487.8"	"535.7"	""	"324"	"32"	"32.000"	"25.000"	"0.0102686893223622"	"21"	"0.0002277"	"0.001113"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPSPVVIK"	"[R].fLPSPVVIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"486.65411"	"1457.94779"	"1457.94959"	"-1.24"	"-0.00060"	"11/64"	"11"	"64"	"2220565.734375"	"HCD"	"MS2"	"19.06212"	"68.1"	"100.000"	"62.6791"	"20047"	"20047"	"20019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.5"	""	"73.7"	""	"97.9"	""	"113.7"	""	"136.7"	"134.5"	""	"259"	"25"	"31.000"	"24.000"	"0.0422931242663175"	"15"	"0.0002277"	"0.001189"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPSPVVIK"	"[R].fLPSPVVIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.47766"	"1457.94805"	"1457.94959"	"-1.06"	"-0.00077"	"7/64"	"7"	"64"	"4698640.55157471"	"HCD"	"MS2"	"14.64179"	"266.4"	"100.000"	"62.5825"	"20007"	"20007"	"19987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"383.1"	""	"360.7"	""	"378.2"	""	"429.2"	"1.5"	"489.6"	"481.1"	""	"255"	"39"	"31.000"	"24.000"	"0.00179684321798789"	"15"	"0.000523"	"0.0031"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPSPVVIK"	"[R].fLPSPVVIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.47827"	"1457.94927"	"1457.94959"	"-0.22"	"-0.00016"	"7/64"	"7"	"64"	"4133217.8927002"	"HCD"	"MS2"	"18.53631"	"249.2"	"100.000"	"62.4476"	"19899"	"19899"	"19881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"357.6"	""	"335.5"	""	"336.0"	""	"377.5"	"2.8"	"476.7"	"476.3"	""	"253"	"40"	"31.000"	"24.000"	"0.00133687414915528"	"15"	"0.000523"	"0.002843"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPSPVVIK"	"[R].fLPSPVVIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"486.65509"	"1457.95072"	"1457.94959"	"0.77"	"0.00037"	"11/64"	"11"	"64"	"2532959.76708984"	"HCD"	"MS2"	"21.09454"	"77.2"	"100.000"	"62.5053"	"19923"	"19923"	"19897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.5"	""	"105.6"	""	"113.7"	""	"127.0"	""	"134.5"	"144.8"	""	"205"	"28"	"30.000"	"23.000"	"0.0168160451752953"	"17"	"0.0003839"	"0.001697"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPVELGK"	"[R].kPVELGk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.65878"	"1457.96180"	"1457.96586"	"-2.79"	"-0.00136"	"5/60"	"5"	"60"	"14090492.8487549"	"HCD"	"MS2"	"30.14575"	"452.2"	"44.689"	"32.4122"	"7676"	"7676"	"7656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"662.1"	""	"626.6"	""	"665.4"	""	"770.6"	"0.7"	"775.0"	"778.6"	""	"173"	"20"	"29.000"	"22.000"	"0.0816612657987323"	"14"	"0.0003839"	"0.00162"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPVELGK"	"[R].kPVELGk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.66028"	"1457.96628"	"1457.96586"	"0.29"	"0.00014"	"5/60"	"5"	"60"	"17400163.77771"	"HCD"	"MS2"	"39.24592"	"568.5"	"45.394"	"32.4932"	"7752"	"7752"	"7734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"843.5"	""	"774.0"	""	"854.3"	""	"923.8"	""	"979.8"	"1011.5"	""	"166"	"12"	"29.000"	"22.000"	"0.472147932600388"	"13"	"0.0006037"	"0.003795"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILIGETIK"	"[R].lILIGETIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"P35355; Q63921"	"Prostaglandin G/H synthase 2 OS=Rattus norvegicus OX=10116 GN=Ptgs2 PE=1 SV=1; Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"486.66113"	"1457.96885"	"1457.97072"	"-1.29"	"-0.00063"	"10/66"	"10"	"66"	"1559736.76489258"	"HCD"	"MS2"	"17.11517"	"53.5"	"100.000"	"65.2196"	"21032"	"21032"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.0"	""	"77.1"	""	"86.3"	""	"87.9"	"0.3"	"92.9"	"94.8"	""	"166"	"36"	"29.000"	"22.000"	"0.00231781138822699"	""	"0.0001308"	"0.0002562"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILIGETIK"	"[R].lILIGETIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"P35355; Q63921"	"Prostaglandin G/H synthase 2 OS=Rattus norvegicus OX=10116 GN=Ptgs2 PE=1 SV=1; Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"729.48865"	"1457.97002"	"1457.97072"	"-0.48"	"-0.00035"	"8/66"	"8"	"66"	"1857306.6138916"	"HCD"	"MS2"	"28.6125"	"136.5"	"100.000"	"65.1298"	"20995"	"20995"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.3"	""	"245.7"	""	"222.0"	""	"209.6"	"1.2"	"222.7"	"234.3"	""	"156"	"57"	"28.000"	"21.000"	"1.7182826411817E-05"	""	"0"	"8.672E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILIGETIK"	"[R].lILIGETIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"P35355; Q63921"	"Prostaglandin G/H synthase 2 OS=Rattus norvegicus OX=10116 GN=Ptgs2 PE=1 SV=1; Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"0"	"2"	"2"	"0.7091"	"0.0000"	"1"	"1"	"1"	"729.48877"	"1457.97026"	"1457.97072"	"-0.32"	"-0.00023"	"8/66"	"8"	"66"	"2648130.56707764"	"HCD"	"MS2"	"14.49583"	"173.9"	"100.000"	"65.1402"	"21052"	"21052"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.2"	""	"299.1"	""	"285.3"	""	"254.6"	"0.7"	"303.1"	"292.2"	""	"156"	"55"	"28.000"	"21.000"	"2.7484927941314E-05"	""	"0"	"0.0001356"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAMFR.[R]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"486.92462"	"1458.75931"	"1458.76125"	"-1.33"	"-0.00065"	"11/92"	"11"	"92"	"2266022.15093994"	"HCD"	"MS2"	"22.50534"	"35.4"	"100.000"	"61.3506"	"19505"	"19505"	"19475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.8"	""	"48.0"	""	"53.5"	""	"48.2"	"0.3"	"69.5"	"72.9"	""	"693"	"40"	"35.000"	"28.000"	"0.00318202244681561"	"22"	"0.0002277"	"0.001348"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAMFR.[R]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"729.88361"	"1458.75994"	"1458.76125"	"-0.90"	"-0.00066"	"8/92"	"8"	"92"	"9146362.40649414"	"HCD"	"MS2"	"21.61205"	"449.6"	"100.000"	"60.9270"	"19278"	"19278"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"590.3"	""	"701.0"	""	"719.0"	""	"524.3"	""	"847.0"	"880.7"	""	"701"	"47"	"35.000"	"28.000"	"0.000681848708608743"	"21"	"7.476E-05"	"0.0001918"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAMFR.[R]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"729.88397"	"1458.76067"	"1458.76125"	"-0.40"	"-0.00029"	"8/92"	"8"	"92"	"5674924.40234375"	"HCD"	"MS2"	"52.9582"	"399.1"	"100.000"	"61.7150"	"19653"	"19653"	"19635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"495.5"	""	"393.4"	""	"500.8"	""	"516.0"	"1.9"	"1100.7"	"793.3"	""	"686"	"6"	"35.000"	"28.000"	"7.83960389557771"	"15"	"0.0001889"	"0.0003954"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAMFR.[R]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"729.88403"	"1458.76079"	"1458.76125"	"-0.32"	"-0.00023"	"8/92"	"8"	"92"	"10228356.5321655"	"HCD"	"MS2"	"14.29628"	"480.5"	"100.000"	"61.0833"	"19396"	"19396"	"19379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"659.1"	""	"745.0"	""	"783.6"	""	"552.9"	"3.4"	"875.0"	"932.7"	""	"684"	"51"	"35.000"	"28.000"	"0.000269169660075724"	"22"	"0.0001308"	"0.0002123"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAMFR.[R]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"729.88409"	"1458.76091"	"1458.76125"	"-0.23"	"-0.00017"	"8/92"	"8"	"92"	"37808880.2956543"	"HCD"	"MS2"	"0.09084039"	"270.8"	"15.778"	"61.3968"	"19524"	"19524"	"19507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"364.5"	""	"416.9"	""	"456.5"	""	"307.7"	"0.1"	"496.2"	"523.9"	""	"684"	"51"	"35.000"	"28.000"	"0.000260631021428691"	"22"	"0.0001308"	"0.0002513"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAMFR.[R]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"486.92538"	"1458.76160"	"1458.76125"	"0.24"	"0.00012"	"10/92"	"10"	"92"	"3154248.53649902"	"HCD"	"MS2"	"63.26266"	"40.9"	"100.000"	"61.0995"	"19349"	"19349"	"19321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.4"	""	"51.0"	""	"63.6"	""	"63.2"	""	"82.1"	"85.0"	""	"685"	"36"	"35.000"	"28.000"	"0.00768529558895596"	"20"	"0.0002723"	"0.001374"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAMFR.[R]"	"N-Term(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"729.88501"	"1458.76274"	"1458.76125"	"1.02"	"0.00075"	"8/92"	"8"	"92"	"42280537.4238281"	"HCD"	"MS2"	"0"	"296.2"	"14.777"	"61.2287"	"19402"	"19402"	"19385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.2"	""	"443.7"	""	"479.6"	""	"350.5"	"3.3"	"574.6"	"577.6"	""	"704"	"51"	"35.000"	"28.000"	"0.000271983565953687"	"22"	"0.0001889"	"0.0004708"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSLTSNFK"	"[R].fGSLTSNFk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"486.94980"	"1458.83484"	"1458.83569"	"-0.58"	"-0.00028"	"7/74"	"7"	"74"	"8548952.74890137"	"HCD"	"MS2"	"7.484004"	"166.0"	"43.927"	"49.9163"	"14856"	"14856"	"14830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.8"	""	"187.2"	""	"168.8"	""	"364.2"	"3.8"	"360.6"	"296.6"	""	"877"	"41"	"36.000"	"29.000"	"0.00348312930926598"	"20"	"0.0001889"	"0.0004664"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSLTSNFK"	"[R].fGSLTSNFk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"729.92108"	"1458.83489"	"1458.83569"	"-0.55"	"-0.00040"	"14/74"	"14"	"74"	"19836929.8253174"	"HCD"	"MS2"	"1.148789"	"696.4"	"38.872"	"49.8682"	"14836"	"14836"	"14814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"725.8"	""	"785.0"	""	"605.7"	""	"1785.8"	"4.7"	"1574.7"	"1135.3"	""	"877"	"44"	"36.000"	"29.000"	"0.0016254349650166"	"18"	"0.0001889"	"0.0003956"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSLTSNFK"	"[R].fGSLTSNFk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"486.94989"	"1458.83512"	"1458.83569"	"-0.39"	"-0.00019"	"7/74"	"7"	"74"	"10332411.0908203"	"HCD"	"MS2"	"5.262119"	"318.7"	"74.344"	"49.6435"	"14698"	"14698"	"14671"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"361.7"	""	"378.8"	""	"319.5"	""	"728.8"	"6.4"	"682.1"	"548.8"	""	"876"	"35"	"36.000"	"29.000"	"0.0130158972190125"	"16"	"0.0001889"	"0.0004686"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSLTSNFK"	"[R].fGSLTSNFk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"729.92163"	"1458.83599"	"1458.83569"	"0.20"	"0.00015"	"14/74"	"14"	"74"	"15246725.6556396"	"HCD"	"MS2"	"2.479101"	"600.5"	"39.318"	"49.6275"	"14691"	"14691"	"14671"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"651.2"	""	"640.1"	""	"527.8"	""	"1506.5"	"8.4"	"1362.4"	"1009.6"	""	"864"	"42"	"36.000"	"29.000"	"0.00261507257893691"	"22"	"0.0001889"	"0.0004549"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQALDELK"	"[R].aLQALDELk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"729.94836"	"1458.88945"	"1458.89320"	"-2.57"	"-0.00187"	"8/78"	"8"	"78"	"4633463.65270996"	"HCD"	"MS2"	"38.69042"	"302.6"	"100.000"	"55.3749"	"17068"	"17068"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"460.4"	""	"542.1"	""	"422.0"	""	"370.8"	"0.4"	"504.0"	"563.9"	""	"589"	"40"	"34.000"	"27.000"	"0.002845019838625"	""	"0.0001889"	"0.000419"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQALDELK"	"[R].aLQALDELk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"729.94946"	"1458.89165"	"1458.89320"	"-1.06"	"-0.00078"	"11/78"	"11"	"78"	"3894547.98712158"	"HCD"	"MS2"	"30.03312"	"300.6"	"100.000"	"55.1781"	"16934"	"16934"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"422.3"	""	"514.5"	""	"432.0"	""	"383.9"	""	"513.7"	"584.2"	""	"578"	"17"	"34.000"	"27.000"	"0.58196630821023"	"19"	"0.0001889"	"0.0003823"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEIDALK"	"[R].lQAEIDALk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.2683"	"0.0000"	"1"	"1"	"1"	"729.94977"	"1458.89226"	"1458.89320"	"-0.65"	"-0.00047"	"8/82"	"8"	"82"	"2958853.32788086"	"HCD"	"MS2"	"0"	"236.4"	"100.000"	"54.8673"	"16860"	"16860"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"326.7"	""	"310.0"	""	"362.3"	""	"356.2"	""	"406.5"	"481.1"	""	"551"	"41"	"34.000"	"27.000"	"0.00206120697390823"	""	"0.0001308"	"0.0002213"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEIDALK"	"[R].lQAEIDALk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.2549"	"0.0000"	"1"	"1"	"1"	"486.96909"	"1458.89270"	"1458.89320"	"-0.34"	"-0.00017"	"7/82"	"7"	"82"	"2650507.8001709"	"HCD"	"MS2"	"47.28231"	"83.3"	"100.000"	"54.8857"	"16868"	"16868"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.7"	""	"119.6"	""	"116.5"	""	"124.3"	"0.8"	"145.2"	"168.0"	""	"553"	"51"	"34.000"	"27.000"	"0.000244734466118226"	""	"0"	"9.996E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEIDALK"	"[R].lQAEIDALk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.2553"	"0.0000"	"1"	"1"	"1"	"486.96942"	"1458.89371"	"1458.89320"	"0.35"	"0.00017"	"7/82"	"7"	"82"	"2667490.17871094"	"HCD"	"MS2"	"11.10901"	"85.9"	"100.000"	"54.6887"	"16734"	"16734"	"16704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.0"	""	"125.2"	""	"108.5"	""	"135.0"	""	"147.1"	"176.4"	""	"549"	"47"	"34.000"	"27.000"	"0.00060889491723516"	""	"0"	"0.0001013"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEIDALK"	"[R].lQAEIDALk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.2241"	"0.0000"	"1"	"1"	"1"	"729.95062"	"1458.89397"	"1458.89320"	"0.53"	"0.00038"	"8/82"	"8"	"82"	"2705180.18048096"	"HCD"	"MS2"	"42.78703"	"212.3"	"100.000"	"54.5668"	"16684"	"16684"	"16656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.2"	""	"259.1"	""	"299.5"	""	"353.5"	"4.9"	"359.4"	"431.6"	""	"559"	"58"	"34.000"	"27.000"	"4.04931733065761E-05"	""	"0"	"0.0001046"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLWDINK"	"[K].lVLWDINk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.95630"	"1458.90532"	"1458.90846"	"-2.15"	"-0.00157"	"8/58"	"8"	"58"	"667097.253051758"	"HCD"	"MS2"	"100"	"59.2"	"100.000"	"67.3063"	"21881"	"21881"	"21867"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.0"	""	"75.0"	""	"82.4"	""	"107.3"	""	"123.2"	"111.7"	""	"519"	"7"	"34.000"	"27.000"	"5.08320192774804"	"13"	"0.0008731"	"0.009534"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLWDINK"	"[K].lVLWDINk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"729.95782"	"1458.90837"	"1458.90846"	"-0.06"	"-0.00004"	"7/58"	"7"	"58"	"3330361.48571777"	"HCD"	"MS2"	"12.41509"	"244.3"	"100.000"	"66.8951"	"21768"	"21768"	"21747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.7"	""	"331.6"	""	"339.0"	""	"443.9"	"2.9"	"466.3"	"421.2"	""	"508"	"39"	"34.000"	"27.000"	"0.00288292747180768"	"18"	"0.0001889"	"0.0005474"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLWDINK"	"[K].lVLWDINk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"729.95831"	"1458.90935"	"1458.90846"	"0.61"	"0.00045"	"7/58"	"7"	"58"	"3566064.10064697"	"HCD"	"MS2"	"22.39654"	"266.7"	"100.000"	"66.9235"	"21727"	"21727"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"352.3"	""	"378.0"	""	"350.8"	""	"472.1"	"2.9"	"494.9"	"476.9"	""	"493"	"42"	"33.000"	"26.000"	"0.00148189326289628"	"21"	"0.0001889"	"0.0005833"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGATMLLAK"	"[R].vPGATMLLAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"729.95959"	"1458.91191"	"1458.91183"	"0.06"	"0.00004"	"9/72"	"9"	"72"	"3353207.12133789"	"HCD"	"MS2"	"0"	"203.0"	"100.000"	"55.8004"	"17242"	"17242"	"17221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.5"	""	"310.7"	""	"298.9"	""	"276.1"	""	"378.9"	"372.9"	""	"578"	"25"	"34.000"	"27.000"	"0.0899286021423638"	"23"	"0"	"0.0001354"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGATMLLAK"	"[R].vPGATMLLAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"729.96039"	"1458.91350"	"1458.91183"	"1.15"	"0.00084"	"9/72"	"9"	"72"	"9050679.43432617"	"HCD"	"MS2"	"7.440536"	"460.2"	"100.000"	"55.3187"	"16991"	"16991"	"16971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"770.7"	""	"752.6"	""	"694.6"	""	"516.2"	""	"777.4"	"844.3"	""	"519"	"62"	"34.000"	"27.000"	"1.58539455462996E-05"	"24"	"0"	"7.087E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGATMLLAK"	"[R].vPGATMLLAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8167"	"0.0000"	"1"	"1"	"1"	"729.96106"	"1458.91484"	"1458.91183"	"2.07"	"0.00151"	"9/72"	"9"	"72"	"8126415.81622314"	"HCD"	"MS2"	"9.616753"	"426.5"	"100.000"	"55.4828"	"17112"	"17112"	"17093"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"711.1"	""	"714.0"	""	"626.4"	""	"467.3"	"0.7"	"691.6"	"823.8"	""	"515"	"60"	"34.000"	"27.000"	"2.84300244624784E-05"	"27"	"0"	"0.0001573"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILAALESVGK"	"[K].iLAALESVGk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"486.98062"	"1458.92731"	"1458.92959"	"-1.56"	"-0.00076"	"7/74"	"7"	"74"	"1991262.58978271"	"HCD"	"MS2"	"42.15223"	"59.9"	"100.000"	"69.3320"	"22754"	"22754"	"22730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.0"	""	"90.3"	""	"95.1"	""	"86.0"	""	"111.4"	"110.6"	""	"461"	"43"	"33.000"	"26.000"	"0.00127253849754215"	"20"	"0.0002723"	"0.00137"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVVDALSGLK"	"[R].vVVDALSGLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"486.98083"	"1458.92795"	"1458.92959"	"-1.12"	"-0.00054"	"8/78"	"8"	"78"	"4712312.43835449"	"HCD"	"MS2"	"19.24133"	"142.9"	"100.000"	"61.7774"	"19679"	"19679"	"19651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.6"	""	"164.0"	""	"193.6"	""	"224.1"	""	"300.9"	"281.0"	""	"463"	"35"	"33.000"	"26.000"	"0.00672281244508521"	""	"0.0001308"	"0.0002403"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVVDALSGLK"	"[R].vVVDALSGLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"486.98099"	"1458.92841"	"1458.92959"	"-0.81"	"-0.00039"	"8/78"	"8"	"78"	"3255321.75970459"	"HCD"	"MS2"	"56.73188"	"113.0"	"100.000"	"61.5656"	"19539"	"19539"	"19513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.5"	""	"131.0"	""	"141.3"	""	"176.2"	""	"243.9"	"217.7"	""	"463"	"32"	"33.000"	"26.000"	"0.0153656520798042"	""	"0"	"0.0001719"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVVDALSGLK"	"[R].vVVDALSGLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6984"	"0.0000"	"1"	"1"	"1"	"729.96796"	"1458.92864"	"1458.92959"	"-0.65"	"-0.00048"	"9/78"	"9"	"78"	"5892788.45330811"	"HCD"	"MS2"	"39.43015"	"405.7"	"100.000"	"61.7566"	"19670"	"19670"	"19651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"533.6"	""	"432.0"	""	"543.2"	""	"555.3"	""	"985.6"	"810.2"	""	"452"	"63"	"33.000"	"26.000"	"1.06686247325572E-05"	""	"0"	"5.874E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNALTLLIK"	"[R].dNALTLLIk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"486.98108"	"1458.92868"	"1458.92959"	"-0.62"	"-0.00030"	"6/86"	"6"	"86"	"1471076.06774902"	"HCD"	"MS2"	"7.969777"	"53.7"	"100.000"	"63.4990"	"20382"	"20382"	"20355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.4"	""	"67.5"	""	"84.3"	""	"83.5"	"1.6"	"99.3"	"105.3"	""	"452"	"38"	"33.000"	"26.000"	"0.0036316872318091"	"22"	"0.0001889"	"0.0003904"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPTISTQLK"	"[R].iPTISTQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"486.98126"	"1458.92923"	"1458.92959"	"-0.24"	"-0.00012"	"8/74"	"8"	"74"	"9604693.82080078"	"HCD"	"MS2"	"20.26246"	"314.9"	"100.000"	"48.8267"	"14368"	"14368"	"14351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"432.2"	""	"457.8"	""	"434.8"	""	"492.7"	""	"583.1"	"586.4"	""	"448"	"24"	"33.000"	"26.000"	"0.0993683362406408"	"22"	"0.0001889"	"0.001028"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILAALESVGK"	"[K].iLAALESVGk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"486.98129"	"1458.92932"	"1458.92959"	"-0.18"	"-0.00009"	"7/74"	"7"	"74"	"1930755.08935547"	"HCD"	"MS2"	"14.60722"	"61.9"	"100.000"	"69.4535"	"22752"	"22752"	"22730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.5"	""	"80.0"	""	"101.4"	""	"95.8"	"0.1"	"106.6"	"121.5"	""	"448"	"44"	"33.000"	"26.000"	"0.000841875785606114"	"21"	"0.0001889"	"0.0007774"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPTISTQLK"	"[R].iPTISTQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"486.98129"	"1458.92932"	"1458.92959"	"-0.18"	"-0.00009"	"6/74"	"6"	"74"	"15075395.7785034"	"HCD"	"MS2"	"10.4495"	"335.3"	"80.193"	"49.0674"	"14513"	"14513"	"14495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"454.9"	""	"456.4"	""	"463.9"	""	"542.7"	"0.4"	"620.9"	"638.9"	""	"448"	"36"	"33.000"	"26.000"	"0.00607082925543548"	"26"	"0.0001889"	"0.000383"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPTISTQLK"	"[R].iPTISTQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"729.96832"	"1458.92937"	"1458.92959"	"-0.15"	"-0.00011"	"8/74"	"8"	"74"	"4853472.43621826"	"HCD"	"MS2"	"9.1606"	"284.3"	"100.000"	"48.4247"	"14203"	"14203"	"14176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.1"	""	"390.9"	""	"392.3"	""	"485.8"	""	"523.7"	"534.9"	""	"448"	"31"	"33.000"	"26.000"	"0.018165527695926"	"16"	"0.0001889"	"0.0005144"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPTISTQLK"	"[R].iPTISTQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"729.96832"	"1458.92937"	"1458.92959"	"-0.15"	"-0.00011"	"8/74"	"8"	"74"	"20074985.5444336"	"HCD"	"MS2"	"0"	"375.5"	"37.146"	"48.7141"	"14321"	"14321"	"14303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"518.8"	""	"507.7"	""	"521.1"	""	"613.4"	"0.6"	"690.3"	"706.5"	""	"448"	"39"	"33.000"	"26.000"	"0.00263177052306455"	"19"	"0.0001889"	"0.000759"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPTISTQLK"	"[R].iPTISTQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"486.98141"	"1458.92969"	"1458.92959"	"0.07"	"0.00003"	"6/74"	"6"	"74"	"21836146.8609619"	"HCD"	"MS2"	"7.949766"	"559.6"	"100.000"	"48.5256"	"14244"	"14244"	"14224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"755.5"	""	"761.2"	""	"791.1"	""	"926.6"	""	"1015.3"	"1055.6"	""	"448"	"38"	"33.000"	"26.000"	"0.00385698560796865"	""	"0.0001889"	"0.0004226"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVVDALSGLK"	"[R].vVVDALSGLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7031"	"0.0000"	"1"	"1"	"1"	"729.96857"	"1458.92986"	"1458.92959"	"0.19"	"0.00014"	"9/78"	"9"	"78"	"5686850.45245361"	"HCD"	"MS2"	"47.25189"	"408.1"	"100.000"	"61.5912"	"19549"	"19549"	"19529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"525.0"	"2.7"	"436.9"	""	"538.2"	""	"542.6"	""	"1027.4"	"810.4"	""	"448"	"64"	"33.000"	"26.000"	"9.64379607501432E-06"	""	"0"	"8.366E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPTISTQLK"	"[R].iPTISTQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"486.98166"	"1458.93042"	"1458.92959"	"0.57"	"0.00028"	"6/74"	"6"	"74"	"13557108.2776489"	"HCD"	"MS2"	"20.00851"	"366.5"	"100.000"	"48.7567"	"14386"	"14386"	"14367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"494.2"	""	"514.4"	""	"493.2"	""	"595.4"	""	"688.3"	"691.7"	""	"449"	"36"	"33.000"	"26.000"	"0.00595958948663509"	""	"0.0001889"	"0.0004536"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPTISTQLK"	"[R].iPTISTQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"729.96887"	"1458.93047"	"1458.92959"	"0.60"	"0.00044"	"7/74"	"7"	"74"	"22535254.5661621"	"HCD"	"MS2"	"0"	"434.0"	"40.364"	"48.9891"	"14481"	"14481"	"14463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"610.1"	""	"569.6"	""	"595.5"	""	"703.9"	"0.9"	"765.5"	"867.2"	""	"449"	"41"	"33.000"	"26.000"	"0.00192404996254218"	"20"	"0.0001889"	"0.000933"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPTISTQLK"	"[R].iPTISTQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"729.96924"	"1458.93120"	"1458.92959"	"1.11"	"0.00081"	"8/74"	"8"	"74"	"4360806.1394043"	"HCD"	"MS2"	"11.54938"	"242.2"	"100.000"	"48.6969"	"14362"	"14362"	"14335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"339.9"	""	"336.7"	""	"315.0"	""	"413.7"	""	"443.1"	"448.4"	""	"446"	"39"	"33.000"	"26.000"	"0.00268104968919683"	"19"	"0.0001889"	"0.0004187"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTENLVALK"	"[K].lTENLVALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"O35831"	"Cyclin-dependent kinase 17 OS=Rattus norvegicus OX=10116 GN=Cdk17 PE=1 SV=1"	"O35832; O35831"	"Cyclin-dependent kinase 18 OS=Rattus norvegicus OX=10116 GN=Cdk18 PE=1 SV=1; Cyclin-dependent kinase 17 OS=Rattus norvegicus OX=10116 GN=Cdk17 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"729.97009"	"1458.93291"	"1458.92959"	"2.28"	"0.00166"	"13/76"	"13"	"76"	"1344022.59698486"	"HCD"	"MS2"	"63.07591"	"104.4"	"100.000"	"54.6397"	"16767"	"16767"	"16741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.6"	""	"147.6"	""	"143.9"	""	"189.1"	""	"184.1"	"192.7"	""	"457"	"18"	"33.000"	"26.000"	"0.3257513351381"	"25"	"0.0002277"	"0.001187"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYTLLSGLYK"	"[-].mYTLLSGLYk.[Y]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63055"	"ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus OX=10116 GN=Arfrp1 PE=2 SV=1"	"Q63055"	"ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus OX=10116 GN=Arfrp1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.40619"	"1459.80510"	"1459.80681"	"-1.17"	"-0.00085"	"5/78"	"5"	"78"	"134231.840637207"	"HCD"	"MS2"	"25.64497"	"4.5"	"100.000"	"96.8280"	"33270"	"33270"	"33263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.1"	""	"6.1"	""	"8.9"	""	"6.9"	""	"8.2"	"7.9"	""	"1006"	"17"	"37.000"	"30.000"	"1.01757864687517"	"14"	"0.004819"	"0.1409"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYTLLSGLYK"	"[-].mYTLLSGLYk.[Y]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63055"	"ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus OX=10116 GN=Arfrp1 PE=2 SV=1"	"Q63055"	"ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus OX=10116 GN=Arfrp1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.40759"	"1459.80791"	"1459.80681"	"0.76"	"0.00055"	"5/78"	"5"	"78"	"152498.825561523"	"HCD"	"MS2"	"24.37269"	"4.2"	"100.000"	"96.6389"	"33206"	"33206"	"33199"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"5.8"	""	"6.1"	""	"5.9"	""	"7.2"	"9.2"	""	"997"	"23"	"36.000"	"29.000"	"0.249267215686024"	"14"	"0.001966"	"0.0281"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLASLSIQNEK"	"[K].KLASLSIQNEk.[R]"	"K11(TMT6plex)"	"1"	"1"	"Q7M6Z5"	"Kinesin-like protein KIF27 OS=Rattus norvegicus OX=10116 GN=Kif27 PE=1 SV=1"	"Q7M6Z5"	"Kinesin-like protein KIF27 OS=Rattus norvegicus OX=10116 GN=Kif27 PE=1 SV=1"	"1"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"3"	"730.43732"	"1459.86736"	"1459.86816"	"-0.55"	"-0.00040"	"8/112"	"8"	"112"	"7357400.00091553"	"HCD"	"MS2"	"2.361226"	"603.0"	"100.000"	"51.2512"	"15349"	"15349"	"15330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"913.0"	""	"726.5"	""	"889.1"	""	"902.8"	""	"982.9"	"1297.6"	""	"749"	"20"	"35.000"	"28.000"	"0.356001495224278"	"25"	"0.003262"	"0.06771"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLASLSIQNEK"	"[K].KLASLSIQNEk.[R]"	"K11(TMT6plex)"	"1"	"1"	"Q7M6Z5"	"Kinesin-like protein KIF27 OS=Rattus norvegicus OX=10116 GN=Kif27 PE=1 SV=1"	"Q7M6Z5"	"Kinesin-like protein KIF27 OS=Rattus norvegicus OX=10116 GN=Kif27 PE=1 SV=1"	"1"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"3"	"730.43750"	"1459.86772"	"1459.86816"	"-0.30"	"-0.00022"	"8/112"	"8"	"112"	"8267093.59326172"	"HCD"	"MS2"	"1.226966"	"656.2"	"100.000"	"51.4097"	"15464"	"15464"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"996.7"	""	"782.3"	""	"963.1"	""	"1000.4"	"3.0"	"1046.3"	"1422.0"	""	"746"	"23"	"35.000"	"28.000"	"0.168542267251846"	"26"	"0.005353"	"0.1646"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPLIPVGK"	"[K].dYPLIPVGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"487.30197"	"1459.89136"	"1459.89247"	"-0.76"	"-0.00037"	"9/64"	"9"	"64"	"7022263.07678223"	"HCD"	"MS2"	"15.32914"	"203.1"	"100.000"	"51.9785"	"15697"	"15697"	"15670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.5"	""	"244.5"	""	"246.9"	""	"381.2"	"3.1"	"388.1"	"375.2"	""	"692"	"33"	"35.000"	"28.000"	"0.0164845121434674"	"19"	"0.0001889"	"0.0006628"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPLIPVGK"	"[K].dYPLIPVGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"487.30219"	"1459.89200"	"1459.89247"	"-0.32"	"-0.00016"	"8/64"	"8"	"64"	"7986220.76879883"	"HCD"	"MS2"	"10.73806"	"235.8"	"100.000"	"51.8083"	"15577"	"15577"	"15554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"325.2"	""	"283.0"	""	"305.4"	""	"413.4"	""	"455.4"	"455.0"	""	"692"	"27"	"35.000"	"28.000"	"0.0654750892051162"	"16"	"0.0001889"	"0.001111"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPLIPVGK"	"[K].dYPLIPVGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"730.44977"	"1459.89226"	"1459.89247"	"-0.15"	"-0.00011"	"5/64"	"5"	"64"	"6207481.34106445"	"HCD"	"MS2"	"18.90904"	"299.7"	"99.821"	"52.0337"	"15669"	"15669"	"15650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.5"	""	"390.9"	""	"411.1"	""	"487.0"	"3.5"	"591.1"	"579.8"	""	"692"	"26"	"35.000"	"28.000"	"0.0907979616011018"	"21"	"0.0001889"	"0.0006568"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPLIPVGK"	"[K].dYPLIPVGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"730.45001"	"1459.89275"	"1459.89247"	"0.19"	"0.00014"	"13/64"	"13"	"64"	"5553206.33221436"	"HCD"	"MS2"	"21.46173"	"319.6"	"100.000"	"51.7369"	"15548"	"15548"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.4"	""	"402.0"	""	"396.9"	""	"572.6"	"3.1"	"595.9"	"594.2"	""	"645"	"43"	"35.000"	"28.000"	"0.00176006910201935"	"25"	"0.0001308"	"0.0002487"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPLIPVGK"	"[K].dYPLIPVGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"730.45026"	"1459.89324"	"1459.89247"	"0.52"	"0.00038"	"6/64"	"6"	"64"	"5899763.2923584"	"HCD"	"MS2"	"18.92673"	"330.1"	"100.000"	"51.9394"	"15681"	"15681"	"15654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"483.9"	""	"405.2"	""	"414.9"	""	"600.6"	"3.3"	"606.0"	"614.5"	""	"645"	"41"	"35.000"	"28.000"	"0.0023688072248067"	"24"	"0.0001308"	"0.0002589"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPLIPVGK"	"[K].dYPLIPVGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"730.45050"	"1459.89372"	"1459.89247"	"0.86"	"0.00063"	"11/64"	"11"	"64"	"6635510.2310791"	"HCD"	"MS2"	"19.89072"	"317.8"	"100.000"	"52.2339"	"15801"	"15801"	"15782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"419.8"	"2.5"	"386.4"	""	"428.2"	""	"539.7"	"4.7"	"630.2"	"602.5"	""	"645"	"26"	"35.000"	"28.000"	"0.0876051664200605"	"21"	"0.0002277"	"0.001122"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILELIESGK"	"[K].iLELIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"730.45801"	"1459.90874"	"1459.91360"	"-3.33"	"-0.00243"	"8/72"	"8"	"72"	"3512706.89697266"	"HCD"	"MS2"	"57.81826"	"178.1"	"100.000"	"69.6630"	"22838"	"22838"	"22810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.9"	""	"250.7"	""	"262.6"	""	"263.6"	""	"352.3"	"326.2"	""	"593"	"26"	"34.000"	"27.000"	"0.0772724527574673"	"21"	"0.0001859"	"0.0003625"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILELIESGK"	"[K].iLELIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"487.30807"	"1459.90967"	"1459.91360"	"-2.69"	"-0.00131"	"10/72"	"10"	"72"	"2431075.74920654"	"HCD"	"MS2"	"41.22713"	"77.3"	"100.000"	"69.5735"	"22853"	"22853"	"22826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.4"	""	"101.0"	""	"116.7"	""	"128.2"	"0.8"	"143.7"	"141.2"	""	"593"	"38"	"34.000"	"27.000"	"0.00467761741465857"	"26"	"0.0001889"	"0.0005734"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILELIESGK"	"[K].iLELIESGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"730.45905"	"1459.91081"	"1459.91360"	"-1.91"	"-0.00139"	"7/72"	"7"	"72"	"3260236.57702637"	"HCD"	"MS2"	"55.21411"	"178.4"	"100.000"	"69.5253"	"22833"	"22833"	"22810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.7"	""	"264.3"	""	"254.2"	""	"267.9"	""	"340.6"	"333.9"	""	"593"	"38"	"34.000"	"27.000"	"0.00523630213833448"	""	"0.0001859"	"0.0003362"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLKPVELR"	"[K].fLkPVELR.[L]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"487.31775"	"1459.93869"	"1459.94009"	"-0.96"	"-0.00047"	"6/66"	"6"	"66"	"14257728.6142578"	"HCD"	"MS2"	"43.08832"	"700.0"	"83.897"	"42.4871"	"11834"	"11834"	"11811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"795.0"	""	"915.4"	""	"890.5"	""	"1210.8"	""	"1330.0"	"1502.4"	""	"346"	"1"	"32.000"	"25.000"	"15.033015426653"	"13"	"0.000523"	"0.002989"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLKPVELR"	"[K].fLkPVELR.[L]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"487.31805"	"1459.93961"	"1459.94009"	"-0.33"	"-0.00016"	"6/66"	"6"	"66"	"15112217.6174316"	"HCD"	"MS2"	"23.93896"	"721.1"	"78.997"	"42.2650"	"11699"	"11699"	"11676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"826.3"	""	"923.3"	""	"943.7"	""	"1235.7"	""	"1350.1"	"1569.9"	""	"346"	"1"	"32.000"	"25.000"	"14.1920817169059"	"13"	"0.0003839"	"0.001655"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSPNVLNWR"	"[R].vFSPNVLNWR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"487.61157"	"1460.82016"	"1460.82115"	"-0.68"	"-0.00033"	"11/82"	"11"	"82"	"3113633.9107666"	"HCD"	"MS2"	"0"	"40.2"	"100.000"	"63.3052"	"20303"	"20303"	"20275"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.1"	""	"67.2"	""	"62.3"	""	"59.5"	"1.5"	"55.9"	"63.9"	""	"997"	"36"	"36.000"	"29.000"	"0.0120133785620027"	"20"	"0.0001889"	"0.0004269"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSPNVLNWR"	"[R].vFSPNVLNWR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.91382"	"1460.82036"	"1460.82115"	"-0.54"	"-0.00039"	"7/82"	"7"	"82"	"12368677.5167236"	"HCD"	"MS2"	"1.973985"	"320.8"	"53.929"	"63.3952"	"20340"	"20340"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"721.8"	""	"623.0"	""	"571.6"	""	"402.2"	"0.5"	"316.9"	"378.5"	""	"1001"	"32"	"36.000"	"30.000"	"0.029950500332769"	"15"	"0.000494"	"0.002645"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSPNVLNWR"	"[R].vFSPNVLNWR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"487.61191"	"1460.82117"	"1460.82115"	"0.01"	"0.00001"	"10/82"	"10"	"82"	"2589832.93395996"	"HCD"	"MS2"	"21.31132"	"44.1"	"100.000"	"63.2884"	"20243"	"20243"	"20217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.4"	""	"58.9"	""	"70.2"	""	"71.7"	""	"75.8"	"76.3"	""	"998"	"28"	"36.000"	"29.000"	"0.0736377560104671"	"16"	"0.0001859"	"0.0003642"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTFELFSK"	"[K].mTFELFSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.91455"	"1460.82182"	"1460.82234"	"-0.36"	"-0.00026"	"14/66"	"14"	"66"	"2887334.81536865"	"HCD"	"MS2"	"11.11132"	"259.6"	"100.000"	"65.5230"	"21208"	"21208"	"21187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"481.0"	""	"400.4"	""	"468.8"	""	"281.9"	""	"386.9"	"433.6"	""	"995"	"41"	"36.000"	"29.000"	"0.00363741694033"	"15"	"0.0001889"	"0.0006338"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTFELFSK"	"[K].mTFELFSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"730.91504"	"1460.82280"	"1460.82234"	"0.31"	"0.00023"	"14/66"	"14"	"66"	"2555830.97644043"	"HCD"	"MS2"	"14.49218"	"246.0"	"100.000"	"65.5838"	"21180"	"21180"	"21161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"451.8"	""	"356.6"	""	"448.7"	""	"253.1"	"4.6"	"378.1"	"430.7"	""	"1003"	"41"	"37.000"	"30.000"	"0.00368358704880793"	"19"	"0.0001889"	"0.0003929"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLmNLGGLAVAR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"730.92517"	"1460.84307"	"1460.84565"	"-1.77"	"-0.00129"	"11/104"	"11"	"104"	"3096230.55688477"	"HCD"	"MS2"	"0"	"132.7"	"100.000"	"46.3263"	"13392"	"13392"	"13376"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.9"	""	"152.0"	""	"174.4"	""	"344.2"	"5.9"	"218.6"	"216.1"	""	"902"	"50"	"36.000"	"29.000"	"0.000491107472093378"	"24"	"0"	"4.356E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLmNLGGLAVAR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"730.92523"	"1460.84319"	"1460.84565"	"-1.69"	"-0.00123"	"11/104"	"11"	"104"	"6681112.69042969"	"HCD"	"MS2"	"13.1309"	"272.9"	"100.000"	"46.3464"	"13353"	"13353"	"13336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.2"	""	"326.7"	""	"373.5"	""	"667.2"	"3.0"	"448.3"	"457.1"	""	"902"	"50"	"36.000"	"29.000"	"0.000439720326610541"	"25"	"0"	"4.161E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLmNLGGLAVAR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"730.92535"	"1460.84343"	"1460.84565"	"-1.52"	"-0.00111"	"11/104"	"11"	"104"	"5072222.2043457"	"HCD"	"MS2"	"0"	"192.9"	"100.000"	"45.5746"	"13090"	"13090"	"13067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.9"	""	"218.5"	""	"240.8"	""	"552.1"	"4.2"	"301.7"	"296.0"	""	"971"	"49"	"36.000"	"29.000"	"0.000545995714860942"	"25"	"0"	"3.202E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLmNLGGLAVAR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"730.92548"	"1460.84368"	"1460.84565"	"-1.35"	"-0.00099"	"11/104"	"11"	"104"	"2742694.777771"	"HCD"	"MS2"	"0"	"119.4"	"100.000"	"46.0415"	"13228"	"13228"	"13197"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.3"	""	"129.4"	""	"154.2"	""	"312.3"	"4.8"	"200.4"	"185.7"	""	"971"	"49"	"36.000"	"29.000"	"0.000595921746727407"	"25"	"0"	"2.421E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLmNLGGLAVAR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"730.92572"	"1460.84416"	"1460.84565"	"-1.02"	"-0.00074"	"10/104"	"10"	"104"	"6257457.11505127"	"HCD"	"MS2"	"3.206347"	"253.4"	"100.000"	"46.6493"	"13524"	"13524"	"13506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.0"	""	"304.6"	""	"341.4"	""	"623.2"	""	"395.4"	"428.7"	""	"964"	"53"	"36.000"	"29.000"	"0.000230699704499512"	""	"0"	"4.531E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLmNLGGLAVAR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.92578"	"1460.84429"	"1460.84565"	"-0.93"	"-0.00068"	"9/104"	"9"	"104"	"3113835.99859619"	"HCD"	"MS2"	"0"	"144.3"	"100.000"	"45.6150"	"13053"	"13053"	"13035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.9"	""	"152.8"	""	"191.4"	""	"372.4"	"0.1"	"246.0"	"242.2"	""	"964"	"50"	"36.000"	"29.000"	"0.000535854692549727"	"16"	"0"	"8.156E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLmNLGGLAVAR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"730.92596"	"1460.84465"	"1460.84565"	"-0.68"	"-0.00050"	"9/104"	"9"	"104"	"3444118.19671631"	"HCD"	"MS2"	"0"	"155.3"	"100.000"	"45.8677"	"13206"	"13206"	"13190"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.4"	""	"185.8"	""	"196.5"	""	"391.3"	""	"249.2"	"266.1"	""	"975"	"50"	"36.000"	"29.000"	"0.000535765346723354"	"25"	"0"	"2.651E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMNLGGLAVAR"	"[R].tLmNLGGLAVAR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"730.92603"	"1460.84477"	"1460.84565"	"-0.60"	"-0.00044"	"9/104"	"9"	"104"	"5413129.30828857"	"HCD"	"MS2"	"0"	"219.0"	"100.000"	"45.3265"	"12940"	"12940"	"12912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.5"	""	"224.5"	""	"268.6"	""	"639.4"	""	"342.1"	"372.9"	""	"972"	"53"	"36.000"	"29.000"	"0.000219601988966212"	"25"	"0"	"1.88E-05"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPPVPQVYR"	"[R].lYPPVPQVYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"730.92664"	"1460.84599"	"1460.84630"	"-0.21"	"-0.00015"	"6/80"	"6"	"80"	"2854431.20141602"	"HCD"	"MS2"	"8.684526"	"166.6"	"100.000"	"49.4512"	"14667"	"14667"	"14638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.8"	""	"229.5"	""	"245.2"	""	"256.2"	"3.2"	"312.2"	"316.1"	""	"889"	"12"	"36.000"	"29.000"	"3.01906014698339"	"20"	"0.00103"	"0.01121"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPPVPQVYR"	"[R].lYPPVPQVYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"730.92719"	"1460.84709"	"1460.84630"	"0.54"	"0.00040"	"5/80"	"5"	"80"	"6689509.44793701"	"HCD"	"MS2"	"2.554396"	"273.4"	"100.000"	"49.7428"	"14785"	"14785"	"14766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.7"	""	"354.4"	""	"414.9"	""	"425.0"	""	"528.2"	"527.6"	""	"881"	"20"	"36.000"	"29.000"	"0.42652639568308"	"22"	"0.0001308"	"0.0002314"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPPVPQVYR"	"[R].lYPPVPQVYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"730.92731"	"1460.84734"	"1460.84630"	"0.71"	"0.00052"	"8/80"	"8"	"80"	"3638898.10906982"	"HCD"	"MS2"	"17.21365"	"167.6"	"100.000"	"49.2868"	"14556"	"14556"	"14527"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.8"	""	"247.0"	""	"237.3"	""	"268.2"	"2.0"	"305.7"	"317.6"	""	"881"	"24"	"36.000"	"29.000"	"0.184054276507837"	"21"	"0.0006037"	"0.004212"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLINQTTAK"	"[K].nLINQTTAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"Q7TSU1; D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Arfgef2 PE=1 SV=1; Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"730.94598"	"1460.88469"	"1460.88370"	"0.68"	"0.00050"	"8/82"	"8"	"82"	"417223.77947998"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"33.7127"	"8202"	"8202"	"8174"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.7"	""	"45.7"	""	"51.1"	""	"59.6"	"1.5"	"71.4"	"74.2"	""	"769"	"47"	"35.000"	"28.000"	"0.000691665866867018"	"21"	"0"	"3.822E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLINQTTAK"	"[K].nLINQTTAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"Q7TSU1; D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Arfgef2 PE=1 SV=1; Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"730.94604"	"1460.88481"	"1460.88370"	"0.76"	"0.00056"	"8/82"	"8"	"82"	"576339.588012695"	"HCD"	"MS2"	"0"	"51.5"	"100.000"	"33.7221"	"8249"	"8249"	"8222"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.4"	""	"64.3"	""	"65.3"	""	"91.2"	""	"85.9"	"108.7"	""	"769"	"55"	"35.000"	"28.000"	"0.000122150808016484"	"25"	"0"	"3.399E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILEQMQK"	"[R].lILEQMQk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"730.94775"	"1460.88823"	"1460.89109"	"-1.96"	"-0.00143"	"6/62"	"6"	"62"	"4990812.36651611"	"HCD"	"MS2"	"25.91272"	"416.1"	"100.000"	"49.9849"	"14884"	"14884"	"14862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"627.4"	""	"586.1"	""	"609.4"	""	"567.3"	""	"794.9"	"761.4"	""	"719"	"41"	"35.000"	"28.000"	"0.00270208430399545"	""	"0.0001889"	"0.001073"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILEQMQK"	"[R].lILEQMQk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"730.94812"	"1460.88896"	"1460.89109"	"-1.46"	"-0.00106"	"6/62"	"6"	"62"	"4604996.3225708"	"HCD"	"MS2"	"22.91206"	"377.6"	"96.935"	"49.7399"	"14737"	"14737"	"14719"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"582.2"	""	"516.3"	""	"533.8"	""	"530.9"	""	"736.2"	"678.7"	""	"713"	"41"	"35.000"	"28.000"	"0.00274195001962176"	""	"0.0001889"	"0.0006276"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQTAELTK"	"[K].lVQTAELTk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"730.95856"	"1460.90984"	"1460.90885"	"0.68"	"0.00049"	"14/84"	"14"	"84"	"3287416.82263184"	"HCD"	"MS2"	"26.89195"	"277.5"	"100.000"	"41.6023"	"11431"	"11431"	"11403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"375.5"	""	"329.9"	""	"336.6"	""	"510.8"	"1.1"	"529.9"	"548.6"	""	"640"	"47"	"35.000"	"28.000"	"0.000700083719663856"	"28"	"0"	"0.0001589"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPILSANIK"	"[K].fPILSANIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"487.64569"	"1460.92252"	"1460.92411"	"-1.09"	"-0.00053"	"7/68"	"7"	"68"	"1529747.16125488"	"HCD"	"MS2"	"25.10699"	"63.4"	"100.000"	"61.4986"	"19512"	"19512"	"19481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.8"	""	"63.1"	""	"67.8"	""	"132.2"	""	"136.6"	"144.8"	""	"470"	"34"	"33.000"	"26.000"	"0.00863113406170498"	"22"	"0.0001889"	"0.0003758"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVSVNVK"	"[R].kVSVNVk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"730.99231"	"1460.97734"	"1460.97676"	"0.40"	"0.00029"	"12/60"	"12"	"60"	"626472.361755371"	"HCD"	"MS2"	"0"	"52.8"	"100.000"	"30.9813"	"7133"	"7133"	"7104"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.3"	""	"71.7"	""	"64.9"	""	"88.5"	"0.4"	"95.6"	"109.2"	""	"111"	"29"	"27.000"	"20.000"	"0.00674983230358735"	""	"0.0006037"	"0.005121"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVSVNVK"	"[R].kVSVNVk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"730.99255"	"1460.97783"	"1460.97676"	"0.73"	"0.00054"	"6/60"	"6"	"60"	"929860.526550293"	"HCD"	"MS2"	"0"	"72.1"	"100.000"	"30.8669"	"7047"	"7047"	"7016"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.3"	""	"96.6"	""	"90.9"	""	"112.7"	""	"140.3"	"150.0"	""	"111"	"28"	"27.000"	"20.000"	"0.00940357479248267"	""	"0.0006037"	"0.005044"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVSVNVK"	"[R].kVSVNVk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"487.66425"	"1460.97818"	"1460.97676"	"0.97"	"0.00047"	"10/60"	"10"	"60"	"142565521.368652"	"HCD"	"MS2"	"7.015656"	"1033.9"	"10.931"	"30.9517"	"7121"	"7121"	"7104"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1341.0"	""	"1336.7"	""	"1248.0"	""	"1676.6"	""	"1986.8"	"2236.3"	""	"111"	"16"	"27.000"	"20.000"	"0.146991757692672"	"13"	"0.004346"	"0.1193"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVSVNVK"	"[R].kVSVNVk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"487.66449"	"1460.97892"	"1460.97676"	"1.48"	"0.00072"	"10/60"	"10"	"60"	"132251760.476563"	"HCD"	"MS2"	"7.28059"	"915.5"	"10.336"	"30.8717"	"7049"	"7049"	"7032"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1161.4"	""	"1182.1"	""	"1113.5"	""	"1489.5"	""	"1788.7"	"1964.7"	""	"111"	"15"	"27.000"	"20.000"	"0.167993695259623"	"13"	"0.004346"	"0.1251"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWTLTAPPGFR"	"[R].sWTLTAPPGFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJS8"	"Mannan-binding lectin serine protease 2 OS=Rattus norvegicus OX=10116 GN=Masp2 PE=1 SV=2"	"Q9JJS8"	"Mannan-binding lectin serine protease 2 OS=Rattus norvegicus OX=10116 GN=Masp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"731.40588"	"1461.80449"	"1461.80517"	"-0.46"	"-0.00034"	"12/88"	"12"	"88"	"2640485.9765625"	"HCD"	"MS2"	"44.46058"	"153.9"	"100.000"	"56.0121"	"17329"	"17329"	"17301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"221.2"	""	"219.2"	""	"217.7"	""	"253.8"	""	"269.9"	"276.7"	""	"1076"	"23"	"37.000"	"30.000"	"0.267782551718668"	"20"	"0.0003839"	"0.001972"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWTLTAPPGFR"	"[R].sWTLTAPPGFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJS8"	"Mannan-binding lectin serine protease 2 OS=Rattus norvegicus OX=10116 GN=Masp2 PE=1 SV=2"	"Q9JJS8"	"Mannan-binding lectin serine protease 2 OS=Rattus norvegicus OX=10116 GN=Masp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"731.40637"	"1461.80547"	"1461.80517"	"0.21"	"0.00015"	"6/88"	"6"	"88"	"2495351.06884766"	"HCD"	"MS2"	"45.66452"	"144.4"	"100.000"	"55.8270"	"17199"	"17199"	"17179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"201.0"	""	"218.0"	""	"191.5"	""	"234.3"	""	"270.8"	"255.0"	""	"1066"	"21"	"37.000"	"30.000"	"0.451572211736938"	"20"	"0.0001889"	"0.0008831"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQETGFFK"	"[K].fQETGFFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R424"	"STAM-binding protein OS=Rattus norvegicus OX=10116 GN=Stambp PE=2 SV=1"	"Q8R424"	"STAM-binding protein OS=Rattus norvegicus OX=10116 GN=Stambp PE=2 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"731.40802"	"1461.80876"	"1461.81422"	"-3.73"	"-0.00273"	"6/70"	"6"	"70"	"2903456.82165527"	"HCD"	"MS2"	"28.43944"	"227.5"	"100.000"	"52.4115"	"15874"	"15874"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"297.1"	""	"310.4"	""	"319.1"	""	"357.8"	"0.1"	"436.7"	"435.9"	""	"1104"	"11"	"37.000"	"30.000"	"4.09203253198106"	"22"	"0.0003839"	"0.001791"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVQNLMVLR"	"[K].eMVQNLMVLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"731.40936"	"1461.81145"	"1461.81191"	"-0.31"	"-0.00023"	"8/84"	"8"	"84"	"3341863.03692627"	"HCD"	"MS2"	"2.824284"	"176.6"	"100.000"	"56.3042"	"17448"	"17448"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.9"	""	"289.1"	""	"282.5"	""	"178.7"	""	"320.0"	"334.7"	""	"1063"	"52"	"37.000"	"30.000"	"0.000347138888732131"	"27"	"0"	"6.161E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVQNLMVLR"	"[K].eMVQNLMVLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"731.40991"	"1461.81255"	"1461.81191"	"0.44"	"0.00032"	"8/84"	"8"	"84"	"3319950.71331787"	"HCD"	"MS2"	"0"	"175.6"	"100.000"	"56.1377"	"17326"	"17326"	"17307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.4"	""	"290.6"	""	"263.3"	""	"196.4"	"1.4"	"313.5"	"326.9"	""	"1080"	"52"	"37.000"	"30.000"	"0.000343869581290274"	"27"	"0"	"8.928E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWTLVSEQTR"	"[K].lWTLVSEQTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"731.41632"	"1461.82536"	"1461.82629"	"-0.64"	"-0.00046"	"8/88"	"8"	"88"	"4865097.56018066"	"HCD"	"MS2"	"7.744254"	"234.7"	"100.000"	"58.3646"	"18236"	"18236"	"18218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.4"	""	"370.3"	""	"361.4"	""	"357.5"	"2.2"	"409.7"	"358.2"	""	"1019"	"46"	"37.000"	"30.000"	"0.00134941082062011"	"28"	"0"	"7.074E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWTLVSEQTR"	"[K].lWTLVSEQTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"3"	"3"	"0.5500"	"0.0000"	"1"	"1"	"1"	"487.94669"	"1461.82550"	"1461.82629"	"-0.54"	"-0.00026"	"11/88"	"11"	"88"	"1164972.50030518"	"HCD"	"MS2"	"38.98499"	"33.9"	"100.000"	"58.6253"	"18397"	"18397"	"18373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.2"	""	"43.3"	""	"44.6"	""	"55.3"	""	"73.4"	"72.2"	""	"1019"	"20"	"37.000"	"30.000"	"0.545939086018561"	"22"	"0.0001889"	"0.0008755"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWTLVSEQTR"	"[K].lWTLVSEQTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"731.41693"	"1461.82659"	"1461.82629"	"0.20"	"0.00015"	"8/88"	"8"	"88"	"5103713.70526123"	"HCD"	"MS2"	"15.12861"	"235.8"	"100.000"	"58.5336"	"18359"	"18359"	"18341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"378.5"	""	"348.2"	""	"382.7"	""	"362.0"	"0.8"	"383.5"	"373.2"	""	"1020"	"45"	"37.000"	"30.000"	"0.00161647940615218"	"27"	"0"	"9.096E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLFASGQNLAR"	"[K].gVLFASGQNLAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"731.42249"	"1461.83769"	"1461.83753"	"0.11"	"0.00008"	"9/96"	"9"	"96"	"8126815.42614746"	"HCD"	"MS2"	"47.14397"	"449.6"	"100.000"	"42.4780"	"11830"	"11830"	"11811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"542.7"	""	"678.1"	""	"679.4"	""	"620.2"	"6.1"	"852.2"	"884.6"	""	"996"	"38"	"36.000"	"29.000"	"0.00774870884539328"	"18"	"0"	"1.149E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLFASGQNLAR"	"[K].gVLFASGQNLAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"731.42297"	"1461.83867"	"1461.83753"	"0.78"	"0.00057"	"11/96"	"11"	"96"	"8176505.76940918"	"HCD"	"MS2"	"42.45032"	"375.0"	"72.845"	"42.2556"	"11695"	"11695"	"11676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"433.2"	""	"565.1"	""	"573.0"	""	"511.9"	"2.4"	"726.6"	"744.4"	""	"1068"	"40"	"37.000"	"30.000"	"0.0058551935674046"	"19"	"0"	"2.061E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVIMGAPGSGK"	"[R].aVImGAPGSGk.[G]"	"N-Term(TMT6plex); M4(Oxidation); K11(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"731.42725"	"1461.84722"	"1461.84996"	"-1.87"	"-0.00137"	"10/80"	"10"	"80"	"436959.332946777"	"HCD"	"MS2"	"0"	"28.6"	"100.000"	"32.6358"	"7811"	"7811"	"7782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.6"	""	"41.3"	""	"43.7"	""	"48.1"	"0.8"	"47.8"	"51.5"	""	"936"	"56"	"36.000"	"29.000"	"0.000105741594046342"	"24"	"0.0001889"	"0.0007371"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVIMGAPGSGK"	"[R].aVImGAPGSGk.[G]"	"N-Term(TMT6plex); M4(Oxidation); K11(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"731.42920"	"1461.85112"	"1461.84996"	"0.80"	"0.00058"	"10/80"	"10"	"80"	"413115.581665039"	"HCD"	"MS2"	"0"	"27.5"	"100.000"	"32.5496"	"7733"	"7733"	"7704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.2"	""	"38.9"	""	"40.2"	""	"51.5"	"0.5"	"42.8"	"44.6"	""	"961"	"42"	"36.000"	"29.000"	"0.00275228492888691"	"19"	"0.0001889"	"0.0006395"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNFLSPSLSR"	"[M].vLNFLSPSLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"731.43445"	"1461.86162"	"1461.86268"	"-0.73"	"-0.00053"	"10/104"	"10"	"104"	"4303167.76013184"	"HCD"	"MS2"	"29.2674"	"203.3"	"100.000"	"65.2438"	"21094"	"21094"	"21075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.6"	""	"279.2"	""	"295.6"	""	"344.5"	""	"378.0"	"390.2"	""	"840"	"39"	"36.000"	"29.000"	"0.00523901075982036"	"21"	"0"	"3.884E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNFLSPSLSR"	"[M].vLNFLSPSLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"731.43488"	"1461.86247"	"1461.86268"	"-0.14"	"-0.00010"	"8/104"	"8"	"104"	"2980866.60339355"	"HCD"	"MS2"	"47.55059"	"237.7"	"100.000"	"65.5494"	"21166"	"21166"	"21145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.4"	""	"355.2"	""	"416.7"	""	"283.7"	""	"392.8"	"426.3"	""	"838"	"25"	"36.000"	"29.000"	"0.138106469402355"	"16"	"0.0001889"	"0.0003827"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNFLSPSLSR"	"[M].vLNFLSPSLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"731.43573"	"1461.86418"	"1461.86268"	"1.03"	"0.00075"	"7/104"	"7"	"104"	"2909521.17895508"	"HCD"	"MS2"	"35.59516"	"148.9"	"100.000"	"65.2381"	"21039"	"21039"	"21017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.3"	""	"204.3"	""	"231.8"	""	"254.6"	""	"270.6"	"286.2"	""	"834"	"36"	"36.000"	"29.000"	"0.00970814054446308"	"20"	"0.0001859"	"0.0003689"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWIDILTK"	"[K].dWIDILTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QYJ2"	"Ras GTPase-activating protein 3 OS=Rattus norvegicus OX=10116 GN=Rasa3 PE=1 SV=2"	"Q9QYJ2"	"Ras GTPase-activating protein 3 OS=Rattus norvegicus OX=10116 GN=Rasa3 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"731.43890"	"1461.87053"	"1461.87174"	"-0.83"	"-0.00060"	"6/68"	"6"	"68"	"780213.210388184"	"HCD"	"MS2"	"22.87144"	"62.8"	"100.000"	"75.1521"	"25130"	"25130"	"25103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.9"	""	"80.5"	""	"82.7"	""	"103.3"	""	"109.5"	"127.2"	""	"760"	"47"	"35.000"	"28.000"	"0.000850714032655969"	"25"	"0"	"0.0001127"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWIDILTK"	"[K].dWIDILTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QYJ2"	"Ras GTPase-activating protein 3 OS=Rattus norvegicus OX=10116 GN=Rasa3 PE=1 SV=2"	"Q9QYJ2"	"Ras GTPase-activating protein 3 OS=Rattus norvegicus OX=10116 GN=Rasa3 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"731.43909"	"1461.87090"	"1461.87174"	"-0.57"	"-0.00042"	"7/68"	"7"	"68"	"753593.886535645"	"HCD"	"MS2"	"6.257905"	"63.0"	"100.000"	"75.1572"	"25080"	"25080"	"25057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.6"	""	"80.6"	""	"87.9"	""	"96.1"	""	"123.8"	"127.4"	""	"756"	"42"	"35.000"	"28.000"	"0.00243495982364737"	"24"	"0"	"0.0001244"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIMVGSGGVGK"	"[K].vIMVGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P36860"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1"	"P36860; P63322"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1; Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"3"	"3"	"0.6905"	"0.0000"	"1"	"1"	"1"	"487.96609"	"1461.88373"	"1461.88634"	"-1.79"	"-0.00087"	"8/80"	"8"	"80"	"11362592.1972046"	"HCD"	"MS2"	"24.75104"	"366.4"	"79.955"	"42.4505"	"11819"	"11819"	"11795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"384.9"	""	"497.0"	""	"510.1"	""	"589.1"	""	"723.0"	"779.3"	""	"684"	"42"	"35.000"	"28.000"	"0.00209423833969872"	""	"0"	"0.0001217"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSILESLDK"	"[K].vSILESLDk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"731.44562"	"1461.88396"	"1461.89287"	"-6.09"	"-0.00445"	"13/76"	"13"	"76"	"2982783.82891846"	"HCD"	"MS2"	"53.63336"	"260.0"	"100.000"	"59.9978"	"18952"	"18952"	"18932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"283.4"	""	"299.7"	""	"337.5"	""	"430.9"	""	"547.5"	"575.7"	""	"684"	"35"	"35.000"	"28.000"	"0.00968336062563387"	"23"	"0.0001889"	"0.0004514"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIMVGSGGVGK"	"[K].vIMVGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P36860"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1"	"P36860; P63322"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1; Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"731.44635"	"1461.88542"	"1461.88634"	"-0.63"	"-0.00046"	"10/80"	"10"	"80"	"11609699.0756226"	"HCD"	"MS2"	"30.16716"	"690.2"	"100.000"	"42.1385"	"11647"	"11647"	"11631"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"825.1"	""	"1090.3"	""	"1039.3"	""	"927.9"	""	"1291.3"	"1376.2"	""	"667"	"48"	"35.000"	"28.000"	"0.000505936297547689"	"28"	"0"	"3.832E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVWIPYPK"	"[K].tVWIPYPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"731.44653"	"1461.88579"	"1461.88699"	"-0.82"	"-0.00060"	"7/56"	"7"	"56"	"7227061.16259766"	"HCD"	"MS2"	"6.777956"	"369.3"	"100.000"	"56.8158"	"17603"	"17603"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"342.5"	""	"421.5"	""	"371.0"	""	"702.9"	""	"791.8"	"889.4"	""	"618"	"37"	"34.000"	"27.000"	"0.00623675206377602"	"23"	"0.0001889"	"0.0009706"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIMVGSGGVGK"	"[K].vIMVGSGGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P36860"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1"	"P36860; P63322"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1; Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"731.44678"	"1461.88628"	"1461.88634"	"-0.04"	"-0.00003"	"10/80"	"10"	"80"	"10659371.5593872"	"HCD"	"MS2"	"25.11905"	"645.8"	"100.000"	"42.3588"	"11781"	"11781"	"11767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"836.2"	""	"998.5"	""	"970.7"	""	"838.4"	"3.4"	"1222.4"	"1251.9"	""	"646"	"48"	"35.000"	"28.000"	"0.000493403836810897"	"28"	"0"	"3.067E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVWIPYPK"	"[K].tVWIPYPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"487.96704"	"1461.88657"	"1461.88699"	"-0.29"	"-0.00014"	"7/56"	"7"	"56"	"14160855.1383057"	"HCD"	"MS2"	"9.383623"	"285.0"	"100.000"	"57.0557"	"17755"	"17755"	"17733"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"249.5"	""	"340.9"	""	"287.2"	""	"549.2"	""	"623.9"	"665.4"	""	"644"	"16"	"35.000"	"28.000"	"0.827667442051574"	"22"	"0.0003839"	"0.002004"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVWIPYPK"	"[K].tVWIPYPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"487.96710"	"1461.88675"	"1461.88699"	"-0.16"	"-0.00008"	"7/56"	"7"	"56"	"4205897.86547852"	"HCD"	"MS2"	"10.07323"	"117.7"	"100.000"	"57.1952"	"17758"	"17758"	"17739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.8"	""	"133.9"	""	"122.9"	""	"205.6"	""	"277.2"	"279.7"	""	"644"	"17"	"35.000"	"28.000"	"0.701222546697716"	"21"	"0.000523"	"0.002812"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVWIPYPK"	"[K].tVWIPYPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"487.96713"	"1461.88684"	"1461.88699"	"-0.10"	"-0.00005"	"7/56"	"7"	"56"	"5539948.1206665"	"HCD"	"MS2"	"7.579474"	"135.5"	"100.000"	"57.3668"	"17882"	"17882"	"17861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.7"	""	"152.4"	""	"142.7"	""	"240.9"	""	"302.0"	"342.5"	""	"643"	"14"	"35.000"	"28.000"	"1.22795083075075"	"17"	"0.0004166"	"0.002347"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVWIPYPK"	"[K].tVWIPYPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"487.96719"	"1461.88703"	"1461.88699"	"0.02"	"0.00001"	"7/56"	"7"	"56"	"17148338.2392578"	"HCD"	"MS2"	"7.955145"	"356.9"	"100.000"	"56.8871"	"17632"	"17632"	"17611"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.3"	""	"392.3"	""	"341.6"	""	"689.9"	"2.9"	"815.7"	"879.0"	""	"631"	"14"	"34.000"	"28.000"	"1.16680790720674"	"17"	"0.0003839"	"0.001902"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVWIPYPK"	"[K].tVWIPYPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"731.44733"	"1461.88738"	"1461.88699"	"0.26"	"0.00019"	"7/56"	"7"	"56"	"5546472.73565674"	"HCD"	"MS2"	"7.478886"	"288.4"	"100.000"	"57.3552"	"17878"	"17878"	"17861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.0"	""	"344.9"	""	"310.4"	""	"503.0"	"4.8"	"603.9"	"699.3"	""	"627"	"38"	"34.000"	"27.000"	"0.00487795225508191"	"25"	"0.0003839"	"0.001597"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVWIPYPK"	"[K].tVWIPYPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"731.44733"	"1461.88738"	"1461.88699"	"0.26"	"0.00019"	"12/56"	"12"	"56"	"11422872.7077637"	"HCD"	"MS2"	"0"	"539.8"	"100.000"	"57.0534"	"17754"	"17754"	"17733"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"465.5"	""	"645.6"	""	"530.9"	""	"1037.0"	"7.8"	"1181.5"	"1270.2"	""	"627"	"32"	"34.000"	"27.000"	"0.0206651016159095"	"21"	"0.0004166"	"0.002184"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVWIPYPK"	"[K].tVWIPYPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"731.44745"	"1461.88762"	"1461.88699"	"0.43"	"0.00031"	"12/56"	"12"	"56"	"8742437.22644043"	"HCD"	"MS2"	"0.9311268"	"426.5"	"100.000"	"57.1101"	"17724"	"17724"	"17707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"368.8"	""	"445.6"	""	"432.2"	""	"783.6"	""	"966.7"	"1069.0"	""	"627"	"32"	"34.000"	"27.000"	"0.020904392214847"	"24"	"0.0003839"	"0.001935"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSILESLDK"	"[K].vSILESLDk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"731.44873"	"1461.89018"	"1461.89287"	"-1.83"	"-0.00134"	"14/76"	"14"	"76"	"2057810.21520996"	"HCD"	"MS2"	"34.48468"	"184.3"	"100.000"	"59.9102"	"18863"	"18863"	"18841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.6"	""	"203.7"	""	"236.2"	""	"310.3"	"2.9"	"418.0"	"394.6"	""	"624"	"39"	"34.000"	"27.000"	"0.00385615599234687"	"25"	"0"	"0.0001594"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILAVLTMK"	"[R].dILAVLTMk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYB4"	"Heat shock 70 kDa protein 14 OS=Rattus norvegicus OX=10116 GN=Hspa14 PE=2 SV=1"	"Q6AYB4"	"Heat shock 70 kDa protein 14 OS=Rattus norvegicus OX=10116 GN=Hspa14 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.45868"	"1461.91008"	"1461.91149"	"-0.97"	"-0.00071"	"6/76"	"6"	"76"	"356383.390014648"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"77.4739"	"26066"	"26066"	"26037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.5"	""	"27.6"	""	"31.5"	""	"32.6"	""	"40.5"	"51.9"	""	"422"	"11"	"33.000"	"26.000"	"1.68765027806483"	"13"	"0.00103"	"0.01138"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLNPVLLPPK"	"[M].sLLNPVLLPPk.[V]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"O89040"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 OS=Rattus norvegicus OX=10116 GN=Plcb2 PE=2 SV=1"	"O89040"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 OS=Rattus norvegicus OX=10116 GN=Plcb2 PE=2 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"731.46570"	"1461.92412"	"1461.92422"	"-0.07"	"-0.00005"	"9/94"	"9"	"94"	"280506.878723145"	"HCD"	"MS2"	"12.6903"	"12.5"	"100.000"	"82.2315"	"28006"	"28006"	"27982"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.8"	""	"14.4"	""	"23.1"	""	"19.6"	""	"21.1"	"22.1"	""	"329"	"22"	"32.000"	"25.000"	"0.106946334061438"	"15"	"0.00119"	"0.01554"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLNPVLLPPK"	"[M].sLLNPVLLPPk.[V]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"O89040"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 OS=Rattus norvegicus OX=10116 GN=Plcb2 PE=2 SV=1"	"O89040"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 OS=Rattus norvegicus OX=10116 GN=Plcb2 PE=2 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"731.46570"	"1461.92412"	"1461.92422"	"-0.07"	"-0.00005"	"5/94"	"5"	"94"	"303254.783874512"	"HCD"	"MS2"	"10.86124"	"12.3"	"100.000"	"82.2525"	"27964"	"27964"	"27936"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.9"	""	"16.9"	""	"23.2"	""	"21.0"	""	"14.8"	"23.4"	""	"329"	"26"	"32.000"	"25.000"	"0.0459373461883542"	"16"	"0.0008125"	"0.007762"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSEVAK"	"[K].kLSEVAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"1"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"487.99118"	"1461.95899"	"1461.96078"	"-1.22"	"-0.00060"	"6/62"	"6"	"62"	"25190244.1990967"	"HCD"	"MS2"	"39.02126"	"1012.1"	"59.711"	"30.7982"	"7059"	"7059"	"7040"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1494.2"	""	"1449.4"	""	"1456.0"	""	"1620.1"	"36.4"	"1750.3"	"1773.8"	""	"152"	"13"	"28.000"	"21.000"	"0.405334520570592"	"16"	"0.001718"	"0.02357"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSEVAK"	"[K].kLSEVAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"1"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"731.48328"	"1461.95928"	"1461.96078"	"-1.03"	"-0.00075"	"6/62"	"6"	"62"	"582996.372741699"	"HCD"	"MS2"	"0"	"44.2"	"100.000"	"30.7110"	"6983"	"6983"	"6952"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.5"	""	"62.2"	""	"68.1"	""	"67.7"	""	"75.0"	"70.4"	""	"152"	"26"	"28.000"	"21.000"	"0.0177751630138111"	""	"0.000494"	"0.002671"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSVYMTK"	"[K].eFSVYMTk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"731.90375"	"1462.80022"	"1462.80161"	"-0.95"	"-0.00070"	"7/68"	"7"	"68"	"5426014.92547607"	"HCD"	"MS2"	"8.001172"	"464.4"	"100.000"	"47.5706"	"13853"	"13853"	"13832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"823.9"	""	"773.4"	""	"762.2"	""	"591.7"	""	"657.0"	"775.7"	""	"981"	"41"	"36.000"	"29.000"	"0.00348850228446958"	"22"	"0.0001889"	"0.0007617"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSVYMTK"	"[K].eFSVYMTk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"731.90472"	"1462.80217"	"1462.80161"	"0.38"	"0.00028"	"14/68"	"14"	"68"	"6239992.2121582"	"HCD"	"MS2"	"6.105351"	"505.9"	"100.000"	"47.8755"	"14026"	"14026"	"14002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"908.1"	""	"825.8"	""	"851.9"	""	"664.6"	"0.3"	"690.2"	"832.7"	""	"994"	"45"	"36.000"	"29.000"	"0.00150784391854455"	"22"	"0.0001889"	"0.0007765"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFGVEPDLTR"	"[K].tVFGVEPDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"731.90894"	"1462.81059"	"1462.81031"	"0.19"	"0.00014"	"6/98"	"6"	"98"	"2321668.26531982"	"HCD"	"MS2"	"14.85679"	"147.6"	"100.000"	"49.1731"	"14557"	"14557"	"14527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.2"	""	"193.0"	""	"216.9"	""	"275.3"	"4.0"	"258.5"	"245.0"	""	"959"	"30"	"36.000"	"29.000"	"0.0474011208888002"	"17"	"0"	"0.0001464"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFGVEPDLTR"	"[K].tVFGVEPDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"731.91144"	"1462.81560"	"1462.81031"	"3.62"	"0.00264"	"6/98"	"6"	"98"	"2162994.18151855"	"HCD"	"MS2"	"39.29091"	"149.4"	"100.000"	"48.8542"	"14379"	"14379"	"14351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"190.8"	""	"205.0"	""	"201.7"	""	"273.0"	"6.6"	"289.2"	"249.9"	""	"951"	"27"	"36.000"	"29.000"	"0.094004906387319"	"18"	"0.0001308"	"0.0002672"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGVTTLDIVR"	"[K].iFGVTTLDIVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"488.29822"	"1462.88010"	"1462.88308"	"-2.04"	"-0.00099"	"11/86"	"11"	"86"	"3752840.82128906"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"69.8395"	"22910"	"22910"	"22885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.2"	""	"49.4"	""	"52.3"	""	"57.0"	""	"60.8"	"71.2"	""	"709"	"44"	"35.000"	"28.000"	"0.0015332615310191"	"20"	"0.0001308"	"0.0002388"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGVTTLDIVR"	"[K].iFGVTTLDIVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"488.29846"	"1462.88083"	"1462.88308"	"-1.54"	"-0.00075"	"12/86"	"12"	"86"	"3920783.1348877"	"HCD"	"MS2"	"38.55869"	"36.4"	"100.000"	"69.6674"	"22891"	"22891"	"22873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.6"	""	"42.9"	""	"61.9"	""	"65.0"	""	"59.6"	"72.2"	""	"700"	"51"	"35.000"	"28.000"	"0.000291117319885935"	"19"	"0"	"0.0001189"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGVTTLDIVR"	"[K].iFGVTTLDIVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.94440"	"1462.88152"	"1462.88308"	"-1.07"	"-0.00078"	"18/86"	"18"	"86"	"3008809.34057617"	"HCD"	"MS2"	"4.668676"	"136.1"	"100.000"	"70.0574"	"22998"	"22998"	"22979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.4"	""	"182.3"	""	"199.3"	""	"225.9"	""	"223.7"	"275.5"	""	"640"	"66"	"35.000"	"28.000"	"8.91558773961526E-06"	"17"	"0"	"3.124E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGVTTLDIVR"	"[K].iFGVTTLDIVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"731.94446"	"1462.88164"	"1462.88308"	"-0.99"	"-0.00072"	"10/86"	"10"	"86"	"6621880.31616211"	"HCD"	"MS2"	"0"	"269.9"	"100.000"	"69.5918"	"22860"	"22860"	"22842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"369.7"	""	"387.1"	""	"429.6"	""	"426.9"	""	"439.6"	"505.1"	""	"640"	"60"	"35.000"	"28.000"	"3.40525765831781E-05"	"22"	"0"	"5.014E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGVTTLDIVR"	"[K].iFGVTTLDIVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"731.94464"	"1462.88201"	"1462.88308"	"-0.74"	"-0.00054"	"10/86"	"10"	"86"	"7183796.96765137"	"HCD"	"MS2"	"0"	"292.3"	"100.000"	"69.8624"	"22971"	"22971"	"22959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"392.8"	""	"383.5"	""	"447.7"	""	"466.3"	"1.0"	"488.5"	"588.5"	""	"638"	"60"	"35.000"	"28.000"	"3.28693172420876E-05"	"22"	"0"	"4.754E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGVTTLDIVR"	"[K].iFGVTTLDIVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"731.94489"	"1462.88249"	"1462.88308"	"-0.40"	"-0.00029"	"7/86"	"7"	"86"	"546605.426269531"	"HCD"	"MS2"	"29.28703"	"35.3"	"100.000"	"70.1852"	"23102"	"23102"	"23082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.5"	""	"45.9"	""	"59.3"	""	"53.2"	"1.4"	"60.6"	"61.0"	""	"626"	"27"	"34.000"	"27.000"	"0.068793014018165"	"16"	"7.476E-05"	"0.000187"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFGVTTLDIVR"	"[K].iFGVTTLDIVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"731.94489"	"1462.88249"	"1462.88308"	"-0.40"	"-0.00029"	"10/86"	"10"	"86"	"8580169.38574219"	"HCD"	"MS2"	"0"	"343.1"	"100.000"	"69.7411"	"22870"	"22870"	"22858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"503.4"	""	"457.9"	""	"510.7"	""	"541.2"	"1.1"	"578.3"	"655.4"	""	"626"	"57"	"34.000"	"27.000"	"6.6304703533278E-05"	"22"	"0"	"4.339E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPITQYLK"	"[K].aAPITQYLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"488.30524"	"1462.90116"	"1462.90337"	"-1.51"	"-0.00074"	"7/70"	"7"	"70"	"7858434.50769043"	"HCD"	"MS2"	"16.55834"	"254.3"	"100.000"	"47.0710"	"13649"	"13649"	"13624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"490.4"	""	"431.6"	""	"372.1"	""	"360.6"	""	"395.4"	"350.6"	""	"478"	"38"	"33.000"	"26.000"	"0.00390299415546746"	"17"	"0.0001889"	"0.0006283"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPITQYLK"	"[K].aAPITQYLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"488.30530"	"1462.90134"	"1462.90337"	"-1.39"	"-0.00068"	"10/70"	"10"	"70"	"8370786.39776611"	"HCD"	"MS2"	"17.74569"	"272.2"	"100.000"	"47.3415"	"13808"	"13808"	"13778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"520.5"	""	"486.7"	""	"402.4"	""	"362.7"	"3.4"	"401.0"	"392.3"	""	"478"	"35"	"33.000"	"26.000"	"0.00733496255225486"	"17"	"0.0001889"	"0.0004039"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPITQYLK"	"[K].aAPITQYLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.95520"	"1462.90312"	"1462.90337"	"-0.17"	"-0.00012"	"14/70"	"14"	"70"	"7949360.73028564"	"HCD"	"MS2"	"5.390925"	"537.8"	"100.000"	"47.0156"	"13626"	"13626"	"13608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"996.3"	""	"969.6"	""	"752.3"	""	"780.2"	"1.6"	"824.1"	"752.2"	""	"496"	"47"	"33.000"	"26.000"	"0.000519339889051022"	"16"	"0.0001859"	"0.0003352"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPITQYLK"	"[K].aAPITQYLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"731.95593"	"1462.90459"	"1462.90337"	"0.83"	"0.00061"	"7/70"	"7"	"70"	"1701993.41760254"	"HCD"	"MS2"	"12.98765"	"141.2"	"100.000"	"47.3341"	"13756"	"13756"	"13736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.7"	""	"216.5"	""	"201.0"	""	"199.5"	"1.9"	"250.9"	"235.9"	""	"470"	"38"	"33.000"	"26.000"	"0.00397253618936167"	"20"	"7.476E-05"	"0.0001898"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPITQYLK"	"[K].aAPITQYLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.95618"	"1462.90508"	"1462.90337"	"1.17"	"0.00085"	"14/70"	"14"	"70"	"8082243.53845215"	"HCD"	"MS2"	"13.75831"	"533.4"	"100.000"	"47.2863"	"13785"	"13785"	"13762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1048.6"	""	"939.2"	""	"735.2"	""	"729.3"	"6.2"	"819.1"	"756.4"	""	"469"	"47"	"33.000"	"26.000"	"0.000493336044125238"	"15"	"0.0001308"	"0.000255"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYSIASSSK"	"[R].yYSIASSSk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"732.41046"	"1463.81365"	"1463.81462"	"-0.66"	"-0.00049"	"8/74"	"8"	"74"	"3666452.65167236"	"HCD"	"MS2"	"20.40632"	"306.6"	"100.000"	"36.2831"	"9252"	"9252"	"9226"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.5"	""	"482.7"	""	"485.8"	""	"438.3"	""	"538.3"	"588.3"	""	"1052"	"40"	"37.000"	"30.000"	"0.00494294461357"	"18"	"0.0001308"	"0.000214"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYSIASSSK"	"[R].yYSIASSSk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"732.41217"	"1463.81706"	"1463.81462"	"1.67"	"0.00122"	"8/74"	"8"	"74"	"3622228.5234375"	"HCD"	"MS2"	"27.01831"	"299.9"	"100.000"	"36.3678"	"9330"	"9330"	"9305"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"365.4"	""	"451.2"	""	"475.0"	""	"439.4"	"1.5"	"538.1"	"570.6"	""	"1053"	"39"	"37.000"	"30.000"	"0.00643277521076805"	"17"	"7.476E-05"	"0.0001953"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNINPSDK"	"[R].aFNINPSDk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"732.41663"	"1463.82598"	"1463.82585"	"0.09"	"0.00006"	"8/78"	"8"	"78"	"5923474.42602539"	"HCD"	"MS2"	"0"	"439.0"	"100.000"	"40.1827"	"10849"	"10849"	"10821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"465.1"	""	"460.7"	""	"507.5"	""	"859.6"	""	"923.5"	"958.9"	""	"1043"	"45"	"37.000"	"30.000"	"0.00161158906805584"	"28"	"0.0001308"	"0.000257"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNINPSDK"	"[R].aFNINPSDk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"732.41748"	"1463.82768"	"1463.82585"	"1.25"	"0.00092"	"8/78"	"8"	"78"	"4241128.03118896"	"HCD"	"MS2"	"0"	"312.9"	"100.000"	"40.2899"	"10937"	"10937"	"10909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.6"	""	"335.2"	""	"372.2"	""	"595.8"	""	"623.1"	"707.1"	""	"1014"	"41"	"37.000"	"30.000"	"0.00368135720419623"	"25"	"0.0001308"	"0.000216"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGNMGLAMK"	"[K].iAGNMGLAMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"732.42657"	"1463.84587"	"1463.84785"	"-1.35"	"-0.00099"	"9/86"	"9"	"86"	"3463758.47033691"	"HCD"	"MS2"	"0"	"278.0"	"100.000"	"47.0630"	"13694"	"13694"	"13666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"428.4"	""	"372.3"	""	"297.0"	""	"370.2"	""	"575.9"	"598.8"	""	"878"	"50"	"36.000"	"29.000"	"0.000481353928106858"	"22"	"0"	"3.996E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGNMGLAMK"	"[K].iAGNMGLAMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"488.62048"	"1463.84690"	"1463.84785"	"-0.65"	"-0.00032"	"7/86"	"7"	"86"	"3174892.753479"	"HCD"	"MS2"	"47.25746"	"121.4"	"100.000"	"46.9279"	"13591"	"13591"	"13560"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.6"	""	"168.9"	""	"166.7"	""	"173.5"	""	"226.2"	"219.6"	""	"836"	"27"	"36.000"	"29.000"	"0.0887516185116091"	"23"	"0"	"0.000171"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGNMGLAMK"	"[K].iAGNMGLAMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"732.42828"	"1463.84929"	"1463.84785"	"0.99"	"0.00072"	"9/86"	"9"	"86"	"3414736.18597412"	"HCD"	"MS2"	"0"	"271.1"	"100.000"	"46.7970"	"13537"	"13537"	"13512"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"403.7"	""	"365.1"	""	"284.8"	""	"354.6"	"2.2"	"575.7"	"588.9"	""	"893"	"64"	"36.000"	"29.000"	"1.74510459971307E-05"	"23"	"0"	"2.989E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITDVALDFWR"	"[R].iTDVALDFWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68G38"	"Torsin-1A OS=Rattus norvegicus OX=10116 GN=Tor1a PE=1 SV=1"	"Q68G38"	"Torsin-1A OS=Rattus norvegicus OX=10116 GN=Tor1a PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"732.90479"	"1464.80229"	"1464.80483"	"-1.73"	"-0.00127"	"9/82"	"9"	"82"	"1087097.08868408"	"HCD"	"MS2"	"0"	"66.3"	"100.000"	"76.7555"	"25773"	"25773"	"25761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.5"	""	"93.5"	""	"89.9"	""	"106.8"	"0.4"	"109.5"	"117.8"	""	"1053"	"21"	"37.000"	"30.000"	"0.392101384261503"	"19"	"0.0001889"	"0.0008415"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITDVALDFWR"	"[R].iTDVALDFWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68G38"	"Torsin-1A OS=Rattus norvegicus OX=10116 GN=Tor1a PE=1 SV=1"	"Q68G38"	"Torsin-1A OS=Rattus norvegicus OX=10116 GN=Tor1a PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"732.90546"	"1464.80364"	"1464.80483"	"-0.82"	"-0.00060"	"7/82"	"7"	"82"	"943958.399169922"	"HCD"	"MS2"	"29.66567"	"58.2"	"100.000"	"76.8144"	"25746"	"25746"	"25736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.6"	""	"83.5"	""	"89.1"	""	"83.5"	""	"95.4"	"96.9"	""	"1042"	"22"	"37.000"	"30.000"	"0.330246119564859"	"20"	"0.0001308"	"0.0003132"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLLNSFMQLR"	"[R].gGLLNSFMQLR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.9839"	"0.0000"	"1"	"1"	"1"	"732.91284"	"1464.81841"	"1464.81944"	"-0.70"	"-0.00051"	"9/92"	"9"	"92"	"3928968.2041626"	"HCD"	"MS2"	"14.55404"	"207.4"	"100.000"	"66.5930"	"21645"	"21645"	"21619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"338.3"	""	"329.7"	""	"321.4"	""	"248.9"	"2.5"	"314.5"	"406.1"	""	"1023"	"62"	"37.000"	"30.000"	"3.07500366722697E-05"	"17"	"0"	"2.881E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLLNSFMQLR"	"[R].gGLLNSFMQLR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.91327"	"1464.81926"	"1464.81944"	"-0.12"	"-0.00009"	"9/92"	"9"	"92"	"2167004.04949951"	"HCD"	"MS2"	"13.61679"	"130.7"	"100.000"	"66.8904"	"21766"	"21766"	"21747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.5"	""	"181.0"	""	"205.5"	""	"190.9"	"3.0"	"213.1"	"256.5"	""	"1009"	"47"	"37.000"	"30.000"	"0.0010348113192175"	"15"	"0"	"6.163E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLLNSFMQLR"	"[R].gGLLNSFMQLR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.91437"	"1464.82146"	"1464.81944"	"1.38"	"0.00101"	"9/92"	"9"	"92"	"3928512.29797363"	"HCD"	"MS2"	"5.715413"	"219.1"	"100.000"	"66.6813"	"21628"	"21628"	"21609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.7"	""	"361.6"	""	"351.6"	""	"238.3"	""	"342.2"	"415.3"	""	"1016"	"62"	"37.000"	"30.000"	"3.29506292242505E-05"	"16"	"0"	"1.478E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FGGGSVELLK"	"[R].fGGGSVELLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"732.94421"	"1464.88115"	"1464.88264"	"-1.01"	"-0.00074"	"8/76"	"8"	"76"	"2166950.7699585"	"HCD"	"MS2"	"50.79409"	"146.9"	"100.000"	"52.1373"	"15712"	"15712"	"15682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.3"	""	"176.2"	""	"174.3"	""	"294.0"	"1.0"	"276.8"	"290.9"	""	"566"	"5"	"34.000"	"27.000"	"8.5464633687377"	"16"	"0.001454"	"0.02017"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGGSVELLK"	"[R].fGGGSVELLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"732.94452"	"1464.88176"	"1464.88264"	"-0.60"	"-0.00044"	"9/76"	"9"	"76"	"4811087.94842529"	"HCD"	"MS2"	"27.64253"	"385.0"	"100.000"	"51.8220"	"15583"	"15583"	"15554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"580.1"	""	"555.4"	""	"521.9"	""	"677.7"	"1.3"	"641.3"	"665.6"	""	"558"	"38"	"34.000"	"27.000"	"0.00399580423897319"	""	"0"	"0.0001082"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGGSVELLK"	"[R].fGGGSVELLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"732.94476"	"1464.88225"	"1464.88264"	"-0.26"	"-0.00019"	"9/76"	"9"	"76"	"4311844.57696533"	"HCD"	"MS2"	"22.53083"	"358.0"	"100.000"	"52.0154"	"15712"	"15712"	"15686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"534.8"	""	"520.3"	""	"498.1"	""	"593.3"	""	"592.3"	"651.1"	""	"560"	"39"	"34.000"	"27.000"	"0.00345269353304094"	"23"	"0"	"9.66E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FGGGSVELLK"	"[R].fGGGSVELLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"732.94482"	"1464.88237"	"1464.88264"	"-0.18"	"-0.00013"	"11/76"	"11"	"76"	"2330555.35583496"	"HCD"	"MS2"	"53.75882"	"154.2"	"100.000"	"52.3263"	"15839"	"15839"	"15814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.7"	""	"194.1"	""	"186.3"	""	"303.9"	"0.2"	"300.0"	"278.0"	""	"560"	"5"	"34.000"	"27.000"	"8.03818562966913"	"18"	"0.0006037"	"0.005071"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTMLNTVSK"	"[K].lTMLNTVSk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"732.94543"	"1464.88359"	"1464.88601"	"-1.65"	"-0.00121"	"8/84"	"8"	"84"	"2455404.75439453"	"HCD"	"MS2"	"15.64066"	"217.4"	"100.000"	"47.8600"	"13972"	"13972"	"13944"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.5"	""	"283.3"	""	"287.8"	""	"303.5"	""	"418.1"	"441.0"	""	"545"	"31"	"34.000"	"27.000"	"0.0195598944371446"	""	"0.0001859"	"0.0003392"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTMLNTVSK"	"[K].lTMLNTVSk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"732.94562"	"1464.88396"	"1464.88601"	"-1.40"	"-0.00102"	"8/84"	"8"	"84"	"2826966.0703125"	"HCD"	"MS2"	"0"	"254.3"	"100.000"	"48.1235"	"14128"	"14128"	"14098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"370.8"	"2.3"	"324.6"	""	"341.6"	""	"358.1"	"3.0"	"496.8"	"514.9"	""	"537"	"33"	"34.000"	"27.000"	"0.0130600334728157"	""	"0.0001308"	"0.0003019"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILNYIATK"	"[RK].aILNYIATk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"4"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"488.97760"	"1464.91825"	"1464.91902"	"-0.53"	"-0.00026"	"10/74"	"10"	"74"	"8817324.51123047"	"HCD"	"MS2"	"25.17031"	"257.7"	"100.000"	"58.1212"	"18137"	"18137"	"18107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"385.9"	""	"366.0"	""	"417.5"	""	"448.3"	"2.1"	"385.3"	"430.5"	""	"290"	"39"	"31.000"	"24.000"	"0.00187226794673962"	""	"0.0001889"	"0.0005452"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILNYIATK"	"[RK].aILNYIATk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"4"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.96283"	"1464.91838"	"1464.91902"	"-0.44"	"-0.00032"	"13/74"	"13"	"74"	"2416502.99523926"	"HCD"	"MS2"	"49.84267"	"126.7"	"100.000"	"58.5345"	"18306"	"18306"	"18281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.1"	""	"149.6"	""	"179.3"	""	"208.0"	""	"240.1"	"257.8"	""	"290"	"9"	"31.000"	"24.000"	"1.65717358544517"	"13"	"0.0001859"	"0.0003462"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILNYIATK"	"[RK].aILNYIATk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"4"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"488.97791"	"1464.91916"	"1464.91902"	"0.10"	"0.00005"	"10/74"	"10"	"74"	"9832179.41491699"	"HCD"	"MS2"	"5.127584"	"278.9"	"100.000"	"58.3477"	"18283"	"18283"	"18261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"409.6"	""	"404.8"	""	"457.3"	""	"463.2"	""	"424.7"	"479.6"	""	"283"	"36"	"31.000"	"24.000"	"0.00377360501029789"	"24"	"0.0001889"	"0.0009285"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILNYIATK"	"[RK].aILNYIATk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"4"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"732.96332"	"1464.91936"	"1464.91902"	"0.23"	"0.00017"	"8/74"	"8"	"74"	"19637800.8605347"	"HCD"	"MS2"	"6.565823"	"1176.8"	"95.396"	"58.2948"	"18262"	"18262"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1808.9"	""	"1635.8"	""	"1926.0"	""	"1940.6"	"7.3"	"1752.9"	"2050.5"	""	"283"	"54"	"31.000"	"24.000"	"6.09195153845771E-05"	"22"	"0.0001889"	"0.0004715"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILNYIATK"	"[RK].aILNYIATk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"4"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"732.96350"	"1464.91973"	"1464.91902"	"0.48"	"0.00035"	"8/74"	"8"	"74"	"21743501.2194824"	"HCD"	"MS2"	"7.430634"	"944.4"	"71.407"	"58.1282"	"18140"	"18140"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1414.2"	""	"1286.1"	""	"1590.7"	""	"1585.9"	"1.1"	"1393.0"	"1654.2"	""	"285"	"54"	"31.000"	"24.000"	"6.07875814292269E-05"	"22"	"0.0001889"	"0.0003878"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GGLLNSFMQLR"	"[R].gGLLnSFMQLR.[E]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"2"	"2"	"733.40503"	"1465.80278"	"1465.80345"	"-0.46"	"-0.00033"	"4/92"	"4"	"92"	"1826707.13830566"	"HCD"	"MS2"	"23.40634"	"105.7"	"100.000"	"68.7525"	"22466"	"22466"	"22442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.9"	""	"153.0"	""	"155.8"	""	"147.0"	"0.5"	"177.1"	"197.6"	""	"978"	"5"	"36.000"	"29.000"	"14.632174073014"	"13"	"0.006814"	"0.253"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNAFGNAFLNR"	"[K].lNAFGNAFLNR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"489.27518"	"1465.81098"	"1465.81131"	"-0.23"	"-0.00011"	"14/100"	"14"	"100"	"9898205.18981934"	"HCD"	"MS2"	"6.143661"	"72.1"	"100.000"	"57.6755"	"18008"	"18008"	"17989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.4"	""	"100.4"	""	"114.7"	""	"107.5"	""	"122.5"	"131.5"	""	"949"	"53"	"36.000"	"29.000"	"0.000250170569245129"	"19"	"0.0001308"	"0.0002556"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNAFGNAFLNR"	"[K].lNAFGNAFLNR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"489.27533"	"1465.81144"	"1465.81131"	"0.08"	"0.00004"	"14/100"	"14"	"100"	"9044320.94799805"	"HCD"	"MS2"	"10.30639"	"69.2"	"100.000"	"57.4695"	"17870"	"17870"	"17851"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.6"	""	"84.6"	""	"101.0"	""	"104.4"	"1.9"	"124.1"	"143.4"	""	"948"	"53"	"36.000"	"29.000"	"0.000231088504309005"	"19"	"0"	"0.0001042"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNAFGNAFLNR"	"[K].lNAFGNAFLNR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.40973"	"1465.81218"	"1465.81131"	"0.59"	"0.00043"	"7/100"	"7"	"100"	"2939557.07788086"	"HCD"	"MS2"	"31.60142"	"152.7"	"100.000"	"57.7092"	"17968"	"17968"	"17947"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.9"	""	"184.3"	""	"212.0"	""	"244.3"	""	"297.5"	"307.3"	""	"961"	"31"	"36.000"	"29.000"	"0.0357020695759365"	"14"	"0"	"6.405E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNAFGNAFLNR"	"[K].lNAFGNAFLNR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.41003"	"1465.81279"	"1465.81131"	"1.01"	"0.00074"	"8/100"	"8"	"100"	"7902304.13000488"	"HCD"	"MS2"	"36.5315"	"372.0"	"100.000"	"57.3939"	"17839"	"17839"	"17819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"548.7"	""	"475.5"	""	"518.6"	""	"622.8"	""	"667.8"	"690.3"	""	"963"	"49"	"36.000"	"29.000"	"0.000637670449196231"	"16"	"0"	"3.249E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHALGPIYYR"	"[R].fHALGPIYYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXT5"	"Ras-related protein Rab-21 OS=Rattus norvegicus OX=10116 GN=Rab21 PE=2 SV=1"	"Q6AXT5"	"Ras-related protein Rab-21 OS=Rattus norvegicus OX=10116 GN=Rab21 PE=2 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"489.27585"	"1465.81299"	"1465.81534"	"-1.60"	"-0.00078"	"8/74"	"8"	"74"	"13939089.0257568"	"HCD"	"MS2"	"9.887958"	"124.4"	"100.000"	"40.8457"	"11121"	"11121"	"11093"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.4"	""	"184.5"	""	"184.8"	""	"205.4"	"3.9"	"229.4"	"211.5"	""	"963"	"52"	"36.000"	"29.000"	"0.000305911843686615"	"24"	"0"	"3.824E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNAFGNAFLNR"	"[K].lNAFGNAFLNR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.41040"	"1465.81352"	"1465.81131"	"1.51"	"0.00111"	"8/100"	"8"	"100"	"9379194.86462402"	"HCD"	"MS2"	"23.16569"	"411.0"	"100.000"	"57.5972"	"17976"	"17976"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"594.4"	""	"508.6"	""	"600.8"	""	"683.0"	"1.5"	"731.2"	"773.5"	""	"961"	"61"	"36.000"	"29.000"	"3.92367829437803E-05"	"17"	"0"	"3.757E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHALGPIYYR"	"[R].fHALGPIYYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXT5"	"Ras-related protein Rab-21 OS=Rattus norvegicus OX=10116 GN=Rab21 PE=2 SV=1"	"Q6AXT5"	"Ras-related protein Rab-21 OS=Rattus norvegicus OX=10116 GN=Rab21 PE=2 SV=1"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"489.27649"	"1465.81491"	"1465.81534"	"-0.29"	"-0.00014"	"8/74"	"8"	"74"	"13820886.918396"	"HCD"	"MS2"	"10.24833"	"126.3"	"100.000"	"41.0245"	"11238"	"11238"	"11213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.5"	""	"178.9"	""	"191.9"	""	"212.1"	"0.2"	"231.9"	"214.5"	""	"924"	"47"	"36.000"	"29.000"	"0.000848480714626936"	"26"	"0"	"9.144E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPLYLSTK"	"[K].wPLYLSTk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"733.44391"	"1465.88054"	"1465.88191"	"-0.93"	"-0.00068"	"7/58"	"7"	"58"	"9176088.58270264"	"HCD"	"MS2"	"7.642066"	"546.7"	"100.000"	"61.9554"	"19751"	"19751"	"19731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"888.8"	""	"830.0"	""	"882.8"	""	"740.7"	"1.8"	"875.8"	"948.8"	""	"571"	"38"	"34.000"	"27.000"	"0.00414577866821301"	"17"	"0.0001889"	"0.0008055"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPLYLSTK"	"[K].wPLYLSTk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"489.29846"	"1465.88083"	"1465.88191"	"-0.73"	"-0.00036"	"6/58"	"6"	"58"	"3623152.15008545"	"HCD"	"MS2"	"6.968624"	"114.9"	"100.000"	"62.0449"	"19788"	"19788"	"19763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.4"	""	"177.6"	""	"188.5"	""	"162.8"	"2.8"	"171.2"	"203.2"	""	"574"	"21"	"34.000"	"27.000"	"0.218213641481832"	"14"	"0.0001889"	"0.001096"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNILGTNTK"	"[K].fNILGTNTk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"733.44409"	"1465.88091"	"1465.87789"	"2.06"	"0.00151"	"8/82"	"8"	"82"	"1373778.85327148"	"HCD"	"MS2"	"26.08784"	"127.5"	"100.000"	"49.1304"	"14492"	"14492"	"14463"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.3"	""	"166.6"	""	"188.5"	""	"200.9"	""	"223.6"	"245.7"	""	"574"	"43"	"34.000"	"27.000"	"0.0015271507040957"	"21"	"7.476E-05"	"0.00019"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNILGTNTK"	"[K].fNILGTNTk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"733.44421"	"1465.88115"	"1465.87789"	"2.23"	"0.00163"	"7/82"	"7"	"82"	"1704617.14685059"	"HCD"	"MS2"	"27.90949"	"158.3"	"100.000"	"49.3641"	"14635"	"14635"	"14606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.6"	""	"229.9"	""	"240.2"	""	"239.1"	""	"261.1"	"281.4"	""	"574"	"38"	"34.000"	"27.000"	"0.00406332814847683"	"21"	"0.0001308"	"0.0002634"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPLYLSTK"	"[K].wPLYLSTk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"489.29865"	"1465.88138"	"1465.88191"	"-0.36"	"-0.00018"	"7/58"	"7"	"58"	"3705176.44696045"	"HCD"	"MS2"	"18.2642"	"116.8"	"100.000"	"61.8423"	"19652"	"19652"	"19625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.1"	""	"190.3"	""	"191.5"	""	"158.5"	""	"195.8"	"199.6"	""	"574"	"30"	"34.000"	"27.000"	"0.0322019296384664"	"20"	"0.0004166"	"0.002338"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPLYLSTK"	"[K].wPLYLSTk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"733.44501"	"1465.88274"	"1465.88191"	"0.57"	"0.00041"	"7/58"	"7"	"58"	"8387261.67346191"	"HCD"	"MS2"	"9.814344"	"507.9"	"100.000"	"61.7822"	"19627"	"19627"	"19609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"833.9"	""	"747.4"	""	"818.1"	""	"722.3"	"6.3"	"811.6"	"861.5"	""	"540"	"37"	"34.000"	"27.000"	"0.00601677490302981"	"18"	"0.0001889"	"0.000971"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILNYIATK"	"[RK].aILnYIATk.[Y]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"4"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"733.45288"	"1465.89849"	"1465.90304"	"-3.11"	"-0.00228"	"7/74"	"7"	"74"	"1380720.04241943"	"HCD"	"MS2"	"0"	"103.2"	"100.000"	"50.7684"	"15202"	"15202"	"15174"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.2"	""	"121.7"	""	"115.4"	""	"216.4"	"2.2"	"185.0"	"196.1"	""	"362"	"26"	"32.000"	"25.000"	"0.0412741915032076"	"17"	"0.0001308"	"0.0002779"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILNYIATK"	"[RK].aILnYIATk.[Y]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"4"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"733.45551"	"1465.90373"	"1465.90304"	"0.48"	"0.00035"	"10/74"	"10"	"74"	"575635.301513672"	"HCD"	"MS2"	"100"	"64.7"	"100.000"	"50.7288"	"15136"	"15136"	"15106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.8"	""	"71.6"	""	"86.6"	""	"124.1"	""	"119.2"	"121.1"	""	"339"	"31"	"32.000"	"25.000"	"0.0127693768052865"	"17"	"0.0001889"	"0.0004241"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFLEGDWK"	"[R].nFLEGDWk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPJ9"	"Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"Q5PPJ9"	"Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"733.90680"	"1466.80632"	"1466.80439"	"1.32"	"0.00097"	"7/74"	"7"	"74"	"1890129.10931396"	"HCD"	"MS2"	"28.28489"	"178.4"	"100.000"	"55.8442"	"17260"	"17260"	"17237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.1"	""	"250.8"	""	"257.8"	""	"275.8"	"2.3"	"325.7"	"322.2"	""	"874"	"33"	"36.000"	"29.000"	"0.0242930160427167"	"28"	"0.0001889"	"0.0004024"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPMAVGLNK"	"[R].yPmAVGLNk.[G]"	"N-Term(TMT6plex); M3(Oxidation); K9(TMT6plex)"	"1"	"1"	"P39032"	"60S ribosomal protein L36 OS=Rattus norvegicus OX=10116 GN=Rpl36 PE=1 SV=2"	"P39032"	"60S ribosomal protein L36 OS=Rattus norvegicus OX=10116 GN=Rpl36 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"733.92554"	"1466.84380"	"1466.84414"	"-0.24"	"-0.00017"	"8/68"	"8"	"68"	"1721054.53289795"	"HCD"	"MS2"	"0"	"111.9"	"100.000"	"38.6628"	"10229"	"10229"	"10198"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.2"	""	"194.9"	""	"161.5"	""	"218.4"	""	"167.3"	"167.7"	""	"845"	"30"	"36.000"	"29.000"	"0.0397033098713559"	"16"	"0.0006037"	"0.004862"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPMAVGLNK"	"[R].yPmAVGLNk.[G]"	"N-Term(TMT6plex); M3(Oxidation); K9(TMT6plex)"	"1"	"1"	"P39032"	"60S ribosomal protein L36 OS=Rattus norvegicus OX=10116 GN=Rpl36 PE=1 SV=2"	"P39032"	"60S ribosomal protein L36 OS=Rattus norvegicus OX=10116 GN=Rpl36 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.92566"	"1466.84404"	"1466.84414"	"-0.07"	"-0.00005"	"8/68"	"8"	"68"	"1931483.5246582"	"HCD"	"MS2"	"0"	"133.9"	"100.000"	"38.8380"	"10344"	"10344"	"10318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.4"	""	"211.5"	""	"211.8"	""	"229.1"	""	"186.4"	"224.9"	""	"846"	"36"	"36.000"	"29.000"	"0.0111516817620414"	"15"	"0.0001889"	"0.0008708"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IRDWYQK"	"[K].iRDWYQk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV3; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"733.92908"	"1466.85088"	"1466.85200"	"-0.77"	"-0.00056"	"6/58"	"6"	"58"	"2109686.68395996"	"HCD"	"MS2"	"0"	"161.5"	"100.000"	"36.5995"	"9382"	"9382"	"9354"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.5"	""	"242.8"	""	"255.9"	""	"224.1"	""	"231.1"	"295.7"	""	"785"	"15"	"35.000"	"28.000"	"1.32385268648606"	"21"	"0.001686"	"0.02327"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IRDWYQK"	"[K].iRDWYQk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV3; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"489.62189"	"1466.85111"	"1466.85200"	"-0.61"	"-0.00030"	"9/58"	"9"	"58"	"99628947.9318848"	"HCD"	"MS2"	"12.13371"	"741.3"	"15.683"	"36.6613"	"9450"	"9450"	"9431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1320.2"	""	"1092.9"	""	"1236.1"	""	"1001.3"	"3.8"	"976.6"	"1367.2"	""	"785"	"9"	"35.000"	"28.000"	"4.75159767418565"	"14"	"0.00252"	"0.03826"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IRDWYQK"	"[K].iRDWYQk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV3; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"489.62198"	"1466.85138"	"1466.85200"	"-0.42"	"-0.00021"	"8/58"	"8"	"58"	"104856673.346191"	"HCD"	"MS2"	"12.41951"	"812.6"	"14.598"	"36.5788"	"9373"	"9373"	"9354"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1435.4"	""	"1156.0"	""	"1386.6"	""	"1078.9"	"1.2"	"1108.5"	"1506.3"	""	"787"	"8"	"35.000"	"28.000"	"6.66721924476024"	"18"	"0.002683"	"0.04027"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILFPYIK"	"[K].dILFPYIk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPH0"	"Enolase-phosphatase E1 OS=Rattus norvegicus OX=10116 GN=Enoph1 PE=2 SV=1"	"Q5PPH0"	"Enolase-phosphatase E1 OS=Rattus norvegicus OX=10116 GN=Enoph1 PE=2 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"733.95349"	"1466.89971"	"1466.90231"	"-1.77"	"-0.00130"	"12/56"	"12"	"56"	"2237372.13659668"	"HCD"	"MS2"	"29.78596"	"149.2"	"100.000"	"69.6055"	"22866"	"22866"	"22842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.2"	""	"209.5"	""	"227.1"	""	"248.1"	""	"248.1"	"252.9"	""	"344"	"29"	"32.000"	"25.000"	"0.019567189316163"	"20"	"0.0001889"	"0.0009772"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFSNIVTK"	"[K].sLFSNIVTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"3"	"733.95349"	"1466.89971"	"1466.89829"	"0.97"	"0.00071"	"8/86"	"8"	"86"	"5011716.23547363"	"HCD"	"MS2"	"11.90363"	"376.2"	"100.000"	"54.5878"	"16692"	"16692"	"16672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"593.0"	""	"543.9"	""	"561.3"	""	"564.9"	"2.5"	"653.7"	"640.5"	""	"344"	"56"	"32.000"	"25.000"	"3.86837392203754E-05"	"23"	"7.476E-05"	"0.0001996"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLNSFLSK"	"[K].tVLNSFLSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"3"	"733.95355"	"1466.89983"	"1466.89829"	"1.05"	"0.00077"	"16/88"	"16"	"88"	"6066762.84326172"	"HCD"	"MS2"	"44.01385"	"410.8"	"100.000"	"57.9420"	"18063"	"18063"	"18043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"500.8"	""	"532.8"	""	"570.6"	""	"709.2"	""	"752.0"	"830.1"	""	"344"	"52"	"32.000"	"25.000"	"0.000107529703157418"	"24"	"0.0001859"	"0.000366"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFSNIVTK"	"[K].sLFSNIVTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"3"	"733.95380"	"1466.90032"	"1466.89829"	"1.38"	"0.00101"	"8/86"	"8"	"86"	"5035941.85791016"	"HCD"	"MS2"	"19.41826"	"353.7"	"100.000"	"54.7826"	"16825"	"16825"	"16805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"547.8"	""	"491.0"	""	"544.9"	""	"540.7"	"3.6"	"608.7"	"610.1"	""	"347"	"53"	"32.000"	"25.000"	"9.14743809568597E-05"	"22"	"0"	"0.0001811"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLNSFLSK"	"[K].tVLNSFLSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"3"	"733.95416"	"1466.90105"	"1466.89829"	"1.88"	"0.00138"	"16/88"	"16"	"88"	"7386374.82885742"	"HCD"	"MS2"	"36.54684"	"465.2"	"100.000"	"58.1449"	"18200"	"18200"	"18181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"546.5"	""	"597.5"	""	"679.4"	""	"783.2"	"2.5"	"883.5"	"919.6"	""	"347"	"52"	"32.000"	"25.000"	"0.000102164374204195"	"24"	"0.0001308"	"0.0003051"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTYDILVTK"	"[R].gTYDILVTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"734.44507"	"1467.88286"	"1467.88230"	"0.38"	"0.00028"	"16/76"	"16"	"76"	"5608085.27984619"	"HCD"	"MS2"	"41.76158"	"469.5"	"100.000"	"47.3799"	"13775"	"13775"	"13752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"652.8"	""	"732.1"	""	"672.5"	""	"701.3"	"3.9"	"881.5"	"802.7"	""	"450"	"60"	"33.000"	"26.000"	"2.22937187600873E-05"	""	"0"	"0.0001429"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTYDILVTK"	"[R].gTYDILVTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"734.44507"	"1467.88286"	"1467.88230"	"0.38"	"0.00028"	"8/76"	"8"	"76"	"5789889.96795654"	"HCD"	"MS2"	"49.16351"	"499.7"	"100.000"	"47.6432"	"13931"	"13931"	"13906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"714.6"	""	"739.8"	""	"764.8"	""	"756.3"	"0.7"	"922.0"	"832.7"	""	"450"	"54"	"33.000"	"26.000"	"8.0757435295126E-05"	""	"7.476E-05"	"0.0001946"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFSTITSK"	"[R].lIFSTITSk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"734.46069"	"1467.91411"	"1467.91869"	"-3.12"	"-0.00229"	"8/72"	"8"	"72"	"2643572.08288574"	"HCD"	"MS2"	"29.11864"	"158.4"	"100.000"	"59.6459"	"18808"	"18808"	"18789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.5"	"2.9"	"219.4"	""	"231.6"	""	"253.1"	"1.9"	"286.2"	"303.8"	""	"254"	"37"	"31.000"	"24.000"	"0.00270896703969615"	"22"	"7.476E-05"	"0.0001987"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFSTITSK"	"[R].lIFSTITSk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"734.46112"	"1467.91496"	"1467.91869"	"-2.54"	"-0.00186"	"8/72"	"8"	"72"	"2282272.40216064"	"HCD"	"MS2"	"39.45004"	"136.1"	"100.000"	"59.5172"	"18702"	"18702"	"18681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.1"	""	"172.5"	""	"214.2"	""	"218.8"	""	"264.8"	"245.7"	""	"254"	"36"	"31.000"	"24.000"	"0.00284973004320411"	"22"	"0.0001889"	"0.0005388"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFSTITSK"	"[R].lIFSTITSk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"489.97726"	"1467.91724"	"1467.91869"	"-0.99"	"-0.00048"	"8/72"	"8"	"72"	"1857953.68640137"	"HCD"	"MS2"	"26.7493"	"74.4"	"100.000"	"59.5930"	"18787"	"18787"	"18757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.3"	""	"115.2"	""	"111.6"	""	"112.0"	""	"122.9"	"137.0"	""	"256"	"36"	"31.000"	"24.000"	"0.00332820424085155"	"17"	"0.0006037"	"0.005361"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFSTITSK"	"[R].lIFSTITSk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"489.97745"	"1467.91779"	"1467.91869"	"-0.61"	"-0.00030"	"8/72"	"8"	"72"	"1806826.2010498"	"HCD"	"MS2"	"26.88066"	"74.4"	"100.000"	"59.4134"	"18660"	"18660"	"18633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.4"	""	"95.3"	""	"122.8"	""	"118.5"	"0.2"	"138.5"	"138.7"	""	"256"	"16"	"31.000"	"24.000"	"0.324496464703732"	"13"	"0.00109"	"0.01472"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPLLTDPK"	"[K].iIPLLTDPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"489.98941"	"1467.95368"	"1467.95507"	"-0.95"	"-0.00047"	"9/66"	"9"	"66"	"7729298.94854736"	"HCD"	"MS2"	"13.45412"	"206.7"	"100.000"	"65.5209"	"21207"	"21207"	"21187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"313.0"	""	"308.5"	""	"314.8"	""	"294.2"	"5.8"	"363.6"	"356.4"	""	"106"	"32"	"27.000"	"20.000"	"0.00329819151139654"	""	"0.0001859"	"0.0003288"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPLLTDPK"	"[K].iIPLLTDPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"734.48077"	"1467.95427"	"1467.95507"	"-0.55"	"-0.00040"	"12/66"	"12"	"66"	"7260831.65991211"	"HCD"	"MS2"	"3.399645"	"262.9"	"100.000"	"65.5114"	"21204"	"21204"	"21187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"377.7"	""	"369.2"	""	"409.8"	""	"357.0"	"1.5"	"495.0"	"480.0"	""	"106"	"21"	"27.000"	"20.000"	"0.045110316024726"	"20"	"0.0001889"	"0.0008755"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPLLTDPK"	"[K].iIPLLTDPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"489.98969"	"1467.95450"	"1467.95507"	"-0.39"	"-0.00019"	"9/66"	"9"	"66"	"4800107.12896729"	"HCD"	"MS2"	"35.55281"	"122.2"	"100.000"	"65.2277"	"21088"	"21088"	"21059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.9"	""	"184.3"	""	"182.0"	""	"198.6"	""	"221.3"	"207.4"	""	"104"	"30"	"27.000"	"20.000"	"0.00570168661994456"	"16"	"0.0003839"	"0.001934"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPLLTDPK"	"[K].iIPLLTDPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"489.98972"	"1467.95459"	"1467.95507"	"-0.33"	"-0.00016"	"10/66"	"10"	"66"	"7813195.74377441"	"HCD"	"MS2"	"12.9264"	"214.7"	"100.000"	"65.5445"	"21164"	"21164"	"21145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.3"	""	"321.8"	""	"330.9"	""	"307.3"	"3.1"	"371.3"	"377.1"	""	"104"	"35"	"27.000"	"20.000"	"0.00165578271129759"	""	"0.0001889"	"0.0006499"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPLLTDPK"	"[K].iIPLLTDPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"734.48114"	"1467.95500"	"1467.95507"	"-0.05"	"-0.00003"	"8/66"	"8"	"66"	"3476822.06201172"	"HCD"	"MS2"	"31.23745"	"161.3"	"100.000"	"65.2094"	"21080"	"21080"	"21059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.7"	""	"249.7"	""	"232.7"	""	"248.8"	"0.3"	"268.5"	"272.9"	""	"104"	"38"	"27.000"	"20.000"	"0.000866968550526552"	"17"	"0.0001308"	"0.0003027"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPLLTDPK"	"[K].iIPLLTDPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"734.48126"	"1467.95525"	"1467.95507"	"0.12"	"0.00009"	"8/66"	"8"	"66"	"6161310.97973633"	"HCD"	"MS2"	"2.656727"	"264.0"	"100.000"	"65.5422"	"21163"	"21163"	"21145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"380.2"	""	"401.6"	""	"411.5"	""	"372.4"	"0.9"	"477.1"	"456.0"	""	"102"	"39"	"27.000"	"20.000"	"0.000653988597154571"	"20"	"0.0001889"	"0.0006962"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPLLTDPK"	"[K].iIPLLTDPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8163"	"0.0000"	"1"	"1"	"1"	"489.98996"	"1467.95533"	"1467.95507"	"0.17"	"0.00008"	"7/66"	"7"	"66"	"4507539.12927246"	"HCD"	"MS2"	"20.50438"	"112.9"	"100.000"	"65.2450"	"21042"	"21042"	"21017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.3"	""	"171.9"	""	"175.9"	""	"176.1"	""	"181.8"	"189.4"	""	"102"	"49"	"27.000"	"20.000"	"7.02376829135913E-05"	""	"0.0001308"	"0.0002508"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPLLTDPK"	"[K].iIPLLTDPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"734.48151"	"1467.95574"	"1467.95507"	"0.45"	"0.00033"	"8/66"	"8"	"66"	"3254424.84521484"	"HCD"	"MS2"	"20.67893"	"157.0"	"100.000"	"65.2338"	"21037"	"21037"	"21017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.2"	""	"236.1"	""	"231.1"	""	"248.0"	""	"279.1"	"256.6"	""	"102"	"38"	"27.000"	"20.000"	"0.000854220866773483"	"18"	"0.0001859"	"0.0003217"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPNWFMK"	"[R].gDPNWFmk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"490.25986"	"1468.76502"	"1468.76589"	"-0.60"	"-0.00029"	"6/64"	"6"	"64"	"14992589.9152832"	"HCD"	"MS2"	"22.64621"	"268.7"	"55.496"	"45.2254"	"12947"	"12947"	"12923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"337.5"	""	"305.2"	""	"358.4"	""	"556.2"	"1.9"	"547.9"	"440.7"	""	"755"	"17"	"35.000"	"28.000"	"0.690107831593886"	"21"	"0.003635"	"0.08368"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPNWFMK"	"[R].gDPNWFmk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"490.26001"	"1468.76548"	"1468.76589"	"-0.28"	"-0.00014"	"6/64"	"6"	"64"	"12453960.2831421"	"HCD"	"MS2"	"21.1249"	"338.0"	"86.082"	"45.0003"	"12806"	"12806"	"12784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"388.6"	""	"411.2"	"3.9"	"441.2"	""	"722.9"	""	"644.0"	"600.0"	""	"756"	"30"	"35.000"	"28.000"	"0.0393089822683384"	"23"	"0.0009727"	"0.01073"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPNWFMK"	"[R].gDPNWFmk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"734.88647"	"1468.76567"	"1468.76589"	"-0.15"	"-0.00011"	"12/64"	"12"	"64"	"3000690.47967529"	"HCD"	"MS2"	"6.094292"	"225.1"	"100.000"	"45.4185"	"13026"	"13026"	"13003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"340.4"	""	"287.9"	""	"308.7"	""	"397.3"	"5.4"	"404.8"	"386.6"	""	"758"	"13"	"35.000"	"28.000"	"1.83924341561444"	"17"	"0.003635"	"0.08341"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPNWFMK"	"[R].gDPNWFmk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"734.88696"	"1468.76665"	"1468.76589"	"0.52"	"0.00038"	"6/64"	"6"	"64"	"3586022.38037109"	"HCD"	"MS2"	"0"	"265.5"	"100.000"	"45.1498"	"12867"	"12867"	"12848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"346.6"	""	"312.7"	""	"331.5"	""	"552.5"	"2.1"	"529.3"	"442.4"	""	"774"	"25"	"35.000"	"28.000"	"0.135740975219644"	"21"	"0.001158"	"0.01545"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVLGYWDIR"	"[K].sMVLGYWDIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"734.89374"	"1468.78020"	"1468.78199"	"-1.22"	"-0.00089"	"7/86"	"7"	"86"	"2427654.49304199"	"HCD"	"MS2"	"10.83295"	"135.8"	"100.000"	"64.8518"	"20934"	"20934"	"20915"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.6"	""	"185.1"	""	"216.6"	""	"169.5"	"3.0"	"240.0"	"267.1"	""	"829"	"60"	"36.000"	"29.000"	"4.53444913819783E-05"	"28"	"0"	"4.175E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVLGYWDIR"	"[K].sMVLGYWDIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"734.89447"	"1468.78166"	"1468.78199"	"-0.22"	"-0.00016"	"7/86"	"7"	"86"	"2707600.37182617"	"HCD"	"MS2"	"7.248336"	"156.1"	"100.000"	"64.7681"	"20847"	"20847"	"20825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.7"	""	"224.6"	""	"226.6"	""	"200.1"	"4.8"	"259.7"	"301.5"	""	"838"	"60"	"36.000"	"29.000"	"4.41788109587937E-05"	""	"0"	"2.848E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLTGATGHLNR"	"[K].tVLTGATGHLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.28558"	"1468.84220"	"1468.84334"	"-0.78"	"-0.00038"	"9/102"	"9"	"102"	"10064907.8222046"	"HCD"	"MS2"	"5.880362"	"266.5"	"100.000"	"29.3238"	"6414"	"6414"	"6390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.5"	""	"359.1"	""	"303.6"	""	"458.8"	"13.9"	"502.6"	"447.4"	""	"647"	"57"	"35.000"	"28.000"	"5.8867322776033E-05"	"16"	"0"	"1.199E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLTGATGHLNR"	"[K].tVLTGATGHLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.28561"	"1468.84229"	"1468.84334"	"-0.72"	"-0.00035"	"9/102"	"9"	"102"	"9391837.24517822"	"HCD"	"MS2"	"6.790686"	"283.0"	"100.000"	"29.4069"	"6489"	"6489"	"6468"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"475.5"	""	"376.6"	""	"328.0"	""	"519.9"	"11.6"	"512.8"	"454.0"	""	"644"	"55"	"35.000"	"28.000"	"9.83684598455395E-05"	"16"	"0"	"1.224E-05"	"1.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEIMTK"	"[R].fLEEIMTk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"734.92572"	"1468.84416"	"1468.84856"	"-2.99"	"-0.00220"	"14/64"	"14"	"64"	"1868199.30432129"	"HCD"	"MS2"	"0"	"159.3"	"100.000"	"66.9386"	"21786"	"21786"	"21763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.9"	""	"201.2"	""	"224.4"	""	"230.9"	"1.8"	"348.0"	"337.0"	""	"635"	"46"	"35.000"	"28.000"	"0.000856532269801262"	"25"	"0.0001308"	"0.0003131"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLLEMFK"	"[K].eTLLEMFk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"734.92712"	"1468.84697"	"1468.84856"	"-1.08"	"-0.00079"	"6/64"	"6"	"64"	"1889356.10009766"	"HCD"	"MS2"	"8.251691"	"171.4"	"100.000"	"70.9392"	"23410"	"23410"	"23386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.9"	""	"242.7"	""	"275.4"	""	"175.8"	""	"294.1"	"319.8"	""	"617"	"42"	"34.000"	"27.000"	"0.00188910095847092"	"22"	"0.0001308"	"0.0002548"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLLEMFK"	"[K].eTLLEMFk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"734.92767"	"1468.84807"	"1468.84856"	"-0.33"	"-0.00024"	"6/64"	"6"	"64"	"1839606.51739502"	"HCD"	"MS2"	"6.301121"	"162.9"	"100.000"	"70.9982"	"23382"	"23382"	"23363"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"277.7"	""	"234.4"	""	"242.4"	""	"183.1"	""	"290.3"	"316.6"	""	"610"	"42"	"34.000"	"27.000"	"0.001833579899324"	"22"	"0.0001859"	"0.0003266"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEIMTK"	"[R].fLEEIMTk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"734.92767"	"1468.84807"	"1468.84856"	"-0.33"	"-0.00024"	"14/64"	"14"	"64"	"2211904.04803467"	"HCD"	"MS2"	"0"	"188.9"	"100.000"	"66.9992"	"21758"	"21758"	"21737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.7"	""	"236.6"	""	"245.5"	""	"282.4"	"3.4"	"439.8"	"388.8"	""	"610"	"48"	"34.000"	"27.000"	"0.000496935289955115"	"20"	"0.0001889"	"0.0004597"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFQEFLK"	"[K].lSFQEFLk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62632"	"Follistatin-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fstl1 PE=1 SV=1"	"Q62632"	"Follistatin-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fstl1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"735.44238"	"1469.87749"	"1469.87682"	"0.45"	"0.00033"	"12/70"	"12"	"70"	"1038362.04718018"	"HCD"	"MS2"	"49.70456"	"77.9"	"100.000"	"68.2022"	"22293"	"22293"	"22266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.1"	""	"118.4"	""	"104.4"	""	"132.7"	"2.7"	"145.9"	"135.7"	""	"440"	"1"	"33.000"	"26.000"	"15.9375911216498"	"13"	"0.0008731"	"0.009229"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHPVSTMVK"	"[R].iHPVSTMVk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"490.63489"	"1469.89011"	"1469.89143"	"-0.90"	"-0.00044"	"7/66"	"7"	"66"	"31478602.3447266"	"HCD"	"MS2"	"32.45178"	"238.1"	"14.829"	"33.0784"	"7992"	"7992"	"7974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"385.1"	""	"376.9"	""	"354.0"	""	"311.1"	""	"412.6"	"415.2"	""	"424"	"17"	"33.000"	"26.000"	"0.455340060515673"	"16"	"0.0003839"	"0.001915"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHPVSTMVK"	"[R].iHPVSTMVk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"735.44885"	"1469.89043"	"1469.89143"	"-0.68"	"-0.00050"	"8/66"	"8"	"66"	"1859698.44799805"	"HCD"	"MS2"	"0"	"110.9"	"100.000"	"33.0280"	"7972"	"7972"	"7942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.1"	""	"175.2"	""	"163.9"	""	"105.8"	"1.9"	"176.5"	"208.7"	""	"423"	"36"	"33.000"	"26.000"	"0.00486754944381899"	"25"	"0"	"0.0001167"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHPVSTMVK"	"[R].iHPVSTMVk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"490.63501"	"1469.89048"	"1469.89143"	"-0.65"	"-0.00032"	"7/66"	"7"	"66"	"45642227.1235352"	"HCD"	"MS2"	"32.53418"	"256.1"	"12.904"	"32.9944"	"7915"	"7915"	"7896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"420.2"	""	"393.7"	""	"362.8"	""	"326.5"	""	"454.7"	"471.0"	""	"423"	"21"	"33.000"	"26.000"	"0.171123782676228"	"16"	"0.0001889"	"0.0006298"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHPVSTMVK"	"[R].iHPVSTMVk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"735.44891"	"1469.89055"	"1469.89143"	"-0.60"	"-0.00044"	"8/66"	"8"	"66"	"1634419.47418213"	"HCD"	"MS2"	"100"	"107.4"	"100.000"	"32.9669"	"7904"	"7904"	"7880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.4"	""	"185.6"	""	"162.4"	""	"120.5"	""	"178.5"	"193.0"	""	"423"	"39"	"33.000"	"26.000"	"0.00257223339136707"	"19"	"0"	"0.0001559"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITEALHSIKTK"	"[K].iTEALHSIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"1"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"490.64114"	"1469.90888"	"1469.88889"	"13.60"	"0.00666"	"10/100"	"10"	"100"	"13410758.5252686"	"HCD"	"MS2"	"18.26455"	"354.0"	"73.837"	"40.6277"	"11075"	"11075"	"11053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"508.7"	""	"443.7"	""	"511.6"	""	"593.3"	""	"639.7"	"657.2"	""	"362"	"35"	"32.000"	"25.000"	"0.00618982790949814"	""	"0.003635"	"0.08388"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ITEALHSIKTK"	"[K].iTEALHSIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"1"	"2"	"2"	"0.0385"	"0.0000"	"1"	"1"	"1"	"735.45813"	"1469.90898"	"1469.88889"	"13.67"	"0.01004"	"14/100"	"14"	"100"	"5944328.20556641"	"HCD"	"MS2"	"0"	"322.6"	"100.000"	"40.3151"	"10947"	"10947"	"10925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"516.5"	""	"389.8"	""	"464.1"	""	"579.5"	""	"518.1"	"585.5"	""	"362"	"52"	"32.000"	"25.000"	"0.000104394729873997"	"24"	"0.0001889"	"0.001041"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ITEALHSIK"	"[K].iTEALHSIk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0385"	"2"	"2"	"2"	"735.45813"	"1469.90898"	"1469.90919"	"-0.14"	"-0.00010"	"14/74"	"14"	"74"	"5944328.20556641"	"HCD"	"MS2"	"0"	"322.6"	"100.000"	"40.3151"	"10947"	"10947"	"10925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"516.5"	""	"389.8"	""	"464.1"	""	"579.5"	""	"518.1"	"585.5"	""	"362"	"50"	"32.000"	"25.000"	"0.000201223442637968"	"24"	"0"	"1.116E-05"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITEALHSIKTK"	"[K].iTEALHSIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"1"	"2"	"2"	"0.0577"	"0.0000"	"1"	"1"	"1"	"735.45813"	"1469.90898"	"1469.88889"	"13.67"	"0.01004"	"14/100"	"14"	"100"	"6281307.68225098"	"HCD"	"MS2"	"0"	"375.5"	"100.000"	"40.1782"	"10847"	"10847"	"10821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"575.6"	""	"458.3"	""	"560.9"	""	"687.0"	"1.6"	"602.6"	"665.9"	""	"362"	"52"	"32.000"	"25.000"	"0.000105118359571358"	"23"	"0.005353"	"0.1669"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYLTVLQK"	"[K].fYLTVLQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"735.45837"	"1469.90947"	"1469.91321"	"-2.54"	"-0.00187"	"7/58"	"7"	"58"	"1784545.54547119"	"HCD"	"MS2"	"13.97915"	"126.8"	"100.000"	"65.1009"	"21036"	"21036"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.6"	""	"164.6"	""	"179.3"	""	"225.3"	"0.9"	"233.7"	"236.4"	""	"356"	"17"	"32.000"	"25.000"	"0.343890360429013"	"20"	"0.0003571"	"0.001502"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITEALHSIKTK"	"[K].iTEALHSIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"1"	"3"	"3"	"0.1143"	"0.0000"	"1"	"1"	"1"	"490.64145"	"1469.90979"	"1469.88889"	"14.22"	"0.00697"	"10/100"	"10"	"100"	"14875094.9686279"	"HCD"	"MS2"	"20.15923"	"358.3"	"63.459"	"40.4742"	"10968"	"10968"	"10949"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"510.6"	""	"436.6"	""	"505.8"	""	"604.4"	""	"663.0"	"676.1"	""	"342"	"35"	"32.000"	"25.000"	"0.00535791858857965"	""	"0.006001"	"0.2091"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ITEALHSIKTK"	"[K].iTEALHSIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"1"	"3"	"3"	"0.0370"	"0.0000"	"1"	"1"	"1"	"490.64154"	"1469.91007"	"1469.88889"	"14.40"	"0.00706"	"8/100"	"8"	"100"	"223366808.671875"	"HCD"	"MS2"	"3.920427"	"488.6"	"7.688"	"40.3015"	"10942"	"10942"	"10925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"746.8"	""	"584.7"	""	"723.6"	""	"906.9"	""	"774.3"	"888.9"	""	"341"	"54"	"32.000"	"25.000"	"6.16203815800541E-05"	"19"	"0.00103"	"0.01114"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ITEALHSIK"	"[K].iTEALHSIk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0370"	"2"	"2"	"2"	"490.64154"	"1469.91007"	"1469.90919"	"0.60"	"0.00029"	"8/74"	"8"	"74"	"223366808.671875"	"HCD"	"MS2"	"3.920427"	"488.6"	"7.688"	"40.3015"	"10942"	"10942"	"10925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"746.8"	""	"584.7"	""	"723.6"	""	"906.9"	""	"774.3"	"888.9"	""	"341"	"52"	"32.000"	"25.000"	"9.8565376082675E-05"	"19"	"0"	"5.45E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ITEALHSIKTK"	"[K].iTEALHSIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"1"	"3"	"3"	"0.0392"	"0.0000"	"1"	"1"	"1"	"490.64163"	"1469.91034"	"1469.88889"	"14.59"	"0.00715"	"13/100"	"13"	"100"	"232175273.976074"	"HCD"	"MS2"	"4.346583"	"588.1"	"8.808"	"40.1546"	"10838"	"10838"	"10821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"908.0"	""	"692.3"	""	"831.7"	""	"1090.3"	""	"969.2"	"1078.3"	""	"341"	"51"	"32.000"	"25.000"	"0.000129337476542476"	"20"	"0.0006037"	"0.004788"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ITEALHSIK"	"[K].iTEALHSIk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0392"	"2"	"2"	"2"	"490.64163"	"1469.91034"	"1469.90919"	"0.79"	"0.00039"	"13/74"	"13"	"74"	"232175273.976074"	"HCD"	"MS2"	"4.346583"	"588.1"	"8.808"	"40.1546"	"10838"	"10838"	"10821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"908.0"	""	"692.3"	""	"831.7"	""	"1090.3"	""	"969.2"	"1078.3"	""	"341"	"49"	"32.000"	"25.000"	"0.000232126318360445"	"20"	"0"	"3.425E-05"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYAYALALK"	"[R].vYAYALALk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"3"	"3"	"0.6176"	"0.0000"	"1"	"1"	"1"	"490.64200"	"1469.91144"	"1469.91321"	"-1.20"	"-0.00059"	"10/66"	"10"	"66"	"2189759.43066406"	"HCD"	"MS2"	"11.59027"	"72.2"	"100.000"	"61.1547"	"19425"	"19425"	"19395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.7"	""	"122.8"	""	"118.0"	""	"107.0"	""	"114.9"	"121.9"	""	"343"	"34"	"32.000"	"25.000"	"0.00714930992651626"	""	"0.0001308"	"0.0002339"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYLTVLQK"	"[K].fYLTVLQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"735.45947"	"1469.91167"	"1469.91321"	"-1.05"	"-0.00077"	"11/58"	"11"	"58"	"1698530.17089844"	"HCD"	"MS2"	"25.87822"	"129.3"	"100.000"	"65.0445"	"20960"	"20960"	"20937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.4"	""	"184.7"	""	"181.0"	""	"227.1"	"3.3"	"236.0"	"229.4"	""	"343"	"25"	"32.000"	"25.000"	"0.0560098132175556"	"18"	"0.0001889"	"0.001028"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYAYALALK"	"[R].vYAYALALk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"735.46021"	"1469.91313"	"1469.91321"	"-0.05"	"-0.00004"	"8/66"	"8"	"66"	"2615955.68115234"	"HCD"	"MS2"	"26.92998"	"182.0"	"100.000"	"61.0119"	"19366"	"19366"	"19347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"280.3"	""	"322.6"	""	"317.9"	""	"233.0"	"2.3"	"271.7"	"290.7"	""	"337"	"50"	"32.000"	"25.000"	"0.000159440961690136"	""	"0"	"0.0001702"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYAYALALK"	"[R].vYAYALALk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"735.46118"	"1469.91509"	"1469.91321"	"1.28"	"0.00094"	"8/66"	"8"	"66"	"2910544.13653564"	"HCD"	"MS2"	"21.33208"	"216.2"	"100.000"	"60.8878"	"19262"	"19262"	"19241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"322.7"	""	"370.0"	""	"380.8"	""	"280.0"	"4.9"	"339.8"	"345.0"	""	"310"	"50"	"31.000"	"24.000"	"0.000142669683621742"	""	"0"	"0.0001244"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGIGLLGISK"	"[K].gPGIGLLGISk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"490.65308"	"1469.94468"	"1469.94557"	"-0.61"	"-0.00030"	"11/80"	"11"	"80"	"5962319.87774658"	"HCD"	"MS2"	"13.49034"	"172.6"	"100.000"	"57.4051"	"17844"	"17844"	"17819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.4"	""	"254.0"	""	"243.7"	""	"278.0"	"1.2"	"316.5"	"311.1"	""	"163"	"48"	"29.000"	"22.000"	"0.000119993468948267"	""	"0"	"0.0001101"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGIGLLGISK"	"[K].gPGIGLLGISk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"735.47668"	"1469.94609"	"1469.94557"	"0.35"	"0.00026"	"15/80"	"15"	"80"	"5975023.97076416"	"HCD"	"MS2"	"17.74498"	"433.0"	"100.000"	"57.6732"	"18007"	"18007"	"17989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"592.7"	""	"644.6"	""	"597.4"	""	"696.2"	"4.0"	"796.0"	"770.8"	""	"157"	"52"	"28.000"	"21.000"	"4.46549550712415E-05"	"16"	"0"	"4.475E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGIGLLGISK"	"[K].gPGIGLLGISk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.65359"	"1469.94623"	"1469.94557"	"0.45"	"0.00022"	"11/80"	"11"	"80"	"6485390.46008301"	"HCD"	"MS2"	"11.54395"	"190.3"	"100.000"	"57.6134"	"17983"	"17983"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"264.3"	""	"299.1"	""	"261.6"	""	"288.7"	"2.6"	"333.9"	"351.6"	""	"157"	"46"	"28.000"	"21.000"	"0.000182755163726703"	"15"	"0"	"0.0001425"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGIGLLGISK"	"[K].gPGIGLLGISk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"735.47693"	"1469.94658"	"1469.94557"	"0.69"	"0.00050"	"15/80"	"15"	"80"	"6200469.60076904"	"HCD"	"MS2"	"15.81149"	"435.4"	"100.000"	"57.4352"	"17856"	"17856"	"17835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"594.0"	""	"683.7"	""	"602.6"	""	"704.6"	"8.8"	"755.4"	"773.6"	""	"157"	"53"	"28.000"	"21.000"	"4.02596186433221E-05"	"16"	"0"	"2.568E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINRPIIVFR"	"[K].lINRPIIVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.65552"	"1469.95200"	"1469.95177"	"0.16"	"0.00008"	"6/88"	"6"	"88"	"10108267.5108032"	"HCD"	"MS2"	"55.23936"	"307.0"	"100.000"	"47.9859"	"14071"	"14071"	"14050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"479.7"	""	"438.3"	""	"473.1"	""	"483.9"	""	"502.3"	"527.1"	""	"144"	"26"	"28.000"	"21.000"	"0.0169954432789002"	"14"	"0.0003839"	"0.001984"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINRPIIVFR"	"[K].lINRPIIVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.65588"	"1469.95310"	"1469.95177"	"0.90"	"0.00044"	"6/88"	"6"	"88"	"10548629.1618042"	"HCD"	"MS2"	"42.26146"	"300.8"	"100.000"	"47.7060"	"13909"	"13909"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.4"	""	"416.1"	""	"499.6"	""	"482.6"	""	"471.8"	"545.0"	""	"155"	"26"	"28.000"	"21.000"	"0.0181677733187294"	"14"	"0"	"8.231E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"KALPPEK"	"[K].kALPPEk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"3"	"490.65903"	"1469.96253"	"1469.96586"	"-2.27"	"-0.00111"	"5/60"	"5"	"60"	"6050779.09014893"	"HCD"	"MS2"	"52.5528"	"392.2"	"100.000"	"29.7249"	"6578"	"6578"	"6556"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"659.6"	""	"520.2"	""	"460.6"	""	"664.2"	""	"760.2"	"649.9"	""	"100"	"2"	"26.000"	"20.000"	"3.34942304708263"	"13"	"0.006751"	"0.251"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KALPPEK"	"[K].kALPPEk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.65942"	"1469.96372"	"1469.96586"	"-1.46"	"-0.00071"	"6/60"	"6"	"60"	"5647962.70495605"	"HCD"	"MS2"	"8.154116"	"366.6"	"100.000"	"29.8196"	"6658"	"6658"	"6636"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"572.0"	""	"477.9"	""	"409.1"	""	"660.4"	"3.0"	"722.1"	"630.4"	""	"100"	"4"	"26.000"	"20.000"	"2.12309781973156"	"13"	"0.005448"	"0.1735"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLSHGK"	"[R].kLLSHGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"368.24860"	"1469.97255"	"1469.97709"	"-3.09"	"-0.00114"	"7/60"	"7"	"60"	"7145793.04547119"	"HCD"	"MS2"	"0"	"518.3"	"100.000"	"25.9059"	"5067"	"5067"	"5055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"891.9"	""	"810.6"	""	"779.6"	""	"856.3"	"4.2"	"805.2"	"746.3"	""	"84"	"5"	"26.000"	"19.000"	"1.19467366512812"	"13"	"0.006061"	"0.2148"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLSHGK"	"[R].kLLSHGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"368.24872"	"1469.97304"	"1469.97709"	"-2.76"	"-0.00101"	"9/60"	"9"	"60"	"8684500.99633789"	"HCD"	"MS2"	"0"	"609.1"	"100.000"	"26.0099"	"5145"	"5145"	"5128"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1008.0"	""	"991.0"	""	"945.6"	""	"969.8"	"9.1"	"944.6"	"884.2"	""	"84"	"8"	"26.000"	"19.000"	"0.68746293899968"	"13"	"0.001846"	"0.02575"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLSHGK"	"[R].kLLSHGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.66272"	"1469.97361"	"1469.97709"	"-2.37"	"-0.00116"	"6/60"	"6"	"60"	"5845578.98120117"	"HCD"	"MS2"	"76.11298"	"437.5"	"100.000"	"25.9356"	"5079"	"5079"	"5064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"675.8"	""	"699.0"	""	"651.0"	""	"695.9"	""	"760.9"	"660.7"	""	"82"	"14"	"26.000"	"19.000"	"0.160244767274885"	"13"	"0.0006737"	"0.006407"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLSHGK"	"[R].kLLSHGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.66336"	"1469.97553"	"1469.97709"	"-1.07"	"-0.00052"	"6/60"	"6"	"60"	"10959827.6097412"	"HCD"	"MS2"	"26.25423"	"694.4"	"100.000"	"26.0878"	"5176"	"5176"	"5161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1150.0"	""	"1059.8"	""	"1054.6"	""	"1121.9"	""	"1102.9"	"1072.8"	""	"72"	"10"	"25.000"	"18.000"	"0.33830039180327"	"13"	"0.0004166"	"0.002498"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQASTMAFK"	"[K].iQASTmAFk.[Q]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"490.95087"	"1470.83805"	"1470.83906"	"-0.69"	"-0.00034"	"9/80"	"9"	"80"	"16187650.6651611"	"HCD"	"MS2"	"42.4241"	"302.8"	"32.378"	"37.7137"	"9839"	"9839"	"9816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"367.3"	""	"395.5"	""	"430.4"	""	"571.1"	"1.9"	"561.7"	"542.0"	""	"675"	"30"	"35.000"	"28.000"	"0.0303580433766387"	"23"	"0.0003839"	"0.001952"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQASTMAFK"	"[K].iQASTmAFk.[Q]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"735.92267"	"1470.83806"	"1470.83906"	"-0.68"	"-0.00050"	"14/80"	"14"	"80"	"11933559.4454956"	"HCD"	"MS2"	"0"	"740.5"	"100.000"	"37.5739"	"9782"	"9782"	"9752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1003.7"	""	"1127.7"	""	"1226.9"	""	"1359.4"	"2.8"	"1133.4"	"1144.0"	""	"675"	"30"	"35.000"	"28.000"	"0.0340622849050881"	"24"	"0.0001889"	"0.0006212"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQASTMAFK"	"[K].iQASTmAFk.[Q]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"735.92352"	"1470.83977"	"1470.83906"	"0.48"	"0.00036"	"14/80"	"14"	"80"	"13221948.0825195"	"HCD"	"MS2"	"0"	"795.9"	"100.000"	"37.6787"	"9868"	"9868"	"9841"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1072.1"	""	"1245.2"	""	"1300.6"	""	"1438.1"	"4.8"	"1230.4"	"1230.8"	""	"696"	"30"	"35.000"	"28.000"	"0.0352029650082444"	"24"	"0.0001889"	"0.000472"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLYAHFK"	"[K].sFLYAHFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"490.95474"	"1470.84967"	"1470.85094"	"-0.86"	"-0.00042"	"7/56"	"7"	"56"	"17686463.1501465"	"HCD"	"MS2"	"9.078428"	"565.6"	"88.046"	"42.4742"	"11785"	"11785"	"11756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"832.9"	""	"810.4"	""	"814.8"	""	"1029.3"	"2.0"	"884.2"	"975.0"	""	"640"	"37"	"35.000"	"28.000"	"0.00597241501067094"	"18"	"0"	"0.000176"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLYAHFK"	"[K].sFLYAHFk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"490.95490"	"1470.85013"	"1470.85094"	"-0.55"	"-0.00027"	"8/56"	"8"	"56"	"14772482.1607056"	"HCD"	"MS2"	"14.4365"	"547.0"	"100.000"	"42.7098"	"11925"	"11925"	"11907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"744.5"	""	"757.8"	""	"787.6"	""	"1027.1"	""	"912.2"	"954.7"	""	"639"	"19"	"35.000"	"28.000"	"0.431987183940572"	"15"	"0.0002277"	"0.001164"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQINTYVK"	"[R].fQINTYVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"735.93982"	"1470.87236"	"1470.87207"	"0.20"	"0.00015"	"14/68"	"14"	"68"	"4201050.35144043"	"HCD"	"MS2"	"7.717919"	"379.3"	"100.000"	"48.3740"	"14182"	"14182"	"14160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"565.7"	""	"608.8"	""	"580.7"	""	"562.3"	""	"617.0"	"655.4"	""	"533"	"41"	"34.000"	"27.000"	"0.0023425950073543"	"23"	"0.0001889"	"0.0004707"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQINTYVK"	"[R].fQINTYVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"735.93994"	"1470.87261"	"1470.87207"	"0.36"	"0.00027"	"14/68"	"14"	"68"	"3903110.79266357"	"HCD"	"MS2"	"32.84951"	"346.8"	"100.000"	"48.6143"	"14328"	"14328"	"14303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"497.7"	""	"555.6"	""	"533.8"	""	"506.2"	"1.0"	"601.3"	"586.4"	""	"533"	"41"	"34.000"	"27.000"	"0.00235883310019917"	"23"	"0.0001889"	"0.0007896"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAASNIALAER"	"[R].iIAASNIALAER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"735.94568"	"1470.88408"	"1470.88414"	"-0.04"	"-0.00003"	"11/112"	"11"	"112"	"2092858.91308594"	"HCD"	"MS2"	"41.07432"	"138.4"	"100.000"	"47.7428"	"13924"	"13924"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.2"	""	"188.2"	""	"199.6"	""	"244.0"	"0.6"	"254.2"	"248.2"	""	"497"	"72"	"33.000"	"26.000"	"1.47003066092605E-06"	"26"	"0"	"3.12E-06"	"1.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILSNLIPK"	"[K].dILSNLIPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"490.98090"	"1470.92813"	"1470.92959"	"-0.99"	"-0.00048"	"7/78"	"7"	"78"	"10020569.6394043"	"HCD"	"MS2"	"14.15959"	"248.6"	"100.000"	"66.4532"	"21535"	"21535"	"21513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"392.2"	""	"360.5"	""	"375.4"	""	"377.5"	""	"417.2"	"431.3"	""	"311"	"47"	"31.000"	"24.000"	"0.000330925621650312"	"23"	"0.0001889"	"0.0005724"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILSNLIPK"	"[K].dILSNLIPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"490.98099"	"1470.92841"	"1470.92959"	"-0.80"	"-0.00039"	"7/78"	"7"	"78"	"5417626.19952393"	"HCD"	"MS2"	"40.46112"	"142.6"	"100.000"	"66.3300"	"21538"	"21538"	"21507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.6"	""	"197.3"	""	"211.0"	""	"228.3"	"2.1"	"244.6"	"247.0"	""	"311"	"45"	"31.000"	"24.000"	"0.000520871257890422"	"22"	"0.0001889"	"0.0004581"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILSNLIPK"	"[K].dILSNLIPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"490.98099"	"1470.92841"	"1470.92959"	"-0.80"	"-0.00039"	"7/78"	"7"	"78"	"16447840.8619385"	"HCD"	"MS2"	"10.48453"	"203.2"	"46.423"	"66.7529"	"21658"	"21658"	"21641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"316.2"	""	"308.5"	""	"316.3"	""	"303.2"	"1.7"	"319.6"	"355.8"	""	"311"	"42"	"31.000"	"24.000"	"0.00107579715977895"	"21"	"0.0001889"	"0.0006219"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILSNLIPK"	"[K].dILSNLIPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"735.96796"	"1470.92864"	"1470.92959"	"-0.65"	"-0.00048"	"6/78"	"6"	"78"	"4359330.2689209"	"HCD"	"MS2"	"24.97028"	"238.0"	"100.000"	"66.3463"	"21544"	"21544"	"21523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.5"	""	"323.4"	""	"334.8"	""	"376.5"	"3.2"	"394.9"	"430.5"	""	"311"	"41"	"31.000"	"24.000"	"0.00110339342918307"	"21"	"0.0001889"	"0.0005054"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILSNLIPK"	"[K].dILSNLIPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"490.98117"	"1470.92896"	"1470.92959"	"-0.43"	"-0.00021"	"7/78"	"7"	"78"	"18552546.4724121"	"HCD"	"MS2"	"9.204918"	"236.6"	"49.237"	"66.6530"	"21669"	"21669"	"21651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"359.2"	""	"354.4"	""	"359.7"	""	"335.5"	""	"410.1"	"421.4"	""	"302"	"40"	"31.000"	"24.000"	"0.00145203454035933"	"20"	"0.0001889"	"0.0008481"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILSNLIPK"	"[K].dILSNLIPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"735.96851"	"1470.92974"	"1470.92959"	"0.10"	"0.00007"	"7/78"	"7"	"78"	"3398921.22955322"	"HCD"	"MS2"	"28.39013"	"189.4"	"100.000"	"66.4117"	"21518"	"21518"	"21497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.0"	""	"251.0"	""	"279.5"	""	"316.0"	"2.9"	"301.9"	"337.7"	""	"298"	"39"	"31.000"	"24.000"	"0.00182888445442603"	"20"	"0.0001859"	"0.0003544"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILSNLIPK"	"[K].dILSNLIPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"735.96857"	"1470.92986"	"1470.92959"	"0.18"	"0.00014"	"6/78"	"6"	"78"	"11730238.9171143"	"HCD"	"MS2"	"7.589681"	"312.2"	"54.086"	"66.6485"	"21668"	"21668"	"21651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"491.5"	""	"437.9"	""	"451.3"	""	"461.3"	""	"551.1"	"565.5"	""	"298"	"45"	"31.000"	"24.000"	"0.000462579378631125"	"21"	"0.0001889"	"0.0005621"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILSNLIPK"	"[K].dILSNLIPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"735.96869"	"1470.93010"	"1470.92959"	"0.35"	"0.00026"	"6/78"	"6"	"78"	"11413498.9528809"	"HCD"	"MS2"	"5.051108"	"348.2"	"58.925"	"66.7137"	"21642"	"21642"	"21625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"537.0"	""	"484.0"	""	"514.0"	""	"550.0"	"2.6"	"580.5"	"626.6"	""	"298"	"45"	"31.000"	"24.000"	"0.000456232551619911"	"21"	"0.0001889"	"0.0006585"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAGSPKPK"	"[R].vAGSPkPk.[I]"	"N-Term(TMT6plex); K6(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.99121"	"1470.95908"	"1470.96111"	"-1.38"	"-0.00068"	"6/60"	"6"	"60"	"13984341.0671997"	"HCD"	"MS2"	"16.77622"	"914.7"	"100.000"	"26.3392"	"5241"	"5241"	"5218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1600.6"	""	"1585.0"	""	"1609.7"	""	"1154.1"	""	"1338.9"	"1349.9"	""	"176"	"3"	"29.000"	"22.000"	"4.4615182328174"	"13"	"0.0004166"	"0.002495"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAGSPKPK"	"[R].vAGSPkPk.[I]"	"N-Term(TMT6plex); K6(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.99139"	"1470.95963"	"1470.96111"	"-1.01"	"-0.00049"	"9/60"	"9"	"60"	"13780382.5148315"	"HCD"	"MS2"	"23.65118"	"886.4"	"100.000"	"26.4181"	"5310"	"5310"	"5286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1561.2"	""	"1493.0"	""	"1581.4"	""	"1148.6"	""	"1280.7"	"1302.3"	""	"176"	"3"	"29.000"	"22.000"	"4.19259268388766"	"13"	"0.0003839"	"0.001595"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42029"	"1471.83330"	"1471.83833"	"-3.42"	"-0.00251"	"10/66"	"10"	"66"	"2838460.53466797"	"HCD"	"MS2"	"56.67902"	"212.0"	"100.000"	"59.8550"	"18894"	"18894"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.2"	""	"260.4"	"2.4"	"266.6"	""	"358.1"	""	"409.4"	"430.2"	""	"771"	"14"	"35.000"	"28.000"	"1.45889616408439"	"13"	"0.0003839"	"0.001857"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.6190"	"0.0000"	"1"	"1"	"1"	"491.28284"	"1471.83396"	"1471.83833"	"-2.97"	"-0.00146"	"8/66"	"8"	"66"	"6492428.04083252"	"HCD"	"MS2"	"78.65565"	"196.0"	"100.000"	"56.4793"	"17520"	"17520"	"17493"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.1"	""	"239.9"	""	"243.4"	""	"297.2"	""	"462.4"	"404.5"	""	"764"	"21"	"35.000"	"28.000"	"0.328899613334518"	"21"	"0.0008731"	"0.009612"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28290"	"1471.83414"	"1471.83833"	"-2.85"	"-0.00140"	"8/66"	"8"	"66"	"197578.780334473"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"86.4172"	"29706"	"29706"	"29684"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.3"	""	"9.5"	""	"9.6"	""	"16.1"	""	"21.0"	"19.0"	""	"764"	"24"	"35.000"	"28.000"	"0.145902711460898"	"14"	"0.0004166"	"0.002516"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.4118"	"0.0000"	"1"	"1"	"1"	"491.28290"	"1471.83414"	"1471.83833"	"-2.85"	"-0.00140"	"9/66"	"9"	"66"	"4028882.07366943"	"HCD"	"MS2"	"84.21423"	"118.2"	"100.000"	"57.3360"	"17816"	"17816"	"17787"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.5"	""	"158.9"	""	"161.0"	""	"170.1"	"0.9"	"245.1"	"253.3"	""	"764"	"17"	"35.000"	"28.000"	"0.695125727989014"	"23"	"0.001966"	"0.02803"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"491.28305"	"1471.83460"	"1471.83833"	"-2.53"	"-0.00124"	"9/66"	"9"	"66"	"263317.416931152"	"HCD"	"MS2"	"65.574"	"9.4"	"100.000"	"86.4531"	"29668"	"29668"	"29643"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.0"	""	"11.5"	""	"8.6"	""	"20.9"	""	"18.5"	"22.0"	""	"756"	"37"	"35.000"	"28.000"	"0.00844290300229941"	"16"	"0.0001889"	"0.0004788"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"736.42102"	"1471.83476"	"1471.83833"	"-2.42"	"-0.00178"	"7/66"	"7"	"66"	"462468.132568359"	"HCD"	"MS2"	"15.1829"	"41.2"	"100.000"	"79.4432"	"26869"	"26869"	"26847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.1"	""	"57.9"	""	"58.7"	""	"67.5"	""	"75.3"	"77.6"	""	"746"	"40"	"35.000"	"28.000"	"0.00401521524683928"	"20"	"7.476E-05"	"0.0001895"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28314"	"1471.83487"	"1471.83833"	"-2.35"	"-0.00115"	"8/66"	"8"	"66"	"2916274.2800293"	"HCD"	"MS2"	"69.3682"	"89.8"	"100.000"	"59.1247"	"18596"	"18596"	"18565"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.1"	""	"114.6"	""	"103.8"	""	"153.8"	"1.3"	"176.6"	"183.5"	""	"746"	"18"	"35.000"	"28.000"	"0.634905123631316"	"14"	"0.000523"	"0.00301"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"736.42108"	"1471.83489"	"1471.83833"	"-2.34"	"-0.00172"	"7/66"	"7"	"66"	"494716.098205566"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"76.8083"	"25794"	"25794"	"25774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.2"	""	"47.5"	""	"50.3"	""	"71.9"	""	"89.6"	"89.0"	""	"746"	"41"	"35.000"	"28.000"	"0.00284255470739478"	"17"	"7.476E-05"	"0.0002"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"736.42108"	"1471.83489"	"1471.83833"	"-2.34"	"-0.00172"	"7/66"	"7"	"66"	"1748301.62402344"	"HCD"	"MS2"	"11.22533"	"137.3"	"100.000"	"60.1701"	"19023"	"19023"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.3"	""	"140.4"	""	"162.1"	""	"262.9"	"4.2"	"272.5"	"303.6"	""	"746"	"41"	"35.000"	"28.000"	"0.00294244823871721"	"22"	"0.0001308"	"0.0002629"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"491.28317"	"1471.83496"	"1471.83833"	"-2.29"	"-0.00112"	"9/66"	"9"	"66"	"457840.543823242"	"HCD"	"MS2"	"18.2159"	"16.9"	"100.000"	"73.7105"	"24542"	"24542"	"24511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"20.5"	""	"25.2"	""	"29.1"	""	"33.7"	"30.3"	""	"746"	"36"	"35.000"	"28.000"	"0.00868378039109048"	"17"	"0.0001889"	"0.0006043"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42126"	"1471.83525"	"1471.83833"	"-2.09"	"-0.00154"	"11/66"	"11"	"66"	"164715.370849609"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"103.4893"	"34945"	"34945"	"34943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"10.4"	""	"12.3"	""	"18.4"	"1.3"	"20.6"	"24.3"	""	"742"	"34"	"35.000"	"28.000"	"0.0152185722208031"	"15"	"0.0001889"	"0.0007457"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"736.42126"	"1471.83525"	"1471.83833"	"-2.09"	"-0.00154"	"7/66"	"7"	"66"	"1167054.7923584"	"HCD"	"MS2"	"0"	"83.6"	"100.000"	"67.4229"	"21925"	"21925"	"21905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.4"	""	"84.9"	""	"106.3"	""	"150.2"	""	"177.4"	"181.0"	""	"742"	"26"	"35.000"	"28.000"	"0.0917009657800984"	"17"	"0.0001889"	"0.0007005"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28336"	"1471.83551"	"1471.83833"	"-1.91"	"-0.00094"	"9/66"	"9"	"66"	"305882.110717773"	"HCD"	"MS2"	"41.19855"	"12.4"	"100.000"	"83.9507"	"28708"	"28708"	"28677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.8"	""	"17.5"	""	"18.8"	""	"22.2"	""	"26.7"	"17.8"	""	"742"	"32"	"35.000"	"28.000"	"0.0213980357918525"	"15"	"0.0001889"	"0.0006017"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28339"	"1471.83561"	"1471.83833"	"-1.85"	"-0.00091"	"8/66"	"8"	"66"	"153267.165283203"	"HCD"	"MS2"	"13.66839"	"6.5"	"100.000"	"93.0630"	"32116"	"32116"	"32107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"6.8"	""	"10.4"	""	"12.6"	""	"12.3"	"12.1"	""	"742"	"29"	"35.000"	"28.000"	"0.044604010524306"	"14"	"0.0001889"	"0.001046"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42145"	"1471.83562"	"1471.83833"	"-1.84"	"-0.00135"	"8/66"	"8"	"66"	"1129262.09802246"	"HCD"	"MS2"	"0"	"78.2"	"100.000"	"67.2178"	"21893"	"21893"	"21881"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.4"	""	"87.8"	""	"89.2"	""	"145.2"	"1.6"	"176.3"	"164.7"	""	"742"	"29"	"35.000"	"28.000"	"0.0418190256241114"	"14"	"0.0001889"	"0.0005726"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42151"	"1471.83574"	"1471.83833"	"-1.76"	"-0.00129"	"5/66"	"5"	"66"	"925617.011352539"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"67.5270"	"22017"	"22017"	"21994"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.6"	""	"82.5"	""	"78.7"	""	"140.5"	"1.6"	"162.6"	"140.3"	""	"742"	"33"	"35.000"	"28.000"	"0.0199698089313543"	"15"	"0.0001889"	"0.0004037"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"736.42157"	"1471.83586"	"1471.83833"	"-1.68"	"-0.00123"	"7/66"	"7"	"66"	"423483.897888184"	"HCD"	"MS2"	"21.22564"	"29.1"	"100.000"	"80.7333"	"27395"	"27395"	"27374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.7"	""	"30.8"	""	"38.8"	""	"51.6"	""	"58.8"	"66.8"	""	"742"	"45"	"35.000"	"28.000"	"0.00109238042613934"	"19"	"0"	"0.0001398"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28348"	"1471.83588"	"1471.83833"	"-1.66"	"-0.00082"	"9/66"	"9"	"66"	"177648.73449707"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"93.9447"	"32375"	"32375"	"32363"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.0"	""	"6.7"	""	"5.9"	""	"9.2"	""	"18.7"	"12.1"	""	"742"	"31"	"35.000"	"28.000"	"0.0296056028976419"	"14"	"0.0001889"	"0.0007565"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"491.28351"	"1471.83597"	"1471.83833"	"-1.60"	"-0.00079"	"8/66"	"8"	"66"	"4950493.92126465"	"HCD"	"MS2"	"56.41194"	"139.7"	"100.000"	"56.5578"	"17498"	"17498"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.4"	""	"157.3"	""	"180.5"	""	"251.0"	"1.2"	"282.6"	"296.3"	""	"742"	"26"	"35.000"	"28.000"	"0.0947052183287323"	"19"	"0.0006037"	"0.003751"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"491.28354"	"1471.83606"	"1471.83833"	"-1.54"	"-0.00076"	"9/66"	"9"	"66"	"264601.618286133"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"84.4440"	"28909"	"28909"	"28881"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.9"	""	"13.4"	""	"12.6"	""	"24.3"	""	"24.3"	"22.7"	""	"713"	"46"	"35.000"	"28.000"	"0.000961744107666615"	"21"	"0.0001889"	"0.0006862"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"491.28354"	"1471.83606"	"1471.83833"	"-1.54"	"-0.00076"	"9/66"	"9"	"66"	"262922.664123535"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"83.5000"	"28473"	"28473"	"28444"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.6"	""	"12.6"	""	"14.5"	""	"17.6"	""	"21.8"	"26.0"	""	"713"	"38"	"35.000"	"28.000"	"0.00532181207014913"	"16"	"0.0001889"	"0.0004835"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28354"	"1471.83606"	"1471.83833"	"-1.54"	"-0.00076"	"7/66"	"7"	"66"	"256139.874694824"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"80.5992"	"27341"	"27341"	"27311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.4"	""	"11.9"	""	"14.2"	""	"20.3"	""	"23.0"	"24.1"	""	"713"	"23"	"35.000"	"28.000"	"0.187957445597236"	"14"	"0.000523"	"0.003289"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"491.28357"	"1471.83615"	"1471.83833"	"-1.48"	"-0.00072"	"9/66"	"9"	"66"	"449323.841552734"	"HCD"	"MS2"	"43.09212"	"15.0"	"100.000"	"78.6401"	"26542"	"26542"	"26511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.6"	""	"17.4"	""	"18.6"	""	"27.2"	""	"31.9"	"33.5"	""	"712"	"37"	"35.000"	"28.000"	"0.00672124920278281"	"24"	"0.0001889"	"0.0006205"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"736.42175"	"1471.83623"	"1471.83833"	"-1.43"	"-0.00105"	"9/66"	"9"	"66"	"201330.467895508"	"HCD"	"MS2"	"30.85332"	"13.1"	"100.000"	"94.3657"	"32550"	"32550"	"32545"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.2"	""	"16.0"	""	"14.3"	""	"25.3"	""	"31.7"	"26.0"	""	"712"	"20"	"35.000"	"28.000"	"0.355181222720829"	"16"	"0.0004166"	"0.002205"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28363"	"1471.83634"	"1471.83833"	"-1.35"	"-0.00066"	"8/66"	"8"	"66"	"715827.844116211"	"HCD"	"MS2"	"22.94886"	"22.9"	"100.000"	"72.1513"	"23854"	"23854"	"23825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.8"	""	"25.6"	""	"29.2"	""	"43.4"	"0.9"	"44.6"	"45.9"	""	"712"	"27"	"35.000"	"28.000"	"0.0728534290673984"	"14"	"0.0002277"	"0.001356"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42181"	"1471.83635"	"1471.83833"	"-1.34"	"-0.00099"	"11/66"	"11"	"66"	"141696.198364258"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"107.8498"	"35729"	"35729"	"35727"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.1"	""	"12.2"	""	"11.2"	""	"19.3"	""	"24.1"	"16.4"	""	"712"	"23"	"35.000"	"28.000"	"0.198358126619767"	"14"	"0.0001889"	"0.0009661"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"736.42181"	"1471.83635"	"1471.83833"	"-1.34"	"-0.00099"	"7/66"	"7"	"66"	"1516827.19769287"	"HCD"	"MS2"	"38.03288"	"121.7"	"100.000"	"67.9646"	"22196"	"22196"	"22170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.1"	""	"141.4"	""	"155.3"	""	"235.2"	"0.9"	"237.9"	"242.6"	""	"712"	"18"	"35.000"	"28.000"	"0.562924301980256"	"16"	"0.0001889"	"0.0009139"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"736.42188"	"1471.83647"	"1471.83833"	"-1.26"	"-0.00093"	"5/66"	"5"	"66"	"2539415.49908447"	"HCD"	"MS2"	"31.74331"	"200.2"	"100.000"	"59.6390"	"18752"	"18752"	"18729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.6"	""	"227.3"	""	"285.6"	""	"357.9"	"1.8"	"370.4"	"421.1"	""	"712"	"30"	"35.000"	"28.000"	"0.039395806709605"	"15"	"0.0001889"	"0.000433"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28369"	"1471.83652"	"1471.83833"	"-1.23"	"-0.00060"	"9/66"	"9"	"66"	"330493.289855957"	"HCD"	"MS2"	"44.66648"	"14.3"	"100.000"	"80.9531"	"27434"	"27434"	"27408"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.0"	""	"18.1"	""	"19.7"	""	"28.9"	""	"25.4"	"30.6"	""	"712"	"33"	"35.000"	"28.000"	"0.0180488692145795"	"15"	"0.0001889"	"0.0008024"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42194"	"1471.83660"	"1471.83833"	"-1.18"	"-0.00087"	"9/66"	"9"	"66"	"150984.628723145"	"HCD"	"MS2"	"10.70715"	"10.2"	"100.000"	"101.7056"	"34563"	"34563"	"34560"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"8.5"	""	"9.5"	""	"22.1"	""	"22.1"	"24.1"	""	"712"	"28"	"35.000"	"28.000"	"0.0604574740276381"	"14"	"0.0001889"	"0.0005738"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42194"	"1471.83660"	"1471.83833"	"-1.18"	"-0.00087"	"10/66"	"10"	"66"	"272885.797607422"	"HCD"	"MS2"	"12.05606"	"19.0"	"100.000"	"87.2738"	"30052"	"30052"	"30031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.8"	""	"18.9"	""	"23.9"	""	"38.6"	""	"35.0"	"45.3"	""	"712"	"28"	"35.000"	"28.000"	"0.06215126864397"	"14"	"0.0004166"	"0.002261"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28375"	"1471.83670"	"1471.83833"	"-1.10"	"-0.00054"	"9/66"	"9"	"66"	"187969.369506836"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"98.9590"	"33876"	"33876"	"33872"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.4"	""	"5.7"	""	"7.8"	""	"16.5"	""	"11.3"	"17.2"	""	"712"	"27"	"35.000"	"28.000"	"0.0716885832951011"	"14"	"0.0001889"	"0.00103"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"491.28375"	"1471.83670"	"1471.83833"	"-1.10"	"-0.00054"	"9/66"	"9"	"66"	"261555.357177734"	"HCD"	"MS2"	"11.38337"	"9.8"	"100.000"	"87.0846"	"29976"	"29976"	"29945"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.3"	""	"9.1"	""	"15.3"	""	"16.0"	""	"21.6"	"23.0"	""	"712"	"40"	"35.000"	"28.000"	"0.00349502267715115"	"16"	"0.0001889"	"0.0004182"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28375"	"1471.83670"	"1471.83833"	"-1.10"	"-0.00054"	"9/66"	"9"	"66"	"26166885.7076416"	"HCD"	"MS2"	"31.9621"	"251.0"	"32.918"	"54.8558"	"16855"	"16855"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.3"	""	"280.5"	""	"315.5"	""	"490.6"	""	"502.9"	"530.5"	""	"712"	"32"	"35.000"	"28.000"	"0.0222049601431742"	"15"	"0.0005564"	"0.003568"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42200"	"1471.83672"	"1471.83833"	"-1.09"	"-0.00081"	"5/66"	"5"	"66"	"111193.107910156"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"112.4583"	"36491"	"36491"	"36489"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"4.3"	""	"7.1"	""	"14.0"	""	"13.9"	"16.0"	""	"712"	"13"	"35.000"	"28.000"	"1.64229056543495"	"13"	"0.005323"	"0.1637"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42200"	"1471.83672"	"1471.83833"	"-1.09"	"-0.00081"	"8/66"	"8"	"66"	"131241.278198242"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"107.3346"	"35639"	"35639"	"35637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.7"	""	"11.1"	""	"11.1"	""	"21.8"	""	"19.1"	"19.9"	""	"712"	"24"	"35.000"	"28.000"	"0.136285608620789"	"14"	"0.000523"	"0.003243"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42200"	"1471.83672"	"1471.83833"	"-1.09"	"-0.00081"	"5/66"	"5"	"66"	"138739.598266602"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"103.7476"	"35005"	"35005"	"35003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.4"	""	"12.9"	""	"8.4"	""	"24.1"	""	"25.3"	"15.9"	""	"712"	"18"	"35.000"	"28.000"	"0.578695357047173"	"14"	"0.0007076"	"0.006817"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"736.42200"	"1471.83672"	"1471.83833"	"-1.09"	"-0.00081"	"7/66"	"7"	"66"	"465238.661804199"	"HCD"	"MS2"	"24.47713"	"40.4"	"100.000"	"78.0287"	"26292"	"26292"	"26271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.2"	""	"46.7"	""	"54.9"	""	"71.9"	""	"79.4"	"84.7"	""	"712"	"40"	"35.000"	"28.000"	"0.00335312696362132"	"21"	"0.0001308"	"0.0002443"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42200"	"1471.83672"	"1471.83833"	"-1.09"	"-0.00081"	"8/66"	"8"	"66"	"208705.177429199"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"95.8334"	"32985"	"32985"	"32977"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"13.4"	""	"15.9"	""	"24.5"	"1.4"	"21.3"	"36.8"	""	"712"	"45"	"35.000"	"28.000"	"0.00111544971785635"	"15"	"0"	"8.475E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42200"	"1471.83672"	"1471.83833"	"-1.09"	"-0.00081"	"7/66"	"7"	"66"	"620103.529602051"	"HCD"	"MS2"	"0"	"49.2"	"100.000"	"71.7999"	"23710"	"23710"	"23683"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.0"	""	"52.0"	""	"68.9"	""	"91.3"	"0.2"	"109.1"	"98.9"	""	"712"	"40"	"35.000"	"28.000"	"0.00330712033693657"	"15"	"0.0001308"	"0.000286"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"491.28378"	"1471.83680"	"1471.83833"	"-1.04"	"-0.00051"	"9/66"	"9"	"66"	"172521.98614502"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"99.4855"	"34026"	"34026"	"34020"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"5.0"	""	"7.9"	""	"13.8"	""	"14.2"	"10.6"	""	"712"	"34"	"35.000"	"28.000"	"0.0136599779395251"	"20"	"0.0001889"	"0.0007759"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"491.28378"	"1471.83680"	"1471.83833"	"-1.04"	"-0.00051"	"10/66"	"10"	"66"	"1148670520.92188"	"HCD"	"MS2"	"4.221185"	"301.9"	"0.961"	"53.1555"	"16125"	"16125"	"16119"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"275.6"	""	"283.1"	""	"345.9"	""	"656.7"	"0.1"	"638.6"	"671.3"	""	"712"	"40"	"35.000"	"28.000"	"0.00319484650842267"	"17"	"0.001846"	"0.0263"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"491.28378"	"1471.83680"	"1471.83833"	"-1.04"	"-0.00051"	"10/66"	"10"	"66"	"978335994.414063"	"HCD"	"MS2"	"3.804521"	"302.0"	"1.160"	"53.4156"	"16223"	"16223"	"16217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.5"	""	"295.7"	""	"338.2"	""	"640.5"	""	"659.9"	"669.8"	""	"712"	"45"	"35.000"	"28.000"	"0.00118154426888729"	"18"	"0.00119"	"0.01625"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42206"	"1471.83684"	"1471.83833"	"-1.01"	"-0.00074"	"9/66"	"9"	"66"	"136444.251403809"	"HCD"	"MS2"	"7.072986"	"10.0"	"100.000"	"95.5715"	"32916"	"32916"	"32911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"8.6"	""	"12.7"	""	"20.4"	""	"23.3"	"24.1"	""	"712"	"29"	"35.000"	"28.000"	"0.0403134529311858"	"15"	"0.0002277"	"0.001137"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"736.42206"	"1471.83684"	"1471.83833"	"-1.01"	"-0.00074"	"5/66"	"5"	"66"	"126517.228881836"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"111.4196"	"36334"	"36334"	"36331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.2"	""	"6.5"	""	"7.9"	""	"16.0"	""	"18.0"	"16.2"	""	"712"	"19"	"35.000"	"28.000"	"0.499401678824057"	"14"	"0.0006037"	"0.005817"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42206"	"1471.83684"	"1471.83833"	"-1.01"	"-0.00074"	"9/66"	"9"	"66"	"169707.22265625"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"93.5687"	"32279"	"32279"	"32271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.2"	""	"7.9"	""	"11.5"	""	"28.6"	""	"29.9"	"32.8"	""	"712"	"27"	"35.000"	"28.000"	"0.0676783867652695"	"14"	"0.0001889"	"0.0004794"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42206"	"1471.83684"	"1471.83833"	"-1.01"	"-0.00074"	"5/66"	"5"	"66"	"207948.172302246"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"94.1032"	"32453"	"32453"	"32442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.3"	""	"14.9"	""	"14.3"	""	"29.7"	"1.7"	"24.5"	"27.6"	""	"712"	"20"	"35.000"	"28.000"	"0.360952453322258"	"14"	"0.0001889"	"0.001082"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"736.42206"	"1471.83684"	"1471.83833"	"-1.01"	"-0.00074"	"10/66"	"10"	"66"	"222027.932739258"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"90.8699"	"31380"	"31380"	"31369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.2"	""	"16.0"	""	"20.0"	""	"28.3"	""	"23.6"	"33.0"	""	"712"	"34"	"35.000"	"28.000"	"0.0155757869436338"	"17"	"0.0001889"	"0.0006389"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42206"	"1471.83684"	"1471.83833"	"-1.01"	"-0.00074"	"7/66"	"7"	"66"	"1620554.12542725"	"HCD"	"MS2"	"9.62133"	"122.8"	"100.000"	"61.4544"	"19547"	"19547"	"19523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.0"	""	"146.2"	""	"147.3"	""	"244.4"	""	"242.0"	"263.0"	""	"712"	"39"	"35.000"	"28.000"	"0.0047802432616508"	"15"	"0.0001889"	"0.0004464"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42212"	"1471.83696"	"1471.83833"	"-0.93"	"-0.00068"	"5/66"	"5"	"66"	"129836.895019531"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"119.9052"	"37730"	"37730"	"37728"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"3.6"	""	"7.0"	""	"16.1"	""	"17.3"	"16.4"	""	"708"	"12"	"35.000"	"28.000"	"2.04175328040857"	"13"	"0.0003839"	"0.001753"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42212"	"1471.83696"	"1471.83833"	"-0.93"	"-0.00068"	"5/66"	"5"	"66"	"169333.099365234"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"91.6801"	"31655"	"31655"	"31650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.8"	""	"12.7"	""	"13.0"	""	"29.3"	""	"29.7"	"29.8"	""	"708"	"22"	"35.000"	"28.000"	"0.21281550306908"	"14"	"0.0003839"	"0.001619"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42212"	"1471.83696"	"1471.83833"	"-0.93"	"-0.00068"	"5/66"	"5"	"66"	"139870.485900879"	"HCD"	"MS2"	"5.177218"	"9.4"	"100.000"	"107.0758"	"35595"	"35595"	"35593"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.5"	""	"8.4"	""	"9.5"	""	"22.3"	""	"20.3"	"17.9"	""	"708"	"18"	"35.000"	"28.000"	"0.590205513243076"	"14"	"0.0006037"	"0.004329"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"736.42212"	"1471.83696"	"1471.83833"	"-0.93"	"-0.00068"	"9/66"	"9"	"66"	"147435.620910645"	"HCD"	"MS2"	"4.874544"	"10.4"	"100.000"	"103.3343"	"34909"	"34909"	"34905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"10.8"	""	"12.1"	""	"21.0"	""	"21.0"	"26.6"	""	"708"	"29"	"35.000"	"28.000"	"0.0492043231449527"	"17"	"0.0001889"	"0.001093"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42212"	"1471.83696"	"1471.83833"	"-0.93"	"-0.00068"	"11/66"	"11"	"66"	"302665.00189209"	"HCD"	"MS2"	"29.97793"	"21.8"	"100.000"	"86.5595"	"29711"	"29711"	"29689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.1"	""	"25.0"	""	"24.8"	""	"39.0"	"0.4"	"47.1"	"46.5"	""	"708"	"31"	"35.000"	"28.000"	"0.0306904504018409"	"14"	"0.0001889"	"0.0005885"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"736.42212"	"1471.83696"	"1471.83833"	"-0.93"	"-0.00068"	"7/66"	"7"	"66"	"1866657.18701172"	"HCD"	"MS2"	"12.17575"	"132.0"	"100.000"	"60.8231"	"19289"	"19289"	"19267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.3"	""	"139.2"	""	"160.8"	""	"228.5"	""	"294.4"	"285.7"	""	"708"	"39"	"35.000"	"28.000"	"0.00480842960091852"	"20"	"0.0001889"	"0.0005208"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28387"	"1471.83707"	"1471.83833"	"-0.85"	"-0.00042"	"9/66"	"9"	"66"	"231273.759460449"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"84.9213"	"29103"	"29103"	"29074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"8.8"	""	"13.5"	""	"21.1"	""	"19.1"	"29.7"	""	"713"	"33"	"35.000"	"28.000"	"0.0189260304368347"	"15"	"0.0001889"	"0.0004621"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28387"	"1471.83707"	"1471.83833"	"-0.85"	"-0.00042"	"9/66"	"9"	"66"	"184483.113586426"	"HCD"	"MS2"	"9.705079"	"5.5"	"100.000"	"97.5874"	"33493"	"33493"	"33489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"7.3"	""	"6.5"	""	"9.9"	""	"12.7"	"11.4"	""	"713"	"27"	"35.000"	"28.000"	"0.0659264262665685"	"15"	"0.0001889"	"0.0004712"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"491.28387"	"1471.83707"	"1471.83833"	"-0.85"	"-0.00042"	"10/66"	"10"	"66"	"1277303372.99219"	"HCD"	"MS2"	"3.582943"	"330.4"	"0.995"	"53.3426"	"16252"	"16252"	"16247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"321.3"	""	"317.2"	""	"377.0"	""	"695.7"	""	"713.9"	"718.9"	""	"713"	"43"	"35.000"	"28.000"	"0.00186234241378186"	"17"	"0.002829"	"0.04691"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"491.28387"	"1471.83707"	"1471.83833"	"-0.85"	"-0.00042"	"7/66"	"7"	"66"	"3903238.67224121"	"HCD"	"MS2"	"46.21993"	"115.3"	"100.000"	"58.6241"	"18343"	"18343"	"18313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.3"	""	"127.2"	""	"155.4"	""	"197.9"	"1.0"	"226.2"	"230.3"	""	"713"	"23"	"35.000"	"28.000"	"0.176627993021908"	"15"	"0.0005564"	"0.003604"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"491.28387"	"1471.83707"	"1471.83833"	"-0.85"	"-0.00042"	"8/66"	"8"	"66"	"9901210.61657715"	"HCD"	"MS2"	"21.54463"	"273.7"	"100.000"	"55.1731"	"16985"	"16985"	"16965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.1"	""	"283.1"	""	"330.1"	""	"526.1"	"2.4"	"570.1"	"599.2"	""	"713"	"27"	"35.000"	"28.000"	"0.0716241587695012"	"17"	"0.0002277"	"0.001334"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"736.42218"	"1471.83708"	"1471.83833"	"-0.85"	"-0.00062"	"10/66"	"10"	"66"	"170171.067993164"	"HCD"	"MS2"	"35.83204"	"11.2"	"100.000"	"100.4270"	"34275"	"34275"	"34273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.1"	""	"10.9"	""	"12.1"	""	"23.3"	""	"25.6"	"25.3"	""	"713"	"31"	"35.000"	"28.000"	"0.0298579189078234"	"15"	"0.0002277"	"0.001316"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"736.42218"	"1471.83708"	"1471.83833"	"-0.85"	"-0.00062"	"10/66"	"10"	"66"	"154216.500793457"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"93.0539"	"32112"	"32112"	"32107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.9"	""	"12.7"	""	"16.2"	""	"22.5"	""	"21.0"	"23.9"	""	"713"	"44"	"35.000"	"28.000"	"0.00139977919469957"	"18"	"0.0001889"	"0.0004217"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"736.42218"	"1471.83708"	"1471.83833"	"-0.85"	"-0.00062"	"11/66"	"11"	"66"	"269202.247680664"	"HCD"	"MS2"	"14.83635"	"21.9"	"100.000"	"84.8246"	"29063"	"29063"	"29042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.8"	""	"19.5"	""	"26.8"	""	"43.4"	"0.7"	"46.8"	"44.0"	""	"713"	"44"	"35.000"	"28.000"	"0.00155617894193619"	"18"	"0.0001308"	"0.0002823"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28391"	"1471.83716"	"1471.83833"	"-0.79"	"-0.00039"	"9/66"	"9"	"66"	"268888.840759277"	"HCD"	"MS2"	"18.02455"	"10.7"	"100.000"	"86.0110"	"29542"	"29542"	"29513"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"11.6"	""	"14.3"	""	"19.7"	""	"17.8"	"24.5"	""	"713"	"31"	"35.000"	"28.000"	"0.026857125847107"	"14"	"0.0001889"	"0.0005212"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"491.28391"	"1471.83716"	"1471.83833"	"-0.79"	"-0.00039"	"10/66"	"10"	"66"	"805363678.296875"	"HCD"	"MS2"	"4.468234"	"299.4"	"1.428"	"53.9037"	"16469"	"16469"	"16457"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"273.0"	""	"271.6"	""	"344.2"	""	"615.0"	"1.8"	"665.9"	"677.5"	""	"713"	"45"	"35.000"	"28.000"	"0.00120797941663626"	"17"	"0.0008453"	"0.008251"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28391"	"1471.83716"	"1471.83833"	"-0.79"	"-0.00039"	"9/66"	"9"	"66"	"8015476.4710083"	"HCD"	"MS2"	"24.8172"	"216.0"	"100.000"	"58.3890"	"18300"	"18300"	"18277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.9"	""	"225.6"	""	"280.5"	""	"410.6"	""	"449.6"	"453.3"	""	"713"	"32"	"35.000"	"28.000"	"0.0251802208094746"	"14"	"0.0001889"	"0.0008034"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42224"	"1471.83721"	"1471.83833"	"-0.76"	"-0.00056"	"10/66"	"10"	"66"	"135598.903320313"	"HCD"	"MS2"	"7.283541"	"9.0"	"100.000"	"104.2563"	"35101"	"35101"	"35097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"10.4"	""	"6.6"	""	"22.2"	""	"14.9"	"24.6"	""	"713"	"36"	"35.000"	"28.000"	"0.00972880579571067"	"15"	"0.0001889"	"0.0004047"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42224"	"1471.83721"	"1471.83833"	"-0.76"	"-0.00056"	"5/66"	"5"	"66"	"106655.620483398"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"113.4821"	"36644"	"36644"	"36642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"7.1"	""	"6.8"	""	"12.5"	""	"16.0"	"12.2"	""	"713"	"21"	"35.000"	"28.000"	"0.306238320416674"	"14"	"0.0006037"	"0.004213"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"736.42224"	"1471.83721"	"1471.83833"	"-0.76"	"-0.00056"	"10/66"	"10"	"66"	"149337.966247559"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"101.9591"	"34622"	"34622"	"34619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.5"	""	"8.7"	""	"12.8"	""	"20.9"	""	"19.9"	"18.1"	""	"713"	"30"	"35.000"	"28.000"	"0.0382877225499654"	"21"	"0.0002277"	"0.001122"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"736.42224"	"1471.83721"	"1471.83833"	"-0.76"	"-0.00056"	"6/66"	"6"	"66"	"209788.964904785"	"HCD"	"MS2"	"33.31371"	"13.7"	"100.000"	"94.2415"	"32487"	"32487"	"32481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.2"	""	"11.6"	""	"17.1"	""	"33.5"	""	"31.6"	"25.9"	""	"713"	"31"	"35.000"	"28.000"	"0.026857125847107"	"17"	"0.0001889"	"0.0005839"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42224"	"1471.83721"	"1471.83833"	"-0.76"	"-0.00056"	"9/66"	"9"	"66"	"165529.198486328"	"HCD"	"MS2"	"5.28907"	"10.5"	"100.000"	"97.4693"	"33458"	"33458"	"33453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"9.9"	""	"12.6"	""	"17.0"	""	"26.3"	"23.9"	""	"713"	"26"	"35.000"	"28.000"	"0.0875103728441713"	"14"	"0.0003839"	"0.002047"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42224"	"1471.83721"	"1471.83833"	"-0.76"	"-0.00056"	"9/66"	"9"	"66"	"189316.936767578"	"HCD"	"MS2"	"9.458282"	"12.4"	"100.000"	"91.9390"	"31743"	"31743"	"31736"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"17.6"	""	"12.3"	""	"24.9"	""	"29.6"	"22.8"	""	"713"	"31"	"35.000"	"28.000"	"0.0279936503738491"	"15"	"0.0002723"	"0.001395"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"736.42224"	"1471.83721"	"1471.83833"	"-0.76"	"-0.00056"	"10/66"	"10"	"66"	"286686.448059082"	"HCD"	"MS2"	"63.25922"	"12.8"	"100.000"	"95.0546"	"32769"	"32769"	"32763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.3"	""	"11.4"	""	"15.1"	""	"26.4"	""	"27.0"	"30.0"	""	"713"	"21"	"35.000"	"28.000"	"0.25589366483824"	"18"	"0.000523"	"0.003107"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"491.28394"	"1471.83725"	"1471.83833"	"-0.73"	"-0.00036"	"9/66"	"9"	"66"	"270548.33026123"	"HCD"	"MS2"	"23.42255"	"11.4"	"100.000"	"83.0766"	"28300"	"28300"	"28272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"8.3"	""	"14.1"	""	"27.1"	""	"22.5"	"24.1"	""	"713"	"34"	"35.000"	"28.000"	"0.0129139628935553"	"15"	"0.0001308"	"0.0002685"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"491.28394"	"1471.83725"	"1471.83833"	"-0.73"	"-0.00036"	"10/66"	"10"	"66"	"1287139394.49609"	"HCD"	"MS2"	"4.51435"	"338.9"	"1.020"	"53.6105"	"16356"	"16356"	"16345"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"304.0"	""	"319.3"	""	"360.4"	""	"736.9"	"2.0"	"756.5"	"745.6"	""	"713"	"43"	"35.000"	"28.000"	"0.00200013603455576"	"17"	"0.001217"	"0.01869"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"9/66"	"9"	"66"	"119548.248168945"	"HCD"	"MS2"	"6.840293"	"7.8"	"100.000"	"110.9130"	"36252"	"36252"	"36250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.1"	""	"5.6"	""	"8.7"	""	"19.3"	""	"15.9"	"17.1"	""	"713"	"23"	"35.000"	"28.000"	"0.195011190771701"	"14"	"0.0001889"	"0.0007819"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"10/66"	"10"	"66"	"158247.685241699"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"100.6842"	"34329"	"34329"	"34325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.4"	""	"14.8"	""	"13.0"	""	"21.2"	""	"30.2"	"25.3"	""	"713"	"34"	"35.000"	"28.000"	"0.0130334543210079"	"21"	"0.0001889"	"0.0004054"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"10/66"	"10"	"66"	"129843.893554688"	"HCD"	"MS2"	"4.098568"	"8.3"	"100.000"	"108.3569"	"35822"	"35822"	"35820"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"7.4"	""	"11.6"	""	"17.5"	""	"17.6"	"16.9"	""	"713"	"33"	"35.000"	"28.000"	"0.0199553584933007"	"15"	"0.0001889"	"0.0004751"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"10/66"	"10"	"66"	"168989.994262695"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"90.5908"	"31284"	"31284"	"31273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.1"	""	"13.5"	""	"14.7"	""	"25.6"	""	"24.7"	"28.2"	""	"713"	"27"	"35.000"	"28.000"	"0.0785343284078558"	"14"	"0.0001889"	"0.0005221"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"4/66"	"4"	"66"	"159139.303405762"	"HCD"	"MS2"	"6.244794"	"13.2"	"100.000"	"90.3160"	"31185"	"31185"	"31178"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.0"	""	"13.9"	""	"13.5"	""	"25.1"	""	"29.2"	"30.8"	""	"713"	"26"	"35.000"	"28.000"	"0.0993252196616514"	"19"	"0.0003146"	"0.001453"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"9/66"	"9"	"66"	"160900.295715332"	"HCD"	"MS2"	"7.086228"	"10.8"	"100.000"	"101.4475"	"34508"	"34508"	"34504"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.2"	""	"11.2"	""	"13.5"	""	"22.8"	"1.3"	"22.3"	"19.5"	""	"713"	"24"	"35.000"	"28.000"	"0.140948200054288"	"14"	"0.0003839"	"0.00159"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"9/66"	"9"	"66"	"147353.214660645"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"116.5705"	"37154"	"37154"	"37152"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"9.6"	""	"6.9"	""	"21.6"	""	"17.0"	"18.3"	""	"713"	"20"	"35.000"	"28.000"	"0.341239686416612"	"14"	"0.0003839"	"0.001724"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"9/66"	"9"	"66"	"150302.847900391"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"106.8182"	"35551"	"35551"	"35549"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.5"	""	"9.3"	""	"8.3"	""	"19.0"	""	"18.5"	"23.5"	""	"713"	"22"	"35.000"	"28.000"	"0.210406685081263"	"17"	"0.0002277"	"0.001358"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"4/66"	"4"	"66"	"143041.204284668"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"117.3360"	"37285"	"37285"	"37283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.0"	""	"6.5"	""	"7.7"	""	"17.1"	""	"12.4"	"18.1"	""	"713"	"15"	"35.000"	"28.000"	"1.17235606407288"	"13"	"0.0009727"	"0.01042"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"11/66"	"11"	"66"	"195792.098571777"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"97.1975"	"33382"	"33382"	"33375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.7"	""	"12.2"	""	"16.1"	""	"25.8"	""	"23.7"	"26.4"	""	"713"	"28"	"35.000"	"28.000"	"0.0620954150364111"	"16"	"0.0001889"	"0.0003979"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"9/66"	"9"	"66"	"138322.698486328"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"111.6781"	"36373"	"36373"	"36371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"8.2"	""	"6.1"	""	"17.0"	""	"20.4"	"19.8"	""	"713"	"25"	"35.000"	"28.000"	"0.105210608930657"	"14"	"0.0002277"	"0.001283"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"7/66"	"7"	"66"	"1156759.2243042"	"HCD"	"MS2"	"26.69062"	"96.0"	"100.000"	"64.2547"	"20637"	"20637"	"20617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.9"	""	"105.5"	""	"113.7"	""	"172.1"	"3.9"	"199.6"	"200.9"	""	"713"	"41"	"35.000"	"28.000"	"0.00261854193998011"	"21"	"0.0001308"	"0.0003079"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"7/66"	"7"	"66"	"1186674.57592773"	"HCD"	"MS2"	"25.46728"	"89.2"	"100.000"	"63.6904"	"20460"	"20460"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.8"	""	"90.1"	""	"119.0"	""	"153.4"	""	"191.8"	"194.2"	""	"713"	"40"	"35.000"	"28.000"	"0.00322893672220209"	"21"	"0.0001889"	"0.0005679"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"8/66"	"8"	"66"	"1324876.52032471"	"HCD"	"MS2"	"30.88518"	"61.4"	"100.000"	"69.1109"	"22664"	"22664"	"22634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.6"	""	"68.5"	""	"73.2"	""	"119.2"	"1.8"	"125.6"	"126.6"	""	"713"	"10"	"35.000"	"28.000"	"3.89098479943982"	"13"	"0.000523"	"0.002888"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"736.42230"	"1471.83733"	"1471.83833"	"-0.68"	"-0.00050"	"7/66"	"7"	"66"	"13187870.7258301"	"HCD"	"MS2"	"14.34868"	"520.3"	"59.588"	"55.2095"	"17000"	"17000"	"16981"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"565.6"	""	"548.7"	""	"649.3"	""	"1009.0"	"6.4"	"1053.7"	"1110.0"	""	"713"	"39"	"35.000"	"28.000"	"0.00412154014341484"	"20"	"0.0001889"	"0.000446"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"9/66"	"9"	"66"	"133294.083007813"	"HCD"	"MS2"	"4.018531"	"9.2"	"100.000"	"103.9990"	"35051"	"35051"	"35049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"7.7"	""	"12.3"	""	"22.2"	""	"19.3"	"17.1"	""	"711"	"21"	"35.000"	"28.000"	"0.266587391417688"	"14"	"0.0002277"	"0.001298"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"8/66"	"8"	"66"	"111958.017150879"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"111.1686"	"36295"	"36295"	"36292"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.8"	""	"6.6"	""	"11.2"	""	"19.7"	""	"17.2"	"17.3"	""	"711"	"11"	"35.000"	"28.000"	"2.61721623159379"	"13"	"0.0006037"	"0.005587"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"4/66"	"4"	"66"	"122905.19140625"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"117.0789"	"37240"	"37240"	"37237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"4.9"	""	"6.6"	""	"16.0"	""	"15.6"	"14.2"	""	"711"	"13"	"35.000"	"28.000"	"1.66663157352642"	"13"	"0.0006037"	"0.006169"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"9/66"	"9"	"66"	"125698.047424316"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"104.5143"	"35150"	"35150"	"35148"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	"8.5"	""	"12.5"	""	"17.7"	""	"14.6"	"17.5"	""	"711"	"33"	"35.000"	"28.000"	"0.0199452555479543"	"19"	"0.0001889"	"0.0008076"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"9/66"	"9"	"66"	"153545.085266113"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"100.0384"	"34186"	"34186"	"34183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.1"	""	"7.4"	""	"12.6"	""	"27.6"	""	"23.3"	"27.3"	""	"711"	"30"	"35.000"	"28.000"	"0.0322730198478345"	"18"	"0.0002277"	"0.001188"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"9/66"	"9"	"66"	"148306.214172363"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"99.2644"	"33963"	"33963"	"33959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.5"	""	"10.6"	""	"13.1"	""	"20.9"	""	"22.6"	"24.6"	""	"711"	"23"	"35.000"	"28.000"	"0.167432439534117"	"15"	"0.0001889"	"0.0008966"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"10/66"	"10"	"66"	"142930.835693359"	"HCD"	"MS2"	"4.29147"	"9.8"	"100.000"	"102.2124"	"34674"	"34674"	"34670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.6"	""	"9.4"	""	"13.5"	""	"15.1"	""	"24.7"	"18.1"	""	"711"	"29"	"35.000"	"28.000"	"0.042740500650649"	"15"	"0.0001889"	"0.001013"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"9/66"	"9"	"66"	"145505.311035156"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"105.0328"	"35245"	"35245"	"35242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.5"	""	"9.9"	""	"13.4"	""	"15.9"	""	"19.3"	"19.4"	""	"711"	"23"	"35.000"	"28.000"	"0.190475711745993"	"14"	"0.0004166"	"0.002252"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"9/66"	"9"	"66"	"142616.879638672"	"HCD"	"MS2"	"24.49022"	"7.1"	"100.000"	"119.1333"	"37595"	"37595"	"37593"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"6.3"	""	"8.7"	""	"17.1"	""	"16.6"	"11.9"	""	"711"	"19"	"35.000"	"28.000"	"0.42937781838046"	"14"	"0.0003839"	"0.001649"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"9/66"	"9"	"66"	"162941.900695801"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"115.8042"	"37022"	"37022"	"37019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"8.7"	""	"8.4"	""	"16.0"	""	"13.7"	"16.9"	""	"711"	"29"	"35.000"	"28.000"	"0.0494128160396347"	"14"	"0.0003839"	"0.001545"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"11/66"	"11"	"66"	"177469.61920166"	"HCD"	"MS2"	"5.429359"	"12.4"	"100.000"	"93.3097"	"32197"	"32197"	"32191"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.1"	""	"13.5"	""	"15.5"	""	"24.5"	""	"26.9"	"26.7"	""	"711"	"30"	"35.000"	"28.000"	"0.0341066924503914"	"20"	"0.0001889"	"0.0005948"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"9/66"	"9"	"66"	"148395.227966309"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"110.1499"	"36131"	"36131"	"36129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"7.2"	""	"8.0"	""	"16.2"	""	"19.0"	"19.6"	""	"711"	"28"	"35.000"	"28.000"	"0.0629273734681843"	"14"	"0.0002277"	"0.001125"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"10/66"	"10"	"66"	"192106.788330078"	"HCD"	"MS2"	"46.26263"	"11.3"	"100.000"	"100.2547"	"34213"	"34213"	"34211"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.8"	""	"13.2"	""	"11.0"	""	"18.8"	""	"26.2"	"32.3"	""	"711"	"31"	"35.000"	"28.000"	"0.0316839708506547"	"14"	"0.0002277"	"0.001167"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"7/66"	"7"	"66"	"408402.725402832"	"HCD"	"MS2"	"37.66428"	"33.9"	"100.000"	"79.1382"	"26745"	"26745"	"26719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.3"	""	"35.7"	""	"45.6"	""	"65.8"	""	"67.1"	"74.0"	""	"711"	"48"	"35.000"	"28.000"	"0.000571267615446078"	"23"	"0"	"9.998E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"7/66"	"7"	"66"	"393878.837768555"	"HCD"	"MS2"	"0"	"32.8"	"100.000"	"78.6409"	"26491"	"26491"	"26465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.2"	""	"36.9"	""	"44.5"	""	"56.8"	"1.1"	"68.8"	"70.0"	""	"711"	"36"	"35.000"	"28.000"	"0.00820048625589985"	"16"	"0.0001889"	"0.0004221"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42236"	"1471.83745"	"1471.83833"	"-0.60"	"-0.00044"	"7/66"	"7"	"66"	"1798981.59906006"	"HCD"	"MS2"	"14.65279"	"134.3"	"100.000"	"60.6549"	"19167"	"19167"	"19145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"138.6"	""	"142.0"	""	"160.8"	""	"245.2"	""	"300.2"	"290.2"	""	"711"	"39"	"35.000"	"28.000"	"0.00483993584616646"	"15"	"0.0001889"	"0.0004273"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28400"	"1471.83744"	"1471.83833"	"-0.61"	"-0.00030"	"9/66"	"9"	"66"	"270529.630859375"	"HCD"	"MS2"	"17.29279"	"10.9"	"100.000"	"85.7825"	"29398"	"29398"	"29368"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.8"	""	"9.1"	""	"12.4"	""	"30.5"	""	"20.1"	"22.8"	""	"711"	"34"	"35.000"	"28.000"	"0.013086985012992"	"15"	"0.0001889"	"0.0004122"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28403"	"1471.83753"	"1471.83833"	"-0.54"	"-0.00027"	"7/66"	"7"	"66"	"4153900.4697876"	"HCD"	"MS2"	"41.72021"	"122.1"	"100.000"	"58.7854"	"18458"	"18458"	"18437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.9"	""	"141.8"	""	"154.9"	""	"236.4"	"0.3"	"236.7"	"240.7"	""	"711"	"22"	"35.000"	"28.000"	"0.241456891395409"	"14"	"0.0006037"	"0.003875"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"4/66"	"4"	"66"	"112460.206970215"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"114.7689"	"36846"	"36846"	"36844"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.6"	""	"5.0"	""	"7.7"	""	"12.6"	""	"17.7"	"12.0"	""	"711"	"17"	"35.000"	"28.000"	"0.767078137453773"	"14"	"0.0006037"	"0.005944"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"11/66"	"11"	"66"	"153514.707214355"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"99.3549"	"33988"	"33988"	"33982"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.5"	""	"10.2"	""	"10.4"	""	"26.1"	""	"21.2"	"27.6"	""	"711"	"48"	"35.000"	"28.000"	"0.000607910444514597"	"18"	"0"	"0.0001795"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"7/66"	"7"	"66"	"156382.317993164"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"98.2338"	"33674"	"33674"	"33671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.5"	""	"10.3"	""	"11.1"	""	"21.9"	""	"23.9"	"22.5"	""	"711"	"23"	"35.000"	"28.000"	"0.168205272560806"	"14"	"0.0003839"	"0.001628"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"7/66"	"7"	"66"	"157874.312255859"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"99.0958"	"33910"	"33910"	"33908"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"11.2"	""	"13.7"	""	"23.6"	""	"19.8"	"25.2"	""	"711"	"26"	"35.000"	"28.000"	"0.0937215807660923"	"14"	"0.0003839"	"0.001945"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"10/66"	"10"	"66"	"155291.005004883"	"HCD"	"MS2"	"15.96457"	"12.3"	"100.000"	"89.2286"	"30783"	"30783"	"30774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.2"	""	"11.0"	""	"14.6"	""	"27.1"	""	"25.7"	"27.3"	""	"711"	"33"	"35.000"	"28.000"	"0.0199452555479543"	"15"	"0.0001889"	"0.0004061"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"9/66"	"9"	"66"	"186531.889892578"	"HCD"	"MS2"	"13.87872"	"13.7"	"100.000"	"88.3995"	"30479"	"30479"	"30469"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.1"	""	"14.8"	""	"17.5"	""	"24.5"	"1.8"	"27.9"	"28.8"	""	"711"	"23"	"35.000"	"28.000"	"0.173715913746377"	"20"	"0.0003839"	"0.001838"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"10/66"	"10"	"66"	"211125.320739746"	"HCD"	"MS2"	"7.14218"	"15.2"	"100.000"	"91.4193"	"31576"	"31576"	"31566"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.6"	""	"13.7"	""	"17.8"	""	"28.4"	""	"36.4"	"35.6"	""	"711"	"37"	"35.000"	"28.000"	"0.00677391285235934"	"17"	"0.0001889"	"0.000413"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"4/66"	"4"	"66"	"155156.37109375"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"119.6505"	"37686"	"37686"	"37684"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"7.7"	""	"8.9"	""	"14.4"	""	"11.8"	"16.1"	""	"711"	"12"	"35.000"	"28.000"	"2.08852464824336"	"13"	"0.001058"	"0.01377"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"9/66"	"9"	"66"	"175476.46673584"	"HCD"	"MS2"	"8.394883"	"11.7"	"100.000"	"95.6983"	"32929"	"32929"	"32927"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.8"	""	"10.6"	""	"13.6"	""	"25.1"	""	"23.2"	"27.8"	""	"711"	"22"	"35.000"	"28.000"	"0.249942209718703"	"14"	"0.0004166"	"0.00225"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"10/66"	"10"	"66"	"416415.134338379"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"78.0113"	"26234"	"26234"	"26215"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.6"	""	"37.4"	""	"46.1"	""	"62.8"	"0.6"	"74.8"	"75.6"	""	"711"	"31"	"35.000"	"28.000"	"0.02759558499615"	"15"	"0.0003146"	"0.001397"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"736.42242"	"1471.83757"	"1471.83833"	"-0.51"	"-0.00038"	"7/66"	"7"	"66"	"1256991.52301025"	"HCD"	"MS2"	"31.23319"	"103.0"	"100.000"	"62.8404"	"20113"	"20113"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.9"	""	"114.8"	""	"125.3"	""	"216.0"	"0.1"	"199.2"	"211.8"	""	"711"	"42"	"35.000"	"28.000"	"0.00206461750428826"	"19"	"0.0001308"	"0.0002606"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"491.28406"	"1471.83762"	"1471.83833"	"-0.48"	"-0.00024"	"9/66"	"9"	"66"	"1242088.7119751"	"HCD"	"MS2"	"17.74416"	"46.5"	"100.000"	"61.3001"	"19431"	"19431"	"19401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.1"	""	"52.6"	""	"59.2"	""	"88.5"	""	"100.4"	"97.5"	""	"711"	"33"	"35.000"	"28.000"	"0.0190914803609625"	"17"	"0.0001889"	"0.001031"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"491.28406"	"1471.83762"	"1471.83833"	"-0.48"	"-0.00024"	"10/66"	"10"	"66"	"716362096.601563"	"HCD"	"MS2"	"4.824978"	"352.4"	"1.862"	"53.9606"	"16436"	"16436"	"16425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.7"	""	"323.2"	""	"387.9"	""	"741.7"	""	"808.5"	"783.0"	""	"711"	"45"	"35.000"	"28.000"	"0.0011935472186337"	"17"	"0.001058"	"0.01457"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"491.28406"	"1471.83762"	"1471.83833"	"-0.48"	"-0.00024"	"9/66"	"9"	"66"	"12168381.0358887"	"HCD"	"MS2"	"21.21062"	"329.3"	"100.000"	"54.8472"	"16798"	"16798"	"16780"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"349.0"	""	"319.8"	""	"381.2"	""	"661.7"	"2.7"	"699.1"	"716.9"	""	"711"	"33"	"35.000"	"28.000"	"0.0169761656785309"	"18"	"0.0001889"	"0.0008984"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"5/66"	"5"	"66"	"135876.353637695"	"HCD"	"MS2"	"5.045989"	"11.8"	"100.000"	"91.1447"	"31476"	"31476"	"31471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.8"	""	"11.8"	""	"14.7"	""	"26.1"	""	"23.0"	"25.2"	""	"712"	"40"	"35.000"	"28.000"	"0.00351115496884711"	"20"	"0.0001889"	"0.0006418"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"7/66"	"7"	"66"	"142792.813964844"	"HCD"	"MS2"	"11.54488"	"10.9"	"100.000"	"97.9740"	"33608"	"33608"	"33605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"10.1"	""	"12.0"	""	"19.4"	""	"24.1"	"28.2"	""	"712"	"48"	"35.000"	"28.000"	"0.000528993088654175"	"18"	"0"	"0.0001182"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"5/66"	"5"	"66"	"104737.643188477"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"115.5434"	"36976"	"36976"	"36972"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.4"	""	"9.1"	""	"9.6"	""	"13.1"	""	"14.3"	"18.5"	""	"712"	"16"	"35.000"	"28.000"	"0.811801777632149"	"14"	"0.000523"	"0.003259"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"4/66"	"4"	"66"	"97741.4619140625"	"HCD"	"MS2"	"5.620228"	"6.1"	"100.000"	"114.5123"	"36806"	"36806"	"36804"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.5"	""	"4.7"	""	"8.6"	""	"15.2"	""	"12.2"	"12.1"	""	"712"	"18"	"35.000"	"28.000"	"0.53882780444329"	"14"	"0.0006037"	"0.003995"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"9/66"	"9"	"66"	"153829.015136719"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"92.4670"	"31922"	"31922"	"31915"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"11.0"	""	"14.3"	""	"28.2"	""	"25.3"	"30.6"	""	"712"	"29"	"35.000"	"28.000"	"0.0457562050939927"	"14"	"0.0002277"	"0.001239"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"8/66"	"8"	"66"	"131635.915283203"	"HCD"	"MS2"	"5.811627"	"8.4"	"100.000"	"108.1044"	"35776"	"35776"	"35774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.4"	""	"5.4"	""	"11.6"	""	"19.7"	""	"17.3"	"19.1"	""	"712"	"22"	"35.000"	"28.000"	"0.229324258523403"	"14"	"0.0005564"	"0.003303"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"9/66"	"9"	"66"	"121859.014465332"	"HCD"	"MS2"	"5.024529"	"8.8"	"100.000"	"109.3872"	"35997"	"35997"	"35995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.6"	""	"12.2"	""	"12.7"	""	"21.1"	""	"19.2"	"13.2"	""	"712"	"25"	"35.000"	"28.000"	"0.105791310729874"	"14"	"0.0001889"	"0.001092"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"10/66"	"10"	"66"	"118722.573486328"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"109.8916"	"36087"	"36087"	"36085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.6"	""	"7.8"	""	"9.1"	""	"15.5"	""	"12.6"	"13.9"	""	"712"	"27"	"35.000"	"28.000"	"0.076462764879047"	"14"	"0.0001889"	"0.0007875"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"9/66"	"9"	"66"	"184532.93951416"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"87.7627"	"30189"	"30189"	"30175"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.3"	""	"14.2"	""	"21.6"	""	"31.3"	""	"31.2"	"29.1"	""	"712"	"26"	"35.000"	"28.000"	"0.0828800487728743"	"14"	"0.0003839"	"0.00204"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"10/66"	"10"	"66"	"141525.604064941"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"102.7193"	"34783"	"34783"	"34779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.3"	""	"9.0"	""	"14.3"	""	"16.3"	""	"18.1"	"23.6"	""	"712"	"23"	"35.000"	"28.000"	"0.164607643618137"	"14"	"0.0001889"	"0.0004249"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"9/66"	"9"	"66"	"141218.170043945"	"HCD"	"MS2"	"3.421494"	"11.2"	"100.000"	"101.7961"	"34574"	"34574"	"34572"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.2"	""	"10.5"	""	"11.9"	""	"26.4"	""	"23.6"	"22.3"	""	"712"	"27"	"35.000"	"28.000"	"0.0777051848616109"	"16"	"0.0008731"	"0.009362"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"5/66"	"5"	"66"	"128472.727172852"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"116.0572"	"37068"	"37068"	"37066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.3"	""	"3.5"	""	"6.6"	""	"14.9"	""	"15.8"	"16.3"	""	"712"	"16"	"35.000"	"28.000"	"0.840330251012286"	"15"	"0.000523"	"0.003036"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"5/66"	"5"	"66"	"129082.140136719"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"112.7210"	"36530"	"36530"	"36527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.7"	""	"5.0"	""	"9.1"	""	"13.0"	""	"13.1"	"10.6"	""	"712"	"22"	"35.000"	"28.000"	"0.23683724360782"	"14"	"0.00103"	"0.01132"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"4/66"	"4"	"66"	"146549.764099121"	"HCD"	"MS2"	"4.051247"	"8.0"	"100.000"	"116.8219"	"37197"	"37197"	"37195"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"9.5"	""	"8.2"	""	"17.4"	""	"19.2"	"17.5"	""	"712"	"15"	"35.000"	"28.000"	"1.19247696340187"	"13"	"0.0006037"	"0.005696"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"10/66"	"10"	"66"	"181355.294433594"	"HCD"	"MS2"	"18.33759"	"13.0"	"100.000"	"96.7074"	"33228"	"33228"	"33222"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.3"	""	"10.8"	""	"19.2"	""	"28.2"	""	"25.8"	"27.4"	""	"712"	"33"	"35.000"	"28.000"	"0.017236536285994"	"17"	"0.0002277"	"0.001144"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"9/66"	"9"	"66"	"143842.286682129"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"117.8505"	"37372"	"37372"	"37369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"7.8"	""	"9.8"	""	"14.6"	""	"15.0"	"17.9"	""	"712"	"19"	"35.000"	"28.000"	"0.401282294398482"	"14"	"0.0003839"	"0.002065"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"10/66"	"10"	"66"	"136790.350891113"	"HCD"	"MS2"	"6.358943"	"7.5"	"100.000"	"115.0279"	"36887"	"36887"	"36885"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.4"	""	"6.2"	""	"8.2"	""	"16.4"	""	"13.7"	"19.5"	""	"712"	"19"	"35.000"	"28.000"	"0.456509687425544"	"14"	"0.0003839"	"0.00166"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42249"	"1471.83769"	"1471.83833"	"-0.43"	"-0.00032"	"7/66"	"7"	"66"	"442232.3046875"	"HCD"	"MS2"	"0"	"28.8"	"100.000"	"83.2998"	"28391"	"28391"	"28366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.1"	""	"24.7"	""	"40.2"	""	"51.8"	"0.3"	"70.3"	"60.6"	""	"712"	"37"	"35.000"	"28.000"	"0.00720194827609465"	"15"	"7.476E-05"	"0.0001985"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"491.28409"	"1471.83771"	"1471.83833"	"-0.42"	"-0.00021"	"9/66"	"9"	"66"	"165480.68951416"	"HCD"	"MS2"	"39.97285"	"6.3"	"100.000"	"99.1228"	"33918"	"33918"	"33912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"5.6"	""	"9.7"	""	"15.8"	""	"12.9"	"11.7"	""	"712"	"34"	"35.000"	"28.000"	"0.0134725560159285"	"16"	"0.0001859"	"0.000353"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"491.28409"	"1471.83771"	"1471.83833"	"-0.42"	"-0.00021"	"8/66"	"8"	"66"	"8182467.80316162"	"HCD"	"MS2"	"57.20682"	"241.7"	"100.000"	"55.1804"	"16935"	"16935"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"272.6"	""	"274.7"	""	"292.9"	""	"447.8"	""	"499.7"	"510.6"	""	"712"	"29"	"35.000"	"28.000"	"0.0433960297217253"	"17"	"0.0001889"	"0.0007826"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28409"	"1471.83771"	"1471.83833"	"-0.42"	"-0.00021"	"8/66"	"8"	"66"	"8307241.4810791"	"HCD"	"MS2"	"23.7391"	"257.3"	"100.000"	"55.4899"	"17115"	"17115"	"17093"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"311.3"	""	"316.4"	""	"308.2"	""	"487.7"	""	"510.4"	"510.0"	""	"712"	"24"	"35.000"	"28.000"	"0.14670671679865"	"14"	"0.0003839"	"0.001724"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"491.28412"	"1471.83780"	"1471.83833"	"-0.36"	"-0.00018"	"9/66"	"9"	"66"	"266731.813598633"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"83.8730"	"28625"	"28625"	"28596"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.9"	""	"12.4"	""	"17.1"	""	"23.0"	""	"21.8"	"26.0"	""	"712"	"38"	"35.000"	"28.000"	"0.00569442658186822"	"16"	"0.0001889"	"0.0004511"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"5/66"	"5"	"66"	"115791.018310547"	"HCD"	"MS2"	"4.153783"	"8.2"	"100.000"	"108.4228"	"35835"	"35835"	"35833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.1"	""	"10.1"	""	"7.9"	""	"17.7"	""	"13.8"	"19.6"	""	"712"	"22"	"35.000"	"28.000"	"0.210111584541177"	"17"	"0.0004166"	"0.00252"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"10/66"	"10"	"66"	"152059.386230469"	"HCD"	"MS2"	"10.93548"	"11.1"	"100.000"	"97.7194"	"33536"	"33536"	"33532"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"11.5"	""	"13.4"	""	"21.9"	""	"27.1"	"27.3"	""	"712"	"29"	"35.000"	"28.000"	"0.0404995313753141"	"14"	"0.0001889"	"0.001022"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"10/66"	"10"	"66"	"187789.694580078"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"88.3544"	"30419"	"30419"	"30409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.0"	""	"14.3"	""	"16.3"	""	"33.5"	""	"33.1"	"32.6"	""	"712"	"38"	"35.000"	"28.000"	"0.00597654230451632"	"25"	"0.0001308"	"0.0002583"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"8/66"	"8"	"66"	"144312.805541992"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"101.2851"	"34459"	"34459"	"34457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"9.2"	""	"14.3"	""	"24.0"	""	"27.8"	"23.5"	""	"712"	"23"	"35.000"	"28.000"	"0.19973307946756"	"14"	"0.0003839"	"0.001886"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"9/66"	"9"	"66"	"131624.052612305"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"105.8027"	"35370"	"35370"	"35368"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.1"	""	"5.1"	""	"10.9"	""	"19.8"	""	"18.2"	"16.1"	""	"712"	"23"	"35.000"	"28.000"	"0.197901915588264"	"14"	"0.0003146"	"0.00144"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"11/66"	"11"	"66"	"150730.948364258"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"88.8928"	"30623"	"30623"	"30620"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"9.4"	""	"15.4"	""	"24.4"	""	"25.6"	"33.1"	""	"712"	"41"	"35.000"	"28.000"	"0.00290703324203659"	"20"	"0.0001889"	"0.0005653"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"9/66"	"9"	"66"	"130848.864257813"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"106.0573"	"35412"	"35412"	"35410"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.7"	""	"9.1"	""	"10.5"	""	"16.7"	""	"19.6"	"18.2"	""	"712"	"30"	"35.000"	"28.000"	"0.0318749856535656"	"15"	"0.0001889"	"0.0006317"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"10/66"	"10"	"66"	"159407.356262207"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"101.1902"	"34456"	"34456"	"34452"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"9.7"	""	"12.4"	""	"23.6"	""	"25.5"	"22.2"	""	"712"	"28"	"35.000"	"28.000"	"0.0570755359085655"	"15"	"0.0002277"	"0.001166"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"9/66"	"9"	"66"	"187153.331481934"	"HCD"	"MS2"	"5.225873"	"14.8"	"100.000"	"87.8491"	"30272"	"30272"	"30258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.4"	""	"11.5"	""	"21.0"	""	"34.0"	""	"27.8"	"33.9"	""	"712"	"33"	"35.000"	"28.000"	"0.0194289798548492"	"16"	"0.0003571"	"0.001484"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"5/66"	"5"	"66"	"164905.753173828"	"HCD"	"MS2"	"27.98711"	"11.9"	"100.000"	"95.3106"	"32849"	"32849"	"32845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.0"	""	"10.9"	""	"13.7"	""	"28.2"	""	"24.8"	"23.5"	""	"712"	"23"	"35.000"	"28.000"	"0.171178808048103"	"18"	"0.0003839"	"0.002041"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"11/66"	"11"	"66"	"164044.928771973"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"99.6083"	"34057"	"34057"	"34054"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"11.1"	""	"15.0"	""	"29.0"	""	"26.4"	"24.1"	""	"712"	"29"	"35.000"	"28.000"	"0.0403134529311858"	"14"	"0.0001889"	"0.0005324"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"5/66"	"5"	"66"	"125200.649841309"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"115.2857"	"36929"	"36929"	"36927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.1"	""	"10.3"	""	"4.7"	""	"17.6"	""	"13.0"	"17.6"	""	"712"	"17"	"35.000"	"28.000"	"0.796984725330329"	"14"	"0.0006396"	"0.006219"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"9/66"	"9"	"66"	"134954.91986084"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"109.6993"	"36051"	"36051"	"36048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.2"	""	"5.7"	""	"8.8"	""	"13.8"	"1.8"	"16.7"	"18.6"	""	"712"	"25"	"35.000"	"28.000"	"0.108006526157316"	"14"	"0.000523"	"0.003071"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"10/66"	"10"	"66"	"167307.800048828"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"98.8451"	"33844"	"33844"	"33838"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.3"	""	"7.7"	""	"14.7"	""	"21.7"	""	"26.2"	"25.6"	""	"712"	"28"	"35.000"	"28.000"	"0.0568132976416277"	"15"	"0.0002277"	"0.001205"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"5/66"	"5"	"66"	"159656.026184082"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"117.5940"	"37328"	"37328"	"37323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"7.6"	""	"10.2"	""	"13.9"	""	"16.2"	"16.7"	""	"712"	"13"	"35.000"	"28.000"	"1.95186599511824"	"13"	"0.0009404"	"0.01008"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"7/66"	"7"	"66"	"516289.831604004"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"76.9383"	"25796"	"25796"	"25773"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.1"	""	"47.3"	"1.7"	"45.4"	""	"79.8"	"0.3"	"95.2"	"88.3"	""	"712"	"49"	"35.000"	"28.000"	"0.000415384223673703"	"25"	"0"	"0.0001365"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"736.42255"	"1471.83782"	"1471.83833"	"-0.35"	"-0.00026"	"7/66"	"7"	"66"	"2780356.10845947"	"HCD"	"MS2"	"14.84943"	"202.9"	"100.000"	"59.0209"	"18553"	"18553"	"18533"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"239.1"	""	"228.1"	""	"252.9"	""	"366.4"	"7.6"	"400.7"	"431.8"	""	"712"	"37"	"35.000"	"28.000"	"0.00784241820847031"	"16"	"0.0001308"	"0.0002925"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"491.28415"	"1471.83789"	"1471.83833"	"-0.30"	"-0.00014"	"9/66"	"9"	"66"	"299783.046813965"	"HCD"	"MS2"	"11.5806"	"11.2"	"100.000"	"83.5338"	"28538"	"28538"	"28507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.6"	""	"9.4"	""	"13.9"	""	"22.8"	""	"24.7"	"25.5"	""	"725"	"36"	"35.000"	"28.000"	"0.00877623029441865"	"16"	"0.0001889"	"0.0004864"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"10/66"	"10"	"66"	"170436.056091309"	"HCD"	"MS2"	"5.836332"	"14.8"	"100.000"	"88.6864"	"30591"	"30591"	"30574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.3"	""	"16.5"	""	"15.3"	""	"34.5"	""	"28.7"	"33.8"	""	"730"	"30"	"35.000"	"28.000"	"0.0402988696264256"	"19"	"0.0001889"	"0.0007268"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"11/66"	"11"	"66"	"118043.782348633"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"104.7747"	"35198"	"35198"	"35194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"9.2"	""	"8.9"	""	"20.1"	""	"22.9"	"18.2"	""	"730"	"42"	"35.000"	"28.000"	"0.00251937528401688"	"17"	"0.0001859"	"0.0003461"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"7/66"	"7"	"66"	"117701.1796875"	"HCD"	"MS2"	"3.564848"	"7.7"	"100.000"	"109.9581"	"36096"	"36096"	"36094"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"9.5"	""	"8.4"	""	"13.2"	""	"18.7"	"16.7"	""	"730"	"26"	"35.000"	"28.000"	"0.0840026263354105"	"15"	"0.0001889"	"0.001104"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"5/66"	"5"	"66"	"96307.2746582031"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"113.2291"	"36608"	"36608"	"36605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"5.6"	""	"4.4"	""	"9.5"	""	"10.6"	"11.7"	""	"730"	"17"	"35.000"	"28.000"	"0.719934298681921"	"14"	"0.000523"	"0.002941"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"10/66"	"10"	"66"	"151939.04309082"	"HCD"	"MS2"	"8.681781"	"13.5"	"100.000"	"90.5529"	"31242"	"31242"	"31236"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.7"	""	"13.4"	""	"16.4"	""	"25.9"	""	"33.7"	"29.8"	""	"730"	"34"	"35.000"	"28.000"	"0.0141023946624735"	"17"	"0.0001889"	"0.0007819"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"6/66"	"6"	"66"	"131880.845031738"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"117.6500"	"37354"	"37354"	"37352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"8.6"	""	"8.3"	""	"19.4"	""	"21.2"	"17.6"	""	"730"	"40"	"35.000"	"28.000"	"0.00345376563898514"	"16"	"0.0005564"	"0.003326"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"11/66"	"11"	"66"	"140693.990661621"	"HCD"	"MS2"	"3.457299"	"9.4"	"100.000"	"102.8238"	"34799"	"34799"	"34796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"7.8"	""	"12.5"	""	"19.3"	""	"19.0"	"20.9"	""	"730"	"34"	"35.000"	"28.000"	"0.0132523489991087"	"15"	"0.0001308"	"0.0002789"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"5/66"	"5"	"66"	"124328.106994629"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"111.9387"	"36413"	"36413"	"36411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.8"	""	"8.2"	""	"6.8"	""	"15.5"	""	"12.2"	"15.3"	""	"730"	"15"	"35.000"	"28.000"	"1.04302054833186"	"13"	"0.000494"	"0.002641"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"5/66"	"5"	"66"	"121611.040405273"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"108.6806"	"35878"	"35878"	"35876"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.0"	""	"9.1"	""	"12.6"	""	"21.0"	""	"17.7"	"20.3"	""	"730"	"13"	"35.000"	"28.000"	"1.73098324619989"	"13"	"0.0006037"	"0.005859"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"5/66"	"5"	"66"	"138820.548034668"	"HCD"	"MS2"	"5.157276"	"8.0"	"100.000"	"108.6160"	"35869"	"35869"	"35867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.2"	""	"8.3"	""	"10.6"	""	"16.8"	""	"15.8"	"18.2"	""	"730"	"17"	"35.000"	"28.000"	"0.798532992741586"	"14"	"0.0007444"	"0.007189"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"10/66"	"10"	"66"	"169917.973571777"	"HCD"	"MS2"	"19.86735"	"12.2"	"100.000"	"91.8862"	"31701"	"31701"	"31693"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.8"	""	"12.4"	""	"11.1"	""	"24.2"	"1.6"	"28.1"	"26.8"	""	"730"	"27"	"35.000"	"28.000"	"0.0802218853566461"	"15"	"0.0001889"	"0.001111"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"10/66"	"10"	"66"	"263641.846557617"	"HCD"	"MS2"	"17.56931"	"20.6"	"100.000"	"85.3440"	"29275"	"29275"	"29250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.3"	""	"22.3"	""	"28.1"	""	"40.4"	""	"40.8"	"46.5"	""	"730"	"32"	"35.000"	"28.000"	"0.02164177434717"	"19"	"0.0001889"	"0.0004607"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"4/66"	"4"	"66"	"148980.598022461"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"116.8783"	"37221"	"37221"	"37219"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.8"	""	"10.5"	""	"9.2"	""	"22.4"	""	"17.1"	"19.0"	""	"730"	"15"	"35.000"	"28.000"	"1.06977603451637"	"13"	"0.0005564"	"0.003525"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"4/66"	"4"	"66"	"145196.601989746"	"HCD"	"MS2"	"5.663681"	"8.3"	"100.000"	"118.8767"	"37546"	"37546"	"37544"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.9"	""	"4.0"	""	"10.9"	""	"17.2"	""	"18.1"	"18.0"	""	"730"	"14"	"35.000"	"28.000"	"1.32218694422095"	"13"	"0.0006037"	"0.005063"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"6/66"	"6"	"66"	"150574.459899902"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"117.9051"	"37400"	"37400"	"37398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"8.4"	"2.0"	"10.0"	""	"19.1"	""	"21.5"	"15.7"	""	"730"	"16"	"35.000"	"28.000"	"1.00761091752043"	"13"	"0.000523"	"0.002883"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"7/66"	"7"	"66"	"4438122.22064209"	"HCD"	"MS2"	"8.190664"	"347.7"	"100.000"	"58.7089"	"18427"	"18427"	"18405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"416.2"	""	"395.0"	""	"426.5"	""	"625.0"	"7.4"	"703.7"	"727.6"	""	"730"	"39"	"35.000"	"28.000"	"0.00488981990910466"	"21"	"0.0001308"	"0.0002785"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42261"	"1471.83794"	"1471.83833"	"-0.27"	"-0.00020"	"7/66"	"7"	"66"	"11224043.4053345"	"HCD"	"MS2"	"34.22724"	"624.9"	"82.019"	"55.1920"	"16940"	"16940"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"723.0"	""	"708.7"	""	"769.9"	""	"1189.4"	"19.1"	"1253.0"	"1270.1"	""	"730"	"36"	"35.000"	"28.000"	"0.00989219945640157"	"15"	"0.0001859"	"0.0003563"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"491.28418"	"1471.83799"	"1471.83833"	"-0.23"	"-0.00011"	"9/66"	"9"	"66"	"10956508.288208"	"HCD"	"MS2"	"19.19681"	"322.9"	"100.000"	"55.8682"	"17216"	"17216"	"17195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"201.6"	""	"176.4"	""	"299.3"	""	"351.4"	"10.2"	"1411.4"	"654.3"	""	"730"	"30"	"35.000"	"28.000"	"0.0343789702730837"	"19"	"0.0003839"	"0.001728"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"9/66"	"9"	"66"	"144186.979797363"	"HCD"	"MS2"	"4.943602"	"12.6"	"100.000"	"96.9310"	"33303"	"33303"	"33298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.0"	""	"10.1"	""	"15.7"	""	"28.5"	""	"24.9"	"29.4"	""	"730"	"30"	"35.000"	"28.000"	"0.0339854374545758"	"18"	"0.0003839"	"0.001653"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"11/66"	"11"	"66"	"127115.807495117"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"103.2303"	"34890"	"34890"	"34886"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.9"	""	"13.0"	""	"10.4"	""	"19.2"	""	"20.3"	"24.4"	""	"730"	"34"	"35.000"	"28.000"	"0.0142001477922912"	"15"	"0.0001889"	"0.0004903"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"11/66"	"11"	"66"	"154087.230407715"	"HCD"	"MS2"	"6.0007"	"11.2"	"100.000"	"92.7932"	"32025"	"32025"	"32017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"9.6"	""	"16.0"	""	"19.6"	""	"22.9"	"28.1"	""	"730"	"43"	"35.000"	"28.000"	"0.00170330673814715"	"17"	"0.0001308"	"0.0002387"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"10/66"	"10"	"66"	"154265.851135254"	"HCD"	"MS2"	"6.533931"	"12.4"	"100.000"	"98.3132"	"33699"	"33699"	"33695"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.7"	""	"15.2"	""	"17.1"	""	"22.0"	""	"23.2"	"33.1"	""	"730"	"30"	"35.000"	"28.000"	"0.038662760968971"	"14"	"0.0001889"	"0.0009298"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"10/66"	"10"	"66"	"155352.519775391"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"91.3589"	"31525"	"31525"	"31521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.7"	""	"14.6"	""	"12.8"	""	"23.9"	""	"26.6"	"26.7"	""	"730"	"32"	"35.000"	"28.000"	"0.0211491474195812"	"15"	"0.0001889"	"0.0009419"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"9/66"	"9"	"66"	"131032.951293945"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"102.9751"	"34836"	"34836"	"34832"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.2"	""	"7.0"	""	"11.9"	""	"22.8"	""	"17.3"	"21.0"	""	"730"	"30"	"35.000"	"28.000"	"0.0350988481610037"	"17"	"0.0002723"	"0.001369"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"9/66"	"9"	"66"	"147645.904846191"	"HCD"	"MS2"	"19.56467"	"12.2"	"100.000"	"89.1531"	"30712"	"30712"	"30707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.3"	""	"13.2"	""	"13.3"	""	"28.0"	""	"31.3"	"23.0"	""	"730"	"30"	"35.000"	"28.000"	"0.0407655085439905"	"21"	"0.0002277"	"0.001213"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"8/66"	"8"	"66"	"157095.167358398"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"91.1031"	"31435"	"31435"	"31427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.0"	""	"16.0"	""	"15.0"	""	"25.6"	"0.7"	"31.5"	"34.4"	""	"730"	"33"	"35.000"	"28.000"	"0.019421951463238"	"21"	"0.0003839"	"0.001839"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"4/66"	"4"	"66"	"132212.361450195"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"109.1904"	"35962"	"35962"	"35960"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.7"	""	"5.9"	""	"9.8"	""	"19.5"	""	"18.8"	"17.6"	""	"730"	"21"	"35.000"	"28.000"	"0.325306592418817"	"14"	"0.0005564"	"0.003459"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"9/66"	"9"	"66"	"130702.995117188"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"117.3926"	"37310"	"37310"	"37308"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"5.5"	""	"8.5"	""	"20.4"	""	"17.2"	"17.0"	""	"730"	"23"	"35.000"	"28.000"	"0.173497357469124"	"16"	"0.0003839"	"0.001669"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"10/66"	"10"	"66"	"156461.825195313"	"HCD"	"MS2"	"4.296246"	"11.0"	"100.000"	"96.9600"	"33308"	"33308"	"33305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.4"	""	"13.2"	""	"14.3"	""	"20.5"	""	"24.9"	"24.2"	""	"730"	"24"	"35.000"	"28.000"	"0.154986140840404"	"14"	"0.0002277"	"0.001171"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"9/66"	"9"	"66"	"145564.911376953"	"HCD"	"MS2"	"18.44072"	"8.3"	"100.000"	"119.1789"	"37617"	"37617"	"37615"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"8.4"	""	"9.1"	""	"15.7"	""	"24.6"	"11.9"	""	"730"	"22"	"35.000"	"28.000"	"0.211491474195811"	"14"	"0.0001889"	"0.0005753"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"10/66"	"10"	"66"	"168508.761657715"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"119.4356"	"37662"	"37662"	"37660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.9"	""	"10.3"	""	"11.0"	""	"18.0"	""	"16.9"	"20.3"	""	"730"	"20"	"35.000"	"28.000"	"0.392006135504554"	"14"	"0.0002277"	"0.001244"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"7/66"	"7"	"66"	"606112.962524414"	"HCD"	"MS2"	"11.01083"	"49.0"	"100.000"	"70.1226"	"23077"	"23077"	"23050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.7"	""	"49.0"	""	"60.2"	""	"100.0"	"1.9"	"99.5"	"106.4"	""	"730"	"40"	"35.000"	"28.000"	"0.00329073465226174"	"16"	"0.0001308"	"0.000269"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"5/66"	"5"	"66"	"202728.858459473"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"116.3614"	"37137"	"37137"	"37135"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"12.0"	""	"13.3"	""	"17.3"	""	"19.3"	"19.9"	""	"730"	"12"	"35.000"	"28.000"	"2.1394043004762"	"13"	"0.0006037"	"0.005282"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"7/66"	"7"	"66"	"1895950491.5"	"HCD"	"MS2"	"0"	"487.9"	"0.370"	"53.1511"	"16124"	"16124"	"16119"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"465.0"	""	"461.2"	""	"514.9"	""	"1058.9"	"5.2"	"1061.9"	"1074.4"	""	"730"	"42"	"35.000"	"28.000"	"0.00225057175679441"	"20"	"0.001058"	"0.01375"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"736.42267"	"1471.83806"	"1471.83833"	"-0.18"	"-0.00013"	"7/66"	"7"	"66"	"1771680004.85938"	"HCD"	"MS2"	"0"	"459.3"	"0.388"	"53.4112"	"16222"	"16222"	"16217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"431.3"	""	"443.5"	""	"532.6"	""	"955.1"	"1.5"	"996.4"	"1008.3"	""	"730"	"46"	"35.000"	"28.000"	"0.00101459534273214"	"21"	"0.00119"	"0.01628"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"491.28421"	"1471.83808"	"1471.83833"	"-0.17"	"-0.00008"	"8/66"	"8"	"66"	"203172.231994629"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"115.6243"	"36991"	"36991"	"36988"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"3.7"	""	"7.4"	""	"9.8"	""	"9.0"	"8.6"	""	"730"	"25"	"35.000"	"28.000"	"0.107224212296596"	"15"	"0.0001889"	"0.0009124"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28421"	"1471.83808"	"1471.83833"	"-0.17"	"-0.00008"	"9/66"	"9"	"66"	"53440750.2807617"	"HCD"	"MS2"	"25.0352"	"302.8"	"20.254"	"54.5437"	"16674"	"16674"	"16656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"330.1"	""	"338.1"	""	"367.7"	""	"560.3"	""	"638.5"	"643.7"	""	"730"	"33"	"35.000"	"28.000"	"0.0185051608520267"	"15"	"0.0003839"	"0.001637"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"4/66"	"4"	"66"	"99501.1353759766"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"112.5005"	"36503"	"36503"	"36500"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"3.8"	""	"11.3"	""	"14.7"	""	"14.7"	"14.3"	""	"730"	"21"	"35.000"	"28.000"	"0.315713290353128"	"14"	"0.0002277"	"0.001291"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"8/66"	"8"	"66"	"123667.946105957"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"105.2905"	"35288"	"35288"	"35286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"10.4"	""	"11.0"	""	"23.7"	""	"22.1"	"22.5"	""	"730"	"26"	"35.000"	"28.000"	"0.0946875467173367"	"15"	"0.0004166"	"0.002156"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"9/66"	"9"	"66"	"120438.874511719"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"105.9059"	"35380"	"35380"	"35377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"11.6"	""	"11.5"	""	"17.0"	""	"17.4"	"19.6"	""	"730"	"25"	"35.000"	"28.000"	"0.105996826887952"	"19"	"0.0001889"	"0.0009344"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"5/66"	"5"	"66"	"156820.623840332"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"90.0407"	"31086"	"31086"	"31074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.7"	""	"13.9"	""	"12.2"	""	"26.6"	""	"41.1"	"26.4"	""	"730"	"24"	"35.000"	"28.000"	"0.13973103131064"	"15"	"0.000523"	"0.002913"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"10/66"	"10"	"66"	"143273.161499023"	"HCD"	"MS2"	"5.251479"	"11.4"	"100.000"	"102.0622"	"34633"	"34633"	"34630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.7"	""	"9.3"	""	"14.2"	""	"19.2"	""	"27.0"	"25.3"	""	"730"	"29"	"35.000"	"28.000"	"0.0432805593081013"	"14"	"0.0001889"	"0.0006986"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"9/66"	"9"	"66"	"117454.222167969"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"109.6405"	"36041"	"36041"	"36039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"7.7"	""	"10.0"	""	"16.2"	""	"18.2"	"18.2"	""	"730"	"28"	"35.000"	"28.000"	"0.064757916052491"	"14"	"0.0002277"	"0.001238"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"4/66"	"4"	"66"	"143968.310180664"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"110.7161"	"36220"	"36220"	"36217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"7.0"	""	"12.8"	""	"22.2"	""	"18.5"	"20.2"	""	"730"	"19"	"35.000"	"28.000"	"0.427851308425068"	"14"	"0.0004166"	"0.002375"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"10/66"	"10"	"66"	"150699.81427002"	"HCD"	"MS2"	"12.92709"	"12.2"	"100.000"	"90.8415"	"31341"	"31341"	"31334"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.8"	""	"14.3"	""	"12.4"	""	"29.5"	""	"25.6"	"21.8"	""	"730"	"38"	"35.000"	"28.000"	"0.00615591854266891"	"18"	"0.0001889"	"0.0009408"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"11/66"	"11"	"66"	"158739.687561035"	"HCD"	"MS2"	"5.029525"	"12.4"	"100.000"	"93.8317"	"32359"	"32359"	"32351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"13.5"	""	"13.8"	""	"28.5"	""	"26.3"	"27.0"	""	"730"	"27"	"35.000"	"28.000"	"0.0764351046385576"	"14"	"0.0001889"	"0.0008877"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"10/66"	"10"	"66"	"140732.680664063"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"102.3145"	"34685"	"34685"	"34683"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.7"	""	"9.9"	""	"13.4"	""	"17.8"	""	"18.9"	"22.6"	""	"730"	"29"	"35.000"	"28.000"	"0.0412375508855571"	"15"	"0.0001889"	"0.0008485"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"10/66"	"10"	"66"	"151565.811523438"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"98.4936"	"33749"	"33749"	"33745"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.5"	""	"11.8"	""	"15.4"	""	"22.0"	""	"22.4"	"21.2"	""	"730"	"33"	"35.000"	"28.000"	"0.0178769269069483"	"15"	"0.0001308"	"0.0003045"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"10/66"	"10"	"66"	"127383.01574707"	"HCD"	"MS2"	"9.370912"	"7.9"	"100.000"	"109.1311"	"35953"	"35953"	"35951"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.3"	""	"6.9"	""	"7.8"	""	"15.2"	""	"17.1"	"19.2"	""	"730"	"23"	"35.000"	"28.000"	"0.167221788650805"	"14"	"0.0001889"	"0.0008043"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"5/66"	"5"	"66"	"141915.186157227"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"118.1094"	"37417"	"37417"	"37414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"5.8"	""	"8.4"	""	"18.3"	""	"17.1"	"20.1"	""	"730"	"18"	"35.000"	"28.000"	"0.556279255136011"	"14"	"0.0006037"	"0.004406"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"7/66"	"7"	"66"	"168395.743469238"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"98.7453"	"33818"	"33818"	"33814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.5"	""	"12.8"	""	"15.6"	""	"19.3"	""	"23.7"	"26.2"	""	"730"	"21"	"35.000"	"28.000"	"0.291268060852811"	"14"	"0.0003839"	"0.00189"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"9/66"	"9"	"66"	"147272.833251953"	"HCD"	"MS2"	"11.97622"	"8.4"	"100.000"	"118.9245"	"37572"	"37572"	"37569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.9"	""	"8.5"	""	"11.7"	""	"20.4"	""	"16.0"	"17.0"	""	"730"	"20"	"35.000"	"28.000"	"0.335191397716507"	"14"	"0.0004166"	"0.002203"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"7/66"	"7"	"66"	"157960.545837402"	"HCD"	"MS2"	"6.346864"	"10.2"	"100.000"	"119.6946"	"37709"	"37709"	"37707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.6"	""	"10.2"	""	"11.0"	""	"20.3"	""	"16.6"	"27.2"	""	"730"	"19"	"35.000"	"28.000"	"0.481163709573088"	"14"	"0.0006037"	"0.004046"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"7/66"	"7"	"66"	"222048.338256836"	"HCD"	"MS2"	"61.76796"	"12.1"	"100.000"	"94.9301"	"32715"	"32715"	"32706"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"10.4"	""	"15.6"	""	"26.0"	""	"25.5"	"28.1"	""	"730"	"16"	"35.000"	"28.000"	"0.910527075334178"	"18"	"0.000523"	"0.002874"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"10/66"	"10"	"66"	"213530.578552246"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"88.0599"	"30305"	"30305"	"30293"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.1"	""	"19.3"	""	"16.6"	""	"35.1"	""	"33.4"	"33.4"	""	"730"	"25"	"35.000"	"28.000"	"0.110992303437184"	"14"	"0.0001889"	"0.0009928"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"11/66"	"11"	"66"	"174085.035705566"	"HCD"	"MS2"	"10.7808"	"12.8"	"100.000"	"92.7574"	"31991"	"31991"	"31981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.5"	""	"13.3"	""	"12.9"	""	"30.1"	""	"22.4"	"32.9"	""	"730"	"37"	"35.000"	"28.000"	"0.00695493162056584"	"21"	"0.0001889"	"0.0005167"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"10/66"	"10"	"66"	"153554.399841309"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"102.5664"	"34746"	"34746"	"34742"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.2"	""	"10.3"	""	"11.1"	""	"21.1"	""	"19.0"	"18.1"	""	"730"	"24"	"35.000"	"28.000"	"0.155701524362581"	"14"	"0.0001889"	"0.0005766"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"9/66"	"9"	"66"	"138725.775695801"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"118.6199"	"37500"	"37500"	"37498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"5.4"	""	"9.8"	""	"14.5"	""	"15.1"	"15.4"	""	"730"	"19"	"35.000"	"28.000"	"0.472381482129245"	"14"	"0.0003839"	"0.001611"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"8/66"	"8"	"66"	"1151197.28271484"	"HCD"	"MS2"	"0"	"98.4"	"100.000"	"62.8211"	"20052"	"20052"	"20025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.8"	""	"108.8"	""	"121.4"	""	"197.8"	"0.3"	"205.7"	"206.6"	""	"730"	"40"	"35.000"	"28.000"	"0.00371785856639752"	"21"	"0.0001308"	"0.0003124"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"736.42273"	"1471.83818"	"1471.83833"	"-0.10"	"-0.00007"	"8/66"	"8"	"66"	"1518078.94470215"	"HCD"	"MS2"	"51.51652"	"120.9"	"100.000"	"68.0906"	"22196"	"22196"	"22170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.5"	""	"144.4"	""	"165.1"	""	"237.3"	"1.8"	"229.5"	"228.1"	""	"730"	"26"	"35.000"	"28.000"	"0.095343889435571"	"16"	"0.0002277"	"0.00123"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"491.28427"	"1471.83826"	"1471.83833"	"-0.05"	"-0.00002"	"8/66"	"8"	"66"	"156853.968261719"	"HCD"	"MS2"	"43.23921"	"5.9"	"100.000"	"99.4970"	"34034"	"34034"	"34030"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.1"	"2.3"	"6.3"	""	"5.2"	""	"11.0"	""	"14.2"	"13.7"	""	"730"	"28"	"35.000"	"28.000"	"0.0528801726543838"	"15"	"0.0001889"	"0.0006095"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"491.28427"	"1471.83826"	"1471.83833"	"-0.05"	"-0.00002"	"9/66"	"9"	"66"	"362273.955566406"	"HCD"	"MS2"	"42.46605"	"15.5"	"100.000"	"77.2607"	"25928"	"25928"	"25897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.0"	""	"18.7"	""	"17.6"	""	"33.1"	""	"31.8"	"28.1"	""	"730"	"33"	"35.000"	"28.000"	"0.0194667236852982"	"19"	"0.0001889"	"0.000569"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"491.28427"	"1471.83826"	"1471.83833"	"-0.05"	"-0.00002"	"10/66"	"10"	"66"	"749027839.128906"	"HCD"	"MS2"	"3.616066"	"321.6"	"1.649"	"53.6927"	"16330"	"16330"	"16318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"292.8"	""	"301.3"	""	"364.7"	""	"687.8"	""	"716.4"	"699.5"	""	"730"	"41"	"35.000"	"28.000"	"0.00325306592418817"	"17"	"0.001422"	"0.01965"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"4/66"	"4"	"66"	"116648.993469238"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"106.9179"	"35566"	"35566"	"35564"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	""	"7.8"	""	"8.5"	""	"14.6"	""	"18.9"	"22.4"	""	"730"	"26"	"35.000"	"28.000"	"0.0875574015442114"	"20"	"0.0003146"	"0.001409"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"9/66"	"9"	"66"	"160484.581115723"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"98.0557"	"33627"	"33627"	"33621"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"12.6"	""	"14.2"	""	"22.2"	""	"28.7"	"26.8"	""	"730"	"18"	"35.000"	"28.000"	"0.583838680444354"	"14"	"0.0004166"	"0.0024"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"8/66"	"8"	"66"	"100872.971435547"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"114.2613"	"36763"	"36763"	"36761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"6.1"	""	"7.8"	""	"15.9"	""	"14.5"	"14.9"	""	"730"	"20"	"35.000"	"28.000"	"0.383082986458098"	"16"	"0.0005564"	"0.003632"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"9/66"	"9"	"66"	"147800.055358887"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"93.4406"	"32208"	"32208"	"32200"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.7"	""	"11.4"	""	"12.7"	""	"24.9"	""	"22.8"	"31.0"	""	"730"	"28"	"35.000"	"28.000"	"0.0611354149749649"	"14"	"0.0001859"	"0.000363"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"5/66"	"5"	"66"	"161814.835083008"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"92.2069"	"31835"	"31835"	"31826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.7"	""	"11.2"	""	"19.8"	""	"32.9"	""	"26.8"	"25.4"	""	"730"	"36"	"35.000"	"28.000"	"0.00906343583432883"	"17"	"0.0002277"	"0.001193"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"5/66"	"5"	"66"	"150000.104614258"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"99.5238"	"34041"	"34041"	"34038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.7"	""	"9.9"	""	"12.6"	""	"19.9"	""	"26.5"	"25.9"	""	"730"	"30"	"35.000"	"28.000"	"0.0384851217182809"	"18"	"0.0001889"	"0.001109"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"5/66"	"5"	"66"	"160859.611877441"	"HCD"	"MS2"	"30.7364"	"13.7"	"100.000"	"95.1845"	"32788"	"32788"	"32784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.4"	""	"12.7"	""	"15.8"	""	"30.5"	""	"32.5"	"25.1"	""	"730"	"20"	"35.000"	"28.000"	"0.370077655793888"	"15"	"0.0006037"	"0.004208"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"9/66"	"9"	"66"	"125061.810058594"	"HCD"	"MS2"	"8.696439"	"8.9"	"100.000"	"108.1704"	"35790"	"35790"	"35788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.0"	""	"8.2"	""	"9.5"	""	"18.2"	""	"20.0"	"20.5"	""	"730"	"27"	"35.000"	"28.000"	"0.0716626501045157"	"14"	"0.0001889"	"0.0006143"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"7/66"	"7"	"66"	"141093.98828125"	"HCD"	"MS2"	"16.84944"	"10.6"	"100.000"	"101.5398"	"34513"	"34513"	"34510"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"7.8"	""	"14.2"	""	"19.9"	""	"23.3"	"26.7"	""	"730"	"24"	"35.000"	"28.000"	"0.154986140840404"	"15"	"0.0001889"	"0.0007613"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"4/66"	"4"	"66"	"132819.610717773"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"102.4672"	"34727"	"34727"	"34724"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.4"	""	"7.2"	""	"9.7"	""	"19.2"	""	"19.0"	"20.7"	""	"730"	"18"	"35.000"	"28.000"	"0.517955995416518"	"14"	"0.000494"	"0.002733"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"8/66"	"8"	"66"	"163961.292236328"	"HCD"	"MS2"	"11.73912"	"12.0"	"100.000"	"92.4719"	"31900"	"31900"	"31896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.8"	""	"14.8"	""	"15.3"	""	"19.4"	""	"27.6"	"27.5"	""	"730"	"33"	"35.000"	"28.000"	"0.0202905053903697"	"21"	"0.0001889"	"0.000594"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"7/66"	"7"	"66"	"190051.529296875"	"HCD"	"MS2"	"5.096171"	"14.4"	"100.000"	"88.1229"	"30375"	"30375"	"30367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.3"	""	"10.7"	""	"19.4"	""	"33.7"	""	"29.6"	"25.9"	""	"730"	"34"	"35.000"	"28.000"	"0.0141023946624735"	"15"	"7.476E-05"	"0.0001982"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"8/66"	"8"	"66"	"117577.813354492"	"HCD"	"MS2"	"7.452646"	"7.9"	"100.000"	"108.8738"	"35913"	"35913"	"35910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"7.0"	""	"10.3"	""	"17.4"	""	"15.3"	"17.9"	""	"730"	"20"	"35.000"	"28.000"	"0.329073465226174"	"14"	"0.000523"	"0.002874"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"9/66"	"9"	"66"	"147279.938049316"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"105.5463"	"35327"	"35327"	"35325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.2"	""	"6.4"	""	"9.9"	"1.8"	"19.0"	""	"23.9"	"19.7"	""	"730"	"22"	"35.000"	"28.000"	"0.235663793597649"	"14"	"0.0001889"	"0.0008975"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"11/66"	"11"	"66"	"170500.490356445"	"HCD"	"MS2"	"3.25384"	"13.6"	"100.000"	"90.0235"	"31047"	"31047"	"31039"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.4"	""	"8.4"	""	"17.2"	""	"27.2"	""	"33.9"	"32.0"	""	"730"	"39"	"35.000"	"28.000"	"0.00456344546029467"	"23"	"0.0001889"	"0.0005664"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"7/66"	"7"	"66"	"242181.801818848"	"HCD"	"MS2"	"20.82791"	"18.8"	"100.000"	"85.9950"	"29535"	"29535"	"29513"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.7"	""	"16.9"	""	"25.1"	""	"42.4"	""	"36.6"	"41.5"	""	"730"	"46"	"35.000"	"28.000"	"0.00100298136588237"	"16"	"0"	"0.0001352"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"9/66"	"9"	"66"	"141897.07220459"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"115.0804"	"36915"	"36915"	"36911"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.9"	""	"8.8"	""	"6.7"	""	"15.9"	""	"15.4"	"16.9"	""	"730"	"19"	"35.000"	"28.000"	"0.492371452145953"	"16"	"0.0004166"	"0.002206"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"7/66"	"7"	"66"	"590310.911865234"	"HCD"	"MS2"	"27.30009"	"50.9"	"100.000"	"77.5386"	"26092"	"26092"	"26069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.3"	""	"80.1"	""	"60.0"	""	"85.8"	""	"86.1"	"128.6"	""	"730"	"43"	"35.000"	"28.000"	"0.0017270020952094"	"16"	"0.0001889"	"0.0005203"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"11/66"	"11"	"66"	"415026.663024902"	"HCD"	"MS2"	"27.5006"	"33.7"	"100.000"	"79.1853"	"26713"	"26713"	"26689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.1"	""	"34.7"	""	"33.3"	""	"65.0"	"0.8"	"74.7"	"74.3"	""	"730"	"37"	"35.000"	"28.000"	"0.00726595768730323"	"16"	"0.0001889"	"0.0003936"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"8/66"	"8"	"66"	"688963.111816406"	"HCD"	"MS2"	"30.95174"	"62.3"	"100.000"	"69.9655"	"22961"	"22961"	"22937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.6"	""	"60.7"	""	"74.5"	""	"128.1"	"0.5"	"130.9"	"129.3"	""	"730"	"50"	"35.000"	"28.000"	"0.000332118344510772"	"16"	"0"	"0.0001593"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"8/66"	"8"	"66"	"714421.830322266"	"HCD"	"MS2"	"0"	"62.4"	"100.000"	"69.7820"	"22938"	"22938"	"22913"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.2"	""	"61.6"	""	"83.3"	""	"123.2"	""	"136.7"	"126.2"	""	"730"	"56"	"35.000"	"28.000"	"8.85712684705081E-05"	"17"	"0"	"0.0001623"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"7/66"	"7"	"66"	"1510567.9262085"	"HCD"	"MS2"	"18.50844"	"128.7"	"100.000"	"61.2818"	"19423"	"19423"	"19401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.2"	""	"139.1"	""	"155.8"	""	"249.7"	"0.9"	"263.9"	"270.9"	""	"730"	"39"	"35.000"	"28.000"	"0.00474561895982151"	"21"	"0.0001889"	"0.0005227"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"8/66"	"8"	"66"	"1790456.48236084"	"HCD"	"MS2"	"42.03973"	"161.5"	"100.000"	"61.7570"	"19617"	"19617"	"19593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.4"	""	"176.8"	""	"193.6"	""	"298.8"	"5.8"	"321.7"	"351.4"	""	"730"	"32"	"35.000"	"28.000"	"0.0257212970173009"	"20"	"0.0001889"	"0.0004193"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"736.42279"	"1471.83830"	"1471.83833"	"-0.02"	"-0.00001"	"7/66"	"7"	"66"	"18888562.0299683"	"HCD"	"MS2"	"0"	"1080.1"	"85.584"	"54.8904"	"16870"	"16870"	"16853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1069.2"	""	"1072.1"	""	"1183.6"	""	"2229.4"	"10.6"	"2311.2"	"2396.1"	""	"730"	"43"	"35.000"	"28.000"	"0.00173098324619989"	"21"	"0.0001889"	"0.0004529"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"4/66"	"4"	"66"	"91913.8328857422"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"112.2492"	"36464"	"36464"	"36461"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.2"	""	"5.0"	""	"7.9"	""	"12.8"	""	"13.8"	"17.4"	""	"729"	"17"	"35.000"	"28.000"	"0.675612276734699"	"14"	"0.00109"	"0.01504"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"9/66"	"9"	"66"	"162041.059204102"	"HCD"	"MS2"	"4.061104"	"14.0"	"100.000"	"93.1758"	"32125"	"32125"	"32118"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.2"	""	"12.6"	""	"17.3"	""	"31.1"	""	"29.2"	"28.8"	""	"729"	"36"	"35.000"	"28.000"	"0.00917693240168103"	"15"	"0.0001889"	"0.0004065"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"9/66"	"9"	"66"	"124059.754943848"	"HCD"	"MS2"	"5.147924"	"8.8"	"100.000"	"106.5667"	"35506"	"35506"	"35504"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"7.9"	""	"10.9"	""	"17.7"	""	"23.4"	"13.8"	""	"729"	"29"	"35.000"	"28.000"	"0.0476099288724057"	"14"	"0.0001889"	"0.0007965"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"10/66"	"10"	"66"	"153935.510498047"	"HCD"	"MS2"	"4.600543"	"11.4"	"100.000"	"97.2797"	"33399"	"33399"	"33395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.1"	""	"11.1"	""	"11.9"	""	"24.6"	""	"23.4"	"27.7"	""	"729"	"33"	"35.000"	"28.000"	"0.0194848709000196"	"17"	"0.0001889"	"0.0006244"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"7/66"	"7"	"66"	"107675.881896973"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"113.9926"	"36721"	"36721"	"36719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.1"	""	"6.3"	""	"8.1"	""	"17.2"	""	"8.5"	"11.4"	""	"729"	"16"	"35.000"	"28.000"	"0.905102016880235"	"22"	"0.0004166"	"0.002182"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"4/66"	"4"	"66"	"132696.74810791"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"116.3124"	"37111"	"37111"	"37109"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.5"	""	"7.5"	""	"5.9"	""	"15.4"	""	"18.6"	"15.1"	""	"729"	"16"	"35.000"	"28.000"	"0.9924246267944"	"13"	"0.0004166"	"0.002158"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"10/66"	"10"	"66"	"144161.302001953"	"HCD"	"MS2"	"6.631208"	"8.3"	"100.000"	"118.6722"	"37524"	"37524"	"37521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"11.8"	""	"6.5"	""	"17.3"	""	"19.6"	"14.5"	""	"729"	"17"	"35.000"	"28.000"	"0.795605052866774"	"14"	"0.0004166"	"0.002231"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"5/66"	"5"	"66"	"147814.690429688"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"119.3923"	"37642"	"37642"	"37639"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"7.8"	""	"8.4"	""	"15.6"	""	"20.6"	"13.9"	""	"729"	"14"	"35.000"	"28.000"	"1.39218686721197"	"13"	"0.0003839"	"0.002105"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"4/66"	"4"	"66"	"153739.850036621"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"118.4184"	"37482"	"37482"	"37480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"8.1"	""	"10.2"	""	"20.2"	""	"17.5"	"16.5"	""	"729"	"16"	"35.000"	"28.000"	"1.02730057844589"	"13"	"0.0009727"	"0.01074"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"11/66"	"11"	"66"	"282851.41394043"	"HCD"	"MS2"	"6.339511"	"22.7"	"100.000"	"86.5396"	"29755"	"29755"	"29733"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.7"	""	"24.5"	""	"27.8"	""	"37.9"	""	"48.7"	"57.3"	""	"729"	"36"	"35.000"	"28.000"	"0.00969834284296667"	"15"	"0.0001889"	"0.0004788"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"10/66"	"10"	"66"	"225238.012573242"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"98.5797"	"33770"	"33770"	"33763"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.3"	""	"13.9"	""	"13.4"	""	"25.2"	""	"25.8"	"27.3"	""	"729"	"36"	"35.000"	"28.000"	"0.00947758160773742"	"16"	"0.0001889"	"0.001026"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"11/66"	"11"	"66"	"320404.788818359"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"83.1615"	"28385"	"28385"	"28365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.6"	""	"24.2"	""	"33.5"	""	"45.7"	""	"51.8"	"52.4"	""	"729"	"39"	"35.000"	"28.000"	"0.004599361363583"	"15"	"0.0001889"	"0.0003962"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"5/66"	"5"	"66"	"421655.253479004"	"HCD"	"MS2"	"40.18989"	"32.4"	"100.000"	"80.7454"	"27349"	"27349"	"27328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.9"	""	"32.8"	""	"38.8"	""	"68.2"	"1.0"	"66.2"	"65.6"	""	"729"	"36"	"35.000"	"28.000"	"0.00976556854396538"	"15"	"0.0001889"	"0.0004783"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"9/66"	"9"	"66"	"185785.764343262"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"111.9923"	"36423"	"36423"	"36420"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"7.7"	""	"10.1"	""	"17.5"	""	"17.0"	"15.3"	""	"729"	"24"	"35.000"	"28.000"	"0.14511006366675"	"14"	"0.0004166"	"0.002259"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"11/66"	"11"	"66"	"437952.963256836"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"78.3540"	"26425"	"26425"	"26399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.0"	""	"36.4"	""	"51.9"	""	"72.1"	"1.0"	"74.2"	"78.8"	""	"729"	"33"	"35.000"	"28.000"	"0.0189975472197802"	"15"	"0.0001889"	"0.0005254"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"736.42285"	"1471.83843"	"1471.83833"	"0.07"	"0.00005"	"7/66"	"7"	"66"	"700933.853393555"	"HCD"	"MS2"	"14.75775"	"58.1"	"100.000"	"68.9646"	"22553"	"22553"	"22522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.7"	""	"67.6"	""	"76.5"	""	"114.3"	"0.8"	"113.7"	"120.3"	""	"729"	"43"	"35.000"	"28.000"	"0.00170097344124558"	"20"	"0.0001308"	"0.000243"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"491.28433"	"1471.83844"	"1471.83833"	"0.08"	"0.00004"	"8/66"	"8"	"66"	"7383422.61407471"	"HCD"	"MS2"	"38.15557"	"209.9"	"100.000"	"56.1864"	"17346"	"17346"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.1"	""	"183.6"	""	"248.6"	""	"282.7"	"2.3"	"677.7"	"428.6"	""	"729"	"23"	"35.000"	"28.000"	"0.188667690245982"	"15"	"0.0003839"	"0.001741"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"491.28433"	"1471.83844"	"1471.83833"	"0.08"	"0.00004"	"10/66"	"10"	"66"	"106511981.154297"	"HCD"	"MS2"	"56.88155"	"2300.7"	"85.579"	"53.0790"	"16147"	"16147"	"16118"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2034.3"	""	"2127.1"	""	"2468.9"	""	"5242.9"	""	"5050.7"	"5150.6"	""	"729"	"41"	"35.000"	"28.000"	"0.00314555680661061"	"19"	"0.0006037"	"0.003735"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"491.28436"	"1471.83854"	"1471.83833"	"0.14"	"0.00007"	"9/66"	"9"	"66"	"259133.253173828"	"HCD"	"MS2"	"40.48557"	"10.1"	"100.000"	"87.0559"	"29913"	"29913"	"29884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"14.3"	""	"13.0"	""	"17.5"	""	"21.4"	"19.7"	""	"729"	"38"	"35.000"	"28.000"	"0.0058169794916779"	"16"	"0.0004166"	"0.002236"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"9/66"	"9"	"66"	"124924.289916992"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"103.0770"	"34851"	"34851"	"34847"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"10.0"	""	"8.6"	""	"20.6"	""	"19.2"	"16.2"	""	"729"	"21"	"35.000"	"28.000"	"0.279059963219153"	"15"	"0.0003839"	"0.001608"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"5/66"	"5"	"66"	"158824.906860352"	"HCD"	"MS2"	"6.024125"	"14.6"	"100.000"	"89.7533"	"30942"	"30942"	"30925"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.5"	""	"17.0"	""	"19.9"	""	"31.1"	""	"27.8"	"29.1"	""	"729"	"26"	"35.000"	"28.000"	"0.0872363593209764"	"14"	"0.000523"	"0.002801"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"4/66"	"4"	"66"	"109830.59185791"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"114.0558"	"36747"	"36747"	"36744"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"6.1"	""	"8.3"	""	"13.3"	""	"23.7"	"16.6"	""	"729"	"22"	"35.000"	"28.000"	"0.217118851316324"	"15"	"0.0003571"	"0.001536"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"9/66"	"9"	"66"	"147437.890014648"	"HCD"	"MS2"	"10.16098"	"11.9"	"100.000"	"99.8690"	"34126"	"34126"	"34124"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"13.1"	""	"13.8"	""	"23.6"	""	"28.3"	"25.6"	""	"729"	"30"	"35.000"	"28.000"	"0.0341741351524483"	"15"	"0.0003839"	"0.00169"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"11/66"	"11"	"66"	"131760.49432373"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"115.8514"	"37051"	"37051"	"37048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"6.5"	""	"7.3"	""	"18.3"	""	"16.4"	"20.3"	""	"729"	"27"	"35.000"	"28.000"	"0.0765063587580775"	"14"	"0.0001859"	"0.0003399"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"10/66"	"10"	"66"	"129910.852111816"	"HCD"	"MS2"	"10.48637"	"8.9"	"100.000"	"108.9384"	"35918"	"35918"	"35916"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.7"	""	"8.1"	""	"10.9"	""	"18.5"	""	"18.8"	"18.9"	""	"729"	"25"	"35.000"	"28.000"	"0.103680607366477"	"14"	"0.0001889"	"0.0005502"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"10/66"	"10"	"66"	"151724.762145996"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"100.9392"	"34397"	"34397"	"34393"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.2"	""	"6.0"	""	"16.0"	""	"23.1"	""	"24.7"	"21.7"	""	"729"	"31"	"35.000"	"28.000"	"0.0284903334772446"	"14"	"0.0001889"	"0.0009775"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"11/66"	"11"	"66"	"151490.266296387"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"103.5888"	"34968"	"34968"	"34966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"9.0"	""	"10.6"	""	"22.4"	""	"18.1"	"20.0"	""	"729"	"30"	"35.000"	"28.000"	"0.0361158243913414"	"14"	"0.0001889"	"0.0005082"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"11/66"	"11"	"66"	"175556.690246582"	"HCD"	"MS2"	"3.946525"	"12.5"	"100.000"	"95.4400"	"32857"	"32857"	"32854"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.3"	""	"12.1"	""	"15.6"	""	"26.7"	""	"26.2"	"27.9"	""	"729"	"34"	"35.000"	"28.000"	"0.013542459100592"	"16"	"0.0001889"	"0.0007122"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"10/66"	"10"	"66"	"172075.993652344"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"100.5097"	"34272"	"34272"	"34267"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.8"	""	"10.1"	""	"12.5"	""	"27.4"	""	"21.9"	"27.3"	""	"729"	"28"	"35.000"	"28.000"	"0.0596619622060437"	"16"	"0.0002277"	"0.001236"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"8/66"	"8"	"66"	"181624.136230469"	"HCD"	"MS2"	"9.705274"	"8.2"	"100.000"	"113.7992"	"36708"	"36708"	"36704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"9.1"	""	"7.9"	""	"20.2"	""	"17.4"	"17.1"	""	"729"	"28"	"35.000"	"28.000"	"0.0547895246639813"	"18"	"0.0004166"	"0.002271"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"10/66"	"10"	"66"	"556152.670166016"	"HCD"	"MS2"	"8.26253"	"44.2"	"100.000"	"75.1988"	"25097"	"25097"	"25073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.8"	""	"50.0"	""	"55.5"	""	"74.2"	"0.2"	"92.1"	"95.5"	""	"729"	"32"	"35.000"	"28.000"	"0.0230514119826632"	"14"	"0.0001889"	"0.000539"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"7/66"	"7"	"66"	"578139.936218262"	"HCD"	"MS2"	"25.3586"	"42.3"	"100.000"	"75.0297"	"25080"	"25080"	"25055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.7"	""	"51.0"	""	"47.9"	""	"81.6"	"0.2"	"85.4"	"84.7"	""	"729"	"42"	"35.000"	"28.000"	"0.00242492065435535"	"16"	"0"	"0.0001179"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"8/66"	"8"	"66"	"817620.062438965"	"HCD"	"MS2"	"0"	"66.6"	"100.000"	"67.7437"	"22055"	"22055"	"22029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.5"	""	"76.7"	""	"78.6"	""	"129.4"	""	"134.9"	"143.2"	""	"729"	"38"	"35.000"	"28.000"	"0.00561949815100115"	"15"	"0.0001308"	"0.000238"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"11/66"	"11"	"66"	"797141.720275879"	"HCD"	"MS2"	"0"	"67.1"	"100.000"	"71.9013"	"23803"	"23803"	"23777"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.5"	""	"75.3"	""	"87.1"	""	"124.9"	"0.7"	"141.2"	"133.3"	""	"729"	"26"	"35.000"	"28.000"	"0.0856441163199208"	"14"	"0.0001889"	"0.0004023"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"7/66"	"7"	"66"	"12964261.7713013"	"HCD"	"MS2"	"9.721511"	"593.0"	"62.026"	"55.8220"	"17197"	"17197"	"17179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"406.5"	""	"376.1"	""	"601.1"	""	"754.3"	"9.8"	"2344.1"	"1197.1"	""	"729"	"41"	"35.000"	"28.000"	"0.00280994314473985"	"22"	"0.0001889"	"0.0004152"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"736.42291"	"1471.83855"	"1471.83833"	"0.15"	"0.00011"	"7/66"	"7"	"66"	"10287939.9135132"	"HCD"	"MS2"	"25.98358"	"522.6"	"74.659"	"55.5246"	"17129"	"17129"	"17109"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"653.5"	""	"544.4"	""	"655.2"	""	"929.0"	"11.3"	"1056.1"	"1113.3"	""	"729"	"34"	"35.000"	"28.000"	"0.0130526151323911"	"15"	"0.0001889"	"0.0005087"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28439"	"1471.83863"	"1471.83833"	"0.20"	"0.00010"	"9/66"	"9"	"66"	"15765124.2701416"	"HCD"	"MS2"	"11.98559"	"355.6"	"78.662"	"56.1550"	"17387"	"17387"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.4"	""	"116.6"	""	"276.9"	""	"312.4"	""	"1925.4"	"706.1"	""	"727"	"30"	"35.000"	"28.000"	"0.0331515940105873"	"15"	"0.0001889"	"0.001097"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"9/66"	"9"	"66"	"125785.36932373"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"88.9581"	"30691"	"30691"	"30684"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.9"	""	"11.3"	""	"17.2"	""	"20.1"	""	"19.8"	"22.0"	""	"727"	"36"	"35.000"	"28.000"	"0.00826997916085648"	"20"	"0.0001889"	"0.0004018"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"9/66"	"9"	"66"	"128461.145935059"	"HCD"	"MS2"	"7.954472"	"9.8"	"100.000"	"116.1031"	"37093"	"37093"	"37091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.4"	""	"9.4"	""	"12.3"	""	"21.5"	""	"22.2"	"20.0"	""	"727"	"27"	"35.000"	"28.000"	"0.0683131662907988"	"14"	"0.0003146"	"0.001433"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"11/66"	"11"	"66"	"148854.401916504"	"HCD"	"MS2"	"5.424676"	"10.7"	"100.000"	"99.0054"	"33889"	"33889"	"33884"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.4"	""	"12.5"	""	"12.4"	"1.6"	"20.6"	""	"20.0"	"23.0"	""	"727"	"38"	"35.000"	"28.000"	"0.00586819335406427"	"20"	"0.0001889"	"0.0005011"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"5/66"	"5"	"66"	"104186.459350586"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"113.7346"	"36684"	"36684"	"36682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	"7.9"	""	"7.8"	""	"16.4"	""	"9.1"	"14.6"	""	"727"	"17"	"35.000"	"28.000"	"0.687866905377448"	"14"	"0.0005564"	"0.003643"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"11/66"	"11"	"66"	"159913.067260742"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"91.6195"	"31607"	"31607"	"31601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.0"	""	"15.6"	""	"19.5"	""	"21.6"	""	"30.7"	"28.8"	""	"727"	"43"	"35.000"	"28.000"	"0.00191648054627196"	"17"	"7.476E-05"	"0.0001892"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"4/66"	"4"	"66"	"130832.83190918"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"116.6192"	"37179"	"37179"	"37176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"7.2"	""	"10.4"	""	"13.6"	""	"17.1"	"15.9"	""	"727"	"19"	"35.000"	"28.000"	"0.488095063373613"	"14"	"0.0006037"	"0.005221"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"8/66"	"8"	"66"	"105900.893188477"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"112.1990"	"36453"	"36453"	"36451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.7"	""	"3.4"	""	"4.9"	""	"8.1"	""	"10.5"	"12.5"	""	"727"	"21"	"35.000"	"28.000"	"0.262726823609389"	"14"	"0.000523"	"0.002815"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"10/66"	"10"	"66"	"119458.612121582"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"110.4012"	"36171"	"36171"	"36168"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"9.1"	""	"7.6"	""	"15.2"	""	"15.0"	"16.7"	""	"727"	"23"	"35.000"	"28.000"	"0.165769418948296"	"15"	"0.0002277"	"0.001203"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"4/66"	"4"	"66"	"134117.282775879"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"118.3634"	"37456"	"37456"	"37454"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.9"	""	"10.4"	""	"6.9"	""	"19.5"	""	"15.8"	"18.1"	""	"727"	"16"	"35.000"	"28.000"	"0.996562211495786"	"13"	"0.0006037"	"0.006156"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"10/66"	"10"	"66"	"137393.38293457"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"105.1364"	"35256"	"35256"	"35254"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"10.2"	""	"7.3"	""	"15.8"	""	"14.1"	"17.4"	""	"727"	"37"	"35.000"	"28.000"	"0.00653889577649314"	"21"	"0.0001889"	"0.0007951"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"10/66"	"10"	"66"	"143144.130615234"	"HCD"	"MS2"	"8.01907"	"9.1"	"100.000"	"105.3948"	"35298"	"35298"	"35296"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"7.8"	""	"9.9"	""	"22.1"	""	"22.2"	"17.9"	""	"727"	"27"	"35.000"	"28.000"	"0.0804459926941649"	"14"	"0.0001889"	"0.0005276"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"9/66"	"9"	"66"	"165329.969665527"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"99.7834"	"34117"	"34117"	"34115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.9"	""	"9.9"	""	"15.4"	""	"23.9"	""	"21.9"	"22.0"	""	"727"	"23"	"35.000"	"28.000"	"0.170806508477996"	"15"	"0.0003571"	"0.001505"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"9/66"	"9"	"66"	"174368.764526367"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"104.3622"	"35118"	"35118"	"35115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.7"	""	"9.0"	""	"13.1"	""	"18.2"	""	"18.3"	"18.2"	""	"727"	"24"	"35.000"	"28.000"	"0.145715051857525"	"17"	"0.0002277"	"0.001318"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"7/66"	"7"	"66"	"578030.022399902"	"HCD"	"MS2"	"15.29664"	"53.5"	"100.000"	"70.2626"	"23082"	"23082"	"23059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.3"	""	"54.7"	""	"66.9"	""	"103.6"	""	"107.9"	"116.3"	""	"727"	"42"	"35.000"	"28.000"	"0.0021552835548483"	"21"	"0"	"0.0001648"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"736.42297"	"1471.83867"	"1471.83833"	"0.23"	"0.00017"	"7/66"	"7"	"66"	"4159278.03411865"	"HCD"	"MS2"	"6.547884"	"338.8"	"100.000"	"58.5254"	"18302"	"18302"	"18281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"418.3"	""	"384.4"	""	"438.8"	""	"584.6"	"4.3"	"681.2"	"705.0"	""	"727"	"37"	"35.000"	"28.000"	"0.00786148183374772"	"16"	"0.0001308"	"0.0002263"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28442"	"1471.83872"	"1471.83833"	"0.26"	"0.00013"	"8/66"	"8"	"66"	"219541.181518555"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"115.8891"	"37040"	"37040"	"37037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.9"	""	"4.8"	""	"7.3"	""	"11.0"	""	"10.7"	"7.2"	""	"779"	"20"	"35.000"	"28.000"	"0.395828865873135"	"14"	"0.0004166"	"0.002353"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42303"	"1471.83879"	"1471.83833"	"0.32"	"0.00023"	"5/66"	"5"	"66"	"131925.442077637"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"117.1367"	"37266"	"37266"	"37264"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"9.0"	""	"14.1"	""	"14.6"	""	"20.3"	"18.4"	""	"792"	"16"	"35.000"	"28.000"	"1.05607603115051"	"13"	"0.0009727"	"0.01039"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"736.42303"	"1471.83879"	"1471.83833"	"0.32"	"0.00023"	"10/66"	"10"	"66"	"139504.129516602"	"HCD"	"MS2"	"6.759902"	"7.8"	"100.000"	"105.6529"	"35340"	"35340"	"35338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"7.8"	""	"10.1"	""	"15.3"	""	"14.3"	"18.3"	""	"792"	"34"	"35.000"	"28.000"	"0.016058138003756"	"16"	"0.0001889"	"0.0006653"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"736.42303"	"1471.83879"	"1471.83833"	"0.32"	"0.00023"	"9/66"	"9"	"66"	"138745.41986084"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"110.9739"	"36262"	"36262"	"36259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"10.9"	""	"8.1"	""	"15.8"	""	"22.4"	"20.0"	""	"792"	"23"	"35.000"	"28.000"	"0.21811984777654"	"20"	"0.0002277"	"0.001299"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"736.42303"	"1471.83879"	"1471.83833"	"0.32"	"0.00023"	"10/66"	"10"	"66"	"195785.528686523"	"HCD"	"MS2"	"4.790578"	"15.4"	"100.000"	"87.5618"	"30166"	"30166"	"30158"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.9"	""	"16.6"	""	"20.3"	""	"29.5"	""	"34.0"	"32.0"	""	"792"	"34"	"35.000"	"28.000"	"0.0164700601755633"	"19"	"0.0002277"	"0.001117"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"736.42303"	"1471.83879"	"1471.83833"	"0.32"	"0.00023"	"5/66"	"5"	"66"	"144150.959838867"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"106.4106"	"35474"	"35474"	"35471"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.2"	""	"6.4"	""	"11.6"	""	"19.2"	""	"21.5"	"15.5"	""	"792"	"25"	"35.000"	"28.000"	"0.113944977223532"	"15"	"0.0003839"	"0.0019"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42303"	"1471.83879"	"1471.83833"	"0.32"	"0.00023"	"5/66"	"5"	"66"	"168699.491638184"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"92.1467"	"31793"	"31793"	"31788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.9"	""	"12.4"	""	"14.5"	""	"29.4"	""	"26.1"	"23.2"	""	"792"	"27"	"35.000"	"28.000"	"0.0715640953900327"	"14"	"0.0003839"	"0.001667"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42303"	"1471.83879"	"1471.83833"	"0.32"	"0.00023"	"9/66"	"9"	"66"	"154509.587158203"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"110.2102"	"36138"	"36138"	"36135"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.9"	""	"4.9"	""	"7.9"	""	"25.2"	""	"15.5"	"26.8"	""	"792"	"22"	"35.000"	"28.000"	"0.226305540122059"	"14"	"0.0003839"	"0.001885"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"736.42303"	"1471.83879"	"1471.83833"	"0.32"	"0.00023"	"7/66"	"7"	"66"	"341474.078979492"	"HCD"	"MS2"	"13.52088"	"27.3"	"100.000"	"81.0518"	"27525"	"27525"	"27502"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.1"	""	"32.3"	""	"26.2"	""	"55.5"	"1.2"	"57.7"	"54.8"	""	"792"	"44"	"35.000"	"28.000"	"0.00153001322913411"	"23"	"0"	"0.0001741"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42303"	"1471.83879"	"1471.83833"	"0.32"	"0.00023"	"10/66"	"10"	"66"	"412159.641479492"	"HCD"	"MS2"	"23.9891"	"34.5"	"100.000"	"81.3592"	"27650"	"27650"	"27630"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.7"	""	"36.2"	""	"47.0"	""	"68.0"	"1.2"	"66.0"	"69.4"	""	"792"	"29"	"35.000"	"28.000"	"0.0552961870978151"	"14"	"0.0001889"	"0.0006928"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"736.42303"	"1471.83879"	"1471.83833"	"0.32"	"0.00023"	"7/66"	"7"	"66"	"1975893588.09375"	"HCD"	"MS2"	"0.02864649"	"531.8"	"0.385"	"53.3175"	"16243"	"16243"	"16237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"512.2"	""	"504.9"	""	"599.9"	""	"1145.0"	"4.5"	"1168.7"	"1122.4"	""	"792"	"46"	"35.000"	"28.000"	"0.00111607964078072"	"21"	"0.001217"	"0.01776"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"491.28448"	"1471.83890"	"1471.83833"	"0.39"	"0.00019"	"10/66"	"10"	"66"	"204211565.848389"	"HCD"	"MS2"	"4.252942"	"1639.4"	"28.247"	"52.8921"	"16020"	"16020"	"16002"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1567.3"	""	"1637.8"	""	"1847.2"	""	"3660.6"	""	"3536.9"	"3460.1"	""	"792"	"44"	"35.000"	"28.000"	"0.00144442562982541"	"19"	"0.0006037"	"0.005018"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"10/66"	"10"	"66"	"155350.890808105"	"HCD"	"MS2"	"25.95292"	"13.0"	"100.000"	"89.4513"	"30824"	"30824"	"30808"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.1"	""	"14.1"	""	"16.0"	""	"29.8"	""	"27.8"	"27.7"	""	"792"	"38"	"35.000"	"28.000"	"0.00655684905533933"	"21"	"0.0001889"	"0.0006865"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"5/66"	"5"	"66"	"115246.701782227"	"HCD"	"MS2"	"3.960592"	"7.8"	"100.000"	"110.6541"	"36211"	"36211"	"36209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"7.1"	""	"8.6"	""	"22.7"	""	"15.5"	"13.5"	""	"792"	"19"	"35.000"	"28.000"	"0.549155308233268"	"14"	"0.0006037"	"0.005365"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"10/66"	"10"	"66"	"160582.716064453"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"89.7627"	"30983"	"30983"	"30978"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.8"	""	"10.4"	""	"16.2"	""	"27.6"	""	"25.5"	"33.6"	""	"792"	"34"	"35.000"	"28.000"	"0.0158743220180412"	"17"	"0.0001889"	"0.0008561"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"10/66"	"10"	"66"	"121642.695251465"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"114.8253"	"36874"	"36874"	"36872"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"8.0"	""	"12.3"	""	"19.6"	""	"17.4"	"16.6"	""	"792"	"27"	"35.000"	"28.000"	"0.0866353603084023"	"14"	"0.0002277"	"0.001203"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"5/66"	"5"	"66"	"127182.924499512"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"111.4765"	"36342"	"36342"	"36340"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.7"	""	"9.2"	""	"13.4"	""	"18.9"	""	"15.3"	"19.2"	""	"792"	"18"	"35.000"	"28.000"	"0.686586383110639"	"14"	"0.000523"	"0.00321"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"10/66"	"10"	"66"	"131617.534179688"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"118.1645"	"37441"	"37441"	"37439"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"6.7"	""	"9.8"	""	"19.1"	""	"15.9"	"14.0"	""	"792"	"27"	"35.000"	"28.000"	"0.0886533570873063"	"23"	"0.0002277"	"0.001166"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"10/66"	"10"	"66"	"116169.664978027"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"113.0197"	"36585"	"36585"	"36583"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"7.6"	""	"9.5"	""	"14.5"	""	"19.5"	"15.4"	""	"792"	"32"	"35.000"	"28.000"	"0.0246998994851038"	"15"	"0.0001308"	"0.0002881"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"7/66"	"7"	"66"	"136068.713256836"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"115.3359"	"36955"	"36955"	"36953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"5.7"	""	"9.2"	""	"19.9"	""	"22.8"	"19.4"	""	"792"	"21"	"35.000"	"28.000"	"0.282289799930102"	"14"	"0.0003839"	"0.001542"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"10/66"	"10"	"66"	"161930.654968262"	"HCD"	"MS2"	"8.046368"	"12.0"	"100.000"	"90.2887"	"31143"	"31143"	"31140"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"10.2"	""	"12.8"	""	"27.3"	""	"22.6"	"29.7"	""	"792"	"34"	"35.000"	"28.000"	"0.0157287853589898"	"15"	"0.0001889"	"0.0005217"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"10/66"	"10"	"66"	"130319.356140137"	"HCD"	"MS2"	"15.67818"	"7.8"	"100.000"	"113.5397"	"36668"	"36668"	"36664"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.3"	""	"8.7"	""	"8.7"	""	"15.5"	""	"17.5"	"16.9"	""	"792"	"23"	"35.000"	"28.000"	"0.222174998508858"	"14"	"0.0007793"	"0.007381"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"11/66"	"11"	"66"	"174627.714477539"	"HCD"	"MS2"	"7.178931"	"15.0"	"100.000"	"88.6391"	"30532"	"30532"	"30518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.0"	""	"10.8"	""	"19.7"	""	"40.1"	""	"25.2"	"30.0"	""	"792"	"27"	"35.000"	"28.000"	"0.0835016747373582"	"15"	"0.0001859"	"0.0003617"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"7/66"	"7"	"66"	"361275.489196777"	"HCD"	"MS2"	"11.7067"	"26.8"	"100.000"	"81.0638"	"27479"	"27479"	"27456"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.7"	""	"28.1"	""	"28.5"	""	"53.2"	"0.4"	"56.9"	"59.5"	""	"792"	"44"	"35.000"	"28.000"	"0.00154772994733791"	"23"	"0"	"0.0001187"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"8/66"	"8"	"66"	"1113555.46661377"	"HCD"	"MS2"	"7.064373"	"92.7"	"100.000"	"63.6414"	"20387"	"20387"	"20361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.0"	""	"103.2"	""	"108.7"	""	"166.9"	""	"194.0"	"210.3"	""	"792"	"42"	"35.000"	"28.000"	"0.00263448169855889"	"22"	"0.0001308"	"0.0002609"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"736.42310"	"1471.83891"	"1471.83833"	"0.40"	"0.00029"	"7/66"	"7"	"66"	"99070582.1723633"	"HCD"	"MS2"	"0"	"3218.7"	"55.991"	"53.0492"	"16135"	"16135"	"16118"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3201.9"	""	"3153.4"	""	"3609.3"	""	"7398.0"	""	"6743.6"	"6722.8"	""	"792"	"45"	"35.000"	"28.000"	"0.00122375699127538"	"21"	"0.0003839"	"0.00192"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28452"	"1471.83899"	"1471.83833"	"0.45"	"0.00022"	"9/66"	"9"	"66"	"200384.800476074"	"HCD"	"MS2"	"18.65201"	"4.8"	"100.000"	"115.5728"	"36999"	"36999"	"36997"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.7"	""	"6.7"	""	"6.0"	""	"8.8"	""	"7.4"	"10.1"	""	"792"	"27"	"35.000"	"28.000"	"0.08273612678182"	"14"	"0.0001889"	"0.000937"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28452"	"1471.83899"	"1471.83833"	"0.45"	"0.00022"	"8/66"	"8"	"66"	"194149.402709961"	"HCD"	"MS2"	"26.4462"	"4.8"	"100.000"	"115.8428"	"37049"	"37049"	"37047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"5.1"	""	"5.7"	""	"8.7"	""	"8.8"	"10.5"	""	"792"	"26"	"35.000"	"28.000"	"0.0903015460512165"	"14"	"0.0003839"	"0.00159"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"9/66"	"9"	"66"	"140016.924255371"	"HCD"	"MS2"	"8.747592"	"10.0"	"100.000"	"107.9157"	"35741"	"35741"	"35739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.7"	""	"9.7"	""	"14.9"	""	"16.5"	""	"17.7"	"25.9"	""	"792"	"26"	"35.000"	"28.000"	"0.102966318701345"	"17"	"0.0001889"	"0.0003959"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"9/66"	"9"	"66"	"130110.792785645"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"114.5659"	"36832"	"36832"	"36830"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"6.7"	""	"9.9"	""	"17.0"	""	"16.2"	"18.9"	""	"792"	"19"	"35.000"	"28.000"	"0.534189301506295"	"18"	"0.0003571"	"0.0015"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"7/66"	"7"	"66"	"247158.733825684"	"HCD"	"MS2"	"5.521418"	"21.5"	"100.000"	"85.9200"	"29453"	"29453"	"29432"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.8"	""	"16.3"	""	"30.5"	""	"38.4"	""	"49.3"	"51.5"	""	"792"	"42"	"35.000"	"28.000"	"0.00258044844048094"	"26"	"0"	"0.0001393"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"9/66"	"9"	"66"	"206741.349243164"	"HCD"	"MS2"	"4.422123"	"18.7"	"100.000"	"87.4784"	"30082"	"30082"	"30074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.9"	""	"15.5"	""	"19.3"	""	"38.4"	""	"39.9"	"44.8"	""	"792"	"25"	"35.000"	"28.000"	"0.139860535237615"	"14"	"0.0004166"	"0.002344"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"11/66"	"11"	"66"	"142514.516784668"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"110.4644"	"36180"	"36180"	"36177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"5.9"	""	"11.8"	""	"21.5"	""	"14.8"	"18.4"	""	"792"	"22"	"35.000"	"28.000"	"0.261032862516751"	"14"	"0.0001889"	"0.00103"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"5/66"	"5"	"66"	"121891.81036377"	"HCD"	"MS2"	"5.851196"	"6.7"	"100.000"	"112.9753"	"36568"	"36568"	"36566"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"9.0"	""	"6.2"	""	"14.2"	""	"12.8"	"18.2"	""	"792"	"12"	"35.000"	"28.000"	"2.37517266197182"	"13"	"0.00103"	"0.01241"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"11/66"	"11"	"66"	"809381.035095215"	"HCD"	"MS2"	"25.06577"	"43.5"	"100.000"	"82.0795"	"27893"	"27893"	"27872"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.2"	""	"41.6"	""	"56.2"	""	"77.5"	""	"84.7"	"99.0"	""	"792"	"12"	"35.000"	"28.000"	"2.7905845531099"	"14"	"0.0006037"	"0.005524"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"7/66"	"7"	"66"	"1728455.72735596"	"HCD"	"MS2"	"19.4568"	"145.9"	"100.000"	"59.9585"	"18883"	"18883"	"18857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.1"	""	"165.4"	""	"172.1"	""	"247.8"	""	"303.8"	"323.1"	""	"792"	"41"	"35.000"	"28.000"	"0.0032560808937904"	"21"	"0.0001859"	"0.000374"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"7/66"	"7"	"66"	"1866704334.23438"	"HCD"	"MS2"	"0.03428518"	"484.4"	"0.404"	"53.5853"	"16346"	"16346"	"16340"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"469.7"	""	"437.7"	""	"560.1"	""	"1039.0"	"2.2"	"1032.1"	"1065.2"	""	"792"	"46"	"35.000"	"28.000"	"0.00110330398277739"	"21"	"0.001158"	"0.01531"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"7/66"	"7"	"66"	"45814449.7741699"	"HCD"	"MS2"	"0.1401933"	"484.1"	"15.518"	"54.5784"	"16689"	"16689"	"16672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"456.3"	""	"500.2"	""	"570.7"	""	"962.1"	"3.9"	"1053.2"	"1058.0"	""	"792"	"43"	"35.000"	"28.000"	"0.001818424130834"	"21"	"0.0001889"	"0.0007693"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"736.42316"	"1471.83904"	"1471.83833"	"0.48"	"0.00035"	"14/66"	"14"	"66"	"10896386.0611572"	"HCD"	"MS2"	"16.62686"	"738.7"	"100.000"	"58.3775"	"18295"	"18295"	"18277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"762.2"	""	"817.8"	""	"939.8"	""	"1410.2"	"12.3"	"1513.1"	"1562.3"	""	"792"	"46"	"35.000"	"28.000"	"0.000941228753503451"	"22"	"0.0001889"	"0.0004674"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28455"	"1471.83908"	"1471.83833"	"0.51"	"0.00025"	"8/66"	"8"	"66"	"6857278.61376953"	"HCD"	"MS2"	"28.83079"	"204.8"	"100.000"	"55.5643"	"17092"	"17092"	"17067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"239.4"	""	"252.0"	""	"247.3"	""	"373.4"	"0.0"	"417.0"	"415.3"	""	"790"	"26"	"35.000"	"28.000"	"0.0978581712765147"	"14"	"0.0001889"	"0.0007699"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"9/66"	"9"	"66"	"123999.582824707"	"HCD"	"MS2"	"5.195853"	"8.8"	"100.000"	"111.2253"	"36301"	"36301"	"36299"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.3"	""	"9.5"	""	"10.0"	""	"16.8"	""	"18.5"	"21.1"	""	"790"	"22"	"35.000"	"28.000"	"0.245808612641818"	"14"	"0.0003839"	"0.001666"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"5/66"	"5"	"66"	"154652.185302734"	"HCD"	"MS2"	"17.49953"	"10.6"	"100.000"	"97.7952"	"33555"	"33555"	"33551"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.8"	""	"11.8"	""	"12.2"	""	"23.5"	""	"18.1"	"21.2"	""	"790"	"30"	"35.000"	"28.000"	"0.0383351437061968"	"15"	"0.0003146"	"0.001473"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"5/66"	"5"	"66"	"137088.278991699"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"101.0297"	"34405"	"34405"	"34403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"8.2"	""	"13.2"	""	"15.4"	""	"25.5"	"22.1"	""	"790"	"33"	"35.000"	"28.000"	"0.0184330455224144"	"19"	"0.0002277"	"0.001294"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"8/66"	"8"	"66"	"120704.074707031"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"111.7279"	"36381"	"36381"	"36379"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"7.6"	""	"13.3"	""	"16.1"	""	"14.1"	"20.7"	""	"790"	"22"	"35.000"	"28.000"	"0.27899543393387"	"14"	"0.000523"	"0.003253"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"10/66"	"10"	"66"	"135671.675109863"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"107.1720"	"35614"	"35614"	"35611"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"15.6"	""	"10.4"	""	"23.3"	""	"18.4"	"17.4"	""	"790"	"23"	"35.000"	"28.000"	"0.196153966972883"	"14"	"0.0002277"	"0.001229"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"9/66"	"9"	"66"	"132394.522155762"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"107.6549"	"35699"	"35699"	"35696"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"9.7"	""	"12.3"	""	"14.6"	""	"17.4"	"21.6"	""	"790"	"21"	"35.000"	"28.000"	"0.330063192201343"	"14"	"0.0003839"	"0.001996"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"10/66"	"10"	"66"	"147901.63067627"	"HCD"	"MS2"	"5.101075"	"8.6"	"100.000"	"106.3089"	"35459"	"35459"	"35457"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"8.1"	""	"11.0"	""	"17.5"	""	"20.2"	"18.5"	""	"790"	"29"	"35.000"	"28.000"	"0.0490452661499002"	"21"	"0.0001889"	"0.0007298"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"10/66"	"10"	"66"	"274100.460754395"	"HCD"	"MS2"	"31.14462"	"20.2"	"100.000"	"87.2081"	"29974"	"29974"	"29951"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.3"	""	"17.7"	""	"26.1"	""	"43.1"	""	"46.5"	"43.3"	""	"790"	"32"	"35.000"	"28.000"	"0.0265214396905751"	"22"	"0.0001308"	"0.0002151"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"7/66"	"7"	"66"	"392598849.814453"	"HCD"	"MS2"	"0.03817568"	"489.8"	"1.905"	"54.2887"	"16571"	"16571"	"16554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.0"	""	"454.3"	""	"547.3"	""	"1013.2"	"7.7"	"1088.8"	"1112.0"	""	"790"	"42"	"35.000"	"28.000"	"0.00242435992040094"	"20"	"0.0006037"	"0.00389"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"8/66"	"8"	"66"	"5955926.84082031"	"HCD"	"MS2"	"13.34158"	"420.6"	"100.000"	"56.4493"	"17453"	"17453"	"17435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"463.7"	""	"445.0"	""	"547.8"	""	"716.1"	"18.0"	"923.4"	"884.0"	""	"790"	"35"	"35.000"	"28.000"	"0.012606574527648"	"15"	"0.0001889"	"0.0004529"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"7/66"	"7"	"66"	"15935359.1224365"	"HCD"	"MS2"	"2.564208"	"540.0"	"51.453"	"54.8863"	"16814"	"16814"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"563.1"	""	"558.3"	""	"628.6"	""	"1081.0"	"3.1"	"1110.3"	"1188.0"	""	"790"	"43"	"35.000"	"28.000"	"0.0018560817289906"	"22"	"0.0001889"	"0.0004506"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"736.42322"	"1471.83916"	"1471.83833"	"0.56"	"0.00042"	"7/66"	"7"	"66"	"7623148.04626465"	"HCD"	"MS2"	"2.219844"	"486.0"	"89.999"	"56.4608"	"17512"	"17512"	"17493"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"451.4"	""	"453.3"	""	"566.8"	""	"801.1"	"17.0"	"1367.8"	"977.2"	""	"790"	"37"	"35.000"	"28.000"	"0.00827174420061102"	"17"	"0.0001889"	"0.0004553"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.28458"	"1471.83918"	"1471.83833"	"0.58"	"0.00028"	"9/66"	"9"	"66"	"229420.844665527"	"HCD"	"MS2"	"24.72577"	"10.1"	"100.000"	"86.7543"	"29842"	"29842"	"29817"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.4"	""	"10.6"	""	"15.2"	""	"18.9"	""	"19.6"	"22.9"	""	"790"	"31"	"35.000"	"28.000"	"0.0299638142136527"	"14"	"0.0001889"	"0.0004051"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42328"	"1471.83928"	"1471.83833"	"0.65"	"0.00048"	"4/66"	"4"	"66"	"140988.606384277"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"106.6664"	"35523"	"35523"	"35520"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.7"	""	"10.0"	""	"9.6"	""	"24.0"	""	"24.9"	"19.8"	""	"789"	"17"	"35.000"	"28.000"	"0.77454562921182"	"14"	"0.0006037"	"0.004652"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42328"	"1471.83928"	"1471.83833"	"0.65"	"0.00048"	"5/66"	"5"	"66"	"143020.323669434"	"HCD"	"MS2"	"13.35834"	"9.0"	"100.000"	"119.9500"	"37758"	"37758"	"37756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.4"	""	"10.1"	""	"8.6"	""	"15.2"	""	"21.1"	"23.0"	""	"789"	"10"	"35.000"	"28.000"	"4.21742149853338"	"13"	"0.0009404"	"0.01016"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"736.42328"	"1471.83928"	"1471.83833"	"0.65"	"0.00048"	"5/66"	"5"	"66"	"156599.784667969"	"HCD"	"MS2"	"11.33446"	"11.1"	"100.000"	"89.4948"	"30880"	"30880"	"30872"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.3"	""	"10.8"	""	"14.4"	""	"19.0"	""	"25.1"	"27.5"	""	"789"	"33"	"35.000"	"28.000"	"0.0214806296546335"	"20"	"0.0002277"	"0.001295"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"736.42328"	"1471.83928"	"1471.83833"	"0.65"	"0.00048"	"11/66"	"11"	"66"	"215950.29675293"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"93.9745"	"32387"	"32387"	"32376"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.1"	""	"14.0"	""	"16.4"	""	"31.2"	""	"25.5"	"30.0"	""	"789"	"22"	"35.000"	"28.000"	"0.256476162840349"	"17"	"0.0001889"	"0.0007051"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"736.42328"	"1471.83928"	"1471.83833"	"0.65"	"0.00048"	"6/66"	"6"	"66"	"190946.940002441"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"104.6235"	"35170"	"35170"	"35166"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"8.2"	""	"10.0"	""	"15.8"	""	"23.5"	"20.8"	""	"789"	"15"	"35.000"	"28.000"	"1.28542578545293"	"15"	"0.002711"	"0.04205"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"736.42328"	"1471.83928"	"1471.83833"	"0.65"	"0.00048"	"14/66"	"14"	"66"	"10753124.9958496"	"HCD"	"MS2"	"13.66611"	"693.2"	"93.801"	"58.2132"	"18174"	"18174"	"18155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"746.9"	""	"742.1"	""	"870.5"	""	"1337.4"	"16.3"	"1454.0"	"1418.5"	""	"789"	"46"	"35.000"	"28.000"	"0.000929066942496975"	"22"	"0.0001859"	"0.000338"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42334"	"1471.83940"	"1471.83833"	"0.73"	"0.00054"	"9/66"	"9"	"66"	"111015.194519043"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"106.1575"	"35427"	"35427"	"35424"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	"1.7"	"9.8"	""	"11.1"	""	"18.7"	""	"16.4"	"20.5"	""	"789"	"28"	"35.000"	"28.000"	"0.0576828895323175"	"14"	"0.0001889"	"0.001003"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"736.42334"	"1471.83940"	"1471.83833"	"0.73"	"0.00054"	"5/66"	"5"	"66"	"150636.124450684"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"113.2800"	"36627"	"36627"	"36624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"7.2"	""	"9.1"	""	"16.6"	""	"18.0"	"13.2"	""	"789"	"24"	"35.000"	"28.000"	"0.171809434168957"	"18"	"0.0004166"	"0.00221"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"736.42334"	"1471.83940"	"1471.83833"	"0.73"	"0.00054"	"7/66"	"7"	"66"	"7480218.5289917"	"HCD"	"MS2"	"7.577193"	"542.6"	"100.000"	"55.8348"	"17256"	"17256"	"17237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"592.3"	""	"609.4"	""	"670.3"	""	"978.2"	"19.7"	"1134.6"	"1151.6"	""	"789"	"37"	"35.000"	"28.000"	"0.00772764223698113"	"16"	"0.0001889"	"0.0004636"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"736.42334"	"1471.83940"	"1471.83833"	"0.73"	"0.00054"	"7/66"	"7"	"66"	"14687406.944458"	"HCD"	"MS2"	"10.76442"	"633.8"	"58.154"	"56.1310"	"17324"	"17324"	"17307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"400.8"	""	"371.9"	""	"646.4"	""	"766.7"	"18.0"	"2625.3"	"1256.6"	""	"789"	"41"	"35.000"	"28.000"	"0.00325122486372629"	"22"	"0.0001889"	"0.000664"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"736.42334"	"1471.83940"	"1471.83833"	"0.73"	"0.00054"	"7/66"	"7"	"66"	"348427167.499023"	"HCD"	"MS2"	"0.1351721"	"2819.1"	"13.124"	"52.8877"	"16019"	"16019"	"16002"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2852.7"	""	"2739.7"	""	"3190.2"	""	"6314.7"	""	"5894.0"	"5857.2"	""	"789"	"45"	"35.000"	"28.000"	"0.00117773344316313"	"21"	"0.0006037"	"0.003889"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"491.28467"	"1471.83945"	"1471.83833"	"0.76"	"0.00037"	"9/66"	"9"	"66"	"7881857.89477539"	"HCD"	"MS2"	"12.14829"	"213.3"	"100.000"	"58.2385"	"18185"	"18185"	"18155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.6"	""	"235.9"	""	"279.9"	""	"406.9"	"3.1"	"438.9"	"429.3"	""	"789"	"36"	"35.000"	"28.000"	"0.00893402179345461"	"16"	"0.0001889"	"0.00088"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"736.42340"	"1471.83953"	"1471.83833"	"0.81"	"0.00060"	"6/66"	"6"	"66"	"125037.964416504"	"HCD"	"MS2"	"11.45674"	"8.7"	"100.000"	"103.8487"	"35017"	"35017"	"35014"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"10.2"	""	"6.8"	""	"18.2"	""	"16.1"	"22.0"	""	"789"	"33"	"35.000"	"28.000"	"0.0181153616064144"	"21"	"0.0003839"	"0.002011"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42340"	"1471.83953"	"1471.83833"	"0.81"	"0.00060"	"5/66"	"5"	"66"	"136455.48614502"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"104.8782"	"35214"	"35214"	"35212"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.6"	""	"7.4"	""	"15.1"	""	"19.0"	""	"17.3"	"18.7"	""	"789"	"19"	"35.000"	"28.000"	"0.54707517448996"	"14"	"0.0006737"	"0.006492"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42340"	"1471.83953"	"1471.83833"	"0.81"	"0.00060"	"9/66"	"9"	"66"	"129282.836975098"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"115.5986"	"37004"	"37004"	"37002"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.7"	""	"6.8"	""	"8.2"	""	"17.6"	""	"19.5"	"20.7"	""	"789"	"25"	"35.000"	"28.000"	"0.135221891792575"	"14"	"0.0003839"	"0.001871"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42340"	"1471.83953"	"1471.83833"	"0.81"	"0.00060"	"7/66"	"7"	"66"	"166831.598632813"	"HCD"	"MS2"	"20.48481"	"13.1"	"100.000"	"97.5397"	"33480"	"33480"	"33476"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.1"	""	"14.7"	""	"15.2"	""	"31.9"	""	"22.5"	"25.8"	""	"789"	"47"	"35.000"	"28.000"	"0.000853192457610309"	"16"	"0"	"0.0001432"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"491.28470"	"1471.83954"	"1471.83833"	"0.82"	"0.00040"	"10/66"	"10"	"66"	"565521076.818359"	"HCD"	"MS2"	"3.923807"	"339.8"	"2.330"	"54.2060"	"16590"	"16590"	"16577"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.2"	""	"314.2"	""	"373.5"	""	"716.1"	"0.2"	"748.8"	"749.2"	""	"789"	"45"	"35.000"	"28.000"	"0.0012360812182425"	"19"	"0.001217"	"0.0169"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42346"	"1471.83965"	"1471.83833"	"0.90"	"0.00066"	"5/66"	"5"	"66"	"176593.493652344"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"112.7688"	"36545"	"36545"	"36542"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	""	"5.0"	""	"9.2"	""	"16.6"	""	"17.7"	"15.1"	""	"789"	"23"	"35.000"	"28.000"	"0.183251276075375"	"14"	"0.0003839"	"0.002016"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"736.42346"	"1471.83965"	"1471.83833"	"0.90"	"0.00066"	"7/66"	"7"	"66"	"748727.97064209"	"HCD"	"MS2"	"0"	"60.0"	"100.000"	"68.7949"	"22535"	"22535"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.5"	""	"66.1"	""	"58.1"	""	"123.0"	""	"134.4"	"129.5"	""	"789"	"42"	"35.000"	"28.000"	"0.00242129111037511"	"22"	"0.0001308"	"0.0002536"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"736.42346"	"1471.83965"	"1471.83833"	"0.90"	"0.00066"	"9/66"	"9"	"66"	"1831379.4465332"	"HCD"	"MS2"	"34.65883"	"160.5"	"100.000"	"61.9274"	"19740"	"19740"	"19715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"185.4"	""	"178.2"	""	"187.7"	""	"290.4"	"6.3"	"334.5"	"342.5"	""	"789"	"39"	"35.000"	"28.000"	"0.00542059559142437"	"22"	"0.0001889"	"0.000594"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"736.42346"	"1471.83965"	"1471.83833"	"0.90"	"0.00066"	"7/66"	"7"	"66"	"1012304117.60156"	"HCD"	"MS2"	"0"	"484.4"	"0.727"	"53.9562"	"16435"	"16435"	"16425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"453.7"	""	"445.7"	""	"561.7"	""	"1006.6"	"2.2"	"1066.9"	"1071.6"	""	"789"	"45"	"35.000"	"28.000"	"0.00111441515010425"	"21"	"0.001058"	"0.01357"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"736.42352"	"1471.83977"	"1471.83833"	"0.98"	"0.00072"	"7/66"	"7"	"66"	"8655829.1126709"	"HCD"	"MS2"	"17.74005"	"532.0"	"84.525"	"55.5090"	"17069"	"17069"	"17051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"605.1"	""	"591.6"	""	"675.5"	""	"971.4"	"11.5"	"1048.2"	"1148.9"	""	"789"	"37"	"35.000"	"28.000"	"0.00781712411680111"	"16"	"0.0001889"	"0.000558"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"736.42358"	"1471.83989"	"1471.83833"	"1.06"	"0.00078"	"11/66"	"11"	"66"	"162391.62713623"	"HCD"	"MS2"	"10.20091"	"14.6"	"100.000"	"93.7062"	"32291"	"32291"	"32286"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.5"	""	"15.4"	""	"20.7"	""	"28.1"	""	"31.0"	"27.0"	""	"789"	"40"	"35.000"	"28.000"	"0.00438578166412588"	"24"	"0.0001859"	"0.0003434"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42358"	"1471.83989"	"1471.83833"	"1.06"	"0.00078"	"10/66"	"10"	"66"	"108627.862609863"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"104.1017"	"35066"	"35066"	"35064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.6"	""	"6.2"	""	"8.3"	""	"15.9"	""	"15.5"	"16.1"	""	"789"	"31"	"35.000"	"28.000"	"0.0333462504415734"	"14"	"0.0001889"	"0.000417"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"736.42358"	"1471.83989"	"1471.83833"	"1.06"	"0.00078"	"10/66"	"10"	"66"	"143921.686767578"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"100.7719"	"34342"	"34342"	"34340"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.5"	""	"10.8"	""	"13.1"	""	"23.4"	""	"27.1"	"23.8"	""	"789"	"40"	"35.000"	"28.000"	"0.00370720846017749"	"22"	"0.0001889"	"0.00105"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"736.42358"	"1471.83989"	"1471.83833"	"1.06"	"0.00078"	"8/66"	"8"	"66"	"723788.771789551"	"HCD"	"MS2"	"15.0111"	"63.7"	"100.000"	"68.6486"	"22424"	"22424"	"22394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.4"	""	"74.1"	""	"72.3"	""	"123.2"	""	"140.0"	"139.3"	""	"789"	"54"	"35.000"	"28.000"	"0.000148952229320077"	"18"	"0"	"0.0001662"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"736.42358"	"1471.83989"	"1471.83833"	"1.06"	"0.00078"	"7/66"	"7"	"66"	"1451147493.625"	"HCD"	"MS2"	"0"	"717.4"	"0.788"	"53.8487"	"16447"	"16447"	"16439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"698.9"	""	"656.4"	""	"820.1"	""	"1518.6"	"4.4"	"1523.3"	"1600.4"	""	"789"	"42"	"35.000"	"28.000"	"0.00262450260121587"	"17"	"0.001058"	"0.01418"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42365"	"1471.84001"	"1471.83833"	"1.14"	"0.00084"	"9/66"	"9"	"66"	"114167.045898438"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"114.3120"	"36792"	"36792"	"36790"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.0"	""	"4.9"	""	"6.7"	""	"19.3"	""	"15.3"	"16.1"	""	"787"	"21"	"35.000"	"28.000"	"0.311132040117931"	"14"	"0.0003839"	"0.001993"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"736.42371"	"1471.84014"	"1471.83833"	"1.23"	"0.00090"	"11/66"	"11"	"66"	"316724.573059082"	"HCD"	"MS2"	"0"	"29.3"	"100.000"	"82.9521"	"28249"	"28249"	"28224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.5"	""	"33.4"	""	"42.1"	""	"54.2"	"0.2"	"59.9"	"65.0"	""	"779"	"39"	"35.000"	"28.000"	"0.0051464464951567"	"23"	"0.0001889"	"0.000714"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42377"	"1471.84026"	"1471.83833"	"1.31"	"0.00096"	"8/66"	"8"	"66"	"856892.573608398"	"HCD"	"MS2"	"13.90867"	"70.4"	"100.000"	"68.4468"	"22393"	"22393"	"22362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.7"	""	"79.5"	""	"79.3"	""	"131.3"	"2.6"	"152.8"	"153.1"	""	"779"	"32"	"35.000"	"28.000"	"0.0269468163172925"	"14"	"0.0001889"	"0.0005234"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"491.28497"	"1471.84037"	"1471.83833"	"1.38"	"0.00068"	"9/66"	"9"	"66"	"7067562.62347412"	"HCD"	"MS2"	"39.79837"	"237.5"	"100.000"	"55.8534"	"17264"	"17264"	"17237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"312.3"	""	"289.7"	""	"297.7"	""	"389.0"	""	"476.9"	"491.0"	""	"779"	"12"	"35.000"	"28.000"	"2.27775737774275"	"17"	"0.001966"	"0.03101"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42383"	"1471.84038"	"1471.83833"	"1.39"	"0.00103"	"8/66"	"8"	"66"	"304742.498474121"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"82.8546"	"28260"	"28260"	"28237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.2"	""	"27.5"	""	"27.2"	""	"47.1"	"1.0"	"49.9"	"52.3"	""	"779"	"35"	"35.000"	"28.000"	"0.011311168239139"	"15"	"0.0001308"	"0.000262"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42383"	"1471.84038"	"1471.83833"	"1.39"	"0.00103"	"6/66"	"6"	"66"	"1076711.47180176"	"HCD"	"MS2"	"24.67798"	"91.4"	"100.000"	"65.2013"	"21024"	"21024"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.3"	""	"109.6"	""	"113.4"	""	"178.6"	""	"184.4"	"195.0"	""	"779"	"30"	"35.000"	"28.000"	"0.035851510819786"	"15"	"0.0001889"	"0.0004304"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"736.42389"	"1471.84050"	"1471.83833"	"1.48"	"0.00109"	"10/66"	"10"	"66"	"387738.912231445"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"78.3201"	"26360"	"26360"	"26337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.3"	""	"32.3"	""	"47.9"	""	"61.5"	"0.3"	"67.1"	"67.9"	""	"779"	"31"	"35.000"	"28.000"	"0.0323226873946867"	"22"	"0.0001889"	"0.0006978"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"736.42389"	"1471.84050"	"1471.83833"	"1.48"	"0.00109"	"7/66"	"7"	"66"	"897896489.570313"	"HCD"	"MS2"	"0"	"641.9"	"1.126"	"54.1373"	"16562"	"16562"	"16555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"618.1"	""	"614.6"	""	"725.7"	""	"1339.1"	"8.6"	"1388.7"	"1410.1"	""	"779"	"46"	"35.000"	"28.000"	"0.00109271640198219"	"21"	"0.001007"	"0.01107"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42395"	"1471.84062"	"1471.83833"	"1.56"	"0.00115"	"11/66"	"11"	"66"	"274115.453308105"	"HCD"	"MS2"	"7.029475"	"23.9"	"100.000"	"84.7052"	"28964"	"28964"	"28939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.6"	""	"24.2"	""	"31.4"	""	"46.1"	""	"52.5"	"50.5"	""	"779"	"39"	"35.000"	"28.000"	"0.00459734887586348"	"15"	"0.0001889"	"0.0004096"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"736.42401"	"1471.84075"	"1471.83833"	"1.64"	"0.00121"	"7/66"	"7"	"66"	"1395038050.00781"	"HCD"	"MS2"	"0.02628988"	"536.1"	"0.565"	"53.6883"	"16329"	"16329"	"16318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"521.4"	""	"501.4"	""	"610.9"	""	"1125.8"	"14.5"	"1158.2"	"1166.1"	""	"779"	"44"	"35.000"	"28.000"	"0.00170807706783357"	"21"	"0.001587"	"0.02147"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"736.42413"	"1471.84099"	"1471.83833"	"1.81"	"0.00133"	"8/66"	"8"	"66"	"240075786.970703"	"HCD"	"MS2"	"0"	"507.0"	"3.250"	"54.5777"	"16742"	"16742"	"16725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"478.0"	""	"485.0"	""	"571.3"	""	"1050.9"	""	"1112.4"	"1127.1"	""	"750"	"39"	"35.000"	"28.000"	"0.00439573262080549"	"16"	"0.0006037"	"0.004012"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"491.28522"	"1471.84110"	"1471.83833"	"1.88"	"0.00092"	"9/66"	"9"	"66"	"302935711.657227"	"HCD"	"MS2"	"4.607538"	"401.3"	"5.284"	"54.2497"	"16555"	"16555"	"16541"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.9"	""	"379.8"	""	"482.3"	""	"804.3"	""	"895.3"	"890.2"	""	"750"	"37"	"35.000"	"28.000"	"0.00699892384063001"	"16"	"0.00109"	"0.01475"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.42432"	"1471.84136"	"1471.83833"	"2.06"	"0.00151"	"5/66"	"5"	"66"	"476108.462280273"	"HCD"	"MS2"	"37.53033"	"41.6"	"100.000"	"77.5212"	"26034"	"26034"	"26009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.1"	""	"46.5"	""	"59.3"	""	"79.1"	""	"80.9"	"90.0"	""	"755"	"17"	"35.000"	"28.000"	"0.822085439063317"	"14"	"0.0003839"	"0.001804"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"736.42438"	"1471.84148"	"1471.83833"	"2.14"	"0.00157"	"7/66"	"7"	"66"	"25871044.5489502"	"HCD"	"MS2"	"5.475886"	"834.7"	"49.157"	"56.1456"	"17383"	"17383"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"239.3"	""	"249.6"	""	"632.6"	""	"724.9"	""	"4642.0"	"1645.8"	""	"755"	"43"	"35.000"	"28.000"	"0.00175354516396588"	"20"	"0.0002277"	"0.001247"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"736.42480"	"1471.84233"	"1471.83833"	"2.72"	"0.00200"	"5/66"	"5"	"66"	"113143.886962891"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"109.4485"	"36004"	"36004"	"36001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.0"	""	"6.2"	""	"12.2"	""	"12.9"	""	"21.6"	"18.7"	""	"744"	"28"	"35.000"	"28.000"	"0.0633202965122921"	"16"	"0.0006037"	"0.004607"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"491.28592"	"1471.84320"	"1471.83833"	"3.31"	"0.00163"	"9/66"	"9"	"66"	"226239676.414063"	"HCD"	"MS2"	"7.372693"	"388.3"	"6.623"	"54.5386"	"16726"	"16726"	"16709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"381.9"	""	"410.5"	""	"465.6"	""	"766.0"	"4.0"	"832.6"	"830.8"	""	"750"	"35"	"35.000"	"28.000"	"0.0120512270199012"	"15"	"0.0006037"	"0.005764"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASLMTYK"	"[K].aLASLmTYk.[C]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"736.43231"	"1471.85735"	"1471.85946"	"-1.43"	"-0.00106"	"13/70"	"13"	"70"	"2607267.8571167"	"HCD"	"MS2"	"0"	"189.8"	"100.000"	"43.5248"	"12205"	"12205"	"12186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.9"	""	"210.9"	""	"238.7"	""	"514.2"	"2.6"	"316.7"	"334.1"	""	"725"	"41"	"35.000"	"28.000"	"0.00305005738846383"	"17"	"0.0002723"	"0.001377"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASLMTYK"	"[K].aLASLmTYk.[C]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.43274"	"1471.85820"	"1471.85946"	"-0.85"	"-0.00063"	"8/70"	"8"	"70"	"2928951.1307373"	"HCD"	"MS2"	"0"	"206.9"	"100.000"	"43.8093"	"12370"	"12370"	"12348"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.7"	""	"221.7"	""	"257.5"	""	"527.1"	"1.3"	"393.2"	"355.6"	""	"729"	"22"	"35.000"	"28.000"	"0.22320171778368"	"14"	"0.00274"	"0.04348"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASLMTYK"	"[K].aLASLmTYk.[C]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.43304"	"1471.85881"	"1471.85946"	"-0.44"	"-0.00032"	"8/70"	"8"	"70"	"3311858.48498535"	"HCD"	"MS2"	"0"	"212.6"	"100.000"	"44.1210"	"12497"	"12497"	"12476"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.7"	"3.0"	"228.8"	""	"242.7"	""	"552.2"	""	"413.3"	"390.9"	""	"721"	"32"	"35.000"	"28.000"	"0.0227984472421127"	"14"	"0.0006737"	"0.00654"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTIALALGVER"	"[K].lSTIALALGVER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"0"	"3"	"3"	"0.4561"	"0.0000"	"1"	"1"	"1"	"491.30542"	"1471.90171"	"1471.90454"	"-1.93"	"-0.00095"	"12/106"	"12"	"106"	"2769171.80322266"	"HCD"	"MS2"	"27.82245"	"29.1"	"100.000"	"70.6787"	"23304"	"23304"	"23274"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.2"	""	"36.0"	""	"40.6"	""	"53.4"	"0.3"	"53.0"	"57.5"	""	"521"	"57"	"34.000"	"27.000"	"5.54380221478497E-05"	""	"0"	"5.914E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTIALALGVER"	"[K].lSTIALALGVER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"0"	"2"	"2"	"0.7581"	"0.0000"	"1"	"1"	"1"	"736.45502"	"1471.90276"	"1471.90454"	"-1.21"	"-0.00089"	"11/106"	"11"	"106"	"2239695.81262207"	"HCD"	"MS2"	"39.44263"	"114.6"	"100.000"	"70.6987"	"23260"	"23260"	"23235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.6"	""	"139.5"	""	"150.8"	""	"209.1"	""	"216.6"	"224.7"	""	"512"	"62"	"34.000"	"27.000"	"1.56041445693483E-05"	""	"0"	"8.45E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTIALALGVER"	"[K].lSTIALALGVER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"0"	"3"	"3"	"0.4909"	"0.0000"	"1"	"1"	"1"	"491.30597"	"1471.90335"	"1471.90454"	"-0.81"	"-0.00040"	"14/106"	"14"	"106"	"2551820.6229248"	"HCD"	"MS2"	"17.36823"	"28.5"	"100.000"	"70.7378"	"23276"	"23276"	"23251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.8"	""	"41.6"	""	"37.2"	""	"60.0"	""	"51.6"	"54.0"	""	"512"	"55"	"34.000"	"27.000"	"8.81535822754146E-05"	""	"0"	"5.558E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTIALALGVER"	"[K].lSTIALALGVER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"736.45581"	"1471.90434"	"1471.90454"	"-0.14"	"-0.00010"	"11/106"	"11"	"106"	"2390546.80889893"	"HCD"	"MS2"	"43.35845"	"118.8"	"100.000"	"70.6281"	"23283"	"23283"	"23258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.6"	""	"135.3"	""	"159.4"	""	"221.0"	""	"224.5"	"235.1"	""	"501"	"64"	"33.000"	"26.000"	"1.0612256299541E-05"	""	"0"	"9.776E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPTLDLDK"	"[R].lVPTLDLDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"736.45978"	"1471.91228"	"1471.91360"	"-0.90"	"-0.00066"	"8/72"	"8"	"72"	"3064937.05029297"	"HCD"	"MS2"	"33.78608"	"219.8"	"100.000"	"59.5677"	"18723"	"18723"	"18697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.4"	""	"250.3"	""	"286.9"	""	"395.1"	"2.5"	"408.7"	"465.7"	""	"444"	"15"	"33.000"	"26.000"	"0.634385100629239"	"18"	"0.001783"	"0.02465"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQILNLEVK"	"[K].gQILNLEVk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"491.31287"	"1471.92405"	"1471.92484"	"-0.54"	"-0.00026"	"9/78"	"9"	"78"	"4401853.86956787"	"HCD"	"MS2"	"29.55575"	"149.1"	"100.000"	"49.2408"	"14537"	"14537"	"14511"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.1"	""	"187.2"	""	"212.7"	""	"246.1"	"0.5"	"266.9"	"294.3"	""	"375"	"28"	"32.000"	"25.000"	"0.0326588788760928"	"24"	"0.0001308"	"0.000291"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGDNILAVLK"	"[R].aGDNILAVLk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"736.46588"	"1471.92449"	"1471.92484"	"-0.24"	"-0.00017"	"8/84"	"8"	"84"	"2597019.76397705"	"HCD"	"MS2"	"47.33079"	"213.0"	"100.000"	"61.7173"	"19654"	"19654"	"19635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"245.4"	""	"229.7"	""	"242.0"	""	"405.4"	""	"437.3"	"464.4"	""	"369"	"34"	"32.000"	"25.000"	"0.00748163247902268"	"17"	"0.0001308"	"0.0002173"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGDNILAVLK"	"[R].aGDNILAVLk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"736.46600"	"1471.92473"	"1471.92484"	"-0.07"	"-0.00005"	"8/84"	"8"	"84"	"2481033.42993164"	"HCD"	"MS2"	"46.09687"	"200.7"	"100.000"	"61.5956"	"19551"	"19551"	"19529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.5"	""	"223.7"	""	"234.9"	""	"359.9"	"0.4"	"413.0"	"453.2"	""	"369"	"34"	"32.000"	"25.000"	"0.00749887942309818"	"19"	"7.476E-05"	"0.0001964"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAAAAGAK"	"[K].kPAAAAGAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"491.32306"	"1471.95462"	"1471.95636"	"-1.18"	"-0.00058"	"6/82"	"6"	"82"	"2796699.96136475"	"HCD"	"MS2"	"14.40648"	"187.4"	"100.000"	"25.6145"	"4949"	"4949"	"4923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.7"	""	"293.5"	""	"355.2"	""	"257.8"	"1.5"	"349.8"	"232.7"	""	"252"	"28"	"31.000"	"24.000"	"0.0190270099424683"	"21"	"0"	"3.475E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAAAAGAK"	"[K].kPAAAAGAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"491.32312"	"1471.95481"	"1471.95636"	"-1.05"	"-0.00052"	"11/82"	"11"	"82"	"51904804.8067627"	"HCD"	"MS2"	"9.117087"	"1123.9"	"40.064"	"25.4069"	"4900"	"4900"	"4883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1667.3"	""	"1976.8"	""	"2378.5"	""	"1440.5"	""	"1989.5"	"1157.0"	""	"252"	"27"	"31.000"	"24.000"	"0.0238435295949267"	"17"	"0"	"0.0001135"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAAAAGAK"	"[K].kPAAAAGAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"736.48132"	"1471.95537"	"1471.95636"	"-0.67"	"-0.00049"	"5/82"	"5"	"82"	"1191722.93328857"	"HCD"	"MS2"	"0"	"76.8"	"100.000"	"25.3978"	"4897"	"4897"	"4871"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.2"	""	"146.6"	""	"165.3"	""	"97.8"	""	"135.9"	"79.0"	""	"252"	"27"	"31.000"	"24.000"	"0.025256347544801"	""	"0"	"0.0001019"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAAAAGAK"	"[K].kPAAAAGAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"491.32336"	"1471.95554"	"1471.95636"	"-0.56"	"-0.00027"	"11/82"	"11"	"82"	"51597861.0046387"	"HCD"	"MS2"	"11.47885"	"987.4"	"35.836"	"25.3096"	"4826"	"4826"	"4813"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1480.2"	""	"1732.5"	""	"2107.7"	""	"1288.4"	"3.2"	"1714.1"	"991.3"	""	"252"	"28"	"31.000"	"24.000"	"0.0191588988746295"	"18"	"0"	"7.488E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAAAAGAK"	"[K].kPAAAAGAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"736.48193"	"1471.95659"	"1471.95636"	"0.16"	"0.00012"	"7/82"	"7"	"82"	"1136575.19012451"	"HCD"	"MS2"	"0"	"72.4"	"100.000"	"25.3346"	"4836"	"4836"	"4813"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.0"	""	"135.1"	""	"152.2"	""	"91.9"	""	"121.8"	"78.4"	""	"250"	"28"	"30.000"	"23.000"	"0.0213751914386286"	""	"0.0001889"	"0.0005918"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVYNSWMK"	"[K].aVYNSWmk.[D]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"736.90210"	"1472.79692"	"1472.79719"	"-0.18"	"-0.00013"	"12/64"	"12"	"64"	"1268270.29510498"	"HCD"	"MS2"	"0"	"98.3"	"100.000"	"38.6227"	"10256"	"10256"	"10225"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.0"	""	"115.0"	""	"126.8"	""	"192.4"	""	"185.5"	"162.2"	""	"783"	"17"	"35.000"	"28.000"	"0.782945921961219"	"15"	"0.003635"	"0.08356"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVYNSWMK"	"[K].aVYNSWmk.[D]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"736.90247"	"1472.79766"	"1472.79719"	"0.31"	"0.00023"	"7/64"	"7"	"64"	"1210435.11651611"	"HCD"	"MS2"	"0"	"103.0"	"100.000"	"38.5459"	"10181"	"10181"	"10151"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.2"	""	"135.5"	""	"129.0"	""	"195.5"	""	"191.7"	"177.2"	""	"838"	"15"	"36.000"	"29.000"	"1.37155751154233"	"15"	"0.006471"	"0.2346"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90594"	"1472.80461"	"1472.80709"	"-1.68"	"-0.00124"	"7/62"	"7"	"62"	"5327492.31634521"	"HCD"	"MS2"	"54.03024"	"398.7"	"100.000"	"58.6672"	"18410"	"18410"	"18389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"488.1"	""	"471.0"	""	"523.7"	""	"642.9"	"2.2"	"813.9"	"843.7"	""	"816"	"17"	"36.000"	"29.000"	"0.860320285172782"	"14"	"0.00955"	"0.4301"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90625"	"1472.80522"	"1472.80709"	"-1.27"	"-0.00093"	"11/62"	"11"	"62"	"3095667.93115234"	"HCD"	"MS2"	"34.2956"	"227.3"	"100.000"	"59.6139"	"18795"	"18795"	"18773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.7"	""	"309.3"	""	"327.7"	""	"321.7"	""	"435.6"	"478.7"	""	"811"	"11"	"36.000"	"29.000"	"3.22100099180696"	"13"	"0.00803"	"0.3283"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.60660"	"1472.80524"	"1472.80709"	"-1.25"	"-0.00062"	"6/62"	"6"	"62"	"3526049.9588623"	"HCD"	"MS2"	"41.08501"	"112.4"	"100.000"	"57.7377"	"18034"	"18034"	"18005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.4"	""	"154.1"	""	"145.8"	""	"169.9"	""	"233.0"	"224.8"	""	"811"	"13"	"36.000"	"29.000"	"1.87064276484234"	"13"	"0.005946"	"0.1988"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"491.60663"	"1472.80533"	"1472.80709"	"-1.19"	"-0.00059"	"6/62"	"6"	"62"	"5018730.60015869"	"HCD"	"MS2"	"16.70707"	"153.4"	"100.000"	"52.7561"	"15965"	"15965"	"15938"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.0"	""	"209.7"	""	"202.9"	""	"243.5"	""	"290.6"	"312.6"	""	"811"	"26"	"36.000"	"29.000"	"0.101155816177537"	"21"	"0.0003839"	"0.001676"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"491.60672"	"1472.80561"	"1472.80709"	"-1.01"	"-0.00049"	"6/62"	"6"	"62"	"20790976.8648071"	"HCD"	"MS2"	"9.019656"	"454.0"	"91.478"	"52.1190"	"15704"	"15704"	"15682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"442.2"	""	"422.3"	""	"438.2"	""	"1275.1"	""	"846.9"	"885.6"	""	"811"	"34"	"36.000"	"29.000"	"0.017218323318023"	"24"	"0.0006037"	"0.003681"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"491.60687"	"1472.80606"	"1472.80709"	"-0.70"	"-0.00034"	"5/62"	"5"	"62"	"2914129.42913818"	"HCD"	"MS2"	"50.60966"	"93.9"	"100.000"	"58.9266"	"18516"	"18516"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.3"	""	"113.4"	""	"117.2"	""	"159.9"	"0.3"	"189.2"	"199.2"	""	"811"	"13"	"36.000"	"29.000"	"2.12809425131283"	"16"	"0.0004166"	"0.002519"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90674"	"1472.80620"	"1472.80709"	"-0.60"	"-0.00044"	"7/62"	"7"	"62"	"3966592.00524902"	"HCD"	"MS2"	"40.78178"	"302.7"	"100.000"	"58.9851"	"18539"	"18539"	"18517"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.2"	""	"365.7"	""	"403.1"	""	"458.2"	""	"623.7"	"637.7"	""	"805"	"20"	"36.000"	"29.000"	"0.359555457202652"	"14"	"0.004977"	"0.149"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.60693"	"1472.80625"	"1472.80709"	"-0.57"	"-0.00028"	"5/62"	"5"	"62"	"5031995.31298828"	"HCD"	"MS2"	"55.44209"	"153.5"	"100.000"	"56.7124"	"17615"	"17615"	"17589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.1"	""	"180.9"	""	"201.4"	""	"231.3"	""	"328.1"	"328.3"	""	"805"	"11"	"36.000"	"29.000"	"2.92931371326072"	"13"	"0.0008125"	"0.007531"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"491.60693"	"1472.80625"	"1472.80709"	"-0.57"	"-0.00028"	"6/62"	"6"	"62"	"51023888.6789551"	"HCD"	"MS2"	"5.457136"	"260.9"	"21.448"	"52.5838"	"15944"	"15944"	"15926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.8"	""	"226.3"	""	"242.2"	""	"763.9"	""	"492.7"	"524.2"	""	"805"	"30"	"36.000"	"29.000"	"0.036539776339672"	"22"	"0.0006037"	"0.00611"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"491.60693"	"1472.80625"	"1472.80709"	"-0.57"	"-0.00028"	"7/62"	"7"	"62"	"15904791.0123901"	"HCD"	"MS2"	"13.8944"	"387.4"	"100.000"	"52.2894"	"15824"	"15824"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"386.9"	""	"355.1"	""	"367.1"	""	"1092.2"	""	"737.6"	"739.2"	""	"805"	"39"	"36.000"	"29.000"	"0.00540462896857991"	"22"	"0.000523"	"0.002992"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"491.60703"	"1472.80652"	"1472.80709"	"-0.38"	"-0.00019"	"6/62"	"6"	"62"	"5259554.22515869"	"HCD"	"MS2"	"15.76999"	"153.1"	"100.000"	"52.9155"	"16080"	"16080"	"16054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.2"	""	"200.4"	""	"198.0"	""	"265.6"	""	"282.3"	"314.1"	""	"803"	"30"	"36.000"	"29.000"	"0.0439223481058246"	"22"	"0.0006037"	"0.004611"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90692"	"1472.80657"	"1472.80709"	"-0.35"	"-0.00026"	"14/62"	"14"	"62"	"8270007.68896484"	"HCD"	"MS2"	"0.8850993"	"541.6"	"100.000"	"52.8534"	"16055"	"16055"	"16038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"671.5"	""	"626.2"	""	"621.5"	""	"1103.5"	""	"987.4"	"1128.3"	""	"803"	"43"	"36.000"	"29.000"	"0.0019709951227527"	"15"	"0.0001889"	"0.0007992"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90698"	"1472.80669"	"1472.80709"	"-0.27"	"-0.00020"	"7/62"	"7"	"62"	"3863297.21417236"	"HCD"	"MS2"	"35.4427"	"292.4"	"100.000"	"58.8524"	"18432"	"18432"	"18409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"367.4"	""	"364.9"	""	"380.9"	""	"439.6"	""	"616.4"	"614.2"	""	"809"	"25"	"36.000"	"29.000"	"0.1261590836766"	"14"	"0.002981"	"0.0553"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90704"	"1472.80681"	"1472.80709"	"-0.19"	"-0.00014"	"7/62"	"7"	"62"	"7607660.13977051"	"HCD"	"MS2"	"40.68483"	"532.8"	"100.000"	"56.6596"	"17593"	"17593"	"17573"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"617.5"	""	"668.8"	""	"699.3"	""	"783.8"	""	"1205.6"	"1089.5"	""	"809"	"19"	"36.000"	"29.000"	"0.470888978896543"	"14"	"0.0003839"	"0.002021"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"491.60712"	"1472.80680"	"1472.80709"	"-0.20"	"-0.00010"	"4/62"	"4"	"62"	"4431192.92352295"	"HCD"	"MS2"	"64.24813"	"141.3"	"100.000"	"57.5711"	"17912"	"17912"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.2"	""	"184.6"	""	"169.0"	""	"232.0"	""	"296.1"	"304.0"	""	"809"	"15"	"36.000"	"29.000"	"1.42534017336686"	"16"	"0.00103"	"0.01224"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"491.60712"	"1472.80680"	"1472.80709"	"-0.20"	"-0.00010"	"6/62"	"6"	"62"	"36120716.5150146"	"HCD"	"MS2"	"3.576497"	"314.6"	"36.483"	"52.4180"	"15827"	"15827"	"15810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.7"	""	"293.0"	""	"276.2"	""	"883.8"	""	"605.3"	"647.5"	""	"809"	"31"	"36.000"	"29.000"	"0.0287685866272771"	"21"	"0.0006037"	"0.00412"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"491.60715"	"1472.80689"	"1472.80709"	"-0.14"	"-0.00007"	"4/62"	"4"	"62"	"4536383.9475708"	"HCD"	"MS2"	"62.53075"	"126.1"	"100.000"	"57.3851"	"17890"	"17890"	"17861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.1"	""	"149.2"	""	"168.7"	""	"197.7"	""	"251.7"	"272.3"	""	"809"	"15"	"36.000"	"29.000"	"1.25002450245175"	"17"	"0.0006737"	"0.006588"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90717"	"1472.80705"	"1472.80709"	"-0.02"	"-0.00002"	"14/62"	"14"	"62"	"9364813.61395264"	"HCD"	"MS2"	"20.48907"	"612.5"	"100.000"	"52.0430"	"15673"	"15673"	"15650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"639.7"	""	"584.1"	""	"567.6"	""	"1669.4"	"0.8"	"1168.0"	"1185.0"	""	"805"	"43"	"36.000"	"29.000"	"0.0020312617226932"	"15"	"0.0002277"	"0.001157"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"491.60721"	"1472.80707"	"1472.80709"	"-0.01"	"-0.00001"	"5/62"	"5"	"62"	"5189869.76495361"	"HCD"	"MS2"	"57.3315"	"159.6"	"100.000"	"56.6617"	"17540"	"17540"	"17515"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"201.9"	""	"199.8"	""	"217.4"	""	"259.0"	""	"319.9"	"319.7"	""	"805"	"15"	"36.000"	"29.000"	"1.42483929786083"	"16"	"0.0009404"	"0.01007"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"736.90741"	"1472.80754"	"1472.80709"	"0.31"	"0.00023"	"7/62"	"7"	"62"	"6791983.77697754"	"HCD"	"MS2"	"44.74285"	"466.0"	"100.000"	"56.8525"	"17618"	"17618"	"17595"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"569.7"	""	"581.4"	""	"600.6"	""	"723.3"	"0.2"	"968.8"	"981.5"	""	"808"	"18"	"36.000"	"29.000"	"0.684512471380721"	"16"	"0.00103"	"0.01161"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90753"	"1472.80779"	"1472.80709"	"0.47"	"0.00035"	"7/62"	"7"	"62"	"6151410.14648438"	"HCD"	"MS2"	"29.25497"	"446.2"	"100.000"	"57.2814"	"17847"	"17847"	"17829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"568.5"	""	"560.3"	""	"563.0"	""	"658.3"	"0.1"	"907.4"	"979.0"	""	"808"	"27"	"36.000"	"29.000"	"0.0844075636865032"	"14"	"0.0008453"	"0.008335"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90753"	"1472.80779"	"1472.80709"	"0.47"	"0.00035"	"7/62"	"7"	"62"	"5947391.85516357"	"HCD"	"MS2"	"36.38563"	"427.2"	"100.000"	"57.5479"	"17902"	"17902"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"565.5"	""	"535.6"	""	"570.1"	""	"642.5"	""	"861.2"	"880.1"	""	"808"	"28"	"36.000"	"29.000"	"0.0631511647626946"	"14"	"0.0008125"	"0.007639"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"736.90765"	"1472.80803"	"1472.80709"	"0.64"	"0.00047"	"7/62"	"7"	"62"	"7420065.38891602"	"HCD"	"MS2"	"40.54551"	"527.7"	"100.000"	"56.9750"	"17722"	"17722"	"17701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"676.0"	""	"635.2"	""	"704.0"	""	"806.4"	""	"1083.1"	"1107.5"	""	"808"	"17"	"36.000"	"29.000"	"0.809806699055525"	"15"	"0.003286"	"0.068"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90771"	"1472.80815"	"1472.80709"	"0.72"	"0.00053"	"7/62"	"7"	"62"	"4205738.89013672"	"HCD"	"MS2"	"49.65205"	"303.7"	"100.000"	"59.1730"	"18562"	"18562"	"18537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"403.7"	""	"391.3"	""	"402.9"	""	"450.5"	""	"595.5"	"644.8"	""	"808"	"25"	"36.000"	"29.000"	"0.129235362431533"	"14"	"0.004726"	"0.1374"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90778"	"1472.80828"	"1472.80709"	"0.81"	"0.00059"	"14/62"	"14"	"62"	"7688992.22094727"	"HCD"	"MS2"	"0.6284192"	"478.0"	"100.000"	"52.6594"	"15925"	"15925"	"15906"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"554.7"	""	"517.2"	""	"549.9"	""	"1007.0"	""	"933.7"	"977.8"	""	"806"	"43"	"36.000"	"29.000"	"0.00194672697222029"	"15"	"0.0001889"	"0.0009646"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90790"	"1472.80852"	"1472.80709"	"0.97"	"0.00072"	"7/62"	"7"	"62"	"5623894.74249268"	"HCD"	"MS2"	"31.89295"	"370.2"	"100.000"	"57.1631"	"17745"	"17745"	"17723"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"450.9"	""	"476.6"	""	"474.0"	""	"545.2"	""	"765.8"	"808.5"	""	"806"	"27"	"36.000"	"29.000"	"0.0836190147534329"	"14"	"0.001846"	"0.02579"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90796"	"1472.80864"	"1472.80709"	"1.05"	"0.00078"	"10/62"	"10"	"62"	"6940469.65759277"	"HCD"	"MS2"	"40.31331"	"461.5"	"100.000"	"56.5349"	"17488"	"17488"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"568.4"	""	"555.1"	""	"622.4"	""	"700.1"	""	"975.4"	"967.1"	""	"806"	"22"	"36.000"	"29.000"	"0.250210220794716"	"14"	"0.00103"	"0.01281"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90796"	"1472.80864"	"1472.80709"	"1.05"	"0.00078"	"14/62"	"14"	"62"	"10240496.6335449"	"HCD"	"MS2"	"11.67337"	"637.2"	"100.000"	"52.2410"	"15804"	"15804"	"15782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"671.1"	""	"630.9"	""	"592.7"	""	"1732.7"	"0.8"	"1215.7"	"1204.6"	""	"806"	"43"	"36.000"	"29.000"	"0.00201978455151791"	"15"	"0.0001889"	"0.0008864"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90802"	"1472.80876"	"1472.80709"	"1.14"	"0.00084"	"7/62"	"7"	"62"	"6579345.87451172"	"HCD"	"MS2"	"33.30501"	"466.6"	"100.000"	"57.6020"	"17978"	"17978"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"580.0"	""	"600.0"	""	"655.5"	""	"661.0"	""	"978.7"	"959.3"	""	"812"	"27"	"36.000"	"29.000"	"0.0886188344208259"	"14"	"0.003286"	"0.06902"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90808"	"1472.80889"	"1472.80709"	"1.22"	"0.00090"	"7/62"	"7"	"62"	"118606562.011719"	"HCD"	"MS2"	"0"	"592.5"	"8.138"	"52.3399"	"15795"	"15795"	"15778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"563.4"	""	"495.6"	""	"527.3"	""	"1755.9"	"8.5"	"1081.5"	"1194.2"	""	"826"	"39"	"36.000"	"29.000"	"0.00550744351483453"	"15"	"0.0008731"	"0.008482"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].dLTDYLmk.[I]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.90839"	"1472.80950"	"1472.80709"	"1.63"	"0.00120"	"14/62"	"14"	"62"	"116145805.951172"	"HCD"	"MS2"	"0"	"670.3"	"9.801"	"52.5405"	"15927"	"15927"	"15910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"644.2"	""	"590.0"	""	"575.8"	""	"1941.8"	"5.6"	"1266.6"	"1342.3"	""	"828"	"43"	"36.000"	"29.000"	"0.00195884621210053"	"16"	"0.001217"	"0.01636"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTYFASIAK"	"[R].nTYFASIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"736.92780"	"1472.84831"	"1472.85134"	"-2.05"	"-0.00151"	"13/88"	"13"	"88"	"3518986.28894043"	"HCD"	"MS2"	"0"	"289.6"	"100.000"	"43.2498"	"12093"	"12093"	"12076"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"420.1"	""	"396.0"	""	"413.8"	""	"463.9"	"1.3"	"518.9"	"529.0"	""	"780"	"40"	"35.000"	"28.000"	"0.00424682736400038"	"16"	"0.0001859"	"0.0003353"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTYFASIAK"	"[R].nTYFASIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"491.62100"	"1472.84845"	"1472.85134"	"-1.96"	"-0.00096"	"10/88"	"10"	"88"	"3664800.55987549"	"HCD"	"MS2"	"40.07195"	"138.3"	"100.000"	"43.2040"	"12075"	"12075"	"12058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.0"	""	"210.9"	""	"191.0"	""	"215.1"	""	"256.0"	"247.7"	""	"781"	"29"	"35.000"	"28.000"	"0.0524349717324336"	"20"	"0.0003839"	"0.001887"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTYFASIAK"	"[R].nTYFASIAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"736.92828"	"1472.84929"	"1472.85134"	"-1.39"	"-0.00102"	"13/88"	"13"	"88"	"4163151.83099365"	"HCD"	"MS2"	"0"	"323.9"	"100.000"	"43.4016"	"12204"	"12204"	"12192"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"514.8"	""	"492.2"	""	"466.4"	""	"495.9"	"3.0"	"532.2"	"558.7"	""	"810"	"40"	"36.000"	"29.000"	"0.00391250605990875"	"18"	"0.0001308"	"0.0002267"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGHTGPLYK"	"[R].aAGHTGPLYk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.62515"	"1472.86090"	"1472.86257"	"-1.13"	"-0.00056"	"7/72"	"7"	"72"	"8579550.19616699"	"HCD"	"MS2"	"18.06084"	"349.0"	"100.000"	"27.7764"	"5824"	"5824"	"5804"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"361.7"	""	"426.2"	""	"399.1"	""	"539.2"	""	"763.7"	"830.9"	""	"785"	"36"	"35.000"	"28.000"	"0.0102056262854237"	"15"	"0"	"6.68E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGHTGPLYK"	"[R].aAGHTGPLYk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"491.62518"	"1472.86100"	"1472.86257"	"-1.07"	"-0.00052"	"8/72"	"8"	"72"	"8738377.8873291"	"HCD"	"MS2"	"12.46826"	"371.4"	"100.000"	"27.8622"	"5894"	"5894"	"5873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"399.8"	""	"459.9"	""	"440.8"	""	"614.3"	""	"789.7"	"826.7"	""	"785"	"39"	"35.000"	"28.000"	"0.00518608536418231"	"23"	"0"	"4.289E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLQPSQQK"	"[R].sVLQPSQQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"736.94501"	"1472.88274"	"1472.88370"	"-0.65"	"-0.00048"	"4/84"	"4"	"84"	"127534.218505859"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"31.0637"	"7167"	"7167"	"7136"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.3"	""	"11.8"	""	"10.3"	""	"19.5"	""	"19.7"	"18.1"	""	"670"	"17"	"35.000"	"28.000"	"0.647209386200669"	"24"	"0.0006037"	"0.004267"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDDILNLK"	"[R].aLDDILNLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QY78"	"Inhibitor of nuclear factor kappa-B kinase subunit beta OS=Rattus norvegicus OX=10116 GN=Ikbkb PE=1 SV=1"	"Q9QY78"	"Inhibitor of nuclear factor kappa-B kinase subunit beta OS=Rattus norvegicus OX=10116 GN=Ikbkb PE=1 SV=1"	"0"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"736.95752"	"1472.90776"	"1472.90885"	"-0.74"	"-0.00054"	"14/70"	"14"	"70"	"1037994.74523926"	"HCD"	"MS2"	"44.76033"	"92.4"	"100.000"	"68.1538"	"22273"	"22273"	"22250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.7"	""	"103.5"	""	"126.1"	""	"164.5"	""	"199.4"	"190.2"	""	"553"	"25"	"34.000"	"27.000"	"0.0801115501999416"	""	"0"	"8.932E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDDILNLK"	"[R].aLDDILNLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QY78"	"Inhibitor of nuclear factor kappa-B kinase subunit beta OS=Rattus norvegicus OX=10116 GN=Ikbkb PE=1 SV=1"	"Q9QY78"	"Inhibitor of nuclear factor kappa-B kinase subunit beta OS=Rattus norvegicus OX=10116 GN=Ikbkb PE=1 SV=1"	"0"	"2"	"2"	"0.2812"	"0.0000"	"1"	"1"	"1"	"736.95837"	"1472.90947"	"1472.90885"	"0.42"	"0.00031"	"12/70"	"12"	"70"	"979648.242675781"	"HCD"	"MS2"	"41.97769"	"91.3"	"100.000"	"68.2498"	"22261"	"22261"	"22234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.0"	""	"111.3"	""	"118.4"	""	"170.1"	""	"189.9"	"183.4"	""	"531"	"32"	"34.000"	"27.000"	"0.0181997124123182"	""	"0"	"0.0001341"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQIAELTK"	"[R].lVQIAELTk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"736.97552"	"1472.94377"	"1472.94524"	"-0.99"	"-0.00073"	"13/80"	"13"	"80"	"10147096.0465088"	"HCD"	"MS2"	"38.60754"	"699.6"	"100.000"	"58.0891"	"18124"	"18124"	"18107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"932.5"	""	"924.4"	""	"971.1"	""	"1119.1"	""	"1323.8"	"1364.2"	""	"381"	"42"	"32.000"	"25.000"	"0.00127319516296821"	""	"0.0001889"	"0.0005459"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQIAELTK"	"[R].lVQIAELTk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"0"	"3"	"3"	"0.5185"	"0.0000"	"1"	"1"	"1"	"491.65292"	"1472.94422"	"1472.94524"	"-0.69"	"-0.00034"	"5/80"	"5"	"80"	"7882437.88970947"	"HCD"	"MS2"	"31.78237"	"223.3"	"100.000"	"58.1789"	"18160"	"18160"	"18139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.5"	""	"269.2"	""	"291.4"	""	"408.0"	""	"462.1"	"441.9"	""	"381"	"27"	"32.000"	"25.000"	"0.0388056515802939"	""	"0.0002277"	"0.001122"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQIAELTK"	"[R].lVQIAELTk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"0"	"3"	"3"	"0.3784"	"0.0000"	"1"	"1"	"1"	"491.65302"	"1472.94449"	"1472.94524"	"-0.51"	"-0.00025"	"7/80"	"7"	"80"	"8290163.32824707"	"HCD"	"MS2"	"46.72518"	"241.2"	"100.000"	"58.2878"	"18259"	"18259"	"18229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.9"	""	"326.0"	""	"333.4"	""	"404.4"	""	"455.7"	"465.1"	""	"373"	"37"	"32.000"	"25.000"	"0.00357831720135009"	""	"0.0001308"	"0.0002075"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQIAELTK"	"[R].lVQIAELTk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"736.97650"	"1472.94573"	"1472.94524"	"0.33"	"0.00024"	"8/80"	"8"	"80"	"10894827.7659302"	"HCD"	"MS2"	"40.48565"	"756.2"	"100.000"	"58.3340"	"18278"	"18278"	"18261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"910.2"	""	"921.8"	""	"1033.3"	""	"1281.1"	""	"1502.0"	"1536.6"	""	"371"	"37"	"32.000"	"25.000"	"0.00336778155444417"	"24"	"0.0001859"	"0.0003673"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTQALPK"	"[R].kTQALPk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"491.66309"	"1472.97470"	"1472.97676"	"-1.40"	"-0.00069"	"7/60"	"7"	"60"	"42066969.6369629"	"HCD"	"MS2"	"37.21207"	"830.2"	"30.948"	"28.2019"	"6034"	"6034"	"6017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1362.2"	""	"1202.0"	""	"1296.6"	""	"1267.8"	""	"1342.5"	"1377.1"	""	"182"	"5"	"29.000"	"22.000"	"2.81865156228709"	"14"	"0.001007"	"0.01094"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTQALPK"	"[R].kTQALPk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"1"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"736.99109"	"1472.97490"	"1472.97676"	"-1.26"	"-0.00093"	"5/60"	"5"	"60"	"2002458.99816895"	"HCD"	"MS2"	"0"	"148.1"	"100.000"	"28.2132"	"6038"	"6038"	"6017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.6"	""	"223.7"	""	"222.6"	""	"224.3"	""	"241.7"	"247.6"	""	"182"	"16"	"29.000"	"22.000"	"0.215795007215211"	"18"	"0.005293"	"0.1614"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTQALPK"	"[R].kTQALPk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"1"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"491.66324"	"1472.97516"	"1472.97676"	"-1.09"	"-0.00053"	"7/60"	"7"	"60"	"42232003.1708984"	"HCD"	"MS2"	"23.03804"	"778.8"	"28.355"	"28.1387"	"5973"	"5973"	"5964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1238.4"	""	"1168.1"	""	"1172.5"	""	"1140.9"	""	"1285.3"	"1361.0"	""	"182"	"5"	"29.000"	"22.000"	"2.57064077717329"	"16"	"0.0006037"	"0.00567"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTQALPK"	"[R].kTQALPk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"1"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"736.99158"	"1472.97588"	"1472.97676"	"-0.60"	"-0.00044"	"5/60"	"5"	"60"	"1945150.21789551"	"HCD"	"MS2"	"0"	"149.0"	"100.000"	"28.1523"	"5978"	"5978"	"5964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.4"	""	"214.8"	""	"218.9"	""	"222.3"	"2.9"	"230.7"	"252.6"	""	"182"	"16"	"29.000"	"22.000"	"0.217290826745099"	"18"	"0.003507"	"0.08121"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAMk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"737.37598"	"1473.74468"	"1473.74819"	"-2.39"	"-0.00176"	"8/66"	"8"	"66"	"1491242.85253906"	"HCD"	"MS2"	"0"	"102.9"	"100.000"	"41.3753"	"11338"	"11338"	"11312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.5"	""	"149.7"	""	"148.6"	""	"158.9"	"1.2"	"179.5"	"177.5"	""	"609"	"13"	"34.000"	"27.000"	"1.57974611853869"	"16"	"0.0001859"	"0.0003317"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAMk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.37830"	"1473.74932"	"1473.74819"	"0.76"	"0.00056"	"8/66"	"8"	"66"	"1746397.81658936"	"HCD"	"MS2"	"38.83975"	"139.9"	"100.000"	"41.5061"	"11436"	"11436"	"11405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"238.5"	""	"209.8"	""	"219.2"	""	"183.7"	"0.5"	"228.0"	"242.6"	""	"644"	"30"	"35.000"	"28.000"	"0.030892700334813"	"14"	"0.0001308"	"0.0002391"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFDEYGSK"	"[R].gLFDEYGSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"737.40326"	"1473.79924"	"1473.79897"	"0.19"	"0.00014"	"14/72"	"14"	"72"	"6781422.609375"	"HCD"	"MS2"	"18.4797"	"609.7"	"100.000"	"45.1448"	"12914"	"12914"	"12891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1020.4"	""	"837.9"	""	"853.3"	""	"912.9"	"9.8"	"1101.7"	"1034.5"	""	"881"	"40"	"36.000"	"29.000"	"0.00441515457373315"	"18"	"0.0001859"	"0.0003403"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFDEYGSK"	"[R].gLFDEYGSk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"737.40344"	"1473.79961"	"1473.79897"	"0.44"	"0.00032"	"14/72"	"14"	"72"	"6886245.23791504"	"HCD"	"MS2"	"15.18837"	"601.2"	"100.000"	"44.9198"	"12773"	"12773"	"12752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"982.6"	""	"804.6"	""	"879.9"	""	"875.7"	"5.7"	"1065.7"	"1075.7"	""	"882"	"39"	"36.000"	"29.000"	"0.00614382150098878"	"18"	"0.0001308"	"0.000263"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTYFASIAK"	"[R].nTYFASIAk.[A]"	"N-Term(TMT6plex); N1(Deamidated); K9(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"491.95502"	"1473.85050"	"1473.83535"	"10.28"	"0.00505"	"7/88"	"7"	"88"	"3450743.84979248"	"HCD"	"MS2"	"37.63791"	"141.2"	"100.000"	"43.1559"	"12056"	"12056"	"12041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.0"	""	"213.0"	""	"208.0"	""	"215.8"	"0.3"	"250.4"	"252.8"	""	"896"	"13"	"36.000"	"29.000"	"2.24015471669686"	"15"	"0.009459"	"0.4207"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEILAALEK"	"[K].eEILAALEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"491.96896"	"1473.89234"	"1473.89287"	"-0.36"	"-0.00018"	"9/78"	"9"	"78"	"2191177.36035156"	"HCD"	"MS2"	"4.460797"	"78.1"	"100.000"	"60.1914"	"18978"	"18978"	"18953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.2"	""	"72.6"	""	"86.8"	""	"140.3"	"0.2"	"189.4"	"183.0"	""	"705"	"36"	"35.000"	"28.000"	"0.0085735191319852"	"28"	"0.0001859"	"0.0003708"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISTLEPLK"	"[K].dISTLEPLk.[KR]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"737.45038"	"1473.89348"	"1473.89287"	"0.42"	"0.00031"	"14/74"	"14"	"74"	"1656038.79986572"	"HCD"	"MS2"	"12.05592"	"139.2"	"100.000"	"48.8969"	"14444"	"14444"	"14415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.8"	""	"184.4"	""	"195.8"	""	"238.5"	"0.8"	"246.7"	"263.3"	""	"708"	"42"	"35.000"	"28.000"	"0.00213797814799239"	""	"0"	"0.0001197"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSTIEPLK"	"[K].dLSTIEPLk.[KR]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"737.45038"	"1473.89348"	"1473.89287"	"0.42"	"0.00031"	"14/74"	"14"	"74"	"1656038.79986572"	"HCD"	"MS2"	"12.05592"	"139.2"	"100.000"	"48.8969"	"14444"	"14444"	"14415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.8"	""	"184.4"	""	"195.8"	""	"238.5"	"0.8"	"246.7"	"263.3"	""	"708"	"42"	"35.000"	"28.000"	"0.00213797814799239"	""	"0"	"0.0001197"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTQILFGTLR"	"[R].vPTQILFGTLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63691"	"Monocyte differentiation antigen CD14 OS=Rattus norvegicus OX=10116 GN=Cd14 PE=2 SV=2"	"Q63691"	"Monocyte differentiation antigen CD14 OS=Rattus norvegicus OX=10116 GN=Cd14 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.45294"	"1473.89861"	"1473.89907"	"-0.31"	"-0.00023"	"9/106"	"9"	"106"	"916017.468566895"	"HCD"	"MS2"	"0"	"55.2"	"100.000"	"67.1252"	"21809"	"21809"	"21789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.9"	""	"63.7"	""	"61.0"	""	"108.0"	""	"103.0"	"127.0"	""	"670"	"23"	"35.000"	"28.000"	"0.179079060397985"	"14"	"0.0007793"	"0.00722"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVNAAIATIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"3"	"3"	"0.0702"	"0.0000"	"1"	"1"	"1"	"491.97226"	"1473.90223"	"1473.88381"	"12.49"	"0.00614"	"11/126"	"11"	"126"	"13442283.5637207"	"HCD"	"MS2"	"0"	"375.1"	"100.000"	"46.3398"	"13398"	"13398"	"13376"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"532.5"	""	"431.1"	""	"500.8"	""	"663.5"	""	"717.6"	"711.8"	""	"623"	"57"	"34.000"	"27.000"	"5.86756691376073E-05"	""	"0.0005564"	"0.00351"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVNAAIATIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"2"	"2"	"0.0984"	"0.0000"	"1"	"1"	"1"	"737.45477"	"1473.90227"	"1473.88381"	"12.52"	"0.00923"	"8/126"	"8"	"126"	"6955197.56286621"	"HCD"	"MS2"	"0"	"458.1"	"100.000"	"46.3100"	"13386"	"13386"	"13360"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"651.6"	""	"555.0"	""	"580.4"	""	"805.8"	""	"878.4"	"875.6"	""	"623"	"61"	"34.000"	"27.000"	"2.67582711948931E-05"	""	"0.0007076"	"0.006737"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVNAAIATIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"3"	"3"	"0.0877"	"0.0000"	"1"	"1"	"1"	"491.97235"	"1473.90250"	"1473.88381"	"12.68"	"0.00623"	"11/126"	"11"	"126"	"25809088.0136719"	"HCD"	"MS2"	"10.24654"	"177.7"	"25.581"	"46.6516"	"13525"	"13525"	"13506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"249.1"	""	"192.5"	""	"221.9"	""	"304.0"	""	"357.3"	"362.5"	""	"623"	"57"	"34.000"	"27.000"	"5.81377273695E-05"	""	"0.0005564"	"0.003569"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVNAAIATIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"2"	"2"	"0.1017"	"0.0000"	"1"	"1"	"1"	"737.45496"	"1473.90264"	"1473.88381"	"12.77"	"0.00941"	"8/126"	"8"	"126"	"34561175.3828125"	"HCD"	"MS2"	"0"	"371.2"	"16.351"	"46.6060"	"13507"	"13507"	"13490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"510.7"	""	"414.2"	""	"483.8"	""	"639.9"	"4.5"	"743.7"	"725.4"	""	"623"	"59"	"34.000"	"27.000"	"4.16349503404217E-05"	""	"0.002829"	"0.04568"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVNAAIATIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"3"	"3"	"0.0667"	"0.0000"	"1"	"1"	"1"	"491.97250"	"1473.90296"	"1473.88381"	"12.99"	"0.00638"	"8/126"	"8"	"126"	"19215618.713623"	"HCD"	"MS2"	"4.480859"	"516.2"	"100.000"	"46.0922"	"13248"	"13248"	"13229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"767.2"	""	"610.1"	""	"664.0"	""	"907.6"	"2.3"	"999.9"	"941.5"	""	"621"	"60"	"34.000"	"27.000"	"2.8844406309517E-05"	""	"0.0006037"	"0.005807"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVTTVVNPK"	"[K].sAVTTVVNPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"737.45514"	"1473.90300"	"1473.90410"	"-0.75"	"-0.00055"	"9/84"	"9"	"84"	"2093916.89465332"	"HCD"	"MS2"	"0"	"127.1"	"100.000"	"34.6964"	"8644"	"8644"	"8618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.0"	""	"155.0"	""	"155.2"	""	"243.2"	""	"269.3"	"282.3"	""	"621"	"56"	"34.000"	"27.000"	"7.76357234806741E-05"	"24"	"0"	"2.216E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVNAAIATIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"3"	"3"	"0.0741"	"0.0000"	"1"	"1"	"1"	"491.97253"	"1473.90305"	"1473.88381"	"13.05"	"0.00641"	"8/126"	"8"	"126"	"16596769.947876"	"HCD"	"MS2"	"7.031687"	"278.2"	"56.089"	"46.3946"	"13372"	"13372"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"355.5"	""	"312.7"	""	"363.4"	""	"464.9"	""	"567.0"	"581.5"	""	"621"	"54"	"34.000"	"27.000"	"0.000137107623903204"	""	"0.0006037"	"0.005336"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVNAAIATIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"2"	"2"	"0.0984"	"0.0000"	"1"	"1"	"1"	"737.45532"	"1473.90337"	"1473.88381"	"13.27"	"0.00978"	"8/126"	"8"	"126"	"16320164.3686523"	"HCD"	"MS2"	"0"	"883.8"	"87.430"	"46.0829"	"13245"	"13245"	"13229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1324.6"	""	"1022.0"	""	"1122.6"	""	"1564.9"	""	"1683.3"	"1661.1"	""	"615"	"61"	"34.000"	"27.000"	"2.59325438012515E-05"	""	"0.001966"	"0.03054"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVNAAIATIKTK.[R]"	"N-Term(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"2"	"2"	"0.0984"	"0.0000"	"1"	"1"	"1"	"737.45544"	"1473.90361"	"1473.88381"	"13.44"	"0.00990"	"8/126"	"8"	"126"	"15324122.1135254"	"HCD"	"MS2"	"0"	"482.5"	"46.847"	"46.3853"	"13369"	"13369"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"657.8"	""	"520.8"	""	"619.5"	""	"807.8"	"3.2"	"985.1"	"985.2"	""	"606"	"61"	"34.000"	"27.000"	"2.5848933454733E-05"	""	"0.001966"	"0.03094"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLVGDGGTGK"	"[K].lVLVGDGGTGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"491.97272"	"1473.90360"	"1473.90410"	"-0.34"	"-0.00017"	"16/86"	"16"	"86"	"10880404.8796997"	"HCD"	"MS2"	"39.95234"	"228.0"	"72.594"	"44.8344"	"12787"	"12787"	"12771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"328.7"	""	"333.4"	""	"353.7"	""	"331.2"	""	"403.8"	"413.8"	""	"606"	"30"	"34.000"	"27.000"	"0.0328429854948424"	"19"	"7.476E-05"	"0.0001985"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVTTVVNPK"	"[K].sAVTTVVNPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"737.45551"	"1473.90373"	"1473.90410"	"-0.25"	"-0.00018"	"16/84"	"16"	"84"	"1749361.0491333"	"HCD"	"MS2"	"0"	"110.2"	"100.000"	"34.6114"	"8566"	"8566"	"8547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.8"	""	"142.9"	""	"139.0"	""	"193.1"	""	"230.3"	"238.6"	""	"606"	"63"	"34.000"	"27.000"	"1.50814336748617E-05"	"24"	"0"	"3.464E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLVGDGGTGK"	"[K].lVLVGDGGTGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.7377"	"0.0000"	"1"	"1"	"1"	"737.45587"	"1473.90447"	"1473.90410"	"0.25"	"0.00018"	"10/86"	"10"	"86"	"16789048.5681152"	"HCD"	"MS2"	"19.65321"	"396.8"	"36.715"	"44.4079"	"12564"	"12564"	"12555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"694.1"	""	"679.0"	""	"648.4"	""	"587.9"	"0.8"	"600.4"	"533.5"	""	"609"	"61"	"34.000"	"27.000"	"2.1856836169213E-05"	""	"0"	"3.18E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLVGDGGTGK"	"[K].lVLVGDGGTGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"491.97311"	"1473.90479"	"1473.90410"	"0.47"	"0.00023"	"8/86"	"8"	"86"	"12051778.7906494"	"HCD"	"MS2"	"31.83764"	"143.9"	"40.258"	"44.5821"	"12635"	"12635"	"12616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.1"	""	"228.5"	""	"219.9"	""	"205.7"	"0.5"	"256.9"	"247.6"	""	"609"	"42"	"34.000"	"27.000"	"0.00201181154918313"	"22"	"0"	"0.0001092"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLVGDGGTGK"	"[K].lVLVGDGGTGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"737.45630"	"1473.90532"	"1473.90410"	"0.83"	"0.00061"	"5/86"	"5"	"86"	"2216241.59484863"	"HCD"	"MS2"	"43.38451"	"182.7"	"100.000"	"45.0297"	"12867"	"12867"	"12843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.8"	""	"242.6"	""	"261.3"	""	"291.1"	""	"327.7"	"325.4"	""	"609"	"28"	"34.000"	"27.000"	"0.0489313611542421"	""	"0.0001308"	"0.0002473"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLVGDGGTGK"	"[K].lVLVGDGGTGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.6981"	"0.0000"	"1"	"1"	"1"	"737.45636"	"1473.90544"	"1473.90410"	"0.91"	"0.00067"	"8/86"	"8"	"86"	"19939471.6235352"	"HCD"	"MS2"	"12.45583"	"529.4"	"43.551"	"44.7084"	"12736"	"12736"	"12721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"936.6"	""	"869.9"	""	"898.9"	""	"788.8"	"1.0"	"791.5"	"707.5"	""	"609"	"53"	"34.000"	"27.000"	"0.000140148126655523"	""	"0"	"4.477E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLVGDGGTGK"	"[K].lVLVGDGGTGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"737.45770"	"1473.90813"	"1473.90410"	"2.73"	"0.00201"	"7/86"	"7"	"86"	"2083230.16534424"	"HCD"	"MS2"	"38.84869"	"161.9"	"100.000"	"44.7724"	"12713"	"12713"	"12688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.0"	""	"232.4"	""	"240.7"	""	"255.7"	""	"289.2"	"282.2"	""	"594"	"35"	"34.000"	"27.000"	"0.00915706821224059"	"24"	"7.476E-05"	"0.0001986"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLGNSWK"	"[K].iVVLGNSWk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.7755"	"0.0000"	"1"	"1"	"1"	"491.97729"	"1473.91733"	"1473.91936"	"-1.37"	"-0.00067"	"7/70"	"7"	"70"	"13285709.223877"	"HCD"	"MS2"	"26.54019"	"353.6"	"100.000"	"57.8896"	"18096"	"18096"	"18069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"471.0"	""	"551.4"	""	"588.4"	""	"526.3"	"0.0"	"580.0"	"628.1"	""	"537"	"49"	"34.000"	"27.000"	"0.000353951934302396"	"27"	"0.0001889"	"0.0009276"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLGNSWK"	"[K].iVVLGNSWk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"737.46259"	"1473.91789"	"1473.91936"	"-0.99"	"-0.00073"	"14/70"	"14"	"70"	"18601101.4917603"	"HCD"	"MS2"	"26.5106"	"768.7"	"65.480"	"57.8710"	"18088"	"18088"	"18069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1115.4"	""	"1263.8"	""	"1226.2"	""	"1079.8"	"2.0"	"1232.6"	"1349.7"	""	"536"	"40"	"34.000"	"27.000"	"0.00282575688232857"	""	"0.0001859"	"0.0003508"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLGNSWK"	"[K].iVVLGNSWk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"737.46301"	"1473.91875"	"1473.91936"	"-0.41"	"-0.00030"	"8/70"	"8"	"70"	"8313764.20233154"	"HCD"	"MS2"	"29.06515"	"544.8"	"87.516"	"58.1870"	"18217"	"18217"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"707.1"	""	"804.2"	""	"824.9"	""	"797.8"	""	"981.2"	"1051.4"	""	"532"	"23"	"34.000"	"27.000"	"0.133009186303876"	""	"0.0001889"	"0.0007194"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLGNSWK"	"[K].iVVLGNSWk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.7679"	"0.0000"	"1"	"1"	"1"	"491.97778"	"1473.91880"	"1473.91936"	"-0.38"	"-0.00019"	"7/70"	"7"	"70"	"13361419.8955688"	"HCD"	"MS2"	"23.42273"	"365.5"	"100.000"	"57.7137"	"17970"	"17970"	"17947"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"496.3"	""	"548.1"	""	"587.9"	""	"533.9"	"0.1"	"615.5"	"677.8"	""	"532"	"56"	"34.000"	"27.000"	"7.01264148629552E-05"	""	"0.000523"	"0.003162"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLGNSWK"	"[K].iVVLGNSWk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"737.46313"	"1473.91899"	"1473.91936"	"-0.25"	"-0.00018"	"14/70"	"14"	"70"	"18621016.0941772"	"HCD"	"MS2"	"19.1659"	"985.7"	"75.986"	"57.7021"	"17965"	"17965"	"17947"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1371.0"	""	"1576.2"	""	"1617.5"	""	"1411.9"	""	"1590.0"	"1763.0"	""	"532"	"41"	"34.000"	"27.000"	"0.00203180318431666"	""	"0.0001859"	"0.0003383"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQIAELTK"	"[R].lVqIAELTk.[V]"	"N-Term(TMT6plex); Q3(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"737.46320"	"1473.91911"	"1473.92925"	"-6.88"	"-0.00507"	"8/80"	"8"	"80"	"7560506.05212402"	"HCD"	"MS2"	"31.61202"	"498.9"	"93.247"	"58.0151"	"18093"	"18093"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"697.0"	""	"700.3"	""	"757.6"	""	"732.7"	""	"872.7"	"976.8"	""	"532"	"22"	"34.000"	"27.000"	"0.156632412324587"	""	"0.0006737"	"0.006559"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQIAELTK"	"[R].lVqIAELTk.[V]"	"N-Term(TMT6plex); Q3(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"Q80T18"	"Glia maturation factor gamma OS=Rattus norvegicus OX=10116 GN=Gmfg PE=2 SV=1"	"0"	"3"	"3"	"0.1111"	"0.0000"	"1"	"1"	"1"	"491.97812"	"1473.91980"	"1473.92925"	"-6.41"	"-0.00315"	"10/80"	"10"	"80"	"5607176.96295166"	"HCD"	"MS2"	"38.20818"	"175.2"	"100.000"	"58.0429"	"18105"	"18105"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.1"	""	"233.6"	""	"260.2"	""	"276.2"	"0.0"	"316.2"	"341.5"	""	"501"	"18"	"33.000"	"26.000"	"0.4363226217846"	""	"0.003286"	"0.07141"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEDGPK"	"[K].kLEDGPk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"737.46436"	"1473.92143"	"1473.92439"	"-2.01"	"-0.00148"	"10/62"	"10"	"62"	"3725552.01275635"	"HCD"	"MS2"	"0"	"292.4"	"100.000"	"27.9942"	"5914"	"5914"	"5884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"417.9"	""	"344.9"	""	"392.8"	""	"511.8"	""	"564.8"	"542.0"	""	"502"	"22"	"33.000"	"27.000"	"0.164313679690886"	"23"	"0.003286"	"0.0709"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEDGPK"	"[K].kLEDGPk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"491.97913"	"1473.92282"	"1473.92439"	"-1.06"	"-0.00052"	"6/62"	"6"	"62"	"49886526.2044678"	"HCD"	"MS2"	"11.83867"	"1848.7"	"51.058"	"28.0504"	"5971"	"5971"	"5953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2654.9"	""	"2280.8"	""	"2510.9"	""	"3278.4"	""	"3464.5"	"3358.6"	""	"525"	"8"	"34.000"	"27.000"	"3.71645867238734"	"18"	"0.00162"	"0.02222"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEDGPK"	"[K].kLEDGPk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"737.46521"	"1473.92314"	"1473.92439"	"-0.85"	"-0.00062"	"6/62"	"6"	"62"	"3213550.63885498"	"HCD"	"MS2"	"0"	"256.3"	"100.000"	"28.0667"	"5978"	"5978"	"5953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"357.1"	""	"302.0"	""	"352.8"	""	"457.3"	""	"485.3"	"476.8"	""	"525"	"27"	"34.000"	"27.000"	"0.0526173907183355"	"25"	"0.00119"	"0.01613"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEDGPK"	"[K].kLEDGPk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"491.97925"	"1473.92319"	"1473.92439"	"-0.81"	"-0.00040"	"6/62"	"6"	"62"	"66144678.5349121"	"HCD"	"MS2"	"10.99566"	"1673.6"	"34.888"	"28.0107"	"5920"	"5920"	"5900"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2373.4"	""	"2102.9"	""	"2217.2"	""	"2968.7"	""	"3130.4"	"3072.5"	""	"525"	"7"	"34.000"	"27.000"	"5.82276560197558"	"17"	"0.001158"	"0.01544"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATGPGQK"	"[K].kATGPGQk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"1"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"491.98273"	"1473.93363"	"1473.93562"	"-1.35"	"-0.00067"	"7/70"	"7"	"70"	"3936377.4432373"	"HCD"	"MS2"	"22.57305"	"250.3"	"100.000"	"23.4242"	"4093"	"4093"	"4085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"392.6"	""	"391.8"	""	"380.6"	""	"391.0"	""	"430.2"	"380.5"	""	"386"	"19"	"32.000"	"25.000"	"0.235264992592499"	"16"	"0.0002277"	"0.001192"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATGPGQK"	"[K].kATGPGQk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"1"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"491.98276"	"1473.93372"	"1473.93562"	"-1.29"	"-0.00063"	"12/70"	"12"	"70"	"4292032.74609375"	"HCD"	"MS2"	"22.05921"	"269.2"	"100.000"	"23.3956"	"4047"	"4047"	"4039"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"419.3"	""	"415.4"	""	"410.4"	""	"413.1"	""	"477.8"	"412.1"	""	"386"	"16"	"32.000"	"25.000"	"0.479244689322045"	"16"	"0.0004557"	"0.002537"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAmFR.[R]"	"N-Term(TMT6plex); M8(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"737.88129"	"1474.75530"	"1474.75617"	"-0.59"	"-0.00043"	"8/92"	"8"	"92"	"2371596.4810791"	"HCD"	"MS2"	"14.3769"	"150.0"	"100.000"	"47.5685"	"13852"	"13852"	"13832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.6"	""	"185.0"	""	"200.1"	""	"259.6"	"2.6"	"326.8"	"276.6"	""	"715"	"44"	"35.000"	"28.000"	"0.00153206096042085"	"22"	"0.00162"	"0.02193"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAmFR.[R]"	"N-Term(TMT6plex); M8(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"737.88171"	"1474.75615"	"1474.75617"	"-0.01"	"-0.00001"	"8/92"	"8"	"92"	"8261565.25012207"	"HCD"	"MS2"	"40.68816"	"352.6"	"100.000"	"47.5559"	"13895"	"13895"	"13874"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"408.7"	""	"442.5"	""	"516.1"	""	"701.4"	"1.9"	"635.0"	"635.5"	""	"735"	"45"	"35.000"	"28.000"	"0.0012919846189415"	"20"	"0.0006037"	"0.005531"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAmFR.[R]"	"N-Term(TMT6plex); M8(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"737.88171"	"1474.75615"	"1474.75617"	"-0.01"	"-0.00001"	"8/92"	"8"	"92"	"8003358.2855835"	"HCD"	"MS2"	"64.18752"	"338.7"	"100.000"	"47.2783"	"13734"	"13734"	"13704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.8"	""	"424.0"	""	"479.0"	""	"661.8"	"0.3"	"648.2"	"625.6"	""	"735"	"37"	"35.000"	"28.000"	"0.00791147287511207"	"19"	"0.0006037"	"0.004053"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQFTAMFR"	"[R].iSEQFTAmFR.[R]"	"N-Term(TMT6plex); M8(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"737.88251"	"1474.75774"	"1474.75617"	"1.07"	"0.00079"	"8/92"	"8"	"92"	"2089444.08551025"	"HCD"	"MS2"	"21.07988"	"144.6"	"100.000"	"47.8870"	"14031"	"14031"	"14002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.3"	""	"174.7"	""	"183.0"	""	"243.3"	"1.2"	"307.7"	"289.6"	""	"734"	"21"	"35.000"	"28.000"	"0.279682996679326"	"20"	"0.003197"	"0.06574"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHSFLAFPTLR"	"[K].gHSFLAFPTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"492.28384"	"1474.83698"	"1474.83680"	"0.12"	"0.00006"	"7/92"	"7"	"92"	"4606727.77807617"	"HCD"	"MS2"	"30.19961"	"93.1"	"100.000"	"47.8893"	"14032"	"14032"	"14002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.6"	""	"127.8"	""	"134.3"	""	"140.4"	"1.2"	"173.5"	"179.5"	""	"985"	"32"	"36.000"	"29.000"	"0.0343879459008007"	"20"	"0"	"5.371E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLGNSWK"	"[K].iVVLGnSWk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.95459"	"1474.90190"	"1474.90337"	"-1.00"	"-0.00073"	"6/70"	"6"	"70"	"4349687.17810059"	"HCD"	"MS2"	"21.98277"	"286.3"	"100.000"	"61.1320"	"19415"	"19415"	"19395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"387.8"	""	"381.4"	""	"386.4"	""	"462.2"	"5.0"	"520.8"	"570.3"	""	"690"	"44"	"35.000"	"28.000"	"0.00137031084566957"	"15"	"0.0001308"	"0.0002084"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLGNSWK"	"[K].iVVLGnSWk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.30563"	"1474.90235"	"1474.90337"	"-0.69"	"-0.00034"	"7/70"	"7"	"70"	"3949104.72753906"	"HCD"	"MS2"	"22.75859"	"142.3"	"100.000"	"61.2216"	"19452"	"19452"	"19427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.8"	""	"173.6"	""	"190.0"	""	"234.0"	"1.1"	"284.4"	"285.4"	""	"676"	"41"	"35.000"	"28.000"	"0.00287023000562274"	"15"	"0.0001889"	"0.0006276"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLGNSWK"	"[K].iVVLGnSWk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.95557"	"1474.90386"	"1474.90337"	"0.33"	"0.00024"	"6/70"	"6"	"70"	"4009182.6986084"	"HCD"	"MS2"	"12.59686"	"264.4"	"100.000"	"60.9708"	"19296"	"19296"	"19273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"364.6"	""	"361.1"	""	"367.8"	""	"430.2"	""	"489.2"	"495.0"	""	"615"	"41"	"34.000"	"27.000"	"0.00240350549910912"	"15"	"0"	"0.0001661"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGATMLLAK"	"[R].vPGATmLLAk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"492.30615"	"1474.90390"	"1474.90674"	"-1.92"	"-0.00095"	"9/72"	"9"	"72"	"6575056.28820801"	"HCD"	"MS2"	"25.18441"	"210.3"	"100.000"	"47.3254"	"13801"	"13801"	"13778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"256.2"	""	"304.2"	""	"329.5"	""	"415.3"	""	"330.1"	"354.7"	""	"615"	"30"	"34.000"	"27.000"	"0.0285657163934831"	"21"	"0.0004166"	"0.002262"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVVLGNSWK"	"[K].iVVLGnSWk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.30655"	"1474.90509"	"1474.90337"	"1.17"	"0.00057"	"7/70"	"7"	"70"	"3859297.859375"	"HCD"	"MS2"	"29.73774"	"146.1"	"100.000"	"61.0603"	"19333"	"19333"	"19305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.8"	""	"186.2"	"2.1"	"194.9"	""	"237.8"	"2.3"	"286.4"	"281.2"	""	"615"	"40"	"34.000"	"27.000"	"0.00292984820437273"	"15"	"0.0001889"	"0.0003923"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGATMLLAK"	"[R].vPGATmLLAk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"737.95636"	"1474.90544"	"1474.90674"	"-0.88"	"-0.00065"	"8/72"	"8"	"72"	"9499947.30487061"	"HCD"	"MS2"	"0"	"390.5"	"80.766"	"47.0547"	"13642"	"13642"	"13624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"511.6"	""	"549.8"	""	"622.0"	""	"807.0"	""	"603.5"	"598.6"	""	"615"	"39"	"34.000"	"27.000"	"0.00376569481274003"	"23"	"0.0001889"	"0.0004161"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGATMLLAK"	"[R].vPGATmLLAk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"492.30670"	"1474.90555"	"1474.90674"	"-0.81"	"-0.00040"	"9/72"	"9"	"72"	"4965277.14935303"	"HCD"	"MS2"	"26.27159"	"157.0"	"100.000"	"47.1125"	"13666"	"13666"	"13640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.5"	""	"218.1"	""	"244.2"	""	"310.0"	"1.8"	"265.7"	"260.3"	""	"615"	"34"	"34.000"	"27.000"	"0.0115570001818697"	"23"	"0.000523"	"0.002877"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGLNSVATAR"	"[K].kGLNSVATAR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.30743"	"1474.90775"	"1474.91058"	"-1.92"	"-0.00094"	"8/96"	"8"	"96"	"2088830.84649658"	"HCD"	"MS2"	"14.98622"	"162.9"	"100.000"	"27.3587"	"5688"	"5688"	"5666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.4"	""	"247.3"	""	"230.5"	""	"252.3"	""	"264.7"	"276.1"	""	"630"	"14"	"34.000"	"27.000"	"1.37186240210954"	"13"	"0"	"0.0001382"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGATMLLAK"	"[R].vPGATmLLAk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"737.95782"	"1474.90837"	"1474.90674"	"1.11"	"0.00081"	"8/72"	"8"	"72"	"5520987.85137939"	"HCD"	"MS2"	"5.854818"	"273.2"	"100.000"	"47.4269"	"13843"	"13843"	"13826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"335.4"	""	"364.9"	""	"393.3"	""	"558.9"	""	"458.9"	"481.2"	""	"630"	"37"	"34.000"	"27.000"	"0.00700342615555191"	"22"	"0.0001889"	"0.0005978"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGLNSVATAR"	"[K].kGLNSVATAR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.30798"	"1474.90940"	"1474.91058"	"-0.80"	"-0.00040"	"9/96"	"9"	"96"	"3627060.1885376"	"HCD"	"MS2"	"34.22442"	"238.3"	"100.000"	"27.2380"	"5604"	"5604"	"5587"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.6"	""	"366.8"	""	"367.6"	""	"381.4"	"3.2"	"408.1"	"372.5"	""	"590"	"17"	"34.000"	"27.000"	"0.654367943841064"	"14"	"0"	"0.0001211"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSALVDGK"	"[K].lTLSALVDGk.[SN]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P81155; Q9R1Z0"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2;Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"P81155; Q9R1Z0"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2; Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"737.96460"	"1474.92192"	"1474.92450"	"-1.75"	"-0.00129"	"16/84"	"16"	"84"	"8348932.16662598"	"HCD"	"MS2"	"6.927994"	"472.3"	"100.000"	"63.0527"	"20199"	"20199"	"20179"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"568.7"	""	"684.6"	""	"700.0"	""	"729.2"	"10.0"	"834.1"	"950.1"	""	"515"	"56"	"34.000"	"27.000"	"6.48301808897905E-05"	"22"	"0"	"9.927E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSALVDGK"	"[K].lTLSALVDGk.[SN]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P81155; Q9R1Z0"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2;Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"P81155; Q9R1Z0"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2; Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"492.31247"	"1474.92286"	"1474.92450"	"-1.12"	"-0.00055"	"7/84"	"7"	"84"	"7410350.83648682"	"HCD"	"MS2"	"7.13481"	"224.5"	"100.000"	"63.0248"	"20188"	"20188"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"265.0"	""	"332.1"	""	"357.5"	""	"351.0"	""	"382.1"	"443.8"	""	"501"	"50"	"33.000"	"26.000"	"0.000258111723170625"	"25"	"0.0001308"	"0.0002189"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNILDTLSK"	"[R].lNILDTLSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"737.96521"	"1474.92314"	"1474.92450"	"-0.92"	"-0.00068"	"14/84"	"14"	"84"	"3301643.16253662"	"HCD"	"MS2"	"4.44942"	"245.3"	"100.000"	"65.2830"	"21110"	"21110"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"367.2"	""	"323.3"	""	"338.3"	""	"412.6"	""	"420.3"	"462.3"	""	"499"	"46"	"33.000"	"26.000"	"0.000559848539983799"	"22"	"0.0001308"	"0.0002251"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNILDTLSK"	"[R].lNILDTLSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"492.31259"	"1474.92322"	"1474.92450"	"-0.87"	"-0.00043"	"9/84"	"9"	"84"	"3891885.84912109"	"HCD"	"MS2"	"20.96963"	"125.8"	"100.000"	"65.4040"	"21107"	"21107"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.7"	""	"167.5"	""	"171.2"	""	"222.9"	""	"221.4"	"236.5"	""	"499"	"34"	"33.000"	"26.000"	"0.00914261748746343"	"21"	"0.0001889"	"0.0007001"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNILDTLSK"	"[R].lNILDTLSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"492.31259"	"1474.92322"	"1474.92450"	"-0.87"	"-0.00043"	"11/84"	"11"	"84"	"3532961.79754639"	"HCD"	"MS2"	"11.98074"	"118.7"	"100.000"	"65.3753"	"21148"	"21148"	"21123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.4"	""	"152.9"	""	"165.2"	""	"197.0"	""	"222.8"	"223.1"	""	"499"	"24"	"33.000"	"26.000"	"0.104488994496921"	"19"	"0.0003839"	"0.001555"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSALVDGK"	"[K].lTLSALVDGk.[SN]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P81155; Q9R1Z0"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2;Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"P81155; Q9R1Z0"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2; Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"492.31308"	"1474.92469"	"1474.92450"	"0.13"	"0.00006"	"9/84"	"9"	"84"	"8505898.41882324"	"HCD"	"MS2"	"5.702435"	"269.5"	"100.000"	"62.9687"	"20112"	"20112"	"20089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"329.6"	""	"405.4"	""	"404.1"	""	"424.3"	""	"473.5"	"520.3"	""	"483"	"38"	"33.000"	"26.000"	"0.00378370383431118"	"21"	"0.0001889"	"0.0003935"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNILDTLSK"	"[R].lNILDTLSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"737.96600"	"1474.92473"	"1474.92450"	"0.16"	"0.00011"	"8/84"	"8"	"84"	"2998125.98144531"	"HCD"	"MS2"	"19.05741"	"224.8"	"100.000"	"65.3165"	"21071"	"21071"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.0"	""	"293.6"	""	"314.8"	""	"401.1"	"1.4"	"391.0"	"393.1"	""	"483"	"42"	"33.000"	"26.000"	"0.00160293951502061"	"19"	"0"	"0.0001466"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGLETVGVK"	"[R].tIGLETVGVk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"737.96625"	"1474.92522"	"1474.92450"	"0.49"	"0.00036"	"9/82"	"9"	"82"	"5398732.28302002"	"HCD"	"MS2"	"5.586586"	"391.8"	"100.000"	"46.9298"	"13639"	"13639"	"13618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"571.6"	""	"581.2"	""	"607.0"	""	"609.4"	"0.7"	"654.1"	"683.1"	""	"492"	"64"	"33.000"	"26.000"	"1.09379291797401E-05"	""	"0"	"3.816E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGLETVGVK"	"[R].tIGLETVGVk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.7424"	"0.0000"	"1"	"1"	"1"	"737.96625"	"1474.92522"	"1474.92450"	"0.49"	"0.00036"	"9/82"	"9"	"82"	"5660006.62786865"	"HCD"	"MS2"	"13.02805"	"399.9"	"100.000"	"46.6381"	"13472"	"13472"	"13448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"599.3"	""	"590.9"	""	"605.7"	""	"617.7"	""	"688.1"	"684.1"	""	"492"	"66"	"33.000"	"26.000"	"6.88549404630054E-06"	""	"0"	"5.63E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSALVDGK"	"[K].lTLSALVDGk.[SN]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P81155; Q9R1Z0"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2;Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"P81155; Q9R1Z0"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2; Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"737.96631"	"1474.92534"	"1474.92450"	"0.57"	"0.00042"	"9/84"	"9"	"84"	"4961129.51525879"	"HCD"	"MS2"	"8.412236"	"292.7"	"100.000"	"62.8972"	"20083"	"20083"	"20057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"341.6"	""	"442.2"	""	"434.8"	""	"461.3"	"3.7"	"520.3"	"570.6"	""	"492"	"50"	"33.000"	"26.000"	"0.000238745451942391"	"23"	"0"	"5.235E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGLETVGVK"	"[R].tIGLETVGVk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"492.31369"	"1474.92652"	"1474.92450"	"1.37"	"0.00067"	"6/82"	"6"	"82"	"3172492.51055908"	"HCD"	"MS2"	"31.44655"	"127.6"	"100.000"	"46.7325"	"13511"	"13511"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.3"	""	"172.2"	""	"178.1"	""	"200.2"	"1.6"	"236.5"	"250.4"	""	"502"	"16"	"33.000"	"27.000"	"0.584350905673917"	"15"	"0.0006037"	"0.003762"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHFFLYK"	"[R].yHFFLYk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"492.61984"	"1475.84497"	"1475.84513"	"-0.10"	"-0.00005"	"10/50"	"10"	"50"	"6661325.70379639"	"HCD"	"MS2"	"9.247373"	"196.3"	"100.000"	"48.3946"	"14191"	"14191"	"14160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"263.7"	""	"282.5"	""	"327.7"	""	"360.7"	"0.4"	"326.5"	"295.1"	""	"1058"	"25"	"37.000"	"30.000"	"0.150818866350957"	"22"	"0.0001889"	"0.0007769"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHFFLYK"	"[R].yHFFLYk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"492.62009"	"1475.84571"	"1475.84513"	"0.39"	"0.00019"	"9/50"	"9"	"50"	"7482440.62866211"	"HCD"	"MS2"	"6.107504"	"211.0"	"100.000"	"48.7384"	"14379"	"14379"	"14351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.0"	""	"285.4"	""	"333.8"	""	"369.5"	""	"378.8"	"343.6"	""	"1060"	"22"	"37.000"	"30.000"	"0.316428701889434"	"23"	"0.0002277"	"0.00117"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASENAIVWK"	"[K].aSENAIVWk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"738.43323"	"1475.85918"	"1475.86224"	"-2.07"	"-0.00153"	"8/76"	"8"	"76"	"1106592.27215576"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"42.0263"	"11602"	"11602"	"11586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.2"	""	"128.4"	"3.0"	"158.5"	""	"166.1"	"3.0"	"207.4"	"211.1"	""	"980"	"34"	"36.000"	"29.000"	"0.0208063586333693"	"28"	"0"	"0.0001325"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"492.62463"	"1475.85935"	"1475.86224"	"-1.96"	"-0.00096"	"7/78"	"7"	"78"	"14079908.1035156"	"HCD"	"MS2"	"28.8876"	"334.0"	"63.581"	"40.8688"	"11130"	"11130"	"11109"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.4"	""	"443.5"	""	"487.4"	""	"408.9"	""	"781.0"	"587.3"	""	"984"	"21"	"36.000"	"29.000"	"0.380158847867085"	"20"	"0.0006037"	"0.004425"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9636"	"0.0000"	"1"	"1"	"1"	"738.43420"	"1475.86113"	"1475.86224"	"-0.75"	"-0.00055"	"8/78"	"8"	"78"	"18543636.713501"	"HCD"	"MS2"	"0"	"410.6"	"34.682"	"39.8793"	"10726"	"10726"	"10709"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"618.3"	""	"599.3"	""	"596.8"	""	"545.6"	""	"791.6"	"740.4"	""	"972"	"55"	"36.000"	"29.000"	"0.000160190320118245"	"18"	"0.0001889"	"0.0003992"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"738.43420"	"1475.86113"	"1475.86224"	"-0.75"	"-0.00055"	"8/78"	"8"	"78"	"18954959.4416504"	"HCD"	"MS2"	"0"	"528.8"	"42.228"	"39.9912"	"10815"	"10815"	"10797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"795.0"	""	"773.8"	""	"775.7"	""	"701.9"	"0.9"	"1005.6"	"956.1"	""	"972"	"51"	"36.000"	"29.000"	"0.000361107301017797"	"19"	"0.0001308"	"0.0002752"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"492.62524"	"1475.86118"	"1475.86626"	"-3.44"	"-0.00169"	"9/56"	"9"	"56"	"4661483.92218018"	"HCD"	"MS2"	"20.59971"	"120.9"	"100.000"	"50.4110"	"15056"	"15056"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.8"	""	"181.8"	""	"136.4"	""	"209.7"	"2.2"	"236.8"	"199.5"	""	"972"	"31"	"36.000"	"29.000"	"0.0429176831603422"	"24"	"0.0003146"	"0.001426"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"492.62534"	"1475.86145"	"1475.86224"	"-0.53"	"-0.00026"	"8/78"	"8"	"78"	"255950106.947754"	"HCD"	"MS2"	"10.38454"	"1650.4"	"25.852"	"39.6406"	"10673"	"10673"	"10654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2692.7"	""	"2568.3"	""	"2385.8"	""	"2391.3"	""	"2983.0"	"2610.3"	""	"975"	"27"	"36.000"	"29.000"	"0.094618186532648"	"16"	"0.0001889"	"0.001086"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"492.62540"	"1475.86164"	"1475.86224"	"-0.41"	"-0.00020"	"6/78"	"6"	"78"	"77614987.6914063"	"HCD"	"MS2"	"5.394823"	"258.8"	"12.868"	"40.2622"	"10926"	"10926"	"10909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"400.6"	""	"385.1"	""	"366.7"	""	"364.2"	"0.6"	"482.7"	"450.9"	""	"966"	"36"	"36.000"	"29.000"	"0.0129403830088759"	"24"	"0.0003839"	"0.001885"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"492.62549"	"1475.86191"	"1475.86224"	"-0.22"	"-0.00011"	"8/78"	"8"	"78"	"262520895.087158"	"HCD"	"MS2"	"13.22179"	"1805.1"	"24.889"	"39.5289"	"10584"	"10584"	"10566"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2887.2"	""	"2804.7"	""	"2621.8"	""	"2658.4"	""	"3260.7"	"2867.3"	""	"966"	"26"	"36.000"	"29.000"	"0.11559715103438"	"17"	"0.0001889"	"0.001074"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"738.43463"	"1475.86199"	"1475.86224"	"-0.17"	"-0.00012"	"8/78"	"8"	"78"	"28977485.0073242"	"HCD"	"MS2"	"0"	"1768.3"	"100.000"	"39.6841"	"10691"	"10691"	"10670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2932.8"	""	"2687.8"	""	"2556.4"	""	"2589.9"	"6.2"	"3140.9"	"2812.1"	""	"966"	"55"	"36.000"	"29.000"	"0.000161788307113231"	"24"	"0.0001308"	"0.0002777"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"492.62555"	"1475.86209"	"1475.86224"	"-0.10"	"-0.00005"	"6/78"	"6"	"78"	"91425148.2192383"	"HCD"	"MS2"	"5.607551"	"276.7"	"11.057"	"40.1150"	"10822"	"10822"	"10805"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"423.5"	""	"418.1"	""	"412.2"	""	"368.9"	"0.6"	"512.3"	"484.6"	""	"966"	"38"	"36.000"	"29.000"	"0.00831662521718241"	"25"	"0.0001889"	"0.0007485"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.62561"	"1475.86228"	"1475.86224"	"0.03"	"0.00001"	"6/78"	"6"	"78"	"11777393.1539917"	"HCD"	"MS2"	"11.87716"	"387.8"	"100.000"	"40.5615"	"11004"	"11004"	"10981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"571.0"	""	"560.5"	""	"586.6"	""	"543.7"	""	"735.3"	"676.9"	""	"968"	"34"	"36.000"	"29.000"	"0.0203163348251648"	"15"	"0.0001889"	"0.0009969"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"738.43481"	"1475.86235"	"1475.86224"	"0.08"	"0.00006"	"8/78"	"8"	"78"	"30593606.3764038"	"HCD"	"MS2"	"0"	"1803.7"	"91.475"	"39.5727"	"10602"	"10602"	"10582"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2929.0"	""	"2827.6"	""	"2605.9"	""	"2572.2"	"3.4"	"3252.7"	"2873.6"	""	"965"	"51"	"36.000"	"29.000"	"0.000408787227322838"	"22"	"0.0001859"	"0.0003249"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.62567"	"1475.86246"	"1475.86224"	"0.15"	"0.00008"	"6/78"	"6"	"78"	"22271374.3071289"	"HCD"	"MS2"	"14.87419"	"515.1"	"66.527"	"40.9100"	"11191"	"11191"	"11165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"401.8"	""	"417.9"	""	"654.2"	""	"429.3"	""	"2151.4"	"918.7"	""	"954"	"30"	"36.000"	"29.000"	"0.0433030392894995"	"14"	"0.0001889"	"0.0009637"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"492.62582"	"1475.86292"	"1475.86626"	"-2.26"	"-0.00111"	"9/56"	"9"	"56"	"9664178.03741455"	"HCD"	"MS2"	"28.84706"	"217.6"	"93.688"	"50.0514"	"14911"	"14911"	"14894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"335.4"	""	"331.9"	""	"238.4"	""	"363.2"	""	"398.1"	"397.2"	""	"949"	"36"	"36.000"	"29.000"	"0.0131291381074776"	"27"	"0.0004166"	"0.002149"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"492.62589"	"1475.86310"	"1475.86626"	"-2.14"	"-0.00105"	"8/56"	"8"	"56"	"6471364.15362549"	"HCD"	"MS2"	"40.59982"	"149.8"	"100.000"	"49.8453"	"14780"	"14780"	"14762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.6"	""	"225.6"	""	"174.9"	""	"250.9"	""	"277.7"	"258.5"	""	"949"	"27"	"36.000"	"29.000"	"0.087143744391879"	"22"	"0.0003571"	"0.001494"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"492.62595"	"1475.86328"	"1475.86626"	"-2.01"	"-0.00099"	"8/56"	"8"	"56"	"3115470.41937256"	"HCD"	"MS2"	"24.31958"	"87.2"	"100.000"	"50.4419"	"15018"	"15018"	"14999"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.8"	""	"127.1"	""	"112.3"	""	"142.5"	"3.0"	"163.6"	"153.5"	""	"949"	"28"	"36.000"	"29.000"	"0.0690615333736143"	"23"	"0.0002277"	"0.001318"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"738.43542"	"1475.86357"	"1475.86224"	"0.91"	"0.00067"	"8/78"	"8"	"78"	"3343018.87841797"	"HCD"	"MS2"	"16.90751"	"201.1"	"100.000"	"40.3357"	"10956"	"10956"	"10925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.9"	""	"218.8"	""	"265.6"	""	"386.4"	""	"444.2"	"390.7"	""	"944"	"16"	"36.000"	"29.000"	"1.2132268094669"	"21"	"0.0001859"	"0.0003259"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.62607"	"1475.86365"	"1475.86224"	"0.96"	"0.00047"	"6/78"	"6"	"78"	"2027072698.23438"	"HCD"	"MS2"	"3.851155"	"331.7"	"0.633"	"39.8336"	"10710"	"10710"	"10693"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"521.9"	""	"503.5"	""	"482.2"	""	"437.2"	""	"635.9"	"563.5"	""	"938"	"33"	"36.000"	"29.000"	"0.0224994987410607"	"15"	"0.0008731"	"0.008583"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"492.62616"	"1475.86393"	"1475.86626"	"-1.58"	"-0.00078"	"8/56"	"8"	"56"	"4829874.01776123"	"HCD"	"MS2"	"33.05137"	"127.4"	"100.000"	"50.1328"	"14894"	"14894"	"14880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.0"	""	"181.3"	""	"154.8"	""	"223.0"	"5.5"	"244.2"	"201.5"	""	"936"	"29"	"36.000"	"29.000"	"0.0637156111394064"	"23"	"0.0003146"	"0.00141"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].sIHTLFGDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"492.62622"	"1475.86411"	"1475.86224"	"1.27"	"0.00062"	"8/78"	"8"	"78"	"1765821157.69531"	"HCD"	"MS2"	"4.129529"	"264.9"	"0.604"	"39.9478"	"10798"	"10798"	"10781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"407.0"	""	"380.7"	""	"385.6"	""	"371.6"	"0.9"	"511.9"	"451.0"	""	"938"	"36"	"36.000"	"29.000"	"0.0126815647276705"	"16"	"0.0006037"	"0.004339"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"738.43591"	"1475.86455"	"1475.86626"	"-1.16"	"-0.00085"	"7/56"	"7"	"56"	"6774585.84503174"	"HCD"	"MS2"	"0"	"363.6"	"100.000"	"50.4410"	"15068"	"15068"	"15048"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"572.1"	""	"539.4"	""	"398.2"	""	"605.3"	"4.0"	"684.5"	"641.5"	""	"936"	"38"	"36.000"	"29.000"	"0.00798446558053462"	"29"	"0.0001889"	"0.000675"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"738.43591"	"1475.86455"	"1475.86626"	"-1.16"	"-0.00085"	"7/56"	"7"	"56"	"6494679.6126709"	"HCD"	"MS2"	"0"	"343.7"	"100.000"	"50.1990"	"14920"	"14920"	"14904"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"518.3"	""	"531.1"	""	"386.4"	""	"560.3"	"6.7"	"675.8"	"579.0"	""	"936"	"36"	"36.000"	"29.000"	"0.010696602399797"	"28"	"0.0004166"	"0.002319"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"738.43597"	"1475.86467"	"1475.86626"	"-1.07"	"-0.00079"	"7/56"	"7"	"56"	"11304538.7489014"	"HCD"	"MS2"	"0"	"560.3"	"97.087"	"50.1362"	"14945"	"14945"	"14932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"884.1"	""	"831.7"	""	"627.9"	""	"928.1"	"7.0"	"1071.7"	"957.6"	""	"936"	"40"	"36.000"	"29.000"	"0.00488929062595334"	""	"0.0002277"	"0.001159"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"738.43610"	"1475.86492"	"1475.86626"	"-0.91"	"-0.00067"	"7/56"	"7"	"56"	"11183329.9805908"	"HCD"	"MS2"	"0"	"433.8"	"78.939"	"49.9102"	"14806"	"14806"	"14788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"664.3"	""	"664.1"	""	"482.0"	""	"725.7"	"9.4"	"820.9"	"743.2"	""	"936"	"40"	"36.000"	"29.000"	"0.00475604388263485"	""	"0.0001889"	"0.0009353"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"738.43616"	"1475.86504"	"1475.86626"	"-0.83"	"-0.00061"	"6/56"	"6"	"56"	"3821751.19152832"	"HCD"	"MS2"	"0"	"201.2"	"100.000"	"50.7455"	"15192"	"15192"	"15174"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.0"	""	"271.5"	""	"227.1"	""	"366.4"	""	"389.8"	"357.7"	""	"938"	"27"	"36.000"	"29.000"	"0.091658520475866"	"21"	"0.0005564"	"0.003481"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"738.43640"	"1475.86553"	"1475.86626"	"-0.50"	"-0.00037"	"7/56"	"7"	"56"	"35117944.184082"	"HCD"	"MS2"	"0"	"365.3"	"19.828"	"49.8590"	"14832"	"14832"	"14814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"557.1"	""	"543.4"	""	"394.4"	""	"617.8"	""	"713.3"	"637.8"	""	"998"	"40"	"36.000"	"29.000"	"0.00526139061299237"	""	"0.0006037"	"0.005987"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"492.62680"	"1475.86585"	"1475.86626"	"-0.28"	"-0.00014"	"8/56"	"8"	"56"	"25738200.2558594"	"HCD"	"MS2"	"21.3494"	"350.0"	"53.604"	"49.5105"	"14643"	"14643"	"14623"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"534.9"	""	"528.1"	""	"449.2"	""	"539.3"	""	"669.8"	"598.1"	""	"998"	"25"	"36.000"	"29.000"	"0.156350957643348"	"22"	"0.0004166"	"0.002526"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"738.43671"	"1475.86614"	"1475.86626"	"-0.08"	"-0.00006"	"7/56"	"7"	"56"	"14222978.2794189"	"HCD"	"MS2"	"10.67992"	"577.8"	"82.294"	"49.5594"	"14711"	"14711"	"14686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"950.8"	""	"857.4"	""	"647.8"	""	"988.1"	"3.0"	"1077.5"	"946.0"	""	"1002"	"39"	"36.000"	"30.000"	"0.00693166755864861"	"30"	"0.0001889"	"0.0008628"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"738.43683"	"1475.86638"	"1475.86626"	"0.08"	"0.00006"	"7/56"	"7"	"56"	"13008265.6516113"	"HCD"	"MS2"	"8.110579"	"643.2"	"100.000"	"49.2800"	"14553"	"14553"	"14527"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1046.3"	""	"978.8"	""	"706.6"	""	"1075.6"	"3.7"	"1188.6"	"1091.1"	""	"1002"	"40"	"36.000"	"30.000"	"0.00513851615051955"	""	"0.0001889"	"0.0007581"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"738.43695"	"1475.86662"	"1475.86626"	"0.25"	"0.00018"	"7/56"	"7"	"56"	"4040740.77081299"	"HCD"	"MS2"	"4.375656"	"201.6"	"100.000"	"50.5131"	"15047"	"15047"	"15026"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.6"	""	"297.0"	""	"220.7"	""	"338.8"	""	"394.9"	"370.2"	""	"993"	"37"	"36.000"	"29.000"	"0.00903481476299857"	"29"	"0.0004166"	"0.002207"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"492.62714"	"1475.86686"	"1475.86626"	"0.40"	"0.00020"	"8/56"	"8"	"56"	"27780435.7913208"	"HCD"	"MS2"	"21.8917"	"475.3"	"65.420"	"49.7361"	"14783"	"14783"	"14766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"719.7"	""	"723.1"	""	"623.8"	""	"748.7"	"1.7"	"880.9"	"802.3"	""	"993"	"28"	"36.000"	"29.000"	"0.0835447671321487"	"20"	"0.000523"	"0.002765"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEK"	"[K].vWVYPPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"738.43719"	"1475.86711"	"1475.86626"	"0.58"	"0.00043"	"7/56"	"7"	"56"	"37952589.1257324"	"HCD"	"MS2"	"0"	"402.1"	"20.729"	"49.5792"	"14672"	"14672"	"14655"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"635.5"	""	"606.2"	""	"438.7"	""	"680.8"	""	"757.0"	"691.6"	""	"993"	"31"	"36.000"	"29.000"	"0.0373180766880039"	"29"	"0.0008731"	"0.009621"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSASQDGK"	"[RK].lLVSASQDGk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"4"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P52287; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Gnb3 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"738.44495"	"1475.88262"	"1475.88336"	"-0.51"	"-0.00037"	"8/86"	"8"	"86"	"9825647.98791504"	"HCD"	"MS2"	"0"	"606.0"	"100.000"	"38.9206"	"10378"	"10378"	"10350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"643.2"	""	"697.5"	""	"654.0"	""	"1125.7"	"0.4"	"1314.5"	"1327.4"	""	"817"	"53"	"36.000"	"29.000"	"0.000203325599213895"	"23"	"0"	"6.73E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEAAAQSSK"	"[R].lLEAAAQSSk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"738.44537"	"1475.88347"	"1475.88336"	"0.07"	"0.00005"	"9/90"	"9"	"90"	"1750447.5760498"	"HCD"	"MS2"	"0"	"136.0"	"100.000"	"39.1302"	"10421"	"10421"	"10390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.5"	""	"186.6"	""	"184.1"	""	"203.6"	""	"273.8"	"276.7"	""	"783"	"45"	"35.000"	"28.000"	"0.00117417212618367"	""	"0"	"7.998E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEAAAQSSK"	"[R].lLEAAAQSSk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.0789"	"0.0000"	"1"	"1"	"1"	"738.44556"	"1475.88384"	"1475.88336"	"0.32"	"0.00024"	"9/90"	"9"	"90"	"1800037.31591797"	"HCD"	"MS2"	"0"	"145.8"	"100.000"	"39.2348"	"10507"	"10507"	"10478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.3"	""	"187.4"	""	"177.7"	""	"235.2"	""	"295.2"	"320.5"	""	"781"	"38"	"35.000"	"28.000"	"0.00661638911074682"	""	"0"	"5.55E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLRPHYGK"	"[K].fLRPHYGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"369.72733"	"1475.88747"	"1475.88872"	"-0.85"	"-0.00031"	"5/68"	"5"	"68"	"11008951.8400269"	"HCD"	"MS2"	"13.16492"	"567.0"	"100.000"	"30.0121"	"6737"	"6737"	"6713"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"844.1"	""	"816.5"	""	"907.7"	""	"853.7"	"6.6"	"981.8"	"954.2"	""	"771"	"8"	"35.000"	"28.000"	"6.56182104986254"	"13"	"0.0003839"	"0.001936"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLRPHYGK"	"[K].fLRPHYGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"369.72751"	"1475.88820"	"1475.88872"	"-0.35"	"-0.00013"	"5/68"	"5"	"68"	"10023498.7999268"	"HCD"	"MS2"	"7.372619"	"402.9"	"71.500"	"29.9611"	"6675"	"6675"	"6650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"595.5"	""	"614.2"	""	"628.5"	""	"595.4"	"9.1"	"697.1"	"672.8"	""	"700"	"10"	"35.000"	"28.000"	"3.61466492016489"	"13"	"0.0002277"	"0.001193"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDKGR"	"[K].iTITNDkGR.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"P63018; P0DMW0; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.63602"	"1475.89350"	"1475.89460"	"-0.75"	"-0.00037"	"7/80"	"7"	"80"	"7862587.21160889"	"HCD"	"MS2"	"46.92431"	"518.5"	"100.000"	"30.2344"	"6828"	"6828"	"6806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1014.4"	""	"784.5"	""	"791.1"	""	"775.8"	""	"765.1"	"764.7"	""	"666"	"3"	"35.000"	"28.000"	"16.3849165381923"	"13"	"0.0006037"	"0.004056"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFENWSASMI"	"[K].yFENWSASMI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"738.85437"	"1476.70146"	"1476.70307"	"-1.09"	"-0.00080"	"6/82"	"6"	"82"	"300695.45703125"	"HCD"	"MS2"	"14.51314"	"14.8"	"100.000"	"81.6939"	"27736"	"27736"	"27712"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.1"	""	"18.5"	""	"24.6"	""	"23.1"	"1.0"	"28.1"	"31.1"	""	"375"	"36"	"32.000"	"25.000"	"0.00426580768269763"	"15"	"0.00103"	"0.0115"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFENWSASMI"	"[K].yFENWSASMI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"738.85516"	"1476.70305"	"1476.70307"	"-0.01"	"-0.00001"	"7/82"	"7"	"82"	"321534.210449219"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"81.7167"	"27796"	"27796"	"27774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.4"	""	"19.6"	""	"20.0"	""	"20.9"	""	"28.1"	"27.2"	""	"380"	"34"	"32.000"	"25.000"	"0.00756403624051645"	"15"	"0.0006037"	"0.004246"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLGFCALIHR"	"[K].dGLGFcALIHR.[H]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.92560"	"1476.76224"	"1476.76529"	"-2.07"	"-0.00102"	"13/80"	"13"	"80"	"2375277.43469238"	"HCD"	"MS2"	"24.68831"	"44.3"	"100.000"	"61.4803"	"19504"	"19504"	"19481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.1"	""	"79.6"	""	"57.8"	""	"57.3"	""	"92.3"	"79.1"	""	"829"	"31"	"36.000"	"29.000"	"0.0340819578403061"	"14"	"0"	"0.0001413"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLGFCALIHR"	"[K].dGLGFcALIHR.[H]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"492.92560"	"1476.76224"	"1476.76529"	"-2.07"	"-0.00102"	"11/80"	"11"	"80"	"3065870.55493164"	"HCD"	"MS2"	"31.84183"	"46.9"	"100.000"	"61.6160"	"19613"	"19613"	"19587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.5"	""	"68.2"	""	"71.0"	""	"67.2"	""	"85.4"	"91.6"	""	"829"	"43"	"36.000"	"29.000"	"0.00191656933369993"	"20"	"0"	"5.93E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEYFFGK"	"[K].vEEYFFGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.94241"	"1476.81269"	"1476.81389"	"-0.81"	"-0.00040"	"4/58"	"4"	"58"	"2213241.4887085"	"HCD"	"MS2"	"48.66357"	"98.4"	"100.000"	"59.5469"	"18768"	"18768"	"18741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.9"	""	"142.6"	""	"150.5"	""	"151.3"	"18.2"	"151.0"	"164.7"	""	"1123"	"2"	"37.000"	"30.000"	"33.292756975167"	"13"	"0.0009404"	"0.01028"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEYFFGK"	"[K].vEEYFFGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"738.91052"	"1476.81377"	"1476.81389"	"-0.08"	"-0.00006"	"7/58"	"7"	"58"	"3457230.95800781"	"HCD"	"MS2"	"13.2657"	"288.9"	"100.000"	"59.2868"	"18608"	"18608"	"18585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"411.1"	""	"417.3"	""	"419.6"	""	"450.7"	""	"513.7"	"528.7"	""	"1143"	"37"	"37.000"	"30.000"	"0.0126478362653962"	"18"	"0.0001889"	"0.000468"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQADVLNVWR"	"[K].fQADVLNVWR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"492.94290"	"1476.81415"	"1476.81606"	"-1.30"	"-0.00064"	"13/88"	"13"	"88"	"2086735.128479"	"HCD"	"MS2"	"14.01722"	"34.9"	"100.000"	"64.9879"	"20990"	"20990"	"20963"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.5"	""	"32.7"	""	"40.8"	""	"68.2"	"2.4"	"72.6"	"79.1"	""	"1142"	"47"	"37.000"	"30.000"	"0.00120402667361191"	"24"	"0"	"4.871E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEYFFGK"	"[K].vEEYFFGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"738.91113"	"1476.81499"	"1476.81389"	"0.75"	"0.00055"	"7/58"	"7"	"58"	"3597024.2131958"	"HCD"	"MS2"	"17.89699"	"289.4"	"100.000"	"59.4200"	"18716"	"18716"	"18693"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"415.6"	""	"416.9"	""	"434.5"	""	"444.2"	""	"504.6"	"525.6"	""	"1142"	"37"	"37.000"	"30.000"	"0.0117661968047717"	"18"	"0.0001889"	"0.0007181"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQADVLNVWR"	"[K].fQADVLNVWR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"492.94339"	"1476.81562"	"1476.81606"	"-0.30"	"-0.00015"	"11/88"	"11"	"88"	"1814621.97705078"	"HCD"	"MS2"	"9.427032"	"29.6"	"100.000"	"64.9801"	"20934"	"20934"	"20905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.2"	"2.2"	"32.9"	""	"28.5"	""	"57.7"	""	"66.8"	"66.7"	""	"1111"	"40"	"37.000"	"30.000"	"0.00587062126368187"	"24"	"0"	"5.412E-05"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQADVLNVWR"	"[K].fQADVLNVWR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"738.91156"	"1476.81584"	"1476.81606"	"-0.15"	"-0.00011"	"7/88"	"7"	"88"	"5173926.89660645"	"HCD"	"MS2"	"16.71067"	"227.8"	"100.000"	"64.8887"	"20949"	"20949"	"20931"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.2"	""	"196.3"	""	"203.2"	""	"472.7"	"2.4"	"570.1"	"558.7"	""	"1112"	"54"	"37.000"	"30.000"	"0.000243823067962892"	"24"	"0"	"7.714E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQADVLNVWR"	"[K].fQADVLNVWR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"738.91193"	"1476.81658"	"1476.81606"	"0.35"	"0.00026"	"9/88"	"9"	"88"	"4903693.11480713"	"HCD"	"MS2"	"12.62278"	"223.6"	"100.000"	"64.9178"	"20908"	"20908"	"20889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.5"	""	"181.7"	""	"200.4"	""	"452.2"	""	"555.1"	"588.2"	""	"1099"	"53"	"37.000"	"30.000"	"0.000258802040855125"	"23"	"0"	"7.621E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMTKPDR"	"[R].sLAMTkPDR.[Q]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"492.95792"	"1476.85920"	"1476.86085"	"-1.12"	"-0.00055"	"6/84"	"6"	"84"	"10059952.9831543"	"HCD"	"MS2"	"15.18087"	"564.4"	"100.000"	"30.8051"	"7062"	"7062"	"7040"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"860.7"	""	"803.5"	""	"841.7"	""	"620.6"	"0.7"	"1106.3"	"1117.1"	""	"939"	"14"	"36.000"	"29.000"	"1.82236596832609"	"23"	"0.0001889"	"0.0004602"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMTKPDR"	"[R].sLAMTkPDR.[Q]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"492.95828"	"1476.86029"	"1476.86085"	"-0.38"	"-0.00019"	"7/84"	"7"	"84"	"11121003.6516113"	"HCD"	"MS2"	"24.25836"	"654.3"	"100.000"	"30.6950"	"6976"	"6976"	"6952"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"986.4"	""	"949.0"	""	"967.7"	""	"702.2"	""	"1272.9"	"1327.1"	""	"946"	"15"	"36.000"	"29.000"	"1.6325298870586"	"23"	"0.0001308"	"0.0002855"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVLESLNK"	"[R].sEVLESLNk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"492.95981"	"1476.86487"	"1476.86738"	"-1.70"	"-0.00084"	"9/76"	"9"	"76"	"14281627.3408813"	"HCD"	"MS2"	"17.6787"	"408.2"	"96.329"	"42.2258"	"11683"	"11683"	"11660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"611.6"	""	"612.2"	""	"477.3"	""	"706.4"	""	"753.1"	"707.7"	""	"912"	"36"	"36.000"	"29.000"	"0.0119389145174786"	"19"	"0.0006037"	"0.004154"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVLESLNK"	"[R].sEVLESLNk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"492.96024"	"1476.86615"	"1476.86738"	"-0.83"	"-0.00041"	"9/76"	"9"	"76"	"15772702.7039185"	"HCD"	"MS2"	"11.50801"	"433.2"	"100.000"	"42.5283"	"11851"	"11851"	"11827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"631.7"	""	"675.8"	""	"476.6"	""	"759.8"	""	"803.4"	"759.4"	""	"907"	"32"	"36.000"	"29.000"	"0.0315920124149234"	"15"	"0.0005564"	"0.003581"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVLESLNK"	"[R].sEVLESLNk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"738.93726"	"1476.86724"	"1476.86738"	"-0.10"	"-0.00007"	"8/76"	"8"	"76"	"7355098.54083252"	"HCD"	"MS2"	"0"	"543.4"	"100.000"	"42.5238"	"11849"	"11849"	"11827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"875.3"	""	"777.9"	""	"563.8"	""	"957.7"	"17.9"	"964.6"	"989.5"	""	"868"	"50"	"36.000"	"29.000"	"0.000403171411862492"	"21"	"7.476E-05"	"0.0001852"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVLESLNK"	"[R].sEVLESLNk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"738.93732"	"1476.86736"	"1476.86738"	"-0.02"	"-0.00001"	"8/76"	"8"	"76"	"7573473.66644287"	"HCD"	"MS2"	"0"	"580.8"	"100.000"	"42.2583"	"11696"	"11696"	"11676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"867.9"	""	"866.2"	""	"585.0"	""	"1040.2"	"18.0"	"1051.4"	"1075.4"	""	"868"	"42"	"36.000"	"29.000"	"0.00288064492554428"	"19"	"0.0001308"	"0.0002152"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGFPSTTPAK"	"[K].iGFPSTTPAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"738.94531"	"1476.88335"	"1476.88264"	"0.48"	"0.00036"	"8/76"	"8"	"76"	"1306787.84783936"	"HCD"	"MS2"	"100"	"106.3"	"100.000"	"42.2511"	"11738"	"11738"	"11721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.8"	""	"127.4"	""	"150.5"	""	"187.1"	""	"222.5"	"205.1"	""	"701"	"39"	"35.000"	"28.000"	"0.0045361564242822"	"20"	"0"	"0.0001755"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSASQDGK"	"[RK].lLVSASqDGk.[L]"	"N-Term(TMT6plex); Q7(Deamidated); K10(TMT6plex)"	"1"	"4"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P52287; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Gnb3 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"738.94696"	"1476.88664"	"1476.86738"	"13.04"	"0.00963"	"9/86"	"9"	"86"	"7119212.92675781"	"HCD"	"MS2"	"0"	"479.2"	"100.000"	"38.8139"	"10291"	"10291"	"10262"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"486.7"	""	"561.2"	""	"536.1"	""	"884.4"	""	"1066.6"	"1033.2"	""	"730"	"33"	"35.000"	"28.000"	"0.0201972789863744"	"20"	"0.0009727"	"0.01071"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PMILGYWNVR"	"[M].pMILGYWNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"739.41168"	"1477.81609"	"1477.81871"	"-1.77"	"-0.00131"	"8/78"	"8"	"78"	"1085440.58966064"	"HCD"	"MS2"	"19.70113"	"75.0"	"100.000"	"66.5384"	"21570"	"21570"	"21545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.0"	""	"101.1"	""	"110.7"	""	"85.8"	"4.1"	"150.3"	"153.6"	""	"1095"	"45"	"37.000"	"30.000"	"0.00175139507255604"	"25"	"0"	"3.5E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFTGYYGK"	"[K].aIFTGYYGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"739.42615"	"1477.84502"	"1477.84552"	"-0.34"	"-0.00025"	"8/64"	"8"	"64"	"2235663.95080566"	"HCD"	"MS2"	"0"	"201.3"	"100.000"	"48.9647"	"14424"	"14424"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"312.4"	""	"256.9"	""	"286.3"	""	"315.9"	"7.9"	"364.0"	"363.3"	""	"964"	"49"	"36.000"	"29.000"	"0.000576828936090092"	"26"	"0"	"0.000101"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFTGYYGK"	"[K].aIFTGYYGk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"739.42725"	"1477.84722"	"1477.84552"	"1.15"	"0.00085"	"8/64"	"8"	"64"	"2394841.30072021"	"HCD"	"MS2"	"0"	"207.0"	"100.000"	"49.2374"	"14583"	"14583"	"14558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"320.0"	""	"287.5"	""	"294.0"	""	"302.1"	"6.2"	"370.8"	"379.3"	""	"957"	"52"	"36.000"	"29.000"	"0.000298457118778338"	"25"	"0"	"0.000131"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADLSELLK"	"[K].mADLSELLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23711"	"Heme oxygenase 2 OS=Rattus norvegicus OX=10116 GN=Hmox2 PE=1 SV=1"	"P23711"	"Heme oxygenase 2 OS=Rattus norvegicus OX=10116 GN=Hmox2 PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"739.43896"	"1477.87065"	"1477.87002"	"0.43"	"0.00032"	"8/70"	"8"	"70"	"872128.456665039"	"HCD"	"MS2"	"20.28828"	"71.1"	"100.000"	"68.3546"	"22355"	"22355"	"22330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.2"	""	"88.7"	""	"109.3"	""	"80.4"	"0.8"	"151.0"	"160.3"	""	"799"	"46"	"36.000"	"29.000"	"0.000940842188916456"	""	"0"	"7.857E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIMVGSGGVGK"	"[K].vImVGSGGVGk.[S]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"1"	"2"	"P36860"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1"	"P36860; P63322"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1; Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.44415"	"1477.88103"	"1477.88126"	"-0.15"	"-0.00011"	"9/80"	"9"	"80"	"2280213.51831055"	"HCD"	"MS2"	"0"	"143.8"	"100.000"	"38.6479"	"10266"	"10266"	"10241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.7"	""	"152.6"	""	"162.3"	""	"379.9"	"0.7"	"258.5"	"281.7"	""	"704"	"45"	"35.000"	"28.000"	"0.0011709616275949"	"16"	"0.0001308"	"0.0002393"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIMVGSGGVGK"	"[K].vImVGSGGVGk.[S]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"1"	"2"	"P36860"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1"	"P36860; P63322"	"Ras-related protein Ral-B OS=Rattus norvegicus OX=10116 GN=Ralb PE=2 SV=1; Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"739.44489"	"1477.88249"	"1477.88126"	"0.84"	"0.00062"	"9/80"	"9"	"80"	"2017281.58789063"	"HCD"	"MS2"	"0"	"135.7"	"100.000"	"38.5436"	"10180"	"10180"	"10151"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.9"	""	"163.1"	""	"152.8"	""	"352.4"	"2.4"	"247.2"	"246.1"	""	"682"	"46"	"35.000"	"28.000"	"0.000909398804601824"	"16"	"0.0001889"	"0.000614"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTITEAPIK"	"[K].fTITEAPIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"493.30566"	"1477.90244"	"1477.90304"	"-0.40"	"-0.00020"	"8/70"	"8"	"70"	"3090453.87426758"	"HCD"	"MS2"	"45.91859"	"92.7"	"100.000"	"50.9109"	"15260"	"15260"	"15238"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.6"	""	"115.1"	""	"109.2"	""	"169.6"	""	"192.5"	"185.4"	""	"537"	"34"	"34.000"	"27.000"	"0.0115330530586372"	"19"	"0.0001889"	"0.0009466"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTITEAPIK"	"[K].fTITEAPIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"493.30597"	"1477.90335"	"1477.90304"	"0.21"	"0.00011"	"8/70"	"8"	"70"	"2917510.14868164"	"HCD"	"MS2"	"41.75156"	"95.1"	"100.000"	"50.7196"	"15132"	"15132"	"15106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.3"	""	"125.8"	""	"109.0"	""	"161.1"	""	"198.3"	"186.5"	""	"534"	"25"	"34.000"	"27.000"	"0.0913085111511603"	"15"	"0.0001889"	"0.0008443"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVGLFLQGGK"	"[R].tVGLFLQGGk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"739.46045"	"1477.91362"	"1477.91427"	"-0.44"	"-0.00032"	"8/78"	"8"	"78"	"2114171.89526367"	"HCD"	"MS2"	"8.144426"	"191.3"	"100.000"	"51.9739"	"15645"	"15645"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.1"	""	"233.5"	""	"263.1"	""	"326.0"	"9.4"	"361.1"	"393.6"	""	"412"	"50"	"33.000"	"26.000"	"0.000184020929649059"	""	"0"	"3.167E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVGLFLQGGK"	"[R].tVGLFLQGGk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"739.46179"	"1477.91631"	"1477.91427"	"1.38"	"0.00102"	"8/78"	"8"	"78"	"1796555.91619873"	"HCD"	"MS2"	"0"	"156.2"	"100.000"	"52.1303"	"15759"	"15759"	"15734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.9"	""	"188.5"	""	"204.3"	""	"265.6"	"5.3"	"300.9"	"322.6"	""	"407"	"51"	"33.000"	"26.000"	"0.00015544058195806"	""	"0"	"5.613E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLQTQVFK"	"[R].rLQTQVFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"493.31281"	"1477.92386"	"1477.92550"	"-1.11"	"-0.00055"	"7/70"	"7"	"70"	"18500509.4989014"	"HCD"	"MS2"	"10.9108"	"689.1"	"79.867"	"32.6937"	"7834"	"7834"	"7814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1011.3"	""	"1002.7"	""	"1040.6"	""	"1141.8"	"0.7"	"1162.8"	"1159.0"	""	"359"	"18"	"32.000"	"25.000"	"0.29721070844278"	"14"	"0.0001859"	"0.0003595"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLQTQVFK"	"[R].rLQTQVFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"493.31287"	"1477.92405"	"1477.92550"	"-0.99"	"-0.00049"	"7/70"	"7"	"70"	"16564130.8181152"	"HCD"	"MS2"	"9.208285"	"717.4"	"99.840"	"32.6046"	"7755"	"7755"	"7736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1043.1"	""	"1042.2"	""	"1136.0"	""	"1163.3"	""	"1238.2"	"1176.5"	""	"359"	"19"	"32.000"	"25.000"	"0.247778975496218"	"15"	"0.0001889"	"0.0004472"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGDGIVLCK"	"[K].aVGDGIVLck.[M]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"739.92706"	"1478.84685"	"1478.84751"	"-0.45"	"-0.00033"	"15/72"	"15"	"72"	"4263184.11804199"	"HCD"	"MS2"	"38.57022"	"335.0"	"100.000"	"56.9427"	"17709"	"17709"	"17685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"476.0"	""	"490.6"	""	"503.1"	""	"443.2"	""	"598.7"	"663.0"	""	"859"	"53"	"36.000"	"29.000"	"0.000206045516189458"	"26"	"0"	"4.908E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGDGIVLCK"	"[K].aVGDGIVLck.[M]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"739.92761"	"1478.84795"	"1478.84751"	"0.29"	"0.00022"	"15/72"	"15"	"72"	"4026369.22711182"	"HCD"	"MS2"	"40.73148"	"328.6"	"100.000"	"56.7354"	"17570"	"17570"	"17547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"471.8"	""	"478.4"	""	"496.4"	""	"443.0"	""	"580.0"	"651.8"	""	"897"	"53"	"36.000"	"29.000"	"0.000207855943501725"	"26"	"0"	"6.13E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGDGIVLCK"	"[K].aVGDGIVLck.[M]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"493.62088"	"1478.84809"	"1478.84751"	"0.39"	"0.00019"	"5/72"	"5"	"72"	"3109247.38830566"	"HCD"	"MS2"	"40.06833"	"125.1"	"100.000"	"56.7929"	"17594"	"17594"	"17563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.2"	""	"178.4"	""	"185.1"	""	"174.4"	""	"230.4"	"244.0"	""	"897"	"18"	"36.000"	"29.000"	"0.6962455739662"	"20"	"0.0004166"	"0.002182"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMEHIHK"	"[R].iLMEHIHk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"4"	"4"	"0.9524"	"0.0000"	"1"	"1"	"1"	"370.47763"	"1478.88869"	"1478.89176"	"-2.07"	"-0.00077"	"4/56"	"4"	"56"	"21933375.3575439"	"HCD"	"MS2"	"5.874421"	"382.4"	"59.219"	"34.1228"	"8366"	"8366"	"8353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"590.0"	""	"626.2"	""	"646.5"	""	"415.5"	"8.7"	"690.9"	"640.1"	""	"637"	"21"	"35.000"	"28.000"	"0.255923069916119"	"15"	"0.0008125"	"0.007718"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMEHIHK"	"[R].iLMEHIHk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"4"	"4"	"0.9524"	"0.0000"	"1"	"1"	"1"	"370.47778"	"1478.88930"	"1478.89176"	"-1.66"	"-0.00061"	"4/56"	"4"	"56"	"13446769.8861694"	"HCD"	"MS2"	"13.01915"	"387.3"	"100.000"	"34.1320"	"8414"	"8414"	"8401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"606.8"	""	"625.4"	""	"643.3"	""	"423.5"	"11.9"	"699.8"	"654.0"	""	"637"	"21"	"35.000"	"28.000"	"0.254747210219738"	"15"	"0.0005564"	"0.00362"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDFGLATVK"	"[K].iGDFGLATVk.[ST]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P11345; P14056"	"RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Raf1 PE=1 SV=1;Serine/threonine-protein kinase A-Raf OS=Rattus norvegicus OX=10116 GN=Araf PE=1 SV=1"	"P11345; P14056"	"RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Raf1 PE=1 SV=1; Serine/threonine-protein kinase A-Raf OS=Rattus norvegicus OX=10116 GN=Araf PE=1 SV=1"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"493.63760"	"1478.89826"	"1478.89829"	"-0.02"	"-0.00001"	"11/82"	"11"	"82"	"2089727.58087158"	"HCD"	"MS2"	"29.15413"	"103.2"	"100.000"	"57.5227"	"17892"	"17892"	"17867"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.3"	""	"116.2"	""	"131.5"	""	"168.6"	""	"225.4"	"224.0"	""	"534"	"29"	"34.000"	"27.000"	"0.0340025322631449"	"23"	"0.0001859"	"0.0003252"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDFGLATVK"	"[K].iGDFGLATVk.[ST]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P11345; P14056"	"RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Raf1 PE=1 SV=1;Serine/threonine-protein kinase A-Raf OS=Rattus norvegicus OX=10116 GN=Araf PE=1 SV=1"	"P11345; P14056"	"RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Raf1 PE=1 SV=1; Serine/threonine-protein kinase A-Raf OS=Rattus norvegicus OX=10116 GN=Araf PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"739.95319"	"1478.89910"	"1478.89829"	"0.55"	"0.00040"	"16/82"	"16"	"82"	"1961058.42938232"	"HCD"	"MS2"	"16.32594"	"158.2"	"100.000"	"57.5573"	"17906"	"17906"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.9"	""	"211.7"	""	"233.3"	""	"243.8"	"4.9"	"294.7"	"289.0"	""	"524"	"33"	"34.000"	"27.000"	"0.0145311936794972"	""	"0"	"0.0001054"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPSGSTSK"	"[K].kPSGSTSk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"493.64255"	"1478.91309"	"1478.91455"	"-0.99"	"-0.00049"	"5/78"	"5"	"78"	"4273935.5447998"	"HCD"	"MS2"	"12.28026"	"297.8"	"100.000"	"23.6312"	"4174"	"4174"	"4157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"402.8"	""	"418.2"	""	"446.4"	""	"500.2"	"2.5"	"623.2"	"428.1"	""	"431"	"5"	"33.000"	"26.000"	"7.07045356658771"	"13"	"7.476E-05"	"0.0001945"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPQNAFFSGR"	"[K].lNPQNAFFSGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"740.39575"	"1479.78423"	"1479.79058"	"-4.29"	"-0.00318"	"7/98"	"7"	"98"	"1574937.96429443"	"HCD"	"MS2"	"35.91691"	"129.8"	"100.000"	"46.4064"	"13425"	"13425"	"13404"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.6"	""	"196.3"	""	"195.0"	""	"190.7"	""	"212.8"	"229.1"	""	"977"	"37"	"36.000"	"29.000"	"0.010066177126324"	"28"	"0"	"0.0001227"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPQNAFFSGR"	"[K].lNPQNAFFSGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"740.39948"	"1479.79167"	"1479.79058"	"0.74"	"0.00055"	"10/98"	"10"	"98"	"1954371.40734863"	"HCD"	"MS2"	"38.40725"	"159.8"	"100.000"	"46.7873"	"13581"	"13581"	"13554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.9"	""	"236.2"	""	"244.6"	""	"216.0"	""	"289.4"	"281.7"	""	"985"	"28"	"36.000"	"29.000"	"0.0821119252181398"	"20"	"0"	"8.329E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPQNAFFSGR"	"[K].lNPQNAFFSGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"740.40021"	"1479.79314"	"1479.79058"	"1.73"	"0.00128"	"6/98"	"6"	"98"	"2110903.94586182"	"HCD"	"MS2"	"23.37586"	"174.0"	"100.000"	"46.2500"	"13313"	"13313"	"13288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.7"	""	"249.1"	""	"265.6"	""	"264.9"	""	"300.5"	"300.6"	""	"1003"	"23"	"37.000"	"30.000"	"0.274960897907808"	"26"	"0.0001308"	"0.0002726"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CQAGVLSGIK"	"[R].cQAGVLSGIk.[M]"	"N-Term(TMT6plex); C1(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"740.41235"	"1479.81743"	"1479.84276"	"-17.12"	"-0.01267"	"9/88"	"9"	"88"	"3869573.36804199"	"HCD"	"MS2"	"16.98561"	"265.8"	"100.000"	"49.1937"	"14565"	"14565"	"14542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"371.3"	""	"403.7"	""	"387.9"	""	"351.1"	""	"516.9"	"490.4"	""	"973"	"12"	"36.000"	"29.000"	"3.25149315897131"	"14"	"0.000523"	"0.002785"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CQAGVLSGIK"	"[R].cQAGVLSGIk.[M]"	"N-Term(TMT6plex); C1(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"740.41296"	"1479.81865"	"1479.84276"	"-16.29"	"-0.01206"	"9/88"	"9"	"88"	"3625075.91778564"	"HCD"	"MS2"	"21.77994"	"245.1"	"100.000"	"48.8911"	"14394"	"14394"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"340.0"	""	"342.4"	""	"354.7"	""	"331.5"	""	"490.4"	"470.5"	""	"1011"	"7"	"37.000"	"30.000"	"10.7825420359559"	"14"	"0.0006037"	"0.004666"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPQYIFNSR"	"[K].iLPQYIFNSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"740.43024"	"1479.85320"	"1479.85212"	"0.73"	"0.00054"	"6/84"	"6"	"84"	"2034840.04296875"	"HCD"	"MS2"	"18.60808"	"112.2"	"100.000"	"61.5264"	"19523"	"19523"	"19497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.2"	""	"127.2"	""	"152.3"	""	"197.9"	""	"227.2"	"227.1"	""	"840"	"22"	"36.000"	"29.000"	"0.251332869925334"	"17"	"0.00119"	"0.0156"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPQYIFNSR"	"[K].iLPQYIFNSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.43030"	"1479.85332"	"1479.85212"	"0.81"	"0.00060"	"9/84"	"9"	"84"	"2168271.16442871"	"HCD"	"MS2"	"28.99593"	"122.2"	"100.000"	"61.6830"	"19640"	"19640"	"19619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.0"	""	"145.6"	""	"156.6"	""	"229.0"	""	"231.5"	"243.9"	""	"840"	"25"	"36.000"	"29.000"	"0.136536664901882"	"14"	"0.0001889"	"0.000573"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INNFSADIK"	"[K].iNNFSADIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"740.43274"	"1479.85820"	"1479.85715"	"0.71"	"0.00053"	"8/82"	"8"	"82"	"12274713.703064"	"HCD"	"MS2"	"16.61028"	"886.7"	"91.615"	"44.3484"	"12590"	"12590"	"12572"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1278.0"	""	"1243.1"	""	"1339.8"	""	"1331.1"	"4.2"	"1523.3"	"1675.4"	""	"780"	"52"	"35.000"	"28.000"	"0.000266725542439757"	"22"	"0.0001308"	"0.0002344"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INNFSADIK"	"[K].iNNFSADIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"740.43329"	"1479.85930"	"1479.85715"	"1.45"	"0.00108"	"8/82"	"8"	"82"	"11172982.048584"	"HCD"	"MS2"	"25.225"	"903.5"	"100.000"	"44.0661"	"12425"	"12425"	"12406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1282.7"	""	"1220.0"	""	"1390.9"	""	"1373.6"	"0.2"	"1580.3"	"1707.9"	""	"780"	"56"	"35.000"	"28.000"	"0.000107910724171049"	"23"	"0.0001308"	"0.0002407"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGIITWHPTAR"	"[R].vGIITWHPTAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"3"	"3"	"0.9038"	"0.0000"	"1"	"1"	"1"	"493.95914"	"1479.86286"	"1479.86335"	"-0.33"	"-0.00016"	"9/88"	"9"	"88"	"17648531.4206543"	"HCD"	"MS2"	"22.79913"	"245.0"	"100.000"	"40.5979"	"11063"	"11063"	"11037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"309.5"	""	"316.5"	""	"338.9"	""	"422.9"	"1.1"	"469.1"	"465.3"	""	"761"	"52"	"35.000"	"28.000"	"0.000233536442965204"	"21"	"0"	"4.481E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGIITWHPTAR"	"[R].vGIITWHPTAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"493.95950"	"1479.86396"	"1479.86335"	"0.41"	"0.00020"	"9/88"	"9"	"88"	"19423072.8461914"	"HCD"	"MS2"	"22.85006"	"231.4"	"79.674"	"40.4444"	"10956"	"10956"	"10933"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"283.0"	""	"303.3"	""	"343.2"	""	"395.7"	""	"439.3"	"429.6"	""	"789"	"46"	"35.000"	"28.000"	"0.000901668727931607"	"20"	"0"	"2.765E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDK"	"[R].vVFIFGPDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"740.45062"	"1479.89397"	"1479.89756"	"-2.43"	"-0.00179"	"7/64"	"7"	"64"	"956192.167419434"	"HCD"	"MS2"	"0"	"76.1"	"100.000"	"67.1710"	"21827"	"21827"	"21810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.1"	""	"101.7"	""	"115.6"	""	"122.9"	"2.6"	"133.0"	"159.3"	""	"491"	"43"	"33.000"	"26.000"	"0.00115891476630212"	"19"	"7.476E-05"	"0.0002013"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDK"	"[R].vVFIFGPDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"493.96967"	"1479.89444"	"1479.89756"	"-2.10"	"-0.00104"	"11/64"	"11"	"64"	"10151177.9281616"	"HCD"	"MS2"	"8.469171"	"229.3"	"100.000"	"66.5538"	"21629"	"21629"	"21603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"276.4"	""	"293.6"	""	"336.3"	""	"410.8"	""	"420.0"	"436.4"	""	"489"	"42"	"33.000"	"26.000"	"0.00139726526666271"	"16"	"0.0001889"	"0.0007395"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDK"	"[R].vVFIFGPDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"740.45148"	"1479.89568"	"1479.89756"	"-1.27"	"-0.00094"	"8/64"	"8"	"64"	"15628552.9127197"	"HCD"	"MS2"	"0"	"497.0"	"53.920"	"66.8052"	"21732"	"21732"	"21715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"555.7"	""	"614.1"	""	"704.1"	""	"876.5"	"2.7"	"913.9"	"1048.1"	""	"490"	"50"	"33.000"	"26.000"	"0.000248980929753321"	"18"	"0.0001889"	"0.0009827"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDK"	"[R].vVFIFGPDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"493.97015"	"1479.89591"	"1479.89756"	"-1.11"	"-0.00055"	"11/64"	"11"	"64"	"4619903.94372559"	"HCD"	"MS2"	"5.93332"	"115.1"	"100.000"	"66.8561"	"21752"	"21752"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.4"	""	"154.0"	""	"163.1"	""	"216.2"	""	"196.3"	"223.9"	""	"490"	"39"	"33.000"	"26.000"	"0.0032297290094632"	"16"	"0.0001889"	"0.0007829"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDK"	"[R].vVFIFGPDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"740.45172"	"1479.89617"	"1479.89756"	"-0.94"	"-0.00070"	"11/64"	"11"	"64"	"1054476.06378174"	"HCD"	"MS2"	"0"	"71.1"	"100.000"	"67.1078"	"21851"	"21851"	"21833"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.5"	""	"91.2"	""	"112.3"	""	"125.8"	""	"140.8"	"131.9"	""	"492"	"28"	"33.000"	"26.000"	"0.0418730993065158"	"16"	"0.0001889"	"0.001056"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDK"	"[R].vVFIFGPDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"493.97049"	"1479.89692"	"1479.89756"	"-0.43"	"-0.00021"	"11/64"	"11"	"64"	"7783376.59039307"	"HCD"	"MS2"	"20.18164"	"183.9"	"100.000"	"66.6077"	"21598"	"21598"	"21577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"219.5"	""	"216.8"	""	"256.6"	""	"352.5"	""	"335.8"	"362.9"	""	"470"	"39"	"33.000"	"26.000"	"0.00298584914724007"	"16"	"0.0001889"	"0.0009089"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDK"	"[R].vVFIFGPDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"740.45215"	"1479.89702"	"1479.89756"	"-0.36"	"-0.00027"	"7/64"	"7"	"64"	"6796779.32189941"	"HCD"	"MS2"	"20.53329"	"419.2"	"100.000"	"66.5010"	"21607"	"21607"	"21587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"527.0"	""	"565.1"	""	"591.3"	""	"790.3"	"2.2"	"687.1"	"807.1"	""	"470"	"39"	"33.000"	"26.000"	"0.00278655655819283"	"21"	"0.0001889"	"0.0007818"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDK"	"[R].vVFIFGPDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"493.97070"	"1479.89756"	"1479.89756"	"0.00"	"0.00000"	"11/64"	"11"	"64"	"5494910.88922119"	"HCD"	"MS2"	"6.136608"	"137.9"	"100.000"	"66.9140"	"21723"	"21723"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.0"	""	"164.9"	""	"195.5"	""	"253.2"	""	"251.6"	"286.4"	""	"465"	"41"	"33.000"	"26.000"	"0.00206263772798826"	"15"	"0.0001889"	"0.0007494"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDK"	"[R].vVFIFGPDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"740.45245"	"1479.89763"	"1479.89756"	"0.05"	"0.00004"	"7/64"	"7"	"64"	"14835951.4492798"	"HCD"	"MS2"	"0.8464273"	"650.6"	"72.408"	"66.8704"	"21706"	"21706"	"21689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"712.9"	""	"768.0"	""	"926.3"	""	"1198.9"	"4.1"	"1184.2"	"1377.5"	""	"465"	"39"	"33.000"	"26.000"	"0.00263283084452267"	"21"	"0.0001889"	"0.001021"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDK"	"[R].vVFIFGPDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"740.45258"	"1479.89787"	"1479.89756"	"0.21"	"0.00016"	"7/64"	"7"	"64"	"6002781.39019775"	"HCD"	"MS2"	"7.543078"	"374.1"	"100.000"	"66.5664"	"21581"	"21581"	"21561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"463.3"	""	"503.0"	""	"511.8"	""	"688.8"	""	"647.1"	"734.9"	""	"463"	"39"	"33.000"	"26.000"	"0.00268256957949912"	"21"	"0.0001889"	"0.0009798"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PMTLGYWDIR"	"[M].pMTLGYWDIR.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"3"	"3"	"0.5806"	"0.0000"	"1"	"1"	"1"	"494.26471"	"1480.77958"	"1480.78199"	"-1.63"	"-0.00080"	"9/82"	"9"	"82"	"1492928.09631348"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"64.1328"	"20641"	"20641"	"20611"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.5"	""	"42.0"	""	"52.3"	""	"48.8"	""	"61.0"	"68.6"	""	"915"	"31"	"36.000"	"29.000"	"0.0393904641624455"	"27"	"0.000523"	"0.002831"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLLNSFMQLR"	"[R].gGLLNSFmQLR.[E]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.90802"	"1480.80876"	"1480.81435"	"-3.77"	"-0.00279"	"10/92"	"10"	"92"	"1716480.46459961"	"HCD"	"MS2"	"0"	"112.2"	"100.000"	"52.9998"	"16065"	"16065"	"16034"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.2"	""	"138.3"	""	"138.0"	""	"251.6"	""	"214.6"	"221.4"	""	"962"	"29"	"36.000"	"29.000"	"0.0632623144284467"	"14"	"0.0008125"	"0.007658"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWNYILEK"	"[R].gWNYILEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"740.93256"	"1480.85784"	"1480.85642"	"0.95"	"0.00071"	"5/66"	"5"	"66"	"4732577.4385376"	"HCD"	"MS2"	"15.097"	"420.2"	"100.000"	"57.5940"	"17921"	"17921"	"17899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"684.1"	""	"624.6"	""	"638.7"	""	"589.9"	""	"721.3"	"717.4"	""	"671"	"29"	"35.000"	"28.000"	"0.0416574349197254"	""	"0.0001889"	"0.0008908"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPVSMFEK"	"[R].wPVSMFEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"741.41284"	"1481.81841"	"1481.82268"	"-2.88"	"-0.00214"	"7/62"	"7"	"62"	"2936848.46801758"	"HCD"	"MS2"	"14.78637"	"227.2"	"100.000"	"65.7558"	"21303"	"21303"	"21283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"347.6"	""	"345.7"	""	"319.8"	""	"287.8"	"1.1"	"409.0"	"441.2"	""	"947"	"31"	"36.000"	"29.000"	"0.0376114419141947"	"18"	"0.0001889"	"0.0008566"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPVSMFEK"	"[R].wPVSMFEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"741.41351"	"1481.81975"	"1481.82268"	"-1.98"	"-0.00146"	"7/62"	"7"	"62"	"2760789.83197021"	"HCD"	"MS2"	"39.22262"	"223.8"	"100.000"	"65.8352"	"21283"	"21283"	"21257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.4"	""	"308.9"	""	"337.5"	""	"279.5"	"0.0"	"410.4"	"429.7"	""	"936"	"33"	"36.000"	"29.000"	"0.0250176120197783"	"18"	"0.0001889"	"0.000547"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPVSMFEK"	"[R].wPVSMFEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.41412"	"1481.82097"	"1481.82268"	"-1.15"	"-0.00085"	"7/62"	"7"	"62"	"1684682.43505859"	"HCD"	"MS2"	"15.71282"	"131.0"	"100.000"	"66.0695"	"21431"	"21431"	"21411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.2"	""	"196.3"	""	"198.1"	""	"156.2"	""	"224.2"	"267.8"	""	"890"	"27"	"36.000"	"29.000"	"0.0955784560988088"	"14"	"0.0001889"	"0.0005563"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPVSMFEK"	"[R].wPVSMFEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"741.41437"	"1481.82146"	"1481.82268"	"-0.82"	"-0.00061"	"6/62"	"6"	"62"	"1819230.09954834"	"HCD"	"MS2"	"18.48989"	"142.5"	"100.000"	"65.4513"	"21179"	"21179"	"21155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.6"	""	"206.3"	""	"206.8"	""	"173.2"	"1.1"	"261.0"	"269.0"	""	"889"	"39"	"36.000"	"29.000"	"0.00590026836460869"	"19"	"0.0001889"	"0.0005602"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPVSMFEK"	"[R].wPVSMFEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"494.61270"	"1481.82355"	"1481.82268"	"0.59"	"0.00029"	"5/62"	"5"	"62"	"838020.20690918"	"HCD"	"MS2"	"42.22119"	"37.9"	"100.000"	"65.9638"	"21336"	"21336"	"21305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.8"	""	"57.5"	""	"54.3"	""	"53.8"	"0.5"	"64.1"	"76.9"	""	"886"	"14"	"36.000"	"29.000"	"1.79640281203634"	"14"	"0.000523"	"0.003056"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].FLASVSTVLTSk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9596"	"0.0000"	"1"	"1"	"1"	"741.44177"	"1481.87627"	"1481.87766"	"-0.94"	"-0.00070"	"10/102"	"10"	"102"	"1925850.67022705"	"HCD"	"MS2"	"10.48783"	"101.2"	"100.000"	"51.7278"	"15544"	"15544"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.4"	""	"115.7"	""	"124.2"	""	"180.6"	"3.2"	"206.9"	"223.4"	""	"597"	"99"	"34.000"	"27.000"	"3.92594612409383E-09"	"23"	"0"	"0.0001029"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].FLASVSTVLTSk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6915"	"0.0000"	"1"	"1"	"1"	"741.44183"	"1481.87639"	"1481.87766"	"-0.86"	"-0.00064"	"10/102"	"10"	"102"	"10229310.3137817"	"HCD"	"MS2"	"3.682898"	"449.1"	"100.000"	"51.4010"	"15411"	"15411"	"15394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"489.0"	""	"569.3"	""	"576.8"	""	"806.3"	"0.8"	"878.7"	"942.2"	""	"597"	"94"	"34.000"	"27.000"	"1.23294679344063E-08"	""	"0.0001859"	"0.0003381"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].FLASVSTVLTSk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.44196"	"1481.87663"	"1481.87766"	"-0.69"	"-0.00051"	"5/102"	"5"	"102"	"88151.3379516602"	"HCD"	"MS2"	"38.7838"	"6.1"	"100.000"	"86.1671"	"29552"	"29552"	"29526"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.9"	""	"7.3"	""	"7.7"	""	"12.1"	""	"10.7"	"13.4"	""	"597"	"29"	"34.000"	"27.000"	"0.0381016984430186"	"14"	"0.001454"	"0.02014"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].FLASVSTVLTSk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9596"	"0.0000"	"1"	"1"	"1"	"741.44208"	"1481.87688"	"1481.87766"	"-0.53"	"-0.00039"	"10/102"	"10"	"102"	"2368543.69042969"	"HCD"	"MS2"	"0"	"121.5"	"100.000"	"51.8890"	"15660"	"15660"	"15638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.5"	""	"142.4"	""	"155.6"	""	"207.0"	"1.6"	"253.5"	"262.0"	""	"596"	"99"	"34.000"	"27.000"	"4.00143958419084E-09"	"23"	"0.0001859"	"0.0003263"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSK.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9867"	"0.0000"	"1"	"1"	"1"	"741.44232"	"1481.87737"	"1481.87766"	"-0.20"	"-0.00015"	"9/102"	"9"	"102"	"1541474.62713623"	"HCD"	"MS2"	"20.98553"	"57.9"	"100.000"	"64.5547"	"20813"	"20813"	"20787"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.2"	""	"76.7"	""	"71.3"	""	"106.6"	"0.7"	"109.9"	"126.1"	""	"584"	"75"	"34.000"	"27.000"	"9.04446435371241E-07"	"18"	"0"	"1.727E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].FLASVSTVLTSk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"741.44299"	"1481.87871"	"1481.87766"	"0.71"	"0.00052"	"10/102"	"10"	"102"	"10335913.4931641"	"HCD"	"MS2"	"11.26996"	"474.9"	"100.000"	"51.5754"	"15532"	"15532"	"15510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"513.2"	""	"621.7"	""	"631.0"	""	"793.3"	"4.6"	"914.9"	"1029.7"	""	"584"	"98"	"34.000"	"27.000"	"4.24994051529934E-09"	""	"0.0001889"	"0.000778"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSK.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9861"	"0.0000"	"1"	"1"	"1"	"741.44312"	"1481.87895"	"1481.87766"	"0.87"	"0.00065"	"9/102"	"9"	"102"	"1384075.8861084"	"HCD"	"MS2"	"10.6999"	"51.9"	"100.000"	"64.5399"	"20754"	"20754"	"20729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.2"	""	"62.9"	""	"63.6"	""	"99.2"	"2.0"	"99.1"	"110.2"	""	"584"	"72"	"34.000"	"27.000"	"1.95606305949626E-06"	"18"	"0"	"0.0001169"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVHGGLINK"	"[K].eGVHGGLINk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"494.63269"	"1481.88352"	"1481.88403"	"-0.35"	"-0.00017"	"14/74"	"14"	"74"	"18186833.9281006"	"HCD"	"MS2"	"31.75214"	"622.7"	"100.000"	"30.3031"	"6856"	"6856"	"6838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"956.4"	""	"858.3"	""	"849.0"	""	"959.3"	"7.9"	"1142.0"	"1124.9"	""	"570"	"30"	"34.000"	"27.000"	"0.0302583233801637"	"14"	"0"	"2.434E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVHGGLINK"	"[K].eGVHGGLINk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"494.63306"	"1481.88462"	"1481.88403"	"0.39"	"0.00019"	"15/74"	"15"	"74"	"18502738.5"	"HCD"	"MS2"	"44.30259"	"615.9"	"100.000"	"30.2341"	"6787"	"6787"	"6762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"937.3"	""	"847.4"	""	"854.9"	""	"976.6"	"10.4"	"1111.5"	"1093.9"	""	"565"	"30"	"34.000"	"27.000"	"0.0291755097127595"	"14"	"0"	"3.135E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].FLASVSTVLTSk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"741.45215"	"1481.89702"	"1481.87766"	"13.06"	"0.00968"	"9/102"	"9"	"102"	"9527900.01177979"	"HCD"	"MS2"	"8.731346"	"489.9"	"100.000"	"51.3455"	"15388"	"15388"	"15362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"600.8"	""	"645.1"	""	"678.6"	""	"785.4"	"1.4"	"941.5"	"994.6"	""	"444"	"76"	"33.000"	"26.000"	"6.11438772141074E-07"	""	"0.00119"	"0.01552"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].FLASVSTVLTSk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.2600"	"0.0000"	"1"	"1"	"1"	"741.45520"	"1481.90312"	"1481.87766"	"17.18"	"0.01273"	"10/102"	"10"	"102"	"7952833.74377441"	"HCD"	"MS2"	"16.87256"	"482.3"	"100.000"	"51.4996"	"15501"	"15501"	"15478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"624.2"	""	"668.3"	""	"671.3"	""	"761.8"	"0.3"	"886.4"	"959.8"	""	"389"	"50"	"32.000"	"25.000"	"0.000176571093119657"	""	"0.005792"	"0.1869"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEELNADLFR"	"[R].fEELNADLFR.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"741.89355"	"1482.77983"	"1482.77901"	"0.55"	"0.00041"	"8/92"	"8"	"92"	"1492846.82427979"	"HCD"	"MS2"	"9.095378"	"97.9"	"100.000"	"64.3301"	"20668"	"20668"	"20649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.4"	""	"125.6"	""	"136.8"	""	"148.0"	""	"201.5"	"196.1"	""	"827"	"32"	"36.000"	"29.000"	"0.0252624527298454"	"19"	"0"	"8.656E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTPSQIGVILR"	"[K].gLTPSQIGVILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"741.96375"	"1482.92021"	"1482.92053"	"-0.21"	"-0.00016"	"14/104"	"14"	"104"	"5087498.50323486"	"HCD"	"MS2"	"8.344124"	"223.4"	"100.000"	"57.2344"	"17774"	"17774"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"275.8"	""	"311.4"	""	"302.3"	""	"375.8"	"1.5"	"444.8"	"407.6"	""	"296"	"53"	"31.000"	"24.000"	"7.7492864614691E-05"	"21"	"0"	"0.0001461"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTPSQIGVILR"	"[K].gLTPSQIGVILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"741.96393"	"1482.92058"	"1482.92053"	"0.03"	"0.00003"	"14/104"	"14"	"104"	"5767216.10412598"	"HCD"	"MS2"	"0"	"236.1"	"100.000"	"57.4403"	"17912"	"17912"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.9"	""	"306.8"	""	"336.4"	""	"419.9"	"2.8"	"461.4"	"422.7"	""	"296"	"53"	"31.000"	"24.000"	"7.53809689164649E-05"	"23"	"0"	"0.0001767"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTNLMDFLSR"	"[R].tGTNLMDFLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04638"	"Apolipoprotein A-II OS=Rattus norvegicus OX=10116 GN=Apoa2 PE=2 SV=1"	"P04638"	"Apolipoprotein A-II OS=Rattus norvegicus OX=10116 GN=Apoa2 PE=2 SV=1"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"742.39099"	"1483.77471"	"1483.77763"	"-1.97"	"-0.00146"	"10/112"	"10"	"112"	"2310477.00793457"	"HCD"	"MS2"	"14.69286"	"126.7"	"100.000"	"62.9373"	"20152"	"20152"	"20131"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.9"	""	"190.4"	""	"155.3"	""	"133.2"	""	"261.0"	"265.9"	""	"845"	"53"	"36.000"	"29.000"	"0.000231647017679061"	"23"	"0"	"1.346E-05"	"1.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTNLMDFLSR"	"[R].tGTNLMDFLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04638"	"Apolipoprotein A-II OS=Rattus norvegicus OX=10116 GN=Apoa2 PE=2 SV=1"	"P04638"	"Apolipoprotein A-II OS=Rattus norvegicus OX=10116 GN=Apoa2 PE=2 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"742.39313"	"1483.77898"	"1483.77763"	"0.91"	"0.00067"	"10/112"	"10"	"112"	"2023775.33807373"	"HCD"	"MS2"	"19.15616"	"127.6"	"100.000"	"62.8418"	"20060"	"20060"	"20041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.6"	""	"192.0"	""	"154.5"	""	"137.5"	""	"264.3"	"281.3"	""	"863"	"57"	"36.000"	"29.000"	"9.26788849587325E-05"	"23"	"0"	"1.719E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTDLFDTK"	"[K].wTDLFDTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"742.41357"	"1483.81987"	"1483.81970"	"0.11"	"0.00009"	"7/66"	"7"	"66"	"3303102.63677979"	"HCD"	"MS2"	"50.53152"	"280.8"	"100.000"	"66.2178"	"21439"	"21439"	"21417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"410.6"	""	"365.2"	""	"378.4"	""	"463.4"	""	"516.6"	"528.0"	""	"862"	"38"	"36.000"	"29.000"	"0.0074899215719098"	"23"	"0.0001889"	"0.0004544"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFIMAEVMK"	"[K].gFIMAEVMk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"742.42371"	"1483.84014"	"1483.84170"	"-1.05"	"-0.00078"	"8/64"	"8"	"64"	"2832051.60717773"	"HCD"	"MS2"	"10.46964"	"181.7"	"100.000"	"60.6226"	"19207"	"19207"	"19187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"257.6"	""	"245.3"	""	"273.0"	""	"266.5"	"1.7"	"326.7"	"350.3"	""	"764"	"32"	"35.000"	"28.000"	"0.0239918293066687"	"21"	"0.0001308"	"0.0002644"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFIMAEVMK"	"[K].gFIMAEVMk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"742.42407"	"1483.84087"	"1483.84170"	"-0.56"	"-0.00042"	"8/64"	"8"	"64"	"3195833.94219971"	"HCD"	"MS2"	"21.59135"	"308.3"	"100.000"	"60.4196"	"19071"	"19071"	"19049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"444.6"	""	"454.2"	""	"466.8"	""	"398.9"	""	"566.0"	"592.6"	""	"745"	"51"	"35.000"	"28.000"	"0.000304176933331075"	"25"	"0"	"0.0001831"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPTDFLAK"	"[R].fSPTDFLAk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"742.43060"	"1483.85393"	"1483.85609"	"-1.45"	"-0.00108"	"8/70"	"8"	"70"	"2574379.03161621"	"HCD"	"MS2"	"0"	"208.8"	"100.000"	"63.5565"	"20405"	"20405"	"20387"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.1"	""	"256.3"	""	"275.2"	""	"345.7"	"8.1"	"396.5"	"394.0"	""	"676"	"45"	"35.000"	"28.000"	"0.00117197055452956"	"24"	"0.0001308"	"0.0002371"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPTDFLAK"	"[R].fSPTDFLAk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"742.43164"	"1483.85600"	"1483.85609"	"-0.06"	"-0.00004"	"8/70"	"8"	"70"	"2532215.65319824"	"HCD"	"MS2"	"20.51326"	"208.6"	"100.000"	"63.4845"	"20323"	"20323"	"20297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.7"	""	"260.8"	""	"265.7"	""	"342.9"	"6.7"	"380.0"	"405.2"	""	"675"	"33"	"35.000"	"28.000"	"0.0185470044926948"	"23"	"7.476E-05"	"0.0001896"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPISTMIK"	"[R].vHPISTMIk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"495.30710"	"1483.90674"	"1483.90708"	"-0.23"	"-0.00011"	"13/66"	"13"	"66"	"94322151.9140625"	"HCD"	"MS2"	"20.4593"	"898.0"	"33.515"	"35.5654"	"8957"	"8957"	"8939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1559.0"	""	"1368.8"	""	"1442.4"	""	"897.1"	"0.5"	"1521.4"	"1705.2"	""	"348"	"36"	"32.000"	"25.000"	"0.00427119351329195"	"23"	"0.0001859"	"0.0003191"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPISTMIK"	"[R].vHPISTMIk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"495.30710"	"1483.90674"	"1483.90708"	"-0.23"	"-0.00011"	"7/66"	"7"	"66"	"75524760.4261475"	"HCD"	"MS2"	"31.29879"	"948.1"	"42.387"	"35.6138"	"9020"	"9020"	"9001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1635.8"	""	"1430.5"	""	"1513.7"	""	"975.7"	"1.4"	"1625.3"	"1787.4"	""	"348"	"29"	"32.000"	"25.000"	"0.0202557929117426"	"16"	"0.0001889"	"0.0004131"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPISTMIK"	"[R].vHPISTMIk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"742.45740"	"1483.90752"	"1483.90708"	"0.30"	"0.00022"	"8/66"	"8"	"66"	"3115437.87744141"	"HCD"	"MS2"	"0"	"174.8"	"100.000"	"35.5931"	"8969"	"8969"	"8939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.5"	""	"277.5"	""	"265.0"	""	"162.1"	""	"291.1"	"342.8"	""	"347"	"42"	"32.000"	"25.000"	"0.00119756605966282"	"18"	"0.0001308"	"0.0002246"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPISTMIK"	"[R].vHPISTMIk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"742.45758"	"1483.90788"	"1483.90708"	"0.54"	"0.00040"	"8/66"	"8"	"66"	"3404790.33068848"	"HCD"	"MS2"	"0"	"180.5"	"100.000"	"35.6688"	"9043"	"9043"	"9017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"316.8"	""	"264.8"	""	"297.5"	""	"173.2"	"2.4"	"311.8"	"341.4"	""	"347"	"43"	"32.000"	"25.000"	"0.000953453416142979"	"18"	"0.0001308"	"0.0002802"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGIVSAPVPK"	"[R].gTGIVSAPVPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"742.46576"	"1483.92424"	"1483.92484"	"-0.40"	"-0.00030"	"8/88"	"8"	"88"	"3125810.41583252"	"HCD"	"MS2"	"0"	"188.8"	"100.000"	"38.1121"	"10046"	"10046"	"10017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.5"	""	"265.4"	""	"312.5"	""	"286.4"	"2.2"	"337.5"	"316.6"	""	"276"	"51"	"31.000"	"24.000"	"0.000103963067795253"	"23"	"0"	"1.829E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGIVSAPVPK"	"[R].gTGIVSAPVPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"742.46576"	"1483.92424"	"1483.92484"	"-0.40"	"-0.00030"	"9/88"	"9"	"88"	"4004776.73175049"	"HCD"	"MS2"	"13.60227"	"234.9"	"100.000"	"37.9868"	"9951"	"9951"	"9927"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"327.0"	""	"334.2"	""	"368.7"	""	"354.7"	"3.1"	"442.0"	"394.8"	""	"276"	"63"	"31.000"	"24.000"	"7.20906740818785E-06"	""	"0"	"1.755E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INMCGLTTK"	"[R].iNMcGLTTk.[N]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"742.90631"	"1484.80535"	"1484.80393"	"0.95"	"0.00071"	"13/80"	"13"	"80"	"1414496.52172852"	"HCD"	"MS2"	"53.37033"	"149.6"	"100.000"	"56.7514"	"17577"	"17577"	"17547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.1"	""	"195.2"	""	"225.7"	""	"217.8"	"1.6"	"272.1"	"284.7"	""	"833"	"30"	"36.000"	"29.000"	"0.0395926896557841"	"17"	"0"	"0.0001595"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"742.92120"	"1484.83513"	"1484.83608"	"-0.64"	"-0.00047"	"15/86"	"15"	"86"	"1786746.46075439"	"HCD"	"MS2"	"0"	"147.5"	"100.000"	"35.9873"	"9174"	"9174"	"9145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.3"	""	"185.7"	""	"223.3"	""	"238.6"	"1.1"	"249.6"	"240.9"	""	"788"	"53"	"35.000"	"28.000"	"0.000176399041845487"	"25"	"0"	"2.859E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"742.92169"	"1484.83611"	"1484.83608"	"0.02"	"0.00001"	"15/86"	"15"	"86"	"2240137.05517578"	"HCD"	"MS2"	"0"	"180.8"	"100.000"	"35.9003"	"9095"	"9095"	"9067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"311.5"	""	"226.4"	""	"272.1"	""	"302.0"	"0.6"	"296.6"	"300.2"	""	"772"	"54"	"35.000"	"28.000"	"0.000169663063559"	"25"	"0"	"3.673E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSYLSQTK"	"[R].lSSYLSQTk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"742.93860"	"1484.86992"	"1484.87247"	"-1.71"	"-0.00127"	"16/80"	"16"	"80"	"4619435.36029053"	"HCD"	"MS2"	"0"	"386.3"	"100.000"	"42.5933"	"11834"	"11834"	"11804"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"680.2"	""	"513.8"	""	"424.2"	""	"727.1"	""	"697.4"	"613.1"	""	"619"	"58"	"34.000"	"27.000"	"5.12460803693818E-05"	"22"	"0"	"0.0001356"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSYLSQTK"	"[R].lSSYLSQTk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"495.62823"	"1484.87015"	"1484.87247"	"-1.56"	"-0.00077"	"10/80"	"10"	"80"	"5484253.41522217"	"HCD"	"MS2"	"25.27141"	"227.3"	"100.000"	"42.6347"	"11851"	"11851"	"11820"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"346.1"	""	"324.6"	""	"285.3"	""	"392.5"	"0.6"	"418.2"	"384.9"	""	"646"	"13"	"35.000"	"28.000"	"1.81218496258488"	"16"	"0.001846"	"0.02538"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSYLSQTK"	"[R].lSSYLSQTk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"742.93945"	"1484.87163"	"1484.87247"	"-0.56"	"-0.00042"	"16/80"	"16"	"80"	"5063590.70489502"	"HCD"	"MS2"	"0"	"404.7"	"100.000"	"42.8543"	"11985"	"11985"	"11955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"706.8"	""	"562.1"	""	"455.2"	""	"772.9"	"4.5"	"708.1"	"618.4"	""	"641"	"58"	"35.000"	"28.000"	"5.31897603833739E-05"	"20"	"0"	"0.0001363"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFDEYLK"	"[R].lVFDEYLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"742.94086"	"1484.87444"	"1484.87649"	"-1.38"	"-0.00103"	"6/58"	"6"	"58"	"17285923.7769775"	"HCD"	"MS2"	"0.570007"	"477.5"	"36.020"	"63.9440"	"20564"	"20564"	"20547"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"672.9"	""	"660.0"	""	"739.3"	""	"738.4"	""	"819.1"	"892.4"	""	"610"	"43"	"34.000"	"27.000"	"0.00157870083744923"	"25"	"0.0003839"	"0.00192"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFDEYLK"	"[R].lVFDEYLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"742.94128"	"1484.87529"	"1484.87649"	"-0.81"	"-0.00060"	"6/58"	"6"	"58"	"10704074.4268799"	"HCD"	"MS2"	"0"	"439.7"	"49.964"	"63.9317"	"20506"	"20506"	"20489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"616.6"	""	"634.9"	""	"657.7"	""	"674.3"	"2.7"	"741.4"	"835.1"	""	"612"	"43"	"34.000"	"27.000"	"0.00161332337595384"	"25"	"0.0002277"	"0.001187"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIYDFIEK"	"[K].vIYDFIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"742.94135"	"1484.87541"	"1484.87649"	"-0.72"	"-0.00054"	"7/62"	"7"	"62"	"1422267.19104004"	"HCD"	"MS2"	"28.95374"	"126.1"	"100.000"	"65.4005"	"21158"	"21158"	"21139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.9"	""	"181.2"	"2.9"	"182.7"	""	"184.4"	"0.6"	"241.6"	"234.7"	""	"596"	"39"	"34.000"	"27.000"	"0.00407583190027563"	"20"	"0.0001308"	"0.0002559"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIDLAALGITGR"	"[K].gVIDLAALGITGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"742.94135"	"1484.87541"	"1484.89979"	"-16.42"	"-0.01219"	"9/110"	"9"	"110"	"1076719.91723633"	"HCD"	"MS2"	"54.05828"	"66.0"	"100.000"	"69.5414"	"22840"	"22840"	"22810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.3"	""	"81.4"	""	"78.0"	""	"103.7"	"2.2"	"148.1"	"128.2"	""	"596"	"39"	"34.000"	"27.000"	"0.00384783343536833"	"15"	"0"	"4.692E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFDEYLK"	"[R].lVFDEYLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"495.63004"	"1484.87555"	"1484.87649"	"-0.63"	"-0.00031"	"6/58"	"6"	"58"	"5741585.37219238"	"HCD"	"MS2"	"17.91755"	"175.5"	"100.000"	"63.6643"	"20396"	"20396"	"20377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.4"	""	"275.7"	""	"259.5"	""	"274.2"	"4.1"	"294.4"	"308.8"	""	"598"	"30"	"34.000"	"27.000"	"0.02790430359383"	"23"	"0.0006037"	"0.005036"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFDEYLK"	"[R].lVFDEYLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"742.94165"	"1484.87602"	"1484.87649"	"-0.31"	"-0.00023"	"6/58"	"6"	"58"	"13814232.0458374"	"HCD"	"MS2"	"2.079644"	"1061.7"	"96.394"	"63.6184"	"20378"	"20378"	"20361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1568.5"	""	"1589.8"	""	"1580.6"	""	"1709.7"	"0.3"	"1722.3"	"1871.8"	""	"597"	"42"	"34.000"	"27.000"	"0.00170194035275803"	"25"	"0.0003146"	"0.001437"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFDEYLK"	"[R].lVFDEYLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"495.63095"	"1484.87830"	"1484.87649"	"1.22"	"0.00060"	"6/58"	"6"	"58"	"7140001.35803223"	"HCD"	"MS2"	"23.72742"	"222.3"	"100.000"	"63.7319"	"20477"	"20477"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.0"	""	"337.8"	""	"324.7"	""	"346.5"	""	"386.1"	"386.8"	""	"563"	"26"	"34.000"	"27.000"	"0.0644879244254128"	"16"	"0.0006037"	"0.005358"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFDEYLK"	"[R].lVFDEYLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"742.94324"	"1484.87920"	"1484.87649"	"1.82"	"0.00135"	"6/58"	"6"	"58"	"8913921.88391113"	"HCD"	"MS2"	"10.35799"	"729.8"	"100.000"	"63.6372"	"20438"	"20438"	"20419"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1100.8"	""	"1083.1"	""	"1076.4"	""	"1136.4"	""	"1221.7"	"1290.8"	""	"558"	"39"	"34.000"	"27.000"	"0.00327042506987928"	"23"	"0.0003839"	"0.001683"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIDLAALGITGR"	"[K].gVIDLAALGITGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"0"	"2"	"2"	"0.9870"	"0.0000"	"1"	"1"	"1"	"742.95233"	"1484.89739"	"1484.89979"	"-1.62"	"-0.00120"	"10/110"	"10"	"110"	"1111549.62536621"	"HCD"	"MS2"	"27.10253"	"64.9"	"100.000"	"69.8005"	"22894"	"22894"	"22869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.8"	""	"87.7"	""	"85.1"	""	"112.9"	"0.8"	"112.8"	"127.9"	""	"446"	"77"	"33.000"	"26.000"	"4.1620267105613E-07"	"19"	"0"	"1.469E-06"	"1.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIDLAALGITGR"	"[K].gVIDLAALGITGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"742.95245"	"1484.89763"	"1484.89979"	"-1.46"	"-0.00108"	"20/110"	"20"	"110"	"1062696.08233643"	"HCD"	"MS2"	"41.01252"	"63.4"	"100.000"	"69.6720"	"22893"	"22893"	"22873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.8"	""	"87.9"	""	"94.6"	""	"101.6"	""	"125.5"	"125.4"	""	"447"	"39"	"33.000"	"26.000"	"0.00256022142413077"	"20"	"0"	"7.211E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGPLLISLK"	"[R].dAGPLLISLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"742.97528"	"1484.94328"	"1484.94524"	"-1.31"	"-0.00098"	"8/86"	"8"	"86"	"860115.860778809"	"HCD"	"MS2"	"0"	"78.5"	"100.000"	"61.5882"	"19602"	"19602"	"19571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.7"	""	"99.6"	""	"107.9"	""	"125.8"	""	"151.3"	"136.8"	""	"224"	"38"	"30.000"	"23.000"	"0.00182481155655649"	"17"	"0.0001859"	"0.0003509"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGPLLISLK"	"[R].dAGPLLISLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"742.97546"	"1484.94365"	"1484.94524"	"-1.07"	"-0.00079"	"16/86"	"16"	"86"	"3853770.02929688"	"HCD"	"MS2"	"49.41017"	"262.9"	"100.000"	"60.9475"	"19340"	"19340"	"19315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"466.7"	""	"334.0"	""	"344.5"	""	"437.6"	"4.4"	"431.8"	"467.7"	""	"222"	"44"	"30.000"	"23.000"	"0.000495818787287569"	"19"	"0"	"0.0001507"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGPLLISLK"	"[R].dAGPLLISLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"742.97577"	"1484.94426"	"1484.94524"	"-0.66"	"-0.00049"	"15/86"	"15"	"86"	"10851340.9596558"	"HCD"	"MS2"	"1.300689"	"609.9"	"89.366"	"61.2401"	"19460"	"19460"	"19443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1126.5"	""	"710.6"	""	"794.2"	""	"980.6"	"6.0"	"1061.7"	"1090.8"	""	"222"	"55"	"30.000"	"23.000"	"3.45400513418768E-05"	"23"	"0"	"0.0001567"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGPLLISLK"	"[R].dAGPLLISLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"495.65302"	"1484.94449"	"1484.94524"	"-0.50"	"-0.00025"	"9/86"	"9"	"86"	"5878697.05029297"	"HCD"	"MS2"	"5.588916"	"168.1"	"100.000"	"61.3252"	"19494"	"19494"	"19475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.2"	""	"209.4"	""	"202.4"	""	"278.4"	""	"304.7"	"318.7"	""	"222"	"34"	"30.000"	"23.000"	"0.00406745707859095"	"18"	"0"	"0.0001708"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGPLLISLK"	"[R].dAGPLLISLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"742.97601"	"1484.94475"	"1484.94524"	"-0.33"	"-0.00024"	"15/86"	"15"	"86"	"6775446.81262207"	"HCD"	"MS2"	"20.27086"	"444.5"	"100.000"	"60.8438"	"19244"	"19244"	"19225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"800.9"	""	"575.1"	""	"563.0"	""	"717.5"	"7.6"	"765.8"	"775.8"	""	"210"	"55"	"30.000"	"23.000"	"3.56606536219929E-05"	"20"	"0"	"5.682E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGPLLISLK"	"[R].dAGPLLISLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"495.65320"	"1484.94504"	"1484.94524"	"-0.13"	"-0.00007"	"9/86"	"9"	"86"	"8782053.32965088"	"HCD"	"MS2"	"15.85525"	"227.4"	"100.000"	"61.0146"	"19367"	"19367"	"19347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"414.9"	""	"269.8"	""	"300.8"	""	"376.6"	""	"392.7"	"397.0"	""	"208"	"35"	"30.000"	"23.000"	"0.00363942973709491"	"20"	"0"	"0.0001149"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGPLLISLK"	"[R].dAGPLLISLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"742.97620"	"1484.94512"	"1484.94524"	"-0.08"	"-0.00006"	"15/86"	"15"	"86"	"6397734.68676758"	"HCD"	"MS2"	"2.653516"	"411.7"	"100.000"	"61.1503"	"19370"	"19370"	"19353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"750.5"	""	"488.1"	""	"515.1"	""	"620.1"	"8.8"	"750.9"	"764.4"	""	"208"	"57"	"30.000"	"23.000"	"2.1728679760882E-05"	""	"0"	"8.857E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGPLLISLK"	"[R].dAGPLLISLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"495.65341"	"1484.94568"	"1484.94524"	"0.30"	"0.00015"	"9/86"	"9"	"86"	"6137042.78704834"	"HCD"	"MS2"	"6.208105"	"173.9"	"100.000"	"61.1618"	"19374"	"19374"	"19353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.4"	""	"205.5"	""	"236.6"	""	"279.9"	""	"331.1"	"314.8"	""	"207"	"38"	"30.000"	"23.000"	"0.00177394581327122"	"19"	"0"	"0.0001063"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGPLLISLK"	"[R].dAGPLLISLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"495.65372"	"1484.94660"	"1484.94524"	"0.92"	"0.00045"	"9/86"	"9"	"86"	"5343672.64910889"	"HCD"	"MS2"	"23.31392"	"160.0"	"100.000"	"60.8324"	"19240"	"19240"	"19209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.9"	""	"223.8"	""	"209.7"	""	"265.6"	""	"286.1"	"265.3"	""	"207"	"25"	"30.000"	"23.000"	"0.0325042649816189"	"18"	"0.0001889"	"0.0009284"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"743.37885"	"1485.75041"	"1485.75352"	"-2.09"	"-0.00155"	"6/96"	"6"	"96"	"1484198.84472656"	"HCD"	"MS2"	"0"	"99.7"	"100.000"	"43.5642"	"12270"	"12270"	"12244"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.5"	""	"148.3"	""	"128.3"	""	"167.9"	"0.9"	"186.0"	"174.8"	""	"591"	"19"	"34.000"	"27.000"	"0.334624307336107"	"18"	"0.0003839"	"0.001724"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"743.37994"	"1485.75261"	"1485.75352"	"-0.61"	"-0.00046"	"6/96"	"6"	"96"	"853766.311645508"	"HCD"	"MS2"	"0"	"65.3"	"100.000"	"43.3988"	"12154"	"12154"	"12127"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.0"	""	"93.4"	""	"83.7"	""	"111.9"	"1.9"	"126.0"	"114.6"	""	"628"	"21"	"34.000"	"27.000"	"0.269730245752694"	"18"	"0.0003839"	"0.00173"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFLDNLDK"	"[K].yFLDNLDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"743.42047"	"1485.83367"	"1485.83535"	"-1.13"	"-0.00084"	"4/68"	"4"	"68"	"6034168.01977539"	"HCD"	"MS2"	"52.43797"	"345.8"	"75.865"	"56.0526"	"17292"	"17292"	"17275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"418.8"	""	"425.0"	""	"414.3"	""	"581.5"	""	"690.1"	"756.8"	""	"780"	"9"	"35.000"	"28.000"	"5.23678334843766"	"19"	"0.0003571"	"0.001483"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTNIFLK"	"[K].eYTNIFLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"495.96103"	"1485.86853"	"1485.87174"	"-2.16"	"-0.00107"	"6/68"	"6"	"68"	"4059997.35974121"	"HCD"	"MS2"	"49.63435"	"139.9"	"100.000"	"55.3150"	"17044"	"17044"	"17013"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.3"	""	"208.1"	""	"209.7"	""	"225.6"	"2.1"	"244.7"	"231.5"	""	"680"	"30"	"35.000"	"28.000"	"0.0318771082354799"	"22"	"0.0003839"	"0.001613"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTNIFLK"	"[K].eYTNIFLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"743.43835"	"1485.86943"	"1485.87174"	"-1.55"	"-0.00115"	"7/68"	"7"	"68"	"5853119.48736572"	"HCD"	"MS2"	"26.45568"	"478.1"	"100.000"	"55.2943"	"17035"	"17035"	"17013"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"744.5"	""	"728.2"	""	"680.0"	""	"709.1"	"6.2"	"855.0"	"801.6"	""	"696"	"37"	"35.000"	"28.000"	"0.00636178875217673"	""	"0.0001889"	"0.0009611"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTNIFLK"	"[K].eYTNIFLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"495.96164"	"1485.87036"	"1485.87174"	"-0.92"	"-0.00046"	"6/68"	"6"	"68"	"3274218.92279053"	"HCD"	"MS2"	"52.2452"	"124.5"	"100.000"	"55.2263"	"16954"	"16954"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"190.5"	""	"167.9"	""	"173.0"	""	"205.3"	"0.9"	"222.8"	"218.5"	""	"704"	"31"	"35.000"	"28.000"	"0.0303069800768979"	"21"	"0.0001889"	"0.0008349"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTNIFLK"	"[K].eYTNIFLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"743.43896"	"1485.87065"	"1485.87174"	"-0.73"	"-0.00054"	"7/68"	"7"	"68"	"1575383.40795898"	"HCD"	"MS2"	"23.82056"	"149.2"	"100.000"	"55.6117"	"17165"	"17165"	"17141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.9"	""	"206.1"	""	"203.3"	""	"237.3"	"1.4"	"285.7"	"281.3"	""	"691"	"24"	"35.000"	"28.000"	"0.124867107541986"	"26"	"0.0001889"	"0.0005925"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTNIFLK"	"[K].eYTNIFLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"743.43927"	"1485.87126"	"1485.87174"	"-0.32"	"-0.00024"	"7/68"	"7"	"68"	"6693050.62841797"	"HCD"	"MS2"	"17.27116"	"541.2"	"100.000"	"55.1277"	"16913"	"16913"	"16891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"840.2"	""	"814.3"	""	"778.3"	""	"849.1"	"0.9"	"950.1"	"888.0"	""	"691"	"36"	"35.000"	"28.000"	"0.00949397429896879"	"27"	"0.0001889"	"0.001038"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EYTNIFLK"	"[K].eYTNIFLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"743.43976"	"1485.87224"	"1485.87174"	"0.34"	"0.00025"	"5/68"	"5"	"68"	"1174126.97259521"	"HCD"	"MS2"	"42.74739"	"123.8"	"100.000"	"55.4562"	"17048"	"17048"	"17019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.1"	""	"172.7"	""	"168.6"	""	"199.6"	"0.2"	"245.2"	"224.8"	""	"685"	"2"	"35.000"	"28.000"	"21.7100376105497"	"14"	"0.005946"	"0.1988"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVEKPPK"	"[R].tVEkPPk.[F]"	"N-Term(TMT6plex); K4(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"495.99127"	"1485.95926"	"1485.96078"	"-1.02"	"-0.00050"	"6/58"	"6"	"58"	"19407048.4383545"	"HCD"	"MS2"	"16.03202"	"1266.1"	"100.000"	"27.7001"	"5793"	"5793"	"5772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1672.7"	""	"1743.5"	""	"1604.0"	""	"1705.3"	""	"2391.6"	"2903.7"	""	"242"	"6"	"30.000"	"23.000"	"3.23433775448261"	"16"	"0.0006037"	"0.004521"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVEKPPK"	"[R].tVEkPPk.[F]"	"N-Term(TMT6plex); K4(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"495.99142"	"1485.95972"	"1485.96078"	"-0.71"	"-0.00035"	"6/58"	"6"	"58"	"26378096.8885498"	"HCD"	"MS2"	"8.248078"	"1837.0"	"100.000"	"27.7794"	"5860"	"5860"	"5841"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2306.1"	""	"2546.2"	""	"2305.1"	""	"2502.8"	""	"3505.9"	"4324.6"	""	"242"	"5"	"30.000"	"23.000"	"4.05308181380972"	"13"	"0.0004166"	"0.002256"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVEKPPK"	"[R].tVEkPPk.[F]"	"N-Term(TMT6plex); K4(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"743.48389"	"1485.96050"	"1485.96078"	"-0.19"	"-0.00014"	"6/58"	"6"	"58"	"1040080.52142334"	"HCD"	"MS2"	"0"	"81.5"	"100.000"	"27.8001"	"5869"	"5869"	"5841"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.3"	""	"101.2"	""	"98.3"	""	"114.4"	""	"155.0"	"198.6"	""	"230"	"25"	"30.000"	"23.000"	"0.0337829709975576"	"22"	"0.0003839"	"0.002059"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGIDNFEFIR"	"[R].fGIDNFEFIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64617"	"Protein kinase C eta type OS=Rattus norvegicus OX=10116 GN=Prkch PE=1 SV=1"	"Q64617"	"Protein kinase C eta type OS=Rattus norvegicus OX=10116 GN=Prkch PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"743.89691"	"1486.78655"	"1486.78918"	"-1.77"	"-0.00132"	"7/88"	"7"	"88"	"695736.522705078"	"HCD"	"MS2"	"0"	"53.3"	"100.000"	"71.1767"	"23507"	"23507"	"23482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.4"	""	"68.0"	""	"78.6"	""	"86.2"	""	"95.3"	"108.1"	""	"777"	"22"	"35.000"	"28.000"	"0.273143596274869"	"17"	"0.0001889"	"0.0004467"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGIDNFEFIR"	"[R].fGIDNFEFIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64617"	"Protein kinase C eta type OS=Rattus norvegicus OX=10116 GN=Prkch PE=1 SV=1"	"Q64617"	"Protein kinase C eta type OS=Rattus norvegicus OX=10116 GN=Prkch PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"743.89789"	"1486.78850"	"1486.78918"	"-0.46"	"-0.00034"	"8/88"	"8"	"88"	"730462.340942383"	"HCD"	"MS2"	"0"	"56.8"	"100.000"	"71.1805"	"23457"	"23457"	"23427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.7"	""	"76.3"	""	"79.5"	""	"88.5"	""	"102.2"	"121.3"	""	"791"	"32"	"35.000"	"28.000"	"0.0240517393005733"	"16"	"0.0001889"	"0.0008461"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLEWPLSK"	"[R].rLEWPLSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"1"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"496.30856"	"1486.91114"	"1486.91461"	"-2.33"	"-0.00116"	"7/78"	"7"	"78"	"5845051.78479004"	"HCD"	"MS2"	"29.72884"	"225.1"	"100.000"	"43.2711"	"12154"	"12154"	"12137"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"336.8"	""	"321.0"	""	"352.4"	""	"376.7"	"0.5"	"368.6"	"372.3"	""	"525"	"26"	"34.000"	"27.000"	"0.0653325046049128"	"16"	"0.0001308"	"0.0002224"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"RLEWPLSK"	"[R].rLEWPLSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"496.30896"	"1486.91233"	"1486.91461"	"-1.53"	"-0.00076"	"4/78"	"4"	"78"	"6513892.39056396"	"HCD"	"MS2"	"51.02042"	"250.2"	"100.000"	"43.0858"	"12030"	"12030"	"12021"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.5"	""	"360.4"	""	"393.3"	""	"402.3"	""	"422.3"	"433.3"	""	"519"	"10"	"34.000"	"27.000"	"2.85849450825997"	"23"	"0.0003839"	"0.00172"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLEWPLSK"	"[R].rLEWPLSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"1"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"496.30914"	"1486.91288"	"1486.91461"	"-1.16"	"-0.00058"	"5/78"	"5"	"78"	"3611544.78112793"	"HCD"	"MS2"	"55.85971"	"139.8"	"100.000"	"43.7884"	"12312"	"12312"	"12290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.3"	""	"157.0"	""	"198.5"	""	"268.9"	"0.6"	"266.5"	"263.5"	""	"504"	"18"	"34.000"	"27.000"	"0.409638286449122"	"17"	"0.0002277"	"0.001245"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLEWPLSK"	"[R].rLEWPLSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.30923"	"1486.91315"	"1486.91461"	"-0.98"	"-0.00048"	"7/78"	"7"	"78"	"3759287.92950439"	"HCD"	"MS2"	"28.61997"	"152.5"	"100.000"	"44.0109"	"12452"	"12452"	"12431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.6"	""	"189.3"	""	"213.3"	""	"279.7"	""	"288.0"	"275.6"	""	"504"	"23"	"34.000"	"27.000"	"0.131038991126446"	"14"	"0.0001889"	"0.0005202"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLDALLEGK"	"[R].aVLDALLEGk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205; P34926"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3; Microtubule-associated protein 1A OS=Rattus norvegicus OX=10116 GN=Map1a PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"496.31281"	"1486.92386"	"1486.92450"	"-0.43"	"-0.00021"	"8/80"	"8"	"80"	"2065261.67114258"	"HCD"	"MS2"	"45.88724"	"63.4"	"100.000"	"73.8835"	"24612"	"24612"	"24591"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.7"	""	"61.1"	""	"72.4"	""	"157.0"	""	"132.2"	"115.3"	""	"453"	"23"	"33.000"	"26.000"	"0.116699287997768"	"20"	"0.0001889"	"0.0009062"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLDALLEGK"	"[R].aVLDALLEGk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205; P34926"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3; Microtubule-associated protein 1A OS=Rattus norvegicus OX=10116 GN=Map1a PE=1 SV=1"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"496.31305"	"1486.92459"	"1486.92450"	"0.06"	"0.00003"	"8/80"	"8"	"80"	"1992418.22875977"	"HCD"	"MS2"	"47.56754"	"65.6"	"100.000"	"73.8697"	"24555"	"24555"	"24529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.2"	""	"78.3"	""	"77.2"	""	"148.6"	""	"135.2"	"118.8"	""	"425"	"20"	"33.000"	"26.000"	"0.215456169469045"	"21"	"0.0001859"	"0.0003731"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELLEAIKR"	"[K].gELLEAIkR.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07895"	"Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus OX=10116 GN=Sod2 PE=1 SV=2"	"P07895"	"Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus OX=10116 GN=Sod2 PE=1 SV=2"	"1"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"496.31613"	"1486.93384"	"1486.93573"	"-1.27"	"-0.00063"	"6/72"	"6"	"72"	"10813146.9358521"	"HCD"	"MS2"	"10.53119"	"420.9"	"76.210"	"41.4673"	"11375"	"11375"	"11355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"839.7"	""	"660.7"	""	"762.6"	""	"571.7"	""	"536.0"	"597.7"	""	"403"	"22"	"33.000"	"26.000"	"0.125682569349707"	"15"	"0.0001889"	"0.0007544"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPTGATPK"	"[K].kPTGATPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZBN0"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1"	"D3ZBN0"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"3"	"496.32275"	"1486.95371"	"1486.95603"	"-1.56"	"-0.00077"	"7/76"	"7"	"76"	"12920429.1915894"	"HCD"	"MS2"	"13.70945"	"709.8"	"100.000"	"25.6076"	"4946"	"4946"	"4923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1007.7"	""	"1251.1"	""	"1405.5"	""	"929.8"	""	"1289.2"	"824.1"	""	"344"	"20"	"32.000"	"25.000"	"0.189029004382394"	"20"	"0.0001308"	"0.0002802"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPTGATPK"	"[K].kPTGATPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZBN0"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1"	"D3ZBN0"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"3"	"496.32318"	"1486.95499"	"1486.95603"	"-0.70"	"-0.00034"	"7/76"	"7"	"76"	"11692542.5272217"	"HCD"	"MS2"	"7.393806"	"643.0"	"100.000"	"25.7211"	"5028"	"5028"	"4999"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"868.7"	""	"1091.1"	""	"1230.5"	""	"942.2"	""	"1182.8"	"790.4"	""	"330"	"19"	"32.000"	"25.000"	"0.206292739985924"	"19"	"0.0001889"	"0.0003849"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVINVPIFK"	"[K].vVINVPIFk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.99152"	"1486.97576"	"1486.97614"	"-0.26"	"-0.00019"	"7/76"	"7"	"76"	"2563697.84918213"	"HCD"	"MS2"	"27.92307"	"145.6"	"100.000"	"68.5367"	"22429"	"22429"	"22410"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.3"	""	"194.2"	""	"218.8"	""	"218.0"	"0.8"	"241.8"	"259.5"	""	"248"	"37"	"30.000"	"23.000"	"0.00236277129027443"	"15"	"0.0001889"	"0.0006926"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVINVPIFK"	"[K].vVINVPIFk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.99237"	"1486.97746"	"1486.97614"	"0.89"	"0.00066"	"12/76"	"12"	"76"	"2592551.59448242"	"HCD"	"MS2"	"38.98949"	"146.3"	"100.000"	"68.6993"	"22444"	"22444"	"22426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.5"	""	"187.4"	""	"211.3"	""	"230.2"	"1.9"	"255.2"	"266.6"	""	"208"	"32"	"30.000"	"23.000"	"0.00679255774753371"	"14"	"0"	"0.000177"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"744.36926"	"1487.73125"	"1487.73279"	"-1.03"	"-0.00077"	"10/104"	"10"	"104"	"2538081.60168457"	"HCD"	"MS2"	"0"	"158.4"	"100.000"	"42.2259"	"11728"	"11728"	"11712"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.1"	""	"189.7"	""	"234.6"	""	"265.7"	"1.5"	"280.7"	"319.7"	""	"492"	"62"	"33.000"	"26.000"	"1.38654863333185E-05"	"19"	"0"	"4.765E-06"	"1.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9853"	"0.0000"	"1"	"1"	"1"	"744.36932"	"1487.73137"	"1487.73279"	"-0.95"	"-0.00071"	"10/104"	"10"	"104"	"2792506.46228027"	"HCD"	"MS2"	"0"	"175.0"	"100.000"	"42.0148"	"11597"	"11597"	"11586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"225.0"	""	"216.8"	""	"262.3"	""	"288.3"	""	"313.3"	"355.1"	""	"492"	"68"	"33.000"	"26.000"	"3.90782500155055E-06"	"18"	"0"	"5.883E-06"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41821"	"1487.82915"	"1487.83324"	"-2.75"	"-0.00205"	"7/66"	"7"	"66"	"4975980.7121582"	"HCD"	"MS2"	"0"	"303.0"	"100.000"	"53.7754"	"16418"	"16418"	"16409"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.0"	""	"284.8"	""	"340.8"	""	"604.7"	"5.4"	"646.7"	"646.9"	""	"941"	"42"	"36.000"	"29.000"	"0.00275143734589979"	"15"	"0.0004557"	"0.002619"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41821"	"1487.82915"	"1487.83324"	"-2.75"	"-0.00205"	"7/66"	"7"	"66"	"6474175.7265625"	"HCD"	"MS2"	"11.89841"	"406.2"	"100.000"	"53.3057"	"16181"	"16181"	"16171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"451.8"	""	"389.3"	""	"479.4"	""	"821.9"	"1.9"	"848.1"	"867.4"	""	"941"	"39"	"36.000"	"29.000"	"0.0058419741072223"	"15"	"0.0005564"	"0.003393"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41833"	"1487.82939"	"1487.83324"	"-2.59"	"-0.00193"	"7/66"	"7"	"66"	"8772085.34912109"	"HCD"	"MS2"	"0"	"543.1"	"100.000"	"53.0295"	"16076"	"16076"	"16066"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"560.8"	""	"518.5"	""	"617.8"	""	"1127.6"	"1.2"	"1160.4"	"1177.2"	""	"945"	"42"	"36.000"	"29.000"	"0.00276950282732878"	"15"	"0.000523"	"0.00302"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"744.41846"	"1487.82964"	"1487.83324"	"-2.42"	"-0.00180"	"7/66"	"7"	"66"	"1565846.86175537"	"HCD"	"MS2"	"0"	"124.9"	"100.000"	"54.1879"	"16529"	"16529"	"16509"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.0"	""	"120.2"	""	"151.7"	""	"238.3"	"4.6"	"293.1"	"260.0"	""	"927"	"40"	"36.000"	"29.000"	"0.00459250606457798"	"18"	"0.0001889"	"0.0006028"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41846"	"1487.82964"	"1487.83324"	"-2.42"	"-0.00180"	"7/66"	"7"	"66"	"8807204.73510742"	"HCD"	"MS2"	"0"	"539.7"	"100.000"	"53.2120"	"16201"	"16201"	"16182"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"580.6"	"2.8"	"513.5"	""	"639.2"	""	"1056.9"	"0.1"	"1166.4"	"1171.4"	""	"927"	"42"	"36.000"	"29.000"	"0.00269184307521128"	"15"	"0.0005564"	"0.003556"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41852"	"1487.82976"	"1487.83324"	"-2.34"	"-0.00174"	"7/66"	"7"	"66"	"4896912.6239624"	"HCD"	"MS2"	"0"	"307.7"	"100.000"	"53.5806"	"16287"	"16287"	"16275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"356.0"	""	"299.8"	""	"368.1"	""	"594.6"	"5.9"	"659.6"	"639.6"	""	"927"	"42"	"36.000"	"29.000"	"0.00276725855331609"	"15"	"0.0004557"	"0.002602"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41864"	"1487.83000"	"1487.83324"	"-2.18"	"-0.00162"	"7/66"	"7"	"66"	"3691433.48596191"	"HCD"	"MS2"	"35.57853"	"217.0"	"100.000"	"53.8644"	"16398"	"16398"	"16387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.9"	""	"177.9"	""	"223.1"	""	"508.3"	""	"500.2"	"475.8"	""	"919"	"33"	"36.000"	"29.000"	"0.0245067384476562"	"15"	"0.0004166"	"0.00217"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"744.41895"	"1487.83061"	"1487.83324"	"-1.77"	"-0.00131"	"7/66"	"7"	"66"	"1666344.15429688"	"HCD"	"MS2"	"16.78417"	"125.4"	"100.000"	"54.4056"	"16671"	"16671"	"16651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.2"	""	"128.7"	""	"152.1"	""	"255.7"	"5.8"	"280.5"	"254.0"	""	"922"	"40"	"36.000"	"29.000"	"0.00448436470161181"	"22"	"0.0002277"	"0.001242"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41895"	"1487.83061"	"1487.83324"	"-1.77"	"-0.00131"	"7/66"	"7"	"66"	"6729384.41479492"	"HCD"	"MS2"	"0"	"416.1"	"100.000"	"53.4959"	"16311"	"16311"	"16298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"449.6"	""	"387.9"	""	"509.6"	""	"840.2"	"7.4"	"877.5"	"882.4"	""	"922"	"40"	"36.000"	"29.000"	"0.00421406204317785"	"15"	"0.000523"	"0.003238"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41907"	"1487.83086"	"1487.83324"	"-1.60"	"-0.00119"	"7/66"	"7"	"66"	"22016013.0592041"	"HCD"	"MS2"	"0"	"503.6"	"40.648"	"50.1110"	"14935"	"14935"	"14919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"466.7"	""	"489.7"	""	"580.5"	""	"1084.3"	""	"1066.5"	"1102.2"	""	"923"	"41"	"36.000"	"29.000"	"0.00369974426253414"	"15"	"0.0008731"	"0.008971"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61514"	"1487.83088"	"1487.83324"	"-1.59"	"-0.00079"	"9/66"	"9"	"66"	"32806030.0809326"	"HCD"	"MS2"	"5.5733"	"285.4"	"34.398"	"50.6378"	"15148"	"15148"	"15132"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.9"	""	"294.9"	""	"326.2"	""	"595.3"	""	"606.2"	"603.4"	""	"923"	"20"	"36.000"	"29.000"	"0.420893002362753"	"14"	"0.0001889"	"0.001078"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"496.61514"	"1487.83088"	"1487.83324"	"-1.59"	"-0.00079"	"9/66"	"9"	"66"	"21810720.9475098"	"HCD"	"MS2"	"14.30783"	"263.4"	"43.130"	"50.0789"	"14922"	"14922"	"14905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"243.3"	""	"290.8"	""	"313.4"	""	"524.3"	""	"574.0"	"560.5"	""	"923"	"23"	"36.000"	"29.000"	"0.251287974286777"	"17"	"0.0005564"	"0.003302"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61517"	"1487.83097"	"1487.83324"	"-1.53"	"-0.00076"	"9/66"	"9"	"66"	"32795824.6853027"	"HCD"	"MS2"	"4.517581"	"484.7"	"62.862"	"46.2729"	"13322"	"13322"	"13304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"418.5"	""	"455.7"	""	"544.3"	""	"977.6"	"14.9"	"1186.5"	"1018.9"	""	"923"	"21"	"36.000"	"29.000"	"0.374258528199548"	"14"	"0.0002277"	"0.001332"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41919"	"1487.83110"	"1487.83324"	"-1.44"	"-0.00107"	"7/66"	"7"	"66"	"3323105.46228027"	"HCD"	"MS2"	"11.21362"	"201.3"	"100.000"	"54.0913"	"16543"	"16543"	"16529"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.2"	""	"176.7"	""	"209.9"	""	"447.6"	"6.4"	"457.5"	"436.5"	""	"923"	"36"	"36.000"	"29.000"	"0.0111217135533886"	"15"	"0.0006037"	"0.004509"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61523"	"1487.83115"	"1487.83324"	"-1.41"	"-0.00070"	"10/66"	"10"	"66"	"23486342.8897705"	"HCD"	"MS2"	"0"	"366.5"	"61.759"	"50.3560"	"15034"	"15034"	"15020"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"345.9"	""	"348.8"	""	"424.7"	""	"768.2"	""	"797.5"	"803.7"	""	"923"	"24"	"36.000"	"29.000"	"0.176267280992682"	"14"	"0.0001889"	"0.001004"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61530"	"1487.83133"	"1487.83324"	"-1.28"	"-0.00064"	"9/66"	"9"	"66"	"36472769.1707764"	"HCD"	"MS2"	"4.529977"	"291.0"	"34.884"	"45.9457"	"13238"	"13238"	"13227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"283.6"	""	"278.0"	""	"331.9"	""	"624.5"	""	"629.2"	"624.9"	""	"885"	"28"	"36.000"	"29.000"	"0.0753205139964765"	"14"	"0.0001889"	"0.001084"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41937"	"1487.83147"	"1487.83324"	"-1.19"	"-0.00089"	"7/66"	"7"	"66"	"26683812.1907959"	"HCD"	"MS2"	"0"	"514.4"	"33.015"	"45.5587"	"13084"	"13084"	"13067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"497.0"	"2.8"	"492.1"	""	"575.8"	""	"1108.3"	"3.4"	"1085.9"	"1126.4"	""	"885"	"42"	"36.000"	"29.000"	"0.00250560885399427"	"15"	"0.0002277"	"0.001152"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41943"	"1487.83159"	"1487.83324"	"-1.11"	"-0.00083"	"7/66"	"7"	"66"	"23732545.5758057"	"HCD"	"MS2"	"0"	"297.8"	"37.515"	"50.3973"	"15050"	"15050"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.2"	""	"292.1"	""	"338.6"	""	"604.0"	"1.0"	"651.2"	"646.9"	""	"885"	"42"	"36.000"	"29.000"	"0.00252297690484231"	"15"	"0.001125"	"0.01514"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"496.61539"	"1487.83161"	"1487.83324"	"-1.10"	"-0.00055"	"9/66"	"9"	"66"	"19245434.8734131"	"HCD"	"MS2"	"3.948265"	"298.3"	"55.983"	"49.8113"	"14766"	"14766"	"14751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.9"	""	"308.8"	""	"352.5"	""	"605.8"	""	"649.5"	"620.5"	""	"886"	"24"	"36.000"	"29.000"	"0.157907852107826"	"19"	"0.0006037"	"0.004487"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41949"	"1487.83171"	"1487.83324"	"-1.03"	"-0.00077"	"7/66"	"7"	"66"	"20561831.5844727"	"HCD"	"MS2"	"0"	"451.9"	"35.380"	"49.9265"	"14812"	"14812"	"14803"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"428.6"	""	"419.1"	""	"501.7"	""	"953.4"	"2.5"	"985.4"	"1008.6"	""	"893"	"42"	"36.000"	"29.000"	"0.00255165211273988"	"15"	"0.0006037"	"0.005502"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41956"	"1487.83183"	"1487.83324"	"-0.95"	"-0.00070"	"7/66"	"7"	"66"	"29611416.3251953"	"HCD"	"MS2"	"4.999028"	"443.4"	"25.963"	"50.7088"	"15177"	"15177"	"15162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"452.3"	""	"444.1"	""	"514.6"	""	"919.8"	""	"925.8"	"961.1"	""	"893"	"42"	"36.000"	"29.000"	"0.00263524782296728"	"15"	"0.0009404"	"0.01005"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61548"	"1487.83188"	"1487.83324"	"-0.92"	"-0.00045"	"9/66"	"9"	"66"	"41557839.1745605"	"HCD"	"MS2"	"3.080565"	"319.8"	"33.278"	"46.5280"	"13475"	"13475"	"13459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.9"	""	"308.9"	""	"348.9"	""	"654.8"	"0.7"	"770.8"	"672.5"	""	"893"	"26"	"36.000"	"29.000"	"0.110616894873326"	"15"	"0.0003839"	"0.001781"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61548"	"1487.83188"	"1487.83324"	"-0.92"	"-0.00045"	"11/66"	"11"	"66"	"32911239.8605957"	"HCD"	"MS2"	"6.792308"	"371.8"	"47.466"	"48.2060"	"14161"	"14161"	"14146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"349.0"	""	"362.1"	""	"437.9"	""	"775.3"	"0.3"	"829.1"	"782.0"	""	"893"	"21"	"36.000"	"29.000"	"0.33405768197823"	"14"	"0.0002277"	"0.001305"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41962"	"1487.83196"	"1487.83324"	"-0.86"	"-0.00064"	"7/66"	"7"	"66"	"32441475.5983887"	"HCD"	"MS2"	"0"	"381.6"	"19.950"	"45.6403"	"13064"	"13064"	"13047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.2"	""	"350.7"	""	"448.8"	""	"850.3"	""	"789.3"	"816.6"	""	"893"	"39"	"36.000"	"29.000"	"0.00550581308036707"	"15"	"0.00103"	"0.01172"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41962"	"1487.83196"	"1487.83324"	"-0.86"	"-0.00064"	"7/66"	"7"	"66"	"33575870.8364258"	"HCD"	"MS2"	"0"	"437.5"	"22.582"	"45.8333"	"13192"	"13192"	"13181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.0"	""	"430.5"	""	"475.3"	""	"932.8"	""	"930.7"	"965.0"	""	"893"	"42"	"36.000"	"29.000"	"0.0025282584255558"	"15"	"0.00103"	"0.01189"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41962"	"1487.83196"	"1487.83324"	"-0.86"	"-0.00064"	"7/66"	"7"	"66"	"22505937.3897705"	"HCD"	"MS2"	"0"	"573.1"	"42.605"	"45.3381"	"12945"	"12945"	"12928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"551.1"	""	"543.3"	""	"644.3"	""	"1226.0"	"1.7"	"1237.2"	"1246.4"	""	"893"	"42"	"36.000"	"29.000"	"0.00256343000375572"	"15"	"0.0008125"	"0.007758"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41962"	"1487.83196"	"1487.83324"	"-0.86"	"-0.00064"	"7/66"	"7"	"66"	"16889697.1461182"	"HCD"	"MS2"	"1.22833"	"469.1"	"48.178"	"52.6918"	"15939"	"15939"	"15922"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"441.1"	""	"469.8"	""	"543.4"	""	"969.8"	""	"1028.3"	"1013.8"	""	"893"	"42"	"36.000"	"29.000"	"0.00258119885166653"	"15"	"0.0007076"	"0.006842"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41962"	"1487.83196"	"1487.83324"	"-0.86"	"-0.00064"	"7/66"	"7"	"66"	"32670211.9041748"	"HCD"	"MS2"	"0"	"689.6"	"37.115"	"46.2295"	"13305"	"13305"	"13288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"638.7"	""	"591.5"	""	"755.7"	""	"1419.3"	"14.1"	"1683.3"	"1463.9"	""	"893"	"41"	"36.000"	"29.000"	"0.0039068025563905"	"15"	"0.00103"	"0.01211"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41962"	"1487.83196"	"1487.83324"	"-0.86"	"-0.00064"	"7/66"	"7"	"66"	"18848197.4227905"	"HCD"	"MS2"	"0"	"774.0"	"72.098"	"50.2107"	"14925"	"14925"	"14918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"746.6"	""	"742.6"	""	"871.0"	""	"1645.4"	"3.5"	"1680.4"	"1671.6"	""	"893"	"41"	"36.000"	"29.000"	"0.00360430441006106"	"15"	"0.0006037"	"0.005803"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61551"	"1487.83197"	"1487.83324"	"-0.85"	"-0.00042"	"9/66"	"9"	"66"	"32014712.2911377"	"HCD"	"MS2"	"9.42073"	"251.6"	"30.710"	"45.9726"	"13199"	"13199"	"13181"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.2"	""	"230.0"	""	"277.9"	""	"512.1"	"2.1"	"600.7"	"548.5"	""	"893"	"27"	"36.000"	"29.000"	"0.0880686751675281"	"14"	"0.0001889"	"0.0009115"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61551"	"1487.83197"	"1487.83324"	"-0.85"	"-0.00042"	"9/66"	"9"	"66"	"28287887.6383057"	"HCD"	"MS2"	"3.827978"	"293.6"	"44.947"	"51.5662"	"15528"	"15528"	"15510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"283.0"	""	"282.9"	""	"338.8"	""	"617.5"	""	"617.9"	"651.9"	""	"893"	"27"	"36.000"	"29.000"	"0.0803195863605003"	"14"	"0.0003839"	"0.001879"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61551"	"1487.83197"	"1487.83324"	"-0.85"	"-0.00042"	"9/66"	"9"	"66"	"29555007.5187988"	"HCD"	"MS2"	"6.473668"	"367.7"	"50.845"	"45.6837"	"13081"	"13081"	"13063"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"343.1"	""	"334.0"	""	"407.0"	""	"806.3"	""	"791.2"	"817.6"	""	"893"	"27"	"36.000"	"29.000"	"0.0805047421293797"	"14"	"0.0001889"	"0.0008485"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61551"	"1487.83197"	"1487.83324"	"-0.85"	"-0.00042"	"10/66"	"10"	"66"	"26620316.3522949"	"HCD"	"MS2"	"2.54927"	"474.6"	"72.153"	"46.2484"	"13361"	"13361"	"13344"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"405.7"	""	"436.8"	""	"516.2"	""	"977.7"	""	"1138.0"	"1047.9"	""	"893"	"26"	"36.000"	"29.000"	"0.113715970777922"	"14"	"0.0001889"	"0.0009954"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61554"	"1487.83207"	"1487.83324"	"-0.79"	"-0.00039"	"9/66"	"9"	"66"	"44072591.4655762"	"HCD"	"MS2"	"5.380026"	"262.7"	"24.193"	"48.8375"	"14419"	"14419"	"14399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.9"	""	"281.2"	""	"308.8"	""	"519.8"	""	"573.3"	"563.1"	""	"893"	"24"	"36.000"	"29.000"	"0.172910538457502"	"14"	"0.0001889"	"0.0009544"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61554"	"1487.83207"	"1487.83324"	"-0.79"	"-0.00039"	"9/66"	"9"	"66"	"37053110.0759277"	"HCD"	"MS2"	"4.11593"	"288.9"	"32.772"	"49.7827"	"14801"	"14801"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.1"	""	"272.4"	""	"329.6"	""	"602.1"	""	"654.1"	"618.1"	""	"893"	"27"	"36.000"	"29.000"	"0.0870605613791966"	"15"	"0.0002277"	"0.001185"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41968"	"1487.83208"	"1487.83324"	"-0.78"	"-0.00058"	"7/66"	"7"	"66"	"36040168.7385254"	"HCD"	"MS2"	"0"	"492.5"	"23.526"	"46.4568"	"13445"	"13445"	"13429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"455.4"	""	"479.7"	""	"569.8"	""	"963.1"	""	"1175.2"	"1050.0"	""	"893"	"42"	"36.000"	"29.000"	"0.00256343000375572"	"15"	"0.001454"	"0.02006"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41968"	"1487.83208"	"1487.83324"	"-0.78"	"-0.00058"	"8/66"	"8"	"66"	"20544422.0057373"	"HCD"	"MS2"	"29.26201"	"492.5"	"36.574"	"46.4683"	"13450"	"13450"	"13429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"455.4"	""	"479.7"	""	"569.8"	""	"963.1"	""	"1175.2"	"1050.0"	""	"893"	"6"	"36.000"	"29.000"	"11.0616894873326"	"13"	"0.009176"	"0.4117"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61557"	"1487.83216"	"1487.83324"	"-0.73"	"-0.00036"	"6/66"	"6"	"66"	"18366361.5993652"	"HCD"	"MS2"	"4.035957"	"462.4"	"98.534"	"50.1051"	"14883"	"14883"	"14865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"427.9"	""	"423.9"	""	"547.8"	""	"991.3"	""	"995.9"	"1012.1"	""	"887"	"27"	"36.000"	"29.000"	"0.0827739392885175"	"14"	"0.0001889"	"0.000718"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61557"	"1487.83216"	"1487.83324"	"-0.73"	"-0.00036"	"11/66"	"11"	"66"	"23015082.1928711"	"HCD"	"MS2"	"9.230466"	"353.0"	"61.488"	"51.9486"	"15635"	"15635"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.2"	""	"354.3"	""	"409.9"	""	"745.0"	"2.9"	"758.4"	"765.1"	""	"887"	"18"	"36.000"	"29.000"	"0.642530317047101"	"14"	"0.0002277"	"0.001244"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"744.41974"	"1487.83220"	"1487.83324"	"-0.70"	"-0.00052"	"8/66"	"8"	"66"	"2872342.44024658"	"HCD"	"MS2"	"29.40049"	"236.4"	"100.000"	"61.9458"	"19694"	"19694"	"19673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.4"	""	"274.3"	""	"301.5"	""	"381.9"	""	"455.0"	"572.4"	""	"887"	"9"	"36.000"	"29.000"	"5.35665435869857"	"17"	"0.00738"	"0.274"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61560"	"1487.83225"	"1487.83324"	"-0.67"	"-0.00033"	"9/66"	"9"	"66"	"20259227.1990356"	"HCD"	"MS2"	"4.4361"	"322.7"	"71.376"	"52.5174"	"15917"	"15917"	"15894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.2"	"2.1"	"298.3"	""	"365.0"	""	"679.9"	"4.3"	"715.1"	"700.1"	""	"887"	"26"	"36.000"	"29.000"	"0.1013663069297"	"14"	"0.0001889"	"0.001061"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41980"	"1487.83232"	"1487.83324"	"-0.62"	"-0.00046"	"7/66"	"7"	"66"	"55012088.409668"	"HCD"	"MS2"	"0"	"485.8"	"16.502"	"45.2461"	"12956"	"12956"	"12939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"440.4"	""	"473.4"	""	"554.2"	""	"1071.9"	"6.0"	"1022.2"	"1050.8"	""	"886"	"41"	"36.000"	"29.000"	"0.00356782649451187"	"15"	"0.001217"	"0.01782"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"744.41980"	"1487.83232"	"1487.83324"	"-0.62"	"-0.00046"	"7/66"	"7"	"66"	"18523753.8131104"	"HCD"	"MS2"	"0"	"614.0"	"57.403"	"52.5794"	"15943"	"15943"	"15926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"615.1"	""	"601.0"	""	"730.5"	""	"1262.8"	"6.9"	"1310.4"	"1310.4"	""	"886"	"40"	"36.000"	"29.000"	"0.0040031671685898"	"16"	"0.00103"	"0.01241"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61563"	"1487.83234"	"1487.83324"	"-0.61"	"-0.00030"	"9/66"	"9"	"66"	"31485206.90271"	"HCD"	"MS2"	"7.919858"	"315.9"	"41.392"	"47.9450"	"14007"	"14007"	"13992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"300.6"	""	"286.1"	""	"373.5"	""	"657.4"	"0.6"	"697.0"	"689.7"	""	"886"	"22"	"36.000"	"29.000"	"0.252582772620371"	"14"	"0.0001889"	"0.001021"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61563"	"1487.83234"	"1487.83324"	"-0.61"	"-0.00030"	"9/66"	"9"	"66"	"38296775.0633545"	"HCD"	"MS2"	"5.719509"	"324.7"	"33.875"	"48.5626"	"14259"	"14259"	"14239"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"300.5"	""	"323.0"	""	"388.3"	""	"664.8"	""	"723.7"	"691.4"	""	"886"	"22"	"36.000"	"29.000"	"0.271896568288004"	"14"	"0.0002277"	"0.001314"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"496.61563"	"1487.83234"	"1487.83324"	"-0.61"	"-0.00030"	"9/66"	"9"	"66"	"36103336.0050049"	"HCD"	"MS2"	"5.747628"	"343.2"	"37.313"	"48.8702"	"14385"	"14385"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"342.0"	""	"321.6"	""	"402.9"	""	"701.6"	"0.1"	"778.5"	"717.5"	""	"886"	"29"	"36.000"	"29.000"	"0.0592111813830074"	"18"	"0.0001889"	"0.0008547"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"496.61566"	"1487.83243"	"1487.83324"	"-0.55"	"-0.00027"	"8/66"	"8"	"66"	"32806830.93396"	"HCD"	"MS2"	"19.65022"	"291.1"	"36.205"	"50.9429"	"15273"	"15273"	"15254"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.7"	""	"291.5"	""	"347.2"	""	"587.2"	""	"644.4"	"618.2"	""	"886"	"25"	"36.000"	"29.000"	"0.126009627059943"	"18"	"0.0006037"	"0.004228"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61566"	"1487.83243"	"1487.83324"	"-0.55"	"-0.00027"	"9/66"	"9"	"66"	"25658377.3173828"	"HCD"	"MS2"	"7.379199"	"361.7"	"57.689"	"50.4030"	"15002"	"15002"	"14984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.4"	""	"369.9"	""	"416.4"	""	"756.7"	""	"759.3"	"766.1"	""	"886"	"24"	"36.000"	"29.000"	"0.173941706382023"	"14"	"0.0002277"	"0.001131"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61566"	"1487.83243"	"1487.83324"	"-0.55"	"-0.00027"	"9/66"	"9"	"66"	"24698131.5895996"	"HCD"	"MS2"	"7.539577"	"344.8"	"61.399"	"51.0140"	"15252"	"15252"	"15234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"331.9"	""	"333.4"	""	"379.2"	""	"708.1"	"4.6"	"794.0"	"729.5"	""	"886"	"27"	"36.000"	"29.000"	"0.0798736859200789"	"14"	"0.0001889"	"0.0009482"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61566"	"1487.83243"	"1487.83324"	"-0.55"	"-0.00027"	"6/66"	"6"	"66"	"22301743.2401733"	"HCD"	"MS2"	"8.054429"	"376.4"	"69.851"	"51.6455"	"15510"	"15510"	"15490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.0"	""	"336.8"	""	"420.4"	""	"807.3"	""	"848.7"	"804.5"	""	"886"	"33"	"36.000"	"29.000"	"0.0236267358701016"	"15"	"0.0002277"	"0.001176"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41986"	"1487.83245"	"1487.83324"	"-0.54"	"-0.00040"	"7/66"	"7"	"66"	"45908468.2392578"	"HCD"	"MS2"	"6.320112"	"453.5"	"17.939"	"47.7008"	"13955"	"13955"	"13938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"443.5"	"2.3"	"438.7"	""	"508.5"	""	"941.2"	"0.7"	"989.6"	"989.3"	""	"886"	"42"	"36.000"	"29.000"	"0.00254333592757846"	"15"	"0.001686"	"0.02308"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61569"	"1487.83252"	"1487.83324"	"-0.48"	"-0.00024"	"11/66"	"11"	"66"	"36595287.0270996"	"HCD"	"MS2"	"6.219053"	"418.4"	"49.636"	"48.5200"	"14289"	"14289"	"14271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"382.3"	""	"399.0"	""	"488.2"	""	"892.9"	"0.0"	"919.5"	"898.2"	""	"901"	"23"	"36.000"	"29.000"	"0.224747461600735"	"14"	"0.0001889"	"0.001011"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61569"	"1487.83252"	"1487.83324"	"-0.48"	"-0.00024"	"9/66"	"9"	"66"	"30698541.6726074"	"HCD"	"MS2"	"2.977223"	"373.4"	"54.771"	"49.4984"	"14642"	"14642"	"14623"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"354.2"	""	"373.8"	""	"423.3"	""	"795.4"	"5.0"	"808.8"	"789.8"	""	"901"	"28"	"36.000"	"29.000"	"0.0768590116245907"	"14"	"0.0001889"	"0.001021"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41992"	"1487.83257"	"1487.83324"	"-0.45"	"-0.00034"	"7/66"	"7"	"66"	"24698426.8774414"	"HCD"	"MS2"	"0.9222717"	"467.2"	"31.584"	"51.1270"	"15299"	"15299"	"15282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.7"	""	"424.3"	""	"532.3"	""	"985.6"	"7.8"	"1024.4"	"1031.2"	""	"901"	"42"	"36.000"	"29.000"	"0.00262237499605777"	"15"	"0.0007076"	"0.007098"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41992"	"1487.83257"	"1487.83324"	"-0.45"	"-0.00034"	"7/66"	"7"	"66"	"18211917.2484131"	"HCD"	"MS2"	"0"	"570.2"	"54.473"	"52.3788"	"15811"	"15811"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"581.4"	""	"552.9"	""	"653.3"	""	"1193.0"	"3.1"	"1220.8"	"1215.9"	""	"901"	"39"	"36.000"	"29.000"	"0.00560653832603009"	"15"	"0.0007076"	"0.006844"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61572"	"1487.83261"	"1487.83324"	"-0.42"	"-0.00021"	"7/66"	"7"	"66"	"34175159.684082"	"HCD"	"MS2"	"4.846453"	"243.6"	"27.412"	"45.4876"	"13054"	"13054"	"13035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"215.5"	""	"226.5"	""	"275.5"	""	"540.6"	"0.4"	"535.4"	"523.4"	""	"901"	"25"	"36.000"	"29.000"	"0.158377978457998"	"14"	"0.0004557"	"0.00257"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"496.61572"	"1487.83261"	"1487.83324"	"-0.42"	"-0.00021"	"11/66"	"11"	"66"	"78919265.0976563"	"HCD"	"MS2"	"13.62114"	"264.5"	"13.046"	"45.1679"	"12924"	"12924"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.3"	""	"232.8"	""	"279.2"	""	"635.6"	""	"587.3"	"564.7"	""	"901"	"24"	"36.000"	"29.000"	"0.191732085116751"	"17"	"0.0004166"	"0.002452"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61572"	"1487.83261"	"1487.83324"	"-0.42"	"-0.00021"	"8/66"	"8"	"66"	"31196666.7850342"	"HCD"	"MS2"	"23.13759"	"303.2"	"38.531"	"50.7012"	"15124"	"15124"	"15106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"327.5"	""	"297.5"	""	"350.1"	""	"609.9"	""	"658.7"	"640.9"	""	"901"	"22"	"36.000"	"29.000"	"0.27586385147201"	"14"	"0.0001889"	"0.0008484"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41998"	"1487.83269"	"1487.83324"	"-0.37"	"-0.00028"	"7/66"	"7"	"66"	"33422370.4658203"	"HCD"	"MS2"	"0"	"393.0"	"19.987"	"46.1404"	"13316"	"13316"	"13296"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"345.2"	""	"385.4"	""	"431.5"	""	"833.2"	""	"904.7"	"841.6"	""	"901"	"42"	"36.000"	"29.000"	"0.0025626824534515"	"15"	"0.0008731"	"0.009044"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41998"	"1487.83269"	"1487.83324"	"-0.37"	"-0.00028"	"7/66"	"7"	"66"	"32394320.8010254"	"HCD"	"MS2"	"0"	"464.8"	"25.953"	"48.0914"	"14066"	"14066"	"14050"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"433.0"	""	"443.5"	""	"514.6"	""	"989.6"	"1.3"	"1027.1"	"1013.1"	""	"901"	"41"	"36.000"	"29.000"	"0.00360325331880666"	"15"	"0.0009404"	"0.01025"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41998"	"1487.83269"	"1487.83324"	"-0.37"	"-0.00028"	"7/66"	"7"	"66"	"20561446.8474121"	"HCD"	"MS2"	"28.1895"	"356.5"	"27.530"	"46.1630"	"13277"	"13277"	"13260"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"335.2"	""	"400.5"	""	"429.7"	""	"664.5"	""	"835.7"	"732.2"	""	"901"	"4"	"36.000"	"29.000"	"17.6479715637056"	"13"	"0.00862"	"0.3661"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41998"	"1487.83269"	"1487.83324"	"-0.37"	"-0.00028"	"7/66"	"7"	"66"	"32381913.5189209"	"HCD"	"MS2"	"1.002365"	"568.0"	"29.955"	"48.2955"	"14198"	"14198"	"14186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"540.5"	""	"542.0"	""	"625.2"	""	"1216.9"	"5.9"	"1219.0"	"1252.5"	""	"901"	"41"	"36.000"	"29.000"	"0.00366180147531927"	"15"	"0.0008453"	"0.007981"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41998"	"1487.83269"	"1487.83324"	"-0.37"	"-0.00028"	"7/66"	"7"	"66"	"21026775.0163574"	"HCD"	"MS2"	"4.275571"	"492.2"	"40.296"	"52.2664"	"15815"	"15815"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"478.3"	""	"451.9"	""	"582.2"	""	"1076.6"	""	"1025.5"	"1066.8"	""	"901"	"42"	"36.000"	"29.000"	"0.00262842019475322"	"15"	"0.0006037"	"0.00471"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41998"	"1487.83269"	"1487.83324"	"-0.37"	"-0.00028"	"7/66"	"7"	"66"	"36362529.5838623"	"HCD"	"MS2"	"4.206697"	"635.5"	"31.703"	"47.4810"	"13817"	"13817"	"13800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"622.8"	""	"601.8"	""	"709.5"	""	"1372.8"	"3.7"	"1366.9"	"1365.2"	""	"901"	"41"	"36.000"	"29.000"	"0.00397827495138562"	"15"	"0.00103"	"0.01143"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61575"	"1487.83271"	"1487.83324"	"-0.36"	"-0.00018"	"9/66"	"9"	"66"	"42916432.0837402"	"HCD"	"MS2"	"5.931312"	"305.3"	"29.335"	"47.6050"	"13867"	"13867"	"13848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"278.1"	""	"296.7"	""	"365.1"	""	"640.8"	"0.3"	"658.5"	"663.4"	""	"901"	"26"	"36.000"	"29.000"	"0.11238149244878"	"14"	"0.0003571"	"0.001513"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61575"	"1487.83271"	"1487.83324"	"-0.36"	"-0.00018"	"9/66"	"9"	"66"	"34598441.4458008"	"HCD"	"MS2"	"4.528206"	"320.0"	"40.574"	"48.2475"	"14130"	"14130"	"14112"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.0"	""	"307.5"	""	"364.6"	""	"683.1"	""	"695.9"	"695.2"	""	"901"	"29"	"36.000"	"29.000"	"0.0630514088818964"	"14"	"0.0001889"	"0.0009786"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61575"	"1487.83271"	"1487.83324"	"-0.36"	"-0.00018"	"8/66"	"8"	"66"	"27234960.2055664"	"HCD"	"MS2"	"42.77093"	"353.3"	"44.686"	"52.5815"	"15893"	"15893"	"15874"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.0"	""	"393.1"	""	"432.6"	""	"697.6"	""	"745.5"	"728.3"	""	"901"	"20"	"36.000"	"29.000"	"0.427262517717054"	"14"	"0.0003839"	"0.001603"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61578"	"1487.83280"	"1487.83324"	"-0.30"	"-0.00015"	"9/66"	"9"	"66"	"26977987.5649414"	"HCD"	"MS2"	"7.264717"	"303.0"	"46.483"	"51.8751"	"15655"	"15655"	"15638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.3"	""	"310.4"	""	"330.2"	""	"618.0"	""	"653.2"	"679.9"	""	"901"	"28"	"36.000"	"29.000"	"0.0758044664512245"	"14"	"0.0001889"	"0.0008631"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42004"	"1487.83281"	"1487.83324"	"-0.29"	"-0.00022"	"8/66"	"8"	"66"	"684203.461608887"	"HCD"	"MS2"	"0"	"62.3"	"100.000"	"43.8228"	"12326"	"12326"	"12303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.2"	""	"63.3"	""	"63.6"	""	"173.7"	""	"127.0"	"114.2"	""	"901"	"27"	"36.000"	"29.000"	"0.0886532773512933"	"14"	"0.0009404"	"0.009698"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42004"	"1487.83281"	"1487.83324"	"-0.29"	"-0.00022"	"7/66"	"7"	"66"	"26353435.3977051"	"HCD"	"MS2"	"0"	"687.3"	"44.676"	"45.9292"	"13182"	"13182"	"13165"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"625.5"	""	"610.8"	""	"731.5"	""	"1444.4"	"11.6"	"1614.3"	"1506.3"	""	"901"	"44"	"36.000"	"29.000"	"0.0016660759499101"	"15"	"0.0006037"	"0.005971"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42004"	"1487.83281"	"1487.83324"	"-0.29"	"-0.00022"	"7/66"	"7"	"66"	"21725482.1347656"	"HCD"	"MS2"	"1.52659"	"560.2"	"46.200"	"51.9577"	"15688"	"15688"	"15670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"552.4"	""	"543.3"	""	"632.2"	""	"1180.9"	"7.7"	"1201.3"	"1209.2"	""	"901"	"42"	"36.000"	"29.000"	"0.0026103262774031"	"15"	"0.0006037"	"0.005987"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61581"	"1487.83289"	"1487.83324"	"-0.24"	"-0.00012"	"9/66"	"9"	"66"	"40216003.9327393"	"HCD"	"MS2"	"6.254538"	"306.7"	"33.129"	"49.1455"	"14545"	"14545"	"14527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.7"	""	"288.1"	""	"342.9"	""	"648.4"	""	"656.7"	"678.6"	""	"901"	"22"	"36.000"	"29.000"	"0.25567884473655"	"14"	"0.0001889"	"0.001019"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"496.61581"	"1487.83289"	"1487.83324"	"-0.24"	"-0.00012"	"9/66"	"9"	"66"	"40459686.1535645"	"HCD"	"MS2"	"2.638683"	"275.7"	"29.179"	"49.1789"	"14512"	"14512"	"14495"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.9"	""	"274.8"	""	"315.6"	""	"580.0"	"0.0"	"587.7"	"608.8"	""	"901"	"22"	"36.000"	"29.000"	"0.277137181155795"	"21"	"0.0002277"	"0.001281"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61581"	"1487.83289"	"1487.83324"	"-0.24"	"-0.00012"	"7/66"	"7"	"66"	"23937616.6397705"	"HCD"	"MS2"	"10.35185"	"431.0"	"70.910"	"52.1880"	"15783"	"15783"	"15766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.4"	""	"429.2"	""	"509.6"	""	"910.8"	""	"899.9"	"925.2"	""	"901"	"18"	"36.000"	"29.000"	"0.654176283723277"	"14"	"0.0001889"	"0.001028"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42010"	"1487.83293"	"1487.83324"	"-0.21"	"-0.00016"	"7/66"	"7"	"66"	"26175053.8830566"	"HCD"	"MS2"	"0"	"555.4"	"38.069"	"51.3269"	"15431"	"15431"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"537.4"	""	"544.9"	""	"603.6"	""	"1184.6"	""	"1194.1"	"1222.6"	""	"901"	"41"	"36.000"	"29.000"	"0.00361155967556149"	"15"	"0.0006037"	"0.005649"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42010"	"1487.83293"	"1487.83324"	"-0.21"	"-0.00016"	"7/66"	"7"	"66"	"38350045.3972168"	"HCD"	"MS2"	"0.3779779"	"615.9"	"29.158"	"46.7666"	"13572"	"13572"	"13554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"583.5"	""	"585.2"	""	"694.6"	""	"1298.6"	"7.6"	"1361.2"	"1327.8"	""	"901"	"42"	"36.000"	"29.000"	"0.00254504107152942"	"15"	"0.001058"	"0.01348"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61584"	"1487.83298"	"1487.83324"	"-0.18"	"-0.00009"	"12/66"	"12"	"66"	"27352865.5391846"	"HCD"	"MS2"	"3.143421"	"263.6"	"39.126"	"45.2715"	"12917"	"12917"	"12896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.9"	""	"261.7"	""	"300.2"	""	"560.9"	"2.1"	"568.8"	"556.8"	""	"901"	"27"	"36.000"	"29.000"	"0.0872358094757946"	"14"	"0.0001889"	"0.0009706"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61584"	"1487.83298"	"1487.83324"	"-0.18"	"-0.00009"	"11/66"	"11"	"66"	"59226086.0197754"	"HCD"	"MS2"	"32.93402"	"1422.8"	"100.000"	"44.3164"	"12577"	"12577"	"12556"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1132.9"	""	"1156.2"	""	"1305.7"	""	"3989.6"	""	"3169.3"	"2886.8"	""	"901"	"22"	"36.000"	"29.000"	"0.30668659609153"	"14"	"0.0003839"	"0.001832"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42017"	"1487.83306"	"1487.83324"	"-0.13"	"-0.00009"	"7/66"	"7"	"66"	"42542910.526123"	"HCD"	"MS2"	"0.2736247"	"417.0"	"17.941"	"49.4996"	"14687"	"14687"	"14670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"401.7"	""	"414.4"	""	"489.3"	""	"881.6"	"4.1"	"893.6"	"880.0"	""	"902"	"42"	"36.000"	"29.000"	"0.00258926524455505"	"15"	"0.0008731"	"0.009169"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42017"	"1487.83306"	"1487.83324"	"-0.13"	"-0.00009"	"7/66"	"7"	"66"	"37537805.6086426"	"HCD"	"MS2"	"1.295134"	"499.8"	"23.704"	"48.5937"	"14320"	"14320"	"14303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"494.8"	""	"468.0"	""	"545.6"	""	"1061.4"	"1.1"	"1085.1"	"1097.8"	""	"902"	"42"	"36.000"	"29.000"	"0.00259523411739058"	"15"	"0.00103"	"0.01137"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42017"	"1487.83306"	"1487.83324"	"-0.13"	"-0.00009"	"7/66"	"7"	"66"	"34596474.8920898"	"HCD"	"MS2"	"0.2955131"	"495.6"	"25.083"	"48.7097"	"14320"	"14320"	"14303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.6"	""	"469.7"	""	"541.7"	""	"1077.2"	""	"1083.6"	"1083.7"	""	"902"	"44"	"36.000"	"29.000"	"0.00166408896955138"	"15"	"0.0008453"	"0.008175"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42017"	"1487.83306"	"1487.83324"	"-0.13"	"-0.00009"	"7/66"	"7"	"66"	"18815659.3936768"	"HCD"	"MS2"	"0.619572"	"429.6"	"40.016"	"52.8925"	"16071"	"16071"	"16054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"429.0"	""	"421.2"	""	"504.7"	""	"909.2"	"2.6"	"896.4"	"919.6"	""	"902"	"42"	"36.000"	"29.000"	"0.00262528551214663"	"15"	"0.0006037"	"0.005443"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61588"	"1487.83307"	"1487.83324"	"-0.12"	"-0.00006"	"9/66"	"9"	"66"	"63367393.2399902"	"HCD"	"MS2"	"12.59145"	"290.8"	"18.664"	"44.9474"	"12785"	"12785"	"12768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.7"	""	"262.9"	""	"295.3"	""	"704.3"	""	"644.2"	"624.9"	""	"902"	"25"	"36.000"	"29.000"	"0.139693610394668"	"14"	"0.0002277"	"0.001292"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"496.61591"	"1487.83316"	"1487.83324"	"-0.05"	"-0.00003"	"6/66"	"6"	"66"	"48015131.3759766"	"HCD"	"MS2"	"4.158896"	"248.9"	"22.548"	"49.4672"	"14673"	"14673"	"14654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.8"	""	"247.3"	""	"284.1"	""	"507.3"	""	"542.6"	"553.9"	""	"902"	"23"	"36.000"	"29.000"	"0.251870057826311"	"22"	"0.0003839"	"0.001717"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61591"	"1487.83316"	"1487.83324"	"-0.05"	"-0.00003"	"9/66"	"9"	"66"	"22761497.1012573"	"HCD"	"MS2"	"2.898223"	"434.2"	"78.091"	"51.3322"	"15382"	"15382"	"15362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"416.1"	""	"419.3"	""	"486.0"	""	"903.8"	"2.0"	"952.8"	"950.3"	""	"902"	"26"	"36.000"	"29.000"	"0.113025527311748"	"14"	"0.0001889"	"0.0006339"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42023"	"1487.83318"	"1487.83324"	"-0.04"	"-0.00003"	"7/66"	"7"	"66"	"23339827.9293213"	"HCD"	"MS2"	"0"	"489.3"	"34.697"	"49.6298"	"14692"	"14692"	"14671"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"482.4"	""	"461.6"	""	"568.7"	""	"1046.0"	"1.8"	"1036.6"	"1054.4"	""	"902"	"41"	"36.000"	"29.000"	"0.00377725706239224"	"15"	"0.0006737"	"0.006404"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42023"	"1487.83318"	"1487.83324"	"-0.04"	"-0.00003"	"7/66"	"7"	"66"	"27680153.786377"	"HCD"	"MS2"	"0"	"462.7"	"29.000"	"51.0144"	"15303"	"15303"	"15286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"434.7"	""	"440.9"	""	"525.1"	""	"999.1"	"4.7"	"983.9"	"1011.4"	""	"902"	"42"	"36.000"	"29.000"	"0.00261322342088523"	"15"	"0.001058"	"0.01463"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42023"	"1487.83318"	"1487.83324"	"-0.04"	"-0.00003"	"7/66"	"7"	"66"	"48848346.5385742"	"HCD"	"MS2"	"0.1665341"	"509.2"	"18.538"	"47.3877"	"13827"	"13827"	"13810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"529.9"	""	"495.7"	""	"614.4"	""	"1058.4"	""	"1059.7"	"1082.4"	""	"902"	"41"	"36.000"	"29.000"	"0.0036912761944879"	"15"	"0.0003839"	"0.001707"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42023"	"1487.83318"	"1487.83324"	"-0.04"	"-0.00003"	"7/66"	"7"	"66"	"43438827.3851318"	"HCD"	"MS2"	"0"	"2261.9"	"100.000"	"44.3093"	"12574"	"12574"	"12556"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1912.9"	""	"1839.7"	""	"2063.4"	""	"6246.8"	""	"4951.4"	"4536.3"	""	"902"	"42"	"36.000"	"29.000"	"0.00266180687157502"	"15"	"0.00103"	"0.01209"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42029"	"1487.83330"	"1487.83324"	"0.04"	"0.00003"	"7/66"	"7"	"66"	"26552619.6452637"	"HCD"	"MS2"	"0.7387658"	"433.4"	"29.146"	"51.6400"	"15559"	"15559"	"15542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"404.1"	""	"416.1"	""	"494.5"	""	"912.1"	""	"946.9"	"950.4"	""	"939"	"42"	"36.000"	"29.000"	"0.0026584934620346"	"15"	"0.001007"	"0.01093"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42035"	"1487.83342"	"1487.83324"	"0.12"	"0.00009"	"7/66"	"7"	"66"	"33701142.0563965"	"HCD"	"MS2"	"0"	"450.6"	"23.332"	"49.8157"	"14815"	"14815"	"14798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.7"	""	"437.9"	""	"514.5"	""	"931.8"	"4.5"	"989.3"	"980.5"	""	"957"	"41"	"36.000"	"29.000"	"0.00384487249465818"	"15"	"0.0009404"	"0.009932"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42035"	"1487.83342"	"1487.83324"	"0.12"	"0.00009"	"7/66"	"7"	"66"	"22287786.9592285"	"HCD"	"MS2"	"2.985408"	"496.2"	"39.765"	"52.0661"	"15683"	"15683"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"483.3"	""	"470.7"	""	"574.5"	""	"1041.2"	"1.4"	"1089.6"	"1058.2"	""	"957"	"41"	"36.000"	"29.000"	"0.00423527819304055"	"15"	"0.0006037"	"0.005988"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61600"	"1487.83344"	"1487.83324"	"0.13"	"0.00006"	"9/66"	"9"	"66"	"800290376.609375"	"HCD"	"MS2"	"3.775449"	"246.8"	"1.327"	"44.5870"	"12687"	"12687"	"12675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.9"	""	"188.1"	""	"224.4"	""	"662.8"	"0.5"	"578.3"	"515.6"	""	"956"	"28"	"36.000"	"29.000"	"0.070376537616284"	"14"	"0.0006037"	"0.005035"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"496.61600"	"1487.83344"	"1487.83324"	"0.13"	"0.00006"	"9/66"	"9"	"66"	"44314004.3720703"	"HCD"	"MS2"	"5.814861"	"283.4"	"26.810"	"47.8963"	"14035"	"14035"	"14018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"273.2"	""	"292.0"	""	"317.9"	""	"593.5"	""	"614.8"	"606.0"	""	"956"	"29"	"36.000"	"29.000"	"0.0664397357719983"	"18"	"0.0001889"	"0.0009064"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61600"	"1487.83344"	"1487.83324"	"0.13"	"0.00006"	"9/66"	"9"	"66"	"28062460.0087891"	"HCD"	"MS2"	"3.462351"	"328.4"	"51.393"	"51.2585"	"15402"	"15402"	"15382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"311.6"	""	"329.5"	""	"372.7"	""	"672.9"	"0.2"	"724.8"	"712.0"	""	"956"	"27"	"36.000"	"29.000"	"0.0917123658040399"	"14"	"0.0001889"	"0.0007905"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61600"	"1487.83344"	"1487.83324"	"0.13"	"0.00006"	"9/66"	"9"	"66"	"18798400.5274658"	"HCD"	"MS2"	"4.787443"	"368.2"	"82.139"	"52.2714"	"15766"	"15766"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"342.9"	""	"340.6"	""	"437.7"	""	"798.8"	""	"789.2"	"793.0"	""	"956"	"21"	"36.000"	"29.000"	"0.416320595999007"	"14"	"0.0001889"	"0.0009947"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42041"	"1487.83354"	"1487.83324"	"0.20"	"0.00015"	"7/66"	"7"	"66"	"37841891.5175781"	"HCD"	"MS2"	"1.033635"	"500.0"	"24.189"	"48.3994"	"14193"	"14193"	"14176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"491.4"	""	"443.7"	""	"544.5"	""	"1073.1"	"8.7"	"1094.1"	"1100.7"	""	"956"	"41"	"36.000"	"29.000"	"0.00385858344458945"	"15"	"0.00103"	"0.01177"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42041"	"1487.83354"	"1487.83324"	"0.20"	"0.00015"	"7/66"	"7"	"66"	"26544659.3028564"	"HCD"	"MS2"	"0.6570163"	"556.1"	"36.882"	"51.4402"	"15427"	"15427"	"15410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"525.2"	""	"508.2"	""	"628.3"	""	"1195.7"	""	"1210.3"	"1222.1"	""	"956"	"43"	"36.000"	"29.000"	"0.00259076425611977"	"15"	"0.0008125"	"0.007773"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42041"	"1487.83354"	"1487.83324"	"0.20"	"0.00015"	"7/66"	"7"	"66"	"36273302.894043"	"HCD"	"MS2"	"0"	"575.7"	"29.971"	"46.8546"	"13561"	"13561"	"13544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"544.5"	""	"571.1"	""	"642.9"	""	"1241.1"	""	"1217.9"	"1261.6"	""	"956"	"42"	"36.000"	"29.000"	"0.00271911700943356"	"15"	"0.0007444"	"0.007204"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42041"	"1487.83354"	"1487.83324"	"0.20"	"0.00015"	"7/66"	"7"	"66"	"20107917.0012207"	"HCD"	"MS2"	"2.944781"	"620.8"	"54.281"	"51.7576"	"15556"	"15556"	"15538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"605.8"	""	"584.1"	""	"744.7"	""	"1286.5"	"5.9"	"1340.1"	"1335.9"	""	"956"	"42"	"36.000"	"29.000"	"0.00276966916892049"	"15"	"0.0006037"	"0.00545"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61606"	"1487.83362"	"1487.83324"	"0.25"	"0.00013"	"9/66"	"9"	"66"	"885451642.109375"	"HCD"	"MS2"	"3.874904"	"314.4"	"1.516"	"44.3462"	"12540"	"12540"	"12533"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.5"	""	"243.5"	""	"293.5"	""	"806.8"	"2.2"	"738.6"	"666.1"	""	"953"	"30"	"36.000"	"29.000"	"0.0532185337567437"	"14"	"0.0007793"	"0.00723"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61606"	"1487.83362"	"1487.83324"	"0.25"	"0.00013"	"9/66"	"9"	"66"	"46547615.5998535"	"HCD"	"MS2"	"5.773723"	"301.3"	"28.420"	"46.9574"	"13651"	"13651"	"13634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"294.8"	""	"291.7"	""	"346.1"	""	"627.2"	""	"673.3"	"634.0"	""	"953"	"26"	"36.000"	"29.000"	"0.10766211445103"	"14"	"0.0002277"	"0.001202"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42047"	"1487.83367"	"1487.83324"	"0.28"	"0.00021"	"7/66"	"7"	"66"	"35690913.5849609"	"HCD"	"MS2"	"0"	"481.8"	"23.693"	"49.0223"	"14448"	"14448"	"14431"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.0"	""	"458.8"	""	"542.9"	""	"1011.0"	"13.4"	"1041.7"	"1038.1"	""	"953"	"42"	"36.000"	"29.000"	"0.0027105842154709"	"15"	"0.00103"	"0.01177"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42053"	"1487.83379"	"1487.83324"	"0.37"	"0.00027"	"7/66"	"7"	"66"	"26199320.1843262"	"HCD"	"MS2"	"9.153597"	"599.6"	"38.745"	"50.5018"	"15043"	"15043"	"15026"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"598.0"	""	"598.8"	""	"690.7"	""	"1275.6"	""	"1244.8"	"1295.1"	""	"951"	"44"	"36.000"	"29.000"	"0.00181614500784442"	"15"	"0.0006396"	"0.006218"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61612"	"1487.83380"	"1487.83324"	"0.38"	"0.00019"	"9/66"	"9"	"66"	"41940376.4035645"	"HCD"	"MS2"	"5.455176"	"342.5"	"33.288"	"46.6633"	"13482"	"13482"	"13464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"327.9"	""	"322.8"	""	"391.9"	""	"737.8"	"8.1"	"743.8"	"724.8"	""	"949"	"26"	"36.000"	"29.000"	"0.10820223131642"	"14"	"0.0001889"	"0.001103"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42059"	"1487.83391"	"1487.83324"	"0.45"	"0.00033"	"7/66"	"7"	"66"	"716648022.679688"	"HCD"	"MS2"	"0"	"358.5"	"0.892"	"44.4035"	"12563"	"12563"	"12555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.5"	""	"277.4"	""	"325.3"	""	"952.7"	"2.9"	"809.4"	"764.5"	""	"949"	"42"	"36.000"	"29.000"	"0.00269920715685403"	"15"	"0.00738"	"0.2742"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42059"	"1487.83391"	"1487.83324"	"0.45"	"0.00033"	"7/66"	"7"	"66"	"845155267.976563"	"HCD"	"MS2"	"0.0367012"	"386.3"	"0.838"	"44.5825"	"12686"	"12686"	"12675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"319.2"	""	"286.7"	""	"346.6"	""	"1026.5"	"1.5"	"864.8"	"832.3"	""	"949"	"43"	"36.000"	"29.000"	"0.00261960744938719"	"15"	"0.009459"	"0.4198"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42059"	"1487.83391"	"1487.83324"	"0.45"	"0.00033"	"7/66"	"7"	"66"	"33701107.9611816"	"HCD"	"MS2"	"8.351859"	"527.7"	"26.629"	"47.7936"	"13945"	"13945"	"13928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"516.8"	""	"507.6"	""	"598.3"	""	"1139.8"	""	"1102.7"	"1156.8"	""	"949"	"42"	"36.000"	"29.000"	"0.00276207976832278"	"15"	"0.001058"	"0.01321"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61618"	"1487.83399"	"1487.83324"	"0.50"	"0.00025"	"8/66"	"8"	"66"	"22351705.5578613"	"HCD"	"MS2"	"40.30323"	"267.3"	"47.387"	"52.9412"	"16090"	"16090"	"16070"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"258.2"	"2.4"	"285.1"	""	"321.7"	""	"530.3"	""	"578.7"	"570.9"	""	"949"	"21"	"36.000"	"29.000"	"0.376041881312984"	"14"	"0.0001889"	"0.001074"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"496.61618"	"1487.83399"	"1487.83324"	"0.50"	"0.00025"	"9/66"	"9"	"66"	"48146580.1992188"	"HCD"	"MS2"	"5.292193"	"319.1"	"27.888"	"46.9764"	"13610"	"13610"	"13592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"327.0"	""	"325.7"	""	"363.4"	""	"653.2"	""	"685.6"	"685.6"	""	"949"	"22"	"36.000"	"29.000"	"0.291901426100832"	"18"	"0.0002277"	"0.001279"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"496.61618"	"1487.83399"	"1487.83324"	"0.50"	"0.00025"	"8/66"	"8"	"66"	"49784002.1483154"	"HCD"	"MS2"	"16.56325"	"380.1"	"33.166"	"47.2853"	"13737"	"13737"	"13720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"399.8"	""	"398.1"	""	"478.1"	""	"774.8"	"1.3"	"777.4"	"781.0"	""	"949"	"25"	"36.000"	"29.000"	"0.136532554779207"	"20"	"0.0004166"	"0.002305"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42065"	"1487.83403"	"1487.83324"	"0.53"	"0.00039"	"7/66"	"7"	"66"	"49330755.5812988"	"HCD"	"MS2"	"0"	"527.1"	"19.166"	"45.0257"	"12817"	"12817"	"12800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"500.8"	""	"531.8"	""	"625.8"	""	"1092.8"	"1.9"	"1124.2"	"1133.8"	""	"949"	"41"	"36.000"	"29.000"	"0.00387468335209652"	"15"	"0.00119"	"0.01585"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42065"	"1487.83403"	"1487.83324"	"0.53"	"0.00039"	"7/66"	"7"	"66"	"47112892.3735352"	"HCD"	"MS2"	"14.16226"	"520.6"	"19.206"	"48.0136"	"14083"	"14083"	"14066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"530.3"	""	"508.6"	""	"609.8"	""	"1067.8"	"2.5"	"1120.0"	"1110.2"	""	"949"	"37"	"36.000"	"29.000"	"0.00887638675603572"	"15"	"0.001158"	"0.01523"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42065"	"1487.83403"	"1487.83324"	"0.53"	"0.00039"	"7/66"	"7"	"66"	"39829272.9963379"	"HCD"	"MS2"	"3.429254"	"400.7"	"29.542"	"47.1679"	"13689"	"13689"	"13672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"408.3"	""	"427.8"	""	"480.5"	""	"818.3"	"2.3"	"837.9"	"832.8"	""	"949"	"42"	"36.000"	"29.000"	"0.00283946301856122"	"15"	"0.00103"	"0.01247"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61621"	"1487.83408"	"1487.83324"	"0.56"	"0.00028"	"10/66"	"10"	"66"	"50513679.230957"	"HCD"	"MS2"	"7.652899"	"323.5"	"28.058"	"47.2702"	"13779"	"13779"	"13762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"353.2"	""	"343.0"	""	"400.0"	""	"638.6"	""	"673.9"	"667.2"	""	"949"	"31"	"36.000"	"29.000"	"0.034295427180923"	"14"	"0.0001889"	"0.0009366"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"496.61621"	"1487.83408"	"1487.83324"	"0.56"	"0.00028"	"6/66"	"6"	"66"	"96637785.9991455"	"HCD"	"MS2"	"21.20892"	"1297.9"	"58.586"	"44.0638"	"12424"	"12424"	"12406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1009.1"	""	"1042.6"	""	"1146.0"	""	"3589.0"	""	"2927.0"	"2663.9"	""	"949"	"24"	"36.000"	"29.000"	"0.171094566113769"	"17"	"0.0003839"	"0.001832"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42072"	"1487.83415"	"1487.83324"	"0.61"	"0.00046"	"7/66"	"7"	"66"	"35250601.1323242"	"HCD"	"MS2"	"0"	"547.6"	"28.675"	"48.9062"	"14448"	"14448"	"14431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"515.1"	""	"517.4"	""	"622.4"	""	"1130.8"	"3.3"	"1211.0"	"1209.9"	""	"949"	"42"	"36.000"	"29.000"	"0.00269299915266356"	"15"	"0.00103"	"0.01156"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42078"	"1487.83428"	"1487.83324"	"0.69"	"0.00052"	"7/66"	"7"	"66"	"41682552.5119629"	"HCD"	"MS2"	"0.2139855"	"547.7"	"24.444"	"47.0746"	"13699"	"13699"	"13682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"516.2"	""	"538.4"	""	"616.8"	""	"1188.1"	""	"1160.2"	"1188.4"	""	"953"	"42"	"36.000"	"29.000"	"0.00270435004477173"	"15"	"0.00103"	"0.01245"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42078"	"1487.83428"	"1487.83324"	"0.69"	"0.00052"	"7/66"	"7"	"66"	"35768023.2810059"	"HCD"	"MS2"	"2.928086"	"448.5"	"22.565"	"49.3353"	"14576"	"14576"	"14559"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"441.8"	""	"423.1"	""	"512.8"	""	"946.6"	""	"965.4"	"976.9"	""	"953"	"42"	"36.000"	"29.000"	"0.00275462766588825"	"15"	"0.0009404"	"0.01003"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42078"	"1487.83428"	"1487.83324"	"0.69"	"0.00052"	"7/66"	"7"	"66"	"23251662.1303711"	"HCD"	"MS2"	"0"	"636.4"	"52.516"	"50.8140"	"15171"	"15171"	"15154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"609.0"	""	"602.3"	""	"717.6"	""	"1344.6"	"3.8"	"1369.9"	"1405.7"	""	"953"	"42"	"36.000"	"29.000"	"0.00268573343001067"	"15"	"0.0007793"	"0.007399"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42096"	"1487.83464"	"1487.83324"	"0.94"	"0.00070"	"7/66"	"7"	"66"	"240258561.785156"	"HCD"	"MS2"	"0.07517768"	"457.7"	"3.406"	"44.7130"	"12689"	"12689"	"12673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"331.1"	""	"355.5"	""	"462.2"	""	"1123.8"	"0.6"	"1043.8"	"1042.5"	""	"954"	"44"	"36.000"	"29.000"	"0.00172392504479096"	"15"	"0.003788"	"0.09098"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42096"	"1487.83464"	"1487.83324"	"0.94"	"0.00070"	"7/66"	"7"	"66"	"33204987.918335"	"HCD"	"MS2"	"0"	"648.2"	"36.167"	"49.2168"	"14575"	"14575"	"14558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"649.1"	""	"619.2"	""	"733.7"	""	"1394.5"	"9.0"	"1385.7"	"1371.4"	""	"954"	"42"	"36.000"	"29.000"	"0.00273853552472896"	"15"	"0.00103"	"0.01295"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42114"	"1487.83501"	"1487.83324"	"1.19"	"0.00088"	"7/66"	"7"	"66"	"32248939.5787354"	"HCD"	"MS2"	"0.2626555"	"620.1"	"34.599"	"46.5415"	"13433"	"13433"	"13416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"562.0"	""	"570.5"	""	"683.5"	""	"1318.6"	"3.3"	"1375.0"	"1387.5"	""	"961"	"42"	"36.000"	"29.000"	"0.00270827893624371"	"15"	"0.00103"	"0.01169"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.61664"	"1487.83536"	"1487.83324"	"1.42"	"0.00071"	"9/66"	"9"	"66"	"421761481.128906"	"HCD"	"MS2"	"3.710007"	"308.9"	"3.012"	"44.8644"	"12800"	"12800"	"12784"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.7"	""	"223.7"	""	"291.5"	""	"767.3"	""	"734.9"	"704.1"	""	"947"	"24"	"36.000"	"29.000"	"0.182104208798475"	"14"	"0.001058"	"0.01355"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"496.61673"	"1487.83564"	"1487.83324"	"1.61"	"0.00080"	"8/66"	"8"	"66"	"52596143.9338379"	"HCD"	"MS2"	"16.91349"	"366.0"	"29.459"	"47.5836"	"13907"	"13907"	"13890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"382.7"	""	"386.4"	"3.0"	"435.3"	""	"735.3"	""	"760.7"	"775.9"	""	"948"	"22"	"36.000"	"29.000"	"0.306745599864828"	"17"	"0.0003839"	"0.001838"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42163"	"1487.83599"	"1487.83324"	"1.84"	"0.00137"	"7/66"	"7"	"66"	"255776019.855469"	"HCD"	"MS2"	"0.09984436"	"474.5"	"3.605"	"44.9333"	"12828"	"12828"	"12811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"382.1"	""	"354.5"	""	"437.7"	""	"1164.3"	""	"1120.4"	"1063.0"	""	"951"	"42"	"36.000"	"29.000"	"0.00269246781937689"	"15"	"0.004377"	"0.1279"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42181"	"1487.83635"	"1487.83324"	"2.09"	"0.00155"	"7/66"	"7"	"66"	"622216299.041016"	"HCD"	"MS2"	"0"	"670.1"	"1.943"	"44.1376"	"12455"	"12455"	"12438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"544.9"	"2.7"	"522.8"	""	"617.8"	""	"1802.8"	"12.9"	"1492.2"	"1380.8"	""	"933"	"43"	"36.000"	"29.000"	"0.00261728880819147"	"15"	"0.008863"	"0.3944"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"496.61722"	"1487.83710"	"1487.83324"	"2.59"	"0.00129"	"9/66"	"9"	"66"	"385813524.396484"	"HCD"	"MS2"	"3.787484"	"326.9"	"3.459"	"44.6373"	"12658"	"12658"	"12646"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.4"	""	"243.3"	""	"313.6"	""	"814.9"	""	"756.0"	"722.3"	""	"928"	"29"	"36.000"	"29.000"	"0.0610264322137198"	"18"	"0.0006037"	"0.006192"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETFSGVYK"	"[K].vETFSGVYk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.42810"	"1487.84892"	"1487.85100"	"-1.40"	"-0.00104"	"12/70"	"12"	"70"	"2656153.7097168"	"HCD"	"MS2"	"0"	"250.7"	"100.000"	"42.9645"	"11984"	"11984"	"11966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"406.0"	""	"489.3"	""	"478.1"	""	"388.8"	""	"322.3"	"279.8"	""	"933"	"31"	"36.000"	"29.000"	"0.0331781104119278"	"14"	"0.0001308"	"0.0002316"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETFSGVYK"	"[K].vETFSGVYk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"744.42853"	"1487.84978"	"1487.85100"	"-0.82"	"-0.00061"	"8/70"	"8"	"70"	"2923907.29119873"	"HCD"	"MS2"	"0"	"265.0"	"100.000"	"43.2253"	"12136"	"12136"	"12116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"422.2"	""	"524.4"	""	"522.2"	""	"419.6"	""	"332.5"	"274.6"	""	"945"	"54"	"36.000"	"29.000"	"0.000192487181262443"	"19"	"0"	"8.433E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLIEWLNK"	"[R].nLIEWLNk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP52"	"Carboxymethylenebutenolidase homolog OS=Rattus norvegicus OX=10116 GN=Cmbl PE=2 SV=1"	"Q7TP52"	"Carboxymethylenebutenolidase homolog OS=Rattus norvegicus OX=10116 GN=Cmbl PE=2 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"744.45331"	"1487.89934"	"1487.89862"	"0.48"	"0.00036"	"6/70"	"6"	"70"	"1267950.15374756"	"HCD"	"MS2"	"46.13675"	"95.4"	"100.000"	"68.1713"	"22229"	"22229"	"22202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.5"	""	"118.0"	""	"137.9"	""	"158.9"	""	"156.5"	"200.0"	""	"652"	"23"	"35.000"	"28.000"	"0.147984967027966"	"19"	"0.0001889"	"0.0004185"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEETLALK"	"[R].iIEETLALk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"496.65283"	"1487.94394"	"1487.94490"	"-0.64"	"-0.00032"	"10/68"	"10"	"68"	"8249002.17730713"	"HCD"	"MS2"	"19.68515"	"220.1"	"100.000"	"62.2362"	"19866"	"19866"	"19843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.0"	""	"318.5"	""	"320.7"	""	"359.7"	""	"387.9"	"421.7"	""	"415"	"33"	"33.000"	"26.000"	"0.00950644414932657"	"26"	"0.0001889"	"0.000451"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEETLALK"	"[R].iIEETLALk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"496.65289"	"1487.94413"	"1487.94490"	"-0.52"	"-0.00026"	"10/68"	"10"	"68"	"1505493.7789917"	"HCD"	"MS2"	"35.88113"	"44.0"	"100.000"	"62.4292"	"19892"	"19892"	"19865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.0"	""	"58.8"	""	"55.2"	""	"73.5"	"1.8"	"85.8"	"89.7"	""	"415"	"14"	"33.000"	"26.000"	"0.794361342382407"	"15"	"0.005353"	"0.1684"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEETLALK"	"[R].iIEETLALk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"744.47583"	"1487.94438"	"1487.94490"	"-0.35"	"-0.00026"	"16/68"	"16"	"68"	"7802364.42346191"	"HCD"	"MS2"	"26.63141"	"540.0"	"100.000"	"62.0631"	"19742"	"19742"	"19721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"687.6"	""	"756.5"	""	"790.4"	""	"863.7"	""	"983.7"	"1035.6"	""	"415"	"57"	"33.000"	"26.000"	"3.71550714712324E-05"	""	"0"	"0.0001598"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEETLALK"	"[R].iIEETLALk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"3"	"3"	"0.6579"	"0.0000"	"1"	"1"	"1"	"496.65298"	"1487.94440"	"1487.94490"	"-0.34"	"-0.00017"	"10/68"	"10"	"68"	"7678008.27520752"	"HCD"	"MS2"	"21.84808"	"222.4"	"100.000"	"62.1022"	"19758"	"19758"	"19737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.3"	""	"329.9"	""	"309.7"	""	"379.2"	"0.0"	"379.9"	"437.8"	""	"415"	"38"	"33.000"	"26.000"	"0.0036142492622876"	""	"0.0001889"	"0.0004112"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEETLALK"	"[R].iIEETLALk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"744.47662"	"1487.94597"	"1487.94490"	"0.72"	"0.00053"	"16/68"	"16"	"68"	"7770230.45404053"	"HCD"	"MS2"	"29.63294"	"520.6"	"100.000"	"62.1904"	"19847"	"19847"	"19827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"665.4"	""	"753.6"	""	"780.0"	""	"836.6"	""	"915.6"	"985.4"	""	"403"	"58"	"33.000"	"26.000"	"3.45362397462948E-05"	""	"0.0001859"	"0.0003187"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSTVAQAVK"	"[K].lLSTVAQAVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"744.48199"	"1487.95671"	"1487.95614"	"0.39"	"0.00029"	"9/80"	"9"	"80"	"1917673.52264404"	"HCD"	"MS2"	"32.94794"	"156.0"	"100.000"	"56.9956"	"17731"	"17731"	"17701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.6"	""	"200.9"	""	"211.9"	""	"283.9"	""	"284.8"	"294.0"	""	"313"	"64"	"31.000"	"24.000"	"6.28802618978591E-06"	""	"0"	"6.681E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANTIGISLIK"	"[K].aNTIGISLIk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.65710"	"1487.95676"	"1487.95614"	"0.42"	"0.00021"	"7/96"	"7"	"96"	"988737.340087891"	"HCD"	"MS2"	"52.72193"	"40.5"	"100.000"	"60.0964"	"18993"	"18993"	"18964"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.3"	""	"49.4"	""	"56.0"	""	"73.6"	""	"83.6"	"76.1"	""	"313"	"5"	"31.000"	"24.000"	"5.55282954150545"	"13"	"0.00385"	"0.09775"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSTVAQAVK"	"[K].lLSTVAQAVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"0"	"2"	"2"	"0.7455"	"0.0000"	"1"	"1"	"1"	"744.48267"	"1487.95806"	"1487.95614"	"1.29"	"0.00096"	"15/80"	"15"	"80"	"1919525.42987061"	"HCD"	"MS2"	"39.48308"	"161.8"	"100.000"	"56.7860"	"17591"	"17591"	"17563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.9"	"2.3"	"223.8"	""	"226.2"	""	"279.3"	""	"301.2"	"312.1"	""	"325"	"55"	"32.000"	"25.000"	"5.66048136933519E-05"	""	"0"	"4.32E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQGGVGIPHIR"	"[K].iLQGGVGIPHIR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"496.97864"	"1488.92136"	"1488.92120"	"0.11"	"0.00005"	"8/108"	"8"	"108"	"3234682.31555176"	"HCD"	"MS2"	"31.22772"	"117.0"	"100.000"	"43.8916"	"12354"	"12354"	"12327"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.4"	""	"146.1"	""	"152.8"	""	"227.2"	""	"233.1"	"218.6"	""	"554"	"35"	"34.000"	"27.000"	"0.0093643959629057"	"20"	"0"	"3.214E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSALLDGK"	"[K].lTLSALLDGk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"744.97278"	"1488.93828"	"1488.94015"	"-1.26"	"-0.00094"	"11/84"	"11"	"84"	"511088.44140625"	"HCD"	"MS2"	"25.87273"	"39.5"	"100.000"	"72.0753"	"23823"	"23823"	"23793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.1"	""	"47.2"	""	"54.3"	""	"72.3"	""	"76.1"	"81.2"	""	"464"	"20"	"33.000"	"26.000"	"0.241261478472342"	"16"	"0"	"0.0001825"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSALLDGK"	"[K].lTLSALLDGk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"496.98438"	"1488.93857"	"1488.94015"	"-1.06"	"-0.00053"	"9/84"	"9"	"84"	"4566016.55218506"	"HCD"	"MS2"	"14.23733"	"137.7"	"100.000"	"71.6375"	"23695"	"23695"	"23674"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.4"	""	"190.6"	""	"215.7"	""	"235.2"	""	"238.5"	"279.7"	""	"464"	"36"	"33.000"	"26.000"	"0.00636045207887269"	"22"	"0.0001889"	"0.0005515"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLSTLGELK"	"[R].lGLSTLGELk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"496.98450"	"1488.93894"	"1488.94015"	"-0.81"	"-0.00040"	"8/80"	"8"	"80"	"2307830.29528809"	"HCD"	"MS2"	"16.05542"	"83.5"	"100.000"	"60.4401"	"19133"	"19133"	"19107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.1"	""	"88.2"	""	"104.7"	""	"168.8"	"0.1"	"179.3"	"158.5"	""	"460"	"40"	"33.000"	"26.000"	"0.00249303190224877"	"24"	"0.0001889"	"0.0003799"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSALLDGK"	"[K].lTLSALLDGk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"496.98459"	"1488.93921"	"1488.94015"	"-0.63"	"-0.00031"	"9/84"	"9"	"84"	"4452268.40606689"	"HCD"	"MS2"	"6.793927"	"136.2"	"100.000"	"71.7174"	"23676"	"23676"	"23651"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.8"	""	"192.3"	""	"197.6"	""	"234.7"	""	"234.2"	"286.0"	""	"460"	"37"	"33.000"	"26.000"	"0.0042240381897012"	"23"	"0.0001889"	"0.0005259"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLSTLGELK"	"[R].lGLSTLGELk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"744.97339"	"1488.93950"	"1488.94015"	"-0.44"	"-0.00033"	"9/80"	"9"	"80"	"2133736.14160156"	"HCD"	"MS2"	"9.969535"	"125.8"	"100.000"	"60.4545"	"19085"	"19085"	"19065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.0"	""	"137.7"	""	"160.9"	""	"226.0"	"1.4"	"238.7"	"236.1"	""	"460"	"25"	"33.000"	"26.000"	"0.0786552717781531"	"26"	"0"	"0.0001218"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLSTLGELK"	"[R].lGLSTLGELk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"496.98489"	"1488.94013"	"1488.94015"	"-0.02"	"-0.00001"	"8/80"	"8"	"80"	"2381469.35327148"	"HCD"	"MS2"	"23.07306"	"83.6"	"100.000"	"60.2836"	"19016"	"19016"	"18985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.8"	""	"79.7"	""	"100.4"	""	"171.2"	"0.9"	"185.3"	"174.5"	""	"426"	"50"	"33.000"	"26.000"	"0.000231942109880021"	"25"	"0"	"0.0001746"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSALLDGK"	"[K].lTLSALLDGk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"744.97382"	"1488.94036"	"1488.94015"	"0.14"	"0.00010"	"9/84"	"9"	"84"	"2476497.85595703"	"HCD"	"MS2"	"20.2148"	"172.5"	"100.000"	"71.5984"	"23679"	"23679"	"23658"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.2"	""	"261.4"	""	"276.2"	""	"266.5"	"0.2"	"275.5"	"350.2"	""	"427"	"69"	"33.000"	"26.000"	"2.88667492241978E-06"	"26"	"0"	"1.867E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLSTLGELK"	"[R].lGLSTLGELk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"744.97388"	"1488.94048"	"1488.94015"	"0.22"	"0.00016"	"15/80"	"15"	"80"	"2265206.52209473"	"HCD"	"MS2"	"27.67907"	"192.1"	"100.000"	"60.1522"	"18962"	"18962"	"18937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.6"	""	"219.4"	""	"226.6"	""	"381.6"	"1.1"	"392.8"	"379.5"	""	"427"	"53"	"33.000"	"26.000"	"0.000110254894839587"	""	"0"	"2.67E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSALLDGK"	"[K].lTLSALLDGk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8806"	"0.0000"	"1"	"1"	"1"	"744.97394"	"1488.94060"	"1488.94015"	"0.30"	"0.00022"	"9/84"	"9"	"84"	"2116466.70751953"	"HCD"	"MS2"	"24.89561"	"155.0"	"100.000"	"71.6643"	"23654"	"23654"	"23635"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.5"	""	"233.2"	""	"234.2"	""	"232.8"	"1.9"	"263.6"	"298.9"	""	"427"	"67"	"33.000"	"26.000"	"4.7577090436921E-06"	"25"	"0"	"1.646E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLSALLDGK"	"[K].lTLSALLDGk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"496.98517"	"1488.94095"	"1488.94015"	"0.54"	"0.00027"	"6/84"	"6"	"84"	"1060865.31530762"	"HCD"	"MS2"	"66.72701"	"37.1"	"100.000"	"71.9471"	"23822"	"23822"	"23793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.8"	""	"41.4"	""	"48.1"	""	"74.9"	"0.9"	"78.0"	"76.7"	""	"427"	"21"	"33.000"	"26.000"	"0.175145054714416"	"14"	"0.0004166"	"0.002177"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLSTLGELK"	"[R].lGLSTLGELk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"744.97449"	"1488.94170"	"1488.94015"	"1.04"	"0.00077"	"8/80"	"8"	"80"	"2722102.48651123"	"HCD"	"MS2"	"17.87638"	"215.9"	"100.000"	"60.3134"	"19081"	"19081"	"19059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.4"	""	"222.6"	""	"239.3"	""	"460.5"	""	"439.5"	"430.5"	""	"429"	"51"	"33.000"	"26.000"	"0.000157190862358295"	""	"0"	"5.999E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLFLGDYVDR"	"[R].yLFLGDYVDR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.39661"	"1489.78594"	"1489.78885"	"-1.95"	"-0.00146"	"7/78"	"7"	"78"	"791929.473266602"	"HCD"	"MS2"	"0"	"64.6"	"100.000"	"65.0155"	"21001"	"21001"	"20979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.9"	""	"90.0"	""	"83.0"	""	"105.4"	""	"126.4"	"126.7"	""	"832"	"35"	"36.000"	"29.000"	"0.0127084718309765"	"15"	"0.0001308"	"0.0002204"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLFLGDYVDR"	"[R].yLFLGDYVDR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.39728"	"1489.78728"	"1489.78885"	"-1.05"	"-0.00078"	"8/78"	"8"	"78"	"3357557.64337158"	"HCD"	"MS2"	"54.84312"	"203.0"	"100.000"	"64.6999"	"20872"	"20872"	"20851"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"272.0"	""	"292.2"	""	"296.6"	""	"321.8"	""	"369.0"	"375.4"	""	"827"	"19"	"36.000"	"29.000"	"0.509888848540154"	"14"	"0"	"0.0001101"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLFLGDYVDR"	"[R].yLFLGDYVDR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"745.39813"	"1489.78899"	"1489.78885"	"0.10"	"0.00007"	"8/78"	"8"	"78"	"3348892.16729736"	"HCD"	"MS2"	"29.35255"	"182.8"	"100.000"	"64.7265"	"20830"	"20830"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.1"	""	"255.4"	""	"266.4"	""	"270.4"	"6.3"	"322.5"	"335.8"	""	"866"	"55"	"36.000"	"29.000"	"0.000138193589125863"	"23"	"0"	"2.9E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMMDPLTGLNR"	"[R].lMMDPLTGLNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"745.40601"	"1489.80474"	"1489.80682"	"-1.40"	"-0.00104"	"10/88"	"10"	"88"	"4572226.8671875"	"HCD"	"MS2"	"29.46696"	"229.1"	"100.000"	"62.5041"	"19975"	"19975"	"19955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"329.8"	""	"282.8"	""	"320.4"	""	"299.1"	"1.4"	"465.5"	"474.8"	""	"930"	"36"	"36.000"	"29.000"	"0.0114143964579354"	"21"	"0"	"7.216E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMMDPLTGLNR"	"[R].lMMDPLTGLNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"745.40656"	"1489.80583"	"1489.80682"	"-0.66"	"-0.00049"	"9/88"	"9"	"88"	"4450467.30352783"	"HCD"	"MS2"	"33.08286"	"225.8"	"100.000"	"62.3786"	"19871"	"19871"	"19849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"326.1"	""	"297.4"	""	"310.1"	""	"302.9"	"0.7"	"442.1"	"462.5"	""	"922"	"31"	"36.000"	"29.000"	"0.0372993209521234"	"20"	"0"	"9.025E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSEIQTLK"	"[K].lVSEIqTLk.[N]"	"N-Term(TMT6plex); Q6(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q66HA4"	"Tax1-binding protein 1 homolog OS=Rattus norvegicus OX=10116 GN=Tax1bp1 PE=2 SV=1"	"Q66HA4"	"Tax1-binding protein 1 homolog OS=Rattus norvegicus OX=10116 GN=Tax1bp1 PE=2 SV=1"	"0"	"3"	"3"	"0.0833"	"0.0000"	"1"	"1"	"5"	"497.31287"	"1489.92405"	"1489.92417"	"-0.08"	"-0.00004"	"4/78"	"4"	"78"	"4183498.59936523"	"HCD"	"MS2"	"3.654899"	"136.5"	"100.000"	"58.8547"	"18433"	"18433"	"18409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"250.6"	""	"191.2"	""	"202.4"	""	"226.7"	""	"190.9"	"227.3"	""	"477"	"12"	"33.000"	"26.000"	"1.58667647754115"	"24"	"0.004819"	"0.1423"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLVEVLTK"	"[R].eTLVEVLTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63358"	"Unconventional myosin-IXb OS=Rattus norvegicus OX=10116 GN=Myo9b PE=1 SV=1"	"Q63358"	"Unconventional myosin-IXb OS=Rattus norvegicus OX=10116 GN=Myo9b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"745.47900"	"1489.95073"	"1489.92417"	"17.83"	"0.01328"	"7/78"	"7"	"78"	"2926718.59765625"	"HCD"	"MS2"	"16.90923"	"232.3"	"100.000"	"59.7656"	"18857"	"18857"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.2"	""	"357.9"	""	"357.5"	""	"333.5"	"2.8"	"399.3"	"405.2"	""	"315"	"2"	"31.000"	"24.000"	"9.49031348067114"	"13"	"0.008183"	"0.3464"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDAVKEK"	"[K].lDAVkEk.[A]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"3"	"745.48090"	"1489.95452"	"1489.95569"	"-0.79"	"-0.00059"	"12/60"	"12"	"60"	"1567949.9074707"	"HCD"	"MS2"	"0"	"150.3"	"100.000"	"34.0106"	"8366"	"8366"	"8349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.5"	""	"299.7"	""	"262.4"	""	"166.5"	"0.5"	"210.6"	"188.9"	""	"299"	"28"	"31.000"	"24.000"	"0.0259801223898031"	""	"0.0008731"	"0.008425"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LDAVKEK"	"[K].lDAVkEk.[A]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"745.48175"	"1489.95622"	"1489.95569"	"0.36"	"0.00027"	"5/60"	"5"	"60"	"1691533.78320313"	"HCD"	"MS2"	"100"	"146.5"	"100.000"	"33.9464"	"8296"	"8296"	"8283"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"281.7"	""	"269.8"	""	"259.0"	""	"161.1"	"0.4"	"208.3"	"200.7"	""	"290"	"23"	"31.000"	"24.000"	"0.0671998033617617"	"22"	"0.001879"	"0.02673"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATVGQAK"	"[K].kATVGQAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"1"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"497.32678"	"1489.96579"	"1489.96692"	"-0.76"	"-0.00038"	"11/70"	"11"	"70"	"3821859.65203857"	"HCD"	"MS2"	"18.47791"	"266.1"	"100.000"	"25.2674"	"4843"	"4843"	"4823"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.0"	""	"237.8"	""	"208.4"	""	"653.4"	""	"692.1"	"534.0"	""	"233"	"14"	"30.000"	"23.000"	"0.468086294639014"	"20"	"0.0001889"	"0.0003772"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSSVFQYLR"	"[K].dFSSVFQYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"745.89490"	"1490.78252"	"1490.78410"	"-1.06"	"-0.00079"	"6/84"	"6"	"84"	"1536048.92016602"	"HCD"	"MS2"	"29.83237"	"90.3"	"100.000"	"73.9179"	"24626"	"24626"	"24607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.2"	""	"106.3"	""	"113.3"	""	"155.0"	""	"174.5"	"202.6"	""	"883"	"35"	"36.000"	"29.000"	"0.0125582957893825"	"19"	"0"	"0.0001242"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSSVFQYLR"	"[K].dFSSVFQYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"745.89557"	"1490.78386"	"1490.78410"	"-0.16"	"-0.00012"	"6/84"	"6"	"84"	"1471266.69873047"	"HCD"	"MS2"	"23.62659"	"86.7"	"100.000"	"73.9738"	"24597"	"24597"	"24577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.9"	""	"96.7"	""	"109.4"	""	"155.1"	"0.2"	"161.4"	"194.0"	""	"894"	"34"	"36.000"	"29.000"	"0.0194673807537449"	"21"	"0"	"0.0001099"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIGPEGEPFR"	"[K].fLIGPEGEPFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"745.91284"	"1490.81841"	"1490.82048"	"-1.39"	"-0.00104"	"12/84"	"12"	"84"	"2042421.52026367"	"HCD"	"MS2"	"5.162102"	"100.7"	"100.000"	"61.3000"	"19484"	"19484"	"19459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.0"	""	"146.6"	""	"168.3"	""	"155.7"	"2.6"	"156.4"	"178.3"	""	"1036"	"34"	"37.000"	"30.000"	"0.0197847132295144"	"24"	"0.0001859"	"0.0003405"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIGPEGEPFR"	"[K].fLIGPEGEPFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"745.91382"	"1490.82036"	"1490.82048"	"-0.08"	"-0.00006"	"8/84"	"8"	"84"	"2029438.84936523"	"HCD"	"MS2"	"0"	"104.4"	"100.000"	"61.1295"	"19361"	"19361"	"19337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.7"	""	"154.4"	""	"170.8"	""	"165.9"	""	"180.4"	"174.7"	""	"1007"	"37"	"37.000"	"30.000"	"0.00957192913941381"	"25"	"0.0001308"	"0.0002153"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKVGVNGFGR"	"[M].vkVGVNGFGR.[I]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"497.64481"	"1490.91986"	"1490.92075"	"-0.60"	"-0.00030"	"13/90"	"13"	"90"	"24567299.394104"	"HCD"	"MS2"	"51.62517"	"919.2"	"70.750"	"34.4301"	"8535"	"8535"	"8508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1445.0"	""	"1412.9"	""	"1300.5"	""	"1451.0"	"7.8"	"1405.6"	"1668.8"	""	"398"	"8"	"32.000"	"25.000"	"3.4186376904436"	"13"	"0.0001889"	"0.0005108"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKVGVNGFGR"	"[M].vkVGVNGFGR.[I]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"497.64496"	"1490.92032"	"1490.92075"	"-0.29"	"-0.00014"	"13/90"	"13"	"90"	"26512773.916748"	"HCD"	"MS2"	"45.99353"	"780.1"	"56.415"	"34.3914"	"8476"	"8476"	"8451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1231.4"	""	"1207.8"	""	"1078.8"	""	"1222.2"	""	"1186.9"	"1451.2"	""	"399"	"9"	"32.000"	"26.000"	"2.48280665048391"	"13"	"0.0001889"	"0.0006337"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKQEALK"	"[RK].skQEALk.[QN]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"D3ZJP6; Q5XI32"	"Unconventional myosin-X OS=Rattus norvegicus OX=10116 GN=Myo10 PE=1 SV=1; F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"1"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"497.65448"	"1490.94889"	"1490.95094"	"-1.38"	"-0.00068"	"9/64"	"9"	"64"	"11198591.2440186"	"HCD"	"MS2"	"35.10093"	"745.7"	"100.000"	"26.7015"	"5389"	"5389"	"5369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1137.9"	""	"936.5"	""	"1018.8"	""	"1251.3"	""	"1364.8"	"1358.4"	""	"267"	"1"	"31.000"	"24.000"	"11.8982000240855"	"13"	"0.0008453"	"0.008027"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKQEALK"	"[RK].skQEALk.[QN]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"D3ZJP6; Q5XI32"	"Unconventional myosin-X OS=Rattus norvegicus OX=10116 GN=Myo10 PE=1 SV=1; F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"1"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"497.65475"	"1490.94971"	"1490.95094"	"-0.82"	"-0.00041"	"9/64"	"9"	"64"	"11931968.5653076"	"HCD"	"MS2"	"25.71812"	"781.6"	"100.000"	"26.8127"	"5471"	"5471"	"5452"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1172.9"	""	"961.5"	""	"1077.1"	""	"1267.4"	"3.4"	"1485.5"	"1438.6"	""	"245"	"0"	"30.000"	"23.000"	"10.9429921757329"	"13"	"0.001846"	"0.02668"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].SFPDFPIPGVLFR.[D]"	""	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.40216"	"1491.79704"	"1491.79946"	"-1.62"	"-0.00121"	"7/102"	"7"	"102"	"325887.209350586"	"HCD"	"MS2"	"34.63718"	"8.0"	"100.000"	"84.3084"	"28853"	"28853"	"28833"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.4"	""	"10.0"	""	"7.2"	""	"13.5"	""	"15.7"	"17.5"	"NoQuanLabels"	"1024"	"29"	"37.000"	"30.000"	"0.069385697912373"	"15"	"0.000494"	"0.002684"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIWLGLFDDR"	"[K].qIWLGLFDDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"746.41083"	"1491.81438"	"1491.81573"	"-0.91"	"-0.00068"	"5/92"	"5"	"92"	"584669.305297852"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"75.0343"	"25082"	"25082"	"25055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.2"	""	"52.1"	""	"56.1"	""	"58.1"	""	"69.5"	"77.6"	""	"1064"	"26"	"37.000"	"30.000"	"0.119374518345243"	"19"	"0.0001889"	"0.001109"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIWLGLFDDR"	"[K].qIWLGLFDDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"746.41138"	"1491.81548"	"1491.81573"	"-0.17"	"-0.00013"	"6/92"	"6"	"92"	"607504.657348633"	"HCD"	"MS2"	"19.259"	"38.3"	"100.000"	"75.0394"	"25032"	"25032"	"25009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.9"	""	"46.9"	""	"57.9"	""	"70.9"	""	"65.9"	"71.0"	""	"1053"	"47"	"37.000"	"30.000"	"0.00110763934853705"	"18"	"0.0001308"	"0.0002442"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPFHIIFDR"	"[K].aFPFHIIFDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"497.94690"	"1491.82614"	"1491.83099"	"-3.25"	"-0.00161"	"6/72"	"6"	"72"	"7091314.79730225"	"HCD"	"MS2"	"29.76342"	"120.3"	"100.000"	"64.0608"	"20558"	"20558"	"20537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.6"	""	"179.5"	""	"174.4"	""	"183.8"	""	"197.8"	"206.6"	""	"1077"	"28"	"37.000"	"30.000"	"0.0877375913576491"	"21"	"0.0001859"	"0.0003544"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPFHIIFDR"	"[K].aFPFHIIFDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"497.94821"	"1491.83008"	"1491.83099"	"-0.61"	"-0.00030"	"6/72"	"6"	"72"	"7968842.80560303"	"HCD"	"MS2"	"40.21291"	"126.9"	"100.000"	"64.0867"	"20622"	"20622"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.5"	""	"181.8"	""	"185.4"	""	"203.3"	""	"214.2"	"219.7"	""	"1088"	"26"	"37.000"	"30.000"	"0.138547565740626"	"21"	"0.0001859"	"0.0003374"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAELQSPNK"	"[K].fAELQSPNk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"746.43134"	"1491.85539"	"1491.85715"	"-1.18"	"-0.00088"	"8/78"	"8"	"78"	"1802094.1887207"	"HCD"	"MS2"	"0"	"154.4"	"100.000"	"39.6291"	"10669"	"10669"	"10638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.5"	""	"213.2"	""	"193.7"	""	"256.7"	"0.4"	"287.5"	"282.1"	""	"1022"	"40"	"37.000"	"30.000"	"0.00506315123840204"	"25"	"0.0001859"	"0.0003155"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAELQSPNK"	"[K].fAELQSPNk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"746.43195"	"1491.85661"	"1491.85715"	"-0.36"	"-0.00027"	"8/78"	"8"	"78"	"1044961.49804688"	"HCD"	"MS2"	"0"	"103.7"	"100.000"	"39.5564"	"10596"	"10596"	"10566"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.8"	""	"142.4"	""	"134.4"	""	"166.5"	""	"191.5"	"194.0"	""	"1002"	"58"	"36.000"	"30.000"	"7.77745891988999E-05"	"24"	"0"	"0.0001067"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDFLQLFAPR"	"[R].rDFLQLFAPR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PD6"	"Transforming growth factor beta-1-induced transcript 1 protein OS=Rattus norvegicus OX=10116 GN=Tgfb1i1 PE=1 SV=2"	"Q99PD6"	"Transforming growth factor beta-1-induced transcript 1 protein OS=Rattus norvegicus OX=10116 GN=Tgfb1i1 PE=1 SV=2"	"1"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"497.95886"	"1491.86203"	"1491.86335"	"-0.88"	"-0.00044"	"9/90"	"9"	"90"	"3454747.06762695"	"HCD"	"MS2"	"9.735951"	"59.3"	"100.000"	"58.3876"	"18246"	"18246"	"18218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.7"	""	"75.9"	""	"102.5"	""	"91.2"	"1.2"	"112.3"	"105.9"	""	"957"	"57"	"36.000"	"29.000"	"8.88959431761378E-05"	""	"0"	"1.292E-05"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDFLQLFAPR"	"[R].rDFLQLFAPR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PD6"	"Transforming growth factor beta-1-induced transcript 1 protein OS=Rattus norvegicus OX=10116 GN=Tgfb1i1 PE=1 SV=2"	"Q99PD6"	"Transforming growth factor beta-1-induced transcript 1 protein OS=Rattus norvegicus OX=10116 GN=Tgfb1i1 PE=1 SV=2"	"1"	"3"	"3"	"0.8070"	"0.0000"	"1"	"1"	"1"	"497.95935"	"1491.86350"	"1491.86335"	"0.10"	"0.00005"	"9/90"	"9"	"90"	"3511567.56317139"	"HCD"	"MS2"	"50.53064"	"61.4"	"100.000"	"58.5566"	"18369"	"18369"	"18341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.0"	""	"82.1"	""	"101.8"	""	"88.8"	"3.2"	"107.7"	"109.5"	""	"950"	"57"	"36.000"	"29.000"	"9.07180297818963E-05"	"27"	"0"	"7.87E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEGVLDFK"	"[K].lIEGVLDFk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q704S8"	"Carnitine O-acetyltransferase OS=Rattus norvegicus OX=10116 GN=Crat PE=1 SV=1"	"Q704S8"	"Carnitine O-acetyltransferase OS=Rattus norvegicus OX=10116 GN=Crat PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.46204"	"1491.91680"	"1491.91869"	"-1.27"	"-0.00095"	"4/72"	"4"	"72"	"501678.359130859"	"HCD"	"MS2"	"100"	"51.9"	"100.000"	"71.9770"	"23834"	"23834"	"23807"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.5"	""	"69.6"	""	"84.6"	""	"72.4"	""	"92.9"	"96.5"	""	"493"	"3"	"33.000"	"26.000"	"11.8254295088944"	"13"	"0.005762"	"0.1868"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFSNVNLK"	"[K].lVFSNVNLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"746.46710"	"1491.92693"	"1491.92992"	"-2.01"	"-0.00150"	"8/72"	"8"	"72"	"2241326.48754883"	"HCD"	"MS2"	"16.68455"	"169.8"	"100.000"	"56.5970"	"17568"	"17568"	"17541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.3"	""	"257.3"	""	"244.7"	""	"255.2"	""	"295.4"	"306.8"	""	"404"	"52"	"33.000"	"26.000"	"0.000133460076497535"	"24"	"0"	"0.0001044"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFSNVNLK"	"[K].lVFSNVNLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"497.98102"	"1491.92850"	"1491.92992"	"-0.95"	"-0.00047"	"7/72"	"7"	"72"	"2396661.60528564"	"HCD"	"MS2"	"4.40236"	"92.9"	"100.000"	"56.6846"	"17604"	"17604"	"17573"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.3"	""	"131.1"	""	"145.0"	""	"150.0"	"1.6"	"164.8"	"173.2"	""	"371"	"47"	"32.000"	"25.000"	"0.000377002225528669"	"23"	"0.0003839"	"0.00189"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFSNVNLK"	"[K].lVFSNVNLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"746.46820"	"1491.92912"	"1491.92992"	"-0.53"	"-0.00040"	"8/72"	"8"	"72"	"2105722.05267334"	"HCD"	"MS2"	"11.6855"	"161.1"	"100.000"	"56.3963"	"17432"	"17432"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.7"	""	"227.1"	""	"235.5"	""	"241.1"	"0.2"	"296.9"	"294.5"	""	"371"	"54"	"32.000"	"25.000"	"7.52218333256752E-05"	"24"	"0"	"7.921E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFVSLAELQ"	"[R].kFVSLAELQ.[-]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"1"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"746.96075"	"1492.91423"	"1492.91394"	"0.20"	"0.00015"	"5/86"	"5"	"86"	"3123677.85565186"	"HCD"	"MS2"	"0"	"106.2"	"100.000"	"54.9017"	"16874"	"16874"	"16853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.4"	""	"151.3"	""	"139.7"	""	"165.0"	"1.5"	"203.9"	"167.3"	""	"484"	"34"	"33.000"	"26.000"	"0.00992693929227589"	"21"	"0.004346"	"0.1178"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFVSLAELQ"	"[R].kFVSLAELQ.[-]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"1"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"746.96112"	"1492.91496"	"1492.91394"	"0.69"	"0.00051"	"8/86"	"8"	"86"	"3573320.01489258"	"HCD"	"MS2"	"9.066283"	"128.0"	"100.000"	"54.7071"	"16741"	"16741"	"16720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.1"	""	"193.9"	""	"179.8"	""	"188.7"	"0.2"	"239.2"	"199.2"	""	"471"	"42"	"33.000"	"26.000"	"0.00157394992587409"	"21"	"0.007192"	"0.2639"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVTAAMGK"	"[R].kVTAAMGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.32031"	"1492.94638"	"1492.94883"	"-1.64"	"-0.00082"	"7/70"	"7"	"70"	"18006272.4716797"	"HCD"	"MS2"	"9.743972"	"338.3"	"26.674"	"30.2960"	"6812"	"6812"	"6794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"507.2"	""	"469.8"	""	"494.6"	""	"383.8"	"3.0"	"660.7"	"688.4"	""	"235"	"17"	"30.000"	"23.000"	"0.235525463215406"	"14"	"0.0003839"	"0.001604"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVTAAMGK"	"[R].kVTAAMGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.32040"	"1492.94666"	"1492.94883"	"-1.46"	"-0.00072"	"10/70"	"10"	"70"	"14718414.373291"	"HCD"	"MS2"	"9.989768"	"304.8"	"30.533"	"30.3836"	"6889"	"6889"	"6869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"467.7"	""	"425.1"	""	"455.1"	""	"342.0"	""	"570.3"	"632.6"	""	"235"	"19"	"30.000"	"23.000"	"0.16107860752437"	"14"	"0.0003146"	"0.001434"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVTAAMGK"	"[R].kVTAAMGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"1"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"746.97803"	"1492.94878"	"1492.94883"	"-0.04"	"-0.00003"	"14/70"	"14"	"70"	"1253013.59545898"	"HCD"	"MS2"	"0"	"104.8"	"100.000"	"30.2479"	"6793"	"6793"	"6762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.3"	""	"157.4"	""	"150.7"	""	"99.9"	""	"206.6"	"207.3"	""	"226"	"27"	"30.000"	"23.000"	"0.0215317061129847"	"19"	"0.0001889"	"0.000914"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVTAAMGK"	"[R].kVTAAMGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"1"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"746.97809"	"1492.94890"	"1492.94883"	"0.05"	"0.00003"	"7/70"	"7"	"70"	"1083999.11401367"	"HCD"	"MS2"	"0"	"91.1"	"100.000"	"30.3237"	"6865"	"6865"	"6838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.6"	""	"135.3"	""	"125.0"	""	"89.5"	""	"172.0"	"182.4"	""	"226"	"42"	"30.000"	"23.000"	"0.000755228626852535"	"20"	"0.0001889"	"0.0008813"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPFDLFENR"	"[R].rAPFDLFENR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"1"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"498.60544"	"1493.80176"	"1493.80623"	"-2.99"	"-0.00149"	"9/96"	"9"	"96"	"7749846.39880371"	"HCD"	"MS2"	"43.17799"	"223.1"	"100.000"	"43.2116"	"12130"	"12130"	"12116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"302.8"	""	"291.6"	""	"308.5"	""	"384.5"	""	"414.8"	"416.4"	""	"959"	"37"	"36.000"	"29.000"	"0.00903209738410359"	"25"	"0"	"0.0001602"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPFDLFENR"	"[R].rAPFDLFENR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"1"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"498.60577"	"1493.80277"	"1493.80623"	"-2.32"	"-0.00115"	"9/96"	"9"	"96"	"9944455.20245361"	"HCD"	"MS2"	"15.77361"	"210.5"	"100.000"	"42.8408"	"11935"	"11935"	"11915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"288.3"	""	"281.6"	""	"286.9"	""	"341.0"	""	"386.6"	"411.5"	""	"974"	"48"	"36.000"	"29.000"	"0.000740506646979726"	""	"0"	"2.282E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWDLTTGTTTR"	"[R].lWDLTTGTTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"747.41077"	"1493.81426"	"1493.81612"	"-1.25"	"-0.00093"	"8/94"	"8"	"94"	"2594082.16662598"	"HCD"	"MS2"	"22.04591"	"160.9"	"100.000"	"51.5325"	"15464"	"15464"	"15442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.6"	""	"209.8"	""	"208.0"	""	"275.2"	""	"311.7"	"325.9"	""	"985"	"39"	"36.000"	"29.000"	"0.005706978479064"	"18"	"0"	"8.673E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWDLTTGTTTR"	"[R].lWDLTTGTTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"747.41125"	"1493.81523"	"1493.81612"	"-0.60"	"-0.00045"	"10/94"	"10"	"94"	"9005543.47796631"	"HCD"	"MS2"	"0"	"275.4"	"65.975"	"51.8313"	"15587"	"15587"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"355.2"	""	"379.3"	""	"397.0"	""	"447.6"	""	"482.2"	"549.7"	""	"966"	"45"	"36.000"	"29.000"	"0.00167473898768573"	"18"	"0"	"3.887E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWDLTTGTTTR"	"[R].lWDLTTGTTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"747.41132"	"1493.81536"	"1493.81612"	"-0.51"	"-0.00038"	"10/94"	"10"	"94"	"7899848.67059326"	"HCD"	"MS2"	"0"	"353.2"	"100.000"	"52.0316"	"15719"	"15719"	"15702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"454.9"	""	"476.4"	""	"517.2"	""	"569.4"	"4.4"	"653.7"	"671.6"	""	"963"	"43"	"36.000"	"29.000"	"0.00269523285119895"	"18"	"0"	"3.325E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWDLTTGTTTR"	"[R].lWDLTTGTTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"747.41138"	"1493.81548"	"1493.81612"	"-0.43"	"-0.00032"	"8/94"	"8"	"94"	"3007000.62402344"	"HCD"	"MS2"	"17.13968"	"177.9"	"100.000"	"51.7299"	"15595"	"15595"	"15574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.2"	""	"243.9"	""	"245.7"	""	"295.6"	"2.4"	"326.4"	"334.6"	""	"962"	"41"	"36.000"	"29.000"	"0.00401000649802044"	"16"	"0"	"9.737E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLLQQTMLR"	"[K].dFLLQQTMLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"3"	"747.41949"	"1493.83171"	"1493.83475"	"-2.03"	"-0.00152"	"7/94"	"7"	"94"	"1218997.67095947"	"HCD"	"MS2"	"37.19939"	"96.0"	"100.000"	"59.8113"	"18876"	"18876"	"18853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.1"	""	"133.6"	""	"137.9"	""	"149.2"	"5.2"	"177.6"	"178.0"	""	"951"	"11"	"36.000"	"29.000"	"3.63203915091192"	"21"	"0.000523"	"0.003036"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLLQQTMLR"	"[K].dFLLQQTMLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"747.42090"	"1493.83452"	"1493.83475"	"-0.15"	"-0.00012"	"8/94"	"8"	"94"	"3204543.3024292"	"HCD"	"MS2"	"26.24046"	"182.1"	"100.000"	"59.4754"	"18739"	"18739"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.2"	""	"251.2"	""	"245.1"	""	"268.2"	""	"341.5"	"354.4"	""	"973"	"40"	"36.000"	"29.000"	"0.00516514888577179"	"21"	"0"	"8.779E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLLQQTMLR"	"[K].dFLLQQTMLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"747.42120"	"1493.83513"	"1493.83475"	"0.25"	"0.00019"	"6/94"	"6"	"94"	"1455035.37994385"	"HCD"	"MS2"	"47.43066"	"116.5"	"100.000"	"59.6413"	"18753"	"18753"	"18729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.4"	""	"154.1"	""	"165.2"	""	"185.5"	"5.9"	"205.7"	"210.5"	""	"961"	"30"	"36.000"	"29.000"	"0.0466330039261458"	"18"	"0"	"4.322E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLLQQTMLR"	"[K].dFLLQQTMLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"747.42145"	"1493.83562"	"1493.83475"	"0.58"	"0.00043"	"8/94"	"8"	"94"	"3257728.62023926"	"HCD"	"MS2"	"28.17695"	"190.7"	"100.000"	"59.3306"	"18626"	"18626"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"258.6"	""	"280.9"	""	"287.0"	""	"257.1"	"1.2"	"350.3"	"372.1"	""	"957"	"37"	"36.000"	"29.000"	"0.00888959431761378"	"20"	"0"	"7.976E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"MMTGAGNILK"	"[].mMTGAGNILk.[]"	"N-Term(TMT6plex); K10(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"4"	"4"	"6"	"747.43286"	"1493.85845"	"1493.85841"	"0.02"	"0.00002"	"6/78"	"6"	"78"	"865727.683898926"	"HCD"	"MS2"	"0"	"89.1"	"100.000"	"41.5151"	"11395"	"11395"	"11371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.2"	""	"131.8"	""	"140.0"	""	"94.1"	"1.3"	"142.5"	"170.9"	""	"872"	"9"	"36.000"	"29.000"	"5.51425047497422"	"21"	"0.009767"	"0.4415"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVQSVAPFLR"	"[K].tFVQSVAPFLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"747.43695"	"1493.86662"	"1493.86777"	"-0.76"	"-0.00057"	"7/102"	"7"	"102"	"1125489.18078613"	"HCD"	"MS2"	"32.81014"	"80.8"	"100.000"	"65.0998"	"20983"	"20983"	"20953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.9"	""	"104.5"	""	"104.8"	""	"145.1"	"3.7"	"158.7"	"145.4"	""	"842"	"20"	"36.000"	"29.000"	"0.391094848834353"	"18"	"0.0003839"	"0.001573"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVQAVTGWK"	"[R].fVQAVTGWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"747.44696"	"1493.88664"	"1493.88806"	"-0.95"	"-0.00071"	"8/76"	"8"	"76"	"3091886.99145508"	"HCD"	"MS2"	"22.35355"	"239.8"	"100.000"	"56.8181"	"17604"	"17604"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.9"	""	"441.9"	""	"351.3"	""	"343.1"	""	"388.6"	"354.5"	""	"713"	"52"	"35.000"	"28.000"	"0.000213333733639004"	"21"	"0"	"0.0001599"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVQAVTGWK"	"[R].fVQAVTGWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"747.44757"	"1493.88786"	"1493.88806"	"-0.13"	"-0.00010"	"8/76"	"8"	"76"	"3246434.33239746"	"HCD"	"MS2"	"26.7612"	"260.7"	"100.000"	"57.0302"	"17745"	"17745"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"412.3"	""	"483.0"	""	"400.2"	""	"373.4"	"2.5"	"412.8"	"378.0"	""	"688"	"52"	"35.000"	"28.000"	"0.000201167788945701"	"25"	"0"	"0.0001022"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISELDAFLK"	"[K].iSELDAFLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"747.45142"	"1493.89556"	"1493.89795"	"-1.60"	"-0.00120"	"9/70"	"9"	"70"	"560501.204162598"	"HCD"	"MS2"	"21.48263"	"45.6"	"100.000"	"70.7009"	"23261"	"23261"	"23235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.0"	""	"40.6"	""	"64.4"	""	"78.3"	"1.6"	"101.0"	"107.2"	""	"616"	"36"	"34.000"	"27.000"	"0.00694305677342948"	""	"0"	"4.458E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISELDAFLK"	"[K].iSELDAFLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.5517"	"0.0000"	"1"	"1"	"1"	"498.63702"	"1493.89652"	"1493.89795"	"-0.96"	"-0.00048"	"7/70"	"7"	"70"	"3265678.80267334"	"HCD"	"MS2"	"47.03089"	"101.4"	"100.000"	"70.2887"	"23145"	"23145"	"23114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.0"	""	"94.6"	""	"101.7"	""	"221.0"	"3.6"	"241.8"	"228.1"	""	"612"	"29"	"34.000"	"27.000"	"0.0373870696010451"	"27"	"0.0001859"	"0.0003573"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISELDAFLK"	"[K].iSELDAFLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.4737"	"0.0000"	"1"	"1"	"1"	"498.63730"	"1493.89734"	"1493.89795"	"-0.41"	"-0.00020"	"7/70"	"7"	"70"	"2869641.63165283"	"HCD"	"MS2"	"50.18676"	"93.9"	"100.000"	"70.3434"	"23115"	"23115"	"23091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.1"	""	"93.6"	""	"98.8"	""	"196.3"	""	"227.2"	"216.3"	""	"612"	"19"	"34.000"	"27.000"	"0.389691942791099"	"23"	"0.0001889"	"0.0003914"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISELDAFLK"	"[K].iSELDAFLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.6122"	"0.0000"	"1"	"1"	"1"	"747.45239"	"1493.89751"	"1493.89795"	"-0.30"	"-0.00022"	"8/70"	"8"	"70"	"5305180.12371826"	"HCD"	"MS2"	"19.22408"	"413.9"	"100.000"	"70.3709"	"23126"	"23126"	"23107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.4"	""	"361.7"	""	"424.0"	""	"858.4"	"3.1"	"977.6"	"970.3"	""	"612"	"49"	"34.000"	"27.000"	"0.000379945606123278"	""	"7.476E-05"	"0.0001881"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISELDAFLK"	"[K].iSELDAFLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"747.45239"	"1493.89751"	"1493.89795"	"-0.30"	"-0.00022"	"13/70"	"13"	"70"	"5176658.0524292"	"HCD"	"MS2"	"18.49453"	"378.5"	"100.000"	"70.2980"	"23148"	"23148"	"23130"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"297.9"	""	"346.7"	""	"398.6"	""	"764.3"	"5.2"	"906.9"	"887.3"	""	"612"	"39"	"34.000"	"27.000"	"0.00383461199532073"	""	"0.0001308"	"0.0002982"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFITQQGIK"	"[K].tFITQQGIk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"498.64099"	"1493.90842"	"1493.90919"	"-0.51"	"-0.00025"	"7/78"	"7"	"78"	"10981345.8392944"	"HCD"	"MS2"	"67.84328"	"363.8"	"100.000"	"41.0728"	"11258"	"11258"	"11229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"549.6"	""	"484.7"	""	"494.1"	""	"592.1"	""	"655.6"	"669.9"	""	"446"	"43"	"33.000"	"26.000"	"0.00115692408681158"	"23"	"0.0001889"	"0.0008278"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVFQTVNK"	"[K].lSVFQTVNk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"747.45813"	"1493.90898"	"1493.90919"	"-0.14"	"-0.00010"	"8/80"	"8"	"80"	"3345095.04614258"	"HCD"	"MS2"	"37.3618"	"264.6"	"100.000"	"49.3949"	"14600"	"14600"	"14575"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.7"	""	"324.3"	""	"336.2"	""	"467.0"	""	"518.5"	"511.2"	""	"435"	"53"	"33.000"	"26.000"	"0.000102437568491337"	""	"0.0001308"	"0.0002293"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFITQQGIK"	"[K].tFITQQGIk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"747.45825"	"1493.90923"	"1493.90919"	"0.03"	"0.00002"	"8/78"	"8"	"78"	"6572154.40777588"	"HCD"	"MS2"	"19.12942"	"503.0"	"100.000"	"40.8780"	"11134"	"11134"	"11109"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"717.4"	""	"651.6"	""	"659.5"	""	"848.3"	""	"926.0"	"964.5"	""	"435"	"54"	"33.000"	"26.000"	"8.50078948348475E-05"	"24"	"7.476E-05"	"0.0001924"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFITQQGIK"	"[K].tFITQQGIk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"747.45874"	"1493.91020"	"1493.90919"	"0.68"	"0.00051"	"8/78"	"8"	"78"	"6773158.02203369"	"HCD"	"MS2"	"15.62329"	"491.4"	"100.000"	"41.0613"	"11253"	"11253"	"11229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"729.2"	""	"669.8"	""	"635.2"	""	"795.1"	"0.2"	"899.2"	"927.3"	""	"426"	"54"	"33.000"	"26.000"	"8.09803414162795E-05"	"24"	"0.0001308"	"0.0002073"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFITQQGIK"	"[K].tFITQQGIk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"498.64169"	"1493.91053"	"1493.90919"	"0.90"	"0.00045"	"7/78"	"7"	"78"	"10999878.0084839"	"HCD"	"MS2"	"66.11791"	"400.7"	"100.000"	"40.9238"	"11153"	"11153"	"11125"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"602.3"	""	"550.7"	""	"556.2"	""	"599.5"	""	"716.7"	"770.0"	""	"426"	"32"	"33.000"	"26.000"	"0.014268542180572"	"18"	"0.0001889"	"0.0009448"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFLPLFDR"	"[R].kFLPLFDR.[V]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.64584"	"1493.92298"	"1493.92444"	"-0.98"	"-0.00049"	"7/70"	"7"	"70"	"7425565.53076172"	"HCD"	"MS2"	"25.00117"	"302.5"	"100.000"	"51.7346"	"15547"	"15547"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"455.7"	""	"369.0"	""	"448.7"	""	"547.1"	""	"478.4"	"564.8"	""	"358"	"10"	"32.000"	"25.000"	"1.62499874901895"	"13"	"0.0003146"	"0.001401"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFLPLFDR"	"[R].kFLPLFDR.[V]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.64597"	"1493.92334"	"1493.92444"	"-0.74"	"-0.00037"	"8/70"	"8"	"70"	"7381399.03894043"	"HCD"	"MS2"	"18.91696"	"283.7"	"100.000"	"51.8520"	"15645"	"15645"	"15622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"398.9"	""	"361.6"	""	"431.5"	""	"515.9"	""	"457.7"	"523.4"	""	"358"	"13"	"32.000"	"25.000"	"0.990496695496169"	"13"	"0.000523"	"0.002867"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFYEVFK"	"[K].fGFYEVFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"498.95105"	"1494.83860"	"1494.83971"	"-0.74"	"-0.00037"	"5/56"	"5"	"56"	"2067701.17578125"	"HCD"	"MS2"	"58.95996"	"73.9"	"100.000"	"70.2056"	"23111"	"23111"	"23082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.5"	""	"82.3"	""	"89.3"	""	"155.4"	""	"155.0"	"164.7"	""	"979"	"9"	"36.000"	"29.000"	"5.95323047316397"	"17"	"0.003788"	"0.09044"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFYEVFK"	"[K].fGFYEVFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"747.92303"	"1494.83879"	"1494.83971"	"-0.61"	"-0.00046"	"7/56"	"7"	"56"	"5957985.70623779"	"HCD"	"MS2"	"36.49913"	"496.1"	"100.000"	"70.2150"	"23115"	"23115"	"23098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"431.3"	""	"575.7"	""	"633.4"	""	"939.8"	""	"1075.2"	"1067.3"	""	"980"	"15"	"36.000"	"29.000"	"1.41643314235908"	"23"	"0.0003839"	"0.001685"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFYEVFK"	"[K].fGFYEVFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"747.92352"	"1494.83977"	"1494.83971"	"0.04"	"0.00003"	"7/56"	"7"	"56"	"6124155.34735107"	"HCD"	"MS2"	"38.75868"	"485.5"	"100.000"	"70.3250"	"23108"	"23108"	"23091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.5"	""	"550.6"	""	"617.5"	""	"893.8"	""	"1043.1"	"1083.3"	""	"969"	"15"	"36.000"	"29.000"	"1.52859974002501"	"21"	"0.0003146"	"0.001475"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIGADFLTK"	"[K].aTIGADFLTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"498.96863"	"1494.89133"	"1494.89320"	"-1.25"	"-0.00062"	"8/86"	"8"	"86"	"13477525.105896"	"HCD"	"MS2"	"9.447762"	"392.5"	"100.000"	"52.7077"	"15945"	"15945"	"15922"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"490.9"	""	"548.5"	""	"561.3"	""	"642.4"	""	"734.1"	"746.8"	""	"606"	"43"	"34.000"	"27.000"	"0.00152912373161749"	"23"	"0"	"0.0001162"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIGADFLTK"	"[K].aTIGADFLTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"498.96899"	"1494.89243"	"1494.89320"	"-0.52"	"-0.00026"	"9/86"	"9"	"86"	"10033150.5946045"	"HCD"	"MS2"	"66.12078"	"307.4"	"100.000"	"52.8717"	"16062"	"16062"	"16038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"377.6"	""	"438.0"	""	"443.6"	""	"503.5"	""	"578.3"	"580.6"	""	"601"	"33"	"34.000"	"27.000"	"0.0136095722761038"	"26"	"0.0001889"	"0.0003768"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIGADFLTK"	"[K].aTIGADFLTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.9028"	"0.0000"	"1"	"1"	"1"	"747.95020"	"1494.89311"	"1494.89320"	"-0.06"	"-0.00004"	"9/86"	"9"	"86"	"9965241.8928833"	"HCD"	"MS2"	"0"	"694.9"	"100.000"	"52.8303"	"16045"	"16045"	"16022"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"942.5"	""	"1002.7"	""	"982.8"	""	"1139.6"	"3.6"	"1228.5"	"1282.6"	""	"588"	"72"	"34.000"	"27.000"	"2.00607576077651E-06"	"24"	"0"	"5.505E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIGADFLTK"	"[K].aTIGADFLTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.8904"	"0.0000"	"1"	"1"	"1"	"747.95062"	"1494.89397"	"1494.89320"	"0.51"	"0.00038"	"18/86"	"18"	"86"	"13262811.4362793"	"HCD"	"MS2"	"0"	"940.3"	"100.000"	"52.6665"	"15928"	"15928"	"15906"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1302.4"	""	"1334.7"	""	"1304.0"	""	"1543.2"	"6.8"	"1661.9"	"1753.7"	""	"584"	"73"	"34.000"	"27.000"	"1.54661725616364E-06"	"25"	"0"	"5.312E-05"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTFITSVIK"	"[R].qTFITSVIk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"747.96771"	"1494.92815"	"1494.92959"	"-0.96"	"-0.00072"	"7/88"	"7"	"88"	"2178645.19335938"	"HCD"	"MS2"	"43.05246"	"165.7"	"100.000"	"52.3309"	"15841"	"15841"	"15814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.0"	""	"242.1"	""	"199.6"	""	"270.1"	"7.5"	"310.5"	"335.5"	""	"327"	"36"	"32.000"	"25.000"	"0.0036772042805415"	"19"	"0.0001859"	"0.0003682"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTFITSVIK"	"[R].qTFITSVIk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"747.96783"	"1494.92839"	"1494.92959"	"-0.80"	"-0.00060"	"13/88"	"13"	"88"	"2150430.37255859"	"HCD"	"MS2"	"43.22866"	"168.4"	"100.000"	"52.0961"	"15695"	"15695"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.5"	""	"240.3"	""	"216.4"	""	"249.4"	"6.1"	"318.8"	"349.4"	""	"328"	"41"	"32.000"	"25.000"	"0.00125557843533446"	"20"	"0.0001308"	"0.0002836"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINTLFK"	"[K].sTLINTLFk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"747.96796"	"1494.92864"	"1494.92959"	"-0.64"	"-0.00048"	"16/82"	"16"	"82"	"5088475.73242188"	"HCD"	"MS2"	"13.19745"	"340.3"	"100.000"	"63.9899"	"20582"	"20582"	"20563"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"467.0"	""	"441.5"	""	"542.6"	""	"554.9"	""	"609.0"	"607.5"	""	"328"	"55"	"32.000"	"25.000"	"5.46819316931706E-05"	"16"	"0.0001308"	"0.0002215"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINTLFK"	"[K].sTLINTLFk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"747.96832"	"1494.92937"	"1494.92959"	"-0.15"	"-0.00011"	"8/82"	"8"	"82"	"4970383.83538818"	"HCD"	"MS2"	"19.65027"	"347.5"	"100.000"	"63.9754"	"20523"	"20523"	"20505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"477.8"	""	"475.0"	""	"528.8"	""	"577.1"	""	"604.1"	"630.8"	""	"323"	"49"	"32.000"	"25.000"	"0.000208052302598441"	"16"	"0.0001859"	"0.0003144"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYNVGVK"	"[K].kYNVGVk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.99185"	"1494.96100"	"1494.96111"	"-0.07"	"-0.00004"	"4/62"	"4"	"62"	"20816290.8376465"	"HCD"	"MS2"	"23.16668"	"637.0"	"48.892"	"31.0002"	"7140"	"7140"	"7120"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"960.4"	""	"930.4"	""	"919.9"	""	"967.1"	""	"1129.6"	"1125.7"	""	"154"	"12"	"28.000"	"21.000"	"0.492595823321639"	"13"	"0.00252"	"0.0381"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYNVGVK"	"[K].kYNVGVk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.99188"	"1494.96109"	"1494.96111"	"-0.01"	"-0.00001"	"4/62"	"4"	"62"	"23730200.0153809"	"HCD"	"MS2"	"26.32813"	"738.6"	"53.997"	"30.8810"	"7052"	"7052"	"7032"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1162.1"	""	"1082.0"	""	"1075.2"	""	"1102.7"	""	"1264.2"	"1311.9"	""	"154"	"12"	"28.000"	"21.000"	"0.468263950984613"	"13"	"0.001966"	"0.0278"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAEPVPGIK"	"[R].lLAEPVPGIk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.99307"	"1494.96466"	"1494.96597"	"-0.87"	"-0.00044"	"9/72"	"9"	"72"	"7787659.99206543"	"HCD"	"MS2"	"30.65837"	"261.5"	"100.000"	"55.2737"	"17027"	"17027"	"16997"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.5"	""	"308.5"	""	"340.0"	""	"483.1"	""	"534.9"	"543.3"	""	"144"	"30"	"28.000"	"21.000"	"0.00738469386901014"	"14"	"0.0003839"	"0.001603"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAEPVPGIK"	"[R].lLAEPVPGIk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"2"	"2"	"0.9306"	"0.0000"	"1"	"1"	"1"	"747.98615"	"1494.96501"	"1494.96597"	"-0.64"	"-0.00048"	"9/72"	"9"	"72"	"6492272.03063965"	"HCD"	"MS2"	"34.80246"	"379.6"	"100.000"	"55.2531"	"17018"	"17018"	"16997"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"484.7"	""	"430.1"	""	"513.9"	""	"665.7"	"2.7"	"720.5"	"783.6"	""	"144"	"72"	"28.000"	"21.000"	"4.48056205321795E-07"	""	"0.0001308"	"0.0002303"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAEPVPGIK"	"[R].lLAEPVPGIk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.99329"	"1494.96531"	"1494.96597"	"-0.45"	"-0.00022"	"10/72"	"10"	"72"	"7803129.90216064"	"HCD"	"MS2"	"55.67603"	"272.0"	"100.000"	"55.0588"	"16885"	"16885"	"16859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.1"	""	"305.9"	""	"334.5"	""	"515.8"	""	"544.0"	"563.1"	""	"144"	"31"	"28.000"	"21.000"	"0.00605804501984541"	"14"	"0.000523"	"0.002856"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAEPVPGIK"	"[R].lLAEPVPGIk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"747.98633"	"1494.96538"	"1494.96597"	"-0.40"	"-0.00030"	"9/72"	"9"	"72"	"5994286.62207031"	"HCD"	"MS2"	"53.52361"	"374.0"	"100.000"	"55.0497"	"16881"	"16881"	"16859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"499.4"	""	"435.7"	""	"486.3"	""	"639.2"	"2.3"	"737.5"	"747.8"	""	"144"	"55"	"28.000"	"21.000"	"2.32987432989333E-05"	""	"0.0001859"	"0.0003251"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSMIDEAK"	"[K].iMSMIDEAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"748.41620"	"1495.82512"	"1495.82644"	"-0.88"	"-0.00066"	"8/72"	"8"	"72"	"3066799.92382813"	"HCD"	"MS2"	"20.38314"	"247.6"	"100.000"	"57.7079"	"18022"	"18022"	"18005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"365.1"	""	"408.9"	""	"310.4"	""	"271.8"	"0.8"	"458.5"	"532.5"	""	"918"	"49"	"36.000"	"29.000"	"0.000545522522393591"	"24"	"0"	"0.0001787"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSMIDEAK"	"[K].iMSMIDEAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"499.27997"	"1495.82535"	"1495.82644"	"-0.73"	"-0.00036"	"7/72"	"7"	"72"	"4697152.09820557"	"HCD"	"MS2"	"19.38972"	"160.6"	"100.000"	"57.5305"	"17949"	"17949"	"17925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.3"	""	"246.9"	""	"212.4"	""	"189.1"	""	"319.5"	"351.9"	""	"868"	"40"	"36.000"	"29.000"	"0.00467185902715349"	"24"	"0.0001889"	"0.001021"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSMIDEAK"	"[K].iMSMIDEAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"748.41650"	"1495.82573"	"1495.82644"	"-0.48"	"-0.00036"	"16/72"	"16"	"72"	"3349925.58618164"	"HCD"	"MS2"	"24.92911"	"267.3"	"100.000"	"57.5020"	"17884"	"17884"	"17867"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"390.9"	""	"417.6"	""	"318.5"	""	"281.6"	""	"534.9"	"600.0"	""	"873"	"54"	"36.000"	"29.000"	"0.000164431208256476"	"25"	"0"	"0.0001183"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSMIDEAK"	"[K].iMSMIDEAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"748.41675"	"1495.82622"	"1495.82644"	"-0.15"	"-0.00011"	"8/72"	"8"	"72"	"5219129.44940186"	"HCD"	"MS2"	"11.75451"	"417.2"	"100.000"	"57.1929"	"17757"	"17757"	"17739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"582.7"	""	"615.3"	""	"552.3"	""	"403.0"	""	"868.8"	"941.6"	""	"878"	"50"	"36.000"	"29.000"	"0.000440011999516197"	"29"	"0"	"0.0001543"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSMIDEAK"	"[K].iMSMIDEAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"499.28033"	"1495.82645"	"1495.82644"	"0.00"	"0.00000"	"7/72"	"7"	"72"	"4468022.83880615"	"HCD"	"MS2"	"25.15036"	"165.1"	"100.000"	"57.3128"	"17806"	"17806"	"17787"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.6"	""	"242.0"	""	"225.0"	""	"172.0"	""	"344.8"	"368.4"	""	"881"	"42"	"36.000"	"29.000"	"0.00260582899854296"	"23"	"0.0001889"	"0.0008507"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSMIDEAK"	"[K].iMSMIDEAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"748.41687"	"1495.82646"	"1495.82644"	"0.01"	"0.00001"	"8/72"	"8"	"72"	"6888268.93865967"	"HCD"	"MS2"	"13.75407"	"526.4"	"100.000"	"57.4060"	"17898"	"17898"	"17877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"729.8"	""	"835.6"	""	"697.9"	""	"475.0"	""	"1119.7"	"1143.4"	""	"881"	"50"	"36.000"	"29.000"	"0.00042652639568308"	"29"	"0"	"0.0001544"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWSEELFK"	"[K].vWSEELFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"748.43127"	"1495.85527"	"1495.85609"	"-0.54"	"-0.00041"	"7/60"	"7"	"60"	"1685658.4644165"	"HCD"	"MS2"	"0"	"142.7"	"100.000"	"61.7106"	"19652"	"19652"	"19635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.9"	""	"199.2"	""	"211.4"	""	"218.8"	"3.0"	"247.9"	"255.0"	""	"729"	"39"	"35.000"	"28.000"	"0.00449466711711937"	""	"0.0001859"	"0.0003423"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWSEELFK"	"[K].vWSEELFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"748.43146"	"1495.85564"	"1495.85609"	"-0.30"	"-0.00022"	"14/60"	"14"	"60"	"909515.615234375"	"HCD"	"MS2"	"23.43452"	"86.2"	"100.000"	"61.6347"	"19567"	"19567"	"19545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.7"	""	"123.4"	""	"127.2"	""	"128.5"	""	"160.0"	"162.3"	""	"732"	"29"	"35.000"	"28.000"	"0.0507552633367111"	"28"	"0.0001308"	"0.0002605"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPANPNLQK"	"[K].vGPANPNLQk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7385"	"0.0000"	"1"	"1"	"1"	"748.45233"	"1495.89739"	"1495.89968"	"-1.54"	"-0.00115"	"9/84"	"9"	"84"	"5127121.61816406"	"HCD"	"MS2"	"0"	"358.7"	"100.000"	"33.9900"	"8313"	"8313"	"8300"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"724.1"	""	"480.7"	""	"508.4"	""	"580.5"	"1.3"	"546.4"	"544.3"	""	"514"	"65"	"34.000"	"27.000"	"8.39330728682903E-06"	""	"0"	"4.676E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPANPNLQK"	"[K].vGPANPNLQk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7612"	"0.0000"	"1"	"1"	"1"	"748.45306"	"1495.89885"	"1495.89968"	"-0.56"	"-0.00042"	"9/84"	"9"	"84"	"4201585.93383789"	"HCD"	"MS2"	"0"	"292.2"	"100.000"	"34.0404"	"8378"	"8378"	"8359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"616.4"	""	"343.2"	""	"422.0"	""	"510.6"	""	"422.1"	"443.1"	""	"491"	"67"	"33.000"	"26.000"	"4.39593737165665E-06"	""	"0"	"4.877E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVFQQGMK"	"[R].nSVFQQGMk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"3"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06687; P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"748.91913"	"1496.83098"	"1496.82955"	"0.95"	"0.00071"	"8/80"	"8"	"80"	"563966.065307617"	"HCD"	"MS2"	"0"	"59.9"	"100.000"	"36.6106"	"9430"	"9430"	"9401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.6"	""	"83.7"	""	"80.3"	""	"77.2"	"2.6"	"120.3"	"117.9"	""	"816"	"43"	"36.000"	"29.000"	"0.00206376462097271"	"21"	"0"	"5.827E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSTEAISIMR"	"[R].fLSTEAISIMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08874"	"Serine/threonine-protein kinase N2 OS=Rattus norvegicus OX=10116 GN=Pkn2 PE=1 SV=2"	"O08874"	"Serine/threonine-protein kinase N2 OS=Rattus norvegicus OX=10116 GN=Pkn2 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"748.91980"	"1496.83232"	"1496.83442"	"-1.40"	"-0.00105"	"6/90"	"6"	"90"	"1278489.36785889"	"HCD"	"MS2"	"47.26469"	"91.5"	"100.000"	"63.6715"	"20399"	"20399"	"20377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.0"	""	"123.2"	""	"129.0"	""	"142.3"	"1.1"	"174.8"	"175.1"	""	"782"	"21"	"35.000"	"28.000"	"0.342907321067161"	"26"	"0.0001859"	"0.0003217"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSTEAISIMR"	"[R].fLSTEAISIMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08874"	"Serine/threonine-protein kinase N2 OS=Rattus norvegicus OX=10116 GN=Pkn2 PE=1 SV=2"	"O08874"	"Serine/threonine-protein kinase N2 OS=Rattus norvegicus OX=10116 GN=Pkn2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"748.92029"	"1496.83330"	"1496.83442"	"-0.75"	"-0.00056"	"16/90"	"16"	"90"	"1405433.20800781"	"HCD"	"MS2"	"38.22959"	"99.9"	"100.000"	"63.7296"	"20476"	"20476"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.5"	""	"129.8"	""	"142.3"	""	"156.6"	""	"180.5"	"204.8"	""	"762"	"20"	"35.000"	"28.000"	"0.374045966290614"	"23"	"0.0001889"	"0.0006721"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSDGLFLQK"	"[R].mSDGLFLQk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"748.93066"	"1496.85405"	"1496.85471"	"-0.44"	"-0.00033"	"8/68"	"8"	"68"	"4627566.41094971"	"HCD"	"MS2"	"0"	"370.2"	"100.000"	"52.4572"	"15843"	"15843"	"15826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"701.9"	""	"551.9"	""	"576.7"	""	"379.1"	""	"628.7"	"663.5"	""	"757"	"49"	"35.000"	"28.000"	"0.000466730179377141"	"21"	"0.0001308"	"0.0002398"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSDGLFLQK"	"[R].mSDGLFLQk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"748.93079"	"1496.85430"	"1496.85471"	"-0.27"	"-0.00021"	"8/68"	"8"	"68"	"4642940.44207764"	"HCD"	"MS2"	"0"	"389.7"	"100.000"	"52.6672"	"15978"	"15978"	"15958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"746.8"	""	"583.6"	""	"607.4"	""	"397.2"	""	"643.4"	"706.5"	""	"752"	"49"	"35.000"	"28.000"	"0.000461517150915561"	"21"	"0"	"0.0001474"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSNMMLQYR"	"[K].lLSNMMLQYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.40900"	"1497.81072"	"1497.81191"	"-0.79"	"-0.00060"	"8/84"	"8"	"84"	"3303107.97332764"	"HCD"	"MS2"	"10.37625"	"211.8"	"100.000"	"61.5537"	"19588"	"19588"	"19571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"340.8"	""	"323.0"	""	"348.3"	""	"277.0"	""	"335.3"	"381.2"	""	"907"	"51"	"36.000"	"29.000"	"0.000385991100324777"	"16"	"0"	"7.588E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSNMMLQYR"	"[K].lLSNMMLQYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.40979"	"1497.81230"	"1497.81191"	"0.26"	"0.00020"	"6/84"	"6"	"84"	"3191966.35644531"	"HCD"	"MS2"	"17.89422"	"197.8"	"100.000"	"61.3901"	"19467"	"19467"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"318.4"	""	"308.5"	""	"310.5"	""	"263.3"	""	"324.3"	"347.9"	""	"901"	"42"	"36.000"	"29.000"	"0.00285558304921246"	"15"	"0"	"5.845E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"749.41193"	"1497.81658"	"1497.82010"	"-2.35"	"-0.00176"	"12/76"	"12"	"76"	"780462.585205078"	"HCD"	"MS2"	"0"	"82.5"	"100.000"	"37.1063"	"9590"	"9590"	"9562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.4"	""	"106.9"	""	"127.4"	""	"104.1"	""	"150.2"	"165.1"	""	"862"	"27"	"36.000"	"29.000"	"0.0809985548042208"	"23"	"0.0001308"	"0.0002758"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"749.41284"	"1497.81841"	"1497.82010"	"-1.13"	"-0.00084"	"13/76"	"13"	"76"	"2189469.37908936"	"HCD"	"MS2"	"0"	"182.7"	"100.000"	"37.1449"	"9649"	"9649"	"9622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"304.4"	""	"244.3"	""	"294.1"	""	"236.1"	""	"311.5"	"340.0"	""	"871"	"43"	"36.000"	"29.000"	"0.00200903803721045"	"28"	"0.0001308"	"0.0002889"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLMMYISk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"749.43079"	"1497.85430"	"1497.85735"	"-2.04"	"-0.00153"	"8/64"	"8"	"64"	"663835.127868652"	"HCD"	"MS2"	"20.83588"	"68.6"	"100.000"	"60.8391"	"19296"	"19296"	"19267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.9"	""	"108.4"	""	"107.2"	""	"90.3"	""	"105.3"	"116.6"	""	"786"	"11"	"35.000"	"28.000"	"3.20916871943926"	"15"	"0.0006037"	"0.004278"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLMMYISk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"749.43152"	"1497.85576"	"1497.85735"	"-1.06"	"-0.00079"	"14/64"	"14"	"64"	"2288868.24658203"	"HCD"	"MS2"	"33.91225"	"195.0"	"100.000"	"60.1679"	"19022"	"19022"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"356.5"	""	"293.3"	""	"311.5"	""	"251.4"	"0.8"	"303.7"	"324.8"	""	"777"	"40"	"35.000"	"28.000"	"0.00390293234523157"	"21"	"0"	"0.0001369"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLMMYISk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.43182"	"1497.85637"	"1497.85735"	"-0.65"	"-0.00049"	"6/64"	"6"	"64"	"1798734.26373291"	"HCD"	"MS2"	"37.73224"	"156.6"	"100.000"	"60.0000"	"18900"	"18900"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.4"	""	"230.2"	""	"220.8"	""	"231.5"	""	"268.2"	"293.1"	""	"748"	"17"	"35.000"	"28.000"	"0.696420589111913"	"14"	"0.0001889"	"0.0008293"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLMMYISk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"749.43195"	"1497.85661"	"1497.85735"	"-0.49"	"-0.00037"	"14/64"	"14"	"64"	"4839182.66210938"	"HCD"	"MS2"	"9.894294"	"392.8"	"100.000"	"60.4564"	"19140"	"19140"	"19123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"746.8"	""	"655.5"	""	"647.4"	""	"425.0"	"3.0"	"594.5"	"636.5"	""	"758"	"41"	"35.000"	"28.000"	"0.00312348345589928"	"24"	"0"	"0.0001775"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLMMYISk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"499.95712"	"1497.85682"	"1497.85735"	"-0.36"	"-0.00018"	"9/64"	"9"	"64"	"3602838.89050293"	"HCD"	"MS2"	"30.17985"	"108.7"	"100.000"	"60.2901"	"19072"	"19072"	"19043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.0"	""	"155.1"	""	"161.1"	""	"150.0"	""	"187.9"	"192.7"	""	"758"	"23"	"35.000"	"28.000"	"0.182238113062447"	"17"	"0.0003146"	"0.001466"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLMMYISk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"499.95721"	"1497.85709"	"1497.85735"	"-0.17"	"-0.00009"	"11/64"	"11"	"64"	"3320262.24188232"	"HCD"	"MS2"	"24.82342"	"101.1"	"100.000"	"60.1221"	"18950"	"18950"	"18921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.0"	""	"128.0"	""	"148.6"	""	"148.1"	"0.5"	"173.9"	"181.1"	""	"735"	"28"	"35.000"	"28.000"	"0.0611304149011038"	"14"	"0.0001889"	"0.0005914"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLMMYISk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"749.43317"	"1497.85906"	"1497.85735"	"1.14"	"0.00085"	"14/64"	"14"	"64"	"4967853.7097168"	"HCD"	"MS2"	"1.352177"	"419.2"	"100.000"	"60.2884"	"19018"	"19018"	"19001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"792.6"	""	"683.4"	""	"724.2"	""	"437.3"	""	"614.8"	"708.6"	""	"737"	"41"	"35.000"	"28.000"	"0.00305800007829065"	"22"	"0.0001308"	"0.0002944"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPLLDVLADSR"	"[R].lGPLLDVLADSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"749.44489"	"1497.88249"	"1497.88381"	"-0.88"	"-0.00066"	"11/98"	"11"	"98"	"671418.553283691"	"HCD"	"MS2"	"25.88868"	"31.4"	"100.000"	"79.3492"	"26780"	"26780"	"26753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.4"	""	"39.6"	""	"42.4"	""	"44.8"	"0.6"	"70.5"	"60.0"	""	"572"	"43"	"34.000"	"27.000"	"0.00150094933631435"	"18"	"0"	"7.565E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLQNLVNLR"	"[K].iEGLQNLVNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"499.96909"	"1497.89270"	"1497.89504"	"-1.56"	"-0.00078"	"12/92"	"12"	"92"	"1655754.57348633"	"HCD"	"MS2"	"15.6816"	"24.1"	"100.000"	"64.7160"	"20879"	"20879"	"20851"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.2"	""	"32.6"	""	"36.4"	""	"36.7"	"1.3"	"44.4"	"45.4"	""	"479"	"48"	"33.000"	"26.000"	"0.000370941580229539"	"25"	"0.0001308"	"0.0002418"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLQNLVNLR"	"[K].iEGLQNLVNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"749.45050"	"1497.89372"	"1497.89504"	"-0.88"	"-0.00066"	"7/92"	"7"	"92"	"1616437.5067749"	"HCD"	"MS2"	"0"	"92.3"	"100.000"	"64.6053"	"20834"	"20834"	"20803"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.5"	""	"141.3"	""	"125.9"	""	"142.9"	""	"169.7"	"164.0"	""	"472"	"26"	"33.000"	"26.000"	"0.054564729048144"	"15"	"0"	"0.0001603"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLQNLVNLR"	"[K].iEGLQNLVNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"499.96960"	"1497.89426"	"1497.89504"	"-0.52"	"-0.00026"	"13/92"	"13"	"92"	"763987.387512207"	"HCD"	"MS2"	"21.24324"	"24.3"	"100.000"	"64.8672"	"20888"	"20888"	"20857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.0"	""	"29.0"	""	"28.9"	""	"48.5"	""	"49.1"	"53.0"	""	"472"	"33"	"33.000"	"26.000"	"0.0129691646230399"	"20"	"0.0001308"	"0.0002275"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLQNLVNLR"	"[K].iEGLQNLVNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"749.45111"	"1497.89495"	"1497.89504"	"-0.07"	"-0.00005"	"10/92"	"10"	"92"	"1968359.99780273"	"HCD"	"MS2"	"6.219686"	"115.0"	"100.000"	"64.6550"	"20801"	"20801"	"20777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.6"	""	"158.2"	""	"169.8"	""	"168.9"	""	"225.3"	"207.1"	""	"471"	"32"	"33.000"	"26.000"	"0.0135828502128875"	"17"	"0"	"3.528E-05"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFQLPTPPLSR"	"[K].lFQLPTPPLSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXM5"	"Choline/ethanolaminephosphotransferase 1 OS=Rattus norvegicus OX=10116 GN=Cept1 PE=2 SV=1"	"Q6AXM5"	"Choline/ethanolaminephosphotransferase 1 OS=Rattus norvegicus OX=10116 GN=Cept1 PE=2 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"749.45331"	"1497.89934"	"1497.89907"	"0.18"	"0.00014"	"9/104"	"9"	"104"	"1148462.59509277"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"66.9798"	"21803"	"21803"	"21779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.5"	""	"70.2"	""	"76.2"	""	"106.2"	"0.3"	"107.8"	"129.6"	""	"434"	"25"	"33.000"	"26.000"	"0.0658354386970157"	"17"	"0.0001889"	"0.0006845"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QALVAIFTHLR"	"[R].qALVAIFTHLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.6829"	"0.0000"	"1"	"1"	"1"	"499.97430"	"1497.90836"	"1497.91030"	"-1.29"	"-0.00065"	"8/100"	"8"	"100"	"1120029.42364502"	"HCD"	"MS2"	"54.52879"	"26.1"	"100.000"	"62.6467"	"20034"	"20034"	"20003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.4"	""	"25.3"	""	"35.5"	""	"52.7"	""	"49.6"	"51.4"	""	"373"	"41"	"32.000"	"25.000"	"0.00143112917765979"	""	"0"	"2.138E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLELPIVK"	"[R].dLLELPIVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.48590"	"1497.96453"	"1497.96564"	"-0.74"	"-0.00056"	"9/70"	"9"	"70"	"831920.107666016"	"HCD"	"MS2"	"44.01641"	"55.5"	"100.000"	"70.5542"	"23253"	"23253"	"23226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.1"	""	"57.6"	""	"78.4"	""	"85.3"	""	"114.3"	"108.7"	""	"170"	"14"	"29.000"	"22.000"	"0.318727051908661"	"13"	"0.0002277"	"0.001117"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLELPIVK"	"[R].dLLELPIVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.48639"	"1497.96550"	"1497.96564"	"-0.09"	"-0.00007"	"9/70"	"9"	"70"	"942646.226135254"	"HCD"	"MS2"	"54.04809"	"62.2"	"100.000"	"70.6157"	"23226"	"23226"	"23203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.8"	""	"71.7"	""	"87.2"	""	"97.9"	""	"124.9"	"133.0"	""	"165"	"17"	"29.000"	"22.000"	"0.16049220673387"	"14"	"0.0002277"	"0.001236"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPTYVMMPR"	"[K].fQPTYVMMPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"749.89032"	"1498.77336"	"1498.77479"	"-0.95"	"-0.00072"	"14/88"	"14"	"88"	"2964814.98345947"	"HCD"	"MS2"	"16.23368"	"179.9"	"100.000"	"51.4352"	"15475"	"15475"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"311.4"	""	"297.3"	""	"255.6"	""	"193.1"	""	"341.2"	"308.1"	""	"707"	"19"	"35.000"	"28.000"	"0.48796583753712"	"27"	"0.0001859"	"0.0003634"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPTYVMMPR"	"[K].fQPTYVMMPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"749.89081"	"1498.77434"	"1498.77479"	"-0.30"	"-0.00023"	"8/88"	"8"	"88"	"2628809.1239624"	"HCD"	"MS2"	"25.14278"	"162.0"	"100.000"	"51.2283"	"15340"	"15340"	"15314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"268.3"	""	"269.2"	""	"222.9"	""	"186.3"	""	"312.1"	"275.7"	""	"704"	"18"	"35.000"	"28.000"	"0.584174591418021"	"24"	"0"	"0.000177"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIAFDFHK"	"[R].yIAFDFHk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"500.28650"	"1498.84494"	"1498.84586"	"-0.61"	"-0.00030"	"6/56"	"6"	"56"	"9359148.90179443"	"HCD"	"MS2"	"24.44269"	"322.3"	"100.000"	"49.2823"	"14554"	"14554"	"14527"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"423.8"	""	"498.2"	""	"507.5"	""	"486.0"	"3.9"	"559.5"	"572.0"	""	"868"	"20"	"36.000"	"29.000"	"0.408780084890913"	"15"	"0.0003839"	"0.001734"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVDLYGAQK"	"[R].fVDLYGAQk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"749.93695"	"1498.86662"	"1498.86699"	"-0.24"	"-0.00018"	"16/66"	"16"	"66"	"6099562.79333496"	"HCD"	"MS2"	"0"	"520.2"	"100.000"	"49.5495"	"14659"	"14659"	"14639"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"781.1"	""	"742.2"	""	"757.9"	""	"870.8"	"9.0"	"877.6"	"883.6"	""	"707"	"55"	"35.000"	"28.000"	"0.000108240407380965"	"21"	"0"	"0.0001526"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVDLYGAQK"	"[R].fVDLYGAQk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"749.93707"	"1498.86687"	"1498.86699"	"-0.08"	"-0.00006"	"16/66"	"16"	"66"	"4846061.35192871"	"HCD"	"MS2"	"2.344772"	"409.0"	"100.000"	"49.8339"	"14822"	"14822"	"14798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"605.1"	""	"588.3"	""	"578.9"	""	"724.6"	""	"692.5"	"680.4"	""	"702"	"54"	"35.000"	"28.000"	"0.000128916087474828"	"27"	"0.0001308"	"0.000243"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADGIVSHLK"	"[R].tADGIVSHLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.5217"	"0.0000"	"1"	"1"	"1"	"500.30414"	"1498.89786"	"1498.89935"	"-0.99"	"-0.00050"	"8/84"	"8"	"84"	"26743971.5526123"	"HCD"	"MS2"	"10.6217"	"451.4"	"54.619"	"36.1938"	"9215"	"9215"	"9194"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"651.8"	""	"627.0"	""	"642.1"	""	"712.8"	""	"807.6"	"836.8"	""	"520"	"46"	"34.000"	"27.000"	"0.000603911567052847"	""	"0"	"1.759E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADGIVSHLK"	"[R].tADGIVSHLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.5319"	"0.0000"	"1"	"1"	"1"	"500.30450"	"1498.89896"	"1498.89935"	"-0.26"	"-0.00013"	"9/84"	"9"	"84"	"27940958.2054443"	"HCD"	"MS2"	"10.04804"	"416.0"	"48.538"	"36.2789"	"9293"	"9293"	"9273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"611.1"	""	"571.0"	""	"593.9"	""	"688.8"	""	"724.6"	"749.6"	""	"517"	"47"	"34.000"	"27.000"	"0.000492561595593499"	""	"0"	"3.478E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLAAAVFTK"	"[K].yGLAAAVFTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"500.30557"	"1498.90216"	"1498.90337"	"-0.81"	"-0.00040"	"7/72"	"7"	"72"	"4358141.58148193"	"HCD"	"MS2"	"0"	"132.7"	"100.000"	"58.4449"	"18269"	"18269"	"18250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.2"	""	"202.1"	""	"220.7"	""	"198.0"	"0.3"	"219.9"	"255.1"	""	"481"	"39"	"33.000"	"26.000"	"0.00317040745622816"	"21"	"0"	"0.0001449"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLAAAVFTK"	"[K].yGLAAAVFTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"500.30573"	"1498.90262"	"1498.90337"	"-0.50"	"-0.00025"	"7/72"	"7"	"72"	"2620033.37774658"	"HCD"	"MS2"	"6.729071"	"87.0"	"100.000"	"58.6740"	"18413"	"18413"	"18389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.1"	""	"129.7"	""	"126.3"	""	"140.0"	""	"146.3"	"170.1"	""	"467"	"36"	"33.000"	"26.000"	"0.00625585803845244"	"20"	"0"	"0.0001627"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLAAAVFTK"	"[K].yGLAAAVFTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"500.30579"	"1498.90281"	"1498.90337"	"-0.38"	"-0.00019"	"7/72"	"7"	"72"	"14496071.6622925"	"HCD"	"MS2"	"16.53767"	"395.6"	"100.000"	"58.3086"	"18267"	"18267"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"516.9"	""	"615.7"	""	"675.4"	""	"593.9"	"1.1"	"622.1"	"717.2"	""	"467"	"48"	"33.000"	"26.000"	"0.000359987055763723"	"21"	"0"	"8.689E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLAAAVFTK"	"[K].yGLAAAVFTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"749.95514"	"1498.90300"	"1498.90337"	"-0.25"	"-0.00019"	"9/72"	"9"	"72"	"11251221.6237183"	"HCD"	"MS2"	"23.94589"	"777.4"	"100.000"	"58.2993"	"18263"	"18263"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1065.6"	""	"1220.6"	""	"1282.7"	""	"1195.2"	"0.0"	"1225.2"	"1362.0"	""	"467"	"65"	"33.000"	"26.000"	"7.96685448637203E-06"	"21"	"0"	"4.998E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLAAAVFTK"	"[K].yGLAAAVFTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"749.95526"	"1498.90325"	"1498.90337"	"-0.08"	"-0.00006"	"9/72"	"9"	"72"	"11158589.4589844"	"HCD"	"MS2"	"18.38481"	"817.6"	"100.000"	"58.1376"	"18143"	"18143"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1071.1"	""	"1255.7"	""	"1372.4"	""	"1253.7"	"6.6"	"1303.3"	"1471.7"	""	"465"	"63"	"33.000"	"26.000"	"1.22580942780806E-05"	"21"	"0"	"4.977E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLAAAVFTK"	"[K].yGLAAAVFTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"500.30603"	"1498.90354"	"1498.90337"	"0.11"	"0.00006"	"7/72"	"7"	"72"	"15591301.9979248"	"HCD"	"MS2"	"11.63368"	"431.8"	"100.000"	"58.1489"	"18148"	"18148"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"569.2"	""	"690.4"	""	"746.0"	""	"648.1"	""	"664.0"	"768.9"	""	"465"	"48"	"33.000"	"26.000"	"0.000359271657192681"	"21"	"0"	"0.0001306"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGGIEPMLK"	"[K].vPGGIEPMLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.95593"	"1498.90459"	"1498.90674"	"-1.44"	"-0.00108"	"8/72"	"8"	"72"	"1892757.0098877"	"HCD"	"MS2"	"36.83498"	"118.3"	"100.000"	"51.3499"	"15440"	"15440"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.9"	""	"191.7"	""	"171.5"	""	"144.9"	"0.3"	"217.1"	"202.0"	""	"448"	"7"	"33.000"	"26.000"	"4.35760658283476"	"13"	"0.003197"	"0.06469"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLDNLNVR"	"[R].tLVLLDNLNVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"500.30933"	"1498.91343"	"1498.91544"	"-1.35"	"-0.00067"	"10/98"	"10"	"98"	"3226230.91882324"	"HCD"	"MS2"	"19.45394"	"72.7"	"100.000"	"63.9001"	"20546"	"20546"	"20515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.6"	""	"114.1"	""	"104.6"	""	"104.3"	"0.1"	"129.5"	"137.3"	""	"417"	"22"	"33.000"	"26.000"	"0.12448185725273"	"21"	"0.0001889"	"0.0007603"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLDNLNVR"	"[R].tLVLLDNLNVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.8551"	"0.0000"	"1"	"1"	"1"	"749.96039"	"1498.91350"	"1498.91544"	"-1.30"	"-0.00097"	"9/98"	"9"	"98"	"2512334.63171387"	"HCD"	"MS2"	"27.86827"	"134.9"	"100.000"	"63.8011"	"20505"	"20505"	"20483"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.8"	""	"172.2"	""	"182.6"	""	"242.5"	""	"265.5"	"263.8"	""	"417"	"69"	"33.000"	"26.000"	"2.77399746148432E-06"	""	"0"	"2.038E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLDNLNVR"	"[R].tLVLLDNLNVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"500.30939"	"1498.91361"	"1498.91544"	"-1.22"	"-0.00061"	"13/98"	"13"	"98"	"2534117.30169678"	"HCD"	"MS2"	"11.08222"	"32.7"	"100.000"	"63.7982"	"20451"	"20451"	"20425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.2"	""	"38.1"	""	"47.6"	""	"56.1"	""	"62.5"	"66.1"	""	"417"	"54"	"33.000"	"26.000"	"8.73184583270859E-05"	""	"0.0001308"	"0.0002133"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFTPLHVAAK"	"[K].gFTPLHVAAk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"500.30939"	"1498.91361"	"1498.91461"	"-0.67"	"-0.00033"	"12/72"	"12"	"72"	"11987489.7260742"	"HCD"	"MS2"	"49.48053"	"482.6"	"100.000"	"36.7374"	"9438"	"9438"	"9418"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"642.3"	""	"618.2"	""	"614.2"	""	"825.0"	"1.9"	"954.9"	"921.0"	""	"417"	"20"	"33.000"	"26.000"	"0.205166315551196"	"15"	"0.0001889"	"0.0004442"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVLLDNLNVR"	"[R].tLVLLDNLNVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"749.96112"	"1498.91496"	"1498.91544"	"-0.32"	"-0.00024"	"9/98"	"9"	"98"	"2162763.06536865"	"HCD"	"MS2"	"32.42165"	"121.6"	"100.000"	"63.7222"	"20420"	"20420"	"20393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.2"	""	"156.2"	""	"160.5"	""	"218.7"	""	"231.7"	"240.5"	""	"404"	"52"	"33.000"	"26.000"	"0.000132846883145795"	"25"	"0"	"2.146E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFTPLHVAAK"	"[K].gFTPLHVAAk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"500.30991"	"1498.91516"	"1498.91461"	"0.37"	"0.00019"	"12/72"	"12"	"72"	"13743469.4685059"	"HCD"	"MS2"	"30.62976"	"466.7"	"88.280"	"36.8719"	"9537"	"9537"	"9510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"640.3"	""	"600.2"	""	"602.2"	""	"757.6"	""	"908.2"	"922.8"	""	"404"	"22"	"33.000"	"26.000"	"0.127747193977996"	"15"	"0.0001308"	"0.0002261"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPQGNTIK"	"[K].iLGPQGNTIk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91V33"	"KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Khdrbs1 PE=1 SV=1"	"Q91V33"	"KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Khdrbs1 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"749.97076"	"1498.93425"	"1498.93573"	"-0.99"	"-0.00074"	"9/82"	"9"	"82"	"3267173.26574707"	"HCD"	"MS2"	"0"	"246.9"	"100.000"	"39.8904"	"10774"	"10774"	"10750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"392.7"	""	"362.5"	""	"325.0"	""	"356.0"	""	"462.0"	"444.7"	""	"342"	"48"	"32.000"	"25.000"	"0.000267298246891603"	"24"	"7.476E-05"	"0.000189"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPQGNTIK"	"[K].iLGPQGNTIk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q91V33"	"KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Khdrbs1 PE=1 SV=1"	"Q91V33"	"KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Khdrbs1 PE=1 SV=1"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"749.97113"	"1498.93498"	"1498.93573"	"-0.50"	"-0.00038"	"8/82"	"8"	"82"	"3507321.79608154"	"HCD"	"MS2"	"29.4584"	"265.7"	"100.000"	"39.7899"	"10692"	"10692"	"10661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"469.0"	""	"369.5"	""	"350.7"	""	"387.3"	"2.4"	"469.9"	"465.6"	""	"342"	"56"	"32.000"	"25.000"	"4.69889900180509E-05"	""	"0"	"0.0001357"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISYLISGYQR"	"[K].aISYLISGYQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"500.61746"	"1499.83783"	"1499.84194"	"-2.74"	"-0.00137"	"12/90"	"12"	"90"	"4385208.56152344"	"HCD"	"MS2"	"59.30235"	"51.1"	"100.000"	"53.4706"	"16244"	"16244"	"16235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.4"	""	"72.8"	""	"68.2"	""	"93.2"	"0.0"	"92.7"	"88.0"	""	"834"	"22"	"36.000"	"29.000"	"0.291834112332948"	"16"	"0.0006037"	"0.004658"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISYLISGYQR"	"[K].aISYLISGYQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"750.42297"	"1499.83867"	"1499.84194"	"-2.18"	"-0.00164"	"8/90"	"8"	"90"	"2017229.09851074"	"HCD"	"MS2"	"0"	"114.0"	"100.000"	"53.2919"	"16176"	"16176"	"16164"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.8"	""	"205.7"	""	"145.7"	""	"195.7"	"1.0"	"167.8"	"160.6"	""	"841"	"52"	"36.000"	"29.000"	"0.000261677269913631"	"21"	"0"	"9.714E-06"	"1.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISYLISGYQR"	"[K].aISYLISGYQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"750.42303"	"1499.83879"	"1499.84194"	"-2.10"	"-0.00158"	"8/90"	"8"	"90"	"2381256.3137207"	"HCD"	"MS2"	"0"	"131.1"	"100.000"	"53.5028"	"16314"	"16314"	"16298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.3"	""	"256.0"	""	"166.0"	""	"208.7"	"1.6"	"191.2"	"190.5"	""	"841"	"52"	"36.000"	"29.000"	"0.000294283559318956"	"22"	"0"	"1.885E-05"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISYLISGYQR"	"[K].aISYLISGYQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"500.61789"	"1499.83911"	"1499.84194"	"-1.89"	"-0.00094"	"12/90"	"12"	"90"	"7544089.44055176"	"HCD"	"MS2"	"0"	"80.6"	"100.000"	"53.7522"	"16354"	"16354"	"16339"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.2"	""	"112.1"	""	"104.7"	""	"150.1"	""	"159.7"	"148.7"	""	"829"	"36"	"36.000"	"29.000"	"0.0115219114948622"	"17"	"0.0001889"	"0.0008877"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISYLISGYQR"	"[K].aISYLISGYQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"500.61807"	"1499.83966"	"1499.84194"	"-1.52"	"-0.00076"	"9/90"	"9"	"90"	"5700980.31188965"	"HCD"	"MS2"	"0"	"55.5"	"94.463"	"53.7411"	"16405"	"16405"	"16396"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.5"	""	"82.8"	""	"76.2"	""	"98.1"	"1.9"	"103.4"	"88.6"	""	"842"	"27"	"36.000"	"29.000"	"0.0834222877863946"	"20"	"0.0002277"	"0.001316"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISYLISGYQR"	"[K].aISYLISGYQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.42365"	"1499.84001"	"1499.84194"	"-1.29"	"-0.00097"	"10/90"	"10"	"90"	"5486036.23504639"	"HCD"	"MS2"	"0"	"268.9"	"100.000"	"53.5623"	"16279"	"16279"	"16271"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"456.3"	""	"573.5"	""	"355.5"	""	"420.9"	""	"380.2"	"352.8"	""	"842"	"31"	"36.000"	"29.000"	"0.0302191396625243"	"14"	"0"	"3.31E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISYLISGYQR"	"[K].aISYLISGYQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"750.42377"	"1499.84026"	"1499.84194"	"-1.12"	"-0.00084"	"9/90"	"9"	"90"	"6337874.9229126"	"HCD"	"MS2"	"0"	"289.0"	"100.000"	"53.7707"	"16416"	"16416"	"16409"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"519.9"	""	"629.9"	""	"371.2"	""	"442.2"	"0.7"	"393.4"	"367.3"	""	"841"	"55"	"36.000"	"29.000"	"0.000134823625095455"	"19"	"0"	"1.964E-05"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFEILSPVYR"	"[K].fFEILSPVYR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O35346"	"Focal adhesion kinase 1 OS=Rattus norvegicus OX=10116 GN=Ptk2 PE=1 SV=1"	"O35346"	"Focal adhesion kinase 1 OS=Rattus norvegicus OX=10116 GN=Ptk2 PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"750.42584"	"1499.84441"	"1499.84597"	"-1.04"	"-0.00078"	"7/78"	"7"	"78"	"965360.966430664"	"HCD"	"MS2"	"14.73459"	"55.1"	"100.000"	"75.1663"	"25084"	"25084"	"25057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.5"	""	"74.9"	""	"98.6"	""	"95.8"	"2.0"	"91.3"	"93.9"	""	"856"	"28"	"36.000"	"29.000"	"0.0700557471171103"	"26"	"0.0001889"	"0.0005249"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFEILSPVYR"	"[K].fFEILSPVYR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O35346"	"Focal adhesion kinase 1 OS=Rattus norvegicus OX=10116 GN=Ptk2 PE=1 SV=1"	"O35346"	"Focal adhesion kinase 1 OS=Rattus norvegicus OX=10116 GN=Ptk2 PE=1 SV=1"	"0"	"2"	"2"	"0.2121"	"0.0000"	"1"	"1"	"1"	"750.42633"	"1499.84538"	"1499.84597"	"-0.39"	"-0.00029"	"6/78"	"6"	"78"	"1007829.10699463"	"HCD"	"MS2"	"12.38634"	"57.4"	"100.000"	"75.1590"	"25133"	"25133"	"25103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.8"	""	"82.2"	""	"88.8"	""	"101.8"	"3.1"	"100.6"	"99.7"	""	"844"	"33"	"36.000"	"29.000"	"0.0207163123736398"	""	"0.0001889"	"0.000554"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMEQVIFK"	"[R].fMEQVIFk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"750.43756"	"1499.86785"	"1499.86963"	"-1.19"	"-0.00089"	"6/64"	"6"	"64"	"8436034.65332031"	"HCD"	"MS2"	"31.54925"	"638.1"	"100.000"	"63.9555"	"20568"	"20568"	"20547"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"925.2"	""	"1084.5"	""	"1019.7"	""	"771.1"	"1.1"	"1084.7"	"1151.7"	""	"728"	"37"	"35.000"	"28.000"	"0.00721275837393055"	"25"	"0.0001889"	"0.0007206"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMEQVIFK"	"[R].fMEQVIFk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"750.43781"	"1499.86833"	"1499.86963"	"-0.86"	"-0.00065"	"6/64"	"6"	"64"	"7814258.43267822"	"HCD"	"MS2"	"34.72226"	"581.8"	"100.000"	"63.9041"	"20494"	"20494"	"20473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"829.6"	""	"970.9"	""	"901.5"	""	"739.4"	""	"1013.0"	"1055.3"	""	"699"	"39"	"35.000"	"28.000"	"0.00419225006450708"	"25"	"0.0002277"	"0.001248"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMEQVIFK"	"[R].fMEQVIFk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"750.43805"	"1499.86882"	"1499.86963"	"-0.54"	"-0.00040"	"7/64"	"7"	"64"	"3216184.62615967"	"HCD"	"MS2"	"17.21551"	"226.7"	"100.000"	"64.2618"	"20693"	"20693"	"20675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.2"	""	"338.5"	""	"335.5"	""	"299.2"	""	"436.7"	"452.5"	""	"710"	"36"	"35.000"	"28.000"	"0.00942384974501317"	"22"	"0.0001889"	"0.0004996"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMEQVIFK"	"[R].fMEQVIFk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"500.62781"	"1499.86887"	"1499.86963"	"-0.51"	"-0.00025"	"6/64"	"6"	"64"	"3304725.74328613"	"HCD"	"MS2"	"21.01369"	"126.5"	"100.000"	"64.0353"	"20548"	"20548"	"20521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.8"	""	"210.2"	""	"216.0"	""	"162.0"	""	"217.7"	"224.5"	""	"710"	"26"	"35.000"	"28.000"	"0.0834119651401149"	"20"	"0.0001889"	"0.001086"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMEQVIFK"	"[R].fMEQVIFk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"500.62784"	"1499.86896"	"1499.86963"	"-0.45"	"-0.00022"	"5/64"	"5"	"64"	"4102209.11224365"	"HCD"	"MS2"	"53.5265"	"134.3"	"100.000"	"64.0015"	"20587"	"20587"	"20563"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.4"	""	"223.5"	""	"214.0"	""	"158.9"	""	"236.7"	"252.7"	""	"710"	"29"	"35.000"	"28.000"	"0.0457328590851063"	"25"	"0.0003839"	"0.001889"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMEQVIFK"	"[R].fMEQVIFk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"750.43835"	"1499.86943"	"1499.86963"	"-0.13"	"-0.00010"	"7/64"	"7"	"64"	"3204868.1751709"	"HCD"	"MS2"	"9.657597"	"244.0"	"100.000"	"64.2128"	"20620"	"20620"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"307.3"	""	"367.4"	""	"369.1"	""	"309.1"	"3.1"	"454.3"	"503.2"	""	"702"	"34"	"35.000"	"28.000"	"0.0129511137098123"	"22"	"0.0001889"	"0.0006597"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPTLGYSK"	"[K].yLPTLGYSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.63278"	"1499.88379"	"1499.88739"	"-2.40"	"-0.00120"	"8/72"	"8"	"72"	"1933829.05639648"	"HCD"	"MS2"	"17.28846"	"87.2"	"100.000"	"51.0417"	"15264"	"15264"	"15234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.4"	""	"121.1"	""	"122.9"	""	"135.0"	"1.3"	"160.9"	"163.3"	""	"638"	"14"	"35.000"	"28.000"	"1.34831287950727"	"13"	"0.000523"	"0.002873"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPTLGYSK"	"[K].yLPTLGYSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.63306"	"1499.88462"	"1499.88739"	"-1.85"	"-0.00092"	"8/72"	"8"	"72"	"2531468.60040283"	"HCD"	"MS2"	"17.58798"	"107.7"	"100.000"	"51.1959"	"15377"	"15377"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.7"	"3.6"	"152.1"	""	"166.8"	""	"158.9"	""	"206.9"	"201.6"	""	"611"	"20"	"34.000"	"27.000"	"0.337296018380083"	"14"	"0.0001889"	"0.0004519"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPTLGYSK"	"[K].yLPTLGYSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.44611"	"1499.88494"	"1499.88739"	"-1.63"	"-0.00123"	"8/72"	"8"	"72"	"2509985.82446289"	"HCD"	"MS2"	"0"	"173.2"	"100.000"	"51.0809"	"15330"	"15330"	"15302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"245.7"	""	"269.1"	""	"263.1"	""	"260.1"	"0.3"	"292.3"	"308.3"	""	"626"	"40"	"34.000"	"27.000"	"0.00317354263735581"	"15"	"0"	"0.0001659"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLVSYFGK"	"[K].lDLVSYFGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.63348"	"1499.88590"	"1499.88739"	"-0.99"	"-0.00050"	"9/70"	"9"	"70"	"491037.457763672"	"HCD"	"MS2"	"40.94474"	"19.2"	"100.000"	"73.5884"	"24492"	"24492"	"24463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.2"	""	"28.7"	""	"32.7"	""	"26.2"	""	"38.3"	"32.9"	""	"630"	"30"	"34.000"	"27.000"	"0.0284649584222525"	"14"	"0.0001889"	"0.0005871"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPTLGYSK"	"[K].yLPTLGYSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.44678"	"1499.88628"	"1499.88739"	"-0.74"	"-0.00055"	"8/72"	"8"	"72"	"2358277.63952637"	"HCD"	"MS2"	"25.53812"	"165.8"	"100.000"	"50.8761"	"15196"	"15196"	"15170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"256.4"	""	"267.3"	""	"266.2"	""	"231.4"	""	"250.4"	"297.4"	""	"630"	"42"	"34.000"	"27.000"	"0.00209079067176601"	"15"	"0"	"0.0001773"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEGSFVYK"	"[K].vIEGSFVYk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"500.63364"	"1499.88636"	"1499.88739"	"-0.69"	"-0.00034"	"7/68"	"7"	"68"	"10973688.3989258"	"HCD"	"MS2"	"56.20378"	"335.7"	"100.000"	"49.6012"	"14728"	"14728"	"14702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"450.7"	""	"543.9"	""	"528.6"	""	"509.1"	"0.9"	"565.5"	"577.6"	""	"630"	"34"	"34.000"	"27.000"	"0.0113582272551817"	"26"	"0.0003146"	"0.001419"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEGSFVYK"	"[K].vIEGSFVYk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"750.44702"	"1499.88677"	"1499.88739"	"-0.41"	"-0.00031"	"8/68"	"8"	"68"	"11745434.5392456"	"HCD"	"MS2"	"6.743426"	"858.8"	"100.000"	"49.5548"	"14709"	"14709"	"14686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1182.1"	""	"1432.6"	""	"1410.5"	""	"1227.9"	"5.4"	"1405.2"	"1459.1"	""	"618"	"54"	"34.000"	"27.000"	"0.000117478523463053"	"22"	"0.0001859"	"0.0003218"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEGSFVYK"	"[K].vIEGSFVYk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"500.63379"	"1499.88681"	"1499.88739"	"-0.38"	"-0.00019"	"7/68"	"7"	"68"	"9668028.79016113"	"HCD"	"MS2"	"45.79849"	"324.0"	"100.000"	"49.3537"	"14583"	"14583"	"14559"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"428.5"	""	"496.3"	""	"487.7"	""	"489.1"	"1.6"	"591.3"	"573.9"	""	"618"	"36"	"34.000"	"27.000"	"0.00829771433708479"	""	"0.0001889"	"0.0006336"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEGSFVYK"	"[K].vIEGSFVYk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"750.44714"	"1499.88701"	"1499.88739"	"-0.25"	"-0.00019"	"8/68"	"8"	"68"	"11111413.4081421"	"HCD"	"MS2"	"7.192641"	"847.2"	"100.000"	"49.2754"	"14551"	"14551"	"14527"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1182.7"	""	"1418.2"	""	"1400.8"	""	"1207.9"	""	"1369.2"	"1434.4"	""	"618"	"54"	"34.000"	"27.000"	"0.000121048240026305"	"22"	"0.0001308"	"0.0002394"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLVSYFGK"	"[K].lDLVSYFGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.63388"	"1499.88709"	"1499.88739"	"-0.20"	"-0.00010"	"10/70"	"10"	"70"	"678195.815063477"	"HCD"	"MS2"	"45.36252"	"24.5"	"100.000"	"73.5674"	"24432"	"24432"	"24401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.7"	""	"32.0"	""	"30.8"	""	"36.9"	"0.2"	"49.9"	"51.6"	""	"622"	"36"	"34.000"	"27.000"	"0.00788425004084849"	"15"	"0.0001308"	"0.0002643"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAATILTSPDLR"	"[R].iAATILTSPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"3"	"3"	"0.6271"	"0.0000"	"1"	"1"	"1"	"500.63739"	"1499.89762"	"1499.89946"	"-1.23"	"-0.00061"	"14/100"	"14"	"100"	"7334282.83874512"	"HCD"	"MS2"	"38.6558"	"72.0"	"100.000"	"56.7400"	"17572"	"17572"	"17547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.0"	""	"79.9"	""	"96.9"	""	"119.4"	"0.2"	"138.0"	"154.3"	""	"594"	"59"	"34.000"	"27.000"	"3.52173318205647E-05"	""	"0"	"8.559E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAATILTSPDLR"	"[R].iAATILTSPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"750.45264"	"1499.89800"	"1499.89946"	"-0.98"	"-0.00073"	"7/100"	"7"	"100"	"5933226.52996826"	"HCD"	"MS2"	"4.115881"	"221.0"	"100.000"	"56.9381"	"17707"	"17707"	"17685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.1"	""	"311.6"	""	"321.1"	""	"359.7"	""	"388.2"	"419.1"	""	"582"	"60"	"34.000"	"27.000"	"3.26507370201871E-05"	""	"0"	"4.2E-05"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAATILTSPDLR"	"[R].iAATILTSPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"750.45306"	"1499.89885"	"1499.89946"	"-0.41"	"-0.00030"	"7/100"	"7"	"100"	"2858146.32855225"	"HCD"	"MS2"	"2.207942"	"119.4"	"100.000"	"57.2422"	"17831"	"17831"	"17813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.6"	""	"167.6"	""	"183.0"	""	"176.5"	""	"207.4"	"217.4"	""	"582"	"59"	"34.000"	"27.000"	"3.35654898025937E-05"	""	"0"	"9.079E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAATILTSPDLR"	"[R].iAATILTSPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"750.45306"	"1499.89885"	"1499.89946"	"-0.41"	"-0.00030"	"7/100"	"7"	"100"	"5389892.23156738"	"HCD"	"MS2"	"9.289438"	"209.1"	"100.000"	"56.7331"	"17569"	"17569"	"17547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"282.2"	""	"275.8"	""	"307.3"	""	"341.8"	"4.2"	"378.4"	"391.0"	""	"582"	"59"	"34.000"	"27.000"	"3.28770611169784E-05"	""	"0"	"3.953E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAATILTSPDLR"	"[R].iAATILTSPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"500.63791"	"1499.89917"	"1499.89946"	"-0.19"	"-0.00010"	"14/100"	"14"	"100"	"3724439.55841064"	"HCD"	"MS2"	"7.857731"	"53.1"	"100.000"	"57.0431"	"17696"	"17696"	"17675"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.7"	""	"68.3"	""	"65.8"	""	"96.4"	""	"110.0"	"103.0"	""	"582"	"50"	"34.000"	"27.000"	"0.000297778260753699"	""	"0"	"7.675E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAATILTSPDLR"	"[R].iAATILTSPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"750.45343"	"1499.89958"	"1499.89946"	"0.08"	"0.00006"	"7/100"	"7"	"100"	"2937318.58630371"	"HCD"	"MS2"	"0"	"127.0"	"100.000"	"57.0386"	"17694"	"17694"	"17675"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.9"	""	"170.0"	""	"187.8"	""	"195.9"	"0.6"	"226.7"	"242.8"	""	"578"	"56"	"34.000"	"27.000"	"7.65416540057336E-05"	""	"0"	"9.569E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAATILTSPDLR"	"[R].iAATILTSPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"3"	"3"	"0.7551"	"0.0000"	"1"	"1"	"1"	"500.63818"	"1499.90000"	"1499.89946"	"0.36"	"0.00018"	"14/100"	"14"	"100"	"9763520.90136719"	"HCD"	"MS2"	"12.58796"	"91.7"	"100.000"	"56.9796"	"17724"	"17724"	"17701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.8"	""	"137.2"	""	"134.2"	""	"145.8"	"3.5"	"152.1"	"167.3"	""	"570"	"49"	"34.000"	"27.000"	"0.000380929722215736"	"27"	"0"	"0.0001734"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAATILTSPDLR"	"[R].iAATILTSPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"500.63821"	"1499.90009"	"1499.89946"	"0.42"	"0.00021"	"14/100"	"14"	"100"	"2408905.65270996"	"HCD"	"MS2"	"3.066643"	"47.5"	"100.000"	"57.2952"	"17853"	"17853"	"17829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.7"	""	"59.0"	""	"64.6"	""	"80.3"	"1.6"	"85.6"	"102.8"	""	"571"	"56"	"34.000"	"27.000"	"8.04648326876002E-05"	""	"0"	"0.0001269"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPISTMIK"	"[R].vHPISTmIk.[G]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"500.63837"	"1499.90055"	"1499.90199"	"-0.96"	"-0.00048"	"11/66"	"11"	"66"	"53404303.9943848"	"HCD"	"MS2"	"18.28707"	"400.4"	"25.510"	"31.5897"	"7340"	"7340"	"7318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"497.1"	""	"456.6"	""	"496.3"	""	"864.3"	"1.2"	"730.0"	"750.3"	""	"569"	"29"	"34.000"	"27.000"	"0.0384664644228772"	"17"	"0.0001889"	"0.0006127"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPISTMIK"	"[R].vHPISTmIk.[G]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"500.63916"	"1499.90293"	"1499.90199"	"0.62"	"0.00031"	"7/66"	"7"	"66"	"48563817.8516846"	"HCD"	"MS2"	"17.20979"	"426.3"	"29.572"	"31.7317"	"7440"	"7440"	"7418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"534.7"	""	"478.2"	""	"521.4"	""	"934.5"	""	"782.9"	"796.0"	""	"601"	"32"	"34.000"	"27.000"	"0.0197171652524023"	"17"	"0.0001889"	"0.0005922"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDALLSAQPK"	"[K].vDALLSAQPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"500.64459"	"1499.91922"	"1499.91975"	"-0.35"	"-0.00018"	"7/84"	"7"	"84"	"5546719.70220947"	"HCD"	"MS2"	"37.91692"	"152.5"	"100.000"	"48.6280"	"14334"	"14334"	"14303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.8"	""	"203.1"	""	"221.2"	""	"272.1"	""	"259.1"	"276.0"	""	"469"	"43"	"33.000"	"26.000"	"0.00123067349428572"	"24"	"0"	"0.0001177"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDALLSAQPK"	"[K].vDALLSAQPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"500.64471"	"1499.91959"	"1499.91975"	"-0.11"	"-0.00005"	"7/84"	"7"	"84"	"5602042.27728271"	"HCD"	"MS2"	"9.358493"	"167.2"	"100.000"	"48.3923"	"14190"	"14190"	"14160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.4"	""	"233.9"	""	"230.7"	""	"273.9"	""	"316.4"	"294.1"	""	"449"	"29"	"33.000"	"26.000"	"0.027619533904738"	"21"	"7.476E-05"	"0.000204"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDALLSAQPK"	"[K].vDALLSAQPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"750.46381"	"1499.92034"	"1499.91975"	"0.39"	"0.00029"	"14/84"	"14"	"84"	"2203933.40203857"	"HCD"	"MS2"	"32.52824"	"164.1"	"100.000"	"48.4315"	"14206"	"14206"	"14176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.9"	""	"224.8"	""	"230.5"	""	"270.6"	""	"303.6"	"290.9"	""	"452"	"48"	"33.000"	"26.000"	"0.000369920533842685"	"20"	"0"	"7.153E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDALLSAQPK"	"[K].vDALLSAQPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"750.46521"	"1499.92314"	"1499.91975"	"2.26"	"0.00170"	"13/84"	"13"	"84"	"2086371.31213379"	"HCD"	"MS2"	"18.65236"	"160.3"	"100.000"	"48.6603"	"14347"	"14347"	"14319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"233.2"	""	"230.2"	""	"238.6"	""	"267.1"	"1.3"	"282.3"	"264.2"	""	"443"	"45"	"33.000"	"26.000"	"0.000740242013657844"	"19"	"0"	"0.000121"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKLPTLK"	"[K].lkLPTLk.[M]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.68719"	"1500.04703"	"1500.04920"	"-1.44"	"-0.00072"	"4/58"	"4"	"58"	"12858136.1389771"	"HCD"	"MS2"	"21.90148"	"761.2"	"100.000"	"45.2322"	"12950"	"12950"	"12923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"898.3"	""	"794.0"	""	"924.7"	""	"1549.6"	""	"1510.3"	"1555.9"	""	"36"	"5"	"22.000"	"15.000"	"0.614147240919472"	"13"	"0.008648"	"0.3745"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKLPTLK"	"[K].lkLPTLk.[M]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.68793"	"1500.04923"	"1500.04920"	"0.02"	"0.00001"	"5/58"	"5"	"58"	"9916807.06799316"	"HCD"	"MS2"	"13.55189"	"578.0"	"100.000"	"44.9358"	"12780"	"12780"	"12752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"682.0"	""	"613.3"	""	"690.4"	""	"1177.4"	""	"1142.7"	"1181.6"	""	"36"	"6"	"22.000"	"15.000"	"0.431789925423508"	"13"	"0.002265"	"0.0332"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESFIQEHLR"	"[K].lESFIQEHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA6"	"CD151 antigen OS=Rattus norvegicus OX=10116 GN=Cd151 PE=1 SV=2"	"Q9QZA6"	"CD151 antigen OS=Rattus norvegicus OX=10116 GN=Cd151 PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"500.95001"	"1500.83548"	"1500.83719"	"-1.14"	"-0.00057"	"9/90"	"9"	"90"	"5848880.28192139"	"HCD"	"MS2"	"8.261744"	"75.1"	"100.000"	"52.3237"	"15788"	"15788"	"15762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.6"	""	"89.5"	""	"99.3"	""	"134.7"	""	"142.4"	"157.4"	""	"828"	"74"	"36.000"	"29.000"	"1.7538818794451E-06"	""	"0"	"0.000122"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESFIQEHLR"	"[K].lESFIQEHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA6"	"CD151 antigen OS=Rattus norvegicus OX=10116 GN=Cd151 PE=1 SV=2"	"Q9QZA6"	"CD151 antigen OS=Rattus norvegicus OX=10116 GN=Cd151 PE=1 SV=2"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"500.95047"	"1500.83686"	"1500.83719"	"-0.22"	"-0.00011"	"9/90"	"9"	"90"	"6216923.99536133"	"HCD"	"MS2"	"21.33493"	"78.1"	"100.000"	"52.4898"	"15906"	"15906"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.5"	""	"91.5"	""	"100.2"	""	"138.3"	"1.9"	"157.5"	"167.5"	""	"809"	"72"	"36.000"	"29.000"	"2.81785424957806E-06"	""	"0"	"5.925E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISYLISGYQR"	"[K].aISYLISGYqR.[Q]"	"N-Term(TMT6plex); Q10(Deamidated)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.95218"	"1500.84198"	"1500.82596"	"10.68"	"0.00534"	"8/90"	"8"	"90"	"5843608.60180664"	"HCD"	"MS2"	"29.86397"	"59.9"	"100.000"	"53.7617"	"16413"	"16413"	"16401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.9"	""	"95.7"	""	"79.3"	""	"106.2"	""	"109.1"	"109.4"	""	"835"	"14"	"36.000"	"29.000"	"1.70081265983217"	"13"	"0.008183"	"0.3459"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNTFGEALK"	"[K].yNTFGEALk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"750.92517"	"1500.84307"	"1500.84625"	"-2.12"	"-0.00159"	"16/84"	"16"	"84"	"2918526.48138428"	"HCD"	"MS2"	"0"	"273.5"	"100.000"	"43.2246"	"12083"	"12083"	"12064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"579.9"	""	"87.3"	""	"111.2"	""	"127.6"	""	"118.0"	"1580.2"	""	"822"	"54"	"36.000"	"29.000"	"0.000159162892062785"	"26"	"0"	"0.0001221"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNTFGEALK"	"[K].yNTFGEALk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"750.92535"	"1500.84343"	"1500.84625"	"-1.88"	"-0.00141"	"7/84"	"7"	"84"	"2403476.3225708"	"HCD"	"MS2"	"100"	"221.4"	"100.000"	"43.4064"	"12206"	"12206"	"12192"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"444.4"	""	"125.2"	""	"117.9"	""	"124.2"	""	"124.4"	"1187.3"	""	"815"	"33"	"36.000"	"29.000"	"0.0213859040051783"	"19"	"7.476E-05"	"0.0001872"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTANLFPHK"	"[R].dTANLFPHk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"500.95645"	"1500.85480"	"1500.85748"	"-1.79"	"-0.00089"	"6/76"	"6"	"76"	"21258912.3240967"	"HCD"	"MS2"	"9.395885"	"284.0"	"50.861"	"37.2733"	"9701"	"9701"	"9686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"391.4"	""	"390.6"	""	"315.2"	""	"522.0"	"9.4"	"548.8"	"515.2"	""	"819"	"39"	"36.000"	"29.000"	"0.00527538191418338"	"22"	"0.0001889"	"0.0005694"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTANLFPHK"	"[R].dTANLFPHk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"500.95648"	"1500.85489"	"1500.85748"	"-1.73"	"-0.00086"	"6/76"	"6"	"76"	"21342314.3934326"	"HCD"	"MS2"	"19.23689"	"245.2"	"41.376"	"37.1315"	"9600"	"9600"	"9578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.4"	""	"330.6"	""	"273.8"	""	"431.3"	"12.0"	"476.7"	"447.0"	""	"821"	"37"	"36.000"	"29.000"	"0.00834282552989318"	"21"	"0.0001889"	"0.0003861"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVNIPSFIVR"	"[K].qVVNIPSFIVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"750.95776"	"1500.90825"	"1500.90996"	"-1.14"	"-0.00086"	"7/100"	"7"	"100"	"2749010.83087158"	"HCD"	"MS2"	"1.947951"	"125.0"	"100.000"	"61.4476"	"19544"	"19544"	"19523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.0"	""	"166.5"	""	"176.2"	""	"207.2"	""	"241.6"	"231.1"	""	"592"	"42"	"34.000"	"27.000"	"0.0017794742629505"	"26"	"0"	"6.112E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVNIPSFIVR"	"[K].qVVNIPSFIVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"500.97430"	"1500.90836"	"1500.90996"	"-1.07"	"-0.00054"	"10/100"	"10"	"100"	"3640099.36297607"	"HCD"	"MS2"	"6.797573"	"54.2"	"100.000"	"61.3392"	"19500"	"19500"	"19475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.1"	""	"75.7"	""	"69.0"	""	"96.7"	"0.8"	"89.9"	"111.8"	""	"592"	"39"	"34.000"	"27.000"	"0.00364159556160465"	""	"0"	"9.183E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVNIPSFIVR"	"[K].qVVNIPSFIVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"750.95844"	"1500.90959"	"1500.90996"	"-0.25"	"-0.00019"	"10/100"	"10"	"100"	"3299275.37805176"	"HCD"	"MS2"	"100"	"156.9"	"100.000"	"61.1433"	"19420"	"19420"	"19395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.4"	""	"217.7"	""	"229.8"	""	"259.6"	""	"297.8"	"275.7"	""	"577"	"30"	"34.000"	"27.000"	"0.0303491000598"	"21"	"0.0001889"	"0.0004814"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVNIPSFIVR"	"[K].qVVNIPSFIVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"750.95862"	"1500.90996"	"1500.90996"	"0.00"	"0.00000"	"9/100"	"9"	"100"	"3122810.34387207"	"HCD"	"MS2"	"3.228455"	"147.5"	"100.000"	"61.2679"	"19418"	"19418"	"19401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"188.8"	""	"180.8"	""	"201.6"	""	"243.0"	"5.9"	"304.7"	"274.4"	""	"576"	"40"	"34.000"	"27.000"	"0.00269396834154495"	""	"0"	"4.779E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVNIPSFIVR"	"[K].qVVNIPSFIVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"500.97495"	"1500.91028"	"1500.90996"	"0.21"	"0.00011"	"8/100"	"8"	"100"	"3712732.34893799"	"HCD"	"MS2"	"9.601773"	"58.3"	"100.000"	"61.1733"	"19379"	"19379"	"19353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.0"	""	"74.1"	""	"89.2"	""	"100.9"	"0.6"	"107.7"	"109.0"	""	"590"	"34"	"34.000"	"27.000"	"0.0125551531874454"	"24"	"0"	"0.0001037"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVNIPSFIVR"	"[K].qVVNIPSFIVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"750.95929"	"1500.91130"	"1500.90996"	"0.89"	"0.00067"	"6/100"	"6"	"100"	"2954859.77819824"	"HCD"	"MS2"	"100"	"162.8"	"100.000"	"60.9799"	"19300"	"19300"	"19273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.7"	""	"225.4"	""	"239.1"	""	"271.5"	""	"309.3"	"302.2"	""	"579"	"21"	"34.000"	"27.000"	"0.255651631171174"	"18"	"0.0001889"	"0.0004823"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNVPAISNK"	"[K].iSNVPAISNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"750.96082"	"1500.91435"	"1500.91500"	"-0.43"	"-0.00032"	"9/98"	"9"	"98"	"5099562.67718506"	"HCD"	"MS2"	"12.90121"	"370.4"	"100.000"	"39.4597"	"10599"	"10599"	"10574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"461.1"	""	"401.2"	""	"257.8"	""	"659.3"	""	"946.4"	"805.9"	""	"541"	"48"	"34.000"	"27.000"	"0.000403800887791118"	"18"	"0"	"8.924E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNVPAISNK"	"[K].iSNVPAISNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"750.96118"	"1500.91509"	"1500.91500"	"0.06"	"0.00004"	"9/98"	"9"	"98"	"5183692.11242676"	"HCD"	"MS2"	"14.72566"	"382.2"	"100.000"	"39.3549"	"10513"	"10513"	"10486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"474.1"	""	"388.9"	""	"262.2"	""	"679.5"	""	"960.9"	"883.9"	""	"525"	"49"	"34.000"	"27.000"	"0.000300005562882315"	"18"	"0"	"0.0001727"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNELLEAIK"	"[K].lNELLEAIk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q1AAU6"	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Asap1 PE=1 SV=2"	"Q1AAU6"	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Asap1 PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"750.97363"	"1500.93999"	"1500.94015"	"-0.11"	"-0.00008"	"6/84"	"6"	"84"	"413061.709228516"	"HCD"	"MS2"	"24.66097"	"35.4"	"100.000"	"75.9924"	"25469"	"25469"	"25439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.8"	""	"46.5"	""	"41.3"	""	"63.6"	"0.6"	"65.8"	"70.2"	""	"346"	"42"	"32.000"	"25.000"	"0.00109407250288086"	""	"7.476E-05"	"0.0001909"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINLTDILK"	"[K].lINLTDILk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"A0A0G2K344"	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Pik3ca PE=1 SV=1"	"A0A0G2K344"	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Pik3ca PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"750.99084"	"1500.97441"	"1500.97654"	"-1.41"	"-0.00106"	"8/78"	"8"	"78"	"379682.526550293"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"78.6587"	"26549"	"26549"	"26527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.8"	""	"38.1"	""	"48.8"	""	"56.8"	"0.6"	"55.2"	"65.6"	""	"228"	"50"	"30.000"	"23.000"	"0.000102542724294424"	""	"0"	"3.847E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIVATIAVK"	"[R].dLIVATIAVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"750.99170"	"1500.97612"	"1500.97654"	"-0.28"	"-0.00021"	"9/82"	"9"	"82"	"1605440.39447021"	"HCD"	"MS2"	"12.24934"	"113.3"	"100.000"	"60.8692"	"19255"	"19255"	"19225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.1"	""	"166.2"	""	"176.2"	""	"178.8"	"0.7"	"190.6"	"213.7"	""	"228"	"55"	"30.000"	"23.000"	"3.61330690786958E-05"	""	"0"	"4.149E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIVATIAVK"	"[R].dLIVATIAVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"500.99695"	"1500.97629"	"1500.97654"	"-0.16"	"-0.00008"	"8/82"	"8"	"82"	"3018481.3302002"	"HCD"	"MS2"	"12.87869"	"75.9"	"100.000"	"61.0350"	"19376"	"19376"	"19347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.7"	""	"107.0"	""	"103.0"	""	"132.7"	"4.4"	"132.6"	"130.3"	""	"228"	"28"	"30.000"	"23.000"	"0.0195841556135965"	"18"	"0.0001889"	"0.0004061"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINLTDILK"	"[K].lINLTDILk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"A0A0G2K344"	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Pik3ca PE=1 SV=1"	"A0A0G2K344"	"Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Pik3ca PE=1 SV=1"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"750.99182"	"1500.97637"	"1500.97654"	"-0.11"	"-0.00009"	"8/78"	"8"	"78"	"392171.308959961"	"HCD"	"MS2"	"14.21082"	"33.4"	"100.000"	"78.6824"	"26508"	"26508"	"26481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.0"	""	"47.8"	""	"48.9"	""	"56.9"	"1.4"	"58.2"	"57.6"	""	"222"	"54"	"30.000"	"23.000"	"4.62725015652073E-05"	""	"0"	"1.69E-05"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIVATIAVK"	"[R].dLIVATIAVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"750.99219"	"1500.97710"	"1500.97654"	"0.37"	"0.00028"	"12/82"	"12"	"82"	"1528425.06774902"	"HCD"	"MS2"	"47.27531"	"113.5"	"100.000"	"61.0304"	"19374"	"19374"	"19347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.8"	""	"181.0"	""	"165.7"	""	"169.4"	""	"206.4"	"208.8"	""	"217"	"26"	"30.000"	"23.000"	"0.0299522697399908"	"16"	"0.0001889"	"0.0004938"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIVATIAVK"	"[R].dLIVATIAVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"500.99734"	"1500.97748"	"1500.97654"	"0.63"	"0.00032"	"9/82"	"9"	"82"	"3441219.28216553"	"HCD"	"MS2"	"9.62289"	"81.2"	"100.000"	"60.9084"	"19271"	"19271"	"19241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.5"	""	"112.5"	""	"122.9"	""	"135.9"	""	"145.8"	"140.9"	""	"217"	"20"	"30.000"	"23.000"	"0.110517165603872"	"20"	"0.0001889"	"0.0008065"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSPLLIGSTK"	"[R].qSPLLIGSTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"501.31567"	"1501.93247"	"1501.93540"	"-1.95"	"-0.00098"	"10/104"	"10"	"104"	"10413731.4865112"	"HCD"	"MS2"	"16.84338"	"455.3"	"100.000"	"41.2425"	"11284"	"11284"	"11253"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"588.4"	""	"515.0"	""	"541.6"	""	"858.8"	"0.2"	"873.7"	"942.6"	""	"501"	"36"	"33.000"	"26.000"	"0.00563388178761864"	"15"	"0.0001859"	"0.00034"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSPLLIGSTK"	"[R].qSPLLIGSTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"501.31613"	"1501.93384"	"1501.93540"	"-1.04"	"-0.00052"	"10/104"	"10"	"104"	"12607025.7059326"	"HCD"	"MS2"	"23.46734"	"496.7"	"72.472"	"41.4648"	"11419"	"11419"	"11389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"641.6"	""	"562.2"	""	"540.8"	""	"935.2"	""	"991.7"	"1050.7"	""	"500"	"22"	"33.000"	"26.000"	"0.170584673535417"	"14"	"0.000494"	"0.002737"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSPLLIGSTK"	"[R].qSPLLIGSTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"751.47058"	"1501.93389"	"1501.93540"	"-1.01"	"-0.00076"	"8/104"	"8"	"104"	"6648032.03656006"	"HCD"	"MS2"	"0"	"430.6"	"100.000"	"41.4007"	"11392"	"11392"	"11373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"692.5"	""	"446.5"	""	"565.2"	""	"767.4"	"3.5"	"694.2"	"908.1"	""	"496"	"57"	"33.000"	"26.000"	"4.44070251800753E-05"	"25"	"0"	"7.126E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLQVDLTK"	"[R].nLLQVDLTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"3"	"3"	"0.7660"	"0.0000"	"1"	"1"	"1"	"501.31622"	"1501.93412"	"1501.93540"	"-0.85"	"-0.00043"	"11/84"	"11"	"84"	"8659536.71075439"	"HCD"	"MS2"	"4.943985"	"254.9"	"100.000"	"54.5162"	"16663"	"16663"	"16640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.6"	""	"346.4"	""	"335.9"	""	"459.8"	"1.0"	"439.8"	"470.3"	""	"494"	"47"	"33.000"	"26.000"	"0.000487188415820369"	"26"	"0.0001308"	"0.0002324"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLQVDLTK"	"[R].nLLQVDLTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"751.47070"	"1501.93413"	"1501.93540"	"-0.85"	"-0.00064"	"8/84"	"8"	"84"	"2326049.70227051"	"HCD"	"MS2"	"6.881932"	"179.8"	"100.000"	"54.8131"	"16784"	"16784"	"16764"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.4"	""	"237.3"	""	"243.2"	""	"288.6"	"0.3"	"334.4"	"344.3"	""	"494"	"59"	"33.000"	"26.000"	"2.92884880797289E-05"	""	"0"	"7.603E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSPLLIGSTK"	"[R].qSPLLIGSTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"751.47070"	"1501.93413"	"1501.93540"	"-0.85"	"-0.00064"	"9/104"	"9"	"104"	"6113999.54278564"	"HCD"	"MS2"	"4.303429"	"414.5"	"100.000"	"41.2242"	"11276"	"11276"	"11253"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"633.3"	""	"438.3"	""	"575.4"	""	"723.3"	"1.7"	"677.0"	"877.0"	""	"494"	"54"	"33.000"	"26.000"	"0.000108566779013143"	"24"	"0"	"9.228E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLIGDSGVGK"	"[K].vVLIGDSGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.8451"	"0.0000"	"1"	"1"	"1"	"751.47089"	"1501.93450"	"1501.93540"	"-0.60"	"-0.00045"	"17/82"	"17"	"82"	"7582037.89959717"	"HCD"	"MS2"	"12.88477"	"458.5"	"100.000"	"47.3822"	"13776"	"13776"	"13752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"578.6"	""	"690.1"	""	"644.7"	""	"779.1"	""	"804.7"	"846.3"	""	"494"	"71"	"33.000"	"26.000"	"1.85650854822497E-06"	""	"0"	"1.174E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLIGDSGVGK"	"[K].vVLIGDSGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"501.31650"	"1501.93494"	"1501.93540"	"-0.31"	"-0.00015"	"8/82"	"8"	"82"	"12531047.161438"	"HCD"	"MS2"	"13.05116"	"289.2"	"82.768"	"47.4123"	"13788"	"13788"	"13768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"342.9"	""	"423.3"	""	"405.3"	""	"486.2"	""	"548.2"	"537.1"	""	"494"	"50"	"33.000"	"26.000"	"0.000248140100198764"	"16"	"0"	"5.034E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLQVDLTK"	"[R].nLLQVDLTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"3"	"3"	"0.7660"	"0.0000"	"1"	"1"	"1"	"501.31653"	"1501.93503"	"1501.93540"	"-0.25"	"-0.00012"	"7/84"	"7"	"84"	"9546319.08685303"	"HCD"	"MS2"	"6.141697"	"271.8"	"100.000"	"54.7134"	"16797"	"16797"	"16773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"374.5"	""	"365.6"	""	"364.7"	""	"472.6"	""	"504.9"	"496.2"	""	"494"	"47"	"33.000"	"26.000"	"0.000443299205827634"	"26"	"0"	"0.0001793"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLQVDLTK"	"[R].nLLQVDLTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"751.47119"	"1501.93511"	"1501.93540"	"-0.20"	"-0.00015"	"14/84"	"14"	"84"	"2252010.60028076"	"HCD"	"MS2"	"5.560181"	"163.1"	"100.000"	"55.0189"	"16922"	"16922"	"16901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.2"	""	"227.4"	""	"218.2"	""	"265.5"	""	"304.6"	"301.8"	""	"494"	"47"	"33.000"	"26.000"	"0.00051843815125501"	"23"	"0.0001308"	"0.0002327"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLQVDLTK"	"[R].nLLQVDLTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"751.47125"	"1501.93523"	"1501.93540"	"-0.11"	"-0.00009"	"8/84"	"8"	"84"	"8564021.97259521"	"HCD"	"MS2"	"2.283417"	"595.6"	"100.000"	"54.5068"	"16659"	"16659"	"16640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"853.9"	""	"782.7"	""	"814.5"	""	"1046.1"	"5.1"	"1055.0"	"1083.0"	""	"481"	"60"	"33.000"	"26.000"	"2.3287082443083E-05"	"26"	"0"	"0.0001581"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLIGDSGVGK"	"[K].vVLIGDSGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"751.47131"	"1501.93535"	"1501.93540"	"-0.03"	"-0.00002"	"18/82"	"18"	"82"	"7277642.42370605"	"HCD"	"MS2"	"25.80213"	"450.3"	"100.000"	"47.6478"	"13933"	"13933"	"13906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"576.4"	""	"688.7"	""	"629.4"	""	"746.4"	"2.8"	"808.8"	"813.6"	""	"482"	"78"	"33.000"	"26.000"	"4.22685200943864E-07"	""	"0"	"1.128E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLQVDLTK"	"[R].nLLQVDLTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"751.47131"	"1501.93535"	"1501.93540"	"-0.03"	"-0.00002"	"8/84"	"8"	"84"	"9035595.43188477"	"HCD"	"MS2"	"6.292707"	"598.5"	"100.000"	"54.6995"	"16791"	"16791"	"16773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"861.8"	""	"773.5"	""	"805.2"	""	"1061.6"	"6.2"	"1086.4"	"1074.8"	""	"482"	"60"	"33.000"	"26.000"	"2.28043155889156E-05"	"26"	"0"	"0.0001747"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLIGDSGVGK"	"[K].vVLIGDSGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"501.31671"	"1501.93558"	"1501.93540"	"0.12"	"0.00006"	"13/82"	"13"	"82"	"11555983.6737671"	"HCD"	"MS2"	"49.93216"	"331.9"	"100.000"	"47.6732"	"13943"	"13943"	"13922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"418.2"	""	"503.6"	""	"460.2"	""	"562.3"	"2.1"	"581.4"	"615.8"	""	"481"	"52"	"33.000"	"26.000"	"0.00016753867664364"	"19"	"0"	"0.0001514"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLESMIPIK"	"[R].lLESMIPIk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6TUD4"	"Protein YIPF3 OS=Rattus norvegicus OX=10116 GN=Yipf3 PE=2 SV=1"	"Q6TUD4"	"Protein YIPF3 OS=Rattus norvegicus OX=10116 GN=Yipf3 PE=2 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"501.31824"	"1501.94016"	"1501.94279"	"-1.75"	"-0.00088"	"8/66"	"8"	"66"	"1907897.22644043"	"HCD"	"MS2"	"47.45362"	"55.4"	"100.000"	"70.1664"	"23095"	"23095"	"23066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.4"	""	"60.8"	""	"64.3"	""	"107.6"	""	"118.7"	"116.9"	""	"492"	"19"	"33.000"	"26.000"	"0.284403611579257"	"18"	"0.001217"	"0.01729"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLESMIPIK"	"[R].lLESMIPIk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6TUD4"	"Protein YIPF3 OS=Rattus norvegicus OX=10116 GN=Yipf3 PE=2 SV=1"	"Q6TUD4"	"Protein YIPF3 OS=Rattus norvegicus OX=10116 GN=Yipf3 PE=2 SV=1"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"501.31848"	"1501.94089"	"1501.94279"	"-1.27"	"-0.00063"	"9/66"	"9"	"66"	"1687197.13800049"	"HCD"	"MS2"	"14.06323"	"53.8"	"100.000"	"70.2649"	"23083"	"23083"	"23059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.1"	""	"66.5"	""	"76.0"	""	"91.3"	""	"103.8"	"103.7"	""	"431"	"32"	"33.000"	"26.000"	"0.0149777740440386"	""	"0.0003571"	"0.001497"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLISEDLK"	"[K].iLLISEDLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"751.48285"	"1501.95842"	"1501.96055"	"-1.42"	"-0.00107"	"8/68"	"8"	"68"	"3992496.20495605"	"HCD"	"MS2"	"17.87489"	"263.7"	"100.000"	"66.7363"	"21703"	"21703"	"21683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"405.8"	""	"379.7"	""	"418.1"	""	"420.4"	"1.3"	"410.1"	"457.5"	""	"350"	"53"	"32.000"	"25.000"	"9.14193330748459E-05"	""	"0"	"0.0001447"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLISEDLK"	"[K].iLLISEDLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"751.48389"	"1501.96050"	"1501.96055"	"-0.04"	"-0.00003"	"14/68"	"14"	"68"	"4634571.33300781"	"HCD"	"MS2"	"17.01154"	"316.2"	"100.000"	"66.8379"	"21692"	"21692"	"21673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"461.1"	""	"454.4"	""	"487.5"	""	"519.8"	"1.8"	"527.5"	"539.3"	""	"341"	"44"	"32.000"	"25.000"	"0.000742547744633895"	""	"0.0001308"	"0.0002616"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGYFDEFGIIR"	"[R].gGYFDEFGIIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"751.89288"	"1502.77849"	"1502.78410"	"-3.73"	"-0.00280"	"10/82"	"10"	"82"	"868888.084289551"	"HCD"	"MS2"	"35.31537"	"75.0"	"100.000"	"63.0605"	"20150"	"20150"	"20121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.1"	""	"103.0"	""	"91.7"	""	"150.0"	"1.7"	"137.2"	"134.3"	""	"744"	"41"	"35.000"	"28.000"	"0.0032926300685707"	"15"	"0"	"7.946E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDGFFSTIR"	"[K].fALDGFFSTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"751.91296"	"1502.81865"	"1502.82048"	"-1.22"	"-0.00091"	"9/90"	"9"	"90"	"888257.31652832"	"HCD"	"MS2"	"0"	"54.9"	"100.000"	"79.1938"	"26768"	"26768"	"26751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.7"	""	"83.3"	""	"78.2"	""	"93.6"	"2.2"	"101.6"	"105.4"	""	"916"	"55"	"36.000"	"29.000"	"0.000134544354059838"	"22"	"0"	"9.804E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDGFFSTIR"	"[K].fALDGFFSTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"751.91327"	"1502.81926"	"1502.82048"	"-0.81"	"-0.00061"	"9/90"	"9"	"90"	"1454808.77178955"	"HCD"	"MS2"	"11.75933"	"87.3"	"100.000"	"78.8916"	"26644"	"26644"	"26623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.9"	""	"139.4"	""	"120.1"	""	"158.5"	"0.3"	"158.2"	"167.8"	""	"958"	"54"	"36.000"	"29.000"	"0.000209091083643039"	"20"	"0"	"8.58E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDGFFSTIR"	"[K].fALDGFFSTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9636"	"0.0000"	"1"	"1"	"1"	"751.91333"	"1502.81938"	"1502.82048"	"-0.73"	"-0.00055"	"8/90"	"8"	"90"	"1613809.99053955"	"HCD"	"MS2"	"15.10392"	"91.8"	"100.000"	"78.9409"	"26613"	"26613"	"26593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.8"	""	"138.3"	""	"140.6"	""	"164.2"	"2.7"	"162.7"	"175.3"	""	"958"	"55"	"36.000"	"29.000"	"0.000156075779779962"	"18"	"0"	"4.063E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDGFFSTIR"	"[K].fALDGFFSTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"751.91339"	"1502.81951"	"1502.82048"	"-0.65"	"-0.00049"	"11/90"	"11"	"90"	"669552.394714355"	"HCD"	"MS2"	"5.839581"	"45.3"	"100.000"	"79.2521"	"26740"	"26740"	"26721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.7"	""	"60.8"	""	"70.3"	""	"80.7"	"2.2"	"76.5"	"93.1"	""	"958"	"34"	"36.000"	"29.000"	"0.0182530529405617"	"15"	"0"	"0.0001304"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYTPMEYK"	"[K].iYTPMEYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"751.92047"	"1502.83367"	"1502.83291"	"0.50"	"0.00038"	"4/62"	"4"	"62"	"2216234.06542969"	"HCD"	"MS2"	"54.90126"	"194.0"	"100.000"	"45.8006"	"13129"	"13129"	"13103"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.6"	""	"269.7"	""	"308.8"	""	"252.7"	""	"323.7"	"345.9"	""	"986"	"14"	"36.000"	"29.000"	"1.94467449923113"	"13"	"0.00103"	"0.01308"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYTPMEYK"	"[K].iYTPMEYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"751.92078"	"1502.83428"	"1502.83291"	"0.91"	"0.00068"	"7/62"	"7"	"62"	"1627798.46398926"	"HCD"	"MS2"	"39.81188"	"146.2"	"100.000"	"46.2046"	"13343"	"13343"	"13312"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"262.9"	"3.0"	"196.6"	""	"227.6"	""	"171.8"	"3.3"	"253.5"	"264.2"	""	"995"	"24"	"36.000"	"29.000"	"0.202671688207546"	"18"	"0.0006037"	"0.005703"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDVLPLAFTR"	"[K].lEDVLPLAFTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"751.94141"	"1502.87554"	"1502.87800"	"-1.64"	"-0.00123"	"8/96"	"8"	"96"	"657099.417907715"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"76.4930"	"25620"	"25620"	"25601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.2"	""	"57.6"	""	"61.5"	""	"74.5"	"0.5"	"73.4"	"67.9"	""	"881"	"35"	"36.000"	"29.000"	"0.0138339407965247"	"29"	"7.476E-05"	"0.0001842"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDVLPLAFTR"	"[K].lEDVLPLAFTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"501.63013"	"1502.87583"	"1502.87800"	"-1.44"	"-0.00072"	"12/96"	"12"	"96"	"1028586.05969238"	"HCD"	"MS2"	"39.07227"	"28.5"	"100.000"	"76.2299"	"25565"	"25565"	"25535"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.8"	""	"33.5"	""	"32.8"	""	"58.8"	"0.8"	"60.4"	"53.9"	""	"877"	"24"	"36.000"	"29.000"	"0.183218615774544"	"20"	"0.0001889"	"0.0003793"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDVLPLAFTR"	"[K].lEDVLPLAFTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.6792"	"0.0000"	"1"	"1"	"1"	"751.94165"	"1502.87602"	"1502.87800"	"-1.31"	"-0.00099"	"8/96"	"8"	"96"	"657989.162841797"	"HCD"	"MS2"	"0"	"39.8"	"100.000"	"76.4417"	"25650"	"25650"	"25631"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.7"	""	"53.6"	""	"58.8"	""	"65.6"	""	"76.2"	"67.7"	""	"877"	"53"	"36.000"	"29.000"	"0.000242085957124612"	""	"0"	"6.031E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDVLPLAFTR"	"[K].lEDVLPLAFTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"751.94171"	"1502.87615"	"1502.87800"	"-1.23"	"-0.00092"	"8/96"	"8"	"96"	"1777727.99005127"	"HCD"	"MS2"	"10.89547"	"88.9"	"100.000"	"76.1248"	"25522"	"25522"	"25503"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.4"	""	"131.3"	""	"143.4"	""	"143.9"	"0.8"	"155.0"	"137.8"	""	"877"	"46"	"36.000"	"29.000"	"0.00115869624008567"	""	"0"	"4.348E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDVLPLAFTR"	"[K].lEDVLPLAFTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"751.94208"	"1502.87688"	"1502.87800"	"-0.74"	"-0.00056"	"9/96"	"9"	"96"	"2262684.74615479"	"HCD"	"MS2"	"0"	"107.3"	"100.000"	"76.1798"	"25493"	"25493"	"25473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.7"	""	"160.8"	""	"161.9"	""	"180.8"	""	"192.2"	"180.5"	""	"865"	"33"	"36.000"	"29.000"	"0.019408238114608"	"28"	"0"	"9.973E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDVLPLAFTR"	"[K].lEDVLPLAFTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"501.63049"	"1502.87693"	"1502.87800"	"-0.71"	"-0.00036"	"11/96"	"11"	"96"	"936641.412658691"	"HCD"	"MS2"	"30.92547"	"32.8"	"100.000"	"76.3192"	"25550"	"25550"	"25521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.3"	""	"36.0"	""	"39.8"	""	"61.8"	""	"69.0"	"68.1"	""	"865"	"20"	"36.000"	"29.000"	"0.4325"	"19"	"0.0001889"	"0.0006511"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSTDPVTAK"	"[R].lLSTDPVTAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8955"	"0.0000"	"1"	"1"	"1"	"751.96216"	"1502.91704"	"1502.91942"	"-1.58"	"-0.00119"	"9/82"	"9"	"82"	"7558947.56195068"	"HCD"	"MS2"	"0"	"486.3"	"100.000"	"44.3968"	"12610"	"12610"	"12588"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"634.6"	""	"581.0"	""	"607.1"	""	"838.4"	"3.9"	"952.9"	"996.5"	""	"746"	"67"	"35.000"	"28.000"	"7.45948477373014E-06"	"24"	"0"	"3.949E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSTDPVTAK"	"[R].lLSTDPVTAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"751.96240"	"1502.91753"	"1502.91942"	"-1.26"	"-0.00094"	"18/82"	"18"	"82"	"7728955.68640137"	"HCD"	"MS2"	"0"	"513.1"	"100.000"	"44.1214"	"12448"	"12448"	"12422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"695.8"	""	"635.5"	""	"603.7"	""	"890.5"	""	"1008.0"	"1035.3"	""	"746"	"72"	"35.000"	"28.000"	"2.14145440403333E-06"	"25"	"0"	"3.808E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITPLDSLSK"	"[K].aITPLDSLSk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q499V8"	"Specifically androgen-regulated gene protein OS=Rattus norvegicus OX=10116 GN=Sarg PE=1 SV=2"	"Q499V8"	"Specifically androgen-regulated gene protein OS=Rattus norvegicus OX=10116 GN=Sarg PE=1 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"751.96320"	"1502.91911"	"1502.91942"	"-0.20"	"-0.00015"	"8/84"	"8"	"84"	"1186094.65008545"	"HCD"	"MS2"	"13.501"	"100.1"	"100.000"	"49.2420"	"14585"	"14585"	"14558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.5"	""	"107.2"	""	"105.1"	""	"230.0"	"0.5"	"225.8"	"187.3"	""	"737"	"49"	"35.000"	"28.000"	"0.000442015493210546"	"26"	"0.0001308"	"0.0002744"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLNLIK"	"[R].sEIDLNLIk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"751.96326"	"1502.91924"	"1502.91942"	"-0.12"	"-0.00009"	"16/76"	"16"	"76"	"4596131.16448975"	"HCD"	"MS2"	"4.691914"	"341.5"	"100.000"	"56.6225"	"17578"	"17578"	"17557"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"456.9"	""	"451.0"	""	"492.1"	""	"568.6"	"3.4"	"574.8"	"688.6"	""	"731"	"56"	"35.000"	"28.000"	"9.45991820488455E-05"	""	"0"	"0.0001424"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLNLIK"	"[R].sEIDLNLIk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"751.96332"	"1502.91936"	"1502.91942"	"-0.04"	"-0.00003"	"16/76"	"16"	"76"	"4437803.04046631"	"HCD"	"MS2"	"4.820167"	"327.7"	"100.000"	"56.4195"	"17441"	"17441"	"17419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"446.6"	""	"439.1"	""	"468.1"	""	"540.7"	""	"565.6"	"648.0"	""	"716"	"54"	"35.000"	"28.000"	"0.000145506711841146"	""	"0"	"0.0001219"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"501.66583"	"1502.98294"	"1502.98733"	"-2.91"	"-0.00146"	"7/70"	"7"	"70"	"24131472.4268799"	"HCD"	"MS2"	"71.67852"	"506.0"	"32.954"	"35.2422"	"8868"	"8868"	"8842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"531.7"	""	"474.6"	""	"553.7"	""	"1017.0"	"9.1"	"1114.9"	"1111.7"	""	"175"	"1"	"29.000"	"22.000"	"6.59186118267002"	"13"	"0.0006037"	"0.004964"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"501.66623"	"1502.98413"	"1502.98733"	"-2.12"	"-0.00106"	"7/70"	"7"	"70"	"22959147.2711182"	"HCD"	"MS2"	"73.52521"	"515.8"	"36.103"	"35.1894"	"8803"	"8803"	"8779"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"516.9"	""	"513.7"	""	"561.9"	""	"1003.8"	"11.8"	"1181.4"	"1118.5"	""	"172"	"3"	"29.000"	"22.000"	"4.60785125461474"	"13"	"0.0006037"	"0.003766"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.8750"	"0.0000"	"1"	"1"	"1"	"376.50150"	"1502.98415"	"1502.98733"	"-2.11"	"-0.00079"	"5/70"	"5"	"70"	"59324876.4108887"	"HCD"	"MS2"	"16.15048"	"615.9"	"17.603"	"33.1585"	"8025"	"8025"	"8006"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"615.4"	""	"569.8"	""	"717.7"	""	"1309.2"	"14.3"	"1344.2"	"1285.8"	""	"171"	"8"	"29.000"	"22.000"	"1.31815388727187"	"14"	"0.005975"	"0.2024"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.8333"	"0.0000"	"1"	"1"	"3"	"376.50156"	"1502.98440"	"1502.98733"	"-1.95"	"-0.00073"	"5/70"	"5"	"70"	"38300086.3737793"	"HCD"	"MS2"	"13.63213"	"812.0"	"35.648"	"33.0791"	"7950"	"7950"	"7928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"773.7"	""	"758.7"	""	"922.0"	""	"1670.2"	""	"1857.3"	"1747.3"	""	"171"	"6"	"29.000"	"22.000"	"1.91851904483427"	"14"	"0.003197"	"0.06612"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"751.99597"	"1502.98467"	"1502.98733"	"-1.77"	"-0.00133"	"6/70"	"6"	"70"	"995031.398803711"	"HCD"	"MS2"	"0"	"79.4"	"100.000"	"34.2445"	"8416"	"8416"	"8389"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.7"	""	"41.1"	""	"71.1"	""	"100.9"	""	"346.1"	"162.7"	""	"171"	"42"	"29.000"	"22.000"	"0.000494272120531889"	""	"0.0001889"	"0.001043"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"751.99609"	"1502.98491"	"1502.98733"	"-1.61"	"-0.00121"	"6/70"	"6"	"70"	"23875008.2944336"	"HCD"	"MS2"	"0"	"415.5"	"24.137"	"33.5800"	"8148"	"8148"	"8135"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"385.8"	""	"370.4"	""	"484.4"	""	"834.0"	"3.6"	"948.4"	"928.0"	""	"171"	"40"	"29.000"	"22.000"	"0.000935332693162641"	""	"0.001846"	"0.02655"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"751.99628"	"1502.98528"	"1502.98733"	"-1.36"	"-0.00102"	"6/70"	"6"	"70"	"128915028.673828"	"HCD"	"MS2"	"0"	"637.6"	"6.764"	"33.3762"	"8111"	"8111"	"8094"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"627.7"	""	"568.6"	""	"697.5"	""	"1279.0"	"1.2"	"1461.6"	"1433.0"	""	"171"	"42"	"29.000"	"22.000"	"0.000508119795616315"	""	"0.007472"	"0.2831"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"751.99634"	"1502.98540"	"1502.98733"	"-1.28"	"-0.00096"	"6/70"	"6"	"70"	"109624209.578125"	"HCD"	"MS2"	"0"	"826.0"	"10.708"	"33.3037"	"8040"	"8040"	"8028"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"808.4"	""	"730.3"	""	"911.7"	""	"1731.3"	"7.5"	"1810.5"	"1859.3"	""	"171"	"40"	"29.000"	"22.000"	"0.000920377757653509"	""	"0.006657"	"0.2482"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"751.99634"	"1502.98540"	"1502.98733"	"-1.28"	"-0.00096"	"6/70"	"6"	"70"	"56202955.6624756"	"HCD"	"MS2"	"0"	"3079.3"	"78.608"	"33.0875"	"7996"	"7996"	"7974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3222.6"	""	"2886.1"	""	"3366.4"	""	"6743.5"	""	"6730.2"	"6563.4"	""	"171"	"42"	"29.000"	"22.000"	"0.000557142276922021"	""	"0.004291"	"0.1119"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.7143"	"0.0000"	"1"	"1"	"3"	"376.50183"	"1502.98549"	"1502.98733"	"-1.22"	"-0.00046"	"5/70"	"5"	"70"	"27933206.1536865"	"HCD"	"MS2"	"14.52775"	"994.3"	"61.193"	"33.4655"	"8146"	"8146"	"8135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"954.7"	""	"950.3"	""	"1162.1"	""	"2019.9"	"25.6"	"2223.8"	"2121.4"	""	"171"	"7"	"29.000"	"22.000"	"1.83217146395765"	"15"	"0.006657"	"0.2423"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"501.66678"	"1502.98578"	"1502.98733"	"-1.03"	"-0.00051"	"7/70"	"7"	"70"	"440759151.575439"	"HCD"	"MS2"	"13.81216"	"3361.3"	"17.774"	"32.9921"	"7914"	"7914"	"7896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3169.3"	""	"3019.5"	""	"3566.3"	""	"7422.1"	""	"7534.8"	"7542.4"	""	"171"	"34"	"29.000"	"22.000"	"0.00323568409933115"	"21"	"0.0004166"	"0.002369"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"501.66678"	"1502.98578"	"1502.98733"	"-1.03"	"-0.00051"	"7/70"	"7"	"70"	"122814555.829163"	"HCD"	"MS2"	"54.41744"	"2567.3"	"81.594"	"33.0486"	"7980"	"7980"	"7958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2172.3"	""	"2127.4"	""	"2667.7"	""	"5614.0"	""	"5981.9"	"6110.1"	""	"171"	"41"	"29.000"	"22.000"	"0.000638213688440607"	""	"0.0003146"	"0.001438"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.3333"	"0.0000"	"1"	"1"	"3"	"376.50192"	"1502.98586"	"1502.98733"	"-0.97"	"-0.00037"	"9/70"	"9"	"70"	"29138446.2999268"	"HCD"	"MS2"	"13.28705"	"986.6"	"56.883"	"33.3562"	"8060"	"8060"	"8047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"961.0"	""	"904.4"	""	"1131.7"	""	"1984.9"	"29.4"	"2220.5"	"2155.7"	""	"147"	"9"	"28.000"	"21.000"	"0.832314266978134"	"19"	"0.003507"	"0.08025"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"751.99658"	"1502.98589"	"1502.98733"	"-0.96"	"-0.00072"	"7/70"	"7"	"70"	"2193435.46893311"	"HCD"	"MS2"	"0"	"170.5"	"100.000"	"33.9533"	"8343"	"8343"	"8330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.5"	""	"174.3"	""	"180.6"	""	"337.3"	""	"402.0"	"373.9"	""	"147"	"37"	"28.000"	"21.000"	"0.00150413680799264"	""	"0.0003146"	"0.001474"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"751.99658"	"1502.98589"	"1502.98733"	"-0.96"	"-0.00072"	"7/70"	"7"	"70"	"2308698.79095459"	"HCD"	"MS2"	"0"	"178.7"	"100.000"	"33.8777"	"8269"	"8269"	"8250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.0"	""	"199.7"	""	"202.9"	""	"326.5"	""	"424.7"	"383.5"	""	"147"	"37"	"28.000"	"21.000"	"0.00148691909632853"	""	"0.000523"	"0.002871"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"751.99658"	"1502.98589"	"1502.98733"	"-0.96"	"-0.00072"	"6/70"	"6"	"70"	"44331803.3637695"	"HCD"	"MS2"	"0"	"3372.2"	"100.000"	"33.0196"	"7926"	"7926"	"7896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3557.6"	""	"3105.7"	""	"3647.9"	""	"7396.6"	""	"7381.8"	"7234.0"	""	"147"	"42"	"28.000"	"21.000"	"0.000516758155114617"	""	"0.001966"	"0.0296"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"3"	"751.99664"	"1502.98601"	"1502.98733"	"-0.88"	"-0.00066"	"5/70"	"5"	"70"	"638504.08215332"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"34.5495"	"8541"	"8541"	"8515"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.8"	""	"56.5"	""	"56.3"	""	"91.0"	""	"172.8"	"121.2"	""	"147"	"28"	"28.000"	"21.000"	"0.0107717766310259"	""	"0.0001889"	"0.0006267"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"751.99677"	"1502.98625"	"1502.98733"	"-0.71"	"-0.00054"	"7/70"	"7"	"70"	"1305050.88232422"	"HCD"	"MS2"	"0"	"104.0"	"100.000"	"34.3109"	"8486"	"8486"	"8461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.9"	""	"43.6"	""	"93.7"	""	"113.2"	""	"513.9"	"206.1"	""	"147"	"38"	"28.000"	"21.000"	"0.00125975862101869"	""	"0.0003839"	"0.001855"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"501.66702"	"1502.98651"	"1502.98733"	"-0.54"	"-0.00027"	"7/70"	"7"	"70"	"4110496292.5"	"HCD"	"MS2"	"6.24612"	"684.3"	"0.272"	"33.3235"	"8090"	"8090"	"8078"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"683.0"	""	"601.4"	""	"752.9"	""	"1436.9"	""	"1556.1"	"1487.8"	""	"147"	"38"	"28.000"	"21.000"	"0.00118928882766765"	""	"0.0006037"	"0.006185"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"751.99719"	"1502.98711"	"1502.98733"	"-0.14"	"-0.00011"	"6/70"	"6"	"70"	"557720.296325684"	"HCD"	"MS2"	"0"	"50.4"	"100.000"	"34.6275"	"8616"	"8616"	"8586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.3"	""	"45.4"	""	"61.6"	""	"96.4"	""	"132.9"	"106.2"	""	"147"	"20"	"28.000"	"21.000"	"0.0664182363185891"	"18"	"0.0003839"	"0.001542"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"751.99719"	"1502.98711"	"1502.98733"	"-0.14"	"-0.00011"	"6/70"	"6"	"70"	"13141888.3670044"	"HCD"	"MS2"	"0"	"880.8"	"100.000"	"33.6580"	"8223"	"8223"	"8210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"834.2"	""	"831.3"	""	"1018.3"	""	"1739.1"	"4.5"	"2009.7"	"1945.1"	""	"147"	"43"	"28.000"	"21.000"	"0.000398370654445194"	""	"0.001422"	"0.01962"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"501.66724"	"1502.98716"	"1502.98733"	"-0.11"	"-0.00006"	"7/70"	"7"	"70"	"3996920940.29688"	"HCD"	"MS2"	"5.871003"	"740.9"	"0.308"	"33.2762"	"8029"	"8029"	"8019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"711.0"	""	"644.7"	""	"833.2"	""	"1570.2"	""	"1693.9"	"1607.0"	""	"144"	"34"	"28.000"	"21.000"	"0.00256644816066896"	"21"	"0.0007076"	"0.006895"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKLPSGSK"	"[R].vkLPSGSk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"501.66730"	"1502.98734"	"1502.98733"	"0.01"	"0.00000"	"6/72"	"6"	"72"	"22060091.3856812"	"HCD"	"MS2"	"42.11396"	"1434.0"	"100.000"	"31.5873"	"7381"	"7381"	"7357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2440.3"	""	"2248.4"	""	"2393.9"	""	"2110.6"	"12.4"	"2182.5"	"2151.2"	""	"144"	"6"	"28.000"	"21.000"	"1.73114121600499"	"13"	"0.003571"	"0.08268"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"501.66766"	"1502.98844"	"1502.98733"	"0.74"	"0.00037"	"7/70"	"7"	"70"	"1434581213.71094"	"HCD"	"MS2"	"5.95716"	"742.9"	"0.897"	"33.5502"	"8136"	"8136"	"8125"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"712.3"	""	"678.7"	""	"828.7"	""	"1486.9"	""	"1691.6"	"1674.3"	""	"144"	"30"	"28.000"	"21.000"	"0.00773272376885696"	"19"	"0.0006737"	"0.006618"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVADALAK"	"[K].kVADALAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"501.66785"	"1502.98899"	"1502.98733"	"1.11"	"0.00055"	"7/70"	"7"	"70"	"1445434494.5625"	"HCD"	"MS2"	"6.105217"	"694.2"	"0.842"	"33.5938"	"8197"	"8197"	"8186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"669.8"	""	"644.4"	""	"776.7"	""	"1385.4"	""	"1604.1"	"1536.6"	""	"144"	"30"	"28.000"	"21.000"	"0.0079676912446392"	"18"	"0.0005564"	"0.003637"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"752.38287"	"1503.75847"	"1503.75876"	"-0.19"	"-0.00014"	"8/80"	"8"	"80"	"2033067.34899902"	"HCD"	"MS2"	"7.862854"	"187.1"	"100.000"	"40.9443"	"11205"	"11205"	"11181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"301.2"	""	"214.4"	""	"207.0"	""	"316.9"	"0.2"	"363.0"	"371.6"	""	"693"	"22"	"35.000"	"28.000"	"0.226309736492349"	"22"	"0.0001889"	"0.0004593"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"752.38293"	"1503.75859"	"1503.75876"	"-0.11"	"-0.00008"	"8/80"	"8"	"80"	"2108008.246521"	"HCD"	"MS2"	"24.78049"	"205.5"	"100.000"	"40.7564"	"11084"	"11084"	"11061"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.8"	""	"256.1"	""	"213.4"	""	"328.4"	""	"426.9"	"414.1"	""	"685"	"20"	"35.000"	"28.000"	"0.351285784741107"	"21"	"0.0001889"	"0.000738"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"752.43353"	"1503.85979"	"1503.88850"	"-19.09"	"-0.01436"	"5/74"	"5"	"74"	"179589.241271973"	"HCD"	"MS2"	"49.49245"	"8.6"	"100.000"	"99.4876"	"34031"	"34031"	"34027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.4"	""	"8.5"	""	"10.7"	""	"22.9"	""	"14.9"	"16.4"	""	"1026"	"8"	"37.000"	"30.000"	"7.92715527483205"	"14"	"0.002981"	"0.05531"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"752.44403"	"1503.88078"	"1503.88850"	"-5.13"	"-0.00386"	"4/74"	"4"	"74"	"971328.01159668"	"HCD"	"MS2"	"44.25672"	"59.4"	"100.000"	"73.8628"	"24552"	"24552"	"24529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.2"	""	"64.6"	""	"81.2"	""	"102.9"	"0.5"	"132.3"	"122.0"	""	"950"	"15"	"36.000"	"29.000"	"1.63566217112586"	"21"	"0.0006037"	"0.003768"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"752.44550"	"1503.88371"	"1503.88850"	"-3.18"	"-0.00239"	"5/74"	"5"	"74"	"124461.99597168"	"HCD"	"MS2"	"9.815799"	"5.3"	"100.000"	"99.1102"	"33922"	"33922"	"33919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.0"	""	"6.1"	""	"6.6"	""	"8.9"	""	"12.4"	"10.4"	""	"863"	"13"	"36.000"	"29.000"	"1.99517410733781"	"18"	"0.0002277"	"0.001357"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"752.44562"	"1503.88396"	"1503.88850"	"-3.02"	"-0.00227"	"7/74"	"7"	"74"	"647835.712646484"	"HCD"	"MS2"	"16.21417"	"35.1"	"100.000"	"75.5980"	"25260"	"25260"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.0"	""	"43.3"	""	"46.6"	""	"62.1"	""	"72.1"	"69.1"	""	"863"	"17"	"36.000"	"29.000"	"0.952754042297655"	"17"	"0.0002277"	"0.001199"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"752.44586"	"1503.88445"	"1503.88850"	"-2.70"	"-0.00203"	"4/74"	"4"	"74"	"1113397.55712891"	"HCD"	"MS2"	"38.68496"	"71.9"	"100.000"	"73.9780"	"24651"	"24651"	"24623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.4"	""	"90.7"	""	"94.6"	""	"125.2"	""	"149.6"	"152.0"	""	"863"	"15"	"36.000"	"29.000"	"1.2473283692407"	"21"	"0.0006037"	"0.005721"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"752.44592"	"1503.88457"	"1503.88850"	"-2.61"	"-0.00197"	"5/74"	"5"	"74"	"433027.805236816"	"HCD"	"MS2"	"22.64701"	"23.7"	"100.000"	"78.6979"	"26565"	"26565"	"26543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.8"	""	"22.0"	""	"37.3"	""	"41.7"	""	"48.6"	"48.0"	""	"883"	"22"	"36.000"	"29.000"	"0.307560605979904"	"17"	"0.0003839"	"0.002015"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"752.44598"	"1503.88469"	"1503.88850"	"-2.53"	"-0.00190"	"4/74"	"4"	"74"	"127945.263305664"	"HCD"	"MS2"	"5.284567"	"6.0"	"100.000"	"98.7475"	"33818"	"33818"	"33816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.0"	""	"6.5"	"2.9"	"9.9"	""	"10.5"	""	"10.9"	"12.0"	""	"922"	"13"	"36.000"	"29.000"	"2.14635189114084"	"20"	"0.0006037"	"0.00412"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"752.44617"	"1503.88506"	"1503.88850"	"-2.29"	"-0.00172"	"5/74"	"5"	"74"	"93731.7852172852"	"HCD"	"MS2"	"7.145144"	"4.5"	"100.000"	"106.6364"	"35517"	"35517"	"35515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.5"	""	"4.7"	""	"5.7"	""	"8.8"	""	"9.4"	"9.8"	""	"922"	"24"	"36.000"	"29.000"	"0.165082457504315"	"19"	"0.0003839"	"0.001847"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"752.44635"	"1503.88542"	"1503.88850"	"-2.05"	"-0.00154"	"5/74"	"5"	"74"	"341494.987609863"	"HCD"	"MS2"	"19.82221"	"21.6"	"100.000"	"80.1888"	"27173"	"27173"	"27151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.7"	""	"25.0"	""	"30.5"	""	"39.9"	""	"39.8"	"46.6"	""	"922"	"17"	"36.000"	"29.000"	"0.997013239438156"	"15"	"0.0007793"	"0.007242"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"752.44641"	"1503.88555"	"1503.88850"	"-1.97"	"-0.00148"	"5/74"	"5"	"74"	"120018.885681152"	"HCD"	"MS2"	"13.87752"	"6.2"	"100.000"	"94.9903"	"32747"	"32747"	"32740"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.6"	""	"6.0"	""	"7.2"	""	"12.4"	""	"13.8"	"12.7"	""	"921"	"29"	"36.000"	"29.000"	"0.053855446956465"	"24"	"0.0001859"	"0.0003574"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"752.44641"	"1503.88555"	"1503.88850"	"-1.97"	"-0.00148"	"5/74"	"5"	"74"	"1522393.203125"	"HCD"	"MS2"	"34.30016"	"70.7"	"100.000"	"72.7973"	"24169"	"24169"	"24143"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.2"	""	"86.5"	""	"96.8"	""	"129.6"	""	"129.6"	"131.9"	""	"921"	"12"	"36.000"	"29.000"	"3.07772374040347"	"20"	"0.0007793"	"0.007241"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"501.96671"	"1503.88556"	"1503.88850"	"-1.95"	"-0.00098"	"8/74"	"8"	"74"	"1076685.25598145"	"HCD"	"MS2"	"57.47085"	"35.5"	"100.000"	"70.9137"	"23400"	"23400"	"23370"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.9"	""	"35.0"	""	"37.7"	""	"80.2"	""	"76.3"	"78.2"	""	"921"	"13"	"36.000"	"29.000"	"2.07123623178359"	"16"	"0.0001889"	"0.0009171"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"501.96680"	"1503.88584"	"1503.88850"	"-1.77"	"-0.00089"	"8/74"	"8"	"74"	"993860.098510742"	"HCD"	"MS2"	"10.04603"	"29.9"	"100.000"	"70.4434"	"23208"	"23208"	"23178"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.3"	""	"35.3"	""	"34.7"	""	"52.2"	"0.2"	"65.8"	"62.3"	""	"921"	"14"	"36.000"	"29.000"	"1.71486380730229"	"17"	"0.0002277"	"0.001205"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44659"	"1503.88591"	"1503.88850"	"-1.72"	"-0.00129"	"5/74"	"5"	"74"	"132261.756713867"	"HCD"	"MS2"	"6.66971"	"6.8"	"100.000"	"94.7289"	"32658"	"32658"	"32649"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"11.4"	""	"10.8"	""	"10.0"	""	"11.3"	"11.5"	""	"924"	"22"	"36.000"	"29.000"	"0.318890789374192"	"14"	"0.0002277"	"0.001195"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"752.44659"	"1503.88591"	"1503.88850"	"-1.72"	"-0.00129"	"7/74"	"7"	"74"	"543431.55645752"	"HCD"	"MS2"	"62.04856"	"27.3"	"100.000"	"80.8117"	"27427"	"27427"	"27406"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.5"	""	"36.2"	""	"38.4"	""	"47.8"	""	"52.3"	"48.5"	""	"924"	"6"	"36.000"	"29.000"	"12.1238896704361"	"17"	"0.0004166"	"0.002113"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44659"	"1503.88591"	"1503.88850"	"-1.72"	"-0.00129"	"5/74"	"5"	"74"	"837197.653442383"	"HCD"	"MS2"	"6.789116"	"41.8"	"100.000"	"73.2330"	"24295"	"24295"	"24273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.0"	""	"43.9"	""	"53.2"	""	"78.3"	""	"86.1"	"87.7"	""	"924"	"27"	"36.000"	"29.000"	"0.08465292631355"	"23"	"0.0001889"	"0.0005637"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"501.96689"	"1503.88611"	"1503.88850"	"-1.59"	"-0.00080"	"9/74"	"9"	"74"	"1719727.69146729"	"HCD"	"MS2"	"33.90408"	"44.0"	"100.000"	"69.9749"	"23017"	"23017"	"22986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.4"	""	"45.5"	""	"55.0"	""	"86.0"	""	"98.4"	"83.1"	""	"927"	"19"	"36.000"	"29.000"	"0.548339761078614"	"15"	"0.0001889"	"0.0009678"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"752.44672"	"1503.88616"	"1503.88850"	"-1.56"	"-0.00117"	"5/74"	"5"	"74"	"101871.834655762"	"HCD"	"MS2"	"10.64454"	"5.8"	"100.000"	"96.0536"	"33042"	"33042"	"33033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.6"	""	"5.1"	""	"8.4"	""	"16.8"	""	"11.9"	"9.0"	""	"927"	"30"	"36.000"	"29.000"	"0.04635"	"23"	"0.0003839"	"0.001801"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"752.44672"	"1503.88616"	"1503.88850"	"-1.56"	"-0.00117"	"5/74"	"5"	"74"	"122102.559020996"	"HCD"	"MS2"	"8.696939"	"5.3"	"100.000"	"98.8564"	"33849"	"33849"	"33844"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"7.1"	""	"8.0"	""	"8.6"	""	"10.9"	"12.4"	""	"927"	"16"	"36.000"	"29.000"	"1.10166547285063"	"20"	"0.0001889"	"0.001071"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44672"	"1503.88616"	"1503.88850"	"-1.56"	"-0.00117"	"4/74"	"4"	"74"	"120023.936889648"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"104.9742"	"35234"	"35234"	"35231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.9"	""	"3.1"	""	"8.1"	""	"8.4"	""	"7.8"	"6.5"	""	"927"	"15"	"36.000"	"29.000"	"1.43896336909749"	"14"	"0.0006037"	"0.005039"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44672"	"1503.88616"	"1503.88850"	"-1.56"	"-0.00117"	"4/74"	"4"	"74"	"152110.512207031"	"HCD"	"MS2"	"26.02025"	"8.7"	"100.000"	"94.4613"	"32583"	"32583"	"32577"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"15.0"	""	"11.2"	""	"16.5"	""	"14.7"	"15.8"	""	"927"	"7"	"36.000"	"29.000"	"8.95467314937345"	"13"	"0.001217"	"0.01712"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"501.96692"	"1503.88620"	"1503.88850"	"-1.53"	"-0.00077"	"11/74"	"11"	"74"	"4331797.14086914"	"HCD"	"MS2"	"23.54258"	"56.1"	"100.000"	"69.0509"	"22639"	"22639"	"22618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.5"	""	"61.0"	""	"68.7"	""	"104.2"	""	"132.5"	"96.2"	""	"927"	"38"	"36.000"	"29.000"	"0.00746534251905129"	"25"	"0.0001889"	"0.0008149"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"752.44678"	"1503.88628"	"1503.88850"	"-1.48"	"-0.00111"	"5/74"	"5"	"74"	"1272516.68005371"	"HCD"	"MS2"	"9.660702"	"57.4"	"100.000"	"71.6833"	"23714"	"23714"	"23690"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.0"	""	"79.2"	""	"75.1"	""	"99.6"	""	"115.3"	"113.8"	""	"927"	"17"	"36.000"	"29.000"	"0.863077387843239"	"16"	"0.0006037"	"0.005942"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.44678"	"1503.88628"	"1503.88850"	"-1.48"	"-0.00111"	"5/74"	"5"	"74"	"1189495.89312744"	"HCD"	"MS2"	"25.10841"	"50.4"	"100.000"	"71.8274"	"23721"	"23721"	"23699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.2"	""	"58.5"	""	"74.0"	""	"89.5"	""	"91.6"	"99.2"	""	"927"	"29"	"36.000"	"29.000"	"0.0623806274104932"	"23"	"0.0001308"	"0.0003083"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.44684"	"1503.88640"	"1503.88850"	"-1.40"	"-0.00105"	"5/74"	"5"	"74"	"425426.912353516"	"HCD"	"MS2"	"13.08276"	"27.1"	"100.000"	"78.7909"	"26552"	"26552"	"26529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.7"	""	"28.5"	""	"40.2"	""	"53.6"	""	"48.4"	"55.2"	""	"920"	"29"	"36.000"	"29.000"	"0.0555594364149118"	"24"	"0.0001889"	"0.001005"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44684"	"1503.88640"	"1503.88850"	"-1.40"	"-0.00105"	"5/74"	"5"	"74"	"1134957.82684326"	"HCD"	"MS2"	"5.018214"	"54.5"	"100.000"	"73.0880"	"24288"	"24288"	"24271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.4"	""	"64.8"	""	"73.0"	""	"97.6"	""	"109.6"	"118.6"	""	"920"	"21"	"36.000"	"29.000"	"0.358721850840699"	"14"	"0.0001889"	"0.0007778"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.44684"	"1503.88640"	"1503.88850"	"-1.40"	"-0.00105"	"5/74"	"5"	"74"	"1832776.99829102"	"HCD"	"MS2"	"32.49878"	"81.9"	"100.000"	"70.3836"	"23183"	"23183"	"23162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.0"	""	"102.4"	""	"106.5"	""	"147.3"	""	"157.3"	"163.8"	""	"920"	"29"	"36.000"	"29.000"	"0.0542947492399795"	"24"	"0.0001889"	"0.0005861"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"752.44684"	"1503.88640"	"1503.88850"	"-1.40"	"-0.00105"	"7/74"	"7"	"74"	"2328290.68499756"	"HCD"	"MS2"	"0"	"104.5"	"100.000"	"69.7728"	"22934"	"22934"	"22913"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.3"	""	"117.9"	""	"132.3"	""	"194.4"	"1.5"	"207.0"	"216.7"	""	"920"	"19"	"36.000"	"29.000"	"0.556875141433221"	"19"	"0.0001308"	"0.0003008"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"752.44690"	"1503.88652"	"1503.88850"	"-1.32"	"-0.00099"	"5/74"	"5"	"74"	"93704.0059204102"	"HCD"	"MS2"	"7.311368"	"4.7"	"100.000"	"97.8208"	"33563"	"33563"	"33560"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"2.8"	""	"7.1"	""	"7.4"	""	"10.2"	"11.0"	""	"920"	"28"	"36.000"	"29.000"	"0.0804929476767341"	"21"	"0.0003839"	"0.001592"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"752.44690"	"1503.88652"	"1503.88850"	"-1.32"	"-0.00099"	"5/74"	"5"	"74"	"116523.097839355"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"93.0749"	"32120"	"32120"	"32110"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.1"	""	"5.3"	""	"10.4"	""	"12.3"	""	"12.3"	"14.2"	""	"920"	"29"	"36.000"	"29.000"	"0.0524514902278137"	"22"	"0.0001889"	"0.001074"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"752.44690"	"1503.88652"	"1503.88850"	"-1.32"	"-0.00099"	"5/74"	"5"	"74"	"96638.451171875"	"HCD"	"MS2"	"10.61416"	"3.5"	"100.000"	"107.1650"	"35610"	"35610"	"35608"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	"5.7"	""	"4.1"	""	"8.6"	""	"6.8"	"5.7"	""	"920"	"25"	"36.000"	"29.000"	"0.147488388927251"	"18"	"0.000523"	"0.003097"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44696"	"1503.88664"	"1503.88850"	"-1.23"	"-0.00093"	"5/74"	"5"	"74"	"111113.792724609"	"HCD"	"MS2"	"11.85949"	"6.2"	"100.000"	"96.1864"	"33074"	"33074"	"33070"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	"10.6"	""	"7.5"	""	"15.1"	""	"9.9"	"12.4"	""	"920"	"21"	"36.000"	"29.000"	"0.393330687926954"	"21"	"0.0001889"	"0.001011"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44696"	"1503.88664"	"1503.88850"	"-1.23"	"-0.00093"	"5/74"	"5"	"74"	"91649.1018676758"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"107.4244"	"35656"	"35656"	"35653"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"6.7"	""	"3.9"	""	"4.9"	""	"6.9"	"7.7"	""	"920"	"16"	"36.000"	"29.000"	"1.23810600980638"	"13"	"0.000494"	"0.002665"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44696"	"1503.88664"	"1503.88850"	"-1.23"	"-0.00093"	"5/74"	"5"	"74"	"220760.619262695"	"HCD"	"MS2"	"11.96427"	"13.1"	"100.000"	"84.2321"	"28822"	"28822"	"28801"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.0"	""	"15.1"	""	"18.5"	""	"24.7"	""	"26.6"	"26.3"	""	"920"	"33"	"36.000"	"29.000"	"0.0254541050239239"	"26"	"0.0001889"	"0.0004305"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44696"	"1503.88664"	"1503.88850"	"-1.23"	"-0.00093"	"5/74"	"5"	"74"	"107539.137634277"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"118.4427"	"37469"	"37469"	"37465"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"1.7"	""	"4.8"	""	"7.8"	""	"7.5"	"10.6"	""	"920"	"7"	"36.000"	"29.000"	"8.72484723757127"	"13"	"0.001058"	"0.01316"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44696"	"1503.88664"	"1503.88850"	"-1.23"	"-0.00093"	"5/74"	"5"	"74"	"106045.402893066"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"117.9054"	"37383"	"37383"	"37380"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.8"	""	"2.7"	""	"6.8"	""	"6.9"	""	"6.2"	"9.6"	""	"920"	"16"	"36.000"	"29.000"	"1.09083190460436"	"14"	"0.001058"	"0.01329"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44696"	"1503.88664"	"1503.88850"	"-1.23"	"-0.00093"	"5/74"	"5"	"74"	"121846.714172363"	"HCD"	"MS2"	"7.06019"	"3.3"	"100.000"	"117.3890"	"37295"	"37295"	"37292"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.8"	""	"2.8"	""	"3.5"	""	"7.1"	""	"8.1"	"7.4"	""	"920"	"16"	"36.000"	"29.000"	"1.12916610121511"	"14"	"0.00103"	"0.01267"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44696"	"1503.88664"	"1503.88850"	"-1.23"	"-0.00093"	"5/74"	"5"	"74"	"132296.640136719"	"HCD"	"MS2"	"5.945902"	"3.2"	"100.000"	"119.7294"	"37699"	"37699"	"37695"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"4.6"	""	"5.5"	""	"4.7"	""	"5.5"	"5.3"	""	"920"	"15"	"36.000"	"29.000"	"1.37961475873432"	"13"	"0.0006037"	"0.003805"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44696"	"1503.88664"	"1503.88850"	"-1.23"	"-0.00093"	"5/74"	"5"	"74"	"3754482.67510986"	"HCD"	"MS2"	"25.19379"	"169.1"	"100.000"	"66.6137"	"21653"	"21653"	"21635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.1"	""	"213.3"	""	"205.4"	""	"321.0"	"1.9"	"306.6"	"346.1"	""	"920"	"30"	"36.000"	"29.000"	"0.0510220415020704"	"24"	"0.0001889"	"0.0004118"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7045"	"0.0000"	"1"	"1"	"1"	"501.96710"	"1503.88675"	"1503.88850"	"-1.16"	"-0.00058"	"11/74"	"11"	"74"	"9391133.58856201"	"HCD"	"MS2"	"5.342733"	"44.0"	"81.159"	"68.1135"	"22205"	"22205"	"22186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.9"	""	"48.9"	""	"55.9"	""	"91.5"	"0.9"	"91.6"	"84.6"	""	"920"	"44"	"36.000"	"29.000"	"0.0019131888082725"	"29"	"0.0001889"	"0.0006406"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.44702"	"1503.88677"	"1503.88850"	"-1.15"	"-0.00087"	"5/74"	"5"	"74"	"102415.661437988"	"HCD"	"MS2"	"11.0424"	"5.4"	"100.000"	"96.3038"	"33116"	"33116"	"33113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.7"	""	"7.1"	""	"6.9"	""	"12.7"	""	"10.0"	"9.1"	""	"920"	"25"	"36.000"	"29.000"	"0.131752186615703"	"19"	"0.0004166"	"0.002509"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"752.44702"	"1503.88677"	"1503.88850"	"-1.15"	"-0.00087"	"5/74"	"5"	"74"	"136184.234375"	"HCD"	"MS2"	"12.34897"	"6.7"	"100.000"	"92.0000"	"31765"	"31765"	"31753"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.5"	""	"5.4"	""	"12.2"	""	"13.8"	""	"13.5"	"13.6"	""	"920"	"28"	"36.000"	"29.000"	"0.0814250120826013"	"23"	"0.0001889"	"0.0008383"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"752.44702"	"1503.88677"	"1503.88850"	"-1.15"	"-0.00087"	"3/74"	"3"	"74"	"136238.841430664"	"HCD"	"MS2"	"9.694234"	"3.5"	"100.000"	"112.8243"	"36545"	"36545"	"36541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"4.7"	""	"2.7"	""	"8.7"	""	"6.4"	"7.1"	""	"920"	"4"	"36.000"	"29.000"	"16.7786815585779"	"17"	"0.005323"	"0.1635"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"501.96713"	"1503.88684"	"1503.88850"	"-1.10"	"-0.00055"	"11/74"	"11"	"74"	"60961391.9968262"	"HCD"	"MS2"	"14.49827"	"174.2"	"88.978"	"66.8489"	"21749"	"21749"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.4"	""	"208.9"	""	"222.9"	""	"343.6"	""	"333.8"	"340.7"	""	"920"	"42"	"36.000"	"29.000"	"0.00314599357749457"	"27"	"0.0004166"	"0.002301"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"5/74"	"5"	"74"	"80699.1439819336"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"107.6829"	"35700"	"35700"	"35697"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.3"	""	"3.2"	""	"5.3"	""	"7.1"	""	"8.9"	"9.3"	""	"918"	"20"	"36.000"	"29.000"	"0.412869389922286"	"14"	"0.0006037"	"0.004668"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"5/74"	"5"	"74"	"85239.4754638672"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"103.3387"	"34910"	"34910"	"34905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	""	""	"9.7"	""	"4.7"	""	"9.9"	"8.6"	""	"918"	"27"	"36.000"	"29.000"	"0.0926430160929836"	"21"	"0.000523"	"0.002798"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"4/74"	"4"	"74"	"75474.5405273438"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"113.6192"	"36667"	"36667"	"36665"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	"2.4"	""	"4.6"	""	"5.1"	""	"4.8"	"5.9"	""	"918"	"13"	"36.000"	"29.000"	"2.1223288882226"	"19"	"0.002829"	"0.04627"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"3"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"6/74"	"6"	"74"	"84510.8836669922"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"100.8886"	"34384"	"34384"	"34380"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"4.6"	""	"7.2"	""	"8.7"	""	"10.0"	"10.4"	""	"918"	"11"	"36.000"	"29.000"	"4.02543376904928"	"18"	"0.0006037"	"0.004381"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"5/74"	"5"	"74"	"82026.0101928711"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"115.3279"	"36936"	"36936"	"36934"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"2.7"	""	"5.6"	""	"6.3"	""	"5.9"	"9.1"	""	"918"	"9"	"36.000"	"29.000"	"5.80513983489258"	"13"	"0.001007"	"0.01105"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"4/74"	"4"	"74"	"93906.7126464844"	"HCD"	"MS2"	"25.27273"	"4.4"	"100.000"	"102.6445"	"34765"	"34765"	"34762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"4.3"	""	"3.5"	""	"11.8"	""	"9.2"	"9.4"	""	"918"	"13"	"36.000"	"29.000"	"2.30044940234918"	"14"	"0.0008731"	"0.009562"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"5/74"	"5"	"74"	"95961.1591796875"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"96.5844"	"33195"	"33195"	"33192"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"6.2"	""	"6.8"	""	"7.5"	""	"10.1"	"9.0"	""	"918"	"30"	"36.000"	"29.000"	"0.0480632003555362"	"24"	"0.0001859"	"0.0003399"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"5/74"	"5"	"74"	"101752.595397949"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"113.9971"	"36722"	"36722"	"36719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1.9"	""	"5.2"	""	"2.6"	""	"2.6"	""	"6.9"	"6.6"	""	"918"	"17"	"36.000"	"29.000"	"0.965634303852812"	"14"	"0.00103"	"0.01178"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"5/74"	"5"	"74"	"116102.434265137"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"116.6201"	"37163"	"37163"	"37160"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.3"	""	"4.8"	""	"5.5"	""	"6.7"	""	"5.9"	"8.5"	""	"918"	"21"	"36.000"	"29.000"	"0.366279561456001"	"14"	"0.00103"	"0.01231"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"5/74"	"5"	"74"	"240038.050231934"	"HCD"	"MS2"	"41.67301"	"16.1"	"100.000"	"83.9859"	"28671"	"28671"	"28644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.8"	""	"22.0"	""	"23.7"	""	"29.7"	""	"28.3"	"25.6"	""	"918"	"18"	"36.000"	"29.000"	"0.754766620955653"	"14"	"0.0003839"	"0.001794"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"7/74"	"7"	"74"	"811332.908691406"	"HCD"	"MS2"	"35.17888"	"40.3"	"100.000"	"73.5468"	"24423"	"24423"	"24401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.1"	""	"45.5"	""	"57.7"	""	"80.4"	"0.3"	"77.5"	"82.1"	""	"918"	"17"	"36.000"	"29.000"	"0.948009491517032"	"17"	"0.0006037"	"0.003959"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44708"	"1503.88689"	"1503.88850"	"-1.07"	"-0.00081"	"5/74"	"5"	"74"	"1246354.7010498"	"HCD"	"MS2"	"8.341604"	"64.7"	"100.000"	"70.8554"	"23324"	"23324"	"23299"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.2"	""	"77.5"	""	"84.8"	""	"117.9"	"0.4"	"136.7"	"122.7"	""	"918"	"30"	"36.000"	"29.000"	"0.0436327600288233"	"25"	"0.0002277"	"0.001302"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"752.44714"	"1503.88701"	"1503.88850"	"-0.99"	"-0.00075"	"5/74"	"5"	"74"	"84787.8075561523"	"HCD"	"MS2"	"13.06243"	"5.0"	"100.000"	"107.9421"	"35746"	"35746"	"35744"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.5"	"1.8"	"5.1"	""	"5.6"	""	"7.7"	""	"12.3"	"11.0"	""	"918"	"24"	"36.000"	"29.000"	"0.183574640140344"	"15"	"0.0003839"	"0.001976"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"752.44714"	"1503.88701"	"1503.88850"	"-0.99"	"-0.00075"	"5/74"	"5"	"74"	"107210.395385742"	"HCD"	"MS2"	"18.70411"	"6.4"	"100.000"	"89.9289"	"31043"	"31043"	"31033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"6.0"	""	"10.2"	""	"11.8"	""	"11.5"	"16.1"	""	"918"	"32"	"36.000"	"29.000"	"0.029161689771995"	"26"	"0.0001889"	"0.0007087"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"752.44714"	"1503.88701"	"1503.88850"	"-0.99"	"-0.00075"	"5/74"	"5"	"74"	"110767.402038574"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"117.6467"	"37337"	"37337"	"37334"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"2.1"	""	"5.1"	""	"7.5"	""	"7.8"	"7.1"	""	"918"	"4"	"36.000"	"29.000"	"16.3988232711735"	"13"	"0.00252"	"0.03815"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44714"	"1503.88701"	"1503.88850"	"-0.99"	"-0.00075"	"5/74"	"5"	"74"	"106394.755737305"	"HCD"	"MS2"	"10.31465"	"4.4"	"100.000"	"102.9004"	"34817"	"34817"	"34814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"4.4"	""	"5.9"	""	"7.3"	""	"10.3"	"9.3"	""	"918"	"20"	"36.000"	"29.000"	"0.505606543079509"	"14"	"0.0003839"	"0.001908"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"752.44714"	"1503.88701"	"1503.88850"	"-0.99"	"-0.00075"	"5/74"	"5"	"74"	"153994.741638184"	"HCD"	"MS2"	"9.969883"	"5.9"	"100.000"	"95.6753"	"32924"	"32924"	"32919"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.4"	""	"7.0"	""	"9.6"	""	"12.8"	""	"8.7"	"14.8"	""	"918"	"26"	"36.000"	"29.000"	"0.102994180301629"	"20"	"0.0006037"	"0.005543"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"752.44714"	"1503.88701"	"1503.88850"	"-0.99"	"-0.00075"	"5/74"	"5"	"74"	"199175.84173584"	"HCD"	"MS2"	"9.67043"	"6.3"	"100.000"	"93.6339"	"32298"	"32298"	"32292"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.7"	""	"7.0"	""	"8.1"	""	"12.1"	""	"12.2"	"15.5"	""	"918"	"24"	"36.000"	"29.000"	"0.182310921206473"	"19"	"0.0004557"	"0.002609"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"752.44714"	"1503.88701"	"1503.88850"	"-0.99"	"-0.00075"	"5/74"	"5"	"74"	"1088861.07214355"	"HCD"	"MS2"	"13.76642"	"62.5"	"100.000"	"71.1622"	"23449"	"23449"	"23427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.2"	""	"67.4"	""	"80.5"	""	"115.9"	""	"130.4"	"130.9"	""	"918"	"28"	"36.000"	"29.000"	"0.0759998413232513"	"23"	"0.0001859"	"0.0003496"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.44714"	"1503.88701"	"1503.88850"	"-0.99"	"-0.00075"	"5/74"	"5"	"74"	"1589996.84106445"	"HCD"	"MS2"	"31.25247"	"79.6"	"100.000"	"72.9192"	"24167"	"24167"	"24145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.4"	""	"94.4"	""	"100.8"	""	"147.2"	"1.0"	"138.1"	"157.1"	""	"918"	"29"	"36.000"	"29.000"	"0.0553111496630654"	"24"	"0.000523"	"0.002971"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"501.96722"	"1503.88712"	"1503.88850"	"-0.92"	"-0.00046"	"8/74"	"8"	"74"	"1944656.89074707"	"HCD"	"MS2"	"17.6841"	"36.5"	"100.000"	"69.3850"	"22776"	"22776"	"22746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.4"	""	"38.3"	""	"32.5"	""	"87.9"	""	"81.0"	"75.7"	""	"919"	"20"	"36.000"	"29.000"	"0.478944858806223"	"17"	"0.0001889"	"0.0007666"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"501.96722"	"1503.88712"	"1503.88850"	"-0.92"	"-0.00046"	"11/74"	"11"	"74"	"117164773.055664"	"HCD"	"MS2"	"2.374058"	"30.6"	"8.364"	"67.7068"	"22091"	"22091"	"22074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.4"	""	"34.2"	""	"41.2"	""	"66.9"	""	"55.1"	"71.9"	""	"919"	"39"	"36.000"	"29.000"	"0.00637214303366633"	"25"	"0.000523"	"0.003181"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"501.96722"	"1503.88712"	"1503.88850"	"-0.92"	"-0.00046"	"11/74"	"11"	"74"	"701987150.257813"	"HCD"	"MS2"	"2.211409"	"43.5"	"2.071"	"67.1126"	"21853"	"21853"	"21843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.8"	""	"48.8"	""	"66.0"	""	"89.4"	""	"79.7"	"85.8"	""	"919"	"42"	"36.000"	"29.000"	"0.00289924899788649"	"27"	"0.00103"	"0.01255"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"4/74"	"4"	"74"	"63746.3427124023"	"HCD"	"MS2"	"5.391211"	"3.5"	"100.000"	"109.2339"	"35970"	"35970"	"35967"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"3.7"	""	"4.5"	""	"5.0"	""	"7.0"	"7.7"	""	"919"	"19"	"36.000"	"29.000"	"0.596053875017128"	"22"	"0.001966"	"0.02827"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"4/74"	"4"	"74"	"81640.3039550781"	"HCD"	"MS2"	"18.91096"	"4.1"	"100.000"	"105.9609"	"35392"	"35392"	"35389"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"2.5"	""	"6.6"	""	"9.1"	""	"4.9"	"6.8"	""	"919"	"19"	"36.000"	"29.000"	"0.566611670868684"	"21"	"0.0004166"	"0.002177"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"5/74"	"5"	"74"	"111239.889892578"	"HCD"	"MS2"	"100"	"7.1"	"100.000"	"93.9951"	"32394"	"32394"	"32386"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"8.5"	""	"8.5"	""	"12.4"	""	"19.3"	"14.0"	""	"919"	"13"	"36.000"	"29.000"	"2.1541974909575"	"14"	"0.0008125"	"0.007825"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"5/74"	"5"	"74"	"109622.836975098"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"92.7978"	"32027"	"32027"	"32017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"6.2"	""	"6.4"	""	"12.3"	""	"11.9"	"16.2"	""	"919"	"29"	"36.000"	"29.000"	"0.0553714014600841"	"21"	"0.0001889"	"0.0009207"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"5/74"	"5"	"74"	"118951.989318848"	"HCD"	"MS2"	"5.659492"	"6.6"	"100.000"	"92.2613"	"31855"	"31855"	"31849"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	"8.6"	""	"10.3"	""	"11.9"	""	"13.8"	"11.7"	""	"919"	"26"	"36.000"	"29.000"	"0.105751251509921"	"20"	"0.0003839"	"0.001897"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"5/74"	"5"	"74"	"113961.115600586"	"HCD"	"MS2"	"23.13574"	"6.7"	"100.000"	"91.3983"	"31568"	"31568"	"31562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.9"	""	"9.5"	""	"4.5"	""	"14.5"	""	"14.1"	"15.5"	""	"919"	"27"	"36.000"	"29.000"	"0.102161089475432"	"20"	"0.0001889"	"0.0009696"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"5/74"	"5"	"74"	"90229.1660766602"	"HCD"	"MS2"	"0"	"2.3"	"100.000"	"114.7962"	"36852"	"36852"	"36849"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"5.1"	""	"3.7"	""	"3.8"	""	"3.8"	"6.0"	""	"919"	"5"	"36.000"	"29.000"	"15.7501797918094"	"14"	"0.00119"	"0.01582"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"5/74"	"5"	"74"	"223459.906799316"	"HCD"	"MS2"	"21.41976"	"14.1"	"100.000"	"83.7875"	"28641"	"28641"	"28615"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.4"	""	"17.6"	""	"16.5"	""	"27.2"	""	"26.3"	"28.7"	""	"919"	"33"	"36.000"	"29.000"	"0.0253679583349508"	"26"	"0.0001889"	"0.0004526"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"4/74"	"4"	"74"	"129002.074584961"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"110.3047"	"36153"	"36153"	"36150"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.8"	""	"4.5"	""	"4.0"	""	"7.9"	""	"6.2"	"6.5"	""	"919"	"14"	"36.000"	"29.000"	"1.65685886468445"	"18"	"0.003197"	"0.06676"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"5/74"	"5"	"74"	"255123.280029297"	"HCD"	"MS2"	"18.73258"	"15.9"	"100.000"	"83.6015"	"28514"	"28514"	"28492"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.5"	""	"15.8"	""	"22.8"	""	"27.3"	"0.8"	"31.2"	"33.8"	""	"919"	"27"	"36.000"	"29.000"	"0.0845834734674985"	"23"	"0.0001889"	"0.0006188"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"5/74"	"5"	"74"	"460658.541564941"	"HCD"	"MS2"	"35.77581"	"29.6"	"100.000"	"77.4036"	"25986"	"25986"	"25961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.1"	""	"35.0"	""	"46.7"	""	"52.2"	"1.1"	"52.4"	"58.0"	""	"919"	"27"	"36.000"	"29.000"	"0.102632643639063"	"22"	"0.0001889"	"0.001014"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"5/74"	"5"	"74"	"3035892.63043213"	"HCD"	"MS2"	"19.57748"	"137.0"	"100.000"	"66.6492"	"21615"	"21615"	"21593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.8"	""	"155.3"	""	"175.9"	""	"268.9"	""	"272.3"	"278.5"	""	"919"	"30"	"36.000"	"29.000"	"0.0466966274374085"	"24"	"0.0001889"	"0.000594"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"752.44720"	"1503.88713"	"1503.88850"	"-0.91"	"-0.00068"	"9/74"	"9"	"74"	"983801139.652344"	"HCD"	"MS2"	"0"	"466.8"	"1.392"	"66.9227"	"21780"	"21780"	"21763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"530.9"	""	"539.1"	""	"574.7"	""	"967.5"	"12.0"	"899.2"	"906.1"	""	"919"	"35"	"36.000"	"29.000"	"0.0142654513074498"	"25"	"0.0003839"	"0.00205"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"752.44727"	"1503.88725"	"1503.88850"	"-0.83"	"-0.00062"	"5/74"	"5"	"74"	"100939.94152832"	"HCD"	"MS2"	"4.542595"	"4.9"	"100.000"	"92.5257"	"31942"	"31942"	"31936"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.5"	""	"5.2"	""	"3.5"	""	"9.7"	"1.5"	"12.0"	"10.7"	""	"909"	"28"	"36.000"	"29.000"	"0.0692681976600868"	"24"	"0.0001889"	"0.001038"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"3"	"752.44727"	"1503.88725"	"1503.88850"	"-0.83"	"-0.00062"	"4/74"	"4"	"74"	"79531.5595703125"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"119.2179"	"37610"	"37610"	"37605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.0"	""	"3.6"	""	"4.6"	""	"8.5"	""	"9.3"	"8.2"	""	"909"	"17"	"36.000"	"29.000"	"0.854149493237084"	"21"	"0.0007076"	"0.006841"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"752.44727"	"1503.88725"	"1503.88850"	"-0.83"	"-0.00062"	"5/74"	"5"	"74"	"111386.37487793"	"HCD"	"MS2"	"15.36221"	"6.7"	"100.000"	"90.7056"	"31321"	"31321"	"31311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"7.8"	""	"9.1"	""	"12.0"	""	"15.3"	"10.4"	""	"909"	"25"	"36.000"	"29.000"	"0.155429656622481"	"20"	"0.0004166"	"0.002162"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44727"	"1503.88725"	"1503.88850"	"-0.83"	"-0.00062"	"4/74"	"4"	"74"	"80225.8551635742"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"114.2708"	"36766"	"36766"	"36762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.6"	""	"1.6"	""	"5.0"	""	"5.3"	""	"7.2"	"6.5"	""	"909"	"8"	"36.000"	"29.000"	"7.25327072419095"	"13"	"0.001454"	"0.02007"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"752.44727"	"1503.88725"	"1503.88850"	"-0.83"	"-0.00062"	"5/74"	"5"	"74"	"90011.6831665039"	"HCD"	"MS2"	"13.48522"	"3.8"	"100.000"	"106.8982"	"35564"	"35564"	"35562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.9"	""	"4.2"	""	"4.4"	""	"7.6"	""	"6.5"	"9.2"	""	"909"	"29"	"36.000"	"29.000"	"0.0569552664010873"	"22"	"0.0001889"	"0.0006398"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44727"	"1503.88725"	"1503.88850"	"-0.83"	"-0.00062"	"5/74"	"5"	"74"	"92472.0087280273"	"HCD"	"MS2"	"7.68624"	"3.7"	"100.000"	"106.3781"	"35470"	"35470"	"35468"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.7"	""	"5.0"	""	"3.4"	""	"5.4"	""	"9.9"	"8.1"	""	"909"	"22"	"36.000"	"29.000"	"0.260335796083059"	"14"	"0.0006037"	"0.00396"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44727"	"1503.88725"	"1503.88850"	"-0.83"	"-0.00062"	"5/74"	"5"	"74"	"104900.335693359"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"116.4225"	"37145"	"37145"	"37143"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.5"	""	"4.3"	""	"6.0"	""	"7.8"	""	"7.3"	"7.1"	""	"909"	"10"	"36.000"	"29.000"	"4.16422212760449"	"13"	"0.0009092"	"0.009638"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44727"	"1503.88725"	"1503.88850"	"-0.83"	"-0.00062"	"5/74"	"5"	"74"	"159729.305786133"	"HCD"	"MS2"	"42.85749"	"7.3"	"100.000"	"100.1047"	"34200"	"34200"	"34198"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.1"	""	"6.2"	""	"7.0"	""	"17.9"	""	"13.2"	"13.0"	""	"909"	"6"	"36.000"	"29.000"	"10.4359956056707"	"13"	"0.0006037"	"0.00615"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.44727"	"1503.88725"	"1503.88850"	"-0.83"	"-0.00062"	"5/74"	"5"	"74"	"545893.70513916"	"HCD"	"MS2"	"31.25691"	"35.0"	"100.000"	"75.9051"	"25385"	"25385"	"25361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.0"	""	"43.1"	""	"49.8"	""	"58.1"	"1.0"	"63.4"	"71.5"	""	"909"	"29"	"36.000"	"29.000"	"0.0603300781038166"	"23"	"0.0002277"	"0.001151"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"752.44727"	"1503.88725"	"1503.88850"	"-0.83"	"-0.00062"	"5/74"	"5"	"74"	"11472656.8671265"	"HCD"	"MS2"	"0.6054302"	"239.7"	"57.562"	"68.0986"	"22251"	"22251"	"22234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"264.4"	""	"258.2"	""	"316.7"	""	"470.9"	"5.7"	"479.2"	"480.5"	""	"909"	"31"	"36.000"	"29.000"	"0.0369431469596583"	"25"	"0"	"0.0001494"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"5/74"	"5"	"74"	"110460.090209961"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"93.3692"	"32217"	"32217"	"32211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"8.8"	""	"11.0"	""	"9.7"	""	"9.6"	"14.6"	""	"909"	"33"	"36.000"	"29.000"	"0.0235794617693213"	"27"	"0.0001889"	"0.000392"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"3"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"4/74"	"4"	"74"	"86308.825378418"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"115.3945"	"36965"	"36965"	"36963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"4.8"	""	"4.1"	""	"8.0"	""	"9.9"	"9.5"	""	"909"	"13"	"36.000"	"29.000"	"2.55584132299014"	"14"	"0.001557"	"0.02093"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"5/74"	"5"	"74"	"114948.273193359"	"HCD"	"MS2"	"5.685918"	"7.7"	"100.000"	"94.5867"	"32598"	"32598"	"32591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"11.1"	""	"11.7"	""	"15.2"	""	"15.9"	"14.3"	""	"909"	"27"	"36.000"	"29.000"	"0.0915237671562455"	"20"	"0.0001889"	"0.0008324"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"5/74"	"5"	"74"	"100424.844299316"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"96.9294"	"33298"	"33298"	"33292"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"6.7"	""	"7.3"	""	"11.9"	""	"9.6"	"11.1"	""	"909"	"19"	"36.000"	"29.000"	"0.563033048578052"	"15"	"0.0003839"	"0.001723"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"5/74"	"5"	"74"	"87015.8278198242"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"104.1543"	"35075"	"35075"	"35073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"4.5"	""	"7.1"	""	"6.9"	""	"8.3"	"8.1"	""	"909"	"26"	"36.000"	"29.000"	"0.11844967884745"	"19"	"0.000494"	"0.00265"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"3/74"	"3"	"74"	"87590.9588623047"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"112.1843"	"36450"	"36450"	"36446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"4.5"	""	"5.5"	""	"6.1"	""	"6.3"	"5.7"	""	"909"	"1"	"36.000"	"29.000"	"36.2688585363295"	"13"	"0.006061"	"0.2112"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"5/74"	"5"	"74"	"94140.3461914063"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"106.1128"	"35424"	"35424"	"35422"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"3.5"	""	"5.7"	""	"6.1"	""	"7.8"	"6.1"	""	"909"	"22"	"36.000"	"29.000"	"0.256763855052191"	"18"	"0.0003839"	"0.001741"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"5/74"	"5"	"74"	"116422.698791504"	"HCD"	"MS2"	"22.42125"	"7.0"	"100.000"	"91.7078"	"31665"	"31665"	"31654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	"7.4"	""	"10.1"	""	"10.2"	""	"16.3"	"16.0"	""	"909"	"27"	"36.000"	"29.000"	"0.0915237671562455"	"20"	"0.0003839"	"0.001711"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"5/74"	"5"	"74"	"122439.487976074"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"118.1835"	"37426"	"37426"	"37422"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.6"	""	"5.3"	""	"6.6"	""	"7.3"	""	"6.0"	"8.1"	""	"909"	"23"	"36.000"	"29.000"	"0.243519580839814"	"14"	"0.001846"	"0.02588"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"5/74"	"5"	"74"	"259466.282714844"	"HCD"	"MS2"	"18.48213"	"18.4"	"100.000"	"81.6246"	"27708"	"27708"	"27680"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.8"	""	"21.7"	""	"23.5"	""	"35.0"	"2.5"	"29.8"	"39.1"	""	"909"	"29"	"36.000"	"29.000"	"0.0513492243218786"	"24"	"0.0001889"	"0.0006066"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"4/74"	"4"	"74"	"119918.517150879"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"112.5701"	"36507"	"36507"	"36504"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.1"	""	"3.4"	""	"7.0"	""	"4.5"	""	"6.3"	"5.1"	""	"909"	"10"	"36.000"	"29.000"	"4.5659787668153"	"13"	"0.003137"	"0.06378"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"5/74"	"5"	"74"	"148607.355957031"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"119.4885"	"37672"	"37672"	"37669"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"6.0"	""	"7.4"	""	"9.2"	""	"6.7"	"9.1"	""	"909"	"19"	"36.000"	"29.000"	"0.596394854104228"	"14"	"0.0006037"	"0.005105"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"752.44733"	"1503.88738"	"1503.88850"	"-0.75"	"-0.00056"	"5/74"	"5"	"74"	"558551.507873535"	"HCD"	"MS2"	"17.81183"	"34.8"	"100.000"	"75.9321"	"25448"	"25448"	"25423"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.4"	""	"42.7"	""	"47.3"	""	"66.1"	""	"68.6"	"66.5"	""	"909"	"29"	"36.000"	"29.000"	"0.0532762793641625"	"24"	"0.0001889"	"0.000852"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"501.96735"	"1503.88749"	"1503.88850"	"-0.68"	"-0.00034"	"11/74"	"11"	"74"	"4573662.45941162"	"HCD"	"MS2"	"60.74533"	"50.6"	"100.000"	"69.0545"	"22589"	"22589"	"22570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.7"	""	"62.2"	""	"55.1"	""	"90.4"	"0.7"	"121.7"	"102.5"	""	"909"	"42"	"36.000"	"29.000"	"0.00320282999845568"	"27"	"0.0001889"	"0.0004558"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5217"	"0.0000"	"1"	"1"	"1"	"501.96735"	"1503.88749"	"1503.88850"	"-0.68"	"-0.00034"	"9/74"	"9"	"74"	"3767570.11871338"	"HCD"	"MS2"	"27.98773"	"59.1"	"100.000"	"68.6726"	"22485"	"22485"	"22458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.7"	""	"76.3"	""	"77.2"	""	"114.1"	"0.0"	"113.2"	"104.8"	""	"909"	"23"	"36.000"	"29.000"	"0.214552652254302"	"25"	"0.0002277"	"0.001112"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"752.44739"	"1503.88750"	"1503.88850"	"-0.67"	"-0.00050"	"5/74"	"5"	"74"	"100962.137512207"	"HCD"	"MS2"	"5.854535"	"5.7"	"100.000"	"96.4445"	"33147"	"33147"	"33144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.6"	""	"5.6"	""	"8.7"	""	"15.3"	""	"10.0"	"11.4"	""	"909"	"29"	"36.000"	"29.000"	"0.0641998314031041"	"21"	"0.0003146"	"0.001416"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"752.44739"	"1503.88750"	"1503.88850"	"-0.67"	"-0.00050"	"5/74"	"5"	"74"	"81533.493347168"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"112.0157"	"36427"	"36427"	"36425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	"2.0"	""	"5.6"	""	"7.1"	""	"7.8"	"6.7"	""	"909"	"24"	"36.000"	"29.000"	"0.190780458223913"	"15"	"0.0008453"	"0.008251"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44739"	"1503.88750"	"1503.88850"	"-0.67"	"-0.00050"	"4/74"	"4"	"74"	"120695.32635498"	"HCD"	"MS2"	"7.567035"	"4.0"	"100.000"	"109.4901"	"36013"	"36013"	"36010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.6"	""	"5.3"	""	"3.6"	""	"7.8"	""	"13.5"	"5.1"	""	"909"	"12"	"36.000"	"29.000"	"2.88093783766273"	"13"	"0.00274"	"0.04417"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"752.44739"	"1503.88750"	"1503.88850"	"-0.67"	"-0.00050"	"5/74"	"5"	"74"	"139882.467773438"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"101.6737"	"34555"	"34555"	"34552"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"8.5"	""	"7.5"	""	"10.2"	""	"6.8"	"9.4"	""	"909"	"23"	"36.000"	"29.000"	"0.241843203836758"	"18"	"0.0002277"	"0.001177"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44739"	"1503.88750"	"1503.88850"	"-0.67"	"-0.00050"	"5/74"	"5"	"74"	"491992.05682373"	"HCD"	"MS2"	"36.01396"	"27.7"	"100.000"	"77.3448"	"26013"	"26013"	"25989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.2"	""	"31.8"	""	"37.3"	""	"44.1"	""	"57.6"	"58.9"	""	"909"	"17"	"36.000"	"29.000"	"0.813830360659041"	"14"	"0.0006037"	"0.00391"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.44745"	"1503.88762"	"1503.88850"	"-0.59"	"-0.00044"	"5/74"	"5"	"74"	"113837.20324707"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"94.8597"	"32690"	"32690"	"32686"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"6.2"	""	"10.3"	""	"13.5"	""	"12.7"	"15.2"	""	"909"	"29"	"36.000"	"29.000"	"0.0557871130561496"	"24"	"0.0002277"	"0.001149"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44745"	"1503.88762"	"1503.88850"	"-0.59"	"-0.00044"	"5/74"	"5"	"74"	"107031.290649414"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"98.3365"	"33704"	"33704"	"33698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"8.2"	""	"7.6"	""	"8.1"	""	"5.9"	"9.4"	""	"909"	"30"	"36.000"	"29.000"	"0.0471556664989286"	"25"	"0.0001889"	"0.0006452"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"752.44745"	"1503.88762"	"1503.88850"	"-0.59"	"-0.00044"	"5/74"	"5"	"74"	"119417.449829102"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"95.5189"	"32902"	"32902"	"32898"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"7.0"	""	"4.2"	""	"9.3"	""	"13.6"	"11.8"	""	"909"	"30"	"36.000"	"29.000"	"0.0424164079712232"	"22"	"0.0003839"	"0.001752"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44745"	"1503.88762"	"1503.88850"	"-0.59"	"-0.00044"	"4/74"	"4"	"74"	"104853.591003418"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"117.1326"	"37250"	"37250"	"37246"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"4.5"	""	"4.4"	""	"8.3"	""	"4.4"	"6.0"	""	"909"	"7"	"36.000"	"29.000"	"9.13132683330667"	"13"	"0.001718"	"0.02364"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44745"	"1503.88762"	"1503.88850"	"-0.59"	"-0.00044"	"4/74"	"4"	"74"	"118288.120727539"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"116.9402"	"37230"	"37230"	"37228"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"4.0"	""	"3.5"	""	"9.4"	""	"9.1"	"7.8"	""	"909"	"7"	"36.000"	"29.000"	"8.62052841190466"	"13"	"0.007192"	"0.2674"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"752.44745"	"1503.88762"	"1503.88850"	"-0.59"	"-0.00044"	"5/74"	"5"	"74"	"145784.643615723"	"HCD"	"MS2"	"11.97792"	"5.0"	"100.000"	"101.4151"	"34501"	"34501"	"34498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"4.0"	""	"7.3"	""	"8.9"	""	"12.4"	"8.9"	""	"909"	"26"	"36.000"	"29.000"	"0.111566520217885"	"22"	"0.0001889"	"0.0003942"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44745"	"1503.88762"	"1503.88850"	"-0.59"	"-0.00044"	"4/74"	"4"	"74"	"142667.204467773"	"HCD"	"MS2"	"18.5421"	"3.9"	"100.000"	"118.6987"	"37513"	"37513"	"37509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.1"	""	"5.6"	""	"6.7"	""	"8.0"	""	"5.5"	"7.3"	""	"909"	"6"	"36.000"	"29.000"	"11.79054520083"	"13"	"0.0007793"	"0.007358"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"752.44745"	"1503.88762"	"1503.88850"	"-0.59"	"-0.00044"	"5/74"	"5"	"74"	"146952.559204102"	"HCD"	"MS2"	"9.466321"	"5.7"	"100.000"	"95.7807"	"32971"	"32971"	"32966"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"6.7"	""	"8.4"	""	"8.0"	""	"8.2"	"16.0"	""	"909"	"29"	"36.000"	"29.000"	"0.0625941703612298"	"21"	"0.0003146"	"0.001476"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"752.44745"	"1503.88762"	"1503.88850"	"-0.59"	"-0.00044"	"7/74"	"7"	"74"	"2411643.20233154"	"HCD"	"MS2"	"14.60692"	"105.0"	"100.000"	"69.8968"	"22933"	"22933"	"22912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.3"	""	"122.1"	""	"134.6"	""	"189.4"	"0.1"	"210.1"	"222.4"	""	"909"	"19"	"36.000"	"29.000"	"0.607482662270358"	"18"	"0.0001889"	"0.0008646"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"501.96741"	"1503.88767"	"1503.88850"	"-0.55"	"-0.00028"	"9/74"	"9"	"74"	"3579605.09814453"	"HCD"	"MS2"	"19.16924"	"57.9"	"100.000"	"68.7571"	"22468"	"22468"	"22442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.5"	""	"67.8"	""	"82.9"	""	"110.0"	""	"110.8"	"114.9"	""	"909"	"23"	"36.000"	"29.000"	"0.224664207235517"	"16"	"0.0001889"	"0.0008317"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"75239.7819824219"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"110.0323"	"36110"	"36110"	"36107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.1"	""	"3.8"	""	"6.8"	""	"4.7"	""	"7.8"	"10.6"	""	"907"	"16"	"36.000"	"29.000"	"1.05093847376071"	"14"	"0.0006037"	"0.004732"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"77496.2266235352"	"HCD"	"MS2"	"6.648573"	"2.8"	"100.000"	"114.5382"	"36811"	"36811"	"36808"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.2"	""	"4.5"	""	"3.1"	""	"5.8"	""	"6.0"	"5.1"	""	"907"	"22"	"36.000"	"29.000"	"0.257974804137682"	"14"	"0.0006037"	"0.004455"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"93448.6536254883"	"HCD"	"MS2"	"6.297073"	"5.4"	"100.000"	"97.2122"	"33387"	"33387"	"33383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"3.6"	""	"7.1"	""	"12.0"	""	"6.5"	"12.4"	""	"907"	"32"	"36.000"	"29.000"	"0.026889163469703"	"24"	"0.0002277"	"0.001219"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"100832.182128906"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"98.5955"	"33778"	"33778"	"33773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"7.0"	""	"8.4"	""	"11.6"	""	"13.9"	"11.9"	""	"907"	"24"	"36.000"	"29.000"	"0.165035468883688"	"16"	"0.000523"	"0.002919"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"108455.809570313"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"92.5327"	"31915"	"31915"	"31912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"5.5"	""	"8.6"	""	"12.8"	""	"11.0"	"13.1"	""	"907"	"27"	"36.000"	"29.000"	"0.0960676774835196"	"20"	"0.0001889"	"0.000771"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"79039.4867553711"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"111.6329"	"36365"	"36365"	"36363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.6"	""	"1.9"	""	"3.5"	""	"5.1"	""	"4.1"	"6.8"	""	"907"	"20"	"36.000"	"29.000"	"0.478164457513436"	"14"	"0.0006037"	"0.003951"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"98792.1259155273"	"HCD"	"MS2"	"11.22763"	"3.9"	"100.000"	"116.3562"	"37117"	"37117"	"37115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"5.5"	""	"4.9"	""	"7.9"	""	"5.6"	"9.8"	""	"907"	"18"	"36.000"	"29.000"	"0.761337622218581"	"14"	"0.000523"	"0.003264"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"4/74"	"4"	"74"	"89518.9818725586"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"109.8588"	"36077"	"36077"	"36075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	"2.4"	""	"6.5"	""	"8.9"	""	"7.7"	"11.6"	""	"907"	"11"	"36.000"	"29.000"	"3.29289051696843"	"13"	"0.00119"	"0.01586"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"99353.6850585938"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"103.4099"	"34925"	"34925"	"34921"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.9"	""	"2.6"	""	"6.5"	""	"13.4"	""	"8.3"	"9.6"	""	"907"	"26"	"36.000"	"29.000"	"0.110046767811988"	"20"	"0.0001889"	"0.001085"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"96304.635559082"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"117.1981"	"37276"	"37276"	"37274"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.8"	""	"4.5"	""	"4.8"	""	"8.2"	""	"10.8"	"9.7"	""	"907"	"19"	"36.000"	"29.000"	"0.518295324827161"	"14"	"0.0006396"	"0.00623"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"4/74"	"4"	"74"	"89434.5992431641"	"HCD"	"MS2"	"7.252557"	"3.4"	"100.000"	"108.2058"	"35793"	"35793"	"35790"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"4.0"	""	"3.5"	""	"5.3"	""	"7.7"	"5.5"	""	"907"	"15"	"36.000"	"29.000"	"1.50167963592355"	"14"	"0.0004166"	"0.002327"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"100219.309448242"	"HCD"	"MS2"	"10.61682"	"3.9"	"100.000"	"115.8439"	"37029"	"37029"	"37027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"5.4"	""	"4.4"	""	"6.5"	""	"7.7"	"7.1"	""	"907"	"9"	"36.000"	"29.000"	"5.1710327865899"	"13"	"0.0008731"	"0.009414"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"101134.96282959"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"104.1921"	"35088"	"35088"	"35084"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.8"	""	"5.4"	""	"5.4"	""	"8.4"	""	"8.9"	"8.1"	""	"907"	"24"	"36.000"	"29.000"	"0.162396734226045"	"19"	"0.0006037"	"0.004724"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"137159.22467041"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"91.0536"	"31446"	"31446"	"31438"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"8.4"	""	"11.4"	""	"15.0"	""	"17.5"	"13.2"	""	"907"	"16"	"36.000"	"29.000"	"1.17375455702193"	"14"	"0.0004166"	"0.002215"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"138283.013061523"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"119.2317"	"37628"	"37628"	"37625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"6.9"	""	"5.9"	""	"11.5"	""	"6.5"	"8.9"	""	"907"	"18"	"36.000"	"29.000"	"0.660050693043921"	"14"	"0.0006037"	"0.005714"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"4/74"	"4"	"74"	"132578.067626953"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"117.9668"	"37410"	"37410"	"37408"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"4.9"	""	"4.4"	""	"9.5"	""	"8.4"	"8.8"	""	"907"	"10"	"36.000"	"29.000"	"4.34087511332212"	"13"	"0.00103"	"0.01179"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"155447.174926758"	"HCD"	"MS2"	"14.07551"	"4.2"	"100.000"	"102.1199"	"34651"	"34651"	"34647"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.9"	""	"5.2"	""	"4.8"	""	"7.1"	""	"7.7"	"11.0"	""	"907"	"25"	"36.000"	"29.000"	"0.136954810520231"	"19"	"0.0006037"	"0.005769"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"7/74"	"7"	"74"	"344189.441467285"	"HCD"	"MS2"	"33.79992"	"18.7"	"100.000"	"82.8569"	"28261"	"28261"	"28237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.3"	""	"22.5"	""	"27.2"	""	"30.5"	""	"31.9"	"40.0"	""	"907"	"15"	"36.000"	"29.000"	"1.5225700805918"	"22"	"0.0001889"	"0.001028"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44751"	"1503.88774"	"1503.88850"	"-0.50"	"-0.00038"	"5/74"	"5"	"74"	"1330755.25634766"	"HCD"	"MS2"	"14.96162"	"65.2"	"100.000"	"70.6973"	"23311"	"23311"	"23290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.3"	""	"72.8"	""	"82.8"	""	"133.5"	""	"129.4"	"117.7"	""	"907"	"30"	"36.000"	"29.000"	"0.0425184370140887"	"25"	"0.0001308"	"0.0002857"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"501.96744"	"1503.88776"	"1503.88850"	"-0.49"	"-0.00025"	"7/74"	"7"	"74"	"1442139.49047852"	"HCD"	"MS2"	"50.63704"	"45.4"	"100.000"	"70.4357"	"23153"	"23153"	"23123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.9"	""	"42.3"	""	"54.3"	""	"91.9"	""	"99.1"	"95.7"	""	"907"	"15"	"36.000"	"29.000"	"1.44736241728819"	"17"	"0.0001889"	"0.0009473"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"501.96747"	"1503.88785"	"1503.88850"	"-0.43"	"-0.00022"	"11/74"	"11"	"74"	"434924581.576172"	"HCD"	"MS2"	"1.856004"	"34.3"	"2.904"	"67.3995"	"21966"	"21966"	"21949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.0"	""	"41.0"	""	"44.9"	""	"71.2"	""	"62.9"	"71.2"	""	"907"	"37"	"36.000"	"29.000"	"0.00884254525990273"	"25"	"0.0008453"	"0.008286"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"4/74"	"4"	"74"	"77608.7915039063"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"104.7181"	"35186"	"35186"	"35182"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"4.7"	""	"6.0"	""	"10.8"	""	"6.9"	"8.1"	""	"907"	"13"	"36.000"	"29.000"	"2.12117886573744"	"14"	"0.00103"	"0.01116"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"5/74"	"5"	"74"	"82784.6430053711"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"105.4488"	"35308"	"35308"	"35305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.7"	""	"5.4"	""	"5.6"	""	"7.6"	""	"8.4"	"7.5"	""	"907"	"14"	"36.000"	"29.000"	"1.97050386661808"	"19"	"0.0003839"	"0.001778"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"5/74"	"5"	"74"	"88283.5026855469"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"104.4514"	"35138"	"35138"	"35136"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"3.8"	""	"4.4"	""	"9.1"	""	"8.5"	"9.1"	""	"907"	"27"	"36.000"	"29.000"	"0.0967335868111972"	"20"	"0.0001889"	"0.0006066"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"4/74"	"4"	"74"	"120788.559020996"	"HCD"	"MS2"	"7.583739"	"3.5"	"100.000"	"111.1001"	"36281"	"36281"	"36278"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"5.1"	""	"4.1"	""	"6.1"	""	"8.5"	"5.0"	""	"907"	"16"	"36.000"	"29.000"	"1.15765004075688"	"19"	"0.001454"	"0.01969"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"5/74"	"5"	"74"	"96723.6887207031"	"HCD"	"MS2"	"18.18162"	"3.4"	"100.000"	"108.4622"	"35839"	"35839"	"35836"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.4"	""	"3.3"	""	"3.8"	""	"9.4"	""	"5.7"	"3.4"	""	"907"	"22"	"36.000"	"29.000"	"0.292804192867216"	"14"	"0.0004557"	"0.002551"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"5/74"	"5"	"74"	"96217.9703979492"	"HCD"	"MS2"	"12.8819"	"3.2"	"100.000"	"109.5909"	"36028"	"36028"	"36026"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.3"	""	"3.4"	""	"2.8"	""	"8.7"	""	"6.3"	"5.3"	""	"907"	"27"	"36.000"	"29.000"	"0.09628913635171"	"20"	"0.0005564"	"0.003361"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"5/74"	"5"	"74"	"121030.855712891"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"118.9774"	"37584"	"37584"	"37581"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"3.6"	""	"5.8"	""	"10.4"	""	"8.4"	"9.2"	""	"907"	"13"	"36.000"	"29.000"	"2.38548830308185"	"13"	"0.0006037"	"0.004733"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"4/74"	"4"	"74"	"103834.818908691"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"111.2021"	"36297"	"36297"	"36293"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.8"	""	"4.9"	""	"2.6"	""	"6.4"	""	"7.2"	"5.0"	""	"907"	"11"	"36.000"	"29.000"	"3.85991100324778"	"13"	"0.005946"	"0.1985"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"5/74"	"5"	"74"	"104579.859008789"	"HCD"	"MS2"	"5.288811"	"4.3"	"100.000"	"103.6646"	"34986"	"34986"	"34982"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"4.5"	""	"7.1"	""	"8.8"	""	"5.4"	"7.0"	""	"907"	"19"	"36.000"	"29.000"	"0.630343518255256"	"18"	"0.0002277"	"0.001271"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"4/74"	"4"	"74"	"117113.670227051"	"HCD"	"MS2"	"6.179867"	"3.7"	"100.000"	"110.4025"	"36166"	"36166"	"36163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.2"	""	"4.2"	""	"6.7"	""	"8.0"	""	"6.6"	"7.5"	""	"907"	"9"	"36.000"	"29.000"	"5.29148161337146"	"13"	"0.006001"	"0.2076"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"5/74"	"5"	"74"	"149604.682250977"	"HCD"	"MS2"	"5.825685"	"5.1"	"100.000"	"100.9569"	"34389"	"34389"	"34385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"7.2"	""	"5.2"	""	"9.3"	""	"8.9"	"12.1"	""	"907"	"18"	"36.000"	"29.000"	"0.664625945873506"	"19"	"0.0004557"	"0.002567"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"5/74"	"5"	"74"	"111388.154785156"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"108.5553"	"35856"	"35856"	"35854"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.2"	""	"5.2"	""	"3.5"	""	"8.5"	""	"7.0"	"9.7"	""	"907"	"25"	"36.000"	"29.000"	"0.15870013324736"	"21"	"0.0003839"	"0.001668"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"4/74"	"4"	"74"	"142752.087646484"	"HCD"	"MS2"	"5.765325"	"4.1"	"100.000"	"115.9088"	"37059"	"37059"	"37056"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.9"	""	"4.9"	""	"7.6"	""	"7.5"	""	"8.0"	"8.0"	""	"907"	"7"	"36.000"	"29.000"	"8.56204076815168"	"13"	"0.007535"	"0.2913"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"4/74"	"4"	"74"	"136860.854858398"	"HCD"	"MS2"	"13.53203"	"4.2"	"100.000"	"118.7255"	"37534"	"37534"	"37531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"4.2"	""	"4.2"	""	"7.7"	""	"9.8"	"9.6"	""	"907"	"8"	"36.000"	"29.000"	"7.97218358930267"	"13"	"0.0009727"	"0.01048"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"5/74"	"5"	"74"	"1079462.85632324"	"HCD"	"MS2"	"15.59493"	"62.1"	"100.000"	"71.0222"	"23444"	"23444"	"23418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.3"	""	"71.9"	""	"84.8"	""	"114.8"	""	"117.7"	"121.9"	""	"907"	"30"	"36.000"	"29.000"	"0.0429118552679387"	"25"	"0.0001308"	"0.0002437"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44757"	"1503.88786"	"1503.88850"	"-0.42"	"-0.00032"	"5/74"	"5"	"74"	"1971823.94647217"	"HCD"	"MS2"	"17.35106"	"97.6"	"100.000"	"70.0648"	"23053"	"23053"	"23034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.7"	""	"128.4"	""	"133.2"	""	"167.6"	""	"175.6"	"197.5"	""	"907"	"30"	"36.000"	"29.000"	"0.0465133148555013"	"24"	"0.0001308"	"0.0002484"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"5/74"	"5"	"74"	"104544.188110352"	"HCD"	"MS2"	"9.867191"	"6.0"	"100.000"	"90.1994"	"31145"	"31145"	"31136"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"5.9"	""	"5.8"	""	"13.8"	""	"11.8"	"12.4"	""	"907"	"30"	"36.000"	"29.000"	"0.0420317324902535"	"25"	"0.0001308"	"0.0002922"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"4/74"	"4"	"74"	"76664.5385131836"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"105.8557"	"35379"	"35379"	"35377"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.1"	""	"3.3"	""	"4.4"	""	"9.6"	""	"6.2"	"8.6"	""	"907"	"19"	"36.000"	"29.000"	"0.547743574220925"	"23"	"0.000523"	"0.002975"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"5/74"	"5"	"74"	"89163.490234375"	"HCD"	"MS2"	"11.79376"	"3.7"	"100.000"	"106.9977"	"35580"	"35580"	"35578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	"4.1"	""	"4.2"	""	"8.9"	""	"8.5"	"6.1"	""	"907"	"28"	"36.000"	"29.000"	"0.0649497212320552"	"21"	"0.0001889"	"0.001095"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"5/74"	"5"	"74"	"113335.674682617"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"92.2799"	"31838"	"31838"	"31835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.1"	""	"7.1"	""	"11.0"	""	"13.7"	""	"15.4"	"11.5"	""	"907"	"27"	"36.000"	"29.000"	"0.0830954590545344"	"23"	"0.0001889"	"0.0008653"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"5/74"	"5"	"74"	"93334.7230834961"	"HCD"	"MS2"	"5.309818"	"4.7"	"100.000"	"102.0114"	"34624"	"34624"	"34619"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"4.0"	""	"7.5"	""	"8.9"	""	"11.5"	"8.7"	""	"907"	"28"	"36.000"	"29.000"	"0.0749164675496858"	"20"	"0.0002277"	"0.00132"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"5/74"	"5"	"74"	"120187.550354004"	"HCD"	"MS2"	"6.979005"	"6.6"	"100.000"	"91.9942"	"31738"	"31738"	"31734"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.2"	""	"7.3"	""	"10.6"	""	"13.2"	""	"10.1"	"12.9"	""	"907"	"22"	"36.000"	"29.000"	"0.261563591148386"	"15"	"0.000523"	"0.002811"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"5/74"	"5"	"74"	"99351.2493286133"	"HCD"	"MS2"	"8.80539"	"4.0"	"100.000"	"110.6745"	"36211"	"36211"	"36207"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.4"	""	"2.2"	""	"5.0"	""	"9.6"	""	"9.0"	"10.5"	""	"907"	"32"	"36.000"	"29.000"	"0.0312303816392129"	"23"	"0.0004166"	"0.002229"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"4/74"	"4"	"74"	"123420.895385742"	"HCD"	"MS2"	"19.44588"	"6.4"	"100.000"	"89.2638"	"30796"	"30796"	"30788"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"5.4"	""	"7.6"	""	"16.0"	""	"15.3"	"12.1"	""	"907"	"15"	"36.000"	"29.000"	"1.3758696520321"	"19"	"0.0006037"	"0.004493"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"5/74"	"5"	"74"	"108626.371643066"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"117.4544"	"37320"	"37320"	"37318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.4"	""	"5.2"	""	"5.5"	""	"6.3"	""	"9.5"	"9.0"	""	"907"	"18"	"36.000"	"29.000"	"0.699161155412625"	"14"	"0.0005564"	"0.003318"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"4/74"	"4"	"74"	"106983.249450684"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"111.9240"	"36410"	"36410"	"36407"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	"2.0"	""	"3.5"	""	"5.7"	""	"8.9"	"6.1"	""	"907"	"10"	"36.000"	"29.000"	"4.92694020310339"	"13"	"0.003107"	"0.06005"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"5/74"	"5"	"74"	"170084.910400391"	"HCD"	"MS2"	"7.407424"	"6.9"	"100.000"	"95.2624"	"32833"	"32833"	"32829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.6"	""	"8.2"	""	"9.7"	""	"12.7"	"1.7"	"15.9"	"10.2"	""	"907"	"31"	"36.000"	"29.000"	"0.033157157435973"	"20"	"0.0002277"	"0.001178"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.44763"	"1503.88799"	"1503.88850"	"-0.34"	"-0.00026"	"5/74"	"5"	"74"	"190130.838256836"	"HCD"	"MS2"	"12.18761"	"6.3"	"100.000"	"95.9316"	"32997"	"32997"	"32992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.3"	""	"10.4"	""	"7.8"	""	"15.4"	""	"12.5"	"11.5"	""	"907"	"25"	"36.000"	"29.000"	"0.131394531702255"	"19"	"0.0002277"	"0.00117"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"501.96753"	"1503.88803"	"1503.88850"	"-0.31"	"-0.00016"	"11/74"	"11"	"74"	"4340989.96704102"	"HCD"	"MS2"	"8.043513"	"42.7"	"100.000"	"68.3477"	"22352"	"22352"	"22330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.0"	""	"40.9"	""	"55.3"	""	"93.0"	""	"93.3"	"84.3"	""	"855"	"38"	"36.000"	"29.000"	"0.00622208756948791"	"25"	"0.0001889"	"0.0006175"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"3/74"	"3"	"74"	"64884.0961914063"	"HCD"	"MS2"	"10.48587"	"3.1"	"100.000"	"114.3722"	"36802"	"36802"	"36799"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.2"	""	""	""	"6.4"	""	"9.2"	""	"5.8"	"5.4"	""	"849"	"6"	"36.000"	"29.000"	"9.56924545558706"	"13"	"0.003197"	"0.06489"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"5/74"	"5"	"74"	"87515.4576416016"	"HCD"	"MS2"	"8.235008"	"3.9"	"100.000"	"105.5994"	"35337"	"35337"	"35334"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.5"	""	"4.6"	""	"6.0"	""	"8.0"	""	"9.0"	"5.6"	""	"849"	"29"	"36.000"	"29.000"	"0.0541848274340415"	"22"	"0.0003839"	"0.001573"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"3"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"3/74"	"3"	"74"	"75738.434387207"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"112.2850"	"36469"	"36469"	"36467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"4.2"	""	"3.0"	""	"7.1"	""	"7.2"	"9.4"	""	"849"	"0"	"36.000"	"29.000"	"41.2931196493322"	"13"	"0.009767"	"0.4417"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"5/74"	"5"	"74"	"92951.7160644531"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"103.1525"	"34869"	"34869"	"34866"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"4.8"	""	"4.7"	""	"7.3"	""	"5.8"	"10.0"	""	"849"	"31"	"36.000"	"29.000"	"0.0376597727110114"	"25"	"0.0001889"	"0.0007661"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"5/74"	"5"	"74"	"82192.0367431641"	"HCD"	"MS2"	"7.061768"	"2.8"	"100.000"	"113.5980"	"36676"	"36676"	"36674"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"3.4"	""	"2.6"	""	"6.6"	""	"5.9"	"8.4"	""	"849"	"18"	"36.000"	"29.000"	"0.626437423375617"	"14"	"0.002393"	"0.03542"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"5/74"	"5"	"74"	"120063.931274414"	"HCD"	"MS2"	"17.76983"	"7.1"	"100.000"	"91.4136"	"31540"	"31540"	"31534"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"10.7"	""	"8.3"	""	"13.2"	""	"15.5"	"13.4"	""	"849"	"22"	"36.000"	"29.000"	"0.289652775663139"	"22"	"0.0001889"	"0.001088"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"5/74"	"5"	"74"	"96887.4352416992"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"108.9718"	"35930"	"35930"	"35927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"4.0"	""	"3.1"	""	"6.4"	""	"5.4"	"5.9"	""	"849"	"22"	"36.000"	"29.000"	"0.248815650836205"	"18"	"0.000523"	"0.003143"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"4/74"	"4"	"74"	"97523.1799926758"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"114.6279"	"36842"	"36842"	"36839"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.9"	""	"1.9"	""	"2.4"	""	"6.9"	""	"8.9"	"7.1"	""	"849"	"13"	"36.000"	"29.000"	"2.38164865825784"	"13"	"0.0005564"	"0.003386"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"3"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"5/74"	"5"	"74"	"133986.965454102"	"HCD"	"MS2"	"5.428581"	"6.4"	"100.000"	"93.4262"	"32202"	"32202"	"32198"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.5"	""	"9.6"	""	"5.7"	""	"13.0"	""	"13.0"	"13.0"	""	"849"	"19"	"36.000"	"29.000"	"0.599622187692359"	"22"	"0.0001889"	"0.0004551"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"5/74"	"5"	"74"	"208558.331359863"	"HCD"	"MS2"	"30.10253"	"13.7"	"100.000"	"84.9401"	"29110"	"29110"	"29090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.2"	""	"16.4"	""	"19.5"	""	"27.1"	""	"22.0"	"27.8"	""	"849"	"29"	"36.000"	"29.000"	"0.0480703954193494"	"24"	"0.0001889"	"0.0005709"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44769"	"1503.88811"	"1503.88850"	"-0.26"	"-0.00020"	"5/74"	"5"	"74"	"115853.207885742"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"118.2201"	"37450"	"37450"	"37448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.0"	""	"2.4"	""	"4.7"	""	"7.9"	""	"5.9"	"11.7"	""	"849"	"19"	"36.000"	"29.000"	"0.583280818392812"	"14"	"0.0006037"	"0.005748"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"501.96756"	"1503.88813"	"1503.88850"	"-0.25"	"-0.00012"	"11/74"	"11"	"74"	"42775504.9742432"	"HCD"	"MS2"	"24.22365"	"154.0"	"100.000"	"66.9163"	"21724"	"21724"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.1"	""	"173.7"	""	"220.3"	""	"298.7"	""	"297.0"	"285.1"	""	"849"	"42"	"36.000"	"29.000"	"0.00282408454807639"	"27"	"0.0003839"	"0.001608"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"501.96759"	"1503.88822"	"1503.88850"	"-0.19"	"-0.00009"	"9/74"	"9"	"74"	"1490985.53912354"	"HCD"	"MS2"	"33.11373"	"37.1"	"100.000"	"69.7340"	"22867"	"22867"	"22842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.1"	""	"40.4"	""	"48.4"	""	"75.3"	""	"80.3"	"73.2"	""	"849"	"23"	"36.000"	"29.000"	"0.238713892543303"	"22"	"0.0001889"	"0.0004286"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"752.44775"	"1503.88823"	"1503.88850"	"-0.18"	"-0.00013"	"4/74"	"4"	"74"	"66081.7727050781"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"108.7143"	"35887"	"35887"	"35884"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.9"	""	"4.1"	""	"4.6"	""	"6.7"	""	"5.6"	"5.0"	""	"849"	"12"	"36.000"	"29.000"	"2.89652775663139"	"14"	"0.00162"	"0.02252"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"752.44775"	"1503.88823"	"1503.88850"	"-0.18"	"-0.00013"	"5/74"	"5"	"74"	"64986.3452148438"	"HCD"	"MS2"	"13.56816"	"3.1"	"100.000"	"113.0831"	"36595"	"36595"	"36593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	"3.6"	""	"2.9"	""	"5.9"	""	"7.2"	"6.3"	""	"849"	"24"	"36.000"	"29.000"	"0.169776546273586"	"15"	"0.0006037"	"0.005874"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"752.44775"	"1503.88823"	"1503.88850"	"-0.18"	"-0.00013"	"5/74"	"5"	"74"	"102561.414428711"	"HCD"	"MS2"	"6.229781"	"5.5"	"100.000"	"100.4304"	"34250"	"34250"	"34248"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"3.2"	""	"9.9"	""	"13.6"	""	"9.2"	"10.6"	""	"849"	"25"	"36.000"	"29.000"	"0.124703227725767"	"19"	"0.0004166"	"0.002441"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"752.44775"	"1503.88823"	"1503.88850"	"-0.18"	"-0.00013"	"5/74"	"5"	"74"	"82825.1411132813"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"104.4230"	"35132"	"35132"	"35130"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.4"	""	"3.9"	""	"5.3"	""	"7.0"	""	"9.8"	"11.2"	""	"849"	"25"	"36.000"	"29.000"	"0.134548138806196"	"20"	"0.0002277"	"0.001294"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"752.44775"	"1503.88823"	"1503.88850"	"-0.18"	"-0.00013"	"5/74"	"5"	"74"	"133432.242126465"	"HCD"	"MS2"	"22.00694"	"7.1"	"100.000"	"93.9011"	"32382"	"32382"	"32378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"5.8"	""	"9.6"	""	"15.7"	""	"15.1"	"13.0"	""	"849"	"27"	"36.000"	"29.000"	"0.0941624380205193"	"22"	"0.0001889"	"0.001034"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"752.44775"	"1503.88823"	"1503.88850"	"-0.18"	"-0.00013"	"5/74"	"5"	"74"	"128641.696777344"	"HCD"	"MS2"	"19.33469"	"6.9"	"100.000"	"91.1426"	"31449"	"31449"	"31442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"6.7"	""	"8.4"	""	"13.3"	""	"15.3"	"15.0"	""	"849"	"32"	"36.000"	"29.000"	"0.0242592681267207"	"26"	"0.0001859"	"0.0003377"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"752.44775"	"1503.88823"	"1503.88850"	"-0.18"	"-0.00013"	"5/74"	"5"	"74"	"1716143.98913574"	"HCD"	"MS2"	"22.89364"	"79.6"	"100.000"	"70.5327"	"23192"	"23192"	"23171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.8"	""	"93.9"	""	"97.7"	""	"153.3"	"1.7"	"167.9"	"152.8"	""	"849"	"27"	"36.000"	"29.000"	"0.080700772982744"	"23"	"0.0001859"	"0.0003472"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"752.44775"	"1503.88823"	"1503.88850"	"-0.18"	"-0.00013"	"5/74"	"5"	"74"	"10619143.4434204"	"HCD"	"MS2"	"0"	"322.2"	"81.730"	"68.1853"	"22235"	"22235"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.6"	""	"367.0"	""	"425.2"	""	"626.1"	""	"638.9"	"656.2"	""	"849"	"31"	"36.000"	"29.000"	"0.0345841968566846"	"25"	"7.476E-05"	"0.0002037"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"752.44775"	"1503.88823"	"1503.88850"	"-0.18"	"-0.00013"	"7/74"	"7"	"74"	"5093308.86499023"	"HCD"	"MS2"	"30.02613"	"162.8"	"100.000"	"69.4450"	"22800"	"22800"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.5"	""	"195.7"	""	"205.3"	""	"267.2"	"3.1"	"344.9"	"336.8"	""	"849"	"11"	"36.000"	"29.000"	"3.35643077585926"	"19"	"0.005792"	"0.1879"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7045"	"0.0000"	"1"	"1"	"1"	"501.96762"	"1503.88831"	"1503.88850"	"-0.13"	"-0.00006"	"11/74"	"11"	"74"	"4217996.01324463"	"HCD"	"MS2"	"7.993727"	"43.5"	"100.000"	"68.4342"	"22336"	"22336"	"22314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.1"	""	"50.8"	""	"51.1"	""	"91.7"	""	"84.6"	"89.7"	""	"849"	"44"	"36.000"	"29.000"	"0.00181083005731276"	"28"	"0.0001889"	"0.0004025"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44781"	"1503.88835"	"1503.88850"	"-0.10"	"-0.00007"	"5/74"	"5"	"74"	"83421.5076904297"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"109.3320"	"35983"	"35983"	"35981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"4.6"	""	"3.3"	""	"8.2"	""	"6.0"	"9.2"	""	"849"	"19"	"36.000"	"29.000"	"0.58462541954548"	"14"	"0.0006037"	"0.004541"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"752.44781"	"1503.88835"	"1503.88850"	"-0.10"	"-0.00007"	"5/74"	"5"	"74"	"74306.393371582"	"HCD"	"MS2"	"15.63867"	"3.6"	"100.000"	"107.5038"	"35671"	"35671"	"35669"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.2"	""	"3.7"	""	"8.6"	""	"7.1"	""	"7.9"	"5.2"	""	"849"	"25"	"36.000"	"29.000"	"0.127607939046568"	"16"	"0.0004166"	"0.002158"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.44781"	"1503.88835"	"1503.88850"	"-0.10"	"-0.00007"	"5/74"	"5"	"74"	"119062.150146484"	"HCD"	"MS2"	"10.42677"	"5.9"	"100.000"	"98.0716"	"33632"	"33632"	"33629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"6.8"	""	"7.2"	""	"9.3"	""	"12.0"	"15.5"	""	"849"	"25"	"36.000"	"29.000"	"0.135480781949027"	"19"	"0.0002277"	"0.001328"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44781"	"1503.88835"	"1503.88850"	"-0.10"	"-0.00007"	"4/74"	"4"	"74"	"108788.321228027"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"116.8755"	"37206"	"37206"	"37203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"3.2"	""	"3.3"	""	"5.9"	""	"9.1"	"8.1"	""	"849"	"12"	"36.000"	"29.000"	"2.89652775663139"	"17"	"0.00103"	"0.01305"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"752.44781"	"1503.88835"	"1503.88850"	"-0.10"	"-0.00007"	"5/74"	"5"	"74"	"319730.902160645"	"HCD"	"MS2"	"17.78458"	"21.0"	"100.000"	"82.7975"	"28186"	"28186"	"28160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.2"	""	"27.7"	""	"28.3"	""	"39.8"	""	"40.4"	"39.1"	""	"849"	"26"	"36.000"	"29.000"	"0.109616945092439"	"21"	"0.0001889"	"0.0007254"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"752.44781"	"1503.88835"	"1503.88850"	"-0.10"	"-0.00007"	"5/74"	"5"	"74"	"661381.77355957"	"HCD"	"MS2"	"16.18233"	"38.5"	"100.000"	"73.4155"	"24421"	"24421"	"24399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.0"	""	"47.8"	""	"47.7"	""	"75.8"	""	"67.7"	"80.7"	""	"849"	"27"	"36.000"	"29.000"	"0.0808868074775398"	"23"	"0.0001889"	"0.0005191"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"752.44781"	"1503.88835"	"1503.88850"	"-0.10"	"-0.00007"	"7/74"	"7"	"74"	"3174706.12957764"	"HCD"	"MS2"	"18.20146"	"126.8"	"100.000"	"69.5296"	"22783"	"22783"	"22762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.9"	""	"143.2"	""	"161.7"	""	"230.2"	"0.4"	"263.3"	"257.2"	""	"849"	"19"	"36.000"	"29.000"	"0.527081404572978"	"19"	"0.0002277"	"0.00125"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"73678.2408447266"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"114.1138"	"36756"	"36756"	"36754"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"3.9"	""	"6.6"	""	"6.7"	""	"10.3"	"5.4"	""	"849"	"18"	"36.000"	"29.000"	"0.607963763241619"	"14"	"0.0006396"	"0.006221"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"108133.578430176"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"94.2835"	"32502"	"32502"	"32497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.8"	""	"11.9"	""	"10.3"	""	"14.7"	""	"14.9"	"10.8"	""	"849"	"27"	"36.000"	"29.000"	"0.0899244301912989"	"20"	"0.0002277"	"0.001225"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"103777.420471191"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"99.3878"	"34002"	"34002"	"33998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.6"	""	"6.5"	""	"8.3"	""	"12.5"	""	"13.7"	"13.4"	""	"849"	"30"	"36.000"	"29.000"	"0.0422549599665723"	"25"	"0.0001889"	"0.0005167"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"85979.9094238281"	"HCD"	"MS2"	"19.12036"	"4.2"	"100.000"	"107.7846"	"35715"	"35715"	"35713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.1"	""	"6.6"	""	"4.8"	""	"8.5"	""	"10.4"	"8.1"	""	"849"	"22"	"36.000"	"29.000"	"0.282408454807639"	"19"	"0.0002277"	"0.00134"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"4/74"	"4"	"74"	"88077.2626953125"	"HCD"	"MS2"	"6.10102"	"4.1"	"100.000"	"103.8847"	"35024"	"35024"	"35022"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.0"	""	"2.2"	""	"4.3"	""	"10.8"	""	"4.0"	"12.5"	""	"849"	"15"	"36.000"	"29.000"	"1.33007978997197"	"14"	"0.001846"	"0.02599"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"82735.5439453125"	"HCD"	"MS2"	"8.116991"	"3.7"	"100.000"	"104.6817"	"35180"	"35180"	"35178"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"6.5"	""	"1.5"	""	"8.2"	""	"7.9"	"7.3"	""	"849"	"7"	"36.000"	"29.000"	"8.88950737508704"	"13"	"0.0006737"	"0.006451"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"91804.6454467773"	"HCD"	"MS2"	"9.392126"	"3.1"	"100.000"	"116.1004"	"37074"	"37074"	"37072"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"4.5"	""	"5.1"	""	"6.3"	""	"7.8"	"5.7"	""	"849"	"23"	"36.000"	"29.000"	"0.213736008430466"	"14"	"0.00119"	"0.01575"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"82880.0424194336"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"110.8180"	"36236"	"36236"	"36232"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.8"	""	"6.5"	""	"3.2"	""	"7.0"	""	"5.5"	"5.4"	""	"849"	"29"	"36.000"	"29.000"	"0.0524659685497195"	"22"	"0.0002277"	"0.001147"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"121192.871643066"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"92.8669"	"32026"	"32026"	"32021"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"5.9"	""	"6.8"	""	"11.2"	""	"13.7"	"13.2"	""	"849"	"25"	"36.000"	"29.000"	"0.141539512217993"	"19"	"0.0004166"	"0.002381"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"115099.701721191"	"HCD"	"MS2"	"9.88456"	"3.7"	"100.000"	"117.7118"	"37364"	"37364"	"37362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.1"	""	"2.8"	""	"4.2"	""	"6.3"	""	"10.1"	"7.3"	""	"849"	"20"	"36.000"	"29.000"	"0.444506068647607"	"14"	"0.00103"	"0.01297"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"129933.972717285"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"103.5932"	"34969"	"34969"	"34966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.4"	""	"3.5"	""	"5.4"	""	"7.3"	""	"7.6"	"6.6"	""	"849"	"23"	"36.000"	"29.000"	"0.219724100163016"	"14"	"0.000523"	"0.002806"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"4/74"	"4"	"74"	"112570.663208008"	"HCD"	"MS2"	"10.04016"	"4.0"	"100.000"	"114.8868"	"36884"	"36884"	"36881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.0"	""	"2.4"	""	"3.5"	""	"13.1"	""	"7.7"	"7.5"	""	"849"	"7"	"36.000"	"29.000"	"7.58363975524695"	"13"	"0.00132"	"0.01903"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"148049.542602539"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"100.3724"	"34263"	"34263"	"34260"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"6.9"	""	"7.0"	""	"11.8"	""	"9.6"	"11.9"	""	"849"	"27"	"36.000"	"29.000"	"0.085089837561651"	"19"	"0.0003839"	"0.001866"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"4/74"	"4"	"74"	"129322.006652832"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"119.4716"	"37654"	"37654"	"37650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"3.0"	""	"3.5"	""	"7.9"	""	"8.3"	"8.8"	""	"849"	"7"	"36.000"	"29.000"	"8.72725557995268"	"13"	"0.003415"	"0.07723"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"752.44788"	"1503.88848"	"1503.88850"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"156264.539123535"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"111.4618"	"36339"	"36339"	"36335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	"5.4"	""	"3.6"	""	"7.3"	""	"8.5"	"7.5"	""	"849"	"26"	"36.000"	"29.000"	"0.111912267328287"	"19"	"0.0008125"	"0.007804"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"501.96768"	"1503.88849"	"1503.88850"	"-0.01"	"0.00000"	"10/74"	"10"	"74"	"2307558.32623291"	"HCD"	"MS2"	"30.71947"	"43.9"	"100.000"	"69.3752"	"22720"	"22720"	"22698"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.9"	""	"50.3"	""	"50.8"	""	"81.6"	"1.7"	"96.5"	"87.3"	""	"849"	"32"	"36.000"	"29.000"	"0.0248243390719332"	"26"	"0.0001889"	"0.0006192"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44794"	"1503.88860"	"1503.88850"	"0.06"	"0.00005"	"5/74"	"5"	"74"	"67285.9957885742"	"HCD"	"MS2"	"8.751046"	"3.1"	"100.000"	"113.8577"	"36716"	"36716"	"36714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"1.8"	""	"3.6"	""	"6.8"	""	"3.7"	"9.5"	""	"849"	"15"	"36.000"	"29.000"	"1.3209235851015"	"13"	"0.0004166"	"0.002201"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44794"	"1503.88860"	"1503.88850"	"0.06"	"0.00005"	"5/74"	"5"	"74"	"73589.8231811523"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"112.5622"	"36511"	"36511"	"36509"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.4"	""	"6.4"	""	"7.3"	""	"3.9"	""	"5.8"	"5.5"	""	"849"	"22"	"36.000"	"29.000"	"0.245967481633211"	"14"	"0.001966"	"0.02882"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44794"	"1503.88860"	"1503.88850"	"0.06"	"0.00005"	"4/74"	"4"	"74"	"121538.311645508"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"116.1681"	"37102"	"37102"	"37099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.9"	""	"5.3"	""	"4.6"	""	"6.4"	""	"7.7"	"12.5"	""	"849"	"15"	"36.000"	"29.000"	"1.33007978997197"	"13"	"0.0008731"	"0.00896"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"752.44794"	"1503.88860"	"1503.88850"	"0.06"	"0.00005"	"5/74"	"5"	"74"	"131334.671386719"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"111.3682"	"36323"	"36323"	"36318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	"3.3"	""	"5.8"	""	"6.9"	""	"6.7"	"9.9"	""	"849"	"28"	"36.000"	"29.000"	"0.0683719072133176"	"21"	"0.000494"	"0.002702"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"752.44794"	"1503.88860"	"1503.88850"	"0.06"	"0.00005"	"5/74"	"5"	"74"	"269429.334289551"	"HCD"	"MS2"	"42.17742"	"17.5"	"100.000"	"81.6543"	"27771"	"27771"	"27742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.4"	""	"21.7"	""	"24.1"	""	"33.1"	""	"35.8"	"31.9"	""	"849"	"27"	"36.000"	"29.000"	"0.0862735551142426"	"22"	"0.0001889"	"0.0004758"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"752.44794"	"1503.88860"	"1503.88850"	"0.06"	"0.00005"	"5/74"	"5"	"74"	"511406.204833984"	"HCD"	"MS2"	"68.29094"	"29.4"	"100.000"	"80.8284"	"27383"	"27383"	"27360"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.9"	""	"37.8"	""	"42.6"	""	"48.4"	"0.2"	"51.5"	"58.5"	""	"849"	"6"	"36.000"	"29.000"	"9.56924545558706"	"19"	"0.0003146"	"0.001461"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44794"	"1503.88860"	"1503.88850"	"0.06"	"0.00005"	"5/74"	"5"	"74"	"5126791.12469482"	"HCD"	"MS2"	"8.262424"	"225.6"	"100.000"	"69.1179"	"22667"	"22667"	"22650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.5"	""	"226.0"	""	"281.6"	""	"362.7"	"4.3"	"617.3"	"407.9"	""	"849"	"30"	"36.000"	"29.000"	"0.0403531734907091"	"25"	"0.0001889"	"0.0004263"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7250"	"0.0000"	"1"	"1"	"1"	"501.96774"	"1503.88868"	"1503.88850"	"0.12"	"0.00006"	"11/74"	"11"	"74"	"9448432.67913818"	"HCD"	"MS2"	"7.5214"	"53.0"	"100.000"	"68.0201"	"22219"	"22219"	"22202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.2"	""	"61.2"	""	"67.2"	""	"102.9"	""	"118.8"	"103.8"	""	"849"	"40"	"36.000"	"29.000"	"0.00416752001811983"	"26"	"0.0001889"	"0.0006267"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"752.44800"	"1503.88872"	"1503.88850"	"0.15"	"0.00011"	"5/74"	"5"	"74"	"81517.6103515625"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"104.9415"	"35226"	"35226"	"35223"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"6.1"	""	"7.2"	""	"10.7"	""	"8.5"	"9.9"	""	"849"	"27"	"36.000"	"29.000"	"0.095033712332226"	"20"	"0.0003839"	"0.001784"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44800"	"1503.88872"	"1503.88850"	"0.15"	"0.00011"	"4/74"	"4"	"74"	"79731.434387207"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"112.8286"	"36553"	"36553"	"36551"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"4.8"	""	"4.3"	""	"6.1"	""	"6.2"	"11.2"	""	"849"	"12"	"36.000"	"29.000"	"2.97767774179278"	"13"	"0.002711"	"0.04175"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"752.44800"	"1503.88872"	"1503.88850"	"0.15"	"0.00011"	"5/74"	"5"	"74"	"102078.663146973"	"HCD"	"MS2"	"5.005755"	"5.4"	"100.000"	"95.4149"	"32851"	"32851"	"32846"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	""	"5.6"	""	"6.6"	""	"11.2"	""	"10.2"	"10.1"	""	"849"	"30"	"36.000"	"29.000"	"0.042060816060698"	"21"	"0.0004557"	"0.002592"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"752.44800"	"1503.88872"	"1503.88850"	"0.15"	"0.00011"	"5/74"	"5"	"74"	"124129.444091797"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"90.8605"	"31348"	"31348"	"31338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.7"	""	"8.3"	""	"11.4"	""	"14.1"	""	"13.7"	"12.9"	""	"849"	"26"	"36.000"	"29.000"	"0.118543486060525"	"20"	"0.0003571"	"0.001523"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44800"	"1503.88872"	"1503.88850"	"0.15"	"0.00011"	"5/74"	"5"	"74"	"136253.018188477"	"HCD"	"MS2"	"14.73675"	"4.9"	"100.000"	"119.7472"	"37718"	"37718"	"37715"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.7"	""	"6.1"	""	"5.0"	""	"8.4"	""	"10.8"	"11.8"	""	"849"	"19"	"36.000"	"29.000"	"0.596867173993148"	"14"	"0.0006037"	"0.00504"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"752.44800"	"1503.88872"	"1503.88850"	"0.15"	"0.00011"	"5/74"	"5"	"74"	"159583.679138184"	"HCD"	"MS2"	"5.961834"	"5.0"	"100.000"	"100.6336"	"34318"	"34318"	"34313"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"3.9"	""	"9.3"	""	"11.2"	""	"9.3"	"10.2"	""	"849"	"26"	"36.000"	"29.000"	"0.101129461474276"	"20"	"0.0006037"	"0.003766"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"752.44800"	"1503.88872"	"1503.88850"	"0.15"	"0.00011"	"5/74"	"5"	"74"	"6386243.79083252"	"HCD"	"MS2"	"2.810113"	"279.2"	"100.000"	"69.2047"	"22651"	"22651"	"22634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"291.8"	""	"305.2"	""	"391.5"	""	"407.1"	""	"747.1"	"517.5"	""	"849"	"19"	"36.000"	"29.000"	"0.502201140405332"	"17"	"0.0001889"	"0.001025"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"97460.9976806641"	"HCD"	"MS2"	"8.183946"	"4.4"	"100.000"	"103.0673"	"34848"	"34848"	"34844"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.1"	""	"5.2"	""	"4.9"	""	"8.5"	""	"10.2"	"10.0"	""	"849"	"27"	"36.000"	"29.000"	"0.0926568847577354"	"21"	"0.0001889"	"0.001094"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"90776.653137207"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"98.9998"	"33891"	"33891"	"33886"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.4"	""	"7.6"	""	"4.5"	""	"8.9"	""	"8.8"	"11.1"	""	"849"	"24"	"36.000"	"29.000"	"0.170953381071157"	"15"	"0.0003839"	"0.001601"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"95438.2807006836"	"HCD"	"MS2"	"23.678"	"4.0"	"100.000"	"108.0361"	"35761"	"35761"	"35759"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.1"	""	"3.6"	""	"7.2"	""	"7.6"	""	"9.3"	"8.6"	""	"849"	"25"	"36.000"	"29.000"	"0.141865794491085"	"19"	"0.0004166"	"0.002458"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"119449.992675781"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"97.6767"	"33522"	"33522"	"33518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.9"	""	"4.0"	""	"7.4"	""	"11.7"	""	"13.4"	"9.9"	""	"849"	"28"	"36.000"	"29.000"	"0.0741101503914754"	"23"	"0.0001889"	"0.0005154"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"114479.909301758"	"HCD"	"MS2"	"7.644663"	"5.9"	"100.000"	"89.0118"	"30663"	"30663"	"30654"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"7.8"	""	"6.1"	""	"11.7"	""	"7.7"	"14.9"	""	"849"	"30"	"36.000"	"29.000"	"0.0444506068647607"	"24"	"0.0001889"	"0.000605"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"109881.233764648"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"101.4661"	"34495"	"34495"	"34491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"7.3"	""	"6.6"	""	"10.4"	""	"12.3"	"12.0"	""	"849"	"24"	"36.000"	"29.000"	"0.158809944721487"	"19"	"0.0001889"	"0.0006559"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"99731.8935546875"	"HCD"	"MS2"	"21.68237"	"4.4"	"100.000"	"106.4817"	"35486"	"35486"	"35483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"9.4"	""	"4.8"	""	"7.6"	""	"8.6"	"6.7"	""	"849"	"25"	"36.000"	"29.000"	"0.148551723403538"	"19"	"0.0002277"	"0.001283"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"168805.786743164"	"HCD"	"MS2"	"45.03458"	"8.4"	"100.000"	"99.9218"	"34136"	"34136"	"34134"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"6.9"	""	"10.2"	""	"20.4"	""	"19.0"	"17.2"	""	"849"	"8"	"36.000"	"29.000"	"7.29252110348396"	"13"	"0.0008731"	"0.009555"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"108328.360656738"	"HCD"	"MS2"	"5.667"	"4.1"	"100.000"	"107.2520"	"35626"	"35626"	"35624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	"5.3"	""	"5.6"	""	"9.0"	""	"7.6"	"7.0"	""	"849"	"15"	"36.000"	"29.000"	"1.37682167564799"	"13"	"0.0003839"	"0.001804"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"130314.45916748"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"100.6995"	"34322"	"34322"	"34319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.2"	""	"6.0"	""	"7.5"	""	"6.3"	""	"11.0"	"11.7"	""	"849"	"16"	"36.000"	"29.000"	"0.992836407810896"	"14"	"0.0007076"	"0.007164"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44806"	"1503.88884"	"1503.88850"	"0.23"	"0.00017"	"5/74"	"5"	"74"	"145519.062988281"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"97.9436"	"33595"	"33595"	"33592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"5.9"	""	"9.8"	""	"13.7"	""	"14.1"	"11.9"	""	"849"	"19"	"36.000"	"29.000"	"0.512716973002828"	"14"	"0.00274"	"0.04356"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"752.44812"	"1503.88896"	"1503.88850"	"0.31"	"0.00023"	"5/74"	"5"	"74"	"78383.6133422852"	"HCD"	"MS2"	"6.744402"	"4.1"	"100.000"	"105.7055"	"35349"	"35349"	"35346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.2"	""	"6.6"	""	"5.9"	""	"7.3"	""	"9.0"	"8.0"	""	"846"	"26"	"36.000"	"29.000"	"0.104794953037888"	"20"	"0.000523"	"0.003024"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"752.44812"	"1503.88896"	"1503.88850"	"0.31"	"0.00023"	"5/74"	"5"	"74"	"89082.8263549805"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"102.5294"	"34736"	"34736"	"34733"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"1.5"	""	"7.5"	""	"8.4"	""	"5.9"	"11.2"	""	"846"	"25"	"36.000"	"29.000"	"0.124549035109688"	"20"	"0.0001889"	"0.0007566"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44812"	"1503.88896"	"1503.88850"	"0.31"	"0.00023"	"5/74"	"5"	"74"	"94232.4661254883"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"106.2288"	"35440"	"35440"	"35438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.5"	""	"3.9"	""	"3.8"	""	"8.1"	""	"6.4"	"7.8"	""	"846"	"14"	"36.000"	"29.000"	"1.83375101557925"	"13"	"0.0003839"	"0.001552"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44812"	"1503.88896"	"1503.88850"	"0.31"	"0.00023"	"4/74"	"4"	"74"	"108620.856323242"	"HCD"	"MS2"	"8.405497"	"3.8"	"100.000"	"118.4711"	"37492"	"37492"	"37489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"4.3"	""	"5.8"	""	"5.7"	""	"9.5"	"7.2"	""	"846"	"10"	"36.000"	"29.000"	"4.70262520640113"	"13"	"0.005603"	"0.1814"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"752.44812"	"1503.88896"	"1503.88850"	"0.31"	"0.00023"	"5/74"	"5"	"74"	"120184.534545898"	"HCD"	"MS2"	"11.98496"	"7.2"	"100.000"	"91.6945"	"31633"	"31633"	"31626"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.6"	""	"8.7"	""	"10.5"	""	"16.3"	""	"16.1"	"14.0"	""	"846"	"29"	"36.000"	"29.000"	"0.0569298929765666"	"21"	"0.0001889"	"0.0007477"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44812"	"1503.88896"	"1503.88850"	"0.31"	"0.00023"	"3/74"	"3"	"74"	"152789.86529541"	"HCD"	"MS2"	"8.790384"	"4.5"	"100.000"	"109.7602"	"36062"	"36062"	"36058"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.7"	""	"5.0"	""	"4.8"	""	"8.3"	""	"9.4"	"9.0"	""	"846"	"1"	"36.000"	"29.000"	"30.6436411111721"	"13"	"0.008433"	"0.3573"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"752.44812"	"1503.88896"	"1503.88850"	"0.31"	"0.00023"	"10/74"	"10"	"74"	"173518.656677246"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"93.1380"	"32112"	"32112"	"32105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.3"	""	"7.5"	""	"6.8"	""	"12.8"	""	"13.2"	"11.7"	""	"846"	"20"	"36.000"	"29.000"	"0.469180946855996"	"19"	"0.0001889"	"0.0005274"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44818"	"1503.88909"	"1503.88850"	"0.39"	"0.00029"	"5/74"	"5"	"74"	"87345.9854125977"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"115.6492"	"37013"	"37013"	"37011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"3.6"	""	"5.7"	""	"9.3"	""	"8.5"	"7.2"	""	"846"	"9"	"36.000"	"29.000"	"5.51239547285323"	"13"	"0.0007444"	"0.007213"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"752.44818"	"1503.88909"	"1503.88850"	"0.39"	"0.00029"	"5/74"	"5"	"74"	"117261.796203613"	"HCD"	"MS2"	"22.05952"	"7.5"	"100.000"	"89.8420"	"30976"	"30976"	"30963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"7.2"	""	"13.5"	""	"18.0"	""	"12.6"	"13.7"	""	"846"	"32"	"36.000"	"29.000"	"0.0294673015468855"	"26"	"0.0001308"	"0.0002993"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"752.44818"	"1503.88909"	"1503.88850"	"0.39"	"0.00029"	"5/74"	"5"	"74"	"94121.099609375"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"102.3833"	"34709"	"34709"	"34705"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"3.4"	""	"8.1"	""	"8.9"	""	"8.7"	"9.8"	""	"846"	"27"	"36.000"	"29.000"	"0.0853768971837301"	"22"	"0.0001889"	"0.0006329"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44818"	"1503.88909"	"1503.88850"	"0.39"	"0.00029"	"4/74"	"4"	"74"	"123503.374572754"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"110.1313"	"36121"	"36121"	"36118"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"4.5"	""	"4.2"	""	"5.8"	""	"6.5"	"9.0"	""	"846"	"12"	"36.000"	"29.000"	"2.62627601479317"	"13"	"0.001587"	"0.02122"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"752.44818"	"1503.88909"	"1503.88850"	"0.39"	"0.00029"	"4/74"	"4"	"74"	"140655.539794922"	"HCD"	"MS2"	"11.69217"	"3.7"	"100.000"	"118.9593"	"37560"	"37560"	"37555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.7"	""	"5.1"	""	"5.0"	""	"8.6"	""	"6.7"	"6.8"	""	"846"	"11"	"36.000"	"29.000"	"3.14297095330305"	"16"	"0.0006396"	"0.006318"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44818"	"1503.88909"	"1503.88850"	"0.39"	"0.00029"	"5/74"	"5"	"74"	"136083.14251709"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"102.8003"	"34793"	"34793"	"34790"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"4.3"	""	"5.0"	""	"12.5"	""	"7.5"	"8.8"	""	"846"	"20"	"36.000"	"29.000"	"0.464879470079957"	"14"	"0.0006037"	"0.004253"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"752.44818"	"1503.88909"	"1503.88850"	"0.39"	"0.00029"	"5/74"	"5"	"74"	"167790.556091309"	"HCD"	"MS2"	"6.815696"	"5.5"	"100.000"	"101.7545"	"34565"	"34565"	"34561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	"7.3"	""	"7.9"	""	"12.0"	""	"7.8"	"11.6"	""	"846"	"28"	"36.000"	"29.000"	"0.061001479369502"	"21"	"0.0002277"	"0.001301"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"752.44818"	"1503.88909"	"1503.88850"	"0.39"	"0.00029"	"5/74"	"5"	"74"	"1936975.16699219"	"HCD"	"MS2"	"16.94405"	"105.0"	"100.000"	"70.2140"	"23062"	"23062"	"23043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.8"	""	"147.4"	""	"148.6"	""	"178.5"	"0.4"	"193.4"	"191.6"	""	"846"	"29"	"36.000"	"29.000"	"0.0483437535616073"	"24"	"0.0001889"	"0.0007635"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"752.44818"	"1503.88909"	"1503.88850"	"0.39"	"0.00029"	"9/74"	"9"	"74"	"1211339016.42188"	"HCD"	"MS2"	"0"	"235.3"	"0.535"	"67.1882"	"21882"	"21882"	"21875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"261.5"	""	"266.0"	""	"282.7"	""	"488.3"	"5.9"	"450.2"	"479.2"	""	"846"	"36"	"36.000"	"29.000"	"0.0118396909820534"	"26"	"0.000523"	"0.003275"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"752.44824"	"1503.88921"	"1503.88850"	"0.47"	"0.00035"	"5/74"	"5"	"74"	"84348.8508911133"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"110.9423"	"36256"	"36256"	"36252"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"4.0"	""	"2.4"	""	"9.8"	""	"4.1"	"8.9"	""	"847"	"28"	"36.000"	"29.000"	"0.0732577228127595"	"20"	"0.0006037"	"0.005849"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44824"	"1503.88921"	"1503.88850"	"0.47"	"0.00035"	"4/74"	"4"	"74"	"70532.0088500977"	"HCD"	"MS2"	"10.62807"	"3.5"	"100.000"	"111.7460"	"36385"	"36385"	"36382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	"5.7"	""	"3.7"	""	"9.1"	""	"4.6"	"6.8"	""	"847"	"6"	"36.000"	"29.000"	"11.0625033358806"	"13"	"0.00119"	"0.0157"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"752.44824"	"1503.88921"	"1503.88850"	"0.47"	"0.00035"	"4/74"	"4"	"74"	"117819.536071777"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"103.9180"	"35036"	"35036"	"35033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"3.9"	""	"6.6"	""	"8.3"	""	"7.9"	"8.7"	""	"847"	"13"	"36.000"	"29.000"	"2.36512127471048"	"15"	"0.0004557"	"0.002616"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.44824"	"1503.88921"	"1503.88850"	"0.47"	"0.00035"	"5/74"	"5"	"74"	"128745.760375977"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"109.0762"	"35941"	"35941"	"35938"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.0"	""	"4.8"	""	"5.9"	""	"5.6"	""	"9.4"	"3.8"	""	"847"	"25"	"36.000"	"29.000"	"0.13178118687644"	"19"	"0.0006037"	"0.004823"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"752.44824"	"1503.88921"	"1503.88850"	"0.47"	"0.00035"	"4/74"	"4"	"74"	"177183.253723145"	"HCD"	"MS2"	"6.741189"	"6.9"	"100.000"	"93.6967"	"32288"	"32288"	"32280"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.7"	""	"7.0"	""	"10.8"	""	"14.6"	""	"13.8"	"13.0"	""	"847"	"19"	"36.000"	"29.000"	"0.569971859942694"	"20"	"0.00103"	"0.01161"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"752.44830"	"1503.88933"	"1503.88850"	"0.55"	"0.00041"	"5/74"	"5"	"74"	"80959.0249023438"	"HCD"	"MS2"	"12.952"	"3.9"	"100.000"	"108.8133"	"35899"	"35899"	"35897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"3.8"	""	"4.4"	""	"6.8"	""	"9.4"	"8.6"	""	"853"	"23"	"36.000"	"29.000"	"0.219745016914119"	"15"	"0.0008453"	"0.008256"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"752.44830"	"1503.88933"	"1503.88850"	"0.55"	"0.00041"	"5/74"	"5"	"74"	"89848.6083374023"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"115.1415"	"36925"	"36925"	"36923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	"4.2"	""	"4.2"	""	"7.1"	""	"6.9"	"8.7"	""	"853"	"23"	"36.000"	"29.000"	"0.219239617399905"	"19"	"0.000523"	"0.003105"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"752.44830"	"1503.88933"	"1503.88850"	"0.55"	"0.00041"	"5/74"	"5"	"74"	"104161.80267334"	"HCD"	"MS2"	"6.855414"	"4.7"	"100.000"	"101.1443"	"34445"	"34445"	"34442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1.9"	""	"5.1"	""	"6.5"	""	"9.8"	""	"9.3"	"12.9"	""	"853"	"29"	"36.000"	"29.000"	"0.0543149064053607"	"22"	"0.0003839"	"0.001879"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"752.44830"	"1503.88933"	"1503.88850"	"0.55"	"0.00041"	"5/74"	"5"	"74"	"5469446.25805664"	"HCD"	"MS2"	"4.465222"	"208.4"	"100.000"	"68.4123"	"22379"	"22379"	"22362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.1"	""	"253.8"	""	"281.5"	""	"409.2"	"1.0"	"391.2"	"408.0"	""	"853"	"31"	"36.000"	"29.000"	"0.0360511427460864"	"25"	"0"	"0.0001573"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"752.44836"	"1503.88945"	"1503.88850"	"0.63"	"0.00048"	"5/74"	"5"	"74"	"87570.1799316406"	"HCD"	"MS2"	"12.20906"	"4.7"	"100.000"	"106.7374"	"35535"	"35535"	"35532"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"5.4"	""	"7.4"	""	"8.2"	""	"9.1"	"10.7"	""	"840"	"26"	"36.000"	"29.000"	"0.109710776884767"	"22"	"0.0002277"	"0.001278"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"752.44836"	"1503.88945"	"1503.88850"	"0.63"	"0.00048"	"8/74"	"8"	"74"	"97741.9818725586"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"102.2785"	"34680"	"34680"	"34678"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.9"	""	"7.0"	""	"5.8"	""	"7.5"	""	"8.2"	"8.2"	""	"840"	"24"	"36.000"	"29.000"	"0.174280697906432"	"24"	"0.0001889"	"0.0006025"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"752.44836"	"1503.88945"	"1503.88850"	"0.63"	"0.00048"	"5/74"	"5"	"74"	"213406.517700195"	"HCD"	"MS2"	"9.233842"	"13.6"	"100.000"	"84.2813"	"28791"	"28791"	"28772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.5"	""	"17.9"	""	"17.5"	""	"28.5"	"0.9"	"22.1"	"25.1"	""	"840"	"32"	"36.000"	"29.000"	"0.0243921055358951"	"26"	"0.0001889"	"0.0005952"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"752.44836"	"1503.88945"	"1503.88850"	"0.63"	"0.00048"	"5/74"	"5"	"74"	"177239.193786621"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"98.4823"	"33747"	"33747"	"33743"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.3"	""	"6.7"	""	"8.9"	""	"10.9"	""	"12.7"	"11.5"	""	"840"	"25"	"36.000"	"29.000"	"0.128898923512429"	"20"	"0.0006037"	"0.005762"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"752.44836"	"1503.88945"	"1503.88850"	"0.63"	"0.00048"	"5/74"	"5"	"74"	"456573.312255859"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"78.0365"	"26244"	"26244"	"26225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.2"	""	"38.6"	""	"40.1"	""	"52.9"	""	"62.1"	"51.7"	""	"840"	"26"	"36.000"	"29.000"	"0.094678046910402"	"22"	"0.0003839"	"0.001634"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44843"	"1503.88957"	"1503.88850"	"0.71"	"0.00054"	"4/74"	"4"	"74"	"99843.2486572266"	"HCD"	"MS2"	"7.336985"	"5.0"	"100.000"	"101.2131"	"34443"	"34443"	"34439"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.0"	""	"5.8"	""	"6.3"	""	"8.5"	""	"11.5"	"10.1"	""	"840"	"14"	"36.000"	"29.000"	"1.61528548459048"	"13"	"0.001058"	"0.01465"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44843"	"1503.88957"	"1503.88850"	"0.71"	"0.00054"	"5/74"	"5"	"74"	"109801.558044434"	"HCD"	"MS2"	"11.58856"	"3.4"	"100.000"	"108.3027"	"35809"	"35809"	"35807"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"3.9"	""	"5.1"	""	"8.5"	""	"7.1"	"8.5"	""	"840"	"18"	"36.000"	"29.000"	"0.706723105649596"	"14"	"0.0006037"	"0.00502"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.44843"	"1503.88957"	"1503.88850"	"0.71"	"0.00054"	"5/74"	"5"	"74"	"721615.644775391"	"HCD"	"MS2"	"23.27853"	"41.2"	"100.000"	"74.6149"	"24859"	"24859"	"24833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.6"	""	"48.0"	""	"50.2"	""	"71.3"	"1.0"	"78.6"	"90.0"	""	"840"	"29"	"36.000"	"29.000"	"0.0549856407659751"	"23"	"0.0003839"	"0.001983"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"501.96805"	"1503.88959"	"1503.88850"	"0.72"	"0.00036"	"7/74"	"7"	"74"	"223256.709411621"	"HCD"	"MS2"	"63.41833"	"14.8"	"100.000"	"94.0892"	"32448"	"32448"	"32432"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.0"	""	"15.3"	""	"20.2"	""	"30.8"	""	"26.9"	"31.4"	""	"840"	"6"	"36.000"	"29.000"	"11.8372083113107"	"13"	"0.0008731"	"0.008761"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7250"	"0.0000"	"1"	"1"	"1"	"501.96805"	"1503.88959"	"1503.88850"	"0.72"	"0.00036"	"11/74"	"11"	"74"	"518786400.017578"	"HCD"	"MS2"	"2.085866"	"41.1"	"2.739"	"67.2123"	"21844"	"21844"	"21835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.1"	""	"53.6"	""	"54.6"	""	"76.7"	""	"79.7"	"80.1"	""	"840"	"40"	"36.000"	"29.000"	"0.00399254013335638"	"26"	"0.0009727"	"0.01038"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7045"	"0.0000"	"1"	"1"	"1"	"501.96808"	"1503.88968"	"1503.88850"	"0.79"	"0.00039"	"11/74"	"11"	"74"	"97863836.3417969"	"HCD"	"MS2"	"1.622179"	"38.2"	"11.951"	"67.7969"	"22076"	"22076"	"22058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.2"	""	"43.8"	""	"45.6"	""	"72.7"	""	"81.3"	"75.0"	""	"840"	"44"	"36.000"	"29.000"	"0.00170313584888321"	"29"	"0.000523"	"0.002964"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44849"	"1503.88970"	"1503.88850"	"0.79"	"0.00060"	"5/74"	"5"	"74"	"105133.639465332"	"HCD"	"MS2"	"21.69031"	"7.4"	"100.000"	"90.1096"	"31078"	"31078"	"31068"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"7.6"	""	"8.6"	""	"17.6"	""	"12.0"	"15.1"	""	"840"	"20"	"36.000"	"29.000"	"0.379532778963366"	"14"	"0.0003839"	"0.002035"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.44849"	"1503.88970"	"1503.88850"	"0.79"	"0.00060"	"5/74"	"5"	"74"	"156150.941345215"	"HCD"	"MS2"	"21.11781"	"9.8"	"100.000"	"88.4586"	"30460"	"30460"	"30449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.3"	""	"12.0"	""	"14.9"	""	"25.0"	""	"15.5"	"19.2"	""	"840"	"30"	"36.000"	"29.000"	"0.0462646510007394"	"24"	"0.0001889"	"0.0009107"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"752.44849"	"1503.88970"	"1503.88850"	"0.79"	"0.00060"	"5/74"	"5"	"74"	"271830.274597168"	"HCD"	"MS2"	"23.04443"	"16.6"	"100.000"	"83.2464"	"28420"	"28420"	"28397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.4"	""	"23.9"	""	"21.9"	""	"29.4"	""	"34.2"	"31.1"	""	"840"	"27"	"36.000"	"29.000"	"0.0885623822971981"	"22"	"0.0001889"	"0.0008531"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.44849"	"1503.88970"	"1503.88850"	"0.79"	"0.00060"	"5/74"	"5"	"74"	"433997.378723145"	"HCD"	"MS2"	"0"	"25.4"	"100.000"	"77.9711"	"26269"	"26269"	"26241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.7"	""	"27.2"	""	"31.4"	""	"46.9"	""	"53.7"	"46.6"	""	"840"	"29"	"36.000"	"29.000"	"0.0569179553187435"	"23"	"0.0003839"	"0.001764"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"752.44849"	"1503.88970"	"1503.88850"	"0.79"	"0.00060"	"5/74"	"5"	"74"	"5323453.19311523"	"HCD"	"MS2"	"1.677427"	"210.3"	"100.000"	"68.4989"	"22363"	"22363"	"22346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.1"	""	"229.8"	""	"272.2"	""	"401.3"	"2.0"	"420.6"	"425.4"	""	"840"	"31"	"36.000"	"29.000"	"0.0349340783863121"	"25"	"0.0001889"	"0.0008802"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.44855"	"1503.88982"	"1503.88850"	"0.88"	"0.00066"	"5/74"	"5"	"74"	"164422.26171875"	"HCD"	"MS2"	"12.99698"	"5.9"	"100.000"	"95.1464"	"32777"	"32777"	"32773"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.3"	""	"7.9"	""	"9.0"	""	"10.9"	""	"11.1"	"10.6"	""	"840"	"29"	"36.000"	"29.000"	"0.0515524477086531"	"24"	"0.0002277"	"0.001191"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"752.44861"	"1503.88994"	"1503.88850"	"0.96"	"0.00072"	"5/74"	"5"	"74"	"116102.016601563"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"116.6811"	"37187"	"37187"	"37185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	""	"6.5"	""	"2.6"	""	"7.6"	""	"8.0"	"9.6"	""	"840"	"24"	"36.000"	"29.000"	"0.158215595573242"	"18"	"0.0002277"	"0.00122"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"501.96823"	"1503.89014"	"1503.88850"	"1.09"	"0.00055"	"11/74"	"11"	"74"	"381594126.21582"	"HCD"	"MS2"	"2.259331"	"44.4"	"4.141"	"67.4991"	"21956"	"21956"	"21945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.8"	""	"50.0"	""	"60.1"	""	"89.2"	"0.5"	"87.0"	"88.2"	""	"842"	"42"	"36.000"	"29.000"	"0.00265633042026161"	"27"	"0.0006037"	"0.005658"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"752.44873"	"1503.89018"	"1503.88850"	"1.12"	"0.00084"	"5/74"	"5"	"74"	"106082.184631348"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"98.2144"	"33672"	"33672"	"33668"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"3.8"	""	"6.3"	""	"13.4"	""	"11.7"	"12.0"	""	"842"	"33"	"36.000"	"29.000"	"0.0232424601937199"	"26"	"0.0001889"	"0.0007428"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.44873"	"1503.89018"	"1503.88850"	"1.12"	"0.00084"	"5/74"	"5"	"74"	"121705.913513184"	"HCD"	"MS2"	"100"	"6.2"	"100.000"	"94.1940"	"32488"	"32488"	"32481"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.0"	""	"7.2"	""	"10.5"	""	"12.0"	""	"12.4"	"11.1"	""	"842"	"19"	"36.000"	"29.000"	"0.537380738509575"	"14"	"0.0006396"	"0.006199"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"752.44897"	"1503.89067"	"1503.88850"	"1.44"	"0.00109"	"9/74"	"9"	"74"	"683935534.304688"	"HCD"	"MS2"	"0.03681416"	"272.4"	"1.126"	"67.4710"	"21995"	"21995"	"21978"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"309.2"	""	"298.2"	""	"358.5"	""	"535.6"	"4.2"	"529.8"	"549.3"	""	"834"	"36"	"36.000"	"29.000"	"0.0116181252731861"	"26"	"0.000523"	"0.002764"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"752.44916"	"1503.89104"	"1503.88850"	"1.69"	"0.00127"	"9/74"	"9"	"74"	"753381568.6875"	"HCD"	"MS2"	"0"	"176.9"	"0.633"	"67.0896"	"21844"	"21844"	"21833"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.4"	""	"182.9"	""	"237.6"	""	"359.6"	""	"376.8"	"359.9"	""	"850"	"16"	"36.000"	"29.000"	"1.19505785291955"	"17"	"0.008678"	"0.381"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"752.44922"	"1503.89116"	"1503.88850"	"1.77"	"0.00133"	"5/74"	"5"	"74"	"111236896.679688"	"HCD"	"MS2"	"0.03989969"	"232.5"	"5.921"	"67.7850"	"22123"	"22123"	"22106"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.2"	""	"247.5"	""	"279.5"	""	"459.3"	"5.8"	"476.9"	"473.0"	""	"850"	"31"	"36.000"	"29.000"	"0.033914774208889"	"25"	"0.0001889"	"0.0008485"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"752.44928"	"1503.89128"	"1503.88850"	"1.85"	"0.00139"	"5/74"	"5"	"74"	"273146.300537109"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"83.2584"	"28374"	"28374"	"28351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.5"	""	"15.9"	""	"21.7"	""	"27.0"	""	"33.6"	"32.5"	""	"850"	"27"	"36.000"	"29.000"	"0.0892049450539999"	"23"	"0.0001889"	"0.000861"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"752.44946"	"1503.89165"	"1503.88850"	"2.09"	"0.00157"	"9/74"	"9"	"74"	"1049672402.03906"	"HCD"	"MS2"	"0"	"232.7"	"0.647"	"67.2467"	"21858"	"21858"	"21843"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.9"	""	"254.1"	""	"297.2"	""	"454.6"	"0.5"	"449.6"	"471.0"	""	"849"	"34"	"36.000"	"29.000"	"0.0161019211121328"	"25"	"0.000523"	"0.003103"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"752.44952"	"1503.89177"	"1503.88850"	"2.17"	"0.00164"	"5/74"	"5"	"74"	"552805712.875"	"HCD"	"MS2"	"0.03159729"	"249.0"	"1.256"	"67.5728"	"21986"	"21986"	"21971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"278.7"	""	"274.0"	""	"309.6"	""	"485.8"	"1.7"	"476.3"	"538.2"	""	"849"	"31"	"36.000"	"29.000"	"0.034031233790807"	"26"	"0.001217"	"0.01635"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"752.44965"	"1503.89202"	"1503.88850"	"2.34"	"0.00176"	"5/74"	"5"	"74"	"140263.345214844"	"HCD"	"MS2"	"16.50767"	"6.7"	"100.000"	"99.2694"	"33963"	"33963"	"33958"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.8"	""	"8.8"	""	"7.0"	""	"14.8"	""	"9.0"	"16.2"	""	"849"	"29"	"36.000"	"29.000"	"0.0560889996712201"	"23"	"0.0001889"	"0.0006273"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"752.44965"	"1503.89202"	"1503.88850"	"2.34"	"0.00176"	"9/74"	"9"	"74"	"288179588.157227"	"HCD"	"MS2"	"0.2862335"	"889.2"	"8.767"	"66.9488"	"21738"	"21738"	"21721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1029.8"	""	"1028.5"	""	"1150.4"	""	"1828.4"	"6.4"	"1646.0"	"1744.5"	""	"849"	"34"	"36.000"	"29.000"	"0.0181918846908713"	"26"	"0.0003839"	"0.001696"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"752.44995"	"1503.89263"	"1503.88850"	"2.74"	"0.00206"	"10/74"	"10"	"74"	"637911.035888672"	"HCD"	"MS2"	"19.49589"	"40.1"	"100.000"	"75.6204"	"25321"	"25321"	"25295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.2"	""	"53.3"	""	"50.1"	""	"75.1"	""	"79.8"	"77.9"	""	"836"	"16"	"36.000"	"29.000"	"0.977633965759609"	"14"	"0.000494"	"0.002709"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTQR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"752.45007"	"1503.89287"	"1503.88850"	"2.91"	"0.00218"	"9/74"	"9"	"74"	"106541392.128906"	"HCD"	"MS2"	"0.1586179"	"257.2"	"6.333"	"67.8715"	"22107"	"22107"	"22090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"282.1"	""	"273.7"	""	"322.5"	""	"504.4"	"6.1"	"518.7"	"534.8"	""	"826"	"34"	"36.000"	"29.000"	"0.0180696629430358"	"26"	"0.0001889"	"0.000763"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNMQALK"	"[R].lEVNMQALk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.45172"	"1503.89617"	"1503.89691"	"-0.49"	"-0.00037"	"8/74"	"8"	"74"	"1143706.14172363"	"HCD"	"MS2"	"27.22613"	"109.6"	"100.000"	"52.0200"	"15714"	"15714"	"15686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.9"	""	"87.6"	""	"99.0"	""	"226.7"	""	"297.8"	"251.1"	""	"846"	"51"	"36.000"	"29.000"	"0.000361693219550221"	""	"0"	"6.394E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNLQAMK"	"[R].lEVNLQAMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"752.45319"	"1503.89910"	"1503.89691"	"1.46"	"0.00109"	"13/74"	"13"	"74"	"2224147.74145508"	"HCD"	"MS2"	"39.61366"	"194.4"	"100.000"	"52.5631"	"15886"	"15886"	"15858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.3"	""	"303.5"	""	"304.5"	""	"282.5"	"1.3"	"372.8"	"354.1"	""	"816"	"25"	"36.000"	"29.000"	"0.129318352492175"	"25"	"0.0001308"	"0.0003128"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNLQAMK"	"[R].lEVNLQAMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"752.45410"	"1503.90093"	"1503.89691"	"2.67"	"0.00201"	"8/74"	"8"	"74"	"2514458.11676025"	"HCD"	"MS2"	"26.02429"	"193.3"	"100.000"	"52.7613"	"16017"	"16017"	"15990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"230.1"	""	"309.5"	""	"294.7"	""	"258.9"	"4.5"	"375.4"	"359.5"	""	"800"	"50"	"36.000"	"29.000"	"0.000436576134579503"	""	"0.0001308"	"0.0002537"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGATIENSK"	"[K].iLGATIENSk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"752.45935"	"1503.91142"	"1503.91466"	"-2.15"	"-0.00162"	"9/84"	"9"	"84"	"16383137.5117188"	"HCD"	"MS2"	"6.060003"	"1190.5"	"99.508"	"42.5292"	"11807"	"11807"	"11788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1469.8"	""	"1341.2"	""	"1583.6"	""	"2133.8"	"9.8"	"2123.2"	"2632.0"	""	"667"	"51"	"35.000"	"28.000"	"0.000257096306932987"	""	"0.0001308"	"0.0002075"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGATIENSK"	"[K].iLGATIENSk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"752.45972"	"1503.91216"	"1503.91466"	"-1.67"	"-0.00125"	"9/84"	"9"	"84"	"26961216.6070557"	"HCD"	"MS2"	"5.964118"	"669.5"	"33.824"	"42.8269"	"11973"	"11973"	"11955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"834.3"	""	"753.2"	""	"904.4"	""	"1177.9"	""	"1190.1"	"1494.4"	""	"666"	"50"	"35.000"	"28.000"	"0.000326170165141096"	"27"	"0"	"0.0001588"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGATIENSK"	"[K].iLGATIENSk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"501.97568"	"1503.91248"	"1503.91466"	"-1.45"	"-0.00073"	"7/84"	"7"	"84"	"34545658.7208252"	"HCD"	"MS2"	"0"	"431.4"	"40.557"	"42.7901"	"11958"	"11958"	"11939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"553.1"	""	"511.1"	""	"592.5"	""	"755.8"	"0.8"	"788.1"	"889.6"	""	"663"	"39"	"35.000"	"28.000"	"0.00372806548870036"	"22"	"0.0003839"	"0.001574"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGATIENSK"	"[K].iLGATIENSk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"501.97592"	"1503.91321"	"1503.91466"	"-0.97"	"-0.00048"	"8/84"	"8"	"84"	"29080511.3023071"	"HCD"	"MS2"	"13.71399"	"631.0"	"72.948"	"42.5338"	"11809"	"11809"	"11788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"800.4"	""	"730.5"	""	"826.0"	""	"1102.1"	""	"1132.6"	"1399.2"	""	"661"	"47"	"35.000"	"28.000"	"0.000619685684916281"	"25"	"0.0001859"	"0.0003162"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDFLIPLSK"	"[K].lDFLIPLSk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"752.47980"	"1503.95232"	"1503.95507"	"-1.83"	"-0.00138"	"11/76"	"11"	"76"	"892175.45715332"	"HCD"	"MS2"	"54.41039"	"44.9"	"100.000"	"80.7262"	"27392"	"27392"	"27374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.8"	""	"52.3"	""	"68.2"	""	"79.2"	""	"83.1"	"78.3"	""	"381"	"14"	"32.000"	"25.000"	"0.83347961032647"	"17"	"0.001454"	"0.02027"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDFLIPLSK"	"[K].lDFLIPLSk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"752.48016"	"1503.95305"	"1503.95507"	"-1.34"	"-0.00101"	"8/76"	"8"	"76"	"1396297.02062988"	"HCD"	"MS2"	"57.83911"	"75.6"	"100.000"	"80.4319"	"27221"	"27221"	"27201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.5"	""	"96.8"	""	"109.0"	""	"136.0"	"0.3"	"130.0"	"127.1"	""	"414"	"25"	"33.000"	"26.000"	"0.0625130006123217"	"24"	"0.0004166"	"0.002223"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDFLIPLSK"	"[K].lDFLIPLSk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"752.48022"	"1503.95317"	"1503.95507"	"-1.26"	"-0.00095"	"8/76"	"8"	"76"	"1136057.29547119"	"HCD"	"MS2"	"37.82213"	"69.7"	"100.000"	"80.4197"	"27267"	"27267"	"27247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.9"	""	"96.8"	""	"100.5"	""	"124.7"	"1.1"	"117.5"	"112.7"	""	"414"	"23"	"33.000"	"26.000"	"0.0993048238677946"	"23"	"0.0001889"	"0.0006653"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDFLIPLSK"	"[K].lDFLIPLSk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"752.48035"	"1503.95342"	"1503.95507"	"-1.10"	"-0.00083"	"11/76"	"11"	"76"	"1011648.24462891"	"HCD"	"MS2"	"51.76746"	"50.4"	"100.000"	"80.7406"	"27347"	"27347"	"27328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.1"	""	"65.6"	""	"73.5"	""	"90.5"	""	"79.3"	"95.4"	""	"414"	"12"	"33.000"	"26.000"	"1.32425110944908"	"16"	"0.00286"	"0.04932"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSFTVDCSK"	"[K].nSFTVDcSk.[A]"	"N-Term(TMT6plex); C7(Methylthio); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"752.87921"	"1504.75115"	"1504.75401"	"-1.90"	"-0.00143"	"7/92"	"7"	"92"	"2086901.86663818"	"HCD"	"MS2"	"0"	"220.3"	"100.000"	"43.8412"	"12333"	"12333"	"12316"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"349.0"	""	"300.1"	""	"326.1"	""	"277.2"	""	"417.5"	"419.5"	""	"639"	"36"	"35.000"	"28.000"	"0.00865906226389125"	"19"	"0.0001889"	"0.0008734"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSFTVDCSK"	"[K].nSFTVDcSk.[A]"	"N-Term(TMT6plex); C7(Methylthio); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"752.87970"	"1504.75212"	"1504.75401"	"-1.25"	"-0.00094"	"6/92"	"6"	"92"	"1822193.47369385"	"HCD"	"MS2"	"0"	"196.5"	"100.000"	"44.1348"	"12503"	"12503"	"12476"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.0"	""	"296.0"	""	"280.3"	""	"248.3"	""	"361.5"	"388.9"	""	"644"	"21"	"35.000"	"28.000"	"0.270306115659246"	"18"	"0.0004557"	"0.002553"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYEEFLSK"	"[K].mYEEFLSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456; P81377"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2; cAMP-dependent protein kinase type I-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1b PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"752.90900"	"1504.81072"	"1504.81217"	"-0.97"	"-0.00073"	"11/64"	"11"	"64"	"1943576.17041016"	"HCD"	"MS2"	"39.97207"	"177.6"	"100.000"	"55.8602"	"17267"	"17267"	"17237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.7"	""	"230.0"	""	"253.0"	""	"242.5"	""	"355.6"	"364.7"	""	"948"	"12"	"36.000"	"29.000"	"3.30200967688504"	"17"	"0.0001889"	"0.0008372"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYEEFLSK"	"[K].mYEEFLSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456; P81377"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2; cAMP-dependent protein kinase type I-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1b PE=2 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"752.90936"	"1504.81145"	"1504.81217"	"-0.48"	"-0.00036"	"7/64"	"7"	"64"	"1756272.32550049"	"HCD"	"MS2"	"41.22709"	"165.9"	"100.000"	"55.6839"	"17141"	"17141"	"17115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.4"	""	"223.2"	""	"227.3"	""	"206.2"	"3.6"	"333.7"	"354.4"	""	"952"	"34"	"36.000"	"29.000"	"0.0199345736996129"	"18"	"0.0001308"	"0.0002667"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.91351"	"1504.81975"	"1504.81938"	"0.24"	"0.00018"	"9/98"	"9"	"98"	"314314.258239746"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"29.7187"	"6617"	"6617"	"6589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.0"	""	"41.9"	""	"38.4"	""	"26.3"	""	"54.3"	"58.5"	""	"1029"	"55"	"37.000"	"30.000"	"0.000169975128863441"	"27"	"0"	"0.0001271"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEGWDAEK"	"[R].iVEGWDAEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"752.92462"	"1504.84197"	"1504.84117"	"0.53"	"0.00040"	"14/74"	"14"	"74"	"1364987.06549072"	"HCD"	"MS2"	"0"	"136.4"	"100.000"	"45.7318"	"13101"	"13101"	"13079"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"201.1"	""	"191.8"	""	"179.9"	""	"189.4"	""	"273.2"	"258.4"	""	"1014"	"30"	"37.000"	"30.000"	"0.0507"	"22"	"0"	"0.0001644"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWWTLPEK"	"[K].sWWTLPEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QYW5"	"Epithelial membrane protein 3 OS=Rattus norvegicus OX=10116 GN=Emp3 PE=2 SV=1"	"Q9QYW5"	"Epithelial membrane protein 3 OS=Rattus norvegicus OX=10116 GN=Emp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"752.93091"	"1504.85454"	"1504.85642"	"-1.25"	"-0.00094"	"7/68"	"7"	"68"	"906973.25958252"	"HCD"	"MS2"	"54.76447"	"74.8"	"100.000"	"61.5836"	"19600"	"19600"	"19571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.2"	""	"72.7"	""	"74.2"	""	"134.3"	"4.1"	"165.1"	"177.9"	""	"1020"	"19"	"37.000"	"30.000"	"0.715434989326599"	"19"	"0.0003571"	"0.001488"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWWTLPEK"	"[K].sWWTLPEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QYW5"	"Epithelial membrane protein 3 OS=Rattus norvegicus OX=10116 GN=Emp3 PE=2 SV=1"	"Q9QYW5"	"Epithelial membrane protein 3 OS=Rattus norvegicus OX=10116 GN=Emp3 PE=2 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"752.93140"	"1504.85552"	"1504.85642"	"-0.60"	"-0.00045"	"10/68"	"10"	"68"	"629906.406188965"	"HCD"	"MS2"	"49.46581"	"59.3"	"100.000"	"61.4963"	"19511"	"19511"	"19481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.7"	""	"68.8"	""	"66.7"	""	"105.8"	"3.1"	"125.3"	"121.8"	""	"1067"	"15"	"37.000"	"30.000"	"1.63732323080668"	"21"	"0.0006737"	"0.00649"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTqR.[Y]"	"N-Term(TMT6plex); Q9(Deamidated)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"502.29422"	"1504.86811"	"1504.87252"	"-2.93"	"-0.00147"	"10/74"	"10"	"74"	"5251585.10748291"	"HCD"	"MS2"	"39.20846"	"45.4"	"100.000"	"69.0153"	"22573"	"22573"	"22554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.3"	""	"61.3"	""	"65.2"	""	"82.8"	"0.3"	"91.6"	"78.1"	""	"971"	"30"	"36.000"	"29.000"	"0.0434699593674328"	"22"	"0.0001889"	"0.0006843"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTqR.[Y]"	"N-Term(TMT6plex); Q9(Deamidated)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"752.94049"	"1504.87370"	"1504.87252"	"0.79"	"0.00059"	"5/74"	"5"	"74"	"11263605.5430298"	"HCD"	"MS2"	"6.433676"	"433.5"	"100.000"	"68.7650"	"22523"	"22523"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"592.3"	""	"627.6"	""	"725.8"	""	"662.0"	""	"781.2"	"715.7"	""	"938"	"30"	"36.000"	"29.000"	"0.0418960271870915"	"27"	"0.0001308"	"0.0002305"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTqR.[Y]"	"N-Term(TMT6plex); Q9(Deamidated)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"752.94086"	"1504.87444"	"1504.87252"	"1.28"	"0.00096"	"5/74"	"5"	"74"	"8777198.75958252"	"HCD"	"MS2"	"9.189096"	"399.6"	"100.000"	"68.8517"	"22507"	"22507"	"22490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"519.8"	""	"589.4"	""	"619.6"	""	"664.2"	""	"706.2"	"688.5"	""	"939"	"30"	"36.000"	"29.000"	"0.0445282468519771"	"27"	"0.0001889"	"0.0004601"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTqR.[Y]"	"N-Term(TMT6plex); Q9(Deamidated)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"752.94299"	"1504.87871"	"1504.87252"	"4.12"	"0.00310"	"5/74"	"5"	"74"	"7708618.94335938"	"HCD"	"MS2"	"3.561738"	"258.5"	"79.505"	"69.1698"	"22636"	"22636"	"22618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"278.4"	""	"272.1"	""	"384.3"	""	"381.5"	""	"671.5"	"472.0"	""	"891"	"30"	"36.000"	"29.000"	"0.0428398270019923"	"27"	"0.0001889"	"0.0006372"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVYPWTQR"	"[R].lLVVYPWTqR.[Y]"	"N-Term(TMT6plex); Q9(Deamidated)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.95038"	"1504.89348"	"1504.87252"	"13.93"	"0.01048"	"5/74"	"5"	"74"	"108425.804382324"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"100.1773"	"34195"	"34195"	"34193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.9"	""	"7.4"	""	"8.4"	""	"8.6"	""	"8.9"	"9.1"	""	"772"	"17"	"35.000"	"28.000"	"0.795403146522221"	"14"	"0.009019"	"0.4029"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATTTPAK"	"[K].kATTTPAk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"502.32672"	"1504.96561"	"1504.96659"	"-0.65"	"-0.00033"	"5/74"	"5"	"74"	"5165997.16723633"	"HCD"	"MS2"	"5.308125"	"319.5"	"100.000"	"24.6801"	"4603"	"4603"	"4579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"459.2"	""	"400.9"	""	"436.4"	""	"583.2"	"4.1"	"617.4"	"525.5"	""	"248"	"16"	"30.000"	"23.000"	"0.310757547375982"	"14"	"0.0002277"	"0.001119"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].iMQWQDVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"753.42999"	"1505.85271"	"1505.85504"	"-1.55"	"-0.00117"	"7/66"	"7"	"66"	"12153318.8141479"	"HCD"	"MS2"	"0"	"775.1"	"82.936"	"50.1684"	"14959"	"14959"	"14942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1866.7"	""	"1463.9"	""	"1213.9"	""	"783.0"	""	"892.0"	"1074.7"	""	"1011"	"44"	"37.000"	"30.000"	"0.00218132893336436"	"26"	"0.0002277"	"0.001174"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].iMQWQDVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"502.62244"	"1505.85276"	"1505.85504"	"-1.52"	"-0.00076"	"10/66"	"10"	"66"	"8939700.33911133"	"HCD"	"MS2"	"39.87416"	"217.7"	"84.449"	"50.1777"	"14962"	"14962"	"14942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"405.9"	""	"355.4"	""	"315.2"	""	"294.1"	"3.8"	"341.0"	"340.7"	""	"1011"	"29"	"37.000"	"30.000"	"0.0688210286986538"	"24"	"0.00103"	"0.0116"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].iMQWQDVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"753.43024"	"1505.85320"	"1505.85504"	"-1.22"	"-0.00092"	"7/66"	"7"	"66"	"8165003.43804932"	"HCD"	"MS2"	"0"	"522.0"	"81.463"	"50.1509"	"14901"	"14901"	"14890"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1289.7"	""	"958.1"	""	"824.6"	""	"525.6"	""	"600.0"	"714.1"	""	"1012"	"41"	"37.000"	"30.000"	"0.003716640172875"	"24"	"0.0001889"	"0.0009928"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].iMQWQDVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"753.43024"	"1505.85320"	"1505.85504"	"-1.22"	"-0.00092"	"7/66"	"7"	"66"	"15204405.380249"	"HCD"	"MS2"	"0"	"610.6"	"50.465"	"49.8707"	"14790"	"14790"	"14778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1451.6"	""	"1195.3"	""	"979.8"	""	"597.3"	"2.1"	"693.1"	"824.6"	""	"1012"	"39"	"37.000"	"30.000"	"0.00571676732824436"	"24"	"0.0002723"	"0.001385"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].iMQWQDVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"753.43060"	"1505.85393"	"1505.85504"	"-0.74"	"-0.00056"	"7/66"	"7"	"66"	"35853870.6230469"	"HCD"	"MS2"	"0"	"813.5"	"28.824"	"49.8642"	"14834"	"14834"	"14814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2067.7"	""	"1597.7"	""	"1271.6"	""	"841.2"	"1.5"	"854.7"	"1010.9"	""	"1008"	"41"	"37.000"	"30.000"	"0.00372761058629352"	"24"	"0.0006037"	"0.004539"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].iMQWQDVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"753.43085"	"1505.85442"	"1505.85504"	"-0.41"	"-0.00031"	"14/66"	"14"	"66"	"7106481.84283447"	"HCD"	"MS2"	"0"	"536.8"	"100.000"	"50.4660"	"15078"	"15078"	"15064"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1262.3"	""	"1001.1"	""	"815.0"	""	"557.6"	"0.7"	"658.5"	"759.0"	""	"1010"	"43"	"37.000"	"30.000"	"0.00258994998915639"	"24"	"0.0002277"	"0.00121"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].iMQWQDVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"502.62320"	"1505.85505"	"1505.85504"	"0.00"	"0.00000"	"10/66"	"10"	"66"	"14910521.1844482"	"HCD"	"MS2"	"29.87962"	"280.7"	"56.465"	"49.9621"	"14875"	"14875"	"14846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"521.3"	""	"493.6"	""	"443.5"	""	"366.5"	""	"407.7"	"420.3"	""	"1006"	"18"	"37.000"	"30.000"	"0.789892490579777"	"18"	"0.002772"	"0.04463"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].iMQWQDVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"753.43121"	"1505.85515"	"1505.85504"	"0.07"	"0.00005"	"7/66"	"7"	"66"	"20703903.3469849"	"HCD"	"MS2"	"3.572425"	"1583.5"	"97.537"	"49.5954"	"14678"	"14678"	"14655"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3906.9"	""	"3108.0"	""	"2412.5"	""	"1701.9"	"8.7"	"1746.4"	"2005.6"	""	"1003"	"41"	"37.000"	"30.000"	"0.00374344052342648"	"24"	"0.0002277"	"0.001337"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].iMQWQDVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"502.62329"	"1505.85532"	"1505.85504"	"0.18"	"0.00009"	"6/66"	"6"	"66"	"5307232.31732178"	"HCD"	"MS2"	"35.32723"	"171.8"	"100.000"	"50.3377"	"15027"	"15027"	"15012"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"315.2"	""	"277.3"	""	"256.6"	""	"233.4"	""	"261.4"	"281.0"	""	"997"	"33"	"36.000"	"29.000"	"0.0264645895449148"	"24"	"0.0008453"	"0.008008"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].iMQWQDVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"502.62363"	"1505.85633"	"1505.85504"	"0.85"	"0.00043"	"9/66"	"9"	"66"	"9580968.61199951"	"HCD"	"MS2"	"32.43745"	"266.9"	"86.148"	"49.7903"	"14758"	"14758"	"14735"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"489.4"	""	"466.7"	""	"398.6"	""	"364.2"	""	"378.7"	"423.3"	""	"973"	"22"	"36.000"	"29.000"	"0.3170172137106"	"20"	"0.002361"	"0.03494"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPFSVENK"	"[K].nLPFSVENk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P80432"	"Cytochrome c oxidase subunit 7C, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox7c PE=1 SV=2"	"P80432"	"Cytochrome c oxidase subunit 7C, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox7c PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"753.43872"	"1505.87016"	"1505.87280"	"-1.75"	"-0.00132"	"8/84"	"8"	"84"	"1537049.49279785"	"HCD"	"MS2"	"0"	"138.0"	"100.000"	"46.6356"	"13519"	"13519"	"13490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.8"	""	"152.7"	""	"173.7"	""	"270.8"	"0.7"	"269.3"	"297.0"	""	"961"	"38"	"36.000"	"29.000"	"0.00775699286555126"	"24"	"0"	"9.87E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLSGWILSK"	"[R].gSLSGWILSk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"753.45526"	"1505.90325"	"1505.90919"	"-3.94"	"-0.00297"	"8/86"	"8"	"86"	"8603430.95343018"	"HCD"	"MS2"	"30.37136"	"600.0"	"100.000"	"61.9067"	"19732"	"19732"	"19715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"773.9"	""	"774.9"	""	"844.4"	""	"1020.2"	"14.2"	"1112.3"	"1147.9"	""	"694"	"51"	"35.000"	"28.000"	"0.000268120163028209"	""	"0"	"0.0001583"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLSGWILSK"	"[R].gSLSGWILSk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"502.63995"	"1505.90531"	"1505.90919"	"-2.58"	"-0.00129"	"12/86"	"12"	"86"	"5401514.1161499"	"HCD"	"MS2"	"41.51622"	"164.2"	"100.000"	"61.7269"	"19605"	"19605"	"19577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.7"	""	"210.0"	""	"218.7"	""	"280.3"	""	"336.2"	"319.8"	""	"668"	"23"	"35.000"	"28.000"	"0.151616499961168"	"23"	"0.0006037"	"0.005437"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLSGWILSK"	"[R].gSLSGWILSk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"753.45746"	"1505.90764"	"1505.90919"	"-1.03"	"-0.00077"	"15/86"	"15"	"86"	"1078049.66009521"	"HCD"	"MS2"	"12.54842"	"97.4"	"100.000"	"62.0768"	"19748"	"19748"	"19721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.7"	""	"123.4"	""	"128.7"	""	"156.9"	""	"172.7"	"221.5"	""	"670"	"52"	"35.000"	"28.000"	"0.000200006821005585"	"28"	"0"	"2.225E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLSGWILSK"	"[R].gSLSGWILSk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.6286"	"0.0000"	"1"	"1"	"1"	"502.64108"	"1505.90870"	"1505.90919"	"-0.33"	"-0.00016"	"9/86"	"9"	"86"	"8837154.53741455"	"HCD"	"MS2"	"20.24098"	"238.5"	"100.000"	"61.9182"	"19736"	"19736"	"19715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"296.3"	""	"288.8"	"2.4"	"325.1"	""	"420.8"	"3.4"	"453.3"	"472.1"	""	"638"	"35"	"35.000"	"28.000"	"0.0104662398503085"	"28"	"0.0002277"	"0.001247"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLSGWILSK"	"[R].gSLSGWILSk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"753.45819"	"1505.90911"	"1505.90919"	"-0.05"	"-0.00004"	"9/86"	"9"	"86"	"7638708.97735596"	"HCD"	"MS2"	"52.43811"	"569.7"	"100.000"	"61.7452"	"19612"	"19612"	"19593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"732.5"	""	"721.1"	""	"791.6"	""	"976.6"	""	"1051.0"	"1131.5"	""	"634"	"48"	"35.000"	"28.000"	"0.0005395842471612"	""	"0"	"7.546E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLSGWILSK"	"[R].gSLSGWILSk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"502.64136"	"1505.90952"	"1505.90919"	"0.22"	"0.00011"	"11/86"	"11"	"86"	"1837980.09716797"	"HCD"	"MS2"	"4.878438"	"64.5"	"100.000"	"62.0333"	"19730"	"19730"	"19705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.2"	""	"77.4"	""	"86.6"	""	"110.9"	"0.4"	"129.3"	"141.6"	""	"632"	"23"	"34.000"	"28.000"	"0.166604636209612"	"23"	"0.0001889"	"0.0009065"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKNELFQR"	"[K].lkNELFQR.[L]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"502.64456"	"1505.91913"	"1505.92042"	"-0.85"	"-0.00043"	"5/68"	"5"	"68"	"32899171.5413818"	"HCD"	"MS2"	"59.56506"	"563.9"	"31.653"	"37.4775"	"9742"	"9742"	"9720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"993.8"	""	"822.8"	""	"820.7"	""	"859.1"	""	"896.2"	"937.5"	""	"559"	"4"	"34.000"	"27.000"	"11.1270954169703"	"13"	"0.001217"	"0.01822"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKNELFQR"	"[K].lkNELFQR.[L]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"502.64508"	"1505.92069"	"1505.92042"	"0.18"	"0.00009"	"5/68"	"5"	"68"	"33464988.8409424"	"HCD"	"MS2"	"51.42437"	"742.6"	"36.749"	"37.5960"	"9834"	"9834"	"9809"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1263.4"	""	"1040.1"	""	"1096.3"	""	"1139.7"	""	"1197.9"	"1285.9"	""	"590"	"3"	"34.000"	"27.000"	"13.6716841322205"	"13"	"0.001158"	"0.01526"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASPQSLCGLR"	"[R].vTASPQSLcGLR.[A]"	"N-Term(TMT6plex); C9(Methylthio)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"753.90082"	"1506.79436"	"1506.79699"	"-1.74"	"-0.00131"	"8/110"	"8"	"110"	"6808232.12994385"	"HCD"	"MS2"	"0"	"254.5"	"76.081"	"52.9700"	"16052"	"16052"	"16034"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"568.2"	""	"477.3"	""	"387.3"	""	"384.4"	"2.8"	"282.9"	"290.8"	""	"993"	"49"	"36.000"	"29.000"	"0.000638144826662005"	"21"	"0"	"1.647E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASPQSLCGLR"	"[R].vTASPQSLcGLR.[A]"	"N-Term(TMT6plex); C9(Methylthio)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"753.90094"	"1506.79460"	"1506.79699"	"-1.58"	"-0.00119"	"8/110"	"8"	"110"	"5438208.36895752"	"HCD"	"MS2"	"0"	"248.4"	"100.000"	"53.1730"	"16185"	"16185"	"16166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"537.8"	""	"470.5"	""	"385.2"	""	"372.7"	"3.1"	"284.3"	"282.7"	""	"990"	"49"	"36.000"	"29.000"	"0.000602012070319952"	"19"	"0"	"1.509E-05"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASPQSLCGLR"	"[R].vTASPQSLcGLR.[A]"	"N-Term(TMT6plex); C9(Methylthio)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"502.93677"	"1506.79575"	"1506.79699"	"-0.82"	"-0.00041"	"14/110"	"14"	"110"	"11394309.4209595"	"HCD"	"MS2"	"22.63077"	"128.3"	"100.000"	"52.9960"	"16113"	"16113"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.0"	""	"202.4"	""	"181.5"	""	"202.5"	"0.1"	"202.9"	"224.8"	""	"993"	"31"	"36.000"	"29.000"	"0.0401716113942066"	"23"	"0.0002277"	"0.001286"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASPQSLCGLR"	"[R].vTASPQSLcGLR.[A]"	"N-Term(TMT6plex); C9(Methylthio)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"502.93689"	"1506.79612"	"1506.79699"	"-0.58"	"-0.00029"	"14/110"	"14"	"110"	"9085389.47259521"	"HCD"	"MS2"	"17.69682"	"76.4"	"62.185"	"52.8646"	"16009"	"16009"	"15986"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.6"	""	"115.7"	""	"111.3"	""	"135.1"	"0.1"	"131.3"	"122.0"	""	"987"	"36"	"36.000"	"29.000"	"0.0115687692036038"	"24"	"0.0001889"	"0.0005929"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASPQSLCGLR"	"[R].vTASPQSLcGLR.[A]"	"N-Term(TMT6plex); C9(Methylthio)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"753.90186"	"1506.79643"	"1506.79699"	"-0.37"	"-0.00028"	"8/110"	"8"	"110"	"8953189.37524414"	"HCD"	"MS2"	"15.70716"	"398.4"	"100.000"	"52.8628"	"16058"	"16058"	"16038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"840.5"	""	"699.5"	""	"639.6"	""	"562.8"	"1.3"	"517.9"	"490.8"	""	"986"	"49"	"36.000"	"29.000"	"0.000626393033867811"	"18"	"0"	"1.736E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASPQSLCGLR"	"[R].vTASPQSLcGLR.[A]"	"N-Term(TMT6plex); C9(Methylthio)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"753.90259"	"1506.79790"	"1506.79699"	"0.61"	"0.00046"	"10/110"	"10"	"110"	"8659904.4362793"	"HCD"	"MS2"	"20.65008"	"402.8"	"100.000"	"52.6733"	"15931"	"15931"	"15906"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"850.2"	""	"735.6"	""	"613.7"	""	"597.6"	"3.2"	"495.6"	"496.6"	""	"1002"	"44"	"36.000"	"30.000"	"0.0019899296628419"	"17"	"0"	"1.908E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADMLSTGK"	"[K].lLADMLSTGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"502.96970"	"1506.89453"	"1506.89657"	"-1.35"	"-0.00068"	"9/80"	"9"	"80"	"2819380.58532715"	"HCD"	"MS2"	"1.567689"	"96.6"	"100.000"	"66.3878"	"21561"	"21561"	"21539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.5"	""	"170.9"	""	"135.1"	""	"89.4"	""	"188.2"	"169.9"	""	"667"	"30"	"35.000"	"28.000"	"0.0311240309315797"	"21"	"0.0001889"	"0.0004092"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADMLSTGK"	"[K].lLADMLSTGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"502.96979"	"1506.89481"	"1506.89657"	"-1.17"	"-0.00059"	"10/80"	"10"	"80"	"6364580.83758545"	"HCD"	"MS2"	"17.2773"	"200.7"	"100.000"	"66.0830"	"21437"	"21437"	"21411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"338.1"	""	"353.1"	""	"316.7"	""	"181.1"	""	"371.6"	"342.5"	""	"670"	"25"	"35.000"	"28.000"	"0.110165296343454"	"24"	"0.0001889"	"0.000876"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADMLSTGK"	"[K].lLADMLSTGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"753.95117"	"1506.89507"	"1506.89657"	"-1.00"	"-0.00075"	"8/80"	"8"	"80"	"4744829.77246094"	"HCD"	"MS2"	"0"	"331.6"	"100.000"	"66.3348"	"21540"	"21540"	"21523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"583.8"	""	"608.2"	""	"481.4"	""	"247.2"	""	"631.8"	"588.3"	""	"662"	"53"	"35.000"	"28.000"	"0.000177757524598554"	"25"	"0"	"6.282E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADMLSTGK"	"[K].lLADMLSTGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"753.95129"	"1506.89531"	"1506.89657"	"-0.84"	"-0.00063"	"8/80"	"8"	"80"	"4665255.07733154"	"HCD"	"MS2"	"3.676898"	"357.7"	"100.000"	"66.0460"	"21422"	"21422"	"21395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"625.0"	""	"619.4"	""	"542.2"	""	"286.7"	""	"679.7"	"635.6"	""	"660"	"55"	"35.000"	"28.000"	"0.000108521038189074"	"25"	"0"	"7.852E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADMLSTGK"	"[K].lLADMLSTGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"753.95135"	"1506.89543"	"1506.89657"	"-0.76"	"-0.00057"	"8/80"	"8"	"80"	"4380733.2923584"	"HCD"	"MS2"	"0"	"325.9"	"100.000"	"66.0978"	"21390"	"21390"	"21369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"545.6"	""	"559.6"	""	"505.0"	""	"263.5"	""	"641.3"	"573.0"	""	"660"	"55"	"35.000"	"28.000"	"0.000107526111330663"	"25"	"0"	"3.85E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADMLSTGK"	"[K].lLADMLSTGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"502.97000"	"1506.89545"	"1506.89657"	"-0.74"	"-0.00037"	"9/80"	"9"	"80"	"2532878.02600098"	"HCD"	"MS2"	"7.809354"	"90.1"	"100.000"	"66.4509"	"21534"	"21534"	"21513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.2"	""	"149.0"	""	"137.3"	""	"90.6"	"0.4"	"168.8"	"162.5"	""	"662"	"30"	"35.000"	"28.000"	"0.0311765456449061"	"25"	"0.0001889"	"0.000896"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADMLSTGK"	"[K].lLADMLSTGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"753.95172"	"1506.89617"	"1506.89657"	"-0.27"	"-0.00020"	"8/80"	"8"	"80"	"4093041.54309082"	"HCD"	"MS2"	"0"	"301.4"	"100.000"	"66.4001"	"21514"	"21514"	"21497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"531.0"	""	"545.5"	""	"447.1"	""	"226.7"	"2.1"	"565.1"	"534.7"	""	"661"	"55"	"35.000"	"28.000"	"0.00010893600987465"	"23"	"0"	"4.405E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADMLSTGK"	"[K].lLADMLSTGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"502.97061"	"1506.89728"	"1506.89657"	"0.47"	"0.00024"	"7/80"	"7"	"80"	"7320019.65075684"	"HCD"	"MS2"	"17.30724"	"223.1"	"100.000"	"66.1416"	"21408"	"21408"	"21385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.5"	""	"392.4"	""	"339.0"	""	"197.9"	"1.7"	"420.5"	"387.8"	""	"666"	"33"	"35.000"	"28.000"	"0.0152912938274677"	"19"	"0.0001889"	"0.0006468"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEVALAYAK"	"[R].lAEVALAYAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"753.96686"	"1506.92644"	"1506.92959"	"-2.09"	"-0.00157"	"9/72"	"9"	"72"	"1174092.83111572"	"HCD"	"MS2"	"12.84696"	"100.6"	"100.000"	"59.9332"	"18926"	"18926"	"18900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.3"	""	"134.8"	""	"133.5"	""	"161.8"	""	"177.4"	"208.7"	""	"482"	"68"	"33.000"	"26.000"	"4.1592693196964E-06"	"26"	"0"	"1.089E-05"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVNDFIIK"	"[K].iSVNDFIIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"753.96704"	"1506.92681"	"1506.92959"	"-1.85"	"-0.00139"	"8/80"	"8"	"80"	"1401859.3414917"	"HCD"	"MS2"	"8.073657"	"114.0"	"100.000"	"65.7579"	"21304"	"21304"	"21283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.1"	""	"141.9"	""	"147.5"	""	"182.1"	"1.4"	"221.0"	"243.6"	""	"459"	"54"	"33.000"	"26.000"	"0.000100874800742981"	""	"0"	"0.0001101"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEVALAYAK"	"[R].lAEVALAYAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"3"	"3"	"0.7755"	"0.0000"	"1"	"1"	"1"	"502.98071"	"1506.92759"	"1506.92959"	"-1.33"	"-0.00067"	"7/72"	"7"	"72"	"4810384.44494629"	"HCD"	"MS2"	"29.29071"	"143.7"	"100.000"	"59.5953"	"18788"	"18788"	"18757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.0"	""	"197.8"	""	"214.5"	""	"238.8"	""	"273.1"	"267.9"	""	"470"	"49"	"33.000"	"26.000"	"0.000281234024857202"	""	"0"	"0.0001822"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVNDFIIK"	"[K].iSVNDFIIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"753.96747"	"1506.92766"	"1506.92959"	"-1.28"	"-0.00096"	"8/80"	"8"	"80"	"3197708.82318115"	"HCD"	"MS2"	"11.49526"	"227.6"	"100.000"	"65.4536"	"21180"	"21180"	"21155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"333.6"	""	"277.4"	""	"301.2"	""	"394.0"	"1.6"	"418.7"	"430.0"	""	"470"	"52"	"33.000"	"26.000"	"0.000153485679872156"	""	"0.0001308"	"0.0002365"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEVALAYAK"	"[R].lAEVALAYAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"502.98096"	"1506.92832"	"1506.92959"	"-0.84"	"-0.00042"	"12/72"	"12"	"72"	"1205005.75402832"	"HCD"	"MS2"	"49.18739"	"49.6"	"100.000"	"59.9769"	"18944"	"18944"	"18916"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.2"	""	"70.3"	""	"68.1"	""	"86.2"	""	"88.0"	"101.0"	""	"465"	"36"	"33.000"	"26.000"	"0.0063448733450287"	"23"	"0"	"0.0001391"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVNDFIIK"	"[K].iSVNDFIIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"0.6579"	"0.0000"	"1"	"1"	"1"	"502.98114"	"1506.92887"	"1506.92959"	"-0.48"	"-0.00024"	"7/80"	"7"	"80"	"2792761.1338501"	"HCD"	"MS2"	"23.97813"	"85.7"	"100.000"	"65.6485"	"21207"	"21207"	"21177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.4"	""	"100.7"	"2.8"	"117.0"	""	"147.1"	"1.0"	"162.7"	"173.7"	""	"465"	"38"	"33.000"	"26.000"	"0.00380559841231966"	""	"0"	"0.0001414"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEVALAYAK"	"[R].lAEVALAYAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"502.98114"	"1506.92887"	"1506.92959"	"-0.48"	"-0.00024"	"7/72"	"7"	"72"	"5428677.70941162"	"HCD"	"MS2"	"12.40273"	"155.3"	"100.000"	"59.4964"	"18694"	"18694"	"18665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.3"	""	"211.4"	""	"227.9"	""	"263.2"	""	"280.7"	"291.4"	""	"465"	"41"	"33.000"	"26.000"	"0.00165738329504416"	"23"	"0"	"0.0001315"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVNDFIIK"	"[K].iSVNDFIIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"502.98117"	"1506.92896"	"1506.92959"	"-0.42"	"-0.00021"	"7/80"	"7"	"80"	"2839855.19659424"	"HCD"	"MS2"	"20.16904"	"83.3"	"100.000"	"65.5737"	"21229"	"21229"	"21203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.3"	""	"114.5"	""	"105.1"	""	"145.0"	""	"164.4"	"169.0"	""	"465"	"25"	"33.000"	"26.000"	"0.0670537324476936"	"23"	"0.0002277"	"0.001187"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVNDFIIK"	"[K].iSVNDFIIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"753.96814"	"1506.92900"	"1506.92959"	"-0.39"	"-0.00029"	"8/80"	"8"	"80"	"1115667.88562012"	"HCD"	"MS2"	"0"	"90.1"	"100.000"	"65.8329"	"21282"	"21282"	"21257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.2"	""	"118.4"	""	"119.3"	""	"145.3"	""	"172.4"	"175.5"	""	"465"	"52"	"33.000"	"26.000"	"0.000156467072586104"	""	"0"	"5.584E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEVALAYAK"	"[R].lAEVALAYAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"753.96832"	"1506.92937"	"1506.92959"	"-0.14"	"-0.00011"	"9/72"	"9"	"72"	"3524734.91937256"	"HCD"	"MS2"	"0"	"246.7"	"100.000"	"59.4781"	"18686"	"18686"	"18665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"336.8"	""	"323.8"	""	"372.4"	""	"378.7"	"1.7"	"435.4"	"488.0"	""	"467"	"64"	"33.000"	"26.000"	"9.02166891421253E-06"	"25"	"0"	"2.263E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVNDFIIK"	"[K].iSVNDFIIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"753.96838"	"1506.92949"	"1506.92959"	"-0.06"	"-0.00005"	"16/80"	"16"	"80"	"2771678.57012939"	"HCD"	"MS2"	"18.05502"	"201.0"	"100.000"	"65.5101"	"21150"	"21150"	"21129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.7"	""	"255.5"	""	"267.0"	""	"342.9"	"0.4"	"367.8"	"418.1"	""	"467"	"55"	"33.000"	"26.000"	"6.62654093141104E-05"	""	"0"	"9.663E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEVALAYAK"	"[R].lAEVALAYAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.8030"	"0.0000"	"1"	"1"	"1"	"753.96869"	"1506.93010"	"1506.92959"	"0.34"	"0.00026"	"9/72"	"9"	"72"	"3436259.45257568"	"HCD"	"MS2"	"4.546631"	"243.4"	"100.000"	"59.6162"	"18796"	"18796"	"18773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"319.8"	""	"317.7"	""	"368.0"	""	"391.7"	""	"431.2"	"478.5"	""	"460"	"66"	"33.000"	"26.000"	"5.58120321868955E-06"	""	"0"	"3.273E-05"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLYLVQGEK"	"[R].vLYLVQGEk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QUR2"	"Dynactin subunit 4 OS=Rattus norvegicus OX=10116 GN=Dctn4 PE=1 SV=1"	"Q9QUR2"	"Dynactin subunit 4 OS=Rattus norvegicus OX=10116 GN=Dctn4 PE=1 SV=1"	"0"	"2"	"2"	"0.1795"	"0.0000"	"1"	"1"	"1"	"753.96875"	"1506.93022"	"1506.92959"	"0.42"	"0.00032"	"7/70"	"7"	"70"	"1742812.63580322"	"HCD"	"MS2"	"0"	"150.6"	"100.000"	"52.7199"	"16000"	"16000"	"15974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"233.2"	""	"235.5"	""	"225.9"	""	"208.4"	"0.2"	"269.4"	"252.2"	""	"460"	"39"	"33.000"	"26.000"	"0.00318953840640535"	""	"0.0001889"	"0.0004507"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEVALAYAK"	"[R].lAEVALAYAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.8615"	"0.0000"	"1"	"1"	"1"	"753.96906"	"1506.93083"	"1506.92959"	"0.83"	"0.00062"	"9/72"	"9"	"72"	"1071124.4487915"	"HCD"	"MS2"	"0"	"100.6"	"100.000"	"59.7953"	"18816"	"18816"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.8"	""	"124.9"	""	"152.9"	""	"161.2"	""	"195.9"	"191.9"	""	"450"	"65"	"33.000"	"26.000"	"6.54911351564986E-06"	"26"	"0"	"1.451E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CVVVGDGAVGK"	"[K].cVVVGDGAVGk.[T]"	"N-Term(TMT6plex); C1(Methylthio); K11(TMT6plex)"	"2"	"3"	"Q8CFN2; Q6RUV5"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2;Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q9JJL4; Q8CFN2; Q6RUV5"	"Rho-related GTP-binding protein RhoQ OS=Rattus norvegicus OX=10116 GN=Rhoq PE=2 SV=1; Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2; Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"754.42188"	"1507.83647"	"1507.83768"	"-0.80"	"-0.00060"	"16/80"	"16"	"80"	"1399369.71673584"	"HCD"	"MS2"	"15.26348"	"122.3"	"100.000"	"45.3381"	"12993"	"12993"	"12971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.2"	""	"181.1"	""	"169.8"	""	"194.0"	""	"238.8"	"230.7"	""	"1009"	"59"	"37.000"	"30.000"	"5.96844464863345E-05"	"23"	"0"	"7.056E-06"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLTLEDFK"	"[K].sPLTLEDFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"754.44171"	"1507.87615"	"1507.87722"	"-0.71"	"-0.00054"	"8/76"	"8"	"76"	"1668446.48382568"	"HCD"	"MS2"	"12.99069"	"150.8"	"100.000"	"56.6823"	"17603"	"17603"	"17573"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"201.7"	""	"185.1"	""	"227.0"	""	"253.7"	"3.6"	"280.3"	"277.9"	""	"782"	"49"	"35.000"	"28.000"	"0.000519011232972328"	"21"	"0"	"0.0001207"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLTLEDFK"	"[K].sPLTLEDFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"754.44312"	"1507.87895"	"1507.87722"	"1.15"	"0.00087"	"8/76"	"8"	"76"	"1638635.78936768"	"HCD"	"MS2"	"26.59593"	"148.4"	"100.000"	"56.4678"	"17461"	"17461"	"17435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"213.2"	""	"194.9"	""	"221.8"	""	"238.1"	"0.4"	"267.7"	"268.9"	""	"755"	"49"	"35.000"	"28.000"	"0.00050224654278673"	"18"	"0"	"0.0001042"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYLQSLPSKTK"	"[R].nYLQSLPSKTK.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"1"	"3"	"3"	"0.1212"	"0.0000"	"1"	"1"	"1"	"503.30069"	"1507.88752"	"1507.86816"	"12.84"	"0.00645"	"8/110"	"8"	"110"	"11746233.4879761"	"HCD"	"MS2"	"14.32407"	"383.5"	"100.000"	"42.7007"	"11922"	"11922"	"11891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"571.3"	""	"532.7"	""	"551.9"	""	"588.2"	"2.8"	"709.4"	"675.4"	""	"678"	"33"	"35.000"	"28.000"	"0.0177909729024673"	""	"0.009955"	"0.4532"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIFGVESGK"	"[K].vNIFGVESGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V7A0"	"WD repeat-containing protein 61 OS=Rattus norvegicus OX=10116 GN=Wdr61 PE=1 SV=1"	"Q4V7A0"	"WD repeat-containing protein 61 OS=Rattus norvegicus OX=10116 GN=Wdr61 PE=1 SV=1"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"754.44781"	"1507.88835"	"1507.88845"	"-0.06"	"-0.00005"	"8/90"	"8"	"90"	"817439.592712402"	"HCD"	"MS2"	"17.39775"	"82.0"	"100.000"	"51.2005"	"15379"	"15379"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.8"	""	"95.3"	""	"113.4"	""	"135.8"	"0.9"	"163.7"	"148.7"	""	"683"	"50"	"35.000"	"28.000"	"0.000380531583221576"	"18"	"0"	"2.886E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIHQLLTDIGR"	"[R].lIHQLLTDIGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"0"	"3"	"3"	"0.3889"	"0.0000"	"1"	"1"	"1"	"503.30957"	"1507.91416"	"1507.91578"	"-1.07"	"-0.00054"	"5/96"	"5"	"96"	"901565.385986328"	"HCD"	"MS2"	"42.63052"	"35.2"	"100.000"	"60.4908"	"19154"	"19154"	"19123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.6"	""	"45.3"	""	"54.1"	""	"57.2"	""	"62.1"	"71.6"	""	"559"	"18"	"34.000"	"27.000"	"0.412459976050613"	"25"	"0.0001889"	"0.0004285"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMALTWASSGVR"	"[K].tMALTWASSGVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"754.90887"	"1508.81047"	"1508.80926"	"0.80"	"0.00060"	"10/104"	"10"	"104"	"1616854.66778564"	"HCD"	"MS2"	"0"	"107.2"	"100.000"	"48.6534"	"14344"	"14344"	"14319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.8"	""	"184.9"	""	"158.4"	""	"140.7"	"2.0"	"185.7"	"190.0"	""	"978"	"63"	"36.000"	"29.000"	"2.44516887603742E-05"	""	"0"	"1.288E-05"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMALTWASSGVR"	"[K].tMALTWASSGVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.7966"	"0.0000"	"1"	"1"	"1"	"754.90967"	"1508.81206"	"1508.80926"	"1.85"	"0.00140"	"10/104"	"10"	"104"	"1441157.94561768"	"HCD"	"MS2"	"0"	"102.7"	"100.000"	"48.3486"	"14172"	"14172"	"14144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.6"	""	"168.2"	""	"157.9"	""	"137.7"	"1.6"	"182.1"	"174.8"	""	"973"	"59"	"36.000"	"29.000"	"5.78206333648109E-05"	"28"	"0"	"5.371E-06"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLLMDLQDR"	"[R].yLLLMDLQDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"754.92029"	"1508.83330"	"1508.83442"	"-0.74"	"-0.00056"	"6/82"	"6"	"82"	"458409.454589844"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"70.8277"	"23313"	"23313"	"23283"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.7"	""	"61.3"	""	"62.0"	""	"81.5"	"2.0"	"93.1"	"85.5"	""	"973"	"22"	"36.000"	"29.000"	"0.293821008191608"	"21"	"0.0003839"	"0.001806"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWIGGVGDCK"	"[R].aWIGGVGDck.[L]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"755.40015"	"1509.79302"	"1509.79581"	"-1.85"	"-0.00140"	"13/72"	"13"	"72"	"1500021.22509766"	"HCD"	"MS2"	"0"	"112.1"	"100.000"	"54.8380"	"16795"	"16795"	"16764"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.2"	""	"151.3"	""	"200.1"	""	"145.8"	"0.2"	"181.9"	"216.9"	""	"979"	"25"	"36.000"	"29.000"	"0.164343562171926"	"21"	"0"	"9.537E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTTQTSLPMFR"	"[K].vTTQTSLPMFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"755.41846"	"1509.82964"	"1509.82967"	"-0.02"	"-0.00001"	"9/102"	"9"	"102"	"1518572.86358643"	"HCD"	"MS2"	"9.433556"	"98.6"	"100.000"	"47.7451"	"13925"	"13925"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.1"	""	"134.0"	""	"127.8"	""	"158.1"	"2.1"	"175.5"	"194.2"	""	"942"	"22"	"36.000"	"29.000"	"0.311186614011578"	"14"	"0.0001889"	"0.0004986"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTTQTSLPMFR"	"[K].vTTQTSLPMFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"755.41858"	"1509.82988"	"1509.82967"	"0.14"	"0.00011"	"9/102"	"9"	"102"	"1669668.94250488"	"HCD"	"MS2"	"0"	"98.0"	"100.000"	"48.0019"	"14078"	"14078"	"14050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.0"	""	"118.6"	""	"128.3"	""	"133.5"	""	"197.5"	"206.1"	""	"946"	"38"	"36.000"	"29.000"	"0.00702847558801754"	"19"	"0"	"0.0001084"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSTFAVDGK"	"[K].nLSTFAVDGk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"503.95383"	"1509.84693"	"1509.86771"	"-13.77"	"-0.00693"	"11/100"	"11"	"100"	"1429968.66473389"	"HCD"	"MS2"	"100"	"71.1"	"100.000"	"44.0980"	"12488"	"12488"	"12460"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.3"	""	"98.9"	""	"104.0"	""	"124.8"	"0.6"	"125.6"	"127.3"	""	"859"	"13"	"36.000"	"29.000"	"2.07473755476082"	"20"	"0.0003571"	"0.001489"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSTFAVDGK"	"[K].nLSTFAVDGk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8923"	"0.0000"	"1"	"1"	"1"	"755.43640"	"1509.86553"	"1509.86771"	"-1.45"	"-0.00109"	"9/100"	"9"	"100"	"5127596.29089355"	"HCD"	"MS2"	"26.3482"	"402.7"	"100.000"	"43.9260"	"12368"	"12368"	"12342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"574.1"	""	"550.1"	""	"577.1"	""	"652.9"	""	"688.8"	"770.6"	""	"713"	"65"	"35.000"	"28.000"	"1.11188413672949E-05"	"23"	"0"	"3.734E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSTFAVDGK"	"[K].nLSTFAVDGk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"503.96024"	"1509.86615"	"1509.86771"	"-1.03"	"-0.00052"	"9/100"	"9"	"100"	"7283240.73901367"	"HCD"	"MS2"	"51.80371"	"222.7"	"100.000"	"43.9741"	"12388"	"12388"	"12358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"281.1"	""	"298.8"	""	"308.1"	""	"393.6"	""	"387.7"	"442.2"	""	"714"	"28"	"35.000"	"28.000"	"0.0558043708422821"	"18"	"0.0001889"	"0.0008709"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSTFAVDGK"	"[K].nLSTFAVDGk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"503.96042"	"1509.86670"	"1509.86771"	"-0.67"	"-0.00034"	"9/100"	"9"	"100"	"7037083.70977783"	"HCD"	"MS2"	"22.70624"	"223.5"	"100.000"	"44.2196"	"12538"	"12538"	"12508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"299.6"	""	"311.9"	""	"335.2"	""	"362.6"	""	"390.2"	"419.5"	""	"698"	"29"	"35.000"	"28.000"	"0.0411931901842453"	"18"	"0.0001889"	"0.0007002"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSTFAVDGK"	"[K].nLSTFAVDGk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"755.43811"	"1509.86894"	"1509.86771"	"0.81"	"0.00061"	"8/100"	"8"	"100"	"5683949.16339111"	"HCD"	"MS2"	"6.274653"	"411.4"	"100.000"	"44.2013"	"12530"	"12530"	"12508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"596.2"	""	"589.0"	""	"597.5"	""	"640.2"	"0.4"	"692.4"	"778.9"	""	"688"	"54"	"35.000"	"28.000"	"0.000142088340684615"	"19"	"0"	"7.473E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDLDWLVK"	"[R].yDLDWLVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"755.43823"	"1509.86919"	"1509.87174"	"-1.69"	"-0.00127"	"7/60"	"7"	"60"	"706273.33807373"	"HCD"	"MS2"	"0"	"65.5"	"100.000"	"71.1790"	"23508"	"23508"	"23482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.9"	""	"79.8"	""	"93.3"	""	"119.5"	"0.5"	"136.9"	"107.2"	""	"688"	"39"	"35.000"	"28.000"	"0.00433070341657193"	"22"	"0.0001308"	"0.0002421"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDLDWLVK"	"[R].yDLDWLVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"755.43896"	"1509.87065"	"1509.87174"	"-0.72"	"-0.00054"	"14/60"	"14"	"60"	"886453.390014648"	"HCD"	"MS2"	"13.89411"	"82.6"	"100.000"	"71.2911"	"23502"	"23502"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.2"	""	"113.1"	""	"122.8"	""	"148.8"	"0.4"	"165.0"	"137.4"	""	"688"	"43"	"35.000"	"28.000"	"0.00190791245257521"	"22"	"7.476E-05"	"0.0001955"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGEDFVK"	"[K].kGEDFVk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"503.97897"	"1509.92237"	"1509.92439"	"-1.34"	"-0.00067"	"4/62"	"4"	"62"	"21464355.9128418"	"HCD"	"MS2"	"10.14924"	"447.8"	"30.318"	"31.6654"	"7371"	"7371"	"7350"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"714.5"	""	"485.8"	""	"586.4"	""	"749.5"	"2.0"	"812.4"	"892.9"	""	"362"	"4"	"32.000"	"25.000"	"7.09052797565087"	"13"	"0.001686"	"0.02329"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGEDFVK"	"[K].kGEDFVk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"503.97943"	"1509.92374"	"1509.92439"	"-0.43"	"-0.00022"	"6/62"	"6"	"62"	"19129853.1519775"	"HCD"	"MS2"	"7.648219"	"607.8"	"46.561"	"31.8006"	"7468"	"7468"	"7450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"922.7"	""	"648.5"	""	"800.0"	""	"1017.5"	""	"1141.9"	"1234.8"	""	"348"	"5"	"32.000"	"25.000"	"5.73520899188777"	"13"	"0.001454"	"0.01982"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEFLSLLTK"	"[K].tEFLSLLTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"755.46729"	"1509.92729"	"1509.92925"	"-1.30"	"-0.00098"	"14/78"	"14"	"78"	"1323029.46313477"	"HCD"	"MS2"	"21.40724"	"99.0"	"100.000"	"71.9490"	"23771"	"23771"	"23745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.6"	""	"143.8"	""	"146.3"	""	"131.4"	"1.1"	"183.9"	"199.7"	""	"335"	"50"	"32.000"	"25.000"	"0.0001588600926029"	""	"0"	"9.911E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEFLSLLTK"	"[K].tEFLSLLTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"755.46759"	"1509.92790"	"1509.92925"	"-0.89"	"-0.00067"	"14/78"	"14"	"78"	"1122715.1831665"	"HCD"	"MS2"	"13.22661"	"87.9"	"100.000"	"71.9265"	"23813"	"23813"	"23793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.6"	""	"120.9"	""	"131.5"	""	"128.7"	""	"175.5"	"172.6"	""	"322"	"48"	"32.000"	"25.000"	"0.000228994934726774"	""	"0"	"0.0001261"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNIVPVIAK"	"[K].vVNIVPVIAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"755.50909"	"1510.01091"	"1510.01326"	"-1.55"	"-0.00117"	"13/88"	"13"	"88"	"1519746.41619873"	"HCD"	"MS2"	"18.47596"	"105.3"	"100.000"	"61.0625"	"19387"	"19387"	"19363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.2"	""	"149.6"	""	"145.4"	""	"169.2"	""	"203.4"	"202.2"	""	"44"	"25"	"23.000"	"16.000"	"0.00684577594163324"	""	"0.0003146"	"0.001425"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNIVPVIAK"	"[K].vVNIVPVIAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"504.00876"	"1510.01172"	"1510.01326"	"-1.02"	"-0.00051"	"7/88"	"7"	"88"	"6193287.5300293"	"HCD"	"MS2"	"15.45744"	"152.5"	"100.000"	"60.7170"	"19246"	"19246"	"19219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.7"	""	"228.0"	""	"216.9"	""	"236.9"	""	"278.0"	"258.1"	""	"44"	"36"	"23.000"	"16.000"	"0.00061577589031956"	""	"0"	"0.0001226"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNIVPVIAK"	"[K].vVNIVPVIAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.2830"	"0.0000"	"1"	"1"	"1"	"755.50952"	"1510.01177"	"1510.01326"	"-0.99"	"-0.00075"	"8/88"	"8"	"88"	"4005743.4810791"	"HCD"	"MS2"	"0"	"203.0"	"100.000"	"60.7079"	"19242"	"19242"	"19219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"312.5"	""	"294.3"	""	"303.1"	""	"310.3"	"1.5"	"343.5"	"355.4"	""	"44"	"53"	"23.000"	"16.000"	"9.98671556630447E-06"	""	"0"	"0.0001187"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNIVPVIAK"	"[K].vVNIVPVIAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.2955"	"0.0000"	"1"	"1"	"1"	"755.50970"	"1510.01213"	"1510.01326"	"-0.74"	"-0.00056"	"14/88"	"14"	"88"	"4351946.8416748"	"HCD"	"MS2"	"3.179261"	"221.1"	"100.000"	"60.7586"	"19210"	"19210"	"19193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"323.9"	""	"299.2"	""	"329.0"	""	"338.2"	""	"411.5"	"407.3"	""	"44"	"44"	"23.000"	"16.000"	"8.1737750401378E-05"	""	"0"	"0.0001389"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNIVPVIAK"	"[K].vVNIVPVIAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"755.51013"	"1510.01299"	"1510.01326"	"-0.18"	"-0.00013"	"13/88"	"13"	"88"	"1653832.76525879"	"HCD"	"MS2"	"32.41888"	"105.5"	"100.000"	"60.4771"	"19095"	"19095"	"19065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.6"	""	"140.1"	""	"150.5"	""	"180.5"	""	"192.0"	"187.3"	""	"44"	"29"	"23.000"	"16.000"	"0.00281463886914655"	""	"0.0001889"	"0.0008423"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNIVPVIAK"	"[K].vVNIVPVIAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"0.2449"	"0.0000"	"1"	"1"	"1"	"504.00940"	"1510.01364"	"1510.01326"	"0.26"	"0.00013"	"7/88"	"7"	"88"	"7733082.38269043"	"HCD"	"MS2"	"10.46597"	"178.4"	"100.000"	"60.6134"	"19150"	"19150"	"19129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.8"	""	"254.6"	""	"273.9"	""	"285.7"	""	"314.7"	"305.8"	""	"40"	"49"	"23.000"	"16.000"	"2.63651347711282E-05"	""	"0"	"0.0001493"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWEAFLPEAR"	"[K].yWEAFLPEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"755.89734"	"1510.78740"	"1510.78918"	"-1.18"	"-0.00089"	"6/82"	"6"	"82"	"1626552.15246582"	"HCD"	"MS2"	"17.47147"	"88.2"	"100.000"	"68.9788"	"22558"	"22558"	"22538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.8"	""	"109.1"	""	"117.7"	""	"140.1"	""	"172.7"	"180.8"	""	"932"	"35"	"36.000"	"29.000"	"0.0156814391328979"	"15"	"0.0001889"	"0.00104"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWEAFLPEAR"	"[K].yWEAFLPEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"755.89819"	"1510.78911"	"1510.78918"	"-0.05"	"-0.00004"	"6/82"	"6"	"82"	"1656478.72088623"	"HCD"	"MS2"	"20.58525"	"90.0"	"100.000"	"68.8550"	"22559"	"22559"	"22538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.4"	""	"115.7"	""	"126.0"	""	"142.0"	""	"167.1"	"171.1"	""	"935"	"39"	"36.000"	"29.000"	"0.00651300805376929"	"17"	"0.0001308"	"0.0002682"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILFEVFDENR"	"[R].iLFEVFDENR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"755.90808"	"1510.80889"	"1510.81031"	"-0.94"	"-0.00071"	"8/82"	"8"	"82"	"617108.996887207"	"HCD"	"MS2"	"0"	"42.2"	"100.000"	"74.6792"	"24937"	"24937"	"24911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.7"	""	"55.8"	""	"56.1"	""	"80.1"	"3.6"	"76.8"	"67.6"	""	"924"	"53"	"36.000"	"29.000"	"0.000212638536994587"	"28"	"0"	"1.373E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVLSGGSTMFR"	"[K].nIVLSGGSTMFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"755.91492"	"1510.82256"	"1510.82491"	"-1.56"	"-0.00118"	"11/118"	"11"	"118"	"4585257.55297852"	"HCD"	"MS2"	"11.43146"	"224.8"	"100.000"	"49.1157"	"14533"	"14533"	"14511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.3"	""	"365.9"	""	"359.1"	""	"252.6"	"1.6"	"423.3"	"440.3"	""	"904"	"52"	"36.000"	"29.000"	"0.000296577660368913"	"18"	"0"	"1.191E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVLSGGSTMFR"	"[K].nIVLSGGSTMFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"755.91553"	"1510.82378"	"1510.82491"	"-0.75"	"-0.00057"	"10/118"	"10"	"118"	"6735321.82397461"	"HCD"	"MS2"	"16.09604"	"309.4"	"100.000"	"48.8796"	"14389"	"14389"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"404.5"	""	"505.0"	""	"468.0"	""	"321.9"	""	"608.5"	"628.9"	""	"900"	"55"	"36.000"	"29.000"	"0.000128000749835156"	"24"	"0"	"7.736E-06"	"1.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLFVFDLK"	"[K].gDLFVFDLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"756.44598"	"1511.88469"	"1511.88739"	"-1.78"	"-0.00135"	"12/74"	"12"	"74"	"1259607.58392334"	"HCD"	"MS2"	"40.30716"	"103.2"	"100.000"	"74.7139"	"24951"	"24951"	"24927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.5"	""	"164.6"	""	"149.3"	""	"166.3"	"0.8"	"175.3"	"179.2"	""	"527"	"33"	"34.000"	"27.000"	"0.0122118263350512"	"23"	"0"	"0.0001467"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLFVFDLK"	"[K].gDLFVFDLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"756.44733"	"1511.88738"	"1511.88739"	"-0.01"	"-0.00001"	"8/74"	"8"	"74"	"1186884.36688232"	"HCD"	"MS2"	"35.99165"	"97.0"	"100.000"	"74.7325"	"24907"	"24907"	"24881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.0"	""	"145.1"	""	"163.6"	""	"151.7"	""	"149.9"	"179.4"	""	"522"	"50"	"34.000"	"27.000"	"0.00023315273125439"	""	"0"	"0.0001204"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIFNGTFVK"	"[R].qIFNGTFVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"756.45245"	"1511.89763"	"1511.89862"	"-0.65"	"-0.00050"	"14/80"	"14"	"80"	"7478109.25341797"	"HCD"	"MS2"	"23.11854"	"658.4"	"100.000"	"49.5347"	"14654"	"14654"	"14623"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"976.0"	""	"947.9"	""	"999.3"	""	"1008.9"	"2.8"	"1142.5"	"1153.7"	""	"451"	"45"	"33.000"	"26.000"	"0.000796428047880862"	"24"	"0.0001308"	"0.000235"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIFNGTFVK"	"[R].qIFNGTFVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"756.45245"	"1511.89763"	"1511.89862"	"-0.65"	"-0.00050"	"14/80"	"14"	"80"	"7828828.68463135"	"HCD"	"MS2"	"13.05723"	"636.7"	"100.000"	"49.8041"	"14810"	"14810"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"931.2"	""	"903.5"	""	"965.4"	""	"994.4"	""	"1103.2"	"1129.3"	""	"451"	"43"	"33.000"	"26.000"	"0.00125068098272009"	""	"0.0001859"	"0.0003299"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVSQPQPGR"	"[R].kGVSQPQPGR.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.63928"	"1511.90329"	"1511.90583"	"-1.68"	"-0.00085"	"13/90"	"13"	"90"	"957074.385314941"	"HCD"	"MS2"	"21.6161"	"55.8"	"100.000"	"23.2933"	"4010"	"4010"	"3998"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.9"	""	"87.6"	""	"95.8"	""	"69.2"	""	"92.1"	"97.3"	""	"431"	"12"	"33.000"	"26.000"	"1.49433261196571"	"13"	"0.0001308"	"0.0002888"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVSQPQPGR"	"[R].kGVSQPQPGR.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.63959"	"1511.90421"	"1511.90583"	"-1.07"	"-0.00054"	"14/90"	"14"	"90"	"2318463.31768799"	"HCD"	"MS2"	"4.711417"	"105.7"	"100.000"	"23.0198"	"3903"	"3903"	"3894"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.2"	""	"150.9"	""	"145.3"	""	"160.0"	""	"184.9"	"187.8"	""	"423"	"14"	"33.000"	"26.000"	"0.877627800171678"	"13"	"7.476E-05"	"0.0001892"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVSQPQPGR"	"[R].kGVSQPQPGR.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.63968"	"1511.90448"	"1511.90583"	"-0.89"	"-0.00045"	"7/90"	"7"	"90"	"2504700.95684814"	"HCD"	"MS2"	"5.78704"	"116.8"	"100.000"	"23.0805"	"3962"	"3962"	"3942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.0"	""	"166.1"	""	"170.2"	""	"199.8"	""	"189.2"	"195.0"	""	"423"	"8"	"33.000"	"26.000"	"3.51002630923044"	"13"	"0.0006037"	"0.004848"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAILQLGNGIR"	"[R].dLAILQLGNGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.64029"	"1511.90631"	"1511.91069"	"-2.90"	"-0.00146"	"9/100"	"9"	"100"	"1155229.79034424"	"HCD"	"MS2"	"31.50572"	"55.7"	"100.000"	"64.2895"	"20705"	"20705"	"20675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.9"	""	"71.9"	""	"69.6"	""	"87.8"	"2.4"	"112.9"	"98.8"	""	"421"	"7"	"33.000"	"26.000"	"4.16152109243547"	"13"	"0.001587"	"0.02112"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAILQLGNGIR"	"[R].dLAILQLGNGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8354"	"0.0000"	"1"	"1"	"1"	"756.45728"	"1511.90727"	"1511.91069"	"-2.26"	"-0.00171"	"10/100"	"10"	"100"	"1315173.15374756"	"HCD"	"MS2"	"0"	"68.8"	"100.000"	"64.1074"	"20630"	"20630"	"20611"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.6"	""	"105.3"	""	"116.6"	""	"91.7"	"1.2"	"107.7"	"114.1"	""	"417"	"79"	"33.000"	"26.000"	"2.93160908781087E-07"	""	"0"	"4.301E-06"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAILQLGNGIR"	"[R].dLAILQLGNGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"756.45844"	"1511.90959"	"1511.91069"	"-0.73"	"-0.00055"	"9/100"	"9"	"100"	"1182326.11352539"	"HCD"	"MS2"	"6.874048"	"63.7"	"100.000"	"64.1092"	"20578"	"20578"	"20553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.2"	""	"89.7"	""	"104.7"	""	"91.4"	"2.2"	"100.6"	"114.8"	""	"395"	"64"	"32.000"	"25.000"	"7.56078868050724E-06"	""	"0"	"3.864E-06"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDVVVNNAGILR"	"[R].iDVVVNNAGILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.8395"	"0.0000"	"1"	"1"	"1"	"756.45856"	"1511.90984"	"1511.91069"	"-0.57"	"-0.00043"	"10/100"	"10"	"100"	"3981983.33227539"	"HCD"	"MS2"	"0"	"182.7"	"100.000"	"58.2118"	"18228"	"18228"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"235.8"	""	"314.9"	""	"262.9"	""	"275.7"	"2.0"	"295.7"	"342.0"	""	"412"	"81"	"33.000"	"26.000"	"1.71738324031644E-07"	""	"0"	"8.608E-06"	"1.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDVVVNNAGILR"	"[R].iDVVVNNAGILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.8395"	"0.0000"	"1"	"1"	"1"	"756.45905"	"1511.91081"	"1511.91069"	"0.08"	"0.00006"	"10/100"	"10"	"100"	"3771274.34454346"	"HCD"	"MS2"	"9.583827"	"168.1"	"100.000"	"58.0361"	"18102"	"18102"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.4"	""	"275.2"	""	"245.3"	""	"271.6"	"0.0"	"271.4"	"297.1"	""	"408"	"81"	"33.000"	"26.000"	"1.66199673940251E-07"	""	"0"	"3.447E-06"	"1.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSYTTPK"	"[K].kSYTTPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62982"	"Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2"	"P62982"	"Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.65109"	"1511.93872"	"1511.94004"	"-0.87"	"-0.00044"	"5/66"	"5"	"66"	"5111793.03942871"	"HCD"	"MS2"	"25.07145"	"332.9"	"100.000"	"26.7566"	"5412"	"5412"	"5384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"580.4"	""	"541.5"	""	"562.8"	""	"497.3"	"2.3"	"507.1"	"450.5"	""	"292"	"9"	"31.000"	"24.000"	"1.75126898259809"	"13"	"0.0003571"	"0.001501"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSYTTPK"	"[K].kSYTTPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62982"	"Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2"	"P62982"	"Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.65161"	"1511.94028"	"1511.94004"	"0.16"	"0.00008"	"9/66"	"9"	"66"	"6222612.00177002"	"HCD"	"MS2"	"30.10181"	"385.3"	"100.000"	"26.8174"	"5473"	"5473"	"5452"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"685.1"	""	"656.8"	""	"654.1"	""	"570.0"	""	"572.8"	"496.4"	""	"279"	"7"	"31.000"	"24.000"	"2.84167369839947"	"13"	"0.0005564"	"0.003482"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEVPALVQK"	"[K].vAEVPALVQk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"756.48065"	"1511.95403"	"1511.95614"	"-1.39"	"-0.00105"	"9/74"	"9"	"74"	"4158043.30615234"	"HCD"	"MS2"	"0"	"246.1"	"100.000"	"47.3277"	"13802"	"13802"	"13778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"443.6"	""	"462.3"	""	"266.0"	""	"412.7"	"0.0"	"388.3"	"352.1"	""	"216"	"52"	"30.000"	"23.000"	"7.3016961342334E-05"	"21"	"0"	"4.414E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEVPALVQK"	"[K].vAEVPALVQk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.65631"	"1511.95438"	"1511.95614"	"-1.16"	"-0.00059"	"11/74"	"11"	"74"	"19998955.2147217"	"HCD"	"MS2"	"24.31367"	"287.8"	"53.575"	"47.1010"	"13661"	"13661"	"13640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"433.4"	""	"435.6"	""	"334.1"	""	"509.1"	""	"530.2"	"486.1"	""	"216"	"31"	"30.000"	"23.000"	"0.00791450495790017"	"15"	"0.0001308"	"0.0002172"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEVPALVQK"	"[K].vAEVPALVQk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.65634"	"1511.95447"	"1511.95614"	"-1.10"	"-0.00055"	"11/74"	"11"	"74"	"16077053.4140625"	"HCD"	"MS2"	"18.60807"	"198.9"	"39.285"	"47.7075"	"13957"	"13957"	"13938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"258.1"	""	"279.8"	""	"227.9"	""	"370.4"	""	"388.5"	"363.2"	""	"216"	"29"	"30.000"	"23.000"	"0.0150114884171042"	"14"	"0.0001308"	"0.0002474"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEVPALVQK"	"[K].vAEVPALVQk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"756.48090"	"1511.95452"	"1511.95614"	"-1.07"	"-0.00081"	"9/74"	"9"	"74"	"4320757.27233887"	"HCD"	"MS2"	"6.521894"	"246.2"	"100.000"	"47.0641"	"13646"	"13646"	"13624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"455.6"	""	"424.9"	""	"271.3"	""	"426.1"	""	"392.6"	"355.5"	""	"216"	"51"	"30.000"	"23.000"	"9.29873252359369E-05"	"18"	"0"	"4.819E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEVPALVQK"	"[K].vAEVPALVQk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.65659"	"1511.95520"	"1511.95614"	"-0.62"	"-0.00031"	"11/74"	"11"	"74"	"29131262.9102783"	"HCD"	"MS2"	"28.1883"	"264.2"	"33.657"	"47.4061"	"13834"	"13834"	"13810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"407.3"	""	"390.3"	""	"296.1"	""	"500.3"	""	"468.7"	"439.0"	""	"212"	"31"	"30.000"	"23.000"	"0.00752152434041192"	"15"	"0.0001859"	"0.0003596"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEVPALVQK"	"[K].vAEVPALVQk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.65668"	"1511.95548"	"1511.95614"	"-0.43"	"-0.00022"	"11/74"	"11"	"74"	"18184208.0819092"	"HCD"	"MS2"	"14.09214"	"208.9"	"38.180"	"47.4074"	"13786"	"13786"	"13768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.4"	""	"295.6"	""	"238.8"	""	"376.1"	""	"394.6"	"370.9"	""	"212"	"31"	"30.000"	"23.000"	"0.00815278266703806"	"15"	"0.0001308"	"0.0002516"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEVPALVQK"	"[K].vAEVPALVQk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"756.48163"	"1511.95598"	"1511.95614"	"-0.10"	"-0.00008"	"8/74"	"8"	"74"	"6938968.95361328"	"HCD"	"MS2"	"0"	"370.2"	"100.000"	"47.3705"	"13771"	"13771"	"13752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"691.6"	""	"648.9"	""	"394.9"	""	"595.5"	""	"605.7"	"566.8"	""	"211"	"53"	"30.000"	"23.000"	"4.866900411612E-05"	"20"	"0"	"9.183E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEVPALVQK"	"[K].vAEVPALVQk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"756.48163"	"1511.95598"	"1511.95614"	"-0.10"	"-0.00008"	"9/74"	"9"	"74"	"8680165.76922607"	"HCD"	"MS2"	"0"	"457.9"	"100.000"	"47.6295"	"13925"	"13925"	"13906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"834.9"	""	"808.9"	""	"495.7"	""	"792.7"	"0.1"	"715.3"	"678.2"	""	"211"	"53"	"30.000"	"23.000"	"5.23904899130105E-05"	"20"	"0"	"6.751E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLIGGKPDR"	"[R].vVLIGGkPDR.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.66003"	"1511.96555"	"1511.96737"	"-1.20"	"-0.00061"	"7/78"	"7"	"78"	"94915370.0263672"	"HCD"	"MS2"	"10.53534"	"310.9"	"7.297"	"36.5031"	"9386"	"9386"	"9369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.1"	""	"386.9"	""	"431.5"	""	"515.5"	"0.0"	"589.3"	"597.4"	""	"180"	"15"	"29.000"	"22.000"	"0.271795654836182"	"13"	"0.0003839"	"0.001782"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLIGGKPDR"	"[R].vVLIGGkPDR.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.66025"	"1511.96619"	"1511.96737"	"-0.78"	"-0.00039"	"7/78"	"7"	"78"	"85182516.1040039"	"HCD"	"MS2"	"11.13744"	"429.1"	"11.099"	"36.4161"	"9307"	"9307"	"9290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"603.4"	""	"546.8"	""	"576.8"	""	"721.5"	"0.5"	"809.0"	"809.3"	""	"172"	"16"	"29.000"	"22.000"	"0.228296078329897"	"13"	"0.0001308"	"0.000275"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLIGGKPDR"	"[R].vVLIGGkPDR.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.48682"	"1511.96636"	"1511.96737"	"-0.67"	"-0.00051"	"5/78"	"5"	"78"	"1495713.8770752"	"HCD"	"MS2"	"0"	"85.4"	"100.000"	"36.4113"	"9305"	"9305"	"9274"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.2"	""	"118.5"	""	"114.6"	""	"131.1"	""	"155.6"	"171.2"	""	"172"	"21"	"29.000"	"22.000"	"0.0699034243901126"	"14"	"0.0002277"	"0.001203"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NCMTDLLAK"	"[K].ncMTDLLAk.[L]"	"N-Term(TMT6plex); C2(Methylthio); K9(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"756.90228"	"1512.79729"	"1512.79885"	"-1.03"	"-0.00078"	"8/82"	"8"	"82"	"1696713.36254883"	"HCD"	"MS2"	"0"	"157.4"	"100.000"	"61.4682"	"19553"	"19553"	"19523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.6"	""	"216.1"	""	"251.5"	""	"193.4"	"1.1"	"292.7"	"307.9"	""	"798"	"54"	"36.000"	"29.000"	"0.000161797905643905"	"24"	"0"	"0.0001246"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NCMTDLLAK"	"[K].ncMTDLLAk.[L]"	"N-Term(TMT6plex); C2(Methylthio); K9(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"756.90234"	"1512.79741"	"1512.79885"	"-0.95"	"-0.00072"	"7/82"	"7"	"82"	"344748.318237305"	"HCD"	"MS2"	"36.1515"	"35.3"	"100.000"	"61.6553"	"19576"	"19576"	"19545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.4"	""	"56.5"	""	"49.1"	""	"55.7"	"0.1"	"53.1"	"68.0"	""	"799"	"17"	"36.000"	"29.000"	"0.784362430596001"	"19"	"0.002711"	"0.04178"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NCMTDLLAK"	"[K].ncMTDLLAk.[L]"	"N-Term(TMT6plex); C2(Methylthio); K9(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"756.90344"	"1512.79961"	"1512.79885"	"0.50"	"0.00038"	"16/82"	"16"	"82"	"1817879.03405762"	"HCD"	"MS2"	"12.32149"	"173.1"	"100.000"	"61.3210"	"19439"	"19439"	"19417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.0"	""	"258.8"	""	"301.1"	""	"218.6"	""	"311.8"	"318.3"	""	"797"	"55"	"36.000"	"29.000"	"0.000120068290063817"	"23"	"0"	"8.864E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FELMMQQK"	"[K].fELMMQQk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"756.91864"	"1512.83000"	"1512.83186"	"-1.23"	"-0.00093"	"7/60"	"7"	"60"	"2372653.6595459"	"HCD"	"MS2"	"0"	"228.1"	"100.000"	"52.8045"	"15985"	"15985"	"15954"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.0"	""	"347.8"	""	"336.2"	""	"270.6"	"10.7"	"394.3"	"420.2"	""	"764"	"38"	"35.000"	"28.000"	"0.00609625834244432"	"22"	"0.0001889"	"0.0003795"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FELMMQQK"	"[K].fELMMQQk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"756.91907"	"1512.83086"	"1512.83186"	"-0.66"	"-0.00050"	"7/60"	"7"	"60"	"2425332.28112793"	"HCD"	"MS2"	"10.52776"	"233.5"	"100.000"	"52.9983"	"16114"	"16114"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"389.2"	""	"342.4"	""	"348.0"	""	"267.5"	"10.6"	"418.6"	"434.0"	""	"794"	"34"	"35.000"	"28.000"	"0.0165116512366127"	"21"	"0.0001889"	"0.000509"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIFNGTFVK"	"[R].qIFnGTFVk.[L]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"756.94342"	"1512.87956"	"1512.88264"	"-2.03"	"-0.00154"	"14/80"	"14"	"80"	"2356416.95196533"	"HCD"	"MS2"	"0"	"195.2"	"100.000"	"53.2898"	"16175"	"16175"	"16164"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"282.0"	""	"247.2"	""	"256.9"	""	"314.2"	"2.8"	"385.7"	"362.3"	""	"614"	"43"	"34.000"	"27.000"	"0.00165248823232501"	"25"	"0"	"0.0001228"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIFNGTFVK"	"[R].qIFnGTFVk.[L]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"756.94434"	"1512.88140"	"1512.88264"	"-0.82"	"-0.00062"	"8/80"	"8"	"80"	"3121329.16314697"	"HCD"	"MS2"	"0"	"267.0"	"100.000"	"53.6516"	"16371"	"16371"	"16362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"382.0"	""	"322.3"	""	"347.5"	""	"433.8"	""	"528.9"	"518.0"	""	"606"	"39"	"34.000"	"27.000"	"0.00404056993945487"	"23"	"0.0001308"	"0.0002232"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIFNGTFVK"	"[R].qIFnGTFVk.[L]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"756.94452"	"1512.88176"	"1512.88264"	"-0.58"	"-0.00044"	"7/80"	"7"	"80"	"2023969.0458374"	"HCD"	"MS2"	"15.36744"	"179.1"	"100.000"	"53.5645"	"16280"	"16280"	"16271"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.6"	""	"227.5"	""	"239.3"	""	"272.0"	"5.5"	"367.9"	"335.4"	""	"606"	"36"	"34.000"	"27.000"	"0.00848091339849211"	"25"	"0"	"0.0001685"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIPGSPFTAK"	"[K].hIPGSPFTAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"504.96869"	"1512.89151"	"1512.89387"	"-1.56"	"-0.00079"	"10/78"	"10"	"78"	"7871397.69677734"	"HCD"	"MS2"	"0"	"198.0"	"50.729"	"35.8935"	"9092"	"9092"	"9067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.3"	""	"273.8"	""	"273.9"	""	"342.8"	"1.6"	"363.7"	"357.6"	""	"600"	"29"	"34.000"	"27.000"	"0.0397302460558399"	"19"	"0.0001889"	"0.0005516"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEAFLQR"	"[R].kYEAFLQR.[Y]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"504.96899"	"1512.89243"	"1512.89387"	"-0.95"	"-0.00048"	"6/70"	"6"	"70"	"15375770.0452881"	"HCD"	"MS2"	"17.14949"	"663.9"	"79.724"	"36.9231"	"9515"	"9515"	"9498"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"926.3"	""	"954.9"	""	"941.0"	""	"880.6"	"2.8"	"1199.3"	"1388.0"	""	"607"	"10"	"34.000"	"27.000"	"3.21483505591307"	"18"	"0.0001889"	"0.0007922"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIPGSPFTAK"	"[K].hIPGSPFTAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"504.96930"	"1512.89334"	"1512.89387"	"-0.35"	"-0.00017"	"10/78"	"10"	"78"	"8779535.24639893"	"HCD"	"MS2"	"10.81578"	"239.0"	"68.955"	"35.9369"	"9153"	"9153"	"9129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"336.9"	""	"301.5"	""	"336.6"	""	"412.9"	"2.7"	"429.1"	"444.2"	""	"593"	"34"	"34.000"	"27.000"	"0.0123317496011478"	"20"	"0.0001859"	"0.0003306"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEAFLQR"	"[R].kYEAFLQR.[Y]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"1"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"504.96976"	"1512.89472"	"1512.89387"	"0.56"	"0.00028"	"6/70"	"6"	"70"	"15394832.1794434"	"HCD"	"MS2"	"22.25031"	"744.9"	"94.937"	"37.0233"	"9599"	"9599"	"9574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1042.8"	""	"1102.8"	""	"1042.4"	""	"951.6"	"3.7"	"1349.8"	"1567.6"	""	"590"	"9"	"34.000"	"27.000"	"3.45797632836698"	"17"	"0.0001889"	"0.0006138"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KNHLEGK"	"[R].kNHLEGk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.98618"	"1512.94397"	"1512.94652"	"-1.69"	"-0.00085"	"6/60"	"6"	"60"	"1399897.16131592"	"HCD"	"MS2"	"14.30413"	"104.5"	"100.000"	"23.8341"	"4224"	"4224"	"4202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.0"	""	"127.5"	""	"165.3"	""	"186.1"	"4.3"	"189.7"	"163.3"	""	"319"	"1"	"32.000"	"25.000"	"11.742503205041"	"13"	"0.0006037"	"0.004399"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KNHLEGK"	"[R].kNHLEGk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"1"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"504.98639"	"1512.94461"	"1512.94652"	"-1.26"	"-0.00064"	"6/60"	"6"	"60"	"2460234.74884033"	"HCD"	"MS2"	"16.39252"	"165.2"	"100.000"	"23.8262"	"4254"	"4254"	"4229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"247.6"	""	"205.0"	""	"243.8"	""	"275.5"	"0.2"	"324.6"	"267.7"	""	"317"	"14"	"32.000"	"25.000"	"0.563675639931842"	"15"	"0.0004166"	"0.002197"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLMmYISk.[M]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"757.42908"	"1513.85088"	"1513.85226"	"-0.92"	"-0.00069"	"7/64"	"7"	"64"	"1599400.56109619"	"HCD"	"MS2"	"31.3628"	"137.3"	"100.000"	"54.1647"	"16520"	"16520"	"16493"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.0"	""	"215.0"	""	"237.5"	""	"178.1"	"2.0"	"221.0"	"222.1"	""	"754"	"12"	"35.000"	"28.000"	"2.20465861722469"	"17"	"0.00252"	"0.03825"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNVDSVHAK"	"[K].wNVDSVHAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"505.28851"	"1513.85099"	"1513.85273"	"-1.15"	"-0.00058"	"8/80"	"8"	"80"	"8068432.09576416"	"HCD"	"MS2"	"64.3951"	"378.7"	"100.000"	"34.7400"	"8619"	"8619"	"8590"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"552.8"	""	"505.5"	""	"527.4"	""	"623.1"	"32.1"	"656.0"	"689.8"	""	"762"	"40"	"35.000"	"28.000"	"0.00402647471010404"	"20"	"0"	"5.31E-05"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLmMYISk.[M]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"757.43030"	"1513.85332"	"1513.85226"	"0.70"	"0.00053"	"7/64"	"7"	"64"	"1309180.92340088"	"HCD"	"MS2"	"34.26458"	"110.9"	"100.000"	"50.8392"	"15181"	"15181"	"15154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.2"	""	"181.9"	""	"174.5"	""	"155.6"	"1.4"	"196.0"	"175.9"	""	"721"	"13"	"35.000"	"28.000"	"2.01328505202627"	"20"	"0.0005564"	"0.003438"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLmMYISk.[M]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"757.43109"	"1513.85491"	"1513.85226"	"1.74"	"0.00132"	"8/64"	"8"	"64"	"1688799.47265625"	"HCD"	"MS2"	"60.05209"	"131.2"	"100.000"	"51.1245"	"15348"	"15348"	"15318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"215.0"	""	"204.1"	""	"208.4"	""	"183.6"	""	"216.9"	"215.6"	""	"717"	"7"	"35.000"	"28.000"	"6.91017681378951"	"19"	"0.004346"	"0.1156"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLMmYISk.[M]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"757.43182"	"1513.85637"	"1513.85226"	"2.71"	"0.00205"	"6/64"	"6"	"64"	"2132850.8493042"	"HCD"	"MS2"	"12.37253"	"172.7"	"100.000"	"54.4420"	"16686"	"16686"	"16667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.5"	""	"279.8"	""	"308.9"	""	"220.7"	"3.9"	"284.7"	"273.5"	""	"721"	"9"	"35.000"	"28.000"	"4.86301119174291"	"13"	"0.007752"	"0.3054"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYTQQLAFK"	"[K].gYTQQLAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"757.44073"	"1513.87419"	"1513.87789"	"-2.44"	"-0.00185"	"14/74"	"14"	"74"	"1412224.96435547"	"HCD"	"MS2"	"0"	"139.6"	"100.000"	"41.8934"	"11549"	"11549"	"11528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"253.8"	""	"209.6"	""	"159.4"	""	"225.4"	"2.9"	"237.0"	"232.2"	""	"678"	"44"	"35.000"	"28.000"	"0.0013905919091246"	"20"	"0"	"9.036E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYTQQLAFK"	"[K].gYTQQLAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"505.29697"	"1513.87635"	"1513.87789"	"-1.02"	"-0.00051"	"7/74"	"7"	"74"	"12433566.0092163"	"HCD"	"MS2"	"18.00683"	"506.9"	"100.000"	"41.7217"	"11480"	"11480"	"11451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"812.7"	""	"758.9"	""	"658.6"	""	"812.2"	""	"885.7"	"872.9"	""	"666"	"32"	"35.000"	"28.000"	"0.0226696196445016"	"19"	"0.0001889"	"0.0003787"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYTQQLAFK"	"[K].gYTQQLAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"757.44226"	"1513.87724"	"1513.87789"	"-0.42"	"-0.00032"	"14/74"	"14"	"74"	"5667267.13879395"	"HCD"	"MS2"	"7.792637"	"457.3"	"100.000"	"41.8133"	"11561"	"11561"	"11538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"856.9"	""	"720.3"	""	"487.5"	""	"785.7"	"0.1"	"732.8"	"739.2"	""	"657"	"41"	"35.000"	"28.000"	"0.00286111539300572"	"23"	"0.0001308"	"0.0002189"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYTQQLAFK"	"[K].gYTQQLAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"505.29733"	"1513.87745"	"1513.87789"	"-0.29"	"-0.00015"	"7/74"	"7"	"74"	"17238933.0419922"	"HCD"	"MS2"	"17.34052"	"509.1"	"71.943"	"41.9305"	"11609"	"11609"	"11586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"865.8"	""	"758.0"	""	"645.9"	""	"799.2"	""	"862.5"	"890.1"	""	"643"	"31"	"35.000"	"28.000"	"0.0268028500855212"	"19"	"0.0001889"	"0.0004331"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYTQQLAFK"	"[K].gYTQQLAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"757.44312"	"1513.87895"	"1513.87789"	"0.71"	"0.00053"	"14/74"	"14"	"74"	"5886179.20721436"	"HCD"	"MS2"	"11.77227"	"485.5"	"100.000"	"41.6000"	"11430"	"11430"	"11403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"906.7"	""	"773.2"	""	"519.1"	""	"842.1"	"2.6"	"760.0"	"784.4"	""	"635"	"41"	"35.000"	"28.000"	"0.00275894936298401"	"20"	"0.0001889"	"0.0003777"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSTPIFSK"	"[R].yLSTPIFSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"757.45453"	"1513.90178"	"1513.90304"	"-0.83"	"-0.00063"	"14/74"	"14"	"74"	"10375684.8179321"	"HCD"	"MS2"	"20.3526"	"686.6"	"100.000"	"55.9395"	"17245"	"17245"	"17227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1152.5"	""	"1010.7"	""	"1005.9"	""	"1075.5"	"3.5"	"1168.9"	"1074.5"	""	"598"	"47"	"34.000"	"27.000"	"0.000623262774046089"	"17"	"0.0001308"	"0.0002478"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSTPIFSK"	"[R].yLSTPIFSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"505.30554"	"1513.90207"	"1513.90304"	"-0.64"	"-0.00032"	"8/74"	"8"	"74"	"8680973.63043213"	"HCD"	"MS2"	"7.87705"	"264.2"	"100.000"	"56.1871"	"17400"	"17400"	"17381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"419.2"	""	"397.4"	""	"395.6"	""	"383.3"	"1.1"	"489.7"	"413.6"	""	"598"	"27"	"34.000"	"27.000"	"0.0547862012288992"	"26"	"0.0001889"	"0.0009482"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSTPIFSK"	"[R].yLSTPIFSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9815"	"0.0000"	"1"	"1"	"1"	"757.45477"	"1513.90227"	"1513.90304"	"-0.51"	"-0.00038"	"8/74"	"8"	"74"	"2373258.94793701"	"HCD"	"MS2"	"2.630352"	"186.4"	"100.000"	"56.4656"	"17514"	"17514"	"17493"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.2"	""	"270.7"	""	"260.0"	""	"279.9"	""	"332.9"	"317.3"	""	"598"	"54"	"34.000"	"27.000"	"0.00011632449835329"	"17"	"0.0001889"	"0.0008262"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSTPIFSK"	"[R].yLSTPIFSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"757.45502"	"1513.90276"	"1513.90304"	"-0.18"	"-0.00014"	"14/74"	"14"	"74"	"10885443.934082"	"HCD"	"MS2"	"20.18909"	"726.3"	"100.000"	"56.1479"	"17384"	"17384"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1208.5"	""	"1046.2"	""	"1088.5"	""	"1124.0"	"4.1"	"1279.4"	"1118.0"	""	"581"	"47"	"34.000"	"27.000"	"0.000622509719625378"	"17"	"0.0004166"	"0.002263"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSTPIFSK"	"[R].yLSTPIFSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.5769"	"0.0000"	"1"	"1"	"1"	"505.30582"	"1513.90290"	"1513.90304"	"-0.09"	"-0.00005"	"8/74"	"8"	"74"	"8370348.63415527"	"HCD"	"MS2"	"6.284704"	"258.4"	"100.000"	"55.9881"	"17265"	"17265"	"17243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"407.1"	""	"373.4"	""	"388.7"	""	"378.8"	""	"462.5"	"437.9"	""	"581"	"26"	"34.000"	"27.000"	"0.0726350327572814"	"25"	"0.0003839"	"0.00181"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSTPIFSK"	"[R].yLSTPIFSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"757.45551"	"1513.90373"	"1513.90304"	"0.46"	"0.00035"	"7/74"	"7"	"74"	"2278915.93371582"	"HCD"	"MS2"	"3.520227"	"179.8"	"100.000"	"56.2603"	"17376"	"17376"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.0"	""	"236.3"	""	"272.2"	""	"265.6"	"1.3"	"338.7"	"289.9"	""	"578"	"38"	"34.000"	"27.000"	"0.00426479188116733"	"16"	"7.476E-05"	"0.0001978"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQQIQVLQK"	"[K].aQQIQVLQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"757.47607"	"1513.94487"	"1513.94663"	"-1.16"	"-0.00088"	"16/80"	"16"	"80"	"1845387.83666992"	"HCD"	"MS2"	"0"	"148.7"	"100.000"	"38.2733"	"10069"	"10069"	"10039"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"211.7"	""	"172.8"	""	"140.6"	""	"306.5"	"0.5"	"310.1"	"268.7"	""	"328"	"55"	"32.000"	"25.000"	"4.77357607362924E-05"	""	"0"	"0.0001431"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQQIQVLQK"	"[K].aQQIQVLQk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"757.47650"	"1513.94573"	"1513.94663"	"-0.60"	"-0.00045"	"16/80"	"16"	"80"	"1767560.83123779"	"HCD"	"MS2"	"0"	"146.4"	"100.000"	"38.3846"	"10158"	"10158"	"10129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.1"	""	"176.1"	""	"147.8"	""	"281.9"	""	"303.9"	"269.1"	""	"293"	"57"	"31.000"	"24.000"	"2.7154238283027E-05"	""	"0"	"9.946E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WASVVVPLGK"	"[K].wASVVVPLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.32089"	"1513.94812"	"1513.95066"	"-1.67"	"-0.00084"	"10/72"	"10"	"72"	"1080899.63336182"	"HCD"	"MS2"	"55.41491"	"45.5"	"100.000"	"63.1408"	"20183"	"20183"	"20153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.8"	""	"57.4"	""	"58.9"	""	"64.5"	"0.9"	"100.5"	"99.7"	""	"297"	"12"	"31.000"	"24.000"	"0.941296521216536"	"13"	"0.000494"	"0.002736"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WASVVVPLGK"	"[K].wASVVVPLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"757.47858"	"1513.94988"	"1513.95066"	"-0.51"	"-0.00039"	"9/72"	"9"	"72"	"7461799.39678955"	"HCD"	"MS2"	"3.733282"	"393.0"	"100.000"	"63.0041"	"20180"	"20180"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"439.8"	""	"454.4"	""	"439.7"	""	"644.0"	"11.5"	"804.3"	"942.3"	""	"291"	"43"	"31.000"	"24.000"	"0.000674315268216299"	"20"	"0.0001308"	"0.0002434"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WASVVVPLGK"	"[K].wASVVVPLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.32150"	"1513.94995"	"1513.95066"	"-0.46"	"-0.00023"	"10/72"	"10"	"72"	"16729290.8152466"	"HCD"	"MS2"	"26.40763"	"223.6"	"66.651"	"62.7959"	"20042"	"20042"	"20025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.2"	""	"264.9"	""	"223.3"	""	"371.4"	""	"484.5"	"542.8"	""	"291"	"33"	"31.000"	"24.000"	"0.00651422857576607"	"15"	"0.0003839"	"0.001927"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WASVVVPLGK"	"[K].wASVVVPLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"505.32166"	"1513.95041"	"1513.95066"	"-0.16"	"-0.00008"	"10/72"	"10"	"72"	"17715787.1442261"	"HCD"	"MS2"	"29.99331"	"229.6"	"64.512"	"62.8866"	"20132"	"20132"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.8"	""	"270.3"	""	"248.3"	""	"376.8"	""	"487.7"	"535.0"	""	"289"	"33"	"31.000"	"24.000"	"0.0065745774691682"	"23"	"0.000523"	"0.002977"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WASVVVPLGK"	"[K].wASVVVPLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"2"	"2"	"0.9787"	"0.0000"	"1"	"1"	"1"	"757.47888"	"1513.95049"	"1513.95066"	"-0.11"	"-0.00008"	"8/72"	"8"	"72"	"7110149.89978027"	"HCD"	"MS2"	"3.838859"	"368.4"	"100.000"	"62.9134"	"20090"	"20090"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"430.7"	""	"410.7"	""	"387.9"	""	"605.8"	"11.8"	"784.0"	"873.2"	""	"289"	"47"	"31.000"	"24.000"	"0.00028699071555814"	"16"	"0"	"8.793E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIVNLLK"	"[K].dQLIVNLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.6727"	"0.0000"	"1"	"1"	"1"	"757.48871"	"1513.97014"	"1513.97179"	"-1.09"	"-0.00082"	"8/78"	"8"	"78"	"4632098.44158936"	"HCD"	"MS2"	"11.44062"	"279.7"	"100.000"	"68.1445"	"22269"	"22269"	"22250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"477.1"	""	"348.7"	""	"382.8"	""	"517.6"	"1.0"	"455.3"	"461.9"	""	"200"	"55"	"30.000"	"23.000"	"2.83139199579938E-05"	""	"0"	"0.0001542"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIVNLLK"	"[K].dQLIVNLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.4857"	"0.0000"	"1"	"1"	"1"	"505.32831"	"1513.97037"	"1513.97179"	"-0.93"	"-0.00047"	"10/78"	"10"	"78"	"2654965.41711426"	"HCD"	"MS2"	"4.934778"	"71.0"	"100.000"	"68.5758"	"22445"	"22445"	"22426"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.2"	""	"84.8"	""	"105.1"	""	"114.2"	""	"128.2"	"129.2"	""	"197"	"35"	"29.000"	"22.000"	"0.00287366560879115"	""	"0.0001889"	"0.0005471"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIVNLLK"	"[K].dQLIVNLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"757.48883"	"1513.97038"	"1513.97179"	"-0.93"	"-0.00070"	"7/78"	"7"	"78"	"4996647.29864502"	"HCD"	"MS2"	"9.402345"	"331.6"	"100.000"	"68.2681"	"22268"	"22268"	"22250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"531.9"	""	"433.9"	""	"470.6"	""	"573.4"	""	"542.9"	"586.1"	""	"197"	"52"	"29.000"	"22.000"	"6.25800967873967E-05"	""	"0.0001308"	"0.0002799"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIVNLLK"	"[K].dQLIVNLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"757.48901"	"1513.97075"	"1513.97179"	"-0.68"	"-0.00052"	"8/78"	"8"	"78"	"24985102.0671387"	"HCD"	"MS2"	"0"	"440.2"	"29.988"	"68.4516"	"22395"	"22395"	"22378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"675.4"	""	"553.6"	""	"631.0"	""	"719.8"	"4.7"	"738.7"	"843.7"	""	"193"	"54"	"29.000"	"22.000"	"3.95846959382076E-05"	""	"0.0001889"	"0.0003782"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIVNLLK"	"[K].dQLIVNLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"505.32864"	"1513.97138"	"1513.97179"	"-0.27"	"-0.00014"	"7/78"	"7"	"78"	"2603637.27722168"	"HCD"	"MS2"	"3.364048"	"74.5"	"100.000"	"68.7016"	"22445"	"22445"	"22426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.2"	""	"96.7"	""	"110.2"	""	"114.2"	"2.1"	"138.3"	"136.8"	""	"195"	"44"	"29.000"	"22.000"	"0.000392649108467323"	""	"0"	"0.0001255"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIVNLLK"	"[K].dQLIVNLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.5526"	"0.0000"	"1"	"1"	"1"	"505.32864"	"1513.97138"	"1513.97179"	"-0.27"	"-0.00014"	"7/78"	"7"	"78"	"9977213.95690918"	"HCD"	"MS2"	"4.804072"	"229.5"	"100.000"	"68.2620"	"22317"	"22317"	"22298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"361.1"	""	"284.2"	""	"321.2"	""	"397.1"	""	"384.9"	"424.1"	""	"195"	"38"	"29.000"	"22.000"	"0.00154527086264959"	""	"0"	"0.0001388"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIVNLLK"	"[K].dQLIVNLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"505.32864"	"1513.97138"	"1513.97179"	"-0.27"	"-0.00014"	"7/78"	"7"	"78"	"9728899.92486572"	"HCD"	"MS2"	"4.289714"	"238.1"	"100.000"	"68.3812"	"22315"	"22315"	"22298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.4"	""	"313.6"	""	"340.5"	""	"413.7"	"1.8"	"398.9"	"412.3"	""	"195"	"44"	"29.000"	"22.000"	"0.00037497698749422"	""	"0.0001308"	"0.0002815"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIVNLLK"	"[K].dQLIVNLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"757.48950"	"1513.97173"	"1513.97179"	"-0.04"	"-0.00003"	"7/78"	"7"	"78"	"22872697.6140137"	"HCD"	"MS2"	"0"	"449.2"	"30.445"	"68.5773"	"22395"	"22395"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"693.4"	""	"579.2"	""	"612.8"	""	"726.8"	""	"803.6"	"840.5"	""	"195"	"52"	"29.000"	"22.000"	"6.02565990134955E-05"	""	"0.0001889"	"0.0005485"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDKPILK"	"[R].iDkPILk.[A]"	"N-Term(TMT6plex); K3(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.51605"	"1514.02483"	"1514.02846"	"-2.40"	"-0.00182"	"10/56"	"10"	"56"	"1084288.53063965"	"HCD"	"MS2"	"24.62182"	"105.0"	"100.000"	"38.4679"	"10149"	"10149"	"10119"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.3"	""	"147.5"	""	"165.6"	""	"155.7"	"0.5"	"195.4"	"181.0"	""	"91"	"18"	"26.000"	"19.000"	"0.0774482121319703"	"14"	"0.0006037"	"0.006087"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPFGGASHAK"	"[K].aNPFGGASHAk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"505.61963"	"1514.84433"	"1514.84798"	"-2.41"	"-0.00122"	"9/98"	"9"	"98"	"6465621.42907715"	"HCD"	"MS2"	"34.37737"	"264.0"	"88.773"	"28.5674"	"6180"	"6180"	"6172"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"432.3"	""	"398.0"	""	"449.1"	""	"406.4"	"19.8"	"407.4"	"380.3"	""	"826"	"56"	"36.000"	"29.000"	"0.000106647345873209"	"26"	"0"	"2.155E-06"	"1.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALAQTLNWVR"	"[K].nALAQTLNWVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"A1L1J9"	"Lipase maturation factor 2 OS=Rattus norvegicus OX=10116 GN=Lmf2 PE=2 SV=1"	"A1L1J9"	"Lipase maturation factor 2 OS=Rattus norvegicus OX=10116 GN=Lmf2 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"757.93414"	"1514.86101"	"1514.86408"	"-2.02"	"-0.00153"	"8/100"	"8"	"100"	"1780052.36810303"	"HCD"	"MS2"	"12.82951"	"128.0"	"100.000"	"57.4143"	"17848"	"17848"	"17819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.0"	""	"155.1"	""	"170.9"	""	"202.0"	""	"269.5"	"269.8"	""	"812"	"28"	"36.000"	"29.000"	"0.0666079447919013"	"21"	"0"	"6.909E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALAQTLNWVR"	"[K].nALAQTLNWVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"A1L1J9"	"Lipase maturation factor 2 OS=Rattus norvegicus OX=10116 GN=Lmf2 PE=2 SV=1"	"A1L1J9"	"Lipase maturation factor 2 OS=Rattus norvegicus OX=10116 GN=Lmf2 PE=2 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"757.93591"	"1514.86455"	"1514.86408"	"0.31"	"0.00024"	"10/100"	"10"	"100"	"1408007.84436035"	"HCD"	"MS2"	"24.88435"	"102.6"	"100.000"	"57.6249"	"17988"	"17988"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.0"	""	"117.6"	""	"147.0"	""	"174.9"	""	"208.8"	"206.8"	""	"791"	"22"	"35.000"	"28.000"	"0.246687127433297"	"19"	"0"	"7.974E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFVNFPSAK"	"[R].fFVNFPSAk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q921A4"	"Cytoglobin OS=Rattus norvegicus OX=10116 GN=Cygb PE=1 SV=1"	"Q921A4"	"Cytoglobin OS=Rattus norvegicus OX=10116 GN=Cygb PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"757.94116"	"1514.87505"	"1514.87716"	"-1.39"	"-0.00105"	"7/74"	"7"	"74"	"1245142.55584717"	"HCD"	"MS2"	"25.9565"	"99.7"	"100.000"	"63.8563"	"20528"	"20528"	"20499"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.2"	""	"119.1"	""	"132.6"	""	"168.1"	"3.8"	"182.9"	"208.8"	""	"765"	"24"	"35.000"	"28.000"	"0.151227732176059"	"22"	"0.0001889"	"0.0005948"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFVNFPSAK"	"[R].fFVNFPSAk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q921A4"	"Cytoglobin OS=Rattus norvegicus OX=10116 GN=Cygb PE=1 SV=1"	"Q921A4"	"Cytoglobin OS=Rattus norvegicus OX=10116 GN=Cygb PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"757.94269"	"1514.87810"	"1514.87716"	"0.62"	"0.00047"	"8/74"	"8"	"74"	"1266782.75811768"	"HCD"	"MS2"	"17.25575"	"105.2"	"100.000"	"63.7313"	"20424"	"20424"	"20393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.9"	""	"132.6"	""	"141.1"	""	"186.4"	"4.4"	"200.9"	"190.4"	""	"762"	"33"	"35.000"	"28.000"	"0.0204138526512583"	"19"	"0.0001889"	"0.0007746"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGMDPLPSK"	"[K].vLGMDPLPSk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"505.63843"	"1514.90073"	"1514.90166"	"-0.61"	"-0.00031"	"9/80"	"9"	"80"	"3852762.33734131"	"HCD"	"MS2"	"56.92934"	"121.4"	"100.000"	"54.6766"	"16782"	"16782"	"16757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.8"	""	"162.1"	""	"159.1"	""	"185.0"	""	"240.4"	"246.1"	""	"692"	"35"	"35.000"	"28.000"	"0.0102347231342684"	"23"	"0.0001889"	"0.0006119"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGMDPLPSK"	"[K].vLGMDPLPSk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"505.63876"	"1514.90174"	"1514.90166"	"0.05"	"0.00003"	"9/80"	"9"	"80"	"3609549.23504639"	"HCD"	"MS2"	"35.65305"	"118.7"	"100.000"	"54.4793"	"16648"	"16648"	"16624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.5"	""	"140.7"	""	"154.5"	""	"160.1"	""	"244.9"	"268.2"	""	"689"	"34"	"35.000"	"28.000"	"0.0146956644227149"	"22"	"0.0001859"	"0.0003671"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGMDPLPSK"	"[K].vLGMDPLPSk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"757.95459"	"1514.90190"	"1514.90166"	"0.16"	"0.00012"	"6/80"	"6"	"80"	"2802867.72473145"	"HCD"	"MS2"	"40.57919"	"223.4"	"100.000"	"54.4724"	"16645"	"16645"	"16624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.1"	""	"313.6"	""	"305.7"	""	"309.6"	"1.8"	"413.4"	"440.2"	""	"688"	"38"	"35.000"	"28.000"	"0.00515891583412816"	"23"	"0"	"0.0001256"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGKPIAIK"	"[R].tGkPIAIk.[L]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.67874"	"1515.02167"	"1515.02371"	"-1.35"	"-0.00068"	"4/66"	"4"	"66"	"7265944.08087158"	"HCD"	"MS2"	"32.89139"	"572.4"	"100.000"	"32.9530"	"7898"	"7898"	"7880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"863.3"	""	"800.8"	""	"794.7"	""	"854.2"	""	"1084.4"	"1025.8"	""	"66"	"1"	"25.000"	"18.000"	"2.34160663427919"	"13"	"0.009239"	"0.4148"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGTTFQSFAK"	"[R].aGTTFQSFAk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZK8"	"Deoxyribonuclease-2-alpha OS=Rattus norvegicus OX=10116 GN=Dnase2 PE=2 SV=1"	"Q9QZK8"	"Deoxyribonuclease-2-alpha OS=Rattus norvegicus OX=10116 GN=Dnase2 PE=2 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"758.43219"	"1515.85710"	"1515.85715"	"-0.03"	"-0.00002"	"18/88"	"18"	"88"	"1089746.80883789"	"HCD"	"MS2"	"0"	"112.4"	"100.000"	"40.8045"	"11104"	"11104"	"11077"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.9"	""	"163.6"	""	"162.8"	""	"185.6"	"1.1"	"178.2"	"205.2"	""	"944"	"74"	"36.000"	"29.000"	"1.85755635615127E-06"	"29"	"0"	"1.587E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMEQVIFK"	"[R].fmEQVIFk.[Y]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"758.43652"	"1515.86577"	"1515.86454"	"0.81"	"0.00061"	"7/64"	"7"	"64"	"2874515.26116943"	"HCD"	"MS2"	"43.76789"	"203.0"	"100.000"	"51.8174"	"15631"	"15631"	"15606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.6"	""	"295.7"	""	"267.9"	""	"417.9"	"0.3"	"331.2"	"371.5"	""	"950"	"15"	"36.000"	"29.000"	"1.36676424699944"	"15"	"0.0008731"	"0.008917"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFVGMLPEK"	"[K].hFVGMLPEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"758.44049"	"1515.87370"	"1515.87578"	"-1.37"	"-0.00104"	"8/64"	"8"	"64"	"3159778.01263428"	"HCD"	"MS2"	"18.81037"	"231.3"	"100.000"	"39.2783"	"10525"	"10525"	"10494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"367.8"	""	"335.0"	""	"340.1"	""	"227.7"	""	"442.8"	"481.6"	""	"890"	"53"	"36.000"	"29.000"	"0.000210068053362298"	"25"	"0"	"0.0001117"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFVGMLPEK"	"[K].hFVGMLPEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"379.72400"	"1515.87417"	"1515.87578"	"-1.06"	"-0.00040"	"8/64"	"8"	"64"	"5085989.2880249"	"HCD"	"MS2"	"0"	"234.6"	"100.000"	"39.2058"	"10452"	"10452"	"10422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"330.0"	""	"360.1"	""	"365.7"	""	"254.7"	"7.0"	"432.8"	"472.9"	""	"890"	"26"	"36.000"	"29.000"	"0.122281289813057"	"14"	"0.0002277"	"0.001187"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFVGMLPEK"	"[K].hFVGMLPEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"4"	"4"	"0.8846"	"0.0000"	"1"	"1"	"1"	"379.72412"	"1515.87465"	"1515.87578"	"-0.74"	"-0.00028"	"8/64"	"8"	"64"	"4182538.90081787"	"HCD"	"MS2"	"4.711025"	"168.8"	"93.078"	"39.3381"	"10549"	"10549"	"10526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"240.6"	""	"251.0"	""	"263.3"	"2.1"	"172.6"	"4.9"	"333.7"	"331.5"	""	"848"	"26"	"36.000"	"29.000"	"0.101476588071588"	"18"	"0.0001889"	"0.00105"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFVGMLPEK"	"[K].hFVGMLPEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"505.96329"	"1515.87531"	"1515.87578"	"-0.31"	"-0.00016"	"9/64"	"9"	"64"	"72791547.2198486"	"HCD"	"MS2"	"26.99499"	"856.1"	"39.513"	"39.1055"	"10410"	"10410"	"10390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1257.2"	""	"1264.3"	""	"1304.8"	""	"997.8"	"1.3"	"1557.1"	"1728.1"	""	"892"	"22"	"36.000"	"29.000"	"0.258425198606389"	"19"	"0.0001859"	"0.0003472"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFVGMLPEK"	"[K].hFVGMLPEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"758.44135"	"1515.87541"	"1515.87578"	"-0.24"	"-0.00018"	"14/64"	"14"	"64"	"2704696.1461792"	"HCD"	"MS2"	"10.01639"	"206.6"	"100.000"	"39.2035"	"10451"	"10451"	"10422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.1"	""	"306.7"	""	"309.3"	""	"204.8"	"2.6"	"381.3"	"419.7"	""	"889"	"49"	"36.000"	"29.000"	"0.000553186744932381"	"26"	"0.0001859"	"0.000344"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFVGMLPEK"	"[K].hFVGMLPEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"505.96353"	"1515.87604"	"1515.87578"	"0.17"	"0.00009"	"10/64"	"10"	"64"	"89549210.9313965"	"HCD"	"MS2"	"24.52349"	"694.1"	"27.540"	"39.2096"	"10496"	"10496"	"10478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"987.5"	""	"1029.3"	""	"1079.3"	""	"796.9"	""	"1285.5"	"1405.2"	""	"890"	"28"	"36.000"	"29.000"	"0.0738516173809714"	"21"	"0.0001889"	"0.0004358"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDK"	"[K].lPFPIIDDk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"505.97708"	"1515.91669"	"1515.91869"	"-1.32"	"-0.00067"	"6/66"	"6"	"66"	"1510934.58752441"	"HCD"	"MS2"	"11.03001"	"38.7"	"100.000"	"69.6172"	"22819"	"22819"	"22794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.3"	""	"36.7"	""	"42.9"	""	"71.2"	"2.3"	"94.4"	"94.5"	""	"564"	"35"	"34.000"	"27.000"	"0.00863473688300771"	"23"	"0.0001889"	"0.0003758"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDK"	"[K].lPFPIIDDk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"505.97729"	"1515.91733"	"1515.91869"	"-0.89"	"-0.00045"	"11/66"	"11"	"66"	"4655351.63494873"	"HCD"	"MS2"	"5.841332"	"136.2"	"100.000"	"69.2783"	"22681"	"22681"	"22650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.8"	""	"103.4"	""	"133.7"	""	"277.1"	""	"351.7"	"344.9"	""	"559"	"39"	"34.000"	"27.000"	"0.00343860121442061"	"22"	"0.0001859"	"0.0003703"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDK"	"[K].lPFPIIDDk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"505.97751"	"1515.91797"	"1515.91869"	"-0.47"	"-0.00024"	"11/66"	"11"	"66"	"4293387.6953125"	"HCD"	"MS2"	"8.739477"	"119.2"	"100.000"	"69.1340"	"22673"	"22673"	"22650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.9"	""	"94.9"	""	"125.6"	""	"239.7"	"0.6"	"311.1"	"284.6"	""	"559"	"44"	"34.000"	"27.000"	"0.00102183744255869"	"24"	"0.0001859"	"0.0003454"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDK"	"[K].lPFPIIDDk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"505.97754"	"1515.91806"	"1515.91869"	"-0.41"	"-0.00021"	"6/66"	"6"	"66"	"2490653.29608154"	"HCD"	"MS2"	"5.176834"	"68.7"	"100.000"	"69.4406"	"22798"	"22798"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.7"	""	"53.6"	""	"66.4"	""	"138.0"	"0.4"	"177.3"	"173.7"	""	"567"	"36"	"34.000"	"27.000"	"0.00756054431391839"	"24"	"0.0001859"	"0.0003667"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDK"	"[K].lPFPIIDDk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"758.46289"	"1515.91850"	"1515.91869"	"-0.12"	"-0.00009"	"7/66"	"7"	"66"	"8872891.09014893"	"HCD"	"MS2"	"15.12714"	"379.4"	"100.000"	"69.1224"	"22668"	"22668"	"22650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.4"	""	"303.7"	""	"395.8"	""	"751.5"	"0.4"	"951.1"	"948.2"	""	"556"	"51"	"34.000"	"27.000"	"0.000242686040411895"	""	"0.0001308"	"0.0002465"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPHFLYPK"	"[K].rPHFLYPk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"379.73514"	"1515.91872"	"1515.92002"	"-0.86"	"-0.00033"	"6/72"	"6"	"72"	"10849898.0402832"	"HCD"	"MS2"	"10.084"	"365.2"	"100.000"	"30.8921"	"7057"	"7057"	"7032"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"598.3"	""	"623.1"	""	"475.2"	""	"541.9"	"5.5"	"632.9"	"577.2"	""	"556"	"1"	"34.000"	"27.000"	"23.661637462026"	"13"	"0.0004166"	"0.002198"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDLVEALKR"	"[K].nDLVEALkR.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"1"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"505.97934"	"1515.92347"	"1515.92590"	"-1.60"	"-0.00081"	"5/86"	"5"	"86"	"9589845.68640137"	"HCD"	"MS2"	"26.10588"	"253.0"	"57.901"	"40.2171"	"10863"	"10863"	"10837"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"404.7"	""	"342.3"	""	"354.4"	""	"423.5"	""	"422.4"	"448.3"	""	"592"	"16"	"34.000"	"27.000"	"0.750398074627381"	"19"	"0.0001889"	"0.0009192"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDLVEALKR"	"[K].nDLVEALkR.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"1"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"505.97968"	"1515.92447"	"1515.92590"	"-0.94"	"-0.00048"	"4/86"	"4"	"86"	"13833538.9465332"	"HCD"	"MS2"	"39.38979"	"463.1"	"70.727"	"40.2784"	"10932"	"10932"	"10909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"818.2"	""	"580.6"	""	"637.3"	""	"775.1"	""	"780.3"	"788.3"	""	"580"	"19"	"34.000"	"27.000"	"0.371875868970246"	"20"	"0.0001889"	"0.001083"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNELTQLK"	"[K].vLNELTQLk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"758.47791"	"1515.94853"	"1515.95105"	"-1.66"	"-0.00126"	"8/80"	"8"	"80"	"1469868.31158447"	"HCD"	"MS2"	"0"	"122.1"	"100.000"	"59.7333"	"18844"	"18844"	"18821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.5"	""	"174.2"	""	"177.6"	""	"176.1"	"1.8"	"210.6"	"234.2"	""	"435"	"51"	"33.000"	"26.000"	"0.000185977010052419"	""	"0"	"0.0001522"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGAGESGK"	"[KR].iLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"2"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"505.98776"	"1515.94873"	"1515.95105"	"-1.53"	"-0.00077"	"8/82"	"8"	"82"	"17843334.4759521"	"HCD"	"MS2"	"3.551617"	"184.5"	"44.378"	"57.0855"	"17767"	"17767"	"17749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.5"	""	"214.3"	""	"225.3"	""	"332.9"	""	"400.1"	"407.5"	""	"435"	"59"	"33.000"	"26.000"	"2.45730611441333E-05"	"25"	"0"	"1.94E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGAGESGK"	"[KR].lLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"8"	"P04897; Q63803"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; P29348; P08753; P38406; P04897; P10824; Q63803; P59215"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(olf) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnal PE=2 SV=2; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"505.98776"	"1515.94873"	"1515.95105"	"-1.53"	"-0.00077"	"8/82"	"8"	"82"	"17843334.4759521"	"HCD"	"MS2"	"3.551617"	"184.5"	"44.378"	"57.0855"	"17767"	"17767"	"17749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.5"	""	"214.3"	""	"225.3"	""	"332.9"	""	"400.1"	"407.5"	""	"435"	"59"	"33.000"	"26.000"	"2.45730611441333E-05"	"25"	"0"	"1.94E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGAGESGK"	"[KR].iLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"2"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"758.47827"	"1515.94927"	"1515.95105"	"-1.18"	"-0.00089"	"10/82"	"10"	"82"	"12161752.5574951"	"HCD"	"MS2"	"1.681174"	"380.6"	"50.119"	"57.0811"	"17766"	"17766"	"17749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"356.9"	""	"457.7"	""	"421.3"	""	"665.9"	""	"824.6"	"895.4"	""	"433"	"65"	"33.000"	"26.000"	"6.44848806971419E-06"	"26"	"0"	"2.704E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGAGESGK"	"[KR].lLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"8"	"P04897; Q63803"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; P29348; P08753; P38406; P04897; P10824; Q63803; P59215"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(olf) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnal PE=2 SV=2; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"758.47827"	"1515.94927"	"1515.95105"	"-1.18"	"-0.00089"	"10/82"	"10"	"82"	"12161752.5574951"	"HCD"	"MS2"	"1.681174"	"380.6"	"50.119"	"57.0811"	"17766"	"17766"	"17749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"356.9"	""	"457.7"	""	"421.3"	""	"665.9"	""	"824.6"	"895.4"	""	"433"	"65"	"33.000"	"26.000"	"6.44848806971419E-06"	"26"	"0"	"2.704E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIILGDSGVGK"	"[K].vIILGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"505.98801"	"1515.94947"	"1515.95105"	"-1.04"	"-0.00053"	"8/82"	"8"	"82"	"2318130.18859863"	"HCD"	"MS2"	"29.35962"	"81.9"	"100.000"	"51.5897"	"15488"	"15488"	"15458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.2"	""	"110.5"	""	"105.5"	""	"153.4"	"0.7"	"148.4"	"158.9"	""	"433"	"36"	"33.000"	"26.000"	"0.00515772165116157"	"23"	"0.0001308"	"0.0002521"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIILGDSGVGK"	"[K].vIILGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"758.47858"	"1515.94988"	"1515.95105"	"-0.77"	"-0.00059"	"10/82"	"10"	"82"	"3905116.04205322"	"HCD"	"MS2"	"7.405198"	"270.5"	"100.000"	"51.6792"	"15575"	"15575"	"15558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"346.3"	""	"401.3"	""	"381.3"	""	"471.0"	"2.3"	"475.3"	"484.1"	""	"419"	"48"	"33.000"	"26.000"	"0.000296608796901009"	"23"	"0"	"3.629E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGAGESGK"	"[KR].iLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"2"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"505.98816"	"1515.94992"	"1515.95105"	"-0.74"	"-0.00038"	"8/82"	"8"	"82"	"12178092.5806885"	"HCD"	"MS2"	"4.046959"	"188.0"	"65.363"	"56.9148"	"17644"	"17644"	"17627"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.4"	""	"237.9"	""	"228.9"	""	"302.8"	"1.6"	"417.9"	"407.6"	""	"419"	"59"	"33.000"	"26.000"	"2.46141037759832E-05"	"25"	"0"	"3.167E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGAGESGK"	"[KR].lLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"8"	"P04897; Q63803"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; P29348; P08753; P38406; P04897; P10824; Q63803; P59215"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(olf) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnal PE=2 SV=2; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"505.98816"	"1515.94992"	"1515.95105"	"-0.74"	"-0.00038"	"8/82"	"8"	"82"	"12178092.5806885"	"HCD"	"MS2"	"4.046959"	"188.0"	"65.363"	"56.9148"	"17644"	"17644"	"17627"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.4"	""	"237.9"	""	"228.9"	""	"302.8"	"1.6"	"417.9"	"407.6"	""	"419"	"59"	"33.000"	"26.000"	"2.46141037759832E-05"	"25"	"0"	"3.167E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIILGDSGVGK"	"[K].vIILGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.8310"	"0.0000"	"1"	"1"	"1"	"758.47864"	"1515.95000"	"1515.95105"	"-0.69"	"-0.00053"	"17/82"	"17"	"82"	"4823086.62127686"	"HCD"	"MS2"	"12.74805"	"306.3"	"100.000"	"51.1823"	"15321"	"15321"	"15298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"433.0"	""	"466.7"	""	"469.8"	""	"472.1"	""	"524.4"	"534.0"	""	"419"	"71"	"33.000"	"26.000"	"1.56021348533305E-06"	""	"0"	"1.175E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGAGESGK"	"[KR].iLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"2"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"505.98828"	"1515.95029"	"1515.95105"	"-0.50"	"-0.00025"	"8/82"	"8"	"82"	"9351754.39672852"	"HCD"	"MS2"	"5.83766"	"242.2"	"100.000"	"56.7929"	"17648"	"17648"	"17621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.2"	""	"295.2"	""	"279.6"	""	"442.9"	""	"526.9"	"511.2"	""	"419"	"62"	"33.000"	"26.000"	"1.29772905228586E-05"	"26"	"0"	"2.931E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGAGESGK"	"[KR].lLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"8"	"P04897; Q63803"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; P29348; P08753; P38406; P04897; P10824; Q63803; P59215"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(olf) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnal PE=2 SV=2; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"505.98828"	"1515.95029"	"1515.95105"	"-0.50"	"-0.00025"	"8/82"	"8"	"82"	"9351754.39672852"	"HCD"	"MS2"	"5.83766"	"242.2"	"100.000"	"56.7929"	"17648"	"17648"	"17621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.2"	""	"295.2"	""	"279.6"	""	"442.9"	""	"526.9"	"511.2"	""	"419"	"62"	"33.000"	"26.000"	"1.29772905228586E-05"	"26"	"0"	"2.931E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIILGDSGVGK"	"[K].vIILGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"758.47888"	"1515.95049"	"1515.95105"	"-0.37"	"-0.00028"	"8/82"	"8"	"82"	"3639128.18774414"	"HCD"	"MS2"	"5.104077"	"243.8"	"100.000"	"51.4889"	"15446"	"15446"	"15426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"297.6"	""	"341.4"	""	"363.8"	""	"424.6"	""	"431.4"	"451.6"	""	"418"	"50"	"33.000"	"26.000"	"0.000207083876482588"	"24"	"0"	"3.044E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGAGESGK"	"[KR].iLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"2"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"758.47894"	"1515.95061"	"1515.95105"	"-0.29"	"-0.00022"	"9/82"	"9"	"82"	"11369475.1381836"	"HCD"	"MS2"	"12.7485"	"453.6"	"63.889"	"56.9541"	"17714"	"17714"	"17685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"400.0"	""	"542.5"	""	"511.5"	""	"845.2"	""	"1036.3"	"989.6"	""	"422"	"32"	"33.000"	"26.000"	"0.0127433160798416"	"16"	"0"	"7.932E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGAGESGK"	"[KR].lLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"8"	"P04897; Q63803"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; P29348; P08753; P38406; P04897; P10824; Q63803; P59215"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(olf) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnal PE=2 SV=2; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"758.47894"	"1515.95061"	"1515.95105"	"-0.29"	"-0.00022"	"9/82"	"9"	"82"	"11369475.1381836"	"HCD"	"MS2"	"12.7485"	"453.6"	"63.889"	"56.9541"	"17714"	"17714"	"17685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"400.0"	""	"542.5"	""	"511.5"	""	"845.2"	""	"1036.3"	"989.6"	""	"422"	"32"	"33.000"	"26.000"	"0.0127433160798416"	"16"	"0"	"7.932E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTILQLNLK"	"[K].dTILQLNLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"3"	"3"	"0.5600"	"0.0000"	"1"	"1"	"1"	"505.98846"	"1515.95084"	"1515.95105"	"-0.14"	"-0.00007"	"7/74"	"7"	"74"	"8096411.97143555"	"HCD"	"MS2"	"7.336584"	"222.6"	"100.000"	"58.3109"	"18268"	"18268"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.3"	""	"301.3"	""	"307.2"	""	"367.9"	""	"427.8"	"443.6"	""	"422"	"25"	"33.000"	"26.000"	"0.0711676221270214"	"25"	"0.0001889"	"0.0007617"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGAGESGK"	"[KR].iLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"2"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"758.47906"	"1515.95085"	"1515.95105"	"-0.13"	"-0.00010"	"10/82"	"10"	"82"	"6039194.26409912"	"HCD"	"MS2"	"10.88765"	"368.5"	"100.000"	"56.7883"	"17646"	"17646"	"17621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"384.5"	""	"472.9"	""	"412.0"	""	"680.8"	"3.7"	"756.8"	"791.2"	""	"422"	"63"	"33.000"	"26.000"	"9.60024806916602E-06"	"26"	"0"	"2.174E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGAGESGK"	"[KR].lLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"8"	"P04897; Q63803"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; P29348; P08753; P38406; P04897; P10824; Q63803; P59215"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(olf) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnal PE=2 SV=2; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"758.47906"	"1515.95085"	"1515.95105"	"-0.13"	"-0.00010"	"10/82"	"10"	"82"	"6039194.26409912"	"HCD"	"MS2"	"10.88765"	"368.5"	"100.000"	"56.7883"	"17646"	"17646"	"17621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"384.5"	""	"472.9"	""	"412.0"	""	"680.8"	"3.7"	"756.8"	"791.2"	""	"422"	"63"	"33.000"	"26.000"	"9.60024806916602E-06"	"26"	"0"	"2.174E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIILGDSGVGK"	"[K].vIILGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"505.98859"	"1515.95121"	"1515.95105"	"0.10"	"0.00005"	"15/82"	"15"	"82"	"11787994.3197021"	"HCD"	"MS2"	"4.026493"	"303.9"	"100.000"	"51.4950"	"15499"	"15499"	"15478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"405.7"	""	"472.2"	""	"444.1"	""	"481.0"	"4.6"	"519.1"	"550.3"	""	"411"	"60"	"33.000"	"26.000"	"2.19690777680256E-05"	"26"	"0"	"4.916E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGAGESGK"	"[KR].iLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"2"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"758.47925"	"1515.95122"	"1515.95105"	"0.11"	"0.00008"	"9/82"	"9"	"82"	"4161696.54144287"	"HCD"	"MS2"	"54.13884"	"265.9"	"100.000"	"56.6896"	"17551"	"17551"	"17531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.5"	""	"330.3"	""	"312.0"	""	"500.7"	""	"603.9"	"547.1"	""	"411"	"12"	"33.000"	"26.000"	"1.35772503565561"	"14"	"0.0001889"	"0.0003994"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGAGESGK"	"[KR].lLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"8"	"P04897; Q63803"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; P29348; P08753; P38406; P04897; P10824; Q63803; P59215"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(olf) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnal PE=2 SV=2; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"758.47925"	"1515.95122"	"1515.95105"	"0.11"	"0.00008"	"9/82"	"9"	"82"	"4161696.54144287"	"HCD"	"MS2"	"54.13884"	"265.9"	"100.000"	"56.6896"	"17551"	"17551"	"17531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.5"	""	"330.3"	""	"312.0"	""	"500.7"	""	"603.9"	"547.1"	""	"411"	"12"	"33.000"	"26.000"	"1.35772503565561"	"14"	"0.0001889"	"0.0003994"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGAGESGK"	"[KR].iLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"2"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"758.47925"	"1515.95122"	"1515.95105"	"0.11"	"0.00008"	"10/82"	"10"	"82"	"14203494.4996338"	"HCD"	"MS2"	"0"	"570.9"	"70.112"	"56.8411"	"17613"	"17613"	"17595"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"527.5"	""	"668.1"	""	"668.0"	""	"1017.1"	""	"1244.8"	"1307.1"	""	"411"	"65"	"33.000"	"26.000"	"6.00913313646805E-06"	""	"0"	"2.588E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGAGESGK"	"[KR].lLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"8"	"P04897; Q63803"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; P29348; P08753; P38406; P04897; P10824; Q63803; P59215"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(olf) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnal PE=2 SV=2; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"758.47925"	"1515.95122"	"1515.95105"	"0.11"	"0.00008"	"10/82"	"10"	"82"	"14203494.4996338"	"HCD"	"MS2"	"0"	"570.9"	"70.112"	"56.8411"	"17613"	"17613"	"17595"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"527.5"	""	"668.1"	""	"668.0"	""	"1017.1"	""	"1244.8"	"1307.1"	""	"411"	"65"	"33.000"	"26.000"	"6.00913313646805E-06"	""	"0"	"2.588E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIILGDSGVGK"	"[K].vIILGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"505.98862"	"1515.95130"	"1515.95105"	"0.16"	"0.00008"	"15/82"	"15"	"82"	"5946412.57104492"	"HCD"	"MS2"	"7.938753"	"184.1"	"100.000"	"51.1960"	"15327"	"15327"	"15298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.1"	""	"278.8"	""	"259.0"	""	"314.7"	"4.9"	"307.8"	"332.4"	""	"411"	"60"	"33.000"	"26.000"	"2.29515397418905E-05"	"25"	"0"	"1.904E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGAGESGK"	"[KR].iLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"2"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"505.98865"	"1515.95139"	"1515.95105"	"0.22"	"0.00011"	"8/82"	"8"	"82"	"11828694.826416"	"HCD"	"MS2"	"5.135194"	"283.6"	"100.000"	"56.6203"	"17523"	"17523"	"17499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"289.7"	""	"365.0"	""	"324.3"	""	"531.2"	"1.5"	"594.5"	"589.0"	""	"410"	"62"	"33.000"	"26.000"	"1.24955063934235E-05"	"26"	"0"	"2.901E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGAGESGK"	"[KR].lLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"8"	"P04897; Q63803"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; P29348; P08753; P38406; P04897; P10824; Q63803; P59215"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(olf) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnal PE=2 SV=2; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"505.98865"	"1515.95139"	"1515.95105"	"0.22"	"0.00011"	"8/82"	"8"	"82"	"11828694.826416"	"HCD"	"MS2"	"5.135194"	"283.6"	"100.000"	"56.6203"	"17523"	"17523"	"17499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"289.7"	""	"365.0"	""	"324.3"	""	"531.2"	"1.5"	"594.5"	"589.0"	""	"410"	"62"	"33.000"	"26.000"	"1.24955063934235E-05"	"26"	"0"	"2.901E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIILGDSGVGK"	"[K].vIILGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"758.47937"	"1515.95146"	"1515.95105"	"0.27"	"0.00021"	"17/82"	"17"	"82"	"5392196.71569824"	"HCD"	"MS2"	"17.12146"	"335.7"	"100.000"	"51.3868"	"15455"	"15455"	"15430"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"468.2"	""	"545.8"	""	"492.5"	""	"531.0"	"2.4"	"564.6"	"571.9"	""	"410"	"72"	"33.000"	"26.000"	"1.43798336176094E-06"	""	"0"	"8.906E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTILQLNLK"	"[K].dTILQLNLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"505.98880"	"1515.95185"	"1515.95105"	"0.53"	"0.00027"	"7/74"	"7"	"74"	"7093877.2119751"	"HCD"	"MS2"	"7.819827"	"195.3"	"100.000"	"58.1880"	"18164"	"18164"	"18139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"242.7"	""	"265.9"	""	"289.3"	""	"312.8"	""	"360.4"	"380.8"	""	"410"	"18"	"33.000"	"26.000"	"0.361205089514384"	"17"	"0.0004166"	"0.002381"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGAGESGK"	"[KR].iLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"2"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"758.47968"	"1515.95207"	"1515.95105"	"0.68"	"0.00051"	"10/82"	"10"	"82"	"4172032.08441162"	"HCD"	"MS2"	"6.142104"	"270.5"	"100.000"	"56.5555"	"17497"	"17497"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.8"	""	"367.4"	""	"302.2"	""	"517.1"	"0.7"	"556.6"	"548.3"	""	"414"	"61"	"33.000"	"26.000"	"1.51694678359753E-05"	"26"	"0"	"2.081E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGAGESGK"	"[KR].lLLLGAGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"3"	"8"	"P04897; Q63803"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; P29348; P08753; P38406; P04897; P10824; Q63803; P59215"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(olf) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnal PE=2 SV=2; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"758.47968"	"1515.95207"	"1515.95105"	"0.68"	"0.00051"	"10/82"	"10"	"82"	"4172032.08441162"	"HCD"	"MS2"	"6.142104"	"270.5"	"100.000"	"56.5555"	"17497"	"17497"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.8"	""	"367.4"	""	"302.2"	""	"517.1"	"0.7"	"556.6"	"548.3"	""	"414"	"61"	"33.000"	"26.000"	"1.51694678359753E-05"	"26"	"0"	"2.081E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WQGNDIVVK"	"[R].wQGNDIVVk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"758.94568"	"1516.88408"	"1516.88878"	"-3.10"	"-0.00235"	"6/78"	"6"	"78"	"2566760.10723877"	"HCD"	"MS2"	"0"	"214.7"	"100.000"	"44.4518"	"12633"	"12633"	"12604"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"334.6"	""	"319.2"	""	"318.3"	""	"326.6"	""	"356.1"	"378.4"	""	"796"	"43"	"35.000"	"29.000"	"0.00207435495019822"	"25"	"0.0001308"	"0.0002099"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WQGNDIVVK"	"[R].wQGNDIVVk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"758.94647"	"1516.88567"	"1516.88878"	"-2.05"	"-0.00156"	"6/78"	"6"	"78"	"2582105.54516602"	"HCD"	"MS2"	"0"	"211.6"	"100.000"	"44.1994"	"12480"	"12480"	"12454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"338.8"	""	"309.6"	""	"310.9"	""	"311.6"	"3.2"	"365.7"	"362.0"	""	"803"	"43"	"36.000"	"29.000"	"0.0021413396053828"	"27"	"7.476E-05"	"0.0002023"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IRDLLDVSK"	"[K].iRDLLDVSk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"P56536; Q2PQA9"	"Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus OX=10116 GN=Kif5c PE=1 SV=2; Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"1"	"3"	"3"	"0.5500"	"0.0000"	"1"	"1"	"1"	"506.31946"	"1516.94382"	"1516.94630"	"-1.63"	"-0.00083"	"6/88"	"6"	"88"	"5609423.1942749"	"HCD"	"MS2"	"6.612134"	"212.9"	"100.000"	"47.0597"	"13644"	"13644"	"13624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"337.1"	""	"315.0"	""	"315.7"	""	"324.8"	""	"349.7"	"372.0"	""	"504"	"20"	"34.000"	"27.000"	"0.27252135572708"	"23"	"0.0001889"	"0.0008573"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IRDLLDVSK"	"[K].iRDLLDVSk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"P56536; Q2PQA9"	"Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus OX=10116 GN=Kif5c PE=1 SV=2; Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"1"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"506.32016"	"1516.94593"	"1516.94630"	"-0.25"	"-0.00012"	"6/88"	"6"	"88"	"6762833.08990479"	"HCD"	"MS2"	"16.99237"	"255.4"	"100.000"	"47.2977"	"13790"	"13790"	"13762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"424.7"	""	"371.1"	""	"365.2"	""	"400.7"	"1.0"	"423.6"	"428.7"	""	"488"	"32"	"33.000"	"26.000"	"0.0167259127254449"	"25"	"0.0001889"	"0.0008608"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLLAAFPK"	"[R].iEGLLAAFPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"506.32089"	"1516.94812"	"1516.95032"	"-1.45"	"-0.00073"	"6/72"	"6"	"72"	"3376633.09893799"	"HCD"	"MS2"	"30.24724"	"76.0"	"100.000"	"75.0206"	"25076"	"25076"	"25055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.5"	""	"93.3"	""	"119.1"	""	"143.4"	""	"137.0"	"139.1"	""	"479"	"37"	"33.000"	"26.000"	"0.00493520864228165"	"22"	"0"	"0.0001654"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLLAAFPK"	"[R].iEGLLAAFPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.32132"	"1516.94941"	"1516.95032"	"-0.60"	"-0.00031"	"6/72"	"6"	"72"	"2916022.12860107"	"HCD"	"MS2"	"20.12946"	"60.2"	"100.000"	"75.3373"	"25154"	"25154"	"25137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.8"	""	"75.8"	""	"89.2"	""	"101.1"	""	"116.4"	"121.1"	""	"479"	"27"	"33.000"	"26.000"	"0.0461642216709229"	"14"	"0"	"0.0001244"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLLAAFPK"	"[R].iEGLLAAFPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.32138"	"1516.94959"	"1516.95032"	"-0.48"	"-0.00024"	"6/72"	"6"	"72"	"2943606.94940186"	"HCD"	"MS2"	"18.17227"	"56.7"	"100.000"	"75.3297"	"25202"	"25202"	"25183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.3"	""	"68.9"	""	"80.0"	""	"99.1"	""	"115.2"	"112.9"	""	"479"	"32"	"33.000"	"26.000"	"0.0165693517535085"	"14"	"0"	"0.0001614"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLLAAFPK"	"[R].iEGLLAAFPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"506.32144"	"1516.94977"	"1516.95032"	"-0.36"	"-0.00018"	"7/72"	"7"	"72"	"3422175.99182129"	"HCD"	"MS2"	"27.8914"	"83.2"	"100.000"	"75.0328"	"25029"	"25029"	"25009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.4"	""	"106.4"	""	"123.1"	""	"140.2"	""	"169.1"	"148.1"	""	"479"	"31"	"33.000"	"26.000"	"0.0185911184432572"	"15"	"0"	"0.0001256"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIVEKPFGR"	"[R].iIVEkPFGR.[D]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"506.32458"	"1516.95920"	"1516.96156"	"-1.55"	"-0.00078"	"8/72"	"8"	"72"	"16598551.3797607"	"HCD"	"MS2"	"4.111994"	"434.2"	"52.426"	"41.5473"	"11452"	"11452"	"11437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"725.4"	""	"677.8"	""	"670.0"	""	"595.1"	""	"709.0"	"729.0"	""	"358"	"12"	"32.000"	"25.000"	"1.07610099009507"	"15"	"0.0001889"	"0.0007024"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIVEKPFGR"	"[R].iIVEkPFGR.[D]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"506.32498"	"1516.96039"	"1516.96156"	"-0.77"	"-0.00039"	"7/72"	"7"	"72"	"10636320.2766113"	"HCD"	"MS2"	"7.483344"	"466.4"	"89.262"	"41.3959"	"11346"	"11346"	"11328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"749.6"	""	"693.1"	""	"728.9"	""	"673.7"	""	"752.8"	"815.0"	""	"348"	"12"	"32.000"	"25.000"	"1.0778274706336"	"15"	"0.0001889"	"0.0006155"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPISADAK"	"[R].kPISADAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"758.98523"	"1516.96318"	"1516.96659"	"-2.25"	"-0.00170"	"12/74"	"12"	"74"	"4332236.76245117"	"HCD"	"MS2"	"0"	"322.8"	"100.000"	"28.3850"	"6108"	"6108"	"6086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.0"	""	"429.0"	""	"391.3"	""	"517.9"	"4.7"	"606.0"	"686.6"	""	"317"	"31"	"32.000"	"25.000"	"0.0113247667682969"	""	"0.0004166"	"0.002277"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKDTPQK"	"[R].lkDTPQk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.32617"	"1516.96396"	"1516.96659"	"-1.73"	"-0.00088"	"5/60"	"5"	"60"	"26516194.4630737"	"HCD"	"MS2"	"17.69465"	"1233.3"	"69.030"	"29.3290"	"6457"	"6457"	"6439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1825.5"	""	"1565.7"	""	"1524.2"	""	"2029.2"	""	"2351.6"	"2396.1"	""	"319"	"5"	"32.000"	"25.000"	"5.62031539312767"	"13"	"0.003286"	"0.07043"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPISADAK"	"[R].kPISADAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"506.32620"	"1516.96405"	"1516.96659"	"-1.67"	"-0.00085"	"5/74"	"5"	"74"	"8373950.18634033"	"HCD"	"MS2"	"33.25449"	"612.6"	"100.000"	"28.5626"	"6131"	"6131"	"6126"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"766.5"	""	"762.7"	""	"773.5"	""	"1071.9"	"25.8"	"1123.7"	"1286.7"	""	"319"	"23"	"32.000"	"25.000"	"0.0722371639946275"	"18"	"0.0001859"	"0.000342"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPISADAK"	"[R].kPISADAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"506.32635"	"1516.96451"	"1516.96659"	"-1.37"	"-0.00069"	"5/74"	"5"	"74"	"8744565.80285645"	"HCD"	"MS2"	"51.18066"	"553.3"	"91.009"	"28.6351"	"6199"	"6199"	"6194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"702.4"	""	"667.8"	""	"705.4"	""	"971.6"	"13.6"	"1040.8"	"1147.2"	""	"319"	"26"	"32.000"	"25.000"	"0.0427327347808636"	"19"	"0.0001889"	"0.00102"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPISADAK"	"[R].kPISADAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.32651"	"1516.96497"	"1516.96659"	"-1.07"	"-0.00054"	"6/74"	"6"	"74"	"57064518.8035889"	"HCD"	"MS2"	"5.955279"	"2405.6"	"67.365"	"28.2646"	"6023"	"6023"	"6008"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3162.1"	""	"3103.7"	""	"3002.5"	""	"3880.5"	""	"4600.3"	"5265.0"	""	"319"	"18"	"32.000"	"25.000"	"0.230017398568217"	"14"	"0.0001889"	"0.001097"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKDTPQK"	"[R].lkDTPQk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.32654"	"1516.96506"	"1516.96659"	"-1.01"	"-0.00051"	"5/60"	"5"	"60"	"27036440.2276001"	"HCD"	"MS2"	"8.66573"	"1419.3"	"84.053"	"29.2732"	"6393"	"6393"	"6374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2074.3"	""	"1860.2"	""	"1758.0"	""	"2323.4"	""	"2624.6"	"2820.7"	""	"319"	"5"	"32.000"	"25.000"	"5.39213413748541"	"13"	"0.002829"	"0.04832"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPISADAK"	"[R].kPISADAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.32654"	"1516.96506"	"1516.96659"	"-1.01"	"-0.00051"	"6/74"	"6"	"74"	"53413250.6763916"	"HCD"	"MS2"	"4.286309"	"3051.9"	"90.123"	"28.3438"	"6091"	"6091"	"6071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4007.5"	""	"3923.9"	""	"3862.5"	""	"4912.0"	""	"5848.8"	"6641.0"	""	"319"	"18"	"32.000"	"25.000"	"0.237553091894891"	"14"	"0.0001889"	"0.001012"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPISADAK"	"[R].kPISADAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"758.98627"	"1516.96526"	"1516.96659"	"-0.88"	"-0.00067"	"5/74"	"5"	"74"	"4265354.25738525"	"HCD"	"MS2"	"0"	"319.1"	"100.000"	"28.3126"	"6043"	"6043"	"6020"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"402.3"	""	"387.8"	""	"396.6"	""	"524.5"	""	"608.8"	"713.5"	""	"319"	"33"	"32.000"	"25.000"	"0.00842870176581413"	""	"0.0003839"	"0.00155"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLVK"	"[R].kLNDLVk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"759.00421"	"1517.00115"	"1517.00298"	"-1.21"	"-0.00091"	"12/60"	"12"	"60"	"3231365.30755615"	"HCD"	"MS2"	"15.63054"	"259.0"	"100.000"	"36.2487"	"9238"	"9238"	"9210"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.9"	""	"360.4"	""	"356.6"	""	"434.6"	""	"459.4"	"481.5"	""	"174"	"31"	"29.000"	"22.000"	"0.00703913432285192"	""	"0.005323"	"0.1643"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLVK"	"[R].kLNDLVk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"2"	"2"	"0.3793"	"0.0000"	"1"	"1"	"1"	"759.00439"	"1517.00151"	"1517.00298"	"-0.96"	"-0.00073"	"12/60"	"12"	"60"	"3574124.19000244"	"HCD"	"MS2"	"20.9166"	"281.7"	"100.000"	"36.3426"	"9320"	"9320"	"9289"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"382.5"	""	"405.9"	""	"376.4"	""	"459.2"	""	"513.0"	"534.2"	""	"174"	"29"	"29.000"	"22.000"	"0.0101980996802687"	""	"0.003137"	"0.06363"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLVK"	"[R].kLNDLVk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"506.33878"	"1517.00177"	"1517.00298"	"-0.79"	"-0.00040"	"10/60"	"10"	"60"	"91145158.0959473"	"HCD"	"MS2"	"7.845758"	"1673.6"	"28.634"	"36.2258"	"9228"	"9228"	"9210"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2281.0"	""	"2457.0"	""	"2202.9"	""	"2847.6"	""	"2982.0"	"3090.1"	""	"160"	"13"	"29.000"	"22.000"	"0.406527554048449"	"19"	"0.0006037"	"0.004815"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLVK"	"[R].kLNDLVk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"506.33884"	"1517.00196"	"1517.00298"	"-0.67"	"-0.00034"	"10/60"	"10"	"60"	"98226647.9567871"	"HCD"	"MS2"	"5.735215"	"1483.2"	"24.772"	"36.3128"	"9307"	"9307"	"9289"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2049.9"	""	"2205.3"	""	"1985.0"	""	"2384.1"	""	"2682.4"	"2751.2"	""	"160"	"14"	"29.000"	"22.000"	"0.35163329235026"	"19"	"0.0006037"	"0.005805"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHTITTSYYR"	"[R].fHTITTSYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"506.60248"	"1517.79288"	"1517.79499"	"-1.39"	"-0.00070"	"8/80"	"8"	"80"	"21454839.0015259"	"HCD"	"MS2"	"26.91415"	"162.6"	"64.292"	"34.4489"	"8542"	"8542"	"8522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.0"	""	"227.4"	""	"243.5"	""	"257.4"	""	"304.7"	"295.9"	""	"768"	"32"	"35.000"	"28.000"	"0.0229261550048193"	"23"	"0.0003571"	"0.001507"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHTITTSYYR"	"[R].fHTITTSYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"759.40063"	"1517.79399"	"1517.79499"	"-0.66"	"-0.00050"	"9/80"	"9"	"80"	"642444.20690918"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"34.4714"	"8552"	"8552"	"8522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.4"	""	"48.4"	""	"57.3"	""	"67.3"	""	"72.2"	"52.9"	""	"782"	"35"	"35.000"	"28.000"	"0.0111989358623347"	"19"	"0"	"4.611E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHTITTSYYR"	"[R].fHTITTSYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"506.60294"	"1517.79425"	"1517.79499"	"-0.49"	"-0.00025"	"8/80"	"8"	"80"	"19267463.1672363"	"HCD"	"MS2"	"28.31797"	"227.0"	"100.000"	"34.3892"	"8475"	"8475"	"8451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"299.6"	""	"312.7"	""	"331.6"	""	"359.6"	"1.0"	"442.4"	"404.7"	""	"782"	"30"	"35.000"	"28.000"	"0.0350087623329891"	"22"	"0.0001889"	"0.000665"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHTITTSYYR"	"[R].fHTITTSYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"759.40155"	"1517.79582"	"1517.79499"	"0.55"	"0.00041"	"9/80"	"9"	"80"	"492023.024169922"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"34.4395"	"8496"	"8496"	"8467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.5"	""	"40.6"	""	"50.4"	""	"53.9"	""	"51.5"	"49.1"	""	"813"	"35"	"36.000"	"29.000"	"0.0122761037434342"	"24"	"7.476E-05"	"0.0001991"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HYGGLTGLNK"	"[R].hYGGLTGLNk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"506.63159"	"1517.88022"	"1517.88403"	"-2.51"	"-0.00127"	"8/74"	"8"	"74"	"34440702.0603027"	"HCD"	"MS2"	"5.602372"	"308.1"	"27.005"	"33.0358"	"7932"	"7932"	"7912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"448.3"	""	"371.9"	""	"390.7"	""	"524.8"	""	"532.1"	"656.3"	""	"926"	"56"	"36.000"	"29.000"	"0.000117106497235456"	"20"	"0"	"0.0001266"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HYGGLTGLNK"	"[R].hYGGLTGLNk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"506.63202"	"1517.88150"	"1517.88403"	"-1.67"	"-0.00084"	"8/74"	"8"	"74"	"32723193.5297852"	"HCD"	"MS2"	"6.900218"	"612.9"	"61.087"	"33.0898"	"7997"	"7997"	"7974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"920.8"	""	"734.0"	""	"758.6"	""	"1063.5"	"3.5"	"1008.5"	"1317.5"	""	"936"	"53"	"36.000"	"29.000"	"0.000243919124797178"	"19"	"0"	"5.558E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTILPPMEK"	"[R].mTILPPMEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"759.44574"	"1517.88420"	"1517.88356"	"0.42"	"0.00032"	"7/76"	"7"	"76"	"1442439.77386475"	"HCD"	"MS2"	"0"	"113.4"	"100.000"	"55.0763"	"16946"	"16946"	"16917"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.7"	""	"143.2"	""	"165.3"	""	"155.6"	""	"218.4"	"233.8"	""	"910"	"21"	"36.000"	"29.000"	"0.374982842330916"	"21"	"0.0003146"	"0.00145"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSDVLHTIK"	"[K].fSDVLHTIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.64172"	"1517.91062"	"1517.90919"	"0.94"	"0.00048"	"8/74"	"8"	"74"	"10975438.5463867"	"HCD"	"MS2"	"45.92117"	"366.8"	"100.000"	"47.8412"	"14012"	"14012"	"13986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"403.7"	""	"408.2"	""	"467.0"	""	"598.4"	""	"742.6"	"869.2"	""	"718"	"13"	"35.000"	"28.000"	"1.72224308060572"	"13"	"0.0003146"	"0.001439"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDAYGLLGVLR"	"[K].vLDAYGLLGVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"759.46619"	"1517.92510"	"1517.92528"	"-0.12"	"-0.00009"	"9/88"	"9"	"88"	"546816.08972168"	"HCD"	"MS2"	"59.66211"	"28.1"	"100.000"	"82.6382"	"28121"	"28121"	"28096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.2"	""	"40.5"	""	"43.5"	""	"43.3"	"0.3"	"53.4"	"52.2"	""	"634"	"23"	"35.000"	"28.000"	"0.168678318187574"	"22"	"0"	"0.0001421"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLIGTIFHK"	"[K].mLIGTIFHk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"506.64694"	"1517.92627"	"1517.92781"	"-1.01"	"-0.00051"	"7/64"	"7"	"64"	"5520687.78997803"	"HCD"	"MS2"	"12.0515"	"169.8"	"100.000"	"56.4679"	"17515"	"17515"	"17493"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"210.9"	""	"267.8"	""	"325.8"	""	"227.8"	"2.1"	"277.4"	"294.0"	""	"627"	"51"	"34.000"	"27.000"	"0.000267446885744514"	"21"	"0"	"7.033E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLIGTIFHK"	"[K].mLIGTIFHk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.8039"	"0.0000"	"1"	"1"	"1"	"506.64734"	"1517.92746"	"1517.92781"	"-0.23"	"-0.00012"	"7/64"	"7"	"64"	"5156157.94360352"	"HCD"	"MS2"	"13.91404"	"159.6"	"100.000"	"56.2717"	"17381"	"17381"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.8"	""	"265.2"	""	"296.1"	""	"200.0"	""	"268.1"	"301.0"	""	"634"	"51"	"35.000"	"28.000"	"0.000270432736143576"	"25"	"0"	"6.76E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQEIASLSK"	"[K].iAQEIASLSk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62796"	"RalA-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ralbp1 PE=1 SV=3"	"Q62796"	"RalA-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ralbp1 PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"759.46893"	"1517.93059"	"1517.93031"	"0.18"	"0.00014"	"9/96"	"9"	"96"	"1228339.4119873"	"HCD"	"MS2"	"0"	"102.0"	"100.000"	"56.6317"	"17582"	"17582"	"17557"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.3"	""	"120.8"	""	"130.7"	""	"203.7"	"0.6"	"170.0"	"199.3"	""	"620"	"21"	"34.000"	"27.000"	"0.228224200223368"	"23"	"0"	"4.911E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGFVASPLLK"	"[R].gAGFVASPLLk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50430"	"Arylsulfatase B OS=Rattus norvegicus OX=10116 GN=Arsb PE=2 SV=2"	"P50430"	"Arylsulfatase B OS=Rattus norvegicus OX=10116 GN=Arsb PE=2 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"506.65271"	"1517.94358"	"1517.94557"	"-1.31"	"-0.00066"	"13/80"	"13"	"80"	"7152958.26654053"	"HCD"	"MS2"	"35.86564"	"247.6"	"100.000"	"52.5262"	"15871"	"15871"	"15842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.8"	""	"359.3"	""	"361.9"	""	"402.3"	""	"480.4"	"414.6"	""	"489"	"20"	"33.000"	"26.000"	"0.266243407820024"	"14"	"0.0001889"	"0.0007578"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGFVASPLLK"	"[R].gAGFVASPLLk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50430"	"Arylsulfatase B OS=Rattus norvegicus OX=10116 GN=Arsb PE=2 SV=2"	"P50430"	"Arylsulfatase B OS=Rattus norvegicus OX=10116 GN=Arsb PE=2 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"759.47589"	"1517.94451"	"1517.94557"	"-0.70"	"-0.00053"	"9/80"	"9"	"80"	"2400017.35058594"	"HCD"	"MS2"	"0"	"194.2"	"100.000"	"52.4456"	"15838"	"15838"	"15810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.5"	""	"323.1"	""	"266.1"	""	"296.7"	""	"369.1"	"316.1"	""	"479"	"46"	"33.000"	"26.000"	"0.000656607014176728"	"25"	"0"	"9.3E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGFVASPLLK"	"[R].gAGFVASPLLk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50430"	"Arylsulfatase B OS=Rattus norvegicus OX=10116 GN=Arsb PE=2 SV=2"	"P50430"	"Arylsulfatase B OS=Rattus norvegicus OX=10116 GN=Arsb PE=2 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"759.47644"	"1517.94560"	"1517.94557"	"0.02"	"0.00002"	"9/80"	"9"	"80"	"2389299.07318115"	"HCD"	"MS2"	"0"	"190.8"	"100.000"	"52.6370"	"15966"	"15966"	"15942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.4"	""	"309.6"	""	"271.8"	""	"299.9"	""	"379.5"	"273.9"	""	"472"	"60"	"33.000"	"26.000"	"2.16726492770125E-05"	"24"	"0"	"6.724E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFFDVGSNK"	"[R].fFFDVGSNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"506.94986"	"1518.83503"	"1518.83569"	"-0.43"	"-0.00022"	"9/72"	"9"	"72"	"5404357.15869141"	"HCD"	"MS2"	"24.81944"	"166.2"	"100.000"	"62.2287"	"19810"	"19810"	"19785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.2"	""	"191.3"	""	"212.6"	""	"323.8"	""	"312.5"	"337.6"	""	"1068"	"29"	"37.000"	"30.000"	"0.0614527407696328"	"17"	"0.0001889"	"0.0009346"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFFDVGSNK"	"[R].fFFDVGSNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"506.95010"	"1518.83576"	"1518.83569"	"0.05"	"0.00002"	"9/72"	"9"	"72"	"4372906.52044678"	"HCD"	"MS2"	"47.20325"	"131.0"	"100.000"	"62.3306"	"19905"	"19905"	"19875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.6"	""	"142.8"	""	"162.3"	""	"259.3"	""	"232.8"	"276.4"	""	"1047"	"33"	"37.000"	"30.000"	"0.0253464234430276"	"23"	"0.0001889"	"0.0005739"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFFDVGSNK"	"[R].fFFDVGSNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"759.92163"	"1518.83599"	"1518.83569"	"0.20"	"0.00015"	"8/72"	"8"	"72"	"5393392.37127686"	"HCD"	"MS2"	"43.95168"	"440.2"	"100.000"	"62.2195"	"19806"	"19806"	"19785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"543.4"	""	"506.8"	""	"553.2"	""	"880.0"	"1.0"	"784.6"	"905.1"	""	"1047"	"35"	"37.000"	"30.000"	"0.0159557302707025"	"20"	"0.0001308"	"0.0002968"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFFDVGSNK"	"[R].fFFDVGSNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"759.92175"	"1518.83623"	"1518.83569"	"0.36"	"0.00027"	"8/72"	"8"	"72"	"5507885.56085205"	"HCD"	"MS2"	"39.76579"	"433.5"	"100.000"	"62.3471"	"19911"	"19911"	"19891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"548.9"	""	"500.8"	""	"539.3"	""	"864.7"	""	"771.8"	"886.2"	""	"1041"	"36"	"37.000"	"30.000"	"0.0128062133795884"	"21"	"0.0001308"	"0.0002218"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLEYVPSAK"	"[R].gPLEYVPSAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"759.94922"	"1518.89116"	"1518.89320"	"-1.34"	"-0.00102"	"8/80"	"8"	"80"	"4917455.88781738"	"HCD"	"MS2"	"60.16331"	"279.2"	"100.000"	"44.9057"	"12816"	"12816"	"12799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"420.9"	""	"401.0"	""	"410.8"	""	"393.5"	"2.6"	"516.8"	"498.6"	""	"949"	"26"	"36.000"	"29.000"	"0.109960376141004"	"21"	"0.0001308"	"0.0002299"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPIQGFSAK"	"[K].vNPIQGFSAk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"759.95490"	"1518.90251"	"1518.90443"	"-1.26"	"-0.00096"	"9/88"	"9"	"88"	"5110893.74853516"	"HCD"	"MS2"	"49.94281"	"244.5"	"100.000"	"45.2185"	"12944"	"12944"	"12923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"378.8"	""	"393.8"	""	"373.9"	""	"366.8"	"1.7"	"377.1"	"419.4"	""	"863"	"32"	"36.000"	"29.000"	"0.025643706644262"	"19"	"0"	"0.0001178"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPIQGFSAK"	"[K].vNPIQGFSAk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"1"	"759.95502"	"1518.90276"	"1518.90443"	"-1.10"	"-0.00084"	"6/88"	"6"	"88"	"1367425.16778564"	"HCD"	"MS2"	"47.75077"	"114.7"	"100.000"	"45.2759"	"12968"	"12968"	"12939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.5"	""	"150.6"	""	"171.4"	""	"196.8"	"1.3"	"186.5"	"211.1"	""	"875"	"0"	"36.000"	"29.000"	"40.4555451097972"	"13"	"0.001217"	"0.01827"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPIQGFSAK"	"[K].vNPIQGFSAk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"506.97253"	"1518.90305"	"1518.90443"	"-0.91"	"-0.00046"	"10/88"	"10"	"88"	"7363787.68029785"	"HCD"	"MS2"	"13.21242"	"234.1"	"100.000"	"45.1723"	"12925"	"12925"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.3"	""	"353.1"	""	"378.5"	""	"344.9"	"9.6"	"391.7"	"409.5"	""	"875"	"39"	"36.000"	"29.000"	"0.00524780945127853"	"23"	"0.0001308"	"0.0002833"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPIQGFSAK"	"[K].vNPIQGFSAk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.95587"	"1518.90447"	"1518.90443"	"0.02"	"0.00002"	"8/88"	"8"	"88"	"7738765.48754883"	"HCD"	"MS2"	"38.3854"	"402.6"	"100.000"	"44.9083"	"12769"	"12769"	"12752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"607.4"	""	"661.8"	""	"611.1"	""	"601.2"	""	"613.9"	"715.8"	""	"856"	"33"	"36.000"	"29.000"	"0.0197443921911843"	"15"	"0"	"8.066E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPIQGFSAK"	"[K].vNPIQGFSAk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"506.97311"	"1518.90479"	"1518.90443"	"0.23"	"0.00012"	"10/88"	"10"	"88"	"6935743.0524292"	"HCD"	"MS2"	"12.88595"	"226.5"	"100.000"	"44.9266"	"12776"	"12776"	"12752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.2"	""	"347.5"	""	"367.7"	""	"314.7"	"6.6"	"378.6"	"413.3"	""	"853"	"36"	"36.000"	"29.000"	"0.0106149764624744"	"17"	"0"	"0.0001681"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFLQPGSQR"	"[K].kFLQPGSQR.[KQ]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"6"	"P14942; P04904"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2;Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; Q6AXY0; P14942; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"1"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"506.97595"	"1518.91330"	"1518.91567"	"-1.56"	"-0.00079"	"5/80"	"5"	"80"	"60621067.5061035"	"HCD"	"MS2"	"27.19744"	"683.1"	"26.426"	"29.6493"	"6547"	"6547"	"6528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1067.1"	""	"920.5"	""	"989.2"	""	"1083.1"	"4.0"	"1108.0"	"1291.6"	""	"773"	"9"	"35.000"	"28.000"	"4.77693683026304"	"20"	"0.0006037"	"0.005019"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFLQPGSQR"	"[K].kFLQPGSQR.[KQ]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"6"	"P14942; P04904"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2;Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; Q6AXY0; P14942; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"1"	"2"	"2"	"0.0714"	"0.0000"	"1"	"1"	"1"	"759.96112"	"1518.91496"	"1518.91567"	"-0.46"	"-0.00035"	"7/80"	"7"	"80"	"1025636.7890625"	"HCD"	"MS2"	"0"	"60.1"	"100.000"	"29.6844"	"6603"	"6603"	"6576"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.9"	""	"82.2"	""	"93.6"	""	"104.3"	"2.3"	"82.2"	"99.2"	""	"751"	"14"	"35.000"	"28.000"	"1.39511478525988"	"27"	"0.00103"	"0.01263"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFLQPGSQR"	"[K].kFLQPGSQR.[KQ]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"6"	"P14942; P04904"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2;Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; Q6AXY0; P14942; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"1"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"506.97656"	"1518.91513"	"1518.91567"	"-0.35"	"-0.00018"	"5/80"	"5"	"80"	"41248130.7611084"	"HCD"	"MS2"	"32.61295"	"1351.3"	"72.716"	"29.6914"	"6606"	"6606"	"6589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2093.0"	""	"1792.9"	""	"1874.6"	""	"2182.5"	"9.3"	"2225.5"	"2612.7"	""	"751"	"7"	"35.000"	"28.000"	"7.23785604903197"	"17"	"0.000494"	"0.00274"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFLQPGSQR"	"[K].kFLQPGSQR.[KQ]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"6"	"P14942; P04904"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2;Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; Q6AXY0; P14942; P04904; P46418; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase A6 OS=Rattus norvegicus OX=10116 GN=Gsta6 PE=1 SV=1; Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"1"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"759.96143"	"1518.91557"	"1518.91567"	"-0.06"	"-0.00005"	"6/80"	"6"	"80"	"1191936.9286499"	"HCD"	"MS2"	"0"	"74.5"	"100.000"	"29.6378"	"6543"	"6543"	"6512"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.0"	""	"100.3"	""	"104.2"	""	"127.0"	""	"116.6"	"133.5"	""	"796"	"22"	"35.000"	"29.000"	"0.23598427918284"	"16"	"0.005102"	"0.1549"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLVGFIPLLR"	"[K].fDLVGFIPLLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.96588"	"1518.92449"	"1518.92455"	"-0.04"	"-0.00003"	"6/80"	"6"	"80"	"162503.037109375"	"HCD"	"MS2"	"21.45987"	"7.6"	"100.000"	"98.8237"	"33839"	"33839"	"33836"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"9.8"	""	"11.7"	""	"14.4"	""	"15.1"	"14.0"	""	"602"	"28"	"34.000"	"27.000"	"0.05303547899699"	"14"	"0.0001308"	"0.0002386"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLVGFIPLLR"	"[K].fDLVGFIPLLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.96619"	"1518.92510"	"1518.92455"	"0.36"	"0.00027"	"6/80"	"6"	"80"	"182324.975036621"	"HCD"	"MS2"	"25.47383"	"9.7"	"100.000"	"98.6408"	"33787"	"33787"	"33783"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.8"	""	"10.6"	""	"15.4"	""	"17.9"	""	"19.7"	"18.8"	""	"612"	"20"	"34.000"	"27.000"	"0.309543313003529"	"14"	"0.0001308"	"0.0002609"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLPSVPGLLK"	"[R].hLPSVPGLLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"506.99619"	"1518.97400"	"1518.97721"	"-2.11"	"-0.00107"	"10/72"	"10"	"72"	"3564526.81817627"	"HCD"	"MS2"	"0"	"115.3"	"100.000"	"46.2592"	"13317"	"13317"	"13288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.6"	""	"152.7"	""	"147.7"	""	"200.7"	""	"221.2"	"253.0"	""	"338"	"27"	"32.000"	"25.000"	"0.0353091046114332"	"15"	"0.0002277"	"0.001203"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLPSVPGLLK"	"[R].hLPSVPGLLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.99673"	"1518.97565"	"1518.97721"	"-1.02"	"-0.00052"	"10/72"	"10"	"72"	"6907275.08166504"	"HCD"	"MS2"	"36.20905"	"264.4"	"100.000"	"46.8126"	"13591"	"13591"	"13570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"364.0"	""	"335.8"	""	"366.3"	""	"447.2"	"8.4"	"492.7"	"491.2"	""	"323"	"26"	"32.000"	"25.000"	"0.0393706447166553"	"14"	"0.0005564"	"0.00334"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLPSVPGLLK"	"[R].hLPSVPGLLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"506.99695"	"1518.97629"	"1518.97721"	"-0.60"	"-0.00030"	"12/72"	"12"	"72"	"4139950.37109375"	"HCD"	"MS2"	"34.88678"	"134.4"	"100.000"	"46.5164"	"13470"	"13470"	"13443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.5"	""	"182.2"	""	"179.2"	""	"232.9"	""	"253.7"	"295.7"	""	"277"	"43"	"31.000"	"24.000"	"0.000649306534271192"	"16"	"0.0001859"	"0.0003622"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLPSVPGLLK"	"[R].hLPSVPGLLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.99744"	"1518.97776"	"1518.97721"	"0.36"	"0.00018"	"9/72"	"9"	"72"	"5753524.80114746"	"HCD"	"MS2"	"53.78967"	"235.8"	"100.000"	"46.5690"	"13444"	"13444"	"13416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"307.7"	""	"286.0"	""	"326.2"	"2.9"	"414.1"	"12.5"	"437.8"	"447.2"	""	"275"	"20"	"31.000"	"24.000"	"0.123112655263069"	"14"	"0.000494"	"0.002655"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTVVAEK"	"[R].kGTVVAEk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"1"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"506.99796"	"1518.97931"	"1518.98224"	"-1.93"	"-0.00098"	"6/78"	"6"	"78"	"19226963.2901611"	"HCD"	"MS2"	"20.75229"	"1125.3"	"100.000"	"28.1033"	"5993"	"5993"	"5969"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2228.2"	""	"1397.9"	""	"1431.6"	""	"1717.1"	""	"1955.9"	"1915.1"	""	"270"	"17"	"31.000"	"24.000"	"0.247362447020114"	"16"	"0.0001889"	"0.001108"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTVVAEK"	"[R].kGTVVAEk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"1"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"506.99805"	"1518.97959"	"1518.98224"	"-1.75"	"-0.00088"	"7/78"	"7"	"78"	"16405555.2780762"	"HCD"	"MS2"	"14.4534"	"952.4"	"98.232"	"28.0495"	"5936"	"5936"	"5916"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1908.0"	""	"1204.1"	""	"1228.0"	""	"1390.7"	"0.5"	"1622.6"	"1651.4"	""	"267"	"22"	"31.000"	"24.000"	"0.07915553083143"	"16"	"0.0001889"	"0.0005555"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTVVAEK"	"[R].kGTVVAEk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"1"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"759.99402"	"1518.98076"	"1518.98224"	"-0.97"	"-0.00074"	"11/78"	"11"	"78"	"775011.179077148"	"HCD"	"MS2"	"0"	"69.1"	"100.000"	"28.1468"	"6011"	"6011"	"5985"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.7"	""	"83.8"	""	"96.9"	""	"98.1"	"0.6"	"114.7"	"119.3"	""	"267"	"29"	"31.000"	"24.000"	"0.0179259122311905"	"22"	"0.0003839"	"0.001754"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTVVAEK"	"[R].kGTVVAEk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"1"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"759.99408"	"1518.98088"	"1518.98224"	"-0.89"	"-0.00068"	"7/78"	"7"	"78"	"1019189.74597168"	"HCD"	"MS2"	"0"	"86.7"	"100.000"	"28.0630"	"5942"	"5942"	"5916"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.6"	""	"102.1"	""	"98.8"	""	"131.1"	"2.3"	"146.6"	"141.5"	""	"267"	"31"	"31.000"	"24.000"	"0.0102915613120102"	"23"	"0.0003839"	"0.001565"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQALKPK"	"[K].fQALkPk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.00369"	"1518.99652"	"1518.99750"	"-0.64"	"-0.00032"	"7/60"	"7"	"60"	"155079204.844238"	"HCD"	"MS2"	"45.72313"	"868.8"	"8.318"	"36.6520"	"9447"	"9447"	"9431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1193.9"	""	"1100.9"	""	"1271.7"	""	"1465.7"	""	"1582.2"	"1627.1"	""	"207"	"4"	"30.000"	"23.000"	"3.75785786687055"	"13"	"0.0009404"	"0.01016"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQALKPK"	"[K].fQALkPk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.00397"	"1518.99735"	"1518.99750"	"-0.10"	"-0.00005"	"7/60"	"7"	"60"	"138701486.444336"	"HCD"	"MS2"	"43.03002"	"1162.0"	"11.840"	"36.5721"	"9371"	"9371"	"9354"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1549.7"	""	"1446.0"	""	"1705.6"	""	"1939.9"	""	"2163.0"	"2217.1"	""	"207"	"4"	"30.000"	"23.000"	"4.12990773944817"	"13"	"0.0008731"	"0.00851"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEFFSAFK"	"[K].eGEFFSAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"760.41272"	"1519.81816"	"1519.81970"	"-1.01"	"-0.00077"	"7/74"	"7"	"74"	"1534880.13897705"	"HCD"	"MS2"	"18.21348"	"134.0"	"100.000"	"58.7135"	"18429"	"18429"	"18405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.1"	""	"170.5"	""	"185.8"	""	"198.7"	"0.0"	"267.0"	"275.6"	""	"1037"	"10"	"37.000"	"30.000"	"5.17307483091994"	"22"	"0.0001859"	"0.0003557"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEFFSAFK"	"[K].eGEFFSAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.27768"	"1519.81849"	"1519.81970"	"-0.80"	"-0.00041"	"6/74"	"6"	"74"	"6775490.51647949"	"HCD"	"MS2"	"75.0458"	"260.2"	"100.000"	"58.3371"	"18225"	"18225"	"18203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"330.9"	""	"391.5"	""	"417.4"	""	"390.0"	""	"431.6"	"507.2"	""	"1039"	"7"	"37.000"	"30.000"	"9.28080295135641"	"13"	"0.0003839"	"0.001596"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEFFSAFK"	"[K].eGEFFSAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"760.41315"	"1519.81902"	"1519.81970"	"-0.45"	"-0.00034"	"7/74"	"7"	"74"	"1739248.97137451"	"HCD"	"MS2"	"28.8195"	"145.9"	"100.000"	"58.5277"	"18303"	"18303"	"18281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.6"	""	"184.3"	""	"199.6"	""	"222.7"	""	"289.9"	"292.6"	""	"1045"	"12"	"37.000"	"30.000"	"3.4760522411541"	"18"	"0.0001889"	"0.0005234"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEFFSAFK"	"[K].eGEFFSAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"760.41327"	"1519.81926"	"1519.81970"	"-0.29"	"-0.00022"	"8/74"	"8"	"74"	"6597642.40759277"	"HCD"	"MS2"	"12.5049"	"590.0"	"100.000"	"58.3844"	"18298"	"18298"	"18277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"898.0"	""	"846.0"	""	"810.3"	""	"896.1"	"5.5"	"1025.9"	"1105.0"	""	"1038"	"48"	"37.000"	"30.000"	"0.000748457867441407"	"21"	"0"	"0.0001676"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEFFSAFK"	"[K].eGEFFSAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"760.41327"	"1519.81926"	"1519.81970"	"-0.29"	"-0.00022"	"8/74"	"8"	"74"	"6331469.54144287"	"HCD"	"MS2"	"17.79064"	"577.4"	"100.000"	"58.2158"	"18175"	"18175"	"18155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"882.5"	""	"826.4"	""	"759.8"	""	"934.6"	"2.9"	"1003.9"	"1056.7"	""	"1038"	"46"	"37.000"	"30.000"	"0.0012887460816484"	"22"	"0.0001308"	"0.0002109"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEFFSAFK"	"[K].eGEFFSAFk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.27798"	"1519.81940"	"1519.81970"	"-0.20"	"-0.00010"	"10/74"	"10"	"74"	"8147725.5480957"	"HCD"	"MS2"	"18.29388"	"248.5"	"100.000"	"58.5061"	"18348"	"18348"	"18325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.8"	""	"373.2"	"2.6"	"372.1"	""	"379.2"	"6.5"	"431.9"	"445.2"	""	"1037"	"15"	"37.000"	"30.000"	"1.79783056959638"	"14"	"0.0004557"	"0.00257"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDIK"	"[R].iMQWQDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"760.43811"	"1519.86894"	"1519.87069"	"-1.15"	"-0.00087"	"7/66"	"7"	"66"	"7885987.11682129"	"HCD"	"MS2"	"0"	"633.1"	"100.000"	"55.1300"	"16914"	"16914"	"16891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1446.4"	""	"1195.6"	""	"899.6"	""	"724.5"	""	"848.4"	"849.6"	""	"917"	"38"	"36.000"	"29.000"	"0.00735088011631384"	"29"	"0.0001889"	"0.001034"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDIK"	"[R].iMQWQDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.5641"	"0.0000"	"1"	"1"	"1"	"760.43860"	"1519.86992"	"1519.87069"	"-0.51"	"-0.00039"	"14/66"	"14"	"66"	"10625872.4133301"	"HCD"	"MS2"	"0"	"802.1"	"100.000"	"55.3381"	"17053"	"17053"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1824.2"	""	"1545.8"	""	"1165.9"	""	"879.0"	"8.1"	"1052.1"	"1079.9"	""	"924"	"39"	"36.000"	"29.000"	"0.0051956749797272"	""	"0.0001889"	"0.0008956"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDIK"	"[R].iMQWQDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"760.43866"	"1519.87004"	"1519.87069"	"-0.43"	"-0.00032"	"7/66"	"7"	"66"	"9940273.35614014"	"HCD"	"MS2"	"8.078717"	"473.0"	"64.069"	"55.6419"	"17177"	"17177"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"970.2"	""	"834.7"	""	"710.4"	""	"545.7"	""	"698.5"	"703.2"	""	"924"	"35"	"36.000"	"29.000"	"0.0131414103164094"	"28"	"0.0001889"	"0.0008462"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDIK"	"[R].iMQWQDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.4231"	"0.0000"	"1"	"1"	"1"	"507.29495"	"1519.87030"	"1519.87069"	"-0.25"	"-0.00013"	"10/66"	"10"	"66"	"10885368.5844727"	"HCD"	"MS2"	"19.65354"	"298.6"	"100.000"	"55.1872"	"16938"	"16938"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"622.0"	""	"547.5"	""	"440.6"	""	"355.0"	""	"430.0"	"422.1"	""	"921"	"26"	"36.000"	"29.000"	"0.115140903906121"	""	"0.0003839"	"0.001906"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDIK"	"[R].iMQWQDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"507.29498"	"1519.87040"	"1519.87069"	"-0.19"	"-0.00010"	"8/66"	"8"	"66"	"4600819.25634766"	"HCD"	"MS2"	"42.05021"	"150.6"	"100.000"	"55.6898"	"17197"	"17197"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.9"	""	"238.0"	""	"212.0"	""	"225.1"	"3.8"	"247.2"	"248.7"	""	"919"	"16"	"36.000"	"29.000"	"1.20305509227662"	"23"	"0.0008453"	"0.008016"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDIK"	"[R].iMQWQDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"760.43909"	"1519.87090"	"1519.87069"	"0.14"	"0.00010"	"7/66"	"7"	"66"	"11563359.1748047"	"HCD"	"MS2"	"7.754536"	"537.2"	"61.702"	"55.4334"	"17038"	"17038"	"17019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1106.1"	""	"949.9"	""	"793.5"	""	"623.7"	"1.1"	"779.3"	"814.7"	""	"916"	"37"	"36.000"	"29.000"	"0.00816329475491225"	"29"	"0.0001889"	"0.0009754"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDIK"	"[R].iMQWQDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.4074"	"0.0000"	"1"	"1"	"1"	"507.29520"	"1519.87104"	"1519.87069"	"0.23"	"0.00011"	"10/66"	"10"	"66"	"12487589.0342407"	"HCD"	"MS2"	"19.50227"	"337.4"	"100.000"	"55.3887"	"17074"	"17074"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"680.4"	""	"649.6"	""	"481.9"	""	"419.8"	""	"468.8"	"481.6"	""	"921"	"27"	"36.000"	"29.000"	"0.0887625222524426"	""	"0.0003839"	"0.001754"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQLYPSNK"	"[K].vLQLYPSNk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"507.31281"	"1519.92386"	"1519.92484"	"-0.64"	"-0.00032"	"9/76"	"9"	"76"	"6062875.25567627"	"HCD"	"MS2"	"19.74202"	"176.9"	"100.000"	"47.0206"	"13628"	"13628"	"13608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.7"	""	"241.6"	""	"260.5"	""	"292.1"	""	"301.8"	"307.8"	""	"562"	"27"	"34.000"	"27.000"	"0.0555528468871432"	"16"	"0.0001889"	"0.0007299"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPGTYIGVK"	"[K].nLPGTYIGVk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H70"	"Interleukin-33 OS=Rattus norvegicus OX=10116 GN=Il33 PE=2 SV=1"	"Q66H70"	"Interleukin-33 OS=Rattus norvegicus OX=10116 GN=Il33 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"760.46600"	"1519.92473"	"1519.92484"	"-0.07"	"-0.00005"	"12/90"	"12"	"90"	"1121589.73937988"	"HCD"	"MS2"	"0"	"119.3"	"100.000"	"45.4089"	"12973"	"12973"	"12955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.5"	""	"184.0"	""	"158.9"	""	"202.4"	"0.4"	"199.2"	"196.1"	""	"560"	"40"	"34.000"	"27.000"	"0.00303499535925937"	""	"0"	"3.94E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQLYPSNK"	"[K].vLQLYPSNk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"760.46600"	"1519.92473"	"1519.92484"	"-0.07"	"-0.00005"	"7/76"	"7"	"76"	"3660412.85491943"	"HCD"	"MS2"	"0"	"246.9"	"100.000"	"47.2472"	"13769"	"13769"	"13746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"367.1"	""	"359.3"	""	"370.3"	""	"390.2"	"0.3"	"414.5"	"434.3"	""	"560"	"38"	"34.000"	"27.000"	"0.00465755542103647"	"24"	"0.0001308"	"0.0002163"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQLYPSNK"	"[K].vLQLYPSNk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"760.46613"	"1519.92497"	"1519.92484"	"0.09"	"0.00007"	"8/76"	"8"	"76"	"3734504.71136475"	"HCD"	"MS2"	"6.298141"	"241.9"	"100.000"	"46.9881"	"13615"	"13615"	"13592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"359.1"	""	"337.0"	""	"347.6"	""	"395.5"	"3.7"	"421.4"	"425.4"	""	"560"	"40"	"34.000"	"27.000"	"0.00287844563475412"	"27"	"7.476E-05"	"0.0001899"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"KPTTEEK"	"[K].kPTTEEk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"507.31454"	"1519.92908"	"1519.92987"	"-0.52"	"-0.00026"	"5/66"	"5"	"66"	"7104191.8807373"	"HCD"	"MS2"	"50.22169"	"478.4"	"100.000"	"25.1227"	"4784"	"4784"	"4763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"734.9"	""	"607.6"	""	"756.4"	""	"759.0"	""	"921.1"	"751.9"	""	"533"	"3"	"34.000"	"27.000"	"13.1733798081992"	"13"	"0.0001889"	"0.000991"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMELFPANK"	"[R].lMELFPANk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"760.94647"	"1520.88567"	"1520.89109"	"-3.57"	"-0.00271"	"7/66"	"7"	"66"	"1427474.98345947"	"HCD"	"MS2"	"0"	"113.7"	"100.000"	"63.3029"	"20302"	"20302"	"20275"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.9"	""	"148.7"	"2.7"	"145.1"	""	"165.6"	"0.5"	"242.9"	"230.4"	""	"872"	"17"	"36.000"	"29.000"	"0.910933113052361"	"22"	"0.0006037"	"0.004841"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMELFPANK"	"[R].lMELFPANk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"507.63474"	"1520.88965"	"1520.89109"	"-0.95"	"-0.00048"	"9/66"	"9"	"66"	"3520204.70214844"	"HCD"	"MS2"	"24.24497"	"90.6"	"100.000"	"63.4106"	"20293"	"20293"	"20265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.6"	""	"130.6"	""	"153.7"	""	"105.2"	""	"165.7"	"180.8"	""	"805"	"33"	"36.000"	"29.000"	"0.0181036391594549"	"22"	"0.0004166"	"0.002168"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMELFPANK"	"[R].lMELFPANk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"760.94855"	"1520.88982"	"1520.89109"	"-0.84"	"-0.00064"	"5/66"	"5"	"66"	"2112184.27416992"	"HCD"	"MS2"	"16.0205"	"148.4"	"100.000"	"63.3599"	"20272"	"20272"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"213.2"	""	"221.7"	""	"240.8"	""	"174.9"	""	"259.0"	"298.6"	""	"808"	"29"	"36.000"	"29.000"	"0.0470306915881839"	""	"0"	"0.0001289"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMELFPANK"	"[R].lMELFPANk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"507.63486"	"1520.89002"	"1520.89109"	"-0.71"	"-0.00036"	"9/66"	"9"	"66"	"4059412.42443848"	"HCD"	"MS2"	"39.39137"	"105.4"	"100.000"	"63.4967"	"20381"	"20381"	"20355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.9"	""	"161.3"	""	"177.2"	""	"114.8"	"0.0"	"196.2"	"186.4"	""	"807"	"30"	"36.000"	"29.000"	"0.0379178355812832"	"22"	"0.0004166"	"0.002196"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPDLYNK"	"[K].vLTPDLYNk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"507.64081"	"1520.90787"	"1520.90885"	"-0.64"	"-0.00033"	"8/70"	"8"	"70"	"6184195.16955566"	"HCD"	"MS2"	"18.52036"	"200.1"	"100.000"	"48.2591"	"14135"	"14135"	"14112"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.2"	""	"194.3"	""	"179.1"	""	"134.4"	""	"151.3"	"943.3"	""	"701"	"16"	"35.000"	"28.000"	"0.967582538605231"	"15"	"0.003507"	"0.08132"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPDLYNK"	"[K].vLTPDLYNk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.64096"	"1520.90833"	"1520.90885"	"-0.34"	"-0.00017"	"6/70"	"6"	"70"	"7842322.8916626"	"HCD"	"MS2"	"14.86352"	"230.4"	"100.000"	"48.5339"	"14295"	"14295"	"14271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"411.2"	""	"191.3"	""	"177.6"	""	"128.3"	""	"141.1"	"1140.7"	""	"701"	"27"	"35.000"	"28.000"	"0.07424855779046"	"14"	"0.002925"	"0.0505"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPDLYNK"	"[K].vLTPDLYNk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"760.95782"	"1520.90837"	"1520.90885"	"-0.31"	"-0.00024"	"8/70"	"8"	"70"	"4048877.70471191"	"HCD"	"MS2"	"0"	"282.1"	"100.000"	"48.1534"	"14092"	"14092"	"14064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"535.8"	""	"199.9"	""	"186.1"	""	"131.6"	""	"115.9"	"1511.9"	""	"701"	"39"	"35.000"	"28.000"	"0.00438215790091311"	"21"	"0.0003839"	"0.002011"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPDLYNK"	"[K].vLTPDLYNk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"760.95862"	"1520.90996"	"1520.90885"	"0.73"	"0.00055"	"8/70"	"8"	"70"	"4313467.72418213"	"HCD"	"MS2"	"11.67829"	"299.4"	"100.000"	"48.4581"	"14264"	"14264"	"14239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"549.3"	""	"197.1"	""	"194.2"	""	"126.5"	""	"113.8"	"1669.0"	""	"685"	"41"	"35.000"	"28.000"	"0.00303850934123001"	"22"	"0.000494"	"0.00275"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPTTGMTITK"	"[K].lPTTGMTITk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.95966"	"1520.91203"	"1520.91222"	"-0.12"	"-0.00009"	"9/84"	"9"	"84"	"2387824.31237793"	"HCD"	"MS2"	"0"	"165.8"	"100.000"	"46.6633"	"13530"	"13530"	"13506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.1"	""	"248.4"	""	"246.4"	""	"229.7"	""	"287.5"	"310.0"	""	"675"	"40"	"35.000"	"28.000"	"0.00307095729513385"	"15"	"0"	"0.0001131"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPTTGMTITK"	"[K].lPTTGMTITk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.95978"	"1520.91228"	"1520.91222"	"0.04"	"0.00003"	"9/84"	"9"	"84"	"2461109.38708496"	"HCD"	"MS2"	"19.9925"	"172.7"	"100.000"	"46.4035"	"13376"	"13376"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"253.4"	""	"264.6"	""	"254.7"	""	"240.6"	""	"307.8"	"316.1"	""	"679"	"30"	"35.000"	"28.000"	"0.0320508667499071"	"14"	"0"	"9.275E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLLENSVLK"	"[K].fLLENSVLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"760.97455"	"1520.94182"	"1520.94524"	"-2.25"	"-0.00171"	"14/76"	"14"	"76"	"2319742.10040283"	"HCD"	"MS2"	"54.79116"	"173.8"	"100.000"	"62.8773"	"20128"	"20128"	"20099"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"239.8"	""	"236.0"	""	"245.2"	""	"286.3"	""	"314.4"	"325.3"	""	"445"	"44"	"33.000"	"26.000"	"0.000794932064888042"	""	"0"	"0.0001446"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLLENSVLK"	"[K].fLLENSVLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"760.97589"	"1520.94451"	"1520.94524"	"-0.48"	"-0.00037"	"8/76"	"8"	"76"	"1761690.26617432"	"HCD"	"MS2"	"39.50842"	"123.8"	"100.000"	"62.8512"	"20064"	"20064"	"20041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.2"	""	"173.3"	""	"181.2"	""	"212.7"	"3.1"	"221.1"	"216.5"	""	"429"	"45"	"33.000"	"26.000"	"0.000707012832620647"	""	"0"	"9.288E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPMQVWFLSR"	"[K].ePMQVWFLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"761.40771"	"1521.80815"	"1521.80854"	"-0.25"	"-0.00019"	"6/100"	"6"	"100"	"2273910.66394043"	"HCD"	"MS2"	"11.79589"	"112.8"	"100.000"	"65.8775"	"21353"	"21353"	"21331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.5"	""	"175.7"	""	"167.6"	""	"147.0"	"1.3"	"185.6"	"206.2"	""	"1020"	"40"	"37.000"	"30.000"	"0.00488168976360371"	"25"	"0"	"0.0001419"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPMQVWFLSR"	"[K].ePMQVWFLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"761.40790"	"1521.80852"	"1521.80854"	"-0.01"	"-0.00001"	"6/100"	"6"	"100"	"2211744.49597168"	"HCD"	"MS2"	"0"	"108.8"	"100.000"	"65.9362"	"21324"	"21324"	"21305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.4"	""	"162.6"	""	"162.9"	""	"138.1"	"0.3"	"187.9"	"203.9"	""	"973"	"43"	"36.000"	"29.000"	"0.00253561226952622"	"27"	"0"	"7.943E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPFGNTFLNR"	"[K].lNPFGNTFLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"507.94986"	"1521.83503"	"1521.83753"	"-1.64"	"-0.00083"	"13/98"	"13"	"98"	"7008972.04077148"	"HCD"	"MS2"	"10.07605"	"102.2"	"100.000"	"60.1885"	"19030"	"19030"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.4"	""	"144.2"	""	"149.7"	""	"145.4"	"8.5"	"179.7"	"172.9"	""	"1000"	"34"	"36.000"	"30.000"	"0.0182797395806563"	"19"	"0.0001889"	"0.0004265"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPFGNTFLNR"	"[K].lNPFGNTFLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"761.42206"	"1521.83684"	"1521.83753"	"-0.45"	"-0.00034"	"9/98"	"9"	"98"	"15001594.9494629"	"HCD"	"MS2"	"5.506323"	"210.9"	"27.956"	"60.1426"	"19012"	"19012"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"326.4"	""	"300.8"	""	"303.3"	""	"312.2"	"20.3"	"367.8"	"365.2"	""	"995"	"49"	"36.000"	"29.000"	"0.000678880110452991"	"25"	"0"	"6.901E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPFGNTFLNR"	"[K].lNPFGNTFLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"761.42230"	"1521.83733"	"1521.83753"	"-0.13"	"-0.00010"	"9/98"	"9"	"98"	"7168244.48217773"	"HCD"	"MS2"	"21.91727"	"330.7"	"100.000"	"59.6665"	"18763"	"18763"	"18745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"454.9"	""	"460.4"	""	"473.6"	""	"551.8"	"3.2"	"580.9"	"606.6"	""	"1009"	"46"	"37.000"	"30.000"	"0.0011320384305484"	"26"	"0"	"3.016E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPFGNTFLNR"	"[K].lNPFGNTFLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"761.42230"	"1521.83733"	"1521.83753"	"-0.13"	"-0.00010"	"9/98"	"9"	"98"	"8974183.55389404"	"HCD"	"MS2"	"7.140769"	"388.1"	"100.000"	"59.8365"	"18886"	"18886"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"554.0"	""	"560.1"	""	"527.4"	""	"653.1"	"2.7"	"661.4"	"716.4"	""	"1009"	"53"	"37.000"	"30.000"	"0.000243703165629065"	"25"	"0"	"5.47E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPFGNTFLNR"	"[K].lNPFGNTFLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"507.95065"	"1521.83741"	"1521.83753"	"-0.08"	"-0.00004"	"13/98"	"13"	"98"	"8894672.14648438"	"HCD"	"MS2"	"11.85341"	"85.2"	"100.000"	"59.8806"	"18904"	"18904"	"18884"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.5"	""	"123.3"	""	"131.8"	""	"145.5"	"3.6"	"151.0"	"142.5"	""	"1007"	"39"	"37.000"	"30.000"	"0.00568852243037754"	"20"	"0"	"0.0001231"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPFGNTFLNR"	"[K].lNPFGNTFLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"507.95093"	"1521.83823"	"1521.83753"	"0.46"	"0.00023"	"13/98"	"13"	"98"	"10946445.7744141"	"HCD"	"MS2"	"13.22034"	"75.7"	"100.000"	"59.7540"	"18799"	"18799"	"18777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.4"	""	"104.7"	""	"111.1"	""	"126.1"	""	"127.0"	"143.2"	""	"1007"	"54"	"37.000"	"30.000"	"0.000207491100865506"	"22"	"0"	"8.117E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPFGNTFLNR"	"[K].lNPFGNTFLNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"761.42322"	"1521.83916"	"1521.83753"	"1.07"	"0.00082"	"9/98"	"9"	"98"	"16570422.4163818"	"HCD"	"MS2"	"0.262658"	"261.9"	"32.942"	"59.9747"	"18890"	"18890"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.0"	""	"387.2"	""	"388.2"	""	"398.5"	"11.4"	"443.5"	"473.3"	""	"992"	"52"	"36.000"	"29.000"	"0.000297496373822733"	"26"	"0"	"5.842E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPFSFEHIR"	"[K].fLPFSFEHIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"507.95184"	"1521.84098"	"1521.84155"	"-0.38"	"-0.00019"	"8/76"	"8"	"76"	"3461188.17919922"	"HCD"	"MS2"	"25.69158"	"44.5"	"100.000"	"60.6478"	"19164"	"19164"	"19145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.1"	""	"60.5"	""	"65.1"	""	"73.4"	"1.8"	"91.1"	"77.3"	""	"1034"	"54"	"37.000"	"30.000"	"0.000214037831881801"	"22"	"0"	"1.831E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLPFSFEHIR"	"[K].fLPFSFEHIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"507.95197"	"1521.84134"	"1521.84155"	"-0.14"	"-0.00007"	"8/76"	"8"	"76"	"3608716.42694092"	"HCD"	"MS2"	"25.5181"	"48.5"	"100.000"	"60.7862"	"19274"	"19274"	"19251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.0"	""	"73.3"	""	"74.6"	""	"71.3"	"0.1"	"84.0"	"90.9"	""	"1033"	"47"	"37.000"	"30.000"	"0.00106431535020396"	"17"	"0"	"7.904E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].imQWQDVk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"761.42670"	"1521.84612"	"1521.84996"	"-2.52"	"-0.00192"	"10/66"	"10"	"66"	"622931.281921387"	"HCD"	"MS2"	"0"	"58.6"	"100.000"	"44.0246"	"12458"	"12458"	"12431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.1"	""	"94.1"	""	"88.1"	""	"92.1"	""	"76.2"	"93.2"	""	"962"	"21"	"36.000"	"29.000"	"0.34130690639039"	"17"	"0.006346"	"0.2276"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].imQWQDVk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"761.42743"	"1521.84758"	"1521.84996"	"-1.56"	"-0.00119"	"12/66"	"12"	"66"	"556296.723693848"	"HCD"	"MS2"	"0"	"56.5"	"100.000"	"43.6670"	"12263"	"12263"	"12237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.6"	""	"92.0"	""	"86.5"	""	"87.2"	""	"75.5"	"84.1"	""	"933"	"24"	"36.000"	"29.000"	"0.208377895738424"	"19"	"0.002651"	"0.03914"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].imQWQDVk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"761.42767"	"1521.84807"	"1521.84996"	"-1.24"	"-0.00094"	"11/66"	"11"	"66"	"6003620.96759033"	"HCD"	"MS2"	"0"	"409.0"	"100.000"	"41.4396"	"11408"	"11408"	"11389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"673.7"	""	"566.2"	""	"472.2"	""	"1148.2"	"1.2"	"480.5"	"514.4"	""	"930"	"28"	"36.000"	"29.000"	"0.0809940196127101"	"18"	"0.0001889"	"0.001097"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].imQWQDVk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"761.42798"	"1521.84868"	"1521.84996"	"-0.84"	"-0.00064"	"9/66"	"9"	"66"	"1703661.94769287"	"HCD"	"MS2"	"0"	"133.5"	"100.000"	"41.5611"	"11414"	"11414"	"11387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.4"	""	"207.5"	""	"190.2"	""	"230.2"	""	"190.5"	"201.3"	""	"957"	"15"	"36.000"	"29.000"	"1.52363851414595"	"14"	"0.001058"	"0.01373"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].imQWQDVk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"761.42798"	"1521.84868"	"1521.84996"	"-0.84"	"-0.00064"	"11/66"	"11"	"66"	"6107192.07818604"	"HCD"	"MS2"	"13.78073"	"437.2"	"100.000"	"41.2379"	"11282"	"11282"	"11253"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"711.9"	""	"592.6"	""	"541.3"	""	"1194.8"	"1.0"	"523.9"	"557.2"	""	"957"	"26"	"36.000"	"29.000"	"0.110887334000992"	"17"	"0.0003839"	"0.001696"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].imQWQDVk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"761.42804"	"1521.84880"	"1521.84996"	"-0.76"	"-0.00058"	"6/66"	"6"	"66"	"1019323.62817383"	"HCD"	"MS2"	"28.73514"	"104.4"	"100.000"	"50.8052"	"15217"	"15217"	"15190"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.1"	""	"170.3"	""	"153.0"	""	"134.4"	""	"151.3"	"161.8"	""	"957"	"37"	"36.000"	"29.000"	"0.00965788305021627"	"21"	"0.0009404"	"0.01003"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].imQWQDVk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"761.42871"	"1521.85015"	"1521.84996"	"0.12"	"0.00009"	"7/66"	"7"	"66"	"1003373.597229"	"HCD"	"MS2"	"0"	"96.5"	"100.000"	"46.7716"	"13527"	"13527"	"13496"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.3"	""	"136.4"	""	"133.1"	""	"141.5"	"0.3"	"168.2"	"176.9"	""	"942"	"26"	"36.000"	"29.000"	"0.112725172126694"	""	"0.0008731"	"0.00883"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].imQWQDVk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"761.42871"	"1521.85015"	"1521.84996"	"0.12"	"0.00009"	"11/66"	"11"	"66"	"1427498.16925049"	"HCD"	"MS2"	"0"	"115.5"	"100.000"	"41.7445"	"11533"	"11533"	"11506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.5"	""	"188.4"	""	"156.1"	""	"219.8"	"1.3"	"149.7"	"165.2"	""	"942"	"26"	"36.000"	"29.000"	"0.131528814922279"	"17"	"0.001846"	"0.02643"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDVK"	"[R].imQWQDVk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"761.43018"	"1521.85307"	"1521.84996"	"2.05"	"0.00156"	"5/66"	"5"	"66"	"1086207.31994629"	"HCD"	"MS2"	"0"	"119.8"	"100.000"	"50.6416"	"15100"	"15100"	"15074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.5"	""	"192.4"	""	"156.9"	""	"170.8"	"1.9"	"178.5"	"170.5"	""	"922"	"9"	"36.000"	"29.000"	"5.84387510160467"	"14"	"0.007034"	"0.2635"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQYLNEIK"	"[K].gVQYLNEIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"507.97232"	"1521.90241"	"1521.90410"	"-1.11"	"-0.00056"	"6/76"	"6"	"76"	"7813951.85760498"	"HCD"	"MS2"	"25.55258"	"260.9"	"100.000"	"45.0620"	"12880"	"12880"	"12859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"359.6"	""	"364.4"	""	"392.5"	""	"392.5"	""	"473.7"	"493.2"	""	"712"	"28"	"35.000"	"28.000"	"0.0594908258694612"	""	"0.0001889"	"0.0006541"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQYLNEIK"	"[K].gVQYLNEIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"761.45490"	"1521.90251"	"1521.90410"	"-1.04"	"-0.00079"	"6/76"	"6"	"76"	"1324920.53045654"	"HCD"	"MS2"	"36.98304"	"126.3"	"100.000"	"45.8074"	"13132"	"13132"	"13103"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.1"	""	"166.5"	""	"191.9"	""	"187.6"	"0.1"	"211.5"	"210.5"	""	"711"	"11"	"35.000"	"28.000"	"2.63535790782476"	"18"	"0.009642"	"0.4364"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQYLNEIK"	"[K].gVQYLNEIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.5745"	"0.0000"	"1"	"1"	"1"	"761.45496"	"1521.90264"	"1521.90410"	"-0.96"	"-0.00073"	"8/76"	"8"	"76"	"4818138.26904297"	"HCD"	"MS2"	"11.10913"	"392.5"	"100.000"	"44.9538"	"12836"	"12836"	"12811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"584.9"	""	"492.1"	""	"605.0"	""	"603.3"	""	"716.4"	"716.4"	""	"711"	"47"	"35.000"	"28.000"	"0.000767078137453773"	""	"0"	"0.0001622"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQYLNEIK"	"[K].gVQYLNEIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"761.45502"	"1521.90276"	"1521.90410"	"-0.88"	"-0.00067"	"8/76"	"8"	"76"	"6071849.28198242"	"HCD"	"MS2"	"14.19724"	"466.0"	"100.000"	"44.9906"	"12851"	"12851"	"12827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"666.7"	""	"620.8"	""	"702.7"	""	"699.4"	""	"853.1"	"872.1"	""	"711"	"51"	"35.000"	"28.000"	"0.000300496629454483"	""	"0"	"0.0001769"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQYLNEIK"	"[K].gVQYLNEIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"761.45508"	"1521.90288"	"1521.90410"	"-0.80"	"-0.00061"	"8/76"	"8"	"76"	"5413247.23132324"	"HCD"	"MS2"	"7.928904"	"444.4"	"100.000"	"44.8003"	"12724"	"12724"	"12704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"624.5"	""	"607.9"	""	"669.4"	""	"677.4"	""	"802.7"	"828.7"	""	"709"	"49"	"35.000"	"28.000"	"0.000489346221801722"	""	"0.0001308"	"0.0002232"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLALGDSGVGK"	"[K].fLALGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P23640"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1"	"P23640"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"507.97250"	"1521.90296"	"1521.90410"	"-0.75"	"-0.00038"	"8/82"	"8"	"82"	"2774662.1373291"	"HCD"	"MS2"	"31.15997"	"96.3"	"100.000"	"54.7462"	"16757"	"16757"	"16736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.5"	""	"133.9"	""	"130.5"	""	"157.4"	"4.8"	"179.4"	"182.4"	""	"709"	"56"	"35.000"	"28.000"	"9.96818844376424E-05"	"20"	"0"	"3.814E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLALGDSGVGK"	"[K].fLALGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P23640"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1"	"P23640"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"761.45538"	"1521.90349"	"1521.90410"	"-0.40"	"-0.00030"	"10/82"	"10"	"82"	"2772200.19842529"	"HCD"	"MS2"	"0"	"208.2"	"100.000"	"54.6269"	"16708"	"16708"	"16688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"263.2"	""	"289.5"	""	"301.6"	""	"360.6"	""	"377.3"	"381.4"	""	"687"	"66"	"35.000"	"28.000"	"7.92367659325343E-06"	"27"	"0"	"6.443E-06"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLALGDSGVGK"	"[K].fLALGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P23640"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1"	"P23640"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1"	"0"	"3"	"3"	"0.9273"	"0.0000"	"1"	"1"	"1"	"507.97272"	"1521.90360"	"1521.90410"	"-0.33"	"-0.00017"	"8/82"	"8"	"82"	"2737788.31390381"	"HCD"	"MS2"	"9.874186"	"102.2"	"100.000"	"54.9475"	"16893"	"16893"	"16869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.1"	""	"138.9"	""	"132.5"	""	"170.8"	"1.6"	"194.2"	"200.4"	""	"690"	"55"	"35.000"	"28.000"	"0.000100883257035595"	"20"	"0"	"6.424E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQYLNEIK"	"[K].gVQYLNEIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"507.97296"	"1521.90433"	"1521.90410"	"0.15"	"0.00008"	"6/76"	"6"	"76"	"7303517.47979736"	"HCD"	"MS2"	"44.18013"	"233.9"	"100.000"	"44.7839"	"12718"	"12718"	"12688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"307.8"	""	"305.0"	""	"343.7"	""	"371.7"	""	"427.1"	"462.7"	""	"681"	"26"	"35.000"	"28.000"	"0.0851367595657635"	"28"	"0.0001889"	"0.0004873"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLALGDSGVGK"	"[K].fLALGDSGVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P23640"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1"	"P23640"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1"	"0"	"2"	"2"	"0.8413"	"0.0000"	"1"	"1"	"1"	"761.45593"	"1521.90459"	"1521.90410"	"0.32"	"0.00024"	"10/82"	"10"	"82"	"2953714.62640381"	"HCD"	"MS2"	"0"	"215.6"	"100.000"	"54.8261"	"16843"	"16843"	"16821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.7"	""	"308.9"	""	"305.9"	""	"365.2"	""	"377.4"	"409.2"	""	"680"	"63"	"35.000"	"28.000"	"1.79671385603561E-05"	"26"	"0"	"8.494E-06"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NECFLQHK"	"[R].nEcFLQHk.[D]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"508.26785"	"1522.78901"	"1522.79106"	"-1.35"	"-0.00069"	"5/70"	"5"	"70"	"29983642.184082"	"HCD"	"MS2"	"10.36827"	"295.1"	"18.226"	"36.3426"	"9276"	"9276"	"9258"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.8"	""	"371.8"	""	"365.3"	""	"489.1"	"5.3"	"656.1"	"567.4"	""	"930"	"27"	"36.000"	"29.000"	"0.0894237653943224"	"20"	"0.000523"	"0.003162"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NECFLQHK"	"[R].nEcFLQHk.[D]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"761.89886"	"1522.79045"	"1522.79106"	"-0.40"	"-0.00030"	"6/70"	"6"	"70"	"534765.576416016"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"36.3816"	"9336"	"9336"	"9305"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.1"	""	"64.4"	""	"75.2"	""	"86.2"	"1.5"	"121.1"	"126.6"	""	"921"	"37"	"36.000"	"29.000"	"0.01021479451318"	"25"	"0.0001308"	"0.0002439"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPFGNTFLNR"	"[K].lNPFGnTFLNR.[F]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"761.91272"	"1522.81816"	"1522.82154"	"-2.22"	"-0.00169"	"9/98"	"9"	"98"	"1551859.35626221"	"HCD"	"MS2"	"0"	"109.4"	"100.000"	"64.0376"	"20549"	"20549"	"20521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.5"	""	"152.1"	""	"169.2"	""	"161.5"	"2.6"	"182.2"	"194.9"	""	"1033"	"18"	"37.000"	"30.000"	"0.803656248724021"	"18"	"0"	"6.819E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPFGNTFLNR"	"[K].lNPFGnTFLNR.[F]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"761.91321"	"1522.81914"	"1522.82154"	"-1.58"	"-0.00120"	"10/98"	"10"	"98"	"1796417.59460449"	"HCD"	"MS2"	"0"	"112.3"	"100.000"	"64.0890"	"20623"	"20623"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.5"	""	"143.1"	""	"172.2"	""	"176.9"	"2.6"	"188.8"	"196.9"	""	"1033"	"22"	"37.000"	"30.000"	"0.295168715841019"	"19"	"0"	"7.117E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDELYHLK"	"[K].fDELYHLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97839"	"Disks large-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Dlgap4 PE=1 SV=1"	"P97839"	"Disks large-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Dlgap4 PE=1 SV=1"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"508.29367"	"1522.86646"	"1522.86699"	"-0.35"	"-0.00018"	"6/58"	"6"	"58"	"5312320.90960693"	"HCD"	"MS2"	"15.33455"	"192.7"	"100.000"	"50.9127"	"15211"	"15211"	"15186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.0"	""	"251.8"	""	"283.4"	""	"303.1"	""	"345.5"	"367.1"	""	"946"	"16"	"36.000"	"29.000"	"1.09360664575306"	"22"	"0.0001889"	"0.0007214"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDELYHLK"	"[K].fDELYHLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97839"	"Disks large-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Dlgap4 PE=1 SV=1"	"P97839"	"Disks large-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Dlgap4 PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"508.29367"	"1522.86646"	"1522.86699"	"-0.35"	"-0.00018"	"6/58"	"6"	"58"	"5270841.83618164"	"HCD"	"MS2"	"14.83064"	"188.7"	"100.000"	"51.0763"	"15328"	"15328"	"15302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.8"	""	"248.4"	""	"272.6"	""	"314.8"	""	"351.0"	"358.9"	""	"946"	"23"	"36.000"	"29.000"	"0.255188524449655"	"19"	"0.0006037"	"0.003682"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEMMASLLK"	"[R].aAEMMASLLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"508.29523"	"1522.87113"	"1522.87373"	"-1.71"	"-0.00087"	"7/80"	"7"	"80"	"2861405.42816162"	"HCD"	"MS2"	"7.485525"	"85.7"	"100.000"	"66.3969"	"21565"	"21565"	"21539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.9"	""	"139.9"	""	"144.9"	""	"93.7"	""	"154.8"	"159.6"	""	"939"	"44"	"36.000"	"29.000"	"0.0017007308775664"	"25"	"0"	"0.0001585"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEMMASLLK"	"[R].aAEMMASLLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"761.93945"	"1522.87163"	"1522.87373"	"-1.38"	"-0.00105"	"9/80"	"9"	"80"	"2865430.40771484"	"HCD"	"MS2"	"14.24304"	"215.9"	"100.000"	"66.4199"	"21574"	"21574"	"21555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"337.8"	""	"342.0"	""	"334.4"	""	"221.4"	"0.3"	"392.4"	"415.9"	""	"919"	"68"	"36.000"	"29.000"	"7.52117191596078E-06"	"27"	"0"	"2.194E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEMMASLLK"	"[R].aAEMMASLLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"508.29544"	"1522.87177"	"1522.87373"	"-1.29"	"-0.00065"	"11/80"	"11"	"80"	"2710705.06329346"	"HCD"	"MS2"	"8.298039"	"85.0"	"100.000"	"66.4601"	"21538"	"21538"	"21513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.7"	""	"125.4"	""	"142.2"	""	"93.8"	""	"162.0"	"157.8"	""	"917"	"45"	"36.000"	"29.000"	"0.00134072386524117"	"24"	"0"	"0.0001128"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEMMASLLK"	"[R].aAEMMASLLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"761.93970"	"1522.87212"	"1522.87373"	"-1.06"	"-0.00080"	"15/80"	"15"	"80"	"2648539.34844971"	"HCD"	"MS2"	"3.633729"	"216.7"	"100.000"	"66.4901"	"21550"	"21550"	"21529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"329.5"	""	"336.9"	""	"369.2"	""	"222.0"	""	"386.8"	"407.9"	""	"917"	"56"	"36.000"	"29.000"	"0.000105036281879403"	"26"	"0"	"2.983E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HWGGNVLGPK"	"[R].hWGGNVLGPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"508.30124"	"1522.88916"	"1522.88945"	"-0.19"	"-0.00010"	"8/84"	"8"	"84"	"51805752.2668457"	"HCD"	"MS2"	"33.28093"	"1038.3"	"63.911"	"35.5886"	"9010"	"9010"	"8986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1420.8"	""	"1363.6"	""	"1359.5"	""	"1883.4"	"32.7"	"1959.2"	"1820.0"	""	"774"	"30"	"35.000"	"28.000"	"0.0396927295459295"	"21"	"0"	"0.0001135"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HWGGNVLGPK"	"[R].hWGGNVLGPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"508.30139"	"1522.88962"	"1522.88945"	"0.11"	"0.00006"	"8/84"	"8"	"84"	"64724315.4541016"	"HCD"	"MS2"	"23.44906"	"996.5"	"48.501"	"35.5448"	"8949"	"8949"	"8923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1353.3"	""	"1288.0"	""	"1330.8"	""	"1782.2"	"38.8"	"1898.6"	"1753.1"	""	"762"	"32"	"35.000"	"28.000"	"0.0248270418137181"	"21"	"0"	"9.579E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HWGGNVLGPK"	"[R].hWGGNVLGPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.94849"	"1522.88970"	"1522.88945"	"0.16"	"0.00012"	"11/84"	"11"	"84"	"474428.553649902"	"HCD"	"MS2"	"0"	"45.3"	"100.000"	"35.6802"	"9048"	"9048"	"9017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.2"	""	"58.1"	""	"58.2"	""	"87.1"	"1.5"	"83.0"	"77.2"	""	"760"	"24"	"35.000"	"28.000"	"0.139246278366177"	"14"	"0.0001889"	"0.0005024"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HWGGNVLGPK"	"[R].hWGGNVLGPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"761.95319"	"1522.89910"	"1522.88945"	"6.33"	"0.00482"	"16/84"	"16"	"84"	"546357.212158203"	"HCD"	"MS2"	"0"	"48.2"	"100.000"	"35.5104"	"8935"	"8935"	"8907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.2"	""	"82.7"	""	"72.1"	""	"65.3"	""	"84.8"	"84.8"	""	"694"	"46"	"35.000"	"28.000"	"0.000855715650020316"	""	"0.0001308"	"0.0002763"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWPLYLSTK"	"[K].gWPLYLSTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"761.95465"	"1522.90203"	"1522.90337"	"-0.88"	"-0.00067"	"6/66"	"6"	"66"	"12538149.8494873"	"HCD"	"MS2"	"48.86992"	"362.8"	"47.270"	"60.2277"	"19046"	"19046"	"19027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"583.0"	""	"521.9"	""	"585.2"	""	"485.5"	""	"617.9"	"641.3"	""	"675"	"33"	"35.000"	"28.000"	"0.0153912459133562"	"20"	"0.0001889"	"0.00046"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWPLYLSTK"	"[K].gWPLYLSTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"761.95502"	"1522.90276"	"1522.90337"	"-0.40"	"-0.00031"	"7/66"	"7"	"66"	"17369336.5776367"	"HCD"	"MS2"	"53.9475"	"332.9"	"28.234"	"60.0531"	"18922"	"18922"	"18905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"556.5"	""	"471.5"	""	"521.7"	""	"462.4"	"3.7"	"562.8"	"569.7"	""	"673"	"35"	"35.000"	"28.000"	"0.0101855636855609"	"21"	"0.0001889"	"0.0006002"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGHPFVIQLGR"	"[K].aVGHPFVIQLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"508.30594"	"1522.90326"	"1522.90555"	"-1.50"	"-0.00076"	"10/96"	"10"	"96"	"11862602.828186"	"HCD"	"MS2"	"25.83469"	"368.6"	"87.056"	"41.3365"	"11366"	"11366"	"11341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"485.3"	""	"451.3"	""	"502.2"	""	"690.9"	"4.8"	"688.3"	"670.7"	""	"661"	"27"	"35.000"	"28.000"	"0.069210416665872"	"19"	"0"	"0.0001384"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALASLGYEK"	"[K].lALASLGYEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"508.31216"	"1522.92194"	"1522.92450"	"-1.68"	"-0.00085"	"10/80"	"10"	"80"	"5290363.918396"	"HCD"	"MS2"	"18.75488"	"144.0"	"100.000"	"55.8165"	"17249"	"17249"	"17221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.7"	""	"200.4"	""	"221.8"	""	"219.5"	""	"264.2"	"273.9"	""	"506"	"35"	"34.000"	"27.000"	"0.00822470862385148"	"25"	"0.0001889"	"0.0004453"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALASLGYEK"	"[K].lALASLGYEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"508.31250"	"1522.92295"	"1522.92450"	"-1.02"	"-0.00052"	"10/80"	"10"	"80"	"5013317.74047852"	"HCD"	"MS2"	"17.52526"	"148.2"	"100.000"	"55.6450"	"17125"	"17125"	"17099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"208.0"	""	"191.2"	""	"233.6"	""	"243.1"	""	"265.3"	"263.5"	""	"501"	"38"	"33.000"	"26.000"	"0.00401612970367856"	"25"	"0.0001889"	"0.0008985"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALASLGYEK"	"[K].lALASLGYEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.6197"	"0.0000"	"1"	"1"	"1"	"761.96576"	"1522.92424"	"1522.92450"	"-0.17"	"-0.00013"	"9/80"	"9"	"80"	"4061988.44995117"	"HCD"	"MS2"	"17.10035"	"307.6"	"100.000"	"55.8073"	"17245"	"17245"	"17221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"482.5"	""	"460.7"	""	"464.2"	""	"456.4"	"2.4"	"531.1"	"512.4"	""	"501"	"71"	"33.000"	"26.000"	"1.9178195003127E-06"	""	"0"	"4.623E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALASLGYEK"	"[K].lALASLGYEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.5972"	"0.0000"	"1"	"1"	"1"	"761.96594"	"1522.92461"	"1522.92450"	"0.07"	"0.00005"	"18/80"	"18"	"80"	"3862909.8659668"	"HCD"	"MS2"	"3.179842"	"299.6"	"100.000"	"55.6315"	"17119"	"17119"	"17099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"465.9"	""	"431.8"	""	"448.8"	""	"461.3"	""	"514.0"	"514.8"	""	"501"	"72"	"33.000"	"26.000"	"1.64364389208878E-06"	""	"0"	"4.565E-05"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASYLDKVR"	"[R].lASYLDkVR.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV3; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"508.31567"	"1522.93247"	"1522.93573"	"-2.14"	"-0.00109"	"11/74"	"11"	"74"	"15370921.7383423"	"HCD"	"MS2"	"8.549087"	"685.6"	"100.000"	"44.6443"	"12710"	"12710"	"12692"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1238.8"	""	"924.5"	""	"1089.3"	""	"1023.5"	"4.9"	"992.3"	"1202.4"	""	"448"	"10"	"33.000"	"26.000"	"2.20926604781391"	"13"	"0.0003146"	"0.001435"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASYLDKVR"	"[R].lASYLDkVR.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV3; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"508.31601"	"1522.93348"	"1522.93573"	"-1.48"	"-0.00075"	"12/74"	"12"	"74"	"13957468.4613647"	"HCD"	"MS2"	"12.82243"	"610.4"	"100.000"	"44.3369"	"12536"	"12536"	"12518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1145.1"	""	"860.5"	""	"995.1"	""	"906.3"	""	"839.4"	"1014.5"	""	"442"	"13"	"33.000"	"26.000"	"1.08991410674041"	"13"	"0.0006037"	"0.004824"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSILGATLK"	"[R].vYSILGATLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"508.32471"	"1522.95957"	"1522.96089"	"-0.87"	"-0.00044"	"8/82"	"8"	"82"	"6805495.1628418"	"HCD"	"MS2"	"10.86692"	"165.1"	"100.000"	"64.5041"	"20792"	"20792"	"20771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.0"	""	"175.8"	""	"205.7"	""	"295.1"	""	"347.2"	"363.5"	""	"260"	"46"	"31.000"	"24.000"	"0.000334151451759953"	""	"0"	"6.666E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSILGATLK"	"[R].vYSILGATLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"761.98358"	"1522.95989"	"1522.96089"	"-0.66"	"-0.00050"	"9/82"	"9"	"82"	"1376146.21417236"	"HCD"	"MS2"	"11.30676"	"96.2"	"100.000"	"64.6630"	"20857"	"20857"	"20835"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.4"	""	"131.3"	""	"136.0"	""	"144.0"	""	"179.4"	"214.5"	""	"260"	"41"	"31.000"	"24.000"	"0.000959275499167831"	"16"	"0"	"6.505E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSILGATLK"	"[R].vYSILGATLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"761.98370"	"1522.96013"	"1522.96089"	"-0.50"	"-0.00038"	"16/82"	"16"	"82"	"3816842.3972168"	"HCD"	"MS2"	"18.23311"	"264.7"	"100.000"	"64.3518"	"20730"	"20730"	"20707"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"324.7"	""	"308.4"	""	"340.7"	""	"463.8"	"1.8"	"528.7"	"544.8"	""	"260"	"60"	"31.000"	"24.000"	"1.38977134298946E-05"	"22"	"0"	"5.371E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSILGATLK"	"[R].vYSILGATLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.9831"	"0.0000"	"1"	"1"	"1"	"761.98407"	"1522.96086"	"1522.96089"	"-0.02"	"-0.00001"	"16/82"	"16"	"82"	"1090610.55560303"	"HCD"	"MS2"	"17.26086"	"91.2"	"100.000"	"64.6481"	"20798"	"20798"	"20777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.9"	""	"96.8"	""	"118.9"	""	"143.0"	""	"187.1"	"210.2"	""	"260"	"59"	"31.000"	"24.000"	"1.74157969365372E-05"	"17"	"0"	"3.565E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSILGATLK"	"[R].vYSILGATLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"761.98407"	"1522.96086"	"1522.96089"	"-0.02"	"-0.00001"	"16/82"	"16"	"82"	"3866231.7711792"	"HCD"	"MS2"	"9.209791"	"268.8"	"100.000"	"64.3372"	"20671"	"20671"	"20649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.9"	""	"313.3"	""	"338.3"	""	"460.7"	""	"560.3"	"560.5"	""	"260"	"62"	"31.000"	"24.000"	"7.90575501662334E-06"	"22"	"0"	"3.448E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSILGATLK"	"[R].vYSILGATLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"508.32520"	"1522.96103"	"1522.96089"	"0.10"	"0.00005"	"8/82"	"8"	"82"	"8342683.1541748"	"HCD"	"MS2"	"9.798862"	"214.0"	"100.000"	"64.4086"	"20700"	"20700"	"20681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"236.7"	""	"236.1"	""	"305.2"	""	"344.1"	""	"448.8"	"468.2"	""	"260"	"49"	"31.000"	"24.000"	"0.000180693842057736"	""	"0"	"6.562E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CVNTTLQIK"	"[K].cVNTTLQIk.[G]"	"N-Term(TMT6plex); C1(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"762.43774"	"1523.86821"	"1523.86898"	"-0.50"	"-0.00038"	"14/78"	"14"	"78"	"927977.289611816"	"HCD"	"MS2"	"11.75829"	"94.7"	"100.000"	"47.6915"	"13951"	"13951"	"13922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.1"	""	"149.1"	""	"132.0"	""	"170.8"	""	"165.8"	"158.6"	""	"873"	"39"	"36.000"	"29.000"	"0.00566218751784497"	"20"	"0"	"7.792E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSLGSTINVK"	"[K].fSLGSTINVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8714"	"0.0000"	"1"	"1"	"1"	"762.46350"	"1523.91973"	"1523.91975"	"-0.02"	"-0.00001"	"9/84"	"9"	"84"	"3792363.29418945"	"HCD"	"MS2"	"15.64669"	"318.6"	"100.000"	"52.8326"	"16046"	"16046"	"16022"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"564.6"	""	"558.8"	""	"367.4"	""	"527.2"	""	"508.8"	"485.6"	""	"443"	"70"	"33.000"	"26.000"	"2.25099085470859E-06"	"26"	"0"	"3.674E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSLGSTINVK"	"[K].fSLGSTINVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"508.64487"	"1523.92005"	"1523.91975"	"0.20"	"0.00010"	"8/84"	"8"	"84"	"6388603.03967285"	"HCD"	"MS2"	"18.69575"	"192.0"	"100.000"	"52.6756"	"15932"	"15932"	"15906"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.1"	""	"361.6"	""	"235.1"	""	"310.8"	"0.1"	"289.3"	"292.5"	""	"432"	"56"	"33.000"	"26.000"	"5.90818044882249E-05"	"24"	"7.476E-05"	"0.0001913"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSLGSTINVK"	"[K].fSLGSTINVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"508.64490"	"1523.92014"	"1523.91975"	"0.26"	"0.00013"	"8/84"	"8"	"84"	"6868094.61016846"	"HCD"	"MS2"	"20.0302"	"207.9"	"100.000"	"52.8371"	"16048"	"16048"	"16022"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"358.7"	""	"361.0"	""	"261.1"	""	"354.5"	"0.4"	"331.4"	"297.3"	""	"432"	"56"	"33.000"	"26.000"	"5.92180021136423E-05"	"22"	"0.0001308"	"0.0002772"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSLGSTINVK"	"[K].fSLGSTINVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"762.46393"	"1523.92058"	"1523.91975"	"0.54"	"0.00041"	"9/84"	"9"	"84"	"3590578.95330811"	"HCD"	"MS2"	"0"	"301.2"	"100.000"	"52.6688"	"15929"	"15929"	"15906"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"532.6"	""	"541.7"	""	"333.1"	""	"483.3"	""	"494.6"	"463.5"	""	"432"	"70"	"33.000"	"26.000"	"2.17998623392564E-06"	"21"	"0"	"6.277E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILDLPLVIGSR"	"[K].vILDLPLVIGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"508.66162"	"1523.97031"	"1523.97223"	"-1.26"	"-0.00064"	"12/102"	"12"	"102"	"491753.85736084"	"HCD"	"MS2"	"22.25899"	"9.1"	"100.000"	"81.6912"	"27786"	"27786"	"27758"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.5"	""	"8.4"	""	"15.6"	""	"15.3"	""	"18.1"	"19.7"	""	"185"	"46"	"29.000"	"22.000"	"0.000232885115817694"	"15"	"0"	"0.0001534"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILDLPLVIGSR"	"[K].vILDLPLVIGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"762.48926"	"1523.97124"	"1523.97223"	"-0.65"	"-0.00050"	"10/102"	"10"	"102"	"672091.561096191"	"HCD"	"MS2"	"36.67145"	"29.8"	"100.000"	"81.6569"	"27721"	"27721"	"27696"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.7"	""	"43.6"	""	"39.8"	""	"60.5"	"1.0"	"57.5"	"48.7"	""	"171"	"23"	"29.000"	"22.000"	"0.0417797767238123"	"18"	"0.0003839"	"0.002079"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILDLPLVIGSR"	"[K].vILDLPLVIGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"762.48938"	"1523.97148"	"1523.97223"	"-0.49"	"-0.00037"	"5/102"	"5"	"102"	"626858.47668457"	"HCD"	"MS2"	"28.25503"	"29.2"	"100.000"	"81.6428"	"27766"	"27766"	"27742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.8"	""	"40.1"	""	"32.9"	""	"54.0"	"0.4"	"57.8"	"55.9"	""	"171"	"30"	"29.000"	"22.000"	"0.00837463937524438"	"17"	"0.0001308"	"0.0002979"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILDLPLVIGSR"	"[K].vILDLPLVIGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"508.66202"	"1523.97150"	"1523.97223"	"-0.48"	"-0.00024"	"11/102"	"11"	"102"	"361691.308837891"	"HCD"	"MS2"	"12.61448"	"7.6"	"100.000"	"81.7491"	"27759"	"27759"	"27728"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"7.7"	""	"11.8"	""	"17.3"	""	"12.7"	"14.2"	""	"171"	"45"	"29.000"	"22.000"	"0.00026361256974632"	"16"	"0.0001308"	"0.000279"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLDAFPNLK"	"[K].cLDAFPNLk.[D]"	"N-Term(TMT6plex); C1(Methylthio); K9(TMT6plex)"	"2"	"2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"508.94778"	"1524.82880"	"1524.83186"	"-2.01"	"-0.00102"	"9/68"	"9"	"68"	"1194845.22509766"	"HCD"	"MS2"	"33.80743"	"41.7"	"100.000"	"65.4651"	"21185"	"21185"	"21155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.3"	""	"45.3"	""	"52.0"	""	"68.2"	""	"100.0"	"81.5"	""	"888"	"11"	"36.000"	"29.000"	"3.54309641146981"	"16"	"0.000523"	"0.002842"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLDAFPNLK"	"[K].cLDAFPNLk.[D]"	"N-Term(TMT6plex); C1(Methylthio); K9(TMT6plex)"	"2"	"2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"508.94821"	"1524.83008"	"1524.83186"	"-1.17"	"-0.00059"	"10/68"	"10"	"68"	"3568707.28033447"	"HCD"	"MS2"	"12.47829"	"103.0"	"100.000"	"65.1321"	"20996"	"20996"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.7"	""	"139.2"	""	"131.1"	""	"185.0"	"1.4"	"199.2"	"185.8"	""	"880"	"36"	"36.000"	"29.000"	"0.0104822056651782"	"17"	"0.0006037"	"0.005965"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLDAFPNLK"	"[K].cLDAFPNLk.[D]"	"N-Term(TMT6plex); C1(Methylthio); K9(TMT6plex)"	"2"	"2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"508.94839"	"1524.83063"	"1524.83186"	"-0.81"	"-0.00041"	"10/68"	"10"	"68"	"5213809.65576172"	"HCD"	"MS2"	"0"	"143.5"	"100.000"	"65.1356"	"21050"	"21050"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.8"	""	"184.5"	""	"187.4"	""	"258.6"	"3.9"	"298.2"	"255.5"	""	"887"	"32"	"36.000"	"29.000"	"0.0280474656085353"	"15"	"0.0006037"	"0.003683"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLDAFPNLK"	"[K].cLDAFPNLk.[D]"	"N-Term(TMT6plex); C1(Methylthio); K9(TMT6plex)"	"2"	"2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"762.91907"	"1524.83086"	"1524.83186"	"-0.66"	"-0.00050"	"8/68"	"8"	"68"	"3503343.89257813"	"HCD"	"MS2"	"20.07409"	"249.0"	"100.000"	"65.1333"	"21049"	"21049"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.7"	""	"319.1"	""	"329.2"	""	"469.1"	""	"459.7"	"454.0"	""	"884"	"53"	"36.000"	"29.000"	"0.000223574500605376"	"23"	"0"	"9.546E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLDAFPNLK"	"[K].cLDAFPNLk.[D]"	"N-Term(TMT6plex); C1(Methylthio); K9(TMT6plex)"	"2"	"2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"762.91919"	"1524.83110"	"1524.83186"	"-0.50"	"-0.00038"	"14/68"	"14"	"68"	"2790906.41790771"	"HCD"	"MS2"	"36.89366"	"211.7"	"100.000"	"65.1555"	"21005"	"21005"	"20985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.1"	""	"268.7"	""	"299.7"	""	"380.7"	""	"408.6"	"380.6"	""	"885"	"41"	"36.000"	"29.000"	"0.00318356172766637"	"22"	"0"	"0.0001258"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLDAFPNLK"	"[K].cLDAFPNLk.[D]"	"N-Term(TMT6plex); C1(Methylthio); K9(TMT6plex)"	"2"	"2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P08010; P04905"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"508.94882"	"1524.83191"	"1524.83186"	"0.03"	"0.00002"	"8/68"	"8"	"68"	"1453502.86505127"	"HCD"	"MS2"	"16.11251"	"48.4"	"100.000"	"65.4341"	"21119"	"21119"	"21097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.7"	""	"59.5"	""	"63.2"	""	"88.9"	"0.3"	"109.2"	"85.9"	""	"894"	"25"	"36.000"	"29.000"	"0.13283347161869"	"15"	"0.0003146"	"0.001469"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNLETEWK"	"[R].fNLETEWk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"762.92700"	"1524.84673"	"1524.84625"	"0.31"	"0.00024"	"7/72"	"7"	"72"	"942201.608764648"	"HCD"	"MS2"	"0"	"95.1"	"100.000"	"56.8021"	"17652"	"17652"	"17621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.0"	""	"131.4"	""	"124.7"	""	"155.7"	""	"179.5"	"173.3"	""	"899"	"27"	"36.000"	"29.000"	"0.0884564887223227"	"27"	"0.0001859"	"0.0003745"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSFVNDLTITR"	"[K].mSFVNDLTITR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"763.41614"	"1525.82500"	"1525.82458"	"0.27"	"0.00021"	"9/108"	"9"	"108"	"4497739.59814453"	"HCD"	"MS2"	"44.27819"	"157.6"	"100.000"	"58.2809"	"18256"	"18256"	"18229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"225.5"	""	"256.5"	""	"259.1"	""	"250.4"	"2.7"	"230.2"	"264.3"	""	"915"	"18"	"36.000"	"29.000"	"0.661288695116262"	"24"	"0.0001889"	"0.000841"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYNNVSNFGR"	"[K].lLYNNVSNFGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9815"	"0.0000"	"1"	"1"	"1"	"763.41876"	"1525.83025"	"1525.83244"	"-1.44"	"-0.00110"	"8/94"	"8"	"94"	"3304107.72747803"	"HCD"	"MS2"	"0"	"171.4"	"100.000"	"48.2747"	"14189"	"14189"	"14175"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.6"	""	"220.0"	""	"208.7"	""	"275.5"	"3.1"	"337.3"	"350.0"	""	"889"	"54"	"36.000"	"29.000"	"0.000180248544006807"	"17"	"0"	"2.275E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYNNVSNFGR"	"[K].lLYNNVSNFGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"763.41913"	"1525.83098"	"1525.83244"	"-0.96"	"-0.00073"	"10/94"	"10"	"94"	"3322576.04394531"	"HCD"	"MS2"	"0"	"182.2"	"100.000"	"47.9932"	"14026"	"14026"	"14006"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.1"	""	"210.6"	""	"239.1"	""	"321.0"	"7.8"	"357.6"	"370.4"	""	"900"	"46"	"36.000"	"29.000"	"0.00107699209038242"	"16"	"0"	"1.661E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYNNVSNFGR"	"[K].lLYNNVSNFGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"763.41986"	"1525.83245"	"1525.83244"	"0.00"	"0.00000"	"10/94"	"10"	"94"	"8207000.23687744"	"HCD"	"MS2"	"32.5343"	"380.4"	"100.000"	"47.9628"	"14062"	"14062"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"489.4"	""	"441.8"	""	"456.6"	""	"717.3"	"0.8"	"744.8"	"758.7"	""	"913"	"53"	"36.000"	"29.000"	"0.00022000916961587"	"17"	"0"	"2.36E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYNNVSNFGR"	"[K].lLYNNVSNFGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"763.42017"	"1525.83306"	"1525.83244"	"0.40"	"0.00031"	"10/94"	"10"	"94"	"8202540.43273926"	"HCD"	"MS2"	"22.05957"	"388.3"	"100.000"	"47.6877"	"13901"	"13901"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"497.1"	""	"488.3"	""	"486.2"	""	"694.0"	"2.1"	"735.5"	"780.4"	""	"912"	"48"	"36.000"	"29.000"	"0.000665219302685558"	"16"	"0"	"3.863E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVYGYVVNLR"	"[K].vDVYGYVVNLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"763.43280"	"1525.85832"	"1525.85759"	"0.48"	"0.00036"	"6/84"	"6"	"84"	"978785.179504395"	"HCD"	"MS2"	"43.04235"	"55.3"	"100.000"	"63.3782"	"20280"	"20280"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.4"	""	"77.7"	""	"78.4"	""	"87.9"	""	"98.2"	"105.8"	""	"771"	"20"	"35.000"	"28.000"	"0.345958800280039"	"19"	"0"	"0.0001242"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVLAIYTIYR"	"[R].nAVLAIYTIYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.44958"	"1525.89189"	"1525.89398"	"-1.37"	"-0.00104"	"6/100"	"6"	"100"	"1056858.03369141"	"HCD"	"MS2"	"48.91235"	"76.1"	"100.000"	"62.9556"	"20160"	"20160"	"20131"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.1"	""	"118.3"	""	"119.8"	""	"118.3"	"2.2"	"131.7"	"136.1"	""	"613"	"35"	"34.000"	"27.000"	"0.00898318779669224"	"15"	"0"	"3.448E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYCFQGNK"	"[R].yYcFQGNk.[F]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"763.88007"	"1526.75286"	"1526.75361"	"-0.50"	"-0.00038"	"7/64"	"7"	"64"	"4095266.73651123"	"HCD"	"MS2"	"21.53573"	"382.9"	"100.000"	"45.2485"	"12908"	"12908"	"12880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"567.6"	""	"567.5"	""	"498.3"	""	"680.7"	""	"694.4"	"622.4"	""	"628"	"4"	"34.000"	"27.000"	"13.6750728337268"	"15"	"0.0003146"	"0.001461"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYCFQGNK"	"[R].yYcFQGNk.[F]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"763.88037"	"1526.75347"	"1526.75361"	"-0.10"	"-0.00007"	"12/64"	"12"	"64"	"4225998.24291992"	"HCD"	"MS2"	"17.00445"	"398.5"	"100.000"	"45.4738"	"13049"	"13049"	"13019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"601.8"	""	"577.1"	""	"521.1"	""	"693.3"	""	"721.6"	"658.2"	""	"659"	"8"	"35.000"	"28.000"	"4.89615794133569"	"15"	"0.0002723"	"0.001365"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFIPHGLIMDR"	"[K].vFIPHGLIMDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"509.62827"	"1526.87024"	"1526.87147"	"-0.80"	"-0.00041"	"5/80"	"5"	"80"	"4611184.67675781"	"HCD"	"MS2"	"6.960474"	"97.2"	"100.000"	"51.6123"	"15547"	"15547"	"15526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.3"	""	"139.2"	""	"142.2"	""	"150.5"	"0.5"	"169.8"	"192.4"	""	"712"	"32"	"35.000"	"28.000"	"0.02412403767094"	"25"	"0.0001308"	"0.0002621"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFIPHGLIMDR"	"[K].vFIPHGLIMDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"509.62860"	"1526.87125"	"1526.87147"	"-0.14"	"-0.00007"	"5/80"	"5"	"80"	"4865631.63146973"	"HCD"	"MS2"	"9.721058"	"91.9"	"100.000"	"51.4148"	"15416"	"15416"	"15394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.2"	""	"133.1"	""	"119.5"	""	"132.2"	""	"182.3"	"187.1"	""	"725"	"30"	"35.000"	"28.000"	"0.0373514968660086"	"24"	"0.0001308"	"0.0002666"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFIPHGLIMDR"	"[K].vFIPHGLIMDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"509.62863"	"1526.87134"	"1526.87147"	"-0.08"	"-0.00004"	"6/80"	"6"	"80"	"10645682.5933228"	"HCD"	"MS2"	"14.32669"	"110.2"	"100.000"	"51.3176"	"15427"	"15427"	"15398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.9"	""	"176.9"	""	"162.8"	""	"125.5"	"1.0"	"202.1"	"194.8"	""	"723"	"41"	"35.000"	"28.000"	"0.00312685902637413"	"26"	"0"	"0.000125"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFIPHGLIMDR"	"[K].vFIPHGLIMDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"0.6977"	"0.0000"	"1"	"1"	"1"	"509.62924"	"1526.87317"	"1526.87147"	"1.11"	"0.00057"	"6/80"	"6"	"80"	"8806422.66992188"	"HCD"	"MS2"	"25.35439"	"103.9"	"100.000"	"51.1108"	"15292"	"15292"	"15266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.5"	""	"159.3"	""	"165.7"	""	"126.4"	""	"173.2"	"193.0"	""	"694"	"43"	"35.000"	"28.000"	"0.00173112917148624"	"28"	"0"	"6.269E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIKPQVDR"	"[K].vNIkPQVDR.[Y]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"509.65225"	"1526.94220"	"1526.94188"	"0.21"	"0.00011"	"7/78"	"7"	"78"	"21103018.3381348"	"HCD"	"MS2"	"16.56293"	"902.6"	"83.790"	"31.5437"	"7363"	"7363"	"7341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1650.5"	""	"1136.9"	""	"1190.1"	""	"1436.9"	"0.2"	"1547.4"	"1576.5"	""	"299"	"11"	"31.000"	"24.000"	"1.15515747471807"	"13"	"0.000523"	"0.003185"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNIKPQVDR"	"[K].vNIkPQVDR.[Y]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"509.65237"	"1526.94257"	"1526.94188"	"0.45"	"0.00023"	"7/78"	"7"	"78"	"21171121.2102661"	"HCD"	"MS2"	"15.89528"	"694.7"	"66.154"	"31.4314"	"7275"	"7275"	"7254"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1320.2"	""	"859.7"	""	"927.9"	""	"1084.4"	""	"1184.5"	"1195.3"	""	"297"	"10"	"31.000"	"24.000"	"1.60223588251129"	"15"	"0.0006037"	"0.005842"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEVPPIVYLR"	"[K].vLEVPPIVYLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64559"	"Cytosolic acyl coenzyme A thioester hydrolase OS=Rattus norvegicus OX=10116 GN=Acot7 PE=1 SV=4"	"Q64559"	"Cytosolic acyl coenzyme A thioester hydrolase OS=Rattus norvegicus OX=10116 GN=Acot7 PE=1 SV=4"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"509.65491"	"1526.95017"	"1526.95077"	"-0.39"	"-0.00020"	"10/80"	"10"	"80"	"852968.785461426"	"HCD"	"MS2"	"12.96148"	"16.9"	"100.000"	"74.8524"	"24956"	"24956"	"24929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.3"	""	"26.7"	""	"22.5"	""	"30.7"	""	"29.8"	"34.6"	""	"277"	"36"	"31.000"	"24.000"	"0.00368510420782135"	"19"	"0.0001859"	"0.0003744"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEVPPIVYLR"	"[K].vLEVPPIVYLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64559"	"Cytosolic acyl coenzyme A thioester hydrolase OS=Rattus norvegicus OX=10116 GN=Acot7 PE=1 SV=4"	"Q64559"	"Cytosolic acyl coenzyme A thioester hydrolase OS=Rattus norvegicus OX=10116 GN=Acot7 PE=1 SV=4"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"763.97882"	"1526.95036"	"1526.95077"	"-0.26"	"-0.00020"	"8/80"	"8"	"80"	"1048767.24926758"	"HCD"	"MS2"	"21.11133"	"46.8"	"100.000"	"74.6426"	"24870"	"24870"	"24849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.1"	""	"64.2"	""	"70.5"	""	"78.2"	"1.4"	"84.7"	"80.4"	""	"277"	"16"	"31.000"	"24.000"	"0.326174325819597"	"19"	"0.0008731"	"0.009005"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEVPPIVYLR"	"[K].vLEVPPIVYLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64559"	"Cytosolic acyl coenzyme A thioester hydrolase OS=Rattus norvegicus OX=10116 GN=Acot7 PE=1 SV=4"	"Q64559"	"Cytosolic acyl coenzyme A thioester hydrolase OS=Rattus norvegicus OX=10116 GN=Acot7 PE=1 SV=4"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"763.97894"	"1526.95061"	"1526.95077"	"-0.10"	"-0.00008"	"11/80"	"11"	"80"	"1161068.60235596"	"HCD"	"MS2"	"17.03665"	"47.2"	"100.000"	"74.6422"	"24922"	"24922"	"24895"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.9"	""	"61.7"	""	"67.3"	""	"71.5"	""	"80.4"	"89.2"	""	"277"	"33"	"31.000"	"24.000"	"0.00702182130960465"	""	"0.0001889"	"0.0007724"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLIVQPNTR"	"[R].kLIVQPNTR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"1"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"509.66425"	"1526.97818"	"1526.97827"	"-0.06"	"-0.00003"	"5/80"	"5"	"80"	"6852364.91540527"	"HCD"	"MS2"	"49.03619"	"395.7"	"100.000"	"30.8647"	"7087"	"7087"	"7056"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"687.1"	""	"520.7"	""	"556.5"	""	"618.1"	"7.5"	"676.3"	"676.5"	""	"157"	"9"	"28.000"	"21.000"	"1.02770780955453"	"18"	"0.002829"	"0.04788"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9028"	"0.0000"	"1"	"1"	"1"	"764.40118"	"1527.79509"	"1527.79645"	"-0.89"	"-0.00068"	"12/128"	"12"	"128"	"8428851.27313232"	"HCD"	"MS2"	"0"	"321.2"	"100.000"	"37.4036"	"9755"	"9755"	"9729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.3"	""	"314.8"	""	"369.8"	""	"636.4"	"11.3"	"651.8"	"637.3"	""	"762"	"72"	"35.000"	"28.000"	"2.22805022059047E-06"	"24"	"0"	"2.857E-06"	"1.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9041"	"0.0000"	"1"	"1"	"1"	"764.40131"	"1527.79534"	"1527.79645"	"-0.73"	"-0.00056"	"11/128"	"11"	"128"	"7212667.34277344"	"HCD"	"MS2"	"0"	"275.2"	"100.000"	"37.2920"	"9666"	"9666"	"9640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"339.7"	""	"289.0"	""	"309.3"	""	"562.7"	"5.9"	"544.9"	"561.4"	""	"762"	"73"	"35.000"	"28.000"	"1.73750064977444E-06"	"24"	"0"	"1.489E-06"	"1.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISFTGSTATGK"	"[K].iSFTGSTATGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51650"	"Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2"	"P51650"	"Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"764.44159"	"1527.87590"	"1527.87828"	"-1.56"	"-0.00119"	"9/94"	"9"	"94"	"1157795.5425415"	"HCD"	"MS2"	"0"	"106.2"	"100.000"	"39.0088"	"10371"	"10371"	"10342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.8"	""	"143.6"	""	"154.6"	""	"177.2"	""	"193.0"	"200.3"	""	"678"	"47"	"35.000"	"28.000"	"0.00075718098353955"	"20"	"0"	"1.132E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSSAYINTK"	"[R].sVSSAYINTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"764.44263"	"1527.87798"	"1527.87828"	"-0.20"	"-0.00015"	"16/92"	"16"	"92"	"1052786.73736572"	"HCD"	"MS2"	"0"	"85.5"	"100.000"	"35.2032"	"8809"	"8809"	"8779"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.2"	""	"130.1"	""	"115.9"	""	"142.2"	"2.5"	"135.4"	"127.0"	""	"666"	"38"	"35.000"	"28.000"	"0.00537581399423219"	"16"	"0"	"3.798E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWFFLISK"	"[R].eWFFLISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"764.45203"	"1527.89678"	"1527.89756"	"-0.51"	"-0.00039"	"9/68"	"9"	"68"	"313409.45880127"	"HCD"	"MS2"	"33.08546"	"23.2"	"100.000"	"81.4444"	"27685"	"27685"	"27662"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.6"	""	"32.9"	""	"36.2"	""	"34.9"	""	"41.3"	"43.3"	""	"551"	"13"	"34.000"	"27.000"	"1.42600682202381"	"15"	"0.0002277"	"0.001283"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWFFLISK"	"[R].eWFFLISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.45270"	"1527.89812"	"1527.89756"	"0.37"	"0.00028"	"7/68"	"7"	"68"	"468094.690673828"	"HCD"	"MS2"	"60.55865"	"31.5"	"100.000"	"81.3407"	"27592"	"27592"	"27568"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.7"	""	"45.1"	""	"46.2"	""	"49.8"	"1.8"	"57.1"	"57.4"	""	"539"	"9"	"34.000"	"27.000"	"3.57732806358165"	"13"	"0.0004166"	"0.002462"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILLFDAHK"	"[R].iILLFDAHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.6591"	"0.0000"	"1"	"1"	"1"	"509.99323"	"1527.96512"	"1527.96631"	"-0.78"	"-0.00039"	"8/64"	"8"	"64"	"9573196.89599609"	"HCD"	"MS2"	"14.04808"	"236.9"	"100.000"	"61.1801"	"19435"	"19435"	"19411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"283.8"	""	"329.2"	""	"442.1"	""	"395.1"	"1.8"	"390.2"	"399.0"	""	"274"	"44"	"31.000"	"24.000"	"0.000541652269493335"	""	"0"	"0.0001083"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILLFDAHK"	"[R].iILLFDAHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"509.99335"	"1527.96549"	"1527.96631"	"-0.54"	"-0.00027"	"7/64"	"7"	"64"	"7255726.05877686"	"HCD"	"MS2"	"3.241479"	"183.2"	"100.000"	"61.4752"	"19556"	"19556"	"19539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.2"	""	"288.2"	""	"317.3"	""	"290.2"	"2.8"	"296.3"	"295.7"	""	"269"	"40"	"31.000"	"24.000"	"0.00126392785270944"	"24"	"0.0001308"	"0.0002307"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILLFDAHK"	"[R].iILLFDAHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.6585"	"0.0000"	"1"	"1"	"1"	"509.99371"	"1527.96659"	"1527.96631"	"0.18"	"0.00009"	"8/64"	"8"	"64"	"8844064.99768066"	"HCD"	"MS2"	"13.45873"	"234.2"	"100.000"	"61.0145"	"19314"	"19314"	"19289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.8"	"2.8"	"358.5"	""	"416.4"	""	"371.3"	"3.3"	"369.6"	"389.7"	""	"268"	"41"	"31.000"	"24.000"	"0.000981984874406132"	""	"0"	"3.958E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILLFDAHK"	"[R].iILLFDAHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"509.99390"	"1527.96714"	"1527.96631"	"0.54"	"0.00028"	"7/64"	"7"	"64"	"7421834.54888916"	"HCD"	"MS2"	"3.953784"	"197.6"	"100.000"	"61.3139"	"19436"	"19436"	"19417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.8"	""	"326.4"	""	"343.7"	""	"316.7"	"0.2"	"324.5"	"326.5"	""	"268"	"40"	"31.000"	"24.000"	"0.00125344360335772"	"24"	"7.476E-05"	"0.0002004"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILILGLDGAGK"	"[R].iLILGLDGAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P61212"	"ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1"	"P61212"	"ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"764.49640"	"1527.98552"	"1527.98744"	"-1.25"	"-0.00096"	"10/80"	"10"	"80"	"2154726.62921143"	"HCD"	"MS2"	"55.25395"	"111.0"	"100.000"	"68.7594"	"22469"	"22469"	"22442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.9"	""	"161.2"	""	"201.2"	""	"177.3"	""	"174.1"	"160.0"	""	"182"	"43"	"29.000"	"22.000"	"0.000486453567051244"	""	"0"	"2.429E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILILGLDGAGK"	"[R].iLILGLDGAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P61212"	"ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1"	"P61212"	"ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"510.00021"	"1527.98609"	"1527.98744"	"-0.88"	"-0.00045"	"8/80"	"8"	"80"	"2248881.86071777"	"HCD"	"MS2"	"35.27807"	"71.9"	"100.000"	"68.6380"	"22471"	"22471"	"22442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.8"	""	"123.6"	""	"118.9"	""	"118.7"	""	"116.0"	"106.1"	""	"179"	"50"	"29.000"	"22.000"	"9.50217523692858E-05"	"22"	"0"	"6.889E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGEVINALK"	"[K].iLGEVINALk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"764.49677"	"1527.98625"	"1527.98744"	"-0.77"	"-0.00059"	"9/78"	"9"	"78"	"357385.241699219"	"HCD"	"MS2"	"32.94854"	"27.8"	"100.000"	"79.2838"	"26804"	"26804"	"26783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.3"	""	"31.1"	""	"43.1"	""	"41.4"	"0.7"	"59.6"	"52.9"	""	"179"	"41"	"29.000"	"22.000"	"0.000753048651772449"	"22"	"0"	"1.739E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILILGLDGAGK"	"[R].iLILGLDGAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P61212"	"ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1"	"P61212"	"ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1"	"0"	"2"	"2"	"0.6727"	"0.0000"	"1"	"1"	"1"	"764.49701"	"1527.98674"	"1527.98744"	"-0.45"	"-0.00035"	"15/80"	"15"	"80"	"2553442.31689453"	"HCD"	"MS2"	"32.88619"	"141.2"	"100.000"	"68.6960"	"22494"	"22494"	"22474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.0"	""	"210.8"	""	"253.2"	""	"225.4"	"3.3"	"232.3"	"194.8"	""	"177"	"55"	"29.000"	"22.000"	"2.77935019408045E-05"	""	"0"	"2.079E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGEVINALK"	"[K].iLGEVINALk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"510.00055"	"1527.98709"	"1527.98744"	"-0.22"	"-0.00011"	"10/78"	"10"	"78"	"347865.671508789"	"HCD"	"MS2"	"20.85032"	"15.2"	"100.000"	"79.3954"	"26799"	"26799"	"26769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.3"	""	"15.2"	""	"22.2"	""	"31.8"	""	"29.3"	"31.3"	""	"177"	"40"	"29.000"	"22.000"	"0.000909794423841929"	""	"0.0001859"	"0.000325"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGEVINALK"	"[K].iLGEVINALk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"764.49774"	"1527.98821"	"1527.98744"	"0.50"	"0.00039"	"16/78"	"16"	"78"	"417329.211120605"	"HCD"	"MS2"	"33.4308"	"35.3"	"100.000"	"79.3793"	"26792"	"26792"	"26769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.5"	""	"44.9"	""	"46.8"	""	"61.1"	"0.2"	"62.8"	"70.9"	""	"166"	"57"	"29.000"	"22.000"	"1.77450853428685E-05"	""	"7.476E-05"	"0.000191"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILILGLDGAGK"	"[R].iLILGLDGAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P61212"	"ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1"	"P61212"	"ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"510.00095"	"1527.98828"	"1527.98744"	"0.56"	"0.00028"	"7/80"	"7"	"80"	"2635538.21136475"	"HCD"	"MS2"	"8.958682"	"84.5"	"100.000"	"68.7963"	"22484"	"22484"	"22458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.0"	""	"121.8"	""	"153.8"	""	"146.8"	""	"143.4"	"119.1"	""	"166"	"50"	"29.000"	"22.000"	"8.99659338637599E-05"	"22"	"0"	"4.548E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFIDSQWK"	"[K].fFIDSQWk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64633"	"UDP-glucuronosyltransferase 1-7 OS=Rattus norvegicus OX=10116 GN=Ugt1a7c PE=2 SV=1"	"Q64633"	"UDP-glucuronosyltransferase 1-7 OS=Rattus norvegicus OX=10116 GN=Ugt1a7c PE=2 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"764.93213"	"1528.85698"	"1528.85642"	"0.37"	"0.00028"	"8/62"	"8"	"62"	"1859889.45843506"	"HCD"	"MS2"	"59.03788"	"136.8"	"100.000"	"64.2043"	"20670"	"20670"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.3"	""	"157.5"	""	"175.0"	""	"312.7"	""	"249.3"	"250.6"	""	"799"	"4"	"36.000"	"29.000"	"15.0493167694072"	"16"	"0.0006037"	"0.004002"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFIDSQWK"	"[K].fFIDSQWk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64633"	"UDP-glucuronosyltransferase 1-7 OS=Rattus norvegicus OX=10116 GN=Ugt1a7c PE=2 SV=1"	"Q64633"	"UDP-glucuronosyltransferase 1-7 OS=Rattus norvegicus OX=10116 GN=Ugt1a7c PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"764.93323"	"1528.85918"	"1528.85642"	"1.80"	"0.00138"	"10/62"	"10"	"62"	"1315745.96051025"	"HCD"	"MS2"	"37.71738"	"114.8"	"100.000"	"64.1575"	"20598"	"20598"	"20569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.4"	""	"152.2"	""	"146.2"	""	"214.3"	"2.5"	"192.2"	"237.6"	""	"819"	"11"	"36.000"	"29.000"	"3.00091646320381"	"17"	"0.000523"	"0.002858"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDYSVSLLLR"	"[R].hPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"764.93640"	"1528.86553"	"1528.86849"	"-1.94"	"-0.00148"	"9/88"	"9"	"88"	"1260060.96044922"	"HCD"	"MS2"	"0"	"56.2"	"100.000"	"43.5276"	"12255"	"12255"	"12231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.1"	""	"77.2"	""	"73.2"	""	"95.0"	"2.6"	"107.8"	"103.6"	""	"810"	"38"	"36.000"	"29.000"	"0.00573396480882618"	"17"	"0"	"0.0001041"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDYSVSLLLR"	"[R].hPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"510.29364"	"1528.86637"	"1528.86849"	"-1.39"	"-0.00071"	"7/88"	"7"	"88"	"17508378.9749146"	"HCD"	"MS2"	"0"	"122.5"	"82.042"	"43.6581"	"12308"	"12308"	"12287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.9"	""	"153.1"	""	"143.9"	""	"215.9"	"1.6"	"240.2"	"250.7"	""	"791"	"65"	"35.000"	"28.000"	"1.361903976169E-05"	"17"	"0"	"8.414E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDYSVSLLLR"	"[R].hPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"510.29376"	"1528.86673"	"1528.86849"	"-1.15"	"-0.00059"	"10/88"	"10"	"88"	"26049030.3823242"	"HCD"	"MS2"	"2.925666"	"108.8"	"63.335"	"43.3348"	"12128"	"12128"	"12117"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.4"	""	"144.3"	""	"126.4"	""	"189.6"	"2.1"	"212.6"	"211.5"	""	"790"	"58"	"35.000"	"28.000"	"6.89599750403599E-05"	"18"	"0"	"1.01E-05"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDYSVSLLLR"	"[R].hPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"510.29382"	"1528.86692"	"1528.86849"	"-1.03"	"-0.00053"	"6/88"	"6"	"88"	"6315639.04376221"	"HCD"	"MS2"	"22.60679"	"184.3"	"100.000"	"43.8136"	"12322"	"12322"	"12303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.3"	""	"205.7"	""	"224.0"	""	"245.0"	""	"351.6"	"484.9"	""	"785"	"38"	"35.000"	"28.000"	"0.00674279041959354"	"15"	"0"	"8.152E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDYSVSLLLR"	"[R].hPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9857"	"0.0000"	"1"	"1"	"1"	"510.29385"	"1528.86701"	"1528.86849"	"-0.97"	"-0.00050"	"7/88"	"7"	"88"	"11011564.9274902"	"HCD"	"MS2"	"27.37113"	"122.4"	"100.000"	"43.3444"	"12182"	"12182"	"12166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.3"	""	"159.2"	""	"147.8"	""	"218.1"	"1.1"	"246.6"	"230.2"	""	"785"	"70"	"35.000"	"28.000"	"3.69691666635215E-06"	"18"	"0"	"1.354E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDYSVSLLLR"	"[R].hPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.93726"	"1528.86724"	"1528.86849"	"-0.82"	"-0.00063"	"10/88"	"10"	"88"	"1005839.65911865"	"HCD"	"MS2"	"0"	"47.5"	"100.000"	"43.4080"	"12158"	"12158"	"12127"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.9"	""	"58.6"	""	"56.3"	""	"95.0"	""	"81.2"	"91.4"	""	"785"	"46"	"35.000"	"28.000"	"0.00102763683072595"	"15"	"0.0001889"	"0.0004654"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDYSVSLLLR"	"[R].hPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"510.29459"	"1528.86921"	"1528.86849"	"0.47"	"0.00024"	"5/88"	"5"	"88"	"6538555.50402832"	"HCD"	"MS2"	"0"	"179.3"	"100.000"	"44.0522"	"12469"	"12469"	"12447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.6"	""	"213.9"	""	"259.4"	""	"261.8"	""	"358.3"	"362.9"	""	"773"	"28"	"35.000"	"28.000"	"0.0671660020311634"	"14"	"0"	"0.0001322"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQPPSILYGGR"	"[R].vLQPPSILYGGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"764.95532"	"1528.90337"	"1528.90488"	"-0.99"	"-0.00076"	"16/106"	"16"	"106"	"1277908.75317383"	"HCD"	"MS2"	"16.50378"	"80.0"	"100.000"	"56.3643"	"17473"	"17473"	"17445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.6"	""	"105.4"	""	"120.7"	""	"133.1"	"4.5"	"137.9"	"132.3"	""	"686"	"31"	"35.000"	"28.000"	"0.0278159642843867"	"21"	"0.0001889"	"0.0004729"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQPPSILYGGR"	"[R].vLQPPSILYGGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"764.95636"	"1528.90544"	"1528.90488"	"0.37"	"0.00028"	"9/106"	"9"	"106"	"1172756.5559082"	"HCD"	"MS2"	"27.27621"	"82.1"	"100.000"	"56.2047"	"17354"	"17354"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.2"	""	"108.8"	""	"117.1"	""	"128.6"	"6.0"	"144.7"	"154.6"	""	"666"	"30"	"35.000"	"28.000"	"0.0302304236549335"	"18"	"0.0001889"	"0.0004016"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPYLIEAIR"	"[R].lLVPYLIEAIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"510.32581"	"1528.96286"	"1528.96642"	"-2.32"	"-0.00118"	"11/80"	"11"	"80"	"294709.967529297"	"HCD"	"MS2"	"15.92255"	"3.2"	"100.000"	"88.7390"	"30611"	"30611"	"30598"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"3.4"	""	"4.1"	""	"8.5"	""	"6.1"	"4.9"	""	"347"	"39"	"32.000"	"25.000"	"0.00238396282664672"	""	"0.0001889"	"0.0004532"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPYLIEAIR"	"[R].lLVPYLIEAIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"764.98590"	"1528.96453"	"1528.96642"	"-1.24"	"-0.00095"	"6/80"	"6"	"80"	"213911.530334473"	"HCD"	"MS2"	"30.54053"	"10.3"	"100.000"	"88.6609"	"30581"	"30581"	"30563"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.3"	""	"16.5"	""	"21.4"	""	"15.3"	""	"15.7"	"10.3"	""	"368"	"26"	"32.000"	"25.000"	"0.0494103378001165"	"21"	"0.0006037"	"0.004837"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPYLIEAIR"	"[R].lLVPYLIEAIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.98608"	"1528.96489"	"1528.96642"	"-1.00"	"-0.00076"	"4/80"	"4"	"80"	"116373.679016113"	"HCD"	"MS2"	"8.169403"	"5.7"	"100.000"	"89.1839"	"30767"	"30767"	"30761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"6.4"	""	"11.2"	""	"8.8"	""	"7.5"	"8.7"	""	"368"	"19"	"32.000"	"25.000"	"0.247068752849367"	"14"	"0.001879"	"0.02674"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPYLIEAIR"	"[R].lLVPYLIEAIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"510.32654"	"1528.96506"	"1528.96642"	"-0.89"	"-0.00045"	"11/80"	"11"	"80"	"387151.038635254"	"HCD"	"MS2"	"22.9602"	"3.8"	"100.000"	"88.6018"	"30517"	"30517"	"30500"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	"4.4"	""	"7.7"	""	"6.9"	""	"6.3"	"6.3"	""	"368"	"44"	"32.000"	"25.000"	"0.000706021331705793"	"25"	"0.0001889"	"0.0003898"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPYLIEAIR"	"[R].lLVPYLIEAIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"510.32666"	"1528.96543"	"1528.96642"	"-0.65"	"-0.00033"	"11/80"	"11"	"80"	"345207.623046875"	"HCD"	"MS2"	"17.07829"	"2.9"	"100.000"	"89.0073"	"30709"	"30709"	"30702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"3.1"	""	"5.7"	""	"6.0"	""	"1.9"	"5.2"	""	"368"	"31"	"32.000"	"25.000"	"0.0153397337970013"	"20"	"0.0001889"	"0.0006444"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPYLIEAIR"	"[R].lLVPYLIEAIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"510.32672"	"1528.96561"	"1528.96642"	"-0.53"	"-0.00027"	"11/80"	"11"	"80"	"437670.96472168"	"HCD"	"MS2"	"13.04864"	"3.7"	"100.000"	"88.8765"	"30618"	"30618"	"30610"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"5.7"	""	"6.3"	""	"4.4"	""	"5.0"	"9.0"	""	"364"	"42"	"32.000"	"25.000"	"0.0012504645608259"	"25"	"0.0001889"	"0.00049"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPYLIEAIR"	"[R].lLVPYLIEAIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"764.98663"	"1528.96599"	"1528.96642"	"-0.28"	"-0.00021"	"9/80"	"9"	"80"	"666525.203735352"	"HCD"	"MS2"	"0.9128796"	"27.0"	"100.000"	"88.9254"	"30679"	"30679"	"30675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.2"	""	"48.0"	""	"53.5"	""	"39.8"	""	"26.5"	"39.4"	""	"363"	"36"	"32.000"	"25.000"	"0.00489639706988753"	"20"	"0.0003839"	"0.001659"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPYLIEAIR"	"[R].lLVPYLIEAIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"764.98669"	"1528.96611"	"1528.96642"	"-0.20"	"-0.00015"	"3/80"	"3"	"80"	"128279.560241699"	"HCD"	"MS2"	"8.488593"	"5.9"	"100.000"	"89.0831"	"30688"	"30688"	"30684"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.1"	""	"7.0"	""	"11.8"	""	"12.9"	""	"6.3"	"8.8"	""	"363"	"8"	"32.000"	"25.000"	"3.15410850418012"	"13"	"0.002711"	"0.04131"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPYLIEAIR"	"[R].lLVPYLIEAIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"764.98688"	"1528.96648"	"1528.96642"	"0.04"	"0.00003"	"10/80"	"10"	"80"	"803210.671630859"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"88.8262"	"30600"	"30600"	"30592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.8"	""	"70.4"	""	"59.8"	""	"46.3"	"1.0"	"25.1"	"42.3"	""	"363"	"40"	"32.000"	"25.000"	"0.00173730723940014"	"22"	"0.0001308"	"0.0003047"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPYLIEAIR"	"[R].lLVPYLIEAIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"764.98743"	"1528.96758"	"1528.96642"	"0.76"	"0.00058"	"4/80"	"4"	"80"	"237363.630126953"	"HCD"	"MS2"	"24.58496"	"11.3"	"100.000"	"88.5512"	"30497"	"30497"	"30479"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.8"	""	"20.5"	""	"17.7"	""	"20.4"	""	"14.1"	"13.4"	""	"357"	"16"	"32.000"	"25.000"	"0.463061016138208"	"13"	"0.0008453"	"0.008126"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQGLITNLAK"	"[K].iQGLITNLAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"510.33179"	"1528.98081"	"1528.98268"	"-1.23"	"-0.00063"	"11/88"	"11"	"88"	"8210495.32775879"	"HCD"	"MS2"	"25.24086"	"209.7"	"100.000"	"61.3924"	"19468"	"19468"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.5"	""	"485.8"	""	"297.8"	""	"366.4"	""	"262.2"	"210.0"	""	"283"	"43"	"31.000"	"24.000"	"0.000766931259918298"	""	"0.0001308"	"0.0002131"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQGLITNLAK"	"[K].iQGLITNLAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"510.33191"	"1528.98117"	"1528.98268"	"-0.99"	"-0.00050"	"7/88"	"7"	"88"	"9317121.1796875"	"HCD"	"MS2"	"10.5963"	"223.4"	"100.000"	"61.5974"	"19605"	"19605"	"19587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.6"	""	"536.0"	""	"305.8"	""	"383.9"	"1.2"	"286.2"	"218.1"	""	"281"	"44"	"31.000"	"24.000"	"0.000537868764360135"	"24"	"0.0001308"	"0.0002385"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQGLITNLAK"	"[K].iQGLITNLAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"764.99475"	"1528.98223"	"1528.98268"	"-0.30"	"-0.00023"	"9/88"	"9"	"88"	"3588462.62445068"	"HCD"	"MS2"	"15.33956"	"247.9"	"100.000"	"61.3531"	"19452"	"19452"	"19433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"432.6"	""	"611.1"	""	"313.0"	""	"437.4"	"1.4"	"296.0"	"242.6"	""	"265"	"66"	"31.000"	"24.000"	"3.32824952175019E-06"	""	"0"	"4.118E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQGLITNLAK"	"[K].iQGLITNLAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"764.99487"	"1528.98247"	"1528.98268"	"-0.14"	"-0.00011"	"18/88"	"18"	"88"	"1129477.08905029"	"HCD"	"MS2"	"20.15182"	"103.0"	"100.000"	"61.6668"	"19580"	"19580"	"19561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.6"	""	"205.0"	""	"158.5"	""	"167.9"	"1.5"	"147.1"	"134.1"	""	"264"	"68"	"31.000"	"24.000"	"2.10171551970754E-06"	""	"0"	"2.633E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQGLITNLAK"	"[K].iQGLITNLAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.8451"	"0.0000"	"1"	"1"	"1"	"764.99487"	"1528.98247"	"1528.98268"	"-0.14"	"-0.00011"	"9/88"	"9"	"88"	"2960283.83111572"	"HCD"	"MS2"	"31.50793"	"215.6"	"100.000"	"61.4891"	"19561"	"19561"	"19539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"380.4"	""	"515.4"	""	"267.0"	""	"379.8"	"2.2"	"263.7"	"221.7"	""	"264"	"71"	"31.000"	"24.000"	"1.16298451237058E-06"	""	"0"	"2.368E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQGLITNLAK"	"[K].iQGLITNLAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"764.99506"	"1528.98284"	"1528.98268"	"0.10"	"0.00008"	"9/88"	"9"	"88"	"1287112.44720459"	"HCD"	"MS2"	"2.940256"	"104.7"	"100.000"	"61.7958"	"19686"	"19686"	"19667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.5"	""	"233.9"	""	"156.1"	""	"173.3"	"0.9"	"145.5"	"110.5"	""	"264"	"65"	"31.000"	"24.000"	"3.94070505697171E-06"	""	"0"	"2.402E-05"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDLHFLQQMR"	"[R].iDLHFLQQMR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"510.61975"	"1529.84470"	"1529.84598"	"-0.84"	"-0.00043"	"7/78"	"7"	"78"	"3487434.86132813"	"HCD"	"MS2"	"0"	"43.3"	"100.000"	"57.7988"	"18005"	"18005"	"17979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.2"	""	"58.5"	""	"55.3"	""	"66.2"	""	"75.7"	"81.5"	""	"989"	"36"	"36.000"	"29.000"	"0.0125073785924262"	"19"	"0"	"4.65E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLMMYISK"	"[K].gPLmmYISk.[M]"	"N-Term(TMT6plex); M4(Oxidation); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.42688"	"1529.84648"	"1529.84718"	"-0.46"	"-0.00035"	"13/64"	"13"	"64"	"1785007.19750977"	"HCD"	"MS2"	"38.87936"	"105.8"	"100.000"	"44.3716"	"12600"	"12600"	"12572"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.0"	""	"88.5"	""	"119.8"	""	"365.6"	""	"164.2"	"168.8"	""	"989"	"23"	"36.000"	"29.000"	"0.275528352846839"	"14"	"0.002424"	"0.036"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIATDFTLK"	"[K].yIATDFTLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"765.45215"	"1529.89702"	"1529.89795"	"-0.61"	"-0.00047"	"7/70"	"7"	"70"	"1548005.7588501"	"HCD"	"MS2"	"8.896828"	"122.8"	"100.000"	"57.5259"	"17947"	"17947"	"17925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.0"	""	"166.7"	""	"184.7"	""	"186.1"	""	"217.4"	"243.7"	""	"763"	"34"	"35.000"	"28.000"	"0.0139795934728148"	"21"	"0"	"0.0001766"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIATDFTLK"	"[K].yIATDFTLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"765.45245"	"1529.89763"	"1529.89795"	"-0.21"	"-0.00016"	"8/70"	"8"	"70"	"1513843.51739502"	"HCD"	"MS2"	"13.67424"	"130.1"	"100.000"	"57.3156"	"17807"	"17807"	"17787"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.1"	""	"188.8"	""	"196.0"	""	"169.3"	""	"235.8"	"252.0"	""	"770"	"44"	"35.000"	"28.000"	"0.00144697400651051"	"19"	"0"	"0.0001081"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SISKPEGTPR"	"[K].sISkPEGTPR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"510.63925"	"1529.90320"	"1529.90516"	"-1.28"	"-0.00065"	"7/98"	"7"	"98"	"7025538.19299316"	"HCD"	"MS2"	"34.1473"	"441.6"	"100.000"	"27.5611"	"5771"	"5771"	"5746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"702.4"	""	"613.2"	""	"639.2"	""	"753.3"	""	"734.3"	"736.7"	""	"762"	"7"	"35.000"	"28.000"	"7.17670303095614"	"13"	"0.000523"	"0.002778"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SISKPEGTPR"	"[K].sISkPEGTPR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"510.63934"	"1529.90348"	"1529.90516"	"-1.10"	"-0.00056"	"6/98"	"6"	"98"	"7551305.39660645"	"HCD"	"MS2"	"17.46859"	"486.6"	"100.000"	"27.5046"	"5713"	"5713"	"5692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"733.1"	""	"688.3"	""	"719.7"	""	"864.7"	""	"787.9"	"809.7"	""	"744"	"5"	"35.000"	"28.000"	"11.182603845777"	"13"	"0.0008453"	"0.008046"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SISKPEGTPR"	"[K].sISkPEGTPR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"765.45575"	"1529.90422"	"1529.90516"	"-0.61"	"-0.00047"	"6/98"	"6"	"98"	"801808.897033691"	"HCD"	"MS2"	"5.508579"	"52.7"	"100.000"	"27.6231"	"5796"	"5796"	"5778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.2"	""	"70.3"	""	"73.9"	""	"87.3"	""	"97.6"	"87.9"	""	"698"	"33"	"35.000"	"28.000"	"0.0166657716506534"	""	"0.001058"	"0.01334"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPFTFHVK"	"[K].vPPFTFHVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"510.64532"	"1529.92142"	"1529.92444"	"-1.97"	"-0.00101"	"8/64"	"8"	"64"	"15420121.1464233"	"HCD"	"MS2"	"16.45348"	"309.8"	"78.534"	"47.8761"	"13978"	"13978"	"13960"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"282.7"	""	"430.1"	""	"350.7"	""	"773.1"	"0.6"	"630.9"	"471.0"	""	"596"	"25"	"34.000"	"27.000"	"0.0855492613443357"	"20"	"0.0001889"	"0.0005403"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPFTFHVK"	"[K].vPPFTFHVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"510.64557"	"1529.92215"	"1529.92444"	"-1.50"	"-0.00076"	"8/64"	"8"	"64"	"17329894.7362671"	"HCD"	"MS2"	"13.96362"	"411.4"	"89.170"	"48.1808"	"14151"	"14151"	"14130"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"393.3"	""	"569.8"	""	"503.2"	""	"1026.5"	"4.8"	"808.4"	"594.7"	""	"618"	"44"	"34.000"	"27.000"	"0.00128220799174018"	"22"	"0"	"0.0001582"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPFTFHVK"	"[K].vPPFTFHVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"510.64563"	"1529.92234"	"1529.92444"	"-1.38"	"-0.00070"	"8/64"	"8"	"64"	"19676127.6464233"	"HCD"	"MS2"	"7.133217"	"357.4"	"70.102"	"48.1717"	"14099"	"14099"	"14080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.8"	""	"495.0"	""	"408.3"	""	"971.1"	""	"700.2"	"519.1"	""	"636"	"45"	"35.000"	"28.000"	"0.00102429987562813"	"24"	"7.476E-05"	"0.0001952"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPFTFHVK"	"[K].vPPFTFHVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"510.64594"	"1529.92325"	"1529.92444"	"-0.78"	"-0.00040"	"8/64"	"8"	"64"	"9986639.91320801"	"HCD"	"MS2"	"6.692541"	"240.3"	"86.663"	"48.8005"	"14404"	"14404"	"14383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.0"	""	"354.5"	""	"255.6"	""	"604.2"	"2.0"	"465.5"	"370.7"	""	"621"	"47"	"34.000"	"27.000"	"0.00069352417518888"	"25"	"0"	"0.0001823"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPFTFHVK"	"[K].vPPFTFHVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"510.64600"	"1529.92344"	"1529.92444"	"-0.66"	"-0.00034"	"8/64"	"8"	"64"	"19393378.3673096"	"HCD"	"MS2"	"7.33367"	"390.5"	"81.220"	"48.4860"	"14275"	"14275"	"14255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"358.6"	""	"548.1"	""	"411.9"	""	"1035.5"	"2.8"	"785.9"	"561.2"	""	"621"	"44"	"34.000"	"27.000"	"0.00113256100520401"	"25"	"0"	"0.0001582"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLINPELIVSR"	"[R].fLINPELIVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QYM2"	"Poly(ADP-ribose) glycohydrolase OS=Rattus norvegicus OX=10116 GN=Parg PE=1 SV=1"	"Q9QYM2"	"Poly(ADP-ribose) glycohydrolase OS=Rattus norvegicus OX=10116 GN=Parg PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"765.46564"	"1529.92400"	"1529.92528"	"-0.84"	"-0.00064"	"7/102"	"7"	"102"	"564651.013793945"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"73.5213"	"24413"	"24413"	"24385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.8"	""	"32.6"	""	"35.1"	""	"44.9"	""	"44.7"	"48.3"	""	"621"	"7"	"34.000"	"27.000"	"5.82185794754933"	"15"	"0.0003146"	"0.001423"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPFTFHVK"	"[K].vPPFTFHVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"510.64627"	"1529.92426"	"1529.92444"	"-0.12"	"-0.00006"	"8/64"	"8"	"64"	"8421943.769104"	"HCD"	"MS2"	"10.01084"	"239.0"	"100.000"	"48.5348"	"14248"	"14248"	"14224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.7"	""	"332.7"	""	"279.8"	""	"584.8"	"0.3"	"464.8"	"392.6"	""	"621"	"44"	"34.000"	"27.000"	"0.00125043639158055"	"22"	"7.476E-05"	"0.0001841"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLINPELIVSR"	"[R].fLINPELIVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QYM2"	"Poly(ADP-ribose) glycohydrolase OS=Rattus norvegicus OX=10116 GN=Parg PE=1 SV=1"	"Q9QYM2"	"Poly(ADP-ribose) glycohydrolase OS=Rattus norvegicus OX=10116 GN=Parg PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"765.46588"	"1529.92449"	"1529.92528"	"-0.52"	"-0.00040"	"7/102"	"7"	"102"	"805955.71496582"	"HCD"	"MS2"	"15.53141"	"27.0"	"100.000"	"73.4639"	"24441"	"24441"	"24415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.1"	""	"36.8"	""	"34.3"	""	"54.1"	"0.5"	"53.5"	"43.1"	""	"618"	"16"	"34.000"	"27.000"	"0.809018549539667"	"20"	"0.0002277"	"0.001307"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDVVFLITK"	"[K].hDVVFLITk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"510.65295"	"1529.94431"	"1529.94557"	"-0.82"	"-0.00042"	"11/76"	"11"	"76"	"37634315.0253906"	"HCD"	"MS2"	"25.32358"	"421.0"	"44.227"	"47.2528"	"13723"	"13723"	"13704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"491.2"	""	"597.0"	""	"642.4"	""	"709.7"	""	"723.3"	"825.1"	""	"532"	"32"	"34.000"	"27.000"	"0.0160280849895779"	"21"	"0.0001859"	"0.0003305"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDVVFLITK"	"[K].hDVVFLITk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"510.65332"	"1529.94541"	"1529.94557"	"-0.11"	"-0.00005"	"7/76"	"7"	"76"	"30501275.0289917"	"HCD"	"MS2"	"20.89379"	"516.8"	"70.872"	"47.5120"	"13877"	"13877"	"13858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"649.1"	""	"750.4"	""	"746.2"	""	"859.1"	""	"905.4"	"994.0"	""	"521"	"34"	"34.000"	"27.000"	"0.00972316661057852"	"21"	"7.476E-05"	"0.0001997"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDVVFLITK"	"[K].hDVVFLITk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"765.47650"	"1529.94573"	"1529.94557"	"0.10"	"0.00008"	"8/76"	"8"	"76"	"1883514.23364258"	"HCD"	"MS2"	"32.60356"	"153.5"	"100.000"	"47.6065"	"13916"	"13916"	"13890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.8"	""	"213.4"	""	"207.1"	""	"277.5"	""	"264.7"	"281.7"	""	"522"	"59"	"34.000"	"27.000"	"3.24071252281619E-05"	"27"	"0"	"0.0001168"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDVVFLITK"	"[K].hDVVFLITk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.47681"	"1529.94634"	"1529.94557"	"0.50"	"0.00038"	"8/76"	"8"	"76"	"1425100.0401001"	"HCD"	"MS2"	"40.09524"	"119.3"	"100.000"	"47.3430"	"13760"	"13760"	"13736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.4"	""	"175.2"	""	"165.7"	""	"206.8"	"2.0"	"203.2"	"223.2"	""	"520"	"34"	"34.000"	"27.000"	"0.0103032288906414"	"15"	"0.0001308"	"0.0002616"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLGGNPEK"	"[K].kLGGNPEk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"510.65842"	"1529.96070"	"1529.96184"	"-0.75"	"-0.00038"	"6/70"	"6"	"70"	"2450186.23449707"	"HCD"	"MS2"	"25.76155"	"202.6"	"100.000"	"27.4080"	"5674"	"5674"	"5644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.0"	""	"289.9"	""	"296.7"	""	"320.0"	"1.6"	"357.1"	"344.3"	""	"468"	"2"	"33.000"	"26.000"	"16.3763027064532"	"13"	"0.0002277"	"0.001145"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.65982"	"1529.96491"	"1529.96670"	"-1.17"	"-0.00060"	"8/82"	"8"	"82"	"16080553.6442871"	"HCD"	"MS2"	"10.37652"	"188.5"	"44.465"	"60.1470"	"19013"	"19013"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"225.9"	""	"268.8"	""	"297.8"	""	"289.2"	""	"336.5"	"369.0"	""	"416"	"50"	"33.000"	"26.000"	"0.00020140179410234"	""	"0"	"0.0001329"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.65982"	"1529.96491"	"1529.96670"	"-1.17"	"-0.00060"	"8/82"	"8"	"82"	"16080553.6442871"	"HCD"	"MS2"	"10.37652"	"188.5"	"44.465"	"60.1470"	"19013"	"19013"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"225.9"	""	"268.8"	""	"297.8"	""	"289.2"	""	"336.5"	"369.0"	""	"416"	"50"	"33.000"	"26.000"	"0.00020140179410234"	""	"0"	"0.0001329"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"765.48615"	"1529.96501"	"1529.96670"	"-1.10"	"-0.00084"	"10/82"	"10"	"82"	"5947345.93945313"	"HCD"	"MS2"	"0"	"377.9"	"100.000"	"59.6297"	"18748"	"18748"	"18729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"538.9"	""	"586.6"	""	"549.2"	""	"591.3"	""	"649.5"	"663.8"	""	"416"	"63"	"33.000"	"26.000"	"9.31243672686833E-06"	""	"0"	"1.251E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"765.48615"	"1529.96501"	"1529.96670"	"-1.10"	"-0.00084"	"10/82"	"10"	"82"	"5947345.93945313"	"HCD"	"MS2"	"0"	"377.9"	"100.000"	"59.6297"	"18748"	"18748"	"18729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"538.9"	""	"586.6"	""	"549.2"	""	"591.3"	""	"649.5"	"663.8"	""	"416"	"63"	"33.000"	"26.000"	"9.31243672686833E-06"	""	"0"	"1.251E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"765.48633"	"1529.96538"	"1529.96670"	"-0.86"	"-0.00066"	"17/82"	"17"	"82"	"25548896.4921875"	"HCD"	"MS2"	"4.461284"	"586.3"	"39.243"	"60.0643"	"18980"	"18980"	"18964"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"728.6"	""	"860.5"	""	"912.1"	""	"907.7"	"4.2"	"1044.6"	"1096.5"	""	"416"	"71"	"33.000"	"26.000"	"1.51030039146512E-06"	""	"0"	"3.507E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"765.48633"	"1529.96538"	"1529.96670"	"-0.86"	"-0.00066"	"17/82"	"17"	"82"	"25548896.4921875"	"HCD"	"MS2"	"4.461284"	"586.3"	"39.243"	"60.0643"	"18980"	"18980"	"18964"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"728.6"	""	"860.5"	""	"912.1"	""	"907.7"	"4.2"	"1044.6"	"1096.5"	""	"416"	"71"	"33.000"	"26.000"	"1.51030039146512E-06"	""	"0"	"3.507E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.66000"	"1529.96546"	"1529.96670"	"-0.81"	"-0.00041"	"11/82"	"11"	"82"	"5167572.93487549"	"HCD"	"MS2"	"6.023973"	"150.3"	"100.000"	"58.4303"	"18317"	"18317"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.4"	""	"230.1"	""	"221.7"	""	"226.2"	""	"288.8"	"292.0"	""	"416"	"51"	"33.000"	"26.000"	"0.000157421242164363"	"26"	"0"	"0.0001112"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.66000"	"1529.96546"	"1529.96670"	"-0.81"	"-0.00041"	"11/82"	"11"	"82"	"5167572.93487549"	"HCD"	"MS2"	"6.023973"	"150.3"	"100.000"	"58.4303"	"18317"	"18317"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.4"	""	"230.1"	""	"221.7"	""	"226.2"	""	"288.8"	"292.0"	""	"416"	"51"	"33.000"	"26.000"	"0.000157421242164363"	"26"	"0"	"0.0001112"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVASAEQLLK"	"[R].lVASAEQLLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"0.7021"	"0.0000"	"1"	"1"	"1"	"510.66003"	"1529.96555"	"1529.96670"	"-0.75"	"-0.00038"	"8/82"	"8"	"82"	"4434573.58654785"	"HCD"	"MS2"	"11.17793"	"113.4"	"100.000"	"62.1941"	"19796"	"19796"	"19769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.6"	""	"163.5"	""	"161.5"	""	"183.6"	"1.1"	"197.6"	"211.4"	""	"416"	"47"	"33.000"	"26.000"	"0.000436579495793693"	""	"0"	"9.844E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVASAEQLLK"	"[R].lVASAEQLLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"765.48645"	"1529.96562"	"1529.96670"	"-0.70"	"-0.00054"	"9/82"	"9"	"82"	"3076202.33282471"	"HCD"	"MS2"	"7.173394"	"193.4"	"100.000"	"62.3146"	"19898"	"19898"	"19875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"291.1"	""	"303.2"	""	"265.1"	""	"309.8"	"2.3"	"319.4"	"339.2"	""	"413"	"69"	"33.000"	"26.000"	"2.85706457257673E-06"	""	"0"	"6.083E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"765.48651"	"1529.96575"	"1529.96670"	"-0.62"	"-0.00048"	"16/82"	"16"	"82"	"4839554.68426514"	"HCD"	"MS2"	"7.54519"	"307.7"	"100.000"	"58.4214"	"18313"	"18313"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"353.9"	""	"488.1"	""	"442.0"	""	"488.0"	"0.3"	"562.2"	"581.6"	""	"407"	"59"	"33.000"	"26.000"	"2.80262126919918E-05"	""	"0"	"2.034E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"765.48651"	"1529.96575"	"1529.96670"	"-0.62"	"-0.00048"	"16/82"	"16"	"82"	"4839554.68426514"	"HCD"	"MS2"	"7.54519"	"307.7"	"100.000"	"58.4214"	"18313"	"18313"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"353.9"	""	"488.1"	""	"442.0"	""	"488.0"	"0.3"	"562.2"	"581.6"	""	"407"	"59"	"33.000"	"26.000"	"2.80262126919918E-05"	""	"0"	"2.034E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVASAEQLLK"	"[R].lVASAEQLLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"510.66010"	"1529.96573"	"1529.96670"	"-0.63"	"-0.00032"	"8/82"	"8"	"82"	"4953017.22113037"	"HCD"	"MS2"	"9.028685"	"128.5"	"100.000"	"62.3191"	"19900"	"19900"	"19875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.2"	""	"186.2"	""	"192.8"	""	"196.3"	""	"230.7"	"224.5"	""	"407"	"50"	"33.000"	"26.000"	"0.000205382962316605"	""	"0"	"8.322E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"765.48657"	"1529.96587"	"1529.96670"	"-0.54"	"-0.00042"	"17/82"	"17"	"82"	"4571406.6060791"	"HCD"	"MS2"	"0"	"312.1"	"100.000"	"58.2912"	"18206"	"18206"	"18187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"366.2"	""	"469.1"	""	"445.4"	""	"492.7"	"2.0"	"574.3"	"609.3"	""	"407"	"74"	"33.000"	"26.000"	"8.48329195362132E-07"	""	"0"	"8.088E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"765.48657"	"1529.96587"	"1529.96670"	"-0.54"	"-0.00042"	"17/82"	"17"	"82"	"4571406.6060791"	"HCD"	"MS2"	"0"	"312.1"	"100.000"	"58.2912"	"18206"	"18206"	"18187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"366.2"	""	"469.1"	""	"445.4"	""	"492.7"	"2.0"	"574.3"	"609.3"	""	"407"	"74"	"33.000"	"26.000"	"8.48329195362132E-07"	""	"0"	"8.088E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.66025"	"1529.96619"	"1529.96670"	"-0.33"	"-0.00017"	"15/82"	"15"	"82"	"14364595.7376099"	"HCD"	"MS2"	"3.268775"	"383.8"	"100.000"	"59.8415"	"18888"	"18888"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"513.3"	""	"594.0"	""	"580.3"	""	"611.4"	""	"674.4"	"661.4"	""	"409"	"49"	"33.000"	"26.000"	"0.000248138019920088"	""	"0"	"9.178E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.66025"	"1529.96619"	"1529.96670"	"-0.33"	"-0.00017"	"15/82"	"15"	"82"	"14364595.7376099"	"HCD"	"MS2"	"3.268775"	"383.8"	"100.000"	"59.8415"	"18888"	"18888"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"513.3"	""	"594.0"	""	"580.3"	""	"611.4"	""	"674.4"	"661.4"	""	"409"	"49"	"33.000"	"26.000"	"0.000248138019920088"	""	"0"	"9.178E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.66034"	"1529.96646"	"1529.96670"	"-0.15"	"-0.00008"	"13/82"	"13"	"82"	"7395763.55480957"	"HCD"	"MS2"	"13.37208"	"213.3"	"100.000"	"59.6527"	"18758"	"18758"	"18729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.3"	""	"324.5"	""	"304.1"	""	"359.7"	""	"374.7"	"392.5"	""	"409"	"41"	"33.000"	"26.000"	"0.00155129114093468"	"23"	"0"	"0.0001046"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.66034"	"1529.96646"	"1529.96670"	"-0.15"	"-0.00008"	"13/82"	"13"	"82"	"7395763.55480957"	"HCD"	"MS2"	"13.37208"	"213.3"	"100.000"	"59.6527"	"18758"	"18758"	"18729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.3"	""	"324.5"	""	"304.1"	""	"359.7"	""	"374.7"	"392.5"	""	"409"	"41"	"33.000"	"26.000"	"0.00155129114093468"	"23"	"0"	"0.0001046"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.66040"	"1529.96665"	"1529.96670"	"-0.03"	"-0.00002"	"11/82"	"11"	"82"	"4760497.75244141"	"HCD"	"MS2"	"0"	"137.7"	"100.000"	"58.2569"	"18192"	"18192"	"18171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.0"	""	"219.3"	""	"186.2"	""	"219.7"	"0.2"	"268.5"	"259.5"	""	"409"	"53"	"33.000"	"26.000"	"9.72060537053038E-05"	"26"	"0"	"6.233E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.66040"	"1529.96665"	"1529.96670"	"-0.03"	"-0.00002"	"11/82"	"11"	"82"	"4760497.75244141"	"HCD"	"MS2"	"0"	"137.7"	"100.000"	"58.2569"	"18192"	"18192"	"18171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.0"	""	"219.3"	""	"186.2"	""	"219.7"	"0.2"	"268.5"	"259.5"	""	"409"	"53"	"33.000"	"26.000"	"9.72060537053038E-05"	"26"	"0"	"6.233E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"765.48700"	"1529.96672"	"1529.96670"	"0.01"	"0.00001"	"16/82"	"16"	"82"	"1290326.36071777"	"HCD"	"MS2"	"13.51161"	"104.4"	"100.000"	"60.4333"	"19130"	"19130"	"19107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.3"	""	"148.3"	""	"162.4"	""	"160.5"	""	"183.9"	"195.9"	""	"409"	"58"	"33.000"	"26.000"	"3.44106845488911E-05"	"26"	"0"	"3.813E-06"	"1.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"765.48700"	"1529.96672"	"1529.96670"	"0.01"	"0.00001"	"16/82"	"16"	"82"	"1290326.36071777"	"HCD"	"MS2"	"13.51161"	"104.4"	"100.000"	"60.4333"	"19130"	"19130"	"19107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.3"	""	"148.3"	""	"162.4"	""	"160.5"	""	"183.9"	"195.9"	""	"409"	"58"	"33.000"	"26.000"	"3.44106845488911E-05"	"26"	"0"	"3.813E-06"	"1.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"765.48737"	"1529.96745"	"1529.96670"	"0.49"	"0.00038"	"17/82"	"17"	"82"	"5204691.33282471"	"HCD"	"MS2"	"0"	"342.3"	"100.000"	"59.7769"	"18862"	"18862"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"482.1"	""	"535.9"	""	"515.6"	""	"564.6"	"5.9"	"561.7"	"572.0"	""	"403"	"71"	"33.000"	"26.000"	"1.5110368318049E-06"	""	"0"	"1.842E-05"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"765.48737"	"1529.96745"	"1529.96670"	"0.49"	"0.00038"	"17/82"	"17"	"82"	"5204691.33282471"	"HCD"	"MS2"	"0"	"342.3"	"100.000"	"59.7769"	"18862"	"18862"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"482.1"	""	"535.9"	""	"515.6"	""	"564.6"	"5.9"	"561.7"	"572.0"	""	"403"	"71"	"33.000"	"26.000"	"1.5110368318049E-06"	""	"0"	"1.842E-05"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.66071"	"1529.96756"	"1529.96670"	"0.56"	"0.00029"	"8/82"	"8"	"82"	"1037992.43383789"	"HCD"	"MS2"	"6.700888"	"40.4"	"100.000"	"60.5207"	"19166"	"19166"	"19139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.6"	""	"53.8"	""	"58.1"	""	"70.3"	"0.1"	"76.7"	"72.1"	""	"403"	"58"	"33.000"	"26.000"	"3.14974249992152E-05"	""	"0"	"3.103E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.66071"	"1529.96756"	"1529.96670"	"0.56"	"0.00029"	"8/82"	"8"	"82"	"1037992.43383789"	"HCD"	"MS2"	"6.700888"	"40.4"	"100.000"	"60.5207"	"19166"	"19166"	"19139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.6"	""	"53.8"	""	"58.1"	""	"70.3"	"0.1"	"76.7"	"72.1"	""	"403"	"58"	"33.000"	"26.000"	"3.14974249992152E-05"	""	"0"	"3.103E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"765.48767"	"1529.96807"	"1529.96670"	"0.89"	"0.00068"	"16/82"	"16"	"82"	"20841777.3554688"	"HCD"	"MS2"	"4.067268"	"620.2"	"47.173"	"59.9356"	"18874"	"18874"	"18857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"758.8"	""	"884.0"	""	"955.2"	""	"977.5"	"1.3"	"1120.8"	"1178.8"	""	"416"	"61"	"33.000"	"26.000"	"1.80328070157709E-05"	""	"0"	"5.089E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"765.48767"	"1529.96807"	"1529.96670"	"0.89"	"0.00068"	"16/82"	"16"	"82"	"20841777.3554688"	"HCD"	"MS2"	"4.067268"	"620.2"	"47.173"	"59.9356"	"18874"	"18874"	"18857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"758.8"	""	"884.0"	""	"955.2"	""	"977.5"	"1.3"	"1120.8"	"1178.8"	""	"416"	"61"	"33.000"	"26.000"	"1.80328070157709E-05"	""	"0"	"5.089E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVASAEQLLK"	"[R].lVASAEQLLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"765.48785"	"1529.96843"	"1529.96670"	"1.13"	"0.00087"	"9/82"	"9"	"82"	"1989259.90289307"	"HCD"	"MS2"	"24.49981"	"131.5"	"100.000"	"62.1366"	"19772"	"19772"	"19753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"202.6"	""	"181.6"	""	"195.0"	""	"214.7"	"1.3"	"220.8"	"227.6"	""	"416"	"68"	"33.000"	"26.000"	"3.05536665749924E-06"	""	"0"	"4.696E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"765.48792"	"1529.96855"	"1529.96670"	"1.21"	"0.00093"	"15/82"	"15"	"82"	"1460818.12976074"	"HCD"	"MS2"	"19.07062"	"113.4"	"100.000"	"60.2722"	"19011"	"19011"	"18985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.6"	""	"154.5"	""	"175.1"	""	"172.0"	""	"207.8"	"219.2"	""	"416"	"56"	"33.000"	"26.000"	"5.08233554960346E-05"	""	"0"	"1.675E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"765.48792"	"1529.96855"	"1529.96670"	"1.21"	"0.00093"	"15/82"	"15"	"82"	"1460818.12976074"	"HCD"	"MS2"	"19.07062"	"113.4"	"100.000"	"60.2722"	"19011"	"19011"	"18985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.6"	""	"154.5"	""	"175.1"	""	"172.0"	""	"207.8"	"219.2"	""	"416"	"56"	"33.000"	"26.000"	"5.08233554960346E-05"	""	"0"	"1.675E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIIGDSGVGK"	"[KR].lLIIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.66107"	"1529.96866"	"1529.96670"	"1.28"	"0.00065"	"11/82"	"11"	"82"	"20888688.1536865"	"HCD"	"MS2"	"7.078943"	"381.8"	"69.296"	"59.9400"	"18875"	"18875"	"18857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.5"	""	"543.8"	""	"597.5"	""	"614.8"	""	"695.3"	"705.5"	""	"416"	"51"	"33.000"	"26.000"	"0.000156337561955787"	"26"	"0"	"0.000123"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIGDSGVGK"	"[KR].lLLIGDSGVGk.[ST]"	"N-Term(TMT6plex); K11(TMT6plex)"	"7"	"7"	"Q6NYB7; P35281; P70550; P35280; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P35281; P70550; P35280; P35289; P35286; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.66107"	"1529.96866"	"1529.96670"	"1.28"	"0.00065"	"11/82"	"11"	"82"	"20888688.1536865"	"HCD"	"MS2"	"7.078943"	"381.8"	"69.296"	"59.9400"	"18875"	"18875"	"18857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.5"	""	"543.8"	""	"597.5"	""	"614.8"	""	"695.3"	"705.5"	""	"416"	"51"	"33.000"	"26.000"	"0.000156337561955787"	"26"	"0"	"0.000123"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTFSELFK"	"[K].nSTFSELFk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.4200"	"0.0000"	"1"	"1"	"1"	"765.93042"	"1530.85356"	"1530.85682"	"-2.12"	"-0.00163"	"8/88"	"8"	"88"	"2562012.34747314"	"HCD"	"MS2"	"19.83171"	"240.1"	"100.000"	"54.3274"	"16639"	"16639"	"16621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"361.7"	""	"301.0"	""	"315.4"	""	"430.9"	"8.3"	"424.7"	"432.0"	""	"955"	"50"	"36.000"	"29.000"	"0.000437495284033255"	""	"0.0001308"	"0.0002356"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTFSELFK"	"[K].nSTFSELFk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"510.95673"	"1530.85562"	"1530.85682"	"-0.78"	"-0.00040"	"7/88"	"7"	"88"	"5793828.78912354"	"HCD"	"MS2"	"48.24622"	"157.8"	"100.000"	"54.4425"	"16633"	"16633"	"16609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.1"	""	"210.8"	""	"224.9"	""	"272.2"	"2.1"	"285.8"	"255.0"	""	"944"	"21"	"36.000"	"29.000"	"0.36053048984867"	"19"	"0.0001889"	"0.001048"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTFSELFK"	"[K].nSTFSELFk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"765.93152"	"1530.85576"	"1530.85682"	"-0.69"	"-0.00053"	"8/88"	"8"	"88"	"1883250.16918945"	"HCD"	"MS2"	"0"	"186.9"	"100.000"	"54.0798"	"16485"	"16485"	"16461"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.5"	""	"211.0"	""	"264.0"	""	"319.7"	"10.3"	"333.5"	"371.7"	""	"945"	"50"	"36.000"	"29.000"	"0.000480177507381403"	""	"0"	"0.0001605"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFSLPSVVFSR"	"[K].yFSLPSVVFSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64633"	"UDP-glucuronosyltransferase 1-7 OS=Rattus norvegicus OX=10116 GN=Ugt1a7c PE=2 SV=1"	"Q64633"	"UDP-glucuronosyltransferase 1-7 OS=Rattus norvegicus OX=10116 GN=Ugt1a7c PE=2 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"765.93170"	"1530.85613"	"1530.85178"	"2.84"	"0.00217"	"13/94"	"13"	"94"	"680218.96496582"	"HCD"	"MS2"	"43.37934"	"40.1"	"100.000"	"72.8199"	"24127"	"24127"	"24097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.4"	""	"60.5"	""	"51.0"	""	"67.0"	"2.5"	"76.5"	"74.8"	""	"950"	"9"	"36.000"	"29.000"	"5.49153315041247"	"17"	"0.0006037"	"0.00502"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTFSELFK"	"[K].nSTFSELFk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"765.93176"	"1530.85625"	"1530.85682"	"-0.37"	"-0.00028"	"8/88"	"8"	"88"	"6594362.05413818"	"HCD"	"MS2"	"34.45042"	"507.5"	"100.000"	"54.3944"	"16613"	"16613"	"16593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"804.5"	""	"651.7"	""	"720.2"	""	"847.8"	"6.3"	"890.2"	"883.1"	""	"950"	"36"	"36.000"	"29.000"	"0.0111607558990295"	""	"0.0001308"	"0.0002805"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTFSELFK"	"[K].nSTFSELFk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"510.95703"	"1530.85654"	"1530.85682"	"-0.18"	"-0.00009"	"7/88"	"7"	"88"	"7555469.24761963"	"HCD"	"MS2"	"39.07802"	"218.3"	"100.000"	"54.8329"	"16846"	"16846"	"16821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"283.3"	""	"266.7"	""	"285.2"	""	"400.9"	"5.1"	"425.2"	"403.5"	""	"950"	"21"	"36.000"	"29.000"	"0.370419302498548"	"23"	"0.0003146"	"0.001446"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTFSELFK"	"[K].nSTFSELFk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"765.93219"	"1530.85710"	"1530.85682"	"0.19"	"0.00014"	"8/88"	"8"	"88"	"7666175.69451904"	"HCD"	"MS2"	"34.61877"	"574.6"	"100.000"	"54.6235"	"16760"	"16760"	"16741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"883.2"	""	"745.9"	""	"835.7"	""	"983.1"	"12.7"	"1002.2"	"975.0"	""	"943"	"36"	"36.000"	"29.000"	"0.0114151519553611"	"26"	"0.0001889"	"0.0004485"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTFSELFK"	"[K].nSTFSELFk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"510.95724"	"1530.85718"	"1530.85682"	"0.24"	"0.00012"	"7/88"	"7"	"88"	"4427397.89453125"	"HCD"	"MS2"	"54.40305"	"128.3"	"100.000"	"54.5247"	"16720"	"16720"	"16696"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.7"	""	"172.2"	""	"181.6"	""	"219.1"	"1.9"	"234.5"	"213.8"	""	"943"	"25"	"36.000"	"29.000"	"0.134735394120129"	"22"	"0.0001889"	"0.0006522"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLDPAQSASR"	"[K].kLDPAQSASR.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"510.97116"	"1530.89893"	"1530.90041"	"-0.97"	"-0.00049"	"13/102"	"13"	"102"	"2721538.4307251"	"HCD"	"MS2"	"29.37191"	"161.1"	"100.000"	"26.1396"	"5160"	"5160"	"5138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.9"	""	"206.3"	""	"205.3"	""	"237.1"	""	"314.0"	"336.0"	""	"892"	"9"	"36.000"	"29.000"	"6.142354231267"	"18"	"0.0001889"	"0.0007158"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLDPAQSASR"	"[K].kLDPAQSASR.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"510.97137"	"1530.89957"	"1530.90041"	"-0.55"	"-0.00028"	"13/102"	"13"	"102"	"3249236.51000977"	"HCD"	"MS2"	"41.69902"	"183.9"	"100.000"	"26.2139"	"5227"	"5227"	"5205"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"263.5"	""	"241.5"	""	"253.2"	""	"255.6"	""	"355.1"	"377.0"	""	"810"	"9"	"36.000"	"29.000"	"4.6073905075849"	"18"	"0.0001308"	"0.0002218"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDVNHYAK"	"[K].lIDVNHYAk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"510.97269"	"1530.90351"	"1530.90443"	"-0.61"	"-0.00031"	"8/72"	"8"	"72"	"20265423.7415771"	"HCD"	"MS2"	"18.48277"	"760.6"	"100.000"	"38.2197"	"10090"	"10090"	"10065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1118.4"	""	"1135.5"	""	"1021.1"	""	"993.9"	"9.9"	"1312.7"	"1615.4"	""	"799"	"32"	"36.000"	"29.000"	"0.0250909314345921"	"21"	"0"	"0.0001411"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDVNHYAK"	"[K].lIDVNHYAk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"510.97269"	"1530.90351"	"1530.90443"	"-0.61"	"-0.00031"	"12/72"	"12"	"72"	"23235696.5944824"	"HCD"	"MS2"	"9.163352"	"762.9"	"88.349"	"38.1382"	"10013"	"10013"	"9991"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1076.2"	""	"1103.5"	""	"1000.3"	""	"980.1"	""	"1323.1"	"1756.8"	""	"799"	"29"	"36.000"	"29.000"	"0.0505262170814725"	"21"	"0.0001859"	"0.0003495"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLSLAPVNIFK"	"[M].aSLSLAPVNIFk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"510.97397"	"1530.90735"	"1530.90930"	"-1.27"	"-0.00065"	"6/98"	"6"	"98"	"606384.75994873"	"HCD"	"MS2"	"53.75259"	"17.9"	"100.000"	"86.9414"	"29918"	"29918"	"29894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.5"	""	"20.6"	""	"23.3"	""	"34.1"	""	"30.8"	"38.4"	""	"850"	"37"	"36.000"	"29.000"	"0.00914932237257859"	"23"	"0"	"0.0001473"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLSLAPVNIFK"	"[M].aSLSLAPVNIFk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"510.97397"	"1530.90735"	"1530.90930"	"-1.27"	"-0.00065"	"6/98"	"6"	"98"	"689392.311645508"	"HCD"	"MS2"	"43.24419"	"20.5"	"100.000"	"86.9037"	"29851"	"29851"	"29825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.5"	""	"25.0"	""	"28.6"	""	"43.0"	""	"37.1"	"38.6"	""	"850"	"37"	"36.000"	"29.000"	"0.00921274244548371"	"18"	"0.0001308"	"0.0002151"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLSLAPVNIFK"	"[M].aSLSLAPVNIFk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"765.95819"	"1530.90911"	"1530.90930"	"-0.12"	"-0.00010"	"8/98"	"8"	"98"	"3527826.17791748"	"HCD"	"MS2"	"0"	"94.0"	"100.000"	"87.1241"	"29992"	"29992"	"29977"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.4"	""	"107.7"	""	"126.4"	""	"176.9"	""	"183.9"	"173.2"	""	"834"	"60"	"36.000"	"29.000"	"3.77690494574549E-05"	"19"	"0"	"0.0001498"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLSLAPVNIFK"	"[M].aSLSLAPVNIFk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.95844"	"1530.90959"	"1530.90930"	"0.19"	"0.00015"	"6/98"	"6"	"98"	"138186.611572266"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"87.3534"	"30033"	"30033"	"30013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.7"	""	"5.7"	""	"7.1"	""	"11.8"	""	"14.3"	"13.5"	""	"835"	"25"	"36.000"	"29.000"	"0.14576608171231"	"14"	"0.0006037"	"0.004339"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLSLAPVNIFK"	"[M].aSLSLAPVNIFk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"765.95880"	"1530.91033"	"1530.90930"	"0.67"	"0.00051"	"8/98"	"8"	"98"	"3392509.65759277"	"HCD"	"MS2"	"0"	"92.5"	"100.000"	"87.0653"	"29917"	"29917"	"29900"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.2"	""	"119.0"	""	"118.9"	""	"176.0"	""	"169.6"	"175.1"	""	"832"	"60"	"36.000"	"29.000"	"3.87340876194617E-05"	"19"	"0.0001308"	"0.0002369"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLSLAPVNIFK"	"[M].aSLSLAPVNIFk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.95905"	"1530.91081"	"1530.90930"	"0.99"	"0.00076"	"5/98"	"5"	"98"	"111475.638122559"	"HCD"	"MS2"	"10.09522"	"5.5"	"100.000"	"87.4395"	"30119"	"30119"	"30103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.7"	""	"6.9"	""	"8.2"	""	"5.9"	""	"11.8"	"8.4"	""	"781"	"15"	"35.000"	"28.000"	"1.24342913223405"	"13"	"0.0006037"	"0.0056"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLSLAPVNIFK"	"[M].aSLSLAPVNIFk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"765.95905"	"1530.91081"	"1530.90930"	"0.99"	"0.00076"	"8/98"	"8"	"98"	"832245.924743652"	"HCD"	"MS2"	"30.23231"	"30.8"	"100.000"	"86.7631"	"29794"	"29794"	"29777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.3"	""	"39.7"	""	"38.4"	""	"55.0"	"0.3"	"60.3"	"60.5"	""	"781"	"38"	"35.000"	"28.000"	"0.00630407016440743"	"17"	"0.0001889"	"0.0003915"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLSLAPVNIFK"	"[M].aSLSLAPVNIFk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"765.96008"	"1530.91289"	"1530.90930"	"2.35"	"0.00180"	"7/98"	"7"	"98"	"801523.168457031"	"HCD"	"MS2"	"53.38697"	"30.4"	"100.000"	"86.8214"	"29869"	"29869"	"29846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.1"	""	"40.5"	""	"38.6"	""	"58.5"	""	"61.5"	"52.1"	""	"791"	"45"	"35.000"	"28.000"	"0.00111724003007916"	"17"	"0.0001889"	"0.0005197"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIGDLQATK"	"[K].lNIGDLQATk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"510.98026"	"1530.92621"	"1530.92556"	"0.42"	"0.00022"	"11/96"	"11"	"96"	"4718972.41674805"	"HCD"	"MS2"	"36.55091"	"132.5"	"100.000"	"48.9002"	"14398"	"14398"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.6"	""	"176.5"	""	"176.9"	""	"237.7"	"3.7"	"267.6"	"235.0"	""	"708"	"25"	"35.000"	"28.000"	"0.100462333606831"	"21"	"0.0001889"	"0.0007233"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIGDLQATK"	"[K].lNIGDLQATk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"2"	"2"	"0.8116"	"0.0000"	"1"	"1"	"1"	"765.96735"	"1530.92742"	"1530.92556"	"1.21"	"0.00093"	"9/96"	"9"	"96"	"2129812.99536133"	"HCD"	"MS2"	"14.04066"	"178.5"	"100.000"	"48.8450"	"14375"	"14375"	"14351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.9"	""	"217.2"	""	"221.8"	""	"317.4"	""	"341.2"	"333.6"	""	"714"	"69"	"35.000"	"28.000"	"4.43269873810491E-06"	""	"0"	"2.153E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIGDLQATK"	"[K].lNIGDLQATk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"765.96741"	"1530.92754"	"1530.92556"	"1.29"	"0.00099"	"8/96"	"8"	"96"	"1637260.83850098"	"HCD"	"MS2"	"5.435394"	"135.9"	"100.000"	"49.2352"	"14582"	"14582"	"14558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.6"	""	"149.5"	""	"171.3"	""	"251.3"	"3.7"	"255.7"	"252.7"	""	"714"	"55"	"35.000"	"28.000"	"0.000122932925282512"	""	"0"	"4.979E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLIK"	"[R].kLNDLIk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"3"	"511.01062"	"1531.01731"	"1531.01863"	"-0.86"	"-0.00044"	"6/60"	"6"	"60"	"121101071.871094"	"HCD"	"MS2"	"17.80358"	"1523.6"	"19.424"	"38.7521"	"10265"	"10265"	"10246"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2092.5"	""	"1828.1"	""	"2167.9"	""	"2741.4"	"5.8"	"2795.0"	"2804.9"	""	"140"	"17"	"28.000"	"21.000"	"0.137435219378523"	"18"	"0.003818"	"0.09634"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKEQVVK"	"[K].lkEQVVk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"1"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"3"	"766.01233"	"1531.01738"	"1531.01863"	"-0.81"	"-0.00062"	"12/58"	"12"	"58"	"574717.336425781"	"HCD"	"MS2"	"0"	"50.3"	"100.000"	"32.4427"	"7732"	"7732"	"7702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.5"	""	"78.3"	""	"83.5"	""	"60.4"	""	"70.5"	"85.7"	""	"140"	"31"	"28.000"	"21.000"	"0.00587621990563578"	""	"0.0008125"	"0.007654"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKEQVVK"	"[K].lkEQVVk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"511.01065"	"1531.01740"	"1531.01863"	"-0.80"	"-0.00041"	"6/58"	"6"	"58"	"24199523.1102905"	"HCD"	"MS2"	"16.45193"	"1107.8"	"65.595"	"32.2580"	"7613"	"7613"	"7592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2049.8"	""	"1753.7"	""	"1728.8"	""	"1431.8"	""	"1626.9"	"1874.7"	""	"140"	"3"	"28.000"	"21.000"	"3.79400623281137"	"13"	"0.001966"	"0.02808"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLIK"	"[R].kLNDLIk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"3"	"511.01071"	"1531.01758"	"1531.01863"	"-0.68"	"-0.00035"	"6/60"	"6"	"60"	"143025061.177979"	"HCD"	"MS2"	"14.47331"	"1583.5"	"19.903"	"38.8609"	"10353"	"10353"	"10334"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2210.1"	""	"1889.8"	""	"2222.5"	""	"2817.1"	""	"2978.1"	"2913.6"	""	"140"	"17"	"28.000"	"21.000"	"0.131249615564719"	"18"	"0.003945"	"0.09997"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKEQVVK"	"[K].lkEQVVk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"511.01080"	"1531.01786"	"1531.01863"	"-0.50"	"-0.00026"	"6/58"	"6"	"58"	"26763641.1678467"	"HCD"	"MS2"	"12.16453"	"995.9"	"56.832"	"32.3810"	"7706"	"7706"	"7686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1828.3"	""	"1593.0"	""	"1495.2"	""	"1339.4"	""	"1472.6"	"1679.5"	""	"132"	"3"	"28.000"	"21.000"	"3.62696976746032"	"13"	"0.002651"	"0.03931"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLIK"	"[R].kLNDLIk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"766.01270"	"1531.01811"	"1531.01863"	"-0.33"	"-0.00026"	"12/60"	"12"	"60"	"4159729.38079834"	"HCD"	"MS2"	"0"	"349.5"	"100.000"	"38.8002"	"10285"	"10285"	"10262"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"520.6"	""	"448.7"	""	"496.8"	""	"581.3"	""	"617.6"	"652.1"	""	"132"	"28"	"28.000"	"21.000"	"0.0108029890414235"	""	"0.003635"	"0.08344"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKEQVVK"	"[K].lkEQVVk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"1"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"3"	"766.01300"	"1531.01872"	"1531.01863"	"0.06"	"0.00005"	"12/58"	"12"	"58"	"835620.092224121"	"HCD"	"MS2"	"0"	"71.6"	"100.000"	"32.2994"	"7630"	"7630"	"7608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.4"	""	"112.7"	""	"106.9"	""	"92.9"	""	"109.0"	"135.6"	""	"132"	"30"	"28.000"	"21.000"	"0.00715391763253995"	""	"0.000523"	"0.003211"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLIK"	"[R].kLNDLIk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"2"	"2"	"0.3214"	"0.0000"	"1"	"1"	"1"	"766.01300"	"1531.01872"	"1531.01863"	"0.06"	"0.00005"	"5/60"	"5"	"60"	"4134432.69250488"	"HCD"	"MS2"	"0"	"318.8"	"100.000"	"38.9046"	"10371"	"10371"	"10350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"479.6"	""	"379.7"	""	"475.9"	""	"527.6"	"1.2"	"585.3"	"569.9"	""	"132"	"28"	"28.000"	"21.000"	"0.00936577964314801"	""	"0.00955"	"0.4289"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFVGMLPEK"	"[K].hFVGmLPEk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"511.29446"	"1531.86884"	"1531.87069"	"-1.21"	"-0.00062"	"6/64"	"6"	"64"	"42578739.3217773"	"HCD"	"MS2"	"10.16889"	"337.0"	"29.164"	"35.1849"	"8844"	"8844"	"8826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"401.2"	""	"446.3"	""	"531.1"	""	"602.2"	""	"602.9"	"611.3"	""	"1011"	"38"	"37.000"	"30.000"	"0.00842793465944562"	"25"	"0.0001308"	"0.0002583"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFVGMLPEK"	"[K].hFVGmLPEk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"511.29468"	"1531.86948"	"1531.87069"	"-0.79"	"-0.00040"	"6/64"	"6"	"64"	"38047526.9078369"	"HCD"	"MS2"	"11.14366"	"404.7"	"38.775"	"35.1416"	"8783"	"8783"	"8766"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"480.9"	""	"527.6"	""	"618.6"	""	"720.6"	"2.2"	"752.6"	"732.4"	""	"1026"	"31"	"37.000"	"30.000"	"0.0364013394965218"	"23"	"0.0001308"	"0.0002761"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KNGIPFQLR"	"[K].knGIPFQLR.[T]"	"N-Term(TMT6plex); K1(TMT6plex); N2(Deamidated)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"1"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"511.31647"	"1531.93485"	"1531.93607"	"-0.80"	"-0.00041"	"7/82"	"7"	"82"	"22928487.9962158"	"HCD"	"MS2"	"22.30863"	"547.7"	"50.875"	"41.0752"	"11215"	"11215"	"11189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"851.8"	""	"711.7"	""	"766.8"	""	"855.9"	""	"960.9"	"1045.8"	""	"639"	"7"	"35.000"	"28.000"	"6.53839061433534"	"16"	"0.0001859"	"0.0003672"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KNGIPFQLR"	"[K].knGIPFQLR.[T]"	"N-Term(TMT6plex); K1(TMT6plex); N2(Deamidated)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"1"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"511.31699"	"1531.93640"	"1531.93607"	"0.22"	"0.00011"	"7/82"	"7"	"82"	"23856072.1439209"	"HCD"	"MS2"	"25.14898"	"668.3"	"59.895"	"41.2516"	"11331"	"11331"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1079.1"	""	"868.4"	""	"945.0"	""	"1076.9"	""	"1133.3"	"1225.8"	""	"623"	"8"	"34.000"	"27.000"	"4.57570535486065"	"16"	"0.0001889"	"0.0008032"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLAVSDLQK"	"[K].vTLAVSDLQk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"766.47742"	"1531.94756"	"1531.94596"	"1.04"	"0.00080"	"8/84"	"8"	"84"	"1361832.64770508"	"HCD"	"MS2"	"0"	"106.1"	"100.000"	"49.4056"	"14652"	"14652"	"14622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.9"	""	"117.0"	""	"110.5"	""	"137.6"	""	"254.6"	"257.3"	""	"536"	"36"	"34.000"	"27.000"	"0.00626808379960707"	"17"	"0"	"3.213E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLAVSDLQK"	"[K].vTLAVSDLQk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"766.47754"	"1531.94780"	"1531.94596"	"1.20"	"0.00092"	"16/84"	"16"	"84"	"1993164.05828857"	"HCD"	"MS2"	"7.575454"	"165.2"	"100.000"	"49.0452"	"14457"	"14457"	"14431"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.4"	""	"213.4"	""	"218.8"	""	"258.2"	"3.6"	"319.4"	"318.2"	""	"534"	"57"	"34.000"	"27.000"	"5.07587900739521E-05"	"24"	"0"	"2.276E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLLITEIPK"	"[K].fLLITEIPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JHX4"	"Caspase-8 OS=Rattus norvegicus OX=10116 GN=Casp8 PE=1 SV=1"	"Q9JHX4"	"Caspase-8 OS=Rattus norvegicus OX=10116 GN=Casp8 PE=1 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"766.49615"	"1531.98503"	"1531.98637"	"-0.87"	"-0.00067"	"7/66"	"7"	"66"	"299631.229187012"	"HCD"	"MS2"	"33.68462"	"27.4"	"100.000"	"75.2698"	"25178"	"25178"	"25151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.4"	""	"30.0"	""	"40.0"	""	"46.4"	"0.5"	"49.3"	"50.7"	""	"311"	"43"	"31.000"	"24.000"	"0.000720659960189927"	""	"0.0001308"	"0.0002243"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLLITEIPK"	"[K].fLLITEIPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JHX4"	"Caspase-8 OS=Rattus norvegicus OX=10116 GN=Casp8 PE=1 SV=1"	"Q9JHX4"	"Caspase-8 OS=Rattus norvegicus OX=10116 GN=Casp8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"766.49622"	"1531.98516"	"1531.98637"	"-0.80"	"-0.00061"	"4/66"	"4"	"66"	"242139.655822754"	"HCD"	"MS2"	"100"	"23.9"	"100.000"	"75.3302"	"25151"	"25151"	"25121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.3"	""	"31.0"	""	"34.6"	""	"37.8"	""	"42.4"	"52.6"	""	"311"	"6"	"31.000"	"24.000"	"4.08065983496281"	"13"	"0.003818"	"0.09481"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLIK"	"[R].kLnDLIk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); N3(Deamidated); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"511.33844"	"1532.00077"	"1532.00264"	"-1.22"	"-0.00062"	"6/60"	"6"	"60"	"27531165.3916016"	"HCD"	"MS2"	"16.35237"	"1167.0"	"67.727"	"38.6926"	"10241"	"10241"	"10214"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1562.3"	""	"1432.2"	""	"1655.3"	""	"2057.2"	""	"2239.4"	"2128.9"	""	"218"	"16"	"30.000"	"23.000"	"0.254346928788629"	"22"	"0.005385"	"0.1701"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLIK"	"[R].kLnDLIk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); N3(Deamidated); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"0.4500"	"0.0000"	"1"	"1"	"1"	"511.33887"	"1532.00205"	"1532.00264"	"-0.39"	"-0.00020"	"9/60"	"9"	"60"	"20048048.2479248"	"HCD"	"MS2"	"15.38282"	"665.6"	"51.673"	"38.7578"	"10311"	"10311"	"10286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"914.3"	""	"802.3"	""	"910.9"	""	"1144.5"	""	"1284.4"	"1255.4"	""	"216"	"20"	"30.000"	"23.000"	"0.114399402319147"	""	"0.000494"	"0.002696"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"KLNDLIK"	"[R].kLnDLIk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); N3(Deamidated); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"3"	"511.33896"	"1532.00232"	"1532.00264"	"-0.21"	"-0.00011"	"7/60"	"7"	"60"	"10942834.6452026"	"HCD"	"MS2"	"20.73055"	"598.1"	"100.000"	"40.9536"	"11165"	"11165"	"11141"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"821.3"	""	"743.7"	""	"832.5"	""	"979.7"	""	"1166.2"	"1132.6"	""	"216"	"3"	"30.000"	"23.000"	"5.52616382383533"	"13"	"0.0008731"	"0.008867"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNDLIK"	"[R].kLnDLIk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); N3(Deamidated); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"511.33908"	"1532.00269"	"1532.00264"	"0.03"	"0.00002"	"8/60"	"8"	"60"	"10267657.7434692"	"HCD"	"MS2"	"12.74047"	"611.4"	"100.000"	"41.1003"	"11269"	"11269"	"11245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"811.5"	""	"728.8"	""	"851.1"	""	"1011.8"	""	"1195.4"	"1206.4"	""	"216"	"12"	"30.000"	"23.000"	"0.676742973846123"	"18"	"0.0005564"	"0.003436"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKGGVVGIK"	"[K].skGGVVGIk.[V]"	"N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.34253"	"1532.01303"	"1532.01387"	"-0.55"	"-0.00028"	"8/78"	"8"	"78"	"10820334.7150269"	"HCD"	"MS2"	"35.37679"	"760.1"	"100.000"	"31.3466"	"7240"	"7240"	"7222"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1436.1"	""	"1268.1"	""	"1281.0"	""	"812.2"	""	"1243.9"	"1137.3"	""	"161"	"7"	"29.000"	"22.000"	"1.65880708018235"	"13"	"0.0001889"	"0.0004417"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTLEELLGEIR"	"[R].mTLEELLGEIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3Y6"	"Zinc finger CCCH-type antiviral protein 1 OS=Rattus norvegicus OX=10116 GN=Zc3hav1 PE=1 SV=1"	"Q8K3Y6"	"Zinc finger CCCH-type antiviral protein 1 OS=Rattus norvegicus OX=10116 GN=Zc3hav1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.93176"	"1532.85625"	"1532.85555"	"0.46"	"0.00035"	"6/94"	"6"	"94"	"153148.909545898"	"HCD"	"MS2"	"13.90196"	"11.5"	"100.000"	"82.9959"	"28267"	"28267"	"28240"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.2"	""	"15.7"	""	"18.9"	""	"14.8"	""	"19.8"	"22.7"	""	"1088"	"26"	"37.000"	"30.000"	"0.126940118588087"	"14"	"0.0001889"	"0.0004925"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLSAPWYLNR"	"[R].aLLSAPWYLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"766.94263"	"1532.87798"	"1532.87866"	"-0.45"	"-0.00034"	"8/82"	"8"	"82"	"1623041.43792725"	"HCD"	"MS2"	"0"	"84.7"	"100.000"	"64.2668"	"20695"	"20695"	"20675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.9"	""	"125.1"	""	"119.9"	""	"133.2"	"1.6"	"153.3"	"155.3"	""	"1043"	"43"	"37.000"	"30.000"	"0.00256598617857877"	"23"	"0"	"5.48E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLSAPWYLNR"	"[R].aLLSAPWYLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"766.94281"	"1532.87834"	"1532.87866"	"-0.21"	"-0.00016"	"7/82"	"7"	"82"	"1456363.50415039"	"HCD"	"MS2"	"0"	"87.0"	"100.000"	"64.2313"	"20628"	"20628"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.0"	""	"124.5"	""	"120.9"	""	"146.2"	""	"153.2"	"164.0"	""	"1048"	"40"	"37.000"	"30.000"	"0.00564067771942033"	"22"	"0"	"2.76E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGVFTTLQPLR"	"[K].aTGVFTTLQPLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"766.95306"	"1532.89885"	"1532.89979"	"-0.61"	"-0.00047"	"8/104"	"8"	"104"	"724166.376098633"	"HCD"	"MS2"	"33.16386"	"57.3"	"100.000"	"52.4894"	"15856"	"15856"	"15826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.9"	""	"77.2"	""	"76.8"	""	"92.6"	"1.6"	"105.3"	"114.6"	""	"874"	"51"	"36.000"	"29.000"	"0.000388580888503924"	"21"	"0"	"9.704E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGVFTTLQPLR"	"[K].aTGVFTTLQPLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"766.95349"	"1532.89971"	"1532.89979"	"-0.06"	"-0.00004"	"8/104"	"8"	"104"	"997552.073120117"	"HCD"	"MS2"	"28.49683"	"71.3"	"100.000"	"52.6461"	"15970"	"15970"	"15942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.1"	""	"104.4"	""	"106.6"	""	"114.9"	""	"124.7"	"148.8"	""	"848"	"53"	"36.000"	"29.000"	"0.00021446965668932"	"22"	"0"	"3.75E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSWIEEK"	"[K].gLLSWIEEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"3"	"3"	"0.5938"	"0.0000"	"1"	"1"	"1"	"511.64108"	"1532.90870"	"1532.90885"	"-0.10"	"-0.00005"	"8/72"	"8"	"72"	"1476562.29156494"	"HCD"	"MS2"	"52.13567"	"46.7"	"100.000"	"74.7348"	"24908"	"24908"	"24881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.3"	""	"65.7"	""	"63.2"	""	"75.5"	""	"90.8"	"82.3"	""	"763"	"32"	"35.000"	"28.000"	"0.0263326485165052"	"28"	"0.000494"	"0.002648"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSWIEEK"	"[K].gLLSWIEEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"766.95801"	"1532.90874"	"1532.90885"	"-0.07"	"-0.00006"	"8/72"	"8"	"72"	"3953197.34686279"	"HCD"	"MS2"	"50.83247"	"266.1"	"100.000"	"74.6214"	"24913"	"24913"	"24895"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"391.4"	""	"381.6"	""	"356.1"	""	"461.2"	""	"472.0"	"458.1"	""	"763"	"52"	"35.000"	"28.000"	"0.00024237875050144"	"26"	"0"	"0.000123"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSWIEEK"	"[K].gLLSWIEEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"511.64139"	"1532.90961"	"1532.90885"	"0.50"	"0.00025"	"8/72"	"8"	"72"	"1039034.42572021"	"HCD"	"MS2"	"39.64293"	"36.9"	"100.000"	"74.7622"	"24971"	"24971"	"24943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.5"	""	"49.6"	""	"49.2"	""	"66.8"	"0.2"	"67.3"	"65.3"	""	"759"	"21"	"35.000"	"28.000"	"0.271776424175796"	"20"	"0.0006037"	"0.006074"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSWIEEK"	"[K].gLLSWIEEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.7818"	"0.0000"	"1"	"1"	"1"	"766.95880"	"1532.91033"	"1532.90885"	"0.96"	"0.00074"	"16/72"	"16"	"72"	"3715206.45831299"	"HCD"	"MS2"	"46.26956"	"274.3"	"100.000"	"74.6311"	"24866"	"24866"	"24849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"412.0"	""	"382.6"	""	"379.3"	""	"478.9"	"1.2"	"478.8"	"463.4"	""	"713"	"55"	"35.000"	"28.000"	"0.000106184110709151"	"28"	"0"	"0.0001822"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAMIVNQLSK"	"[K].aAMIVNQLSk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.9104"	"0.0000"	"1"	"1"	"1"	"766.96472"	"1532.92217"	"1532.92346"	"-0.84"	"-0.00064"	"9/80"	"9"	"80"	"1852898.65142822"	"HCD"	"MS2"	"0"	"157.1"	"100.000"	"47.5696"	"13901"	"13901"	"13874"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"218.5"	""	"223.0"	""	"235.8"	""	"195.8"	"4.4"	"280.7"	"330.8"	""	"686"	"67"	"35.000"	"28.000"	"6.4016823395629E-06"	"23"	"0"	"1.896E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSVLTWLLK"	"[R].dSVLTWLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35787"	"Kinesin-like protein KIF1C OS=Rattus norvegicus OX=10116 GN=Kif1c PE=1 SV=1"	"O35787"	"Kinesin-like protein KIF1C OS=Rattus norvegicus OX=10116 GN=Kif1c PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"766.97620"	"1532.94512"	"1532.94524"	"-0.08"	"-0.00006"	"7/72"	"7"	"72"	"355784.164245605"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"83.4562"	"28455"	"28455"	"28430"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.9"	""	"34.7"	""	"41.6"	""	"50.9"	""	"58.2"	"56.3"	""	"515"	"37"	"34.000"	"27.000"	"0.00478384647186112"	"21"	"0"	"0.0001619"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITELMQVLK"	"[R].iTELMQVLk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16970"	"ATP-binding cassette sub-family D member 3 OS=Rattus norvegicus OX=10116 GN=Abcd3 PE=1 SV=3"	"P16970"	"ATP-binding cassette sub-family D member 3 OS=Rattus norvegicus OX=10116 GN=Abcd3 PE=1 SV=3"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"766.97699"	"1532.94670"	"1532.94861"	"-1.24"	"-0.00095"	"8/72"	"8"	"72"	"646698.550720215"	"HCD"	"MS2"	"11.83006"	"49.0"	"100.000"	"75.5857"	"25307"	"25307"	"25279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.4"	""	"87.3"	""	"80.9"	""	"57.9"	""	"83.3"	"91.0"	""	"468"	"48"	"33.000"	"26.000"	"0.000414205496246276"	""	"0"	"3.392E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITELMQVLK"	"[R].iTELMQVLk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16970"	"ATP-binding cassette sub-family D member 3 OS=Rattus norvegicus OX=10116 GN=Abcd3 PE=1 SV=3"	"P16970"	"ATP-binding cassette sub-family D member 3 OS=Rattus norvegicus OX=10116 GN=Abcd3 PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"766.97772"	"1532.94817"	"1532.94861"	"-0.29"	"-0.00022"	"8/72"	"8"	"72"	"613702.263305664"	"HCD"	"MS2"	"29.2318"	"49.2"	"100.000"	"75.6464"	"25280"	"25280"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.7"	"2.3"	"84.6"	""	"90.5"	""	"54.1"	"2.4"	"86.8"	"85.7"	""	"471"	"48"	"33.000"	"26.000"	"0.000405500049409204"	""	"0"	"6.103E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTMSWMK"	"[K].eYTMSWMk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"767.39636"	"1533.78545"	"1533.78458"	"0.57"	"0.00043"	"14/64"	"14"	"64"	"711742.760375977"	"HCD"	"MS2"	"36.04419"	"82.3"	"100.000"	"51.2743"	"15359"	"15359"	"15330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.2"	""	"136.2"	""	"120.6"	""	"95.9"	"2.4"	"154.2"	"148.0"	""	"763"	"42"	"35.000"	"28.000"	"0.00246884907908084"	"20"	"0"	"0.0001087"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGDLGVDLTSK"	"[K].aGDLGVDLTSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"767.44702"	"1533.88677"	"1533.88884"	"-1.35"	"-0.00104"	"17/94"	"17"	"94"	"811789.317260742"	"HCD"	"MS2"	"0"	"79.4"	"100.000"	"45.8013"	"13180"	"13180"	"13160"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.1"	""	"111.2"	""	"124.4"	""	"120.0"	"0.9"	"123.0"	"134.9"	""	"846"	"56"	"36.000"	"29.000"	"9.69037017120769E-05"	"24"	"0"	"2.359E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGDLGVDLTSK"	"[K].aGDLGVDLTSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"511.96774"	"1533.88868"	"1533.88884"	"-0.11"	"-0.00006"	"12/94"	"12"	"94"	"1528395.18243408"	"HCD"	"MS2"	"31.84237"	"74.9"	"100.000"	"45.7738"	"13169"	"13169"	"13154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.2"	""	"107.4"	""	"108.8"	""	"129.1"	"1.0"	"126.5"	"129.8"	""	"867"	"31"	"36.000"	"29.000"	"0.0381934686448974"	"20"	"0.0001889"	"0.0003815"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLIGTIFHK"	"[K].mLIGTIFHk.[A]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"511.97910"	"1533.92273"	"1533.92273"	"0.00"	"0.00000"	"12/64"	"12"	"64"	"4068529.26507568"	"HCD"	"MS2"	"24.46492"	"111.4"	"100.000"	"48.0342"	"14091"	"14091"	"14066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.5"	""	"129.7"	""	"151.6"	""	"264.4"	"3.3"	"197.0"	"207.0"	""	"670"	"21"	"35.000"	"28.000"	"0.274185704025154"	"17"	"0.0001889"	"0.0004251"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEALNLFK"	"[R].lQEALNLFk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"767.47229"	"1533.93730"	"1533.94049"	"-2.07"	"-0.00159"	"16/78"	"16"	"78"	"1407054.35693359"	"HCD"	"MS2"	"0"	"116.9"	"100.000"	"71.3701"	"23586"	"23586"	"23562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.9"	""	"135.1"	""	"150.0"	""	"215.0"	""	"234.0"	"248.9"	""	"593"	"57"	"34.000"	"27.000"	"5.45788898435545E-05"	""	"0"	"9.651E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEALNLFK"	"[R].lQEALNLFk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"767.47296"	"1533.93865"	"1533.94049"	"-1.20"	"-0.00092"	"12/78"	"12"	"78"	"316556.500854492"	"HCD"	"MS2"	"0"	"30.5"	"100.000"	"71.6811"	"23713"	"23713"	"23690"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.0"	""	"39.4"	""	"36.3"	""	"48.5"	"0.1"	"54.2"	"70.2"	""	"572"	"38"	"34.000"	"27.000"	"0.00487939563254893"	"20"	"7.476E-05"	"0.0001878"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNNLVLFDK"	"[K].lNNLVLFDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"511.98447"	"1533.93885"	"1533.94049"	"-1.07"	"-0.00055"	"11/78"	"11"	"78"	"3130645.16339111"	"HCD"	"MS2"	"23.89923"	"89.5"	"100.000"	"65.6198"	"21248"	"21248"	"21219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.7"	""	"135.7"	""	"161.1"	""	"150.1"	"2.0"	"158.6"	"120.1"	""	"572"	"38"	"34.000"	"27.000"	"0.00448090806050931"	"20"	"0.0001308"	"0.0002817"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNNLVLFDK"	"[K].lNNLVLFDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"767.47339"	"1533.93950"	"1533.94049"	"-0.64"	"-0.00049"	"8/78"	"8"	"78"	"4909122.31414795"	"HCD"	"MS2"	"56.57925"	"283.6"	"100.000"	"65.5321"	"21212"	"21212"	"21187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"426.4"	""	"470.9"	""	"503.4"	""	"484.2"	"1.4"	"426.8"	"363.0"	""	"571"	"50"	"34.000"	"27.000"	"0.000311606216056121"	"23"	"0.0001308"	"0.0002439"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEALNLFK"	"[R].lQEALNLFk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"767.47345"	"1533.93962"	"1533.94049"	"-0.56"	"-0.00043"	"16/78"	"16"	"78"	"1383678.02972412"	"HCD"	"MS2"	"0"	"111.0"	"100.000"	"71.4477"	"23566"	"23566"	"23539"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.3"	""	"134.0"	""	"131.9"	""	"208.7"	"0.7"	"222.8"	"230.2"	""	"565"	"55"	"34.000"	"27.000"	"8.29886026679133E-05"	"27"	"0"	"9.615E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNNLVLFDK"	"[K].lNNLVLFDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"511.98499"	"1533.94040"	"1533.94049"	"-0.05"	"-0.00003"	"11/78"	"11"	"78"	"2734422.43322754"	"HCD"	"MS2"	"34.31778"	"82.4"	"100.000"	"65.6877"	"21223"	"21223"	"21193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.3"	""	"132.9"	""	"155.8"	""	"145.8"	""	"127.5"	"103.8"	""	"559"	"42"	"34.000"	"27.000"	"0.00181711248450894"	"22"	"0.0001308"	"0.0002075"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNNLVLFDK"	"[K].lNNLVLFDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"767.47418"	"1533.94109"	"1533.94049"	"0.39"	"0.00030"	"8/78"	"8"	"78"	"4734303.75183105"	"HCD"	"MS2"	"46.71339"	"302.8"	"100.000"	"65.5955"	"21185"	"21185"	"21161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.5"	""	"505.3"	""	"532.1"	""	"527.6"	"1.9"	"466.5"	"386.6"	""	"553"	"51"	"34.000"	"27.000"	"0.000198927642418023"	"24"	"0.0001308"	"0.0002261"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFVDEVLK"	"[R].iIFVDEVLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7TPK1"	"E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus OX=10116 GN=Uhrf1 PE=1 SV=2"	"Q7TPK1"	"E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus OX=10116 GN=Uhrf1 PE=1 SV=2"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"9"	"511.99298"	"1533.96439"	"1533.96564"	"-0.81"	"-0.00042"	"6/66"	"6"	"66"	"1521932.331604"	"HCD"	"MS2"	"8.72347"	"47.9"	"100.000"	"67.8507"	"22098"	"22098"	"22074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.8"	""	"67.6"	""	"70.5"	""	"78.5"	"1.7"	"89.9"	"89.5"	""	"483"	"4"	"33.000"	"26.000"	"9.61428816886695"	"16"	"0.004726"	"0.1374"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKEEISK"	"[K].lkEEISk.[M]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"1"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"767.49451"	"1533.98174"	"1533.98191"	"-0.11"	"-0.00008"	"10/64"	"10"	"64"	"230634.464050293"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"34.1618"	"8426"	"8426"	"8408"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.9"	""	"25.1"	""	"32.6"	""	"34.9"	""	"36.8"	"39.4"	""	"356"	"20"	"32.000"	"25.000"	"0.19205251655691"	"24"	"0.002099"	"0.03184"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPYPTK"	"[R].kIPYPTk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"512.00385"	"1533.99698"	"1533.99716"	"-0.12"	"-0.00006"	"5/60"	"5"	"60"	"6544864.85510254"	"HCD"	"MS2"	"31.80078"	"387.1"	"100.000"	"34.8203"	"8695"	"8695"	"8666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"470.3"	""	"500.4"	""	"501.0"	""	"687.1"	""	"718.2"	"795.0"	""	"254"	"12"	"31.000"	"24.000"	"0.844896908376212"	"13"	"0.0007076"	"0.006882"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLVGLEPTK"	"[K].yGLVGLEPTk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4FZT8"	"SPRY domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Spryd4 PE=2 SV=1"	"Q4FZT8"	"SPRY domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Spryd4 PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"767.95471"	"1534.90215"	"1534.92450"	"-14.56"	"-0.01118"	"6/76"	"6"	"76"	"1250431.4574585"	"HCD"	"MS2"	"0"	"112.8"	"100.000"	"49.6849"	"14762"	"14762"	"14734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.6"	""	"179.2"	""	"145.2"	""	"155.9"	"4.2"	"195.3"	"189.2"	""	"773"	"13"	"35.000"	"28.000"	"1.84140576400293"	"16"	"0.0003839"	"0.001934"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDAFVEGVVK"	"[K].lDAFVEGVVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"767.96387"	"1534.92046"	"1534.92450"	"-2.63"	"-0.00202"	"9/80"	"9"	"80"	"1409795.43011475"	"HCD"	"MS2"	"100"	"90.8"	"100.000"	"67.1470"	"21866"	"21866"	"21852"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.1"	""	"130.6"	""	"130.4"	""	"152.8"	""	"169.2"	"168.5"	""	"662"	"40"	"35.000"	"28.000"	"0.00355490495484953"	"24"	"0"	"3.434E-05"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNNLVLFDK"	"[K].lnNLVLFDk.[A]"	"N-Term(TMT6plex); N2(Deamidated); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"767.96490"	"1534.92253"	"1534.92450"	"-1.28"	"-0.00098"	"13/78"	"13"	"78"	"357874.882751465"	"HCD"	"MS2"	"36.63552"	"34.6"	"100.000"	"69.9335"	"23000"	"23000"	"22970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.5"	""	"52.9"	""	"56.7"	""	"54.1"	"0.1"	"59.9"	"55.0"	""	"637"	"42"	"35.000"	"28.000"	"0.00197291982411955"	"20"	"0"	"0.0001488"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LNNLVLFDK"	"[K].lnNLVLFDk.[A]"	"N-Term(TMT6plex); N2(Deamidated); K9(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"767.96570"	"1534.92412"	"1534.92450"	"-0.25"	"-0.00019"	"7/78"	"7"	"78"	"835342.21862793"	"HCD"	"MS2"	"10.01594"	"78.1"	"100.000"	"68.6652"	"22430"	"22430"	"22410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.6"	""	"98.5"	""	"101.7"	""	"142.4"	""	"153.5"	"154.1"	""	"629"	"14"	"34.000"	"27.000"	"1.27239117938846"	"20"	"0.0001889"	"0.0007805"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLPEYGGTK"	"[K].vLLPEYGGTk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"767.96576"	"1534.92424"	"1534.92450"	"-0.17"	"-0.00013"	"9/80"	"9"	"80"	"4146821.60870361"	"HCD"	"MS2"	"0"	"262.5"	"100.000"	"47.5729"	"13854"	"13854"	"13832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.2"	""	"345.6"	""	"358.0"	""	"414.9"	""	"447.5"	"534.6"	""	"629"	"45"	"34.000"	"27.000"	"0.00100373865542919"	""	"0"	"8.151E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLPEYGGTK"	"[K].vLLPEYGGTk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"767.96649"	"1534.92571"	"1534.92450"	"0.79"	"0.00060"	"9/80"	"9"	"80"	"5028340.62420654"	"HCD"	"MS2"	"8.74687"	"318.7"	"100.000"	"47.8824"	"14029"	"14029"	"14002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"457.6"	""	"390.0"	""	"448.1"	""	"523.4"	""	"573.8"	"628.8"	""	"628"	"45"	"34.000"	"27.000"	"0.00107381544949305"	""	"0"	"0.0001008"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLHQVLQELR"	"[R].lGLHQVLQELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"512.31378"	"1534.92679"	"1534.92668"	"0.07"	"0.00004"	"12/92"	"12"	"92"	"5113809.8392334"	"HCD"	"MS2"	"18.2818"	"115.9"	"100.000"	"49.6138"	"14686"	"14686"	"14655"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.1"	""	"169.5"	""	"154.7"	""	"193.4"	"3.1"	"209.5"	"217.3"	""	"607"	"20"	"34.000"	"27.000"	"0.317803514333448"	"25"	"0.0001308"	"0.0002737"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVNLGVGAYR"	"[R].kVNLGVGAYR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"512.32031"	"1534.94638"	"1534.94697"	"-0.38"	"-0.00019"	"8/92"	"8"	"92"	"9210596.70922852"	"HCD"	"MS2"	"12.82498"	"517.6"	"100.000"	"34.5678"	"8591"	"8591"	"8570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"888.7"	""	"775.8"	""	"812.9"	""	"657.0"	"0.5"	"822.0"	"936.3"	""	"428"	"14"	"33.000"	"26.000"	"0.808004488580391"	"13"	"0.0001308"	"0.00022"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVNLGVGAYR"	"[R].kVNLGVGAYR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"512.32068"	"1534.94748"	"1534.94697"	"0.34"	"0.00017"	"8/92"	"8"	"92"	"13465624.3528442"	"HCD"	"MS2"	"38.06044"	"674.3"	"100.000"	"34.4327"	"8493"	"8493"	"8467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1149.9"	""	"1051.7"	""	"1154.8"	""	"809.3"	""	"1019.1"	"1193.5"	""	"467"	"16"	"33.000"	"26.000"	"0.608536853924742"	"13"	"0.0001889"	"0.0005557"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVTVLELFK"	"[K].qVTVLELFk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q07647"	"Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus OX=10116 GN=Slc2a3 PE=1 SV=1"	"Q07647"	"Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus OX=10116 GN=Slc2a3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.98309"	"1534.95891"	"1534.96089"	"-1.29"	"-0.00099"	"11/86"	"11"	"86"	"398051.216369629"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"70.7156"	"23319"	"23319"	"23290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.0"	""	"38.5"	""	"39.6"	""	"51.8"	"0.3"	"61.3"	"63.5"	""	"416"	"8"	"33.000"	"26.000"	"3.23640851373855"	"13"	"0.0003571"	"0.001492"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTNLLILFK"	"[K].dTNLLILFk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"767.98383"	"1534.96037"	"1534.96089"	"-0.33"	"-0.00026"	"7/78"	"7"	"78"	"712692.968200684"	"HCD"	"MS2"	"37.54895"	"59.9"	"100.000"	"75.9413"	"25452"	"25452"	"25423"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.2"	""	"61.9"	""	"70.0"	""	"112.7"	""	"139.7"	"130.2"	""	"414"	"30"	"33.000"	"26.000"	"0.0200433516246078"	"16"	"0.0001889"	"0.0008843"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVTVLELFK"	"[K].qVTVLELFk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q07647"	"Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus OX=10116 GN=Slc2a3 PE=1 SV=1"	"Q07647"	"Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus OX=10116 GN=Slc2a3 PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"767.98425"	"1534.96123"	"1534.96089"	"0.22"	"0.00017"	"7/86"	"7"	"86"	"361883.205383301"	"HCD"	"MS2"	"20.71206"	"35.6"	"100.000"	"70.7447"	"23279"	"23279"	"23251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.2"	""	"41.2"	""	"41.8"	""	"59.9"	""	"82.2"	"77.1"	""	"414"	"37"	"33.000"	"26.000"	"0.00399917441622503"	"17"	"7.476E-05"	"0.0002036"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTNLLILFK"	"[K].dTNLLILFk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"767.98444"	"1534.96160"	"1534.96089"	"0.46"	"0.00035"	"8/78"	"8"	"78"	"756337.416809082"	"HCD"	"MS2"	"11.90192"	"59.6"	"100.000"	"75.9883"	"25419"	"25419"	"25393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.0"	""	"60.1"	""	"67.9"	""	"114.0"	""	"116.9"	"140.1"	""	"404"	"50"	"33.000"	"26.000"	"0.000221999179565369"	"20"	"0.0001308"	"0.0002963"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMVQLIDVAR"	"[R].fDMVQLIDVAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P14056"	"Serine/threonine-protein kinase A-Raf OS=Rattus norvegicus OX=10116 GN=Araf PE=1 SV=1"	"P14056"	"Serine/threonine-protein kinase A-Raf OS=Rattus norvegicus OX=10116 GN=Araf PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"768.42609"	"1535.84490"	"1535.84532"	"-0.27"	"-0.00021"	"5/104"	"5"	"104"	"385816.725830078"	"HCD"	"MS2"	"45.34749"	"33.1"	"100.000"	"75.8335"	"25356"	"25356"	"25329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.8"	""	"42.6"	""	"44.1"	""	"48.0"	""	"65.6"	"70.8"	""	"975"	"22"	"36.000"	"29.000"	"0.328832413502737"	"21"	"0.0003146"	"0.001447"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDIK"	"[R].imQWQDIk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"768.43536"	"1535.86345"	"1535.86561"	"-1.40"	"-0.00108"	"7/66"	"7"	"66"	"609420.84185791"	"HCD"	"MS2"	"0"	"61.4"	"100.000"	"44.9035"	"12767"	"12767"	"12736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.7"	""	"83.7"	""	"85.1"	""	"120.4"	""	"95.2"	"113.9"	""	"856"	"21"	"36.000"	"29.000"	"0.376221637203619"	"19"	"0.001217"	"0.01747"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDIK"	"[R].imQWQDIk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"768.43573"	"1535.86418"	"1535.86561"	"-0.93"	"-0.00071"	"11/66"	"11"	"66"	"4879254.96246338"	"HCD"	"MS2"	"3.303273"	"353.0"	"100.000"	"45.2325"	"12901"	"12901"	"12880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"463.1"	""	"380.6"	""	"344.0"	""	"1125.7"	""	"530.2"	"494.8"	""	"876"	"28"	"36.000"	"29.000"	"0.0761156762992226"	"25"	"0.0003839"	"0.001793"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMGPNYTPGK"	"[R].iMGPNYTPGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"512.62628"	"1535.86429"	"1535.86561"	"-0.86"	"-0.00044"	"8/82"	"8"	"82"	"22824458.5892334"	"HCD"	"MS2"	"46.5316"	"303.6"	"34.929"	"39.5627"	"10641"	"10641"	"10622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"470.4"	""	"429.0"	""	"463.3"	""	"380.8"	""	"557.5"	"577.2"	""	"875"	"25"	"36.000"	"29.000"	"0.138988240590927"	"16"	"0.0002277"	"0.001245"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMGPNYTPGK"	"[R].iMGPNYTPGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"512.62646"	"1535.86484"	"1535.86561"	"-0.50"	"-0.00025"	"8/82"	"8"	"82"	"14979748.9667969"	"HCD"	"MS2"	"47.10427"	"263.0"	"37.772"	"39.4950"	"10570"	"10570"	"10550"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"411.1"	""	"365.3"	""	"437.2"	""	"328.2"	""	"479.1"	"473.8"	""	"862"	"19"	"36.000"	"29.000"	"0.536385797673466"	"14"	"0.0001889"	"0.0008213"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMQWQDIK"	"[R].imQWQDIk.[T]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"768.43610"	"1535.86492"	"1535.86561"	"-0.45"	"-0.00035"	"11/66"	"11"	"66"	"5530981.44378662"	"HCD"	"MS2"	"0"	"390.4"	"100.000"	"45.4231"	"13028"	"13028"	"13003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"544.8"	""	"460.6"	""	"399.3"	""	"1138.9"	""	"575.4"	"572.1"	""	"862"	"28"	"36.000"	"29.000"	"0.0738715599536131"	"25"	"0.0003839"	"0.001868"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMGPNYTPGK"	"[R].iMGPNYTPGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"768.43628"	"1535.86528"	"1535.86561"	"-0.21"	"-0.00016"	"8/82"	"8"	"82"	"8480308.06921387"	"HCD"	"MS2"	"0"	"566.1"	"100.000"	"39.4505"	"10595"	"10595"	"10574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"872.5"	""	"818.1"	""	"874.4"	""	"639.8"	""	"1063.2"	"1105.5"	""	"862"	"39"	"36.000"	"29.000"	"0.00596317109336836"	"16"	"0.0001889"	"0.0004539"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMGPNYTPGK"	"[R].iMGPNYTPGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.9815"	"0.0000"	"1"	"1"	"1"	"768.43677"	"1535.86626"	"1535.86561"	"0.42"	"0.00033"	"9/82"	"9"	"82"	"8912606.64886475"	"HCD"	"MS2"	"0"	"582.4"	"100.000"	"39.3457"	"10509"	"10509"	"10486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"981.7"	""	"863.6"	""	"870.5"	""	"611.1"	"6.6"	"1060.8"	"1120.3"	""	"859"	"54"	"36.000"	"29.000"	"0.000162915786046196"	"17"	"0.0001308"	"0.0002165"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVHGDIFRPPR"	"[K].lVHGDIFRPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HG5"	"Transmembrane 9 superfamily member 2 OS=Rattus norvegicus OX=10116 GN=Tm9sf2 PE=2 SV=1"	"Q66HG5"	"Transmembrane 9 superfamily member 2 OS=Rattus norvegicus OX=10116 GN=Tm9sf2 PE=2 SV=1"	"0"	"4"	"4"	"0.2857"	"0.0000"	"1"	"1"	"1"	"384.73038"	"1535.89968"	"1535.90080"	"-0.73"	"-0.00028"	"5/86"	"5"	"86"	"6176030.86218262"	"HCD"	"MS2"	"25.7351"	"125.2"	"100.000"	"34.6919"	"8599"	"8599"	"8574"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.6"	""	"154.4"	""	"203.5"	""	"198.3"	"2.2"	"234.8"	"234.7"	""	"682"	"7"	"35.000"	"28.000"	"7.29045072520261"	"18"	"0.0001889"	"0.0004723"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVHGDIFRPPR"	"[K].lVHGDIFRPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HG5"	"Transmembrane 9 superfamily member 2 OS=Rattus norvegicus OX=10116 GN=Tm9sf2 PE=2 SV=1"	"Q66HG5"	"Transmembrane 9 superfamily member 2 OS=Rattus norvegicus OX=10116 GN=Tm9sf2 PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"384.73074"	"1535.90114"	"1535.90080"	"0.23"	"0.00009"	"6/86"	"6"	"86"	"5956909.21020508"	"HCD"	"MS2"	"20.62351"	"122.0"	"100.000"	"34.7812"	"8679"	"8679"	"8650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.1"	""	"158.6"	""	"183.8"	""	"196.9"	"1.5"	"216.9"	"235.8"	""	"714"	"10"	"35.000"	"28.000"	"3.24839038329714"	"13"	"0.0001308"	"0.0002986"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQVSMASLK"	"[K].iTQVSMASLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"768.45514"	"1535.90300"	"1535.92312"	"-13.10"	"-0.01006"	"9/98"	"9"	"98"	"2066303.7701416"	"HCD"	"MS2"	"22.0431"	"182.5"	"100.000"	"48.5463"	"14253"	"14253"	"14224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.6"	""	"262.7"	""	"250.4"	""	"255.5"	"3.2"	"356.8"	"339.6"	""	"713"	"29"	"35.000"	"28.000"	"0.041501092948484"	"23"	"0.0001308"	"0.0003048"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQVSMASLK"	"[K].iTQVSMASLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"O54921"	"Exocyst complex component 2 OS=Rattus norvegicus OX=10116 GN=Exoc2 PE=1 SV=1"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"768.45660"	"1535.90593"	"1535.92312"	"-11.19"	"-0.00859"	"13/98"	"13"	"98"	"2174338.77801514"	"HCD"	"MS2"	"100"	"194.4"	"100.000"	"48.8233"	"14414"	"14414"	"14383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.7"	""	"266.4"	""	"285.7"	""	"260.0"	""	"384.0"	"368.8"	""	"706"	"18"	"35.000"	"28.000"	"0.621977544383305"	"27"	"0.0001889"	"0.0005579"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDELVVDK"	"[K].lFDELVVDk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"768.45673"	"1535.90618"	"1535.90852"	"-1.52"	"-0.00117"	"16/74"	"16"	"74"	"3944439.83294678"	"HCD"	"MS2"	"5.471529"	"288.3"	"100.000"	"66.5403"	"21623"	"21623"	"21603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"324.2"	"3.0"	"301.0"	""	"317.4"	""	"703.5"	""	"545.5"	"542.1"	""	"698"	"56"	"35.000"	"28.000"	"9.28593045869784E-05"	""	"0"	"0.0001495"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDELVVDK"	"[K].lFDELVVDk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"512.64044"	"1535.90677"	"1535.90852"	"-1.14"	"-0.00058"	"9/74"	"9"	"74"	"3349160.62426758"	"HCD"	"MS2"	"12.57267"	"92.2"	"100.000"	"66.6323"	"21661"	"21661"	"21635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.6"	""	"104.7"	""	"103.7"	""	"216.9"	""	"171.1"	"183.8"	""	"698"	"27"	"35.000"	"28.000"	"0.0671159013389645"	"23"	"0.0004166"	"0.002501"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDELVVDK"	"[K].lFDELVVDk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"512.64087"	"1535.90805"	"1535.90852"	"-0.30"	"-0.00015"	"9/74"	"9"	"74"	"3084310.40264893"	"HCD"	"MS2"	"23.6953"	"90.5"	"100.000"	"66.6675"	"21623"	"21623"	"21593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.9"	""	"110.8"	""	"97.7"	""	"203.1"	""	"168.4"	"186.9"	""	"694"	"26"	"35.000"	"28.000"	"0.0902255368418349"	"23"	"0.0001889"	"0.0006574"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDELVVDK"	"[K].lFDELVVDk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"768.45831"	"1535.90935"	"1535.90852"	"0.54"	"0.00042"	"16/74"	"16"	"74"	"3416874.75219727"	"HCD"	"MS2"	"2.99922"	"263.0"	"100.000"	"66.6056"	"21597"	"21597"	"21577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.5"	""	"296.9"	""	"283.0"	""	"646.4"	""	"505.0"	"493.4"	""	"681"	"56"	"35.000"	"28.000"	"9.10158682149858E-05"	""	"0"	"0.0001537"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FILNLPTFSVR"	"[R].fILNLPTFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"768.45941"	"1535.91155"	"1535.91472"	"-2.06"	"-0.00158"	"9/98"	"9"	"98"	"978368.670288086"	"HCD"	"MS2"	"0"	"50.6"	"100.000"	"80.3716"	"27197"	"27197"	"27169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.8"	""	"77.7"	""	"74.2"	""	"87.0"	"2.3"	"82.7"	"96.2"	""	"652"	"38"	"35.000"	"28.000"	"0.00570450020491638"	"20"	"0.0001889"	"0.0007739"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FILNLPTFSVR"	"[R].fILNLPTFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"512.64233"	"1535.91245"	"1535.91472"	"-1.48"	"-0.00076"	"10/98"	"10"	"98"	"777717.018005371"	"HCD"	"MS2"	"27.45575"	"13.4"	"100.000"	"80.4454"	"27227"	"27227"	"27201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.6"	""	"13.6"	""	"22.8"	""	"27.4"	""	"23.8"	"25.7"	""	"637"	"45"	"35.000"	"28.000"	"0.000966294342165874"	"22"	"0"	"0.000157"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FILNLPTFSVR"	"[R].fILNLPTFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"512.64264"	"1535.91336"	"1535.91472"	"-0.88"	"-0.00045"	"11/98"	"11"	"98"	"778669.732971191"	"HCD"	"MS2"	"12.48472"	"12.9"	"100.000"	"80.4264"	"27270"	"27270"	"27247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.0"	""	"14.1"	""	"16.7"	""	"23.9"	""	"24.8"	"26.5"	""	"651"	"41"	"35.000"	"28.000"	"0.00265186244448783"	"23"	"0.0001859"	"0.0003483"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FILNLPTFSVR"	"[R].fILNLPTFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"768.46063"	"1535.91399"	"1535.91472"	"-0.47"	"-0.00036"	"10/98"	"10"	"98"	"1462551.34637451"	"HCD"	"MS2"	"3.101131"	"64.6"	"100.000"	"80.3755"	"27249"	"27249"	"27231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.4"	""	"84.7"	""	"102.5"	""	"117.4"	""	"106.1"	"120.6"	""	"653"	"51"	"35.000"	"28.000"	"0.000264778785389279"	"20"	"0"	"0.0001484"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FILNLPTFSVR"	"[R].fILNLPTFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"768.46082"	"1535.91435"	"1535.91472"	"-0.24"	"-0.00018"	"10/98"	"10"	"98"	"833125.00189209"	"HCD"	"MS2"	"1.400817"	"44.1"	"100.000"	"80.6893"	"27377"	"27377"	"27358"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.5"	""	"60.8"	""	"73.6"	""	"71.2"	""	"64.6"	"97.1"	""	"639"	"53"	"35.000"	"28.000"	"0.000172771006181113"	"22"	"0"	"0.0001164"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FILNLPTFSVR"	"[R].fILNLPTFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"768.46082"	"1535.91435"	"1535.91472"	"-0.24"	"-0.00018"	"10/98"	"10"	"98"	"1413274.7600708"	"HCD"	"MS2"	"0"	"72.5"	"100.000"	"80.6555"	"27313"	"27313"	"27296"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.0"	""	"99.2"	""	"116.7"	""	"113.2"	"0.0"	"135.6"	"129.1"	""	"639"	"46"	"35.000"	"28.000"	"0.000804397778418954"	"21"	"0"	"0.000169"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLESFQVK"	"[K].qVLESFQVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"512.64386"	"1535.91703"	"1535.91975"	"-1.77"	"-0.00091"	"6/82"	"6"	"82"	"7091084.65362549"	"HCD"	"MS2"	"6.942336"	"206.5"	"100.000"	"48.4650"	"14267"	"14267"	"14239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.0"	""	"252.3"	""	"246.4"	""	"341.8"	""	"461.0"	"470.1"	""	"638"	"32"	"35.000"	"28.000"	"0.0194890505944878"	"18"	"0.0001859"	"0.0003361"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLESFQVK"	"[K].qVLESFQVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"512.64429"	"1535.91831"	"1535.91975"	"-0.94"	"-0.00048"	"7/82"	"7"	"82"	"4458903.49865723"	"HCD"	"MS2"	"10.06043"	"143.1"	"100.000"	"48.1121"	"14075"	"14075"	"14050"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.4"	""	"185.0"	""	"174.0"	""	"224.7"	""	"314.0"	"315.9"	""	"616"	"35"	"34.000"	"27.000"	"0.00945258772424476"	"24"	"0"	"0.0001742"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLESFQVK"	"[K].qVLESFQVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"768.46344"	"1535.91960"	"1535.91975"	"-0.10"	"-0.00007"	"16/82"	"16"	"82"	"3472262.99658203"	"HCD"	"MS2"	"0"	"289.1"	"100.000"	"48.4191"	"14248"	"14248"	"14226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.0"	""	"398.4"	""	"336.6"	""	"480.6"	""	"618.4"	"605.2"	""	"592"	"57"	"34.000"	"27.000"	"6.12761839242148E-05"	"25"	"0"	"0.0001491"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLESFQVK"	"[K].qVLESFQVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"768.46368"	"1535.92009"	"1535.91975"	"0.22"	"0.00017"	"13/82"	"13"	"82"	"1503012.13305664"	"HCD"	"MS2"	"100"	"146.7"	"100.000"	"48.0754"	"14060"	"14060"	"14037"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.2"	""	"189.0"	""	"169.6"	""	"236.2"	""	"324.5"	"317.1"	""	"590"	"39"	"34.000"	"27.000"	"0.00406276793323714"	"16"	"0"	"0.0001445"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLESFQVK"	"[K].qVLESFQVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"512.64490"	"1535.92014"	"1535.91975"	"0.25"	"0.00013"	"7/82"	"7"	"82"	"3798351.03973389"	"HCD"	"MS2"	"7.398169"	"123.9"	"100.000"	"48.4201"	"14201"	"14201"	"14176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.4"	""	"161.7"	""	"158.1"	""	"181.2"	"1.8"	"279.9"	"254.5"	""	"590"	"42"	"34.000"	"27.000"	"0.00187854678667835"	"15"	"0.0001889"	"0.0004882"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLESFQVK"	"[K].qVLESFQVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"768.46429"	"1535.92131"	"1535.91975"	"1.02"	"0.00078"	"8/82"	"8"	"82"	"3123774.58258057"	"HCD"	"MS2"	"6.699054"	"258.3"	"100.000"	"48.3697"	"14180"	"14180"	"14160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"292.7"	""	"330.8"	""	"313.7"	""	"382.1"	"2.1"	"568.4"	"566.0"	""	"585"	"51"	"34.000"	"27.000"	"0.000208029952743599"	"22"	"0.0001308"	"0.0002245"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLESFQVK"	"[K].qVLESFQVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"768.46509"	"1535.92290"	"1535.91975"	"2.05"	"0.00157"	"8/82"	"8"	"82"	"2015615.80523682"	"HCD"	"MS2"	"8.126602"	"179.8"	"100.000"	"48.7338"	"14377"	"14377"	"14351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"256.0"	""	"245.5"	""	"238.3"	""	"242.2"	""	"359.2"	"365.3"	""	"582"	"33"	"34.000"	"27.000"	"0.0137054401981513"	"19"	"0.0001308"	"0.0002861"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQLGHKGGGVVK"	"[R].lLqLGHKGGGVVK.[V]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"Q9WTR8"	"PH domain leucine-rich repeat protein phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Phlpp1 PE=1 SV=1"	"Q9WTR8"	"PH domain leucine-rich repeat protein phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Phlpp1 PE=1 SV=1"	"1"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"768.47632"	"1535.94536"	"1535.94708"	"-1.12"	"-0.00086"	"4/118"	"4"	"118"	"465143.035888672"	"HCD"	"MS2"	"28.15938"	"36.8"	"100.000"	"79.4623"	"26826"	"26826"	"26801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.0"	""	"38.9"	""	"50.3"	""	"73.6"	"1.0"	"80.3"	"74.8"	""	"427"	"9"	"33.000"	"26.000"	"2.42324809146039"	"19"	"0.007843"	"0.3176"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTDFPIK"	"[R].kTDFPIk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q2LC84"	"Protein numb homolog OS=Rattus norvegicus OX=10116 GN=Numb PE=1 SV=2"	"Q2LC84"	"Protein numb homolog OS=Rattus norvegicus OX=10116 GN=Numb PE=1 SV=2"	"1"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"512.66315"	"1535.97489"	"1535.97643"	"-1.00"	"-0.00051"	"5/62"	"5"	"62"	"3299575.41546631"	"HCD"	"MS2"	"45.05977"	"252.6"	"100.000"	"36.2945"	"9257"	"9257"	"9226"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"340.8"	""	"319.2"	""	"324.7"	""	"458.9"	"3.9"	"487.5"	"460.2"	""	"250"	"8"	"30.000"	"23.000"	"1.79023487409193"	"16"	"0.002953"	"0.052"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTLDMIK"	"[R].kTLDMIk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"1"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"768.49323"	"1535.97917"	"1535.97980"	"-0.41"	"-0.00031"	"8/64"	"8"	"64"	"1308289.1449585"	"HCD"	"MS2"	"0"	"126.5"	"100.000"	"37.5348"	"9766"	"9766"	"9736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.0"	""	"186.8"	""	"199.1"	""	"153.4"	""	"208.9"	"224.0"	""	"221"	"30"	"30.000"	"23.000"	"0.0101944142700601"	""	"0.001058"	"0.01338"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTLDMIK"	"[R].kTLDMIk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"1"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"768.49377"	"1535.98027"	"1535.97980"	"0.31"	"0.00024"	"7/64"	"7"	"64"	"785062.202209473"	"HCD"	"MS2"	"6.176428"	"80.9"	"100.000"	"37.6810"	"9869"	"9869"	"9841"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.7"	""	"128.8"	""	"127.4"	""	"102.3"	"0.4"	"131.6"	"132.0"	""	"221"	"20"	"30.000"	"23.000"	"0.103362326993304"	"22"	"0.00103"	"0.01112"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENFQNWLK"	"[R].eNFQNWLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"768.93079"	"1536.85430"	"1536.85748"	"-2.07"	"-0.00159"	"6/68"	"6"	"68"	"5410039.68426514"	"HCD"	"MS2"	"0"	"481.1"	"100.000"	"53.0343"	"16078"	"16078"	"16066"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"775.5"	""	"564.8"	""	"600.9"	""	"843.5"	"2.2"	"866.0"	"904.3"	""	"974"	"36"	"36.000"	"29.000"	"0.0136624618168248"	"26"	"0.0001889"	"0.0006678"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENFQNWLK"	"[R].eNFQNWLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"768.93097"	"1536.85466"	"1536.85748"	"-1.84"	"-0.00141"	"7/68"	"7"	"68"	"5603328.48864746"	"HCD"	"MS2"	"0"	"485.6"	"100.000"	"53.2097"	"16200"	"16200"	"16182"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"749.7"	""	"584.9"	""	"604.1"	""	"865.8"	"5.6"	"867.2"	"922.9"	""	"974"	"35"	"36.000"	"29.000"	"0.0139807014344603"	"28"	"0.0001889"	"0.0009208"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENFQNWLK"	"[R].eNFQNWLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"768.93219"	"1536.85710"	"1536.85748"	"-0.25"	"-0.00019"	"7/68"	"7"	"68"	"9264491.53814697"	"HCD"	"MS2"	"22.81236"	"766.2"	"100.000"	"52.9224"	"16083"	"16083"	"16054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1169.5"	""	"961.3"	""	"968.1"	""	"1428.0"	"4.6"	"1332.8"	"1390.3"	""	"956"	"39"	"36.000"	"29.000"	"0.00594877984426723"	"29"	"0.0002277"	"0.001278"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENFQNWLK"	"[R].eNFQNWLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.5641"	"0.0000"	"1"	"1"	"1"	"768.93231"	"1536.85735"	"1536.85748"	"-0.09"	"-0.00007"	"7/68"	"7"	"68"	"8606083.89904785"	"HCD"	"MS2"	"0"	"736.9"	"100.000"	"52.7352"	"15956"	"15956"	"15938"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1142.6"	""	"876.1"	""	"943.8"	""	"1395.8"	"5.8"	"1299.8"	"1313.2"	""	"955"	"39"	"36.000"	"29.000"	"0.00603911605917475"	""	"0.0002277"	"0.001178"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENFQNWLK"	"[R].eNFQNWLk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.4706"	"0.0000"	"1"	"1"	"1"	"512.95746"	"1536.85782"	"1536.85748"	"0.22"	"0.00011"	"6/68"	"6"	"68"	"8485707.11773682"	"HCD"	"MS2"	"24.81871"	"263.0"	"100.000"	"52.8368"	"15998"	"15998"	"15970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"392.3"	""	"320.0"	""	"328.8"	""	"469.9"	""	"478.0"	"505.5"	""	"929"	"17"	"36.000"	"29.000"	"0.891221630041349"	"23"	"0.0004557"	"0.002621"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIESYQNLTR"	"[R].aLIESYQNLTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZM5"	"Abl interactor 1 OS=Rattus norvegicus OX=10116 GN=Abi1 PE=1 SV=3"	"Q9QZM5"	"Abl interactor 1 OS=Rattus norvegicus OX=10116 GN=Abi1 PE=1 SV=3"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"768.93268"	"1536.85808"	"1536.85832"	"-0.16"	"-0.00012"	"7/100"	"7"	"100"	"1022279.18847656"	"HCD"	"MS2"	"20.48446"	"97.0"	"100.000"	"47.1887"	"13697"	"13697"	"13672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.0"	""	"144.5"	""	"132.9"	""	"148.3"	""	"173.1"	"179.7"	""	"929"	"34"	"36.000"	"29.000"	"0.0180295845002656"	"29"	"0"	"0.0001819"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIESYQNLTR"	"[R].aLIESYQNLTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZM5"	"Abl interactor 1 OS=Rattus norvegicus OX=10116 GN=Abi1 PE=1 SV=3"	"Q9QZM5"	"Abl interactor 1 OS=Rattus norvegicus OX=10116 GN=Abi1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"768.93311"	"1536.85893"	"1536.85832"	"0.40"	"0.00031"	"8/100"	"8"	"100"	"1207150.8104248"	"HCD"	"MS2"	"18.09297"	"102.1"	"100.000"	"47.4476"	"13851"	"13851"	"13826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.1"	""	"142.1"	""	"127.6"	""	"152.8"	"0.9"	"208.8"	"186.8"	""	"928"	"11"	"36.000"	"29.000"	"3.33824325793716"	"13"	"0.0001889"	"0.0007425"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNSLVLPIVLWGR"	"[M].aGNSLVLPIVLWGR.[K]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9ERH3"	"WD repeat-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Wdr7 PE=1 SV=1"	"Q9ERH3"	"WD repeat-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Wdr7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"768.94720"	"1536.88713"	"1536.88967"	"-1.65"	"-0.00127"	"5/126"	"5"	"126"	"133140.308288574"	"HCD"	"MS2"	"0"	"0.9"	"100.000"	"102.1697"	"34664"	"34664"	"34658"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.2"	""	""	""	""	""	""	""	"3.1"	"2.4"	"NoQuanLabels"	"810"	"24"	"36.000"	"29.000"	"0.173962252839779"	"14"	"0.002489"	"0.03766"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNSLVLPIVLWGR"	"[M].aGNSLVLPIVLWGR.[K]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9ERH3"	"WD repeat-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Wdr7 PE=1 SV=1"	"Q9ERH3"	"WD repeat-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Wdr7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"768.94788"	"1536.88848"	"1536.88967"	"-0.78"	"-0.00060"	"4/126"	"4"	"126"	"118243.19329834"	"HCD"	"MS2"	"0"	"0.8"	"100.000"	"101.9920"	"34618"	"34618"	"34614"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"2.4"	""	"2.6"	""	"2.1"	""	"NoQuanLabels"	"800"	"11"	"36.000"	"29.000"	"3.20671225355072"	"13"	"0.002361"	"0.03473"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQPDAPLWVR"	"[R].iLQPDAPLWVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A929"	"WD repeat-containing protein 81 OS=Rattus norvegicus OX=10116 GN=Wdr81 PE=3 SV=1"	"D4A929"	"WD repeat-containing protein 81 OS=Rattus norvegicus OX=10116 GN=Wdr81 PE=3 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"768.95929"	"1536.91130"	"1536.90996"	"0.87"	"0.00067"	"5/96"	"5"	"96"	"1082598.80151367"	"HCD"	"MS2"	"16.59713"	"78.0"	"100.000"	"63.0777"	"20210"	"20210"	"20179"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.6"	""	"102.2"	""	"113.7"	""	"126.7"	"0.2"	"149.8"	"144.3"	""	"697"	"29"	"35.000"	"28.000"	"0.047555722310124"	"24"	"0.00103"	"0.01199"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQPDAPLWVR"	"[R].iLQPDAPLWVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A929"	"WD repeat-containing protein 81 OS=Rattus norvegicus OX=10116 GN=Wdr81 PE=3 SV=1"	"D4A929"	"WD repeat-containing protein 81 OS=Rattus norvegicus OX=10116 GN=Wdr81 PE=3 SV=1"	"0"	"2"	"2"	"0.3462"	"0.0000"	"1"	"1"	"1"	"768.95959"	"1536.91191"	"1536.90996"	"1.27"	"0.00097"	"5/96"	"5"	"96"	"1047194.09246826"	"HCD"	"MS2"	"0"	"80.8"	"100.000"	"62.9847"	"20119"	"20119"	"20089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.9"	""	"111.4"	""	"116.4"	""	"126.8"	""	"153.6"	"162.1"	""	"698"	"26"	"35.000"	"28.000"	"0.0803203194275569"	""	"0.001158"	"0.01526"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYLEVLLK"	"[R].nSYLEVLLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.3659"	"0.0000"	"1"	"1"	"1"	"768.97290"	"1536.93852"	"1536.94015"	"-1.06"	"-0.00081"	"8/86"	"8"	"86"	"713494.772399902"	"HCD"	"MS2"	"9.760015"	"62.2"	"100.000"	"66.1314"	"21457"	"21457"	"21427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.0"	""	"71.5"	""	"88.3"	""	"114.4"	"0.9"	"113.6"	"107.4"	""	"440"	"41"	"33.000"	"26.000"	"0.00163841034259317"	""	"0"	"0.000127"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYLEVLLK"	"[R].nSYLEVLLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"512.98438"	"1536.93857"	"1536.94015"	"-1.03"	"-0.00053"	"7/86"	"7"	"86"	"5411113.00561523"	"HCD"	"MS2"	"5.939733"	"146.8"	"100.000"	"65.7694"	"21309"	"21309"	"21283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.2"	""	"188.9"	""	"209.6"	""	"270.1"	""	"270.7"	"273.9"	""	"440"	"29"	"33.000"	"26.000"	"0.0279526303145879"	"24"	"0.0001308"	"0.0002085"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYLEVLLK"	"[R].nSYLEVLLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.5741"	"0.0000"	"1"	"1"	"1"	"768.97302"	"1536.93877"	"1536.94015"	"-0.90"	"-0.00069"	"16/86"	"16"	"86"	"7791263.51702881"	"HCD"	"MS2"	"3.566364"	"537.6"	"100.000"	"65.7855"	"21316"	"21316"	"21299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"736.2"	""	"675.6"	""	"770.9"	""	"976.7"	"8.2"	"918.2"	"1005.7"	""	"440"	"54"	"33.000"	"26.000"	"8.71811675361966E-05"	""	"0.0001308"	"0.0002509"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYLEVLLK"	"[R].nSYLEVLLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"768.97327"	"1536.93926"	"1536.94015"	"-0.58"	"-0.00045"	"13/86"	"13"	"86"	"681411.383056641"	"HCD"	"MS2"	"20.35831"	"56.7"	"100.000"	"66.1992"	"21432"	"21432"	"21401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.6"	""	"67.3"	""	"80.5"	""	"103.2"	""	"97.8"	"115.8"	""	"437"	"39"	"33.000"	"26.000"	"0.00269433406060516"	""	"0"	"4.909E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYLEVLLK"	"[R].nSYLEVLLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"512.98468"	"1536.93949"	"1536.94015"	"-0.43"	"-0.00022"	"7/86"	"7"	"86"	"5282403.20574951"	"HCD"	"MS2"	"4.324405"	"149.2"	"100.000"	"65.8375"	"21284"	"21284"	"21257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.9"	""	"188.4"	""	"220.9"	""	"263.9"	""	"280.2"	"289.8"	""	"439"	"30"	"33.000"	"26.000"	"0.0221531008493832"	"21"	"0.0001889"	"0.0004057"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYLEVLLK"	"[R].nSYLEVLLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.6964"	"0.0000"	"1"	"1"	"1"	"768.97339"	"1536.93950"	"1536.94015"	"-0.42"	"-0.00033"	"16/86"	"16"	"86"	"7705141.79400635"	"HCD"	"MS2"	"0"	"503.0"	"100.000"	"65.8514"	"21290"	"21290"	"21273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"669.6"	""	"662.9"	""	"711.5"	""	"904.4"	"2.6"	"852.4"	"960.8"	""	"439"	"56"	"33.000"	"26.000"	"5.51359071716353E-05"	""	"0.0001308"	"0.0003124"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQSFVLK"	"[K].kQSFVLk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.00653"	"1537.00504"	"1537.00806"	"-1.97"	"-0.00101"	"6/60"	"6"	"60"	"15349474.2254028"	"HCD"	"MS2"	"29.77455"	"914.3"	"85.679"	"35.9187"	"9102"	"9102"	"9083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1379.6"	""	"1232.8"	""	"1327.7"	""	"1531.3"	"14.6"	"1546.3"	"1619.8"	""	"152"	"4"	"28.000"	"21.000"	"2.85636427259218"	"13"	"0.0006037"	"0.005528"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMNFEPNK"	"[K].vTMNFEPNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"769.42487"	"1537.84245"	"1537.84487"	"-1.57"	"-0.00121"	"8/82"	"8"	"82"	"1999541.21765137"	"HCD"	"MS2"	"100"	"180.0"	"100.000"	"42.1201"	"11640"	"11640"	"11615"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.8"	""	"204.2"	""	"233.8"	""	"308.5"	""	"388.3"	"382.8"	""	"934"	"16"	"36.000"	"29.000"	"1.14634906362491"	"17"	"0.0001889"	"0.0007991"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMNFEPNK"	"[K].vTMNFEPNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"769.42548"	"1537.84368"	"1537.84487"	"-0.78"	"-0.00060"	"14/82"	"14"	"82"	"2008368.77435303"	"HCD"	"MS2"	"0"	"171.3"	"100.000"	"42.2694"	"11745"	"11745"	"11731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.6"	""	"197.8"	""	"184.6"	""	"321.1"	"3.9"	"402.0"	"366.8"	""	"948"	"46"	"36.000"	"29.000"	"0.00121276971039328"	"25"	"0"	"9.768E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLSAAPPSYFR"	"[R].vTLSAAPPSYFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"769.43182"	"1537.85637"	"1537.85759"	"-0.80"	"-0.00061"	"6/102"	"6"	"102"	"2920176.70739746"	"HCD"	"MS2"	"14.203"	"181.3"	"100.000"	"49.1535"	"14501"	"14501"	"14479"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.0"	""	"268.5"	""	"276.0"	""	"267.4"	""	"332.7"	"344.3"	""	"944"	"21"	"36.000"	"29.000"	"0.359701292731994"	"19"	"7.476E-05"	"0.0001944"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNDPFIQK"	"[R].aFNDPFIQk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"769.44177"	"1537.87627"	"1537.87789"	"-1.05"	"-0.00081"	"14/76"	"14"	"76"	"1627763.35070801"	"HCD"	"MS2"	"0"	"151.3"	"100.000"	"51.9807"	"15648"	"15648"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"253.1"	""	"199.3"	""	"224.1"	""	"213.4"	""	"283.2"	"260.8"	""	"835"	"44"	"36.000"	"29.000"	"0.00151585087866517"	"28"	"0"	"0.0001282"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNDPFIQK"	"[R].aFNDPFIQk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"769.44202"	"1537.87676"	"1537.87789"	"-0.73"	"-0.00056"	"14/76"	"14"	"76"	"1492746.12268066"	"HCD"	"MS2"	"0"	"139.3"	"100.000"	"52.1695"	"15775"	"15775"	"15750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.5"	""	"201.5"	""	"191.9"	""	"192.0"	"0.5"	"249.2"	"254.0"	""	"825"	"43"	"36.000"	"29.000"	"0.00216483077353031"	"26"	"0"	"6.932E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFNTPQTK"	"[K].fPFNTPQTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"769.44226"	"1537.87724"	"1537.87789"	"-0.42"	"-0.00032"	"6/80"	"6"	"80"	"1590332.67303467"	"HCD"	"MS2"	"0"	"126.0"	"100.000"	"46.8890"	"13575"	"13575"	"13544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.7"	""	"192.7"	""	"166.4"	""	"196.7"	"1.4"	"240.0"	"218.0"	""	"813"	"47"	"36.000"	"29.000"	"0.000727881279665346"	"24"	"0.0001889"	"0.0005796"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFNTPQTK"	"[K].fPFNTPQTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"513.29749"	"1537.87790"	"1537.87789"	"0.01"	"0.00001"	"9/80"	"9"	"80"	"3565912.43243408"	"HCD"	"MS2"	"60.01888"	"133.4"	"100.000"	"47.2103"	"13754"	"13754"	"13730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.5"	""	"140.7"	""	"262.4"	""	"235.7"	""	"195.5"	"276.5"	""	"808"	"27"	"36.000"	"29.000"	"0.0857790762648089"	"17"	"0.0001889"	"0.0008111"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPFNTPQTK"	"[K].fPFNTPQTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"769.44269"	"1537.87810"	"1537.87789"	"0.14"	"0.00011"	"6/80"	"6"	"80"	"2191081.18054199"	"HCD"	"MS2"	"0"	"155.8"	"100.000"	"47.1986"	"13749"	"13749"	"13730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.7"	""	"234.0"	""	"223.2"	""	"233.0"	""	"298.9"	"274.8"	""	"806"	"47"	"36.000"	"29.000"	"0.000745255253448166"	"24"	"0.0001889"	"0.000788"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].eDAVLEYLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6727"	"0.0000"	"1"	"1"	"1"	"769.44690"	"1537.88652"	"1537.88778"	"-0.82"	"-0.00063"	"16/74"	"16"	"74"	"2556321.43634033"	"HCD"	"MS2"	"26.74314"	"187.4"	"100.000"	"60.4701"	"19145"	"19145"	"19123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.3"	""	"226.6"	""	"220.1"	""	"306.0"	"0.0"	"386.5"	"379.3"	""	"809"	"55"	"36.000"	"29.000"	"0.000116659074301471"	""	"0"	"7.434E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].eDAVLEYLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"769.44739"	"1537.88750"	"1537.88778"	"-0.18"	"-0.00014"	"16/74"	"16"	"74"	"2865793.82043457"	"HCD"	"MS2"	"11.75061"	"236.8"	"100.000"	"60.4174"	"19070"	"19070"	"19049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.5"	""	"260.7"	""	"285.6"	""	"382.0"	"0.1"	"497.1"	"502.1"	""	"807"	"58"	"36.000"	"29.000"	"6.24947505731186E-05"	""	"0"	"8.445E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGFVPAAYVK"	"[R].qGFVPAAYVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"769.45886"	"1537.91045"	"1537.91427"	"-2.49"	"-0.00191"	"7/92"	"7"	"92"	"356925.448852539"	"HCD"	"MS2"	"100"	"45.8"	"100.000"	"46.6012"	"13505"	"13505"	"13474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.3"	""	"61.0"	""	"65.6"	""	"76.9"	""	"79.9"	"87.4"	""	"609"	"4"	"34.000"	"27.000"	"12.3761993730807"	"15"	"0.001966"	"0.02934"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGFVPAAYVK"	"[R].qGFVPAAYVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"769.46002"	"1537.91277"	"1537.91427"	"-0.98"	"-0.00075"	"16/92"	"16"	"92"	"2663955.58325195"	"HCD"	"MS2"	"24.60428"	"209.1"	"100.000"	"45.9520"	"13191"	"13191"	"13165"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"304.7"	""	"248.3"	""	"265.1"	""	"273.2"	""	"403.8"	"490.8"	""	"601"	"40"	"34.000"	"27.000"	"0.00336391083981879"	""	"0"	"6.504E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGFVPAAYVK"	"[R].qGFVPAAYVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"769.46057"	"1537.91387"	"1537.91427"	"-0.26"	"-0.00020"	"16/92"	"16"	"92"	"2677943.86737061"	"HCD"	"MS2"	"31.71028"	"210.0"	"100.000"	"46.1863"	"13335"	"13335"	"13312"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.5"	""	"271.6"	""	"267.2"	""	"275.6"	"3.3"	"386.8"	"497.8"	""	"594"	"42"	"34.000"	"27.000"	"0.00189128269709651"	""	"0"	"4.963E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AKEDFLK"	"[K].akEDFLk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"513.32312"	"1537.95481"	"1537.95569"	"-0.57"	"-0.00029"	"7/60"	"7"	"60"	"24529308.0928345"	"HCD"	"MS2"	"43.97832"	"1902.5"	"100.000"	"35.9690"	"9123"	"9123"	"9099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2692.9"	""	"2529.5"	""	"2567.5"	""	"3230.9"	""	"3469.9"	"3561.7"	""	"321"	"7"	"32.000"	"25.000"	"3.56020525377936"	"17"	"0.003286"	"0.06892"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"AKQDFLK"	"[].akqDFLk.[]"	"N-Term(TMT6plex); K2(TMT6plex); Q3(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"513.32312"	"1537.95481"	"1537.95569"	"-0.57"	"-0.00029"	"7/58"	"7"	"58"	"24529308.0928345"	"HCD"	"MS2"	"43.97832"	"1902.5"	"100.000"	"35.9690"	"9123"	"9123"	"9099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2692.9"	""	"2529.5"	""	"2567.5"	""	"3230.9"	""	"3469.9"	"3561.7"	""	"321"	"7"	"32.000"	"25.000"	"3.56020525377936"	"17"	"0.003286"	"0.06892"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AKEDFLK"	"[K].akEDFLk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"7"	"513.32361"	"1537.95627"	"1537.95569"	"0.38"	"0.00019"	"11/60"	"11"	"60"	"24089541.1359253"	"HCD"	"MS2"	"33.18275"	"1580.3"	"100.000"	"36.0538"	"9201"	"9201"	"9177"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2334.4"	""	"2069.2"	""	"2146.2"	""	"2596.7"	""	"2893.4"	"2950.5"	""	"305"	"5"	"31.000"	"24.000"	"5.04974960260951"	"16"	"0.003286"	"0.07351"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"AKQDFLK"	"[].akqDFLk.[]"	"N-Term(TMT6plex); K2(TMT6plex); Q3(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"8"	"513.32361"	"1537.95627"	"1537.95569"	"0.38"	"0.00019"	"11/58"	"11"	"58"	"24089541.1359253"	"HCD"	"MS2"	"33.18275"	"1580.3"	"100.000"	"36.0538"	"9201"	"9201"	"9177"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2334.4"	""	"2069.2"	""	"2146.2"	""	"2596.7"	""	"2893.4"	"2950.5"	""	"305"	"5"	"31.000"	"24.000"	"5.04974960260951"	"16"	"0.003286"	"0.0735"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQSFVLK"	"[K].kqSFVLk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); Q2(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"1"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"3"	"513.33521"	"1537.99106"	"1537.99208"	"-0.66"	"-0.00034"	"4/60"	"4"	"60"	"16698929.6915894"	"HCD"	"MS2"	"20.80889"	"726.0"	"82.698"	"38.3644"	"10149"	"10149"	"10129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1030.3"	""	"846.2"	""	"951.4"	""	"1309.7"	""	"1340.8"	"1410.9"	""	"170"	"13"	"29.000"	"22.000"	"0.391218087544153"	"18"	"0.008737"	"0.3921"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQSFVLK"	"[K].kqSFVLk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); Q2(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.33521"	"1537.99106"	"1537.99208"	"-0.66"	"-0.00034"	"5/60"	"5"	"60"	"13063667.0783691"	"HCD"	"MS2"	"28.29334"	"635.2"	"97.548"	"38.3008"	"10080"	"10080"	"10055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"920.0"	""	"797.1"	""	"873.6"	""	"1071.5"	""	"1191.8"	"1171.7"	""	"170"	"11"	"29.000"	"22.000"	"0.649260416041038"	"13"	"0.009521"	"0.4247"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNQNMEGLK"	"[K].fNQNMEGLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"769.92377"	"1538.84026"	"1538.84012"	"0.09"	"0.00007"	"8/78"	"8"	"78"	"2705233.19299316"	"HCD"	"MS2"	"0"	"274.1"	"100.000"	"40.7678"	"11089"	"11089"	"11061"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"518.1"	""	"332.1"	""	"373.8"	""	"373.3"	""	"434.9"	"563.8"	""	"904"	"51"	"36.000"	"29.000"	"0.000370798898037078"	"25"	"0"	"0.0001193"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNQNMEGLK"	"[K].fNQNMEGLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"769.92413"	"1538.84099"	"1538.84012"	"0.57"	"0.00044"	"7/78"	"7"	"78"	"2544866.66595459"	"HCD"	"MS2"	"0"	"260.7"	"100.000"	"40.9466"	"11206"	"11206"	"11181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"453.9"	""	"308.2"	""	"363.1"	""	"367.9"	""	"416.3"	"565.3"	""	"906"	"35"	"36.000"	"29.000"	"0.0153496402731059"	"22"	"0.0001308"	"0.0002838"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APFDLFENK"	"[R].aPFDLFENk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"769.93311"	"1538.85893"	"1538.86190"	"-1.93"	"-0.00148"	"8/72"	"8"	"72"	"2574234.19702148"	"HCD"	"MS2"	"0"	"206.8"	"100.000"	"63.5820"	"20416"	"20416"	"20387"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"316.5"	""	"254.8"	""	"257.9"	""	"351.0"	""	"384.2"	"397.6"	""	"884"	"51"	"36.000"	"29.000"	"0.000313633373439818"	"26"	"0"	"0.000128"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APFDLFENK"	"[R].aPFDLFENk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"513.62500"	"1538.86045"	"1538.86190"	"-0.94"	"-0.00048"	"13/72"	"13"	"72"	"6022486.37506104"	"HCD"	"MS2"	"5.013258"	"169.3"	"100.000"	"63.9578"	"20569"	"20569"	"20547"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.4"	""	"204.9"	""	"244.2"	""	"264.0"	"0.6"	"327.5"	"331.2"	""	"879"	"38"	"36.000"	"29.000"	"0.00736137394013619"	"26"	"0.0001308"	"0.0003007"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APFDLFENK"	"[R].aPFDLFENk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"513.62500"	"1538.86045"	"1538.86190"	"-0.94"	"-0.00048"	"7/72"	"7"	"72"	"7063692.45874023"	"HCD"	"MS2"	"6.365943"	"193.4"	"100.000"	"63.8673"	"20479"	"20479"	"20457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"268.2"	""	"210.0"	""	"262.3"	""	"321.6"	"1.2"	"384.9"	"386.5"	""	"879"	"32"	"36.000"	"29.000"	"0.0308289603655577"	"25"	"0.0001308"	"0.0003138"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APFDLFENK"	"[R].aPFDLFENk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"769.93427"	"1538.86125"	"1538.86190"	"-0.42"	"-0.00032"	"8/72"	"8"	"72"	"2695804.71331787"	"HCD"	"MS2"	"5.891763"	"216.1"	"100.000"	"63.5284"	"20341"	"20341"	"20313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.0"	""	"262.2"	""	"302.1"	""	"373.0"	"1.4"	"405.1"	"396.1"	""	"877"	"50"	"36.000"	"29.000"	"0.000447681963605818"	"25"	"0"	"8.786E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APFDLFENK"	"[R].aPFDLFENk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"769.93433"	"1538.86138"	"1538.86190"	"-0.34"	"-0.00026"	"8/72"	"8"	"72"	"8223723.7677002"	"HCD"	"MS2"	"0"	"580.5"	"100.000"	"63.8701"	"20533"	"20533"	"20515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"816.9"	""	"685.3"	""	"774.0"	""	"948.8"	""	"1139.3"	"1142.2"	""	"873"	"49"	"36.000"	"29.000"	"0.000490890071136563"	"25"	"0.0001859"	"0.0003251"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APFDLFENK"	"[R].aPFDLFENk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"769.93500"	"1538.86272"	"1538.86190"	"0.53"	"0.00041"	"8/72"	"8"	"72"	"8231556.96606445"	"HCD"	"MS2"	"0"	"604.2"	"100.000"	"63.8211"	"20460"	"20460"	"20441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"874.7"	""	"681.2"	""	"795.2"	""	"992.3"	"1.0"	"1187.4"	"1198.4"	""	"857"	"49"	"36.000"	"29.000"	"0.000489723366457417"	"25"	"0.0001859"	"0.0003438"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYTGVNAISK"	"[K].qYTGVNAISk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"769.95062"	"1538.89397"	"1538.89426"	"-0.19"	"-0.00015"	"15/102"	"15"	"102"	"325168.845031738"	"HCD"	"MS2"	"23.25794"	"35.3"	"100.000"	"36.0930"	"9174"	"9174"	"9146"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.2"	""	"48.0"	""	"44.0"	""	"62.5"	"0.1"	"53.9"	"69.0"	""	"702"	"54"	"35.000"	"28.000"	"0.000131010805386298"	"20"	"0"	"5.109E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEYFPNGK"	"[K].iLEYFPNGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"513.63806"	"1538.89963"	"1538.89829"	"0.87"	"0.00045"	"8/68"	"8"	"68"	"5120716.0055542"	"HCD"	"MS2"	"46.43456"	"91.7"	"100.000"	"57.7642"	"17991"	"17991"	"17963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.3"	""	"101.5"	""	"104.4"	""	"167.9"	""	"187.6"	"218.6"	""	"680"	"18"	"35.000"	"28.000"	"0.556517617285455"	"15"	"0.0004166"	"0.002363"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLLAGPPGTGK"	"[R].aVLLAGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7746"	"0.0000"	"1"	"1"	"1"	"769.98663"	"1538.96599"	"1538.96703"	"-0.68"	"-0.00052"	"11/88"	"11"	"88"	"2932589.32818604"	"HCD"	"MS2"	"0"	"160.2"	"100.000"	"44.0477"	"12418"	"12418"	"12390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.6"	""	"203.9"	""	"241.6"	""	"235.3"	"0.7"	"276.6"	"293.4"	""	"267"	"71"	"31.000"	"24.000"	"1.16541677679813E-06"	""	"0"	"4.382E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLLAGPPGTGK"	"[R].aVLLAGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"513.66046"	"1538.96683"	"1538.96703"	"-0.13"	"-0.00007"	"14/88"	"14"	"88"	"5370318.55316162"	"HCD"	"MS2"	"62.57102"	"158.0"	"100.000"	"44.2587"	"12554"	"12554"	"12524"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"239.9"	""	"226.8"	""	"237.8"	""	"253.7"	"0.6"	"260.4"	"275.5"	""	"265"	"54"	"31.000"	"24.000"	"5.85080842743139E-05"	"20"	"0"	"8.128E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLLAGPPGTGK"	"[R].aVLLAGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7532"	"0.0000"	"1"	"1"	"1"	"769.98749"	"1538.96770"	"1538.96703"	"0.43"	"0.00033"	"11/88"	"11"	"88"	"3179076.69805908"	"HCD"	"MS2"	"19.68823"	"173.5"	"100.000"	"44.2864"	"12565"	"12565"	"12540"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.2"	""	"227.8"	""	"265.9"	""	"272.0"	"1.6"	"317.5"	"290.2"	""	"252"	"77"	"31.000"	"24.000"	"2.60237899632127E-07"	""	"0"	"2.282E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLLAGPPGTGK"	"[R].aVLLAGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"513.66083"	"1538.96793"	"1538.96703"	"0.58"	"0.00030"	"13/88"	"13"	"88"	"6850001.87524414"	"HCD"	"MS2"	"18.01593"	"197.4"	"100.000"	"44.0846"	"12433"	"12433"	"12406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.0"	""	"263.9"	""	"292.8"	""	"305.2"	"1.8"	"345.4"	"358.6"	""	"260"	"42"	"31.000"	"24.000"	"0.000779728399132163"	"22"	"0"	"7.47E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLGALTLPLAR"	"[R].aLTLGALTLPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"513.66510"	"1538.98075"	"1538.98313"	"-1.55"	"-0.00079"	"11/106"	"11"	"106"	"301659.516906738"	"HCD"	"MS2"	"16.16576"	"10.7"	"100.000"	"75.7750"	"25384"	"25384"	"25359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"12.4"	""	"14.5"	""	"19.1"	""	"22.2"	"21.1"	""	"195"	"39"	"29.000"	"22.000"	"0.0012134017464771"	"20"	"0"	"8.458E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLGALTLPLAR"	"[R].aLTLGALTLPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9242"	"0.0000"	"1"	"1"	"1"	"513.66516"	"1538.98093"	"1538.98313"	"-1.43"	"-0.00073"	"13/106"	"13"	"106"	"6581611.02770996"	"HCD"	"MS2"	"4.232887"	"38.2"	"100.000"	"75.4013"	"25232"	"25232"	"25215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.5"	""	"51.2"	""	"48.5"	""	"63.6"	"0.2"	"64.9"	"81.5"	""	"195"	"66"	"29.000"	"22.000"	"2.47175041473547E-06"	"22"	"0"	"3.55E-06"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLGALTLPLAR"	"[R].aLTLGALTLPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"769.99445"	"1538.98161"	"1538.98313"	"-0.98"	"-0.00076"	"12/106"	"12"	"106"	"800110.065185547"	"HCD"	"MS2"	"17.32612"	"34.0"	"100.000"	"75.6068"	"25315"	"25315"	"25295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.3"	""	"37.6"	""	"42.0"	""	"66.0"	"1.7"	"62.5"	"69.7"	""	"193"	"56"	"29.000"	"22.000"	"2.40174731214251E-05"	""	"0"	"6.358E-06"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLGALTLPLAR"	"[R].aLTLGALTLPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"769.99487"	"1538.98247"	"1538.98313"	"-0.43"	"-0.00033"	"11/106"	"11"	"106"	"2879360.3949585"	"HCD"	"MS2"	"0"	"114.1"	"100.000"	"75.3048"	"25140"	"25140"	"25121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.3"	""	"141.2"	""	"163.4"	""	"205.0"	""	"209.0"	"233.5"	""	"174"	"61"	"29.000"	"22.000"	"7.05536120332842E-06"	""	"0"	"6.326E-06"	"1.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLGALTLPLAR"	"[R].aLTLGALTLPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"769.99518"	"1538.98308"	"1538.98313"	"-0.03"	"-0.00002"	"11/106"	"11"	"106"	"2935540.00671387"	"HCD"	"MS2"	"0"	"117.3"	"100.000"	"75.2905"	"25186"	"25186"	"25167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.1"	""	"158.0"	""	"162.5"	""	"208.4"	"0.3"	"205.7"	"229.6"	""	"174"	"61"	"29.000"	"22.000"	"7.70050580552827E-06"	""	"0"	"1.728E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLGALTLPLAR"	"[R].aLTLGALTLPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"513.66589"	"1538.98313"	"1538.98313"	"0.00"	"0.00000"	"12/106"	"12"	"106"	"5991442.38867188"	"HCD"	"MS2"	"6.418422"	"37.1"	"100.000"	"75.4202"	"25187"	"25187"	"25169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.5"	""	"45.1"	""	"44.6"	""	"66.8"	"1.5"	"73.9"	"74.3"	""	"174"	"62"	"29.000"	"22.000"	"5.23021151610452E-06"	""	"0"	"5.239E-06"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLGALTLPLAR"	"[R].aLTLGALTLPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"769.99567"	"1538.98406"	"1538.98313"	"0.60"	"0.00046"	"10/106"	"10"	"106"	"851490.962890625"	"HCD"	"MS2"	"20.5212"	"35.3"	"100.000"	"75.6214"	"25269"	"25269"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.5"	""	"39.3"	""	"47.9"	""	"59.5"	""	"71.6"	"69.2"	""	"167"	"55"	"29.000"	"22.000"	"2.88859380484812E-05"	""	"0"	"1.028E-05"	"1.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFPFHFMLDR"	"[K].tFPFHFMLDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"513.93683"	"1539.79593"	"1539.79797"	"-1.32"	"-0.00068"	"5/88"	"5"	"88"	"3549826.36431885"	"HCD"	"MS2"	"18.7575"	"53.8"	"100.000"	"60.7516"	"19260"	"19260"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.2"	""	"91.7"	""	"80.9"	""	"75.6"	"2.3"	"94.9"	"95.2"	""	"802"	"31"	"36.000"	"29.000"	"0.0311992656966961"	"24"	"0"	"9.802E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFPFHFMLDR"	"[K].tFPFHFMLDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7292"	"0.0000"	"1"	"1"	"1"	"513.93781"	"1539.79886"	"1539.79797"	"0.58"	"0.00030"	"6/88"	"6"	"88"	"3583334.03552246"	"HCD"	"MS2"	"10.39968"	"55.4"	"100.000"	"60.6114"	"19149"	"19149"	"19129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.3"	""	"81.8"	""	"87.0"	""	"74.6"	""	"100.2"	"107.6"	""	"816"	"48"	"36.000"	"29.000"	"0.000697686248556837"	"29"	"0"	"4.786E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYIPLEMLR"	"[K].eFYIPLEMLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"770.42413"	"1539.84099"	"1539.84425"	"-2.12"	"-0.00163"	"6/84"	"6"	"84"	"421467.316223145"	"HCD"	"MS2"	"33.42528"	"24.5"	"100.000"	"79.2176"	"26726"	"26726"	"26705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.1"	""	"39.1"	""	"38.5"	""	"34.6"	""	"45.3"	"48.3"	""	"878"	"25"	"36.000"	"29.000"	"0.150475058293892"	"28"	"0.0001308"	"0.0002291"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYIPLEMLR"	"[K].eFYIPLEMLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.3200"	"0.0000"	"1"	"1"	"1"	"770.42535"	"1539.84343"	"1539.84425"	"-0.53"	"-0.00041"	"6/84"	"6"	"84"	"458808.54309082"	"HCD"	"MS2"	"33.30351"	"28.4"	"100.000"	"79.2168"	"26777"	"26777"	"26751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.2"	""	"46.9"	""	"34.0"	""	"48.0"	""	"50.2"	"52.6"	""	"869"	"25"	"36.000"	"29.000"	"0.124735416288973"	""	"0.0002277"	"0.001267"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSNFMDGLK"	"[R].iGSNFMDGLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"770.43292"	"1539.85857"	"1539.86052"	"-1.27"	"-0.00098"	"9/92"	"9"	"92"	"4325027.49475098"	"HCD"	"MS2"	"0"	"387.0"	"100.000"	"56.3620"	"17472"	"17472"	"17445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"644.9"	""	"580.8"	""	"688.9"	""	"394.0"	""	"736.9"	"622.3"	""	"831"	"29"	"36.000"	"29.000"	"0.0548998336004523"	"18"	"0"	"9.046E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSNFMDGLK"	"[R].iGSNFMDGLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"770.43359"	"1539.85991"	"1539.86052"	"-0.40"	"-0.00030"	"14/92"	"14"	"92"	"1920220.46295166"	"HCD"	"MS2"	"0"	"180.5"	"100.000"	"56.6640"	"17595"	"17595"	"17573"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.4"	""	"264.2"	""	"302.6"	""	"175.0"	"0.8"	"348.2"	"319.4"	""	"834"	"41"	"36.000"	"29.000"	"0.00323695047634164"	"18"	"0"	"2.874E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSNFMDGLK"	"[R].iGSNFMDGLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"770.43408"	"1539.86089"	"1539.86052"	"0.24"	"0.00018"	"9/92"	"9"	"92"	"3707329.22796631"	"HCD"	"MS2"	"7.589734"	"321.6"	"100.000"	"56.1449"	"17329"	"17329"	"17307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"553.2"	""	"507.8"	""	"551.0"	""	"315.5"	"1.2"	"598.4"	"514.3"	""	"842"	"40"	"36.000"	"29.000"	"0.00430806349750197"	"19"	"0"	"4.94E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSNFMDGLK"	"[R].iGSNFMDGLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"770.43481"	"1539.86235"	"1539.86052"	"1.19"	"0.00092"	"13/92"	"13"	"92"	"1439857.25927734"	"HCD"	"MS2"	"5.139628"	"133.0"	"100.000"	"56.5003"	"17474"	"17474"	"17451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.0"	""	"191.5"	""	"208.9"	""	"144.5"	"1.4"	"260.9"	"240.8"	""	"827"	"35"	"36.000"	"29.000"	"0.0145035899879387"	"17"	"0"	"3.013E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSDYNIQK"	"[R].tLSDYNIQk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"4"	"P62982"	"Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2"	"P62986; P62982; P0CG51; Q63429"	"Ubiquitin-60S ribosomal protein L40 OS=Rattus norvegicus OX=10116 GN=Uba52 PE=1 SV=2; Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2; Polyubiquitin-B OS=Rattus norvegicus OX=10116 GN=Ubb PE=1 SV=1; Polyubiquitin-C OS=Rattus norvegicus OX=10116 GN=Ubc PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"770.44122"	"1539.87517"	"1539.87828"	"-2.02"	"-0.00155"	"7/76"	"7"	"76"	"3318969.80499268"	"HCD"	"MS2"	"100"	"322.3"	"100.000"	"39.7052"	"10657"	"10657"	"10630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"294.1"	""	"266.6"	""	"272.2"	""	"812.2"	""	"713.3"	"715.0"	""	"775"	"36"	"35.000"	"28.000"	"0.00910482718078719"	""	"0.0001308"	"0.0003136"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSDYNIQK"	"[R].tLSDYNIQk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"4"	"P62982"	"Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2"	"P62986; P62982; P0CG51; Q63429"	"Ubiquitin-60S ribosomal protein L40 OS=Rattus norvegicus OX=10116 GN=Uba52 PE=1 SV=2; Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2; Polyubiquitin-B OS=Rattus norvegicus OX=10116 GN=Ubb PE=1 SV=1; Polyubiquitin-C OS=Rattus norvegicus OX=10116 GN=Ubc PE=1 SV=1"	"0"	"2"	"2"	"0.5641"	"0.0000"	"1"	"1"	"1"	"770.44208"	"1539.87688"	"1539.87828"	"-0.91"	"-0.00070"	"8/76"	"8"	"76"	"2976612.847229"	"HCD"	"MS2"	"100"	"277.0"	"100.000"	"39.8584"	"10761"	"10761"	"10734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"262.4"	""	"210.7"	""	"257.7"	""	"687.7"	""	"631.3"	"591.3"	""	"759"	"39"	"35.000"	"28.000"	"0.00494551792422647"	""	"0"	"0.0001442"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFTIGDAVSK"	"[R].gSFTIGDAVSk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"770.44269"	"1539.87810"	"1539.87828"	"-0.12"	"-0.00009"	"10/96"	"10"	"96"	"1770381.69146729"	"HCD"	"MS2"	"0"	"146.4"	"100.000"	"43.7907"	"12313"	"12313"	"12290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.9"	""	"225.0"	""	"160.6"	""	"274.3"	""	"259.1"	"238.4"	""	"766"	"51"	"35.000"	"28.000"	"0.000321513174836929"	"26"	"0"	"1.087E-05"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFTIGDAVSK"	"[R].gSFTIGDAVSk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"770.44275"	"1539.87822"	"1539.87828"	"-0.04"	"-0.00003"	"10/96"	"10"	"96"	"2186229.40435791"	"HCD"	"MS2"	"0"	"175.0"	"100.000"	"44.0659"	"12475"	"12475"	"12447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.5"	""	"268.3"	""	"200.0"	""	"311.6"	"0.1"	"311.2"	"276.0"	""	"766"	"52"	"35.000"	"28.000"	"0.000251882951707126"	"26"	"0"	"1.347E-05"	"1.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEYFPNGK"	"[K].iLEYFPnGk.[K]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"513.96552"	"1539.88199"	"1539.88230"	"-0.20"	"-0.00010"	"7/68"	"7"	"68"	"2184365.63671875"	"HCD"	"MS2"	"5.398425"	"71.9"	"100.000"	"61.0258"	"19372"	"19372"	"19347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.0"	""	"86.6"	""	"88.6"	""	"126.6"	""	"153.8"	"163.2"	""	"758"	"14"	"35.000"	"28.000"	"1.50535597248918"	"21"	"0.0008453"	"0.008354"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEYFPNGK"	"[K].iLEYFPnGk.[K]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"513.96582"	"1539.88291"	"1539.88230"	"0.39"	"0.00020"	"8/68"	"8"	"68"	"5130976.93359375"	"HCD"	"MS2"	"11.82682"	"119.5"	"100.000"	"61.7037"	"19595"	"19595"	"19577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.9"	""	"96.3"	""	"104.5"	""	"245.9"	""	"297.6"	"300.9"	""	"744"	"23"	"35.000"	"28.000"	"0.177232327091615"	"22"	"0.0006037"	"0.004363"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSFTPPEK"	"[K].yLSFTPPEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"770.44513"	"1539.88298"	"1539.88230"	"0.44"	"0.00034"	"7/74"	"7"	"74"	"822571.534790039"	"HCD"	"MS2"	"0"	"77.1"	"100.000"	"51.1982"	"15378"	"15378"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.7"	""	"103.9"	""	"109.8"	""	"127.2"	"1.1"	"141.4"	"144.8"	""	"742"	"40"	"35.000"	"28.000"	"0.0037964170013616"	"15"	"0.0001308"	"0.000312"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSFTPPEK"	"[K].yLSFTPPEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"513.96606"	"1539.88364"	"1539.88230"	"0.87"	"0.00045"	"9/74"	"9"	"74"	"2889661.23626709"	"HCD"	"MS2"	"22.20862"	"90.4"	"100.000"	"51.1199"	"15296"	"15296"	"15266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.1"	""	"121.0"	""	"131.7"	""	"149.5"	"2.2"	"177.9"	"162.1"	""	"743"	"31"	"35.000"	"28.000"	"0.0279227905127763"	"18"	"0.0001889"	"0.000875"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSFTPPEK"	"[K].yLSFTPPEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"770.44562"	"1539.88396"	"1539.88230"	"1.08"	"0.00083"	"7/74"	"7"	"74"	"1081031.03820801"	"HCD"	"MS2"	"0"	"85.8"	"100.000"	"51.1176"	"15295"	"15295"	"15266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.2"	""	"110.6"	""	"106.9"	""	"145.8"	""	"167.9"	"167.8"	""	"744"	"41"	"35.000"	"28.000"	"0.00280894308691541"	"18"	"0.0001859"	"0.0003572"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIFDFNALK"	"[R].nIFDFNALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"770.44897"	"1539.89067"	"1539.89354"	"-1.86"	"-0.00143"	"12/80"	"12"	"80"	"623032.48223877"	"HCD"	"MS2"	"0"	"60.4"	"100.000"	"68.1080"	"22254"	"22254"	"22234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.5"	""	"67.1"	""	"83.3"	""	"88.2"	""	"105.0"	"132.3"	""	"699"	"33"	"35.000"	"28.000"	"0.0195185333060522"	"22"	"0.0001308"	"0.0002436"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIFDFNALK"	"[R].nIFDFNALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"770.44946"	"1539.89165"	"1539.89354"	"-1.22"	"-0.00094"	"8/80"	"8"	"80"	"4093030.28167725"	"HCD"	"MS2"	"0"	"326.9"	"100.000"	"67.7894"	"22124"	"22124"	"22106"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"538.3"	""	"417.0"	""	"449.1"	""	"490.5"	"2.9"	"473.1"	"722.2"	""	"690"	"54"	"35.000"	"28.000"	"0.000127884849014989"	""	"0.0001308"	"0.000219"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIFDFNALK"	"[R].nIFDFNALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"513.96881"	"1539.89188"	"1539.89354"	"-1.08"	"-0.00055"	"7/80"	"7"	"80"	"3272946.82513428"	"HCD"	"MS2"	"12.69674"	"92.7"	"100.000"	"68.0378"	"22174"	"22174"	"22154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.0"	""	"121.0"	""	"132.4"	""	"144.8"	"2.2"	"145.3"	"203.0"	""	"690"	"39"	"35.000"	"28.000"	"0.00463253911592563"	"25"	"0.0001889"	"0.0004682"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFNGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"513.96881"	"1539.89188"	"1539.89354"	"-1.08"	"-0.00055"	"7/76"	"7"	"76"	"5567145.88134766"	"HCD"	"MS2"	"13.51438"	"168.2"	"100.000"	"71.6367"	"23643"	"23643"	"23619"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.4"	""	"222.2"	""	"246.3"	""	"286.3"	"3.6"	"281.2"	"309.3"	""	"690"	"19"	"35.000"	"28.000"	"0.401623480146619"	"17"	"0.0001889"	"0.0006574"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFNGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5366"	"0.0000"	"1"	"1"	"1"	"770.44958"	"1539.89189"	"1539.89354"	"-1.07"	"-0.00082"	"14/76"	"14"	"76"	"7606435.81420898"	"HCD"	"MS2"	"0"	"449.8"	"69.346"	"71.8871"	"23746"	"23746"	"23731"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"719.3"	""	"607.5"	""	"662.0"	""	"712.7"	"4.1"	"755.0"	"795.0"	""	"690"	"41"	"35.000"	"28.000"	"0.00297727598979604"	""	"0.0001859"	"0.0003246"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFNGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.96887"	"1539.89206"	"1539.89354"	"-0.96"	"-0.00049"	"10/76"	"10"	"76"	"6566586.35577393"	"HCD"	"MS2"	"34.97252"	"182.9"	"100.000"	"71.5683"	"23667"	"23667"	"23642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.9"	""	"251.0"	""	"257.8"	""	"301.8"	""	"302.6"	"339.9"	""	"690"	"27"	"35.000"	"28.000"	"0.0636530319616918"	"14"	"0.0001889"	"0.0008166"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFNGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"770.44977"	"1539.89226"	"1539.89354"	"-0.83"	"-0.00064"	"14/76"	"14"	"76"	"4434455.70367432"	"HCD"	"MS2"	"20.67412"	"344.7"	"100.000"	"71.5543"	"23661"	"23661"	"23642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"551.9"	""	"461.6"	""	"489.0"	""	"580.9"	"5.6"	"562.7"	"608.8"	""	"688"	"41"	"35.000"	"28.000"	"0.00303779485743985"	"21"	"0.0001308"	"0.0002513"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFNGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"770.44977"	"1539.89226"	"1539.89354"	"-0.83"	"-0.00064"	"14/76"	"14"	"76"	"5522671.55548096"	"HCD"	"MS2"	"2.326389"	"449.7"	"100.000"	"71.8462"	"23780"	"23780"	"23769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"733.2"	""	"594.1"	""	"639.3"	""	"713.0"	"10.3"	"729.6"	"834.7"	""	"688"	"41"	"35.000"	"28.000"	"0.00293466439222051"	"23"	"0.0001308"	"0.0002735"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIFDFNALK"	"[R].nIFDFNALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"770.45007"	"1539.89287"	"1539.89354"	"-0.43"	"-0.00033"	"8/80"	"8"	"80"	"2704683.1595459"	"HCD"	"MS2"	"0"	"234.8"	"100.000"	"67.8782"	"22109"	"22109"	"22090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"386.9"	""	"296.6"	""	"317.1"	""	"358.7"	"0.6"	"340.8"	"521.3"	""	"674"	"56"	"35.000"	"28.000"	"8.2533431250168E-05"	""	"0"	"0.0001594"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIFDFNALK"	"[R].nIFDFNALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"0.5750"	"0.0000"	"1"	"1"	"1"	"513.96918"	"1539.89298"	"1539.89354"	"-0.36"	"-0.00019"	"7/80"	"7"	"80"	"3818974.4552002"	"HCD"	"MS2"	"47.22932"	"118.8"	"100.000"	"67.8356"	"22143"	"22143"	"22122"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.9"	""	"143.4"	""	"156.8"	""	"192.6"	"0.5"	"178.9"	"268.3"	""	"674"	"40"	"35.000"	"28.000"	"0.00367815393383231"	""	"0.0001859"	"0.0003355"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFNGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"770.45087"	"1539.89446"	"1539.89354"	"0.60"	"0.00046"	"14/76"	"14"	"76"	"2778097.31488037"	"HCD"	"MS2"	"30.24068"	"221.4"	"100.000"	"71.5975"	"23627"	"23627"	"23603"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.3"	""	"274.6"	""	"336.2"	""	"364.0"	"2.0"	"379.3"	"377.7"	""	"674"	"40"	"35.000"	"28.000"	"0.00317416794028198"	"23"	"0"	"0.0001779"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEYDTVTK"	"[R].lLEYDTVTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"770.45514"	"1539.90300"	"1539.90343"	"-0.28"	"-0.00021"	"13/74"	"13"	"74"	"626350.478027344"	"HCD"	"MS2"	"0"	"64.7"	"100.000"	"48.3160"	"14206"	"14206"	"14186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.5"	""	"92.0"	""	"94.7"	""	"101.2"	"0.1"	"107.1"	"117.6"	""	"657"	"41"	"35.000"	"28.000"	"0.00265176707436743"	"22"	"0"	"0.0001024"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLSTVLLDPTR"	"[R].vPLSTVLLDPTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"770.46869"	"1539.93010"	"1539.93076"	"-0.43"	"-0.00033"	"7/102"	"7"	"102"	"806938.644592285"	"HCD"	"MS2"	"18.3427"	"41.5"	"100.000"	"63.2975"	"20247"	"20247"	"20217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.0"	""	"49.7"	""	"62.3"	""	"67.1"	""	"77.6"	"80.7"	""	"448"	"34"	"33.000"	"26.000"	"0.00895876239464858"	"15"	"0"	"0.0001279"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLSTVLLDPTR"	"[R].vPLSTVLLDPTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"770.46912"	"1539.93096"	"1539.93076"	"0.13"	"0.00010"	"7/102"	"7"	"102"	"771904.674682617"	"HCD"	"MS2"	"11.66237"	"56.8"	"100.000"	"63.4665"	"20369"	"20369"	"20339"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.5"	""	"70.0"	""	"80.3"	""	"89.6"	"0.4"	"110.4"	"101.9"	""	"448"	"35"	"33.000"	"26.000"	"0.00668725706637622"	"15"	"0.00103"	"0.01163"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THILLFLPK"	"[K].tHILLFLPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"514.00513"	"1540.00083"	"1540.00269"	"-1.21"	"-0.00062"	"10/64"	"10"	"64"	"3815755.86669922"	"HCD"	"MS2"	"2.520452"	"96.5"	"100.000"	"55.8290"	"17200"	"17200"	"17179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.6"	""	"126.6"	""	"169.5"	""	"167.0"	""	"169.6"	"156.5"	""	"138"	"31"	"28.000"	"21.000"	"0.00524625131088725"	"15"	"0"	"0.0001275"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THILLFLPK"	"[K].tHILLFLPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.00543"	"1540.00174"	"1540.00269"	"-0.62"	"-0.00032"	"10/64"	"10"	"64"	"5384067.82110596"	"HCD"	"MS2"	"11.30311"	"123.5"	"100.000"	"55.9913"	"17320"	"17320"	"17301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.6"	""	"180.0"	""	"214.3"	""	"217.1"	""	"201.4"	"190.7"	""	"138"	"37"	"28.000"	"21.000"	"0.00125848803460055"	"15"	"0.0001308"	"0.0002162"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THILLFLPK"	"[K].tHILLFLPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.00568"	"1540.00248"	"1540.00269"	"-0.14"	"-0.00007"	"10/64"	"10"	"64"	"8038708.37591553"	"HCD"	"MS2"	"12.17678"	"163.2"	"100.000"	"55.6944"	"17199"	"17199"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.6"	""	"256.9"	""	"278.1"	""	"285.5"	"1.2"	"275.1"	"237.0"	""	"129"	"34"	"28.000"	"21.000"	"0.00253255983332742"	"15"	"0.0001308"	"0.0002224"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THILLFLPK"	"[K].tHILLFLPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.00580"	"1540.00284"	"1540.00269"	"0.10"	"0.00005"	"11/64"	"11"	"64"	"8778892.42077637"	"HCD"	"MS2"	"12.81964"	"169.8"	"100.000"	"55.5229"	"17075"	"17075"	"17051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"207.8"	""	"256.5"	""	"284.5"	""	"313.5"	""	"281.1"	"263.2"	""	"129"	"39"	"28.000"	"21.000"	"0.000804562366686699"	"15"	"0"	"0.0001499"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSHWDHITR"	"[K].fLSHWDHITR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"4"	"4"	"0.7838"	"0.0000"	"1"	"1"	"1"	"385.96072"	"1540.82107"	"1540.82221"	"-0.74"	"-0.00029"	"11/84"	"11"	"84"	"14944337.7819214"	"HCD"	"MS2"	"1.387062"	"196.1"	"100.000"	"37.5548"	"9817"	"9817"	"9793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.4"	""	"222.1"	""	"342.9"	""	"366.4"	"4.1"	"318.4"	"404.8"	""	"872"	"37"	"36.000"	"29.000"	"0.00823164228205983"	"23"	"0.0001889"	"0.000541"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSHWDHITR"	"[K].fLSHWDHITR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"4"	"4"	"0.8056"	"0.0000"	"1"	"1"	"1"	"385.96082"	"1540.82143"	"1540.82221"	"-0.51"	"-0.00020"	"11/84"	"11"	"84"	"15003186.6918335"	"HCD"	"MS2"	"2.990935"	"206.4"	"98.422"	"37.4478"	"9730"	"9730"	"9704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"213.6"	""	"230.1"	""	"387.6"	""	"375.8"	"4.9"	"330.1"	"412.3"	""	"871"	"36"	"36.000"	"29.000"	"0.0101155187481352"	"22"	"0.0001889"	"0.0006496"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVFDTDLK"	"[K].mNVFDTDLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"770.92480"	"1540.84233"	"1540.84454"	"-1.43"	"-0.00110"	"6/82"	"6"	"82"	"1143177.38812256"	"HCD"	"MS2"	"50.61135"	"114.3"	"100.000"	"54.6496"	"16718"	"16718"	"16688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.7"	""	"133.9"	""	"138.1"	""	"166.6"	""	"241.0"	"271.4"	""	"856"	"24"	"36.000"	"29.000"	"0.15611468928416"	"28"	"0"	"0.0001582"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVFDTDLK"	"[K].mNVFDTDLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"770.92480"	"1540.84233"	"1540.84454"	"-1.43"	"-0.00110"	"6/82"	"6"	"82"	"1129297.93572998"	"HCD"	"MS2"	"30.652"	"113.4"	"100.000"	"54.8467"	"16852"	"16852"	"16821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.1"	""	"121.6"	""	"137.2"	""	"160.9"	"5.0"	"261.4"	"266.9"	""	"856"	"24"	"36.000"	"29.000"	"0.174358758900161"	"24"	"0"	"0.000133"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"514.29541"	"1540.87168"	"1540.87755"	"-3.81"	"-0.00196"	"9/76"	"9"	"76"	"11953967.3756104"	"HCD"	"MS2"	"20.60161"	"301.8"	"100.000"	"71.9612"	"23827"	"23827"	"23807"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"416.6"	""	"341.6"	""	"357.2"	""	"538.6"	"1.3"	"615.1"	"593.9"	""	"819"	"29"	"36.000"	"29.000"	"0.0563967277512071"	"16"	"0.0001859"	"0.0003607"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"770.93988"	"1540.87248"	"1540.87755"	"-3.29"	"-0.00253"	"14/76"	"14"	"76"	"9661993.96069336"	"HCD"	"MS2"	"0"	"709.9"	"100.000"	"72.0042"	"23794"	"23794"	"23777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1029.2"	""	"767.3"	""	"828.3"	""	"1285.0"	"3.2"	"1375.6"	"1446.0"	""	"810"	"42"	"36.000"	"29.000"	"0.00275711590270965"	"22"	"0.0001859"	"0.0003178"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5250"	"0.0000"	"1"	"1"	"1"	"770.94000"	"1540.87273"	"1540.87755"	"-3.13"	"-0.00241"	"14/76"	"14"	"76"	"9256347.26647949"	"HCD"	"MS2"	"2.632354"	"697.2"	"100.000"	"71.9563"	"23825"	"23825"	"23807"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"999.5"	""	"730.4"	""	"812.0"	""	"1263.2"	""	"1377.7"	"1434.3"	""	"814"	"40"	"36.000"	"29.000"	"0.00421302861838492"	"23"	"0.0001859"	"0.0003193"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"514.29614"	"1540.87387"	"1540.87755"	"-2.39"	"-0.00123"	"8/76"	"8"	"76"	"11441360.2471924"	"HCD"	"MS2"	"15.32501"	"298.1"	"100.000"	"72.0087"	"23795"	"23795"	"23777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"419.1"	""	"317.9"	""	"336.2"	""	"553.2"	""	"594.4"	"608.6"	""	"785"	"28"	"35.000"	"28.000"	"0.06805180691185"	"17"	"0.0001889"	"0.000391"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFSQETVMK"	"[K].lFSQETVMk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"770.94080"	"1540.87432"	"1540.88092"	"-4.29"	"-0.00330"	"8/80"	"8"	"80"	"1755441.63928223"	"HCD"	"MS2"	"0"	"168.7"	"100.000"	"48.2728"	"14141"	"14141"	"14112"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"263.8"	""	"247.1"	""	"242.6"	""	"195.0"	""	"310.1"	"344.0"	""	"782"	"32"	"35.000"	"28.000"	"0.0246704321691756"	"15"	"0.0001308"	"0.0002736"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"770.94122"	"1540.87517"	"1540.87755"	"-1.55"	"-0.00119"	"8/76"	"8"	"76"	"698237.751953125"	"HCD"	"MS2"	"6.402912"	"63.1"	"100.000"	"72.5856"	"24082"	"24082"	"24063"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.8"	""	"78.2"	""	"79.5"	""	"109.7"	""	"117.4"	"123.4"	""	"787"	"51"	"35.000"	"28.000"	"0.000345895360372953"	"16"	"0"	"5.152E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"770.94141"	"1540.87554"	"1540.87755"	"-1.31"	"-0.00101"	"14/76"	"14"	"76"	"1248669.06671143"	"HCD"	"MS2"	"25.6261"	"96.9"	"100.000"	"74.5893"	"24900"	"24900"	"24879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.8"	""	"116.4"	""	"135.2"	""	"174.6"	""	"177.6"	"178.2"	""	"777"	"40"	"35.000"	"28.000"	"0.00347849211416018"	"19"	"0"	"0.0001159"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"514.29675"	"1540.87571"	"1540.87755"	"-1.20"	"-0.00062"	"8/76"	"8"	"76"	"3123579.94293213"	"HCD"	"MS2"	"1.788133"	"89.5"	"100.000"	"72.2697"	"23953"	"23953"	"23935"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.1"	""	"92.8"	""	"106.6"	""	"161.5"	""	"169.2"	"195.8"	""	"777"	"28"	"35.000"	"28.000"	"0.0676691970312642"	"15"	"0.0002277"	"0.00117"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"514.29681"	"1540.87589"	"1540.87755"	"-1.08"	"-0.00055"	"8/76"	"8"	"76"	"2817786.18780518"	"HCD"	"MS2"	"2.727812"	"79.6"	"100.000"	"72.3270"	"23925"	"23925"	"23905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.0"	""	"92.3"	""	"95.1"	""	"146.6"	""	"158.8"	"160.7"	""	"775"	"29"	"35.000"	"28.000"	"0.0491215098019915"	"15"	"0.0002277"	"0.001186"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.5238"	"0.0000"	"1"	"1"	"1"	"514.29694"	"1540.87625"	"1540.87755"	"-0.84"	"-0.00043"	"9/76"	"9"	"76"	"1596276.61914063"	"HCD"	"MS2"	"0"	"51.9"	"100.000"	"74.6677"	"24932"	"24932"	"24911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.5"	""	"60.9"	""	"64.9"	""	"84.3"	""	"101.4"	"113.1"	""	"775"	"21"	"35.000"	"28.000"	"0.291253871432055"	"14"	"0.0004166"	"0.002447"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"514.29700"	"1540.87644"	"1540.87755"	"-0.72"	"-0.00037"	"8/76"	"8"	"76"	"4986910.93688965"	"HCD"	"MS2"	"8.230721"	"129.9"	"100.000"	"74.9836"	"25061"	"25061"	"25039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.9"	""	"172.1"	""	"169.1"	""	"229.2"	""	"234.9"	"259.5"	""	"776"	"25"	"35.000"	"28.000"	"0.117444241010331"	"14"	"0.0002277"	"0.001134"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5122"	"0.0000"	"1"	"1"	"1"	"770.94189"	"1540.87651"	"1540.87755"	"-0.67"	"-0.00052"	"8/76"	"8"	"76"	"2651005.40698242"	"HCD"	"MS2"	"0"	"209.5"	"100.000"	"72.2652"	"23952"	"23952"	"23935"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.0"	""	"227.5"	""	"257.1"	""	"369.6"	"3.9"	"420.7"	"422.5"	""	"776"	"41"	"35.000"	"28.000"	"0.00339493704788245"	"24"	"0"	"0.0001598"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"514.29718"	"1540.87699"	"1540.87755"	"-0.37"	"-0.00019"	"9/76"	"9"	"76"	"5762828.48175049"	"HCD"	"MS2"	"36.89987"	"105.9"	"100.000"	"75.0764"	"25047"	"25047"	"25025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.9"	""	"113.3"	""	"121.6"	""	"175.7"	""	"213.8"	"250.6"	""	"772"	"11"	"35.000"	"28.000"	"2.79632280588946"	"14"	"0.00103"	"0.01138"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"770.94220"	"1540.87712"	"1540.87755"	"-0.28"	"-0.00021"	"8/76"	"8"	"76"	"2379849.25073242"	"HCD"	"MS2"	"1.199977"	"193.8"	"100.000"	"72.3219"	"23923"	"23923"	"23905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"273.6"	""	"206.1"	""	"232.6"	""	"343.6"	"0.8"	"379.2"	"403.3"	""	"766"	"54"	"35.000"	"28.000"	"0.000151425415486093"	"22"	"0"	"6.816E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"514.29730"	"1540.87735"	"1540.87755"	"-0.13"	"-0.00007"	"10/76"	"10"	"76"	"2406223.20758057"	"HCD"	"MS2"	"7.981782"	"77.7"	"100.000"	"74.7602"	"24918"	"24918"	"24897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.1"	""	"92.7"	""	"105.8"	""	"123.8"	"0.0"	"151.0"	"156.2"	""	"766"	"36"	"35.000"	"28.000"	"0.0100739264089593"	"15"	"0.0001308"	"0.0002631"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"770.94232"	"1540.87737"	"1540.87755"	"-0.12"	"-0.00009"	"14/76"	"14"	"76"	"7428842.47509766"	"HCD"	"MS2"	"5.732145"	"580.3"	"100.000"	"74.9056"	"24978"	"24978"	"24961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"799.1"	""	"704.4"	""	"754.1"	""	"1001.7"	"5.5"	"1133.8"	"1104.7"	""	"766"	"39"	"35.000"	"28.000"	"0.00465799238247559"	"22"	"0.0001859"	"0.0003193"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"770.94244"	"1540.87761"	"1540.87755"	"0.04"	"0.00003"	"14/76"	"14"	"76"	"7196760.19073486"	"HCD"	"MS2"	"9.814264"	"534.8"	"100.000"	"74.8914"	"25024"	"25024"	"25007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"740.9"	""	"641.3"	""	"709.1"	""	"906.4"	"4.5"	"1006.0"	"1063.0"	""	"760"	"39"	"35.000"	"28.000"	"0.00456860485154617"	"22"	"0.0001308"	"0.0002258"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFSQETVMK"	"[K].lFSQETVMk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"770.94269"	"1540.87810"	"1540.88092"	"-1.83"	"-0.00141"	"8/80"	"8"	"80"	"2265739.37957764"	"HCD"	"MS2"	"15.01834"	"217.1"	"100.000"	"48.6212"	"14331"	"14331"	"14303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"377.5"	""	"334.8"	""	"331.5"	""	"217.9"	"10.4"	"359.8"	"422.3"	""	"760"	"35"	"35.000"	"28.000"	"0.011009905633265"	"20"	"0"	"0.0001644"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQDFFNGK"	"[K].lLQDFFnGk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"770.94330"	"1540.87932"	"1540.87755"	"1.15"	"0.00088"	"7/76"	"7"	"76"	"1214499.85925293"	"HCD"	"MS2"	"30.24422"	"101.5"	"100.000"	"74.6080"	"24856"	"24856"	"24833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.7"	""	"119.4"	""	"127.8"	""	"178.4"	"2.2"	"190.7"	"187.8"	""	"752"	"37"	"35.000"	"28.000"	"0.00700144763385239"	"21"	"0"	"0.0001374"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGHAGAIIAGGK"	"[R].mGHAGAIIAGGk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.30518"	"1540.90097"	"1540.90339"	"-1.57"	"-0.00080"	"12/90"	"12"	"90"	"4333798.13391113"	"HCD"	"MS2"	"0"	"190.0"	"100.000"	"32.6940"	"7792"	"7792"	"7768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.0"	""	"261.2"	""	"261.0"	""	"261.4"	"5.0"	"360.7"	"340.5"	""	"651"	"26"	"35.000"	"28.000"	"0.0810123057100919"	"14"	"0"	"4.151E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FASFIDKVR"	"[K].fASFIDkVR.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"4"	"10"	"Q6IG05; Q6IG01; Q6IG12; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2;Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG04; Q6IG05; Q6P6Q2; Q6IG01; Q6IMF3; Q6IG12; Q4FZU2; Q6IG00; Q10758; Q6IG03"	"Keratin, type II cytoskeletal 72 OS=Rattus norvegicus OX=10116 GN=Krt72 PE=3 SV=2; Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1; Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1; Keratin, type II cytoskeletal 4 OS=Rattus norvegicus OX=10116 GN=Krt4 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3; Keratin, type II cytoskeletal 73 OS=Rattus norvegicus OX=10116 GN=Krt73 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.31281"	"1540.92386"	"1540.92517"	"-0.85"	"-0.00044"	"13/74"	"13"	"74"	"3503309.73626709"	"HCD"	"MS2"	"54.3197"	"164.8"	"100.000"	"50.4179"	"15059"	"15059"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"311.7"	""	"242.7"	""	"285.2"	""	"218.8"	""	"230.5"	"267.0"	""	"520"	"9"	"34.000"	"27.000"	"3.0337050043585"	"13"	"0.0001889"	"0.0004809"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQHSLLK"	"[R].kQHSLLk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62845"	"40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2"	"P62845"	"40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"386.00848"	"1541.01211"	"1541.01421"	"-1.36"	"-0.00053"	"6/60"	"6"	"60"	"11384349.0671387"	"HCD"	"MS2"	"14.37022"	"306.1"	"50.498"	"26.1726"	"5210"	"5210"	"5192"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"458.6"	""	"440.5"	""	"491.3"	""	"522.5"	"9.2"	"551.2"	"421.6"	""	"122"	"7"	"27.000"	"20.000"	"1.11514113184707"	"13"	"0.00103"	"0.01288"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQHSLLK"	"[R].kQHSLLk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62845"	"40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2"	"P62845"	"40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.34283"	"1541.01395"	"1541.01421"	"-0.17"	"-0.00009"	"6/60"	"6"	"60"	"3608185.47784424"	"HCD"	"MS2"	"54.51178"	"234.0"	"100.000"	"26.0695"	"5169"	"5169"	"5149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.6"	""	"330.5"	""	"400.3"	""	"415.2"	""	"407.6"	"303.2"	""	"103"	"4"	"27.000"	"20.000"	"2.24805653603685"	"13"	"0.000523"	"0.003168"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQHSLLK"	"[R].kQHSLLk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62845"	"40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2"	"P62845"	"40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.34351"	"1541.01596"	"1541.01421"	"1.14"	"0.00059"	"12/60"	"12"	"60"	"5833862.90374756"	"HCD"	"MS2"	"0"	"346.4"	"100.000"	"25.9998"	"5104"	"5104"	"5089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"541.1"	""	"498.3"	""	"586.9"	""	"595.6"	""	"624.0"	"428.3"	""	"96"	"13"	"26.000"	"19.000"	"0.231334942860061"	"13"	"0.0003839"	"0.001595"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWDDFFPGSDR"	"[R].aWDDFFPGSDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"771.36359"	"1541.71990"	"1541.72222"	"-1.51"	"-0.00116"	"7/94"	"7"	"94"	"1199995.78649902"	"HCD"	"MS2"	"41.42152"	"77.6"	"100.000"	"62.5545"	"19996"	"19996"	"19971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.0"	""	"100.4"	"2.5"	"103.6"	""	"130.6"	""	"140.8"	"166.7"	""	"394"	"22"	"32.000"	"25.000"	"0.123727496686224"	"16"	"0.0001889"	"0.0006107"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWDDFFPGSDR"	"[R].aWDDFFPGSDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"771.36493"	"1541.72258"	"1541.72222"	"0.23"	"0.00018"	"7/94"	"7"	"94"	"1146728.4977417"	"HCD"	"MS2"	"45.94502"	"80.5"	"100.000"	"62.4315"	"19893"	"19893"	"19865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.7"	""	"97.3"	""	"100.9"	""	"130.3"	"0.4"	"164.4"	"167.1"	""	"406"	"35"	"33.000"	"26.000"	"0.00676855617909366"	"16"	"0"	"0.0001246"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVPANVPYIR"	"[K].fHVPANVPYIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.63062"	"1541.87729"	"1541.87900"	"-1.11"	"-0.00057"	"7/92"	"7"	"92"	"10852003.9708862"	"HCD"	"MS2"	"31.322"	"203.0"	"100.000"	"44.9171"	"12821"	"12821"	"12799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.8"	""	"261.1"	""	"282.4"	""	"326.6"	"5.1"	"378.5"	"379.6"	""	"717"	"20"	"35.000"	"28.000"	"0.400395474329331"	"14"	"0"	"0.000181"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVPANVPYIR"	"[K].fHVPANVPYIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"514.63080"	"1541.87784"	"1541.87900"	"-0.75"	"-0.00039"	"7/92"	"7"	"92"	"32910593.842041"	"HCD"	"MS2"	"30.6623"	"190.3"	"39.182"	"45.2137"	"12942"	"12942"	"12923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"249.5"	""	"276.5"	""	"268.3"	""	"331.6"	""	"338.7"	"338.4"	""	"711"	"23"	"35.000"	"28.000"	"0.186139955206234"	"17"	"0.0001859"	"0.0003722"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVPANVPYIR"	"[K].fHVPANVPYIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.63092"	"1541.87821"	"1541.87900"	"-0.51"	"-0.00026"	"8/92"	"8"	"92"	"11996635.1464233"	"HCD"	"MS2"	"29.06612"	"195.0"	"100.000"	"44.6830"	"12676"	"12676"	"12657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.9"	"2.5"	"241.7"	""	"270.9"	""	"326.3"	"7.1"	"365.9"	"364.5"	""	"711"	"25"	"35.000"	"28.000"	"0.121573691813624"	"14"	"0"	"0.0001039"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVPANVPYIR"	"[K].fHVPANVPYIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"514.63123"	"1541.87912"	"1541.87900"	"0.08"	"0.00004"	"8/92"	"8"	"92"	"28869826.2414551"	"HCD"	"MS2"	"40.88971"	"200.9"	"39.477"	"44.9910"	"12802"	"12802"	"12784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"268.7"	""	"278.7"	""	"286.0"	""	"356.4"	"3.1"	"365.2"	"344.3"	""	"724"	"19"	"35.000"	"28.000"	"0.426293362414533"	"16"	"0.0001889"	"0.0006356"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQAIELEDLLR"	"[K].iQAIELEDLLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"2"	"2"	"0.7042"	"0.0000"	"1"	"1"	"1"	"771.45709"	"1541.90691"	"1541.91002"	"-2.02"	"-0.00156"	"9/104"	"9"	"104"	"1247270.09332275"	"HCD"	"MS2"	"17.88906"	"58.7"	"100.000"	"75.7289"	"25365"	"25365"	"25343"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.1"	""	"32.6"	""	"39.4"	""	"146.3"	"1.4"	"157.8"	"154.9"	""	"596"	"71"	"34.000"	"27.000"	"2.52473769413898E-06"	""	"0"	"1.029E-05"	"1.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQGVNLYVK"	"[R].yQGVNLYVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"771.45740"	"1541.90752"	"1541.90919"	"-1.08"	"-0.00083"	"16/80"	"16"	"80"	"5499450.26916504"	"HCD"	"MS2"	"15.46172"	"413.2"	"100.000"	"45.0599"	"12879"	"12879"	"12859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"678.4"	""	"605.5"	""	"600.9"	""	"579.1"	"3.9"	"706.7"	"735.2"	""	"587"	"53"	"34.000"	"27.000"	"0.000140477932096694"	""	"0"	"0.0001497"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQAIELEDLLR"	"[K].iQAIELEDLLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"771.45764"	"1541.90801"	"1541.91002"	"-1.31"	"-0.00101"	"10/104"	"10"	"104"	"1211101.34814453"	"HCD"	"MS2"	"18.85949"	"59.9"	"100.000"	"75.7597"	"25326"	"25326"	"25297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.3"	""	"33.1"	""	"27.8"	""	"151.1"	""	"161.4"	"178.8"	""	"587"	"57"	"34.000"	"27.000"	"5.85609489443366E-05"	""	"0"	"1.014E-05"	"1.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQAIELEDLLR"	"[K].iQAIELEDLLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"3"	"3"	"0.5116"	"0.0000"	"1"	"1"	"1"	"514.64105"	"1541.90860"	"1541.91002"	"-0.92"	"-0.00047"	"12/104"	"12"	"104"	"773870.424499512"	"HCD"	"MS2"	"30.39507"	"11.7"	"100.000"	"75.8650"	"25421"	"25421"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"13.3"	""	"15.8"	""	"20.5"	""	"28.4"	"24.6"	""	"576"	"43"	"34.000"	"27.000"	"0.00133472712884051"	""	"0"	"0.0001325"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQGVNLYVK"	"[R].yQGVNLYVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"771.45795"	"1541.90862"	"1541.90919"	"-0.37"	"-0.00028"	"16/80"	"16"	"80"	"4957519.55834961"	"HCD"	"MS2"	"0"	"380.9"	"100.000"	"44.8093"	"12728"	"12728"	"12704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"634.2"	""	"555.8"	""	"563.4"	""	"526.0"	"1.3"	"647.6"	"675.5"	""	"576"	"51"	"34.000"	"27.000"	"0.000219478754887319"	"23"	"0.0001308"	"0.0002449"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IQAIELEDLLR"	"[K].iQAIELEDLLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"2"	"2"	"0.0455"	"0.0000"	"1"	"1"	"1"	"771.45844"	"1541.90959"	"1541.91002"	"-0.28"	"-0.00022"	"5/104"	"5"	"104"	"388442.397277832"	"HCD"	"MS2"	"15.14169"	"30.1"	"100.000"	"76.0508"	"25492"	"25492"	"25471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.1"	""	"31.6"	""	"31.7"	""	"63.9"	""	"67.6"	"64.3"	""	"563"	"22"	"34.000"	"27.000"	"0.185985205614138"	"20"	"0.0001889"	"0.0004516"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQAIELEDLLR"	"[K].iQAIELEDLLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"771.45868"	"1541.91008"	"1541.91002"	"0.04"	"0.00003"	"8/104"	"8"	"104"	"421298.905334473"	"HCD"	"MS2"	"10.92314"	"28.1"	"100.000"	"76.0532"	"25445"	"25445"	"25425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.2"	""	"22.2"	""	"26.3"	""	"59.7"	"0.3"	"66.6"	"68.8"	""	"562"	"26"	"34.000"	"27.000"	"0.0670974970498602"	"21"	"0.0006396"	"0.006373"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVMVHQLSK"	"[K].aAVMVHQLSk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"514.64569"	"1541.92252"	"1541.92379"	"-0.82"	"-0.00042"	"7/78"	"7"	"78"	"9189238.99884033"	"HCD"	"MS2"	"19.26753"	"293.0"	"76.570"	"34.7330"	"8659"	"8659"	"8634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.8"	""	"462.4"	""	"409.7"	""	"352.7"	"3.1"	"559.6"	"561.2"	""	"517"	"35"	"34.000"	"27.000"	"0.00873897601592463"	"21"	"0"	"0.0001634"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVMVHQLSK"	"[K].aAVMVHQLSk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"514.64581"	"1541.92289"	"1541.92379"	"-0.59"	"-0.00030"	"13/78"	"13"	"78"	"9472279.56542969"	"HCD"	"MS2"	"25.85058"	"315.5"	"80.648"	"34.6757"	"8592"	"8592"	"8574"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"432.6"	""	"501.2"	""	"446.6"	""	"407.0"	"3.5"	"605.2"	"594.0"	""	"517"	"46"	"34.000"	"27.000"	"0.000667514259279043"	"25"	"0"	"6.966E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDGVLLLQALTR"	"[R].nDGVLLLQALTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.8657"	"0.0000"	"1"	"1"	"1"	"771.46582"	"1541.92436"	"1541.92126"	"2.01"	"0.00155"	"10/128"	"10"	"128"	"1517395.18658447"	"HCD"	"MS2"	"31.12694"	"77.1"	"100.000"	"70.5866"	"23266"	"23266"	"23242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.8"	""	"95.1"	"2.2"	"99.8"	""	"132.4"	"0.4"	"145.4"	"150.1"	""	"508"	"67"	"34.000"	"27.000"	"5.2339999797058E-06"	"26"	"0"	"4.802E-06"	"1.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDGVLLLQALTR"	"[R].nDGVLLLQALTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"771.46649"	"1541.92571"	"1541.92126"	"2.89"	"0.00222"	"8/128"	"8"	"128"	"1082636.13201904"	"HCD"	"MS2"	"53.85445"	"66.9"	"100.000"	"70.6249"	"23230"	"23230"	"23203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.5"	""	"85.8"	""	"92.2"	""	"124.3"	""	"117.3"	"129.5"	""	"492"	"48"	"33.000"	"26.000"	"0.000386309249866054"	"21"	"0"	"9.284E-06"	"1.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KHNFTPLAR"	"[K].kHNFTPLAR.[V]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.64789"	"1541.92911"	"1541.93165"	"-1.65"	"-0.00085"	"14/80"	"14"	"80"	"4836746.76983643"	"HCD"	"MS2"	"10.42561"	"217.9"	"100.000"	"26.6087"	"5388"	"5388"	"5365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"424.4"	""	"290.2"	"3.4"	"315.3"	""	"342.9"	"0.5"	"352.3"	"329.7"	""	"494"	"10"	"33.000"	"26.000"	"2.64056555167997"	"13"	"0.0001308"	"0.0002595"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KHNFTPLAR"	"[K].kHNFTPLAR.[V]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.64856"	"1541.93113"	"1541.93165"	"-0.34"	"-0.00018"	"7/80"	"7"	"80"	"5392211.36035156"	"HCD"	"MS2"	"0"	"240.0"	"100.000"	"26.5204"	"5315"	"5315"	"5297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"457.8"	""	"343.0"	""	"347.5"	""	"363.1"	"0.2"	"407.4"	"348.0"	""	"464"	"10"	"33.000"	"26.000"	"2.32"	"13"	"0.0001308"	"0.0002407"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSFELLHK"	"[K].lPSFELLHk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"514.65295"	"1541.94431"	"1541.94557"	"-0.82"	"-0.00042"	"6/68"	"6"	"68"	"7591954.61791992"	"HCD"	"MS2"	"16.57236"	"208.7"	"100.000"	"54.8306"	"16845"	"16845"	"16821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.6"	""	"279.0"	""	"289.7"	""	"337.1"	"2.0"	"380.7"	"409.9"	""	"388"	"28"	"32.000"	"25.000"	"0.0296347815298186"	"15"	"0"	"8.255E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSFELLHK"	"[K].lPSFELLHk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7027"	"0.0000"	"1"	"1"	"1"	"514.65338"	"1541.94559"	"1541.94557"	"0.01"	"0.00001"	"11/68"	"11"	"68"	"8900189.23339844"	"HCD"	"MS2"	"11.85918"	"220.8"	"100.000"	"54.6704"	"16726"	"16726"	"16704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"294.1"	""	"304.5"	""	"303.2"	""	"362.2"	"2.3"	"395.7"	"430.6"	""	"382"	"37"	"32.000"	"25.000"	"0.00390870925614413"	""	"0"	"3.321E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSFELLHK"	"[K].lPSFELLHk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"514.65369"	"1541.94651"	"1541.94557"	"0.61"	"0.00031"	"6/68"	"6"	"68"	"1350147.56817627"	"HCD"	"MS2"	"44.46902"	"52.3"	"100.000"	"55.1521"	"16977"	"16977"	"16949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.4"	""	"62.7"	""	"85.7"	""	"84.8"	""	"95.5"	"94.9"	""	"380"	"28"	"32.000"	"25.000"	"0.0279739375462217"	"24"	"0.0001889"	"0.001045"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLIAGSPLK"	"[K].aLTLIAGSPLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.9848"	"0.0000"	"1"	"1"	"1"	"771.50378"	"1542.00029"	"1542.00309"	"-1.81"	"-0.00140"	"9/90"	"9"	"90"	"4361679.77307129"	"HCD"	"MS2"	"26.10027"	"282.1"	"100.000"	"59.7287"	"18842"	"18842"	"18821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.4"	""	"387.3"	""	"426.4"	""	"447.5"	""	"493.0"	"523.2"	""	"151"	"66"	"28.000"	"21.000"	"1.83209062178722E-06"	"18"	"0"	"9.193E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLIAGSPLK"	"[K].aLTLIAGSPLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"514.67242"	"1542.00272"	"1542.00309"	"-0.24"	"-0.00012"	"12/90"	"12"	"90"	"7663337.08258057"	"HCD"	"MS2"	"0"	"178.7"	"100.000"	"59.5723"	"18725"	"18725"	"18697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.4"	""	"259.9"	""	"281.2"	""	"288.7"	"0.5"	"297.9"	"305.2"	""	"147"	"42"	"28.000"	"21.000"	"0.000476746308657955"	"19"	"0"	"5.393E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLIAGSPLK"	"[K].aLTLIAGSPLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"514.67279"	"1542.00382"	"1542.00309"	"0.48"	"0.00024"	"12/90"	"12"	"90"	"8259663.47406006"	"HCD"	"MS2"	"9.496811"	"190.8"	"100.000"	"59.7631"	"18856"	"18856"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"273.5"	""	"282.0"	""	"293.8"	""	"297.4"	"1.7"	"325.0"	"332.1"	""	"155"	"41"	"28.000"	"21.000"	"0.000664204330053536"	""	"0"	"3.673E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTLIAGSPLK"	"[K].aLTLIAGSPLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"771.50616"	"1542.00505"	"1542.00309"	"1.28"	"0.00098"	"16/90"	"16"	"90"	"4523773.7154541"	"HCD"	"MS2"	"27.24419"	"288.4"	"100.000"	"59.5932"	"18733"	"18733"	"18713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"404.0"	""	"378.2"	""	"429.0"	""	"459.5"	""	"524.0"	"545.8"	""	"154"	"60"	"28.000"	"21.000"	"7.68229049143366E-06"	"17"	"0"	"5.094E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEELNMDLFR"	"[K].fEELNMDLFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"771.89398"	"1542.78069"	"1542.78238"	"-1.10"	"-0.00085"	"8/92"	"8"	"92"	"1880674.83703613"	"HCD"	"MS2"	"35.46817"	"138.3"	"100.000"	"72.3942"	"24004"	"24004"	"23983"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.9"	""	"164.5"	""	"199.1"	""	"202.1"	""	"280.9"	"300.1"	""	"677"	"33"	"35.000"	"28.000"	"0.0154368496049514"	"20"	"0"	"8.449E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEELNMDLFR"	"[K].fEELNMDLFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"771.89532"	"1542.78337"	"1542.78238"	"0.64"	"0.00050"	"8/92"	"8"	"92"	"1774897.89935303"	"HCD"	"MS2"	"29.73314"	"132.2"	"100.000"	"72.4417"	"23972"	"23972"	"23953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.7"	""	"155.4"	""	"177.0"	""	"191.0"	""	"277.3"	"297.1"	""	"678"	"36"	"35.000"	"28.000"	"0.00835987335322441"	"22"	"0"	"4.793E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGIYDIDNK"	"[R].fGIYDIDNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"514.95526"	"1542.85123"	"1542.85682"	"-3.62"	"-0.00186"	"7/70"	"7"	"70"	"7058585.41479492"	"HCD"	"MS2"	"24.97734"	"217.1"	"100.000"	"54.2633"	"16560"	"16560"	"16541"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.2"	""	"262.1"	""	"279.4"	""	"372.3"	"1.4"	"395.4"	"439.2"	""	"843"	"37"	"36.000"	"29.000"	"0.00913687280181501"	"20"	"0.000523"	"0.002763"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGIYDIDNK"	"[R].fGIYDIDNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"771.93036"	"1542.85344"	"1542.85682"	"-2.19"	"-0.00169"	"8/70"	"8"	"70"	"4492954.331604"	"HCD"	"MS2"	"0"	"408.7"	"100.000"	"54.2565"	"16557"	"16557"	"16541"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"593.0"	""	"496.9"	""	"537.5"	""	"657.8"	"5.7"	"685.6"	"896.4"	""	"851"	"36"	"36.000"	"29.000"	"0.0108867829487835"	"19"	"0.0001859"	"0.0003691"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGIYDIDNK"	"[R].fGIYDIDNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"514.95642"	"1542.85471"	"1542.85682"	"-1.36"	"-0.00070"	"7/70"	"7"	"70"	"7407262.63110352"	"HCD"	"MS2"	"5.764413"	"229.2"	"100.000"	"54.4741"	"16699"	"16699"	"16680"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"340.4"	""	"271.5"	""	"301.6"	""	"387.7"	""	"394.6"	"475.8"	""	"828"	"35"	"36.000"	"29.000"	"0.0119398904229441"	"20"	"0.0003839"	"0.001894"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGIYDIDNK"	"[R].fGIYDIDNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"771.93317"	"1542.85906"	"1542.85682"	"1.45"	"0.00112"	"8/70"	"8"	"70"	"4448711.05963135"	"HCD"	"MS2"	"9.69139"	"407.3"	"100.000"	"54.4352"	"16683"	"16683"	"16667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"609.7"	""	"476.1"	""	"513.3"	""	"693.3"	"2.4"	"671.6"	"892.8"	""	"794"	"36"	"35.000"	"28.000"	"0.0102752052731578"	"19"	"0.0001308"	"0.0002161"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSQYLDSLK"	"[K].mSQYLDSLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5EB81"	"NADH-cytochrome b5 reductase 1 OS=Rattus norvegicus OX=10116 GN=Cyb5r1 PE=2 SV=1"	"Q5EB81"	"NADH-cytochrome b5 reductase 1 OS=Rattus norvegicus OX=10116 GN=Cyb5r1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.93774"	"1542.86821"	"1542.86019"	"5.20"	"0.00401"	"8/86"	"8"	"86"	"1865964.27288818"	"HCD"	"MS2"	"0"	"152.6"	"100.000"	"53.6492"	"16313"	"16313"	"16301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"216.2"	""	"180.3"	""	"162.2"	""	"245.4"	"0.8"	"208.0"	"433.9"	""	"803"	"7"	"36.000"	"29.000"	"7.39069958589786"	"13"	"0.00103"	"0.01235"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGIYDIDNK"	"[R].fGIYDIDNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"514.96210"	"1542.87174"	"1542.85682"	"9.67"	"0.00497"	"7/70"	"7"	"70"	"6535912.9307251"	"HCD"	"MS2"	"15.71805"	"204.7"	"100.000"	"54.1968"	"16533"	"16533"	"16509"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"292.4"	""	"259.5"	""	"269.1"	""	"332.0"	""	"333.4"	"454.3"	""	"808"	"35"	"36.000"	"29.000"	"0.0120609457804286"	"22"	"0.001422"	"0.01936"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGVSGYPTLK"	"[K].yGVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"771.94653"	"1542.88579"	"1542.89320"	"-4.80"	"-0.00371"	"9/80"	"9"	"80"	"2561622.03643799"	"HCD"	"MS2"	"0"	"225.6"	"100.000"	"43.1064"	"12038"	"12038"	"12027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"313.8"	""	"324.7"	""	"327.1"	""	"360.3"	""	"399.7"	"417.7"	""	"814"	"26"	"36.000"	"29.000"	"0.103655991280211"	"21"	"0"	"0.0001092"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGVSGYPTLK"	"[K].yGVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"771.94855"	"1542.88982"	"1542.89320"	"-2.19"	"-0.00169"	"9/80"	"9"	"80"	"3344318.19476318"	"HCD"	"MS2"	"0"	"268.6"	"100.000"	"43.3833"	"12197"	"12197"	"12185"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"417.8"	""	"377.4"	""	"398.1"	""	"376.8"	"2.1"	"472.5"	"498.0"	""	"773"	"49"	"35.000"	"28.000"	"0.00046254021535025"	"28"	"0"	"5.222E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGVSGYPTLK"	"[K].yGVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"514.96838"	"1542.89060"	"1542.89320"	"-1.69"	"-0.00087"	"11/80"	"11"	"80"	"10339623.2765503"	"HCD"	"MS2"	"8.061447"	"234.5"	"71.278"	"43.6604"	"12309"	"12309"	"12287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"337.4"	""	"314.8"	""	"325.3"	""	"335.7"	"3.2"	"457.1"	"449.4"	""	"778"	"34"	"35.000"	"28.000"	"0.0139299514032925"	"22"	"0.0001889"	"0.0007704"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGTYYPVTVK"	"[K].gGTYYPVTVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"771.94916"	"1542.89104"	"1542.89320"	"-1.40"	"-0.00108"	"8/82"	"8"	"82"	"680785.701049805"	"HCD"	"MS2"	"0"	"63.9"	"100.000"	"39.5513"	"10637"	"10637"	"10606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.5"	""	"88.6"	""	"106.9"	""	"79.9"	"0.0"	"99.2"	"123.1"	""	"747"	"37"	"35.000"	"28.000"	"0.00793031806557083"	"17"	"0.0003839"	"0.001772"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGVSGYPTLK"	"[K].yGVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"771.94922"	"1542.89116"	"1542.89320"	"-1.32"	"-0.00102"	"9/80"	"9"	"80"	"8268797.49298096"	"HCD"	"MS2"	"0"	"556.4"	"86.558"	"43.4195"	"12162"	"12162"	"12143"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"811.0"	""	"744.2"	""	"805.9"	""	"824.9"	"1.7"	"1002.6"	"1080.7"	""	"747"	"47"	"35.000"	"28.000"	"0.000728266958009631"	"20"	"0"	"9.191E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGVSGYPTLK"	"[K].yGVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"771.94934"	"1542.89141"	"1542.89320"	"-1.16"	"-0.00090"	"9/80"	"9"	"80"	"8457828.22454834"	"HCD"	"MS2"	"0"	"450.9"	"69.111"	"43.6856"	"12319"	"12319"	"12302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"678.5"	""	"586.6"	""	"654.4"	""	"663.7"	"3.9"	"815.6"	"868.0"	""	"747"	"48"	"35.000"	"28.000"	"0.000565315126290924"	"20"	"0"	"0.000104"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGVSGYPTLK"	"[K].yGVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.94965"	"1542.89202"	"1542.89320"	"-0.77"	"-0.00059"	"11/80"	"11"	"80"	"540543.21295166"	"HCD"	"MS2"	"100"	"55.6"	"100.000"	"43.9948"	"12446"	"12446"	"12416"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.5"	""	"74.3"	""	"82.4"	""	"88.5"	""	"104.2"	"102.6"	""	"750"	"26"	"35.000"	"28.000"	"0.100468812180714"	"14"	"0.0001889"	"0.0004283"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGTYYPVTVK"	"[K].gGTYYPVTVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"771.95038"	"1542.89348"	"1542.89320"	"0.18"	"0.00014"	"9/82"	"9"	"82"	"667709.073120117"	"HCD"	"MS2"	"0"	"62.7"	"100.000"	"39.4419"	"10549"	"10549"	"10518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.2"	""	"90.0"	""	"106.9"	""	"80.3"	""	"102.0"	"117.1"	""	"740"	"60"	"35.000"	"28.000"	"3.99210287225037E-05"	"21"	"0"	"6.222E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPLVVISQGK"	"[R].gSPLVVISQGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.98364"	"1542.96001"	"1542.96195"	"-1.26"	"-0.00097"	"10/96"	"10"	"96"	"2671364.98071289"	"HCD"	"MS2"	"0"	"192.0"	"100.000"	"45.6066"	"13103"	"13103"	"13083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.8"	""	"256.7"	""	"261.8"	""	"313.4"	""	"355.0"	"367.9"	""	"381"	"49"	"32.000"	"25.000"	"0.000249399156331387"	"16"	"0"	"2.905E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPLVVISQGK"	"[R].gSPLVVISQGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"771.98370"	"1542.96013"	"1542.96195"	"-1.18"	"-0.00091"	"10/96"	"10"	"96"	"3376688.78338623"	"HCD"	"MS2"	"0"	"241.4"	"100.000"	"45.3448"	"12947"	"12947"	"12928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"343.2"	""	"322.3"	""	"316.3"	""	"394.6"	""	"428.2"	"485.4"	""	"381"	"66"	"32.000"	"25.000"	"4.3540657204302E-06"	"19"	"0"	"8.077E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPLVVISQGK"	"[R].gSPLVVISQGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.99182"	"1542.96091"	"1542.96195"	"-0.67"	"-0.00035"	"14/96"	"14"	"96"	"108818185.358887"	"HCD"	"MS2"	"29.10175"	"311.3"	"11.278"	"45.4027"	"13020"	"13020"	"13003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"454.7"	""	"433.1"	""	"441.7"	""	"514.9"	""	"549.1"	"555.9"	""	"371"	"32"	"32.000"	"25.000"	"0.0121155717516106"	"15"	"0"	"6.177E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPLVVISQGK"	"[R].gSPLVVISQGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.9552"	"0.0000"	"1"	"1"	"1"	"771.98425"	"1542.96123"	"1542.96195"	"-0.47"	"-0.00036"	"10/96"	"10"	"96"	"7990854.3314209"	"HCD"	"MS2"	"17.23477"	"501.0"	"100.000"	"45.2919"	"12974"	"12974"	"12955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"755.0"	""	"631.5"	""	"676.5"	""	"850.7"	""	"921.5"	"914.1"	""	"367"	"67"	"32.000"	"25.000"	"4.05168868508968E-06"	"20"	"0"	"2.783E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPLVVISQGK"	"[R].gSPLVVISQGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"514.99207"	"1542.96164"	"1542.96195"	"-0.20"	"-0.00010"	"15/96"	"15"	"96"	"91469265.4973145"	"HCD"	"MS2"	"32.14916"	"374.5"	"16.796"	"45.1431"	"12865"	"12865"	"12848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"527.8"	""	"509.2"	""	"530.7"	""	"627.7"	"1.2"	"672.6"	"677.5"	""	"355"	"32"	"32.000"	"25.000"	"0.0125371365881676"	"19"	"0"	"7.537E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPLVVISQGK"	"[R].gSPLVVISQGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.9692"	"0.0000"	"1"	"1"	"1"	"771.98474"	"1542.96221"	"1542.96195"	"0.17"	"0.00013"	"10/96"	"10"	"96"	"6966958.96173096"	"HCD"	"MS2"	"26.72923"	"448.4"	"100.000"	"45.0395"	"12822"	"12822"	"12800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"669.7"	""	"575.0"	""	"574.9"	""	"763.4"	""	"803.3"	"863.8"	""	"355"	"65"	"32.000"	"25.000"	"5.44751402939431E-06"	"19"	"0"	"2.614E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVVKPLK"	"[R].dGVVkPLk.[C]"	"N-Term(TMT6plex); K5(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"772.01239"	"1543.01750"	"1543.01863"	"-0.73"	"-0.00056"	"6/62"	"6"	"62"	"834253.460998535"	"HCD"	"MS2"	"0"	"71.8"	"100.000"	"33.9648"	"8348"	"8348"	"8330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.1"	""	"71.9"	""	"98.2"	""	"124.7"	""	"121.8"	"152.8"	""	"120"	"18"	"27.000"	"20.000"	"0.0865269210914922"	""	"0.0006037"	"0.00378"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLVALAK"	"[R].kLLVALAk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"515.03503"	"1543.09055"	"1543.09140"	"-0.55"	"-0.00028"	"12/72"	"12"	"72"	"3533962.33843994"	"HCD"	"MS2"	"31.98189"	"155.8"	"100.000"	"45.8327"	"13142"	"13142"	"13118"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"207.7"	""	"210.5"	""	"256.1"	""	"243.2"	"0.6"	"266.9"	"290.4"	""	"20"	"19"	"20.000"	"13.000"	"0.0130918192299941"	""	"0.0003839"	"0.00194"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STFVLDEFK"	"[K].sTFVLDEFk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"772.44238"	"1543.87749"	"1543.87722"	"0.18"	"0.00014"	"8/76"	"8"	"76"	"3012378.3873291"	"HCD"	"MS2"	"43.63402"	"240.4"	"100.000"	"59.2059"	"18575"	"18575"	"18553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.8"	""	"255.9"	""	"265.1"	""	"437.4"	"3.7"	"521.2"	"535.2"	""	"913"	"37"	"36.000"	"29.000"	"0.00960374857753395"	""	"0.0001308"	"0.0002606"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STFVLDEFK"	"[K].sTFVLDEFk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"772.44244"	"1543.87761"	"1543.87722"	"0.26"	"0.00020"	"8/76"	"8"	"76"	"3344882.64855957"	"HCD"	"MS2"	"49.64753"	"266.5"	"100.000"	"59.3392"	"18683"	"18683"	"18661"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.3"	""	"271.5"	""	"313.9"	""	"484.3"	"2.1"	"598.0"	"586.3"	""	"913"	"35"	"36.000"	"29.000"	"0.0136911768991786"	""	"0"	"0.0001527"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGIPIMR"	"[K].fLVGPDGIPIMR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"772.44537"	"1543.88347"	"1543.88679"	"-2.15"	"-0.00166"	"10/88"	"10"	"88"	"798103.268432617"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"69.5391"	"22839"	"22839"	"22810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.1"	""	"62.1"	""	"61.7"	""	"58.0"	""	"70.3"	"75.0"	""	"920"	"28"	"36.000"	"29.000"	"0.079023785809249"	"17"	"0.0001889"	"0.0004432"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGIPIMR"	"[K].fLVGPDGIPIMR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"772.44611"	"1543.88494"	"1543.88679"	"-1.20"	"-0.00093"	"15/88"	"15"	"88"	"17319132.0860596"	"HCD"	"MS2"	"0"	"366.5"	"64.159"	"69.8348"	"22960"	"22960"	"22943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"575.8"	""	"604.9"	""	"598.5"	""	"401.4"	"2.4"	"592.2"	"690.8"	""	"906"	"60"	"36.000"	"29.000"	"4.04667384131183E-05"	"24"	"0"	"1.563E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGIPIMR"	"[K].fLVGPDGIPIMR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"772.44629"	"1543.88530"	"1543.88679"	"-0.96"	"-0.00074"	"10/88"	"10"	"88"	"6940557.86022949"	"HCD"	"MS2"	"0.9381007"	"162.2"	"66.269"	"70.0551"	"22997"	"22997"	"22979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"227.7"	""	"258.7"	""	"260.1"	""	"186.8"	""	"291.5"	"316.0"	""	"894"	"35"	"36.000"	"29.000"	"0.0132527963111738"	"20"	"0"	"0.0001117"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGIPIMR"	"[K].fLVGPDGIPIMR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"772.44666"	"1543.88603"	"1543.88679"	"-0.49"	"-0.00038"	"15/88"	"15"	"88"	"4773228.24499512"	"HCD"	"MS2"	"0"	"172.9"	"100.000"	"69.7503"	"22873"	"22873"	"22858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.4"	""	"286.8"	""	"272.8"	""	"211.7"	"0.1"	"266.5"	"322.1"	""	"888"	"60"	"36.000"	"29.000"	"4.28926590271477E-05"	"23"	"0"	"8.262E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGIPIMR"	"[K].fLVGPDGIPIMR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"772.44678"	"1543.88628"	"1543.88679"	"-0.33"	"-0.00025"	"7/88"	"7"	"88"	"932666.848144531"	"HCD"	"MS2"	"5.060787"	"44.5"	"100.000"	"70.1460"	"23086"	"23086"	"23066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.2"	""	"67.0"	""	"61.7"	""	"58.7"	""	"76.3"	"93.8"	""	"887"	"40"	"36.000"	"29.000"	"0.00493053021049385"	"21"	"0.0001308"	"0.000241"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGIPIMR"	"[K].fLVGPDGIPIMR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.9464"	"0.0000"	"1"	"1"	"1"	"515.30042"	"1543.88669"	"1543.88679"	"-0.06"	"-0.00003"	"7/88"	"7"	"88"	"4591490.40991211"	"HCD"	"MS2"	"0"	"35.1"	"100.000"	"69.8647"	"22920"	"22920"	"22901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.1"	""	"50.3"	""	"53.7"	""	"47.3"	"0.1"	"58.0"	"73.9"	""	"880"	"56"	"36.000"	"29.000"	"0.000103861042259945"	"19"	"0"	"0.0001293"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGIPIMR"	"[K].fLVGPDGIPIMR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"515.30060"	"1543.88724"	"1543.88679"	"0.29"	"0.00015"	"7/88"	"7"	"88"	"4063149.63146973"	"HCD"	"MS2"	"0"	"31.2"	"100.000"	"69.7109"	"22909"	"22909"	"22882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.5"	""	"48.7"	""	"45.8"	""	"42.6"	""	"58.0"	"57.8"	""	"879"	"65"	"36.000"	"29.000"	"1.55581831406169E-05"	"20"	"0"	"0.0001795"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSLYFDTK"	"[R].lVSLYFDTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"515.30878"	"1543.91178"	"1543.91360"	"-1.18"	"-0.00061"	"6/74"	"6"	"74"	"2735055.97277832"	"HCD"	"MS2"	"37.11259"	"80.2"	"100.000"	"64.8381"	"20929"	"20929"	"20899"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.4"	""	"93.4"	""	"129.1"	""	"138.1"	"1.3"	"143.4"	"145.0"	""	"672"	"24"	"35.000"	"28.000"	"0.128629113754452"	"22"	"0.0003839"	"0.00175"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSLYFDTK"	"[R].lVSLYFDTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"772.46045"	"1543.91362"	"1543.91360"	"0.01"	"0.00001"	"12/74"	"12"	"74"	"2195523.92022705"	"HCD"	"MS2"	"38.16735"	"166.1"	"100.000"	"64.7482"	"20892"	"20892"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"235.3"	""	"240.7"	""	"238.5"	""	"268.4"	"5.4"	"281.3"	"302.5"	""	"685"	"35"	"35.000"	"28.000"	"0.0104390403394758"	"25"	"0.0001889"	"0.0004609"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSLYFDTK"	"[R].lVSLYFDTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"772.46051"	"1543.91374"	"1543.91360"	"0.09"	"0.00007"	"7/74"	"7"	"74"	"1993482.3427124"	"HCD"	"MS2"	"43.65955"	"154.0"	"100.000"	"64.7357"	"20834"	"20834"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.5"	""	"218.1"	""	"240.2"	""	"254.5"	""	"258.4"	"260.1"	""	"685"	"41"	"35.000"	"28.000"	"0.0025448405472962"	""	"0.0001308"	"0.0002421"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPLFTAVYK"	"[K].fPLFTAVYk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.46771"	"1543.92815"	"1543.92886"	"-0.46"	"-0.00036"	"8/64"	"8"	"64"	"1013743.67657471"	"HCD"	"MS2"	"33.71463"	"78.2"	"100.000"	"72.6225"	"24097"	"24097"	"24079"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.8"	""	"74.4"	""	"99.4"	""	"111.9"	"0.4"	"141.5"	"166.7"	""	"636"	"38"	"35.000"	"28.000"	"0.00454388278806531"	"15"	"0"	"7.707E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPLFTAVYK"	"[K].fPLFTAVYk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"772.46808"	"1543.92888"	"1543.92886"	"0.01"	"0.00001"	"8/64"	"8"	"64"	"965919.907348633"	"HCD"	"MS2"	"32.68621"	"76.8"	"100.000"	"72.6771"	"24068"	"24068"	"24049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.6"	""	"74.3"	""	"98.9"	""	"112.2"	""	"154.0"	"155.1"	""	"633"	"38"	"35.000"	"28.000"	"0.00468137804855238"	"18"	"0"	"0.000113"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLVGGLDIVK"	"[R].gDLVGGLDIVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"3"	"3"	"0.4062"	"0.0000"	"1"	"1"	"1"	"515.31952"	"1543.94400"	"1543.94596"	"-1.27"	"-0.00065"	"7/92"	"7"	"92"	"1967903.88751221"	"HCD"	"MS2"	"0"	"67.9"	"100.000"	"58.5093"	"18296"	"18296"	"18266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.8"	""	"85.3"	""	"101.8"	""	"107.5"	"0.8"	"136.8"	"122.6"	""	"499"	"32"	"33.000"	"26.000"	"0.0159246739804542"	""	"0"	"8.008E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLVGGLDIVK"	"[R].gDLVGGLDIVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"2"	"2"	"0.7875"	"0.0000"	"1"	"1"	"1"	"772.47571"	"1543.94414"	"1543.94596"	"-1.18"	"-0.00091"	"10/92"	"10"	"92"	"1457196.82067871"	"HCD"	"MS2"	"15.35579"	"124.3"	"100.000"	"58.4978"	"18291"	"18291"	"18266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.7"	""	"166.0"	""	"178.9"	""	"193.2"	"0.3"	"228.6"	"244.8"	""	"499"	"80"	"33.000"	"26.000"	"2.4438275135947E-07"	""	"0"	"7.447E-06"	"1.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLVGGLDIVK"	"[R].gDLVGGLDIVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"772.47620"	"1543.94512"	"1543.94596"	"-0.55"	"-0.00042"	"10/92"	"10"	"92"	"1373599.99645996"	"HCD"	"MS2"	"0"	"119.7"	"100.000"	"58.6208"	"18395"	"18395"	"18373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.5"	""	"161.7"	""	"168.3"	""	"218.7"	""	"216.7"	"226.5"	""	"499"	"53"	"33.000"	"26.000"	"0.000131543850424994"	""	"0"	"9.924E-06"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLLGESAVGK"	"[K].lVLLGESAVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"3"	"3"	"0.9057"	"0.0000"	"1"	"1"	"1"	"515.33203"	"1543.98154"	"1543.98235"	"-0.52"	"-0.00027"	"8/82"	"8"	"82"	"13248451.8330078"	"HCD"	"MS2"	"9.043534"	"297.2"	"100.000"	"58.9775"	"18536"	"18536"	"18517"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.9"	""	"435.2"	""	"397.0"	""	"500.2"	"0.1"	"572.1"	"570.8"	""	"321"	"53"	"32.000"	"25.000"	"7.97030675927791E-05"	"21"	"0"	"5.197E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLLGESAVGK"	"[K].lVLLGESAVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.8209"	"0.0000"	"1"	"1"	"1"	"772.49451"	"1543.98174"	"1543.98235"	"-0.40"	"-0.00031"	"10/82"	"10"	"82"	"7627528.44525146"	"HCD"	"MS2"	"4.527134"	"464.1"	"100.000"	"58.9753"	"18535"	"18535"	"18517"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"541.7"	""	"662.2"	""	"649.6"	""	"758.2"	""	"899.9"	"894.6"	""	"319"	"67"	"32.000"	"25.000"	"3.36326189914359E-06"	""	"0"	"1.942E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLLGESAVGK"	"[K].lVLLGESAVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"772.49469"	"1543.98210"	"1543.98235"	"-0.16"	"-0.00012"	"10/82"	"10"	"82"	"4038642.98980713"	"HCD"	"MS2"	"36.06618"	"304.2"	"100.000"	"59.2999"	"18667"	"18667"	"18645"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"333.0"	""	"322.3"	""	"379.6"	""	"550.6"	""	"654.1"	"654.6"	""	"319"	"32"	"32.000"	"25.000"	"0.00941370722874092"	"21"	"0"	"2.229E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLLGESAVGK"	"[K].lVLLGESAVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"515.33240"	"1543.98264"	"1543.98235"	"0.19"	"0.00010"	"8/82"	"8"	"82"	"8791279.590271"	"HCD"	"MS2"	"11.88993"	"198.4"	"100.000"	"58.7971"	"18413"	"18413"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.2"	""	"286.8"	""	"253.5"	""	"332.2"	""	"385.1"	"381.9"	""	"319"	"57"	"32.000"	"25.000"	"3.18244339237536E-05"	"23"	"0"	"5.79E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLLGESAVGK"	"[K].lVLLGESAVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.8657"	"0.0000"	"1"	"1"	"1"	"772.49506"	"1543.98284"	"1543.98235"	"0.31"	"0.00024"	"10/82"	"10"	"82"	"9624483.14019775"	"HCD"	"MS2"	"10.27993"	"582.0"	"100.000"	"58.8478"	"18430"	"18430"	"18409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"691.2"	""	"815.2"	""	"794.7"	""	"984.4"	"4.2"	"1091.8"	"1137.9"	""	"323"	"67"	"32.000"	"25.000"	"3.03509665913727E-06"	"25"	"0"	"2.193E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLLGESAVGK"	"[K].lVLLGESAVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"772.49512"	"1543.98296"	"1543.98235"	"0.39"	"0.00030"	"14/82"	"14"	"82"	"3562183.82220459"	"HCD"	"MS2"	"43.21587"	"281.8"	"100.000"	"59.1618"	"18557"	"18557"	"18537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.1"	""	"299.8"	""	"330.8"	""	"515.5"	""	"609.6"	"628.0"	""	"323"	"34"	"32.000"	"25.000"	"0.00696903309076841"	"19"	"0"	"2.225E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLLGESAVGK"	"[K].lVLLGESAVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"515.33289"	"1543.98410"	"1543.98235"	"1.14"	"0.00058"	"8/82"	"8"	"82"	"5017099.55718994"	"HCD"	"MS2"	"34.23651"	"160.2"	"100.000"	"59.1639"	"18558"	"18558"	"18537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.3"	""	"188.8"	""	"202.7"	""	"297.4"	""	"329.9"	"331.2"	""	"329"	"45"	"32.000"	"25.000"	"0.000557398636848987"	"15"	"0"	"7.987E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHSLKPK"	"[K].fHSLkPk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"3"	"386.75305"	"1543.99038"	"1543.99274"	"-1.53"	"-0.00059"	"4/52"	"4"	"52"	"10191548.2920532"	"HCD"	"MS2"	"13.68276"	"365.0"	"65.890"	"30.0465"	"6751"	"6751"	"6729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"496.4"	""	"530.2"	""	"563.3"	""	"581.7"	"4.6"	"659.1"	"620.7"	""	"282"	"4"	"31.000"	"24.000"	"6.22614330768171"	"13"	"0.001966"	"0.02897"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHSLKPK"	"[K].fHSLkPk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"386.75311"	"1543.99062"	"1543.99274"	"-1.38"	"-0.00053"	"5/52"	"5"	"52"	"126022702.576416"	"HCD"	"MS2"	"7.11431"	"1753.4"	"30.152"	"29.6519"	"6548"	"6548"	"6528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2413.6"	""	"2517.3"	""	"2633.3"	""	"2941.0"	"6.2"	"3217.9"	"2871.4"	""	"280"	"3"	"31.000"	"24.000"	"6.60888257769028"	"13"	"0.005323"	"0.1632"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHSLKPK"	"[K].fHSLkPk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"515.33527"	"1543.99125"	"1543.99274"	"-0.97"	"-0.00050"	"9/52"	"9"	"52"	"28235478.9932861"	"HCD"	"MS2"	"5.560747"	"764.8"	"40.558"	"29.7457"	"6587"	"6587"	"6572"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1035.9"	""	"1075.6"	""	"1145.3"	""	"1230.2"	""	"1464.7"	"1294.1"	""	"278"	"4"	"31.000"	"24.000"	"5.92945531134214"	"13"	"0.0004166"	"0.002145"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHSLKPK"	"[K].fHSLkPk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"515.33551"	"1543.99198"	"1543.99274"	"-0.50"	"-0.00026"	"10/52"	"10"	"52"	"33469082.7854004"	"HCD"	"MS2"	"4.914038"	"654.4"	"30.640"	"29.8058"	"6652"	"6652"	"6636"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"881.7"	""	"900.7"	""	"977.8"	""	"1096.1"	"2.2"	"1236.1"	"1104.3"	""	"278"	"4"	"31.000"	"24.000"	"5.12878862012509"	"13"	"0.0004557"	"0.002528"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHSLKPK"	"[K].fHSLkPk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"386.75351"	"1543.99221"	"1543.99274"	"-0.35"	"-0.00013"	"5/52"	"5"	"52"	"79365897.0388184"	"HCD"	"MS2"	"8.211387"	"1939.8"	"53.907"	"29.6958"	"6607"	"6607"	"6589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2665.6"	""	"2822.3"	""	"2891.6"	""	"3261.6"	"16.1"	"3541.5"	"3165.9"	""	"274"	"5"	"31.000"	"24.000"	"4.81637803523768"	"13"	"0.003286"	"0.07489"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHSLKPK"	"[K].fHSLkPk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"386.75354"	"1543.99233"	"1543.99274"	"-0.27"	"-0.00010"	"5/52"	"5"	"52"	"12911410.3458862"	"HCD"	"MS2"	"4.958686"	"480.7"	"67.583"	"29.9520"	"6671"	"6671"	"6650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"634.9"	"10.0"	"685.1"	""	"739.9"	""	"765.8"	""	"897.2"	"823.2"	""	"274"	"4"	"31.000"	"24.000"	"5.67179554503031"	"13"	"0.001217"	"0.01673"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHSLKPK"	"[K].fHSLkPk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.50043"	"1543.99358"	"1543.99274"	"0.54"	"0.00042"	"5/52"	"5"	"52"	"302991.460693359"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"29.7387"	"6584"	"6584"	"6556"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.8"	""	"40.4"	""	"44.8"	""	"43.6"	"1.0"	"50.8"	"37.4"	""	"261"	"14"	"31.000"	"24.000"	"0.503049256753832"	"13"	"0.0001889"	"0.0007878"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHSLKPK"	"[K].fHSLkPk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"772.50043"	"1543.99358"	"1543.99274"	"0.54"	"0.00042"	"9/52"	"9"	"52"	"221736.754394531"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"29.8333"	"6664"	"6664"	"6636"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.8"	""	"27.5"	""	"27.3"	""	"27.7"	""	"38.5"	"33.6"	""	"261"	"21"	"31.000"	"24.000"	"0.11107351398541"	"16"	"0.0003839"	"0.001879"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDLLYAMCDR"	"[R].aVDLLYAMcDR.[S]"	"N-Term(TMT6plex); C9(Methylthio)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.87671"	"1544.74614"	"1544.74726"	"-0.72"	"-0.00056"	"7/94"	"7"	"94"	"366573.477661133"	"HCD"	"MS2"	"18.42732"	"18.6"	"100.000"	"82.2156"	"27949"	"27949"	"27920"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.4"	""	"28.2"	""	"28.6"	""	"26.9"	""	"31.4"	"31.5"	""	"477"	"18"	"33.000"	"26.000"	"0.351956008186301"	"14"	"0.0001889"	"0.0008035"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDLLYAMCDR"	"[R].aVDLLYAMcDR.[S]"	"N-Term(TMT6plex); C9(Methylthio)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"772.87695"	"1544.74663"	"1544.74726"	"-0.41"	"-0.00031"	"7/94"	"7"	"94"	"563689.38067627"	"HCD"	"MS2"	"40.37034"	"21.8"	"100.000"	"82.3099"	"28038"	"28038"	"28014"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.4"	""	"27.7"	""	"34.4"	""	"27.8"	""	"37.5"	"47.3"	""	"473"	"10"	"33.000"	"26.000"	"2.3759163440084"	"15"	"0.000523"	"0.003128"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAEMYVAK"	"[K].qFAEMYVAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"515.62207"	"1544.85166"	"1544.85471"	"-1.97"	"-0.00102"	"7/80"	"7"	"80"	"4161540.61743164"	"HCD"	"MS2"	"47.30199"	"147.2"	"100.000"	"46.8998"	"13627"	"13627"	"13602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.6"	""	"200.0"	""	"199.6"	""	"249.0"	"0.5"	"293.0"	"276.2"	""	"974"	"10"	"36.000"	"29.000"	"4.69384734504874"	"14"	"0.0002277"	"0.00133"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAEMYVAK"	"[K].qFAEMYVAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"772.93018"	"1544.85307"	"1544.85471"	"-1.06"	"-0.00082"	"8/80"	"8"	"80"	"2371472.15606689"	"HCD"	"MS2"	"21.88033"	"224.6"	"100.000"	"46.4494"	"13395"	"13395"	"13368"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"296.1"	""	"350.4"	""	"340.4"	""	"294.2"	"0.9"	"430.4"	"416.4"	""	"969"	"53"	"36.000"	"29.000"	"0.000256621938565508"	"23"	"0"	"8.588E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAEMYVAK"	"[K].qFAEMYVAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"515.62354"	"1544.85605"	"1544.85471"	"0.87"	"0.00045"	"8/80"	"8"	"80"	"5308964.24145508"	"HCD"	"MS2"	"54.79424"	"172.2"	"100.000"	"46.5667"	"13443"	"13443"	"13416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.1"	""	"252.9"	""	"258.9"	""	"271.6"	"0.5"	"310.3"	"333.5"	""	"1022"	"20"	"37.000"	"30.000"	"0.500519382543845"	"19"	"0.0001889"	"0.000796"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAEMYVAK"	"[K].qFAEMYVAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"772.93237"	"1544.85747"	"1544.85471"	"1.79"	"0.00138"	"8/80"	"8"	"80"	"2987935.54077148"	"HCD"	"MS2"	"19.28419"	"251.7"	"100.000"	"46.7506"	"13566"	"13566"	"13538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"323.9"	""	"414.3"	""	"411.3"	""	"306.0"	"1.0"	"440.2"	"487.6"	""	"1027"	"52"	"37.000"	"30.000"	"0.000342405275991195"	"22"	"0"	"0.0001403"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWQYVYSK"	"[R].iWQYVYSk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"772.94672"	"1544.88616"	"1544.88772"	"-1.01"	"-0.00078"	"5/66"	"5"	"66"	"3661893.23669434"	"HCD"	"MS2"	"4.628691"	"263.5"	"100.000"	"61.7593"	"19671"	"19671"	"19651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"385.0"	""	"380.9"	""	"396.1"	""	"422.5"	"1.8"	"438.4"	"468.1"	""	"902"	"29"	"36.000"	"29.000"	"0.0528660109862207"	"29"	"0.0001889"	"0.0005101"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWQYVYSK"	"[R].iWQYVYSk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"772.94733"	"1544.88738"	"1544.88772"	"-0.22"	"-0.00017"	"9/66"	"9"	"66"	"3240885.65844727"	"HCD"	"MS2"	"4.031692"	"247.8"	"100.000"	"61.5933"	"19550"	"19550"	"19529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.5"	""	"349.2"	""	"363.9"	""	"411.5"	"3.4"	"420.0"	"437.0"	""	"898"	"35"	"36.000"	"29.000"	"0.0151093694649595"	"28"	"0.0001889"	"0.0004405"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPLDGLQAGYR"	"[R].iLPLDGLQAGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"772.95300"	"1544.89873"	"1544.89979"	"-0.69"	"-0.00053"	"9/96"	"9"	"96"	"2084496.02203369"	"HCD"	"MS2"	"6.265729"	"113.2"	"100.000"	"60.8415"	"19243"	"19243"	"19225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.1"	""	"171.7"	""	"176.2"	""	"153.2"	"6.4"	"199.8"	"201.7"	""	"827"	"37"	"36.000"	"29.000"	"0.00752446305035228"	"25"	"0"	"5.739E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPLDGLQAGYR"	"[R].iLPLDGLQAGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"772.95343"	"1544.89958"	"1544.89979"	"-0.14"	"-0.00011"	"11/96"	"11"	"96"	"2391703.81756592"	"HCD"	"MS2"	"15.50698"	"123.4"	"100.000"	"60.9798"	"19353"	"19353"	"19331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.0"	""	"196.6"	""	"182.2"	""	"158.1"	"2.7"	"223.4"	"222.9"	""	"820"	"30"	"36.000"	"29.000"	"0.0424408288338531"	"24"	"0"	"3.051E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPLDGLQAGYR"	"[R].iLPLDGLQAGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"515.63843"	"1544.90073"	"1544.89979"	"0.61"	"0.00031"	"9/96"	"9"	"96"	"1820266.74499512"	"HCD"	"MS2"	"60.46798"	"45.1"	"100.000"	"60.9061"	"19270"	"19270"	"19241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.4"	""	"56.2"	""	"67.5"	""	"77.4"	"1.5"	"87.0"	"86.5"	""	"833"	"34"	"36.000"	"29.000"	"0.0163160491815392"	"19"	"0.0001308"	"0.0002131"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLASVNNLLK"	"[K].dLASVNNLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8507"	"0.0000"	"1"	"1"	"1"	"772.97424"	"1544.94121"	"1544.94121"	"0.00"	"0.00000"	"9/86"	"9"	"86"	"4470285.53704834"	"HCD"	"MS2"	"0"	"310.1"	"100.000"	"55.3932"	"17076"	"17076"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.7"	""	"357.6"	""	"318.5"	""	"485.1"	"1.0"	"668.2"	"793.7"	""	"571"	"67"	"34.000"	"27.000"	"5.49042688603851E-06"	"27"	"0"	"6.779E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLASVNNLLK"	"[K].dLASVNNLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"515.65204"	"1544.94156"	"1544.94121"	"0.23"	"0.00012"	"11/86"	"11"	"86"	"6685318.4274292"	"HCD"	"MS2"	"9.613442"	"206.1"	"100.000"	"55.5334"	"17133"	"17133"	"17109"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"271.0"	""	"263.6"	""	"230.7"	""	"296.9"	""	"406.2"	"490.2"	""	"571"	"42"	"34.000"	"27.000"	"0.00185185130778022"	"25"	"0.0001889"	"0.000571"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLASVNNLLK"	"[K].dLASVNNLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7447"	"0.0000"	"1"	"1"	"1"	"515.65247"	"1544.94284"	"1544.94121"	"1.06"	"0.00054"	"8/86"	"8"	"86"	"7584566.58746338"	"HCD"	"MS2"	"7.359027"	"227.9"	"100.000"	"55.2839"	"16977"	"16977"	"16955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"282.1"	""	"314.8"	""	"263.4"	""	"324.6"	""	"444.4"	"535.8"	""	"553"	"47"	"34.000"	"27.000"	"0.000507802851935818"	"27"	"0.0001889"	"0.0006676"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQVLHFTK"	"[K].iTQVLHFTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8269"	"0.0000"	"1"	"1"	"1"	"515.65662"	"1544.95530"	"1544.95647"	"-0.76"	"-0.00039"	"14/88"	"14"	"88"	"10043834.003479"	"HCD"	"MS2"	"12.69631"	"303.5"	"100.000"	"47.1711"	"13738"	"13738"	"13714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"479.3"	""	"440.8"	""	"292.9"	""	"609.8"	"0.3"	"537.6"	"513.0"	""	"491"	"52"	"33.000"	"26.000"	"0.000146235056236372"	"25"	"0"	"4.88E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQVLHFTK"	"[K].iTQVLHFTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"515.65674"	"1544.95566"	"1544.95647"	"-0.52"	"-0.00027"	"14/88"	"14"	"88"	"8760268.30371094"	"HCD"	"MS2"	"11.27682"	"259.7"	"100.000"	"46.8821"	"13572"	"13572"	"13544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"403.6"	""	"388.9"	""	"245.3"	""	"505.7"	"2.8"	"482.0"	"431.3"	""	"491"	"54"	"33.000"	"26.000"	"8.79126753086971E-05"	"26"	"0"	"7.199E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGGFVWACK"	"[K].sSGGFVWAck.[N]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.40131"	"1545.79534"	"1545.79581"	"-0.31"	"-0.00024"	"5/74"	"5"	"74"	"697568.826477051"	"HCD"	"MS2"	"0"	"78.2"	"100.000"	"58.2660"	"18196"	"18196"	"18171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.1"	""	"107.8"	""	"107.6"	""	"132.7"	"0.9"	"134.6"	"146.1"	""	"746"	"10"	"35.000"	"28.000"	"3.41750242815506"	"13"	"0.00103"	"0.01113"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGGFVWACK"	"[K].sSGGFVWAck.[N]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"773.40149"	"1545.79570"	"1545.79581"	"-0.07"	"-0.00006"	"14/74"	"14"	"74"	"1171024.22106934"	"HCD"	"MS2"	"21.58495"	"121.0"	"100.000"	"58.3591"	"18288"	"18288"	"18261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.9"	"2.6"	"181.2"	""	"169.3"	""	"185.6"	"2.3"	"216.2"	"214.3"	""	"750"	"29"	"35.000"	"28.000"	"0.0444663280562685"	"19"	"0.0001859"	"0.0003485"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYYEQWGK"	"[R].nYYEQWGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"773.40808"	"1545.80889"	"1545.81020"	"-0.85"	"-0.00066"	"7/70"	"7"	"70"	"2609455.18603516"	"HCD"	"MS2"	"0"	"250.8"	"100.000"	"40.7998"	"11146"	"11146"	"11117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"396.6"	""	"208.9"	""	"199.2"	""	"473.2"	"1.8"	"548.4"	"555.3"	""	"842"	"36"	"36.000"	"29.000"	"0.0114889964656218"	"18"	"0.0001859"	"0.0003579"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYYEQWGK"	"[R].nYYEQWGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"773.40851"	"1545.80974"	"1545.81020"	"-0.30"	"-0.00023"	"7/70"	"7"	"70"	"2542061.30096436"	"HCD"	"MS2"	"0"	"259.7"	"100.000"	"40.6577"	"11044"	"11044"	"11013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"389.3"	""	"204.6"	""	"204.4"	""	"497.1"	"4.6"	"571.1"	"599.1"	""	"834"	"38"	"36.000"	"29.000"	"0.00708167603076547"	"18"	"0.0001308"	"0.0003045"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIWDTAGQER"	"[KR].iQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"6"	"1"	""	""	"P35289"	"Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"773.41400"	"1545.82073"	"1545.82227"	"-1.00"	"-0.00077"	"8/108"	"8"	"108"	"1708441.9440918"	"HCD"	"MS2"	"37.07293"	"128.1"	"100.000"	"46.7302"	"13510"	"13510"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.6"	""	"177.3"	""	"178.8"	""	"179.1"	""	"253.5"	"259.5"	""	"970"	"47"	"36.000"	"29.000"	"0.000987965407687273"	"29"	"0"	"1.155E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIWDTAGQER"	"[KR].lQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"16"	"P61107; Q6NYB7; P35281; P51146; P70550; P35280; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3;Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P61107; Q6NYB7; P63012; Q63942; Q53B90; P05714; P35281; P51146; P70550; Q63941; P35284; P35280; P51156; P62824; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3; Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-43 OS=Rattus norvegicus OX=10116 GN=Rab43 PE=2 SV=1; Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-26 OS=Rattus norvegicus OX=10116 GN=Rab26 PE=2 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"773.41400"	"1545.82073"	"1545.82227"	"-1.00"	"-0.00077"	"8/108"	"8"	"108"	"1708441.9440918"	"HCD"	"MS2"	"37.07293"	"128.1"	"100.000"	"46.7302"	"13510"	"13510"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.6"	""	"177.3"	""	"178.8"	""	"179.1"	""	"253.5"	"259.5"	""	"970"	"47"	"36.000"	"29.000"	"0.000987965407687273"	"29"	"0"	"1.155E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLWDTAGQER"	"[KR].lQLWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"3"	"3"	"773.41400"	"1545.82073"	"1545.82227"	"-1.00"	"-0.00077"	"8/108"	"8"	"108"	"1708441.9440918"	"HCD"	"MS2"	"37.07293"	"128.1"	"100.000"	"46.7302"	"13510"	"13510"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.6"	""	"177.3"	""	"178.8"	""	"179.1"	""	"253.5"	"259.5"	""	"970"	"47"	"36.000"	"29.000"	"0.000987965407687273"	"29"	"0"	"1.155E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIWDTAGQER"	"[KR].iQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"6"	"1"	""	""	"P35289"	"Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"773.41455"	"1545.82182"	"1545.82227"	"-0.29"	"-0.00022"	"9/108"	"9"	"108"	"1660836.53814697"	"HCD"	"MS2"	"31.88276"	"123.1"	"100.000"	"47.0285"	"13680"	"13680"	"13650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.8"	""	"158.8"	""	"190.9"	""	"171.3"	""	"241.8"	"243.3"	""	"968"	"46"	"36.000"	"29.000"	"0.00116103513280543"	""	"0"	"1.879E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIWDTAGQER"	"[KR].lQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"16"	"P61107; Q6NYB7; P35281; P51146; P70550; P35280; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3;Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1;Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P61107; Q6NYB7; P63012; Q63942; Q53B90; P05714; P35281; P51146; P70550; Q63941; P35284; P35280; P51156; P62824; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3; Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-43 OS=Rattus norvegicus OX=10116 GN=Rab43 PE=2 SV=1; Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-26 OS=Rattus norvegicus OX=10116 GN=Rab26 PE=2 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"773.41455"	"1545.82182"	"1545.82227"	"-0.29"	"-0.00022"	"9/108"	"9"	"108"	"1660836.53814697"	"HCD"	"MS2"	"31.88276"	"123.1"	"100.000"	"47.0285"	"13680"	"13680"	"13650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.8"	""	"158.8"	""	"190.9"	""	"171.3"	""	"241.8"	"243.3"	""	"968"	"46"	"36.000"	"29.000"	"0.00116103513280543"	""	"0"	"1.879E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLWDTAGQER"	"[KR].lQLWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"3"	"3"	"773.41455"	"1545.82182"	"1545.82227"	"-0.29"	"-0.00022"	"9/108"	"9"	"108"	"1660836.53814697"	"HCD"	"MS2"	"31.88276"	"123.1"	"100.000"	"47.0285"	"13680"	"13680"	"13650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.8"	""	"158.8"	""	"190.9"	""	"171.3"	""	"241.8"	"243.3"	""	"968"	"46"	"36.000"	"29.000"	"0.00116103513280543"	""	"0"	"1.879E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVPGPGK"	"[R].aTDFVVPGPGk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"773.44666"	"1545.88603"	"1545.90410"	"-11.69"	"-0.00903"	"9/82"	"9"	"82"	"1985915.10626221"	"HCD"	"MS2"	"0"	"125.1"	"100.000"	"44.3392"	"12587"	"12587"	"12556"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.9"	""	"196.9"	""	"192.5"	""	"170.8"	"1.6"	"208.5"	"210.0"	""	"977"	"48"	"36.000"	"29.000"	"0.000758341054364522"	"17"	"0"	"0.0001649"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYTLADYLK"	"[R].tYTLADYLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.6744"	"0.0000"	"1"	"1"	"1"	"515.96844"	"1545.89078"	"1545.89287"	"-1.35"	"-0.00070"	"7/74"	"7"	"74"	"9347498.69519043"	"HCD"	"MS2"	"7.863261"	"268.1"	"100.000"	"57.8738"	"18089"	"18089"	"18069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.4"	""	"277.1"	""	"237.1"	""	"540.5"	"3.8"	"641.1"	"626.8"	""	"934"	"43"	"36.000"	"29.000"	"0.00240058385288993"	"29"	"0.0001889"	"0.0004361"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYTLADYLK"	"[R].tYTLADYLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"773.45007"	"1545.89287"	"1545.89287"	"0.00"	"0.00000"	"16/74"	"16"	"74"	"2208214.08740234"	"HCD"	"MS2"	"15.6212"	"186.7"	"100.000"	"57.9048"	"18048"	"18048"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.8"	""	"190.9"	""	"173.6"	""	"363.5"	"0.5"	"435.7"	"438.6"	""	"957"	"50"	"36.000"	"29.000"	"0.000432396273176122"	"29"	"0"	"8.245E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYTLADYLK"	"[R].tYTLADYLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"773.45013"	"1545.89299"	"1545.89287"	"0.08"	"0.00006"	"16/74"	"16"	"74"	"1838865.4085083"	"HCD"	"MS2"	"12.69895"	"149.8"	"100.000"	"58.1128"	"18187"	"18187"	"18165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.9"	""	"157.3"	""	"154.8"	""	"279.3"	""	"349.3"	"345.6"	""	"938"	"48"	"36.000"	"29.000"	"0.000684183888069138"	"28"	"0"	"0.0001179"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYTLADYLK"	"[R].tYTLADYLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"773.45020"	"1545.89311"	"1545.89287"	"0.16"	"0.00012"	"16/74"	"16"	"74"	"8490982.03521729"	"HCD"	"MS2"	"0"	"685.2"	"100.000"	"57.7927"	"18056"	"18056"	"18037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"559.5"	""	"735.4"	""	"606.0"	""	"1368.0"	"4.2"	"1579.5"	"1676.0"	""	"938"	"53"	"36.000"	"29.000"	"0.000230235793915571"	""	"0"	"0.0001652"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYTLADYLK"	"[R].tYTLADYLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7073"	"0.0000"	"1"	"1"	"1"	"515.96930"	"1545.89334"	"1545.89287"	"0.31"	"0.00016"	"7/74"	"7"	"74"	"8795464.4387207"	"HCD"	"MS2"	"11.63435"	"252.0"	"100.000"	"57.6746"	"17954"	"17954"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.9"	""	"262.5"	""	"245.5"	""	"488.3"	"2.9"	"570.1"	"625.2"	""	"940"	"41"	"36.000"	"29.000"	"0.00348415813411431"	"27"	"0.0001889"	"0.0004083"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYTLADYLK"	"[R].tYTLADYLk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"773.45062"	"1545.89397"	"1545.89287"	"0.71"	"0.00055"	"16/74"	"16"	"74"	"7234217.60400391"	"HCD"	"MS2"	"6.702179"	"582.2"	"100.000"	"57.5917"	"17920"	"17920"	"17899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.9"	""	"601.4"	""	"518.3"	""	"1179.7"	"14.5"	"1347.7"	"1409.4"	""	"934"	"51"	"36.000"	"29.000"	"0.00034460127547029"	""	"0"	"0.0001707"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVPGPGK"	"[R].aTDFVVPGPGk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"773.45428"	"1545.90129"	"1545.90410"	"-1.82"	"-0.00140"	"13/82"	"13"	"82"	"2104309.11883545"	"HCD"	"MS2"	"16.60304"	"126.2"	"100.000"	"44.4174"	"12619"	"12619"	"12588"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.5"	""	"189.4"	""	"190.9"	""	"190.4"	""	"213.0"	"220.0"	""	"856"	"39"	"36.000"	"29.000"	"0.00578687057047152"	"22"	"0.0002277"	"0.001317"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVPGPGK"	"[R].aTDFVVPGPGk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"773.45563"	"1545.90398"	"1545.90410"	"-0.08"	"-0.00006"	"13/82"	"13"	"82"	"1734480.8458252"	"HCD"	"MS2"	"0"	"105.8"	"100.000"	"44.2361"	"12495"	"12495"	"12470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.5"	""	"154.6"	""	"164.7"	""	"157.2"	""	"169.9"	"199.4"	""	"844"	"40"	"36.000"	"29.000"	"0.00431829642742478"	"23"	"0.0001859"	"0.0003153"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDAFLVLEQLR"	"[K].lDAFLVLEQLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"773.46252"	"1545.91777"	"1545.92019"	"-1.57"	"-0.00121"	"6/96"	"6"	"96"	"145065.11920166"	"HCD"	"MS2"	"20.00689"	"9.7"	"100.000"	"88.0389"	"30297"	"30297"	"30277"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"7.8"	""	"10.7"	""	"25.7"	""	"24.0"	"20.9"	""	"847"	"40"	"36.000"	"29.000"	"0.00442439012840009"	"21"	"0.0001859"	"0.0003386"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDAFLVLEQLR"	"[K].lDAFLVLEQLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"773.46344"	"1545.91960"	"1545.92019"	"-0.38"	"-0.00030"	"6/96"	"6"	"96"	"133837.40625"	"HCD"	"MS2"	"24.66837"	"9.3"	"100.000"	"88.1671"	"30392"	"30392"	"30381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.7"	""	"9.3"	""	"8.3"	""	"22.2"	""	"28.1"	"16.1"	""	"815"	"39"	"36.000"	"29.000"	"0.0048098065902808"	"21"	"0.0001889"	"0.0004147"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALNIETAIKTK"	"[R].dALNIETAIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.0897"	"0.0000"	"1"	"1"	"1"	"773.46637"	"1545.92546"	"1545.90494"	"13.28"	"0.01026"	"9/124"	"9"	"124"	"3949648.83728027"	"HCD"	"MS2"	"19.46663"	"289.9"	"100.000"	"49.4249"	"14612"	"14612"	"14591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.2"	""	"341.8"	""	"377.4"	""	"501.4"	"0.2"	"561.9"	"580.1"	""	"784"	"78"	"35.000"	"28.000"	"6.53560907320016E-07"	""	"0.0006037"	"0.004627"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALNIETAIKTK"	"[R].dALNIETAIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.1154"	"0.0000"	"1"	"1"	"1"	"773.46710"	"1545.92693"	"1545.90494"	"14.22"	"0.01099"	"9/124"	"9"	"124"	"3923766.21148682"	"HCD"	"MS2"	"3.449755"	"301.5"	"100.000"	"49.7484"	"14787"	"14787"	"14766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"416.6"	""	"357.5"	""	"392.2"	""	"512.7"	"5.1"	"559.4"	"615.6"	""	"778"	"78"	"35.000"	"28.000"	"6.13690783913048E-07"	""	"0.001058"	"0.01448"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLMVGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"773.47394"	"1545.94060"	"1545.94386"	"-2.11"	"-0.00163"	"10/80"	"10"	"80"	"607953.629272461"	"HCD"	"MS2"	"0"	"58.0"	"100.000"	"64.3264"	"20720"	"20720"	"20691"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.9"	""	"87.1"	""	"91.1"	""	"75.5"	""	"98.1"	"92.4"	""	"696"	"56"	"35.000"	"28.000"	"9.74045499232757E-05"	"24"	"0"	"1.41E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLMVGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"515.98566"	"1545.94242"	"1545.94386"	"-0.93"	"-0.00048"	"7/80"	"7"	"80"	"18949984.3109131"	"HCD"	"MS2"	"9.194845"	"443.4"	"100.000"	"63.6741"	"20453"	"20453"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"614.9"	""	"783.5"	""	"785.4"	""	"630.8"	""	"731.8"	"645.5"	""	"692"	"56"	"35.000"	"28.000"	"9.12170659495582E-05"	""	"0"	"5.575E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLMVGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"515.98572"	"1545.94260"	"1545.94386"	"-0.81"	"-0.00042"	"7/80"	"7"	"80"	"13083087.770874"	"HCD"	"MS2"	"11.5892"	"303.6"	"100.000"	"63.5837"	"20363"	"20363"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"417.4"	""	"531.3"	""	"542.5"	""	"448.5"	""	"493.6"	"438.8"	""	"692"	"52"	"35.000"	"28.000"	"0.000198644295923736"	""	"0"	"3.606E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLMVGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"515.98578"	"1545.94278"	"1545.94386"	"-0.69"	"-0.00036"	"7/80"	"7"	"80"	"9739382.17425537"	"HCD"	"MS2"	"6.235543"	"182.4"	"74.396"	"63.8971"	"20491"	"20491"	"20473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.8"	""	"295.9"	""	"326.2"	""	"245.2"	""	"327.0"	"290.8"	""	"692"	"52"	"35.000"	"28.000"	"0.000195468193285057"	""	"0"	"3.161E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLMVGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.8657"	"0.0000"	"1"	"1"	"1"	"773.47510"	"1545.94292"	"1545.94386"	"-0.61"	"-0.00047"	"9/80"	"9"	"80"	"12322114.4381714"	"HCD"	"MS2"	"7.619761"	"754.4"	"100.000"	"63.6697"	"20452"	"20452"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1116.4"	""	"1311.4"	""	"1324.9"	""	"1046.0"	""	"1232.9"	"1096.8"	""	"692"	"67"	"35.000"	"28.000"	"7.46579565566824E-06"	"26"	"0"	"1.689E-05"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLMVGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"773.47516"	"1545.94304"	"1545.94386"	"-0.53"	"-0.00041"	"9/80"	"9"	"80"	"7220083.22088623"	"HCD"	"MS2"	"16.0609"	"469.9"	"100.000"	"63.8926"	"20490"	"20490"	"20473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"800.5"	""	"754.8"	""	"768.1"	""	"606.6"	"2.2"	"791.7"	"716.2"	""	"692"	"62"	"35.000"	"28.000"	"2.07050411890871E-05"	"24"	"0"	"1.757E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLMVGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.8769"	"0.0000"	"1"	"1"	"1"	"773.47522"	"1545.94316"	"1545.94386"	"-0.45"	"-0.00035"	"9/80"	"9"	"80"	"8078399.98394775"	"HCD"	"MS2"	"4.714745"	"500.1"	"100.000"	"63.5793"	"20362"	"20362"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"711.8"	""	"880.3"	""	"878.9"	""	"706.0"	""	"838.6"	"712.9"	""	"692"	"65"	"35.000"	"28.000"	"1.0791357960965E-05"	"25"	"0"	"2.044E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPLEDEK"	"[R].kPLEDEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"515.98602"	"1545.94352"	"1545.94552"	"-1.30"	"-0.00067"	"5/64"	"5"	"64"	"11839569.0025024"	"HCD"	"MS2"	"11.14928"	"757.8"	"100.000"	"29.3336"	"6459"	"6459"	"6439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1160.7"	""	"876.0"	""	"1062.4"	""	"1213.6"	"2.8"	"1364.7"	"1499.6"	""	"694"	"20"	"35.000"	"28.000"	"0.339101315671666"	"14"	"0.0001889"	"0.0004348"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLMVGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"515.98615"	"1545.94388"	"1545.94386"	"0.02"	"0.00001"	"7/80"	"7"	"80"	"6115153.31567383"	"HCD"	"MS2"	"8.194208"	"153.9"	"100.000"	"63.9926"	"20583"	"20583"	"20563"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.0"	""	"234.8"	""	"277.9"	""	"215.6"	"0.9"	"266.0"	"265.9"	""	"694"	"56"	"35.000"	"28.000"	"9.3396257696264E-05"	""	"0"	"2.731E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLMVGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"773.47565"	"1545.94402"	"1545.94386"	"0.10"	"0.00008"	"9/80"	"9"	"80"	"4555109.57287598"	"HCD"	"MS2"	"11.64805"	"312.5"	"100.000"	"63.9832"	"20580"	"20580"	"20563"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"459.0"	"3.0"	"501.7"	""	"557.4"	""	"419.6"	"3.0"	"523.0"	"487.3"	""	"694"	"66"	"35.000"	"28.000"	"8.09709947611509E-06"	"25"	"0"	"1.243E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPLEDEK"	"[R].kPLEDEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"515.98621"	"1545.94406"	"1545.94552"	"-0.94"	"-0.00049"	"4/64"	"4"	"64"	"10537449.8082886"	"HCD"	"MS2"	"13.94673"	"629.0"	"100.000"	"29.3169"	"6411"	"6411"	"6390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"894.7"	""	"714.9"	""	"851.5"	""	"1049.7"	""	"1171.0"	"1282.3"	""	"694"	"9"	"35.000"	"28.000"	"4.11461755614005"	"14"	"0.0001889"	"0.0008582"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLMVGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"773.47595"	"1545.94463"	"1545.94386"	"0.50"	"0.00039"	"9/80"	"9"	"80"	"557708.256286621"	"HCD"	"MS2"	"41.95266"	"51.4"	"100.000"	"64.2382"	"20631"	"20631"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.0"	""	"83.0"	""	"73.4"	""	"74.0"	"3.5"	"85.7"	"80.3"	""	"693"	"62"	"35.000"	"28.000"	"2.28930279734632E-05"	"21"	"0"	"4.098E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.9167"	"0.0000"	"1"	"1"	"1"	"387.24271"	"1545.94900"	"1545.95172"	"-1.76"	"-0.00068"	"8/78"	"8"	"78"	"17518390.1201172"	"HCD"	"MS2"	"0"	"582.0"	"100.000"	"41.4557"	"11415"	"11415"	"11389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1024.5"	"14.8"	"863.2"	""	"865.1"	""	"1052.5"	"11.9"	"784.6"	"876.5"	""	"641"	"12"	"35.000"	"28.000"	"1.81062300427343"	"14"	"0.0006037"	"0.004295"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"515.98792"	"1545.94919"	"1545.95172"	"-1.63"	"-0.00084"	"7/78"	"7"	"78"	"232793848.513916"	"HCD"	"MS2"	"12.74704"	"1641.2"	"18.251"	"41.1399"	"11241"	"11241"	"11221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3034.6"	"37.7"	"2447.0"	""	"2457.9"	""	"3011.6"	"7.4"	"2137.4"	"2344.7"	""	"641"	"24"	"35.000"	"28.000"	"0.121290848401828"	"17"	"0.0001889"	"0.0009839"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"515.98804"	"1545.94956"	"1545.95172"	"-1.40"	"-0.00072"	"5/78"	"5"	"78"	"52975876.3603516"	"HCD"	"MS2"	"2.024925"	"299.3"	"14.676"	"41.9925"	"11635"	"11635"	"11618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"455.8"	"7.2"	"413.9"	""	"433.4"	""	"551.4"	"1.5"	"468.7"	"498.0"	""	"640"	"23"	"35.000"	"28.000"	"0.157452651418064"	"20"	"0.0001889"	"0.0008098"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.5000"	"0.0000"	"1"	"1"	"1"	"387.24286"	"1545.94961"	"1545.95172"	"-1.37"	"-0.00053"	"7/78"	"7"	"78"	"19975089.2841187"	"HCD"	"MS2"	"0"	"533.8"	"75.070"	"41.2585"	"11290"	"11290"	"11269"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"957.5"	""	"790.8"	""	"817.6"	""	"980.5"	"8.5"	"692.5"	"786.8"	""	"632"	"10"	"34.000"	"28.000"	"3.07388122713521"	"18"	"0.0007076"	"0.006943"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"515.98816"	"1545.94992"	"1545.95172"	"-1.16"	"-0.00060"	"7/78"	"7"	"78"	"347425923.303711"	"HCD"	"MS2"	"8.589402"	"964.9"	"7.363"	"41.3550"	"11374"	"11374"	"11357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1808.7"	"33.0"	"1453.4"	""	"1395.2"	""	"1725.2"	"2.6"	"1283.6"	"1400.7"	""	"632"	"26"	"34.000"	"28.000"	"0.0715627601199407"	"20"	"0.0002277"	"0.001143"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"773.47864"	"1545.95000"	"1545.95172"	"-1.11"	"-0.00086"	"12/78"	"12"	"78"	"11498174.1796265"	"HCD"	"MS2"	"8.549909"	"629.2"	"100.000"	"41.1921"	"11263"	"11263"	"11237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1173.2"	""	"944.4"	""	"957.3"	""	"1132.9"	"5.8"	"799.0"	"920.3"	""	"632"	"23"	"34.000"	"28.000"	"0.159840593192984"	"23"	"0.0003571"	"0.001495"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"773.47888"	"1545.95049"	"1545.95172"	"-0.80"	"-0.00062"	"12/78"	"12"	"78"	"6492326.24761963"	"HCD"	"MS2"	"0"	"350.7"	"100.000"	"41.7194"	"11523"	"11523"	"11506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"586.5"	""	"479.0"	""	"568.4"	""	"637.1"	""	"464.0"	"577.4"	""	"631"	"24"	"34.000"	"28.000"	"0.127937942933965"	"23"	"0.001217"	"0.0181"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"773.47900"	"1545.95073"	"1545.95172"	"-0.64"	"-0.00049"	"7/78"	"7"	"78"	"12980740.6586304"	"HCD"	"MS2"	"0"	"701.4"	"100.000"	"41.4259"	"11403"	"11403"	"11373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1340.1"	""	"1047.7"	""	"1046.7"	""	"1248.7"	"7.8"	"890.5"	"1031.4"	""	"631"	"21"	"34.000"	"28.000"	"0.23173912540357"	"23"	"0.0004557"	"0.002536"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.7143"	"0.0000"	"1"	"1"	"1"	"387.24329"	"1545.95131"	"1545.95172"	"-0.26"	"-0.00010"	"8/78"	"8"	"78"	"3086740.39001465"	"HCD"	"MS2"	"9.373919"	"129.1"	"100.000"	"41.8616"	"11581"	"11581"	"11554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"200.8"	""	"191.3"	""	"200.6"	""	"224.8"	"2.4"	"179.0"	"220.5"	""	"605"	"14"	"34.000"	"27.000"	"1.20427419092433"	"18"	"0.0003839"	"0.00208"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.4444"	"0.0000"	"1"	"1"	"1"	"387.24329"	"1545.95131"	"1545.95172"	"-0.26"	"-0.00010"	"6/78"	"6"	"78"	"5186881.49005127"	"HCD"	"MS2"	"2.292724"	"197.3"	"100.000"	"41.5932"	"11427"	"11427"	"11403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"300.6"	"6.6"	"279.3"	""	"293.2"	""	"347.9"	"0.8"	"306.8"	"330.5"	""	"605"	"9"	"34.000"	"27.000"	"3.74735967425436"	"18"	"0.0004166"	"0.002155"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"773.47949"	"1545.95171"	"1545.95172"	"-0.01"	"-0.00001"	"12/78"	"12"	"78"	"6698959.15911865"	"HCD"	"MS2"	"0"	"367.9"	"100.000"	"41.5037"	"11390"	"11390"	"11371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"656.8"	""	"519.9"	""	"550.9"	""	"654.2"	""	"505.5"	"590.1"	""	"605"	"23"	"34.000"	"27.000"	"0.148841959543639"	"23"	"0.0003839"	"0.001698"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"515.98926"	"1545.95322"	"1545.95172"	"0.97"	"0.00050"	"7/78"	"7"	"78"	"1258561878.73047"	"HCD"	"MS2"	"4.377996"	"456.4"	"1.053"	"41.4234"	"11357"	"11357"	"11341"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"816.2"	"14.3"	"653.4"	""	"701.5"	""	"826.5"	""	"616.8"	"678.7"	""	"619"	"26"	"34.000"	"27.000"	"0.0754502448285129"	"20"	"0.0003571"	"0.001537"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVNFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"515.98969"	"1545.95450"	"1545.95172"	"1.80"	"0.00093"	"7/78"	"7"	"78"	"1307709658.99609"	"HCD"	"MS2"	"3.56958"	"461.0"	"1.074"	"41.6415"	"11491"	"11491"	"11474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"818.7"	"15.8"	"626.2"	""	"719.8"	""	"839.4"	""	"614.5"	"719.7"	""	"588"	"27"	"34.000"	"27.000"	"0.0627115204465093"	"18"	"0.0005564"	"0.003302"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGEAKPK"	"[K].aASGEAkPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"515.99005"	"1545.95560"	"1545.95675"	"-0.75"	"-0.00038"	"9/72"	"9"	"72"	"4400129.94238281"	"HCD"	"MS2"	"7.828167"	"273.1"	"100.000"	"24.1916"	"4403"	"4403"	"4381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"422.4"	""	"451.9"	""	"521.6"	""	"381.9"	"1.9"	"489.4"	"309.9"	""	"584"	"7"	"34.000"	"27.000"	"5.61542784841766"	"13"	"0"	"0.0001216"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGTGESGK"	"[K].lLLLGTGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"515.99103"	"1545.95853"	"1545.96161"	"-2.00"	"-0.00103"	"8/86"	"8"	"86"	"4083656.99847412"	"HCD"	"MS2"	"29.45402"	"117.4"	"100.000"	"56.1194"	"17319"	"17319"	"17291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.1"	""	"172.4"	""	"152.9"	""	"192.8"	"4.5"	"227.5"	"235.3"	""	"523"	"46"	"34.000"	"27.000"	"0.000633099095721511"	"15"	"0"	"7.219E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGTGESGK"	"[K].lLLLGTGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"515.99164"	"1545.96036"	"1545.96161"	"-0.81"	"-0.00042"	"8/86"	"8"	"86"	"5143115.06378174"	"HCD"	"MS2"	"18.95277"	"129.9"	"100.000"	"56.3574"	"17470"	"17470"	"17445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.8"	""	"169.7"	""	"166.0"	""	"222.5"	"0.5"	"255.6"	"271.6"	""	"517"	"50"	"34.000"	"27.000"	"0.000271932144383303"	"19"	"0"	"4.316E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGTGESGK"	"[K].lLLLGTGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"773.48401"	"1545.96074"	"1545.96161"	"-0.57"	"-0.00044"	"9/86"	"9"	"86"	"1910844.34655762"	"HCD"	"MS2"	"0"	"153.0"	"100.000"	"56.0387"	"17286"	"17286"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.5"	""	"217.5"	""	"208.2"	""	"232.3"	"5.3"	"266.5"	"319.8"	""	"521"	"58"	"34.000"	"27.000"	"4.01612967993361E-05"	"24"	"0"	"1.992E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGTGESGK"	"[K].lLLLGTGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"773.48419"	"1545.96111"	"1545.96161"	"-0.33"	"-0.00025"	"10/86"	"10"	"86"	"3742198.50286865"	"HCD"	"MS2"	"10.7784"	"264.4"	"100.000"	"56.3505"	"17467"	"17467"	"17445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.1"	"2.7"	"348.0"	""	"339.1"	""	"435.8"	"6.9"	"517.2"	"545.6"	""	"517"	"57"	"34.000"	"27.000"	"4.81349524827352E-05"	"25"	"0"	"1.977E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGTGESGK"	"[K].lLLLGTGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"515.99200"	"1545.96146"	"1545.96161"	"-0.10"	"-0.00005"	"8/86"	"8"	"86"	"6023063.30194092"	"HCD"	"MS2"	"1.15299"	"147.6"	"100.000"	"56.4101"	"17437"	"17437"	"17419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.0"	""	"184.6"	""	"192.5"	""	"267.5"	"0.1"	"308.7"	"306.1"	""	"517"	"55"	"34.000"	"27.000"	"7.95171026610474E-05"	"19"	"0"	"4.062E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGTGESGK"	"[K].lLLLGTGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"773.48444"	"1545.96160"	"1545.96161"	"-0.01"	"-0.00001"	"10/86"	"10"	"86"	"3391834.38061523"	"HCD"	"MS2"	"9.113509"	"247.2"	"100.000"	"56.6569"	"17592"	"17592"	"17573"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"254.5"	""	"311.6"	""	"300.1"	""	"426.2"	"4.5"	"520.6"	"531.3"	""	"517"	"61"	"34.000"	"27.000"	"2.02050787486083E-05"	"26"	"0"	"1.868E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLLGTGESGK"	"[K].lLLLGTGESGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471; Q9JID2"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"773.48535"	"1545.96343"	"1545.96161"	"1.17"	"0.00091"	"10/86"	"10"	"86"	"5241573.32409668"	"HCD"	"MS2"	"3.112476"	"351.1"	"100.000"	"56.3707"	"17421"	"17421"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"367.0"	""	"435.8"	""	"440.9"	""	"592.5"	"0.7"	"744.6"	"755.5"	""	"538"	"66"	"34.000"	"27.000"	"7.02671404333387E-06"	""	"0"	"1.872E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNYGIPAIVK"	"[R].lNYGIPAIVk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"773.49158"	"1545.97588"	"1545.97687"	"-0.64"	"-0.00050"	"9/90"	"9"	"90"	"2779869.72546387"	"HCD"	"MS2"	"0"	"184.0"	"100.000"	"59.4895"	"18691"	"18691"	"18665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"238.0"	""	"273.8"	""	"273.4"	""	"267.4"	""	"322.7"	"370.0"	""	"423"	"66"	"33.000"	"26.000"	"4.91258832429528E-06"	"26"	"0"	"3.162E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNYGIPAIVK"	"[R].lNYGIPAIVk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"515.99719"	"1545.97702"	"1545.97687"	"0.10"	"0.00005"	"9/90"	"9"	"90"	"4861750.80548096"	"HCD"	"MS2"	"44.57235"	"112.6"	"100.000"	"59.7012"	"18831"	"18831"	"18805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.7"	""	"171.6"	""	"160.7"	""	"164.6"	""	"189.5"	"219.4"	""	"404"	"31"	"33.000"	"26.000"	"0.0169961818612329"	""	"0.0001859"	"0.0003232"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAPWQVMLFR"	"[K].gIAPWQVMLFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"516.29639"	"1546.87461"	"1546.87656"	"-1.26"	"-0.00065"	"13/92"	"13"	"92"	"456865.849609375"	"HCD"	"MS2"	"6.199858"	"11.1"	"100.000"	"78.0679"	"26308"	"26308"	"26287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.0"	""	"16.7"	""	"12.5"	""	"15.1"	""	"22.4"	"23.1"	""	"1093"	"31"	"37.000"	"30.000"	"0.0487068637690092"	"22"	"0"	"0.0001274"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAPWQVMLFR"	"[K].gIAPWQVMLFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"773.94098"	"1546.87468"	"1546.87656"	"-1.21"	"-0.00094"	"9/92"	"9"	"92"	"2361738.50134277"	"HCD"	"MS2"	"0"	"107.4"	"100.000"	"77.8449"	"26217"	"26217"	"26197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.5"	""	"207.0"	""	"158.7"	""	"103.3"	"1.6"	"163.6"	"174.9"	""	"1095"	"49"	"37.000"	"30.000"	"0.000718429444713014"	"25"	"0"	"1.17E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAPWQVMLFR"	"[K].gIAPWQVMLFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"773.94128"	"1546.87529"	"1546.87656"	"-0.82"	"-0.00063"	"8/92"	"8"	"92"	"1826669.33178711"	"HCD"	"MS2"	"17.69675"	"104.0"	"100.000"	"78.1471"	"26290"	"26290"	"26273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"179.3"	""	"149.1"	""	"131.0"	""	"146.2"	"1.3"	"181.2"	"196.0"	""	"1088"	"42"	"37.000"	"30.000"	"0.00372905595190248"	"20"	"0"	"2.075E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAPWQVMLFR"	"[K].gIAPWQVMLFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"773.94153"	"1546.87578"	"1546.87656"	"-0.50"	"-0.00039"	"9/92"	"9"	"92"	"1930317.88452148"	"HCD"	"MS2"	"0"	"96.0"	"100.000"	"77.8623"	"26173"	"26173"	"26153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.6"	""	"168.9"	""	"137.3"	""	"102.0"	"1.2"	"141.5"	"170.3"	""	"1106"	"50"	"37.000"	"30.000"	"0.000580396963044734"	"24"	"0"	"1.393E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAPWQVMLFR"	"[K].gIAPWQVMLFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"773.94153"	"1546.87578"	"1546.87656"	"-0.50"	"-0.00039"	"9/92"	"9"	"92"	"1595145.30792236"	"HCD"	"MS2"	"24.22447"	"90.3"	"100.000"	"78.1392"	"26337"	"26337"	"26319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.8"	""	"125.7"	""	"108.9"	""	"136.2"	""	"161.5"	"163.5"	""	"1106"	"23"	"37.000"	"30.000"	"0.266517132086695"	"18"	"0"	"9.346E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLHYHIK"	"[R].dYLHYHIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"4"	"4"	"0.4348"	"0.0000"	"1"	"1"	"1"	"387.47455"	"1546.87636"	"1546.87822"	"-1.20"	"-0.00046"	"5/56"	"5"	"56"	"19861257.7679443"	"HCD"	"MS2"	"11.81755"	"494.7"	"75.162"	"34.6439"	"8622"	"8622"	"8602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"816.3"	""	"736.0"	""	"709.8"	""	"759.2"	"7.7"	"798.9"	"849.6"	""	"1101"	"23"	"37.000"	"30.000"	"0.281680850464939"	"27"	"0.0003146"	"0.001442"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLHYHIK"	"[R].dYLHYHIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"4"	"4"	"0.4286"	"0.0000"	"1"	"1"	"1"	"387.47495"	"1546.87795"	"1546.87822"	"-0.17"	"-0.00007"	"5/56"	"5"	"56"	"17983132.3798828"	"HCD"	"MS2"	"22.54108"	"604.6"	"100.000"	"34.5839"	"8555"	"8555"	"8531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"983.0"	""	"894.9"	""	"874.9"	""	"958.9"	"11.9"	"970.8"	"1022.2"	""	"1085"	"21"	"37.000"	"30.000"	"0.405881954027301"	"26"	"0.0004557"	"0.002544"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDTITEWK"	"[K].vPDTITEWk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"773.94794"	"1546.88860"	"1546.88812"	"0.31"	"0.00024"	"8/72"	"8"	"72"	"19354051.0072632"	"HCD"	"MS2"	"22.97759"	"839.0"	"85.133"	"52.8211"	"16041"	"16041"	"16022"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1292.1"	""	"1362.4"	""	"880.4"	""	"1473.8"	"11.6"	"1537.5"	"1387.7"	""	"1003"	"42"	"37.000"	"30.000"	"0.00286596536290942"	"19"	"0.0001859"	"0.0003717"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDTITEWK"	"[K].vPDTITEWk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"516.30115"	"1546.88889"	"1546.88812"	"0.50"	"0.00026"	"5/72"	"5"	"72"	"8950116.05187988"	"HCD"	"MS2"	"42.57074"	"272.6"	"100.000"	"52.9476"	"16093"	"16093"	"16070"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"376.1"	""	"421.2"	""	"362.7"	""	"465.1"	"1.3"	"494.0"	"460.8"	""	"990"	"18"	"36.000"	"29.000"	"0.878223793040632"	"20"	"0.001945"	"0.02756"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDTITEWK"	"[K].vPDTITEWk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"773.94830"	"1546.88933"	"1546.88812"	"0.78"	"0.00061"	"8/72"	"8"	"72"	"19156415.2285767"	"HCD"	"MS2"	"17.97264"	"979.8"	"100.000"	"52.6571"	"15924"	"15924"	"15906"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1430.4"	""	"1573.1"	""	"1030.4"	""	"1752.7"	"7.8"	"1847.0"	"1641.2"	""	"988"	"40"	"36.000"	"29.000"	"0.00535459895526475"	"18"	"0.0001889"	"0.0003966"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVnFk.[F]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"516.31616"	"1546.93393"	"1546.93573"	"-1.16"	"-0.00060"	"7/78"	"7"	"78"	"14234998.2443848"	"HCD"	"MS2"	"27.37113"	"540.2"	"100.000"	"43.8320"	"12329"	"12329"	"12316"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"785.1"	"11.6"	"669.8"	""	"725.1"	""	"1050.3"	""	"904.5"	"968.6"	""	"707"	"24"	"35.000"	"28.000"	"0.156815655629761"	"16"	"0"	"0.000168"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].lRVDPVnFk.[F]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"516.31622"	"1546.93412"	"1546.93573"	"-1.05"	"-0.00054"	"7/78"	"7"	"78"	"15915111.5251465"	"HCD"	"MS2"	"14.93979"	"608.2"	"100.000"	"44.1163"	"12495"	"12495"	"12476"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"859.7"	"15.5"	"746.4"	""	"830.1"	""	"1168.1"	""	"1036.4"	"1111.5"	""	"707"	"22"	"35.000"	"28.000"	"0.202483396953491"	"22"	"7.476E-05"	"0.000199"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFDWPLLIK"	"[R].gFDWPLLIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"516.31708"	"1546.93668"	"1546.93976"	"-1.99"	"-0.00103"	"11/64"	"11"	"64"	"841258.608703613"	"HCD"	"MS2"	"20.71157"	"28.1"	"100.000"	"80.5855"	"27335"	"27335"	"27311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.9"	""	"34.7"	""	"41.7"	""	"47.1"	"0.9"	"52.5"	"49.1"	""	"675"	"22"	"35.000"	"28.000"	"0.221959520107454"	"21"	"0.0001889"	"0.0008775"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFDWPLLIK"	"[R].gFDWPLLIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"516.31781"	"1546.93888"	"1546.93976"	"-0.57"	"-0.00029"	"7/64"	"7"	"64"	"695775.060791016"	"HCD"	"MS2"	"20.80511"	"26.1"	"100.000"	"80.5722"	"27279"	"27279"	"27249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.2"	""	"34.9"	""	"42.2"	""	"48.7"	""	"45.2"	"51.7"	""	"654"	"16"	"35.000"	"28.000"	"0.810117012846084"	"21"	"0.0001889"	"0.00103"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFDWPLLIK"	"[R].gFDWPLLIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"773.97327"	"1546.93926"	"1546.93976"	"-0.32"	"-0.00025"	"8/64"	"8"	"64"	"1107529.25140381"	"HCD"	"MS2"	"4.003989"	"94.8"	"100.000"	"80.7040"	"27332"	"27332"	"27312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.0"	""	"110.8"	""	"140.4"	""	"148.5"	""	"171.8"	"179.9"	""	"654"	"51"	"35.000"	"28.000"	"0.000283496533372937"	"25"	"0"	"0.0001564"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFDWPLLIK"	"[R].gFDWPLLIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"773.97339"	"1546.93950"	"1546.93976"	"-0.17"	"-0.00013"	"8/64"	"8"	"64"	"645496.420410156"	"HCD"	"MS2"	"0"	"53.9"	"100.000"	"80.4610"	"27284"	"27284"	"27263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.7"	""	"78.6"	""	"81.4"	""	"91.1"	"3.0"	"87.8"	"95.8"	""	"654"	"48"	"35.000"	"28.000"	"0.000478131936047347"	"24"	"0"	"7.85E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFDWPLLIK"	"[R].gFDWPLLIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"773.97363"	"1546.93999"	"1546.93976"	"0.15"	"0.00012"	"8/64"	"8"	"64"	"913361.779174805"	"HCD"	"MS2"	"10.83295"	"72.6"	"100.000"	"80.7678"	"27409"	"27409"	"27390"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.6"	""	"98.5"	""	"105.7"	""	"109.3"	"3.1"	"123.6"	"135.6"	""	"650"	"52"	"35.000"	"28.000"	"0.000184877202524248"	"24"	"0"	"6.691E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFDWPLLIK"	"[R].gFDWPLLIk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"773.97388"	"1546.94048"	"1546.93976"	"0.47"	"0.00036"	"8/64"	"8"	"64"	"370044.875427246"	"HCD"	"MS2"	"16.79989"	"34.6"	"100.000"	"80.4130"	"27214"	"27214"	"27185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.4"	""	"44.1"	""	"52.9"	""	"58.0"	"0.4"	"54.4"	"65.8"	""	"627"	"40"	"34.000"	"27.000"	"0.00285915398138078"	"21"	"0"	"6.388E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLLAPYAK"	"[K].vVDLLAPYAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"516.32312"	"1546.95481"	"1546.96089"	"-3.93"	"-0.00203"	"10/72"	"10"	"72"	"11226939.1782837"	"HCD"	"MS2"	"37.99184"	"274.6"	"100.000"	"65.1124"	"21041"	"21041"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"357.0"	""	"414.9"	""	"413.8"	""	"429.8"	""	"509.3"	"478.9"	""	"520"	"26"	"34.000"	"27.000"	"0.0636756442879633"	"16"	"0.0001889"	"0.000914"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLLAPYAK"	"[K].vVDLLAPYAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"516.32361"	"1546.95627"	"1546.96089"	"-2.98"	"-0.00154"	"10/72"	"10"	"72"	"7470135.92718506"	"HCD"	"MS2"	"36.48409"	"188.8"	"100.000"	"65.1163"	"20989"	"20989"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.1"	""	"266.2"	""	"281.2"	""	"312.3"	"1.1"	"334.6"	"338.5"	""	"506"	"30"	"34.000"	"27.000"	"0.0246672378342499"	"16"	"0.0001889"	"0.000436"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLLAPYAK"	"[K].vVDLLAPYAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"773.98273"	"1546.95818"	"1546.96089"	"-1.75"	"-0.00135"	"16/72"	"16"	"72"	"7222788.96881104"	"HCD"	"MS2"	"0"	"423.6"	"100.000"	"65.0986"	"21035"	"21035"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"553.2"	""	"673.4"	""	"636.1"	""	"683.9"	"5.4"	"718.6"	"738.5"	""	"521"	"55"	"34.000"	"27.000"	"8.58633300222278E-05"	"24"	"0"	"5.085E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLLAPYAK"	"[K].vVDLLAPYAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"516.32477"	"1546.95975"	"1546.96089"	"-0.73"	"-0.00038"	"10/72"	"10"	"72"	"13268097.5472412"	"HCD"	"MS2"	"6.891428"	"200.4"	"69.279"	"65.3982"	"21157"	"21157"	"21139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.2"	""	"299.9"	""	"296.1"	""	"313.7"	""	"359.8"	"388.8"	""	"513"	"35"	"34.000"	"27.000"	"0.00877177270047663"	"17"	"0.0003839"	"0.001556"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLLAPYAK"	"[K].vVDLLAPYAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"773.98376"	"1546.96025"	"1546.96089"	"-0.41"	"-0.00032"	"16/72"	"16"	"72"	"4432689.3493042"	"HCD"	"MS2"	"0"	"276.2"	"100.000"	"65.0860"	"20977"	"20977"	"20953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"369.9"	""	"427.4"	""	"405.6"	""	"435.9"	"1.2"	"468.6"	"506.0"	""	"511"	"55"	"34.000"	"27.000"	"8.98236925549801E-05"	"23"	"0"	"3.362E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLLAPYAK"	"[K].vVDLLAPYAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"773.98383"	"1546.96037"	"1546.96089"	"-0.33"	"-0.00026"	"16/72"	"16"	"72"	"10520515.2640381"	"HCD"	"MS2"	"0"	"514.9"	"80.519"	"65.3938"	"21156"	"21156"	"21139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"658.0"	""	"772.0"	""	"800.4"	""	"749.4"	""	"912.6"	"986.2"	""	"511"	"59"	"34.000"	"27.000"	"3.30667037490471E-05"	"22"	"0"	"8.49E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLLAPYAK"	"[K].vVDLLAPYAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"773.98401"	"1546.96074"	"1546.96089"	"-0.09"	"-0.00007"	"16/72"	"16"	"72"	"15594774.6220703"	"HCD"	"MS2"	"0"	"584.6"	"63.607"	"65.3811"	"21098"	"21098"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"729.1"	""	"870.9"	""	"865.1"	""	"884.2"	"5.7"	"1066.8"	"1118.0"	""	"511"	"53"	"34.000"	"27.000"	"0.000126296380525136"	"23"	"0"	"8.332E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLLAPYAK"	"[K].vVDLLAPYAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"773.98425"	"1546.96123"	"1546.96089"	"0.22"	"0.00017"	"8/72"	"8"	"72"	"1155684.39782715"	"HCD"	"MS2"	"40.77495"	"61.7"	"100.000"	"65.7247"	"21238"	"21238"	"21209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.5"	""	"86.9"	""	"85.0"	""	"90.3"	""	"112.6"	"130.7"	""	"502"	"22"	"33.000"	"27.000"	"0.176877960310754"	"21"	"0.0001308"	"0.0002311"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLLAPYAK"	"[K].vVDLLAPYAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"516.32532"	"1546.96140"	"1546.96089"	"0.33"	"0.00017"	"10/72"	"10"	"72"	"12929603.9569092"	"HCD"	"MS2"	"6.066528"	"275.0"	"97.417"	"65.4203"	"21114"	"21114"	"21097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"312.7"	""	"402.7"	""	"423.1"	""	"417.5"	""	"518.7"	"539.6"	""	"502"	"30"	"33.000"	"27.000"	"0.0230501481717379"	"16"	"0.0002277"	"0.001212"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPHLVLDQLR"	"[K].lDPHLVLDQLR.[C]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62812; Q9JLT0"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q62812; Q9JLT0"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"516.64111"	"1547.90879"	"1547.91069"	"-1.23"	"-0.00064"	"10/96"	"10"	"96"	"8815244.984375"	"HCD"	"MS2"	"30.95254"	"150.1"	"100.000"	"57.7826"	"17998"	"17998"	"17979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.6"	""	"160.5"	""	"151.4"	""	"316.6"	"2.4"	"330.9"	"332.3"	""	"879"	"32"	"36.000"	"29.000"	"0.026300189602901"	"22"	"0.0001308"	"0.0002793"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPHLVLDQLR"	"[K].lDPHLVLDQLR.[C]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62812; Q9JLT0"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q62812; Q9JLT0"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"3"	"3"	"0.8302"	"0.0000"	"1"	"1"	"1"	"516.64178"	"1547.91080"	"1547.91069"	"0.07"	"0.00004"	"8/96"	"8"	"96"	"8803531.41003418"	"HCD"	"MS2"	"26.7656"	"140.6"	"100.000"	"57.9885"	"18136"	"18136"	"18117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.0"	""	"157.4"	""	"157.1"	""	"289.6"	""	"287.8"	"302.2"	""	"858"	"53"	"36.000"	"29.000"	"0.00019927705307056"	"25"	"0"	"3.966E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEIAALTSK"	"[R].sLGEIAALTSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"774.47314"	"1547.93901"	"1547.94088"	"-1.21"	"-0.00093"	"17/98"	"17"	"98"	"10505964.036499"	"HCD"	"MS2"	"0"	"675.5"	"100.000"	"56.6989"	"17609"	"17609"	"17589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"882.3"	""	"866.0"	""	"868.6"	""	"1225.2"	"0.5"	"1248.1"	"1313.3"	""	"614"	"68"	"34.000"	"27.000"	"5.02502672078337E-06"	"27"	"0"	"2.059E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEIAALTSK"	"[R].sLGEIAALTSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"516.65125"	"1547.93918"	"1547.94088"	"-1.10"	"-0.00057"	"14/98"	"14"	"98"	"17190202.7069092"	"HCD"	"MS2"	"2.970569"	"135.0"	"33.363"	"56.7976"	"17596"	"17596"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.1"	""	"160.9"	""	"182.6"	""	"222.1"	""	"259.6"	"280.1"	""	"612"	"45"	"34.000"	"27.000"	"0.000878458858099556"	"23"	"0"	"3.746E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEIAALTSK"	"[R].sLGEIAALTSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"516.65149"	"1547.93991"	"1547.94088"	"-0.62"	"-0.00032"	"13/98"	"13"	"98"	"22066909.282959"	"HCD"	"MS2"	"17.53546"	"468.7"	"100.000"	"56.7032"	"17611"	"17611"	"17589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"633.6"	"3.5"	"582.3"	""	"589.8"	""	"866.0"	""	"874.3"	"898.0"	""	"612"	"44"	"34.000"	"27.000"	"0.00131438146590056"	"22"	"0"	"2.243E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEIAALTSK"	"[R].sLGEIAALTSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"516.65149"	"1547.93991"	"1547.94088"	"-0.62"	"-0.00032"	"15/98"	"15"	"98"	"20370436.633728"	"HCD"	"MS2"	"24.70164"	"460.3"	"100.000"	"56.4980"	"17473"	"17473"	"17451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"600.3"	""	"582.5"	""	"581.5"	""	"859.4"	""	"849.7"	"893.6"	""	"612"	"44"	"34.000"	"27.000"	"0.00122947988119776"	"23"	"0"	"2.524E-05"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEIAALTSK"	"[R].sLGEIAALTSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"516.65155"	"1547.94010"	"1547.94088"	"-0.51"	"-0.00026"	"13/98"	"13"	"98"	"15788718.8726807"	"HCD"	"MS2"	"4.497994"	"163.6"	"47.467"	"57.0027"	"17734"	"17734"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.8"	""	"216.2"	""	"217.3"	""	"285.1"	"0.9"	"304.3"	"327.8"	""	"611"	"39"	"34.000"	"27.000"	"0.00405519006836435"	"17"	"0"	"5.621E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEIAALTSK"	"[R].sLGEIAALTSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"774.47382"	"1547.94036"	"1547.94088"	"-0.34"	"-0.00026"	"17/98"	"17"	"98"	"5939043.09283447"	"HCD"	"MS2"	"6.951023"	"399.1"	"100.000"	"57.0071"	"17735"	"17735"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"542.2"	""	"485.6"	""	"532.5"	""	"668.9"	"2.1"	"737.9"	"814.8"	""	"605"	"70"	"34.000"	"27.000"	"2.92904051519028E-06"	"24"	"0"	"1.688E-05"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEIAALTSK"	"[R].sLGEIAALTSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"774.47406"	"1547.94084"	"1547.94088"	"-0.02"	"-0.00002"	"17/98"	"17"	"98"	"4324559.91241455"	"HCD"	"MS2"	"12.3201"	"292.8"	"100.000"	"56.8479"	"17616"	"17616"	"17595"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"389.4"	""	"402.2"	""	"411.3"	""	"483.9"	""	"522.7"	"568.8"	""	"605"	"70"	"34.000"	"27.000"	"3.22645326672153E-06"	"24"	"0"	"1.169E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEIAALTSK"	"[R].sLGEIAALTSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8429"	"0.0000"	"1"	"1"	"1"	"774.47467"	"1547.94206"	"1547.94088"	"0.77"	"0.00059"	"17/98"	"17"	"98"	"14839708.0345459"	"HCD"	"MS2"	"0"	"1019.1"	"100.000"	"56.5328"	"17487"	"17487"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1315.6"	""	"1302.0"	""	"1285.2"	""	"1849.8"	"5.2"	"1877.7"	"2027.8"	""	"618"	"70"	"34.000"	"27.000"	"2.82460991614307E-06"	""	"0"	"3.2E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQNVFEVK"	"[K].lIQNVFEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"774.48108"	"1547.95488"	"1547.95614"	"-0.81"	"-0.00063"	"8/76"	"8"	"76"	"2015259.94433594"	"HCD"	"MS2"	"9.949762"	"162.6"	"100.000"	"62.3561"	"19915"	"19915"	"19891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"218.8"	""	"225.0"	""	"230.8"	""	"266.7"	"3.8"	"306.6"	"289.3"	""	"537"	"45"	"34.000"	"27.000"	"0.000779730082723706"	""	"0"	"0.0001746"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVLLVFANK"	"[R].dAVLLVFANk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61206; P84079; P84083"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"516.65656"	"1547.95511"	"1547.95614"	"-0.66"	"-0.00034"	"12/74"	"12"	"74"	"10671175.8646851"	"HCD"	"MS2"	"5.808072"	"239.1"	"100.000"	"68.6082"	"22459"	"22459"	"22442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.6"	""	"335.2"	""	"350.9"	""	"413.4"	""	"460.0"	"426.7"	""	"537"	"48"	"34.000"	"27.000"	"0.000442531602124599"	"22"	"0"	"8.112E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVLLVFANK"	"[R].dAVLLVFANk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61206; P84079; P84083"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"516.65662"	"1547.95530"	"1547.95614"	"-0.54"	"-0.00028"	"12/74"	"12"	"74"	"10613831.5003662"	"HCD"	"MS2"	"5.051896"	"162.7"	"70.339"	"68.7408"	"22461"	"22461"	"22442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.5"	""	"222.1"	""	"228.8"	""	"270.2"	"0.6"	"330.2"	"297.9"	""	"537"	"50"	"34.000"	"27.000"	"0.000280507378860785"	"23"	"0"	"0.0001037"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQNVFEVK"	"[K].lIQNVFEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"774.48138"	"1547.95549"	"1547.95614"	"-0.42"	"-0.00032"	"8/76"	"8"	"76"	"2049016.12939453"	"HCD"	"MS2"	"11.36467"	"150.5"	"100.000"	"62.2587"	"19822"	"19822"	"19801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"206.6"	""	"207.6"	""	"203.8"	""	"242.8"	"1.8"	"288.7"	"275.2"	""	"530"	"44"	"34.000"	"27.000"	"0.000975541780152707"	"27"	"0"	"9.654E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVLLVFANK"	"[R].dAVLLVFANk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61206; P84079; P84083"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"516.65680"	"1547.95584"	"1547.95614"	"-0.19"	"-0.00010"	"12/74"	"12"	"74"	"6884546.4329834"	"HCD"	"MS2"	"10.52589"	"149.3"	"100.000"	"68.3222"	"22342"	"22342"	"22314"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.7"	""	"215.2"	""	"216.1"	""	"261.7"	"1.6"	"288.2"	"259.1"	""	"524"	"52"	"34.000"	"27.000"	"0.000171910059771361"	"24"	"0"	"7.841E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVLLVFANK"	"[R].dAVLLVFANk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61206; P84079; P84083"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"774.48157"	"1547.95586"	"1547.95614"	"-0.18"	"-0.00014"	"16/74"	"16"	"74"	"4594234.22955322"	"HCD"	"MS2"	"7.021297"	"282.4"	"100.000"	"68.3455"	"22351"	"22351"	"22330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"337.7"	""	"413.4"	""	"420.4"	""	"488.6"	""	"542.2"	"476.2"	""	"524"	"61"	"34.000"	"27.000"	"2.06681350816061E-05"	"24"	"0"	"3.062E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVLLVFANK"	"[R].dAVLLVFANk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61206; P84079; P84083"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"774.48157"	"1547.95586"	"1547.95614"	"-0.18"	"-0.00014"	"8/74"	"8"	"74"	"4191941.17352295"	"HCD"	"MS2"	"0"	"259.9"	"100.000"	"68.6474"	"22475"	"22475"	"22458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"316.6"	""	"342.2"	""	"384.5"	""	"438.6"	"0.6"	"508.3"	"473.3"	""	"524"	"55"	"34.000"	"27.000"	"8.81660311763786E-05"	"24"	"0"	"5.92E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVLLVFANK"	"[R].dAVLLVFANk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61206; P84079; P84083"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"774.48181"	"1547.95635"	"1547.95614"	"0.14"	"0.00011"	"16/74"	"16"	"74"	"5188325.04016113"	"HCD"	"MS2"	"0"	"327.5"	"94.729"	"68.7385"	"22460"	"22460"	"22442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"380.5"	""	"456.9"	""	"492.6"	""	"523.4"	""	"661.2"	"595.0"	""	"516"	"63"	"34.000"	"27.000"	"1.20953852593478E-05"	"25"	"0"	"4.128E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVLLVFANK"	"[R].dAVLLVFANk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61206; P84079; P84083"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"516.65704"	"1547.95658"	"1547.95614"	"0.29"	"0.00015"	"12/74"	"12"	"74"	"7636557.41717529"	"HCD"	"MS2"	"10.25859"	"169.2"	"100.000"	"68.4503"	"22343"	"22343"	"22314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"208.6"	""	"246.3"	""	"241.4"	""	"300.2"	""	"324.5"	"284.7"	""	"518"	"44"	"34.000"	"27.000"	"0.000940372161854563"	"21"	"0"	"6.552E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVLLVFANK"	"[R].dAVLLVFANk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61206; P84079; P84083"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"774.48212"	"1547.95696"	"1547.95614"	"0.53"	"0.00041"	"16/74"	"16"	"74"	"3517988.83544922"	"HCD"	"MS2"	"4.960252"	"230.7"	"100.000"	"68.4434"	"22340"	"22340"	"22314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"277.2"	""	"342.4"	""	"312.0"	""	"416.1"	"1.8"	"453.8"	"384.0"	""	"509"	"59"	"34.000"	"27.000"	"3.47286408261881E-05"	"26"	"0"	"2.628E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].IMNTFSVVPSPk.[V]"	"K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.93811"	"1548.86894"	"1548.86572"	"2.08"	"0.00161"	"6/118"	"6"	"118"	"1084310.8470459"	"HCD"	"MS2"	"0"	"68.6"	"100.000"	"46.5118"	"13468"	"13468"	"13443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.6"	""	"93.1"	""	"95.7"	""	"121.7"	"1.0"	"125.2"	"110.2"	""	"1095"	"30"	"37.000"	"30.000"	"0.0492474925887694"	"14"	"0.002099"	"0.03202"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALLVYDITR"	"[R].gAAGALLVYDITR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"516.96844"	"1548.89078"	"1548.89471"	"-2.54"	"-0.00131"	"16/100"	"16"	"100"	"6122219.64904785"	"HCD"	"MS2"	"45.0453"	"89.4"	"100.000"	"59.8274"	"18883"	"18883"	"18853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.3"	""	"125.8"	""	"135.2"	""	"154.4"	"0.7"	"160.4"	"155.0"	""	"1012"	"35"	"37.000"	"30.000"	"0.0175853297690262"	"17"	"7.476E-05"	"0.0002022"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALLVYDITR"	"[R].gAAGALLVYDITR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"774.94958"	"1548.89189"	"1548.89471"	"-1.82"	"-0.00141"	"10/100"	"10"	"100"	"2012786.32354736"	"HCD"	"MS2"	"11.61594"	"130.3"	"100.000"	"60.1564"	"19017"	"19017"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.5"	""	"155.2"	""	"189.9"	""	"226.2"	"2.9"	"244.6"	"262.7"	""	"1005"	"62"	"37.000"	"30.000"	"2.97259721173176E-05"	"24"	"0"	"2.468E-06"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALLVYDITR"	"[R].gAAGALLVYDITR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"774.95050"	"1548.89372"	"1548.89471"	"-0.64"	"-0.00049"	"10/100"	"10"	"100"	"4366426.1060791"	"HCD"	"MS2"	"8.354791"	"228.5"	"100.000"	"59.8436"	"18889"	"18889"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.4"	""	"277.7"	""	"307.2"	""	"412.8"	"1.6"	"433.8"	"455.5"	""	"967"	"81"	"36.000"	"29.000"	"3.68465201347286E-07"	"23"	"0"	"1.221E-06"	"1.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALLVYDITR"	"[R].gAAGALLVYDITR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"516.96954"	"1548.89408"	"1548.89471"	"-0.41"	"-0.00021"	"15/100"	"15"	"100"	"8039492.6796875"	"HCD"	"MS2"	"24.62099"	"121.6"	"100.000"	"59.7240"	"18787"	"18787"	"18761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.8"	"2.5"	"168.0"	""	"184.9"	""	"207.0"	""	"225.4"	"218.2"	""	"972"	"26"	"36.000"	"29.000"	"0.111850072326054"	"22"	"0"	"0.0001537"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALLVYDITR"	"[R].gAAGALLVYDITR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"2"	"2"	"0.9012"	"0.0000"	"1"	"1"	"1"	"774.95093"	"1548.89458"	"1548.89471"	"-0.08"	"-0.00006"	"10/100"	"10"	"100"	"2440497.47747803"	"HCD"	"MS2"	"0"	"143.8"	"100.000"	"59.9792"	"18891"	"18891"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.2"	""	"180.9"	""	"192.0"	""	"250.3"	""	"267.0"	"287.6"	""	"930"	"81"	"36.000"	"29.000"	"3.98522598032122E-07"	"26"	"0"	"4.474E-07"	"1.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGVGGFLPAMK"	"[R].gGGVGGFLPAMk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"516.96973"	"1548.89463"	"1548.89724"	"-1.69"	"-0.00087"	"10/90"	"10"	"90"	"8382453.49963379"	"HCD"	"MS2"	"7.250454"	"256.7"	"100.000"	"52.8300"	"15995"	"15995"	"15970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"297.8"	""	"291.0"	""	"318.6"	""	"442.1"	"24.1"	"516.0"	"548.7"	""	"930"	"9"	"36.000"	"29.000"	"5.55204468575887"	"20"	"0.0003839"	"0.002097"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALLVYDITR"	"[R].gAAGALLVYDITR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"2"	"2"	"0.9103"	"0.0000"	"1"	"1"	"1"	"774.95099"	"1548.89470"	"1548.89471"	"0.00"	"0.00000"	"11/100"	"11"	"100"	"3543327.63287354"	"HCD"	"MS2"	"12.19434"	"189.2"	"100.000"	"59.6687"	"18764"	"18764"	"18745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.8"	""	"252.0"	""	"253.3"	""	"333.6"	""	"350.1"	"371.5"	""	"929"	"78"	"36.000"	"29.000"	"6.91808220596721E-07"	"24"	"0"	"1.15E-06"	"1.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.95953"	"1548.91179"	"1548.91500"	"-2.07"	"-0.00160"	"4/86"	"4"	"86"	"62635.23828125"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"102.5346"	"34740"	"34740"	"34737"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"2.0"	""	"3.1"	""	"7.0"	""	"12.2"	"11.7"	""	"865"	"2"	"36.000"	"29.000"	"30.0598017357155"	"13"	"0.006346"	"0.2289"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"3"	"774.95966"	"1548.91203"	"1548.91500"	"-1.91"	"-0.00148"	"5/86"	"5"	"86"	"107447.267211914"	"HCD"	"MS2"	"33.89306"	"9.1"	"100.000"	"87.5319"	"30156"	"30156"	"30139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"8.9"	""	"11.0"	""	"17.9"	""	"19.4"	"20.9"	""	"863"	"4"	"36.000"	"29.000"	"15.8482312664923"	"13"	"0.003698"	"0.08541"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"774.95990"	"1548.91252"	"1548.91500"	"-1.60"	"-0.00124"	"6/86"	"6"	"86"	"109461.783325195"	"HCD"	"MS2"	"14.60448"	"8.0"	"100.000"	"87.8026"	"30254"	"30254"	"30248"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"12.1"	""	"12.0"	""	"15.1"	""	"13.2"	"16.8"	""	"873"	"10"	"36.000"	"29.000"	"4.31503425817754"	"14"	"0.001966"	"0.0307"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.95996"	"1548.91265"	"1548.91500"	"-1.52"	"-0.00118"	"5/86"	"5"	"86"	"121705.863708496"	"HCD"	"MS2"	"10.61434"	"4.3"	"100.000"	"102.5009"	"34727"	"34727"	"34724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.9"	""	"4.4"	""	"4.0"	""	"8.1"	""	"9.7"	"7.6"	""	"879"	"1"	"36.000"	"29.000"	"37.2356448514792"	"13"	"0.004103"	"0.106"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"774.95996"	"1548.91265"	"1548.91500"	"-1.52"	"-0.00118"	"13/86"	"13"	"86"	"366307.378662109"	"HCD"	"MS2"	"16.24169"	"37.0"	"100.000"	"68.0628"	"22185"	"22185"	"22154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.2"	""	"40.5"	""	"35.9"	""	"71.2"	""	"72.1"	"70.1"	""	"879"	"45"	"36.000"	"29.000"	"0.00143866235399249"	"21"	"0"	"5.79E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"774.96014"	"1548.91301"	"1548.91500"	"-1.28"	"-0.00099"	"5/86"	"5"	"86"	"120277.90057373"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"94.9664"	"32739"	"32739"	"32735"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"9.1"	""	"8.7"	""	"14.2"	""	"13.4"	"11.1"	""	"854"	"24"	"36.000"	"29.000"	"0.164978699202088"	"21"	"0.00286"	"0.04887"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96014"	"1548.91301"	"1548.91500"	"-1.28"	"-0.00099"	"5/86"	"5"	"86"	"168924.350769043"	"HCD"	"MS2"	"22.49647"	"14.0"	"100.000"	"80.2002"	"27178"	"27178"	"27151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.1"	""	"14.3"	""	"18.3"	""	"22.1"	""	"29.1"	"33.0"	""	"854"	"14"	"36.000"	"29.000"	"1.71564676232497"	"14"	"0.0005564"	"0.003571"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96021"	"1548.91313"	"1548.91500"	"-1.20"	"-0.00093"	"5/86"	"5"	"86"	"68453.7340087891"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"101.5618"	"34531"	"34531"	"34528"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.0"	""	"4.4"	""	"6.0"	""	"7.9"	""	"8.6"	"9.5"	""	"853"	"3"	"36.000"	"29.000"	"19.7205505626785"	"13"	"0.003107"	"0.05897"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"774.96027"	"1548.91326"	"1548.91500"	"-1.13"	"-0.00087"	"8/86"	"8"	"86"	"725666.677978516"	"HCD"	"MS2"	"23.03675"	"72.0"	"100.000"	"58.5850"	"18327"	"18327"	"18297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.4"	""	"83.4"	""	"95.7"	""	"125.2"	"1.2"	"146.6"	"143.2"	""	"853"	"47"	"36.000"	"29.000"	"0.000889035361640994"	"20"	"0"	"3.065E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"516.97595"	"1548.91330"	"1548.91500"	"-1.09"	"-0.00057"	"12/86"	"12"	"86"	"34058512.7210693"	"HCD"	"MS2"	"12.41276"	"502.3"	"64.308"	"51.7208"	"15541"	"15541"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"548.6"	""	"472.9"	""	"528.9"	""	"1097.5"	""	"1108.9"	"1022.5"	""	"853"	"57"	"36.000"	"29.000"	"9.03481024183487E-05"	""	"0"	"0.0001831"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96045"	"1548.91362"	"1548.91500"	"-0.89"	"-0.00069"	"4/86"	"4"	"86"	"73190.2912597656"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"98.3907"	"33716"	"33716"	"33711"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.7"	""	"3.3"	""	"6.9"	""	"8.8"	""	"12.1"	"10.4"	""	"851"	"12"	"36.000"	"29.000"	"2.50552975353803"	"13"	"0.007565"	"0.2959"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"774.96045"	"1548.91362"	"1548.91500"	"-0.89"	"-0.00069"	"5/86"	"5"	"86"	"83085.9865112305"	"HCD"	"MS2"	"12.18555"	"6.0"	"100.000"	"94.4283"	"32572"	"32572"	"32564"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.4"	""	"5.2"	""	"8.2"	""	"11.1"	""	"11.8"	"11.3"	""	"851"	"6"	"36.000"	"29.000"	"10.4207640940494"	"18"	"0.002925"	"0.05033"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"774.96045"	"1548.91362"	"1548.91500"	"-0.89"	"-0.00069"	"9/86"	"9"	"86"	"10375831.2420044"	"HCD"	"MS2"	"9.478425"	"761.1"	"100.000"	"48.8059"	"14359"	"14359"	"14335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"787.3"	""	"722.4"	""	"770.2"	""	"1661.4"	""	"1670.2"	"1634.5"	""	"851"	"61"	"36.000"	"29.000"	"3.5147914754509E-05"	"27"	"0"	"9.9E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"516.97607"	"1548.91367"	"1548.91500"	"-0.86"	"-0.00044"	"12/86"	"12"	"86"	"10873351.8758545"	"HCD"	"MS2"	"7.911077"	"214.2"	"76.562"	"49.3018"	"14609"	"14609"	"14590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"238.2"	"2.5"	"202.1"	""	"226.2"	""	"426.0"	""	"484.0"	"462.3"	""	"851"	"46"	"36.000"	"29.000"	"0.00101835585435049"	"22"	"7.476E-05"	"0.000201"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"774.96057"	"1548.91387"	"1548.91500"	"-0.73"	"-0.00057"	"9/86"	"9"	"86"	"1371011368.09375"	"HCD"	"MS2"	"0"	"440.1"	"0.448"	"50.1043"	"14933"	"14933"	"14919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"484.6"	""	"417.2"	""	"455.8"	""	"945.3"	"3.7"	"953.9"	"923.5"	""	"851"	"63"	"36.000"	"29.000"	"1.90502010927042E-05"	"28"	"0.0001889"	"0.00105"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"516.97614"	"1548.91385"	"1548.91500"	"-0.74"	"-0.00038"	"8/86"	"8"	"86"	"6676499.19085693"	"HCD"	"MS2"	"16.83069"	"181.0"	"100.000"	"51.6102"	"15546"	"15546"	"15526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.6"	""	"197.3"	""	"202.3"	""	"357.0"	""	"375.4"	"376.5"	""	"851"	"62"	"36.000"	"29.000"	"2.69091242760581E-05"	"29"	"0"	"4.053E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"516.97614"	"1548.91385"	"1548.91500"	"-0.74"	"-0.00038"	"8/86"	"8"	"86"	"248490088.994141"	"HCD"	"MS2"	"25.44829"	"926.9"	"14.626"	"49.8613"	"14833"	"14833"	"14814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1006.3"	""	"892.0"	""	"982.4"	""	"2027.1"	""	"1997.8"	"1907.4"	""	"851"	"64"	"36.000"	"29.000"	"1.56999968191599E-05"	""	"0.0001308"	"0.0002518"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"774.96063"	"1548.91399"	"1548.91500"	"-0.65"	"-0.00051"	"7/86"	"7"	"86"	"72972.6334838867"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"94.1558"	"32474"	"32474"	"32460"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.5"	""	"6.1"	""	"7.1"	""	"13.1"	""	"7.0"	"15.6"	""	"851"	"15"	"36.000"	"29.000"	"1.35175991706148"	"15"	"0.001966"	"0.02848"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96063"	"1548.91399"	"1548.91500"	"-0.65"	"-0.00051"	"4/86"	"4"	"86"	"79129.3245849609"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"92.0743"	"31787"	"31787"	"31783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"6.9"	""	"8.7"	""	"13.0"	""	"14.4"	"14.9"	""	"851"	"1"	"36.000"	"29.000"	"37.7484883122152"	"13"	"0.008433"	"0.3576"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"774.96063"	"1548.91399"	"1548.91500"	"-0.65"	"-0.00051"	"7/86"	"7"	"86"	"151597.271179199"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"83.6031"	"28566"	"28566"	"28539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.5"	""	"13.3"	""	"15.4"	""	"26.2"	""	"28.1"	"27.7"	""	"851"	"11"	"36.000"	"29.000"	"3.08247501011909"	"14"	"0.001058"	"0.01386"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96063"	"1548.91399"	"1548.91500"	"-0.65"	"-0.00051"	"4/86"	"4"	"86"	"91734.1468505859"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"102.2177"	"34667"	"34667"	"34660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.7"	""	"5.6"	""	"7.0"	""	"7.5"	""	"8.7"	"10.5"	""	"851"	"1"	"36.000"	"29.000"	"36.7197372074846"	"13"	"0.006657"	"0.2454"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96063"	"1548.91399"	"1548.91500"	"-0.65"	"-0.00051"	"6/86"	"6"	"86"	"150079.069641113"	"HCD"	"MS2"	"10.34618"	"5.4"	"100.000"	"95.9604"	"33017"	"33017"	"33011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.1"	""	"4.6"	""	"5.9"	""	"9.7"	""	"12.6"	"13.9"	""	"851"	"10"	"36.000"	"29.000"	"4.65478433848776"	"13"	"0.003286"	"0.07222"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"774.96069"	"1548.91411"	"1548.91500"	"-0.57"	"-0.00044"	"5/86"	"5"	"86"	"75673.8834228516"	"HCD"	"MS2"	"9.38113"	"5.3"	"100.000"	"98.3201"	"33699"	"33699"	"33695"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"3.9"	""	"7.4"	""	"12.0"	""	"8.7"	"12.3"	""	"851"	"2"	"36.000"	"29.000"	"28.7673306029288"	"14"	"0.005698"	"0.1856"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"3"	"774.96075"	"1548.91423"	"1548.91500"	"-0.50"	"-0.00038"	"5/86"	"5"	"86"	"109522.052246094"	"HCD"	"MS2"	"12.0043"	"8.6"	"100.000"	"88.2685"	"30386"	"30386"	"30376"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"8.1"	""	"10.6"	""	"16.6"	""	"18.9"	"18.4"	""	"851"	"7"	"36.000"	"29.000"	"9.35189375869943"	"14"	"0.002165"	"0.03246"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"516.97626"	"1548.91422"	"1548.91500"	"-0.50"	"-0.00026"	"8/86"	"8"	"86"	"12323849.2034912"	"HCD"	"MS2"	"4.146911"	"195.9"	"57.862"	"48.9947"	"14436"	"14436"	"14415"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.4"	""	"186.7"	""	"209.5"	""	"396.9"	"1.7"	"439.0"	"437.2"	""	"851"	"56"	"36.000"	"29.000"	"0.000116118004658482"	"26"	"0"	"0.0001665"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96082"	"1548.91435"	"1548.91500"	"-0.42"	"-0.00032"	"4/86"	"4"	"86"	"70287.411315918"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"99.8322"	"34130"	"34130"	"34128"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.8"	""	"6.6"	""	"5.7"	""	"10.9"	""	"11.3"	"12.0"	""	"848"	"8"	"36.000"	"29.000"	"6.8134309127746"	"13"	"0.004346"	"0.1235"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"774.96082"	"1548.91435"	"1548.91500"	"-0.42"	"-0.00032"	"6/86"	"6"	"86"	"118130.046569824"	"HCD"	"MS2"	"25.67181"	"10.3"	"100.000"	"85.4315"	"29311"	"29311"	"29282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.4"	""	"11.5"	""	"12.2"	""	"18.0"	""	"22.0"	"22.6"	""	"848"	"9"	"36.000"	"29.000"	"5.89339915634462"	"14"	"0.002361"	"0.03501"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"774.96082"	"1548.91435"	"1548.91500"	"-0.42"	"-0.00032"	"9/86"	"9"	"86"	"12470921.9816895"	"HCD"	"MS2"	"0"	"511.5"	"59.020"	"51.2880"	"15415"	"15415"	"15398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"541.2"	""	"486.3"	""	"556.5"	""	"1073.6"	"8.2"	"1123.9"	"1074.1"	""	"848"	"61"	"36.000"	"29.000"	"3.45434616424836E-05"	"28"	"0"	"5.992E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"774.96088"	"1548.91448"	"1548.91500"	"-0.34"	"-0.00026"	"3/86"	"3"	"86"	"73335.5739135742"	"HCD"	"MS2"	"10.12569"	"5.0"	"100.000"	"97.1691"	"33372"	"33372"	"33368"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"5.7"	""	"4.6"	""	"11.6"	""	"8.2"	"12.5"	""	"827"	"6"	"36.000"	"29.000"	"10.6530879842056"	"15"	"0.003013"	"0.05811"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96088"	"1548.91448"	"1548.91500"	"-0.34"	"-0.00026"	"4/86"	"4"	"86"	"92312.6229858398"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"99.5435"	"34042"	"34042"	"34036"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.2"	""	"3.4"	""	"3.5"	""	"9.4"	""	"9.7"	"10.7"	""	"827"	"1"	"36.000"	"29.000"	"36.0143444446839"	"13"	"0.003788"	"0.09105"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"774.96088"	"1548.91448"	"1548.91500"	"-0.34"	"-0.00026"	"5/86"	"5"	"86"	"97064.1106567383"	"HCD"	"MS2"	"9.891388"	"6.9"	"100.000"	"89.0312"	"30717"	"30717"	"30710"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.6"	""	"6.9"	""	"10.0"	""	"11.8"	""	"16.1"	"13.1"	""	"827"	"5"	"36.000"	"29.000"	"12.2595777956832"	"14"	"0.003788"	"0.09127"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96088"	"1548.91448"	"1548.91500"	"-0.34"	"-0.00026"	"6/86"	"6"	"86"	"108856.011474609"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"107.0232"	"35586"	"35586"	"35583"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"3.2"	""	"7.2"	""	"8.6"	""	"8.2"	"6.7"	""	"827"	"14"	"36.000"	"29.000"	"1.67677779407907"	"13"	"0.001058"	"0.01439"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"516.97638"	"1548.91458"	"1548.91500"	"-0.27"	"-0.00014"	"8/86"	"8"	"86"	"859991247.378906"	"HCD"	"MS2"	"3.692157"	"231.0"	"1.124"	"50.4318"	"15065"	"15065"	"15048"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.3"	""	"219.8"	""	"250.0"	""	"492.3"	"0.4"	"490.2"	"506.9"	""	"827"	"60"	"36.000"	"29.000"	"4.16366245070221E-05"	"28"	"0.0001889"	"0.0004199"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"516.97638"	"1548.91458"	"1548.91500"	"-0.27"	"-0.00014"	"8/86"	"8"	"86"	"1182690595.48438"	"HCD"	"MS2"	"4.013144"	"334.3"	"1.130"	"50.1295"	"14943"	"14943"	"14932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"364.3"	""	"310.5"	""	"378.6"	""	"687.5"	""	"731.4"	"706.2"	""	"827"	"65"	"36.000"	"29.000"	"1.29860034491782E-05"	"29"	"0.0002277"	"0.001139"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96094"	"1548.91460"	"1548.91500"	"-0.26"	"-0.00020"	"4/86"	"4"	"86"	"84011.1180419922"	"HCD"	"MS2"	"16.64252"	"5.1"	"100.000"	"98.1319"	"33646"	"33646"	"33642"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.4"	""	"7.2"	""	"7.6"	""	"6.3"	""	"11.4"	"11.1"	""	"827"	"1"	"36.000"	"29.000"	"30.8656561602562"	"13"	"0.006187"	"0.2239"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"774.96094"	"1548.91460"	"1548.91500"	"-0.26"	"-0.00020"	"5/86"	"5"	"86"	"84245.7747192383"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"94.8712"	"32695"	"32695"	"32686"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.6"	""	"6.1"	""	"7.2"	""	"10.2"	""	"11.1"	"11.4"	""	"827"	"4"	"36.000"	"29.000"	"15.2221330601187"	"13"	"0.001912"	"0.02689"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96094"	"1548.91460"	"1548.91500"	"-0.26"	"-0.00020"	"6/86"	"6"	"86"	"92941.201965332"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"101.2417"	"34466"	"34466"	"34462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.7"	""	"6.6"	""	"4.3"	""	"6.3"	""	"7.9"	"7.5"	""	"827"	"10"	"36.000"	"29.000"	"4.08766704640644"	"13"	"0.0006737"	"0.006641"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8226"	"0.0000"	"1"	"1"	"1"	"774.96094"	"1548.91460"	"1548.91500"	"-0.26"	"-0.00020"	"9/86"	"9"	"86"	"1467559.05352783"	"HCD"	"MS2"	"21.4776"	"126.2"	"100.000"	"54.8243"	"16789"	"16789"	"16764"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.8"	""	"131.2"	""	"143.1"	""	"261.2"	"2.8"	"264.6"	"273.1"	""	"827"	"62"	"36.000"	"29.000"	"2.47443194557442E-05"	"27"	"0"	"1.621E-05"	"1.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"774.96100"	"1548.91472"	"1548.91500"	"-0.18"	"-0.00014"	"6/86"	"6"	"86"	"102971.780334473"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"88.6181"	"30523"	"30523"	"30510"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"7.3"	""	"10.0"	""	"15.8"	""	"12.9"	"18.0"	""	"826"	"10"	"36.000"	"29.000"	"4.33461023033409"	"14"	"0.0008731"	"0.008836"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96100"	"1548.91472"	"1548.91500"	"-0.18"	"-0.00014"	"5/86"	"5"	"86"	"94091.2144775391"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"119.5975"	"37693"	"37693"	"37691"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.9"	""	"5.1"	""	"3.5"	""	"8.3"	""	"8.2"	"8.0"	""	"826"	"1"	"36.000"	"29.000"	"30.8283337223357"	"13"	"0.005008"	"0.1514"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"774.96100"	"1548.91472"	"1548.91500"	"-0.18"	"-0.00014"	"9/86"	"9"	"86"	"24969356.4567871"	"HCD"	"MS2"	"0"	"722.7"	"42.267"	"51.9878"	"15651"	"15651"	"15634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"511.6"	""	"408.8"	""	"638.5"	""	"1139.4"	"12.9"	"2695.3"	"1522.1"	""	"826"	"64"	"36.000"	"29.000"	"1.75367879909827E-05"	"29"	"0"	"8.386E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8088"	"0.0000"	"1"	"1"	"1"	"516.97644"	"1548.91477"	"1548.91500"	"-0.15"	"-0.00008"	"8/86"	"8"	"86"	"42051300.5891113"	"HCD"	"MS2"	"4.036937"	"233.7"	"22.598"	"51.0211"	"15305"	"15305"	"15286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"233.7"	""	"239.7"	""	"248.8"	""	"458.0"	"5.4"	"535.8"	"502.7"	""	"826"	"68"	"36.000"	"29.000"	"6.90160423710323E-06"	""	"0"	"0.0001059"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"516.97644"	"1548.91477"	"1548.91500"	"-0.15"	"-0.00008"	"8/86"	"8"	"86"	"1032418292.61328"	"HCD"	"MS2"	"4.201509"	"305.5"	"1.155"	"49.9034"	"14804"	"14804"	"14788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.8"	"2.1"	"286.5"	""	"317.7"	""	"664.9"	""	"666.2"	"648.7"	""	"826"	"63"	"36.000"	"29.000"	"2.28533595106099E-05"	"28"	"0.0001889"	"0.000621"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"516.97644"	"1548.91477"	"1548.91500"	"-0.15"	"-0.00008"	"8/86"	"8"	"86"	"25705582.4764404"	"HCD"	"MS2"	"4.172383"	"196.7"	"31.185"	"52.0270"	"15667"	"15667"	"15650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.5"	""	"120.5"	""	"181.5"	""	"309.9"	""	"723.1"	"416.4"	""	"826"	"60"	"36.000"	"29.000"	"4.22620005811951E-05"	"28"	"0"	"7.394E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96106"	"1548.91484"	"1548.91500"	"-0.10"	"-0.00008"	"3/86"	"3"	"86"	"97589.5825195313"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"106.2965"	"35452"	"35452"	"35448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.5"	""	"3.1"	""	"5.5"	""	"7.7"	""	"11.2"	"8.9"	""	"826"	"6"	"36.000"	"29.000"	"9.79377340438263"	"13"	"0.005886"	"0.1933"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"774.96112"	"1548.91496"	"1548.91500"	"-0.02"	"-0.00002"	"3/86"	"3"	"86"	"69112.1951293945"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"97.0656"	"33335"	"33335"	"33329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"4.6"	""	"5.1"	""	"11.3"	""	"11.7"	"11.4"	""	"826"	"6"	"36.000"	"29.000"	"10.1847424627778"	"14"	"0.00274"	"0.04266"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"774.96112"	"1548.91496"	"1548.91500"	"-0.02"	"-0.00002"	"13/86"	"13"	"86"	"263242.628479004"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"76.1087"	"25516"	"25516"	"25487"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.2"	""	"20.5"	""	"24.6"	""	"41.1"	""	"47.1"	"48.4"	""	"826"	"26"	"36.000"	"29.000"	"0.0981635038376074"	"20"	"0.0001889"	"0.001052"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"774.96112"	"1548.91496"	"1548.91500"	"-0.02"	"-0.00002"	"9/86"	"9"	"86"	"6044459.27398682"	"HCD"	"MS2"	"0"	"439.5"	"100.000"	"51.6007"	"15543"	"15543"	"15526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"470.4"	""	"410.6"	""	"478.3"	""	"915.1"	"3.1"	"956.3"	"945.4"	""	"826"	"61"	"36.000"	"29.000"	"3.36472869300607E-05"	"27"	"0"	"6.811E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8308"	"0.0000"	"1"	"1"	"1"	"774.96118"	"1548.91509"	"1548.91500"	"0.06"	"0.00004"	"9/86"	"9"	"86"	"3471338.3638916"	"HCD"	"MS2"	"2.127893"	"278.0"	"100.000"	"49.1073"	"14482"	"14482"	"14463"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"311.2"	""	"255.9"	""	"313.1"	""	"543.9"	""	"613.8"	"607.5"	""	"826"	"65"	"36.000"	"29.000"	"1.24150951298546E-05"	"28"	"0"	"2.993E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"774.96118"	"1548.91509"	"1548.91500"	"0.06"	"0.00004"	"9/86"	"9"	"86"	"1296757328.07031"	"HCD"	"MS2"	"0"	"437.8"	"0.470"	"49.8663"	"14789"	"14789"	"14778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"459.7"	""	"411.0"	""	"481.5"	""	"915.7"	"0.2"	"970.5"	"924.7"	""	"826"	"61"	"36.000"	"29.000"	"3.2281228329498E-05"	"28"	"0.0001889"	"0.000905"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"774.96118"	"1548.91509"	"1548.91500"	"0.06"	"0.00004"	"9/86"	"9"	"86"	"5948528.80639648"	"HCD"	"MS2"	"0"	"449.4"	"100.000"	"51.3662"	"15396"	"15396"	"15378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"468.0"	""	"433.5"	""	"489.6"	""	"921.4"	"9.7"	"979.4"	"972.2"	""	"826"	"63"	"36.000"	"29.000"	"1.95861939912481E-05"	"28"	"0"	"6.749E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7969"	"0.0000"	"1"	"1"	"1"	"516.97656"	"1548.91513"	"1548.91500"	"0.09"	"0.00005"	"8/86"	"8"	"86"	"6047475.75177002"	"HCD"	"MS2"	"16.97726"	"170.0"	"100.000"	"51.4125"	"15415"	"15415"	"15394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.7"	""	"167.4"	""	"181.5"	""	"339.9"	""	"375.6"	"356.4"	""	"824"	"64"	"36.000"	"29.000"	"1.46857866971612E-05"	""	"0"	"0.0001424"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96124"	"1548.91521"	"1548.91500"	"0.14"	"0.00010"	"5/86"	"5"	"86"	"140096.907226563"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"119.0930"	"37588"	"37588"	"37583"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"3.2"	""	"4.9"	""	"8.2"	""	"5.6"	"7.8"	""	"824"	"1"	"36.000"	"29.000"	"33.2580832462521"	"13"	"0.002953"	"0.05124"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"516.97662"	"1548.91532"	"1548.91500"	"0.21"	"0.00011"	"8/86"	"8"	"86"	"46751243.630127"	"HCD"	"MS2"	"4.267616"	"231.2"	"19.660"	"50.7750"	"15155"	"15155"	"15138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"238.2"	""	"243.9"	""	"250.0"	""	"467.2"	""	"515.2"	"485.4"	""	"822"	"65"	"36.000"	"29.000"	"1.30569524303705E-05"	"29"	"0"	"0.0001138"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"516.97662"	"1548.91532"	"1548.91500"	"0.21"	"0.00011"	"8/86"	"8"	"86"	"457354439.320313"	"HCD"	"MS2"	"3.808887"	"289.8"	"2.599"	"50.4627"	"15027"	"15027"	"15015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.7"	""	"262.6"	""	"302.7"	""	"613.9"	"4.5"	"641.8"	"629.4"	""	"822"	"58"	"36.000"	"29.000"	"6.23507701025788E-05"	"27"	"0.0001859"	"0.0003532"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"516.97662"	"1548.91532"	"1548.91500"	"0.21"	"0.00011"	"8/86"	"8"	"86"	"41008709.6035156"	"HCD"	"MS2"	"12.78609"	"408.8"	"45.462"	"51.9238"	"15674"	"15674"	"15654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"446.7"	""	"388.0"	""	"426.7"	""	"873.0"	"0.1"	"907.5"	"845.4"	""	"822"	"62"	"36.000"	"29.000"	"2.61121012991067E-05"	"29"	"0"	"0.0001269"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"774.96130"	"1548.91533"	"1548.91500"	"0.21"	"0.00017"	"9/86"	"9"	"86"	"63793208.8081055"	"HCD"	"MS2"	"0"	"556.0"	"12.747"	"50.9752"	"15287"	"15287"	"15270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"573.8"	""	"555.4"	""	"593.0"	""	"1102.4"	"6.3"	"1246.3"	"1212.3"	""	"822"	"63"	"36.000"	"29.000"	"1.85712793138093E-05"	"28"	"0.0001308"	"0.0002447"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"774.96136"	"1548.91545"	"1548.91500"	"0.29"	"0.00023"	"9/86"	"9"	"86"	"11281475.87854"	"HCD"	"MS2"	"0"	"816.2"	"100.000"	"51.0531"	"15268"	"15268"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"845.3"	""	"787.2"	""	"875.9"	""	"1734.3"	"1.5"	"1774.5"	"1742.2"	""	"822"	"61"	"36.000"	"29.000"	"2.96375173944172E-05"	"26"	"0"	"6.757E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"516.97668"	"1548.91550"	"1548.91500"	"0.32"	"0.00017"	"8/86"	"8"	"86"	"497181449.566406"	"HCD"	"MS2"	"4.385121"	"318.4"	"2.651"	"50.7021"	"15175"	"15175"	"15162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.5"	""	"280.9"	""	"342.0"	""	"654.3"	"0.2"	"726.2"	"684.0"	""	"822"	"63"	"36.000"	"29.000"	"2.29531250036837E-05"	"28"	"0.0001859"	"0.0003636"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"774.96143"	"1548.91557"	"1548.91500"	"0.37"	"0.00029"	"3/86"	"3"	"86"	"71408.7808227539"	"HCD"	"MS2"	"11.31905"	"5.5"	"100.000"	"96.8566"	"33280"	"33280"	"33271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"3.5"	""	"7.9"	""	"11.3"	""	"10.3"	"11.9"	""	"823"	"7"	"36.000"	"29.000"	"7.62728263035195"	"17"	"0.003197"	"0.06521"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"774.96143"	"1548.91557"	"1548.91500"	"0.37"	"0.00029"	"5/86"	"5"	"86"	"123651.240783691"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"110.7295"	"36223"	"36223"	"36219"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"1.4"	""	"5.7"	""	"6.0"	""	"7.3"	"9.7"	""	"823"	"6"	"36.000"	"29.000"	"9.40523907588989"	"13"	"0.004631"	"0.1335"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"774.96149"	"1548.91570"	"1548.91500"	"0.45"	"0.00035"	"5/86"	"5"	"86"	"86321.3834838867"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"91.9796"	"31733"	"31733"	"31726"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.3"	""	"7.4"	""	"8.3"	""	"10.0"	""	"13.4"	"12.6"	""	"823"	"8"	"36.000"	"29.000"	"5.93430467152483"	"16"	"0.003635"	"0.08377"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"774.96149"	"1548.91570"	"1548.91500"	"0.45"	"0.00035"	"10/86"	"10"	"86"	"195287.030212402"	"HCD"	"MS2"	"31.31086"	"17.2"	"100.000"	"79.8930"	"27053"	"27053"	"27023"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.7"	""	"16.0"	""	"23.8"	""	"33.0"	""	"35.5"	"35.0"	""	"823"	"20"	"36.000"	"29.000"	"0.442965435408677"	"19"	"0.0006037"	"0.004831"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96149"	"1548.91570"	"1548.91500"	"0.45"	"0.00035"	"5/86"	"5"	"86"	"149751.591491699"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"115.7142"	"37025"	"37025"	"37021"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	"4.0"	""	"4.4"	""	"8.7"	""	"6.3"	"6.7"	""	"823"	"1"	"36.000"	"29.000"	"32.5364255421928"	"13"	"0.006502"	"0.2377"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"774.96149"	"1548.91570"	"1548.91500"	"0.45"	"0.00035"	"9/86"	"9"	"86"	"9739667.54156494"	"HCD"	"MS2"	"14.13742"	"684.2"	"100.000"	"49.0812"	"14519"	"14519"	"14495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"754.6"	""	"637.3"	""	"710.6"	""	"1471.3"	""	"1494.3"	"1439.5"	""	"823"	"63"	"36.000"	"29.000"	"1.90269790305796E-05"	"28"	"0"	"9.106E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"516.97681"	"1548.91587"	"1548.91500"	"0.56"	"0.00029"	"8/86"	"8"	"86"	"357387804.888672"	"HCD"	"MS2"	"10.75308"	"821.8"	"8.520"	"49.6229"	"14689"	"14689"	"14671"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"933.7"	""	"773.8"	""	"885.5"	""	"1793.9"	"8.2"	"1776.7"	"1637.5"	""	"809"	"64"	"36.000"	"29.000"	"1.44184483470915E-05"	""	"0.0001889"	"0.0004212"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"774.96161"	"1548.91594"	"1548.91500"	"0.61"	"0.00047"	"7/86"	"7"	"86"	"79565.0830078125"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"99.2622"	"33960"	"33960"	"33955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"5.4"	""	"6.2"	""	"11.9"	""	"13.2"	"14.2"	""	"809"	"17"	"36.000"	"29.000"	"0.841237309933444"	"15"	"0.00103"	"0.01238"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"774.96161"	"1548.91594"	"1548.91500"	"0.61"	"0.00047"	"9/86"	"9"	"86"	"1066477065.07813"	"HCD"	"MS2"	"0.04053134"	"462.4"	"0.606"	"50.3676"	"15039"	"15039"	"15031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"508.0"	""	"421.7"	""	"486.9"	""	"972.9"	"1.0"	"1004.8"	"1001.9"	""	"809"	"62"	"36.000"	"29.000"	"2.79845627736709E-05"	"26"	"0.0001889"	"0.001022"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"774.96161"	"1548.91594"	"1548.91500"	"0.61"	"0.00047"	"9/86"	"9"	"86"	"1042314591.16406"	"HCD"	"MS2"	"0"	"510.9"	"0.659"	"50.1465"	"14900"	"14900"	"14890"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"556.9"	""	"468.7"	""	"547.7"	""	"1111.5"	"2.5"	"1096.2"	"1073.1"	""	"809"	"61"	"36.000"	"29.000"	"3.27279291217655E-05"	"25"	"0.0001889"	"0.0009895"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8281"	"0.0000"	"1"	"1"	"1"	"774.96161"	"1548.91594"	"1548.91500"	"0.61"	"0.00047"	"9/86"	"9"	"86"	"24045505.3372803"	"HCD"	"MS2"	"8.930436"	"765.0"	"48.294"	"51.9143"	"15671"	"15671"	"15654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"874.0"	""	"721.7"	""	"821.1"	""	"1625.4"	"3.1"	"1697.6"	"1529.0"	""	"809"	"64"	"36.000"	"29.000"	"1.71758613616283E-05"	"27"	"0"	"0.0001013"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"774.96167"	"1548.91606"	"1548.91500"	"0.69"	"0.00053"	"9/86"	"9"	"86"	"3454668.90539551"	"HCD"	"MS2"	"4.779697"	"266.8"	"100.000"	"49.3850"	"14643"	"14643"	"14622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"311.6"	""	"260.4"	""	"287.8"	""	"562.2"	""	"571.2"	"544.6"	""	"809"	"63"	"36.000"	"29.000"	"2.09371963524005E-05"	"27"	"0"	"4.077E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"3"	"774.96173"	"1548.91619"	"1548.91500"	"0.77"	"0.00059"	"5/86"	"5"	"86"	"88404.439453125"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"98.0629"	"33630"	"33630"	"33627"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"5.9"	""	"7.4"	""	"11.9"	""	"12.2"	"13.0"	""	"809"	"9"	"36.000"	"29.000"	"4.99940736828304"	"14"	"0.004291"	"0.1135"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"774.96173"	"1548.91619"	"1548.91500"	"0.77"	"0.00059"	"9/86"	"9"	"86"	"23950899.0860596"	"HCD"	"MS2"	"0"	"609.8"	"35.235"	"52.2272"	"15799"	"15799"	"15782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"348.5"	""	"287.0"	""	"505.8"	""	"816.5"	"12.9"	"2697.2"	"1196.9"	""	"809"	"58"	"36.000"	"29.000"	"7.19314021360743E-05"	"28"	"0"	"0.0001291"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7843"	"0.0000"	"1"	"1"	"1"	"516.97693"	"1548.91623"	"1548.91500"	"0.80"	"0.00041"	"12/86"	"12"	"86"	"12175422.4044189"	"HCD"	"MS2"	"24.73223"	"312.7"	"100.000"	"51.0945"	"15285"	"15285"	"15266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"350.9"	""	"355.6"	""	"392.1"	""	"587.7"	"3.1"	"645.2"	"635.5"	""	"809"	"51"	"36.000"	"29.000"	"0.000301938522776871"	"27"	"0"	"0.0001528"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96179"	"1548.91631"	"1548.91500"	"0.84"	"0.00065"	"4/86"	"4"	"86"	"102198.887878418"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"94.5773"	"32595"	"32595"	"32588"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"5.9"	""	"5.9"	""	"13.3"	""	"12.2"	"14.2"	""	"809"	"6"	"36.000"	"29.000"	"9.9751291191129"	"13"	"0.008737"	"0.3829"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"774.96179"	"1548.91631"	"1548.91500"	"0.84"	"0.00065"	"9/86"	"9"	"86"	"60401959.805603"	"HCD"	"MS2"	"0"	"3382.0"	"100.000"	"49.8316"	"14821"	"14821"	"14798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3991.6"	""	"3347.2"	""	"3578.4"	""	"7579.5"	""	"6986.0"	"6885.8"	""	"809"	"63"	"36.000"	"29.000"	"2.17229361631767E-05"	"25"	"0.0001308"	"0.0002513"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"516.97699"	"1548.91642"	"1548.91500"	"0.91"	"0.00047"	"8/86"	"8"	"86"	"22839566.0288086"	"HCD"	"MS2"	"4.934015"	"312.6"	"52.474"	"52.2316"	"15800"	"15800"	"15782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.9"	""	"191.4"	""	"271.4"	""	"499.5"	"3.3"	"1159.3"	"648.4"	""	"814"	"60"	"36.000"	"29.000"	"4.22274065237931E-05"	"28"	"0"	"9.077E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"774.96185"	"1548.91643"	"1548.91500"	"0.92"	"0.00072"	"9/86"	"9"	"86"	"661251120.46875"	"HCD"	"MS2"	"0"	"494.7"	"1.010"	"50.4352"	"15016"	"15016"	"14999"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"533.9"	""	"445.8"	""	"556.2"	""	"1019.9"	"5.0"	"1078.9"	"1064.6"	""	"814"	"61"	"36.000"	"29.000"	"3.2553254178786E-05"	"27"	"0.0001889"	"0.0007752"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"774.96191"	"1548.91655"	"1548.91500"	"1.00"	"0.00078"	"5/86"	"5"	"86"	"87720.1624755859"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"103.1854"	"34878"	"34878"	"34873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"7.6"	""	"7.0"	""	"13.7"	""	"8.1"	"12.1"	""	"814"	"12"	"36.000"	"29.000"	"2.5857968926366"	"22"	"0.002297"	"0.03329"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.96198"	"1548.91667"	"1548.91500"	"1.08"	"0.00084"	"5/86"	"5"	"86"	"77847.0148925781"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"97.8750"	"33576"	"33576"	"33571"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.7"	""	"7.1"	""	"7.7"	""	"11.2"	""	"14.6"	"12.2"	""	"807"	"5"	"36.000"	"29.000"	"13.4228129754131"	"13"	"0.007843"	"0.3174"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"516.97711"	"1548.91678"	"1548.91500"	"1.15"	"0.00059"	"8/86"	"8"	"86"	"743425611.261719"	"HCD"	"MS2"	"3.855776"	"244.7"	"1.394"	"50.1603"	"14905"	"14905"	"14899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.6"	""	"228.1"	""	"256.5"	""	"514.1"	"2.6"	"525.0"	"538.3"	""	"804"	"56"	"36.000"	"29.000"	"9.53292229675985E-05"	"26"	"0.0001889"	"0.001031"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"774.96204"	"1548.91680"	"1548.91500"	"1.16"	"0.00090"	"9/86"	"9"	"86"	"12050446.4179077"	"HCD"	"MS2"	"10.95167"	"854.3"	"100.000"	"51.6794"	"15524"	"15524"	"15506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"980.2"	""	"852.9"	""	"935.1"	""	"1762.3"	"15.7"	"1823.3"	"1748.6"	""	"803"	"62"	"36.000"	"29.000"	"2.75223522920744E-05"	"26"	"0"	"6.804E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"774.96210"	"1548.91692"	"1548.91500"	"1.24"	"0.00096"	"7/86"	"7"	"86"	"218126.731750488"	"HCD"	"MS2"	"50.42412"	"21.0"	"100.000"	"78.6793"	"26558"	"26558"	"26527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.9"	""	"20.8"	""	"22.4"	""	"38.9"	"0.4"	"44.9"	"44.9"	""	"803"	"27"	"36.000"	"29.000"	"0.0793753310504912"	"17"	"0.0002277"	"0.001256"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"774.96210"	"1548.91692"	"1548.91500"	"1.24"	"0.00096"	"10/86"	"10"	"86"	"601963.163635254"	"HCD"	"MS2"	"36.21023"	"35.0"	"100.000"	"84.2713"	"28838"	"28838"	"28817"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.1"	""	"51.2"	""	"42.2"	""	"43.5"	"0.1"	"70.8"	"75.3"	""	"803"	"7"	"36.000"	"29.000"	"7.72121329157429"	"19"	"0.00274"	"0.04291"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"774.96210"	"1548.91692"	"1548.91500"	"1.24"	"0.00096"	"9/86"	"9"	"86"	"631190151.933594"	"HCD"	"MS2"	"0"	"511.9"	"1.104"	"50.6723"	"15163"	"15163"	"15146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"547.5"	""	"485.8"	""	"545.3"	""	"1029.5"	"1.2"	"1148.0"	"1111.8"	""	"803"	"61"	"36.000"	"29.000"	"3.18922786241799E-05"	"23"	"0.0001889"	"0.0007323"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"774.96210"	"1548.91692"	"1548.91500"	"1.24"	"0.00096"	"9/86"	"9"	"86"	"77293669.0981445"	"HCD"	"MS2"	"0"	"557.2"	"9.484"	"50.7359"	"15139"	"15139"	"15122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"568.6"	""	"526.1"	""	"596.6"	""	"1139.2"	"2.8"	"1252.6"	"1214.8"	""	"803"	"66"	"36.000"	"29.000"	"1.06092711606476E-05"	"28"	"0.0001308"	"0.0002742"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"774.96216"	"1548.91704"	"1548.91500"	"1.32"	"0.00102"	"9/86"	"9"	"86"	"123399135.598633"	"HCD"	"MS2"	"0"	"2614.6"	"29.253"	"49.5836"	"14673"	"14673"	"14655"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3001.7"	""	"2578.8"	""	"2790.1"	""	"5868.3"	""	"5459.0"	"5330.4"	""	"801"	"59"	"36.000"	"29.000"	"5.56676028800948E-05"	"24"	"0.0001308"	"0.0002932"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"774.96222"	"1548.91716"	"1548.91500"	"1.40"	"0.00108"	"6/86"	"6"	"86"	"167264.032836914"	"HCD"	"MS2"	"35.07954"	"16.1"	"100.000"	"80.1756"	"27117"	"27117"	"27089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.7"	""	"15.7"	""	"22.7"	""	"24.4"	""	"35.8"	"32.0"	""	"801"	"25"	"36.000"	"29.000"	"0.113136442995374"	"16"	"0.0006037"	"0.003746"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"774.96228"	"1548.91728"	"1548.91500"	"1.48"	"0.00114"	"10/86"	"10"	"86"	"320428.045227051"	"HCD"	"MS2"	"0"	"29.6"	"100.000"	"71.4574"	"23622"	"23622"	"23594"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.9"	""	"36.6"	""	"30.8"	""	"55.8"	""	"63.3"	"62.2"	""	"803"	"20"	"36.000"	"29.000"	"0.38079001301531"	"16"	"0.0001889"	"0.0009701"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"774.96234"	"1548.91741"	"1548.91500"	"1.55"	"0.00120"	"7/86"	"7"	"86"	"216420.93359375"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"76.1174"	"25472"	"25472"	"25441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.9"	""	"19.6"	""	"27.7"	""	"42.2"	""	"45.6"	"42.3"	""	"803"	"12"	"36.000"	"29.000"	"2.68340082903799"	"20"	"0.0006037"	"0.004615"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8281"	"0.0000"	"1"	"1"	"1"	"774.96265"	"1548.91802"	"1548.91500"	"1.95"	"0.00151"	"9/86"	"9"	"86"	"1453452.54797363"	"HCD"	"MS2"	"0"	"130.7"	"100.000"	"55.0740"	"16945"	"16945"	"16917"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.3"	""	"128.2"	""	"152.2"	""	"267.8"	"2.2"	"276.6"	"259.6"	""	"782"	"64"	"35.000"	"28.000"	"1.39693679717404E-05"	"28"	"0"	"2.629E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTTLEDTK"	"[K].iLGTTLEDTk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"774.96545"	"1548.92363"	"1548.92489"	"-0.82"	"-0.00063"	"9/82"	"9"	"82"	"1857924.6449585"	"HCD"	"MS2"	"0"	"159.5"	"100.000"	"47.4671"	"13811"	"13811"	"13784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.3"	""	"213.9"	""	"218.5"	""	"275.7"	"1.3"	"281.4"	"266.9"	""	"720"	"32"	"35.000"	"28.000"	"0.0226622225828591"	"16"	"0"	"8.453E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTTLEDTK"	"[K].iLGTTLEDTk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.8088"	"0.0000"	"1"	"1"	"1"	"774.96655"	"1548.92583"	"1548.92489"	"0.60"	"0.00047"	"9/82"	"9"	"82"	"1498327.84649658"	"HCD"	"MS2"	"0"	"131.3"	"100.000"	"47.6800"	"13946"	"13946"	"13922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.6"	""	"162.0"	""	"182.0"	""	"264.5"	""	"244.8"	"235.5"	""	"727"	"68"	"35.000"	"28.000"	"5.70826879375245E-06"	""	"0"	"2.025E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPILMELQTYR"	"[K].gPILMELQTYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"775.43420"	"1549.86113"	"1549.86097"	"0.11"	"0.00008"	"7/92"	"7"	"92"	"2606925.9598999"	"HCD"	"MS2"	"15.48101"	"164.6"	"100.000"	"58.7552"	"18396"	"18396"	"18377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.7"	""	"201.3"	""	"232.3"	""	"249.1"	""	"333.6"	"331.8"	""	"1029"	"21"	"37.000"	"30.000"	"0.370156499182903"	"14"	"0"	"3.693E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPILMELQTYR"	"[K].gPILMELQTYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"775.43439"	"1549.86150"	"1549.86097"	"0.34"	"0.00027"	"8/92"	"8"	"92"	"2401305.9208374"	"HCD"	"MS2"	"14.68016"	"157.2"	"100.000"	"58.9037"	"18506"	"18506"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.4"	""	"182.3"	""	"210.0"	""	"270.5"	"3.1"	"304.7"	"317.7"	""	"1037"	"46"	"37.000"	"30.000"	"0.00136693782355046"	"24"	"0"	"1.267E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPWEGGLFK"	"[K].gTPWEGGLFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"775.44263"	"1549.87798"	"1549.87789"	"0.06"	"0.00005"	"16/78"	"16"	"78"	"6404444.12573242"	"HCD"	"MS2"	"8.27327"	"524.0"	"100.000"	"56.4243"	"17497"	"17497"	"17477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"785.6"	""	"744.3"	""	"764.8"	""	"787.3"	"5.4"	"932.2"	"941.1"	""	"944"	"41"	"36.000"	"29.000"	"0.00385426879281255"	"18"	"0"	"6.653E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPWEGGLFK"	"[K].gTPWEGGLFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"775.44299"	"1549.87871"	"1549.87789"	"0.53"	"0.00041"	"14/78"	"14"	"78"	"6713901.13330078"	"HCD"	"MS2"	"0"	"564.8"	"100.000"	"56.2531"	"17373"	"17373"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"810.7"	""	"785.8"	""	"829.1"	""	"870.6"	"2.2"	"1022.2"	"1028.5"	""	"919"	"47"	"36.000"	"29.000"	"0.000933868046525194"	"20"	"0"	"6.604E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"775.44318"	"1549.87908"	"1549.89902"	"-12.86"	"-0.00997"	"9/86"	"9"	"86"	"351145.792663574"	"HCD"	"MS2"	"44.68449"	"30.9"	"100.000"	"75.7966"	"25341"	"25341"	"25313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.2"	""	"35.6"	""	"34.2"	""	"61.8"	""	"65.6"	"62.2"	""	"922"	"16"	"36.000"	"29.000"	"1.23509659774157"	"15"	"0.00109"	"0.01503"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.2667"	"0.0000"	"1"	"1"	"1"	"517.29834"	"1549.88047"	"1549.89902"	"-11.97"	"-0.00618"	"8/86"	"8"	"86"	"47086660.4887695"	"HCD"	"MS2"	"48.05588"	"335.0"	"28.484"	"54.0683"	"16480"	"16480"	"16461"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"525.3"	""	"510.2"	""	"563.3"	""	"384.1"	"1.6"	"599.2"	"586.0"	""	"929"	"30"	"36.000"	"29.000"	"0.0503484051562849"	"24"	"0.0002277"	"0.001233"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLTLFEEK"	"[R].dPLTLFEEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"775.44617"	"1549.88506"	"1549.88778"	"-1.76"	"-0.00136"	"14/78"	"14"	"78"	"1815559.98425293"	"HCD"	"MS2"	"9.009963"	"149.9"	"100.000"	"66.8119"	"21734"	"21734"	"21715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.1"	""	"169.0"	""	"201.1"	""	"243.8"	""	"283.7"	"293.3"	""	"946"	"41"	"36.000"	"29.000"	"0.00384468834145619"	""	"0"	"0.0001687"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLTLFEEK"	"[R].dPLTLFEEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"775.44757"	"1549.88786"	"1549.88778"	"0.05"	"0.00004"	"14/78"	"14"	"78"	"1711664.87670898"	"HCD"	"MS2"	"16.05922"	"154.6"	"100.000"	"66.8015"	"21677"	"21677"	"21657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.4"	""	"176.5"	""	"219.3"	""	"254.0"	""	"291.5"	"287.5"	""	"951"	"44"	"36.000"	"29.000"	"0.00206609611593582"	""	"0"	"0.0001236"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAEFQSIPR"	"[R].lFLAEFQSIPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"775.44910"	"1549.89092"	"1549.89398"	"-1.98"	"-0.00153"	"15/94"	"15"	"94"	"1627963.7911377"	"HCD"	"MS2"	"0"	"89.6"	"100.000"	"72.4888"	"24043"	"24043"	"24015"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.3"	""	"123.5"	""	"114.9"	""	"157.8"	""	"180.8"	"176.8"	""	"912"	"41"	"36.000"	"29.000"	"0.00344322055815438"	"29"	"0"	"3.762E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAEFQSIPR"	"[R].lFLAEFQSIPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"775.44928"	"1549.89128"	"1549.89398"	"-1.74"	"-0.00135"	"15/94"	"15"	"94"	"1391956.82733154"	"HCD"	"MS2"	"0"	"76.1"	"100.000"	"72.5296"	"24008"	"24008"	"23985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.1"	""	"111.4"	""	"104.3"	""	"139.5"	""	"147.8"	"139.4"	""	"912"	"40"	"36.000"	"29.000"	"0.00444595274799128"	"27"	"0"	"4.536E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAEFQSIPR"	"[R].lFLAEFQSIPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"775.44952"	"1549.89177"	"1549.89398"	"-1.43"	"-0.00110"	"6/94"	"6"	"94"	"843330.971130371"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"72.7838"	"24163"	"24163"	"24143"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.4"	""	"73.0"	""	"76.6"	""	"93.3"	"0.1"	"109.1"	"118.6"	""	"920"	"24"	"36.000"	"29.000"	"0.195775270041522"	""	"0"	"3.755E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAEFQSIPR"	"[R].lFLAEFQSIPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"3"	"3"	"0.7636"	"0.0000"	"1"	"1"	"1"	"517.30212"	"1549.89182"	"1549.89398"	"-1.39"	"-0.00072"	"7/94"	"7"	"94"	"1752626.27380371"	"HCD"	"MS2"	"5.178534"	"18.1"	"100.000"	"72.5927"	"24085"	"24085"	"24063"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.9"	""	"19.0"	""	"26.8"	""	"40.2"	""	"32.6"	"32.4"	""	"920"	"55"	"36.000"	"29.000"	"0.000130244031806771"	"29"	"0"	"7.87E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAEFQSIPR"	"[R].lFLAEFQSIPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"517.30219"	"1549.89200"	"1549.89398"	"-1.28"	"-0.00066"	"13/94"	"13"	"94"	"1722777.5267334"	"HCD"	"MS2"	"5.774929"	"19.3"	"100.000"	"72.6219"	"24046"	"24046"	"24017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.2"	""	"25.0"	""	"20.0"	""	"38.5"	""	"38.1"	"40.0"	""	"915"	"54"	"36.000"	"29.000"	"0.000200627794232056"	"25"	"0"	"5.224E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIGGLYLGELVR"	"[K].mIGGLYLGELVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27926"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1"	"P27926"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"775.45068"	"1549.89409"	"1549.89735"	"-2.10"	"-0.00163"	"17/88"	"17"	"88"	"754773.558837891"	"HCD"	"MS2"	"22.04597"	"54.2"	"100.000"	"72.8431"	"24136"	"24136"	"24113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.6"	""	"63.6"	""	"74.0"	""	"87.8"	"1.4"	"101.7"	"115.3"	""	"923"	"16"	"36.000"	"29.000"	"1.07689089574268"	"23"	"0.0001859"	"0.0003247"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6066"	"0.0000"	"1"	"1"	"1"	"775.45123"	"1549.89519"	"1549.89902"	"-2.47"	"-0.00191"	"9/86"	"9"	"86"	"9303242.73291016"	"HCD"	"MS2"	"0"	"563.0"	"81.303"	"53.3312"	"16248"	"16248"	"16242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"597.8"	""	"492.5"	""	"541.4"	""	"1302.8"	"3.0"	"1233.1"	"1183.6"	""	"919"	"61"	"36.000"	"29.000"	"3.53415437311697E-05"	"26"	"0"	"6.669E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.3667"	"0.0000"	"1"	"1"	"1"	"517.30347"	"1549.89585"	"1549.89902"	"-2.04"	"-0.00106"	"8/86"	"8"	"86"	"46961160.407959"	"HCD"	"MS2"	"3.046223"	"352.2"	"30.927"	"54.2450"	"16606"	"16606"	"16589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"556.6"	""	"535.0"	""	"591.2"	""	"427.7"	"1.9"	"586.6"	"632.4"	""	"913"	"30"	"36.000"	"29.000"	"0.0459664306830848"	"19"	"0.0001889"	"0.0006985"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5593"	"0.0000"	"1"	"1"	"1"	"517.30353"	"1549.89603"	"1549.89902"	"-1.93"	"-0.00099"	"8/86"	"8"	"86"	"31566652.3582764"	"HCD"	"MS2"	"2.917197"	"318.8"	"39.851"	"53.6838"	"16384"	"16384"	"16374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"347.9"	""	"299.8"	""	"341.2"	""	"665.7"	""	"675.1"	"706.9"	""	"913"	"59"	"36.000"	"29.000"	"5.25340377553134E-05"	"27"	"7.476E-05"	"0.0001884"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"775.45190"	"1549.89653"	"1549.89902"	"-1.60"	"-0.00124"	"8/86"	"8"	"86"	"60975328.5600586"	"HCD"	"MS2"	"0"	"531.7"	"11.226"	"54.2176"	"16542"	"16542"	"16525"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"604.0"	""	"549.5"	""	"595.3"	""	"1026.3"	"5.3"	"1159.6"	"1114.1"	""	"913"	"48"	"36.000"	"29.000"	"0.000786033004481112"	"24"	"0.0001859"	"0.0003661"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5254"	"0.0000"	"1"	"1"	"1"	"517.30371"	"1549.89658"	"1549.89902"	"-1.57"	"-0.00081"	"8/86"	"8"	"86"	"31105177.4842529"	"HCD"	"MS2"	"0"	"274.0"	"35.839"	"53.4936"	"16253"	"16253"	"16245"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.3"	""	"262.8"	""	"279.3"	""	"577.3"	""	"593.9"	"592.2"	""	"916"	"59"	"36.000"	"29.000"	"5.15069078076852E-05"	"28"	"0"	"0.0001421"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"517.30371"	"1549.89658"	"1549.89902"	"-1.57"	"-0.00081"	"12/86"	"12"	"86"	"15975205.7988281"	"HCD"	"MS2"	"0"	"300.3"	"71.179"	"53.4067"	"16276"	"16276"	"16264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"319.7"	""	"291.1"	""	"288.2"	""	"640.7"	"1.8"	"663.3"	"652.0"	""	"916"	"54"	"36.000"	"29.000"	"0.000183174695390583"	""	"0"	"0.0001486"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5397"	"0.0000"	"1"	"1"	"1"	"775.45209"	"1549.89690"	"1549.89902"	"-1.37"	"-0.00106"	"9/86"	"9"	"86"	"75810783.4423828"	"HCD"	"MS2"	"0"	"596.5"	"10.654"	"53.8532"	"16448"	"16448"	"16439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"710.4"	""	"633.4"	""	"698.0"	""	"1167.0"	"2.9"	"1201.3"	"1251.9"	""	"915"	"63"	"36.000"	"29.000"	"2.11539317290162E-05"	"29"	"0.0001308"	"0.0002782"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6102"	"0.0000"	"1"	"1"	"1"	"775.45209"	"1549.89690"	"1549.89902"	"-1.37"	"-0.00106"	"9/86"	"9"	"86"	"37405864.998291"	"HCD"	"MS2"	"0"	"673.4"	"24.464"	"53.3654"	"16205"	"16205"	"16194"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"676.1"	""	"564.0"	""	"676.2"	""	"1487.4"	"0.8"	"1519.3"	"1484.8"	""	"915"	"59"	"36.000"	"29.000"	"5.3875473288577E-05"	"26"	"0"	"0.0001399"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5246"	"0.0000"	"1"	"1"	"1"	"775.45209"	"1549.89690"	"1549.89902"	"-1.37"	"-0.00106"	"9/86"	"9"	"86"	"68950011.8100586"	"HCD"	"MS2"	"0"	"667.6"	"12.986"	"53.6356"	"16308"	"16308"	"16301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"815.7"	""	"715.5"	""	"757.8"	""	"1316.6"	"1.8"	"1356.9"	"1375.2"	""	"915"	"61"	"36.000"	"29.000"	"3.63405167386359E-05"	""	"0.0001308"	"0.0002761"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.4340"	"0.0000"	"1"	"1"	"1"	"517.30383"	"1549.89695"	"1549.89902"	"-1.34"	"-0.00069"	"8/86"	"8"	"86"	"4198908.12988281"	"HCD"	"MS2"	"6.187133"	"133.6"	"100.000"	"54.5530"	"16678"	"16678"	"16656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.9"	""	"152.2"	""	"172.1"	""	"240.6"	""	"284.1"	"282.1"	""	"911"	"53"	"36.000"	"29.000"	"0.000210614555247363"	"20"	"7.476E-05"	"0.000198"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6102"	"0.0000"	"1"	"1"	"1"	"775.45215"	"1549.89702"	"1549.89902"	"-1.29"	"-0.00100"	"9/86"	"9"	"86"	"43867057.4709473"	"HCD"	"MS2"	"0"	"505.1"	"16.202"	"53.5898"	"16347"	"16347"	"16340"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"527.6"	""	"456.1"	""	"486.6"	""	"1115.1"	"0.3"	"1104.8"	"1113.9"	""	"895"	"59"	"36.000"	"29.000"	"5.16170332874938E-05"	"25"	"0"	"0.0001391"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.4400"	"0.0000"	"1"	"1"	"1"	"517.30389"	"1549.89713"	"1549.89902"	"-1.22"	"-0.00063"	"12/86"	"12"	"86"	"62424771.128418"	"HCD"	"MS2"	"2.079478"	"271.8"	"16.438"	"53.7593"	"16357"	"16357"	"16351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.6"	""	"303.6"	""	"315.6"	""	"519.9"	""	"558.5"	"566.1"	""	"893"	"50"	"36.000"	"29.000"	"0.00049070610730662"	"26"	"0"	"0.0001579"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.4423"	"0.0000"	"1"	"1"	"1"	"517.30389"	"1549.89713"	"1549.89902"	"-1.22"	"-0.00063"	"12/86"	"12"	"86"	"56037322.4248047"	"HCD"	"MS2"	"3.14303"	"359.0"	"25.452"	"53.9586"	"16491"	"16491"	"16477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.0"	""	"397.8"	""	"419.2"	""	"676.0"	""	"739.9"	"752.0"	""	"893"	"52"	"36.000"	"29.000"	"0.000299103478104479"	"27"	"7.476E-05"	"0.0001966"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.4894"	"0.0000"	"1"	"1"	"1"	"517.30389"	"1549.89713"	"1549.89902"	"-1.22"	"-0.00063"	"8/86"	"8"	"86"	"16195356.9991455"	"HCD"	"MS2"	"0"	"312.9"	"72.247"	"53.2324"	"16153"	"16153"	"16143"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"311.9"	""	"282.0"	"3.1"	"329.5"	""	"710.0"	"1.2"	"696.7"	"641.9"	""	"893"	"47"	"36.000"	"29.000"	"0.000858660456958386"	"22"	"0"	"0.0001607"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5397"	"0.0000"	"1"	"1"	"1"	"775.45221"	"1549.89714"	"1549.89902"	"-1.21"	"-0.00094"	"9/86"	"9"	"86"	"73810672.3178711"	"HCD"	"MS2"	"0"	"465.3"	"8.514"	"54.1417"	"16563"	"16563"	"16555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"574.3"	""	"561.9"	""	"582.5"	""	"803.4"	"5.0"	"934.3"	"955.2"	""	"893"	"63"	"36.000"	"29.000"	"2.12726435608618E-05"	""	"7.476E-05"	"0.0001889"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5873"	"0.0000"	"1"	"1"	"1"	"775.45227"	"1549.89726"	"1549.89902"	"-1.13"	"-0.00088"	"9/86"	"9"	"86"	"4248817.43798828"	"HCD"	"MS2"	"0"	"339.1"	"100.000"	"53.0799"	"16096"	"16096"	"16087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.4"	""	"336.5"	""	"345.4"	""	"777.9"	"3.8"	"720.0"	"675.3"	""	"893"	"63"	"36.000"	"29.000"	"2.18686242848011E-05"	"26"	"0"	"3.025E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"775.45227"	"1549.89726"	"1549.89902"	"-1.13"	"-0.00088"	"8/86"	"8"	"86"	"52914832.3955078"	"HCD"	"MS2"	"0"	"693.8"	"17.536"	"54.4284"	"16681"	"16681"	"16667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"752.5"	""	"685.6"	""	"796.6"	""	"1339.9"	"9.6"	"1527.9"	"1485.1"	""	"893"	"50"	"36.000"	"29.000"	"0.00043333270037511"	"24"	"0.0001308"	"0.0002916"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6066"	"0.0000"	"1"	"1"	"1"	"775.45233"	"1549.89739"	"1549.89902"	"-1.05"	"-0.00081"	"9/86"	"9"	"86"	"87707702.6323242"	"HCD"	"MS2"	"0"	"586.0"	"8.848"	"53.9058"	"16415"	"16415"	"16403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"702.2"	""	"674.7"	""	"694.2"	""	"1038.2"	"0.5"	"1198.8"	"1257.3"	""	"893"	"61"	"36.000"	"29.000"	"3.71382523797342E-05"	"26"	"0.0001308"	"0.0003038"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5645"	"0.0000"	"1"	"1"	"1"	"775.45251"	"1549.89775"	"1549.89902"	"-0.81"	"-0.00063"	"9/86"	"9"	"86"	"3251145.37353516"	"HCD"	"MS2"	"0"	"251.7"	"100.000"	"55.4814"	"17058"	"17058"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.2"	""	"175.1"	""	"234.5"	""	"461.0"	""	"772.2"	"552.6"	""	"894"	"62"	"36.000"	"29.000"	"2.92622369808072E-05"	""	"0"	"3.704E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.1613"	"0.0000"	"1"	"1"	"1"	"775.45251"	"1549.89775"	"1549.89902"	"-0.81"	"-0.00063"	"7/86"	"7"	"86"	"5085379.64587402"	"HCD"	"MS2"	"0"	"371.9"	"100.000"	"57.3013"	"17802"	"17802"	"17771"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"357.6"	""	"355.7"	""	"376.3"	""	"822.3"	""	"827.7"	"807.2"	""	"894"	"31"	"36.000"	"29.000"	"0.0380458703076462"	"19"	"0"	"0.0001379"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4918"	"0.0000"	"1"	"1"	"1"	"775.45270"	"1549.89812"	"1549.89902"	"-0.58"	"-0.00045"	"9/86"	"9"	"86"	"3322100.11712646"	"HCD"	"MS2"	"19.24603"	"259.3"	"100.000"	"55.1483"	"16922"	"16922"	"16891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.7"	""	"229.5"	""	"281.2"	""	"520.9"	""	"600.5"	"547.4"	""	"899"	"61"	"36.000"	"29.000"	"3.53777082467947E-05"	""	"0"	"2.342E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5968"	"0.0000"	"1"	"1"	"1"	"517.30426"	"1549.89823"	"1549.89902"	"-0.51"	"-0.00026"	"8/86"	"8"	"86"	"6675603.55133057"	"HCD"	"MS2"	"9.127611"	"180.4"	"100.000"	"57.3636"	"17827"	"17827"	"17803"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.9"	""	"182.0"	""	"197.5"	""	"353.9"	"0.7"	"400.0"	"391.6"	""	"899"	"62"	"36.000"	"29.000"	"3.06005826732837E-05"	"24"	"0.0001889"	"0.0004236"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5397"	"0.0000"	"1"	"1"	"1"	"775.45276"	"1549.89824"	"1549.89902"	"-0.50"	"-0.00039"	"9/86"	"9"	"86"	"4118736.71154785"	"HCD"	"MS2"	"0"	"304.1"	"100.000"	"55.6484"	"17180"	"17180"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"257.0"	""	"228.6"	""	"291.2"	""	"593.9"	""	"870.5"	"662.7"	""	"899"	"63"	"36.000"	"29.000"	"2.10246946008596E-05"	""	"0"	"3.151E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6182"	"0.0000"	"1"	"1"	"1"	"517.30432"	"1549.89841"	"1549.89902"	"-0.39"	"-0.00020"	"8/86"	"8"	"86"	"7124267.69555664"	"HCD"	"MS2"	"11.77549"	"192.9"	"100.000"	"57.5651"	"17963"	"17963"	"17941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.0"	""	"184.7"	""	"213.0"	""	"408.5"	"1.0"	"405.7"	"417.2"	""	"896"	"55"	"36.000"	"29.000"	"0.000137809137300384"	"20"	"0"	"0.0001504"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"517.30438"	"1549.89859"	"1549.89902"	"-0.27"	"-0.00014"	"8/86"	"8"	"86"	"26167319.0709229"	"HCD"	"MS2"	"46.7987"	"248.4"	"37.154"	"52.3493"	"15798"	"15798"	"15778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"239.1"	""	"249.8"	""	"279.8"	""	"509.0"	"1.4"	"546.0"	"537.7"	""	"880"	"60"	"36.000"	"29.000"	"4.90289594780361E-05"	"23"	"0.0001308"	"0.0002068"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.1522"	"0.0000"	"1"	"1"	"1"	"775.45300"	"1549.89873"	"1549.89902"	"-0.18"	"-0.00014"	"9/86"	"9"	"86"	"7788430.12640381"	"HCD"	"MS2"	"0"	"558.7"	"100.000"	"52.7405"	"16008"	"16008"	"15990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"592.0"	""	"548.2"	""	"589.7"	""	"1152.4"	""	"1282.4"	"1151.8"	""	"880"	"46"	"36.000"	"29.000"	"0.00124008848975636"	"23"	"0"	"0.0001248"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.2800"	"0.0000"	"1"	"1"	"1"	"775.45313"	"1549.89897"	"1549.89902"	"-0.03"	"-0.00002"	"8/86"	"8"	"86"	"5934207.41876221"	"HCD"	"MS2"	"0"	"454.0"	"100.000"	"54.5001"	"16657"	"16657"	"16640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"482.2"	""	"432.3"	""	"502.7"	""	"898.2"	""	"1011.2"	"991.8"	""	"880"	"50"	"36.000"	"29.000"	"0.000445094959874355"	"19"	"0"	"6.448E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.1765"	"0.0000"	"1"	"1"	"1"	"775.45337"	"1549.89946"	"1549.89902"	"0.29"	"0.00022"	"8/86"	"8"	"86"	"5088663.4317627"	"HCD"	"MS2"	"5.18977"	"385.8"	"100.000"	"57.4889"	"17932"	"17932"	"17909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"375.2"	""	"357.9"	""	"379.1"	""	"857.0"	""	"893.9"	"817.1"	""	"886"	"34"	"36.000"	"29.000"	"0.0159736338858588"	"19"	"0"	"6.659E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5806"	"0.0000"	"1"	"1"	"1"	"517.30475"	"1549.89969"	"1549.89902"	"0.44"	"0.00023"	"8/86"	"8"	"86"	"24425924.8873291"	"HCD"	"MS2"	"48.53086"	"361.4"	"56.486"	"52.5500"	"15930"	"15930"	"15910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"335.3"	""	"317.4"	""	"386.7"	""	"775.1"	"5.9"	"838.1"	"781.4"	""	"889"	"62"	"36.000"	"29.000"	"2.90316530651801E-05"	"24"	"0.0001308"	"0.0002252"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6441"	"0.0000"	"1"	"1"	"1"	"517.30481"	"1549.89988"	"1549.89902"	"0.56"	"0.00029"	"8/86"	"8"	"86"	"23493713.3609619"	"HCD"	"MS2"	"3.192605"	"315.0"	"51.132"	"54.5431"	"16727"	"16727"	"16709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"335.1"	""	"309.5"	""	"361.2"	""	"606.6"	"1.7"	"699.5"	"681.8"	""	"875"	"59"	"36.000"	"29.000"	"5.95632048578853E-05"	"24"	"0.0001859"	"0.0003212"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.1200"	"0.0000"	"1"	"1"	"1"	"775.45367"	"1549.90007"	"1549.89902"	"0.68"	"0.00053"	"8/86"	"8"	"86"	"4351596.94989014"	"HCD"	"MS2"	"0"	"335.6"	"100.000"	"54.7409"	"16808"	"16808"	"16789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.6"	""	"340.7"	""	"368.4"	""	"667.9"	""	"752.7"	"722.1"	""	"875"	"50"	"36.000"	"29.000"	"0.00047203919097555"	"25"	"0"	"7.728E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5952"	"0.0000"	"1"	"1"	"1"	"517.30493"	"1549.90024"	"1549.89902"	"0.79"	"0.00041"	"7/86"	"7"	"86"	"40455502.1099854"	"HCD"	"MS2"	"4.532305"	"381.9"	"38.424"	"54.2542"	"16556"	"16556"	"16541"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"456.0"	""	"422.6"	""	"473.5"	""	"662.1"	""	"795.0"	"821.5"	""	"876"	"42"	"36.000"	"29.000"	"0.00300935976726234"	"20"	"0.0001889"	"0.0005317"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFnDGLk.[H]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"775.45441"	"1549.90154"	"1549.89902"	"1.63"	"0.00126"	"9/86"	"9"	"86"	"3465122.68920898"	"HCD"	"MS2"	"21.77223"	"269.6"	"100.000"	"55.3496"	"17058"	"17058"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.4"	""	"251.8"	""	"287.7"	""	"559.2"	""	"620.2"	"553.5"	""	"892"	"63"	"36.000"	"29.000"	"2.23015402599732E-05"	""	"0"	"5.855E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"775.45477"	"1549.90227"	"1549.89902"	"2.10"	"0.00163"	"7/86"	"7"	"86"	"29026101.0026855"	"HCD"	"MS2"	"2.27911"	"1047.2"	"50.173"	"52.2619"	"15763"	"15763"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1038.5"	""	"926.1"	""	"1066.0"	""	"2201.5"	"7.4"	"2475.9"	"2253.6"	""	"882"	"39"	"36.000"	"29.000"	"0.00566811417035135"	"20"	"0.0001308"	"0.0002123"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"775.45587"	"1549.90447"	"1549.89902"	"3.52"	"0.00273"	"8/86"	"8"	"86"	"26784045.2366943"	"HCD"	"MS2"	"1.523368"	"791.9"	"40.793"	"52.4232"	"15879"	"15879"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"747.4"	""	"706.3"	""	"801.5"	""	"1655.2"	"1.2"	"1950.4"	"1679.9"	""	"928"	"48"	"36.000"	"29.000"	"0.000705534053795877"	""	"0.0001308"	"0.0002235"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEYHTGK"	"[R].kEYHTGk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"517.31451"	"1549.92899"	"1549.93054"	"-1.00"	"-0.00052"	"5/66"	"5"	"66"	"2506796.73358154"	"HCD"	"MS2"	"36.96962"	"162.0"	"100.000"	"22.7798"	"3844"	"3844"	"3836"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"253.5"	""	"160.4"	""	"148.1"	""	"359.2"	""	"319.3"	"296.2"	""	"731"	"6"	"35.000"	"28.000"	"8.27727494425264"	"13"	"0.0007076"	"0.006918"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEYHTGK"	"[R].kEYHTGk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"1"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"517.31464"	"1549.92936"	"1549.93054"	"-0.76"	"-0.00039"	"5/66"	"5"	"66"	"3877653.78717041"	"HCD"	"MS2"	"34.72286"	"263.3"	"100.000"	"22.7927"	"3817"	"3817"	"3810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.5"	""	"266.3"	""	"258.7"	""	"550.5"	"2.3"	"546.2"	"472.3"	""	"731"	"13"	"35.000"	"28.000"	"1.67450859594162"	"15"	"0.0008731"	"0.008903"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAELFSELDER"	"[K].iAELFSELDER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.1207"	"0.0000"	"1"	"1"	"1"	"775.91614"	"1550.82500"	"1550.82635"	"-0.87"	"-0.00068"	"10/94"	"10"	"94"	"2256268.48999023"	"HCD"	"MS2"	"9.258102"	"107.6"	"100.000"	"74.4715"	"24852"	"24852"	"24831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.9"	""	"153.3"	""	"148.3"	""	"195.0"	"0.0"	"178.9"	"172.9"	""	"958"	"58"	"36.000"	"29.000"	"7.80432799634427E-05"	""	"0"	"1.509E-05"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAELFSDLEER"	"[K].iAELFSDLEER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"775.91644"	"1550.82561"	"1550.82635"	"-0.48"	"-0.00037"	"13/94"	"13"	"94"	"469337.731018066"	"HCD"	"MS2"	"20.92213"	"34.0"	"100.000"	"74.8360"	"25001"	"25001"	"24975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.2"	""	"44.5"	""	"41.5"	""	"60.5"	""	"59.9"	"64.8"	""	"970"	"17"	"36.000"	"29.000"	"1.08328252807281"	"21"	"0.0002277"	"0.001206"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAELFSELDER"	"[K].iAELFSELDER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.2239"	"0.0000"	"1"	"1"	"1"	"775.91656"	"1550.82585"	"1550.82635"	"-0.32"	"-0.00025"	"8/94"	"8"	"94"	"1775335.72186279"	"HCD"	"MS2"	"11.8735"	"99.2"	"100.000"	"74.4073"	"24774"	"24774"	"24753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.6"	""	"138.1"	""	"129.7"	""	"179.9"	""	"170.1"	"171.4"	""	"951"	"67"	"36.000"	"29.000"	"9.40049063873188E-06"	""	"0"	"8.864E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAELFSDLEER"	"[K].iAELFSDLEER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"775.91681"	"1550.82634"	"1550.82635"	"-0.01"	"-0.00001"	"11/94"	"11"	"94"	"727972.626708984"	"HCD"	"MS2"	"4.83171"	"47.2"	"100.000"	"74.7625"	"24919"	"24919"	"24897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.6"	""	"64.3"	""	"67.2"	""	"79.8"	"0.1"	"82.8"	"79.4"	""	"943"	"29"	"36.000"	"29.000"	"0.0530251245225407"	""	"0"	"0.0001674"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPMVMDAK"	"[K].tISPMVMDAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"775.93683"	"1550.86638"	"1550.86864"	"-1.46"	"-0.00113"	"16/86"	"16"	"86"	"3653042.08709717"	"HCD"	"MS2"	"0"	"276.8"	"100.000"	"45.1773"	"12927"	"12927"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"477.9"	""	"358.3"	""	"310.2"	""	"300.2"	"2.2"	"538.5"	"639.1"	""	"1019"	"57"	"37.000"	"30.000"	"9.35716285935983E-05"	"23"	"0"	"3.212E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPMVMDAK"	"[K].tISPMVMDAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"517.62714"	"1550.86686"	"1550.86864"	"-1.15"	"-0.00060"	"12/86"	"12"	"86"	"9761315.56109619"	"HCD"	"MS2"	"28.97074"	"292.6"	"94.034"	"45.2644"	"12963"	"12963"	"12939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"452.4"	""	"368.6"	""	"362.5"	""	"330.0"	""	"579.8"	"687.7"	""	"1052"	"47"	"37.000"	"30.000"	"0.00108389133438002"	"23"	"0"	"0.0001657"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPMVMDAK"	"[K].tISPMVMDAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"775.93744"	"1550.86760"	"1550.86864"	"-0.67"	"-0.00052"	"16/86"	"16"	"86"	"4954767.24664307"	"HCD"	"MS2"	"8.746336"	"376.3"	"100.000"	"44.9681"	"12793"	"12793"	"12768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"625.2"	""	"475.3"	""	"463.0"	""	"385.4"	"6.3"	"748.1"	"867.4"	""	"1037"	"57"	"37.000"	"30.000"	"9.30569385512664E-05"	"23"	"0"	"3.481E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPMVMDAK"	"[K].tISPMVMDAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"517.62744"	"1550.86777"	"1550.86864"	"-0.56"	"-0.00029"	"11/86"	"11"	"86"	"8975553.63946533"	"HCD"	"MS2"	"38.47784"	"311.4"	"100.000"	"44.9981"	"12805"	"12805"	"12784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"451.2"	""	"392.3"	""	"386.9"	""	"372.9"	"0.8"	"598.9"	"753.4"	""	"1035"	"43"	"37.000"	"30.000"	"0.00260561565047741"	"25"	"0.0001308"	"0.0002099"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLATAFDTTLGGR"	"[K].vLATAFDTTLGGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"775.93921"	"1550.87114"	"1550.87397"	"-1.83"	"-0.00142"	"10/106"	"10"	"106"	"7612952.04547119"	"HCD"	"MS2"	"2.343631"	"327.2"	"100.000"	"59.0971"	"18584"	"18584"	"18565"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"452.8"	""	"453.9"	""	"467.0"	""	"517.8"	""	"589.9"	"618.7"	""	"1029"	"56"	"37.000"	"30.000"	"0.000126004303792912"	"21"	"0"	"1.101E-05"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLATAFDTTLGGR"	"[K].vLATAFDTTLGGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"775.94006"	"1550.87285"	"1550.87397"	"-0.72"	"-0.00056"	"10/106"	"10"	"106"	"7450597.78070068"	"HCD"	"MS2"	"0"	"317.2"	"100.000"	"58.9544"	"18474"	"18474"	"18457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"455.3"	""	"433.0"	""	"424.1"	""	"523.8"	"0.5"	"575.8"	"592.2"	""	"989"	"56"	"36.000"	"29.000"	"0.000128282169456775"	"23"	"0"	"1.192E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLATAFDTTLGGR"	"[K].vLATAFDTTLGGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.8961"	"0.0000"	"1"	"1"	"1"	"517.62927"	"1550.87326"	"1550.87397"	"-0.46"	"-0.00024"	"17/106"	"17"	"106"	"7453890.62145996"	"HCD"	"MS2"	"19.64565"	"45.7"	"100.000"	"59.0741"	"18575"	"18575"	"18549"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.0"	""	"59.2"	""	"64.9"	""	"77.7"	"0.1"	"82.7"	"85.1"	""	"991"	"77"	"36.000"	"29.000"	"1.03524623283818E-06"	"25"	"0"	"6.757E-06"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLATAFDTTLGGR"	"[K].vLATAFDTTLGGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"517.62982"	"1550.87491"	"1550.87397"	"0.61"	"0.00031"	"15/106"	"15"	"106"	"4179741.01361084"	"HCD"	"MS2"	"2.166637"	"36.7"	"100.000"	"59.0452"	"18510"	"18510"	"18489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.1"	""	"46.6"	""	"47.0"	""	"62.2"	"1.2"	"65.9"	"69.7"	""	"976"	"66"	"36.000"	"29.000"	"1.27473474094681E-05"	"24"	"0"	"5.566E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FETLQAQAGK"	"[K].fETLQAQAGk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"775.94867"	"1550.89006"	"1550.89426"	"-2.71"	"-0.00210"	"8/84"	"8"	"84"	"3076266.93554688"	"HCD"	"MS2"	"0"	"256.1"	"100.000"	"39.9049"	"10736"	"10736"	"10709"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.2"	""	"296.1"	""	"352.4"	""	"429.4"	""	"464.8"	"565.4"	""	"958"	"45"	"36.000"	"29.000"	"0.001493948110781"	"22"	"0"	"6.58E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FETLQAQAGK"	"[K].fETLQAQAGk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.8923"	"0.0000"	"1"	"1"	"1"	"775.94867"	"1550.89006"	"1550.89426"	"-2.71"	"-0.00210"	"8/84"	"8"	"84"	"3684313.40960693"	"HCD"	"MS2"	"0"	"294.9"	"100.000"	"40.0164"	"10826"	"10826"	"10797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"417.6"	""	"368.7"	""	"423.2"	""	"479.7"	""	"463.1"	"645.9"	""	"958"	"65"	"36.000"	"29.000"	"1.46330721323023E-05"	"24"	"0"	"7.04E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDLLFTVAK"	"[R].eGDLLFTVAk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"775.96240"	"1550.91753"	"1550.91942"	"-1.22"	"-0.00094"	"6/84"	"6"	"84"	"1155088.89263916"	"HCD"	"MS2"	"100"	"94.5"	"100.000"	"58.4610"	"18276"	"18276"	"18250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.1"	""	"114.2"	""	"115.6"	""	"147.5"	""	"195.9"	"199.3"	""	"695"	"11"	"35.000"	"28.000"	"3.04056861891534"	"13"	"0.0001889"	"0.0006253"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLFPEVK"	"[K].fVNLFPEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"775.97009"	"1550.93291"	"1550.93467"	"-1.14"	"-0.00088"	"7/76"	"7"	"76"	"1559672.76947021"	"HCD"	"MS2"	"3.437902"	"115.4"	"100.000"	"69.9891"	"23022"	"23022"	"23002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.3"	""	"143.1"	""	"147.9"	""	"193.0"	""	"225.3"	"233.3"	""	"598"	"38"	"34.000"	"27.000"	"0.00452554813282426"	""	"0.0001889"	"0.0005514"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLFPEVK"	"[K].fVNLFPEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.3226"	"0.0000"	"1"	"1"	"1"	"775.97021"	"1550.93315"	"1550.93467"	"-0.98"	"-0.00076"	"12/76"	"12"	"76"	"5328035.15649414"	"HCD"	"MS2"	"9.988053"	"344.3"	"100.000"	"69.8234"	"22903"	"22903"	"22885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.9"	""	"413.4"	""	"430.7"	""	"600.8"	""	"696.5"	"694.8"	""	"599"	"31"	"34.000"	"27.000"	"0.0253161014125507"	""	"0.0001889"	"0.0004351"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLFPEVK"	"[K].fVNLFPEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"517.64935"	"1550.93351"	"1550.93467"	"-0.75"	"-0.00039"	"9/76"	"9"	"76"	"3855801.9072876"	"HCD"	"MS2"	"0"	"99.2"	"100.000"	"69.8326"	"22907"	"22907"	"22885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.1"	""	"115.0"	""	"117.0"	""	"171.8"	"1.3"	"209.4"	"195.9"	""	"596"	"30"	"34.000"	"27.000"	"0.0323754835837885"	"19"	"0.0001889"	"0.00098"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLFPEVK"	"[K].fVNLFPEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"775.97052"	"1550.93376"	"1550.93467"	"-0.59"	"-0.00045"	"14/76"	"14"	"76"	"5447505.61462402"	"HCD"	"MS2"	"0"	"352.2"	"100.000"	"69.6880"	"22899"	"22899"	"22882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"476.6"	""	"410.2"	""	"438.5"	""	"603.0"	"0.9"	"677.6"	"735.1"	""	"594"	"43"	"34.000"	"27.000"	"0.00144795961560706"	""	"7.476E-05"	"0.0001924"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLFPEVK"	"[K].fVNLFPEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"775.97070"	"1550.93413"	"1550.93467"	"-0.35"	"-0.00027"	"14/76"	"14"	"76"	"947951.425476074"	"HCD"	"MS2"	"5.513858"	"80.1"	"100.000"	"70.1403"	"23032"	"23032"	"23011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.6"	""	"84.3"	""	"103.0"	""	"133.3"	"0.7"	"167.8"	"169.5"	""	"592"	"40"	"34.000"	"27.000"	"0.00329831181943152"	""	"0.0001859"	"0.0003155"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLFPEVK"	"[K].fVNLFPEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"517.64972"	"1550.93460"	"1550.93467"	"-0.04"	"-0.00002"	"9/76"	"9"	"76"	"3652406.87713623"	"HCD"	"MS2"	"21.35962"	"93.2"	"100.000"	"69.6949"	"22902"	"22902"	"22882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.9"	""	"106.3"	""	"111.7"	""	"165.2"	""	"192.5"	"192.8"	""	"604"	"32"	"34.000"	"27.000"	"0.017298440135772"	"20"	"0.0003839"	"0.001627"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFAADAIK"	"[R].kFAADAIk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"1"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"775.99640"	"1550.98552"	"1550.98733"	"-1.16"	"-0.00090"	"6/70"	"6"	"70"	"484810.114135742"	"HCD"	"MS2"	"0"	"44.2"	"100.000"	"35.5543"	"8996"	"8996"	"8970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.8"	""	"66.2"	""	"57.4"	""	"69.4"	""	"77.3"	"75.3"	""	"245"	"26"	"30.000"	"23.000"	"0.0285848612629423"	""	"0.002981"	"0.05541"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFAADAIK"	"[R].kFAADAIk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"1"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"517.66711"	"1550.98679"	"1550.98733"	"-0.35"	"-0.00018"	"6/70"	"6"	"70"	"48771697.2174072"	"HCD"	"MS2"	"23.13581"	"1204.0"	"44.068"	"35.4649"	"8959"	"8959"	"8938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1920.0"	""	"1747.3"	""	"1816.4"	""	"1834.6"	""	"2032.8"	"2040.1"	""	"224"	"19"	"30.000"	"23.000"	"0.150736359654266"	"23"	"0.0001889"	"0.0009742"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFAADAIK"	"[R].kFAADAIk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"1"	"3"	"3"	"0.4706"	"0.0000"	"1"	"1"	"1"	"517.66711"	"1550.98679"	"1550.98733"	"-0.35"	"-0.00018"	"6/70"	"6"	"70"	"43724382.5823975"	"HCD"	"MS2"	"23.25248"	"1476.3"	"58.260"	"35.4145"	"8895"	"8895"	"8875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2311.9"	""	"2150.4"	""	"2238.5"	""	"2214.3"	""	"2490.6"	"2567.4"	""	"224"	"17"	"30.000"	"23.000"	"0.208553759306241"	"22"	"0.0001889"	"0.0009291"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMNIDLWSK"	"[R].sMNIDLWSk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"776.43317"	"1551.85906"	"1551.86052"	"-0.94"	"-0.00073"	"8/90"	"8"	"90"	"1320690.70068359"	"HCD"	"MS2"	"0"	"112.0"	"100.000"	"58.4311"	"18264"	"18264"	"18234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.0"	""	"139.4"	""	"145.2"	""	"177.0"	"1.7"	"224.6"	"217.0"	""	"963"	"21"	"36.000"	"29.000"	"0.377221372991931"	"17"	"0.0001308"	"0.0002748"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMGPNYTPGK"	"[R].imGPNYTPGk.[K]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"776.43420"	"1551.86113"	"1551.86052"	"0.39"	"0.00031"	"7/82"	"7"	"82"	"904458.861022949"	"HCD"	"MS2"	"0"	"72.1"	"100.000"	"35.7102"	"9060"	"9060"	"9033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.3"	""	"88.7"	""	"99.3"	""	"139.1"	""	"127.7"	"130.4"	""	"970"	"36"	"36.000"	"29.000"	"0.0127567997606926"	"24"	"0.0004557"	"0.002627"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMGPNYTPGK"	"[R].imGPNYTPGk.[K]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"776.43457"	"1551.86186"	"1551.86052"	"0.87"	"0.00067"	"9/82"	"9"	"82"	"896397.360961914"	"HCD"	"MS2"	"0"	"67.0"	"100.000"	"35.6734"	"9002"	"9002"	"8971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.6"	""	"79.6"	""	"91.9"	""	"121.9"	""	"126.5"	"126.5"	""	"984"	"38"	"36.000"	"29.000"	"0.00805313728542482"	"20"	"0.0001889"	"0.001046"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLFVDADQIVR"	"[K].fLFVDADQIVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"776.43872"	"1551.87016"	"1551.87324"	"-1.98"	"-0.00154"	"8/90"	"8"	"90"	"940693.950012207"	"HCD"	"MS2"	"13.15366"	"56.2"	"100.000"	"71.4875"	"23634"	"23634"	"23610"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.4"	""	"71.2"	""	"84.5"	""	"95.6"	"1.5"	"110.6"	"102.0"	""	"953"	"50"	"36.000"	"29.000"	"0.000432576482629905"	"22"	"0"	"2.308E-05"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLFVDADQIVR"	"[K].fLFVDADQIVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"776.43976"	"1551.87224"	"1551.87324"	"-0.65"	"-0.00050"	"8/90"	"8"	"90"	"661281.195861816"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"71.5214"	"23596"	"23596"	"23571"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.4"	""	"61.0"	""	"69.4"	""	"84.4"	""	"89.3"	"89.5"	""	"955"	"52"	"36.000"	"29.000"	"0.000324319734574706"	"22"	"0"	"1.551E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPELMAEK"	"[K].yLPELMAEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"3"	"Q91V33"	"KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Khdrbs1 PE=1 SV=1"	"Q920F3; Q91V33; Q9JLP1"	"KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Khdrbs2 PE=1 SV=1; KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Khdrbs1 PE=1 SV=1; KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Khdrbs3 PE=1 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"776.44629"	"1551.88530"	"1551.88567"	"-0.24"	"-0.00019"	"13/72"	"13"	"72"	"2328634.31787109"	"HCD"	"MS2"	"8.256727"	"168.9"	"100.000"	"58.1981"	"18222"	"18222"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.4"	""	"175.7"	""	"185.4"	""	"286.2"	""	"386.6"	"376.9"	""	"928"	"40"	"36.000"	"29.000"	"0.00462932829613664"	"28"	"0"	"0.0001209"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPELMAEK"	"[K].yLPELMAEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"3"	"Q91V33"	"KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Khdrbs1 PE=1 SV=1"	"Q920F3; Q91V33; Q9JLP1"	"KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Khdrbs2 PE=1 SV=1; KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Khdrbs1 PE=1 SV=1; KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Khdrbs3 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"776.44684"	"1551.88640"	"1551.88567"	"0.47"	"0.00036"	"8/72"	"8"	"72"	"2196216.4039917"	"HCD"	"MS2"	"4.473368"	"159.8"	"100.000"	"58.0383"	"18103"	"18103"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.5"	""	"157.3"	""	"169.9"	""	"259.2"	""	"366.4"	"376.8"	""	"928"	"40"	"36.000"	"29.000"	"0.00468293339139581"	"25"	"0"	"9.062E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVESLGFILFR"	"[R].aAVESLGFILFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"776.45715"	"1551.90703"	"1551.90963"	"-1.68"	"-0.00130"	"9/90"	"9"	"90"	"303833.960571289"	"HCD"	"MS2"	"35.31344"	"20.3"	"100.000"	"82.1234"	"27911"	"27911"	"27888"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.1"	""	"24.4"	""	"36.7"	""	"31.0"	"0.6"	"36.2"	"42.2"	""	"752"	"55"	"35.000"	"28.000"	"0.000115395226763507"	"16"	"0"	"4.229E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVESLGFILFR"	"[R].aAVESLGFILFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"776.45819"	"1551.90911"	"1551.90963"	"-0.34"	"-0.00026"	"9/90"	"9"	"90"	"335969.44732666"	"HCD"	"MS2"	"11.12471"	"20.6"	"100.000"	"82.1600"	"27977"	"27977"	"27950"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"28.5"	""	"35.6"	""	"35.0"	""	"38.1"	"38.0"	""	"749"	"62"	"35.000"	"28.000"	"2.3305145679585E-05"	"16"	"0"	"3.18E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKVEAFQTAISK"	"[K].TKVEAFQTAISk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"1"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"776.45966"	"1551.91203"	"1551.89437"	"11.38"	"0.00883"	"9/128"	"9"	"128"	"1756186.37438965"	"HCD"	"MS2"	"0"	"139.1"	"100.000"	"47.1481"	"13729"	"13729"	"13698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.3"	""	"170.2"	""	"183.5"	""	"229.5"	"2.0"	"289.8"	"282.9"	""	"715"	"84"	"35.000"	"28.000"	"1.50409769647438E-07"	""	"0.0001889"	"0.0007716"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKVEAFQTAISK"	"[K].TKVEAFQTAISk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"1"	"2"	"2"	"0.2043"	"0.0000"	"1"	"1"	"1"	"776.46014"	"1551.91301"	"1551.89437"	"12.01"	"0.00932"	"10/128"	"10"	"128"	"2904418.48809814"	"HCD"	"MS2"	"0"	"224.3"	"100.000"	"46.9211"	"13588"	"13588"	"13560"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.6"	""	"278.0"	""	"298.3"	""	"379.2"	"3.3"	"463.3"	"458.8"	""	"691"	"93"	"35.000"	"28.000"	"1.75973815950261E-08"	""	"0.0003839"	"0.001568"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSGVVSTGLK"	"[R].vFSGVVSTGLk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"517.98840"	"1551.95066"	"1551.95105"	"-0.25"	"-0.00013"	"9/90"	"9"	"90"	"29543415.741333"	"HCD"	"MS2"	"12.526"	"341.8"	"49.366"	"52.2272"	"15748"	"15748"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.0"	""	"469.6"	""	"501.0"	""	"589.8"	""	"634.2"	"674.1"	""	"359"	"44"	"32.000"	"25.000"	"0.000799952965873519"	"24"	"0"	"0.0001835"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSGVVSTGLK"	"[R].vFSGVVSTGLk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"517.98840"	"1551.95066"	"1551.95105"	"-0.25"	"-0.00013"	"13/90"	"13"	"90"	"30506297.4544678"	"HCD"	"MS2"	"14.26015"	"376.7"	"51.979"	"52.4299"	"15881"	"15881"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.1"	""	"487.4"	""	"540.0"	""	"653.7"	""	"753.7"	"714.6"	""	"359"	"38"	"32.000"	"25.000"	"0.00310502036479111"	"23"	"0.0001308"	"0.0002753"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSLDFLDDVR"	"[-].mLSLDFLDDVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P42667"	"Signal peptidase complex catalytic subunit SEC11A OS=Rattus norvegicus OX=10116 GN=Sec11a PE=2 SV=1"	"P42667"	"Signal peptidase complex catalytic subunit SEC11A OS=Rattus norvegicus OX=10116 GN=Sec11a PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"776.91510"	"1552.82292"	"1552.82425"	"-0.85"	"-0.00066"	"6/92"	"6"	"92"	"1311034.20782471"	"HCD"	"MS2"	"66.11834"	"74.7"	"100.000"	"80.8533"	"27444"	"27444"	"27422"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.7"	""	"97.0"	""	"111.1"	""	"137.2"	"2.0"	"133.7"	"118.4"	""	"934"	"3"	"36.000"	"29.000"	"25.3697904806967"	"13"	"0.001587"	"0.02096"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].qNEGFSLTAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8169"	"0.0000"	"1"	"1"	"1"	"776.93982"	"1552.87236"	"1552.87353"	"-0.75"	"-0.00058"	"9/100"	"9"	"100"	"1263220.22314453"	"HCD"	"MS2"	"0"	"127.1"	"100.000"	"39.0445"	"10429"	"10429"	"10398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.4"	""	"175.5"	""	"147.2"	""	"204.7"	"0.4"	"213.6"	"229.3"	""	"928"	"71"	"36.000"	"29.000"	"3.44760879984069E-06"	""	"0"	"1.41E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].qNEGFSLTAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"776.94000"	"1552.87273"	"1552.87353"	"-0.52"	"-0.00040"	"15/100"	"15"	"100"	"1078281.8392334"	"HCD"	"MS2"	"0"	"110.3"	"100.000"	"38.9697"	"10355"	"10355"	"10326"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.3"	""	"157.6"	""	"129.5"	""	"170.4"	""	"206.1"	"183.6"	""	"922"	"52"	"36.000"	"29.000"	"0.000312392735008521"	"27"	"0"	"2.341E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFSSNGGVVK"	"[K].sLFSSNGGVVk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"518.30750"	"1552.90793"	"1552.90991"	"-1.28"	"-0.00066"	"7/98"	"7"	"98"	"16231650.0617676"	"HCD"	"MS2"	"69.45842"	"714.0"	"100.000"	"42.8566"	"11986"	"11986"	"11955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1001.5"	""	"983.1"	""	"1054.4"	""	"1049.5"	"29.0"	"1283.5"	"1363.7"	""	"694"	"0"	"35.000"	"28.000"	"32.2351336212638"	"13"	"0.005293"	"0.1608"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFSSNGGVVK"	"[K].sLFSSNGGVVk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7571"	"0.0000"	"1"	"1"	"1"	"776.95782"	"1552.90837"	"1552.90991"	"-0.99"	"-0.00077"	"10/98"	"10"	"98"	"5302216.87237549"	"HCD"	"MS2"	"0"	"430.9"	"100.000"	"42.7927"	"11959"	"11959"	"11939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"676.8"	""	"573.5"	""	"535.7"	""	"742.9"	""	"780.5"	"777.3"	""	"695"	"70"	"35.000"	"28.000"	"3.8366732041597E-06"	""	"0"	"2.086E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFTGSTQVGK"	"[K].vAFTGSTQVGk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"518.30774"	"1552.90866"	"1552.90991"	"-0.80"	"-0.00042"	"7/92"	"7"	"92"	"15762635.5966797"	"HCD"	"MS2"	"8.978235"	"217.3"	"38.615"	"38.2161"	"10045"	"10045"	"10023"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"287.6"	""	"328.2"	""	"347.8"	""	"327.9"	"5.7"	"362.8"	"397.0"	""	"691"	"48"	"35.000"	"28.000"	"0.000608762724035219"	"15"	"0.0001308"	"0.0002145"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFTGSTQVGK"	"[K].vAFTGSTQVGk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"776.95801"	"1552.90874"	"1552.90991"	"-0.76"	"-0.00059"	"10/92"	"10"	"92"	"11529943.7288208"	"HCD"	"MS2"	"23.91055"	"727.0"	"88.928"	"38.2476"	"10101"	"10101"	"10081"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1000.7"	""	"1259.9"	""	"1292.0"	""	"953.8"	"11.2"	"1056.2"	"1296.5"	""	"696"	"62"	"35.000"	"28.000"	"1.97051272585312E-05"	"24"	"0"	"2.341E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFTGSTQVGK"	"[K].vAFTGSTQVGk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"518.30780"	"1552.90885"	"1552.90991"	"-0.69"	"-0.00036"	"7/92"	"7"	"92"	"25825637.9996338"	"HCD"	"MS2"	"11.03305"	"242.3"	"31.916"	"38.2866"	"10117"	"10117"	"10097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"311.9"	""	"384.5"	""	"393.9"	""	"367.0"	"0.0"	"409.4"	"426.5"	""	"696"	"39"	"35.000"	"28.000"	"0.00442159788612572"	"15"	"0.0001889"	"0.000424"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFSSNGGVVK"	"[K].sLFSSNGGVVk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"776.95813"	"1552.90898"	"1552.90991"	"-0.60"	"-0.00047"	"10/98"	"10"	"98"	"4791762.35571289"	"HCD"	"MS2"	"0"	"378.2"	"100.000"	"42.5429"	"11813"	"11813"	"11788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"611.4"	""	"513.4"	""	"467.1"	""	"628.6"	""	"679.2"	"681.4"	""	"696"	"68"	"35.000"	"28.000"	"5.29150540346907E-06"	""	"0"	"1.863E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFTGSTQVGK"	"[K].vAFTGSTQVGk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"776.95850"	"1552.90972"	"1552.90991"	"-0.13"	"-0.00010"	"10/92"	"10"	"92"	"12390581.6960449"	"HCD"	"MS2"	"33.8666"	"663.9"	"72.414"	"38.1313"	"10010"	"10010"	"9991"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"956.8"	""	"1167.4"	""	"1134.0"	""	"911.6"	""	"980.5"	"1128.3"	""	"669"	"62"	"35.000"	"28.000"	"1.93373127857213E-05"	"18"	"0"	"2.58E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTSGIFETK"	"[R].vLTSGIFETk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"776.97101"	"1552.93474"	"1552.93507"	"-0.21"	"-0.00016"	"16/84"	"16"	"84"	"5177121.97686768"	"HCD"	"MS2"	"21.8967"	"396.3"	"100.000"	"55.8834"	"17276"	"17276"	"17253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"476.3"	""	"594.7"	""	"518.1"	""	"628.0"	"1.1"	"781.3"	"759.9"	""	"454"	"60"	"33.000"	"26.000"	"2.47187131186689E-05"	"23"	"0"	"5.97E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTSGIFETK"	"[R].vLTSGIFETk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"776.97192"	"1552.93657"	"1552.93507"	"0.97"	"0.00075"	"16/84"	"16"	"84"	"4799945.07232666"	"HCD"	"MS2"	"44.42054"	"361.5"	"100.000"	"55.6748"	"17137"	"17137"	"17115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"441.9"	""	"522.1"	""	"488.3"	""	"540.1"	""	"717.8"	"723.5"	""	"471"	"60"	"33.000"	"26.000"	"2.63627621556514E-05"	"23"	"0"	"5.96E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTSGIFETK"	"[R].vLTSGIFETk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"518.31726"	"1552.93723"	"1552.93507"	"1.39"	"0.00072"	"10/84"	"10"	"84"	"5353008.7487793"	"HCD"	"MS2"	"35.02629"	"158.1"	"100.000"	"55.9706"	"17312"	"17312"	"17285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.6"	""	"224.5"	""	"206.4"	""	"259.0"	""	"313.9"	"313.9"	""	"464"	"23"	"33.000"	"26.000"	"0.107519685378819"	"20"	"0.0004166"	"0.002289"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTSGIFETK"	"[R].vLTSGIFETk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"518.31732"	"1552.93741"	"1552.93507"	"1.51"	"0.00078"	"11/84"	"11"	"84"	"4763797.38519287"	"HCD"	"MS2"	"22.85053"	"139.2"	"100.000"	"55.7922"	"17185"	"17185"	"17163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.4"	""	"191.6"	""	"192.0"	""	"206.0"	""	"297.0"	"275.0"	""	"464"	"21"	"33.000"	"26.000"	"0.178438262146493"	"17"	"0.0002723"	"0.00138"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTSGIFETK"	"[R].vLTSGIFETk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"776.97235"	"1552.93743"	"1552.93507"	"1.52"	"0.00118"	"9/84"	"9"	"84"	"1451526.93762207"	"HCD"	"MS2"	"52.1044"	"109.4"	"100.000"	"56.2077"	"17409"	"17409"	"17381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.7"	""	"128.3"	""	"119.7"	""	"233.5"	""	"231.6"	"224.5"	""	"464"	"20"	"33.000"	"26.000"	"0.251471044052919"	"23"	"0.0001889"	"0.0008165"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNILFDFVK"	"[R].vNILFDFVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"776.97809"	"1552.94890"	"1552.95032"	"-0.92"	"-0.00071"	"16/78"	"16"	"78"	"337731.000244141"	"HCD"	"MS2"	"0"	"28.4"	"100.000"	"83.1566"	"28383"	"28383"	"28365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.4"	""	"44.0"	""	"45.0"	""	"54.5"	""	"38.8"	"48.2"	""	"364"	"56"	"32.000"	"25.000"	"4.80918393832594E-05"	"24"	"0"	"2.421E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNILFDFVK"	"[R].vNILFDFVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"776.97839"	"1552.94951"	"1552.95032"	"-0.52"	"-0.00041"	"16/78"	"16"	"78"	"444792.88848877"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"83.1803"	"28342"	"28342"	"28319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.2"	""	"52.8"	""	"69.4"	""	"62.8"	""	"58.5"	"72.8"	""	"366"	"50"	"32.000"	"25.000"	"0.000204857132674489"	"19"	"0"	"1.995E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEILQIHTK"	"[R].lEILQIHTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"518.33191"	"1552.98117"	"1552.98268"	"-0.97"	"-0.00050"	"7/84"	"7"	"84"	"15540444.0440674"	"HCD"	"MS2"	"13.03659"	"244.7"	"53.514"	"47.3137"	"13796"	"13796"	"13778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"302.6"	""	"367.6"	""	"394.2"	""	"394.3"	""	"428.7"	"430.3"	""	"224"	"41"	"30.000"	"23.000"	"0.000991329483010536"	"21"	"0.0001889"	"0.0006679"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEILQIHTK"	"[R].lEILQIHTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"518.33209"	"1552.98172"	"1552.98268"	"-0.62"	"-0.00032"	"7/84"	"7"	"84"	"16298280.5709229"	"HCD"	"MS2"	"11.28796"	"265.5"	"56.203"	"47.0112"	"13625"	"13625"	"13608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.1"	""	"391.8"	""	"397.1"	""	"417.2"	""	"483.8"	"475.2"	""	"222"	"41"	"30.000"	"23.000"	"0.000813435231784183"	"17"	"0.0001889"	"0.000415"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGITALHIK"	"[K].eLGITALHIk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"518.33209"	"1552.98172"	"1552.98268"	"-0.62"	"-0.00032"	"8/80"	"8"	"80"	"20431226.131958"	"HCD"	"MS2"	"5.199585"	"516.0"	"100.000"	"46.7025"	"13498"	"13498"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"828.3"	""	"948.6"	""	"1004.0"	""	"757.8"	"7.5"	"714.6"	"602.8"	""	"222"	"51"	"30.000"	"23.000"	"9.77964249038897E-05"	""	"0"	"3.38E-06"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGITALHIK"	"[K].eLGITALHIk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"518.33252"	"1552.98301"	"1552.98268"	"0.21"	"0.00011"	"12/80"	"12"	"80"	"23785537.9778442"	"HCD"	"MS2"	"4.146231"	"510.4"	"85.766"	"46.9966"	"13667"	"13667"	"13650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"829.0"	""	"921.8"	""	"990.5"	""	"762.9"	"9.4"	"707.7"	"588.7"	""	"215"	"48"	"30.000"	"23.000"	"0.00016611485225038"	""	"0"	"1.032E-05"	"1.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLNLVPVQK"	"[K].aLLNLVPVQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"518.34412"	"1553.01780"	"1553.01907"	"-0.82"	"-0.00042"	"10/86"	"10"	"86"	"5882849.06677246"	"HCD"	"MS2"	"8.096575"	"133.1"	"96.887"	"63.0108"	"20182"	"20182"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.7"	"2.3"	"137.6"	""	"158.8"	""	"243.9"	""	"287.7"	"288.1"	""	"86"	"50"	"26.000"	"19.000"	"4.74753806557892E-05"	"19"	"0.0001308"	"0.0002938"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLNLVPVQK"	"[K].aLLNLVPVQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"777.01270"	"1553.01811"	"1553.01907"	"-0.62"	"-0.00048"	"8/86"	"8"	"86"	"2963332.58966064"	"HCD"	"MS2"	"13.00087"	"165.4"	"100.000"	"63.0085"	"20181"	"20181"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.6"	""	"171.8"	""	"194.0"	""	"297.4"	"1.5"	"365.2"	"336.1"	""	"86"	"49"	"26.000"	"19.000"	"5.02884738138545E-05"	""	"0"	"8.265E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLNLVPVQK"	"[K].aLLNLVPVQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"518.34436"	"1553.01853"	"1553.01907"	"-0.35"	"-0.00018"	"10/86"	"10"	"86"	"5330564.86206055"	"HCD"	"MS2"	"8.184031"	"127.8"	"100.000"	"62.9229"	"20093"	"20093"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.3"	""	"135.5"	""	"137.7"	""	"239.1"	""	"295.4"	"268.0"	""	"86"	"41"	"26.000"	"19.000"	"0.000310076216048647"	"16"	"0.0001308"	"0.0002177"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLNLVPVQK"	"[K].aLLNLVPVQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"777.01294"	"1553.01860"	"1553.01907"	"-0.30"	"-0.00023"	"15/86"	"15"	"86"	"3543104.37182617"	"HCD"	"MS2"	"38.3836"	"195.3"	"100.000"	"62.7022"	"20056"	"20056"	"20035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"233.9"	""	"203.7"	""	"229.5"	""	"365.8"	""	"437.4"	"386.8"	""	"84"	"55"	"26.000"	"19.000"	"1.29493893910473E-05"	""	"0"	"7.46E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLNLVPVQK"	"[K].aLLNLVPVQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"518.34454"	"1553.01908"	"1553.01907"	"0.00"	"0.00000"	"10/86"	"10"	"86"	"8226365.77630615"	"HCD"	"MS2"	"38.09204"	"181.1"	"100.000"	"62.7090"	"20059"	"20059"	"20035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.6"	""	"178.1"	""	"209.8"	""	"373.6"	""	"372.8"	"371.7"	""	"83"	"40"	"26.000"	"19.000"	"0.000432561733198221"	"18"	"0.0001889"	"0.0004228"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLNLVPVQK"	"[K].aLLNLVPVQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"777.01331"	"1553.01933"	"1553.01907"	"0.17"	"0.00013"	"8/86"	"8"	"86"	"2709686.12298584"	"HCD"	"MS2"	"14.53425"	"157.3"	"100.000"	"62.9201"	"20092"	"20092"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.2"	""	"173.5"	""	"182.9"	""	"302.1"	""	"321.0"	"332.3"	""	"83"	"52"	"26.000"	"19.000"	"2.89766447692026E-05"	"19"	"0.0001859"	"0.0003228"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLNLVPVQK"	"[K].aLLNLVPVQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"777.01337"	"1553.01946"	"1553.01907"	"0.25"	"0.00019"	"9/86"	"9"	"86"	"4210987.5869751"	"HCD"	"MS2"	"22.42526"	"239.6"	"100.000"	"62.6138"	"19967"	"19967"	"19945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"287.0"	""	"248.3"	""	"256.0"	""	"465.8"	"1.6"	"529.9"	"489.3"	""	"83"	"64"	"26.000"	"19.000"	"1.49295974089633E-06"	""	"0"	"0.0001769"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLNLVPVQK"	"[K].aLLNLVPVQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"518.34479"	"1553.01981"	"1553.01907"	"0.48"	"0.00025"	"10/86"	"10"	"86"	"9911949.68945313"	"HCD"	"MS2"	"24.76676"	"213.4"	"100.000"	"62.6206"	"19970"	"19970"	"19945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.2"	""	"207.0"	""	"245.0"	""	"426.5"	""	"471.2"	"426.8"	""	"80"	"42"	"26.000"	"19.000"	"0.000281877227586859"	"17"	"0.0001889"	"0.0004456"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEPVLLLGK"	"[K].lLEPVLLLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"518.35223"	"1553.04215"	"1553.04422"	"-1.34"	"-0.00069"	"11/72"	"11"	"72"	"5481156.40386963"	"HCD"	"MS2"	"4.957417"	"134.8"	"100.000"	"81.2320"	"27599"	"27599"	"27582"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.0"	""	"184.3"	""	"232.3"	""	"220.5"	"1.1"	"239.5"	"216.1"	""	"52"	"39"	"24.000"	"17.000"	"0.000353975617441147"	""	"0.0001859"	"0.0003312"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEPVLLLGK"	"[K].lLEPVLLLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"777.02515"	"1553.04302"	"1553.04422"	"-0.78"	"-0.00060"	"8/72"	"8"	"72"	"6429580.69171143"	"HCD"	"MS2"	"5.421328"	"276.7"	"79.576"	"81.2047"	"27537"	"27537"	"27520"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.8"	""	"402.4"	""	"444.7"	""	"481.2"	""	"478.4"	"423.7"	""	"52"	"53"	"24.000"	"17.000"	"1.30609073275821E-05"	""	"0"	"0.0001596"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEPVLLLGK"	"[K].lLEPVLLLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"777.02515"	"1553.04302"	"1553.04422"	"-0.78"	"-0.00060"	"8/72"	"8"	"72"	"6834807.49450684"	"HCD"	"MS2"	"4.897048"	"310.4"	"84.563"	"81.1928"	"27583"	"27583"	"27566"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"435.9"	""	"439.7"	""	"521.9"	""	"530.7"	"2.9"	"522.9"	"481.4"	""	"52"	"53"	"24.000"	"17.000"	"1.23587158745129E-05"	""	"0"	"8.445E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEPVLLLGK"	"[K].lLEPVLLLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.8163"	"0.0000"	"1"	"1"	"1"	"518.35254"	"1553.04306"	"1553.04422"	"-0.75"	"-0.00039"	"11/72"	"11"	"72"	"5166493.35046387"	"HCD"	"MS2"	"3.734069"	"139.2"	"100.000"	"81.2439"	"27553"	"27553"	"27536"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.6"	""	"183.8"	""	"244.2"	""	"237.9"	""	"249.3"	"220.0"	""	"52"	"49"	"24.000"	"17.000"	"3.53975617441147E-05"	""	"0.0001308"	"0.0002779"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEPVLLLGK"	"[K].lLEPVLLLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"518.35266"	"1553.04343"	"1553.04422"	"-0.51"	"-0.00026"	"11/72"	"11"	"72"	"4330654.44580078"	"HCD"	"MS2"	"8.644498"	"102.3"	"100.000"	"80.9248"	"27473"	"27473"	"27454"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.8"	""	"148.9"	""	"168.5"	""	"198.8"	"1.1"	"164.7"	"137.8"	""	"52"	"45"	"24.000"	"17.000"	"8.6690867318441E-05"	""	"0"	"0.0001335"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEPVLLLGK"	"[K].lLEPVLLLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.7234"	"0.0000"	"1"	"1"	"1"	"518.35278"	"1553.04380"	"1553.04422"	"-0.27"	"-0.00014"	"11/72"	"11"	"72"	"4234227.61645508"	"HCD"	"MS2"	"8.198006"	"109.7"	"100.000"	"80.9346"	"27426"	"27426"	"27408"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.0"	""	"155.0"	""	"172.1"	""	"214.8"	""	"184.0"	"159.7"	""	"52"	"47"	"24.000"	"17.000"	"5.70129283191116E-05"	""	"0.0001859"	"0.0003384"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEPVLLLGK"	"[K].lLEPVLLLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.9804"	"0.0000"	"1"	"1"	"1"	"777.02582"	"1553.04436"	"1553.04422"	"0.09"	"0.00007"	"8/72"	"8"	"72"	"2021419.12774658"	"HCD"	"MS2"	"35.16276"	"111.1"	"100.000"	"80.8788"	"27455"	"27455"	"27438"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.6"	""	"160.8"	""	"176.3"	""	"195.0"	"0.7"	"194.5"	"167.1"	""	"52"	"51"	"24.000"	"17.000"	"2.11823113845418E-05"	"17"	"0"	"0.000173"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEPVLLLGK"	"[K].lLEPVLLLGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"777.02594"	"1553.04460"	"1553.04422"	"0.25"	"0.00019"	"8/72"	"8"	"72"	"2077310.64215088"	"HCD"	"MS2"	"42.0823"	"121.0"	"100.000"	"80.8909"	"27409"	"27409"	"27392"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.3"	""	"173.6"	""	"176.9"	""	"209.4"	""	"211.2"	"185.1"	""	"52"	"52"	"24.000"	"17.000"	"1.48584445534685E-05"	"17"	"0"	"7.007E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFEDYGLFMR"	"[K].fFEDYGLFMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"777.38611"	"1553.76494"	"1553.76600"	"-0.68"	"-0.00053"	"7/74"	"7"	"74"	"470474.18572998"	"HCD"	"MS2"	"16.34531"	"32.1"	"100.000"	"77.5409"	"26093"	"26093"	"26069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.6"	""	"56.3"	""	"53.5"	""	"38.8"	""	"58.7"	"54.1"	""	"651"	"39"	"35.000"	"28.000"	"0.00403228288915635"	"27"	"7.476E-05"	"0.0001852"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFEDYGLFMR"	"[K].fFEDYGLFMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"777.38702"	"1553.76677"	"1553.76600"	"0.49"	"0.00038"	"9/74"	"9"	"74"	"398580.955505371"	"HCD"	"MS2"	"14.589"	"29.0"	"100.000"	"77.5559"	"26048"	"26048"	"26025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.2"	""	"49.0"	""	"44.1"	""	"35.4"	"1.2"	"55.0"	"51.7"	""	"655"	"34"	"35.000"	"28.000"	"0.0123939946494848"	"21"	"0"	"7.061E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGQYSSPDTK"	"[K].lGQYSSPDTk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"777.43164"	"1553.85600"	"1553.85754"	"-0.99"	"-0.00077"	"7/94"	"7"	"94"	"253013.049865723"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"34.7837"	"8637"	"8637"	"8606"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.7"	""	"39.6"	""	"27.6"	""	"44.8"	""	"54.0"	"42.1"	""	"849"	"40"	"36.000"	"29.000"	"0.00438407216745713"	"21"	"0.0001308"	"0.0002517"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NKPAYFAER"	"[R].nkPAYFAER.[L]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"518.63208"	"1553.88169"	"1553.88403"	"-1.51"	"-0.00078"	"4/80"	"4"	"80"	"7558787.49731445"	"HCD"	"MS2"	"8.523047"	"384.1"	"94.582"	"30.5366"	"6911"	"6911"	"6888"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"613.3"	""	"543.1"	""	"573.5"	""	"557.0"	"0.9"	"671.8"	"674.8"	""	"801"	"3"	"36.000"	"29.000"	"18.5610491354383"	"13"	"0.0001859"	"0.000325"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NKPAYFAER"	"[R].nkPAYFAER.[L]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"518.63257"	"1553.88315"	"1553.88403"	"-0.57"	"-0.00029"	"7/80"	"7"	"80"	"12064307.7200317"	"HCD"	"MS2"	"14.81534"	"619.8"	"100.000"	"30.5392"	"6953"	"6953"	"6933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"999.0"	""	"826.0"	""	"905.9"	""	"931.5"	"2.0"	"1107.7"	"1094.4"	""	"813"	"5"	"36.000"	"29.000"	"13.3370736650483"	"13"	"0.0001889"	"0.0006798"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFSSNGGVVK"	"[K].sLFSSnGGVVk.[G]"	"N-Term(TMT6plex); N6(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"777.45001"	"1553.89275"	"1553.89393"	"-0.76"	"-0.00059"	"10/98"	"10"	"98"	"8003492.0793457"	"HCD"	"MS2"	"35.80252"	"560.8"	"100.000"	"47.5775"	"13856"	"13856"	"13832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"742.6"	""	"677.1"	""	"704.5"	""	"970.4"	"1.7"	"1107.3"	"1117.2"	""	"745"	"44"	"35.000"	"28.000"	"0.00160371162408162"	"23"	"0"	"6.962E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFSSNGGVVK"	"[K].sLFSSnGGVVk.[G]"	"N-Term(TMT6plex); N6(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"777.45020"	"1553.89311"	"1553.89393"	"-0.52"	"-0.00041"	"15/98"	"15"	"98"	"1921154.57830811"	"HCD"	"MS2"	"47.30706"	"172.0"	"100.000"	"48.0823"	"14111"	"14111"	"14082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"215.7"	""	"205.8"	""	"202.7"	""	"315.3"	"2.6"	"341.4"	"348.6"	""	"742"	"55"	"35.000"	"28.000"	"0.000115179160719562"	""	"0"	"8.531E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFSSNGGVVK"	"[K].sLFSSnGGVVk.[G]"	"N-Term(TMT6plex); N6(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"777.45068"	"1553.89409"	"1553.89393"	"0.10"	"0.00008"	"10/98"	"10"	"98"	"2452149.60296631"	"HCD"	"MS2"	"0"	"227.5"	"100.000"	"45.4647"	"13045"	"13045"	"13019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.2"	""	"292.3"	""	"266.8"	""	"420.6"	"0.1"	"443.9"	"444.6"	""	"731"	"68"	"35.000"	"28.000"	"5.67397452139679E-06"	""	"0"	"5.04E-06"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSTLDNLFK"	"[K].aSSTLDNLFk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02634"	"Protein S100-G OS=Rattus norvegicus OX=10116 GN=S100g PE=1 SV=3"	"P02634"	"Protein S100-G OS=Rattus norvegicus OX=10116 GN=S100g PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"777.45081"	"1553.89433"	"1553.89393"	"0.26"	"0.00020"	"8/86"	"8"	"86"	"1757064.25762939"	"HCD"	"MS2"	"26.07312"	"184.1"	"100.000"	"53.0239"	"16124"	"16124"	"16102"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.0"	""	"185.7"	""	"282.3"	""	"387.9"	"0.1"	"410.7"	"257.8"	""	"741"	"40"	"35.000"	"28.000"	"0.00342600673444111"	"15"	"0"	"8.742E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFSSNGGVVK"	"[K].sLFSSnGGVVk.[G]"	"N-Term(TMT6plex); N6(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"777.45715"	"1553.90703"	"1553.89393"	"8.43"	"0.00655"	"9/98"	"9"	"98"	"1430302.53601074"	"HCD"	"MS2"	"0"	"130.8"	"100.000"	"47.7351"	"13969"	"13969"	"13938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.5"	""	"170.5"	""	"142.7"	""	"228.2"	""	"265.3"	"279.5"	""	"651"	"39"	"35.000"	"28.000"	"0.00405089506131586"	"19"	"0.0002277"	"0.001219"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSISGTYNLK"	"[K].lSISGTYNLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9265"	"0.0000"	"1"	"1"	"1"	"777.46832"	"1553.92937"	"1553.93031"	"-0.61"	"-0.00047"	"18/84"	"18"	"84"	"11846079.9255371"	"HCD"	"MS2"	"5.620148"	"864.0"	"100.000"	"49.0306"	"14498"	"14498"	"14479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1369.0"	""	"1464.7"	""	"1294.2"	""	"1347.2"	"7.9"	"1300.5"	"1379.0"	""	"504"	"68"	"34.000"	"27.000"	"3.86723479665422E-06"	"22"	"0"	"5.594E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSISGTYNLK"	"[K].lSISGTYNLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9265"	"0.0000"	"1"	"1"	"1"	"777.46844"	"1553.92961"	"1553.93031"	"-0.45"	"-0.00035"	"18/84"	"18"	"84"	"2635686.00994873"	"HCD"	"MS2"	"4.098619"	"235.4"	"100.000"	"49.0659"	"14465"	"14465"	"14447"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"339.8"	""	"353.1"	""	"349.5"	""	"353.6"	"2.5"	"404.1"	"425.6"	""	"504"	"68"	"34.000"	"27.000"	"4.39947182535967E-06"	"22"	"0"	"4.959E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSISGTYNLK"	"[K].lSISGTYNLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.8448"	"0.0000"	"1"	"1"	"1"	"518.64807"	"1553.92966"	"1553.93031"	"-0.42"	"-0.00022"	"8/84"	"8"	"84"	"20877480.4953613"	"HCD"	"MS2"	"14.31786"	"497.2"	"99.190"	"48.7624"	"14341"	"14341"	"14319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"722.8"	""	"804.7"	""	"729.6"	""	"798.2"	"0.9"	"798.2"	"848.2"	""	"504"	"58"	"34.000"	"27.000"	"3.79664980679059E-05"	"25"	"0.0001308"	"0.0002555"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSISGTYNLK"	"[K].lSISGTYNLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9265"	"0.0000"	"1"	"1"	"1"	"777.46875"	"1553.93022"	"1553.93031"	"-0.06"	"-0.00005"	"18/84"	"18"	"84"	"12726143.6895752"	"HCD"	"MS2"	"2.140656"	"923.3"	"100.000"	"48.7554"	"14338"	"14338"	"14319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1428.8"	""	"1495.5"	""	"1400.6"	""	"1438.3"	""	"1428.9"	"1535.0"	""	"497"	"68"	"33.000"	"26.000"	"3.56719124188383E-06"	"22"	"0"	"6.845E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSISGTYNLK"	"[K].lSISGTYNLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9559"	"0.0000"	"1"	"1"	"1"	"777.46887"	"1553.93047"	"1553.93031"	"0.10"	"0.00008"	"18/84"	"18"	"84"	"2925758.95812988"	"HCD"	"MS2"	"6.662827"	"249.3"	"100.000"	"49.3410"	"14625"	"14625"	"14606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"359.9"	""	"387.3"	""	"344.8"	""	"372.4"	"0.6"	"435.2"	"460.2"	""	"497"	"68"	"33.000"	"26.000"	"4.03948865803995E-06"	"20"	"0"	"5.119E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSISGTYNLK"	"[K].lSISGTYNLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"518.64856"	"1553.93113"	"1553.93031"	"0.52"	"0.00027"	"8/84"	"8"	"84"	"13183679.8450928"	"HCD"	"MS2"	"50.5486"	"308.2"	"100.000"	"49.0191"	"14494"	"14494"	"14463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"426.0"	""	"513.1"	""	"469.3"	""	"501.4"	""	"494.7"	"516.8"	""	"492"	"45"	"33.000"	"26.000"	"0.000818342501103252"	"18"	"0.0001889"	"0.001094"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YKELGEK"	"[K].ykELGEk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"518.65466"	"1553.94944"	"1553.95061"	"-0.75"	"-0.00039"	"3/64"	"3"	"64"	"30142402.0478516"	"HCD"	"MS2"	"12.42793"	"1053.4"	"57.766"	"31.9197"	"7517"	"7517"	"7498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2116.3"	""	"1616.1"	""	"1696.2"	""	"1293.3"	""	"1574.2"	"1651.3"	""	"364"	"0"	"32.000"	"25.000"	"16.4464204217459"	"13"	"0.001058"	"0.01425"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"YKELGEK"	"[K].ykELGEk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"518.65485"	"1553.94999"	"1553.95061"	"-0.40"	"-0.00021"	"3/64"	"3"	"64"	"31231353.4180908"	"HCD"	"MS2"	"14.36156"	"1025.0"	"52.712"	"31.7756"	"7416"	"7416"	"7398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2011.4"	""	"1647.2"	""	"1646.1"	""	"1290.6"	""	"1503.3"	"1584.1"	""	"360"	"1"	"32.000"	"25.000"	"13.7174221804574"	"13"	"0.002033"	"0.0316"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPILQLNNVK"	"[K].gPILQLNNVk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"518.66400"	"1553.97745"	"1553.97793"	"-0.31"	"-0.00016"	"10/84"	"10"	"84"	"14212340.5704956"	"HCD"	"MS2"	"42.89059"	"331.8"	"100.000"	"47.8480"	"14015"	"14015"	"13986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"412.9"	""	"402.3"	""	"426.5"	""	"583.7"	""	"671.8"	"652.1"	""	"223"	"37"	"30.000"	"23.000"	"0.00232420733465347"	"16"	"0.0001308"	"0.0002871"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPILQLNNVK"	"[K].gPILQLNNVk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"777.49261"	"1553.97795"	"1553.97793"	"0.01"	"0.00001"	"9/84"	"9"	"84"	"8534470.05889893"	"HCD"	"MS2"	"48.9386"	"609.8"	"94.313"	"47.9422"	"14053"	"14053"	"14034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"796.0"	""	"710.6"	""	"777.2"	""	"1056.6"	""	"1219.1"	"1228.9"	""	"219"	"39"	"30.000"	"23.000"	"0.00134714430403956"	"23"	"0.0001889"	"0.0009242"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPILQLNNVK"	"[K].gPILQLNNVk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"777.49274"	"1553.97820"	"1553.97793"	"0.17"	"0.00013"	"9/84"	"9"	"84"	"5822465.3137207"	"HCD"	"MS2"	"57.837"	"439.0"	"100.000"	"47.5543"	"13847"	"13847"	"13816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"578.3"	""	"503.1"	""	"545.9"	""	"797.2"	""	"885.1"	"860.0"	""	"219"	"38"	"30.000"	"23.000"	"0.00156824574970453"	"23"	"0.0001889"	"0.000882"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPILQLNNVK"	"[K].gPILQLNNVk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"518.66461"	"1553.97928"	"1553.97793"	"0.87"	"0.00045"	"9/84"	"9"	"84"	"8492870.12768555"	"HCD"	"MS2"	"34.3693"	"233.8"	"100.000"	"47.5452"	"13843"	"13843"	"13816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.6"	""	"292.3"	""	"307.6"	""	"415.5"	""	"472.4"	"439.6"	""	"217"	"20"	"30.000"	"23.000"	"0.101491515645009"	"14"	"0.000523"	"0.002874"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLKPAPVK"	"[K].nLkPAPVk.[V]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"777.51971"	"1554.03215"	"1554.03461"	"-1.58"	"-0.00123"	"12/72"	"12"	"72"	"1026200.06103516"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"31.2865"	"7258"	"7258"	"7232"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.0"	""	"131.8"	""	"79.7"	""	"111.3"	""	"114.2"	"113.4"	""	"59"	"30"	"24.000"	"17.000"	"0.00304664614699612"	"14"	"0.0001889"	"0.0008324"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLKPAPVK"	"[K].nLkPAPVk.[V]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"518.68262"	"1554.03330"	"1554.03461"	"-0.84"	"-0.00044"	"5/72"	"5"	"72"	"77241096.5779419"	"HCD"	"MS2"	"33.03997"	"3216.2"	"61.473"	"31.0847"	"7133"	"7133"	"7110"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5965.7"	""	"6527.8"	""	"3670.2"	""	"5230.6"	""	"4726.5"	"4387.5"	""	"59"	"6"	"24.000"	"17.000"	"0.68049042067242"	"13"	"0.0006737"	"0.00662"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLKPAPVK"	"[K].nLkPAPVk.[V]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"518.68329"	"1554.03531"	"1554.03461"	"0.45"	"0.00023"	"5/72"	"5"	"72"	"74230506.3016357"	"HCD"	"MS2"	"22.85839"	"3563.5"	"68.185"	"31.1970"	"7221"	"7221"	"7200"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6458.9"	""	"7075.6"	""	"4042.9"	""	"5843.6"	""	"5250.9"	"5018.6"	""	"57"	"6"	"24.000"	"17.000"	"0.674287113783441"	"13"	"0.0006037"	"0.004365"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLKPAPVK"	"[K].nLkPAPVk.[V]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"777.52185"	"1554.03642"	"1554.03461"	"1.17"	"0.00091"	"11/72"	"11"	"72"	"1363204.5680542"	"HCD"	"MS2"	"0"	"96.1"	"100.000"	"31.1419"	"7157"	"7157"	"7126"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.0"	""	"184.5"	""	"105.1"	""	"157.0"	"0.3"	"143.3"	"143.1"	""	"59"	"29"	"24.000"	"17.000"	"0.00380033617749475"	"14"	"0.0002277"	"0.001343"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVFDTELK"	"[K].mNVFDTELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"777.93347"	"1554.85967"	"1554.86019"	"-0.33"	"-0.00026"	"14/82"	"14"	"82"	"2619951.1875"	"HCD"	"MS2"	"51.23958"	"209.8"	"100.000"	"54.7783"	"16770"	"16770"	"16752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.2"	""	"292.1"	""	"325.0"	""	"211.6"	""	"425.3"	"390.3"	""	"810"	"25"	"36.000"	"29.000"	"0.121466082019"	"14"	"0.0001308"	"0.0002634"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVFDTELK"	"[K].mNVFDTELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"777.93372"	"1554.86016"	"1554.86019"	"-0.02"	"-0.00002"	"8/82"	"8"	"82"	"2614220.06439209"	"HCD"	"MS2"	"14.10595"	"219.2"	"100.000"	"55.0281"	"16926"	"16926"	"16901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.7"	""	"316.7"	""	"331.4"	""	"210.6"	""	"452.2"	"427.5"	""	"810"	"36"	"36.000"	"29.000"	"0.010338440275778"	"20"	"0"	"0.0001336"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIK"	"[K].vLIVEPEGIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"518.99988"	"1554.98508"	"1554.98710"	"-1.30"	"-0.00067"	"12/76"	"12"	"76"	"12479909.7596436"	"HCD"	"MS2"	"26.07736"	"301.2"	"100.000"	"55.3473"	"17057"	"17057"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"532.6"	""	"477.6"	""	"394.5"	""	"559.1"	""	"435.6"	"444.1"	""	"240"	"49"	"30.000"	"23.000"	"0.000156020349363995"	"19"	"0.0001859"	"0.0003258"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIK"	"[K].vLIVEPEGIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8281"	"0.0000"	"1"	"1"	"1"	"777.99652"	"1554.98577"	"1554.98710"	"-0.86"	"-0.00067"	"16/76"	"16"	"76"	"5889367.76934814"	"HCD"	"MS2"	"0"	"329.7"	"100.000"	"55.2966"	"17036"	"17036"	"17013"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"640.9"	""	"556.7"	""	"456.5"	""	"595.3"	"3.2"	"418.4"	"436.7"	""	"240"	"64"	"30.000"	"23.000"	"5.27449938525389E-06"	""	"0"	"5.868E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIK"	"[K].vLIVEPEGIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"519.00024"	"1554.98618"	"1554.98710"	"-0.59"	"-0.00031"	"12/76"	"12"	"76"	"8369166.24719238"	"HCD"	"MS2"	"9.198968"	"172.4"	"89.908"	"55.6507"	"17181"	"17181"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"297.1"	""	"266.3"	""	"228.7"	""	"300.1"	"1.6"	"254.2"	"280.9"	""	"240"	"48"	"30.000"	"23.000"	"0.000186715875792609"	"17"	"0.0005564"	"0.00336"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIK"	"[K].vLIVEPEGIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"519.00031"	"1554.98636"	"1554.98710"	"-0.48"	"-0.00025"	"12/76"	"12"	"76"	"8804321.04095459"	"HCD"	"MS2"	"12.71025"	"167.6"	"80.114"	"55.4402"	"17041"	"17041"	"17019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.2"	""	"266.3"	""	"238.9"	""	"307.2"	"0.9"	"240.1"	"259.8"	""	"240"	"53"	"30.000"	"23.000"	"6.5190039779092E-05"	"19"	"0.0001889"	"0.0006428"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIK"	"[K].vLIVEPEGIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"777.99689"	"1554.98650"	"1554.98710"	"-0.39"	"-0.00030"	"15/76"	"15"	"76"	"5278412.97540283"	"HCD"	"MS2"	"29.05963"	"290.6"	"100.000"	"55.0956"	"16900"	"16900"	"16875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"575.0"	""	"506.3"	""	"374.6"	""	"527.5"	"2.2"	"375.8"	"377.5"	""	"239"	"58"	"30.000"	"23.000"	"1.97409434888367E-05"	""	"0"	"4.021E-05"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIK"	"[K].vLIVEPEGIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"519.00037"	"1554.98655"	"1554.98710"	"-0.36"	"-0.00019"	"12/76"	"12"	"76"	"10544983.1553345"	"HCD"	"MS2"	"26.90818"	"255.9"	"100.000"	"55.1391"	"16918"	"16918"	"16891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"422.9"	""	"381.1"	""	"336.6"	""	"482.4"	""	"404.0"	"392.9"	""	"239"	"53"	"30.000"	"23.000"	"6.50680670146693E-05"	"18"	"0.0003839"	"0.001562"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIK"	"[K].vLIVEPEGIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"777.99750"	"1554.98772"	"1554.98710"	"0.40"	"0.00031"	"16/76"	"16"	"76"	"13941461.6461182"	"HCD"	"MS2"	"0.5983368"	"384.8"	"51.740"	"55.3875"	"17020"	"17020"	"17003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"703.4"	""	"621.1"	""	"548.9"	""	"677.7"	""	"521.5"	"558.6"	""	"242"	"64"	"30.000"	"23.000"	"5.2093719869497E-06"	""	"0"	"0.0001207"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIK"	"[K].vLIVEPEGIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8281"	"0.0000"	"1"	"1"	"1"	"777.99792"	"1554.98857"	"1554.98710"	"0.95"	"0.00074"	"16/76"	"16"	"76"	"12195010.5246582"	"HCD"	"MS2"	"0"	"393.7"	"57.159"	"55.5933"	"17158"	"17158"	"17141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"720.3"	""	"637.2"	""	"534.4"	""	"708.7"	"3.9"	"528.3"	"581.1"	""	"219"	"64"	"30.000"	"23.000"	"4.81298068904418E-06"	""	"0"	"0.0001049"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKPLEVELR"	"[K].lkPLEVELR.[R]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"519.00354"	"1554.99607"	"1554.99833"	"-1.46"	"-0.00076"	"5/82"	"5"	"82"	"32888144.489502"	"HCD"	"MS2"	"9.977613"	"780.7"	"57.576"	"42.6118"	"11841"	"11841"	"11820"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"904.4"	""	"879.4"	""	"944.4"	""	"1382.5"	""	"1620.0"	"1696.9"	""	"180"	"10"	"29.000"	"22.000"	"0.989105255489269"	"13"	"0.0009404"	"0.009679"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKPLEVELR"	"[K].lkPLEVELR.[R]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"519.00409"	"1554.99771"	"1554.99833"	"-0.40"	"-0.00021"	"5/82"	"5"	"82"	"30733500.279541"	"HCD"	"MS2"	"12.85392"	"404.5"	"30.610"	"42.9162"	"12010"	"12010"	"11987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"479.2"	""	"471.4"	""	"495.3"	""	"699.7"	""	"868.9"	"831.8"	""	"176"	"9"	"29.000"	"22.000"	"1.00805138847207"	"13"	"0.0009404"	"0.01014"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFPFHFMLDR"	"[K].tFPFHFmLDR.[D]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"519.26831"	"1555.79038"	"1555.79289"	"-1.61"	"-0.00084"	"7/88"	"7"	"88"	"2717008.72900391"	"HCD"	"MS2"	"64.36308"	"65.0"	"100.000"	"54.3870"	"16664"	"16664"	"16637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.3"	""	"71.0"	""	"81.4"	""	"141.5"	""	"117.4"	"127.5"	""	"683"	"17"	"35.000"	"28.000"	"0.764523268821088"	"20"	"0.0001889"	"0.000802"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFPFHFMLDR"	"[K].tFPFHFmLDR.[D]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"519.26855"	"1555.79111"	"1555.79289"	"-1.14"	"-0.00059"	"9/88"	"9"	"88"	"3109828.20941162"	"HCD"	"MS2"	"0"	"65.7"	"100.000"	"54.2220"	"16543"	"16543"	"16525"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.4"	""	"81.7"	""	"90.1"	""	"142.8"	"1.4"	"117.2"	"115.6"	""	"683"	"22"	"35.000"	"28.000"	"0.234094229333584"	"19"	"0.0001889"	"0.0003869"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWLFGYDEQR"	"[R].lWLFGYDEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AZ50"	"Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1"	"Q6AZ50"	"Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.40863"	"1555.80998"	"1555.81064"	"-0.42"	"-0.00033"	"10/76"	"10"	"76"	"544536.800292969"	"HCD"	"MS2"	"42.67947"	"36.5"	"100.000"	"70.9784"	"23426"	"23426"	"23402"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.3"	""	"53.5"	""	"56.6"	""	"55.3"	"0.6"	"63.5"	"69.3"	""	"786"	"1"	"35.000"	"28.000"	"32.7636705555516"	"13"	"0.00103"	"0.01156"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSNFMDGLK"	"[R].iGSNFmDGLk.[D]"	"N-Term(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"778.43134"	"1555.85539"	"1555.85544"	"-0.03"	"-0.00002"	"9/92"	"9"	"92"	"1150971.72949219"	"HCD"	"MS2"	"0"	"97.7"	"100.000"	"43.2613"	"12098"	"12098"	"12076"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.4"	""	"103.0"	""	"147.6"	""	"224.8"	"0.6"	"185.0"	"147.7"	""	"752"	"39"	"35.000"	"28.000"	"0.00466861267654746"	"18"	"0.0006037"	"0.004554"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSNFMDGLK"	"[R].iGSNFmDGLk.[D]"	"N-Term(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"778.43213"	"1555.85698"	"1555.85544"	"0.99"	"0.00077"	"9/92"	"9"	"92"	"1178497.89978027"	"HCD"	"MS2"	"0"	"100.9"	"100.000"	"43.5093"	"12247"	"12247"	"12231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.9"	""	"113.2"	""	"150.6"	""	"207.1"	"0.3"	"213.3"	"152.9"	""	"755"	"37"	"35.000"	"28.000"	"0.00746306039142228"	"19"	"0.0007076"	"0.006768"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPETGLFTLR"	"[R].rHPETGLFTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"389.72754"	"1555.88833"	"1555.89063"	"-1.48"	"-0.00057"	"9/110"	"9"	"110"	"16692117.614502"	"HCD"	"MS2"	"20.844"	"273.8"	"100.000"	"31.0342"	"7112"	"7112"	"7094"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.9"	""	"396.6"	""	"402.0"	""	"433.0"	"7.7"	"496.0"	"506.9"	""	"660"	"26"	"35.000"	"28.000"	"0.0768270115029453"	"14"	"0.000523"	"0.00293"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPETGLFTLR"	"[R].rHPETGLFTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"389.72781"	"1555.88942"	"1555.89063"	"-0.77"	"-0.00030"	"10/110"	"10"	"110"	"16277156.3535156"	"HCD"	"MS2"	"11.7894"	"218.0"	"75.260"	"31.1650"	"7208"	"7208"	"7184"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"301.2"	""	"321.5"	""	"294.2"	""	"358.9"	"4.7"	"374.7"	"409.5"	""	"641"	"28"	"35.000"	"28.000"	"0.0492978562217123"	"14"	"0.000523"	"0.003026"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPTLYLDFK"	"[R].tPTLYLDFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"519.30890"	"1555.91214"	"1555.91360"	"-0.94"	"-0.00049"	"10/76"	"10"	"76"	"3263852.95294189"	"HCD"	"MS2"	"21.03959"	"75.8"	"100.000"	"61.4819"	"19558"	"19558"	"19539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.1"	""	"103.6"	""	"113.1"	""	"121.1"	"3.0"	"132.4"	"139.2"	""	"633"	"24"	"35.000"	"28.000"	"0.12863931368079"	"17"	"0.0008731"	"0.008978"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPTLYLDFK"	"[R].tPTLYLDFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"778.46008"	"1555.91289"	"1555.91360"	"-0.46"	"-0.00036"	"8/76"	"8"	"76"	"732033.232971191"	"HCD"	"MS2"	"31.5731"	"61.6"	"100.000"	"61.6667"	"19634"	"19634"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.9"	""	"80.7"	""	"85.4"	""	"101.5"	""	"115.1"	"122.0"	""	"635"	"25"	"35.000"	"28.000"	"0.0907284997521545"	"20"	"0.0003571"	"0.001518"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPTLYLDFK"	"[R].tPTLYLDFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"778.46063"	"1555.91399"	"1555.91360"	"0.25"	"0.00019"	"8/76"	"8"	"76"	"2690039.24835205"	"HCD"	"MS2"	"13.94895"	"220.8"	"100.000"	"61.3046"	"19486"	"19486"	"19459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"354.4"	""	"302.1"	""	"328.7"	""	"341.9"	"3.0"	"382.6"	"376.8"	""	"621"	"48"	"34.000"	"27.000"	"0.000476498573159181"	"22"	"0"	"0.0001726"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPTLYLDFK"	"[R].tPTLYLDFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"778.46069"	"1555.91411"	"1555.91360"	"0.33"	"0.00025"	"8/76"	"8"	"76"	"2369695.76959229"	"HCD"	"MS2"	"16.46691"	"189.9"	"100.000"	"61.1364"	"19364"	"19364"	"19337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"286.6"	""	"239.5"	""	"270.2"	""	"302.0"	""	"333.1"	"368.3"	""	"621"	"50"	"34.000"	"27.000"	"0.000295843208929344"	"23"	"0.0001889"	"0.0005507"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSILPFTPPVVK"	"[M].sSILPFTPPVVk.[R]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"O70436"	"Mothers against decapentaplegic homolog 2 OS=Rattus norvegicus OX=10116 GN=Smad2 PE=1 SV=1"	"O70436"	"Mothers against decapentaplegic homolog 2 OS=Rattus norvegicus OX=10116 GN=Smad2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"778.46796"	"1555.92864"	"1555.92970"	"-0.68"	"-0.00053"	"4/100"	"4"	"100"	"607414.883544922"	"HCD"	"MS2"	"12.18233"	"23.0"	"100.000"	"82.5037"	"28117"	"28117"	"28094"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.2"	""	"30.4"	""	"33.7"	""	"32.8"	""	"46.3"	"46.5"	""	"583"	"12"	"34.000"	"27.000"	"1.99819818010951"	"20"	"0.004913"	"0.1475"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSILPFTPPVVK"	"[M].sSILPFTPPVVk.[R]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"O70436"	"Mothers against decapentaplegic homolog 2 OS=Rattus norvegicus OX=10116 GN=Smad2 PE=1 SV=1"	"O70436"	"Mothers against decapentaplegic homolog 2 OS=Rattus norvegicus OX=10116 GN=Smad2 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"778.46826"	"1555.92925"	"1555.92970"	"-0.29"	"-0.00023"	"8/100"	"8"	"100"	"628132.772521973"	"HCD"	"MS2"	"35.26341"	"21.2"	"100.000"	"82.4788"	"28056"	"28056"	"28032"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.0"	""	"34.7"	""	"29.6"	""	"37.9"	""	"33.8"	"37.2"	""	"582"	"26"	"34.000"	"27.000"	"0.0717617447135193"	"15"	"0.0007076"	"0.00696"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGTPGAELLK"	"[R].lVGTPGAELLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"519.33197"	"1555.98136"	"1555.98235"	"-0.64"	"-0.00033"	"13/88"	"13"	"88"	"3805860.97595215"	"HCD"	"MS2"	"50.41749"	"108.7"	"100.000"	"54.6834"	"16785"	"16785"	"16757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.4"	""	"147.0"	""	"162.1"	""	"170.1"	"2.8"	"199.6"	"200.4"	""	"227"	"36"	"30.000"	"23.000"	"0.00291068938144761"	"22"	"0.0001889"	"0.0008763"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGTPGAELLK"	"[R].lVGTPGAELLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"519.33209"	"1555.98172"	"1555.98235"	"-0.40"	"-0.00021"	"8/88"	"8"	"88"	"3358772.27520752"	"HCD"	"MS2"	"60.68674"	"102.4"	"100.000"	"54.4562"	"16639"	"16639"	"16609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.5"	""	"142.0"	""	"154.6"	""	"172.7"	"1.8"	"178.1"	"178.8"	""	"227"	"31"	"30.000"	"23.000"	"0.00874975437388128"	"21"	"0.0001889"	"0.000434"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLFTDFDK"	"[R].vNLFTDFDk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"778.93915"	"1556.87102"	"1556.87247"	"-0.93"	"-0.00072"	"16/84"	"16"	"84"	"2243830.77294922"	"HCD"	"MS2"	"16.90242"	"203.5"	"100.000"	"64.1582"	"20651"	"20651"	"20627"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.9"	""	"238.7"	""	"263.2"	""	"331.7"	"5.6"	"408.5"	"442.1"	""	"821"	"54"	"36.000"	"29.000"	"0.000182941889967175"	"23"	"0"	"9.978E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLFTDFDK"	"[R].vNLFTDFDk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"519.62891"	"1556.87217"	"1556.87247"	"-0.19"	"-0.00010"	"9/84"	"9"	"84"	"4137640.28344727"	"HCD"	"MS2"	"37.96292"	"134.0"	"100.000"	"64.1945"	"20613"	"20613"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.3"	""	"167.4"	""	"168.8"	""	"226.1"	""	"260.1"	"262.0"	""	"819"	"24"	"36.000"	"29.000"	"0.154260205683911"	"14"	"0.0003839"	"0.00159"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLFTDFDK"	"[R].vNLFTDFDk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"778.93976"	"1556.87224"	"1556.87247"	"-0.14"	"-0.00011"	"16/84"	"16"	"84"	"3041254.36254883"	"HCD"	"MS2"	"9.026158"	"266.9"	"100.000"	"64.1736"	"20604"	"20604"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"341.0"	""	"307.6"	""	"335.8"	""	"399.6"	"4.1"	"582.0"	"566.0"	""	"819"	"52"	"36.000"	"29.000"	"0.000280707428732365"	"24"	"0"	"9.202E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVITNEYMK"	"[R].tVITNEYMk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.2449"	"0.0000"	"1"	"1"	"1"	"778.94037"	"1556.87346"	"1556.87584"	"-1.53"	"-0.00119"	"8/82"	"8"	"82"	"684072.616333008"	"HCD"	"MS2"	"0"	"67.9"	"100.000"	"40.0994"	"10860"	"10860"	"10829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.8"	""	"80.1"	""	"94.0"	""	"116.2"	""	"138.1"	"128.0"	""	"783"	"49"	"35.000"	"28.000"	"0.000465298622041592"	""	"0"	"4.788E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVITNEYMK"	"[R].tVITNEYMk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.2745"	"0.0000"	"1"	"1"	"1"	"778.94183"	"1556.87639"	"1556.87584"	"0.36"	"0.00028"	"16/82"	"16"	"82"	"866683.675476074"	"HCD"	"MS2"	"0"	"89.5"	"100.000"	"40.0690"	"10803"	"10803"	"10773"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.9"	""	"124.1"	""	"110.9"	""	"132.8"	""	"176.1"	"181.1"	""	"825"	"51"	"36.000"	"29.000"	"0.000328415732047144"	""	"0"	"5.498E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANVELYYK"	"[K].vANVELYYk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"778.95459"	"1556.90190"	"1556.90885"	"-4.46"	"-0.00347"	"8/76"	"8"	"76"	"3695581.38116455"	"HCD"	"MS2"	"0"	"300.9"	"100.000"	"48.1945"	"14157"	"14157"	"14130"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"404.5"	""	"370.8"	""	"379.8"	""	"519.8"	"0.4"	"580.3"	"598.3"	""	"780"	"47"	"35.000"	"28.000"	"0.000822364978473982"	"23"	"0"	"0.0001566"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANVELYYK"	"[K].vANVELYYk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"778.95685"	"1556.90642"	"1556.90885"	"-1.56"	"-0.00122"	"8/76"	"8"	"76"	"4133247.89593506"	"HCD"	"MS2"	"14.77123"	"344.1"	"100.000"	"47.9242"	"13998"	"13998"	"13976"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"440.4"	""	"450.6"	""	"446.4"	""	"594.8"	""	"673.1"	"659.9"	""	"757"	"48"	"35.000"	"28.000"	"0.000555988596088204"	"24"	"0"	"0.0001658"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANVELYYK"	"[K].vANVELYYk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"778.95709"	"1556.90691"	"1556.90885"	"-1.25"	"-0.00097"	"8/76"	"8"	"76"	"1520223.5748291"	"HCD"	"MS2"	"0"	"137.1"	"100.000"	"48.2246"	"14121"	"14121"	"14096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.2"	""	"160.1"	""	"184.1"	""	"214.0"	"1.0"	"274.0"	"280.9"	""	"747"	"48"	"35.000"	"28.000"	"0.000558844017551271"	"23"	"0"	"6.408E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANVELYYK"	"[K].vANVELYYk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"778.95795"	"1556.90862"	"1556.90885"	"-0.15"	"-0.00012"	"8/76"	"8"	"76"	"2156391.12335205"	"HCD"	"MS2"	"8.701883"	"191.6"	"100.000"	"48.4925"	"14278"	"14278"	"14255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.9"	""	"238.0"	""	"228.9"	""	"312.1"	"2.9"	"383.0"	"411.5"	""	"727"	"46"	"35.000"	"28.000"	"0.00101742970968709"	"20"	"0"	"0.0001376"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGIPDLQQTK"	"[R].vGIPDLQQTk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"778.97479"	"1556.94231"	"1556.94121"	"0.70"	"0.00055"	"8/86"	"8"	"86"	"624446.378417969"	"HCD"	"MS2"	"46.68056"	"61.8"	"100.000"	"45.0992"	"12847"	"12847"	"12816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.6"	""	"80.5"	""	"86.7"	""	"98.7"	"1.7"	"115.2"	"119.4"	""	"498"	"38"	"33.000"	"26.000"	"0.00384768355445065"	"22"	"0.0001889"	"0.0008249"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPVFQPGVK"	"[K].nLPVFQPGVk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"519.65698"	"1556.95639"	"1556.95647"	"-0.05"	"-0.00003"	"11/92"	"11"	"92"	"4303253.30395508"	"HCD"	"MS2"	"24.01413"	"128.7"	"100.000"	"49.2914"	"14558"	"14558"	"14527"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.7"	""	"180.4"	""	"186.0"	""	"221.1"	"1.5"	"237.6"	"220.2"	""	"382"	"29"	"32.000"	"25.000"	"0.0266706356961684"	"22"	"0.0004166"	"0.002112"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIQSLSPVK"	"[K].lNIQSLSPVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.8036"	"0.0000"	"1"	"1"	"1"	"519.66309"	"1556.97470"	"1556.97760"	"-1.86"	"-0.00096"	"12/92"	"12"	"92"	"4005404.96307373"	"HCD"	"MS2"	"41.53276"	"105.0"	"100.000"	"53.7134"	"16395"	"16395"	"16383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.2"	""	"123.7"	""	"109.3"	""	"203.4"	""	"215.0"	"232.9"	""	"268"	"56"	"31.000"	"24.000"	"3.36592781822284E-05"	""	"0"	"5.454E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKQVIQGLEALK"	"[K].TKQVIQGLEALk.[N]"	"K12(TMT6plex)"	"1"	"1"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"1"	"3"	"3"	"0.2029"	"0.0000"	"1"	"1"	"1"	"519.66321"	"1556.97507"	"1556.95731"	"11.41"	"0.00592"	"9/124"	"9"	"124"	"1472395.73986816"	"HCD"	"MS2"	"24.22827"	"51.0"	"100.000"	"56.0433"	"17288"	"17288"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.0"	""	"64.6"	""	"73.4"	""	"79.9"	"0.9"	"96.2"	"101.8"	""	"265"	"69"	"31.000"	"24.000"	"1.66423970189571E-06"	""	"0.0003571"	"0.001491"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIQSLSPVK"	"[K].lNIQSLSPVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"519.66333"	"1556.97544"	"1556.97760"	"-1.39"	"-0.00072"	"12/92"	"12"	"92"	"3310755.66387939"	"HCD"	"MS2"	"41.32256"	"97.6"	"100.000"	"53.5898"	"16290"	"16290"	"16275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.3"	""	"104.0"	""	"116.0"	""	"196.6"	"1.5"	"205.6"	"198.2"	""	"265"	"56"	"31.000"	"24.000"	"3.42149475259084E-05"	""	"0"	"9.59E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIQSLSPVK"	"[K].lNIQSLSPVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.99146"	"1556.97563"	"1556.97760"	"-1.26"	"-0.00098"	"6/92"	"6"	"92"	"1322404.16217041"	"HCD"	"MS2"	"100"	"111.6"	"100.000"	"53.3354"	"16193"	"16193"	"16178"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.4"	""	"133.8"	""	"150.0"	""	"199.7"	""	"217.3"	"219.5"	""	"264"	"21"	"31.000"	"24.000"	"0.0980785262023647"	"14"	"0.0001859"	"0.0003548"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKQVIQGLEALK"	"[K].TKQVIQGLEALk.[N]"	"K12(TMT6plex)"	"1"	"1"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"1"	"3"	"3"	"0.2097"	"0.0000"	"1"	"1"	"1"	"519.66370"	"1556.97654"	"1556.95731"	"12.35"	"0.00641"	"9/124"	"9"	"124"	"2017519.54248047"	"HCD"	"MS2"	"20.11605"	"65.3"	"100.000"	"56.2145"	"17412"	"17412"	"17381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.9"	""	"89.2"	""	"80.7"	""	"116.4"	"1.1"	"130.3"	"121.1"	""	"262"	"63"	"31.000"	"24.000"	"7.36667135999358E-06"	"23"	"0.000523"	"0.003111"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIQSLSPVK"	"[K].lNIQSLSPVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"778.99200"	"1556.97673"	"1556.97760"	"-0.56"	"-0.00043"	"6/92"	"6"	"92"	"1808698.28631592"	"HCD"	"MS2"	"0"	"136.4"	"100.000"	"53.5646"	"16338"	"16338"	"16326"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.4"	""	"181.8"	""	"174.4"	""	"248.6"	""	"237.9"	"255.8"	""	"262"	"31"	"31.000"	"24.000"	"0.00957792199363278"	"20"	"0.0001308"	"0.0002612"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAIAPPIIK"	"[K].yLAIAPPIIk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"519.67712"	"1557.01682"	"1557.01801"	"-0.76"	"-0.00040"	"10/74"	"10"	"74"	"5556856.496521"	"HCD"	"MS2"	"21.96399"	"131.2"	"100.000"	"65.7178"	"21235"	"21235"	"21209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.8"	""	"180.6"	""	"210.2"	""	"216.0"	"0.3"	"232.7"	"208.0"	""	"154"	"24"	"28.000"	"21.000"	"0.0278927108780858"	"14"	"0.0001889"	"0.000737"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAIAPPIIK"	"[K].yLAIAPPIIk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.01215"	"1557.01702"	"1557.01801"	"-0.64"	"-0.00050"	"7/74"	"7"	"74"	"1782866.19873047"	"HCD"	"MS2"	"30.37803"	"114.9"	"100.000"	"65.8682"	"21349"	"21349"	"21331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.5"	""	"161.2"	""	"183.0"	""	"166.7"	"2.1"	"199.1"	"206.3"	""	"154"	"34"	"28.000"	"21.000"	"0.00329223422336722"	"15"	"0.0002277"	"0.001241"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAIAPPIIK"	"[K].yLAIAPPIIk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.01233"	"1557.01738"	"1557.01801"	"-0.40"	"-0.00031"	"9/74"	"9"	"74"	"1742649.72149658"	"HCD"	"MS2"	"36.59523"	"110.6"	"100.000"	"65.9339"	"21323"	"21323"	"21305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.9"	""	"148.1"	""	"173.5"	""	"171.2"	"2.2"	"189.9"	"212.9"	""	"154"	"35"	"28.000"	"21.000"	"0.00246882737986921"	"15"	"0.0001889"	"0.0003893"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAIAPPIIK"	"[K].yLAIAPPIIk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"519.67737"	"1557.01755"	"1557.01801"	"-0.29"	"-0.00015"	"10/74"	"10"	"74"	"6242209.12518311"	"HCD"	"MS2"	"28.05307"	"143.8"	"100.000"	"65.6635"	"21266"	"21266"	"21235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.1"	""	"202.5"	""	"221.1"	""	"227.4"	""	"265.7"	"231.1"	""	"154"	"24"	"28.000"	"21.000"	"0.028021457781795"	"14"	"0.0001889"	"0.000995"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEFAGYNVLR"	"[R].lFEFAGYNVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.43439"	"1557.86150"	"1557.86268"	"-0.76"	"-0.00059"	"8/86"	"8"	"86"	"1187982.54547119"	"HCD"	"MS2"	"13.21968"	"72.3"	"100.000"	"73.0995"	"24292"	"24292"	"24271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.1"	""	"109.6"	""	"105.2"	""	"126.5"	""	"118.5"	"140.8"	""	"884"	"24"	"36.000"	"29.000"	"0.193384770479947"	"14"	"0"	"0.0001726"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEFAGYNVLR"	"[R].lFEFAGYNVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.43457"	"1557.86186"	"1557.86268"	"-0.52"	"-0.00041"	"7/86"	"7"	"86"	"1386244.38720703"	"HCD"	"MS2"	"15.53304"	"85.7"	"100.000"	"73.1523"	"24262"	"24262"	"24241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.3"	""	"133.6"	""	"130.7"	""	"138.4"	""	"142.7"	"167.2"	""	"886"	"46"	"36.000"	"29.000"	"0.00118141838838302"	"16"	"0"	"7.381E-06"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEFAGYNVLR"	"[R].lFEFAGYNVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"779.43488"	"1557.86247"	"1557.86268"	"-0.13"	"-0.00010"	"8/86"	"8"	"86"	"426025.083251953"	"HCD"	"MS2"	"15.50861"	"32.4"	"100.000"	"73.4132"	"24420"	"24420"	"24399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.3"	""	"43.5"	""	"51.7"	""	"51.6"	"0.2"	"57.1"	"63.7"	""	"886"	"44"	"36.000"	"29.000"	"0.00190284637056845"	"19"	"0"	"0.0001202"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEFAGYNVLR"	"[R].lFEFAGYNVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"779.43518"	"1557.86308"	"1557.86268"	"0.26"	"0.00020"	"8/86"	"8"	"86"	"286796.098510742"	"HCD"	"MS2"	"24.93239"	"24.5"	"100.000"	"73.4752"	"24394"	"24394"	"24369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.2"	""	"32.4"	""	"29.3"	""	"49.2"	""	"48.5"	"43.3"	""	"891"	"34"	"36.000"	"29.000"	"0.0188732941375071"	"21"	"0.0001859"	"0.0003226"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWNVDLIPK"	"[R].dWNVDLIPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"519.97229"	"1557.90232"	"1557.90410"	"-1.14"	"-0.00059"	"6/84"	"6"	"84"	"6383914.13049316"	"HCD"	"MS2"	"9.423074"	"170.5"	"100.000"	"62.1670"	"19838"	"19838"	"19811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.1"	""	"202.4"	""	"207.4"	""	"297.2"	""	"364.5"	"347.9"	""	"699"	"26"	"35.000"	"28.000"	"0.0819307970954312"	"28"	"0.0001889"	"0.0006719"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWNVDLIPK"	"[R].dWNVDLIPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.6047"	"0.0000"	"1"	"1"	"1"	"519.97241"	"1557.90268"	"1557.90410"	"-0.91"	"-0.00047"	"6/84"	"6"	"84"	"9405095.53729248"	"HCD"	"MS2"	"9.317491"	"245.1"	"100.000"	"62.0676"	"19744"	"19744"	"19721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"305.9"	""	"287.6"	""	"309.2"	""	"435.5"	"3.0"	"494.2"	"491.2"	""	"701"	"43"	"35.000"	"28.000"	"0.00190848179821269"	""	"0.0001308"	"0.0002518"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWNVDLIPK"	"[R].dWNVDLIPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"779.45514"	"1557.90300"	"1557.90410"	"-0.70"	"-0.00055"	"7/84"	"7"	"84"	"1674506.89361572"	"HCD"	"MS2"	"2.654397"	"127.1"	"100.000"	"62.5454"	"19992"	"19992"	"19971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.9"	""	"145.1"	""	"163.6"	""	"206.1"	"0.9"	"263.3"	"268.3"	""	"705"	"54"	"35.000"	"28.000"	"0.000128872164043627"	"28"	"0"	"0.0001068"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWNVDLIPK"	"[R].dWNVDLIPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"779.45514"	"1557.90300"	"1557.90410"	"-0.70"	"-0.00055"	"7/84"	"7"	"84"	"4902783.59649658"	"HCD"	"MS2"	"0"	"313.2"	"100.000"	"62.0562"	"19739"	"19739"	"19721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.6"	""	"375.0"	""	"389.4"	""	"577.7"	"2.3"	"605.1"	"620.3"	""	"705"	"55"	"35.000"	"28.000"	"0.000111727253072283"	""	"7.476E-05"	"0.0002033"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWNVDLIPK"	"[R].dWNVDLIPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.5778"	"0.0000"	"1"	"1"	"1"	"519.97266"	"1557.90342"	"1557.90410"	"-0.44"	"-0.00023"	"6/84"	"6"	"84"	"7221187.18536377"	"HCD"	"MS2"	"9.895498"	"188.7"	"100.000"	"62.4554"	"19956"	"19956"	"19939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"238.9"	""	"213.1"	""	"235.0"	""	"312.1"	""	"393.5"	"400.6"	""	"704"	"45"	"35.000"	"28.000"	"0.00100819064540712"	""	"0.0001308"	"0.0002784"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWNVDLIPK"	"[R].dWNVDLIPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8209"	"0.0000"	"1"	"1"	"1"	"779.45563"	"1557.90398"	"1557.90410"	"-0.08"	"-0.00006"	"8/84"	"8"	"84"	"6941020.29736328"	"HCD"	"MS2"	"0"	"414.9"	"100.000"	"62.2245"	"19861"	"19861"	"19843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"504.4"	""	"509.3"	""	"511.8"	""	"730.6"	"2.4"	"841.8"	"838.3"	""	"717"	"67"	"35.000"	"28.000"	"7.07113550897176E-06"	""	"0"	"0.0001085"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWNVDLIPK"	"[R].dWNVDLIPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.5952"	"0.0000"	"1"	"1"	"1"	"519.97290"	"1557.90415"	"1557.90410"	"0.03"	"0.00002"	"6/84"	"6"	"84"	"4799588.29870605"	"HCD"	"MS2"	"10.48956"	"129.2"	"100.000"	"62.3742"	"19869"	"19869"	"19849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.7"	""	"140.6"	""	"177.2"	""	"216.1"	""	"274.6"	"268.6"	""	"717"	"42"	"35.000"	"28.000"	"0.00203464741038964"	""	"0.0001308"	"0.0002414"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWNVDLIPK"	"[R].dWNVDLIPk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"779.45630"	"1557.90532"	"1557.90410"	"0.78"	"0.00061"	"7/84"	"7"	"84"	"2606608.37280273"	"HCD"	"MS2"	"0"	"176.0"	"100.000"	"62.3715"	"19868"	"19868"	"19849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.5"	""	"192.6"	""	"221.5"	""	"291.7"	"2.0"	"356.6"	"391.8"	""	"728"	"52"	"35.000"	"28.000"	"0.000250669435869317"	"27"	"0"	"0.0001651"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYILWTK"	"[K].eFYILWTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"779.45673"	"1557.90618"	"1557.90812"	"-1.25"	"-0.00097"	"7/68"	"7"	"68"	"903930.395690918"	"HCD"	"MS2"	"0"	"76.6"	"100.000"	"72.7394"	"24094"	"24094"	"24065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.1"	""	"134.4"	""	"130.4"	""	"114.8"	""	"117.3"	"130.0"	""	"711"	"41"	"35.000"	"28.000"	"0.00269054094179956"	"24"	"0.0001308"	"0.0002852"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYILWTK"	"[K].eFYILWTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"779.45697"	"1557.90666"	"1557.90812"	"-0.94"	"-0.00073"	"9/68"	"9"	"68"	"624283.580932617"	"HCD"	"MS2"	"4.64204"	"57.7"	"100.000"	"73.0392"	"24216"	"24216"	"24193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.7"	""	"92.2"	"2.5"	"83.0"	""	"93.0"	""	"92.8"	"117.3"	""	"713"	"18"	"35.000"	"28.000"	"0.616679532060184"	"15"	"0.0003839"	"0.002003"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYILWTK"	"[K].eFYILWTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"779.45752"	"1557.90776"	"1557.90812"	"-0.23"	"-0.00018"	"14/68"	"14"	"68"	"819706.827331543"	"HCD"	"MS2"	"22.48339"	"76.3"	"100.000"	"72.6869"	"24124"	"24124"	"24095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.2"	""	"123.0"	""	"128.9"	""	"111.8"	"3.4"	"122.2"	"137.9"	""	"712"	"43"	"35.000"	"28.000"	"0.00170392312866859"	"26"	"0"	"0.0001297"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYILWTK"	"[K].eFYILWTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"779.45764"	"1557.90801"	"1557.90812"	"-0.07"	"-0.00006"	"6/68"	"6"	"68"	"622251.397521973"	"HCD"	"MS2"	"15.95731"	"58.7"	"100.000"	"72.9842"	"24245"	"24245"	"24223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.8"	""	"84.3"	""	"94.5"	""	"94.6"	""	"111.6"	"109.4"	""	"713"	"24"	"35.000"	"28.000"	"0.159242700601818"	"18"	"0.0001889"	"0.0007097"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMFHVNKPR"	"[K].aMFHVNkPR.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"390.23279"	"1557.90932"	"1557.90881"	"0.33"	"0.00013"	"4/72"	"4"	"72"	"51713286.6884766"	"HCD"	"MS2"	"4.579416"	"278.9"	"14.485"	"30.4494"	"6875"	"6875"	"6858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"390.8"	""	"466.1"	""	"360.5"	""	"364.1"	"18.0"	"493.4"	"550.0"	""	"708"	"7"	"35.000"	"28.000"	"7.16148789252108"	"13"	"0.0008731"	"0.008538"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMFHVNKPR"	"[K].aMFHVNkPR.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"4"	"4"	"0.5556"	"0.0000"	"1"	"1"	"1"	"390.23282"	"1557.90944"	"1557.90881"	"0.41"	"0.00016"	"10/72"	"10"	"72"	"49947359.4438477"	"HCD"	"MS2"	"5.050379"	"365.9"	"20.758"	"30.5232"	"6946"	"6946"	"6933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"541.5"	""	"585.4"	""	"471.2"	""	"448.9"	"27.7"	"662.0"	"731.1"	""	"709"	"9"	"35.000"	"28.000"	"4.60910115412801"	"17"	"0.0006037"	"0.004243"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ACGLNFADLMGR"	"[R].acGLNFADLmGR.[Q]"	"N-Term(TMT6plex); C2(Methylthio); M10(Oxidation)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.87183"	"1558.73638"	"1558.73776"	"-0.89"	"-0.00069"	"10/102"	"10"	"102"	"1590361.52502441"	"HCD"	"MS2"	"33.15908"	"98.1"	"100.000"	"60.9221"	"19330"	"19330"	"19299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.3"	""	"109.3"	""	"118.9"	""	"193.0"	"0.4"	"201.8"	"183.9"	""	"414"	"31"	"33.000"	"26.000"	"0.0179048359186568"	"14"	"0.0004166"	"0.002115"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ACGLNFADLMGR"	"[R].acGLNFADLmGR.[Q]"	"N-Term(TMT6plex); C2(Methylthio); M10(Oxidation)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"779.87189"	"1558.73650"	"1558.73776"	"-0.81"	"-0.00063"	"11/102"	"11"	"102"	"1549257.23834229"	"HCD"	"MS2"	"29.96255"	"102.2"	"100.000"	"60.7725"	"19215"	"19215"	"19193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.4"	""	"114.3"	""	"133.7"	""	"194.5"	"0.5"	"227.2"	"182.2"	""	"410"	"35"	"33.000"	"26.000"	"0.0058177340083052"	"19"	"0.0003839"	"0.001779"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFAFVQYVNER"	"[K].gFAFVQYVNER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"779.91400"	"1558.82073"	"1558.82154"	"-0.52"	"-0.00041"	"8/90"	"8"	"90"	"1207799.81280518"	"HCD"	"MS2"	"0"	"90.2"	"100.000"	"55.1820"	"16989"	"16989"	"16965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.5"	""	"96.5"	""	"88.9"	""	"188.3"	""	"189.6"	"176.3"	""	"860"	"45"	"36.000"	"29.000"	"0.0013473128614557"	"18"	"0"	"1.288E-05"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFAFVQYVNER"	"[K].gFAFVQYVNER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"779.91406"	"1558.82085"	"1558.82154"	"-0.45"	"-0.00035"	"8/90"	"8"	"90"	"1152666.00616455"	"HCD"	"MS2"	"0"	"89.1"	"100.000"	"55.0012"	"16861"	"16861"	"16843"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.0"	""	"93.9"	""	"82.4"	""	"181.8"	"0.4"	"181.1"	"194.9"	""	"860"	"45"	"36.000"	"29.000"	"0.00144367174124471"	"21"	"0"	"2.574E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WALSQSNPSALR"	"[R].wALSQSNPSALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"779.92938"	"1558.85149"	"1558.85391"	"-1.55"	"-0.00121"	"11/112"	"11"	"112"	"4404687.67382813"	"HCD"	"MS2"	"0"	"201.7"	"100.000"	"42.4550"	"11821"	"11821"	"11795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.4"	""	"253.3"	""	"269.2"	""	"323.1"	""	"379.8"	"381.2"	""	"941"	"56"	"36.000"	"29.000"	"0.000121775417657953"	""	"0"	"5.278E-06"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WALSQSNPSALR"	"[R].wALSQSNPSALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"779.93024"	"1558.85320"	"1558.85391"	"-0.45"	"-0.00035"	"10/112"	"10"	"112"	"4185457.23840332"	"HCD"	"MS2"	"0"	"202.9"	"100.000"	"42.1912"	"11669"	"11669"	"11644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"294.1"	""	"269.4"	""	"287.1"	""	"320.4"	"3.9"	"379.5"	"368.3"	""	"930"	"50"	"36.000"	"29.000"	"0.000449213658730264"	""	"0"	"9.473E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEVVQSGGK"	"[K].aLLEVVQSGGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"520.32318"	"1558.95499"	"1558.95686"	"-1.20"	"-0.00062"	"13/96"	"13"	"96"	"3565878.71112061"	"HCD"	"MS2"	"10.46877"	"110.1"	"100.000"	"51.9693"	"15643"	"15643"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.2"	""	"153.6"	""	"151.0"	""	"173.9"	"3.1"	"202.4"	"209.1"	""	"618"	"38"	"34.000"	"27.000"	"0.00463402614170233"	"18"	"0.0001308"	"0.0002609"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEVVQSGGK"	"[K].aLLEVVQSGGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"520.32355"	"1558.95609"	"1558.95686"	"-0.50"	"-0.00026"	"12/96"	"12"	"96"	"5167698.69726563"	"HCD"	"MS2"	"14.67163"	"150.9"	"100.000"	"52.1212"	"15755"	"15755"	"15734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.9"	"3.2"	"201.4"	""	"204.1"	""	"248.3"	"7.5"	"298.7"	"299.4"	""	"609"	"43"	"34.000"	"27.000"	"0.00146415581602942"	"17"	"0"	"0.0001023"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEVVQSGGK"	"[K].aLLEVVQSGGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.8356"	"0.0000"	"1"	"1"	"1"	"779.98169"	"1558.95610"	"1558.95686"	"-0.49"	"-0.00038"	"18/96"	"18"	"96"	"3528746.10137939"	"HCD"	"MS2"	"30.19227"	"226.0"	"100.000"	"51.9717"	"15694"	"15694"	"15670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.1"	""	"285.7"	""	"291.9"	""	"372.8"	"2.2"	"451.8"	"475.0"	""	"609"	"73"	"34.000"	"27.000"	"1.62026964946739E-06"	""	"0"	"8.321E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEVVQSGGK"	"[K].aLLEVVQSGGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.8310"	"0.0000"	"1"	"1"	"1"	"779.98273"	"1558.95818"	"1558.95686"	"0.84"	"0.00066"	"18/96"	"18"	"96"	"3546799.98638916"	"HCD"	"MS2"	"32.13566"	"233.6"	"100.000"	"51.7761"	"15564"	"15564"	"15538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"286.4"	""	"289.9"	""	"305.2"	""	"381.6"	"3.1"	"476.4"	"475.4"	""	"573"	"71"	"34.000"	"27.000"	"2.2445259265252E-06"	""	"0"	"7.692E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIPVPMVGFK"	"[K].lIPVPMVGFk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70582"	"Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 SV=1"	"P70582"	"Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.99335"	"1558.97942"	"1558.97951"	"-0.06"	"-0.00005"	"8/74"	"8"	"74"	"584828.33404541"	"HCD"	"MS2"	"11.51217"	"40.3"	"100.000"	"75.8973"	"25434"	"25434"	"25407"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.9"	""	"44.6"	""	"53.2"	""	"42.6"	""	"72.7"	"116.4"	""	"387"	"27"	"32.000"	"25.000"	"0.0378164684692539"	"14"	"0.0001889"	"0.000592"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"3"	"3"	"0.2239"	"0.0000"	"1"	"1"	"1"	"520.33179"	"1558.98081"	"1558.96173"	"12.24"	"0.00636"	"8/126"	"8"	"126"	"6608073.39984131"	"HCD"	"MS2"	"6.884699"	"145.5"	"100.000"	"59.5703"	"18777"	"18777"	"18757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.5"	""	"215.0"	""	"205.7"	""	"213.7"	""	"264.9"	"288.1"	""	"397"	"67"	"32.000"	"25.000"	"4.09977960928391E-06"	""	"0.0006037"	"0.005821"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"3"	"3"	"0.1831"	"0.0000"	"1"	"1"	"1"	"520.33179"	"1558.98081"	"1558.96173"	"12.24"	"0.00636"	"9/126"	"9"	"126"	"18542762.2890015"	"HCD"	"MS2"	"12.1225"	"362.5"	"100.000"	"58.9478"	"18524"	"18524"	"18501"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"497.9"	""	"549.6"	""	"530.7"	""	"606.8"	""	"618.5"	"627.9"	""	"397"	"71"	"32.000"	"25.000"	"1.42482166817365E-06"	""	"0.000523"	"0.002846"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIPVPMVGFK"	"[K].lIPVPMVGFk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70582"	"Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 SV=1"	"P70582"	"Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"779.99414"	"1558.98100"	"1558.97951"	"0.96"	"0.00075"	"8/74"	"8"	"74"	"584434.903015137"	"HCD"	"MS2"	"0"	"39.8"	"100.000"	"75.9467"	"25402"	"25402"	"25377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.0"	""	"43.5"	""	"56.1"	""	"52.2"	""	"66.3"	"109.7"	""	"397"	"30"	"32.000"	"25.000"	"0.0185678026318289"	"16"	"0.0001889"	"0.0007239"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"2"	"2"	"0.1719"	"0.0000"	"1"	"1"	"1"	"779.99420"	"1558.98113"	"1558.96173"	"12.45"	"0.00970"	"15/126"	"15"	"126"	"2765433.54528809"	"HCD"	"MS2"	"22.11552"	"166.2"	"100.000"	"59.5724"	"18778"	"18778"	"18757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.1"	""	"227.4"	""	"255.7"	""	"267.6"	"0.4"	"283.7"	"325.8"	""	"397"	"64"	"32.000"	"25.000"	"8.48712329010899E-06"	""	"0.00103"	"0.01255"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"2"	"2"	"0.1515"	"0.0000"	"1"	"1"	"1"	"779.99432"	"1558.98137"	"1558.96173"	"12.60"	"0.00982"	"15/126"	"15"	"126"	"53933435.1152344"	"HCD"	"MS2"	"2.238305"	"404.5"	"14.210"	"59.1123"	"18538"	"18538"	"18521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"533.2"	""	"585.3"	""	"577.0"	""	"647.8"	"1.2"	"704.3"	"782.7"	""	"397"	"66"	"32.000"	"25.000"	"4.52647901292083E-06"	""	"0.00373"	"0.08675"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"2"	"2"	"0.1972"	"0.0000"	"1"	"1"	"1"	"779.99438"	"1558.98149"	"1558.96173"	"12.68"	"0.00988"	"9/126"	"9"	"126"	"57592287.7758789"	"HCD"	"MS2"	"2.230913"	"561.8"	"20.500"	"59.2469"	"18646"	"18646"	"18629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"738.3"	""	"786.5"	""	"862.7"	""	"897.2"	"2.1"	"951.1"	"1082.0"	""	"396"	"71"	"32.000"	"25.000"	"1.57639551382629E-06"	""	"0.003818"	"0.09454"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"779.99438"	"1558.98149"	"1558.96173"	"12.68"	"0.00988"	"15/126"	"15"	"126"	"8617189.39306641"	"HCD"	"MS2"	"46.11052"	"425.2"	"100.000"	"58.9455"	"18523"	"18523"	"18501"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"596.3"	""	"602.1"	""	"636.6"	""	"711.2"	""	"714.7"	"767.5"	""	"396"	"66"	"32.000"	"25.000"	"4.78261245220098E-06"	""	"0.001217"	"0.0184"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"3"	"3"	"0.2143"	"0.0000"	"1"	"1"	"1"	"520.33209"	"1558.98172"	"1558.96173"	"12.83"	"0.00667"	"8/126"	"8"	"126"	"5530900.05462646"	"HCD"	"MS2"	"12.24359"	"125.8"	"100.000"	"59.4388"	"18670"	"18670"	"18649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.1"	""	"172.2"	""	"193.9"	""	"184.3"	""	"232.8"	"248.2"	""	"394"	"70"	"32.000"	"25.000"	"2.02519210730916E-06"	""	"0.001966"	"0.02941"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"3"	"3"	"0.2031"	"0.0000"	"1"	"1"	"1"	"520.33209"	"1558.98172"	"1558.96173"	"12.83"	"0.00667"	"9/126"	"9"	"126"	"31314954.9176025"	"HCD"	"MS2"	"4.403033"	"605.3"	"92.902"	"58.8312"	"18427"	"18427"	"18409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"845.5"	""	"893.0"	""	"875.6"	""	"969.5"	"6.9"	"1065.4"	"1075.4"	""	"394"	"64"	"32.000"	"25.000"	"7.10339926752635E-06"	""	"0.0008731"	"0.009084"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"2"	"2"	"0.1724"	"0.0000"	"1"	"1"	"1"	"779.99469"	"1558.98210"	"1558.96173"	"13.07"	"0.01019"	"14/126"	"14"	"126"	"2478712.85137939"	"HCD"	"MS2"	"21.31364"	"150.7"	"100.000"	"59.4368"	"18669"	"18669"	"18649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.4"	""	"213.9"	""	"215.0"	""	"240.2"	""	"274.4"	"279.7"	""	"394"	"58"	"32.000"	"25.000"	"3.03714989231064E-05"	""	"0.002953"	"0.0521"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"2"	"2"	"0.1515"	"0.0000"	"1"	"1"	"1"	"779.99518"	"1558.98308"	"1558.96173"	"13.70"	"0.01068"	"15/126"	"15"	"126"	"9039405.08654785"	"HCD"	"MS2"	"35.69881"	"434.9"	"100.000"	"58.7991"	"18414"	"18414"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"597.0"	""	"649.3"	""	"607.1"	""	"768.8"	""	"734.7"	"762.3"	""	"405"	"66"	"33.000"	"26.000"	"4.79098738740865E-06"	""	"0.003415"	"0.07659"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"3"	"3"	"0.2027"	"0.0000"	"1"	"1"	"1"	"520.33295"	"1558.98429"	"1558.96173"	"14.47"	"0.00752"	"9/126"	"9"	"126"	"154896474.527344"	"HCD"	"MS2"	"4.101902"	"178.1"	"5.924"	"59.2513"	"18647"	"18647"	"18629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.7"	""	"263.4"	""	"262.0"	""	"266.7"	"1.9"	"326.1"	"322.4"	""	"397"	"74"	"32.000"	"25.000"	"8.46760344821161E-07"	""	"0.002829"	"0.04605"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].TKDVLTITLTPk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"3"	"3"	"0.2162"	"0.0000"	"1"	"1"	"1"	"520.33295"	"1558.98429"	"1558.96173"	"14.47"	"0.00752"	"8/126"	"8"	"126"	"139788924.933594"	"HCD"	"MS2"	"4.12905"	"202.5"	"7.120"	"59.1168"	"18539"	"18539"	"18521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.3"	""	"270.3"	""	"309.5"	""	"314.2"	"3.0"	"355.2"	"400.5"	""	"397"	"74"	"32.000"	"25.000"	"8.23683774629213E-07"	""	"0.003415"	"0.07721"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWMDWAAHK"	"[K].gWMDWAAHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"520.61072"	"1559.81760"	"1559.81932"	"-1.11"	"-0.00057"	"5/64"	"5"	"64"	"7719589.14233398"	"HCD"	"MS2"	"7.087736"	"237.3"	"100.000"	"48.3916"	"14237"	"14237"	"14211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"367.5"	""	"350.9"	""	"363.0"	""	"249.1"	""	"410.9"	"509.4"	""	"851"	"36"	"36.000"	"29.000"	"0.0104207640940494"	"22"	"0.0001308"	"0.0002153"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGIPIMR"	"[K].fLVGPDGIPImR.[W]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"520.63129"	"1559.87931"	"1559.88170"	"-1.54"	"-0.00080"	"5/88"	"5"	"88"	"2292482.21343994"	"HCD"	"MS2"	"20.56734"	"35.3"	"100.000"	"58.7945"	"18462"	"18462"	"18437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.6"	""	"40.5"	""	"53.9"	""	"71.6"	"0.1"	"66.6"	"60.0"	""	"871"	"35"	"36.000"	"29.000"	"0.0123307121417063"	"22"	"0.0001889"	"0.000637"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGIPIMR"	"[K].fLVGPDGIPImR.[W]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"780.44366"	"1559.88005"	"1559.88170"	"-1.06"	"-0.00082"	"9/88"	"9"	"88"	"2403703.52502441"	"HCD"	"MS2"	"0"	"86.9"	"100.000"	"58.7833"	"18457"	"18457"	"18437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.4"	""	"112.3"	""	"107.5"	""	"217.4"	"0.7"	"135.8"	"152.0"	""	"896"	"38"	"36.000"	"29.000"	"0.00676515909065538"	"27"	"0.001217"	"0.01706"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVGPDGIPIMR"	"[K].fLVGPDGIPImR.[W]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"780.44403"	"1559.88078"	"1559.88170"	"-0.59"	"-0.00046"	"7/88"	"7"	"88"	"1963732.62487793"	"HCD"	"MS2"	"0"	"77.3"	"100.000"	"58.5690"	"18320"	"18320"	"18297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.9"	""	"90.7"	""	"94.3"	""	"185.6"	"1.8"	"123.2"	"144.5"	""	"868"	"36"	"36.000"	"29.000"	"0.0107767976769828"	"27"	"0.002651"	"0.03969"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPDLYGSLLPLS"	"[R].rPDLYGSLLPLS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"780.45264"	"1559.89800"	"1559.89946"	"-0.94"	"-0.00073"	"8/106"	"8"	"106"	"3889186.84246826"	"HCD"	"MS2"	"20.66232"	"50.0"	"100.000"	"63.5521"	"20404"	"20404"	"20387"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.3"	""	"67.1"	""	"75.4"	""	"75.5"	""	"94.4"	"95.4"	""	"899"	"33"	"36.000"	"29.000"	"0.0213663184061291"	"19"	"0.0006037"	"0.005093"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPDLYGSLLPLS"	"[R].rPDLYGSLLPLS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"780.45319"	"1559.89910"	"1559.89946"	"-0.23"	"-0.00018"	"9/106"	"9"	"106"	"4086484.82855225"	"HCD"	"MS2"	"15.56248"	"47.5"	"100.000"	"63.5103"	"20333"	"20333"	"20313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.4"	""	"67.9"	""	"78.3"	""	"70.4"	"0.3"	"78.0"	"89.6"	""	"902"	"45"	"36.000"	"29.000"	"0.00146952352151906"	"17"	"0.0003839"	"0.001672"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGLYVIDSIVR"	"[K].vPGLYVIDSIVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63623"	"Protein SCAF8 OS=Rattus norvegicus OX=10116 GN=Scaf8 PE=1 SV=1"	"Q63623"	"Protein SCAF8 OS=Rattus norvegicus OX=10116 GN=Scaf8 PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"780.47040"	"1559.93352"	"1559.93584"	"-1.49"	"-0.00116"	"8/90"	"8"	"90"	"542412.916931152"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"76.9185"	"25839"	"25839"	"25815"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.5"	""	"25.8"	""	"30.0"	""	"26.4"	""	"38.8"	"40.1"	""	"836"	"29"	"36.000"	"29.000"	"0.0578330746410204"	"16"	"0.0003839"	"0.001602"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGLYVIDSIVR"	"[K].vPGLYVIDSIVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63623"	"Protein SCAF8 OS=Rattus norvegicus OX=10116 GN=Scaf8 PE=1 SV=1"	"Q63623"	"Protein SCAF8 OS=Rattus norvegicus OX=10116 GN=Scaf8 PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"780.47137"	"1559.93547"	"1559.93584"	"-0.24"	"-0.00019"	"10/90"	"10"	"90"	"519584.483520508"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"76.9106"	"25785"	"25785"	"25761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.3"	""	"20.2"	""	"25.3"	""	"37.3"	""	"31.8"	"41.1"	""	"826"	"47"	"36.000"	"29.000"	"0.000924591830228724"	"22"	"0.0001308"	"0.0002186"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLVGLGTWK"	"[K].mPLVGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.47412"	"1559.94097"	"1559.93838"	"1.66"	"0.00129"	"8/72"	"8"	"72"	"1142373.74053955"	"HCD"	"MS2"	"34.85151"	"74.4"	"100.000"	"67.5175"	"21963"	"21963"	"21945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.2"	""	"119.6"	""	"102.9"	""	"109.2"	"2.2"	"123.7"	"137.0"	""	"785"	"18"	"35.000"	"28.000"	"0.683659197806209"	"14"	"0.0001889"	"0.0009033"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKPEYHK"	"[R].akPEYHk.[F]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"390.74280"	"1559.94936"	"1559.95127"	"-1.23"	"-0.00048"	"5/58"	"5"	"58"	"5394655.87805176"	"HCD"	"MS2"	"26.13105"	"377.7"	"100.000"	"25.1076"	"4743"	"4743"	"4720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"571.6"	""	"469.4"	""	"470.9"	""	"647.6"	"4.0"	"709.3"	"706.4"	""	"696"	"2"	"35.000"	"28.000"	"22.3140932651636"	"13"	"0.0007076"	"0.00709"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMLGLDAAGK"	"[R].iLMLGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"3"	"3"	"0.7091"	"0.0000"	"1"	"1"	"1"	"520.65735"	"1559.95749"	"1559.95951"	"-1.29"	"-0.00067"	"7/80"	"7"	"80"	"3669905.56634521"	"HCD"	"MS2"	"4.108072"	"94.5"	"100.000"	"70.2265"	"23119"	"23119"	"23098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.8"	""	"154.1"	""	"150.1"	""	"144.0"	"2.8"	"170.3"	"159.0"	""	"656"	"55"	"35.000"	"28.000"	"0.000115311824493282"	""	"0"	"2.507E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMLGLDAAGK"	"[R].iLMLGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"2"	"2"	"0.5968"	"0.0000"	"1"	"1"	"1"	"780.48248"	"1559.95769"	"1559.95951"	"-1.16"	"-0.00091"	"10/80"	"10"	"80"	"3145912.50598145"	"HCD"	"MS2"	"26.28196"	"178.8"	"100.000"	"70.2609"	"23133"	"23133"	"23114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"233.1"	""	"264.8"	""	"280.0"	""	"281.4"	""	"317.4"	"316.5"	""	"656"	"62"	"35.000"	"28.000"	"2.03645043227461E-05"	""	"0"	"1.733E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMLGLDAAGK"	"[R].iLMLGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"780.48352"	"1559.95976"	"1559.95951"	"0.17"	"0.00013"	"17/80"	"17"	"80"	"2362583.5760498"	"HCD"	"MS2"	"48.62806"	"118.7"	"100.000"	"70.2924"	"23094"	"23094"	"23075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.6"	""	"182.3"	""	"195.2"	""	"179.4"	""	"206.2"	"211.4"	""	"594"	"45"	"34.000"	"27.000"	"0.00104654148699619"	""	"0"	"2.357E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMLGLDAAGK"	"[R].iLMLGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"520.65814"	"1559.95987"	"1559.95951"	"0.24"	"0.00012"	"7/80"	"7"	"80"	"3120128.80413818"	"HCD"	"MS2"	"7.778209"	"79.9"	"100.000"	"70.3041"	"23099"	"23099"	"23075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.3"	""	"129.8"	""	"125.5"	""	"123.2"	""	"141.0"	"139.2"	""	"596"	"48"	"34.000"	"27.000"	"0.000431734012356339"	""	"0"	"3.215E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMLGLDAAGK"	"[R].iLMLGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"780.48370"	"1559.96013"	"1559.95951"	"0.40"	"0.00031"	"14/80"	"14"	"80"	"496296.825927734"	"HCD"	"MS2"	"32.22006"	"35.5"	"100.000"	"70.5934"	"23269"	"23269"	"23242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.5"	""	"53.2"	""	"47.7"	""	"55.1"	"0.6"	"64.3"	"61.1"	""	"596"	"42"	"34.000"	"27.000"	"0.00177916515401983"	""	"0.0001859"	"0.0003303"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMLGLDAAGK"	"[R].iLMLGLDAAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"2"	"2"	"0.6094"	"0.0000"	"1"	"1"	"1"	"780.48383"	"1559.96037"	"1559.95951"	"0.56"	"0.00043"	"10/80"	"10"	"80"	"786366.999755859"	"HCD"	"MS2"	"15.54723"	"55.3"	"100.000"	"70.6091"	"23223"	"23223"	"23203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.4"	""	"88.3"	""	"87.4"	""	"67.9"	""	"102.8"	"103.8"	""	"596"	"64"	"34.000"	"27.000"	"1.21399322785626E-05"	""	"0"	"1.022E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGSDPQKK"	"[K].lGSDPQkk.[T]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"520.66187"	"1559.97104"	"1559.97240"	"-0.87"	"-0.00045"	"7/62"	"7"	"62"	"7833801.35284424"	"HCD"	"MS2"	"21.22094"	"519.0"	"100.000"	"27.9070"	"5878"	"5878"	"5852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"992.7"	""	"833.8"	""	"772.1"	""	"724.5"	""	"804.6"	"776.2"	""	"516"	"5"	"34.000"	"27.000"	"7.80943664450137"	"13"	"0.001389"	"0.0193"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEYQPFAGK"	"[K].yEYQPFAGk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"780.92560"	"1560.84392"	"1560.84625"	"-1.49"	"-0.00117"	"6/74"	"6"	"74"	"2377407.75628662"	"HCD"	"MS2"	"0"	"201.8"	"100.000"	"42.7741"	"11952"	"11952"	"11923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"395.3"	""	"295.1"	""	"298.8"	""	"278.1"	"1.4"	"314.9"	"322.2"	""	"967"	"42"	"36.000"	"29.000"	"0.00318710578350629"	"18"	"0"	"0.0001008"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEYQPFAGK"	"[K].yEYQPFAGk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.92578"	"1560.84429"	"1560.84625"	"-1.26"	"-0.00098"	"8/74"	"8"	"74"	"787141.343322754"	"HCD"	"MS2"	"0"	"86.1"	"100.000"	"42.5956"	"11835"	"11835"	"11804"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.2"	""	"111.4"	""	"129.9"	""	"122.2"	""	"141.0"	"162.5"	""	"959"	"27"	"36.000"	"29.000"	"0.10636251832942"	"14"	"0.0001889"	"0.0005253"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLNENAVEK"	"[K].wLNENAVEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"780.94281"	"1560.87834"	"1560.87861"	"-0.17"	"-0.00013"	"8/84"	"8"	"84"	"755611.58416748"	"HCD"	"MS2"	"0"	"77.6"	"100.000"	"43.3048"	"12116"	"12116"	"12085"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.6"	""	"91.9"	""	"106.8"	""	"123.1"	""	"130.5"	"133.0"	""	"971"	"50"	"36.000"	"29.000"	"0.000536030169962456"	"28"	"0"	"2.448E-05"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIGVSNFNHK"	"[K].sIGVSNFNHk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"780.94751"	"1560.88774"	"1560.88985"	"-1.35"	"-0.00105"	"10/88"	"10"	"88"	"321353.53137207"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"32.9912"	"7957"	"7957"	"7926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.4"	""	"42.2"	""	"43.0"	""	"46.6"	"1.8"	"51.6"	"58.4"	""	"1032"	"18"	"37.000"	"30.000"	"0.852412287886171"	"23"	"0.0001859"	"0.0003597"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIGVSNFNHK"	"[K].sIGVSNFNHk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"780.94879"	"1560.89031"	"1560.88985"	"0.29"	"0.00023"	"8/88"	"8"	"88"	"356096.622924805"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"32.8957"	"7875"	"7875"	"7848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.6"	""	"52.1"	""	"50.1"	""	"48.0"	""	"59.4"	"68.6"	""	"1016"	"49"	"37.000"	"30.000"	"0.00070447196106692"	"19"	"0"	"3.446E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFTTFTVTK"	"[K].aSFTTFTVTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.9079"	"0.0000"	"1"	"1"	"1"	"780.95581"	"1560.90434"	"1560.90377"	"0.37"	"0.00029"	"18/86"	"18"	"86"	"5290896.94104004"	"HCD"	"MS2"	"13.77627"	"402.8"	"100.000"	"49.3448"	"14579"	"14579"	"14559"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.8"	""	"364.6"	""	"356.4"	""	"830.2"	""	"952.0"	"1096.1"	""	"932"	"76"	"36.000"	"29.000"	"1.07742219222183E-06"	"24"	"0"	"2.623E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSASSLFYK"	"[R].sLSASSLFYk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"780.95862"	"1560.90996"	"1560.90377"	"3.97"	"0.00310"	"9/82"	"9"	"82"	"1438685.89343262"	"HCD"	"MS2"	"0"	"128.4"	"100.000"	"54.6489"	"16771"	"16771"	"16741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.3"	""	"167.0"	""	"179.9"	""	"220.8"	"6.4"	"242.5"	"230.2"	""	"983"	"49"	"36.000"	"29.000"	"0.000555294692061681"	"21"	"0"	"7.783E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLLEPFDK"	"[R].lQLLEPFDk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"520.98401"	"1560.93747"	"1560.94015"	"-1.72"	"-0.00089"	"9/84"	"9"	"84"	"3127874.51989746"	"HCD"	"MS2"	"23.76255"	"76.6"	"100.000"	"68.2798"	"22273"	"22273"	"22250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.2"	""	"91.3"	""	"91.6"	""	"118.7"	""	"171.3"	"170.3"	""	"718"	"27"	"35.000"	"28.000"	"0.0764001917507794"	"24"	"0.0001889"	"0.001049"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILHTAWHPK"	"[K].iLHTAWHPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P36876"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1"	"P36876"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1"	"0"	"4"	"4"	"0.8182"	"0.0000"	"1"	"1"	"1"	"390.99030"	"1560.93935"	"1560.94149"	"-1.37"	"-0.00053"	"5/64"	"5"	"64"	"8846714.13922119"	"HCD"	"MS2"	"21.04418"	"303.0"	"100.000"	"32.7765"	"7826"	"7826"	"7800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"388.4"	""	"412.9"	""	"446.1"	""	"496.4"	"6.3"	"549.9"	"571.4"	""	"710"	"22"	"35.000"	"28.000"	"0.238906712980933"	"18"	"0.0001889"	"0.00105"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILHTAWHPK"	"[K].iLHTAWHPk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P36876"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1"	"P36876"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1"	"0"	"4"	"4"	"0.8235"	"0.0000"	"1"	"1"	"1"	"390.99036"	"1560.93960"	"1560.94149"	"-1.21"	"-0.00047"	"5/64"	"5"	"64"	"8535198.06414795"	"HCD"	"MS2"	"17.82387"	"266.5"	"90.955"	"32.8629"	"7904"	"7904"	"7878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"358.8"	""	"349.6"	""	"388.5"	""	"453.3"	"6.1"	"471.0"	"497.1"	""	"710"	"17"	"35.000"	"28.000"	"0.687429797201046"	"17"	"0.0006037"	"0.004013"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISVEDLWK"	"[K].lISVEDLWk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"780.97351"	"1560.93974"	"1560.94015"	"-0.26"	"-0.00020"	"8/70"	"8"	"70"	"856521.166381836"	"HCD"	"MS2"	"12.56219"	"70.1"	"100.000"	"75.0252"	"25078"	"25078"	"25055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.3"	""	"89.6"	""	"90.6"	""	"129.8"	""	"143.2"	"142.1"	""	"707"	"31"	"35.000"	"28.000"	"0.0259053472464603"	"24"	"0"	"0.0001102"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISVEDLWK"	"[K].lISVEDLWk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"780.97357"	"1560.93987"	"1560.94015"	"-0.18"	"-0.00014"	"16/70"	"16"	"70"	"901450.508483887"	"HCD"	"MS2"	"18.64371"	"74.8"	"100.000"	"75.0348"	"25030"	"25030"	"25009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.7"	""	"85.1"	""	"86.7"	""	"131.5"	"0.9"	"151.3"	"172.0"	""	"707"	"52"	"35.000"	"28.000"	"0.00020959910223903"	""	"0"	"2.915E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLLEPFDK"	"[R].lQLLEPFDk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"780.97388"	"1560.94048"	"1560.94015"	"0.21"	"0.00016"	"8/84"	"8"	"84"	"4929085.0949707"	"HCD"	"MS2"	"17.3026"	"280.9"	"100.000"	"68.2206"	"22300"	"22300"	"22282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.5"	""	"286.3"	""	"340.2"	""	"445.2"	""	"650.5"	"605.5"	""	"705"	"38"	"35.000"	"28.000"	"0.0051423202674706"	""	"0"	"0.0001656"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLLEPFDK"	"[R].lQLLEPFDk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"780.97479"	"1560.94231"	"1560.94015"	"1.38"	"0.00108"	"8/84"	"8"	"84"	"4364798.01837158"	"HCD"	"MS2"	"29.23179"	"245.3"	"100.000"	"68.3123"	"22286"	"22286"	"22266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"300.3"	""	"275.4"	""	"305.5"	""	"376.2"	"1.0"	"547.9"	"525.6"	""	"676"	"36"	"35.000"	"28.000"	"0.00901398228608259"	""	"0.0001308"	"0.0002797"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGIMPGHIHK"	"[K].iGIMPGHIHk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"520.98608"	"1560.94370"	"1560.94486"	"-0.74"	"-0.00039"	"10/74"	"10"	"74"	"5797294.54412842"	"HCD"	"MS2"	"34.88954"	"342.2"	"100.000"	"34.4006"	"8480"	"8480"	"8451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"524.4"	""	"430.3"	""	"503.4"	""	"480.0"	"5.9"	"619.0"	"679.0"	""	"672"	"16"	"35.000"	"28.000"	"0.871644265671921"	"15"	"0.0001889"	"0.0003834"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGIMPGHIHK"	"[K].iGIMPGHIHk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"4"	"4"	"0.6786"	"0.0000"	"1"	"1"	"1"	"390.99152"	"1560.94423"	"1560.94486"	"-0.40"	"-0.00016"	"9/74"	"9"	"74"	"27819280.6427612"	"HCD"	"MS2"	"11.17258"	"683.8"	"100.000"	"34.3475"	"8501"	"8501"	"8477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1176.8"	""	"1015.7"	""	"968.0"	""	"854.9"	"12.5"	"1152.5"	"1289.9"	""	"673"	"28"	"35.000"	"28.000"	"0.0561028687023432"	"23"	"0.0004557"	"0.002555"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGIMPGHIHK"	"[K].iGIMPGHIHk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"4"	"4"	"0.6667"	"0.0000"	"1"	"1"	"1"	"390.99155"	"1560.94436"	"1560.94486"	"-0.32"	"-0.00013"	"10/74"	"10"	"74"	"27003411.3687744"	"HCD"	"MS2"	"5.952364"	"760.2"	"100.000"	"34.3065"	"8441"	"8441"	"8419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1296.5"	""	"1137.1"	""	"1107.7"	""	"962.6"	"16.4"	"1259.8"	"1411.2"	""	"672"	"30"	"35.000"	"28.000"	"0.0358376296733366"	"24"	"0.0001889"	"0.0008795"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNIWLAAVTK"	"[R].sNIWLAAVTk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"780.97778"	"1560.94829"	"1560.95138"	"-1.98"	"-0.00155"	"9/104"	"9"	"104"	"3470173.87249756"	"HCD"	"MS2"	"0"	"230.2"	"100.000"	"60.2070"	"19038"	"19038"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"301.1"	""	"282.5"	""	"289.4"	""	"403.8"	"4.5"	"442.4"	"459.9"	""	"626"	"66"	"34.000"	"27.000"	"8.52205509428386E-06"	""	"0"	"3.423E-05"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNIWLAAVTK"	"[R].sNIWLAAVTk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"780.98010"	"1560.95293"	"1560.95138"	"0.99"	"0.00077"	"9/104"	"9"	"104"	"4025761.2510376"	"HCD"	"MS2"	"2.732731"	"270.9"	"100.000"	"60.1038"	"18942"	"18942"	"18921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"364.5"	""	"325.5"	""	"334.8"	""	"451.3"	""	"524.3"	"570.7"	""	"600"	"70"	"34.000"	"27.000"	"2.79976290239098E-06"	""	"0"	"4.47E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKELENK"	"[R].ikELENk.[I]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.00171"	"1560.99057"	"1560.99280"	"-1.43"	"-0.00074"	"10/62"	"10"	"62"	"10790286.1627808"	"HCD"	"MS2"	"54.94169"	"656.7"	"100.000"	"34.4647"	"8506"	"8506"	"8483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"774.9"	""	"579.7"	""	"672.6"	""	"1161.8"	"4.7"	"1537.4"	"1520.5"	""	"322"	"1"	"32.000"	"25.000"	"13.8301176962369"	"13"	"0.0006037"	"0.006064"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFDRPLPVSR"	"[R].fVFDRPLPVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"521.30615"	"1561.90390"	"1561.90521"	"-0.84"	"-0.00044"	"8/104"	"8"	"104"	"29817852.5765381"	"HCD"	"MS2"	"21.05184"	"517.4"	"51.330"	"45.3516"	"12950"	"12950"	"12928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"683.7"	""	"725.0"	""	"717.8"	""	"839.0"	""	"931.7"	"1010.7"	""	"1029"	"9"	"37.000"	"30.000"	"6.03094515574512"	"20"	"0.0002277"	"0.001265"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFDRPLPVSR"	"[R].fVFDRPLPVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.30634"	"1561.90445"	"1561.90521"	"-0.49"	"-0.00025"	"9/104"	"9"	"104"	"20786215.0950928"	"HCD"	"MS2"	"25.76447"	"465.8"	"100.000"	"45.3013"	"12978"	"12978"	"12955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"674.4"	"4.8"	"643.4"	""	"680.1"	""	"740.3"	""	"848.0"	"820.5"	""	"1046"	"15"	"37.000"	"30.000"	"1.82180415763834"	"13"	"0"	"0.0001614"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFDRPLPVSR"	"[R].fVFDRPLPVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.30640"	"1561.90464"	"1561.90521"	"-0.37"	"-0.00019"	"5/104"	"5"	"104"	"18623540.6447144"	"HCD"	"MS2"	"36.33371"	"481.0"	"100.000"	"45.0509"	"12827"	"12827"	"12800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"721.3"	""	"652.8"	""	"702.2"	""	"787.6"	""	"825.2"	"864.7"	""	"1045"	"20"	"37.000"	"30.000"	"0.571592201377169"	"14"	"0.0001308"	"0.0002256"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"521.30951"	"1561.91397"	"1561.91764"	"-2.35"	"-0.00122"	"6/82"	"6"	"82"	"2065041.63781738"	"HCD"	"MS2"	"24.50869"	"58.9"	"100.000"	"64.5915"	"20828"	"20828"	"20803"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.7"	"1.9"	"81.0"	""	"88.4"	""	"82.9"	"1.7"	"103.2"	"124.2"	""	"921"	"29"	"36.000"	"29.000"	"0.0563935759761555"	"18"	"0.0001889"	"0.0005456"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"781.46161"	"1561.91594"	"1561.91764"	"-1.09"	"-0.00085"	"9/82"	"9"	"82"	"3406922.06677246"	"HCD"	"MS2"	"0"	"252.1"	"100.000"	"64.4926"	"20788"	"20788"	"20771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"380.5"	""	"362.6"	""	"404.7"	""	"324.5"	""	"396.3"	"522.2"	""	"882"	"42"	"36.000"	"29.000"	"0.00305097458175251"	"19"	"0"	"5.486E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"521.31042"	"1561.91672"	"1561.91764"	"-0.59"	"-0.00031"	"7/82"	"7"	"82"	"2787600.51190186"	"HCD"	"MS2"	"17.18362"	"84.7"	"100.000"	"64.5287"	"20749"	"20749"	"20729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.2"	""	"120.5"	""	"129.0"	""	"107.2"	"0.5"	"148.4"	"167.4"	""	"869"	"30"	"36.000"	"29.000"	"0.0409251029689174"	"18"	"0"	"0.0001052"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"521.31055"	"1561.91709"	"1561.91764"	"-0.35"	"-0.00018"	"8/82"	"8"	"82"	"8360065.45275879"	"HCD"	"MS2"	"4.447995"	"196.1"	"100.000"	"64.2641"	"20694"	"20694"	"20675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"311.5"	""	"301.9"	""	"293.9"	""	"259.8"	"0.1"	"320.0"	"368.1"	""	"869"	"52"	"36.000"	"29.000"	"0.000250605028343933"	"24"	"0"	"7.146E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.8730"	"0.0000"	"1"	"1"	"1"	"521.31073"	"1561.91764"	"1561.91764"	"0.00"	"0.00000"	"8/82"	"8"	"82"	"6433011.75048828"	"HCD"	"MS2"	"3.045023"	"161.9"	"100.000"	"64.2245"	"20625"	"20625"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.7"	""	"243.4"	""	"246.4"	""	"215.7"	""	"258.2"	"306.3"	""	"865"	"63"	"36.000"	"29.000"	"2.30667342298396E-05"	"24"	"0"	"3.492E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"781.46283"	"1561.91838"	"1561.91764"	"0.47"	"0.00037"	"9/82"	"9"	"82"	"3093343.87182617"	"HCD"	"MS2"	"0"	"242.2"	"100.000"	"64.4869"	"20732"	"20732"	"20713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.8"	""	"360.0"	""	"368.1"	""	"304.7"	""	"386.3"	"496.0"	""	"851"	"44"	"36.000"	"29.000"	"0.00156638878284897"	"22"	"0"	"4.573E-05"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"781.46289"	"1561.91850"	"1561.91764"	"0.55"	"0.00043"	"8/82"	"8"	"82"	"2440328.72406006"	"HCD"	"MS2"	"0"	"178.3"	"100.000"	"64.1974"	"20667"	"20667"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.7"	""	"262.8"	""	"267.1"	""	"239.3"	"0.5"	"269.1"	"340.8"	""	"849"	"49"	"36.000"	"29.000"	"0.000577933267706796"	"20"	"0"	"3E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"781.46301"	"1561.91875"	"1561.91764"	"0.71"	"0.00055"	"8/82"	"8"	"82"	"2700762.68426514"	"HCD"	"MS2"	"0"	"192.6"	"100.000"	"64.1853"	"20609"	"20609"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"318.4"	""	"302.5"	""	"281.8"	""	"246.0"	"2.1"	"310.7"	"360.3"	""	"859"	"47"	"36.000"	"29.000"	"0.00083745825559608"	"22"	"0"	"5.676E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"781.47180"	"1561.93633"	"1561.93877"	"-1.56"	"-0.00122"	"9/80"	"9"	"80"	"1010825.79730225"	"HCD"	"MS2"	"16.28947"	"80.6"	"100.000"	"55.8336"	"17202"	"17202"	"17179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.7"	""	"113.8"	""	"105.9"	""	"177.5"	""	"153.7"	"135.0"	""	"744"	"42"	"35.000"	"28.000"	"0.00254415132788692"	"16"	"0.0003839"	"0.001966"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"781.47247"	"1561.93767"	"1561.93877"	"-0.71"	"-0.00055"	"18/80"	"18"	"80"	"3712774.36779785"	"HCD"	"MS2"	"0"	"216.4"	"100.000"	"55.0933"	"16899"	"16899"	"16875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.4"	""	"237.3"	""	"275.2"	""	"591.4"	"0.5"	"399.2"	"331.4"	""	"729"	"52"	"35.000"	"28.000"	"0.000253920364393375"	"19"	"0"	"7.116E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.7347"	"0.0000"	"1"	"1"	"1"	"521.31750"	"1561.93796"	"1561.93877"	"-0.52"	"-0.00027"	"13/80"	"13"	"80"	"8497219.16802979"	"HCD"	"MS2"	"10.52563"	"207.1"	"100.000"	"55.3358"	"17052"	"17052"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"185.5"	""	"229.9"	""	"250.1"	""	"558.6"	"0.1"	"406.8"	"334.2"	""	"729"	"49"	"35.000"	"28.000"	"0.00042140291227902"	""	"0"	"2.222E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"781.47272"	"1561.93816"	"1561.93877"	"-0.39"	"-0.00031"	"18/80"	"18"	"80"	"3053377.71972656"	"HCD"	"MS2"	"15.45246"	"178.2"	"100.000"	"55.2622"	"17022"	"17022"	"16997"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.9"	""	"206.9"	""	"211.2"	""	"502.2"	"1.2"	"330.1"	"262.3"	""	"729"	"48"	"35.000"	"28.000"	"0.000576364910314055"	"17"	"0.0001308"	"0.0002128"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"781.47284"	"1561.93840"	"1561.93877"	"-0.24"	"-0.00018"	"18/80"	"18"	"80"	"2722386.74151611"	"HCD"	"MS2"	"0"	"169.6"	"100.000"	"55.9180"	"17290"	"17290"	"17269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.3"	""	"173.0"	""	"215.0"	""	"466.0"	"2.2"	"315.0"	"273.0"	""	"728"	"50"	"35.000"	"28.000"	"0.000345224320641527"	"19"	"0"	"2.751E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.8596"	"0.0000"	"1"	"1"	"1"	"521.31769"	"1561.93851"	"1561.93877"	"-0.17"	"-0.00009"	"14/80"	"14"	"80"	"2291445.46209717"	"HCD"	"MS2"	"4.487307"	"66.9"	"100.000"	"56.0029"	"17325"	"17325"	"17301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.1"	""	"77.3"	""	"84.1"	""	"155.2"	""	"130.8"	"115.8"	""	"728"	"57"	"35.000"	"28.000"	"7.36378981038891E-05"	"24"	"0"	"4.472E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"521.31769"	"1561.93851"	"1561.93877"	"-0.17"	"-0.00009"	"14/80"	"14"	"80"	"8121201.5947876"	"HCD"	"MS2"	"20.59231"	"190.9"	"100.000"	"55.1368"	"16917"	"16917"	"16891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.8"	""	"226.2"	""	"220.1"	""	"515.1"	"0.6"	"373.3"	"293.6"	""	"728"	"48"	"35.000"	"28.000"	"0.000609679206873623"	"24"	"0"	"3.384E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"521.31830"	"1561.94034"	"1561.93877"	"1.01"	"0.00052"	"15/80"	"15"	"80"	"5573935.9833374"	"HCD"	"MS2"	"8.645"	"141.9"	"100.000"	"55.7036"	"17203"	"17203"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.7"	""	"173.2"	""	"168.8"	""	"372.2"	""	"258.4"	"231.7"	""	"724"	"59"	"35.000"	"28.000"	"4.96259199351677E-05"	"25"	"0"	"5.213E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"781.47388"	"1561.94048"	"1561.93877"	"1.09"	"0.00085"	"10/80"	"10"	"80"	"3573256.11859131"	"HCD"	"MS2"	"7.832467"	"210.1"	"100.000"	"55.5275"	"17077"	"17077"	"17051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.0"	""	"245.0"	""	"252.8"	""	"562.8"	""	"396.1"	"334.5"	""	"723"	"58"	"35.000"	"28.000"	"5.48413707836551E-05"	"18"	"0"	"1.191E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"3"	"3"	"0.8814"	"0.0000"	"1"	"1"	"1"	"521.31836"	"1561.94052"	"1561.93877"	"1.12"	"0.00058"	"15/80"	"15"	"80"	"7321204.35986328"	"HCD"	"MS2"	"18.51248"	"190.6"	"100.000"	"55.5552"	"17088"	"17088"	"17067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.6"	""	"223.5"	""	"235.2"	""	"505.0"	"0.3"	"362.1"	"298.7"	""	"728"	"59"	"35.000"	"28.000"	"4.7764076324299E-05"	"24"	"0"	"3.346E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMVGLDAAGK"	"[R].iLmVGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"2"	"5"	"P84079; P84083"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2;ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P61751; P61206; P84079; P84082; P84083"	"ADP-ribosylation factor 4 OS=Rattus norvegicus OX=10116 GN=Arf4 PE=2 SV=2; ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1; ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"781.47461"	"1561.94194"	"1561.93877"	"2.03"	"0.00159"	"9/80"	"9"	"80"	"1202717.50946045"	"HCD"	"MS2"	"29.64296"	"96.6"	"100.000"	"55.5886"	"17156"	"17156"	"17125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.4"	""	"126.9"	""	"128.7"	""	"204.5"	"0.2"	"167.0"	"162.9"	""	"717"	"43"	"35.000"	"28.000"	"0.00188143474499544"	"16"	"0.0001889"	"0.0007979"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTVQLLTVK"	"[K].sDTVQLLTVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"781.48108"	"1561.95488"	"1561.95653"	"-1.05"	"-0.00082"	"15/96"	"15"	"96"	"1704660.51568604"	"HCD"	"MS2"	"30.59454"	"146.2"	"100.000"	"49.0176"	"14446"	"14446"	"14415"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.2"	""	"150.7"	""	"180.8"	""	"272.2"	""	"320.7"	"300.5"	""	"558"	"53"	"34.000"	"27.000"	"0.000143418178791497"	""	"0"	"2.983E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STEQILATLK"	"[K].sTEQILATLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"781.48181"	"1561.95635"	"1561.95653"	"-0.12"	"-0.00009"	"16/98"	"16"	"98"	"2833324.6973877"	"HCD"	"MS2"	"46.08984"	"234.0"	"100.000"	"54.7203"	"16800"	"16800"	"16773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"293.5"	""	"285.9"	""	"261.2"	""	"411.7"	""	"467.7"	"505.2"	""	"553"	"60"	"34.000"	"27.000"	"2.49859079484216E-05"	""	"0"	"3.656E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STEQILATLK"	"[K].sTEQILATLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"0"	"3"	"3"	"0.5938"	"0.0000"	"1"	"1"	"1"	"521.32367"	"1561.95646"	"1561.95653"	"-0.05"	"-0.00002"	"10/98"	"10"	"98"	"5661718.48168945"	"HCD"	"MS2"	"40.3773"	"143.5"	"100.000"	"54.7570"	"16815"	"16815"	"16789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.1"	""	"160.2"	""	"173.6"	""	"260.7"	""	"289.9"	"291.9"	""	"553"	"32"	"34.000"	"27.000"	"0.0174058459560015"	""	"0"	"0.0001485"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STEQILATLK"	"[K].sTEQILATLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"0"	"3"	"3"	"0.5588"	"0.0000"	"1"	"1"	"1"	"521.32373"	"1561.95664"	"1561.95653"	"0.07"	"0.00004"	"10/98"	"10"	"98"	"5252260.81622314"	"HCD"	"MS2"	"25.01095"	"136.2"	"100.000"	"54.5990"	"16697"	"16697"	"16672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.0"	""	"151.8"	""	"167.5"	""	"236.7"	""	"267.5"	"302.4"	""	"555"	"34"	"34.000"	"27.000"	"0.0117831928995102"	""	"0.0001308"	"0.0002242"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTVQLLTVK"	"[K].sDTVQLLTVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"781.48230"	"1561.95732"	"1561.95653"	"0.51"	"0.00040"	"15/96"	"15"	"96"	"1882155.1104126"	"HCD"	"MS2"	"41.83326"	"164.2"	"100.000"	"49.2834"	"14602"	"14602"	"14574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.8"	""	"194.1"	""	"204.9"	""	"299.8"	""	"336.3"	"325.1"	""	"593"	"51"	"34.000"	"27.000"	"0.00022804717554498"	"22"	"0"	"4.067E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPNQPYK"	"[R].kPNQPYk.[W]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"521.32660"	"1561.96524"	"1561.96692"	"-1.08"	"-0.00056"	"6/62"	"6"	"62"	"11026225.9289551"	"HCD"	"MS2"	"0"	"581.8"	"100.000"	"26.8185"	"5437"	"5437"	"5416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"819.0"	""	"762.8"	""	"819.3"	""	"984.5"	""	"1062.3"	"1071.5"	""	"498"	"17"	"33.000"	"26.000"	"0.528687871038055"	"17"	"0.0001889"	"0.0004147"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPNQPYK"	"[R].kPNQPYk.[W]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"521.32678"	"1561.96579"	"1561.96692"	"-0.72"	"-0.00038"	"6/62"	"6"	"62"	"9302500.80102539"	"HCD"	"MS2"	"10.44975"	"458.8"	"100.000"	"26.8884"	"5502"	"5502"	"5479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"656.2"	""	"619.2"	""	"648.0"	""	"751.4"	""	"818.6"	"855.1"	""	"496"	"16"	"33.000"	"26.000"	"0.604577082955451"	"19"	"0.0002277"	"0.001231"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPNQPYK"	"[R].kPNQPYk.[W]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.32776"	"1561.96872"	"1561.96692"	"1.15"	"0.00060"	"4/62"	"4"	"62"	"648431.748840332"	"HCD"	"MS2"	"29.93759"	"52.0"	"100.000"	"27.1074"	"5552"	"5552"	"5536"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.0"	""	"66.8"	""	"80.3"	""	"80.0"	"1.5"	"100.8"	"92.0"	""	"496"	"12"	"33.000"	"26.000"	"1.47384455336662"	"13"	"0.001966"	"0.02874"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATGTATPK"	"[K].kATGTATPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"1"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"521.33368"	"1561.98648"	"1561.98805"	"-1.00"	"-0.00052"	"6/88"	"6"	"88"	"22734747.5406494"	"HCD"	"MS2"	"19.07366"	"1077.0"	"100.000"	"24.3796"	"4480"	"4480"	"4458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1640.0"	""	"2014.9"	""	"2291.2"	""	"1400.4"	""	"1775.5"	"1034.9"	""	"376"	"25"	"32.000"	"25.000"	"0.0635561892067245"	"15"	"0"	"0.000178"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATGTATPK"	"[K].kATGTATPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"1"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"781.49707"	"1561.98686"	"1561.98805"	"-0.76"	"-0.00059"	"7/88"	"7"	"88"	"545624.490722656"	"HCD"	"MS2"	"100"	"42.3"	"100.000"	"24.4277"	"4500"	"4500"	"4472"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.1"	""	"87.5"	""	"92.9"	""	"54.9"	""	"67.6"	"45.4"	""	"384"	"19"	"32.000"	"25.000"	"0.234585534751655"	"19"	"0.00175"	"0.02411"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATGTATPK"	"[K].kATGTATPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"1"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"521.33392"	"1561.98722"	"1561.98805"	"-0.54"	"-0.00028"	"6/88"	"6"	"88"	"22577015.1782227"	"HCD"	"MS2"	"7.851431"	"1081.5"	"100.000"	"24.3273"	"4424"	"4424"	"4410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1605.5"	""	"2022.6"	""	"2314.1"	""	"1417.0"	"3.4"	"1782.4"	"1054.9"	""	"384"	"22"	"32.000"	"25.000"	"0.130407097462499"	"17"	"0.0001308"	"0.0002943"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATGTATPK"	"[K].kATGTATPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"1"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"781.49725"	"1561.98723"	"1561.98805"	"-0.53"	"-0.00041"	"12/88"	"12"	"88"	"502270.085388184"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"24.3914"	"4451"	"4451"	"4421"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.2"	""	"71.2"	""	"96.5"	""	"41.1"	""	"73.4"	"39.3"	""	"384"	"34"	"32.000"	"25.000"	"0.00755616144875093"	"20"	"0.0003839"	"0.002043"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNLLNDLYTR"	"[K].iVNLLNDLYTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"781.95886"	"1562.91045"	"1562.91036"	"0.06"	"0.00004"	"12/102"	"12"	"102"	"830548.264648438"	"HCD"	"MS2"	"18.69665"	"45.9"	"100.000"	"76.6014"	"25664"	"25664"	"25649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.4"	""	"65.6"	""	"58.0"	""	"73.7"	""	"94.2"	"91.8"	""	"819"	"20"	"36.000"	"29.000"	"0.383048623563423"	"19"	"0.0001889"	"0.0004641"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNLLNDLYTR"	"[K].iVNLLNDLYTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"781.95898"	"1562.91069"	"1562.91036"	"0.21"	"0.00017"	"10/102"	"10"	"102"	"2690214.91088867"	"HCD"	"MS2"	"8.676786"	"88.7"	"100.000"	"76.2933"	"25539"	"25539"	"25521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.1"	""	"98.9"	""	"120.9"	""	"153.2"	""	"178.5"	"197.0"	""	"835"	"21"	"36.000"	"29.000"	"0.306659539955596"	"22"	"0.0001308"	"0.0002358"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNLLNDLYTR"	"[K].iVNLLNDLYTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"781.95917"	"1562.91106"	"1562.91036"	"0.45"	"0.00035"	"9/102"	"9"	"102"	"2541703.55041504"	"HCD"	"MS2"	"14.04527"	"82.5"	"100.000"	"76.2438"	"25570"	"25570"	"25551"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.9"	""	"103.7"	""	"104.0"	""	"151.8"	""	"174.2"	"171.4"	""	"833"	"15"	"36.000"	"29.000"	"1.31708864546013"	"22"	"0.0001308"	"0.0002609"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDAILTEAIK"	"[K].mDAILTEAIk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"521.64508"	"1562.92069"	"1562.92279"	"-1.34"	"-0.00070"	"7/82"	"7"	"82"	"2083338.07244873"	"HCD"	"MS2"	"23.36537"	"49.4"	"100.000"	"65.0178"	"21002"	"21002"	"20979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.6"	""	"70.3"	""	"79.3"	""	"65.8"	""	"101.8"	"85.7"	""	"803"	"29"	"36.000"	"29.000"	"0.0452569778654467"	"24"	"0.0001889"	"0.0004296"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDAILTEAIK"	"[K].mDAILTEAIk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.8971"	"0.0000"	"1"	"1"	"1"	"781.96429"	"1562.92131"	"1562.92279"	"-0.94"	"-0.00074"	"9/82"	"9"	"82"	"884932.626037598"	"HCD"	"MS2"	"7.787024"	"78.9"	"100.000"	"65.0201"	"21003"	"21003"	"20979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.1"	""	"107.4"	""	"120.5"	""	"98.9"	""	"160.9"	"142.8"	""	"793"	"68"	"35.000"	"28.000"	"5.82429269085794E-06"	"24"	"0"	"1.311E-05"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDAILTEAIK"	"[K].mDAILTEAIk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"3"	"3"	"0.6571"	"0.0000"	"1"	"1"	"1"	"521.64600"	"1562.92344"	"1562.92279"	"0.41"	"0.00022"	"5/82"	"5"	"82"	"2433987.17370605"	"HCD"	"MS2"	"55.9183"	"61.8"	"100.000"	"64.9432"	"20919"	"20919"	"20889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.5"	""	"87.0"	""	"95.5"	""	"93.1"	"0.5"	"113.6"	"115.1"	""	"789"	"35"	"35.000"	"28.000"	"0.0129433593133125"	"27"	"7.476E-05"	"0.0001903"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDAILTEAIK"	"[K].mDAILTEAIk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"781.96619"	"1562.92510"	"1562.92279"	"1.48"	"0.00115"	"9/82"	"9"	"82"	"979238.386047363"	"HCD"	"MS2"	"14.33643"	"85.6"	"100.000"	"65.0101"	"20946"	"20946"	"20921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.8"	""	"117.1"	""	"123.9"	""	"123.6"	"0.0"	"184.9"	"156.5"	""	"789"	"66"	"35.000"	"28.000"	"9.7734300173633E-06"	""	"0"	"1.016E-05"	"1.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHSILQHK"	"[R].eLHSILQHk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"391.49036"	"1562.93960"	"1562.94188"	"-1.46"	"-0.00057"	"7/74"	"7"	"74"	"8159864.42089844"	"HCD"	"MS2"	"55.78898"	"261.0"	"80.052"	"31.1717"	"7169"	"7169"	"7142"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"535.1"	""	"368.8"	""	"351.5"	""	"390.0"	"6.4"	"405.6"	"407.3"	""	"626"	"12"	"34.000"	"27.000"	"2.05373468352809"	"13"	"0.0003839"	"0.001782"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHSILQHK"	"[R].eLHSILQHk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"4"	"4"	"0.6000"	"0.0000"	"1"	"1"	"1"	"391.49081"	"1562.94143"	"1562.94188"	"-0.29"	"-0.00011"	"7/74"	"7"	"74"	"4909812.36218262"	"HCD"	"MS2"	"37.50358"	"225.7"	"99.924"	"31.3369"	"7279"	"7279"	"7248"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.3"	""	"309.3"	""	"328.9"	""	"354.3"	"5.1"	"373.7"	"374.2"	""	"647"	"5"	"35.000"	"28.000"	"10.5165740704188"	"15"	"0.0004166"	"0.002185"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTLVETTLK"	"[K].lSTLVETTLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"521.66345"	"1562.97580"	"1562.97693"	"-0.72"	"-0.00038"	"10/84"	"10"	"84"	"3738115.49060059"	"HCD"	"MS2"	"39.31818"	"95.8"	"100.000"	"61.2102"	"19394"	"19394"	"19369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.2"	""	"130.4"	""	"129.8"	""	"172.5"	""	"179.9"	"182.5"	""	"454"	"30"	"33.000"	"26.000"	"0.0231220245088285"	"20"	"0.0001889"	"0.0008931"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTLVETTLK"	"[K].lSTLVETTLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"781.99176"	"1562.97624"	"1562.97693"	"-0.44"	"-0.00034"	"9/84"	"9"	"84"	"4070409.21112061"	"HCD"	"MS2"	"39.30621"	"247.6"	"100.000"	"61.3229"	"19493"	"19493"	"19475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.7"	""	"333.6"	""	"361.9"	""	"437.5"	"3.7"	"421.4"	"459.0"	""	"454"	"37"	"33.000"	"26.000"	"0.00494340118324168"	"15"	"0"	"0.0001473"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTLVETTLK"	"[K].lSTLVETTLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.66364"	"1562.97635"	"1562.97693"	"-0.37"	"-0.00019"	"10/84"	"10"	"84"	"4059846.94525146"	"HCD"	"MS2"	"44.33713"	"107.0"	"100.000"	"61.3437"	"19502"	"19502"	"19475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.1"	""	"136.8"	""	"155.9"	""	"184.3"	"1.4"	"189.6"	"206.7"	""	"454"	"25"	"33.000"	"26.000"	"0.0727823136662741"	"14"	"0.0003146"	"0.001437"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTLVETTLK"	"[K].lSTLVETTLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"781.99213"	"1562.97698"	"1562.97693"	"0.03"	"0.00002"	"9/84"	"9"	"84"	"3929334.93200684"	"HCD"	"MS2"	"31.75392"	"265.7"	"100.000"	"61.1664"	"19376"	"19376"	"19353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.5"	""	"375.3"	""	"364.5"	""	"459.9"	""	"473.8"	"510.2"	""	"436"	"38"	"33.000"	"26.000"	"0.00359299401352561"	"15"	"0"	"0.0001368"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLPIITFK"	"[K].vSSLPIITFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.66821"	"1562.99009"	"1562.99219"	"-1.34"	"-0.00070"	"13/84"	"13"	"84"	"7024493.90270996"	"HCD"	"MS2"	"39.54549"	"171.3"	"100.000"	"67.4385"	"21981"	"21981"	"21965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"261.9"	""	"243.9"	""	"264.7"	""	"275.8"	""	"290.0"	"287.2"	""	"361"	"41"	"32.000"	"25.000"	"0.0014773289425833"	"15"	"0"	"0.0001379"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLPIITFK"	"[K].vSSLPIITFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"781.99878"	"1562.99028"	"1562.99219"	"-1.22"	"-0.00095"	"18/84"	"18"	"84"	"12703969.1706543"	"HCD"	"MS2"	"0.6227245"	"646.5"	"91.514"	"67.7113"	"22092"	"22092"	"22074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"967.5"	""	"838.6"	""	"1030.0"	""	"990.2"	"3.8"	"1152.6"	"1137.0"	""	"361"	"68"	"32.000"	"25.000"	"2.57322170645196E-06"	""	"0"	"7.378E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLPIITFK"	"[K].vSSLPIITFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"781.99915"	"1562.99101"	"1562.99219"	"-0.75"	"-0.00059"	"8/84"	"8"	"84"	"3242071.02972412"	"HCD"	"MS2"	"100"	"218.3"	"100.000"	"67.4133"	"21971"	"21971"	"21949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"320.5"	""	"301.2"	""	"328.7"	""	"358.3"	""	"394.4"	"363.9"	""	"355"	"44"	"32.000"	"25.000"	"0.000726437671020769"	"18"	"0"	"6.117E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLPIITFK"	"[K].vSSLPIITFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.66870"	"1562.99155"	"1562.99219"	"-0.41"	"-0.00021"	"8/84"	"8"	"84"	"20003663.0499268"	"HCD"	"MS2"	"4.129599"	"236.8"	"50.775"	"67.7504"	"22108"	"22108"	"22090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.6"	""	"312.3"	""	"358.8"	""	"379.6"	"3.7"	"429.9"	"416.1"	""	"355"	"48"	"32.000"	"25.000"	"0.000287209206681644"	"16"	"0"	"0.0001356"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLPIITFK"	"[K].vSSLPIITFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.66882"	"1562.99192"	"1562.99219"	"-0.17"	"-0.00009"	"11/84"	"11"	"84"	"1586229.39752197"	"HCD"	"MS2"	"19.237"	"48.9"	"100.000"	"68.1668"	"22227"	"22227"	"22202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.8"	""	"65.8"	""	"73.0"	""	"77.3"	""	"90.1"	"90.5"	""	"355"	"32"	"32.000"	"25.000"	"0.0109193894906002"	"15"	"0.0001889"	"0.0004108"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLPIITFK"	"[K].vSSLPIITFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"0.9796"	"0.0000"	"1"	"1"	"1"	"521.66882"	"1562.99192"	"1562.99219"	"-0.17"	"-0.00009"	"8/84"	"8"	"84"	"20382115.0942383"	"HCD"	"MS2"	"4.919713"	"322.7"	"66.777"	"67.8361"	"22092"	"22092"	"22074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"451.2"	""	"446.7"	""	"513.7"	""	"475.3"	""	"594.4"	"575.5"	""	"355"	"49"	"32.000"	"25.000"	"0.000208064677384793"	"16"	"0"	"0.000131"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLPIITFK"	"[K].vSSLPIITFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"781.99969"	"1562.99211"	"1562.99219"	"-0.05"	"-0.00004"	"9/84"	"9"	"84"	"3769589.18475342"	"HCD"	"MS2"	"0"	"254.7"	"100.000"	"67.5450"	"21974"	"21974"	"21955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.5"	""	"354.1"	""	"386.5"	""	"433.8"	"2.8"	"435.2"	"444.6"	""	"355"	"44"	"32.000"	"25.000"	"0.000709901930825948"	"21"	"0"	"0.0001292"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLPIITFK"	"[K].vSSLPIITFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.9104"	"0.0000"	"1"	"1"	"1"	"781.99982"	"1562.99236"	"1562.99219"	"0.11"	"0.00009"	"9/84"	"9"	"84"	"13606824.2390137"	"HCD"	"MS2"	"0"	"474.1"	"62.053"	"67.8317"	"22091"	"22091"	"22074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"703.0"	""	"630.2"	""	"739.4"	""	"728.7"	"0.7"	"831.3"	"854.7"	""	"355"	"67"	"32.000"	"25.000"	"3.36665301014979E-06"	"23"	"0"	"5.745E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLPIITFK"	"[K].vSSLPIITFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.66901"	"1562.99247"	"1562.99219"	"0.18"	"0.00009"	"13/84"	"13"	"84"	"3900375.3067627"	"HCD"	"MS2"	"41.55544"	"105.5"	"100.000"	"67.5130"	"21961"	"21961"	"21945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.5"	""	"152.1"	""	"161.2"	""	"176.7"	"0.4"	"177.1"	"173.6"	""	"360"	"45"	"32.000"	"25.000"	"0.000631353373114622"	"15"	"0"	"8.906E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFYFLEMNTR"	"[K].nFYFLEMNTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.39386"	"1563.78044"	"1563.78272"	"-1.45"	"-0.00114"	"6/96"	"6"	"96"	"798336.648132324"	"HCD"	"MS2"	"44.44281"	"66.3"	"100.000"	"60.9613"	"19346"	"19346"	"19315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.1"	""	"95.9"	""	"98.4"	""	"92.5"	""	"118.8"	"127.6"	""	"787"	"33"	"35.000"	"28.000"	"0.0191842460855683"	"15"	"0.0001889"	"0.0006685"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFYFLEMNTR"	"[K].nFYFLEMNTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.39520"	"1563.78313"	"1563.78272"	"0.26"	"0.00021"	"6/96"	"6"	"96"	"1022260.23913574"	"HCD"	"MS2"	"16.33277"	"87.3"	"100.000"	"60.8670"	"19254"	"19254"	"19225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.5"	""	"130.2"	""	"124.9"	""	"138.9"	""	"144.4"	"152.3"	""	"821"	"14"	"36.000"	"29.000"	"1.48700750850055"	"13"	"0.0004166"	"0.002299"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].gGNNLVSGYPk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"782.44794"	"1563.88860"	"1563.88951"	"-0.59"	"-0.00046"	"15/96"	"15"	"96"	"4084836.79815674"	"HCD"	"MS2"	"0"	"301.4"	"100.000"	"35.8545"	"9119"	"9119"	"9097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"635.5"	""	"504.9"	""	"352.9"	""	"458.9"	""	"472.0"	"420.8"	""	"1027"	"52"	"37.000"	"30.000"	"0.000353622954172786"	"19"	"0"	"1.024E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].gGNNLVSGYPk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"782.44806"	"1563.88884"	"1563.88951"	"-0.43"	"-0.00034"	"9/96"	"9"	"96"	"3732966.8114624"	"HCD"	"MS2"	"0"	"279.4"	"100.000"	"35.7469"	"9032"	"9032"	"9003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"568.6"	""	"469.8"	""	"335.8"	""	"433.9"	"3.9"	"427.3"	"398.1"	""	"1027"	"48"	"37.000"	"30.000"	"0.000898546274608761"	"19"	"0"	"7.899E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWDIAVATMK"	"[K].aWDIAVATMk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"782.45105"	"1563.89482"	"1563.89691"	"-1.33"	"-0.00104"	"16/82"	"16"	"82"	"2537096.55230713"	"HCD"	"MS2"	"11.41132"	"193.5"	"100.000"	"61.1410"	"19419"	"19419"	"19395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.4"	""	"290.1"	""	"291.3"	""	"295.4"	"7.0"	"322.2"	"345.8"	""	"925"	"57"	"36.000"	"29.000"	"0.000103302715305912"	"19"	"0"	"4.957E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWDIAVATMK"	"[K].aWDIAVATMk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"782.45117"	"1563.89507"	"1563.89691"	"-1.18"	"-0.00092"	"16/82"	"16"	"82"	"1948205.00701904"	"HCD"	"MS2"	"43.45768"	"148.9"	"100.000"	"60.9476"	"19287"	"19287"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.7"	""	"216.0"	""	"227.0"	""	"226.1"	"1.0"	"252.1"	"256.6"	""	"923"	"57"	"36.000"	"29.000"	"0.00010236976477378"	"19"	"0"	"1.743E-05"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWDIAVATMK"	"[K].aWDIAVATMk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"521.97046"	"1563.89682"	"1563.89691"	"-0.05"	"-0.00003"	"11/82"	"11"	"82"	"4484977.82592773"	"HCD"	"MS2"	"11.26152"	"128.6"	"100.000"	"61.1733"	"19432"	"19432"	"19411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.8"	""	"191.9"	""	"195.2"	""	"205.0"	"0.9"	"223.2"	"229.1"	""	"917"	"33"	"36.000"	"29.000"	"0.0235689014250543"	"21"	"0"	"0.0001065"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWDIAVATMK"	"[K].aWDIAVATMk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"521.97052"	"1563.89701"	"1563.89691"	"0.06"	"0.00003"	"11/82"	"11"	"82"	"4041220.03167725"	"HCD"	"MS2"	"11.52918"	"130.3"	"100.000"	"60.9868"	"19303"	"19303"	"19273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.6"	""	"203.3"	""	"191.6"	""	"192.2"	"1.8"	"237.4"	"239.6"	""	"917"	"46"	"36.000"	"29.000"	"0.00120597787428403"	"22"	"0"	"6.706E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQNLANFAK"	"[K].vTQNLANFAk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P730"	"Disabled homolog 2-interacting protein OS=Rattus norvegicus OX=10116 GN=Dab2ip PE=1 SV=1"	"Q6P730"	"Disabled homolog 2-interacting protein OS=Rattus norvegicus OX=10116 GN=Dab2ip PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.46625"	"1563.92522"	"1563.92590"	"-0.43"	"-0.00034"	"12/86"	"12"	"86"	"1142776.31738281"	"HCD"	"MS2"	"0"	"108.3"	"100.000"	"44.5569"	"12625"	"12625"	"12604"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.3"	""	"102.4"	""	"111.9"	""	"218.5"	"0.4"	"237.8"	"236.2"	""	"745"	"7"	"35.000"	"28.000"	"7.7647285395374"	"13"	"0.0002277"	"0.001264"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RQDLFIVSK"	"[K].rQDLFIVSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"1"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"521.99219"	"1563.96201"	"1563.96228"	"-0.18"	"-0.00009"	"6/90"	"6"	"90"	"26551837.9151001"	"HCD"	"MS2"	"16.68869"	"561.7"	"72.634"	"39.5307"	"10628"	"10628"	"10606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"992.3"	""	"1037.7"	""	"933.0"	""	"690.1"	"9.0"	"727.5"	"908.6"	""	"485"	"25"	"33.000"	"26.000"	"0.0827392810683177"	"15"	"0.0001889"	"0.0004135"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFYSTFATDDR"	"[K].lFYSTFATDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"782.89594"	"1564.78459"	"1564.78449"	"0.07"	"0.00005"	"11/92"	"11"	"92"	"1497858.78149414"	"HCD"	"MS2"	"50.81118"	"117.6"	"100.000"	"55.9317"	"17296"	"17296"	"17269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.1"	""	"136.8"	""	"144.7"	""	"229.9"	"6.5"	"239.0"	"219.8"	""	"784"	"1"	"35.000"	"28.000"	"33.0587225043596"	"13"	"0.0006037"	"0.005903"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFYSTFATDDR"	"[K].lFYSTFATDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.89667"	"1564.78606"	"1564.78449"	"1.00"	"0.00078"	"7/92"	"7"	"92"	"2468418.19067383"	"HCD"	"MS2"	"38.63751"	"171.2"	"100.000"	"55.6427"	"17124"	"17124"	"17099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.1"	""	"195.1"	""	"230.8"	""	"351.9"	"1.7"	"350.5"	"305.0"	""	"802"	"10"	"36.000"	"29.000"	"3.733742580626"	"13"	"0.0001889"	"0.0008099"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIWDTAGQER"	"[K].fLIWDTAGQER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"782.91895"	"1564.83061"	"1564.83211"	"-0.95"	"-0.00075"	"8/94"	"8"	"94"	"1321360.38348389"	"HCD"	"MS2"	"52.21559"	"81.2"	"100.000"	"62.9410"	"20101"	"20101"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.1"	""	"117.9"	""	"106.6"	""	"114.3"	"0.1"	"152.5"	"155.3"	""	"1058"	"19"	"37.000"	"30.000"	"0.652312456778092"	"23"	"0.0001889"	"0.0005161"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIWDTAGQER"	"[K].fLIWDTAGQER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"782.91919"	"1564.83110"	"1564.83211"	"-0.64"	"-0.00050"	"12/94"	"12"	"94"	"1173403.11053467"	"HCD"	"MS2"	"36.5388"	"70.4"	"100.000"	"63.0708"	"20207"	"20207"	"20179"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.6"	""	"109.6"	""	"103.1"	""	"102.1"	"0.4"	"115.7"	"131.7"	""	"1067"	"17"	"37.000"	"30.000"	"1.15913607892381"	"19"	"0.0001889"	"0.0006116"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGIIDTLFQDR"	"[R].aSGIIDTLFQDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.92920"	"1564.85112"	"1564.85324"	"-1.35"	"-0.00106"	"11/110"	"11"	"110"	"1666679.67218018"	"HCD"	"MS2"	"23.58573"	"91.0"	"100.000"	"66.8191"	"21737"	"21737"	"21715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.0"	""	"111.5"	""	"118.0"	""	"163.5"	"0.9"	"173.7"	"164.9"	""	"1140"	"38"	"37.000"	"30.000"	"0.00872719853158758"	"15"	"0"	"1.959E-05"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGIIDTLFQDR"	"[R].aSGIIDTLFQDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.93091"	"1564.85454"	"1564.85324"	"0.83"	"0.00065"	"10/110"	"10"	"110"	"1990681.84893799"	"HCD"	"MS2"	"41.17058"	"102.2"	"100.000"	"66.9280"	"21729"	"21729"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.4"	""	"129.6"	""	"137.3"	""	"174.9"	""	"207.4"	"189.3"	""	"1125"	"32"	"37.000"	"30.000"	"0.0332753419223704"	"15"	"0"	"4.279E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYMYEILK"	"[R].fYMYEILk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"782.94458"	"1564.88188"	"1564.88494"	"-1.96"	"-0.00153"	"14/56"	"14"	"56"	"665455.034912109"	"HCD"	"MS2"	"22.7614"	"62.5"	"100.000"	"71.1413"	"23441"	"23441"	"23411"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.7"	""	"101.3"	""	"100.0"	""	"100.8"	""	"112.5"	"107.4"	""	"1065"	"38"	"37.000"	"30.000"	"0.00861627620044933"	"26"	"0"	"0.0001635"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYMYEILK"	"[R].fYMYEILk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"782.94641"	"1564.88555"	"1564.88494"	"0.38"	"0.00030"	"5/56"	"5"	"56"	"368567.203308105"	"HCD"	"MS2"	"16.60948"	"35.4"	"100.000"	"73.8281"	"24590"	"24590"	"24559"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.6"	""	"56.6"	""	"50.3"	""	"56.9"	""	"59.7"	"72.9"	""	"1072"	"25"	"37.000"	"30.000"	"0.175454612455057"	"20"	"0.0001889"	"0.0006642"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYMYEILK"	"[R].fYMYEILk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"782.94696"	"1564.88664"	"1564.88494"	"1.09"	"0.00085"	"6/56"	"6"	"56"	"309973.529663086"	"HCD"	"MS2"	"0"	"31.3"	"100.000"	"73.8812"	"24560"	"24560"	"24529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.7"	""	"39.0"	""	"49.3"	""	"55.7"	""	"57.9"	"58.2"	""	"1085"	"23"	"37.000"	"30.000"	"0.248541973542634"	"24"	"0.0002723"	"0.001376"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQDLLTSLTK"	"[R].sqDLLTSLTk.[L]"	"N-Term(TMT6plex); Q2(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35293"	"Cytochrome P450 2F2 OS=Rattus norvegicus OX=10116 GN=Cyp2f2 PE=2 SV=1"	"O35293"	"Cytochrome P450 2F2 OS=Rattus norvegicus OX=10116 GN=Cyp2f2 PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"782.95630"	"1564.90532"	"1564.91981"	"-9.26"	"-0.00724"	"7/104"	"7"	"104"	"3319101.17315674"	"HCD"	"MS2"	"5.06462"	"292.2"	"100.000"	"52.0384"	"15671"	"15671"	"15650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"367.5"	""	"329.9"	""	"349.9"	""	"512.3"	"3.0"	"664.8"	"549.1"	""	"957"	"13"	"36.000"	"29.000"	"2.62955308140873"	"16"	"0.001523"	"0.02053"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQDLLTSLTK"	"[R].sqDLLTSLTk.[L]"	"N-Term(TMT6plex); Q2(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35293"	"Cytochrome P450 2F2 OS=Rattus norvegicus OX=10116 GN=Cyp2f2 PE=2 SV=1"	"O35293"	"Cytochrome P450 2F2 OS=Rattus norvegicus OX=10116 GN=Cyp2f2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.95673"	"1564.90618"	"1564.91981"	"-8.71"	"-0.00682"	"16/104"	"16"	"104"	"3324791.48883057"	"HCD"	"MS2"	"0"	"300.0"	"100.000"	"52.1924"	"15784"	"15784"	"15766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"364.9"	""	"334.2"	""	"373.8"	""	"545.1"	"1.0"	"654.5"	"576.1"	""	"969"	"13"	"36.000"	"29.000"	"2.37297837984012"	"13"	"0.00109"	"0.01471"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIVALMYPPYR"	"[R].lIVALMYPPYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"782.95959"	"1564.91191"	"1564.91227"	"-0.23"	"-0.00018"	"12/82"	"12"	"82"	"368457.350585938"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"75.9074"	"25386"	"25386"	"25361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.2"	""	"42.5"	""	"44.2"	""	"39.0"	"0.8"	"45.1"	"47.4"	""	"857"	"33"	"36.000"	"29.000"	"0.0207946122319469"	"22"	"0.0001308"	"0.000223"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIVALMYPPYR"	"[R].lIVALMYPPYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"782.95984"	"1564.91240"	"1564.91227"	"0.08"	"0.00006"	"11/82"	"11"	"82"	"386876.520812988"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"75.8951"	"25433"	"25433"	"25407"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.6"	""	"39.7"	""	"42.6"	""	"41.6"	"2.9"	"42.3"	"47.9"	""	"852"	"28"	"36.000"	"29.000"	"0.0747153093784591"	"20"	"0.0001889"	"0.0003798"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMLPLDNLK"	"[K].yMLPLDNLk.[IV]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"522.31042"	"1564.91672"	"1564.91731"	"-0.37"	"-0.00020"	"6/68"	"6"	"68"	"5326899.73577881"	"HCD"	"MS2"	"16.28341"	"138.0"	"100.000"	"62.5130"	"19979"	"19979"	"19955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.2"	""	"209.3"	""	"204.1"	""	"148.0"	""	"255.6"	"280.2"	""	"830"	"31"	"36.000"	"29.000"	"0.0369018463911049"	"23"	"0.0001889"	"0.0005681"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMLPLDNLK"	"[K].yMLPLDNLk.[IV]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"522.31079"	"1564.91782"	"1564.91731"	"0.33"	"0.00017"	"7/68"	"7"	"68"	"4981805.27502441"	"HCD"	"MS2"	"16.64273"	"143.7"	"100.000"	"62.3832"	"19873"	"19873"	"19849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.5"	""	"218.6"	""	"220.6"	""	"173.9"	"1.3"	"251.5"	"270.8"	""	"816"	"37"	"36.000"	"29.000"	"0.00886462080976408"	"22"	"0.0001889"	"0.0005367"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIDLFTDAIK"	"[K].aIDLFTDAIk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"522.31586"	"1564.93302"	"1564.93507"	"-1.31"	"-0.00068"	"12/80"	"12"	"80"	"6845061.77093506"	"HCD"	"MS2"	"5.740563"	"150.0"	"100.000"	"68.4975"	"22413"	"22413"	"22394"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.9"	""	"199.8"	""	"221.8"	""	"270.9"	""	"253.3"	"266.4"	""	"702"	"35"	"35.000"	"28.000"	"0.0110485965824956"	"21"	"0.0001308"	"0.0002232"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIDLFTDAIK"	"[K].aIDLFTDAIk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"2"	"2"	"0.8841"	"0.0000"	"1"	"1"	"1"	"782.97058"	"1564.93389"	"1564.93507"	"-0.75"	"-0.00059"	"18/80"	"18"	"80"	"5118503.57354736"	"HCD"	"MS2"	"13.97778"	"379.6"	"100.000"	"68.4631"	"22399"	"22399"	"22378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"548.2"	""	"510.0"	""	"510.6"	""	"698.4"	""	"644.3"	"683.6"	""	"675"	"69"	"35.000"	"28.000"	"4.17132258787522E-06"	"25"	"0"	"3.813E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIDLFTDAIK"	"[K].aIDLFTDAIk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"522.31641"	"1564.93467"	"1564.93507"	"-0.26"	"-0.00013"	"8/80"	"8"	"80"	"6293358.44842529"	"HCD"	"MS2"	"2.561763"	"142.7"	"100.000"	"68.6026"	"22405"	"22405"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.9"	""	"190.3"	""	"201.6"	""	"246.6"	"0.5"	"238.9"	"267.7"	""	"671"	"34"	"35.000"	"28.000"	"0.0133257764846997"	"20"	"7.476E-05"	"0.0001981"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIDLFTDAIK"	"[K].aIDLFTDAIk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"2"	"2"	"0.8841"	"0.0000"	"1"	"1"	"1"	"782.97131"	"1564.93535"	"1564.93507"	"0.18"	"0.00014"	"18/80"	"18"	"80"	"4718399.43023682"	"HCD"	"MS2"	"16.87692"	"266.7"	"100.000"	"68.5817"	"22396"	"22396"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"379.5"	""	"342.6"	""	"366.9"	""	"474.9"	"1.1"	"462.8"	"498.3"	""	"675"	"69"	"35.000"	"28.000"	"4.27832504727022E-06"	"25"	"0"	"5.333E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFLELTELK"	"[R].nFLELTELk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"782.97137"	"1564.93547"	"1564.93507"	"0.26"	"0.00020"	"8/86"	"8"	"86"	"1431356.72113037"	"HCD"	"MS2"	"0"	"125.1"	"100.000"	"67.4643"	"21942"	"21942"	"21918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.2"	""	"155.1"	""	"164.6"	""	"223.9"	"2.0"	"233.8"	"247.1"	""	"675"	"41"	"35.000"	"28.000"	"0.00251926455963397"	"25"	"0"	"0.0001421"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASVLLQDHIR"	"[R].aLASVLLQDHIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.9306"	"0.0000"	"1"	"1"	"1"	"522.31677"	"1564.93576"	"1564.93724"	"-0.94"	"-0.00049"	"10/106"	"10"	"106"	"16127134.0397949"	"HCD"	"MS2"	"23.99745"	"156.9"	"93.784"	"48.7670"	"14343"	"14343"	"14319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.7"	"3.0"	"184.5"	""	"188.7"	""	"294.6"	""	"312.0"	"317.4"	""	"675"	"72"	"35.000"	"28.000"	"2.16907104594494E-06"	"22"	"0"	"5.042E-06"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEYLNDLK"	"[K].vLEYLNDLk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"782.97162"	"1564.93596"	"1564.93507"	"0.57"	"0.00045"	"8/78"	"8"	"78"	"1124657.79077148"	"HCD"	"MS2"	"58.0845"	"97.5"	"100.000"	"70.5556"	"23202"	"23202"	"23171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.4"	""	"143.4"	""	"140.5"	""	"131.5"	"0.5"	"176.3"	"201.4"	""	"676"	"24"	"35.000"	"28.000"	"0.129394763241086"	"27"	"7.476E-05"	"0.0001874"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASVLLQDHIR"	"[R].aLASVLLQDHIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"522.31708"	"1564.93668"	"1564.93724"	"-0.36"	"-0.00019"	"11/106"	"11"	"106"	"20327757.2730713"	"HCD"	"MS2"	"14.64133"	"135.5"	"69.782"	"49.0766"	"14517"	"14517"	"14495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.7"	""	"143.3"	""	"159.2"	""	"273.1"	"1.9"	"275.8"	"279.7"	""	"662"	"81"	"35.000"	"28.000"	"2.92299447038544E-07"	"21"	"0"	"1.049E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLIIYLEK"	"[K].nTLIIYLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"522.32892"	"1564.97220"	"1564.97145"	"0.48"	"0.00025"	"10/92"	"10"	"92"	"5077705.04705811"	"HCD"	"MS2"	"7.990697"	"142.3"	"100.000"	"63.5562"	"20352"	"20352"	"20329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.9"	""	"245.6"	""	"198.9"	""	"237.2"	"1.7"	"232.9"	"235.9"	""	"375"	"27"	"32.000"	"25.000"	"0.0364755015304249"	"21"	"0.0001859"	"0.0003507"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYAMHWGTDSR"	"[K].iYAMHWGTDSR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"783.38928"	"1565.77129"	"1565.77321"	"-1.23"	"-0.00096"	"14/84"	"14"	"84"	"1148235.68328857"	"HCD"	"MS2"	"13.2548"	"67.1"	"100.000"	"39.6154"	"10663"	"10663"	"10638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.7"	""	"105.8"	""	"92.6"	""	"93.6"	"1.6"	"139.2"	"134.6"	""	"704"	"39"	"35.000"	"28.000"	"0.00493790424005809"	"23"	"0"	"0.0001706"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYAMHWGTDSR"	"[K].iYAMHWGTDSR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"783.38965"	"1565.77202"	"1565.77321"	"-0.76"	"-0.00060"	"14/84"	"14"	"84"	"1224954.08569336"	"HCD"	"MS2"	"0"	"73.7"	"100.000"	"39.5106"	"10577"	"10577"	"10550"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.8"	""	"107.8"	""	"91.5"	""	"110.7"	""	"140.7"	"158.4"	""	"710"	"35"	"35.000"	"28.000"	"0.0101678317931684"	"21"	"0.0001889"	"0.0003784"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYAMHWGTDSR"	"[K].iYAMHWGTDSR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"522.59583"	"1565.77292"	"1565.77321"	"-0.19"	"-0.00010"	"10/84"	"10"	"84"	"57768489.6564941"	"HCD"	"MS2"	"38.78168"	"194.4"	"22.326"	"39.5604"	"10640"	"10640"	"10622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.3"	""	"293.9"	""	"298.9"	""	"268.1"	""	"340.2"	"374.0"	""	"728"	"44"	"35.000"	"28.000"	"0.00150349290724419"	"21"	"0"	"0.0001727"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYAMHWGTDSR"	"[K].iYAMHWGTDSR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"522.59595"	"1565.77329"	"1565.77321"	"0.05"	"0.00003"	"6/84"	"6"	"84"	"59318146.3171387"	"HCD"	"MS2"	"38.55683"	"199.4"	"22.688"	"39.4510"	"10552"	"10552"	"10534"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"268.7"	""	"323.5"	""	"296.3"	""	"259.2"	""	"357.8"	"387.4"	""	"725"	"44"	"35.000"	"28.000"	"0.0013750168205296"	"23"	"7.476E-05"	"0.0001863"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVTNFLAGFEP"	"[K].eIVTNFLAGFEP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"783.42383"	"1565.84038"	"1565.84128"	"-0.57"	"-0.00045"	"7/108"	"7"	"108"	"160878.198242188"	"HCD"	"MS2"	"4.089716"	"2.5"	"100.000"	"96.9170"	"33299"	"33299"	"33293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.7"	""	"3.7"	""	"7.1"	""	"7.2"	"3.3"	""	"1016"	"43"	"37.000"	"30.000"	"0.00227962658086031"	"16"	"0.0001889"	"0.0008581"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVTNFLAGFEP"	"[K].eIVTNFLAGFEP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.42401"	"1565.84075"	"1565.84128"	"-0.34"	"-0.00026"	"6/108"	"6"	"108"	"147311.734191895"	"HCD"	"MS2"	"12.8687"	"1.7"	"100.000"	"96.6541"	"33216"	"33216"	"33211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	"2.1"	""	"4.2"	""	"6.5"	"4.1"	""	"1020"	"37"	"37.000"	"30.000"	"0.0101758378063413"	"15"	"0.0006037"	"0.004318"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVTNFLAGFEP"	"[K].eIVTNFLAGFEP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.42413"	"1565.84099"	"1565.84128"	"-0.18"	"-0.00014"	"8/108"	"8"	"108"	"232681.148986816"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"96.7312"	"33236"	"33236"	"33230"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"5.3"	""	"3.8"	""	"5.4"	""	"7.3"	"7.8"	""	"1042"	"62"	"37.000"	"30.000"	"3.03974899326621E-05"	"16"	"0.0001859"	"0.000363"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVTNFLAGFEP"	"[K].eIVTNFLAGFEP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.42450"	"1565.84172"	"1565.84128"	"0.29"	"0.00022"	"4/108"	"4"	"108"	"69747.0902099609"	"HCD"	"MS2"	"14.06166"	"2.6"	"100.000"	"96.4691"	"33152"	"33152"	"33148"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.2"	""	"3.1"	""	"3.7"	""	"5.4"	""	"3.4"	"6.9"	""	"1033"	"15"	"37.000"	"30.000"	"1.49303615924177"	"13"	"0.006783"	"0.2514"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEACTFHK"	"[R].lLEAcTFHk.[S]"	"N-Term(TMT6plex); C5(Methylthio); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8431"	"0.0000"	"1"	"1"	"1"	"522.62408"	"1565.85770"	"1565.85841"	"-0.45"	"-0.00024"	"14/70"	"14"	"70"	"8794592.82867432"	"HCD"	"MS2"	"24.60053"	"246.3"	"89.364"	"56.5762"	"17559"	"17559"	"17541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"399.3"	""	"387.5"	""	"365.3"	""	"278.6"	"2.7"	"403.4"	"494.2"	""	"971"	"51"	"36.000"	"29.000"	"0.000410382879325321"	"24"	"0"	"2.65E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEACTFHK"	"[R].lLEAcTFHk.[S]"	"N-Term(TMT6plex); C5(Methylthio); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"522.62433"	"1565.85843"	"1565.85841"	"0.01"	"0.00001"	"10/70"	"10"	"70"	"8704036.26196289"	"HCD"	"MS2"	"73.69324"	"277.4"	"100.000"	"56.0779"	"17302"	"17302"	"17275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"414.4"	""	"472.2"	""	"434.2"	""	"373.4"	""	"438.9"	"492.5"	""	"974"	"29"	"36.000"	"29.000"	"0.065392653607414"	"20"	"0"	"6.888E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEACTFHK"	"[R].lLEAcTFHk.[S]"	"N-Term(TMT6plex); C5(Methylthio); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"522.62463"	"1565.85935"	"1565.85841"	"0.60"	"0.00031"	"7/70"	"7"	"70"	"8032630.5869751"	"HCD"	"MS2"	"22.57461"	"238.5"	"100.000"	"56.3730"	"17422"	"17422"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.3"	""	"386.3"	""	"361.8"	""	"288.2"	""	"397.7"	"451.6"	""	"955"	"40"	"36.000"	"29.000"	"0.00522364164894925"	"19"	"0"	"3.547E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAGYDVEK"	"[K].aLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"783.44830"	"1565.88933"	"1565.89393"	"-2.94"	"-0.00230"	"9/84"	"9"	"84"	"1180909.24829102"	"HCD"	"MS2"	"0"	"84.7"	"100.000"	"40.5309"	"11036"	"11036"	"11005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.1"	""	"141.6"	""	"170.9"	""	"120.3"	"0.8"	"153.8"	"110.6"	""	"869"	"60"	"36.000"	"29.000"	"4.69883051838955E-05"	"24"	"0"	"4.781E-06"	"1.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAGYDVEK"	"[K].aLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"783.45001"	"1565.89275"	"1565.89393"	"-0.75"	"-0.00059"	"10/84"	"10"	"84"	"1180281.15856934"	"HCD"	"MS2"	"0"	"90.0"	"100.000"	"40.3665"	"10924"	"10924"	"10901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.2"	""	"154.3"	""	"174.7"	""	"120.4"	""	"176.0"	"125.9"	""	"847"	"51"	"36.000"	"29.000"	"0.000319046081241229"	"23"	"0"	"7.108E-06"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSAEVK"	"[K].gPSYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"783.45166"	"1565.89604"	"1565.89393"	"1.35"	"0.00106"	"10/92"	"10"	"92"	"347913.414855957"	"HCD"	"MS2"	"100"	"38.0"	"100.000"	"38.6937"	"10285"	"10285"	"10257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.5"	""	"53.4"	""	"48.6"	""	"69.3"	""	"69.0"	"68.8"	""	"833"	"24"	"36.000"	"29.000"	"0.151920018894516"	"25"	"0.000523"	"0.002962"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSDLVPIGVPHR"	"[R].fSDLVPIGVPHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"522.63800"	"1565.89945"	"1565.90013"	"-0.43"	"-0.00023"	"8/90"	"8"	"90"	"17118309.809082"	"HCD"	"MS2"	"38.01925"	"273.2"	"81.344"	"52.5909"	"15947"	"15947"	"15926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"323.5"	""	"271.3"	""	"294.0"	""	"511.6"	"3.0"	"590.0"	"604.2"	""	"885"	"17"	"36.000"	"29.000"	"0.833514722099236"	"17"	"0.002804"	"0.04511"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSDLVPIGVPHR"	"[R].fSDLVPIGVPHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"522.63812"	"1565.89981"	"1565.90013"	"-0.20"	"-0.00010"	"7/90"	"7"	"90"	"15412509.7290649"	"HCD"	"MS2"	"32.03623"	"289.7"	"100.000"	"52.3856"	"15813"	"15813"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.2"	""	"303.7"	""	"329.0"	""	"537.2"	""	"647.6"	"609.3"	""	"884"	"19"	"36.000"	"29.000"	"0.530178691992025"	"19"	"0.00103"	"0.01188"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSDLVPIGVPHR"	"[R].fSDLVPIGVPHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.5500"	"0.0000"	"1"	"1"	"1"	"522.63824"	"1565.90018"	"1565.90013"	"0.03"	"0.00002"	"11/90"	"11"	"90"	"39999900.288208"	"HCD"	"MS2"	"5.679188"	"226.9"	"66.487"	"52.2708"	"15816"	"15816"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.9"	""	"231.4"	""	"255.6"	""	"355.3"	"0.4"	"617.1"	"477.9"	""	"868"	"40"	"36.000"	"29.000"	"0.00476968534313714"	""	"0"	"7.184E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSDLVPIGVPHR"	"[R].fSDLVPIGVPHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.4516"	"0.0000"	"1"	"1"	"1"	"522.63861"	"1565.90128"	"1565.90013"	"0.74"	"0.00038"	"7/90"	"7"	"90"	"36613068.5092773"	"HCD"	"MS2"	"10.41826"	"244.5"	"68.598"	"52.0705"	"15684"	"15684"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.2"	"2.7"	"255.5"	""	"264.1"	""	"378.7"	""	"654.2"	"516.8"	""	"881"	"31"	"36.000"	"29.000"	"0.0351516659741544"	""	"0.0001308"	"0.0002816"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAQDYGVLK"	"[R].tIAQDYGVLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"783.46729"	"1565.92729"	"1565.93031"	"-1.93"	"-0.00151"	"16/92"	"16"	"92"	"4741660.33288574"	"HCD"	"MS2"	"0"	"389.3"	"100.000"	"45.8723"	"13208"	"13208"	"13190"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"595.5"	""	"535.3"	""	"604.1"	""	"606.5"	"1.3"	"658.7"	"681.7"	""	"709"	"53"	"35.000"	"28.000"	"0.000192582242514068"	"24"	"0"	"7.854E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAQDYGVLK"	"[R].tIAQDYGVLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"783.46790"	"1565.92851"	"1565.93031"	"-1.15"	"-0.00090"	"16/92"	"16"	"92"	"6835604.19451904"	"HCD"	"MS2"	"16.65898"	"529.9"	"100.000"	"45.6562"	"13070"	"13070"	"13047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"777.9"	""	"722.9"	""	"822.4"	""	"838.5"	"2.2"	"892.4"	"958.1"	""	"691"	"53"	"35.000"	"28.000"	"0.000183420575481807"	"24"	"0"	"6.65E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAQDYGVLK"	"[R].tIAQDYGVLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"783.46814"	"1565.92900"	"1565.93031"	"-0.84"	"-0.00066"	"15/92"	"15"	"92"	"2480544.14660645"	"HCD"	"MS2"	"0"	"203.2"	"100.000"	"45.9796"	"13202"	"13202"	"13181"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"268.3"	""	"270.4"	""	"308.6"	""	"293.3"	"2.1"	"382.6"	"401.4"	""	"658"	"46"	"35.000"	"28.000"	"0.000904057176370689"	"21"	"0"	"7.965E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAQDYGVLK"	"[R].tIAQDYGVLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"783.46875"	"1565.93022"	"1565.93031"	"-0.06"	"-0.00005"	"16/92"	"16"	"92"	"4361441.18182373"	"HCD"	"MS2"	"0"	"344.2"	"100.000"	"46.1748"	"13330"	"13330"	"13312"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"506.9"	""	"459.0"	""	"529.9"	""	"510.8"	""	"605.6"	"647.3"	""	"648"	"53"	"35.000"	"28.000"	"0.000181779544234521"	"24"	"0"	"6.633E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVLPVLDLAQR"	"[R].aAAVLPVLDLAQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"522.65295"	"1565.94431"	"1565.95764"	"-8.51"	"-0.00444"	"14/98"	"14"	"98"	"2992656.10626221"	"HCD"	"MS2"	"7.1012"	"58.7"	"100.000"	"65.5805"	"21232"	"21232"	"21203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.7"	""	"80.0"	""	"91.5"	""	"95.9"	"0.2"	"108.2"	"106.8"	""	"562"	"22"	"34.000"	"27.000"	"0.161326725880259"	"15"	"0.000494"	"0.002738"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVLPVLDLAQR"	"[R].aAAVLPVLDLAQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.47675"	"1565.94621"	"1565.95764"	"-7.30"	"-0.00571"	"12/98"	"12"	"98"	"1439715.88702393"	"HCD"	"MS2"	"6.943107"	"93.1"	"100.000"	"65.6129"	"21245"	"21245"	"21219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.2"	""	"124.4"	""	"141.7"	""	"158.1"	"0.7"	"161.1"	"169.5"	""	"563"	"42"	"34.000"	"27.000"	"0.00173971616638964"	"15"	"0"	"0.0001042"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNVVPTFGK"	"[R].fVNVVPTFGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62864"	"40S ribosomal protein S30 OS=Rattus norvegicus OX=10116 GN=Fau PE=1 SV=1"	"P62864"	"40S ribosomal protein S30 OS=Rattus norvegicus OX=10116 GN=Fau PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"522.65393"	"1565.94724"	"1565.94557"	"1.07"	"0.00056"	"10/86"	"10"	"86"	"3555613.88012695"	"HCD"	"MS2"	"32.0104"	"101.9"	"100.000"	"62.7036"	"20004"	"20004"	"19977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.3"	""	"225.5"	""	"199.9"	""	"158.6"	""	"118.4"	"103.9"	""	"552"	"29"	"34.000"	"27.000"	"0.0377493155864454"	"14"	"0.0001889"	"0.0009928"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNVVPTFGK"	"[R].fVNVVPTFGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62864"	"40S ribosomal protein S30 OS=Rattus norvegicus OX=10116 GN=Fau PE=1 SV=1"	"P62864"	"40S ribosomal protein S30 OS=Rattus norvegicus OX=10116 GN=Fau PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"522.65393"	"1565.94724"	"1565.94557"	"1.07"	"0.00056"	"10/86"	"10"	"86"	"4106436.34906006"	"HCD"	"MS2"	"33.57242"	"115.4"	"100.000"	"62.7874"	"20091"	"20091"	"20067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.6"	""	"267.4"	""	"231.0"	""	"168.2"	""	"129.8"	"125.2"	""	"552"	"28"	"34.000"	"27.000"	"0.043342013399606"	"16"	"0.0001889"	"0.0007612"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNVVPTFGK"	"[R].fVNVVPTFGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62864"	"40S ribosomal protein S30 OS=Rattus norvegicus OX=10116 GN=Fau PE=1 SV=1"	"P62864"	"40S ribosomal protein S30 OS=Rattus norvegicus OX=10116 GN=Fau PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"783.47791"	"1565.94853"	"1565.94557"	"1.89"	"0.00148"	"9/86"	"9"	"86"	"2656995.36981201"	"HCD"	"MS2"	"38.18108"	"184.4"	"100.000"	"62.8221"	"20105"	"20105"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"283.6"	""	"401.7"	""	"378.9"	""	"257.6"	""	"207.9"	"206.3"	""	"537"	"42"	"34.000"	"27.000"	"0.00189210089017679"	"17"	"0.0001889"	"0.0007988"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNVVPTFGK"	"[R].fVNVVPTFGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62864"	"40S ribosomal protein S30 OS=Rattus norvegicus OX=10116 GN=Fau PE=1 SV=1"	"P62864"	"40S ribosomal protein S30 OS=Rattus norvegicus OX=10116 GN=Fau PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.47821"	"1565.94914"	"1565.94557"	"2.28"	"0.00179"	"8/86"	"8"	"86"	"2645778.3694458"	"HCD"	"MS2"	"41.32904"	"185.7"	"100.000"	"62.6921"	"19999"	"19999"	"19977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.9"	""	"418.9"	""	"374.0"	""	"253.8"	"0.5"	"216.1"	"198.8"	""	"527"	"44"	"34.000"	"27.000"	"0.000976743701897087"	"15"	"0.0001308"	"0.0002407"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVLPVLDLAQR"	"[R].aAAVLPVLDLAQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"522.65466"	"1565.94944"	"1565.95764"	"-5.24"	"-0.00274"	"13/98"	"13"	"98"	"2504204.5413208"	"HCD"	"MS2"	"10.01679"	"48.1"	"100.000"	"65.6900"	"21224"	"21224"	"21193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.2"	""	"60.5"	""	"73.5"	""	"72.9"	"0.7"	"86.5"	"95.8"	""	"527"	"22"	"34.000"	"27.000"	"0.18525955628939"	"15"	"0.0001859"	"0.0003445"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVLPVLDLAQR"	"[R].aAAVLPVLDLAQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.47852"	"1565.94975"	"1565.95764"	"-5.04"	"-0.00394"	"11/98"	"11"	"98"	"1404652.18792725"	"HCD"	"MS2"	"12.12405"	"90.8"	"100.000"	"65.6348"	"21201"	"21201"	"21177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.9"	""	"115.1"	""	"126.3"	""	"159.0"	""	"164.6"	"163.8"	""	"527"	"31"	"34.000"	"27.000"	"0.0208824100581604"	"14"	"0"	"0.0001735"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALMVYDITR"	"[R].gAAGALMVYDITR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"783.92859"	"1566.84990"	"1566.85113"	"-0.78"	"-0.00061"	"11/100"	"11"	"100"	"3048214.6986084"	"HCD"	"MS2"	"33.76451"	"231.0"	"100.000"	"54.4356"	"16630"	"16630"	"16609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.6"	""	"298.0"	""	"317.6"	""	"365.2"	""	"468.3"	"444.1"	""	"885"	"52"	"36.000"	"29.000"	"0.000300547607433104"	"19"	"0"	"2.449E-06"	"1.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALMVYDITR"	"[R].gAAGALMVYDITR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"783.92871"	"1566.85015"	"1566.85113"	"-0.63"	"-0.00049"	"9/100"	"9"	"100"	"2145884.13293457"	"HCD"	"MS2"	"14.68483"	"153.9"	"100.000"	"54.5937"	"16748"	"16748"	"16725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"190.4"	""	"204.1"	""	"218.4"	""	"222.6"	""	"305.0"	"328.5"	""	"906"	"48"	"36.000"	"29.000"	"0.000776422660301318"	"21"	"0"	"3.114E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITALDEFATK"	"[K].iTALDEFATk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"522.97583"	"1566.91294"	"1566.91433"	"-0.89"	"-0.00046"	"7/86"	"7"	"86"	"6286971.54901123"	"HCD"	"MS2"	"82.43628"	"195.6"	"100.000"	"57.9725"	"18130"	"18130"	"18101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.2"	""	"252.8"	""	"242.7"	""	"325.2"	""	"383.4"	"433.0"	""	"756"	"26"	"35.000"	"28.000"	"0.0938624313801725"	"16"	"0.0001889"	"0.0006341"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITALDEFATK"	"[K].iTALDEFATk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"783.96045"	"1566.91362"	"1566.91433"	"-0.45"	"-0.00035"	"9/86"	"9"	"86"	"3293601.96557617"	"HCD"	"MS2"	"0"	"289.1"	"100.000"	"57.7482"	"17984"	"17984"	"17963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"394.0"	""	"444.6"	""	"387.7"	""	"392.7"	""	"494.3"	"627.7"	""	"756"	"63"	"35.000"	"28.000"	"1.91642487727838E-05"	"22"	"0"	"2.444E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITCPPPPIPK"	"[R].iTcPPPPIPk.[F]"	"N-Term(TMT6plex); C3(Methylthio); K10(TMT6plex)"	"1"	"1"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"522.97614"	"1566.91385"	"1566.91520"	"-0.86"	"-0.00045"	"6/72"	"6"	"72"	"3526930.43261719"	"HCD"	"MS2"	"17.37619"	"109.3"	"100.000"	"57.5734"	"17913"	"17913"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.4"	""	"144.6"	""	"121.9"	""	"198.4"	"1.6"	"209.4"	"240.4"	""	"754"	"11"	"35.000"	"28.000"	"2.84015047527611"	"14"	"0.0001889"	"0.0007829"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITALDEFATK"	"[K].iTALDEFATk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"522.97620"	"1566.91404"	"1566.91433"	"-0.19"	"-0.00010"	"11/86"	"11"	"86"	"8973824.76782227"	"HCD"	"MS2"	"13.37919"	"219.6"	"100.000"	"57.8636"	"18031"	"18031"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.3"	""	"296.6"	""	"278.0"	""	"307.5"	""	"415.2"	"520.2"	""	"754"	"40"	"35.000"	"28.000"	"0.00367571093419455"	"18"	"7.476E-05"	"0.0002014"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITALDEFATK"	"[K].iTALDEFATk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"783.96075"	"1566.91423"	"1566.91433"	"-0.06"	"-0.00005"	"9/86"	"9"	"86"	"2122689.50390625"	"HCD"	"MS2"	"0"	"174.0"	"100.000"	"57.8987"	"18100"	"18100"	"18069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.3"	""	"259.3"	""	"222.9"	""	"247.2"	""	"312.8"	"380.7"	""	"750"	"61"	"35.000"	"28.000"	"2.79274490214746E-05"	"22"	"0"	"3.047E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSQNYGVLK"	"[K].sLSQNYGVLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"783.96576"	"1566.92424"	"1566.92556"	"-0.84"	"-0.00066"	"9/88"	"9"	"88"	"2805097.7880249"	"HCD"	"MS2"	"0"	"185.6"	"100.000"	"41.4511"	"11413"	"11413"	"11389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.3"	""	"265.5"	""	"267.7"	""	"340.0"	""	"293.7"	"296.8"	""	"702"	"25"	"35.000"	"28.000"	"0.11542692243747"	"17"	"0.0001889"	"0.0008468"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSQNYGVLK"	"[K].sLSQNYGVLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"783.96576"	"1566.92424"	"1566.92556"	"-0.84"	"-0.00066"	"9/88"	"9"	"88"	"3132864.38891602"	"HCD"	"MS2"	"0"	"264.0"	"100.000"	"41.2219"	"11275"	"11275"	"11253"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"446.4"	""	"360.5"	""	"408.2"	""	"425.5"	"5.1"	"435.6"	"413.5"	""	"702"	"55"	"35.000"	"28.000"	"0.000123682175735913"	"26"	"0.0001308"	"0.0003008"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSQNYGVLK"	"[K].sLSQNYGVLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.6744"	"0.0000"	"1"	"1"	"1"	"522.97961"	"1566.92429"	"1566.92556"	"-0.81"	"-0.00042"	"12/88"	"12"	"88"	"97535909.0048828"	"HCD"	"MS2"	"6.973565"	"342.9"	"12.138"	"41.0135"	"11190"	"11190"	"11173"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"532.0"	""	"480.0"	""	"516.9"	""	"556.9"	"9.8"	"585.8"	"562.3"	""	"702"	"43"	"35.000"	"28.000"	"0.0019024231253097"	""	"0.0003146"	"0.001455"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSQNYGVLK"	"[K].sLSQNYGVLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.7174"	"0.0000"	"1"	"1"	"1"	"522.97968"	"1566.92447"	"1566.92556"	"-0.70"	"-0.00036"	"12/88"	"12"	"88"	"93558564.1835938"	"HCD"	"MS2"	"7.318963"	"312.3"	"11.632"	"41.2036"	"11311"	"11311"	"11293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"497.4"	""	"446.5"	""	"485.9"	""	"486.1"	"8.6"	"520.8"	"508.0"	""	"702"	"46"	"35.000"	"28.000"	"0.000865579807369253"	""	"0.0001889"	"0.0004228"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSQNYGVLK"	"[K].sLSQNYGVLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7385"	"0.0000"	"1"	"1"	"1"	"783.96643"	"1566.92558"	"1566.92556"	"0.01"	"0.00001"	"18/88"	"18"	"88"	"12871081.5474243"	"HCD"	"MS2"	"6.62312"	"973.2"	"100.000"	"40.9146"	"11149"	"11149"	"11125"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1695.1"	""	"1386.6"	""	"1512.0"	""	"1617.9"	"13.3"	"1482.8"	"1482.8"	""	"683"	"65"	"35.000"	"28.000"	"1.0432555601631E-05"	""	"0.0001308"	"0.0002384"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSQNYGVLK"	"[K].sLSQNYGVLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7538"	"0.0000"	"1"	"1"	"1"	"783.96649"	"1566.92571"	"1566.92556"	"0.09"	"0.00007"	"18/88"	"18"	"88"	"11697275.9699707"	"HCD"	"MS2"	"0"	"858.6"	"100.000"	"41.0957"	"11267"	"11267"	"11245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1547.3"	""	"1234.5"	""	"1350.1"	""	"1408.2"	"6.7"	"1338.0"	"1221.7"	""	"685"	"65"	"35.000"	"28.000"	"9.85508957046966E-06"	""	"0.0001308"	"0.0002527"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVLPNFEVK"	"[K].yVLPNFEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"783.96777"	"1566.92827"	"1566.92959"	"-0.84"	"-0.00066"	"8/72"	"8"	"72"	"5114211.90014648"	"HCD"	"MS2"	"5.62811"	"314.3"	"100.000"	"60.1541"	"19016"	"19016"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"636.7"	""	"485.5"	""	"306.8"	""	"561.2"	"2.2"	"519.8"	"457.4"	""	"661"	"45"	"35.000"	"28.000"	"0.00117265825141697"	"18"	"0.0001308"	"0.0002108"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVLPNFEVK"	"[K].yVLPNFEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"783.96851"	"1566.92974"	"1566.92959"	"0.09"	"0.00007"	"8/72"	"8"	"72"	"5398494.01379395"	"HCD"	"MS2"	"7.291333"	"340.3"	"100.000"	"60.0183"	"18907"	"18907"	"18889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"688.5"	""	"536.4"	""	"353.2"	""	"608.3"	"1.6"	"528.0"	"497.4"	""	"664"	"44"	"35.000"	"28.000"	"0.00120541914183674"	"19"	"7.476E-05"	"0.0002009"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIWNTLNSGR"	"[R].dYIWNTLNSGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"784.40466"	"1567.80205"	"1567.80662"	"-2.92"	"-0.00229"	"9/108"	"9"	"108"	"1736885.58312988"	"HCD"	"MS2"	"0"	"114.3"	"100.000"	"53.2141"	"16146"	"16146"	"16138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.6"	""	"160.3"	""	"149.1"	""	"183.5"	""	"202.0"	"201.9"	""	"847"	"44"	"36.000"	"29.000"	"0.0018529061153452"	"22"	"0"	"0.0001681"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIWNTLNSGR"	"[R].dYIWNTLNSGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"784.40515"	"1567.80303"	"1567.80662"	"-2.29"	"-0.00180"	"15/108"	"15"	"108"	"1538555.75280762"	"HCD"	"MS2"	"0"	"103.5"	"100.000"	"53.3862"	"16268"	"16268"	"16258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.9"	""	"133.1"	""	"137.6"	""	"165.4"	""	"177.8"	"188.5"	""	"865"	"41"	"36.000"	"29.000"	"0.00378430482785866"	"25"	"0"	"0.0001178"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSIFWNDVK"	"[R].tSIFWNDVk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"784.44745"	"1567.88762"	"1567.88845"	"-0.53"	"-0.00041"	"13/82"	"13"	"82"	"973048.669677734"	"HCD"	"MS2"	"12.92159"	"102.4"	"100.000"	"55.6150"	"17113"	"17113"	"17083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.5"	""	"110.1"	""	"128.0"	""	"163.7"	""	"225.2"	"229.9"	""	"886"	"34"	"36.000"	"29.000"	"0.0162706059120652"	"20"	"0.0001308"	"0.0002615"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWMSSSLTLK"	"[R].gWMSSSLTLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"523.30151"	"1567.88999"	"1567.89182"	"-1.17"	"-0.00061"	"8/80"	"8"	"80"	"4069202.90283203"	"HCD"	"MS2"	"33.05794"	"125.4"	"100.000"	"56.0880"	"17360"	"17360"	"17333"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.5"	""	"168.9"	""	"162.2"	""	"188.6"	"2.2"	"253.5"	"282.9"	""	"921"	"34"	"36.000"	"29.000"	"0.0181647587605666"	"22"	"0"	"7.495E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWMSSSLTLK"	"[R].gWMSSSLTLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"784.44885"	"1567.89043"	"1567.89182"	"-0.89"	"-0.00070"	"9/80"	"9"	"80"	"3308531.15496826"	"HCD"	"MS2"	"0"	"300.8"	"100.000"	"56.1158"	"17371"	"17371"	"17349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.2"	""	"417.2"	""	"410.2"	""	"407.0"	""	"669.2"	"676.5"	""	"907"	"61"	"36.000"	"29.000"	"3.50410645340901E-05"	"26"	"0"	"2.989E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWMSSSLTLK"	"[R].gWMSSSLTLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"523.30194"	"1567.89127"	"1567.89182"	"-0.35"	"-0.00018"	"8/80"	"8"	"80"	"4039258.36700439"	"HCD"	"MS2"	"23.61893"	"122.1"	"100.000"	"55.8865"	"17224"	"17224"	"17195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.5"	""	"162.5"	""	"160.2"	""	"169.0"	""	"269.0"	"278.8"	""	"899"	"36"	"36.000"	"29.000"	"0.0112132032976086"	"24"	"0"	"5.252E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWMSSSLTLK"	"[R].gWMSSSLTLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"784.44940"	"1567.89153"	"1567.89182"	"-0.19"	"-0.00015"	"9/80"	"9"	"80"	"3239764.65435791"	"HCD"	"MS2"	"0"	"300.8"	"100.000"	"55.9466"	"17248"	"17248"	"17227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.3"	""	"411.1"	""	"392.8"	""	"409.6"	"2.0"	"663.7"	"715.9"	""	"897"	"63"	"36.000"	"29.000"	"2.05476636191468E-05"	"29"	"0"	"3.049E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAFTGSTEVGK"	"[K].iAFTGSTEVGk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q63639; Q8K4D8"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q63639; Q8K4D8"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"784.45911"	"1567.91094"	"1567.90958"	"0.87"	"0.00068"	"10/88"	"10"	"88"	"1309816.11279297"	"HCD"	"MS2"	"24.79229"	"128.9"	"100.000"	"42.6088"	"11884"	"11884"	"11859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.6"	""	"197.4"	""	"211.0"	""	"177.5"	"2.8"	"226.7"	"219.9"	""	"760"	"47"	"35.000"	"28.000"	"0.000810557066995699"	"26"	"0"	"9.661E-06"	"1.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVEDMMK"	"[K].kVEDMMk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"784.46045"	"1567.91362"	"1567.91548"	"-1.19"	"-0.00093"	"12/62"	"12"	"62"	"866016.097045898"	"HCD"	"MS2"	"0"	"88.6"	"100.000"	"34.1618"	"8382"	"8382"	"8361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.3"	""	"122.8"	""	"144.1"	""	"109.3"	""	"151.6"	"170.9"	""	"750"	"25"	"35.000"	"28.000"	"0.108400495588705"	""	"0.0005564"	"0.003322"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVEDMMK"	"[K].kVEDMMk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"523.30945"	"1567.91379"	"1567.91548"	"-1.08"	"-0.00056"	"6/62"	"6"	"62"	"46609428.260498"	"HCD"	"MS2"	"12.26865"	"657.1"	"21.202"	"34.1962"	"8439"	"8439"	"8428"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1087.5"	""	"927.4"	""	"1031.0"	""	"797.3"	"4.7"	"1189.2"	"1182.6"	""	"750"	"13"	"35.000"	"28.000"	"1.84940176483101"	"19"	"0.0008125"	"0.007693"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVEDMMK"	"[K].kVEDMMk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"523.30963"	"1567.91434"	"1567.91548"	"-0.73"	"-0.00038"	"8/62"	"8"	"62"	"35255283.953125"	"HCD"	"MS2"	"12.21432"	"1217.7"	"50.876"	"34.1458"	"8375"	"8375"	"8361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2042.7"	""	"1735.4"	""	"1856.1"	""	"1456.9"	"10.2"	"2179.3"	"2244.8"	""	"727"	"13"	"35.000"	"28.000"	"1.85996347218902"	"21"	"0.0007076"	"0.007048"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVEDMMK"	"[K].kVEDMMk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"784.46088"	"1567.91448"	"1567.91548"	"-0.64"	"-0.00050"	"12/62"	"12"	"62"	"1029919.72058105"	"HCD"	"MS2"	"0"	"98.3"	"100.000"	"34.1781"	"8432"	"8432"	"8418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.0"	""	"144.2"	""	"154.7"	""	"108.9"	"2.5"	"167.0"	"184.4"	""	"727"	"24"	"35.000"	"28.000"	"0.129271984299826"	""	"0.0006037"	"0.00502"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPLALVQAIER"	"[K].iDPLALVqAIER.[Y]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"F1LP64"	"E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1"	"F1LP64"	"E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"523.30969"	"1567.91452"	"1567.92567"	"-7.11"	"-0.00372"	"4/114"	"4"	"114"	"382392.319885254"	"HCD"	"MS2"	"18.45424"	"4.8"	"100.000"	"87.7185"	"30172"	"30172"	"30159"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.7"	""	"4.6"	""	"5.3"	""	"9.9"	""	"8.7"	"10.0"	""	"727"	"7"	"35.000"	"28.000"	"6.79992958022968"	"17"	"0.007595"	"0.2978"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIYELLFK"	"[R].iAIYELLFk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"784.49652"	"1567.98577"	"1567.98637"	"-0.39"	"-0.00030"	"14/64"	"14"	"64"	"267376.548400879"	"HCD"	"MS2"	"22.8221"	"22.6"	"100.000"	"89.3785"	"30839"	"30839"	"30828"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.0"	""	"36.8"	""	"35.4"	""	"40.7"	""	"40.1"	"34.8"	""	"241"	"45"	"30.000"	"23.000"	"0.000352360361530122"	"16"	"0"	"7.207E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFFALAHTVR"	"[R].dYFFALAHTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"523.61798"	"1568.83939"	"1568.84228"	"-1.84"	"-0.00096"	"6/96"	"6"	"96"	"9789148.07324219"	"HCD"	"MS2"	"27.61901"	"163.5"	"100.000"	"52.7169"	"15949"	"15949"	"15922"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.5"	""	"248.6"	""	"210.0"	""	"277.8"	"0.5"	"297.9"	"268.8"	""	"852"	"37"	"36.000"	"29.000"	"0.00857846530441378"	"15"	"0"	"4.765E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDELAQMLK"	"[R].yDELAQMLk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"784.93915"	"1568.87102"	"1568.87584"	"-3.07"	"-0.00241"	"16/72"	"16"	"72"	"1773336.80529785"	"HCD"	"MS2"	"0"	"166.0"	"100.000"	"63.8856"	"20487"	"20487"	"20457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"325.0"	"3.2"	"209.2"	""	"254.6"	""	"197.7"	""	"298.8"	"281.4"	""	"833"	"49"	"36.000"	"29.000"	"0.000586968784542711"	"21"	"0"	"0.000104"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDELAQMLK"	"[R].yDELAQMLk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"784.94073"	"1568.87419"	"1568.87584"	"-1.05"	"-0.00082"	"8/72"	"8"	"72"	"1375520.77813721"	"HCD"	"MS2"	"0"	"126.5"	"100.000"	"64.0361"	"20601"	"20601"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.5"	""	"150.3"	""	"188.2"	""	"140.1"	"3.1"	"247.7"	"230.8"	""	"844"	"47"	"36.000"	"29.000"	"0.000826632452219528"	"26"	"0"	"9.301E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQLYMNQK"	"[K].vSQLYMNQk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.94769"	"1568.88811"	"1568.88707"	"0.66"	"0.00052"	"10/76"	"10"	"76"	"1324158.89642334"	"HCD"	"MS2"	"70.87091"	"103.0"	"100.000"	"38.9928"	"10364"	"10364"	"10342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.0"	""	"170.9"	""	"165.8"	""	"114.7"	""	"174.8"	"165.8"	""	"815"	"3"	"36.000"	"29.000"	"22.5490169505413"	"13"	"0.001966"	"0.02841"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQLLLDGPWR"	"[K].lEQLLLDGPWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"784.95245"	"1568.89763"	"1568.89979"	"-1.38"	"-0.00108"	"6/106"	"6"	"106"	"308056.513977051"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"82.5688"	"28093"	"28093"	"28064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.0"	""	"28.0"	""	"20.5"	""	"34.5"	""	"38.4"	"37.5"	""	"771"	"37"	"35.000"	"28.000"	"0.00762121796263123"	"24"	"0.0001889"	"0.0006316"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQLLLDGPWR"	"[K].lEQLLLDGPWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"784.95270"	"1568.89812"	"1568.89979"	"-1.07"	"-0.00084"	"7/106"	"7"	"106"	"291682.206420898"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"82.6191"	"28164"	"28164"	"28141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.4"	""	"23.5"	""	"20.1"	""	"31.6"	""	"36.0"	"39.9"	""	"757"	"54"	"35.000"	"28.000"	"0.000150683564054499"	"24"	"0.0001308"	"0.0002369"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFLSAGLIDK"	"[R].fFLSAGLIDk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"784.97443"	"1568.94158"	"1568.94524"	"-2.33"	"-0.00183"	"7/82"	"7"	"82"	"493000.350036621"	"HCD"	"MS2"	"56.46123"	"37.9"	"100.000"	"73.2215"	"24342"	"24342"	"24319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.8"	""	"43.1"	""	"48.2"	""	"72.4"	""	"76.4"	"82.2"	""	"507"	"20"	"34.000"	"27.000"	"0.249446815310447"	"18"	"0.0006396"	"0.006396"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLLGDQIPK"	"[R].qVLLGDQIPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"784.99194"	"1568.97661"	"1568.97760"	"-0.63"	"-0.00049"	"8/90"	"8"	"90"	"1137153.85974121"	"HCD"	"MS2"	"27.24051"	"91.8"	"100.000"	"46.9165"	"13586"	"13586"	"13560"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.5"	""	"86.9"	""	"100.5"	""	"104.3"	""	"122.8"	"354.0"	""	"288"	"42"	"31.000"	"24.000"	"0.00101709727813867"	"23"	"0"	"0.000128"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLLGDQIPK"	"[R].qVLLGDQIPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"784.99243"	"1568.97759"	"1568.97760"	"-0.01"	"-0.00001"	"6/90"	"6"	"90"	"1916815.94781494"	"HCD"	"MS2"	"15.17175"	"139.8"	"100.000"	"47.1321"	"13722"	"13722"	"13698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.8"	""	"134.7"	""	"157.1"	""	"171.9"	""	"194.2"	"504.0"	""	"284"	"36"	"31.000"	"24.000"	"0.00321579491678214"	"24"	"0"	"6.469E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSFLQFDPAPR"	"[K].ySFLQFDPAPR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"785.41589"	"1569.82451"	"1569.82629"	"-1.14"	"-0.00089"	"10/102"	"10"	"102"	"2966054.98175049"	"HCD"	"MS2"	"17.88062"	"126.3"	"100.000"	"61.5604"	"19590"	"19590"	"19571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.3"	""	"173.7"	""	"192.0"	""	"192.2"	"1.1"	"227.1"	"212.6"	""	"773"	"57"	"35.000"	"28.000"	"7.36460567492795E-05"	"25"	"0"	"1.39E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSFLQFDPAPR"	"[K].ySFLQFDPAPR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"523.94641"	"1569.82468"	"1569.82629"	"-1.03"	"-0.00054"	"13/102"	"13"	"102"	"5127119.80206299"	"HCD"	"MS2"	"12.81772"	"59.9"	"100.000"	"61.6575"	"19630"	"19630"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.3"	""	"90.6"	""	"89.0"	""	"93.4"	"0.6"	"109.6"	"99.4"	""	"773"	"45"	"35.000"	"28.000"	"0.00132785146863302"	"19"	"7.476E-05"	"0.0002005"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSFLQFDPAPR"	"[K].ySFLQFDPAPR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"523.94696"	"1569.82633"	"1569.82629"	"0.02"	"0.00001"	"11/102"	"11"	"102"	"5287011.68139648"	"HCD"	"MS2"	"10.5364"	"57.5"	"100.000"	"61.5426"	"19530"	"19530"	"19513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.8"	""	"82.6"	""	"81.8"	""	"88.2"	""	"102.3"	"112.7"	""	"778"	"55"	"35.000"	"28.000"	"0.000121045765513424"	""	"0"	"0.0001374"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSFLQFDPAPR"	"[K].ySFLQFDPAPR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"785.41699"	"1569.82671"	"1569.82629"	"0.26"	"0.00021"	"8/102"	"8"	"102"	"3364417.91192627"	"HCD"	"MS2"	"2.084982"	"153.7"	"100.000"	"61.6993"	"19594"	"19594"	"19577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.6"	""	"223.3"	""	"230.0"	""	"222.5"	"2.9"	"259.4"	"285.1"	""	"777"	"46"	"35.000"	"28.000"	"0.0010724844971416"	"23"	"0.0001889"	"0.0004013"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSFLQFDPAPR"	"[K].ySFLQFDPAPR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"785.41730"	"1569.82732"	"1569.82629"	"0.65"	"0.00051"	"9/102"	"9"	"102"	"3271428.93664551"	"HCD"	"MS2"	"18.26068"	"142.6"	"100.000"	"61.4134"	"19477"	"19477"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.8"	""	"219.8"	""	"218.4"	""	"216.1"	""	"244.6"	"237.4"	""	"788"	"46"	"35.000"	"28.000"	"0.00102919157363329"	"26"	"0"	"2.545E-05"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSFLQFDPAPR"	"[K].ySFLQFDPAPR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.41742"	"1569.82756"	"1569.82629"	"0.81"	"0.00063"	"7/102"	"7"	"102"	"2750875.28344727"	"HCD"	"MS2"	"7.906399"	"120.9"	"100.000"	"61.8675"	"19716"	"19716"	"19699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.9"	""	"166.3"	""	"184.9"	""	"154.4"	"1.7"	"212.8"	"229.3"	""	"788"	"49"	"35.000"	"28.000"	"0.000470431313158924"	"16"	"0"	"7.967E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLQGLSHFLR"	"[R].aAQLQGLSHFLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"523.97369"	"1569.90653"	"1569.90628"	"0.16"	"0.00008"	"14/106"	"14"	"106"	"6895952.3996582"	"HCD"	"MS2"	"22.51432"	"175.4"	"100.000"	"47.9838"	"14070"	"14070"	"14050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.6"	""	"249.5"	""	"248.6"	""	"261.2"	"1.1"	"321.3"	"333.1"	""	"728"	"25"	"35.000"	"28.000"	"0.118059620715163"	"14"	"0"	"6.234E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLQGLSHFLR"	"[R].aAQLQGLSHFLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"523.97394"	"1569.90726"	"1569.90628"	"0.63"	"0.00033"	"15/106"	"15"	"106"	"5322992.38049316"	"HCD"	"MS2"	"17.28025"	"134.5"	"100.000"	"47.7406"	"13923"	"13923"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.8"	""	"186.3"	""	"200.3"	""	"205.8"	"1.7"	"254.5"	"249.6"	""	"741"	"40"	"35.000"	"28.000"	"0.00334802130014113"	"16"	"0"	"1.587E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YKAEDEK"	"[K].ykAEDEk.[Q]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"523.97400"	"1569.90744"	"1569.90913"	"-1.08"	"-0.00056"	"4/62"	"4"	"62"	"5945607.97711182"	"HCD"	"MS2"	"7.165074"	"378.7"	"100.000"	"26.2703"	"5213"	"5213"	"5192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"676.4"	""	"388.8"	""	"432.6"	""	"592.0"	"4.6"	"738.8"	"757.2"	""	"731"	"10"	"35.000"	"28.000"	"3.43468870011375"	"15"	"0.001817"	"0.02516"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YKAEDEK"	"[K].ykAEDEk.[Q]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"523.97424"	"1569.90818"	"1569.90913"	"-0.61"	"-0.00032"	"4/62"	"4"	"62"	"4787655.68774414"	"HCD"	"MS2"	"4.239945"	"305.9"	"100.000"	"26.4069"	"5305"	"5305"	"5286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"538.9"	""	"320.4"	""	"347.4"	""	"478.3"	"0.3"	"612.0"	"602.9"	""	"728"	"8"	"35.000"	"28.000"	"6.22445574692864"	"13"	"0.00109"	"0.0147"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLTSQQLFK"	"[R].fLTSQQLFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.47290"	"1569.93852"	"1569.94049"	"-1.25"	"-0.00098"	"8/74"	"8"	"74"	"903282.515930176"	"HCD"	"MS2"	"15.19886"	"84.9"	"100.000"	"59.2567"	"18596"	"18596"	"18569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.0"	""	"111.6"	""	"125.9"	""	"142.1"	""	"140.5"	"163.0"	""	"534"	"20"	"34.000"	"27.000"	"0.28543765275245"	"14"	"0.0001308"	"0.0002856"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLTSQQLFK"	"[R].fLTSQQLFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"D4A631"	"Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus OX=10116 GN=Arfgef1 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"785.47363"	"1569.93999"	"1569.94049"	"-0.32"	"-0.00025"	"7/74"	"7"	"74"	"1055367.92791748"	"HCD"	"MS2"	"5.869019"	"72.4"	"100.000"	"59.4985"	"18748"	"18748"	"18725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.8"	""	"115.6"	""	"112.5"	""	"99.8"	"2.8"	"121.1"	"121.6"	""	"512"	"18"	"34.000"	"27.000"	"0.448993408471491"	"19"	"0.0001889"	"0.0006098"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSILPFTPPIVK"	"[M].sSILPFTPPIVk.[R]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P84025"	"Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus OX=10116 GN=Smad3 PE=1 SV=1"	"P84025"	"Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus OX=10116 GN=Smad3 PE=1 SV=1"	"0"	"2"	"2"	"0.3721"	"0.0000"	"1"	"1"	"1"	"785.47540"	"1569.94353"	"1569.94535"	"-1.16"	"-0.00091"	"7/100"	"7"	"100"	"224439.253417969"	"HCD"	"MS2"	"37.74092"	"9.7"	"100.000"	"86.8005"	"29861"	"29861"	"29830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.7"	""	"12.2"	""	"17.7"	""	"19.4"	""	"18.5"	"15.2"	""	"503"	"43"	"34.000"	"27.000"	"0.00118723854877793"	""	"0.0006037"	"0.004729"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSILPFTPPIVK"	"[M].sSILPFTPPIVk.[R]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P84025"	"Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus OX=10116 GN=Smad3 PE=1 SV=1"	"P84025"	"Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus OX=10116 GN=Smad3 PE=1 SV=1"	"0"	"2"	"2"	"0.2286"	"0.0000"	"1"	"1"	"1"	"785.47583"	"1569.94438"	"1569.94535"	"-0.61"	"-0.00048"	"6/100"	"6"	"100"	"306698.500793457"	"HCD"	"MS2"	"37.2379"	"16.1"	"100.000"	"86.7860"	"29803"	"29803"	"29777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.1"	""	"20.0"	""	"25.6"	""	"31.0"	""	"25.0"	"29.4"	""	"500"	"35"	"33.000"	"26.000"	"0.00772573858128397"	""	"0.000523"	"0.003224"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILNKPGLK"	"[RK].iLNkPGLk.[YH]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"3"	"4"	"P23457; P07943"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1;Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P23457; P51652; Q6AYQ2; P07943"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1; Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus OX=10116 GN=Akr1c21 PE=2 SV=1; Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"524.02612"	"1570.06382"	"1570.06591"	"-1.33"	"-0.00070"	"6/68"	"6"	"68"	"95714000.6333008"	"HCD"	"MS2"	"20.9905"	"1349.2"	"25.718"	"37.9721"	"9988"	"9988"	"9969"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2004.6"	""	"2017.2"	""	"2081.5"	""	"1976.9"	""	"2246.3"	"2439.4"	""	"69"	"1"	"25.000"	"18.000"	"2.76578931868749"	"13"	"0.001217"	"0.017"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNKPGLK"	"[RK].lLNkPGLk.[YH]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"524.02612"	"1570.06382"	"1570.06591"	"-1.33"	"-0.00070"	"6/68"	"6"	"68"	"95714000.6333008"	"HCD"	"MS2"	"20.9905"	"1349.2"	"25.718"	"37.9721"	"9988"	"9988"	"9969"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2004.6"	""	"2017.2"	""	"2081.5"	""	"1976.9"	""	"2246.3"	"2439.4"	""	"69"	"1"	"25.000"	"18.000"	"2.76578931868749"	"13"	"0.001217"	"0.017"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILNKPGLK"	"[RK].iLNkPGLk.[YH]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"3"	"4"	"P23457; P07943"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1;Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P23457; P51652; Q6AYQ2; P07943"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1; Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus OX=10116 GN=Akr1c21 PE=2 SV=1; Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"524.02612"	"1570.06382"	"1570.06591"	"-1.33"	"-0.00070"	"6/68"	"6"	"68"	"20434057.6026611"	"HCD"	"MS2"	"42.33877"	"929.3"	"77.786"	"38.4647"	"10191"	"10191"	"10161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1329.4"	""	"1386.4"	""	"1349.9"	""	"1405.9"	""	"1509.3"	"1823.8"	""	"69"	"1"	"25.000"	"18.000"	"2.4763903048862"	"13"	"0.00109"	"0.01481"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNKPGLK"	"[RK].lLNkPGLk.[YH]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"524.02612"	"1570.06382"	"1570.06591"	"-1.33"	"-0.00070"	"6/68"	"6"	"68"	"20434057.6026611"	"HCD"	"MS2"	"42.33877"	"929.3"	"77.786"	"38.4647"	"10191"	"10191"	"10161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1329.4"	""	"1386.4"	""	"1349.9"	""	"1405.9"	""	"1509.3"	"1823.8"	""	"69"	"1"	"25.000"	"18.000"	"2.4763903048862"	"13"	"0.00109"	"0.01481"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILNKPGLK"	"[RK].iLNkPGLk.[YH]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"3"	"4"	"P23457; P07943"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1;Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P23457; P51652; Q6AYQ2; P07943"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1; Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus OX=10116 GN=Akr1c21 PE=2 SV=1; Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"524.02649"	"1570.06491"	"1570.06591"	"-0.63"	"-0.00033"	"6/68"	"6"	"68"	"140932275.535156"	"HCD"	"MS2"	"13.4054"	"1196.6"	"14.342"	"37.8950"	"9913"	"9913"	"9895"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1733.7"	""	"1808.1"	""	"1842.8"	""	"1738.9"	""	"2026.9"	"2184.8"	""	"69"	"2"	"25.000"	"18.000"	"2.0221766675734"	"13"	"0.0006037"	"0.006131"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNKPGLK"	"[RK].lLNkPGLk.[YH]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"524.02649"	"1570.06491"	"1570.06591"	"-0.63"	"-0.00033"	"6/68"	"6"	"68"	"140932275.535156"	"HCD"	"MS2"	"13.4054"	"1196.6"	"14.342"	"37.8950"	"9913"	"9913"	"9895"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1733.7"	""	"1808.1"	""	"1842.8"	""	"1738.9"	""	"2026.9"	"2184.8"	""	"69"	"2"	"25.000"	"18.000"	"2.0221766675734"	"13"	"0.0006037"	"0.006131"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YITDWQNVFR"	"[K].yITDWQNVFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"785.91412"	"1570.82097"	"1570.82154"	"-0.36"	"-0.00029"	"8/82"	"8"	"82"	"3033434.86462402"	"HCD"	"MS2"	"7.077312"	"167.7"	"100.000"	"67.8308"	"22141"	"22141"	"22122"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.8"	""	"225.8"	""	"250.7"	""	"261.7"	"1.8"	"289.5"	"323.7"	""	"771"	"47"	"35.000"	"28.000"	"0.000721147965111016"	"17"	"0"	"7.217E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YITDWQNVFR"	"[K].yITDWQNVFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"785.91443"	"1570.82158"	"1570.82154"	"0.02"	"0.00002"	"9/82"	"9"	"82"	"2742158.95544434"	"HCD"	"MS2"	"18.54617"	"162.0"	"100.000"	"67.9175"	"22125"	"22125"	"22106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.4"	""	"244.3"	""	"239.7"	""	"263.5"	""	"254.1"	"305.4"	""	"783"	"60"	"35.000"	"28.000"	"4.09950826561927E-05"	"18"	"0"	"6.638E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMLMQFVTK"	"[R].dMLMQFVTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"785.93890"	"1570.87053"	"1570.87373"	"-2.04"	"-0.00160"	"8/86"	"8"	"86"	"993174.942993164"	"HCD"	"MS2"	"12.56813"	"91.9"	"100.000"	"66.4277"	"21525"	"21525"	"21497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.1"	""	"123.1"	""	"125.4"	""	"153.7"	"2.5"	"163.1"	"167.1"	""	"902"	"23"	"36.000"	"29.000"	"0.232903782541704"	"22"	"0.0001308"	"0.0002324"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMLMQFVTK"	"[R].dMLMQFVTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"3"	"785.94446"	"1570.88164"	"1570.87373"	"5.04"	"0.00396"	"7/86"	"7"	"86"	"1567872.99206543"	"HCD"	"MS2"	"23.78278"	"131.6"	"100.000"	"66.3992"	"21566"	"21566"	"21539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.9"	""	"174.8"	""	"168.2"	""	"240.8"	""	"234.3"	"230.9"	""	"861"	"13"	"36.000"	"29.000"	"2.34408392048663"	"20"	"0.0009727"	"0.01043"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEAYVLNIIR"	"[K].sYEAYVLnIIR.[F]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P07340"	"Sodium/potassium-transporting ATPase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Atp1b1 PE=1 SV=1"	"P07340"	"Sodium/potassium-transporting ATPase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Atp1b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.94598"	"1570.88469"	"1570.86783"	"10.74"	"0.00843"	"7/90"	"7"	"90"	"420795.647644043"	"HCD"	"MS2"	"34.43089"	"35.0"	"100.000"	"69.5780"	"22855"	"22855"	"22826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.1"	""	"46.2"	""	"52.5"	""	"59.5"	""	"62.0"	"70.5"	""	"854"	"18"	"36.000"	"29.000"	"0.66134469627563"	"14"	"0.008648"	"0.3718"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNPFTPLVGIR"	"[K].dLNPFTPLVGIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q499R4"	"YrdC domain-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Yrdc PE=2 SV=1"	"Q499R4"	"YrdC domain-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Yrdc PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"785.96234"	"1570.91741"	"1570.91544"	"1.25"	"0.00098"	"7/116"	"7"	"116"	"476421.195617676"	"HCD"	"MS2"	"0"	"35.2"	"100.000"	"69.8921"	"22983"	"22983"	"22959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.9"	""	"41.9"	""	"44.3"	""	"63.3"	"0.3"	"65.9"	"76.7"	""	"750"	"35"	"35.000"	"28.000"	"0.0125901605341108"	"22"	"0.0001889"	"0.0008699"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTHTLLLAGVFR"	"[K].nTHTLLLAGVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"524.31335"	"1570.92551"	"1570.92668"	"-0.74"	"-0.00039"	"6/114"	"6"	"114"	"3198514.33032227"	"HCD"	"MS2"	"9.91267"	"63.0"	"100.000"	"46.5185"	"13423"	"13423"	"13400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.9"	""	"80.1"	""	"95.0"	""	"126.2"	"0.2"	"114.2"	"104.3"	""	"671"	"28"	"35.000"	"28.000"	"0.0500832524413753"	"16"	"0.0001889"	"0.0005739"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTHTLLLAGVFR"	"[K].nTHTLLLAGVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"524.31390"	"1570.92716"	"1570.92668"	"0.31"	"0.00016"	"6/114"	"6"	"114"	"4549843.08831787"	"HCD"	"MS2"	"23.31263"	"89.3"	"100.000"	"46.7895"	"13582"	"13582"	"13554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.8"	""	"120.6"	""	"119.5"	""	"178.3"	""	"146.0"	"152.9"	""	"644"	"26"	"35.000"	"28.000"	"0.0784975083514738"	"14"	"0.0001308"	"0.0002944"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWVINPLGEK"	"[R].gWVINPLGEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23347"	"Anion exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Slc4a2 PE=1 SV=1"	"P23347"	"Anion exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Slc4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"785.97070"	"1570.93413"	"1570.93573"	"-1.02"	"-0.00080"	"9/82"	"9"	"82"	"1018501.62359619"	"HCD"	"MS2"	"37.68773"	"81.8"	"100.000"	"60.6941"	"19183"	"19183"	"19161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.6"	""	"97.2"	""	"107.1"	""	"144.8"	""	"169.6"	"175.1"	""	"583"	"37"	"34.000"	"27.000"	"0.00611840976076257"	"20"	"0"	"0.0001219"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWVINPLGEK"	"[R].gWVINPLGEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23347"	"Anion exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Slc4a2 PE=1 SV=1"	"P23347"	"Anion exchange protein 2 OS=Rattus norvegicus OX=10116 GN=Slc4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"785.97156"	"1570.93584"	"1570.93573"	"0.07"	"0.00005"	"14/82"	"14"	"82"	"772376.819885254"	"HCD"	"MS2"	"0"	"69.6"	"100.000"	"60.9198"	"19329"	"19329"	"19299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.6"	""	"82.1"	""	"92.5"	""	"115.0"	"0.1"	"143.9"	"149.1"	""	"570"	"46"	"34.000"	"27.000"	"0.000720849928987151"	"24"	"0"	"7.69E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIQAFRPDR"	"[R].lLLIQAFRPDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"3"	"524.32544"	"1570.96177"	"1570.96306"	"-0.83"	"-0.00043"	"3/92"	"3"	"92"	"4274018.42785645"	"HCD"	"MS2"	"66.34107"	"126.3"	"100.000"	"58.8684"	"18439"	"18439"	"18409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.2"	""	"172.2"	""	"217.8"	""	"212.0"	"0.9"	"205.4"	"243.3"	""	"435"	"6"	"33.000"	"26.000"	"5.46335298853334"	"18"	"0.0002723"	"0.001364"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLIQAFRPDR"	"[R].lLLIQAFRPDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"524.32562"	"1570.96231"	"1570.96306"	"-0.48"	"-0.00025"	"8/92"	"8"	"92"	"5020544.59777832"	"HCD"	"MS2"	"26.73699"	"139.5"	"100.000"	"59.0718"	"18574"	"18574"	"18549"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.3"	""	"180.1"	""	"227.2"	""	"244.6"	"0.8"	"241.0"	"255.7"	""	"457"	"14"	"33.000"	"26.000"	"0.928723007142512"	"24"	"0"	"0.0001144"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIGVQNLLK"	"[K].dLIGVQNLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.4474"	"0.0000"	"1"	"1"	"1"	"524.33533"	"1570.99143"	"1570.99325"	"-1.16"	"-0.00061"	"7/80"	"7"	"80"	"3926992.69256592"	"HCD"	"MS2"	"72.72211"	"111.5"	"100.000"	"65.0605"	"20967"	"20967"	"20937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.7"	""	"126.1"	""	"129.6"	""	"170.1"	""	"238.0"	"287.9"	""	"268"	"38"	"31.000"	"24.000"	"0.00225478324183443"	""	"0.0001308"	"0.0002474"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLLQNLIK"	"[K].gVDLLQNLIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q1AAU6"	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Asap1 PE=1 SV=2"	"Q1AAU6"	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Asap1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"785.99957"	"1570.99187"	"1570.99325"	"-0.88"	"-0.00069"	"9/80"	"9"	"80"	"928896.80670166"	"HCD"	"MS2"	"0"	"73.8"	"100.000"	"71.2250"	"23527"	"23527"	"23498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.3"	""	"92.5"	""	"100.5"	""	"126.3"	"2.8"	"127.3"	"146.5"	""	"272"	"63"	"31.000"	"24.000"	"7.61270338033349E-06"	""	"0"	"3.272E-05"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLLQNLIK"	"[K].gVDLLQNLIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q1AAU6"	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Asap1 PE=1 SV=2"	"Q1AAU6"	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Asap1 PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"785.99969"	"1570.99211"	"1570.99325"	"-0.72"	"-0.00057"	"9/80"	"9"	"80"	"832431.218078613"	"HCD"	"MS2"	"16.07142"	"67.5"	"100.000"	"71.2865"	"23500"	"23500"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.2"	""	"93.0"	""	"79.8"	""	"103.2"	"0.4"	"125.0"	"131.5"	""	"272"	"62"	"31.000"	"24.000"	"9.17358117669174E-06"	""	"0"	"2.57E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKNVQGIIDILK"	"[K].TKNVQGIIDILk.[I]"	"K12(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"1"	"2"	"2"	"0.1765"	"0.0000"	"1"	"1"	"1"	"785.99982"	"1570.99236"	"1570.97296"	"12.35"	"0.00970"	"14/124"	"14"	"124"	"891995.578735352"	"HCD"	"MS2"	"9.754608"	"53.8"	"100.000"	"70.1294"	"23080"	"23080"	"23050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.8"	""	"68.1"	""	"67.0"	""	"86.5"	"3.4"	"92.6"	"99.6"	""	"270"	"51"	"31.000"	"24.000"	"9.69022293216339E-05"	"22"	"0.001488"	"0.0204"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIGVQNLLK"	"[K].dLIGVQNLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6515"	"0.0000"	"1"	"1"	"1"	"785.99994"	"1570.99260"	"1570.99325"	"-0.41"	"-0.00032"	"9/80"	"9"	"80"	"8199743.74554443"	"HCD"	"MS2"	"37.24047"	"495.7"	"100.000"	"65.0802"	"21028"	"21028"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"582.5"	""	"599.9"	""	"559.4"	""	"693.4"	""	"987.6"	"1291.4"	""	"270"	"66"	"31.000"	"24.000"	"3.78733541123482E-06"	""	"0"	"6.844E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKNVQGIIDILK"	"[K].TKNVQGIIDILk.[I]"	"K12(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"1"	"2"	"2"	"0.2097"	"0.0000"	"1"	"1"	"1"	"786.00043"	"1570.99358"	"1570.97296"	"13.13"	"0.01031"	"10/124"	"10"	"124"	"637533.222900391"	"HCD"	"MS2"	"34.48714"	"52.2"	"100.000"	"70.1911"	"23053"	"23053"	"23027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.3"	""	"68.1"	""	"63.6"	""	"79.3"	""	"96.4"	"110.4"	""	"271"	"62"	"31.000"	"24.000"	"8.82956473952442E-06"	""	"0.001217"	"0.01667"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIGVQNLLK"	"[K].dLIGVQNLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6034"	"0.0000"	"1"	"1"	"1"	"786.00067"	"1570.99407"	"1570.99325"	"0.52"	"0.00041"	"9/80"	"9"	"80"	"6764156.49926758"	"HCD"	"MS2"	"30.39306"	"428.2"	"100.000"	"65.1852"	"21018"	"21018"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"501.2"	""	"500.9"	""	"471.6"	""	"594.8"	""	"875.9"	"1132.5"	""	"271"	"58"	"31.000"	"24.000"	"2.09864651862641E-05"	""	"0"	"5.439E-05"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KISDYMK"	"[K].kISDYMk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"1"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"524.65234"	"1571.94248"	"1571.94341"	"-0.59"	"-0.00031"	"6/62"	"6"	"62"	"40429826.9560547"	"HCD"	"MS2"	"20.35504"	"568.1"	"21.672"	"35.7285"	"9067"	"9067"	"9049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"968.4"	""	"987.0"	""	"1034.3"	""	"520.3"	""	"857.7"	"998.7"	""	"608"	"13"	"34.000"	"27.000"	"1.38316370285615"	"16"	"0.001217"	"0.01638"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KISDYMK"	"[K].kISDYMk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"524.65253"	"1571.94303"	"1571.94341"	"-0.24"	"-0.00013"	"6/62"	"6"	"62"	"49836585.862793"	"HCD"	"MS2"	"28.72011"	"656.4"	"21.499"	"35.6437"	"8989"	"8989"	"8971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1140.3"	""	"1123.8"	""	"1150.3"	""	"623.8"	"2.7"	"1030.3"	"1129.5"	""	"604"	"13"	"34.000"	"27.000"	"1.5275904792494"	"13"	"0.00103"	"0.01237"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLGIEPPK"	"[R].fVNLGIEPPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.7551"	"0.0000"	"1"	"1"	"1"	"524.65637"	"1571.95456"	"1571.95614"	"-1.00"	"-0.00052"	"7/86"	"7"	"86"	"4831550.65905762"	"HCD"	"MS2"	"0"	"114.9"	"100.000"	"58.4151"	"18257"	"18257"	"18234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.6"	""	"160.5"	""	"182.1"	""	"180.1"	"1.3"	"203.2"	"203.6"	""	"545"	"49"	"34.000"	"27.000"	"0.000314316012756247"	""	"0"	"0.0001407"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLGIEPPK"	"[R].fVNLGIEPPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"524.65649"	"1571.95493"	"1571.95614"	"-0.77"	"-0.00040"	"7/86"	"7"	"86"	"4527239.90313721"	"HCD"	"MS2"	"15.5792"	"113.4"	"100.000"	"58.2095"	"18227"	"18227"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.7"	""	"147.4"	""	"151.0"	""	"205.3"	"1.7"	"197.5"	"206.0"	""	"545"	"37"	"34.000"	"27.000"	"0.00493590175238841"	"24"	"0.0001308"	"0.0002075"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLGIEPPK"	"[R].fVNLGIEPPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.7660"	"0.0000"	"1"	"1"	"1"	"524.65680"	"1571.95584"	"1571.95614"	"-0.19"	"-0.00010"	"7/86"	"7"	"86"	"6230778.93017578"	"HCD"	"MS2"	"6.278292"	"134.4"	"100.000"	"58.5015"	"18346"	"18346"	"18325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"201.0"	""	"179.3"	""	"202.5"	""	"223.4"	"1.6"	"231.5"	"232.1"	""	"552"	"47"	"34.000"	"27.000"	"0.000508053072405432"	"26"	"0"	"5.576E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLGIEPPK"	"[R].fVNLGIEPPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"786.48181"	"1571.95635"	"1571.95614"	"0.13"	"0.00011"	"8/86"	"8"	"86"	"1362758.53375244"	"HCD"	"MS2"	"16.72214"	"102.6"	"100.000"	"57.9647"	"18073"	"18073"	"18043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.2"	""	"135.8"	""	"136.4"	""	"159.0"	"1.3"	"206.5"	"191.2"	""	"552"	"49"	"34.000"	"27.000"	"0.000372313755595296"	"21"	"0"	"4.605E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLGIEPPK"	"[R].fVNLGIEPPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"786.48187"	"1571.95647"	"1571.95614"	"0.21"	"0.00017"	"8/86"	"8"	"86"	"1596899.49615479"	"HCD"	"MS2"	"7.494955"	"112.6"	"100.000"	"58.1566"	"18205"	"18205"	"18181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.8"	""	"155.9"	""	"166.0"	""	"184.0"	""	"202.4"	"207.3"	""	"552"	"46"	"34.000"	"27.000"	"0.000627926890893091"	"17"	"0"	"3.567E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLGIEPPK"	"[R].fVNLGIEPPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"786.48187"	"1571.95647"	"1571.95614"	"0.21"	"0.00017"	"12/86"	"12"	"86"	"2777502.4453125"	"HCD"	"MS2"	"0"	"179.0"	"100.000"	"58.2455"	"18188"	"18188"	"18171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.7"	""	"252.9"	""	"245.4"	""	"283.0"	"2.4"	"343.8"	"303.6"	""	"552"	"43"	"34.000"	"27.000"	"0.00135490573818118"	"22"	"0"	"6.003E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLGIEPPK"	"[R].fVNLGIEPPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"786.48206"	"1571.95683"	"1571.95614"	"0.44"	"0.00035"	"8/86"	"8"	"86"	"2822563.89154053"	"HCD"	"MS2"	"6.13556"	"178.9"	"100.000"	"58.4604"	"18329"	"18329"	"18309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"238.1"	""	"246.5"	""	"277.4"	""	"286.1"	""	"329.6"	"319.8"	""	"548"	"47"	"34.000"	"27.000"	"0.000604993296847178"	"24"	"0"	"0.0001301"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNLGIEPPK"	"[R].fVNLGIEPPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"524.65729"	"1571.95731"	"1571.95614"	"0.75"	"0.00039"	"7/86"	"7"	"86"	"5294466.58587646"	"HCD"	"MS2"	"15.52927"	"120.6"	"100.000"	"58.0820"	"18121"	"18121"	"18091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.7"	""	"158.0"	""	"170.7"	""	"206.0"	"2.3"	"222.8"	"221.5"	""	"580"	"42"	"34.000"	"27.000"	"0.0018723972642005"	"25"	"0"	"7.687E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIGVQNLLK"	"[K].dLIGVQnLLk.[K]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.4898"	"0.0000"	"1"	"1"	"1"	"524.66962"	"1571.99430"	"1571.97727"	"10.83"	"0.00568"	"8/80"	"8"	"80"	"4278788.7822876"	"HCD"	"MS2"	"53.59549"	"117.9"	"100.000"	"65.0247"	"21005"	"21005"	"20979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.8"	""	"154.6"	""	"124.0"	""	"181.5"	""	"248.7"	"299.7"	""	"350"	"49"	"32.000"	"25.000"	"0.000228579905423072"	""	"0.0003839"	"0.001947"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIGVQNLLK"	"[K].dLIGVqNLLk.[K]"	"N-Term(TMT6plex); Q6(Deamidated); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.4898"	"0.0000"	"1"	"2"	"2"	"524.66962"	"1571.99430"	"1571.97727"	"10.83"	"0.00568"	"8/80"	"8"	"80"	"4278788.7822876"	"HCD"	"MS2"	"53.59549"	"117.9"	"100.000"	"65.0247"	"21005"	"21005"	"20979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.8"	""	"154.6"	""	"124.0"	""	"181.5"	""	"248.7"	"299.7"	""	"350"	"49"	"32.000"	"25.000"	"0.000230694929247371"	""	"0.0006037"	"0.005439"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAVVAVLLTK"	"[R].aEAVVAVLLTk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"524.67566"	"1572.01242"	"1572.01365"	"-0.78"	"-0.00041"	"14/96"	"14"	"96"	"2601575.0993042"	"HCD"	"MS2"	"5.045308"	"64.5"	"100.000"	"75.8082"	"25346"	"25346"	"25329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.3"	""	"74.7"	""	"102.0"	""	"108.3"	"0.3"	"117.2"	"143.3"	""	"241"	"47"	"30.000"	"23.000"	"0.000245463570363539"	"16"	"0"	"7.337E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAVVAVLLTK"	"[R].aEAVVAVLLTk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"524.67584"	"1572.01297"	"1572.01365"	"-0.43"	"-0.00023"	"14/96"	"14"	"96"	"3232904.46911621"	"HCD"	"MS2"	"4.08544"	"73.0"	"100.000"	"75.7588"	"25377"	"25377"	"25359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.1"	""	"90.5"	""	"122.2"	""	"120.7"	""	"116.7"	"166.7"	""	"241"	"48"	"30.000"	"23.000"	"0.000170996431363536"	"16"	"0"	"4.495E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQKPVVVK"	"[R].sQkPVVVk.[R]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"524.68597"	"1572.04337"	"1572.04517"	"-1.15"	"-0.00060"	"6/68"	"6"	"68"	"20431142.7769775"	"HCD"	"MS2"	"7.894216"	"595.5"	"51.312"	"30.0396"	"6748"	"6748"	"6729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"962.3"	""	"867.3"	""	"917.0"	""	"914.5"	"1.2"	"1089.3"	"881.1"	""	"109"	"10"	"27.000"	"20.000"	"0.512149204257728"	"17"	"0.0001889"	"0.0006952"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQKPVVVK"	"[R].sQkPVVVk.[R]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"524.68646"	"1572.04483"	"1572.04517"	"-0.22"	"-0.00011"	"6/68"	"6"	"68"	"23788857.2982178"	"HCD"	"MS2"	"10.39134"	"847.0"	"68.917"	"29.9472"	"6669"	"6669"	"6650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1426.4"	""	"1231.7"	""	"1314.8"	""	"1317.1"	""	"1511.3"	"1209.0"	""	"108"	"11"	"27.000"	"20.000"	"0.469238631814603"	"17"	"0.0001859"	"0.0003598"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPPMGWLAWER"	"[R].tPPMGWLAWER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.91193"	"1572.81658"	"1572.81944"	"-1.82"	"-0.00143"	"8/98"	"8"	"98"	"2084707.29528809"	"HCD"	"MS2"	"28.06127"	"82.9"	"100.000"	"65.8705"	"21350"	"21350"	"21331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.7"	""	"128.6"	""	"136.4"	""	"87.8"	""	"157.7"	"151.3"	""	"808"	"25"	"36.000"	"29.000"	"0.128641579877736"	"14"	"0.0001889"	"0.0003999"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPPMGWLAWER"	"[R].tPPMGWLAWER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.91278"	"1572.81828"	"1572.81944"	"-0.73"	"-0.00058"	"7/98"	"7"	"98"	"1911861.93261719"	"HCD"	"MS2"	"27.57248"	"77.1"	"100.000"	"65.6279"	"21198"	"21198"	"21177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.7"	""	"109.4"	""	"103.1"	""	"94.1"	""	"146.2"	"160.1"	""	"814"	"21"	"36.000"	"29.000"	"0.315932576467877"	"14"	"0.0001889"	"0.0007336"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPPMGWLAWER"	"[R].tPPMGWLAWER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"786.91388"	"1572.82048"	"1572.81944"	"0.67"	"0.00052"	"10/98"	"10"	"98"	"1799544.87988281"	"HCD"	"MS2"	"27.55372"	"75.0"	"100.000"	"65.9780"	"21341"	"21341"	"21321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.7"	""	"114.8"	""	"114.6"	""	"88.6"	""	"131.2"	"148.8"	""	"812"	"19"	"36.000"	"29.000"	"0.554020753455104"	"18"	"0.0002277"	"0.00123"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQVEYAMK"	"[R].vFQVEYAMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"524.96625"	"1572.88419"	"1572.88601"	"-1.16"	"-0.00061"	"10/76"	"10"	"76"	"2344085.04168701"	"HCD"	"MS2"	"0"	"97.6"	"100.000"	"54.8651"	"16859"	"16859"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.0"	""	"123.8"	""	"146.0"	""	"149.9"	""	"189.3"	"196.9"	""	"942"	"19"	"36.000"	"29.000"	"0.530910001858665"	"20"	"0.0001889"	"0.0006978"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQVEYAMK"	"[R].vFQVEYAMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"786.94684"	"1572.88640"	"1572.88601"	"0.25"	"0.00020"	"8/76"	"8"	"76"	"4683124.23706055"	"HCD"	"MS2"	"0"	"368.2"	"100.000"	"54.5944"	"16695"	"16695"	"16672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"568.8"	""	"593.8"	""	"663.6"	""	"351.1"	"1.8"	"611.4"	"691.7"	""	"970"	"64"	"36.000"	"29.000"	"1.7690566425892E-05"	""	"0"	"8.799E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQVEYAMK"	"[R].vFQVEYAMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"524.96704"	"1572.88657"	"1572.88601"	"0.36"	"0.00019"	"7/76"	"7"	"76"	"2290850.84985352"	"HCD"	"MS2"	"3.674616"	"99.8"	"100.000"	"54.6727"	"16727"	"16727"	"16704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.5"	""	"138.2"	""	"155.9"	""	"138.1"	"0.9"	"200.5"	"185.6"	""	"968"	"35"	"36.000"	"29.000"	"0.0164378631933758"	"23"	"0.0001308"	"0.0002359"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQVEYAMK"	"[R].vFQVEYAMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"786.94720"	"1572.88713"	"1572.88601"	"0.72"	"0.00056"	"8/76"	"8"	"76"	"4730597.88421631"	"HCD"	"MS2"	"0"	"383.1"	"100.000"	"54.7776"	"16823"	"16823"	"16805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"643.1"	""	"621.6"	""	"678.9"	""	"345.9"	""	"633.2"	"700.9"	""	"967"	"61"	"36.000"	"29.000"	"3.88504880076746E-05"	""	"0"	"9.829E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIAEAIPELK"	"[K].mIAEAIPELk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"786.97491"	"1572.94255"	"1572.94352"	"-0.62"	"-0.00048"	"14/80"	"14"	"80"	"3883552.23931885"	"HCD"	"MS2"	"0"	"266.3"	"100.000"	"60.2194"	"18989"	"18989"	"18969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"435.2"	""	"341.8"	""	"407.8"	""	"375.5"	"3.1"	"453.1"	"503.9"	""	"676"	"45"	"35.000"	"28.000"	"0.00116927509705229"	"19"	"0"	"4.464E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIAEAIPELK"	"[K].mIAEAIPELk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"524.98608"	"1572.94370"	"1572.94352"	"0.11"	"0.00006"	"9/80"	"9"	"80"	"9776441.38452148"	"HCD"	"MS2"	"4.823035"	"151.0"	"65.799"	"60.3432"	"19093"	"19093"	"19075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"227.6"	""	"198.6"	""	"227.6"	""	"219.7"	""	"261.1"	"296.7"	""	"671"	"33"	"35.000"	"28.000"	"0.0178111731039496"	"21"	"0.0001889"	"0.0005371"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIAEAIPELK"	"[K].mIAEAIPELk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"524.98676"	"1572.94571"	"1572.94352"	"1.39"	"0.00073"	"9/80"	"9"	"80"	"5012426.25823975"	"HCD"	"MS2"	"2.916101"	"123.5"	"100.000"	"60.2653"	"19008"	"19008"	"18985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.7"	""	"169.2"	""	"179.4"	""	"189.8"	"1.4"	"220.9"	"243.9"	""	"662"	"33"	"35.000"	"28.000"	"0.0181898029246874"	"20"	"0.0001889"	"0.0009337"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIAEAIPELK"	"[K].mIAEAIPELk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"786.97729"	"1572.94731"	"1572.94352"	"2.41"	"0.00190"	"14/80"	"14"	"80"	"4275925.01757813"	"HCD"	"MS2"	"0"	"265.0"	"100.000"	"60.3483"	"19095"	"19095"	"19075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"433.2"	""	"339.6"	""	"401.2"	""	"372.7"	"1.8"	"451.8"	"508.4"	""	"610"	"43"	"34.000"	"27.000"	"0.00150418010206255"	"19"	"0.0001889"	"0.0003873"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIAEAIPELK"	"[K].mIAEAIPELk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"524.98737"	"1572.94754"	"1572.94352"	"2.56"	"0.00134"	"5/80"	"5"	"80"	"13346496.9036255"	"HCD"	"MS2"	"14.6759"	"319.4"	"100.000"	"59.9450"	"18877"	"18877"	"18857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"517.5"	""	"433.9"	""	"506.0"	""	"452.6"	"3.7"	"535.9"	"571.7"	""	"611"	"30"	"34.000"	"27.000"	"0.0311897012272696"	"22"	"0.0001889"	"0.0004998"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIAEAIPELK"	"[K].mIAEAIPELk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"786.97815"	"1572.94902"	"1572.94352"	"3.50"	"0.00275"	"14/80"	"14"	"80"	"5805251.41650391"	"HCD"	"MS2"	"0"	"385.7"	"100.000"	"59.9059"	"18861"	"18861"	"18841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"642.8"	""	"543.6"	""	"588.5"	""	"514.1"	""	"669.5"	"693.7"	""	"600"	"41"	"34.000"	"27.000"	"0.00213855909037956"	"19"	"0"	"0.0001347"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIAEAIPELK"	"[K].mIAEAIPELk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"786.97827"	"1572.94927"	"1572.94352"	"3.65"	"0.00287"	"8/80"	"8"	"80"	"5407013.77770996"	"HCD"	"MS2"	"0"	"352.8"	"100.000"	"60.0343"	"18967"	"18967"	"18948"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"599.6"	""	"483.9"	""	"529.1"	""	"498.3"	""	"596.7"	"629.6"	""	"600"	"49"	"34.000"	"27.000"	"0.000347633206846538"	"23"	"0"	"9.825E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQILNEAWK"	"[R].lQILNEAWk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"786.97913"	"1572.95098"	"1572.95138"	"-0.26"	"-0.00020"	"8/78"	"8"	"78"	"665799.890686035"	"HCD"	"MS2"	"0"	"60.2"	"100.000"	"64.2066"	"20671"	"20671"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.5"	""	"68.9"	""	"80.0"	""	"101.4"	"0.5"	"123.3"	"127.9"	""	"592"	"50"	"34.000"	"27.000"	"0.00027624327303591"	"26"	"0"	"7.091E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIEFPLPDR"	"[R].kIEFPLPDR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"1"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"524.98969"	"1572.95450"	"1572.95138"	"1.98"	"0.00104"	"10/90"	"10"	"90"	"7701074.03424072"	"HCD"	"MS2"	"18.43642"	"315.2"	"100.000"	"44.3624"	"12596"	"12596"	"12572"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"385.9"	""	"355.1"	""	"426.0"	""	"550.1"	"6.2"	"627.3"	"641.1"	""	"677"	"14"	"35.000"	"28.000"	"1.42744266410575"	"19"	"0.0006037"	"0.006181"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIEFPLPDR"	"[R].kIEFPLPDR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"524.99017"	"1572.95597"	"1572.95138"	"2.91"	"0.00153"	"12/90"	"12"	"90"	"6008202.71850586"	"HCD"	"MS2"	"19.04081"	"264.7"	"100.000"	"44.1306"	"12452"	"12452"	"12422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"318.6"	""	"288.0"	""	"342.5"	""	"447.1"	""	"553.7"	"564.6"	""	"670"	"12"	"35.000"	"28.000"	"2.06559325623596"	"19"	"0.001966"	"0.03009"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.6038"	"0.0000"	"1"	"1"	"1"	"786.98846"	"1572.96965"	"1572.97251"	"-1.82"	"-0.00143"	"15/88"	"15"	"88"	"5967585.87774658"	"HCD"	"MS2"	"15.45313"	"381.5"	"100.000"	"50.7504"	"15194"	"15194"	"15174"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"725.9"	""	"638.5"	""	"429.4"	""	"526.5"	"0.9"	"663.4"	"623.6"	""	"571"	"53"	"34.000"	"27.000"	"0.000146759462526783"	""	"0"	"8.982E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLQALNEVK"	"[K].sLLQALNEVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8654"	"0.0000"	"1"	"1"	"1"	"524.99512"	"1572.97080"	"1572.97251"	"-1.09"	"-0.00057"	"8/98"	"8"	"98"	"2736753.11047363"	"HCD"	"MS2"	"4.196719"	"77.8"	"100.000"	"63.6120"	"20428"	"20428"	"20403"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.5"	""	"97.1"	""	"100.0"	""	"141.1"	""	"149.7"	"151.5"	""	"557"	"52"	"34.000"	"27.000"	"0.000176126700608277"	"22"	"0"	"5.919E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEILSNALK"	"[R].iNEILSNALk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"3"	"3"	"0.5227"	"0.0000"	"1"	"1"	"1"	"524.99518"	"1572.97098"	"1572.97251"	"-0.97"	"-0.00051"	"8/94"	"8"	"94"	"3265078.46252441"	"HCD"	"MS2"	"2.49157"	"85.2"	"100.000"	"64.8590"	"20937"	"20937"	"20915"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.3"	""	"99.6"	""	"92.6"	""	"170.1"	""	"163.8"	"165.4"	""	"561"	"44"	"34.000"	"27.000"	"0.00116931862063429"	""	"0"	"7.814E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"524.99518"	"1572.97098"	"1572.97251"	"-0.97"	"-0.00051"	"10/88"	"10"	"88"	"31207975.4899902"	"HCD"	"MS2"	"17.68976"	"278.0"	"34.169"	"50.7844"	"15158"	"15158"	"15138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"455.7"	""	"417.3"	""	"338.4"	""	"419.1"	""	"508.7"	"497.1"	""	"561"	"36"	"34.000"	"27.000"	"0.00729344757467859"	"27"	"0.0001889"	"0.0005594"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"524.99518"	"1572.97098"	"1572.97251"	"-0.97"	"-0.00051"	"10/88"	"10"	"88"	"34837893.9117432"	"HCD"	"MS2"	"19.49752"	"296.6"	"29.705"	"50.9796"	"15288"	"15288"	"15270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"450.7"	""	"452.0"	""	"328.9"	""	"489.6"	""	"563.3"	"531.6"	""	"561"	"36"	"34.000"	"27.000"	"0.00742904288879179"	"27"	"0.0001889"	"0.000392"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.7302"	"0.0000"	"1"	"1"	"1"	"786.98914"	"1572.97099"	"1572.97251"	"-0.97"	"-0.00076"	"16/88"	"16"	"88"	"9786798.66375732"	"HCD"	"MS2"	"2.958172"	"578.6"	"100.000"	"51.0577"	"15320"	"15320"	"15302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1126.4"	""	"1005.4"	""	"679.3"	""	"737.5"	""	"1005.3"	"916.7"	""	"561"	"63"	"34.000"	"27.000"	"1.45523410919574E-05"	""	"0"	"6.109E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.7167"	"0.0000"	"1"	"1"	"1"	"786.98920"	"1572.97112"	"1572.97251"	"-0.89"	"-0.00070"	"16/88"	"16"	"88"	"7324230.33111572"	"HCD"	"MS2"	"6.336583"	"477.9"	"100.000"	"50.5864"	"15077"	"15077"	"15058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"915.4"	""	"836.2"	""	"554.3"	""	"641.5"	"2.0"	"815.6"	"752.6"	""	"560"	"60"	"34.000"	"27.000"	"2.57725880090888E-05"	""	"0"	"7.903E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLQALNEVK"	"[K].sLLQALNEVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"524.99524"	"1572.97116"	"1572.97251"	"-0.86"	"-0.00045"	"10/98"	"10"	"98"	"1226980.92266846"	"HCD"	"MS2"	"13.97321"	"49.0"	"100.000"	"63.6921"	"20408"	"20408"	"20377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.6"	""	"67.6"	""	"70.6"	""	"70.3"	""	"84.6"	"97.9"	""	"560"	"14"	"34.000"	"27.000"	"1.13804132166259"	"13"	"0.0002277"	"0.001324"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"524.99554"	"1572.97208"	"1572.97251"	"-0.28"	"-0.00014"	"11/88"	"11"	"88"	"31433772.2879639"	"HCD"	"MS2"	"6.51319"	"256.9"	"36.199"	"51.2974"	"15418"	"15418"	"15398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"452.0"	""	"410.8"	""	"306.9"	""	"359.0"	""	"447.6"	"456.1"	""	"553"	"42"	"34.000"	"27.000"	"0.00170881534638272"	"27"	"0.0001859"	"0.0003239"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLQALNEVK"	"[K].sLLQALNEVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"786.98969"	"1572.97209"	"1572.97251"	"-0.27"	"-0.00021"	"9/98"	"9"	"98"	"4075954.27893066"	"HCD"	"MS2"	"24.45987"	"253.5"	"100.000"	"63.4344"	"20356"	"20356"	"20339"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.0"	""	"284.7"	""	"330.9"	""	"469.0"	"2.8"	"494.2"	"493.0"	""	"553"	"63"	"34.000"	"27.000"	"1.49518570294453E-05"	"23"	"0"	"4.066E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEILSNALK"	"[R].iNEILSNALk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"786.98975"	"1572.97222"	"1572.97251"	"-0.19"	"-0.00015"	"16/94"	"16"	"94"	"3404300.17565918"	"HCD"	"MS2"	"36.0576"	"212.6"	"100.000"	"64.8175"	"20920"	"20920"	"20899"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"301.9"	""	"230.8"	""	"217.4"	""	"405.1"	""	"404.3"	"460.3"	""	"553"	"56"	"34.000"	"27.000"	"6.80291642546818E-05"	""	"0"	"6.679E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.7385"	"0.0000"	"1"	"1"	"1"	"786.98981"	"1572.97234"	"1572.97251"	"-0.11"	"-0.00009"	"16/88"	"16"	"88"	"9121165.90563965"	"HCD"	"MS2"	"6.46601"	"585.6"	"100.000"	"50.8923"	"15203"	"15203"	"15186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1131.5"	""	"1001.5"	""	"678.1"	""	"760.6"	"4.8"	"970.8"	"989.0"	""	"551"	"65"	"34.000"	"27.000"	"8.22472911511898E-06"	""	"0"	"4.983E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLQALNEVK"	"[K].sLLQALNEVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"786.98987"	"1572.97246"	"1572.97251"	"-0.03"	"-0.00003"	"9/98"	"9"	"98"	"3985490.80822754"	"HCD"	"MS2"	"19.79639"	"246.3"	"100.000"	"63.3897"	"20284"	"20284"	"20265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"323.3"	"2.4"	"275.9"	""	"304.4"	""	"478.4"	""	"471.8"	"481.2"	""	"539"	"63"	"34.000"	"27.000"	"1.40785772935263E-05"	"23"	"0"	"5.329E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEILSNALK"	"[R].iNEILSNALk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"3"	"3"	"0.5417"	"0.0000"	"1"	"1"	"1"	"524.99597"	"1572.97336"	"1572.97251"	"0.54"	"0.00028"	"7/94"	"7"	"94"	"2947296.87402344"	"HCD"	"MS2"	"6.695449"	"79.4"	"100.000"	"64.8210"	"20869"	"20869"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.1"	""	"85.5"	""	"87.1"	""	"160.3"	""	"154.2"	"157.4"	""	"554"	"48"	"34.000"	"27.000"	"0.000475860623242652"	""	"0"	"3.706E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"524.99597"	"1572.97336"	"1572.97251"	"0.54"	"0.00028"	"9/88"	"9"	"88"	"4622979.15386963"	"HCD"	"MS2"	"40.53703"	"154.1"	"100.000"	"51.6261"	"15553"	"15553"	"15526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"210.8"	""	"224.4"	""	"203.6"	""	"227.2"	"1.4"	"301.7"	"292.2"	""	"554"	"14"	"34.000"	"27.000"	"1.06286907001361"	"21"	"0.0006396"	"0.006209"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.6825"	"0.0000"	"1"	"1"	"1"	"786.99048"	"1572.97368"	"1572.97251"	"0.74"	"0.00058"	"16/88"	"16"	"88"	"5584955.02539063"	"HCD"	"MS2"	"1.032169"	"356.1"	"100.000"	"51.2098"	"15332"	"15332"	"15314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"694.9"	""	"607.8"	""	"429.3"	""	"441.1"	""	"621.3"	"574.7"	""	"554"	"63"	"34.000"	"27.000"	"1.46379334741725E-05"	""	"0"	"3.961E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.7302"	"0.0000"	"1"	"1"	"1"	"786.99048"	"1572.97368"	"1572.97251"	"0.74"	"0.00058"	"16/88"	"16"	"88"	"7474079.72949219"	"HCD"	"MS2"	"0.9387172"	"457.1"	"100.000"	"51.3661"	"15447"	"15447"	"15430"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"884.5"	""	"784.3"	""	"529.0"	""	"595.9"	"4.7"	"758.0"	"765.1"	""	"554"	"63"	"34.000"	"27.000"	"1.46379334741725E-05"	""	"0"	"7.465E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.7179"	"0.0000"	"1"	"1"	"1"	"524.99609"	"1572.97373"	"1572.97251"	"0.77"	"0.00040"	"11/88"	"11"	"88"	"25099748.7595215"	"HCD"	"MS2"	"5.304633"	"370.9"	"62.445"	"51.0878"	"15283"	"15283"	"15266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"651.9"	""	"611.7"	""	"440.1"	""	"520.8"	""	"659.8"	"627.7"	""	"554"	"39"	"34.000"	"27.000"	"0.0033843850586567"	"26"	"0.0001308"	"0.0002752"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEILSNALK"	"[R].iNEILSNALk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.2653"	"0.0000"	"1"	"1"	"1"	"786.99054"	"1572.97380"	"1572.97251"	"0.82"	"0.00064"	"8/94"	"8"	"94"	"3103709.16577148"	"HCD"	"MS2"	"32.86291"	"204.7"	"100.000"	"64.8050"	"20862"	"20862"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"288.3"	""	"212.7"	""	"208.4"	""	"411.9"	""	"395.7"	"426.2"	""	"537"	"49"	"34.000"	"27.000"	"0.00033646840547177"	""	"0"	"7.11E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLQALNEVK"	"[K].sLLQALNEVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8431"	"0.0000"	"1"	"1"	"1"	"524.99615"	"1572.97391"	"1572.97251"	"0.89"	"0.00047"	"7/98"	"7"	"98"	"3940678.84759521"	"HCD"	"MS2"	"4.758774"	"101.3"	"100.000"	"63.3759"	"20279"	"20279"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.7"	""	"111.9"	""	"134.6"	""	"186.0"	"0.9"	"198.3"	"197.4"	""	"537"	"51"	"34.000"	"27.000"	"0.000206511523216955"	"24"	"0"	"9.671E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].dILLISQNAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"524.99658"	"1572.97519"	"1572.97251"	"1.70"	"0.00089"	"10/88"	"10"	"88"	"4762835.75909424"	"HCD"	"MS2"	"43.75235"	"149.4"	"100.000"	"51.4354"	"15425"	"15425"	"15394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"208.3"	""	"197.5"	""	"198.2"	""	"233.6"	"3.7"	"297.7"	"278.2"	""	"537"	"15"	"34.000"	"27.000"	"0.887042217683848"	"21"	"0.001966"	"0.02857"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILIGEILEK"	"[K].sILIGEILEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2U7"	"mRNA cap guanine-N7 methyltransferase OS=Rattus norvegicus OX=10116 GN=Rnmt PE=1 SV=1"	"Q5U2U7"	"mRNA cap guanine-N7 methyltransferase OS=Rattus norvegicus OX=10116 GN=Rnmt PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"525.00336"	"1572.99552"	"1572.99767"	"-1.37"	"-0.00072"	"9/88"	"9"	"88"	"932217.166992188"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"70.8239"	"23363"	"23363"	"23338"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.8"	""	"39.4"	""	"41.1"	""	"52.8"	"1.7"	"49.3"	"58.8"	""	"416"	"28"	"33.000"	"26.000"	"0.0303433366137272"	""	"0.0001308"	"0.0003136"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILIGEILEK"	"[K].sILIGEILEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2U7"	"mRNA cap guanine-N7 methyltransferase OS=Rattus norvegicus OX=10116 GN=Rnmt PE=1 SV=1"	"Q5U2U7"	"mRNA cap guanine-N7 methyltransferase OS=Rattus norvegicus OX=10116 GN=Rnmt PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"787.00159"	"1572.99590"	"1572.99767"	"-1.12"	"-0.00088"	"13/88"	"13"	"88"	"630079.152160645"	"HCD"	"MS2"	"18.56051"	"48.8"	"100.000"	"70.8654"	"23380"	"23380"	"23354"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.5"	""	"62.5"	""	"70.3"	""	"87.5"	""	"91.4"	"81.6"	""	"416"	"40"	"33.000"	"26.000"	"0.00206093044537696"	"20"	"0"	"0.0001596"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILIGEILEK"	"[K].sILIGEILEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2U7"	"mRNA cap guanine-N7 methyltransferase OS=Rattus norvegicus OX=10116 GN=Rnmt PE=1 SV=1"	"Q5U2U7"	"mRNA cap guanine-N7 methyltransferase OS=Rattus norvegicus OX=10116 GN=Rnmt PE=1 SV=1"	"0"	"3"	"3"	"0.3600"	"0.0000"	"1"	"1"	"1"	"525.00397"	"1572.99735"	"1572.99767"	"-0.20"	"-0.00011"	"9/88"	"9"	"88"	"1043890.87554932"	"HCD"	"MS2"	"18.17847"	"31.2"	"100.000"	"70.9452"	"23361"	"23361"	"23331"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.5"	""	"43.1"	""	"46.9"	""	"55.6"	""	"55.9"	"55.4"	""	"417"	"25"	"33.000"	"26.000"	"0.0609685770780335"	""	"0.0001889"	"0.0007598"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILIGEILEK"	"[K].sILIGEILEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2U7"	"mRNA cap guanine-N7 methyltransferase OS=Rattus norvegicus OX=10116 GN=Rnmt PE=1 SV=1"	"Q5U2U7"	"mRNA cap guanine-N7 methyltransferase OS=Rattus norvegicus OX=10116 GN=Rnmt PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"787.00293"	"1572.99858"	"1572.99767"	"0.58"	"0.00046"	"8/88"	"8"	"88"	"709431.611999512"	"HCD"	"MS2"	"26.79451"	"55.6"	"100.000"	"70.9361"	"23357"	"23357"	"23331"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.6"	""	"65.8"	""	"82.4"	""	"93.0"	"2.4"	"104.0"	"102.3"	""	"422"	"49"	"33.000"	"26.000"	"0.000288590782200724"	""	"0"	"1.784E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLFDYLADK"	"[R].mLFDYLADk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"525.29401"	"1573.86747"	"1573.87002"	"-1.62"	"-0.00085"	"9/72"	"9"	"72"	"915964.79296875"	"HCD"	"MS2"	"31.06114"	"38.0"	"100.000"	"73.9826"	"24653"	"24653"	"24623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.6"	""	"56.0"	""	"58.4"	""	"52.8"	""	"77.3"	"67.7"	""	"1037"	"27"	"37.000"	"30.000"	"0.104411602355365"	"17"	"0.0005564"	"0.003381"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLFDYLADK"	"[R].mLFDYLADk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"787.43793"	"1573.86858"	"1573.87002"	"-0.92"	"-0.00072"	"8/72"	"8"	"72"	"1177573.98132324"	"HCD"	"MS2"	"18.4082"	"106.4"	"100.000"	"73.8927"	"24564"	"24564"	"24545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.7"	""	"142.1"	""	"147.6"	""	"113.8"	"1.9"	"204.7"	"226.7"	""	"1084"	"46"	"37.000"	"30.000"	"0.00132433935956013"	"24"	"0"	"6.743E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLFDYLADK"	"[R].mLFDYLADk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"525.29449"	"1573.86893"	"1573.87002"	"-0.69"	"-0.00036"	"9/72"	"9"	"72"	"845766.572937012"	"HCD"	"MS2"	"35.39433"	"39.3"	"100.000"	"74.0657"	"24635"	"24635"	"24609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.4"	""	"56.1"	""	"56.6"	""	"50.0"	"0.1"	"78.2"	"81.4"	""	"1080"	"21"	"37.000"	"30.000"	"0.44095448053364"	"20"	"0.0004166"	"0.002441"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLFDYLADK"	"[R].mLFDYLADk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"787.43835"	"1573.86943"	"1573.87002"	"-0.38"	"-0.00030"	"8/72"	"8"	"72"	"1242829.81616211"	"HCD"	"MS2"	"19.23229"	"108.4"	"100.000"	"73.8815"	"24611"	"24611"	"24591"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.3"	""	"159.6"	""	"154.2"	""	"112.8"	""	"198.4"	"228.7"	""	"1081"	"49"	"37.000"	"30.000"	"0.000651321925770957"	"26"	"0"	"7.273E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSGSFGTVYK"	"[R].iGSGSFGTVYk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11345"	"RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Raf1 PE=1 SV=1"	"P11345"	"RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Raf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"787.45197"	"1573.89665"	"1573.89901"	"-1.50"	"-0.00118"	"10/90"	"10"	"90"	"693334.624450684"	"HCD"	"MS2"	"0"	"74.7"	"100.000"	"44.5938"	"12690"	"12690"	"12675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.3"	""	"110.4"	""	"108.1"	""	"118.0"	""	"150.5"	"133.4"	""	"897"	"46"	"36.000"	"29.000"	"0.00117425507918621"	"21"	"0"	"1.056E-05"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSGSFGTVYK"	"[R].iGSGSFGTVYk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11345"	"RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Raf1 PE=1 SV=1"	"P11345"	"RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Raf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"787.45288"	"1573.89849"	"1573.89901"	"-0.34"	"-0.00026"	"10/90"	"10"	"90"	"734827.504089355"	"HCD"	"MS2"	"0"	"76.3"	"100.000"	"44.3209"	"12530"	"12530"	"12502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.9"	""	"120.0"	""	"119.7"	""	"117.8"	"0.9"	"132.8"	"129.1"	""	"911"	"48"	"36.000"	"29.000"	"0.000768224903064572"	"21"	"0"	"5.932E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLIGLGTWK"	"[K].mPLIGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"787.47882"	"1573.95036"	"1573.95403"	"-2.33"	"-0.00183"	"8/72"	"8"	"72"	"1033922.55657959"	"HCD"	"MS2"	"12.72889"	"75.9"	"100.000"	"72.9957"	"24250"	"24250"	"24223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.7"	""	"126.6"	""	"116.1"	""	"92.4"	""	"123.0"	"134.4"	""	"718"	"49"	"35.000"	"28.000"	"0.000468915348839331"	"23"	"0"	"5.208E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLIGLGTWK"	"[K].mPLIGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.6984"	"0.0000"	"1"	"1"	"1"	"525.32227"	"1573.95224"	"1573.95403"	"-1.13"	"-0.00059"	"8/72"	"8"	"72"	"3776249.32159424"	"HCD"	"MS2"	"1.416682"	"89.1"	"100.000"	"73.1366"	"24307"	"24307"	"24287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.1"	""	"143.4"	""	"131.7"	""	"106.1"	"1.1"	"152.2"	"157.5"	""	"700"	"63"	"35.000"	"28.000"	"1.58514152966267E-05"	""	"0"	"2.502E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLIGLGTWK"	"[K].mPLIGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"787.47992"	"1573.95256"	"1573.95403"	"-0.93"	"-0.00073"	"8/72"	"8"	"72"	"1234058.48596191"	"HCD"	"MS2"	"8.904971"	"92.1"	"100.000"	"73.0438"	"24218"	"24218"	"24193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.0"	""	"145.6"	""	"147.2"	""	"105.6"	"1.5"	"148.2"	"166.0"	""	"704"	"49"	"35.000"	"28.000"	"0.000460832036895791"	"28"	"0"	"3.086E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLIGLGTWK"	"[K].mPLIGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"525.32239"	"1573.95261"	"1573.95403"	"-0.90"	"-0.00047"	"8/72"	"8"	"72"	"3619691.97424316"	"HCD"	"MS2"	"3.202546"	"90.3"	"100.000"	"73.1800"	"24274"	"24274"	"24257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.6"	""	"134.3"	""	"147.8"	""	"102.0"	""	"155.7"	"173.3"	""	"704"	"56"	"35.000"	"28.000"	"7.93492202677655E-05"	""	"0"	"3.322E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLIGLGTWK"	"[K].mPLIGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"787.48029"	"1573.95329"	"1573.95403"	"-0.47"	"-0.00037"	"8/72"	"8"	"72"	"1731151.0145874"	"HCD"	"MS2"	"7.789576"	"116.0"	"100.000"	"73.3413"	"24339"	"24339"	"24321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.3"	""	"160.6"	""	"190.4"	""	"122.6"	"2.1"	"195.9"	"247.0"	""	"691"	"49"	"35.000"	"28.000"	"0.000434958729774885"	"27"	"0"	"5.235E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLIGLGTWK"	"[K].mPLIGLGTWk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"787.48035"	"1573.95342"	"1573.95403"	"-0.39"	"-0.00031"	"8/72"	"8"	"72"	"2242497.96307373"	"HCD"	"MS2"	"1.716115"	"142.1"	"100.000"	"73.2884"	"24369"	"24369"	"24351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.0"	""	"204.3"	""	"214.7"	""	"156.1"	"1.6"	"237.6"	"301.8"	""	"691"	"49"	"35.000"	"28.000"	"0.000428004220646243"	""	"0"	"9.871E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATTVSAPDLK"	"[R].lATTVSAPDLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"787.48138"	"1573.95549"	"1573.95653"	"-0.66"	"-0.00052"	"15/92"	"15"	"92"	"771186.38079834"	"HCD"	"MS2"	"0"	"65.1"	"100.000"	"44.9772"	"12797"	"12797"	"12768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.3"	""	"62.4"	""	"73.7"	""	"160.2"	""	"141.3"	"122.0"	""	"679"	"60"	"35.000"	"28.000"	"3.74834691456754E-05"	""	"0"	"1.7E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATTVSAPDLK"	"[R].lATTVSAPDLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"787.48199"	"1573.95671"	"1573.95653"	"0.12"	"0.00009"	"15/92"	"15"	"92"	"1021030.58544922"	"HCD"	"MS2"	"18.71629"	"85.8"	"100.000"	"45.1977"	"12936"	"12936"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.6"	""	"86.7"	""	"93.5"	""	"223.4"	"1.7"	"175.1"	"147.8"	""	"689"	"58"	"35.000"	"28.000"	"6.02822184231194E-05"	"28"	"0"	"1.977E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVLTIVAVTK"	"[K].gDVLTIVAVTk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.33527"	"1573.99125"	"1573.99291"	"-1.06"	"-0.00056"	"11/96"	"11"	"96"	"2316767.18322754"	"HCD"	"MS2"	"32.01366"	"62.5"	"100.000"	"60.6430"	"19216"	"19216"	"19187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.9"	""	"85.1"	""	"79.7"	""	"99.6"	""	"128.4"	"127.8"	""	"424"	"35"	"33.000"	"26.000"	"0.00706863995058058"	"15"	"0.0001889"	"0.0008804"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSVNILLK"	"[K].dLTSVNILLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"525.33557"	"1573.99216"	"1573.99291"	"-0.48"	"-0.00025"	"8/86"	"8"	"86"	"1215589.84741211"	"HCD"	"MS2"	"5.496038"	"42.1"	"100.000"	"65.4824"	"21139"	"21139"	"21113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.7"	""	"50.5"	""	"53.3"	""	"65.0"	"0.2"	"88.7"	"107.2"	""	"428"	"38"	"33.000"	"26.000"	"0.00374467191365677"	"22"	"0.0001308"	"0.0002413"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSVNILLK"	"[K].dLTSVNILLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.8154"	"0.0000"	"1"	"1"	"1"	"787.49994"	"1573.99260"	"1573.99291"	"-0.20"	"-0.00016"	"9/86"	"9"	"86"	"3753049.36663818"	"HCD"	"MS2"	"0"	"248.8"	"100.000"	"65.2762"	"21108"	"21108"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.8"	""	"275.3"	""	"245.3"	""	"345.7"	"4.6"	"548.4"	"732.9"	""	"428"	"65"	"33.000"	"26.000"	"6.18605494826212E-06"	""	"0"	"3.08E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSVNILLK"	"[K].dLTSVNILLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"787.50055"	"1573.99382"	"1573.99291"	"0.58"	"0.00045"	"9/86"	"9"	"86"	"3683907.55065918"	"HCD"	"MS2"	"0"	"258.3"	"100.000"	"65.3027"	"21066"	"21066"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.6"	""	"274.8"	""	"242.4"	""	"372.6"	""	"597.6"	"765.6"	""	"472"	"63"	"33.000"	"26.000"	"1.19374620232735E-05"	""	"0"	"6.893E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTVVPTKK"	"[R].nTVVPTkk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.34583"	"1574.02292"	"1574.02444"	"-0.96"	"-0.00051"	"6/78"	"6"	"78"	"19614297.7883301"	"HCD"	"MS2"	"9.80598"	"631.4"	"57.335"	"29.3928"	"6442"	"6442"	"6422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1241.4"	""	"1032.2"	""	"1100.1"	""	"781.3"	"12.0"	"814.6"	"970.7"	""	"244"	"3"	"30.000"	"23.000"	"6.84478530759614"	"13"	"0.003788"	"0.08839"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTVVPTKK"	"[R].nTVVPTkk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.34601"	"1574.02347"	"1574.02444"	"-0.61"	"-0.00032"	"8/78"	"8"	"78"	"21618107.6509399"	"HCD"	"MS2"	"11.14119"	"793.2"	"67.992"	"29.3956"	"6485"	"6485"	"6468"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1711.7"	""	"1333.2"	""	"1431.7"	""	"1006.0"	"3.1"	"919.1"	"1060.0"	""	"244"	"6"	"30.000"	"23.000"	"3.2912421075828"	"13"	"0.0008731"	"0.008521"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSSTSVFK"	"[R].fDVSSTSVFk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"787.94434"	"1574.88140"	"1574.88303"	"-1.04"	"-0.00082"	"16/82"	"16"	"82"	"4973181.61968994"	"HCD"	"MS2"	"0"	"405.6"	"100.000"	"54.2954"	"16573"	"16573"	"16554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"432.3"	""	"622.5"	""	"619.5"	""	"666.4"	"5.3"	"756.0"	"743.0"	""	"982"	"54"	"36.000"	"29.000"	"0.000193233087048787"	"21"	"0"	"4.214E-05"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSSTSVFK"	"[R].fDVSSTSVFk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"787.94489"	"1574.88249"	"1574.88303"	"-0.34"	"-0.00027"	"15/82"	"15"	"82"	"4738788.47833252"	"HCD"	"MS2"	"0"	"410.3"	"100.000"	"54.4674"	"16697"	"16697"	"16680"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"465.1"	""	"639.9"	""	"604.4"	""	"696.6"	"0.4"	"731.1"	"750.2"	""	"994"	"51"	"36.000"	"29.000"	"0.00041148725536503"	"19"	"0"	"6.094E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHATTSNTVSK"	"[K].aHATTSNTVSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.9800"	"0.0000"	"1"	"1"	"1"	"525.63385"	"1574.88700"	"1574.89024"	"-2.06"	"-0.00108"	"12/100"	"12"	"100"	"1446734.00732422"	"HCD"	"MS2"	"14.9691"	"45.1"	"100.000"	"22.0000"	"3509"	"3509"	"3485"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.2"	""	"47.1"	""	"65.7"	""	"73.4"	"0.8"	"79.6"	"104.6"	""	"1025"	"50"	"37.000"	"30.000"	"0.000511321282709059"	"16"	"0"	"2.834E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHATTSNTVSK"	"[K].aHATTSNTVSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.63464"	"1574.88938"	"1574.89024"	"-0.55"	"-0.00029"	"11/100"	"11"	"100"	"700755.835571289"	"HCD"	"MS2"	"14.83471"	"34.9"	"100.000"	"22.0569"	"3567"	"3567"	"3541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.7"	""	"50.8"	""	"60.0"	""	"42.7"	""	"66.9"	"58.5"	""	"1034"	"31"	"37.000"	"30.000"	"0.0372812566737559"	"14"	"0"	"0.0001224"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLYTAMPLPIGR"	"[K].nLYTAMPLPIGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"787.94946"	"1574.89165"	"1574.89260"	"-0.60"	"-0.00048"	"14/110"	"14"	"110"	"1468505.50878906"	"HCD"	"MS2"	"50.38346"	"112.7"	"100.000"	"60.5968"	"19197"	"19197"	"19171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.0"	""	"139.5"	""	"147.6"	""	"176.4"	""	"240.2"	"228.3"	""	"978"	"4"	"36.000"	"29.000"	"20.1980228473189"	"15"	"0.0001308"	"0.0002631"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLYTAMPLPIGR"	"[K].nLYTAMPLPIGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"787.95050"	"1574.89372"	"1574.89260"	"0.71"	"0.00056"	"9/110"	"9"	"110"	"1701579.08361816"	"HCD"	"MS2"	"39.52181"	"123.4"	"100.000"	"60.3851"	"19057"	"19057"	"19033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.5"	""	"146.0"	""	"159.0"	""	"193.9"	"1.0"	"248.0"	"263.1"	""	"977"	"12"	"36.000"	"29.000"	"3.10359160209577"	"13"	"0"	"9.033E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLELPEAFLAGR"	"[K].mLELPEAFLAGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"788.44000"	"1575.87273"	"1575.87662"	"-2.47"	"-0.00194"	"7/94"	"7"	"94"	"195343.589660645"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"77.7437"	"26176"	"26176"	"26149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.4"	""	"24.4"	""	"27.7"	""	"28.1"	"1.8"	"24.8"	"28.6"	""	"1099"	"16"	"37.000"	"30.000"	"1.42222299687662"	"26"	"0.0005564"	"0.0036"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLELPEAFLAGR"	"[K].mLELPEAFLAGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"788.44153"	"1575.87578"	"1575.87662"	"-0.53"	"-0.00042"	"8/94"	"8"	"94"	"518208.133239746"	"HCD"	"MS2"	"18.84016"	"31.8"	"100.000"	"77.4254"	"26046"	"26046"	"26021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.3"	""	"45.9"	""	"48.1"	""	"46.0"	"0.7"	"53.0"	"60.9"	""	"1095"	"47"	"37.000"	"30.000"	"0.00103129787649567"	"25"	"0"	"3.993E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLELPEAFLAGR"	"[K].mLELPEAFLAGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"788.44348"	"1575.87969"	"1575.87662"	"1.95"	"0.00154"	"10/94"	"10"	"94"	"592881.041625977"	"HCD"	"MS2"	"29.11623"	"33.7"	"100.000"	"77.4911"	"26022"	"26022"	"25993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.6"	""	"52.2"	""	"48.7"	""	"47.4"	""	"49.6"	"67.5"	""	"1176"	"43"	"37.000"	"30.000"	"0.00296740842967355"	"27"	"0.0001308"	"0.0002765"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"525.97406"	"1575.90763"	"1575.90963"	"-1.27"	"-0.00067"	"16/96"	"16"	"96"	"5450490.15130615"	"HCD"	"MS2"	"17.07453"	"30.6"	"100.000"	"75.3666"	"25217"	"25217"	"25199"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.0"	"4.0"	"39.9"	""	"38.3"	""	"51.1"	""	"53.9"	"69.8"	""	"1097"	"50"	"37.000"	"30.000"	"0.000557412408039576"	"22"	"0"	"1.485E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"788.45776"	"1575.90825"	"1575.90963"	"-0.88"	"-0.00069"	"8/96"	"8"	"96"	"2057279.48937988"	"HCD"	"MS2"	"8.225414"	"55.0"	"100.000"	"75.3096"	"25142"	"25142"	"25121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.6"	""	"83.0"	""	"75.1"	""	"85.6"	"0.8"	"93.3"	"100.3"	""	"1082"	"37"	"37.000"	"30.000"	"0.00975432597805027"	"16"	"0.0001308"	"0.0002265"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"788.45776"	"1575.90825"	"1575.90963"	"-0.88"	"-0.00069"	"10/96"	"10"	"96"	"2510825.77612305"	"HCD"	"MS2"	"3.751558"	"62.8"	"100.000"	"75.3022"	"25191"	"25191"	"25167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.1"	""	"94.2"	""	"87.8"	""	"96.7"	"0.3"	"106.7"	"117.3"	""	"1082"	"41"	"37.000"	"30.000"	"0.00393728874254421"	"16"	"0"	"4.151E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"525.97430"	"1575.90836"	"1575.90963"	"-0.81"	"-0.00042"	"15/96"	"15"	"96"	"4974495.07397461"	"HCD"	"MS2"	"6.379828"	"21.3"	"100.000"	"75.6803"	"25345"	"25345"	"25327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.6"	"2.9"	"25.2"	""	"32.0"	""	"31.4"	""	"38.8"	"42.9"	""	"1084"	"54"	"37.000"	"30.000"	"0.000229086388931957"	"25"	"0"	"2.371E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"525.97430"	"1575.90836"	"1575.90963"	"-0.81"	"-0.00042"	"9/96"	"9"	"96"	"5140700.61633301"	"HCD"	"MS2"	"18.62603"	"25.7"	"100.000"	"75.3860"	"25173"	"25173"	"25153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.1"	"4.0"	"32.5"	""	"34.7"	""	"38.8"	""	"51.4"	"52.2"	""	"1084"	"52"	"37.000"	"30.000"	"0.000381943643380193"	"24"	"0"	"1.575E-05"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"788.45782"	"1575.90837"	"1575.90963"	"-0.80"	"-0.00063"	"11/96"	"11"	"96"	"10565069.8388672"	"HCD"	"MS2"	"0"	"145.0"	"68.856"	"75.5974"	"25312"	"25312"	"25295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.0"	""	"208.2"	""	"206.8"	""	"217.4"	""	"254.3"	"283.3"	""	"1084"	"41"	"37.000"	"30.000"	"0.00385477724400105"	"21"	"0"	"1.677E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.8448"	"0.0000"	"1"	"1"	"1"	"525.97437"	"1575.90854"	"1575.90963"	"-0.69"	"-0.00036"	"16/96"	"16"	"96"	"5457659.39038086"	"HCD"	"MS2"	"3.85949"	"23.6"	"100.000"	"75.6949"	"25299"	"25299"	"25281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.7"	"4.6"	"27.0"	""	"30.7"	""	"43.1"	""	"45.5"	"48.7"	""	"1084"	"58"	"37.000"	"30.000"	"7.79828829414668E-05"	"25"	"0"	"1.457E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"525.97449"	"1575.90891"	"1575.90963"	"-0.46"	"-0.00024"	"8/96"	"8"	"96"	"360276.854797363"	"HCD"	"MS2"	"31.32752"	"10.7"	"100.000"	"76.0714"	"25501"	"25501"	"25471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.1"	""	"14.4"	""	"14.9"	""	"19.7"	""	"20.4"	"18.6"	""	"1080"	"17"	"37.000"	"30.000"	"0.991730705408107"	"19"	"0.0001889"	"0.000539"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"788.45831"	"1575.90935"	"1575.90963"	"-0.18"	"-0.00014"	"6/96"	"6"	"96"	"575170.426147461"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"75.9180"	"25442"	"25442"	"25423"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.9"	""	"32.4"	""	"31.4"	""	"42.0"	""	"47.8"	"38.6"	""	"1089"	"32"	"37.000"	"30.000"	"0.0345937692393275"	"19"	"0.0001889"	"0.001028"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"788.45850"	"1575.90972"	"1575.90963"	"0.05"	"0.00004"	"9/96"	"9"	"96"	"593651.796447754"	"HCD"	"MS2"	"12.62794"	"24.6"	"100.000"	"75.9355"	"25397"	"25397"	"25377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.6"	""	"25.3"	""	"36.4"	""	"40.2"	""	"53.1"	"45.6"	""	"1087"	"40"	"37.000"	"30.000"	"0.00520234977748749"	"19"	"0.0001889"	"0.0003773"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAFGSIPIEFR"	"[K].iPAFGSIPIEFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"788.45874"	"1575.91020"	"1575.90963"	"0.36"	"0.00029"	"11/96"	"11"	"96"	"10032223.5286865"	"HCD"	"MS2"	"0"	"173.7"	"80.911"	"75.6120"	"25266"	"25266"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"239.2"	""	"263.8"	""	"240.8"	""	"259.5"	""	"303.0"	"341.2"	""	"1079"	"40"	"37.000"	"30.000"	"0.0051403353049076"	"20"	"0"	"1.54E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SKEYFSK"	"[K].skEYFSk.[Q]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"525.98273"	"1575.93363"	"1575.93496"	"-0.84"	"-0.00044"	"6/68"	"6"	"68"	"19661793.6314087"	"HCD"	"MS2"	"17.36302"	"1438.0"	"100.000"	"32.4150"	"7720"	"7720"	"7702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2846.6"	""	"2047.6"	""	"2209.4"	""	"2122.8"	""	"2111.7"	"2235.8"	""	"898"	"4"	"36.000"	"29.000"	"19.4646384396"	"13"	"0.002829"	"0.0485"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SKQYFSK"	"[].skqYFSk.[]"	"N-Term(TMT6plex); K2(TMT6plex); Q3(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"525.98273"	"1575.93363"	"1575.93496"	"-0.84"	"-0.00044"	"6/68"	"6"	"68"	"19661793.6314087"	"HCD"	"MS2"	"17.36302"	"1438.0"	"100.000"	"32.4150"	"7720"	"7720"	"7702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2846.6"	""	"2047.6"	""	"2209.4"	""	"2122.8"	""	"2111.7"	"2235.8"	""	"898"	"4"	"36.000"	"29.000"	"19.4646384396"	"13"	"0.002829"	"0.04851"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SKEYFSK"	"[K].skEYFSk.[Q]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"525.98291"	"1575.93418"	"1575.93496"	"-0.49"	"-0.00026"	"6/68"	"6"	"68"	"15200190.5776978"	"HCD"	"MS2"	"27.63612"	"1157.3"	"100.000"	"32.2950"	"7628"	"7628"	"7608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2280.9"	""	"1610.3"	""	"1820.1"	""	"1690.7"	""	"1699.3"	"1828.1"	""	"915"	"4"	"36.000"	"29.000"	"17.8809709825024"	"13"	"0.002829"	"0.04615"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SKQYFSK"	"[].skqYFSk.[]"	"N-Term(TMT6plex); K2(TMT6plex); Q3(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"525.98291"	"1575.93418"	"1575.93496"	"-0.49"	"-0.00026"	"6/68"	"6"	"68"	"15200190.5776978"	"HCD"	"MS2"	"27.63612"	"1157.3"	"100.000"	"32.2950"	"7628"	"7628"	"7608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2280.9"	""	"1610.3"	""	"1820.1"	""	"1690.7"	""	"1699.3"	"1828.1"	""	"915"	"4"	"36.000"	"29.000"	"17.8809709825024"	"13"	"0.002829"	"0.04616"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADYIPQLAK"	"[K].vADYIPQLAk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"525.98859"	"1575.95121"	"1575.95105"	"0.10"	"0.00005"	"9/78"	"9"	"78"	"4514556.53234863"	"HCD"	"MS2"	"11.52318"	"124.3"	"100.000"	"57.2091"	"17764"	"17764"	"17739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.2"	""	"171.3"	""	"178.1"	""	"198.8"	""	"222.6"	"241.6"	""	"721"	"24"	"35.000"	"28.000"	"0.159186146270869"	"18"	"0.0001889"	"0.0009744"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADYIPQLAK"	"[K].vADYIPQLAk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"788.47968"	"1575.95207"	"1575.95105"	"0.65"	"0.00051"	"14/78"	"14"	"78"	"2044622.39562988"	"HCD"	"MS2"	"0"	"142.8"	"100.000"	"57.4197"	"17904"	"17904"	"17877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.3"	""	"206.7"	""	"209.7"	""	"210.7"	"0.6"	"253.9"	"256.6"	""	"724"	"46"	"35.000"	"28.000"	"0.000898894184116998"	"26"	"0"	"4.607E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADYIPQLAK"	"[K].vADYIPQLAk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"525.98889"	"1575.95212"	"1575.95105"	"0.68"	"0.00036"	"9/78"	"9"	"78"	"4719515.66717529"	"HCD"	"MS2"	"23.88737"	"128.1"	"100.000"	"57.4083"	"17899"	"17899"	"17877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.5"	""	"179.0"	""	"183.8"	""	"208.1"	""	"237.2"	"239.9"	""	"724"	"25"	"35.000"	"28.000"	"0.118770496106949"	"18"	"0.0002277"	"0.001225"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADYIPQLAK"	"[K].vADYIPQLAk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"788.47992"	"1575.95256"	"1575.95105"	"0.96"	"0.00076"	"16/78"	"16"	"78"	"1790903.59936523"	"HCD"	"MS2"	"0"	"134.0"	"100.000"	"57.2552"	"17783"	"17783"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.1"	""	"184.7"	""	"193.9"	""	"206.2"	"0.5"	"230.8"	"259.1"	""	"715"	"40"	"35.000"	"28.000"	"0.00393800303161056"	"22"	"0"	"3.073E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMLGLDAAGK"	"[R].iLmLGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.98950"	"1575.95395"	"1575.95442"	"-0.30"	"-0.00016"	"12/80"	"12"	"80"	"1530872.57714844"	"HCD"	"MS2"	"10.80974"	"53.0"	"100.000"	"62.4224"	"19889"	"19889"	"19865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.1"	""	"64.0"	""	"63.7"	""	"105.9"	"0.4"	"117.1"	"97.0"	""	"666"	"42"	"35.000"	"28.000"	"0.00222046654148136"	"15"	"7.476E-05"	"0.0001948"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMLGLDAAGK"	"[R].iLmLGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"525.98962"	"1575.95432"	"1575.95442"	"-0.07"	"-0.00003"	"11/80"	"11"	"80"	"1811772.48974609"	"HCD"	"MS2"	"13.17997"	"59.5"	"100.000"	"62.5637"	"20000"	"20000"	"19971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.4"	""	"59.5"	""	"68.3"	""	"136.1"	"1.3"	"115.2"	"115.0"	""	"667"	"45"	"35.000"	"28.000"	"0.00112744622874695"	"22"	"0"	"0.0001112"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMLGLDAAGK"	"[R].iLmLGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"788.48126"	"1575.95525"	"1575.95442"	"0.52"	"0.00041"	"10/80"	"10"	"80"	"910180.322265625"	"HCD"	"MS2"	"36.37832"	"67.2"	"100.000"	"62.1324"	"19824"	"19824"	"19795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.0"	""	"67.8"	""	"104.4"	""	"151.7"	""	"126.6"	"117.8"	""	"669"	"45"	"35.000"	"28.000"	"0.00095586403675892"	"25"	"0.0001889"	"0.0003946"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILMLGLDAAGK"	"[R].iLmLGLDAAGk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"788.48212"	"1575.95696"	"1575.95442"	"1.61"	"0.00127"	"9/80"	"9"	"80"	"945280.182556152"	"HCD"	"MS2"	"42.16742"	"69.5"	"100.000"	"61.9664"	"19703"	"19703"	"19673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.5"	""	"74.1"	""	"93.6"	""	"167.4"	"0.1"	"133.7"	"118.6"	""	"667"	"41"	"35.000"	"28.000"	"0.00292479773851402"	"18"	"0.0001889"	"0.0006951"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPLTAATLFK"	"[K].rPLTAATLFk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.00439"	"1575.99863"	"1575.99867"	"-0.02"	"-0.00001"	"6/96"	"6"	"96"	"4794251.33349609"	"HCD"	"MS2"	"55.39742"	"256.3"	"100.000"	"41.2287"	"11322"	"11322"	"11293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.6"	""	"326.8"	""	"394.5"	""	"390.1"	"1.0"	"485.4"	"488.0"	""	"431"	"3"	"33.000"	"26.000"	"11.3618035136618"	"13"	"0.0003839"	"0.002073"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDWDLLEK"	"[R].sIDWDLLEk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09217"	"Protein kinase C zeta type OS=Rattus norvegicus OX=10116 GN=Prkcz PE=1 SV=2"	"P09217"	"Protein kinase C zeta type OS=Rattus norvegicus OX=10116 GN=Prkcz PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"788.95264"	"1576.89800"	"1576.89868"	"-0.43"	"-0.00034"	"7/78"	"7"	"78"	"1120254.012146"	"HCD"	"MS2"	"24.48572"	"84.1"	"100.000"	"68.0422"	"22176"	"22176"	"22154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.2"	""	"108.4"	""	"106.2"	""	"137.3"	""	"175.3"	"163.5"	""	"1022"	"27"	"37.000"	"30.000"	"0.105784222923222"	"20"	"0.000523"	"0.003288"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADTLWGIQK"	"[K].sADTLWGIQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"788.95618"	"1576.90508"	"1576.90991"	"-3.07"	"-0.00242"	"16/80"	"16"	"80"	"7239012.53863525"	"HCD"	"MS2"	"0"	"583.6"	"100.000"	"50.1751"	"14961"	"14961"	"14942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"978.4"	""	"795.3"	""	"854.4"	""	"900.6"	""	"934.1"	"1056.3"	""	"987"	"53"	"36.000"	"29.000"	"0.000254851478235767"	"28"	"0"	"8.098E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADTLWGIQK"	"[K].sADTLWGIQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"788.95630"	"1576.90532"	"1576.90991"	"-2.91"	"-0.00230"	"16/80"	"16"	"80"	"3213266.42590332"	"HCD"	"MS2"	"0"	"253.0"	"100.000"	"50.4708"	"15080"	"15080"	"15064"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"423.6"	""	"347.0"	""	"375.8"	""	"356.1"	""	"412.2"	"479.9"	""	"987"	"55"	"36.000"	"29.000"	"0.000172697939928494"	"29"	"0"	"5.027E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADTLWGIQK"	"[K].sADTLWGIQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"788.95679"	"1576.90630"	"1576.90991"	"-2.29"	"-0.00181"	"16/80"	"16"	"80"	"7620421.01843262"	"HCD"	"MS2"	"0"	"611.0"	"100.000"	"49.9494"	"14821"	"14821"	"14809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1009.1"	""	"832.1"	""	"923.1"	""	"910.0"	""	"1007.6"	"1098.6"	""	"994"	"57"	"36.000"	"29.000"	"0.000100312808274974"	""	"0"	"6.159E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADTLWGIQK"	"[K].sADTLWGIQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"3"	"526.30701"	"1576.90647"	"1576.90991"	"-2.19"	"-0.00115"	"6/80"	"6"	"80"	"5484362.2713623"	"HCD"	"MS2"	"24.41045"	"204.4"	"100.000"	"50.5507"	"15113"	"15113"	"15092"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.9"	""	"289.8"	""	"310.0"	""	"343.3"	""	"371.7"	"354.8"	""	"994"	"8"	"36.000"	"29.000"	"7.53974032627291"	"18"	"0.0001889"	"0.0006629"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADTLWGIQK"	"[K].sADTLWGIQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.7111"	"0.0000"	"1"	"1"	"1"	"526.30707"	"1576.90665"	"1576.90991"	"-2.07"	"-0.00109"	"15/80"	"15"	"80"	"14952508.3217773"	"HCD"	"MS2"	"0"	"222.8"	"55.149"	"50.2186"	"14979"	"14979"	"14958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"349.3"	""	"293.8"	""	"328.1"	""	"332.4"	"0.7"	"389.2"	"415.6"	""	"994"	"45"	"36.000"	"29.000"	"0.00140720182191229"	"28"	"7.476E-05"	"0.0001951"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADTLWGIQK"	"[K].sADTLWGIQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.6222"	"0.0000"	"1"	"1"	"1"	"526.30750"	"1576.90793"	"1576.90991"	"-1.26"	"-0.00066"	"15/80"	"15"	"80"	"12390614.6220703"	"HCD"	"MS2"	"0"	"330.2"	"100.000"	"50.0205"	"14850"	"14850"	"14840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"530.9"	""	"435.8"	""	"471.6"	"3.4"	"500.5"	"0.8"	"588.1"	"594.6"	""	"983"	"45"	"36.000"	"29.000"	"0.00139805263431065"	""	"0"	"0.000112"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADTLWGIQK"	"[K].sADTLWGIQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"788.95770"	"1576.90813"	"1576.90991"	"-1.13"	"-0.00089"	"16/80"	"16"	"80"	"6824950.36706543"	"HCD"	"MS2"	"0"	"549.6"	"100.000"	"49.8865"	"14844"	"14844"	"14814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"926.0"	""	"776.1"	""	"841.3"	""	"819.5"	"0.8"	"867.2"	"965.0"	""	"982"	"54"	"36.000"	"29.000"	"0.00018033560954456"	"28"	"0"	"6.15E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADTLWGIQK"	"[K].sADTLWGIQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"788.95801"	"1576.90874"	"1576.90991"	"-0.74"	"-0.00059"	"16/80"	"16"	"80"	"5918617.77081299"	"HCD"	"MS2"	"4.683626"	"488.6"	"100.000"	"49.6481"	"14700"	"14700"	"14671"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"818.4"	""	"699.5"	""	"717.5"	""	"750.9"	"2.7"	"802.0"	"828.6"	""	"981"	"54"	"36.000"	"29.000"	"0.000174437161758087"	"29"	"0"	"7.79E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKPEFLK"	"[K].qkPEFLk.[T]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.33881"	"1577.00187"	"1577.00298"	"-0.70"	"-0.00037"	"8/60"	"8"	"60"	"23730933.3508301"	"HCD"	"MS2"	"9.721707"	"456.8"	"27.930"	"35.9530"	"9116"	"9116"	"9099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"728.2"	""	"566.4"	""	"626.3"	""	"732.7"	""	"884.4"	"789.9"	""	"372"	"3"	"32.000"	"25.000"	"9.5392217422394"	"13"	"0.003698"	"0.08516"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFSVEGQLEFR"	"[K].hFSVEGQLEFR.[A]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.61310"	"1577.82474"	"1577.82736"	"-1.66"	"-0.00087"	"6/100"	"6"	"100"	"9042600.2074585"	"HCD"	"MS2"	"60.46859"	"261.6"	"73.059"	"40.2148"	"10862"	"10862"	"10837"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.8"	""	"401.5"	""	"372.9"	""	"399.7"	"3.7"	"478.4"	"456.0"	""	"993"	"13"	"36.000"	"29.000"	"2.49413095697865"	"13"	"7.476E-05"	"0.0001895"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFSVEGQLEFR"	"[K].hFSVEGQLEFR.[A]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.61334"	"1577.82547"	"1577.82736"	"-1.19"	"-0.00063"	"6/100"	"6"	"100"	"8660415.20349121"	"HCD"	"MS2"	"60.3029"	"249.3"	"79.384"	"40.3540"	"10963"	"10963"	"10941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.0"	""	"387.9"	""	"379.5"	""	"384.3"	"1.6"	"455.2"	"425.5"	""	"994"	"19"	"36.000"	"29.000"	"0.565400761054245"	"14"	"0"	"0.000146"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDMDSIIAEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"789.42395"	"1577.84062"	"1577.84062"	"0.00"	"0.00000"	"10/106"	"10"	"106"	"703928.471923828"	"HCD"	"MS2"	"0"	"52.5"	"100.000"	"67.4943"	"21954"	"21954"	"21929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.1"	""	"76.6"	""	"77.0"	""	"73.3"	""	"89.6"	"104.0"	""	"1073"	"71"	"37.000"	"30.000"	"4.78156128308754E-06"	"24"	"0"	"1.329E-05"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDMDSIIAEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"789.42413"	"1577.84099"	"1577.84062"	"0.23"	"0.00018"	"9/106"	"9"	"106"	"680212.170471191"	"HCD"	"MS2"	"0"	"52.7"	"100.000"	"67.3787"	"21957"	"21957"	"21938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.8"	""	"62.7"	""	"89.3"	""	"69.0"	""	"90.1"	"102.3"	""	"1073"	"59"	"37.000"	"30.000"	"6.08933302608197E-05"	"21"	"0"	"4.166E-06"	"1.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADTLWGIQK"	"[K].sADTLWGIqk.[E]"	"N-Term(TMT6plex); Q9(Deamidated); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"789.45844"	"1577.90959"	"1577.89393"	"9.93"	"0.00783"	"9/80"	"9"	"80"	"3705122.30975342"	"HCD"	"MS2"	"0"	"308.7"	"100.000"	"50.2174"	"14927"	"14927"	"14918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"471.2"	""	"408.7"	""	"469.5"	""	"460.0"	""	"537.2"	"583.2"	""	"923"	"40"	"36.000"	"29.000"	"0.00468998771759826"	"25"	"0.000494"	"0.002717"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNEVISLWK"	"[R].mNEVISLWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"526.64148"	"1577.90989"	"1577.91256"	"-1.69"	"-0.00089"	"6/84"	"6"	"84"	"3974456.81176758"	"HCD"	"MS2"	"9.043723"	"104.8"	"100.000"	"68.4872"	"22358"	"22358"	"22330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.8"	""	"148.6"	""	"153.7"	""	"125.6"	""	"182.9"	"228.7"	""	"913"	"38"	"36.000"	"29.000"	"0.00667483880139491"	""	"0.0001889"	"0.0004724"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"526.64185"	"1577.91098"	"1577.91256"	"-1.00"	"-0.00052"	"5/82"	"5"	"82"	"3073360.90899658"	"HCD"	"MS2"	"18.94204"	"98.0"	"100.000"	"52.6067"	"15904"	"15904"	"15874"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.3"	""	"132.1"	""	"148.8"	""	"155.5"	"16.2"	"158.6"	"183.3"	""	"913"	"6"	"36.000"	"29.000"	"10.7507999809853"	"15"	"0.001945"	"0.02758"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNEVISLWK"	"[R].mNEVISLWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"526.64209"	"1577.91172"	"1577.91256"	"-0.53"	"-0.00028"	"7/84"	"7"	"84"	"5141117.80712891"	"HCD"	"MS2"	"9.350545"	"129.1"	"100.000"	"68.3847"	"22367"	"22367"	"22346"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.3"	""	"179.3"	""	"183.0"	""	"173.7"	"2.1"	"226.5"	"274.5"	""	"894"	"35"	"36.000"	"29.000"	"0.0144646364647544"	"29"	"0.0001859"	"0.0003714"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.45953"	"1577.91179"	"1577.91256"	"-0.49"	"-0.00038"	"9/82"	"9"	"82"	"1289131.54962158"	"HCD"	"MS2"	"0"	"108.2"	"100.000"	"52.7913"	"16029"	"16029"	"16006"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.4"	""	"124.0"	""	"181.6"	""	"169.3"	"1.0"	"190.1"	"205.3"	""	"894"	"55"	"36.000"	"29.000"	"0.000157147516916149"	"16"	"0.0005564"	"0.003617"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"526.64215"	"1577.91190"	"1577.91256"	"-0.42"	"-0.00022"	"6/82"	"6"	"82"	"3330570.34893799"	"HCD"	"MS2"	"22.59639"	"103.2"	"100.000"	"52.7590"	"16016"	"16016"	"15990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.3"	""	"142.5"	""	"162.0"	"2.3"	"149.4"	"2.8"	"171.0"	"191.0"	""	"894"	"30"	"36.000"	"29.000"	"0.0462708548505667"	"17"	"0.0001859"	"0.0003238"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"789.45996"	"1577.91265"	"1577.91256"	"0.06"	"0.00004"	"9/82"	"9"	"82"	"1217961.53167725"	"HCD"	"MS2"	"0"	"105.5"	"100.000"	"52.5975"	"15900"	"15900"	"15874"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.4"	""	"147.2"	""	"158.2"	""	"176.6"	""	"177.1"	"187.6"	""	"893"	"43"	"36.000"	"29.000"	"0.00231111450465928"	"19"	"0.0009404"	"0.01018"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.46008"	"1577.91289"	"1577.91256"	"0.21"	"0.00017"	"9/82"	"9"	"82"	"1531023.52630615"	"HCD"	"MS2"	"17.79234"	"125.0"	"100.000"	"52.2847"	"15772"	"15772"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.8"	""	"169.6"	""	"181.8"	""	"205.6"	"1.5"	"230.2"	"219.7"	""	"893"	"51"	"36.000"	"29.000"	"0.000378287040413776"	"16"	"0.0007793"	"0.00722"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTLGLGTWK"	"[K].mPTLGLGTWk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.46075"	"1577.91423"	"1577.91256"	"1.06"	"0.00084"	"9/82"	"9"	"82"	"1663573.88348389"	"HCD"	"MS2"	"6.952548"	"132.2"	"100.000"	"52.4852"	"15904"	"15904"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.8"	""	"190.5"	""	"184.8"	""	"217.9"	"0.9"	"226.9"	"242.4"	""	"917"	"41"	"36.000"	"29.000"	"0.00329867356414697"	"16"	"0.0009404"	"0.009812"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGVTINYK"	"[K].lPDGVTINYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"789.46747"	"1577.92766"	"1577.93031"	"-1.68"	"-0.00133"	"15/82"	"15"	"82"	"6345870.84118652"	"HCD"	"MS2"	"0"	"395.1"	"100.000"	"50.6790"	"15165"	"15165"	"15146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"454.1"	""	"540.3"	""	"484.2"	""	"666.9"	""	"795.7"	"811.0"	""	"816"	"53"	"36.000"	"29.000"	"0.000227855839452627"	"17"	"0"	"7.644E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGVTINYK"	"[K].lPDGVTINYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.46783"	"1577.92839"	"1577.93031"	"-1.22"	"-0.00096"	"7/82"	"7"	"82"	"1695638.89758301"	"HCD"	"MS2"	"0"	"136.8"	"100.000"	"50.9913"	"15293"	"15293"	"15270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.8"	""	"178.5"	""	"190.7"	""	"220.4"	""	"267.0"	"264.0"	""	"817"	"11"	"36.000"	"29.000"	"3.43709915362062"	"13"	"0.0006037"	"0.004822"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGVTINYK"	"[K].lPDGVTINYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.64771"	"1577.92856"	"1577.93031"	"-1.11"	"-0.00058"	"7/82"	"7"	"82"	"13176739.3815918"	"HCD"	"MS2"	"44.80747"	"320.6"	"64.145"	"50.8581"	"15239"	"15239"	"15222"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"395.7"	""	"476.7"	""	"473.4"	""	"481.4"	""	"578.5"	"635.0"	""	"817"	"34"	"36.000"	"29.000"	"0.0148659292257964"	"15"	"0.0001889"	"0.0003984"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGVTINYK"	"[K].lPDGVTINYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.46802"	"1577.92876"	"1577.93031"	"-0.99"	"-0.00078"	"8/82"	"8"	"82"	"2102720.37878418"	"HCD"	"MS2"	"0"	"160.8"	"100.000"	"50.7403"	"15140"	"15140"	"15122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.7"	"3.2"	"222.5"	""	"217.6"	""	"255.6"	""	"318.6"	"322.2"	""	"825"	"11"	"36.000"	"29.000"	"3.10759170040158"	"13"	"0.0001889"	"0.0008697"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGVTINYK"	"[K].lPDGVTINYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"789.46808"	"1577.92888"	"1577.93031"	"-0.91"	"-0.00072"	"16/82"	"16"	"82"	"5420372.90045166"	"HCD"	"MS2"	"0"	"358.8"	"100.000"	"50.4445"	"15019"	"15019"	"14999"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"423.1"	""	"480.0"	""	"453.3"	""	"613.4"	"4.0"	"707.5"	"724.4"	""	"805"	"56"	"36.000"	"29.000"	"0.00010734106124699"	"17"	"0"	"6.622E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVINLAAEK"	"[K].fDVINLAAEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P80385"	"5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Prkag1 PE=1 SV=3"	"P80385"	"5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Prkag1 PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"789.46857"	"1577.92986"	"1577.93031"	"-0.29"	"-0.00023"	"9/96"	"9"	"96"	"1652685.90905762"	"HCD"	"MS2"	"52.83047"	"145.7"	"100.000"	"63.5035"	"20384"	"20384"	"20355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.1"	""	"197.2"	""	"199.2"	""	"248.4"	""	"257.2"	"270.9"	""	"802"	"34"	"36.000"	"29.000"	"0.0171058387039438"	"20"	"0"	"7.549E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGVTINYK"	"[K].lPDGVTINYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"526.64819"	"1577.93003"	"1577.93031"	"-0.18"	"-0.00010"	"7/82"	"7"	"82"	"11607851.0079346"	"HCD"	"MS2"	"19.14248"	"372.2"	"100.000"	"50.4721"	"15030"	"15030"	"15015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"427.8"	""	"547.4"	""	"531.7"	""	"588.1"	""	"733.7"	"709.2"	""	"802"	"38"	"36.000"	"29.000"	"0.00570353843636251"	"16"	"0.0001859"	"0.0003282"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGPSLMPGGNK"	"[R].yGPSLMPGGNk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"526.96191"	"1578.87119"	"1578.87142"	"-0.15"	"-0.00008"	"10/82"	"10"	"82"	"13001619.3675537"	"HCD"	"MS2"	"38.3137"	"402.2"	"100.000"	"40.5451"	"11041"	"11041"	"11021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"669.5"	""	"599.4"	""	"608.8"	""	"432.7"	""	"698.5"	"799.2"	""	"1085"	"30"	"37.000"	"30.000"	"0.0521674661023138"	"16"	"0.0001889"	"0.000999"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGPSLMPGGNK"	"[R].yGPSLMPGGNk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"789.93939"	"1578.87151"	"1578.87142"	"0.06"	"0.00004"	"10/82"	"10"	"82"	"6559640.56262207"	"HCD"	"MS2"	"0"	"444.9"	"100.000"	"40.5401"	"11039"	"11039"	"11021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"843.3"	""	"660.7"	""	"645.0"	""	"369.7"	"4.2"	"781.1"	"906.9"	""	"1064"	"60"	"37.000"	"30.000"	"5.163113025746E-05"	"22"	"0"	"3.852E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGPSLMPGGNK"	"[R].yGPSLMPGGNk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"526.96222"	"1578.87210"	"1578.87142"	"0.43"	"0.00023"	"11/82"	"11"	"82"	"13405887.8892822"	"HCD"	"MS2"	"40.83965"	"268.1"	"58.509"	"40.3711"	"10926"	"10926"	"10901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"449.8"	""	"394.3"	""	"413.9"	""	"298.7"	""	"471.1"	"514.7"	""	"1065"	"30"	"37.000"	"30.000"	"0.0501556210148413"	"22"	"0.0003146"	"0.001434"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGPSLMPGGNK"	"[R].yGPSLMPGGNk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"789.94000"	"1578.87273"	"1578.87142"	"0.83"	"0.00065"	"10/82"	"10"	"82"	"5807232.22601318"	"HCD"	"MS2"	"0"	"396.4"	"100.000"	"40.3642"	"10923"	"10923"	"10901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"761.2"	""	"599.5"	""	"594.5"	""	"342.1"	"2.5"	"683.2"	"767.2"	""	"1094"	"58"	"37.000"	"30.000"	"8.03502673871196E-05"	"23"	"0"	"2.265E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQYAIISEAWR"	"[R].lQYAIISEAWR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"789.94421"	"1578.88115"	"1578.88414"	"-1.90"	"-0.00150"	"9/100"	"9"	"100"	"1703113.68505859"	"HCD"	"MS2"	"0"	"99.5"	"100.000"	"66.5630"	"21633"	"21633"	"21603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.1"	""	"168.3"	""	"167.8"	""	"148.4"	"1.0"	"144.6"	"168.9"	""	"1054"	"62"	"37.000"	"30.000"	"3.7308742837044E-05"	""	"0"	"9.132E-06"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQYAIISEAWR"	"[R].lQYAIISEAWR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7705"	"0.0000"	"1"	"1"	"1"	"789.94623"	"1578.88518"	"1578.88414"	"0.66"	"0.00052"	"10/100"	"10"	"100"	"1395400.26605225"	"HCD"	"MS2"	"0"	"86.0"	"100.000"	"66.6168"	"21602"	"21602"	"21577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.7"	""	"141.6"	""	"140.1"	""	"130.1"	""	"125.9"	"152.3"	""	"1057"	"61"	"37.000"	"30.000"	"4.50863410258296E-05"	"30"	"0"	"1.117E-05"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSVWPFEK"	"[R].iDSVWPFEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"526.96704"	"1578.88657"	"1578.89320"	"-4.20"	"-0.00221"	"9/76"	"9"	"76"	"11587164.5617065"	"HCD"	"MS2"	"40.35036"	"256.7"	"100.000"	"68.4677"	"22401"	"22401"	"22378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"363.7"	""	"360.8"	""	"396.6"	""	"360.7"	""	"436.1"	"516.2"	""	"1058"	"30"	"37.000"	"30.000"	"0.0561636949758125"	"22"	"0.0001889"	"0.0005435"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSVWPFEK"	"[R].iDSVWPFEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"526.96710"	"1578.88675"	"1578.89320"	"-4.08"	"-0.00215"	"9/76"	"9"	"76"	"11163336.59375"	"HCD"	"MS2"	"44.07244"	"253.3"	"100.000"	"68.5957"	"22402"	"22402"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.9"	""	"391.2"	""	"356.2"	""	"372.5"	""	"431.3"	"477.7"	""	"1056"	"28"	"37.000"	"30.000"	"0.0786382649031363"	"21"	"0.0001889"	"0.0009133"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSVWPFEK"	"[R].iDSVWPFEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"789.94934"	"1578.89141"	"1578.89320"	"-1.14"	"-0.00090"	"6/76"	"6"	"76"	"17543653.5491333"	"HCD"	"MS2"	"1.902235"	"920.3"	"80.704"	"68.4908"	"22411"	"22411"	"22394"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1381.4"	""	"1368.2"	""	"1350.8"	""	"1301.2"	"12.1"	"1563.6"	"1734.0"	""	"1019"	"43"	"37.000"	"30.000"	"0.00237216114649948"	"22"	"0.0001859"	"0.0003462"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSVWPFEK"	"[R].iDSVWPFEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"526.96899"	"1578.89243"	"1578.89320"	"-0.49"	"-0.00026"	"9/76"	"9"	"76"	"8445664.40246582"	"HCD"	"MS2"	"4.946773"	"173.5"	"89.812"	"68.8910"	"22523"	"22523"	"22506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.6"	""	"240.1"	""	"271.2"	""	"259.9"	""	"289.7"	"338.3"	""	"1021"	"30"	"37.000"	"30.000"	"0.0477524596652326"	"22"	"0.0001889"	"0.0009224"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSVWPFEK"	"[R].iDSVWPFEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"789.94995"	"1578.89263"	"1578.89320"	"-0.36"	"-0.00029"	"6/76"	"6"	"76"	"15683039.8148804"	"HCD"	"MS2"	"3.463606"	"1094.4"	"100.000"	"68.6209"	"22412"	"22412"	"22394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1657.2"	""	"1593.4"	""	"1635.0"	""	"1569.6"	"1.6"	"1835.1"	"2066.4"	""	"997"	"43"	"36.000"	"29.000"	"0.00240804812816827"	"22"	"0.0001308"	"0.0002683"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSVWPFEK"	"[R].iDSVWPFEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"526.96924"	"1578.89316"	"1578.89320"	"-0.02"	"-0.00001"	"9/76"	"9"	"76"	"7808697.51000977"	"HCD"	"MS2"	"3.909443"	"172.4"	"100.000"	"68.7694"	"22524"	"22524"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"249.5"	""	"247.5"	""	"257.5"	""	"256.3"	"1.4"	"291.7"	"328.2"	""	"996"	"29"	"36.000"	"29.000"	"0.0665624567240129"	"21"	"0.0001889"	"0.0006815"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSVWPFEK"	"[R].iDSVWPFEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"789.95044"	"1578.89360"	"1578.89320"	"0.25"	"0.00020"	"6/76"	"6"	"76"	"8303251.0201416"	"HCD"	"MS2"	"1.616289"	"412.8"	"73.651"	"68.9302"	"22539"	"22539"	"22522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"589.8"	""	"579.4"	""	"618.3"	""	"568.0"	""	"717.3"	"839.2"	""	"986"	"41"	"36.000"	"29.000"	"0.00409116428384611"	"22"	"0.0001308"	"0.0002326"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSVWPFEK"	"[R].iDSVWPFEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"789.95111"	"1578.89495"	"1578.89320"	"1.10"	"0.00087"	"6/76"	"6"	"76"	"7605346.70855713"	"HCD"	"MS2"	"1.562731"	"471.3"	"96.728"	"68.8042"	"22539"	"22539"	"22522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"705.5"	""	"622.3"	""	"707.1"	""	"697.0"	""	"817.5"	"913.7"	""	"991"	"41"	"36.000"	"29.000"	"0.00405549302520788"	"22"	"0.0001308"	"0.0002666"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLLLDYEAK"	"[K].vGLLLDYEAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4FZT8"	"SPRY domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Spryd4 PE=2 SV=1"	"Q4FZT8"	"SPRY domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Spryd4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.96460"	"1578.92192"	"1578.95072"	"-18.24"	"-0.01440"	"8/76"	"8"	"76"	"1170845.85528564"	"HCD"	"MS2"	"34.15903"	"99.9"	"100.000"	"63.2998"	"20248"	"20248"	"20217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.5"	""	"129.0"	""	"153.3"	""	"170.6"	""	"186.0"	"171.0"	""	"851"	"18"	"36.000"	"29.000"	"0.756657888971562"	"14"	"0.0001889"	"0.0006728"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTTGHLIYK"	"[K].sTTTGHLIYk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.97961"	"1578.92429"	"1578.92556"	"-0.81"	"-0.00042"	"8/78"	"8"	"78"	"11275123.7415771"	"HCD"	"MS2"	"26.59714"	"602.1"	"100.000"	"31.4426"	"7322"	"7322"	"7296"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"930.6"	""	"961.1"	""	"932.5"	""	"746.4"	""	"996.6"	"1136.6"	""	"783"	"7"	"35.000"	"28.000"	"8.46704302039128"	"13"	"0.0001889"	"0.0005107"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTTGHLIYK"	"[K].sTTTGHLIYk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"789.96582"	"1578.92436"	"1578.92556"	"-0.76"	"-0.00060"	"9/78"	"9"	"78"	"997759.000976563"	"HCD"	"MS2"	"0"	"73.7"	"100.000"	"31.0595"	"7123"	"7123"	"7094"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.9"	""	"95.3"	""	"89.5"	""	"124.2"	"2.2"	"147.3"	"142.4"	""	"783"	"65"	"35.000"	"28.000"	"1.32352383374642E-05"	""	"0"	"8.537E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTTGHLIYK"	"[K].sTTTGHLIYk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"526.97968"	"1578.92447"	"1578.92556"	"-0.69"	"-0.00036"	"15/78"	"15"	"78"	"55580296.2860107"	"HCD"	"MS2"	"3.704769"	"624.8"	"42.149"	"31.1123"	"7186"	"7186"	"7168"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"847.1"	""	"805.6"	""	"768.9"	""	"1081.2"	"5.3"	"1210.8"	"1206.8"	""	"783"	"45"	"35.000"	"28.000"	"0.00115274106963221"	"22"	"0"	"8.194E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTTGHLIYK"	"[K].sTTTGHLIYk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.97974"	"1578.92466"	"1578.92556"	"-0.58"	"-0.00030"	"12/78"	"12"	"78"	"10847450.9325562"	"HCD"	"MS2"	"26.61698"	"605.2"	"100.000"	"31.3237"	"7231"	"7231"	"7206"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"879.8"	""	"931.1"	""	"950.7"	""	"787.1"	""	"1007.2"	"1187.2"	""	"782"	"10"	"35.000"	"28.000"	"4.21868168391863"	"13"	"0.0002277"	"0.001324"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTTGHLIYK"	"[K].sTTTGHLIYk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"526.97992"	"1578.92521"	"1578.92556"	"-0.23"	"-0.00012"	"9/78"	"9"	"78"	"37495092.3388062"	"HCD"	"MS2"	"8.021581"	"923.2"	"94.318"	"31.0001"	"7098"	"7098"	"7080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1223.6"	""	"1182.3"	""	"1127.8"	""	"1596.2"	"0.4"	"1811.9"	"1815.5"	""	"781"	"45"	"35.000"	"28.000"	"0.0011604355853937"	"24"	"0"	"1.824E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTTGHLIYK"	"[K].sTTTGHLIYk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"789.96655"	"1578.92583"	"1578.92556"	"0.17"	"0.00013"	"13/78"	"13"	"78"	"296997.057983398"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"31.2474"	"7242"	"7242"	"7216"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.6"	""	"30.5"	""	"24.3"	""	"38.9"	"0.3"	"46.7"	"53.2"	""	"739"	"45"	"35.000"	"28.000"	"0.00124055048462772"	"26"	"0"	"4.9E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLMANGQLVk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"789.97473"	"1578.94219"	"1578.94419"	"-1.27"	"-0.00100"	"9/84"	"9"	"84"	"2526490.5770874"	"HCD"	"MS2"	"33.10908"	"193.7"	"100.000"	"54.6290"	"16709"	"16709"	"16688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"331.0"	""	"331.7"	""	"311.8"	""	"186.2"	""	"319.2"	"351.7"	""	"684"	"43"	"35.000"	"28.000"	"0.00155605916571316"	"17"	"0"	"6.106E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLMANGQLVk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"526.98566"	"1578.94242"	"1578.94419"	"-1.12"	"-0.00059"	"7/84"	"7"	"84"	"3719176.72973633"	"HCD"	"MS2"	"9.719515"	"118.5"	"100.000"	"54.9086"	"16877"	"16877"	"16853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.6"	""	"195.8"	""	"187.2"	""	"126.8"	""	"200.4"	"233.1"	""	"682"	"28"	"35.000"	"28.000"	"0.0591227163234161"	"25"	"0.0001889"	"0.0007543"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLMANGQLVk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"789.97504"	"1578.94280"	"1578.94419"	"-0.88"	"-0.00070"	"9/84"	"9"	"84"	"2572795.23773193"	"HCD"	"MS2"	"38.46762"	"183.7"	"100.000"	"54.8217"	"16841"	"16841"	"16821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"304.1"	""	"314.6"	""	"298.2"	""	"180.4"	""	"295.4"	"346.0"	""	"673"	"43"	"35.000"	"28.000"	"0.00186202311751095"	"17"	"0"	"5.965E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLMANGQLVk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"789.97614"	"1578.94499"	"1578.94419"	"0.51"	"0.00040"	"16/84"	"16"	"84"	"887858.740905762"	"HCD"	"MS2"	"0"	"81.2"	"100.000"	"54.9253"	"16830"	"16830"	"16812"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.3"	""	"130.5"	""	"141.9"	""	"87.1"	""	"132.8"	"147.1"	""	"660"	"38"	"35.000"	"28.000"	"0.0053890714280513"	"21"	"0"	"4.19E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLMANGQLVk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"526.98657"	"1578.94516"	"1578.94419"	"0.62"	"0.00032"	"7/84"	"7"	"84"	"3612560.56951904"	"HCD"	"MS2"	"12.43894"	"114.4"	"100.000"	"54.7208"	"16747"	"16747"	"16720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.1"	""	"178.9"	""	"170.9"	""	"136.2"	""	"195.7"	"223.8"	""	"660"	"27"	"35.000"	"28.000"	"0.0705527489535736"	"25"	"0.0001889"	"0.0005298"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STWVILHHK"	"[K].sTWVILHHk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"4"	"4"	"0.9333"	"0.0000"	"1"	"1"	"1"	"395.49277"	"1578.94924"	"1578.95205"	"-1.78"	"-0.00070"	"8/66"	"8"	"66"	"15363862.628418"	"HCD"	"MS2"	"7.99605"	"435.8"	"100.000"	"33.7517"	"8218"	"8218"	"8189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"480.1"	""	"561.7"	""	"557.6"	""	"764.5"	"5.1"	"903.2"	"866.4"	""	"616"	"30"	"34.000"	"27.000"	"0.0327002231617207"	"16"	"0.0001308"	"0.0002761"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STWVILHHK"	"[K].sTWVILHHk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"4"	"4"	"0.6667"	"0.0000"	"1"	"1"	"1"	"395.49286"	"1578.94961"	"1578.95205"	"-1.55"	"-0.00061"	"8/66"	"8"	"66"	"13091029.6106567"	"HCD"	"MS2"	"33.06446"	"270.2"	"65.769"	"33.8457"	"8256"	"8256"	"8234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"287.1"	""	"323.9"	""	"336.4"	""	"494.0"	"0.4"	"569.6"	"555.8"	""	"614"	"18"	"34.000"	"27.000"	"0.493330964674953"	"19"	"0.0001308"	"0.0002837"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STWVILHHK"	"[K].sTWVILHHk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"4"	"4"	"0.7500"	"0.0000"	"1"	"1"	"1"	"395.49341"	"1578.95180"	"1578.95205"	"-0.16"	"-0.00006"	"9/66"	"9"	"66"	"11627059.635498"	"HCD"	"MS2"	"16.63664"	"324.9"	"100.000"	"33.7587"	"8264"	"8264"	"8237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"352.8"	"2.8"	"426.2"	""	"440.5"	""	"567.3"	"6.4"	"641.5"	"646.6"	""	"618"	"24"	"34.000"	"27.000"	"0.114014077958177"	"20"	"0.0001308"	"0.0002458"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSSVSMQLSHD"	"[R].iFSSVSMQLSHD.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"0"	"2"	"2"	"0.9831"	"0.0000"	"1"	"1"	"1"	"790.40234"	"1579.79741"	"1579.79876"	"-0.85"	"-0.00067"	"8/106"	"8"	"106"	"975703.662353516"	"HCD"	"MS2"	"0"	"72.0"	"100.000"	"57.7354"	"18033"	"18033"	"18005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.3"	""	"81.0"	""	"82.3"	""	"127.7"	"0.0"	"149.1"	"153.1"	""	"913"	"59"	"36.000"	"29.000"	"5.76024269540641E-05"	"18"	"0.0001889"	"0.0003847"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSSVSMQLSHD"	"[R].iFSSVSMQLSHD.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.40344"	"1579.79961"	"1579.79876"	"0.54"	"0.00042"	"6/106"	"6"	"106"	"1060696.35870361"	"HCD"	"MS2"	"12.80125"	"76.5"	"100.000"	"57.5249"	"17893"	"17893"	"17867"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.5"	""	"92.3"	""	"110.7"	""	"126.2"	""	"140.0"	"159.2"	""	"942"	"24"	"36.000"	"29.000"	"0.174189072676505"	"14"	"0.0004166"	"0.002195"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFDYWIGLHR"	"[K].gSFDYWIGLHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"527.27826"	"1579.82022"	"1579.82188"	"-1.05"	"-0.00055"	"12/84"	"12"	"84"	"9017413.49627686"	"HCD"	"MS2"	"6.738815"	"102.5"	"100.000"	"52.0568"	"15679"	"15679"	"15650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.9"	""	"132.7"	""	"126.8"	""	"172.8"	"3.3"	"205.8"	"222.7"	""	"1045"	"36"	"37.000"	"30.000"	"0.0133071880697569"	"16"	"0"	"0.0001456"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFDYWIGLHR"	"[K].gSFDYWIGLHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.27899"	"1579.82242"	"1579.82188"	"0.34"	"0.00018"	"10/84"	"10"	"84"	"9307490.98901367"	"HCD"	"MS2"	"23.36887"	"119.4"	"100.000"	"52.2548"	"15810"	"15810"	"15782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.9"	""	"136.3"	""	"138.2"	""	"236.8"	""	"239.1"	"261.5"	""	"1088"	"27"	"37.000"	"30.000"	"0.106316066394182"	"15"	"0.0001889"	"0.0004177"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].sSGSLLNNAMk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"790.44720"	"1579.88713"	"1579.88780"	"-0.42"	"-0.00033"	"9/94"	"9"	"94"	"1466040.48205566"	"HCD"	"MS2"	"0"	"140.2"	"100.000"	"38.9353"	"10341"	"10341"	"10310"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"287.0"	""	"248.0"	""	"200.4"	""	"173.5"	"0.3"	"187.0"	"225.9"	""	"996"	"56"	"36.000"	"29.000"	"0.000127711305018583"	"25"	"0"	"1E-05"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].sSGSLLNNAMk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"790.44745"	"1579.88762"	"1579.88780"	"-0.11"	"-0.00009"	"9/94"	"9"	"94"	"1625270.38446045"	"HCD"	"MS2"	"0"	"149.8"	"100.000"	"38.9962"	"10409"	"10409"	"10382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"317.1"	""	"279.4"	""	"236.1"	""	"197.6"	""	"177.7"	"204.4"	""	"1002"	"56"	"36.000"	"30.000"	"0.000118259959482347"	"25"	"0"	"9.519E-06"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].sSGSLLNNAMk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7937"	"0.0000"	"1"	"1"	"1"	"790.44745"	"1579.88762"	"1579.88780"	"-0.11"	"-0.00009"	"17/94"	"17"	"94"	"10504008.086731"	"HCD"	"MS2"	"0"	"852.3"	"100.000"	"38.6754"	"10277"	"10277"	"10257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2107.1"	""	"1513.1"	""	"1270.2"	""	"1152.1"	"5.4"	"923.5"	"1042.1"	""	"1002"	"63"	"36.000"	"30.000"	"2.29001182997052E-05"	"30"	"0"	"1.728E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].sSGSLLNNAMk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"790.44745"	"1579.88762"	"1579.88780"	"-0.11"	"-0.00009"	"10/94"	"10"	"94"	"13837132.2730713"	"HCD"	"MS2"	"0"	"1132.0"	"100.000"	"38.6056"	"10205"	"10205"	"10183"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2702.9"	""	"2043.9"	""	"1687.0"	""	"1512.2"	"5.1"	"1236.1"	"1460.4"	""	"1002"	"57"	"36.000"	"30.000"	"0.000105642270311658"	"25"	"0"	"3.04E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQDLLNVK"	"[RK].eYQDLLNVk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"6"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P16884; P23565; P19527; P48675; P31000; P12839"	"Neurofilament heavy polypeptide OS=Rattus norvegicus OX=10116 GN=Nefh PE=1 SV=4; Alpha-internexin OS=Rattus norvegicus OX=10116 GN=Ina PE=1 SV=2; Neurofilament light polypeptide OS=Rattus norvegicus OX=10116 GN=Nefl PE=1 SV=3; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Neurofilament medium polypeptide OS=Rattus norvegicus OX=10116 GN=Nefm PE=1 SV=4"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"790.45703"	"1579.90679"	"1579.90958"	"-1.77"	"-0.00140"	"8/82"	"8"	"82"	"3210290.04071045"	"HCD"	"MS2"	"73.03767"	"237.9"	"100.000"	"51.1800"	"15320"	"15320"	"15298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.6"	""	"378.2"	""	"324.0"	""	"329.2"	""	"412.4"	"471.5"	""	"871"	"28"	"36.000"	"29.000"	"0.0751602401961734"	"15"	"0.0001859"	"0.0003493"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQDLLNVK"	"[RK].eYQDLLNVk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"6"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P16884; P23565; P19527; P48675; P31000; P12839"	"Neurofilament heavy polypeptide OS=Rattus norvegicus OX=10116 GN=Nefh PE=1 SV=4; Alpha-internexin OS=Rattus norvegicus OX=10116 GN=Ina PE=1 SV=2; Neurofilament light polypeptide OS=Rattus norvegicus OX=10116 GN=Nefl PE=1 SV=3; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Neurofilament medium polypeptide OS=Rattus norvegicus OX=10116 GN=Nefm PE=1 SV=4"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"527.30713"	"1579.90683"	"1579.90958"	"-1.74"	"-0.00092"	"7/82"	"7"	"82"	"4697911.51989746"	"HCD"	"MS2"	"17.79837"	"140.1"	"100.000"	"51.4329"	"15474"	"15474"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.3"	""	"205.9"	""	"194.9"	""	"200.6"	"6.6"	"257.3"	"276.0"	""	"871"	"37"	"36.000"	"29.000"	"0.00957167974597791"	"22"	"0.0001889"	"0.0009091"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQDLLNVK"	"[RK].eYQDLLNVk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"6"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P16884; P23565; P19527; P48675; P31000; P12839"	"Neurofilament heavy polypeptide OS=Rattus norvegicus OX=10116 GN=Nefh PE=1 SV=4; Alpha-internexin OS=Rattus norvegicus OX=10116 GN=Ina PE=1 SV=2; Neurofilament light polypeptide OS=Rattus norvegicus OX=10116 GN=Nefl PE=1 SV=3; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Neurofilament medium polypeptide OS=Rattus norvegicus OX=10116 GN=Nefm PE=1 SV=4"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"790.45764"	"1579.90801"	"1579.90958"	"-1.00"	"-0.00079"	"8/82"	"8"	"82"	"2467429.06011963"	"HCD"	"MS2"	"16.65119"	"188.1"	"100.000"	"51.4237"	"15470"	"15470"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"273.7"	""	"272.3"	""	"267.8"	""	"256.2"	""	"327.6"	"387.7"	""	"846"	"46"	"36.000"	"29.000"	"0.000998482292635383"	"24"	"0"	"0.0001123"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLMAnGQLVk.[M]"	"N-Term(TMT6plex); N5(Deamidated); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.4400"	"0.0000"	"1"	"1"	"1"	"527.31342"	"1579.92569"	"1579.92821"	"-1.59"	"-0.00084"	"8/84"	"8"	"84"	"4632986.90911865"	"HCD"	"MS2"	"23.37735"	"135.7"	"100.000"	"58.0439"	"18159"	"18159"	"18133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.2"	""	"213.8"	""	"207.7"	""	"165.9"	""	"235.9"	"271.8"	""	"730"	"50"	"35.000"	"28.000"	"0.000388412201651875"	"26"	"0.0001859"	"0.0003411"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLMAnGQLVk.[M]"	"N-Term(TMT6plex); N5(Deamidated); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.4032"	"0.0000"	"1"	"1"	"1"	"790.46765"	"1579.92803"	"1579.92821"	"-0.11"	"-0.00009"	"9/84"	"9"	"84"	"2773764.63653564"	"HCD"	"MS2"	"15.73676"	"223.8"	"100.000"	"58.0325"	"18154"	"18154"	"18133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.6"	""	"368.0"	""	"334.4"	""	"228.9"	""	"412.6"	"429.3"	""	"705"	"62"	"35.000"	"28.000"	"2.04719457176262E-05"	"28"	"0"	"2.036E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLMAnGQLVk.[M]"	"N-Term(TMT6plex); N5(Deamidated); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.4857"	"0.0000"	"1"	"1"	"1"	"527.31421"	"1579.92807"	"1579.92821"	"-0.08"	"-0.00004"	"7/84"	"7"	"84"	"4591082.96051025"	"HCD"	"MS2"	"14.29245"	"134.1"	"100.000"	"57.9231"	"18056"	"18056"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.3"	""	"197.2"	""	"202.0"	""	"163.2"	""	"242.3"	"261.0"	""	"705"	"35"	"35.000"	"28.000"	"0.0124210732042477"	"19"	"0.0002277"	"0.00125"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLMAnGQLVk.[M]"	"N-Term(TMT6plex); N5(Deamidated); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.4237"	"0.0000"	"1"	"1"	"1"	"790.46826"	"1579.92925"	"1579.92821"	"0.66"	"0.00052"	"9/84"	"9"	"84"	"2714274.61181641"	"HCD"	"MS2"	"0"	"230.9"	"100.000"	"57.8656"	"18032"	"18032"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.7"	""	"367.3"	""	"362.9"	""	"235.4"	""	"414.5"	"455.4"	""	"703"	"59"	"35.000"	"28.000"	"4.62301528515571E-05"	"22"	"0"	"3.508E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTTGDWK"	"[R].kGTTGDWk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P07631; P17988"	"Probable alcohol sulfotransferase OS=Rattus norvegicus OX=10116 PE=2 SV=2; Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"1"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"527.31824"	"1579.94016"	"1579.94110"	"-0.60"	"-0.00031"	"5/76"	"5"	"76"	"13026884.2549438"	"HCD"	"MS2"	"14.64471"	"840.4"	"100.000"	"30.3418"	"6831"	"6831"	"6810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1337.5"	""	"1290.3"	""	"1068.0"	""	"1215.8"	""	"1595.1"	"1462.6"	""	"646"	"5"	"35.000"	"28.000"	"10.7449035713963"	"17"	"0.0001889"	"0.0005193"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTTGDWK"	"[R].kGTTGDWk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P07631; P17988"	"Probable alcohol sulfotransferase OS=Rattus norvegicus OX=10116 PE=2 SV=2; Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"1"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"527.31830"	"1579.94034"	"1579.94110"	"-0.48"	"-0.00025"	"7/76"	"7"	"76"	"13505246.7229004"	"HCD"	"MS2"	"16.33905"	"861.9"	"100.000"	"30.4337"	"6910"	"6910"	"6885"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1353.4"	""	"1343.5"	""	"1176.0"	""	"1190.0"	"3.4"	"1624.4"	"1470.3"	""	"646"	"6"	"35.000"	"28.000"	"8.63381069998249"	"16"	"0.0001889"	"0.001081"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKNDTSLK"	"[K].skNDTSLk.[Q]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"1"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"527.32520"	"1579.96103"	"1579.96223"	"-0.76"	"-0.00040"	"6/78"	"6"	"78"	"1210356.94781494"	"HCD"	"MS2"	"12.66681"	"101.9"	"100.000"	"26.9423"	"5488"	"5488"	"5461"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.3"	""	"118.6"	""	"138.5"	""	"140.6"	""	"169.2"	"198.8"	""	"489"	"5"	"33.000"	"26.000"	"7.52105671204102"	"17"	"0.004291"	"0.1123"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATLLGLQAPPTR"	"[R].lATLLGLQAPPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.32874"	"1579.97165"	"1579.97329"	"-1.04"	"-0.00055"	"9/124"	"9"	"124"	"2974848.6227417"	"HCD"	"MS2"	"34.18569"	"41.1"	"100.000"	"66.4384"	"21582"	"21582"	"21555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.7"	""	"52.0"	""	"57.6"	""	"73.6"	"0.9"	"71.3"	"81.1"	""	"437"	"55"	"33.000"	"26.000"	"6.33069573912739E-05"	"16"	"0"	"1.92E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATLLGLQAPPTR"	"[R].lATLLGLQAPPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.32910"	"1579.97275"	"1579.97329"	"-0.34"	"-0.00018"	"14/124"	"14"	"124"	"2623675.74169922"	"HCD"	"MS2"	"21.00353"	"36.9"	"100.000"	"66.5016"	"21555"	"21555"	"21529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.9"	""	"49.0"	""	"56.7"	""	"62.2"	""	"74.9"	"63.4"	""	"433"	"59"	"33.000"	"26.000"	"2.67582619340737E-05"	"16"	"0"	"1.485E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDASWYSPGTR"	"[R].vLDASWYSPGTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"790.91669"	"1580.82610"	"1580.82702"	"-0.59"	"-0.00046"	"8/104"	"8"	"104"	"3567052.07232666"	"HCD"	"MS2"	"7.459841"	"207.6"	"100.000"	"51.0279"	"15258"	"15258"	"15234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"318.6"	""	"304.4"	""	"332.2"	""	"300.4"	""	"347.0"	"361.5"	""	"1021"	"41"	"37.000"	"30.000"	"0.00423638816816113"	"24"	"7.476E-05"	"0.0002029"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDASWYSPGTR"	"[R].vLDASWYSPGTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"790.91699"	"1580.82671"	"1580.82702"	"-0.20"	"-0.00016"	"13/104"	"13"	"104"	"3802624.52722168"	"HCD"	"MS2"	"19.97782"	"218.5"	"100.000"	"51.2143"	"15384"	"15384"	"15366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"334.4"	""	"325.0"	""	"322.0"	""	"326.1"	"3.3"	"368.0"	"389.1"	""	"1026"	"43"	"37.000"	"30.000"	"0.00230206385035697"	"19"	"0"	"0.0001559"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"790.95398"	"1580.90068"	"1580.90382"	"-1.98"	"-0.00157"	"12/80"	"12"	"80"	"851905.8515625"	"HCD"	"MS2"	"57.97653"	"67.6"	"100.000"	"64.4002"	"20750"	"20750"	"20723"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.4"	""	"95.9"	""	"80.0"	""	"101.9"	""	"137.4"	"132.4"	""	"951"	"15"	"36.000"	"29.000"	"1.41954943529549"	"17"	"0.00103"	"0.01135"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"527.63885"	"1580.90201"	"1580.90382"	"-1.14"	"-0.00060"	"7/80"	"7"	"80"	"3110401.8505249"	"HCD"	"MS2"	"6.167673"	"42.4"	"100.000"	"65.4816"	"21191"	"21191"	"21171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.7"	""	"57.1"	""	"56.6"	""	"64.1"	"1.8"	"92.2"	"83.3"	""	"934"	"39"	"36.000"	"29.000"	"0.00525190522842555"	"22"	"0"	"0.0001054"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"3"	"3"	"0.8085"	"0.0000"	"1"	"1"	"1"	"527.63910"	"1580.90274"	"1580.90382"	"-0.68"	"-0.00036"	"7/80"	"7"	"80"	"5330495.78308105"	"HCD"	"MS2"	"6.485489"	"59.4"	"100.000"	"65.1238"	"21045"	"21045"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.6"	""	"83.8"	""	"85.2"	""	"91.4"	"1.0"	"118.5"	"115.8"	""	"919"	"47"	"36.000"	"29.000"	"0.000929577312602667"	"24"	"0"	"4.649E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.95502"	"1580.90276"	"1580.90382"	"-0.67"	"-0.00053"	"14/80"	"14"	"80"	"2346025.97796631"	"HCD"	"MS2"	"0"	"165.8"	"100.000"	"65.6429"	"21257"	"21257"	"21235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.1"	""	"244.1"	""	"234.1"	""	"216.0"	""	"337.0"	"337.3"	""	"919"	"23"	"36.000"	"29.000"	"0.25135383494978"	"14"	"0.0001889"	"0.0004216"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"790.95508"	"1580.90288"	"1580.90382"	"-0.59"	"-0.00047"	"8/80"	"8"	"80"	"9202671.64111328"	"HCD"	"MS2"	"1.484703"	"488.7"	"100.000"	"65.0062"	"20997"	"20997"	"20979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"567.0"	""	"719.0"	""	"713.9"	""	"598.7"	"6.9"	"1066.1"	"968.9"	""	"919"	"46"	"36.000"	"29.000"	"0.00107222397961812"	"19"	"0.0001308"	"0.0002264"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"527.63922"	"1580.90311"	"1580.90382"	"-0.45"	"-0.00024"	"7/80"	"7"	"80"	"4514215.90783691"	"HCD"	"MS2"	"6.114344"	"59.3"	"100.000"	"65.1184"	"20990"	"20990"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.7"	""	"78.8"	""	"84.0"	""	"94.2"	"0.6"	"135.0"	"106.4"	""	"922"	"45"	"36.000"	"29.000"	"0.00135425648955427"	"23"	"0"	"5.14E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.95526"	"1580.90325"	"1580.90382"	"-0.36"	"-0.00029"	"8/80"	"8"	"80"	"2444588.56640625"	"HCD"	"MS2"	"1.389166"	"171.5"	"100.000"	"65.6671"	"21214"	"21214"	"21193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"206.7"	""	"243.9"	""	"248.2"	""	"222.2"	""	"359.5"	"349.5"	""	"918"	"31"	"36.000"	"29.000"	"0.0353030872091554"	"14"	"0.0001889"	"0.001056"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"790.95526"	"1580.90325"	"1580.90382"	"-0.36"	"-0.00029"	"8/80"	"8"	"80"	"11546615.4552612"	"HCD"	"MS2"	"0.5180547"	"402.1"	"65.880"	"65.3419"	"21082"	"21082"	"21065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"437.6"	""	"566.9"	""	"570.9"	""	"547.9"	"2.6"	"866.9"	"826.7"	""	"918"	"51"	"36.000"	"29.000"	"0.000395196132252732"	"21"	"0"	"0.0001683"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"790.95532"	"1580.90337"	"1580.90382"	"-0.28"	"-0.00022"	"13/80"	"13"	"80"	"1182918.80670166"	"HCD"	"MS2"	"27.00863"	"82.9"	"100.000"	"64.4339"	"20711"	"20711"	"20681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.4"	""	"109.6"	""	"126.8"	""	"126.1"	""	"170.9"	"144.5"	""	"917"	"16"	"36.000"	"29.000"	"1.16503598549436"	"21"	"0.0002277"	"0.001267"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"790.95538"	"1580.90349"	"1580.90382"	"-0.21"	"-0.00016"	"13/80"	"13"	"80"	"9178843.03283691"	"HCD"	"MS2"	"1.587198"	"406.6"	"82.717"	"65.0330"	"20955"	"20955"	"20937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"470.4"	""	"559.4"	""	"598.1"	""	"516.2"	"2.6"	"870.1"	"844.7"	""	"880"	"42"	"36.000"	"29.000"	"0.00264516444492642"	"19"	"7.476E-05"	"0.0001912"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"790.95538"	"1580.90349"	"1580.90382"	"-0.21"	"-0.00016"	"8/80"	"8"	"80"	"10652595.6217651"	"HCD"	"MS2"	"1.075793"	"546.5"	"100.000"	"65.3155"	"21124"	"21124"	"21107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"635.6"	""	"766.7"	""	"783.4"	""	"707.0"	"9.6"	"1177.8"	"1110.2"	""	"880"	"51"	"36.000"	"29.000"	"0.000380585884261304"	"21"	"0.0001308"	"0.0002978"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"790.95557"	"1580.90386"	"1580.90382"	"0.03"	"0.00002"	"15/80"	"15"	"80"	"3270686.52923584"	"HCD"	"MS2"	"6.77118"	"190.4"	"100.000"	"64.6884"	"20868"	"20868"	"20851"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"238.6"	""	"257.0"	""	"276.4"	""	"260.1"	""	"391.5"	"386.2"	""	"880"	"27"	"36.000"	"29.000"	"0.0967058344025323"	"17"	"0.0001889"	"0.0005512"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"790.95581"	"1580.90434"	"1580.90382"	"0.33"	"0.00026"	"7/80"	"7"	"80"	"3544983.54602051"	"HCD"	"MS2"	"12.21548"	"214.3"	"100.000"	"64.7217"	"20828"	"20828"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.5"	""	"304.2"	""	"319.4"	""	"280.1"	"2.0"	"440.9"	"424.7"	""	"878"	"40"	"36.000"	"29.000"	"0.00447161619355757"	"17"	"0"	"0.0001257"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"3"	"3"	"0.8085"	"0.0000"	"1"	"1"	"1"	"527.63965"	"1580.90439"	"1580.90382"	"0.36"	"0.00019"	"7/80"	"7"	"80"	"4219801.07104492"	"HCD"	"MS2"	"9.845135"	"53.0"	"100.000"	"65.4247"	"21115"	"21115"	"21097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.4"	""	"70.4"	""	"75.0"	""	"81.1"	"0.6"	"108.9"	"102.9"	""	"878"	"47"	"36.000"	"29.000"	"0.000890152713869842"	"24"	"0"	"4.056E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"PPYTIVYFPVR"	"[M].pPYTIVYFPVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"3"	"3"	"0.0500"	"0.0000"	"1"	"1"	"1"	"527.63989"	"1580.90512"	"1580.90382"	"0.83"	"0.00044"	"6/80"	"6"	"80"	"4023122.30023193"	"HCD"	"MS2"	"20.00809"	"91.5"	"100.000"	"64.8243"	"20923"	"20923"	"20899"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.5"	""	"123.7"	""	"139.3"	""	"124.8"	""	"184.5"	"186.0"	""	"856"	"20"	"36.000"	"29.000"	"0.397597613541813"	""	"0"	"1.154E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IMFEVQDLK"	"[R].iMFEVQDLk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0500"	"2"	"2"	"2"	"527.63989"	"1580.90512"	"1580.91222"	"-4.49"	"-0.00237"	"7/76"	"7"	"76"	"4023122.30023193"	"HCD"	"MS2"	"20.00809"	"91.5"	"100.000"	"64.8243"	"20923"	"20923"	"20899"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.5"	""	"123.7"	""	"139.3"	""	"124.8"	""	"184.5"	"186.0"	""	"856"	"19"	"36.000"	"29.000"	"0.546315810171256"	""	"0.0001308"	"0.0002709"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEVLTWAK"	"[R].fEEVLTWAk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"790.95624"	"1580.90520"	"1580.90885"	"-2.31"	"-0.00183"	"7/72"	"7"	"72"	"912040.778747559"	"HCD"	"MS2"	"0"	"77.6"	"100.000"	"69.7064"	"22907"	"22907"	"22882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.8"	""	"103.0"	""	"96.5"	""	"132.5"	""	"154.2"	"158.3"	""	"856"	"32"	"36.000"	"29.000"	"0.0271921638832547"	"22"	"0.0002277"	"0.001163"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMFEVQDLK"	"[R].iMFEVQDLk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.2353"	"0.0000"	"1"	"1"	"1"	"527.64044"	"1580.90677"	"1580.91222"	"-3.45"	"-0.00182"	"9/76"	"9"	"76"	"2970173.73345947"	"HCD"	"MS2"	"27.36542"	"69.4"	"100.000"	"64.8256"	"20871"	"20871"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.5"	""	"90.0"	""	"108.4"	""	"101.5"	""	"136.7"	"144.1"	""	"850"	"17"	"36.000"	"29.000"	"0.867738626484551"	"26"	"0.0008453"	"0.008327"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.65906"	"1580.96262"	"1580.98883"	"-16.58"	"-0.00874"	"7/88"	"7"	"88"	"6220598.05761719"	"HCD"	"MS2"	"15.78596"	"254.1"	"100.000"	"59.2357"	"18587"	"18587"	"18569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"327.7"	""	"340.8"	""	"364.6"	""	"414.6"	""	"477.0"	"485.2"	""	"375"	"2"	"32.000"	"25.000"	"11.9674403660728"	"13"	"0.0002277"	"0.001116"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"527.66656"	"1580.98514"	"1580.98883"	"-2.33"	"-0.00123"	"8/88"	"8"	"88"	"189710.557922363"	"HCD"	"MS2"	"31.78995"	"4.6"	"100.000"	"99.6324"	"34077"	"34077"	"34073"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"5.6"	""	"8.3"	""	"5.5"	""	"10.4"	"9.3"	""	"289"	"56"	"31.000"	"24.000"	"3.3332496877005E-05"	""	"0"	"2.822E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6458"	"0.0000"	"1"	"1"	"1"	"527.66663"	"1580.98532"	"1580.98883"	"-2.22"	"-0.00117"	"7/88"	"7"	"88"	"243388.094726563"	"HCD"	"MS2"	"28.48435"	"9.2"	"100.000"	"83.4194"	"28440"	"28440"	"28414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"7.2"	""	"13.2"	""	"17.4"	""	"19.1"	"20.4"	""	"289"	"48"	"31.000"	"24.000"	"0.000219719118046346"	""	"0"	"3.25E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7174"	"0.0000"	"1"	"1"	"1"	"527.66669"	"1580.98551"	"1580.98883"	"-2.10"	"-0.00111"	"9/88"	"9"	"88"	"281590.218505859"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"79.7113"	"26928"	"26928"	"26897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.8"	""	"14.3"	""	"14.4"	""	"19.9"	""	"20.5"	"22.8"	""	"289"	"46"	"31.000"	"24.000"	"0.000380949885251768"	""	"0"	"8.516E-06"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"527.66675"	"1580.98569"	"1580.98883"	"-1.99"	"-0.00105"	"10/88"	"10"	"88"	"3692488.89776611"	"HCD"	"MS2"	"36.72987"	"106.2"	"100.000"	"48.5453"	"14300"	"14300"	"14271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.0"	""	"125.1"	""	"133.5"	""	"223.0"	""	"201.0"	"201.8"	""	"289"	"62"	"31.000"	"24.000"	"9.32970360955077E-06"	""	"0"	"2.631E-06"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.7027"	"0.0000"	"1"	"1"	"1"	"396.00189"	"1580.98574"	"1580.98883"	"-1.96"	"-0.00077"	"11/88"	"11"	"88"	"21680539.6081543"	"HCD"	"MS2"	"12.4742"	"431.3"	"79.235"	"43.0398"	"12061"	"12061"	"12035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"450.4"	""	"461.9"	""	"468.9"	""	"878.6"	""	"960.4"	"893.8"	""	"289"	"37"	"31.000"	"24.000"	"0.00287652297483649"	""	"0"	"4.37E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.7027"	"0.0000"	"1"	"1"	"1"	"396.00195"	"1580.98598"	"1580.98883"	"-1.80"	"-0.00071"	"11/88"	"11"	"88"	"16738090.9619141"	"HCD"	"MS2"	"0"	"233.7"	"55.920"	"43.3162"	"12120"	"12120"	"12101"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.9"	""	"245.7"	""	"257.8"	""	"469.3"	"6.6"	"522.7"	"492.3"	""	"289"	"37"	"31.000"	"24.000"	"0.00276609981165547"	""	"0"	"4.464E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"790.99670"	"1580.98613"	"1580.98883"	"-1.71"	"-0.00135"	"11/88"	"11"	"88"	"1661781.66674805"	"HCD"	"MS2"	"100"	"99.8"	"100.000"	"38.5380"	"10221"	"10221"	"10193"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.2"	""	"108.6"	""	"120.8"	""	"196.6"	""	"217.9"	"195.8"	""	"289"	"69"	"31.000"	"24.000"	"1.94476821161085E-06"	""	"0"	"3.399E-06"	"1.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.6905"	"0.0000"	"1"	"1"	"1"	"396.00201"	"1580.98623"	"1580.98883"	"-1.65"	"-0.00065"	"11/88"	"11"	"88"	"20250288.7015381"	"HCD"	"MS2"	"0"	"399.1"	"85.798"	"43.0034"	"11999"	"11999"	"11989"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"392.5"	""	"385.6"	""	"443.4"	""	"840.7"	"7.2"	"871.9"	"854.5"	""	"289"	"42"	"31.000"	"24.000"	"0.000814456412668504"	""	"0"	"3.839E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7634"	"0.0000"	"1"	"1"	"1"	"790.99677"	"1580.98625"	"1580.98883"	"-1.63"	"-0.00129"	"11/88"	"11"	"88"	"65154144.5332031"	"HCD"	"MS2"	"0"	"362.7"	"12.542"	"43.2553"	"12148"	"12148"	"12137"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"378.2"	""	"350.5"	""	"370.3"	""	"761.0"	"1.2"	"783.9"	"804.4"	""	"287"	"93"	"31.000"	"24.000"	"7.7598245342691E-09"	""	"0"	"2.334E-05"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.6667"	"0.0000"	"1"	"1"	"1"	"396.00204"	"1580.98635"	"1580.98883"	"-1.57"	"-0.00062"	"11/88"	"11"	"88"	"12561948.2049561"	"HCD"	"MS2"	"7.852714"	"245.1"	"75.766"	"43.6238"	"12294"	"12294"	"12273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"258.0"	""	"245.7"	""	"269.8"	""	"479.2"	"3.8"	"539.3"	"534.9"	""	"287"	"42"	"31.000"	"24.000"	"0.000829567828027205"	""	"0"	"0.000111"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"527.66699"	"1580.98642"	"1580.98883"	"-1.52"	"-0.00080"	"8/88"	"8"	"88"	"326159.798950195"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"78.2870"	"26398"	"26398"	"26367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.1"	""	"8.3"	""	"16.5"	""	"18.3"	""	"18.4"	"23.3"	""	"287"	"33"	"31.000"	"24.000"	"0.00668116044205446"	"23"	"0"	"7.754E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8082"	"0.0000"	"1"	"1"	"1"	"527.66699"	"1580.98642"	"1580.98883"	"-1.52"	"-0.00080"	"10/88"	"10"	"88"	"5888635.02093506"	"HCD"	"MS2"	"37.01475"	"157.3"	"100.000"	"45.7052"	"13142"	"13142"	"13134"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.0"	""	"168.2"	""	"188.4"	""	"315.6"	"8.7"	"344.6"	"310.0"	""	"287"	"73"	"31.000"	"24.000"	"7.74197743309207E-07"	""	"0"	"1.389E-07"	"1.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"527.66705"	"1580.98661"	"1580.98883"	"-1.41"	"-0.00074"	"7/88"	"7"	"88"	"206400.282714844"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"97.9230"	"33594"	"33594"	"33589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.2"	""	"5.3"	""	"7.5"	""	"5.8"	""	"7.0"	"14.5"	""	"287"	"38"	"31.000"	"24.000"	"0.00234883170824891"	"21"	"0"	"6.424E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8289"	"0.0000"	"1"	"1"	"1"	"527.66705"	"1580.98661"	"1580.98883"	"-1.41"	"-0.00074"	"10/88"	"10"	"88"	"7279955.82641602"	"HCD"	"MS2"	"27.05251"	"179.7"	"100.000"	"46.0054"	"13261"	"13261"	"13249"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.6"	""	"221.6"	""	"234.0"	""	"321.2"	"0.8"	"356.9"	"366.5"	""	"287"	"76"	"31.000"	"24.000"	"3.56329600609915E-07"	""	"0"	"4.913E-07"	"1.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.6667"	"0.0000"	"1"	"1"	"1"	"396.00211"	"1580.98659"	"1580.98883"	"-1.42"	"-0.00056"	"11/88"	"11"	"88"	"18471247.4688721"	"HCD"	"MS2"	"0"	"458.4"	"100.000"	"42.7332"	"11891"	"11891"	"11868"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"475.4"	""	"496.8"	""	"481.7"	""	"958.0"	"10.7"	"961.6"	"972.9"	""	"287"	"45"	"31.000"	"24.000"	"0.000501016352711771"	""	"0"	"3.626E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.5000"	"0.0000"	"1"	"1"	"1"	"396.00214"	"1580.98672"	"1580.98883"	"-1.34"	"-0.00053"	"10/88"	"10"	"88"	"6769875.86364746"	"HCD"	"MS2"	"11.38579"	"230.5"	"100.000"	"43.6326"	"12249"	"12249"	"12221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"282.3"	""	"287.6"	""	"312.8"	""	"383.6"	"1.4"	"446.6"	"473.2"	""	"287"	"28"	"31.000"	"24.000"	"0.0242020359143284"	""	"0"	"5.273E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7634"	"0.0000"	"1"	"1"	"1"	"790.99701"	"1580.98674"	"1580.98883"	"-1.32"	"-0.00105"	"11/88"	"11"	"88"	"55791994.8122559"	"HCD"	"MS2"	"0"	"507.7"	"19.882"	"42.9784"	"11990"	"11990"	"11975"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"532.2"	""	"499.8"	""	"539.4"	""	"1040.3"	"6.3"	"1071.8"	"1137.6"	""	"287"	"93"	"31.000"	"24.000"	"7.83162530665976E-09"	""	"0"	"2.068E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"527.66711"	"1580.98679"	"1580.98883"	"-1.29"	"-0.00068"	"9/88"	"9"	"88"	"129263.776672363"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"98.9436"	"33871"	"33871"	"33866"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"3.6"	""	"5.3"	""	"8.0"	""	"8.4"	"10.5"	""	"287"	"22"	"31.000"	"24.000"	"0.0915908102683438"	"23"	"0.0001308"	"0.0002959"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"527.66711"	"1580.98679"	"1580.98883"	"-1.29"	"-0.00068"	"6/88"	"6"	"88"	"196817.835876465"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"83.7971"	"28594"	"28594"	"28565"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.8"	""	"10.5"	""	"16.4"	""	"13.5"	""	"18.1"	"17.8"	""	"287"	"26"	"31.000"	"24.000"	"0.0331781297390198"	""	"0.0001889"	"0.0006149"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"527.66711"	"1580.98679"	"1580.98883"	"-1.29"	"-0.00068"	"8/88"	"8"	"88"	"182683.163513184"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"98.5627"	"33768"	"33768"	"33765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.1"	""	"7.7"	""	"1.4"	""	"7.3"	""	"9.4"	"10.4"	""	"287"	"46"	"31.000"	"24.000"	"0.000334851231937324"	"21"	"0"	"1.069E-05"	"1.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7875"	"0.0000"	"1"	"1"	"1"	"527.66711"	"1580.98679"	"1580.98883"	"-1.29"	"-0.00068"	"10/88"	"10"	"88"	"4610006.50836182"	"HCD"	"MS2"	"44.74171"	"126.4"	"100.000"	"46.3032"	"13383"	"13383"	"13360"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.4"	""	"156.7"	""	"172.5"	""	"226.7"	"2.4"	"244.9"	"247.9"	""	"287"	"80"	"31.000"	"24.000"	"1.4416236590495E-07"	""	"0"	"9.384E-07"	"1.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"790.99707"	"1580.98686"	"1580.98883"	"-1.25"	"-0.00098"	"11/88"	"11"	"88"	"12536204.7848511"	"HCD"	"MS2"	"0"	"480.2"	"81.576"	"43.8276"	"12377"	"12377"	"12359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"478.7"	""	"465.3"	""	"526.6"	""	"966.8"	"2.4"	"1048.2"	"1079.9"	""	"287"	"93"	"31.000"	"24.000"	"7.79564225691641E-09"	""	"0"	"3.605E-06"	"1.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7634"	"0.0000"	"1"	"1"	"1"	"790.99713"	"1580.98699"	"1580.98883"	"-1.17"	"-0.00092"	"11/88"	"11"	"88"	"25825162.6494141"	"HCD"	"MS2"	"0"	"620.2"	"56.523"	"43.5369"	"12259"	"12259"	"12244"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"601.7"	""	"615.4"	""	"651.7"	""	"1267.6"	"10.4"	"1364.9"	"1389.3"	""	"287"	"93"	"31.000"	"24.000"	"7.65335575024737E-09"	""	"0"	"1.24E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"527.66718"	"1580.98697"	"1580.98883"	"-1.18"	"-0.00062"	"7/88"	"7"	"88"	"145302.844360352"	"HCD"	"MS2"	"5.98285"	"4.4"	"100.000"	"94.7686"	"32661"	"32661"	"32651"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"6.6"	""	"2.5"	""	"10.7"	""	"10.2"	"7.0"	""	"287"	"40"	"31.000"	"24.000"	"0.00132388999796708"	""	"0"	"4.966E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.66718"	"1580.98697"	"1580.98883"	"-1.18"	"-0.00062"	"7/88"	"7"	"88"	"170329.126525879"	"HCD"	"MS2"	"9.848633"	"4.5"	"100.000"	"99.2212"	"33947"	"33947"	"33941"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.6"	""	"5.0"	""	"6.9"	""	"6.2"	""	"10.1"	"7.6"	""	"287"	"38"	"31.000"	"24.000"	"0.00219205729357164"	"15"	"0"	"0.0001659"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"8/88"	"8"	"88"	"135499.894104004"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"96.4961"	"33170"	"33170"	"33163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	"2.5"	""	"3.5"	""	"7.7"	""	"8.5"	"11.0"	""	"287"	"50"	"31.000"	"24.000"	"0.000150609338511608"	""	"0"	"7.247E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5161"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"10/88"	"10"	"88"	"169875.91619873"	"HCD"	"MS2"	"5.427838"	"4.0"	"100.000"	"92.6647"	"31986"	"31986"	"31983"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.8"	""	"3.3"	""	"2.4"	""	"7.5"	""	"9.6"	"11.4"	""	"287"	"31"	"31.000"	"24.000"	"0.0111391461236217"	""	"0.0001859"	"0.0003361"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"7/88"	"7"	"88"	"151786.055603027"	"HCD"	"MS2"	"6.693742"	"4.4"	"100.000"	"89.4627"	"30829"	"30829"	"30808"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	"5.7"	""	"4.6"	""	"7.5"	""	"9.6"	"9.9"	""	"287"	"44"	"31.000"	"24.000"	"0.000541816093977973"	"22"	"0"	"5.015E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7925"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"8/88"	"8"	"88"	"219963.13861084"	"HCD"	"MS2"	"8.68381"	"8.5"	"100.000"	"83.7137"	"28611"	"28611"	"28587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"10.4"	""	"10.5"	""	"16.1"	""	"21.1"	"17.6"	""	"287"	"53"	"31.000"	"24.000"	"7.0283260579372E-05"	""	"0"	"9.193E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"6/88"	"6"	"88"	"191818.780212402"	"HCD"	"MS2"	"26.47816"	"4.9"	"100.000"	"100.0825"	"34177"	"34177"	"34173"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.5"	""	"3.1"	""	"7.6"	""	"10.3"	""	"11.5"	"9.6"	""	"287"	"34"	"31.000"	"24.000"	"0.00515052976215582"	""	"0"	"9.495E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"6/88"	"6"	"88"	"202021.656738281"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"99.0675"	"33910"	"33910"	"33906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.8"	""	"4.3"	""	"7.3"	""	"6.0"	""	"8.7"	"6.5"	""	"287"	"39"	"31.000"	"24.000"	"0.00182747692125891"	"16"	"0"	"7.899E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"6/88"	"6"	"88"	"179531.416992188"	"HCD"	"MS2"	"11.37277"	"4.6"	"100.000"	"100.1091"	"34201"	"34201"	"34198"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"4.3"	""	"7.2"	""	"9.5"	""	"9.3"	"9.5"	""	"287"	"32"	"31.000"	"24.000"	"0.00930790412141722"	"21"	"0"	"0.0001181"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"10/88"	"10"	"88"	"341762.042602539"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"119.8344"	"37736"	"37736"	"37732"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"6.6"	""	"6.0"	""	"6.3"	"9.1"	""	"287"	"21"	"31.000"	"24.000"	"0.124122896344312"	"19"	"7.476E-05"	"0.0001873"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"7/88"	"7"	"88"	"203856.288513184"	"HCD"	"MS2"	"5.462779"	"3.9"	"100.000"	"91.7646"	"31684"	"31684"	"31679"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"5.1"	""	"3.2"	""	"5.5"	""	"9.8"	"8.5"	""	"287"	"35"	"31.000"	"24.000"	"0.00467575665937883"	"21"	"0.0001308"	"0.0002309"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"10/88"	"10"	"88"	"6384176.29937744"	"HCD"	"MS2"	"10.27731"	"169.9"	"100.000"	"45.3242"	"12939"	"12939"	"12912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.7"	""	"165.1"	""	"187.3"	""	"281.6"	"11.6"	"447.6"	"361.2"	""	"287"	"74"	"31.000"	"24.000"	"5.29482853948166E-07"	""	"0"	"3.029E-07"	"1.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8429"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"10/88"	"10"	"88"	"6917928.42242432"	"HCD"	"MS2"	"42.54592"	"185.6"	"100.000"	"45.7593"	"13112"	"13112"	"13091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.0"	""	"214.5"	""	"234.1"	""	"341.7"	"0.4"	"384.5"	"369.1"	""	"287"	"70"	"31.000"	"24.000"	"1.46504815912052E-06"	""	"0"	"6.375E-07"	"1.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7792"	"0.0000"	"1"	"1"	"1"	"527.66724"	"1580.98716"	"1580.98883"	"-1.06"	"-0.00056"	"10/88"	"10"	"88"	"433875442.850098"	"HCD"	"MS2"	"6.873603"	"1176.0"	"11.667"	"42.6439"	"11854"	"11854"	"11836"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1166.8"	""	"1176.5"	""	"1256.4"	""	"2522.9"	"13.9"	"2491.5"	"2553.6"	""	"287"	"77"	"31.000"	"24.000"	"3.19044969308477E-07"	""	"0"	"6.543E-07"	"1.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"790.99725"	"1580.98723"	"1580.98883"	"-1.01"	"-0.00080"	"11/88"	"11"	"88"	"11368552.3739014"	"HCD"	"MS2"	"0"	"465.6"	"87.744"	"43.5662"	"12222"	"12222"	"12212"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"429.5"	""	"462.6"	""	"515.9"	""	"928.0"	"3.5"	"1018.1"	"1072.7"	""	"286"	"93"	"31.000"	"24.000"	"7.66189220244081E-09"	""	"0"	"8.01E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"790.99731"	"1580.98735"	"1580.98883"	"-0.94"	"-0.00074"	"11/88"	"11"	"88"	"1249581.09820557"	"HCD"	"MS2"	"0"	"83.3"	"100.000"	"38.4702"	"10150"	"10150"	"10119"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.0"	""	"101.3"	""	"93.5"	""	"160.7"	""	"166.4"	"177.6"	""	"286"	"72"	"31.000"	"24.000"	"9.73500182932052E-07"	""	"0"	"1.015E-06"	"1.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"790.99731"	"1580.98735"	"1580.98883"	"-0.94"	"-0.00074"	"11/88"	"11"	"88"	"38202850.7203369"	"HCD"	"MS2"	"0"	"724.6"	"41.238"	"42.9848"	"12038"	"12038"	"12019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"740.4"	""	"716.8"	""	"804.4"	""	"1530.7"	"9.9"	"1518.3"	"1567.3"	""	"286"	"93"	"31.000"	"24.000"	"7.80433741360519E-09"	""	"0"	"1.513E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"527.66730"	"1580.98734"	"1580.98883"	"-0.94"	"-0.00050"	"10/88"	"10"	"88"	"119839.772277832"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"89.8774"	"31024"	"31024"	"31015"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"5.3"	""	"6.0"	""	"10.7"	""	"12.0"	"8.4"	""	"286"	"32"	"31.000"	"24.000"	"0.00944791630650862"	"22"	"0.0001859"	"0.0003629"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.66730"	"1580.98734"	"1580.98883"	"-0.94"	"-0.00050"	"6/88"	"6"	"88"	"134076.863708496"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"88.3635"	"30423"	"30423"	"30409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"5.3"	""	"9.1"	""	"8.0"	""	"11.7"	"10.5"	""	"286"	"26"	"31.000"	"24.000"	"0.035919975970587"	"14"	"7.476E-05"	"0.0001858"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"527.66730"	"1580.98734"	"1580.98883"	"-0.94"	"-0.00050"	"5/88"	"5"	"88"	"113436.322937012"	"HCD"	"MS2"	"7.193733"	"4.0"	"100.000"	"88.8003"	"30590"	"30590"	"30582"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.2"	""	"4.3"	""	"6.8"	""	"4.6"	""	"10.1"	"6.4"	""	"286"	"29"	"31.000"	"24.000"	"0.0192901692210607"	"16"	"0.0001889"	"0.000386"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"527.66730"	"1580.98734"	"1580.98883"	"-0.94"	"-0.00050"	"7/88"	"7"	"88"	"126070.430053711"	"HCD"	"MS2"	"7.969863"	"3.2"	"100.000"	"104.5838"	"35163"	"35163"	"35160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	"4.6"	""	"4.7"	""	"6.5"	""	"5.7"	"5.7"	""	"286"	"44"	"31.000"	"24.000"	"0.000558902480983135"	""	"0.0001308"	"0.0002415"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7451"	"0.0000"	"1"	"1"	"1"	"527.66730"	"1580.98734"	"1580.98883"	"-0.94"	"-0.00050"	"9/88"	"9"	"88"	"248072.077392578"	"HCD"	"MS2"	"33.25275"	"8.4"	"100.000"	"85.6600"	"29400"	"29400"	"29374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.8"	""	"6.5"	""	"13.8"	""	"17.5"	""	"17.5"	"18.7"	""	"286"	"51"	"31.000"	"24.000"	"0.000104552888938129"	""	"0"	"8.877E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"527.66730"	"1580.98734"	"1580.98883"	"-0.94"	"-0.00050"	"19/88"	"19"	"88"	"4161455387.76563"	"HCD"	"MS2"	"4.020054"	"206.0"	"0.266"	"43.2049"	"12128"	"12128"	"12116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.1"	""	"198.4"	""	"210.8"	""	"429.8"	""	"453.3"	"456.2"	""	"286"	"76"	"31.000"	"24.000"	"3.39888160987358E-07"	""	"0"	"1.153E-06"	"1.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7538"	"0.0000"	"1"	"1"	"1"	"527.66730"	"1580.98734"	"1580.98883"	"-0.94"	"-0.00050"	"10/88"	"10"	"88"	"17110879.8675537"	"HCD"	"MS2"	"16.043"	"197.0"	"52.687"	"44.3555"	"12543"	"12543"	"12533"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.7"	""	"217.2"	""	"215.7"	""	"380.6"	"3.8"	"422.2"	"427.5"	""	"286"	"65"	"31.000"	"24.000"	"4.60612837153532E-06"	""	"0"	"4.35E-07"	"1.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"790.99738"	"1580.98747"	"1580.98883"	"-0.86"	"-0.00068"	"11/88"	"11"	"88"	"29631170.9641113"	"HCD"	"MS2"	"0"	"422.1"	"33.644"	"43.2706"	"12102"	"12102"	"12085"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"413.4"	""	"421.0"	""	"455.3"	""	"853.9"	""	"934.0"	"939.8"	""	"286"	"93"	"31.000"	"24.000"	"7.60914810751518E-09"	""	"0"	"1.434E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"8/88"	"8"	"88"	"130163.29888916"	"HCD"	"MS2"	"3.478793"	"4.6"	"100.000"	"95.9465"	"33002"	"33002"	"32998"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"6.0"	""	"4.4"	""	"9.2"	""	"9.0"	"10.3"	""	"286"	"57"	"31.000"	"24.000"	"2.63230396210061E-05"	""	"0"	"4.991E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"7/88"	"7"	"88"	"123184.823852539"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"101.4995"	"34518"	"34518"	"34515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"4.0"	""	"5.0"	""	"10.2"	""	"7.4"	"7.1"	""	"286"	"40"	"31.000"	"24.000"	"0.00127742684173861"	""	"0"	"6.273E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.4524"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"10/88"	"10"	"88"	"153704.790527344"	"HCD"	"MS2"	"48.44768"	"4.2"	"100.000"	"99.3735"	"33997"	"33997"	"33990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.9"	""	"3.8"	""	"4.2"	""	"12.1"	""	"8.1"	"7.1"	""	"286"	"42"	"31.000"	"24.000"	"0.00100771108862302"	""	"0.0001859"	"0.000321"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"11/88"	"11"	"88"	"146719.004821777"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"92.3506"	"31886"	"31886"	"31877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.1"	""	"6.0"	""	"4.3"	""	"9.4"	""	"8.2"	"7.8"	""	"286"	"30"	"31.000"	"24.000"	"0.0132842193309531"	"22"	"7.476E-05"	"0.0002044"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6061"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"7/88"	"7"	"88"	"127247.924499512"	"HCD"	"MS2"	"16.19379"	"3.5"	"100.000"	"89.6062"	"30923"	"30923"	"30908"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	"3.7"	""	"2.6"	""	"8.2"	""	"7.7"	"8.1"	""	"286"	"33"	"31.000"	"24.000"	"0.00724996712832827"	""	"0"	"0.0001401"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"6/88"	"6"	"88"	"136662.968994141"	"HCD"	"MS2"	"4.991555"	"3.9"	"100.000"	"92.9500"	"32079"	"32079"	"32075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.7"	""	"4.1"	""	"5.5"	""	"8.2"	""	"9.2"	"7.6"	""	"286"	"38"	"31.000"	"24.000"	"0.00207651961315047"	""	"0"	"4.612E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"6/88"	"6"	"88"	"161958.965820313"	"HCD"	"MS2"	"10.33778"	"4.3"	"100.000"	"92.0354"	"31777"	"31777"	"31770"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.5"	""	"3.4"	""	"5.0"	""	"8.5"	""	"10.7"	"9.6"	""	"286"	"36"	"31.000"	"24.000"	"0.00326840628882687"	"23"	"0"	"8.359E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"11/88"	"11"	"88"	"177717.863647461"	"HCD"	"MS2"	"9.29064"	"3.2"	"100.000"	"118.8638"	"37561"	"37561"	"37559"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	"2.2"	""	"3.2"	""	"6.7"	""	"7.7"	"6.8"	""	"286"	"20"	"31.000"	"24.000"	"0.128924672677652"	"19"	"0"	"8.428E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5862"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"10/88"	"10"	"88"	"149960.44744873"	"HCD"	"MS2"	"6.061446"	"4.8"	"100.000"	"91.7621"	"31656"	"31656"	"31647"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.7"	""	"6.6"	""	"5.4"	""	"9.5"	""	"10.2"	"7.2"	""	"286"	"29"	"31.000"	"24.000"	"0.0173115533097719"	""	"0"	"0.0001796"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"8/88"	"8"	"88"	"238152.011108398"	"HCD"	"MS2"	"18.24607"	"5.5"	"100.000"	"103.5563"	"34961"	"34961"	"34957"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.4"	""	"11.1"	""	"5.2"	""	"8.0"	""	"7.9"	"11.5"	""	"286"	"27"	"31.000"	"24.000"	"0.0277546680495767"	"19"	"0.0001308"	"0.0002853"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"527.66736"	"1580.98752"	"1580.98883"	"-0.83"	"-0.00044"	"5/88"	"5"	"88"	"208746.175720215"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"117.8558"	"37392"	"37392"	"37389"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.0"	""	"7.2"	""	"2.4"	""	"8.2"	""	"6.9"	"8.9"	""	"286"	"21"	"31.000"	"24.000"	"0.118395729410864"	"21"	"0.0001889"	"0.000429"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7125"	"0.0000"	"1"	"1"	"1"	"790.99744"	"1580.98760"	"1580.98883"	"-0.78"	"-0.00062"	"10/88"	"10"	"88"	"4026059.20117188"	"HCD"	"MS2"	"0"	"198.7"	"100.000"	"43.8687"	"12344"	"12344"	"12327"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"202.9"	""	"202.7"	""	"215.7"	""	"391.6"	"2.6"	"425.8"	"448.9"	""	"286"	"80"	"31.000"	"24.000"	"1.41688968119666E-07"	""	"0"	"2.27E-06"	"1.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6333"	"0.0000"	"1"	"1"	"1"	"527.66742"	"1580.98771"	"1580.98883"	"-0.71"	"-0.00038"	"6/88"	"6"	"88"	"153124.7734375"	"HCD"	"MS2"	"5.831008"	"4.9"	"100.000"	"98.3404"	"33705"	"33705"	"33703"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.3"	""	"6.0"	""	"4.9"	""	"10.8"	""	"9.5"	"11.1"	""	"286"	"30"	"31.000"	"24.000"	"0.0142342974681268"	""	"0"	"6.908E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"527.66742"	"1580.98771"	"1580.98883"	"-0.71"	"-0.00038"	"8/88"	"8"	"88"	"129737.891540527"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"99.5273"	"34037"	"34037"	"34034"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"2.9"	""	"5.2"	""	"6.1"	""	"8.4"	"7.5"	""	"286"	"21"	"31.000"	"24.000"	"0.123405932330677"	"19"	"0.0001889"	"0.0004427"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"527.66742"	"1580.98771"	"1580.98883"	"-0.71"	"-0.00038"	"8/88"	"8"	"88"	"159676.554016113"	"HCD"	"MS2"	"4.715591"	"4.0"	"100.000"	"114.7524"	"36861"	"36861"	"36859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"5.2"	""	"2.9"	""	"8.6"	""	"7.1"	"8.8"	""	"286"	"30"	"31.000"	"24.000"	"0.0128332317613607"	"22"	"0"	"6.149E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"527.66742"	"1580.98771"	"1580.98883"	"-0.71"	"-0.00038"	"7/88"	"7"	"88"	"133224.281921387"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"103.3092"	"34902"	"34902"	"34900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.4"	""	"4.2"	""	"5.4"	""	"5.2"	""	"9.4"	"7.7"	""	"286"	"30"	"31.000"	"24.000"	"0.0143"	"20"	"0.0001859"	"0.000369"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"527.66742"	"1580.98771"	"1580.98883"	"-0.71"	"-0.00038"	"7/88"	"7"	"88"	"135981.249694824"	"HCD"	"MS2"	"4.625547"	"3.1"	"100.000"	"103.1745"	"34870"	"34870"	"34866"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"4.0"	""	"5.7"	""	"4.4"	""	"4.0"	"7.4"	""	"286"	"34"	"31.000"	"24.000"	"0.0051800748773588"	"16"	"0"	"5.142E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7581"	"0.0000"	"1"	"1"	"1"	"527.66742"	"1580.98771"	"1580.98883"	"-0.71"	"-0.00038"	"9/88"	"9"	"88"	"148652.525878906"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"88.6007"	"30557"	"30557"	"30538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.3"	""	"5.0"	""	"6.5"	""	"6.9"	""	"8.8"	"10.5"	""	"286"	"62"	"31.000"	"24.000"	"8.38177575255062E-06"	""	"0"	"1.643E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"527.66742"	"1580.98771"	"1580.98883"	"-0.71"	"-0.00038"	"7/88"	"7"	"88"	"278772.323242188"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"80.6898"	"27327"	"27327"	"27296"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.6"	""	"10.0"	""	"13.6"	""	"18.0"	""	"19.7"	"23.8"	""	"286"	"38"	"31.000"	"24.000"	"0.00235687221988148"	""	"0"	"1.431E-05"	"1.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7867"	"0.0000"	"1"	"1"	"1"	"527.66742"	"1580.98771"	"1580.98883"	"-0.71"	"-0.00038"	"10/88"	"10"	"88"	"4416232.61987305"	"HCD"	"MS2"	"0"	"124.4"	"100.000"	"46.0988"	"13251"	"13251"	"13229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.9"	""	"144.3"	""	"148.0"	""	"216.0"	"8.8"	"245.7"	"273.2"	""	"286"	"75"	"31.000"	"24.000"	"4.35848983516802E-07"	""	"0"	"7.118E-07"	"1.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"527.66742"	"1580.98771"	"1580.98883"	"-0.71"	"-0.00038"	"11/88"	"11"	"88"	"14556581.684021"	"HCD"	"MS2"	"4.955379"	"214.3"	"72.192"	"44.7107"	"12737"	"12737"	"12721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.6"	""	"219.9"	""	"228.6"	""	"434.3"	"3.1"	"472.2"	"470.4"	""	"286"	"70"	"31.000"	"24.000"	"1.54645055035605E-06"	""	"0"	"1.437E-07"	"1.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7683"	"0.0000"	"1"	"1"	"1"	"527.66742"	"1580.98771"	"1580.98883"	"-0.71"	"-0.00038"	"10/88"	"10"	"88"	"67790592.5935059"	"HCD"	"MS2"	"12.08195"	"551.1"	"30.659"	"38.4038"	"10122"	"10122"	"10103"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"707.4"	""	"694.9"	""	"642.1"	""	"992.8"	""	"1103.4"	"1091.0"	""	"286"	"82"	"31.000"	"24.000"	"8.73647095614968E-08"	""	"0"	"1.928E-07"	"1.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"790.99750"	"1580.98772"	"1580.98883"	"-0.70"	"-0.00056"	"11/88"	"11"	"88"	"28129147.1118774"	"HCD"	"MS2"	"3.692238"	"1277.7"	"100.000"	"42.6943"	"11875"	"11875"	"11852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1288.6"	""	"1279.7"	""	"1366.0"	""	"2695.4"	"14.1"	"2708.3"	"2797.0"	""	"286"	"93"	"31.000"	"24.000"	"7.87655005859727E-09"	""	"0"	"6.273E-06"	"1.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"527.66748"	"1580.98789"	"1580.98883"	"-0.60"	"-0.00031"	"9/88"	"9"	"88"	"175930.89050293"	"HCD"	"MS2"	"9.493514"	"4.4"	"100.000"	"98.6825"	"33800"	"33800"	"33791"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"2.4"	""	"4.7"	""	"8.8"	""	"10.8"	"10.8"	""	"286"	"63"	"31.000"	"24.000"	"7.6442703393767E-06"	""	"0"	"8.575E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"527.66748"	"1580.98789"	"1580.98883"	"-0.60"	"-0.00031"	"8/88"	"8"	"88"	"228444.969787598"	"HCD"	"MS2"	"27.10555"	"7.7"	"100.000"	"86.6773"	"29759"	"29759"	"29732"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"7.7"	""	"11.2"	""	"17.2"	""	"12.1"	"18.3"	""	"286"	"43"	"31.000"	"24.000"	"0.000736776961751911"	"24"	"0"	"1.972E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7805"	"0.0000"	"1"	"1"	"1"	"527.66748"	"1580.98789"	"1580.98883"	"-0.60"	"-0.00031"	"7/88"	"7"	"88"	"220346.668395996"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"117.0260"	"37247"	"37247"	"37243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.7"	""	"4.1"	""	"4.1"	""	"7.4"	""	"6.8"	"7.2"	""	"286"	"41"	"31.000"	"24.000"	"0.00115169117091467"	""	"0"	"0.0001673"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7945"	"0.0000"	"1"	"1"	"1"	"527.66748"	"1580.98789"	"1580.98883"	"-0.60"	"-0.00031"	"10/88"	"10"	"88"	"27971219.8111572"	"HCD"	"MS2"	"4.667391"	"198.7"	"32.141"	"45.3288"	"12989"	"12989"	"12971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.9"	""	"106.4"	""	"157.1"	""	"232.9"	"7.8"	"897.7"	"391.4"	""	"286"	"73"	"31.000"	"24.000"	"6.95562304138791E-07"	""	"0"	"2.825E-07"	"1.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"527.66754"	"1580.98807"	"1580.98883"	"-0.48"	"-0.00025"	"4/88"	"4"	"88"	"152129.200134277"	"HCD"	"MS2"	"9.379272"	"5.4"	"100.000"	"93.2278"	"32143"	"32143"	"32136"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"4.0"	""	"6.7"	""	"12.5"	""	"13.8"	"10.7"	""	"284"	"27"	"31.000"	"24.000"	"0.0268712793847586"	""	"0.0001889"	"0.0009939"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.66754"	"1580.98807"	"1580.98883"	"-0.48"	"-0.00025"	"7/88"	"7"	"88"	"182221.055053711"	"HCD"	"MS2"	"12.67097"	"4.3"	"100.000"	"94.4101"	"32540"	"32540"	"32534"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.3"	""	"5.1"	""	"4.9"	""	"7.3"	""	"11.0"	"8.7"	""	"284"	"32"	"31.000"	"24.000"	"0.00898024828954231"	"14"	"0.0001308"	"0.0003032"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"527.66754"	"1580.98807"	"1580.98883"	"-0.48"	"-0.00025"	"8/88"	"8"	"88"	"193239.591369629"	"HCD"	"MS2"	"16.26261"	"4.1"	"100.000"	"105.6131"	"35340"	"35340"	"35336"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"3.8"	""	"5.1"	""	"7.9"	""	"9.0"	"9.7"	""	"284"	"39"	"31.000"	"24.000"	"0.00190672624481577"	""	"0"	"5.403E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.66754"	"1580.98807"	"1580.98883"	"-0.48"	"-0.00025"	"8/88"	"8"	"88"	"256993.857727051"	"HCD"	"MS2"	"13.30082"	"2.8"	"100.000"	"119.3159"	"37643"	"37643"	"37640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.4"	""	""	""	"3.8"	""	"5.3"	""	"9.3"	"6.4"	""	"284"	"43"	"31.000"	"24.000"	"0.000692290455946809"	"15"	"0"	"2.911E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.6809"	"0.0000"	"1"	"1"	"1"	"396.00250"	"1580.98818"	"1580.98883"	"-0.41"	"-0.00016"	"11/88"	"11"	"88"	"24746688.3387451"	"HCD"	"MS2"	"0"	"272.1"	"47.578"	"43.3148"	"12170"	"12170"	"12161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"272.1"	"3.3"	"276.8"	""	"292.9"	""	"571.0"	"6.5"	"589.8"	"575.2"	""	"277"	"47"	"31.000"	"24.000"	"0.000279543741369896"	""	"0"	"6.942E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"527.66760"	"1580.98825"	"1580.98883"	"-0.37"	"-0.00019"	"9/88"	"9"	"88"	"192498.191345215"	"HCD"	"MS2"	"46.16972"	"6.7"	"100.000"	"87.0467"	"29909"	"29909"	"29884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	"8.2"	""	"7.3"	""	"14.8"	""	"14.8"	"13.3"	""	"277"	"74"	"31.000"	"24.000"	"5.09858628494905E-07"	""	"0"	"2.463E-06"	"1.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.66760"	"1580.98825"	"1580.98883"	"-0.37"	"-0.00019"	"7/88"	"7"	"88"	"140204.024902344"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"90.8791"	"31355"	"31355"	"31344"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.3"	""	"3.3"	""	"6.9"	""	"7.8"	""	"8.9"	"10.9"	""	"277"	"17"	"31.000"	"24.000"	"0.296790348255128"	"14"	"0.0006037"	"0.003709"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"527.66760"	"1580.98825"	"1580.98883"	"-0.37"	"-0.00019"	"10/88"	"10"	"88"	"148809.942138672"	"HCD"	"MS2"	"23.8413"	"3.8"	"100.000"	"87.4857"	"30138"	"30138"	"30116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.0"	""	"5.3"	""	"5.3"	""	"8.7"	""	"7.1"	"8.5"	""	"277"	"32"	"31.000"	"24.000"	"0.0078243771011504"	""	"0"	"0.0001716"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"527.66760"	"1580.98825"	"1580.98883"	"-0.37"	"-0.00019"	"7/88"	"7"	"88"	"158799.005554199"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"92.4786"	"31902"	"31902"	"31896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"4.9"	""	"5.3"	""	"9.4"	""	"12.4"	"13.0"	""	"277"	"39"	"31.000"	"24.000"	"0.00192952217207924"	""	"0"	"5.007E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"527.66760"	"1580.98825"	"1580.98883"	"-0.37"	"-0.00019"	"8/88"	"8"	"88"	"177304.307739258"	"HCD"	"MS2"	"7.901199"	"3.7"	"100.000"	"117.5423"	"37333"	"37333"	"37331"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.4"	""	"4.3"	""	"7.6"	""	"8.5"	""	"5.9"	"6.0"	""	"277"	"35"	"31.000"	"24.000"	"0.00412524525475943"	"20"	"0"	"4.843E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"527.66760"	"1580.98825"	"1580.98883"	"-0.37"	"-0.00019"	"7/88"	"7"	"88"	"210309.200683594"	"HCD"	"MS2"	"59.20552"	"6.7"	"100.000"	"86.4426"	"29716"	"29716"	"29695"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.6"	""	"8.2"	""	"9.4"	""	"12.1"	""	"13.3"	"15.5"	""	"277"	"26"	"31.000"	"24.000"	"0.0350307772507791"	"20"	"0.0001889"	"0.0009803"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"527.66760"	"1580.98825"	"1580.98883"	"-0.37"	"-0.00019"	"8/88"	"8"	"88"	"193461.337097168"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"102.5612"	"34744"	"34744"	"34740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.6"	""	"4.7"	""	"3.6"	""	"8.5"	""	"6.1"	"10.6"	""	"277"	"50"	"31.000"	"24.000"	"0.000146032585150189"	"24"	"0"	"2.051E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"527.66760"	"1580.98825"	"1580.98883"	"-0.37"	"-0.00019"	"8/88"	"8"	"88"	"247834.624816895"	"HCD"	"MS2"	"11.80713"	"7.4"	"100.000"	"85.6077"	"29331"	"29331"	"29305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"8.0"	""	"9.2"	""	"12.6"	""	"16.6"	"19.2"	""	"277"	"43"	"31.000"	"24.000"	"0.000689365862695826"	"24"	"0"	"1.515E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8305"	"0.0000"	"1"	"1"	"1"	"527.66760"	"1580.98825"	"1580.98883"	"-0.37"	"-0.00019"	"9/88"	"9"	"88"	"137133695.117432"	"HCD"	"MS2"	"10.64306"	"1516.1"	"65.975"	"42.9230"	"12013"	"12013"	"11987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1358.6"	""	"1459.2"	""	"1596.9"	""	"3195.5"	""	"3508.9"	"3437.0"	""	"277"	"59"	"31.000"	"24.000"	"1.57924595577222E-05"	""	"0"	"5.279E-06"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6977"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"7/88"	"7"	"88"	"117559.48638916"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"96.6976"	"33224"	"33224"	"33218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.1"	""	"6.6"	""	"2.7"	""	"11.7"	""	"7.5"	"6.9"	""	"279"	"43"	"31.000"	"24.000"	"0.000625999818956719"	""	"0"	"0.0001345"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"8/88"	"8"	"88"	"131032.568786621"	"HCD"	"MS2"	"11.44429"	"4.4"	"100.000"	"100.3770"	"34241"	"34241"	"34237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"4.8"	""	"2.1"	""	"10.5"	""	"13.0"	"8.3"	""	"279"	"54"	"31.000"	"24.000"	"5.55359502922128E-05"	""	"0"	"3.36E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"7/88"	"7"	"88"	"164728.382446289"	"HCD"	"MS2"	"8.853816"	"4.8"	"100.000"	"93.5844"	"32283"	"32283"	"32278"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.2"	""	"5.3"	""	"6.1"	""	"11.0"	""	"8.5"	"11.0"	""	"279"	"44"	"31.000"	"24.000"	"0.000596450226181462"	""	"0"	"0.0001001"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7358"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"8/88"	"8"	"88"	"133810.251037598"	"HCD"	"MS2"	"11.03854"	"4.2"	"100.000"	"102.1986"	"34661"	"34661"	"34658"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"3.9"	""	"6.4"	""	"8.8"	""	"8.0"	"9.4"	""	"279"	"53"	"31.000"	"24.000"	"6.46508453032121E-05"	""	"0"	"1.572E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6863"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"7/88"	"7"	"88"	"148036.764465332"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"92.0363"	"31752"	"31752"	"31746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.4"	""	"5.4"	""	"9.2"	""	"11.3"	""	"8.7"	"11.5"	""	"279"	"51"	"31.000"	"24.000"	"0.000108536098870053"	""	"0"	"2.025E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"7/88"	"7"	"88"	"156381.78503418"	"HCD"	"MS2"	"11.08277"	"5.7"	"100.000"	"93.8321"	"32335"	"32335"	"32327"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"3.8"	""	"8.4"	""	"15.9"	""	"11.0"	"9.7"	""	"279"	"37"	"31.000"	"24.000"	"0.00291456810254138"	"23"	"0"	"4.248E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"7/88"	"7"	"88"	"235551.648681641"	"HCD"	"MS2"	"12.26104"	"3.2"	"100.000"	"116.0105"	"37078"	"37078"	"37074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.0"	""	"3.7"	""	"3.7"	""	"8.8"	""	"6.2"	"6.6"	""	"279"	"39"	"31.000"	"24.000"	"0.00193007509866563"	"22"	"0.0001859"	"0.0003576"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"9/88"	"9"	"88"	"217498.177368164"	"HCD"	"MS2"	"11.87725"	"7.2"	"100.000"	"84.1496"	"28738"	"28738"	"28708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"9.6"	""	"7.4"	""	"15.6"	""	"15.6"	"12.8"	""	"279"	"62"	"31.000"	"24.000"	"8.36708551376435E-06"	""	"0"	"4.137E-06"	"1.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"6/88"	"6"	"88"	"142376.316223145"	"HCD"	"MS2"	"25.00379"	"5.5"	"100.000"	"93.9972"	"32414"	"32414"	"32408"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.0"	""	"8.0"	""	"7.7"	""	"11.0"	""	"12.4"	"7.2"	""	"279"	"26"	"31.000"	"24.000"	"0.0386878154598931"	"18"	"0.0001889"	"0.0004052"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8475"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"8/88"	"8"	"88"	"161317.855529785"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"99.7989"	"34105"	"34105"	"34098"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.4"	""	"4.6"	""	"6.0"	""	"5.9"	""	"8.7"	"5.8"	""	"279"	"59"	"31.000"	"24.000"	"1.58334008786288E-05"	""	"0"	"2.251E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6981"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"8/88"	"8"	"88"	"227858.620117188"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"86.3493"	"29626"	"29626"	"29601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"10.2"	""	"12.0"	""	"12.5"	""	"15.0"	"17.9"	""	"279"	"53"	"31.000"	"24.000"	"7.50886346610222E-05"	""	"0"	"1.177E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8431"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"8/88"	"8"	"88"	"186348.716674805"	"HCD"	"MS2"	"3.76551"	"3.6"	"100.000"	"95.6561"	"32918"	"32918"	"32912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	"3.2"	""	"5.2"	""	"10.7"	""	"5.5"	"5.8"	""	"279"	"51"	"31.000"	"24.000"	"0.000110299668605975"	"24"	"0"	"1.468E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8133"	"0.0000"	"1"	"1"	"1"	"527.66766"	"1580.98844"	"1580.98883"	"-0.25"	"-0.00013"	"10/88"	"10"	"88"	"33304800.7004395"	"HCD"	"MS2"	"5.196829"	"418.4"	"56.065"	"44.9866"	"12801"	"12801"	"12784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.3"	"2.4"	"147.3"	""	"311.5"	""	"401.8"	""	"2200.2"	"864.7"	""	"279"	"75"	"31.000"	"24.000"	"4.58748025071997E-07"	""	"0"	"2.197E-07"	"1.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"527.66772"	"1580.98862"	"1580.98883"	"-0.13"	"-0.00007"	"9/88"	"9"	"88"	"128563.770935059"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"89.1623"	"30715"	"30715"	"30707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	"3.6"	""	"7.2"	""	"9.3"	""	"6.5"	"9.6"	""	"279"	"74"	"31.000"	"24.000"	"5.95078428728221E-07"	""	"0"	"8.799E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"527.66772"	"1580.98862"	"1580.98883"	"-0.13"	"-0.00007"	"8/88"	"8"	"88"	"210921.306213379"	"HCD"	"MS2"	"18.44193"	"5.1"	"100.000"	"87.6393"	"30142"	"30142"	"30136"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"5.7"	""	"7.3"	""	"9.6"	""	"9.9"	"11.8"	""	"279"	"50"	"31.000"	"24.000"	"0.00014708697204658"	"19"	"0"	"2.996E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7255"	"0.0000"	"1"	"1"	"1"	"527.66772"	"1580.98862"	"1580.98883"	"-0.13"	"-0.00007"	"9/88"	"9"	"88"	"375267.28692627"	"HCD"	"MS2"	"39.08307"	"11.1"	"100.000"	"82.5341"	"28079"	"28079"	"28048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"14.5"	""	"13.8"	""	"26.3"	""	"20.1"	"21.7"	""	"279"	"51"	"31.000"	"24.000"	"0.00011549793183787"	""	"0"	"1.945E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"527.66772"	"1580.98862"	"1580.98883"	"-0.13"	"-0.00007"	"10/88"	"10"	"88"	"1053339626.01563"	"HCD"	"MS2"	"3.557578"	"150.6"	"0.782"	"43.4791"	"12187"	"12187"	"12171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.3"	""	"146.0"	""	"160.6"	""	"307.7"	""	"337.5"	"334.2"	""	"279"	"75"	"31.000"	"24.000"	"4.26161495293563E-07"	""	"0"	"8.77E-07"	"1.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7945"	"0.0000"	"1"	"1"	"1"	"527.66772"	"1580.98862"	"1580.98883"	"-0.13"	"-0.00007"	"10/88"	"10"	"88"	"1080144541.52344"	"HCD"	"MS2"	"4.014704"	"165.5"	"0.861"	"43.7568"	"12349"	"12349"	"12332"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.4"	"2.2"	"155.6"	""	"187.8"	""	"340.3"	""	"362.6"	"375.2"	""	"279"	"73"	"31.000"	"24.000"	"6.84816487232881E-07"	""	"0"	"5.195E-07"	"1.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8082"	"0.0000"	"1"	"1"	"1"	"527.66772"	"1580.98862"	"1580.98883"	"-0.13"	"-0.00007"	"10/88"	"10"	"88"	"64258552.1738281"	"HCD"	"MS2"	"8.148145"	"219.4"	"17.045"	"44.3440"	"12589"	"12589"	"12572"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.4"	""	"233.3"	""	"245.9"	""	"428.3"	""	"469.1"	"490.9"	""	"279"	"73"	"31.000"	"24.000"	"6.76977457726158E-07"	""	"0"	"5.219E-07"	"1.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8082"	"0.0000"	"1"	"1"	"1"	"527.66772"	"1580.98862"	"1580.98883"	"-0.13"	"-0.00007"	"10/88"	"10"	"88"	"16498525.3554688"	"HCD"	"MS2"	"3.853076"	"335.6"	"91.157"	"45.0229"	"12864"	"12864"	"12843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.3"	""	"218.7"	""	"313.4"	""	"476.0"	"9.3"	"1252.5"	"694.0"	""	"279"	"73"	"31.000"	"24.000"	"7.4400217920523E-07"	""	"0"	"1.771E-07"	"1.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.4848"	"0.0000"	"1"	"1"	"1"	"527.66779"	"1580.98880"	"1580.98883"	"-0.02"	"-0.00001"	"5/88"	"5"	"88"	"110818.717529297"	"HCD"	"MS2"	"11.48124"	"3.4"	"100.000"	"104.3227"	"35112"	"35112"	"35109"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.1"	""	"2.3"	""	"4.5"	""	"8.8"	""	"6.9"	"8.4"	""	"279"	"33"	"31.000"	"24.000"	"0.00728742683653771"	""	"0"	"0.000171"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"527.66779"	"1580.98880"	"1580.98883"	"-0.02"	"-0.00001"	"6/88"	"6"	"88"	"123625.730773926"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"96.3836"	"33129"	"33129"	"33124"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.1"	""	"5.0"	""	"6.3"	""	"9.0"	""	"6.2"	"12.2"	""	"279"	"27"	"31.000"	"24.000"	"0.0253264434956852"	"23"	"7.476E-05"	"0.0001961"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"527.66779"	"1580.98880"	"1580.98883"	"-0.02"	"-0.00001"	"7/88"	"7"	"88"	"118431.294311523"	"HCD"	"MS2"	"9.702253"	"3.1"	"100.000"	"106.4861"	"35487"	"35487"	"35483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.1"	""	"5.5"	""	"1.8"	""	"3.4"	""	"6.4"	"9.5"	""	"279"	"40"	"31.000"	"24.000"	"0.00144735214006613"	""	"0"	"4.888E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6744"	"0.0000"	"1"	"1"	"1"	"527.66779"	"1580.98880"	"1580.98883"	"-0.02"	"-0.00001"	"7/88"	"7"	"88"	"150546.841247559"	"HCD"	"MS2"	"41.61646"	"5.6"	"100.000"	"87.8373"	"30268"	"30268"	"30252"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"6.1"	""	"7.0"	""	"13.4"	""	"10.7"	"12.1"	""	"279"	"43"	"31.000"	"24.000"	"0.000678538051939588"	""	"0"	"4.266E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7708"	"0.0000"	"1"	"1"	"1"	"527.66779"	"1580.98880"	"1580.98883"	"-0.02"	"-0.00001"	"8/88"	"8"	"88"	"171315.697143555"	"HCD"	"MS2"	"5.429276"	"5.3"	"100.000"	"93.5655"	"32245"	"32245"	"32237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"5.9"	""	"11.7"	""	"8.4"	""	"8.0"	"11.5"	""	"279"	"48"	"31.000"	"24.000"	"0.000223138344991746"	""	"0"	"2.951E-05"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"527.66779"	"1580.98880"	"1580.98883"	"-0.02"	"-0.00001"	"10/88"	"10"	"88"	"205774.675109863"	"HCD"	"MS2"	"6.968895"	"4.3"	"100.000"	"98.2383"	"33675"	"33675"	"33671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"4.5"	""	"5.2"	""	"7.5"	""	"9.6"	"9.7"	""	"279"	"33"	"31.000"	"24.000"	"0.00737181126226375"	"23"	"0"	"0.0001825"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"527.66779"	"1580.98880"	"1580.98883"	"-0.02"	"-0.00001"	"10/88"	"10"	"88"	"545131006.208984"	"HCD"	"MS2"	"4.342503"	"241.7"	"2.419"	"43.7679"	"12304"	"12304"	"12290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.0"	"2.2"	"236.8"	""	"256.8"	""	"481.9"	""	"545.1"	"553.4"	""	"279"	"72"	"31.000"	"24.000"	"9.36643249831701E-07"	""	"0"	"9.749E-07"	"1.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"790.99811"	"1580.98894"	"1580.98883"	"0.07"	"0.00005"	"11/88"	"11"	"88"	"4055317.19207764"	"HCD"	"MS2"	"0"	"204.1"	"100.000"	"44.1580"	"12512"	"12512"	"12492"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"206.5"	""	"212.6"	""	"210.6"	""	"399.1"	""	"440.6"	"472.7"	""	"269"	"93"	"31.000"	"24.000"	"7.49414832313446E-09"	""	"0"	"1.65E-06"	"1.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"527.66785"	"1580.98899"	"1580.98883"	"0.10"	"0.00005"	"7/88"	"7"	"88"	"144101.678894043"	"HCD"	"MS2"	"41.97184"	"4.1"	"100.000"	"94.2930"	"32525"	"32525"	"32513"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"4.8"	""	"7.3"	""	"7.9"	""	"8.8"	"5.5"	""	"269"	"38"	"31.000"	"24.000"	"0.00207358710921716"	"23"	"0"	"0.0001346"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"527.66785"	"1580.98899"	"1580.98883"	"0.10"	"0.00005"	"8/88"	"8"	"88"	"134033.901550293"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"92.8877"	"32033"	"32033"	"32025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"5.3"	""	"2.6"	""	"9.0"	""	"8.8"	"12.9"	""	"269"	"48"	"31.000"	"24.000"	"0.000210728018929546"	"24"	"0"	"7.81E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.66785"	"1580.98899"	"1580.98883"	"0.10"	"0.00005"	"7/88"	"7"	"88"	"128465.942687988"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"110.8302"	"36238"	"36238"	"36235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.5"	""	"3.0"	""	"3.2"	""	"3.1"	""	"7.8"	"6.5"	""	"269"	"30"	"31.000"	"24.000"	"0.0140838789712846"	"14"	"0"	"8.012E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"527.66785"	"1580.98899"	"1580.98883"	"0.10"	"0.00005"	"8/88"	"8"	"88"	"269980.370239258"	"HCD"	"MS2"	"12.19409"	"9.9"	"100.000"	"78.4561"	"26416"	"26416"	"26385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.2"	""	"11.0"	""	"13.0"	""	"19.0"	""	"19.4"	"21.1"	""	"269"	"34"	"31.000"	"24.000"	"0.00569799789336633"	""	"0"	"2.263E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"527.66785"	"1580.98899"	"1580.98883"	"0.10"	"0.00005"	"11/88"	"11"	"88"	"3025885273.4375"	"HCD"	"MS2"	"4.041645"	"187.2"	"0.356"	"43.4705"	"12232"	"12232"	"12223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.9"	""	"169.7"	""	"208.5"	""	"380.8"	""	"427.1"	"414.7"	""	"269"	"76"	"31.000"	"24.000"	"3.18216199311835E-07"	""	"0"	"8.842E-07"	"1.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7875"	"0.0000"	"1"	"1"	"1"	"527.66785"	"1580.98899"	"1580.98883"	"0.10"	"0.00005"	"19/88"	"19"	"88"	"3615368733.65625"	"HCD"	"MS2"	"3.842916"	"232.1"	"0.342"	"42.9211"	"11967"	"11967"	"11956"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.2"	""	"223.9"	""	"238.8"	""	"500.5"	"5.8"	"496.0"	"508.7"	""	"269"	"80"	"31.000"	"24.000"	"1.25812063172846E-07"	""	"0"	"9.199E-07"	"1.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"527.66791"	"1580.98917"	"1580.98883"	"0.21"	"0.00011"	"7/88"	"7"	"88"	"215350.352600098"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"115.0708"	"36912"	"36912"	"36910"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.7"	""	"4.9"	""	""	""	"9.8"	""	"8.1"	"6.6"	""	"269"	"22"	"31.000"	"24.000"	"0.0819827126788028"	"17"	"0.0001889"	"0.0006116"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"527.66791"	"1580.98917"	"1580.98883"	"0.21"	"0.00011"	"8/88"	"8"	"88"	"216424.967102051"	"HCD"	"MS2"	"12.53189"	"4.4"	"100.000"	"97.8655"	"33573"	"33573"	"33569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"3.4"	""	"7.0"	""	"9.4"	""	"8.7"	"14.0"	""	"269"	"43"	"31.000"	"24.000"	"0.000699394615337578"	"22"	"0"	"2.62E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8133"	"0.0000"	"1"	"1"	"1"	"527.66791"	"1580.98917"	"1580.98883"	"0.21"	"0.00011"	"10/88"	"10"	"88"	"11933375.3765259"	"HCD"	"MS2"	"5.804999"	"250.5"	"100.000"	"44.6763"	"12674"	"12674"	"12657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"239.1"	""	"251.7"	""	"280.2"	""	"484.9"	"1.2"	"598.6"	"528.7"	""	"269"	"75"	"31.000"	"24.000"	"4.75031363370183E-07"	""	"0"	"2.66E-07"	"1.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"527.66797"	"1580.98935"	"1580.98883"	"0.33"	"0.00017"	"7/88"	"7"	"88"	"152495.31060791"	"HCD"	"MS2"	"5.812544"	"4.5"	"100.000"	"101.3460"	"34470"	"34470"	"34465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.0"	""	"4.8"	""	"6.6"	""	"9.3"	""	"10.3"	"8.1"	""	"269"	"39"	"31.000"	"24.000"	"0.00186089677971704"	""	"0"	"5.439E-05"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"527.66797"	"1580.98935"	"1580.98883"	"0.33"	"0.00017"	"9/88"	"9"	"88"	"181178.25982666"	"HCD"	"MS2"	"10.57678"	"6.2"	"100.000"	"87.1792"	"30014"	"30014"	"29991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.8"	""	"8.5"	""	"7.7"	""	"12.1"	""	"13.1"	"10.8"	""	"269"	"63"	"31.000"	"24.000"	"7.32356068073056E-06"	""	"0"	"4.213E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"527.66815"	"1580.98990"	"1580.98883"	"0.68"	"0.00036"	"8/88"	"8"	"88"	"161077.123840332"	"HCD"	"MS2"	"32.8824"	"5.0"	"100.000"	"94.1262"	"32444"	"32444"	"32435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"6.7"	""	"9.2"	""	"5.8"	""	"8.9"	"11.6"	""	"269"	"44"	"31.000"	"24.000"	"0.000584416251510764"	"21"	"0"	"4.372E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"527.66815"	"1580.98990"	"1580.98883"	"0.68"	"0.00036"	"7/88"	"7"	"88"	"155247.114013672"	"HCD"	"MS2"	"11.50834"	"5.5"	"100.000"	"89.8859"	"30994"	"30994"	"30973"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"6.1"	""	"3.9"	""	"13.6"	""	"10.5"	"13.2"	""	"269"	"50"	"31.000"	"24.000"	"0.000143787881255447"	"24"	"0"	"1.806E-05"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"527.66815"	"1580.98990"	"1580.98883"	"0.68"	"0.00036"	"8/88"	"8"	"88"	"240935.96661377"	"HCD"	"MS2"	"18.35047"	"8.6"	"100.000"	"82.8851"	"28222"	"28222"	"28192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"12.7"	""	"9.7"	""	"14.5"	""	"12.7"	"22.5"	""	"269"	"42"	"31.000"	"24.000"	"0.000790173179152549"	""	"0"	"5.768E-06"	"1.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"527.66827"	"1580.99027"	"1580.98883"	"0.91"	"0.00048"	"16/88"	"16"	"88"	"2974773514.84375"	"HCD"	"MS2"	"3.718468"	"185.6"	"0.349"	"43.1790"	"12065"	"12065"	"12058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"179.7"	""	"182.0"	""	"198.4"	""	"373.0"	""	"398.2"	"434.6"	""	"265"	"81"	"31.000"	"24.000"	"1.12257632373629E-07"	""	"0"	"1.25E-06"	"1.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8118"	"0.0000"	"1"	"1"	"1"	"527.66833"	"1580.99045"	"1580.98883"	"1.02"	"0.00054"	"19/88"	"19"	"88"	"641238159.148438"	"HCD"	"MS2"	"3.903589"	"194.6"	"1.614"	"44.0317"	"12461"	"12461"	"12447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.4"	""	"195.9"	""	"208.0"	""	"364.4"	"1.0"	"442.6"	"456.7"	""	"265"	"85"	"31.000"	"24.000"	"4.42808428034601E-08"	""	"0"	"5.129E-07"	"1.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8052"	"0.0000"	"1"	"1"	"1"	"527.66833"	"1580.99045"	"1580.98883"	"1.02"	"0.00054"	"10/88"	"10"	"88"	"62436362.5917969"	"HCD"	"MS2"	"6.703839"	"211.1"	"16.499"	"44.0593"	"12423"	"12423"	"12406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.5"	""	"215.3"	""	"246.0"	""	"414.6"	"0.4"	"473.1"	"455.4"	""	"265"	"77"	"31.000"	"24.000"	"2.85243579850979E-07"	""	"0"	"1.928E-07"	"1.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHK"	"[K].vVAGVASALAHk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"527.66840"	"1580.99063"	"1580.98883"	"1.14"	"0.00060"	"7/88"	"7"	"88"	"208220.67388916"	"HCD"	"MS2"	"5.562533"	"4.0"	"100.000"	"105.2025"	"35267"	"35267"	"35263"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	"3.8"	""	"3.4"	""	"10.3"	""	"9.0"	"8.7"	""	"265"	"45"	"31.000"	"24.000"	"0.000374296596676331"	"23"	"0"	"1.866E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KNIYIDK"	"[R].kNIYIDk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"1"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"527.67035"	"1580.99649"	"1580.99789"	"-0.88"	"-0.00047"	"5/60"	"5"	"60"	"19040887.8109741"	"HCD"	"MS2"	"17.97421"	"1025.2"	"93.491"	"34.7608"	"8627"	"8627"	"8606"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1906.3"	""	"1399.3"	""	"1416.3"	""	"1520.3"	""	"1635.9"	"1815.4"	""	"217"	"12"	"30.000"	"23.000"	"0.740337483143712"	"18"	"0.0006037"	"0.005367"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KNIYIDK"	"[R].kNIYIDk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"1"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"527.67065"	"1580.99741"	"1580.99789"	"-0.30"	"-0.00016"	"5/60"	"5"	"60"	"18686423.4199219"	"HCD"	"MS2"	"22.45779"	"1080.2"	"100.000"	"34.8066"	"8689"	"8689"	"8666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2005.8"	""	"1443.8"	""	"1494.8"	""	"1610.3"	""	"1760.5"	"1907.3"	""	"217"	"13"	"30.000"	"23.000"	"0.608737053995231"	"19"	"0.0004166"	"0.002417"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLLDTHLK"	"[R].iLGLLDTHLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"527.67578"	"1581.01279"	"1581.01398"	"-0.76"	"-0.00040"	"10/74"	"10"	"74"	"10647635.0596313"	"HCD"	"MS2"	"14.55814"	"302.1"	"88.276"	"62.3029"	"19893"	"19893"	"19875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"368.4"	""	"383.3"	""	"409.7"	""	"515.3"	""	"593.9"	"598.2"	""	"168"	"39"	"29.000"	"22.000"	"0.000966672326713326"	"18"	"0"	"1.819E-05"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLLDTHLK"	"[R].iLGLLDTHLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"3"	"3"	"0.8305"	"0.0000"	"1"	"1"	"1"	"527.67590"	"1581.01316"	"1581.01398"	"-0.52"	"-0.00028"	"15/74"	"15"	"74"	"13722685.9542236"	"HCD"	"MS2"	"9.697524"	"372.4"	"100.000"	"62.0104"	"19774"	"19774"	"19747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"483.5"	""	"498.7"	""	"536.4"	""	"678.5"	"0.1"	"662.8"	"667.3"	""	"168"	"59"	"29.000"	"22.000"	"1.14098329513321E-05"	""	"0"	"1.036E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLLDTHLK"	"[R].iLGLLDTHLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"527.67596"	"1581.01334"	"1581.01398"	"-0.41"	"-0.00021"	"11/74"	"11"	"74"	"11169098.7033691"	"HCD"	"MS2"	"15.33231"	"210.2"	"57.109"	"62.1758"	"19788"	"19788"	"19769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.6"	"3.7"	"264.3"	""	"299.7"	""	"373.7"	""	"407.2"	"396.0"	""	"164"	"33"	"29.000"	"22.000"	"0.00375676347105917"	"17"	"0"	"6.052E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLLDTHLK"	"[R].iLGLLDTHLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"3"	"3"	"0.7636"	"0.0000"	"1"	"1"	"1"	"527.67657"	"1581.01517"	"1581.01398"	"0.75"	"0.00040"	"12/74"	"12"	"74"	"12051386.111145"	"HCD"	"MS2"	"8.53297"	"329.6"	"100.000"	"61.8699"	"19663"	"19663"	"19641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"413.5"	""	"430.5"	""	"478.2"	""	"602.9"	"1.4"	"585.0"	"611.0"	""	"163"	"55"	"29.000"	"22.000"	"2.4052355197331E-05"	""	"0"	"1.248E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCQELSTLGK"	"[K].vcQELSTLGk.[D]"	"N-Term(TMT6plex); C2(Methylthio); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.96228"	"1581.87229"	"1581.87446"	"-1.37"	"-0.00072"	"12/92"	"12"	"92"	"2797864.925354"	"HCD"	"MS2"	"26.18069"	"91.9"	"100.000"	"60.7840"	"19220"	"19220"	"19193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.5"	""	"115.8"	""	"130.9"	""	"163.9"	""	"176.1"	"183.1"	""	"964"	"33"	"36.000"	"29.000"	"0.0264269497091852"	"15"	"0"	"9.921E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCQELSTLGK"	"[K].vcQELSTLGk.[D]"	"N-Term(TMT6plex); C2(Methylthio); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.44037"	"1581.87346"	"1581.87446"	"-0.63"	"-0.00050"	"16/92"	"16"	"92"	"1192246.35650635"	"HCD"	"MS2"	"16.71753"	"109.3"	"100.000"	"60.9407"	"19337"	"19337"	"19315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.2"	""	"151.1"	""	"148.0"	""	"179.4"	""	"186.5"	"228.4"	""	"947"	"55"	"36.000"	"29.000"	"0.000139739756882653"	"16"	"0"	"1.759E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCQELSTLGK"	"[K].vcQELSTLGk.[D]"	"N-Term(TMT6plex); C2(Methylthio); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.96271"	"1581.87357"	"1581.87446"	"-0.56"	"-0.00030"	"9/92"	"9"	"92"	"2907367.6114502"	"HCD"	"MS2"	"17.34418"	"90.4"	"100.000"	"60.9544"	"19343"	"19343"	"19315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.7"	""	"122.3"	""	"121.9"	""	"150.6"	""	"177.8"	"179.2"	""	"946"	"34"	"36.000"	"29.000"	"0.0201772112393153"	"15"	"0"	"0.0001806"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCQELSTLGK"	"[K].vcQELSTLGk.[D]"	"N-Term(TMT6plex); C2(Methylthio); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.9825"	"0.0000"	"1"	"1"	"1"	"791.44049"	"1581.87370"	"1581.87446"	"-0.48"	"-0.00038"	"16/92"	"16"	"92"	"1133842.33258057"	"HCD"	"MS2"	"20.97702"	"106.7"	"100.000"	"60.7682"	"19213"	"19213"	"19193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.7"	""	"147.9"	""	"151.0"	""	"174.0"	""	"180.0"	"219.4"	""	"946"	"57"	"36.000"	"29.000"	"8.66684721781583E-05"	"17"	"0"	"1.501E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KITISDCGQL"	"[K].kITISDcGQL.[-]"	"N-Term(TMT6plex); K1(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.96283"	"1581.87394"	"1581.87446"	"-0.33"	"-0.00017"	"9/94"	"9"	"94"	"6444632.42938232"	"HCD"	"MS2"	"3.257545"	"128.9"	"100.000"	"57.6309"	"17936"	"17936"	"17915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.4"	""	"184.4"	""	"210.6"	""	"192.2"	""	"209.2"	"256.8"	""	"946"	"30"	"36.000"	"29.000"	"0.0454842607675473"	"14"	"0.000523"	"0.003097"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KITISDCGQL"	"[K].kITISDcGQL.[-]"	"N-Term(TMT6plex); K1(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.96313"	"1581.87485"	"1581.87446"	"0.25"	"0.00013"	"9/94"	"9"	"94"	"6611643.23699951"	"HCD"	"MS2"	"20.9917"	"124.5"	"100.000"	"57.8205"	"18068"	"18068"	"18037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.0"	""	"195.9"	""	"176.4"	""	"199.0"	"0.2"	"205.3"	"242.6"	""	"949"	"30"	"36.000"	"29.000"	"0.0525092985497403"	"14"	"0.000523"	"0.002919"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KITISDCGQL"	"[K].kITISDcGQL.[-]"	"N-Term(TMT6plex); K1(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"1"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"791.44110"	"1581.87493"	"1581.87446"	"0.30"	"0.00023"	"16/94"	"16"	"94"	"4290592.644104"	"HCD"	"MS2"	"11.66789"	"198.5"	"100.000"	"57.7790"	"18051"	"18051"	"18021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.5"	""	"295.2"	""	"311.4"	""	"310.3"	"0.3"	"315.3"	"368.3"	""	"949"	"28"	"36.000"	"29.000"	"0.0818910079749352"	"18"	"0.003507"	"0.07872"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPFGAYGGLLK"	"[R].tPFGAYGGLLk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"527.98474"	"1581.93967"	"1581.94049"	"-0.52"	"-0.00027"	"7/80"	"7"	"80"	"9654418.60601807"	"HCD"	"MS2"	"23.49753"	"227.4"	"100.000"	"59.7517"	"18798"	"18798"	"18777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"389.3"	""	"324.7"	""	"328.3"	""	"327.3"	""	"382.0"	"403.6"	""	"553"	"40"	"34.000"	"27.000"	"0.00279058423000203"	"24"	"0"	"0.0001487"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTTAVITNK"	"[R].yLTTAVITNk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"527.99194"	"1581.96128"	"1581.96161"	"-0.21"	"-0.00011"	"6/84"	"6"	"84"	"8158259.8571167"	"HCD"	"MS2"	"58.19162"	"233.7"	"100.000"	"47.2586"	"13774"	"13774"	"13746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.9"	""	"318.4"	""	"322.9"	""	"370.6"	"1.6"	"437.4"	"486.7"	""	"434"	"16"	"33.000"	"26.000"	"0.566839013904628"	"16"	"0.0006037"	"0.004117"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTTAVITNK"	"[R].yLTTAVITNk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"527.99225"	"1581.96219"	"1581.96161"	"0.37"	"0.00019"	"6/84"	"6"	"84"	"7354204.94976807"	"HCD"	"MS2"	"45.2443"	"222.7"	"99.892"	"46.9950"	"13618"	"13618"	"13592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.0"	""	"307.2"	""	"318.3"	""	"337.9"	""	"424.7"	"444.8"	""	"441"	"14"	"33.000"	"26.000"	"0.80613651550694"	"16"	"0.0006737"	"0.006421"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPVEVLLK"	"[K].yYPVEVLLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WU06"	"Advillin OS=Rattus norvegicus OX=10116 GN=Avil PE=2 SV=1"	"Q9WU06"	"Advillin OS=Rattus norvegicus OX=10116 GN=Avil PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"791.48505"	"1581.96282"	"1581.96564"	"-1.78"	"-0.00141"	"13/64"	"13"	"64"	"868268.630249023"	"HCD"	"MS2"	"28.05826"	"64.7"	"100.000"	"68.1954"	"22290"	"22290"	"22266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.9"	""	"93.7"	""	"114.8"	""	"91.4"	""	"85.6"	"117.5"	""	"439"	"35"	"33.000"	"26.000"	"0.00733558112857321"	"22"	"0"	"0.0001283"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPVEVLLK"	"[K].yYPVEVLLk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WU06"	"Advillin OS=Rattus norvegicus OX=10116 GN=Avil PE=2 SV=1"	"Q9WU06"	"Advillin OS=Rattus norvegicus OX=10116 GN=Avil PE=2 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"791.48572"	"1581.96416"	"1581.96564"	"-0.93"	"-0.00074"	"12/64"	"12"	"64"	"854749.712646484"	"HCD"	"MS2"	"15.21067"	"66.4"	"100.000"	"68.2775"	"22272"	"22272"	"22250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.2"	""	"97.5"	""	"102.4"	""	"105.9"	"2.4"	"86.3"	"125.3"	""	"430"	"31"	"33.000"	"26.000"	"0.018468790712366"	"23"	"0.0001308"	"0.0002676"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEKFEK"	"[R].tIEkFEk.[E]"	"N-Term(TMT6plex); K4(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.99866"	"1581.98142"	"1581.98191"	"-0.31"	"-0.00016"	"6/64"	"6"	"64"	"24327647.1262817"	"HCD"	"MS2"	"15.96288"	"1035.5"	"66.646"	"35.2586"	"8831"	"8831"	"8811"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2900.2"	""	"2199.3"	""	"1990.3"	""	"942.1"	"0.2"	"858.8"	"808.9"	""	"322"	"1"	"32.000"	"25.000"	"11.9350948849448"	"13"	"0.003197"	"0.06529"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQAGPASVPLR"	"[K].kQAGPASVPLR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.99884"	"1581.98197"	"1581.98408"	"-1.34"	"-0.00070"	"8/100"	"8"	"100"	"3148223.34436035"	"HCD"	"MS2"	"5.524307"	"174.6"	"100.000"	"29.3382"	"6461"	"6461"	"6439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"261.3"	""	"256.6"	""	"249.6"	""	"267.1"	"1.9"	"324.7"	"291.7"	""	"323"	"14"	"32.000"	"25.000"	"0.701734012037088"	"13"	"0"	"6.138E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEKFEK"	"[R].tIEkFEk.[E]"	"N-Term(TMT6plex); K4(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.99890"	"1581.98215"	"1581.98191"	"0.16"	"0.00008"	"6/64"	"6"	"64"	"28724547.3779297"	"HCD"	"MS2"	"12.45673"	"937.1"	"48.137"	"35.3407"	"8908"	"8908"	"8890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2620.0"	""	"1963.1"	""	"1816.5"	""	"829.1"	""	"776.9"	"777.4"	""	"323"	"1"	"32.000"	"25.000"	"12.1666923542995"	"13"	"0.005698"	"0.1861"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPLIILAGK"	"[K].eGIPLIILAGk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62751"	"Iron-responsive element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ireb2 PE=1 SV=2"	"Q62751"	"Iron-responsive element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ireb2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"791.52209"	"1582.03691"	"1582.03439"	"1.60"	"0.00126"	"14/80"	"14"	"80"	"701546.947021484"	"HCD"	"MS2"	"0"	"41.7"	"100.000"	"73.5998"	"24445"	"24445"	"24417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.7"	""	"46.1"	""	"55.7"	""	"67.6"	""	"96.3"	"88.5"	""	"71"	"27"	"25.000"	"18.000"	"0.00769534957210991"	"17"	"0.0004166"	"0.002493"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPLTTESAMK"	"[K].fPLTTESAMk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"528.30054"	"1582.88706"	"1582.89149"	"-2.80"	"-0.00148"	"10/78"	"10"	"78"	"4580476.80932617"	"HCD"	"MS2"	"29.17066"	"141.9"	"100.000"	"48.9325"	"14411"	"14411"	"14383"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.3"	""	"211.1"	""	"214.0"	""	"201.3"	"1.0"	"270.2"	"230.8"	""	"870"	"22"	"36.000"	"29.000"	"0.2579225161923"	"14"	"0.0001889"	"0.0004558"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPLTTESAMK"	"[K].fPLTTESAMk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"791.94904"	"1582.89079"	"1582.89149"	"-0.44"	"-0.00035"	"9/78"	"9"	"78"	"3747188.05297852"	"HCD"	"MS2"	"38.7473"	"244.4"	"100.000"	"48.8957"	"14396"	"14396"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.4"	""	"438.8"	""	"439.8"	""	"264.0"	""	"424.8"	"375.0"	""	"828"	"46"	"36.000"	"29.000"	"0.00100925367880466"	"20"	"0"	"5.597E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPLTTESAMK"	"[K].fPLTTESAMk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"791.94928"	"1582.89128"	"1582.89149"	"-0.13"	"-0.00010"	"9/78"	"9"	"78"	"4177354.21380615"	"HCD"	"MS2"	"38.32351"	"258.4"	"100.000"	"49.2006"	"14568"	"14568"	"14542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.9"	""	"472.0"	""	"460.7"	""	"280.0"	"0.6"	"444.9"	"354.6"	""	"841"	"50"	"36.000"	"29.000"	"0.000393338085979045"	"21"	"0"	"9.863E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPLTTESAMK"	"[K].fPLTTESAMk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"528.30237"	"1582.89255"	"1582.89149"	"0.67"	"0.00035"	"13/78"	"13"	"78"	"4231511.27478027"	"HCD"	"MS2"	"60.47812"	"136.2"	"100.000"	"49.3549"	"14631"	"14631"	"14606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.2"	""	"203.7"	""	"215.5"	""	"193.4"	"7.1"	"255.1"	"232.7"	""	"837"	"31"	"36.000"	"29.000"	"0.0324859418309107"	"18"	"0.0001308"	"0.0003094"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISIFSSTEK"	"[K].iISIFSSTEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"0"	"2"	"2"	"0.5306"	"0.0000"	"1"	"1"	"1"	"791.97632"	"1582.94536"	"1582.94563"	"-0.17"	"-0.00014"	"9/84"	"9"	"84"	"1451040.16253662"	"HCD"	"MS2"	"12.7707"	"118.7"	"100.000"	"62.0472"	"19789"	"19789"	"19763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.0"	""	"146.1"	""	"178.7"	""	"218.0"	""	"232.8"	"213.5"	""	"536"	"49"	"34.000"	"27.000"	"0.000353292805933117"	""	"0"	"7.258E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISIFSSTEK"	"[K].iISIFSSTEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"791.97656"	"1582.94585"	"1582.94563"	"0.14"	"0.00011"	"6/84"	"6"	"84"	"1298889.30743408"	"HCD"	"MS2"	"0"	"92.0"	"100.000"	"62.0424"	"19734"	"19734"	"19705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.8"	""	"106.5"	""	"125.0"	""	"170.7"	""	"177.3"	"169.9"	""	"545"	"22"	"34.000"	"27.000"	"0.18679554170835"	"25"	"0.0001859"	"0.0003592"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVIGAGVSGLAAIR"	"[K].vAVIGAGVSGLAAIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.9467"	"0.0000"	"1"	"1"	"1"	"791.99585"	"1582.98442"	"1582.98419"	"0.15"	"0.00012"	"14/112"	"14"	"112"	"1193324.54956055"	"HCD"	"MS2"	"16.09949"	"69.9"	"100.000"	"60.5488"	"19124"	"19124"	"19097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.9"	""	"101.8"	""	"103.1"	""	"112.4"	""	"133.0"	"141.3"	""	"302"	"75"	"31.000"	"24.000"	"4.41547009054343E-07"	"21"	"0"	"6.001E-07"	"1.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHYGLPVVVK"	"[R].lHYGLPVVVk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"528.34106"	"1583.00864"	"1583.00851"	"0.09"	"0.00004"	"8/74"	"8"	"74"	"14542599.230896"	"HCD"	"MS2"	"38.85204"	"252.5"	"81.976"	"46.4770"	"13406"	"13406"	"13384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.3"	"3.0"	"358.4"	""	"352.7"	""	"410.1"	"1.7"	"479.7"	"479.3"	""	"183"	"35"	"29.000"	"22.000"	"0.0027569005121303"	"15"	"0"	"6.045E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHYGLPVVVK"	"[R].lHYGLPVVVk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"528.34167"	"1583.01047"	"1583.00851"	"1.24"	"0.00066"	"12/74"	"12"	"74"	"14265366.9036865"	"HCD"	"MS2"	"44.92801"	"295.2"	"100.000"	"46.7276"	"13556"	"13556"	"13538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.3"	""	"433.8"	""	"414.6"	""	"457.8"	"3.2"	"554.7"	"568.8"	""	"170"	"32"	"29.000"	"22.000"	"0.00545028140097388"	"14"	"0.0001308"	"0.0002769"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWMSSSLTLK"	"[R].gWmSSSLTLk.[V]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"792.44629"	"1583.88530"	"1583.88674"	"-0.91"	"-0.00072"	"8/80"	"8"	"80"	"2422350.0447998"	"HCD"	"MS2"	"0"	"195.3"	"100.000"	"46.4012"	"13375"	"13375"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.2"	""	"208.9"	""	"195.5"	""	"493.9"	""	"416.4"	"404.8"	""	"872"	"47"	"36.000"	"29.000"	"0.000942945276344981"	"26"	"0.000523"	"0.002999"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWMSSSLTLK"	"[R].gWmSSSLTLk.[V]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"792.44696"	"1583.88664"	"1583.88674"	"-0.06"	"-0.00005"	"8/80"	"8"	"80"	"2588132.83575439"	"HCD"	"MS2"	"0"	"201.3"	"100.000"	"46.7069"	"13548"	"13548"	"13522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.2"	""	"207.9"	""	"197.8"	""	"502.2"	"0.3"	"420.5"	"438.8"	""	"865"	"45"	"36.000"	"29.000"	"0.00135202932628111"	"23"	"0.0003571"	"0.001538"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYQFTAASPK"	"[R].iYQFTAASPk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q920G0"	"Src kinase-associated phosphoprotein 2 OS=Rattus norvegicus OX=10116 GN=Skap2 PE=1 SV=1"	"Q920G0"	"Src kinase-associated phosphoprotein 2 OS=Rattus norvegicus OX=10116 GN=Skap2 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"792.46283"	"1583.91838"	"1583.91975"	"-0.86"	"-0.00068"	"6/92"	"6"	"92"	"455890.356506348"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"45.1360"	"12862"	"12862"	"12832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.0"	""	"66.2"	""	"78.2"	""	"69.5"	""	"97.2"	"95.3"	""	"627"	"33"	"34.000"	"27.000"	"0.0145961240319447"	"22"	"0"	"0.0001608"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAIVDVIDQNR"	"[K].lVAIVDVIDQNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"528.64819"	"1583.93003"	"1583.93182"	"-1.13"	"-0.00060"	"11/98"	"11"	"98"	"465356.107055664"	"HCD"	"MS2"	"26.50566"	"18.6"	"100.000"	"72.2605"	"23950"	"23950"	"23919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.2"	""	"26.2"	""	"25.6"	""	"30.0"	"1.2"	"31.7"	"36.6"	""	"575"	"32"	"34.000"	"27.000"	"0.0180983027571444"	"16"	"0.0001889"	"0.0004984"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAIVDVIDQNR"	"[K].lVAIVDVIDQNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"528.64874"	"1583.93167"	"1583.93182"	"-0.09"	"-0.00005"	"12/98"	"12"	"98"	"668519.88848877"	"HCD"	"MS2"	"6.397001"	"17.8"	"100.000"	"72.2320"	"23887"	"23887"	"23857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.0"	""	"20.8"	""	"22.7"	""	"30.3"	""	"36.5"	"32.8"	""	"572"	"48"	"34.000"	"27.000"	"0.000489064380115822"	"22"	"0"	"5.656E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAIVDVIDQNR"	"[K].lVAIVDVIDQNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"792.46954"	"1583.93181"	"1583.93182"	"-0.01"	"-0.00001"	"10/98"	"10"	"98"	"667681.641296387"	"HCD"	"MS2"	"25.17955"	"42.6"	"100.000"	"72.1383"	"23900"	"23900"	"23871"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.3"	""	"53.6"	""	"66.0"	""	"74.0"	""	"81.7"	"75.0"	""	"570"	"38"	"34.000"	"27.000"	"0.00492997662376304"	"20"	"0"	"1.963E-05"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAIVDVIDQNR"	"[K].lVAIVDVIDQNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"792.46973"	"1583.93218"	"1583.93182"	"0.22"	"0.00018"	"16/98"	"16"	"98"	"576289.227111816"	"HCD"	"MS2"	"14.43535"	"35.6"	"100.000"	"72.2229"	"23883"	"23883"	"23857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.6"	""	"48.5"	""	"45.7"	""	"65.1"	"1.0"	"64.8"	"63.2"	""	"563"	"53"	"34.000"	"27.000"	"0.000142717884379329"	"18"	"0"	"6.984E-06"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFGFSLITNK"	"[R].vFGFSLITNk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"528.65601"	"1583.95346"	"1583.95614"	"-1.69"	"-0.00089"	"7/80"	"7"	"80"	"4688366.91082764"	"HCD"	"MS2"	"18.05167"	"122.4"	"100.000"	"70.4600"	"23214"	"23214"	"23194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.0"	""	"199.6"	""	"227.1"	""	"207.9"	""	"188.1"	"224.5"	""	"455"	"39"	"33.000"	"26.000"	"0.00291059246695837"	"16"	"0"	"0.000168"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFGFSLITNK"	"[R].vFGFSLITNk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"528.65668"	"1583.95548"	"1583.95614"	"-0.41"	"-0.00022"	"7/80"	"7"	"80"	"4483876.98944092"	"HCD"	"MS2"	"14.14211"	"119.5"	"100.000"	"70.5419"	"23196"	"23196"	"23171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.8"	"3.0"	"210.7"	""	"231.0"	""	"182.4"	"0.7"	"173.6"	"208.3"	""	"419"	"42"	"33.000"	"26.000"	"0.00128879554832717"	"16"	"0.0001308"	"0.0002542"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFGFSLITNK"	"[R].vFGFSLITNk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"528.65680"	"1583.95584"	"1583.95614"	"-0.18"	"-0.00010"	"8/80"	"8"	"80"	"1027002.37005615"	"HCD"	"MS2"	"11.64106"	"37.0"	"100.000"	"70.7848"	"23347"	"23347"	"23322"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.9"	""	"50.6"	""	"54.1"	""	"56.1"	"0.1"	"67.0"	"76.6"	""	"419"	"17"	"33.000"	"26.000"	"0.41608688518637"	"14"	"0.0004166"	"0.002287"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVAAQNCYK"	"[K].iAVAAQNcYk.[V]"	"N-Term(TMT6plex); C8(Methylthio); K10(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"792.93481"	"1584.86235"	"1584.86423"	"-1.18"	"-0.00094"	"9/82"	"9"	"82"	"1319970.18963623"	"HCD"	"MS2"	"0"	"115.6"	"100.000"	"45.0412"	"12872"	"12872"	"12843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.4"	""	"149.9"	""	"176.6"	""	"160.2"	"0.5"	"202.4"	"242.7"	""	"887"	"58"	"36.000"	"29.000"	"7.44549582037354E-05"	"23"	"0"	"1.979E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVAAQNCYK"	"[K].iAVAAQNcYk.[V]"	"N-Term(TMT6plex); C8(Methylthio); K10(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.93634"	"1584.86540"	"1584.86423"	"0.74"	"0.00059"	"9/82"	"9"	"82"	"1258969.831604"	"HCD"	"MS2"	"8.763763"	"106.5"	"100.000"	"44.8898"	"12761"	"12761"	"12736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.4"	""	"164.3"	""	"164.3"	""	"156.8"	"4.1"	"170.2"	"182.9"	""	"881"	"9"	"36.000"	"29.000"	"4.98822360005263"	"13"	"0.0001859"	"0.0003708"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HMGLFDHAAK"	"[R].hMGLFDHAAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"396.97287"	"1584.86965"	"1584.87209"	"-1.54"	"-0.00061"	"8/72"	"8"	"72"	"9186242.03295898"	"HCD"	"MS2"	"28.14157"	"367.4"	"75.878"	"31.6012"	"7345"	"7345"	"7318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"541.1"	""	"534.3"	""	"565.4"	""	"563.4"	"0.3"	"671.0"	"602.0"	""	"874"	"5"	"36.000"	"29.000"	"15.5053451095072"	"13"	"0.0005564"	"0.003315"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HMGLFDHAAK"	"[R].hMGLFDHAAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"396.97318"	"1584.87087"	"1584.87209"	"-0.77"	"-0.00030"	"9/72"	"9"	"72"	"12669673.6484375"	"HCD"	"MS2"	"25.41447"	"323.9"	"45.241"	"31.6951"	"7425"	"7425"	"7402"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"553.4"	""	"483.2"	""	"514.0"	""	"447.6"	"2.3"	"526.4"	"534.1"	""	"871"	"32"	"36.000"	"29.000"	"0.025176082864519"	"15"	"0.0001308"	"0.0002277"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTIK"	"[KR].fDVSGYPTIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"792.95306"	"1584.89885"	"1584.90377"	"-3.10"	"-0.00246"	"9/84"	"9"	"84"	"2400312.77685547"	"HCD"	"MS2"	"0"	"202.5"	"100.000"	"53.1602"	"16127"	"16127"	"16119"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.5"	""	"282.6"	""	"271.5"	""	"328.3"	""	"370.3"	"350.6"	""	"797"	"64"	"36.000"	"29.000"	"1.52555660211754E-05"	"22"	"0"	"4.166E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTLK"	"[KR].fDVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"792.95306"	"1584.89885"	"1584.90377"	"-3.10"	"-0.00246"	"9/84"	"9"	"84"	"2400312.77685547"	"HCD"	"MS2"	"0"	"202.5"	"100.000"	"53.1602"	"16127"	"16127"	"16119"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.5"	""	"282.6"	""	"271.5"	""	"328.3"	""	"370.3"	"350.6"	""	"797"	"64"	"36.000"	"29.000"	"1.52555660211754E-05"	"22"	"0"	"4.166E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTIK"	"[KR].fDVSGYPTIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"792.95355"	"1584.89983"	"1584.90377"	"-2.48"	"-0.00197"	"9/84"	"9"	"84"	"1732190.4866333"	"HCD"	"MS2"	"0"	"146.4"	"100.000"	"53.6356"	"16365"	"16365"	"16355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.0"	""	"180.6"	""	"199.3"	""	"236.4"	""	"274.6"	"266.0"	""	"794"	"60"	"35.000"	"28.000"	"3.57100539867424E-05"	"22"	"0"	"3.297E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTLK"	"[KR].fDVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"792.95355"	"1584.89983"	"1584.90377"	"-2.48"	"-0.00197"	"9/84"	"9"	"84"	"1732190.4866333"	"HCD"	"MS2"	"0"	"146.4"	"100.000"	"53.6356"	"16365"	"16365"	"16355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.0"	""	"180.6"	""	"199.3"	""	"236.4"	""	"274.6"	"266.0"	""	"794"	"60"	"35.000"	"28.000"	"3.57100539867424E-05"	"22"	"0"	"3.297E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTIK"	"[KR].fDVSGYPTIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"528.97150"	"1584.89994"	"1584.90377"	"-2.42"	"-0.00128"	"10/84"	"10"	"84"	"4260477.51916504"	"HCD"	"MS2"	"25.41488"	"125.6"	"100.000"	"53.1843"	"16135"	"16135"	"16128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.1"	""	"165.3"	""	"173.9"	""	"203.0"	"1.1"	"217.8"	"242.4"	""	"786"	"31"	"35.000"	"28.000"	"0.0302268263032637"	"15"	"0.0005564"	"0.003619"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTLK"	"[KR].fDVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"528.97150"	"1584.89994"	"1584.90377"	"-2.42"	"-0.00128"	"10/84"	"10"	"84"	"4260477.51916504"	"HCD"	"MS2"	"25.41488"	"125.6"	"100.000"	"53.1843"	"16135"	"16135"	"16128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.1"	""	"165.3"	""	"173.9"	""	"203.0"	"1.1"	"217.8"	"242.4"	""	"786"	"31"	"35.000"	"28.000"	"0.0302268263032637"	"15"	"0.0005564"	"0.003619"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTIK"	"[KR].fDVSGYPTIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"792.95380"	"1584.90032"	"1584.90377"	"-2.18"	"-0.00172"	"9/84"	"9"	"84"	"2492402.17663574"	"HCD"	"MS2"	"0"	"212.7"	"100.000"	"53.3539"	"16256"	"16256"	"16247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.9"	""	"284.4"	""	"284.4"	""	"353.0"	"1.6"	"372.1"	"372.6"	""	"798"	"62"	"36.000"	"29.000"	"2.43765867937323E-05"	"22"	"0"	"4.455E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTLK"	"[KR].fDVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"792.95380"	"1584.90032"	"1584.90377"	"-2.18"	"-0.00172"	"9/84"	"9"	"84"	"2492402.17663574"	"HCD"	"MS2"	"0"	"212.7"	"100.000"	"53.3539"	"16256"	"16256"	"16247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.9"	""	"284.4"	""	"284.4"	""	"353.0"	"1.6"	"372.1"	"372.6"	""	"798"	"62"	"36.000"	"29.000"	"2.43765867937323E-05"	"22"	"0"	"4.455E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTIK"	"[KR].fDVSGYPTIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"792.95459"	"1584.90190"	"1584.90377"	"-1.18"	"-0.00093"	"9/84"	"9"	"84"	"1927561.22143555"	"HCD"	"MS2"	"0"	"161.5"	"100.000"	"53.4385"	"16232"	"16232"	"16221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.0"	""	"197.4"	""	"219.0"	""	"250.3"	"0.5"	"288.3"	"315.5"	""	"779"	"53"	"35.000"	"28.000"	"0.000189455606616824"	"23"	"0"	"3.482E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTLK"	"[KR].fDVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"792.95459"	"1584.90190"	"1584.90377"	"-1.18"	"-0.00093"	"9/84"	"9"	"84"	"1927561.22143555"	"HCD"	"MS2"	"0"	"161.5"	"100.000"	"53.4385"	"16232"	"16232"	"16221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.0"	""	"197.4"	""	"219.0"	""	"250.3"	"0.5"	"288.3"	"315.5"	""	"779"	"53"	"35.000"	"28.000"	"0.000189455606616824"	"23"	"0"	"3.482E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTIK"	"[KR].fDVSGYPTIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"528.97229"	"1584.90232"	"1584.90377"	"-0.91"	"-0.00048"	"9/84"	"9"	"84"	"4828129.55535889"	"HCD"	"MS2"	"53.81207"	"165.5"	"100.000"	"53.4135"	"16279"	"16279"	"16264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.0"	""	"205.1"	""	"223.9"	""	"280.8"	"0.2"	"313.8"	"312.8"	""	"764"	"24"	"35.000"	"28.000"	"0.140949442653798"	"21"	"0.0006037"	"0.004638"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTLK"	"[KR].fDVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"528.97229"	"1584.90232"	"1584.90377"	"-0.91"	"-0.00048"	"9/84"	"9"	"84"	"4828129.55535889"	"HCD"	"MS2"	"53.81207"	"165.5"	"100.000"	"53.4135"	"16279"	"16279"	"16264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.0"	""	"205.1"	""	"223.9"	""	"280.8"	"0.2"	"313.8"	"312.8"	""	"764"	"24"	"35.000"	"28.000"	"0.140949442653798"	"21"	"0.0006037"	"0.004638"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTIK"	"[KR].fDVSGYPTIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"792.95514"	"1584.90300"	"1584.90377"	"-0.48"	"-0.00038"	"9/84"	"9"	"84"	"901305.08404541"	"HCD"	"MS2"	"0"	"94.7"	"100.000"	"55.2126"	"16948"	"16948"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.2"	""	"142.2"	""	"123.5"	""	"142.9"	""	"182.4"	"173.6"	""	"765"	"27"	"35.000"	"28.000"	"0.06849067391685"	"19"	"0"	"0.0001503"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTLK"	"[KR].fDVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"792.95514"	"1584.90300"	"1584.90377"	"-0.48"	"-0.00038"	"9/84"	"9"	"84"	"901305.08404541"	"HCD"	"MS2"	"0"	"94.7"	"100.000"	"55.2126"	"16948"	"16948"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.2"	""	"142.2"	""	"123.5"	""	"142.9"	""	"182.4"	"173.6"	""	"765"	"27"	"35.000"	"28.000"	"0.06849067391685"	"19"	"0"	"0.0001503"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTIK"	"[KR].fDVSGYPTIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"792.95593"	"1584.90459"	"1584.90377"	"0.52"	"0.00041"	"9/84"	"9"	"84"	"4013667.11053467"	"HCD"	"MS2"	"12.31278"	"306.6"	"100.000"	"55.0970"	"16954"	"16954"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"491.0"	""	"409.4"	""	"422.4"	""	"498.0"	"1.4"	"541.1"	"538.5"	""	"752"	"60"	"35.000"	"28.000"	"3.46089038979193E-05"	"22"	"0"	"6.316E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTLK"	"[KR].fDVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"792.95593"	"1584.90459"	"1584.90377"	"0.52"	"0.00041"	"9/84"	"9"	"84"	"4013667.11053467"	"HCD"	"MS2"	"12.31278"	"306.6"	"100.000"	"55.0970"	"16954"	"16954"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"491.0"	""	"409.4"	""	"422.4"	""	"498.0"	"1.4"	"541.1"	"538.5"	""	"752"	"60"	"35.000"	"28.000"	"3.46089038979193E-05"	"22"	"0"	"6.316E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTIK"	"[KR].fDVSGYPTIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"792.95593"	"1584.90459"	"1584.90377"	"0.52"	"0.00041"	"9/84"	"9"	"84"	"3515789.62780762"	"HCD"	"MS2"	"0"	"281.7"	"100.000"	"54.9024"	"16821"	"16821"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"435.7"	""	"417.3"	""	"361.5"	""	"474.4"	"0.3"	"498.2"	"479.0"	""	"752"	"60"	"35.000"	"28.000"	"3.58251357672893E-05"	"22"	"0"	"5.546E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTLK"	"[KR].fDVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"792.95593"	"1584.90459"	"1584.90377"	"0.52"	"0.00041"	"9/84"	"9"	"84"	"3515789.62780762"	"HCD"	"MS2"	"0"	"281.7"	"100.000"	"54.9024"	"16821"	"16821"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"435.7"	""	"417.3"	""	"361.5"	""	"474.4"	"0.3"	"498.2"	"479.0"	""	"752"	"60"	"35.000"	"28.000"	"3.58251357672893E-05"	"22"	"0"	"5.546E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTIK"	"[KR].fDVSGYPTIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"792.95630"	"1584.90532"	"1584.90377"	"0.98"	"0.00078"	"14/84"	"14"	"84"	"794253.764404297"	"HCD"	"MS2"	"0"	"89.6"	"100.000"	"55.4209"	"17087"	"17087"	"17061"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.0"	""	"129.1"	""	"127.6"	""	"133.6"	"1.1"	"169.8"	"154.2"	""	"737"	"44"	"35.000"	"28.000"	"0.0015397049010928"	"19"	"0"	"0.000117"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDVSGYPTLK"	"[KR].fDVSGYPTLk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"792.95630"	"1584.90532"	"1584.90377"	"0.98"	"0.00078"	"14/84"	"14"	"84"	"794253.764404297"	"HCD"	"MS2"	"0"	"89.6"	"100.000"	"55.4209"	"17087"	"17087"	"17061"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.0"	""	"129.1"	""	"127.6"	""	"133.6"	"1.1"	"169.8"	"154.2"	""	"737"	"44"	"35.000"	"28.000"	"0.0015397049010928"	"19"	"0"	"0.000117"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMISDFGLSK"	"[K].imISDFGLSk.[M]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63450"	"Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus OX=10116 GN=Camk1 PE=1 SV=2"	"Q63450"	"Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus OX=10116 GN=Camk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.95715"	"1584.90703"	"1584.90714"	"-0.07"	"-0.00005"	"14/82"	"14"	"82"	"748173.86706543"	"HCD"	"MS2"	"0"	"56.6"	"100.000"	"61.7751"	"19678"	"19678"	"19651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.9"	""	"63.0"	""	"71.3"	""	"124.5"	""	"100.9"	"111.0"	""	"738"	"22"	"35.000"	"28.000"	"0.21828624301075"	"14"	"0.0006037"	"0.004902"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMISDFGLSK"	"[K].imISDFGLSk.[M]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63450"	"Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus OX=10116 GN=Camk1 PE=1 SV=2"	"Q63450"	"Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus OX=10116 GN=Camk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.95728"	"1584.90727"	"1584.90714"	"0.09"	"0.00007"	"9/82"	"9"	"82"	"782984.357421875"	"HCD"	"MS2"	"0"	"58.3"	"100.000"	"61.6116"	"19558"	"19558"	"19529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.2"	""	"63.3"	""	"69.8"	""	"128.8"	"1.0"	"109.3"	"109.4"	""	"735"	"34"	"35.000"	"28.000"	"0.0138120246076003"	"15"	"0.0002723"	"0.001364"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLHPAVHAGILAR"	"[K].tLHPAVHAGILAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"396.99338"	"1584.95168"	"1584.95356"	"-1.19"	"-0.00047"	"10/96"	"10"	"96"	"29408998.2614746"	"HCD"	"MS2"	"53.19214"	"331.8"	"62.399"	"29.9174"	"6657"	"6657"	"6634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"502.7"	""	"519.0"	""	"503.2"	""	"481.0"	"1.0"	"563.3"	"568.7"	""	"495"	"51"	"33.000"	"26.000"	"0.000196144079293917"	"16"	"0"	"1.366E-05"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLHPAVHAGILAR"	"[K].tLHPAVHAGILAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"528.98889"	"1584.95212"	"1584.95356"	"-0.91"	"-0.00048"	"8/96"	"8"	"96"	"6121122.53326416"	"HCD"	"MS2"	"37.34138"	"227.3"	"100.000"	"30.0048"	"6693"	"6693"	"6666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.1"	""	"279.2"	""	"293.3"	""	"440.1"	""	"447.7"	"418.3"	""	"514"	"15"	"34.000"	"27.000"	"0.732711694748505"	"13"	"0"	"0.000134"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLHPAVHAGILAR"	"[K].tLHPAVHAGILAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"396.99353"	"1584.95229"	"1584.95356"	"-0.80"	"-0.00032"	"10/96"	"10"	"96"	"30227982.4935303"	"HCD"	"MS2"	"28.23288"	"277.9"	"55.863"	"30.0053"	"6734"	"6734"	"6713"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.3"	""	"410.7"	""	"448.6"	""	"402.4"	""	"473.7"	"466.4"	""	"509"	"55"	"34.000"	"27.000"	"8.42728704173194E-05"	"16"	"0"	"9.419E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWGVPQDLIK"	"[K].aWGVPQDLIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8CF97"	"Deubiquitinating protein VCIP135 OS=Rattus norvegicus OX=10116 GN=Vcpip1 PE=1 SV=2"	"Q8CF97"	"Deubiquitinating protein VCIP135 OS=Rattus norvegicus OX=10116 GN=Vcpip1 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"792.98022"	"1584.95317"	"1584.95138"	"1.13"	"0.00089"	"10/80"	"10"	"80"	"709613.677490234"	"HCD"	"MS2"	"46.3213"	"66.5"	"100.000"	"60.3090"	"19026"	"19026"	"19001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.9"	""	"106.7"	""	"106.1"	""	"96.3"	""	"108.6"	"110.0"	""	"509"	"26"	"34.000"	"27.000"	"0.0607697971501404"	"20"	"0.0003839"	"0.001746"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNIIQPGPIKTK"	"[R].fNIIQPGPIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"1"	"3"	"3"	"0.1064"	"0.0000"	"1"	"1"	"1"	"529.00043"	"1584.98673"	"1584.96748"	"12.14"	"0.00642"	"10/108"	"10"	"108"	"8191674.69055176"	"HCD"	"MS2"	"7.676184"	"186.9"	"100.000"	"56.9352"	"17652"	"17652"	"17627"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"291.7"	""	"289.0"	""	"247.1"	""	"299.2"	"2.9"	"312.3"	"326.1"	""	"305"	"47"	"31.000"	"24.000"	"0.000295304349501857"	""	"0.004007"	"0.1037"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNIIQPGPIKTK"	"[R].fNIIQPGPIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"1"	"3"	"3"	"0.0889"	"0.0000"	"1"	"1"	"1"	"529.00061"	"1584.98728"	"1584.96748"	"12.49"	"0.00660"	"10/108"	"10"	"108"	"8440866.0736084"	"HCD"	"MS2"	"8.672738"	"169.1"	"100.000"	"57.1363"	"17788"	"17788"	"17765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.8"	""	"268.2"	""	"227.9"	""	"256.3"	"3.4"	"285.4"	"288.1"	""	"305"	"45"	"31.000"	"24.000"	"0.000460542637361307"	""	"0.003788"	"0.09197"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGLDNAGK"	"[R].iLLLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"0"	"2"	"2"	"0.7018"	"0.0000"	"1"	"1"	"1"	"793.00732"	"1585.00737"	"1585.00890"	"-0.96"	"-0.00076"	"18/86"	"18"	"86"	"705438.702453613"	"HCD"	"MS2"	"0"	"56.1"	"100.000"	"69.4650"	"22757"	"22757"	"22730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.6"	""	"66.3"	""	"85.7"	""	"100.8"	""	"96.7"	"109.4"	""	"206"	"57"	"30.000"	"23.000"	"2.29528820374841E-05"	""	"0"	"5.188E-06"	"1.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGLDNAGK"	"[R].iLLLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"529.00732"	"1585.00742"	"1585.00890"	"-0.93"	"-0.00049"	"8/86"	"8"	"86"	"2540032.59057617"	"HCD"	"MS2"	"4.981392"	"72.1"	"100.000"	"69.4496"	"22802"	"22802"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.9"	""	"79.5"	""	"113.3"	""	"132.8"	""	"126.1"	"143.8"	""	"206"	"56"	"30.000"	"23.000"	"2.58129253062308E-05"	""	"0.0001308"	"0.0002144"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGLDNAGK"	"[R].iLLLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"793.00818"	"1585.00908"	"1585.00890"	"0.11"	"0.00009"	"10/86"	"10"	"86"	"1163123.98291016"	"HCD"	"MS2"	"15.7394"	"82.4"	"100.000"	"69.4196"	"22790"	"22790"	"22762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.5"	""	"112.2"	""	"123.9"	""	"144.6"	"1.3"	"142.9"	"158.1"	""	"201"	"60"	"30.000"	"23.000"	"1.12503507288449E-05"	""	"0"	"8.094E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLLGLDNAGK"	"[R].iLLLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"0"	"3"	"3"	"0.7736"	"0.0000"	"1"	"1"	"1"	"529.00812"	"1585.00980"	"1585.00890"	"0.57"	"0.00030"	"8/86"	"8"	"86"	"2516630.45465088"	"HCD"	"MS2"	"22.37576"	"74.9"	"100.000"	"69.5848"	"22806"	"22806"	"22778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.2"	""	"82.9"	""	"127.3"	""	"125.3"	""	"129.2"	"158.4"	""	"201"	"53"	"30.000"	"23.000"	"4.61494002901053E-05"	""	"0"	"0.0001541"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIKPSIK"	"[K].vLIkPSIk.[E]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.03876"	"1585.10172"	"1585.10196"	"-0.15"	"-0.00008"	"6/64"	"6"	"64"	"47740676.3811035"	"HCD"	"MS2"	"8.217719"	"1202.2"	"48.467"	"40.5108"	"10983"	"10983"	"10965"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1604.2"	""	"1670.4"	""	"1779.8"	""	"2066.7"	"11.9"	"2169.6"	"2082.8"	""	"18"	"8"	"19.000"	"13.000"	"0.127421440196137"	"13"	"0.000523"	"0.002823"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIKPSIK"	"[K].vLIkPSIk.[E]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.03888"	"1585.10208"	"1585.10196"	"0.08"	"0.00004"	"7/64"	"7"	"64"	"55360721.8377686"	"HCD"	"MS2"	"7.709345"	"1005.2"	"35.529"	"40.6990"	"11104"	"11104"	"11085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1366.6"	""	"1411.1"	""	"1457.5"	""	"1726.7"	"1.1"	"1835.6"	"1721.1"	""	"18"	"9"	"19.000"	"13.000"	"0.112782705744727"	"13"	"0.0008453"	"0.007923"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSFMSTLQK"	"[K].vSSFMSTLQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"529.30518"	"1585.90097"	"1585.90239"	"-0.89"	"-0.00047"	"7/84"	"7"	"84"	"5670639.46539307"	"HCD"	"MS2"	"0"	"155.7"	"100.000"	"54.2678"	"16615"	"16615"	"16589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"247.9"	""	"198.1"	""	"220.2"	""	"235.4"	"9.9"	"263.3"	"299.5"	""	"834"	"49"	"36.000"	"29.000"	"0.000589028156107688"	"20"	"0"	"0.0001703"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSFMSTLQK"	"[K].vSSFMSTLQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"529.30530"	"1585.90134"	"1585.90239"	"-0.66"	"-0.00035"	"11/84"	"11"	"84"	"3861980.43255615"	"HCD"	"MS2"	"31.36807"	"128.6"	"100.000"	"54.0156"	"16459"	"16459"	"16434"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.5"	""	"165.4"	""	"181.8"	""	"204.3"	"8.9"	"210.3"	"241.1"	""	"826"	"34"	"36.000"	"29.000"	"0.0149951236620052"	"19"	"0.0001889"	"0.0004364"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSFMSTLQK"	"[K].vSSFMSTLQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"793.45465"	"1585.90203"	"1585.90239"	"-0.23"	"-0.00018"	"15/84"	"15"	"84"	"1674134.0043335"	"HCD"	"MS2"	"0"	"150.3"	"100.000"	"54.2356"	"16602"	"16602"	"16577"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"247.5"	""	"181.0"	""	"226.1"	""	"210.5"	""	"247.0"	"311.3"	""	"826"	"54"	"36.000"	"29.000"	"0.000171376019607992"	"22"	"0"	"3.235E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSFMSTLQK"	"[K].vSSFMSTLQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"793.45496"	"1585.90264"	"1585.90239"	"0.16"	"0.00013"	"9/84"	"9"	"84"	"1281626.86968994"	"HCD"	"MS2"	"0"	"120.3"	"100.000"	"54.0110"	"16457"	"16457"	"16434"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.4"	""	"150.3"	""	"163.9"	""	"174.7"	""	"197.0"	"249.1"	""	"822"	"51"	"36.000"	"29.000"	"0.000325718046827474"	"22"	"0"	"1.704E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSIGLNTWPIIR"	"[K].sSIGLNTWPIIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q76EQ0"	"Serine racemase OS=Rattus norvegicus OX=10116 GN=Srr PE=1 SV=1"	"Q76EQ0"	"Serine racemase OS=Rattus norvegicus OX=10116 GN=Srr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.46674"	"1585.92620"	"1585.92634"	"-0.09"	"-0.00007"	"16/112"	"16"	"112"	"1456137.88519287"	"HCD"	"MS2"	"27.24957"	"89.3"	"100.000"	"62.9487"	"20157"	"20157"	"20131"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.6"	""	"111.0"	""	"117.8"	""	"142.3"	""	"177.4"	"194.0"	""	"778"	"9"	"35.000"	"28.000"	"5.28383930722403"	"13"	"0.0001889"	"0.0004948"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSIGLNTWPIIR"	"[K].sSIGLNTWPIIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q76EQ0"	"Serine racemase OS=Rattus norvegicus OX=10116 GN=Srr PE=1 SV=1"	"Q76EQ0"	"Serine racemase OS=Rattus norvegicus OX=10116 GN=Srr PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"793.46838"	"1585.92949"	"1585.92634"	"1.99"	"0.00157"	"10/112"	"10"	"112"	"1606479.19311523"	"HCD"	"MS2"	"48.11654"	"95.3"	"100.000"	"62.8143"	"20049"	"20049"	"20025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.3"	""	"134.0"	""	"124.2"	""	"155.1"	"1.0"	"179.0"	"196.2"	""	"768"	"32"	"35.000"	"28.000"	"0.0263834280965465"	"20"	"7.476E-05"	"0.000202"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGDQLSLLLGAR"	"[R].tLGDQLSLLLGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4TU93"	"C-type mannose receptor 2 OS=Rattus norvegicus OX=10116 GN=Mrc2 PE=1 SV=1"	"Q4TU93"	"C-type mannose receptor 2 OS=Rattus norvegicus OX=10116 GN=Mrc2 PE=1 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"793.47528"	"1585.94328"	"1585.94747"	"-2.64"	"-0.00209"	"11/124"	"11"	"124"	"776200.179138184"	"HCD"	"MS2"	"0"	"38.6"	"100.000"	"76.8060"	"25793"	"25793"	"25774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.8"	""	"46.7"	""	"48.9"	""	"66.7"	"0.1"	"70.8"	"80.0"	""	"664"	"44"	"35.000"	"28.000"	"0.00121377470815558"	"19"	"0"	"2.575E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDGLLNTLVAR"	"[R].tALDGLLNTLVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"0"	"3"	"3"	"0.7101"	"0.0000"	"1"	"1"	"1"	"529.31995"	"1585.94529"	"1585.94747"	"-1.38"	"-0.00073"	"17/122"	"17"	"122"	"2766777.22174072"	"HCD"	"MS2"	"26.74947"	"28.2"	"100.000"	"80.2142"	"27184"	"27184"	"27167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.8"	""	"46.2"	""	"45.3"	""	"48.4"	""	"44.1"	"54.4"	""	"646"	"69"	"35.000"	"28.000"	"4.13240161242879E-06"	""	"0"	"1.867E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDGLLNTLVAR"	"[R].tALDGLLNTLVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"529.32025"	"1585.94620"	"1585.94747"	"-0.80"	"-0.00042"	"17/122"	"17"	"122"	"2740281.33007813"	"HCD"	"MS2"	"21.10552"	"29.0"	"100.000"	"80.2265"	"27138"	"27138"	"27121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.3"	""	"45.7"	""	"44.3"	""	"46.8"	""	"48.1"	"61.9"	""	"645"	"74"	"35.000"	"28.000"	"1.24603350099938E-06"	""	"0"	"9.279E-06"	"1.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDGLLNTLVAR"	"[R].tALDGLLNTLVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"529.32043"	"1585.94675"	"1585.94747"	"-0.46"	"-0.00024"	"12/122"	"12"	"122"	"398843.235656738"	"HCD"	"MS2"	"26.83124"	"9.4"	"100.000"	"80.5585"	"27273"	"27273"	"27249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.4"	""	"11.1"	""	"15.8"	""	"18.4"	""	"14.6"	"19.5"	""	"645"	"45"	"35.000"	"28.000"	"0.00106544176984373"	"25"	"0"	"9.691E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDGLLNTLVAR"	"[R].tALDGLLNTLVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"529.32050"	"1585.94693"	"1585.94747"	"-0.34"	"-0.00018"	"12/122"	"12"	"122"	"320199.100646973"	"HCD"	"MS2"	"21.74304"	"9.1"	"100.000"	"80.5531"	"27322"	"27322"	"27295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"11.7"	""	"12.3"	""	"13.0"	""	"20.8"	"18.6"	""	"640"	"43"	"35.000"	"28.000"	"0.00157815617265579"	"24"	"0"	"8.375E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDGLLNTLVAR"	"[R].tALDGLLNTLVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"0"	"2"	"2"	"0.8551"	"0.0000"	"1"	"1"	"1"	"793.47723"	"1585.94719"	"1585.94747"	"-0.18"	"-0.00014"	"11/122"	"11"	"122"	"1319230.31445313"	"HCD"	"MS2"	"19.11875"	"67.5"	"100.000"	"80.1452"	"27155"	"27155"	"27135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.6"	""	"104.8"	""	"108.2"	""	"105.5"	"0.8"	"103.5"	"132.0"	""	"640"	"69"	"35.000"	"28.000"	"4.32663220222168E-06"	"27"	"0"	"2.158E-06"	"1.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDGLLNTLVAR"	"[R].tALDGLLNTLVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"793.47742"	"1585.94756"	"1585.94747"	"0.05"	"0.00004"	"9/122"	"9"	"122"	"318181.886108398"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"80.5446"	"27267"	"27267"	"27249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.8"	""	"32.0"	""	"35.6"	""	"32.4"	""	"33.0"	"41.9"	""	"649"	"58"	"35.000"	"28.000"	"5.15483419919979E-05"	"22"	"0"	"4.947E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDGLLNTLVAR"	"[R].tALDGLLNTLVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"793.47778"	"1585.94829"	"1585.94747"	"0.52"	"0.00041"	"8/122"	"8"	"122"	"255154.379638672"	"HCD"	"MS2"	"14.75901"	"19.2"	"100.000"	"80.5417"	"27317"	"27317"	"27295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.5"	""	"27.9"	""	"33.2"	""	"28.3"	"1.2"	"33.9"	"33.4"	""	"631"	"41"	"34.000"	"28.000"	"0.00229086429570791"	"18"	"0.0001308"	"0.0002444"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDGLLNTLVAR"	"[R].tALDGLLNTLVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"793.47784"	"1585.94841"	"1585.94747"	"0.59"	"0.00047"	"11/122"	"11"	"122"	"1154440.45581055"	"HCD"	"MS2"	"14.59573"	"60.7"	"100.000"	"80.1548"	"27108"	"27108"	"27089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.7"	""	"86.9"	""	"99.3"	""	"99.5"	"1.9"	"92.2"	"113.9"	""	"631"	"71"	"34.000"	"28.000"	"2.81189670981197E-06"	""	"0"	"7.535E-07"	"1.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGFPLERPK"	"[R].aLGFPLERPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"529.33185"	"1585.98099"	"1585.98302"	"-1.28"	"-0.00068"	"11/76"	"11"	"76"	"29752122.6193848"	"HCD"	"MS2"	"6.423544"	"780.5"	"63.260"	"41.6551"	"11496"	"11496"	"11474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1335.7"	""	"1216.7"	""	"1198.1"	""	"1156.0"	"5.1"	"1210.6"	"1251.0"	""	"419"	"24"	"33.000"	"26.000"	"0.0760648524743363"	"15"	"0"	"2.766E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGFPLERPK"	"[R].aLGFPLERPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.33191"	"1585.98117"	"1585.98302"	"-1.16"	"-0.00061"	"9/76"	"9"	"76"	"21345153.9661865"	"HCD"	"MS2"	"3.632773"	"557.3"	"58.062"	"41.3982"	"11347"	"11347"	"11328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"912.1"	""	"860.9"	""	"878.8"	""	"863.4"	"2.3"	"831.0"	"915.5"	""	"419"	"27"	"33.000"	"26.000"	"0.0376863456719481"	"14"	"0"	"1.373E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTGGIAHLFK"	"[K].aLTGGIAHLFk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"529.33221"	"1585.98209"	"1585.98302"	"-0.59"	"-0.00031"	"10/80"	"10"	"80"	"7565184.49053955"	"HCD"	"MS2"	"19.12035"	"252.8"	"100.000"	"51.8497"	"15644"	"15644"	"15622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.3"	""	"338.3"	""	"339.2"	""	"438.8"	""	"481.5"	"456.2"	""	"412"	"25"	"33.000"	"26.000"	"0.0715924492573004"	"18"	"0"	"0.0001753"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTGGIAHLFK"	"[K].aLTGGIAHLFk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"529.33234"	"1585.98246"	"1585.98302"	"-0.35"	"-0.00019"	"17/80"	"17"	"80"	"7340397.53955078"	"HCD"	"MS2"	"38.74711"	"239.8"	"100.000"	"51.6289"	"15504"	"15504"	"15474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"362.3"	""	"313.0"	""	"327.4"	""	"394.5"	"1.9"	"422.4"	"449.2"	""	"412"	"39"	"33.000"	"26.000"	"0.00239809962058561"	"19"	"0"	"1.128E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGFPLERPK"	"[R].aLGFPLERPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"793.49536"	"1585.98345"	"1585.98302"	"0.27"	"0.00021"	"7/76"	"7"	"76"	"686768.111572266"	"HCD"	"MS2"	"0"	"47.9"	"100.000"	"41.5311"	"11402"	"11402"	"11371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.0"	""	"68.3"	""	"74.3"	""	"71.0"	"0.9"	"77.2"	"87.3"	""	"395"	"34"	"32.000"	"25.000"	"0.00708870820923884"	"21"	"0.0001889"	"0.0006453"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGFPLERPK"	"[R].aLGFPLERPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"793.49573"	"1585.98418"	"1585.98302"	"0.73"	"0.00058"	"14/76"	"14"	"76"	"567727.135498047"	"HCD"	"MS2"	"0"	"43.3"	"100.000"	"41.8293"	"11568"	"11568"	"11538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.9"	""	"55.6"	""	"64.7"	""	"72.9"	"1.4"	"67.8"	"71.9"	""	"426"	"35"	"33.000"	"26.000"	"0.00653701683527316"	"22"	"0.0001889"	"0.0005668"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPINTTLLK"	"[R].lDPINTTLLk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AYR2"	"Protein NDRG3 OS=Rattus norvegicus OX=10116 GN=Ndrg3 PE=1 SV=1"	"Q6AYR2"	"Protein NDRG3 OS=Rattus norvegicus OX=10116 GN=Ndrg3 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"793.50006"	"1585.99285"	"1585.99291"	"-0.04"	"-0.00003"	"9/92"	"9"	"92"	"1609469.35852051"	"HCD"	"MS2"	"41.32806"	"144.3"	"100.000"	"59.2242"	"18583"	"18583"	"18553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.6"	""	"200.3"	""	"211.0"	""	"237.8"	"1.1"	"254.5"	"293.7"	""	"349"	"34"	"32.000"	"25.000"	"0.00635031738041977"	"16"	"0"	"0.0001292"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPINTTLLK"	"[R].lDPINTTLLk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AYR2"	"Protein NDRG3 OS=Rattus norvegicus OX=10116 GN=Ndrg3 PE=1 SV=1"	"Q6AYR2"	"Protein NDRG3 OS=Rattus norvegicus OX=10116 GN=Ndrg3 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"793.50055"	"1585.99382"	"1585.99291"	"0.57"	"0.00045"	"16/92"	"16"	"92"	"1665736.45819092"	"HCD"	"MS2"	"35.15501"	"143.0"	"100.000"	"59.3598"	"18692"	"18692"	"18661"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.6"	""	"194.3"	""	"191.5"	""	"250.1"	""	"268.9"	"271.1"	""	"340"	"38"	"32.000"	"25.000"	"0.00257898562468088"	"19"	"0"	"0.0001121"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVMGDFAQFVDk.[C]"	"K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9649"	"0.0000"	"1"	"1"	"1"	"793.90796"	"1586.80864"	"1586.80860"	"0.03"	"0.00002"	"8/116"	"8"	"116"	"623153.386169434"	"HCD"	"MS2"	"37.0714"	"51.1"	"100.000"	"63.6852"	"20405"	"20405"	"20377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.8"	""	"76.5"	""	"67.5"	""	"68.2"	"0.2"	"106.5"	"90.4"	""	"740"	"57"	"35.000"	"28.000"	"7.23105598636895E-05"	"18"	"0.0001889"	"0.0007556"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYFENALPK"	"[R].fYFENALPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"3"	"3"	"0.1818"	"0.0000"	"1"	"1"	"1"	"529.63678"	"1586.89579"	"1586.89829"	"-1.58"	"-0.00083"	"6/72"	"6"	"72"	"2939846.07434082"	"HCD"	"MS2"	"10.36577"	"110.3"	"100.000"	"61.5744"	"19596"	"19596"	"19571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.7"	""	"142.9"	""	"106.8"	""	"196.4"	""	"236.9"	"227.1"	""	"924"	"11"	"36.000"	"29.000"	"3.78130732118273"	"23"	"0.0006037"	"0.005925"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYFENALPK"	"[R].fYFENALPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"793.95221"	"1586.89714"	"1586.89829"	"-0.72"	"-0.00057"	"6/72"	"6"	"72"	"3350788.93328857"	"HCD"	"MS2"	"0"	"241.1"	"100.000"	"61.2908"	"19480"	"19480"	"19459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"313.0"	""	"266.0"	""	"321.3"	""	"426.2"	"4.5"	"471.4"	"484.8"	""	"906"	"37"	"36.000"	"29.000"	"0.0089763174268971"	"18"	"0.0001308"	"0.0002175"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYFENALPK"	"[R].fYFENALPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"529.63739"	"1586.89762"	"1586.89829"	"-0.42"	"-0.00022"	"7/72"	"7"	"72"	"9401793.97662354"	"HCD"	"MS2"	"2.739597"	"242.2"	"100.000"	"61.2516"	"19464"	"19464"	"19443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"318.0"	""	"298.4"	""	"330.5"	""	"423.4"	""	"457.8"	"468.4"	""	"907"	"31"	"36.000"	"29.000"	"0.0345602831046524"	"25"	"0"	"0.0001825"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYFENALPK"	"[R].fYFENALPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.63757"	"1586.89817"	"1586.89829"	"-0.08"	"-0.00004"	"6/72"	"6"	"72"	"2523939.45703125"	"HCD"	"MS2"	"6.317782"	"105.5"	"100.000"	"61.4156"	"19478"	"19478"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.1"	""	"118.3"	""	"121.8"	""	"170.4"	""	"248.1"	"222.7"	""	"904"	"7"	"36.000"	"29.000"	"8.71241260762303"	"13"	"0.0009404"	"0.00986"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYFENALPK"	"[R].fYFENALPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"793.95294"	"1586.89861"	"1586.89829"	"0.20"	"0.00016"	"6/72"	"6"	"72"	"3648600.39367676"	"HCD"	"MS2"	"0"	"269.2"	"100.000"	"61.1178"	"19356"	"19356"	"19337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"364.5"	""	"319.7"	""	"365.7"	""	"471.9"	""	"494.3"	"536.7"	""	"900"	"37"	"36.000"	"29.000"	"0.00875412036730198"	"18"	"0.0001308"	"0.0002883"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYFENALPK"	"[R].fYFENALPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"529.63800"	"1586.89945"	"1586.89829"	"0.73"	"0.00039"	"6/72"	"6"	"72"	"8945536.67724609"	"HCD"	"MS2"	"6.342549"	"251.2"	"100.000"	"61.0787"	"19340"	"19340"	"19321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.9"	""	"323.3"	""	"336.0"	""	"437.9"	""	"476.9"	"488.0"	""	"907"	"22"	"36.000"	"29.000"	"0.282213179324214"	"23"	"0.0001308"	"0.000216"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVYVADVTAK"	"[K].yVYVADVTAk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.9508"	"0.0000"	"1"	"1"	"1"	"793.96320"	"1586.91911"	"1586.91942"	"-0.19"	"-0.00015"	"9/76"	"9"	"76"	"1642459.83764648"	"HCD"	"MS2"	"0"	"127.0"	"100.000"	"46.9458"	"13646"	"13646"	"13618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.0"	""	"221.8"	""	"211.2"	""	"201.1"	"2.2"	"224.4"	"224.5"	""	"843"	"61"	"36.000"	"29.000"	"3.43397855714784E-05"	"19"	"0"	"1.274E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVYVADVTAK"	"[K].yVYVADVTAk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"793.96442"	"1586.92156"	"1586.91942"	"1.35"	"0.00107"	"8/76"	"8"	"76"	"1495111.48529053"	"HCD"	"MS2"	"0"	"120.3"	"100.000"	"46.6864"	"13492"	"13492"	"13464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.0"	""	"213.8"	""	"204.6"	""	"188.9"	""	"213.2"	"215.8"	""	"857"	"53"	"36.000"	"29.000"	"0.000225917995619679"	"17"	"0"	"5.568E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVYVADVTAK"	"[K].yVYVADVTAk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"529.64551"	"1586.92197"	"1586.91942"	"1.61"	"0.00085"	"5/76"	"5"	"76"	"3654208.52703857"	"HCD"	"MS2"	"57.50048"	"146.3"	"100.000"	"46.7601"	"13522"	"13522"	"13496"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.9"	""	"191.2"	""	"211.2"	""	"251.1"	""	"286.8"	"273.4"	""	"831"	"25"	"36.000"	"29.000"	"0.127517863617653"	"21"	"0.0003571"	"0.001502"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVMETVPVLK"	"[K].iVMETVPVLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6TMG5"	"NF-kappa-B essential modulator OS=Rattus norvegicus OX=10116 GN=Ikbkg PE=2 SV=1"	"Q6TMG5"	"NF-kappa-B essential modulator OS=Rattus norvegicus OX=10116 GN=Ikbkg PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.00146"	"1586.99565"	"1586.99556"	"0.06"	"0.00005"	"6/74"	"6"	"74"	"887201.39440918"	"HCD"	"MS2"	"57.51629"	"78.4"	"100.000"	"61.8604"	"19713"	"19713"	"19683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.4"	""	"98.7"	""	"99.9"	""	"111.6"	"4.3"	"129.3"	"205.7"	""	"440"	"18"	"33.000"	"26.000"	"0.34389248138101"	"14"	"0.0008125"	"0.007814"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTISLLVAGLK"	"[R].nTISLLVAGLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"794.01501"	"1587.02275"	"1587.02455"	"-1.13"	"-0.00090"	"10/104"	"10"	"104"	"1384708.67095947"	"HCD"	"MS2"	"51.71708"	"90.1"	"100.000"	"71.1352"	"23490"	"23490"	"23466"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.0"	""	"107.7"	""	"135.0"	""	"160.2"	"0.1"	"171.3"	"176.2"	""	"269"	"64"	"31.000"	"24.000"	"5.00866844912394E-06"	""	"0"	"1.483E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTISLLVAGLK"	"[R].nTISLLVAGLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"529.67914"	"1587.02286"	"1587.02455"	"-1.06"	"-0.00056"	"8/104"	"8"	"104"	"2710335.47393799"	"HCD"	"MS2"	"9.920079"	"66.5"	"100.000"	"71.1691"	"23452"	"23452"	"23427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.3"	""	"80.7"	""	"94.9"	""	"129.3"	""	"129.3"	"124.9"	""	"269"	"56"	"31.000"	"24.000"	"3.2864140933734E-05"	""	"0"	"1.9E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTISLLVAGLK"	"[R].nTISLLVAGLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"794.01575"	"1587.02422"	"1587.02455"	"-0.21"	"-0.00017"	"10/104"	"10"	"104"	"1358659.13800049"	"HCD"	"MS2"	"31.80833"	"90.7"	"100.000"	"71.2428"	"23482"	"23482"	"23459"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.1"	""	"104.3"	""	"144.3"	""	"149.3"	"2.4"	"164.9"	"174.4"	""	"269"	"75"	"31.000"	"24.000"	"3.92393933383158E-07"	"23"	"0"	"5.058E-06"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTISLLVAGLK"	"[R].nTISLLVAGLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8136"	"0.0000"	"1"	"1"	"1"	"529.68011"	"1587.02579"	"1587.02455"	"0.78"	"0.00041"	"8/104"	"8"	"104"	"2907989.51733398"	"HCD"	"MS2"	"18.61169"	"75.5"	"100.000"	"71.0871"	"23470"	"23470"	"23450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.6"	""	"90.2"	""	"116.0"	""	"136.9"	""	"141.4"	"144.6"	""	"279"	"59"	"31.000"	"24.000"	"1.91238006379997E-05"	""	"0"	"1.251E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFGNLMDASK"	"[K].fFGNLMDASk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"794.43359"	"1587.85991"	"1587.86052"	"-0.38"	"-0.00030"	"12/88"	"12"	"88"	"3340282.62988281"	"HCD"	"MS2"	"36.56858"	"295.3"	"100.000"	"62.3322"	"19852"	"19852"	"19833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"492.9"	""	"385.9"	""	"411.3"	""	"387.0"	""	"458.5"	"668.9"	""	"1061"	"24"	"37.000"	"30.000"	"0.214627510545494"	"15"	"0"	"0.0001564"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFGNLMDASK"	"[K].fFGNLMDASk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.43433"	"1587.86138"	"1587.86052"	"0.54"	"0.00043"	"9/88"	"9"	"88"	"3947925.37261963"	"HCD"	"MS2"	"41.24802"	"308.2"	"100.000"	"62.4598"	"19957"	"19957"	"19939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"545.4"	""	"392.3"	""	"431.1"	""	"411.9"	"3.2"	"457.9"	"674.2"	""	"1069"	"34"	"37.000"	"30.000"	"0.0233855565207086"	"15"	"0"	"6.908E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAYEFVEMK"	"[R].iAYEFVEMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.44641"	"1587.88555"	"1587.88567"	"-0.08"	"-0.00006"	"7/70"	"7"	"70"	"838992.439331055"	"HCD"	"MS2"	"0"	"85.2"	"100.000"	"61.8099"	"19639"	"19639"	"19609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.3"	""	"102.0"	""	"106.4"	""	"80.8"	""	"107.6"	"318.6"	""	"1052"	"30"	"37.000"	"30.000"	"0.0518783009442017"	"15"	"0.0001308"	"0.0002208"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAYEFVEMK"	"[R].iAYEFVEMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"794.44641"	"1587.88555"	"1587.88567"	"-0.08"	"-0.00006"	"7/70"	"7"	"70"	"1126032.42828369"	"HCD"	"MS2"	"31.24054"	"106.1"	"100.000"	"61.9411"	"19746"	"19746"	"19715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.2"	""	"118.7"	""	"123.3"	""	"103.8"	"2.1"	"150.0"	"380.8"	""	"1052"	"48"	"37.000"	"30.000"	"0.000841367523051317"	"25"	"0"	"7.939E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIWDVGGQK"	"[K].lNIWDVGGQk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"794.46625"	"1587.92522"	"1587.92590"	"-0.43"	"-0.00034"	"14/88"	"14"	"88"	"932933.744018555"	"HCD"	"MS2"	"0"	"84.9"	"100.000"	"58.0945"	"18180"	"18180"	"18149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.2"	""	"111.0"	"2.0"	"123.2"	""	"131.9"	"0.9"	"156.8"	"148.2"	""	"799"	"43"	"36.000"	"29.000"	"0.00210628329638418"	"26"	"0"	"2.368E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIWDVGGQK"	"[K].lNIWDVGGQk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"529.97998"	"1587.92539"	"1587.92590"	"-0.32"	"-0.00017"	"6/88"	"6"	"88"	"3978142.36065674"	"HCD"	"MS2"	"78.16653"	"170.4"	"100.000"	"58.0899"	"18178"	"18178"	"18149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.2"	""	"233.4"	""	"230.9"	""	"236.8"	""	"310.6"	"371.6"	""	"799"	"5"	"36.000"	"29.000"	"11.5748876328668"	"16"	"0.0006037"	"0.004036"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVGVILDEAK"	"[K].wVGVILDEAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"794.47864"	"1587.95000"	"1587.95105"	"-0.66"	"-0.00053"	"9/74"	"9"	"74"	"1424932.16455078"	"HCD"	"MS2"	"0"	"89.9"	"100.000"	"68.3880"	"22317"	"22317"	"22298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.2"	""	"117.8"	""	"122.7"	""	"153.8"	"0.9"	"172.2"	"179.1"	""	"707"	"26"	"35.000"	"28.000"	"0.0795040803162949"	"17"	"0"	"8.332E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVGVILDEAK"	"[K].wVGVILDEAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"794.47943"	"1587.95159"	"1587.95105"	"0.34"	"0.00027"	"13/74"	"13"	"74"	"1010984.74761963"	"HCD"	"MS2"	"0"	"70.0"	"100.000"	"68.3177"	"22340"	"22340"	"22314"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.2"	""	"82.0"	""	"92.3"	""	"132.8"	"1.7"	"123.5"	"135.8"	""	"706"	"40"	"35.000"	"28.000"	"0.00393345970357881"	"18"	"0"	"0.0001781"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLWWLDLK"	"[R].rLWWLDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"0.1500"	"0.0000"	"1"	"1"	"1"	"529.99670"	"1587.97556"	"1587.97754"	"-1.25"	"-0.00066"	"5/70"	"5"	"70"	"12646418.2922974"	"HCD"	"MS2"	"2.726066"	"256.2"	"57.363"	"64.4185"	"20757"	"20757"	"20739"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"467.3"	""	"469.8"	""	"344.3"	""	"420.4"	"2.6"	"352.2"	"360.2"	""	"627"	"20"	"34.000"	"27.000"	"0.350136628179206"	""	"0.0001889"	"0.001104"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLWWLDLK"	"[R].rLWWLDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"529.99695"	"1587.97629"	"1587.97754"	"-0.79"	"-0.00042"	"7/70"	"7"	"70"	"9637099.14953613"	"HCD"	"MS2"	"26.09353"	"322.4"	"100.000"	"64.1190"	"20635"	"20635"	"20611"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"577.8"	""	"613.6"	""	"450.6"	""	"543.2"	"1.7"	"442.2"	"411.3"	""	"627"	"20"	"34.000"	"27.000"	"0.284601736210861"	""	"0.0001889"	"0.0006656"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLWWLDLK"	"[R].rLWWLDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"794.49207"	"1587.97685"	"1587.97754"	"-0.43"	"-0.00034"	"7/70"	"7"	"70"	"929503.657104492"	"HCD"	"MS2"	"38.38844"	"82.4"	"100.000"	"64.3150"	"20715"	"20715"	"20691"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.7"	""	"107.2"	""	"108.8"	""	"165.1"	""	"141.1"	"150.9"	""	"671"	"15"	"35.000"	"28.000"	"1.03440955730866"	"19"	"0.002953"	"0.05139"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLWWLDLK"	"[R].rLWWLDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"529.99731"	"1587.97739"	"1587.97754"	"-0.09"	"-0.00005"	"7/70"	"7"	"70"	"8688513.49517822"	"HCD"	"MS2"	"16.72009"	"299.5"	"100.000"	"64.1069"	"20577"	"20577"	"20553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"552.7"	""	"578.3"	""	"400.1"	""	"510.3"	""	"402.6"	"382.5"	""	"662"	"21"	"35.000"	"28.000"	"0.27850179188456"	""	"0.0001889"	"0.0005442"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLWWLDLK"	"[R].rLWWLDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"0.2105"	"0.0000"	"1"	"1"	"1"	"529.99750"	"1587.97794"	"1587.97754"	"0.25"	"0.00013"	"4/70"	"4"	"70"	"13940250.2474365"	"HCD"	"MS2"	"4.137549"	"261.0"	"52.478"	"64.4063"	"20699"	"20699"	"20681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"467.4"	""	"488.9"	""	"369.9"	""	"421.6"	""	"352.9"	"363.5"	""	"657"	"19"	"35.000"	"28.000"	"0.379782871560104"	"28"	"0.0001889"	"0.0008579"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFPLEVVQK"	"[K].vAFPLEVVQk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63621"	"Interleukin-1 receptor accessory protein OS=Rattus norvegicus OX=10116 GN=Il1rap PE=2 SV=1"	"Q63621"	"Interleukin-1 receptor accessory protein OS=Rattus norvegicus OX=10116 GN=Il1rap PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.00037"	"1587.98655"	"1587.98744"	"-0.56"	"-0.00030"	"6/74"	"6"	"74"	"3566678.21563721"	"HCD"	"MS2"	"51.41193"	"125.6"	"100.000"	"62.4461"	"19952"	"19952"	"19923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"200.4"	""	"174.7"	""	"160.1"	""	"179.5"	"3.8"	"211.4"	"259.9"	""	"571"	"16"	"34.000"	"27.000"	"0.747491248846521"	"13"	"0.0001859"	"0.0003263"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFPLEVVQK"	"[K].vAFPLEVVQk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63621"	"Interleukin-1 receptor accessory protein OS=Rattus norvegicus OX=10116 GN=Il1rap PE=2 SV=1"	"Q63621"	"Interleukin-1 receptor accessory protein OS=Rattus norvegicus OX=10116 GN=Il1rap PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.00055"	"1587.98709"	"1587.98744"	"-0.21"	"-0.00011"	"11/74"	"11"	"74"	"3194647.32159424"	"HCD"	"MS2"	"40.65747"	"113.8"	"100.000"	"62.2816"	"19832"	"19832"	"19801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.1"	""	"168.9"	""	"154.0"	""	"159.5"	"1.6"	"191.5"	"226.0"	""	"571"	"20"	"34.000"	"27.000"	"0.261580949929831"	"14"	"0"	"0.0001357"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSEGGKPK"	"[R].vVSEGGkPk.[V]"	"N-Term(TMT6plex); K7(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.00537"	"1588.00156"	"1588.00370"	"-1.35"	"-0.00071"	"6/70"	"6"	"70"	"3100130.76904297"	"HCD"	"MS2"	"0"	"210.5"	"100.000"	"27.9953"	"5949"	"5949"	"5921"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.3"	""	"303.0"	""	"299.8"	""	"309.9"	""	"373.5"	"385.5"	""	"456"	"5"	"33.000"	"26.000"	"7.4805726829791"	"13"	"0"	"0.0001026"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMTMFVTASK"	"[R].dMTMFVTASk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"0"	"2"	"2"	"0.9683"	"0.0000"	"1"	"1"	"1"	"794.92694"	"1588.84661"	"1588.84791"	"-0.82"	"-0.00065"	"9/88"	"9"	"88"	"898593.987182617"	"HCD"	"MS2"	"0"	"88.4"	"100.000"	"52.6484"	"15971"	"15971"	"15942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.4"	""	"129.3"	""	"132.5"	""	"114.4"	""	"164.7"	"176.6"	""	"1014"	"63"	"37.000"	"30.000"	"2.36596305819344E-05"	"19"	"0"	"2.489E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMTMFVTASK"	"[R].dMTMFVTASk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"0"	"2"	"2"	"0.9839"	"0.0000"	"1"	"1"	"1"	"794.92773"	"1588.84819"	"1588.84791"	"0.18"	"0.00014"	"9/88"	"9"	"88"	"1077249.84875488"	"HCD"	"MS2"	"0"	"104.5"	"100.000"	"52.4041"	"15821"	"15821"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.2"	""	"173.2"	""	"144.1"	""	"124.7"	""	"186.5"	"217.1"	""	"1021"	"62"	"37.000"	"30.000"	"3.27337488846725E-05"	"17"	"0"	"1.323E-05"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAETLYSFK"	"[K].dGAETLYSFk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"794.93384"	"1588.86040"	"1588.86229"	"-1.19"	"-0.00095"	"9/86"	"9"	"86"	"1818300.44506836"	"HCD"	"MS2"	"0"	"170.6"	"100.000"	"47.9631"	"14014"	"14014"	"13992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"347.8"	""	"228.7"	""	"104.5"	""	"317.4"	""	"355.6"	"263.1"	""	"1056"	"50"	"37.000"	"30.000"	"0.000514794528714781"	"28"	"0"	"2.139E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAETLYSFK"	"[K].dGAETLYSFk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"794.93469"	"1588.86211"	"1588.86229"	"-0.12"	"-0.00009"	"16/86"	"16"	"86"	"1900180.8326416"	"HCD"	"MS2"	"0"	"190.9"	"100.000"	"48.2243"	"14169"	"14169"	"14146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"398.7"	""	"251.1"	""	"118.3"	""	"351.9"	"0.4"	"397.2"	"290.7"	""	"1051"	"56"	"37.000"	"30.000"	"0.000134453688356892"	""	"0"	"3.033E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQVEYAMK"	"[R].vFQVEYAmk.[A]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"794.94250"	"1588.87773"	"1588.88092"	"-2.01"	"-0.00159"	"13/76"	"13"	"76"	"374517.519104004"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"45.8029"	"13130"	"13130"	"13103"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.7"	""	"55.2"	""	"61.0"	""	"75.2"	"0.4"	"83.7"	"74.2"	""	"1006"	"38"	"37.000"	"30.000"	"0.00730412143646634"	"16"	"0.000494"	"0.002639"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQVEYAMK"	"[R].vFQVEYAmk.[A]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.94318"	"1588.87908"	"1588.88092"	"-1.16"	"-0.00092"	"12/76"	"12"	"76"	"646537.501586914"	"HCD"	"MS2"	"100"	"55.4"	"100.000"	"45.9708"	"13248"	"13248"	"13227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.4"	""	"63.0"	""	"71.5"	""	"113.4"	""	"113.3"	"94.7"	""	"1060"	"32"	"37.000"	"30.000"	"0.0318622080866137"	"15"	"0.0006037"	"0.004425"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIYFADMVSK"	"[K].gIYFADMVSk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"3"	"794.94458"	"1588.88188"	"1588.88092"	"0.61"	"0.00048"	"7/78"	"7"	"78"	"1005748.88421631"	"HCD"	"MS2"	"59.21854"	"95.2"	"100.000"	"58.7369"	"18389"	"18389"	"18361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.9"	""	"126.0"	""	"126.8"	""	"155.4"	""	"167.7"	"192.4"	""	"980"	"10"	"36.000"	"29.000"	"5.48524562898905"	"17"	"0.0001889"	"0.0008818"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIYFADMVSK"	"[K].gIYFADMVSk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"3"	"794.94458"	"1588.88188"	"1588.88092"	"0.61"	"0.00048"	"16/78"	"16"	"78"	"1068115.70806885"	"HCD"	"MS2"	"49.19753"	"95.9"	"100.000"	"58.8826"	"18498"	"18498"	"18469"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.9"	""	"118.9"	""	"130.8"	""	"160.1"	"0.4"	"173.0"	"192.7"	""	"980"	"9"	"36.000"	"29.000"	"5.70421754411141"	"20"	"0.0003839"	"0.001796"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLLLADQMISR"	"[K].tVLLLADQMISR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q06486"	"Casein kinase I isoform delta OS=Rattus norvegicus OX=10116 GN=Csnk1d PE=1 SV=2"	"Q06486"	"Casein kinase I isoform delta OS=Rattus norvegicus OX=10116 GN=Csnk1d PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"794.96075"	"1588.91423"	"1588.92938"	"-9.53"	"-0.00757"	"8/116"	"8"	"116"	"622274.576477051"	"HCD"	"MS2"	"0"	"49.3"	"100.000"	"71.8480"	"23730"	"23730"	"23699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.3"	""	"60.9"	""	"68.6"	""	"76.7"	""	"92.3"	"95.5"	""	"921"	"11"	"36.000"	"29.000"	"3.6076935049384"	"19"	"0.0004166"	"0.002507"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGLQMVYK"	"[R].yLGLQmVYk.[A]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.96179"	"1588.91631"	"1588.91731"	"-0.63"	"-0.00050"	"8/74"	"8"	"74"	"1383238.6640625"	"HCD"	"MS2"	"13.91016"	"110.1"	"100.000"	"49.6385"	"14743"	"14743"	"14718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.9"	""	"81.8"	""	"83.7"	""	"336.7"	"1.7"	"256.0"	"219.0"	""	"938"	"44"	"36.000"	"29.000"	"0.00200989256066399"	"15"	"0.000523"	"0.002906"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIAEAIPELK"	"[K].mIAEAIPELk.[A]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"530.31793"	"1588.93924"	"1588.93844"	"0.51"	"0.00027"	"10/80"	"10"	"80"	"2755301.67852783"	"HCD"	"MS2"	"46.03935"	"118.6"	"100.000"	"51.4609"	"15435"	"15435"	"15410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.2"	""	"143.8"	""	"136.6"	""	"234.9"	"1.5"	"232.9"	"232.1"	""	"850"	"20"	"36.000"	"29.000"	"0.404938369710052"	"22"	"0.0006037"	"0.003891"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINWNLLEK"	"[K].tINWNLLEk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"794.97650"	"1588.94573"	"1588.94630"	"-0.36"	"-0.00029"	"16/90"	"16"	"90"	"1244751.30627441"	"HCD"	"MS2"	"14.57788"	"116.9"	"100.000"	"63.9323"	"20559"	"20559"	"20531"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.9"	""	"156.8"	""	"173.0"	""	"185.7"	""	"194.7"	"212.2"	""	"787"	"52"	"35.000"	"28.000"	"0.000252315968386261"	""	"0"	"4.825E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINWNLLEK"	"[K].tINWNLLEk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"794.97772"	"1588.94817"	"1588.94630"	"1.18"	"0.00093"	"8/90"	"8"	"90"	"1334635.46600342"	"HCD"	"MS2"	"0"	"118.8"	"100.000"	"63.9270"	"20504"	"20504"	"20473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.6"	""	"152.4"	""	"187.4"	""	"196.1"	""	"192.4"	"220.0"	""	"820"	"47"	"36.000"	"29.000"	"0.000837112557314508"	""	"0"	"6.649E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFVVGGPGSGK"	"[K].iIFVVGGPGSGk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.99365"	"1588.98003"	"1588.98268"	"-1.67"	"-0.00133"	"10/88"	"10"	"88"	"1263517.99401855"	"HCD"	"MS2"	"17.86677"	"110.8"	"100.000"	"58.5713"	"18321"	"18321"	"18297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.9"	""	"179.2"	""	"175.5"	""	"160.8"	""	"161.1"	"194.0"	""	"493"	"45"	"33.000"	"26.000"	"0.000837176296935358"	"15"	"0"	"3.768E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFVVGGPGSGK"	"[K].iIFVVGGPGSGk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.99377"	"1588.98027"	"1588.98268"	"-1.52"	"-0.00121"	"9/88"	"9"	"88"	"1343844.21276855"	"HCD"	"MS2"	"51.22425"	"116.7"	"100.000"	"58.7923"	"18461"	"18461"	"18437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.9"	""	"174.2"	""	"171.5"	""	"167.6"	""	"199.0"	"227.5"	""	"480"	"37"	"33.000"	"26.000"	"0.00526273184484107"	"15"	"0"	"3.847E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.5849"	"0.0000"	"1"	"1"	"1"	"795.40155"	"1589.79582"	"1589.79554"	"0.18"	"0.00014"	"16/74"	"16"	"74"	"1307841.37384033"	"HCD"	"MS2"	"23.25727"	"133.9"	"100.000"	"46.7624"	"13523"	"13523"	"13496"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.2"	""	"150.6"	""	"202.6"	""	"223.5"	""	"262.8"	"274.5"	""	"733"	"53"	"35.000"	"28.000"	"0.000164465185410493"	""	"0"	"6.827E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"795.40155"	"1589.79582"	"1589.79554"	"0.18"	"0.00014"	"14/74"	"14"	"74"	"1441881.2666626"	"HCD"	"MS2"	"0"	"127.7"	"100.000"	"47.1045"	"13711"	"13711"	"13682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.0"	""	"145.3"	""	"165.2"	""	"234.2"	"0.2"	"245.3"	"277.9"	""	"733"	"40"	"35.000"	"28.000"	"0.0038113074077635"	""	"0"	"0.0001107"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLFDYLADK"	"[R].mLFDYLADk.[H]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"795.43549"	"1589.86370"	"1589.86494"	"-0.78"	"-0.00062"	"16/72"	"16"	"72"	"1323361.37506104"	"HCD"	"MS2"	"11.53288"	"110.0"	"100.000"	"65.1113"	"20987"	"20987"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.8"	""	"123.7"	""	"153.4"	""	"253.6"	""	"193.1"	"187.8"	""	"1078"	"50"	"37.000"	"30.000"	"0.000555378118918031"	"23"	"0.0001889"	"0.0004007"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLFDYLADK"	"[R].mLFDYLADk.[H]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"795.43561"	"1589.86394"	"1589.86494"	"-0.63"	"-0.00050"	"16/72"	"16"	"72"	"1757881.96270752"	"HCD"	"MS2"	"8.319769"	"137.3"	"100.000"	"65.0525"	"21016"	"21016"	"20995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.4"	""	"169.0"	""	"193.2"	""	"336.3"	"1.7"	"233.9"	"214.3"	""	"1090"	"52"	"37.000"	"30.000"	"0.000362573870129948"	"24"	"0.0001889"	"0.000419"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLFDYLADK"	"[R].mLFDYLADk.[H]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"530.62628"	"1589.86429"	"1589.86494"	"-0.41"	"-0.00022"	"7/72"	"7"	"72"	"1841976.60821533"	"HCD"	"MS2"	"15.60233"	"58.9"	"100.000"	"65.0731"	"21025"	"21025"	"20995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.1"	""	"77.7"	""	"85.1"	""	"118.8"	""	"101.6"	"107.1"	""	"1083"	"17"	"37.000"	"30.000"	"1.09546488525428"	"15"	"0.001217"	"0.01699"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLFDYLADK"	"[R].mLFDYLADk.[H]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"530.62683"	"1589.86594"	"1589.86494"	"0.63"	"0.00033"	"6/72"	"6"	"72"	"1503159.33435059"	"HCD"	"MS2"	"21.20704"	"49.8"	"100.000"	"65.0952"	"20981"	"20981"	"20953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.1"	""	"67.5"	""	"67.5"	""	"105.5"	""	"88.8"	"86.6"	""	"1055"	"25"	"37.000"	"30.000"	"0.155676286706652"	"19"	"0.0006037"	"0.003744"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEMLPSVSSILT"	"[R].lAEMLPSVSSILT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"795.45416"	"1589.90105"	"1589.90216"	"-0.70"	"-0.00056"	"4/118"	"4"	"118"	"79822.5952758789"	"HCD"	"MS2"	"16.31002"	"1.2"	"100.000"	"96.1754"	"33077"	"33077"	"33073"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.2"	""	""	""	""	""	"2.8"	""	"3.5"	"3.1"	""	"1112"	"13"	"37.000"	"30.000"	"2.9045228108351"	"17"	"0.006502"	"0.2364"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEMLPSVSSILT"	"[R].lAEMLPSVSSILT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"795.45416"	"1589.90105"	"1589.90216"	"-0.70"	"-0.00056"	"4/118"	"4"	"118"	"114205.653991699"	"HCD"	"MS2"	"22.36821"	"2.1"	"100.000"	"95.9889"	"33016"	"33016"	"33007"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	"1.7"	""	"2.9"	""	"3.8"	""	"3.9"	"3.9"	""	"1112"	"15"	"37.000"	"30.000"	"1.95918204299623"	"17"	"0.004506"	"0.1307"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEIQEIQLK"	"[K].mEIQEIQLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"795.47150"	"1589.93572"	"1589.93369"	"1.28"	"0.00102"	"7/80"	"7"	"80"	"2216189.59820557"	"HCD"	"MS2"	"12.601"	"187.4"	"100.000"	"54.6427"	"16715"	"16715"	"16688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.2"	""	"277.3"	""	"289.8"	""	"217.0"	"3.8"	"335.8"	"377.6"	""	"891"	"49"	"36.000"	"29.000"	"0.000563440042798399"	""	"0"	"0.0001613"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELQEIQLK"	"[K].mELQEIQLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"795.47150"	"1589.93572"	"1589.93369"	"1.28"	"0.00102"	"7/80"	"7"	"80"	"2216189.59820557"	"HCD"	"MS2"	"12.601"	"187.4"	"100.000"	"54.6427"	"16715"	"16715"	"16688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.2"	""	"277.3"	""	"289.8"	""	"217.0"	"3.8"	"335.8"	"377.6"	""	"891"	"49"	"36.000"	"29.000"	"0.000563440042798399"	""	"0"	"0.0001613"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEIQEIQLK"	"[K].mEIQEIQLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"795.47333"	"1589.93938"	"1589.93369"	"3.58"	"0.00285"	"8/80"	"8"	"80"	"2077712.77490234"	"HCD"	"MS2"	"0"	"163.4"	"100.000"	"54.8030"	"16834"	"16834"	"16805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"235.1"	""	"251.7"	""	"241.3"	""	"188.4"	""	"313.0"	"319.7"	""	"851"	"48"	"36.000"	"29.000"	"0.000642539105596845"	"29"	"0.0001308"	"0.0002136"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELQEIQLK"	"[K].mELQEIQLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"795.47333"	"1589.93938"	"1589.93369"	"3.58"	"0.00285"	"8/80"	"8"	"80"	"2077712.77490234"	"HCD"	"MS2"	"0"	"163.4"	"100.000"	"54.8030"	"16834"	"16834"	"16805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"235.1"	""	"251.7"	""	"241.3"	""	"188.4"	""	"313.0"	"319.7"	""	"851"	"48"	"36.000"	"29.000"	"0.000642539105596845"	"29"	"0.0001308"	"0.0002136"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIFLDLIELQR"	"[K].tIFLDLIELQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63448"	"Peroxisomal acyl-coenzyme A oxidase 3 OS=Rattus norvegicus OX=10116 GN=Acox3 PE=1 SV=1"	"Q63448"	"Peroxisomal acyl-coenzyme A oxidase 3 OS=Rattus norvegicus OX=10116 GN=Acox3 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"795.47675"	"1589.94621"	"1589.94641"	"-0.12"	"-0.00010"	"7/96"	"7"	"96"	"117725.023681641"	"HCD"	"MS2"	"100"	"9.5"	"100.000"	"84.4009"	"28840"	"28840"	"28817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.9"	""	"12.0"	"2.0"	"13.8"	""	"16.7"	""	"17.6"	"17.5"	""	"805"	"12"	"36.000"	"29.000"	"2.55720700070327"	"22"	"0.002711"	"0.04107"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIFLDLIELQR"	"[K].tIFLDLIELQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63448"	"Peroxisomal acyl-coenzyme A oxidase 3 OS=Rattus norvegicus OX=10116 GN=Acox3 PE=1 SV=1"	"Q63448"	"Peroxisomal acyl-coenzyme A oxidase 3 OS=Rattus norvegicus OX=10116 GN=Acox3 PE=1 SV=1"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"795.47693"	"1589.94658"	"1589.94641"	"0.11"	"0.00009"	"5/96"	"5"	"96"	"133287.69744873"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"84.4486"	"28911"	"28911"	"28881"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.2"	""	"13.1"	""	"14.2"	""	"15.4"	""	"16.0"	"17.5"	""	"803"	"27"	"36.000"	"29.000"	"0.0846614202198216"	""	"0.001058"	"0.01394"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLIGLGTWK"	"[K].mPLIGLGTWk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"530.65405"	"1589.94760"	"1589.94894"	"-0.84"	"-0.00045"	"8/72"	"8"	"72"	"4382022.69580078"	"HCD"	"MS2"	"21.40788"	"108.8"	"100.000"	"61.1155"	"19409"	"19409"	"19379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.3"	""	"155.2"	""	"170.4"	""	"231.0"	""	"173.5"	"164.4"	""	"764"	"47"	"35.000"	"28.000"	"0.000726211902930701"	"22"	"0"	"4.333E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLIGLGTWK"	"[K].mPLIGLGTWk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.47791"	"1589.94853"	"1589.94894"	"-0.26"	"-0.00020"	"9/72"	"9"	"72"	"2502067.00848389"	"HCD"	"MS2"	"0"	"162.0"	"100.000"	"61.0900"	"19398"	"19398"	"19379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.9"	""	"229.7"	""	"257.8"	""	"369.9"	"0.4"	"245.2"	"229.7"	""	"753"	"46"	"35.000"	"28.000"	"0.000862511671267067"	"15"	"0.0001889"	"0.000851"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLIGLGTWK"	"[K].mPLIGLGTWk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"530.65460"	"1589.94925"	"1589.94894"	"0.20"	"0.00010"	"11/72"	"11"	"72"	"4437919.75842285"	"HCD"	"MS2"	"8.188336"	"113.2"	"100.000"	"60.9731"	"19297"	"19297"	"19273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.1"	"2.6"	"151.0"	""	"188.6"	""	"246.8"	""	"179.4"	"174.9"	""	"745"	"38"	"35.000"	"28.000"	"0.0052981747320325"	"24"	"0"	"7.215E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPLIGLGTWK"	"[K].mPLIGLGTWk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.47839"	"1589.94951"	"1589.94894"	"0.36"	"0.00028"	"8/72"	"8"	"72"	"2921047.25537109"	"HCD"	"MS2"	"0"	"188.2"	"100.000"	"60.9662"	"19294"	"19294"	"19273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.4"	""	"270.4"	""	"312.2"	""	"413.9"	""	"293.1"	"267.0"	""	"752"	"43"	"35.000"	"28.000"	"0.00180379776687395"	"15"	"0.0001889"	"0.0004662"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLSNLDEIK"	"[K].sLLSNLDEIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"795.47852"	"1589.94975"	"1589.95144"	"-1.06"	"-0.00084"	"8/96"	"8"	"96"	"760179.178405762"	"HCD"	"MS2"	"0"	"69.7"	"100.000"	"59.7723"	"18807"	"18807"	"18777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.0"	""	"83.7"	""	"95.2"	""	"123.9"	""	"144.7"	"127.4"	""	"752"	"34"	"35.000"	"28.000"	"0.0154236742722964"	"21"	"0.0001308"	"0.0002997"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFINHNIK"	"[R].vFFINHNIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"530.65521"	"1589.95108"	"1589.95680"	"-3.60"	"-0.00191"	"5/74"	"5"	"74"	"4531692.79559326"	"HCD"	"MS2"	"44.96913"	"257.5"	"100.000"	"43.0055"	"12047"	"12047"	"12019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.8"	""	"342.8"	""	"365.7"	""	"420.3"	"21.9"	"495.0"	"473.5"	""	"753"	"16"	"35.000"	"28.000"	"0.934899614143782"	"17"	"0.000523"	"0.003225"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFINHNIK"	"[R].vFFINHNIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.65582"	"1589.95292"	"1589.95680"	"-2.45"	"-0.00130"	"8/74"	"8"	"74"	"5100294.48486328"	"HCD"	"MS2"	"20.92643"	"170.6"	"60.142"	"42.7080"	"11881"	"11881"	"11852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.3"	""	"220.8"	""	"248.1"	""	"285.9"	"8.6"	"327.0"	"302.3"	""	"770"	"23"	"35.000"	"28.000"	"0.18987191452265"	"14"	"0.0001889"	"0.0009307"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLSNLDEIK"	"[K].sLLSNLDEIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.48041"	"1589.95354"	"1589.95144"	"1.32"	"0.00105"	"12/96"	"12"	"96"	"639068.421936035"	"HCD"	"MS2"	"0"	"64.0"	"100.000"	"59.9033"	"18914"	"18914"	"18884"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.4"	""	"83.0"	""	"80.9"	""	"114.2"	"0.9"	"122.6"	"110.7"	""	"729"	"13"	"35.000"	"28.000"	"1.89102614189606"	"13"	"0.0003839"	"0.001962"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLDAAIFLAK"	"[K].aVLDAAIFLAk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A0A0G2JXT6"	"Myotubularin-related protein 6 OS=Rattus norvegicus OX=10116 GN=Mtmr6 PE=1 SV=1"	"A0A0G2JXT6"	"Myotubularin-related protein 6 OS=Rattus norvegicus OX=10116 GN=Mtmr6 PE=1 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"530.67273"	"1590.00364"	"1590.00309"	"0.35"	"0.00018"	"7/80"	"7"	"80"	"357012.349975586"	"HCD"	"MS2"	"50.71143"	"14.9"	"100.000"	"78.7554"	"26589"	"26589"	"26559"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.0"	""	"19.3"	""	"22.3"	""	"17.4"	""	"32.4"	"32.1"	""	"336"	"19"	"32.000"	"25.000"	"0.196475897691338"	"17"	"0.0001889"	"0.0005815"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTIPTKK"	"[R].nTTIPTkk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.67725"	"1590.01719"	"1590.01935"	"-1.36"	"-0.00072"	"6/78"	"6"	"78"	"7662929.74975586"	"HCD"	"MS2"	"15.72375"	"480.7"	"100.000"	"29.3307"	"6417"	"6417"	"6390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"998.0"	""	"807.9"	""	"802.5"	""	"615.0"	""	"621.2"	"685.3"	""	"254"	"2"	"31.000"	"24.000"	"7.25777868573271"	"13"	"0.001058"	"0.01342"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTIPTKK"	"[R].nTTIPTkk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.67773"	"1590.01865"	"1590.01935"	"-0.44"	"-0.00023"	"3/78"	"3"	"78"	"7640078.22338867"	"HCD"	"MS2"	"15.31636"	"485.3"	"100.000"	"29.3909"	"6483"	"6483"	"6454"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1013.5"	""	"792.2"	""	"812.4"	""	"629.6"	"2.0"	"625.1"	"697.2"	""	"256"	"2"	"31.000"	"24.000"	"7.36563119791561"	"13"	"0.001286"	"0.01888"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSFIPPDGNFR"	"[R].vLSFIPPDGNFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P53676"	"AP-3 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap3m1 PE=1 SV=1"	"P53676"	"AP-3 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap3m1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.94403"	"1590.88078"	"1590.88414"	"-2.11"	"-0.00168"	"6/102"	"6"	"102"	"616868.000976563"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"65.2750"	"21054"	"21054"	"21033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.9"	""	"55.2"	""	"65.8"	""	"78.6"	""	"78.4"	"81.3"	""	"1128"	"13"	"37.000"	"30.000"	"2.53675838159815"	"13"	"0.0003839"	"0.001871"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSFIPPDGNFR"	"[R].vLSFIPPDGNFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P53676"	"AP-3 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap3m1 PE=1 SV=1"	"P53676"	"AP-3 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap3m1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.94489"	"1590.88249"	"1590.88414"	"-1.04"	"-0.00082"	"6/102"	"6"	"102"	"826072.669494629"	"HCD"	"MS2"	"18.62482"	"56.3"	"100.000"	"65.3084"	"21121"	"21121"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.8"	""	"63.6"	""	"75.7"	""	"99.6"	""	"110.6"	"111.1"	""	"1132"	"38"	"37.000"	"30.000"	"0.00821895175554661"	"15"	"0.0001889"	"0.0004254"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGMILLAGEITSR"	"[K].tGMILLAGEITSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"2"	"2"	"0.9322"	"0.0000"	"1"	"1"	"1"	"795.95837"	"1590.90947"	"1590.90864"	"0.52"	"0.00041"	"10/118"	"10"	"118"	"854978.383605957"	"HCD"	"MS2"	"0"	"62.1"	"100.000"	"62.1205"	"19766"	"19766"	"19737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.9"	""	"85.0"	""	"101.1"	""	"85.7"	"0.8"	"106.3"	"121.4"	""	"973"	"59"	"36.000"	"29.000"	"6.71556944729303E-05"	"20"	"0"	"8.627E-06"	"1.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGMILLAGEITSR"	"[K].tGMILLAGEITSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"795.95862"	"1590.90996"	"1590.90864"	"0.83"	"0.00066"	"16/118"	"16"	"118"	"926447.134338379"	"HCD"	"MS2"	"13.37119"	"62.1"	"100.000"	"62.2153"	"19858"	"19858"	"19827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.4"	""	"96.0"	""	"85.8"	""	"78.4"	""	"124.8"	"118.2"	""	"990"	"55"	"36.000"	"29.000"	"0.000164666478880532"	"23"	"0"	"3.279E-06"	"1.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIAAQYSGAQIR"	"[K].aLIAAQYSGAQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"795.96063"	"1590.91399"	"1590.91651"	"-1.58"	"-0.00126"	"10/110"	"10"	"110"	"854758.096374512"	"HCD"	"MS2"	"0"	"50.9"	"100.000"	"42.0221"	"11647"	"11647"	"11618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.0"	""	"61.5"	""	"75.9"	""	"87.1"	"0.2"	"100.5"	"91.4"	""	"935"	"54"	"36.000"	"29.000"	"0.000171704475482855"	"21"	"0"	"1.116E-06"	"1.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMIPVPYVEK"	"[R].gMIPVPYVEk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.96997"	"1590.93266"	"1590.93296"	"-0.18"	"-0.00015"	"12/72"	"12"	"72"	"1922330.87139893"	"HCD"	"MS2"	"35.82028"	"130.2"	"100.000"	"55.8797"	"17221"	"17221"	"17195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.6"	""	"173.5"	""	"176.1"	""	"168.1"	""	"264.5"	"260.9"	""	"779"	"17"	"35.000"	"28.000"	"0.762970000330582"	"14"	"0.000523"	"0.003092"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMIPVPYVEK"	"[R].gMIPVPYVEk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"795.97009"	"1590.93291"	"1590.93296"	"-0.03"	"-0.00002"	"13/72"	"13"	"72"	"1447360.45184326"	"HCD"	"MS2"	"0"	"100.8"	"100.000"	"56.0581"	"17348"	"17348"	"17317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.5"	"2.9"	"134.1"	""	"143.4"	""	"136.1"	"1.5"	"194.8"	"197.2"	""	"779"	"36"	"35.000"	"28.000"	"0.00896411587880612"	"17"	"0.0001889"	"0.0006051"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMIPVPYVEK"	"[R].gMIPVPYVEk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.97034"	"1590.93340"	"1590.93296"	"0.28"	"0.00022"	"10/72"	"10"	"72"	"721654.621154785"	"HCD"	"MS2"	"16.15973"	"58.5"	"100.000"	"56.4078"	"17491"	"17491"	"17461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.0"	""	"76.5"	""	"87.9"	""	"75.8"	""	"115.1"	"114.4"	""	"776"	"11"	"35.000"	"28.000"	"2.80434683797642"	"13"	"0.000523"	"0.003182"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSLLESLEK"	"[K].vDSLLESLEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"795.97034"	"1590.93340"	"1590.93546"	"-1.30"	"-0.00103"	"9/86"	"9"	"86"	"1515805.31182861"	"HCD"	"MS2"	"0"	"121.9"	"100.000"	"71.2113"	"23521"	"23521"	"23498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.8"	""	"68.6"	""	"67.5"	""	"302.3"	"0.2"	"316.8"	"294.2"	""	"776"	"69"	"35.000"	"28.000"	"4.48571549970534E-06"	"26"	"0"	"2.225E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSLLESLEK"	"[K].vDSLLESLEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"530.98285"	"1590.93399"	"1590.93546"	"-0.92"	"-0.00049"	"10/86"	"10"	"86"	"2352573.95495605"	"HCD"	"MS2"	"2.993107"	"67.8"	"100.000"	"71.2504"	"23537"	"23537"	"23514"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.9"	""	"47.0"	""	"43.9"	""	"153.1"	""	"177.8"	"155.2"	""	"784"	"27"	"35.000"	"28.000"	"0.0718267253569514"	"23"	"0"	"0.0001122"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSLLESLEK"	"[K].vDSLLESLEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"795.97083"	"1590.93437"	"1590.93546"	"-0.68"	"-0.00054"	"16/86"	"16"	"86"	"1293011.44647217"	"HCD"	"MS2"	"10.43852"	"108.7"	"100.000"	"71.2520"	"23486"	"23486"	"23459"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.2"	""	"71.2"	""	"61.9"	""	"273.5"	""	"267.3"	"254.7"	""	"780"	"57"	"35.000"	"28.000"	"7.72795540063988E-05"	"24"	"0"	"1.728E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSLLESLEK"	"[K].vDSLLESLEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.97089"	"1590.93450"	"1590.93546"	"-0.61"	"-0.00048"	"6/86"	"6"	"86"	"368899.200012207"	"HCD"	"MS2"	"13.82555"	"26.5"	"100.000"	"71.5428"	"23657"	"23657"	"23626"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.3"	""	"26.4"	""	"30.5"	""	"52.8"	""	"59.3"	"48.9"	""	"778"	"6"	"35.000"	"28.000"	"9.59289302184159"	"13"	"0.005478"	"0.1751"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSLLESLEK"	"[K].vDSLLESLEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"530.98328"	"1590.93528"	"1590.93546"	"-0.12"	"-0.00006"	"9/86"	"9"	"86"	"2229963.70788574"	"HCD"	"MS2"	"6.861001"	"64.5"	"100.000"	"71.3671"	"23533"	"23533"	"23507"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.0"	""	"43.0"	""	"42.5"	""	"149.3"	"0.7"	"169.4"	"152.6"	""	"816"	"33"	"36.000"	"29.000"	"0.020972980984563"	"24"	"0"	"0.0001201"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSLLESLEK"	"[K].vDSLLESLEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.97137"	"1590.93547"	"1590.93546"	"0.01"	"0.00001"	"12/86"	"12"	"86"	"411448.356506348"	"HCD"	"MS2"	"27.34393"	"31.6"	"100.000"	"71.5629"	"23613"	"23613"	"23587"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.1"	""	"33.9"	""	"26.6"	""	"58.0"	""	"85.7"	"58.5"	""	"811"	"23"	"36.000"	"29.000"	"0.227504954281167"	"14"	"0.0001889"	"0.0009224"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGYVTHLMK"	"[K].iAGYVTHLMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04644"	"40S ribosomal protein S17 OS=Rattus norvegicus OX=10116 GN=Rps17 PE=1 SV=3"	"P04644"	"40S ribosomal protein S17 OS=Rattus norvegicus OX=10116 GN=Rps17 PE=1 SV=3"	"0"	"3"	"3"	"0.8113"	"0.0000"	"1"	"1"	"1"	"530.98529"	"1590.94132"	"1590.94419"	"-1.81"	"-0.00096"	"14/72"	"14"	"72"	"20157240.5516968"	"HCD"	"MS2"	"15.69441"	"382.2"	"71.444"	"49.5159"	"14693"	"14693"	"14670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"599.2"	""	"649.6"	""	"659.8"	""	"470.2"	""	"599.2"	"637.4"	""	"704"	"53"	"35.000"	"28.000"	"0.00018473222600792"	"26"	"0"	"1.247E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGYVTHLMK"	"[K].iAGYVTHLMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04644"	"40S ribosomal protein S17 OS=Rattus norvegicus OX=10116 GN=Rps17 PE=1 SV=3"	"P04644"	"40S ribosomal protein S17 OS=Rattus norvegicus OX=10116 GN=Rps17 PE=1 SV=3"	"0"	"3"	"3"	"0.8367"	"0.0000"	"1"	"1"	"1"	"530.98590"	"1590.94315"	"1590.94419"	"-0.65"	"-0.00035"	"14/72"	"14"	"72"	"15412137.0515747"	"HCD"	"MS2"	"9.777506"	"435.2"	"100.000"	"49.2293"	"14532"	"14532"	"14511"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"644.9"	""	"711.9"	""	"774.2"	""	"582.1"	"5.7"	"709.9"	"684.3"	""	"664"	"49"	"35.000"	"28.000"	"0.000411280466728083"	"24"	"0"	"3.602E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAALEFLNR"	"[R].kAAALEFLNR.[F]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.99548"	"1590.97190"	"1590.97318"	"-0.81"	"-0.00043"	"6/90"	"6"	"90"	"7073295.38397217"	"HCD"	"MS2"	"31.08593"	"321.9"	"100.000"	"42.6617"	"11906"	"11906"	"11875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"577.5"	""	"486.9"	""	"485.1"	""	"479.9"	"1.3"	"505.7"	"504.1"	""	"608"	"20"	"34.000"	"27.000"	"0.293004023181687"	"14"	"0"	"0.0001459"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAAALEFLNR"	"[R].kAAALEFLNR.[F]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.99585"	"1590.97300"	"1590.97318"	"-0.12"	"-0.00006"	"7/90"	"7"	"90"	"6800523.15466309"	"HCD"	"MS2"	"35.61707"	"311.8"	"100.000"	"42.3962"	"11753"	"11753"	"11724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"565.0"	""	"434.2"	""	"483.3"	""	"443.7"	""	"498.5"	"527.0"	""	"590"	"11"	"34.000"	"27.000"	"2.11262306012806"	"13"	"0"	"0.0001025"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDKEAIK"	"[K].sLDkEAIk.[E]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"531.00433"	"1590.99845"	"1591.00337"	"-3.09"	"-0.00164"	"10/72"	"10"	"72"	"83044132.5214844"	"HCD"	"MS2"	"27.68549"	"585.2"	"8.566"	"33.7999"	"8237"	"8237"	"8220"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1121.5"	""	"910.0"	""	"869.2"	""	"959.2"	""	"785.3"	"882.2"	""	"422"	"1"	"33.000"	"26.000"	"15.3208357018818"	"13"	"0.003137"	"0.0634"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KADIDLTK"	"[R].kADIDLTk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"531.00598"	"1591.00339"	"1591.00337"	"0.01"	"0.00001"	"7/78"	"7"	"78"	"34368370.9433594"	"HCD"	"MS2"	"22.37345"	"762.5"	"41.620"	"35.5379"	"8946"	"8946"	"8923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1143.8"	""	"893.1"	""	"1034.0"	""	"1381.2"	"2.1"	"1481.9"	"1287.8"	""	"383"	"24"	"32.000"	"25.000"	"0.080941039631863"	"14"	"0.0003839"	"0.001745"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KADIDLTK"	"[R].kADIDLTk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"531.00598"	"1591.00339"	"1591.00337"	"0.01"	"0.00001"	"7/78"	"7"	"78"	"31824638.8675537"	"HCD"	"MS2"	"20.80033"	"837.6"	"45.296"	"35.5863"	"9009"	"9009"	"8986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1277.9"	""	"1004.7"	""	"1120.6"	""	"1554.1"	"3.8"	"1578.5"	"1393.3"	""	"383"	"23"	"32.000"	"25.000"	"0.105237077343735"	"14"	"0.0003146"	"0.001422"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFDMFAPK"	"[K].dYFDMFAPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"531.27814"	"1591.81986"	"1591.82307"	"-2.02"	"-0.00107"	"9/70"	"9"	"70"	"2959694.18969727"	"HCD"	"MS2"	"38.81577"	"86.8"	"100.000"	"66.7782"	"21668"	"21668"	"21641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.1"	""	"124.2"	""	"119.8"	""	"122.6"	""	"153.2"	"181.9"	""	"888"	"19"	"36.000"	"29.000"	"0.624285100713681"	"19"	"0.0001889"	"0.000816"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFDMFAPK"	"[K].dYFDMFAPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"531.27850"	"1591.82096"	"1591.82307"	"-1.33"	"-0.00071"	"7/70"	"7"	"70"	"3963818.21697998"	"HCD"	"MS2"	"23.15408"	"102.7"	"100.000"	"66.7384"	"21704"	"21704"	"21683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.0"	""	"153.9"	""	"144.8"	""	"132.6"	""	"196.1"	"202.7"	""	"878"	"43"	"36.000"	"29.000"	"0.00231987465529304"	"23"	"0.0003146"	"0.001402"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFDMFAPK"	"[K].dYFDMFAPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"796.41461"	"1591.82195"	"1591.82307"	"-0.71"	"-0.00056"	"6/70"	"6"	"70"	"1252706.90435791"	"HCD"	"MS2"	"17.12434"	"115.3"	"100.000"	"66.6806"	"21681"	"21681"	"21651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.7"	""	"158.8"	""	"171.5"	""	"129.3"	""	"237.7"	"240.0"	""	"880"	"43"	"36.000"	"29.000"	"0.002309152825099"	"27"	"0"	"0.0001475"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFDMFAPK"	"[K].dYFDMFAPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"796.41498"	"1591.82268"	"1591.82307"	"-0.25"	"-0.00020"	"6/70"	"6"	"70"	"1028499.1206665"	"HCD"	"MS2"	"13.35242"	"98.3"	"100.000"	"66.7413"	"21653"	"21653"	"21625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.7"	""	"144.5"	""	"138.3"	""	"123.8"	"0.3"	"185.4"	"206.6"	""	"878"	"37"	"36.000"	"29.000"	"0.00852048900263229"	"22"	"0.0001308"	"0.0002378"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFLASQVPFPSR"	"[R].nFLASQVPFPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"796.44312"	"1591.87895"	"1591.87939"	"-0.28"	"-0.00022"	"9/122"	"9"	"122"	"3924270.74157715"	"HCD"	"MS2"	"21.89201"	"194.6"	"100.000"	"54.8912"	"16816"	"16816"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"293.4"	""	"260.7"	""	"268.8"	""	"306.9"	"1.1"	"345.8"	"366.3"	""	"1037"	"45"	"37.000"	"30.000"	"0.00182284088413923"	"19"	"0"	"2.915E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NFLASQVPFPSR"	"[R].nFLASQVPFPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"796.44318"	"1591.87908"	"1591.87939"	"-0.20"	"-0.00016"	"12/122"	"12"	"122"	"1415191.00689697"	"HCD"	"MS2"	"56.03956"	"136.7"	"100.000"	"55.4231"	"17088"	"17088"	"17061"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.4"	""	"193.8"	""	"216.6"	""	"198.8"	"2.5"	"229.2"	"286.8"	""	"1033"	"2"	"37.000"	"30.000"	"29.8586608485053"	"15"	"0.0003839"	"0.001908"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFLASQVPFPSR"	"[R].nFLASQVPFPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"796.44354"	"1591.87981"	"1591.87939"	"0.26"	"0.00021"	"10/122"	"10"	"122"	"4120112.58624268"	"HCD"	"MS2"	"17.62803"	"203.8"	"100.000"	"55.0924"	"16952"	"16952"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.5"	""	"274.2"	""	"292.4"	""	"319.1"	"4.0"	"368.5"	"361.2"	""	"1035"	"45"	"37.000"	"30.000"	"0.00152725077479985"	"20"	"0"	"2.093E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPAEISSLFER"	"[R].iTPAEISSLFER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"796.44702"	"1591.88677"	"1591.88929"	"-1.58"	"-0.00126"	"7/106"	"7"	"106"	"578620.67980957"	"HCD"	"MS2"	"6.69024"	"31.0"	"100.000"	"74.7994"	"24934"	"24934"	"24913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.9"	""	"39.2"	""	"36.5"	""	"59.5"	""	"65.2"	"59.5"	""	"1043"	"31"	"37.000"	"30.000"	"0.0423891114179578"	"18"	"0"	"0.0001592"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMQTLLSLVK"	"[K].tMQTLLSLVk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5692"	"0.0000"	"1"	"1"	"1"	"796.49561"	"1591.98393"	"1591.98572"	"-1.12"	"-0.00089"	"9/98"	"9"	"98"	"944172.200927734"	"HCD"	"MS2"	"0"	"74.6"	"100.000"	"75.7805"	"25334"	"25334"	"25313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.1"	""	"116.0"	""	"127.1"	""	"82.2"	"0.2"	"127.0"	"133.4"	""	"448"	"65"	"33.000"	"26.000"	"7.03473947428272E-06"	""	"0"	"1.467E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMQTLLSLVK"	"[K].tMQTLLSLVk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"0.5250"	"0.0000"	"1"	"1"	"1"	"531.33301"	"1591.98447"	"1591.98572"	"-0.79"	"-0.00042"	"10/98"	"10"	"98"	"1504595.097229"	"HCD"	"MS2"	"15.82822"	"39.0"	"100.000"	"75.8289"	"25354"	"25354"	"25329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.5"	""	"57.4"	""	"71.2"	""	"43.5"	""	"62.7"	"74.6"	""	"440"	"40"	"33.000"	"26.000"	"0.00215487796789913"	""	"0.0001859"	"0.0003623"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMQTLLSLVK"	"[K].tMQTLLSLVk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"796.49609"	"1591.98491"	"1591.98572"	"-0.51"	"-0.00041"	"8/98"	"8"	"98"	"330127.117980957"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"76.0554"	"25494"	"25494"	"25471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.9"	""	"45.6"	""	"40.6"	""	"26.3"	""	"51.8"	"46.9"	""	"436"	"28"	"33.000"	"26.000"	"0.03330094006959"	"22"	"0.0001859"	"0.0003609"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMQTLLSLVK"	"[K].tMQTLLSLVk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"796.49609"	"1591.98491"	"1591.98572"	"-0.51"	"-0.00041"	"9/98"	"9"	"98"	"894281.145080566"	"HCD"	"MS2"	"5.015961"	"68.3"	"100.000"	"75.7312"	"25366"	"25366"	"25343"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.5"	""	"104.8"	""	"110.6"	""	"78.7"	"4.5"	"114.2"	"122.5"	""	"436"	"65"	"33.000"	"26.000"	"7.16896555309643E-06"	""	"0"	"8.318E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMQTLLSLVK"	"[K].tMQTLLSLVk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"0.6222"	"0.0000"	"1"	"1"	"1"	"531.33319"	"1591.98502"	"1591.98572"	"-0.44"	"-0.00023"	"11/98"	"11"	"98"	"1633304.28759766"	"HCD"	"MS2"	"6.534613"	"40.1"	"100.000"	"75.8031"	"25395"	"25395"	"25375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.3"	""	"57.8"	""	"69.2"	""	"44.4"	"0.5"	"66.0"	"74.1"	""	"434"	"45"	"33.000"	"26.000"	"0.000728550622907211"	""	"0.0001889"	"0.0005497"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMQTLLSLVK"	"[K].tMQTLLSLVk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"796.49615"	"1591.98503"	"1591.98572"	"-0.43"	"-0.00034"	"12/98"	"12"	"98"	"269069.57421875"	"HCD"	"MS2"	"15.57604"	"24.1"	"100.000"	"76.0968"	"25463"	"25463"	"25441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.1"	""	"29.3"	""	"40.8"	""	"34.6"	""	"41.8"	"48.8"	""	"434"	"31"	"33.000"	"26.000"	"0.0177606859025249"	""	"0.0001308"	"0.0002073"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPSTSPVTGYR"	"[R].wLPSTSPVTGYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"796.93542"	"1592.86357"	"1592.86341"	"0.10"	"0.00008"	"9/98"	"9"	"98"	"1482803.93341064"	"HCD"	"MS2"	"100"	"87.0"	"100.000"	"50.8121"	"15220"	"15220"	"15190"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.9"	""	"122.8"	""	"107.0"	""	"141.2"	""	"171.6"	"157.1"	""	"1078"	"12"	"37.000"	"30.000"	"3.08737060701362"	"21"	"0.0009727"	"0.01061"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPSTSPVTGYR"	"[R].wLPSTSPVTGYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"796.94086"	"1592.87444"	"1592.86341"	"6.92"	"0.00551"	"8/98"	"8"	"98"	"876945.577270508"	"HCD"	"MS2"	"0"	"60.3"	"100.000"	"50.5360"	"15057"	"15057"	"15026"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.3"	""	"86.6"	""	"81.7"	""	"81.7"	"0.9"	"112.1"	"117.8"	""	"1026"	"17"	"37.000"	"30.000"	"1.0595400199308"	"19"	"0.001966"	"0.02778"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVVAGYGDVGK"	"[K].vAVVAGYGDVGk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"796.96637"	"1592.92546"	"1592.94121"	"-9.89"	"-0.00788"	"8/88"	"8"	"88"	"2278653.62091064"	"HCD"	"MS2"	"0"	"177.1"	"100.000"	"43.5917"	"12281"	"12281"	"12258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"172.7"	""	"205.3"	""	"197.6"	""	"313.4"	""	"401.1"	"401.5"	""	"825"	"43"	"36.000"	"29.000"	"0.00195624818919851"	"22"	"0"	"1.716E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYNQAPGK"	"[K].kYNQAPGk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"5"	"531.66193"	"1592.97123"	"1592.97274"	"-0.95"	"-0.00050"	"6/72"	"6"	"72"	"6056071.37915039"	"HCD"	"MS2"	"19.02595"	"343.8"	"100.000"	"26.0708"	"5132"	"5132"	"5119"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"609.7"	""	"482.4"	""	"474.1"	""	"483.7"	""	"597.0"	"608.6"	""	"568"	"6"	"34.000"	"27.000"	"7.16668539384483"	"13"	"0.0003571"	"0.001509"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KNGFVVLK"	"[R].knGFVVLk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); N2(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"1"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"531.68274"	"1593.03366"	"1593.03428"	"-0.38"	"-0.00020"	"6/72"	"6"	"72"	"19002398.6751709"	"HCD"	"MS2"	"21.53482"	"276.8"	"29.476"	"41.9282"	"11608"	"11608"	"11586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"346.3"	""	"335.0"	""	"407.9"	""	"470.2"	"1.5"	"534.7"	"528.8"	""	"129"	"24"	"28.000"	"21.000"	"0.0246921959439351"	""	"0.0001889"	"0.0005969"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCSQYAAYGK"	"[R].vcSQYAAYGk.[E]"	"N-Term(TMT6plex); C2(Methylthio); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.9538"	"0.0000"	"1"	"1"	"1"	"797.41034"	"1593.81340"	"1593.81694"	"-2.22"	"-0.00177"	"18/84"	"18"	"84"	"2355450.56005859"	"HCD"	"MS2"	"33.55938"	"212.0"	"100.000"	"43.9124"	"12412"	"12412"	"12384"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.0"	""	"402.1"	""	"404.5"	""	"259.7"	""	"255.0"	"263.4"	""	"859"	"65"	"36.000"	"29.000"	"1.3550744857394E-05"	"20"	"0"	"2.44E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCSQYAAYGK"	"[R].vcSQYAAYGk.[E]"	"N-Term(TMT6plex); C2(Methylthio); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.9844"	"0.0000"	"1"	"1"	"1"	"797.41156"	"1593.81584"	"1593.81694"	"-0.69"	"-0.00055"	"9/84"	"9"	"84"	"2424299.52801514"	"HCD"	"MS2"	"0"	"221.5"	"100.000"	"43.6303"	"12248"	"12248"	"12221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"416.1"	""	"396.6"	""	"413.6"	""	"284.1"	"5.5"	"290.2"	"280.5"	""	"880"	"64"	"36.000"	"29.000"	"1.83845361324514E-05"	"18"	"0"	"3.65E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNEVISLWK"	"[R].mNEVISLWk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"797.45782"	"1593.90837"	"1593.90747"	"0.57"	"0.00045"	"8/84"	"8"	"84"	"1238368.80169678"	"HCD"	"MS2"	"45.81425"	"94.3"	"100.000"	"55.8519"	"17210"	"17210"	"17179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.0"	""	"127.1"	""	"124.6"	""	"162.0"	""	"175.8"	"198.2"	""	"922"	"14"	"36.000"	"29.000"	"1.78525774308865"	"22"	"0.003137"	"0.0634"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGITPWASFK"	"[R].eGITPWASFk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"531.97650"	"1593.91495"	"1593.90410"	"6.81"	"0.00362"	"9/86"	"9"	"86"	"5496809.1171875"	"HCD"	"MS2"	"4.098658"	"183.2"	"100.000"	"58.2441"	"18241"	"18241"	"18213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"263.3"	""	"220.8"	""	"246.1"	""	"317.1"	""	"361.7"	"331.0"	""	"900"	"10"	"36.000"	"29.000"	"4.49999999999999"	"21"	"0.001945"	"0.02741"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSSGLVTAALYGR"	"[R].gLSSGLVTAALYGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVF9"	"Biotinidase OS=Rattus norvegicus OX=10116 GN=Btd PE=2 SV=1"	"Q5FVF9"	"Biotinidase OS=Rattus norvegicus OX=10116 GN=Btd PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.46185"	"1593.91643"	"1593.91617"	"0.16"	"0.00013"	"11/114"	"11"	"114"	"2132679.08520508"	"HCD"	"MS2"	"19.49092"	"88.8"	"100.000"	"58.7300"	"18386"	"18386"	"18361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.8"	""	"123.1"	""	"132.1"	""	"115.2"	"3.6"	"153.3"	"156.4"	""	"921"	"25"	"36.000"	"29.000"	"0.160779115277889"	"14"	"0"	"6.381E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIQQNTFTR"	"[K].kIQQNTFTR.[W]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"531.98639"	"1593.94461"	"1593.94770"	"-1.93"	"-0.00103"	"7/84"	"7"	"84"	"2759967.59936523"	"HCD"	"MS2"	"31.68916"	"190.2"	"100.000"	"28.2292"	"6045"	"6045"	"6017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.8"	""	"297.2"	""	"299.7"	""	"259.2"	""	"295.9"	"304.7"	""	"752"	"17"	"35.000"	"28.000"	"0.783768572044581"	"14"	"0.0001889"	"0.0004156"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDGIYIINLK"	"[K].sDGIYIINLk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"531.99213"	"1593.96183"	"1593.96161"	"0.13"	"0.00007"	"8/78"	"8"	"78"	"3675357.7008667"	"HCD"	"MS2"	"27.06832"	"99.6"	"100.000"	"60.5162"	"19164"	"19164"	"19139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.7"	""	"149.0"	""	"158.1"	""	"127.3"	""	"174.9"	"182.6"	""	"621"	"39"	"34.000"	"27.000"	"0.00386421786955015"	"27"	"0.0001889"	"0.0005081"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDGIYIINLK"	"[K].sDGIYIINLk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"797.48492"	"1593.96257"	"1593.96161"	"0.60"	"0.00048"	"7/78"	"7"	"78"	"1949693.79919434"	"HCD"	"MS2"	"51.55747"	"151.2"	"100.000"	"60.3828"	"19056"	"19056"	"19033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"206.2"	""	"219.1"	""	"228.4"	""	"238.9"	""	"283.3"	"258.7"	""	"620"	"23"	"34.000"	"27.000"	"0.150093433951071"	"15"	"0.0001889"	"0.00103"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDGIYIINLK"	"[K].sDGIYIINLk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"797.48517"	"1593.96306"	"1593.96161"	"0.91"	"0.00072"	"9/78"	"9"	"78"	"1593682.7010498"	"HCD"	"MS2"	"36.64035"	"119.1"	"100.000"	"60.4885"	"19153"	"19153"	"19123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.7"	""	"172.0"	""	"173.2"	""	"198.9"	""	"220.4"	"216.2"	""	"620"	"52"	"34.000"	"27.000"	"0.000185935233639208"	"21"	"0"	"6.803E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDGIYIINLK"	"[K].sDGIYIINLk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"531.99280"	"1593.96384"	"1593.96161"	"1.40"	"0.00074"	"8/78"	"8"	"78"	"3867119.66424561"	"HCD"	"MS2"	"36.19197"	"110.5"	"100.000"	"60.3966"	"19062"	"19062"	"19033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.8"	""	"161.9"	""	"164.2"	""	"157.0"	"0.7"	"190.7"	"203.2"	""	"613"	"34"	"34.000"	"27.000"	"0.0112572025102663"	"25"	"0.0001308"	"0.0003118"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEPLMLSCK"	"[R].iGEPLMLSck.[G]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"532.29651"	"1594.87497"	"1594.87710"	"-1.33"	"-0.00071"	"13/82"	"13"	"82"	"5000732.82519531"	"HCD"	"MS2"	"7.275557"	"145.0"	"100.000"	"66.0644"	"21429"	"21429"	"21411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.0"	""	"226.5"	""	"218.0"	""	"163.2"	""	"286.9"	"300.3"	""	"1039"	"41"	"37.000"	"30.000"	"0.00385998442137337"	"20"	"0.0001308"	"0.0002371"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEPLMLSCK"	"[R].iGEPLMLSck.[G]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"532.29688"	"1594.87607"	"1594.87710"	"-0.64"	"-0.00034"	"8/82"	"8"	"82"	"3196980.49987793"	"HCD"	"MS2"	"5.681856"	"109.8"	"100.000"	"66.1786"	"21423"	"21423"	"21401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.8"	""	"165.5"	""	"162.9"	""	"137.0"	""	"219.9"	"234.1"	""	"1038"	"27"	"37.000"	"30.000"	"0.111216022198131"	"21"	"0.0001859"	"0.0003648"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEPLMLSCK"	"[R].iGEPLMLSck.[G]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"797.94189"	"1594.87651"	"1594.87710"	"-0.37"	"-0.00029"	"8/82"	"8"	"82"	"4130062.47900391"	"HCD"	"MS2"	"25.27261"	"313.7"	"100.000"	"65.9605"	"21387"	"21387"	"21363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"406.7"	""	"517.7"	""	"470.6"	""	"350.6"	"2.9"	"582.9"	"642.6"	""	"1034"	"44"	"37.000"	"30.000"	"0.00191201168946398"	"20"	"0"	"6.71E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEPLMLSCK"	"[R].iGEPLMLSck.[G]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"797.94214"	"1594.87700"	"1594.87710"	"-0.06"	"-0.00005"	"8/82"	"8"	"82"	"3835965.89416504"	"HCD"	"MS2"	"30.53176"	"291.6"	"100.000"	"66.0216"	"21359"	"21359"	"21337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"389.7"	""	"475.4"	""	"433.3"	""	"314.9"	""	"543.2"	"607.6"	""	"1032"	"44"	"37.000"	"30.000"	"0.00190392440862198"	"21"	"0"	"5.072E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEPLMLSCK"	"[R].iGEPLMLSck.[G]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.4419"	"0.0000"	"1"	"1"	"1"	"797.94269"	"1594.87810"	"1594.87710"	"0.63"	"0.00050"	"9/82"	"9"	"82"	"1468695.14660645"	"HCD"	"MS2"	"2.032829"	"128.4"	"100.000"	"66.2678"	"21512"	"21512"	"21491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.2"	""	"188.2"	""	"177.5"	""	"159.2"	"0.6"	"249.0"	"268.1"	""	"1019"	"43"	"37.000"	"30.000"	"0.00257124931108618"	""	"0"	"4.313E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEPLMLSCK"	"[R].iGEPLMLSck.[G]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"797.94275"	"1594.87822"	"1594.87710"	"0.70"	"0.00056"	"9/82"	"9"	"82"	"1629163.50115967"	"HCD"	"MS2"	"1.501353"	"146.2"	"100.000"	"66.3311"	"21485"	"21485"	"21465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.4"	""	"206.7"	""	"215.8"	""	"190.4"	""	"274.5"	"304.4"	""	"1020"	"38"	"37.000"	"30.000"	"0.00902755568741884"	""	"0"	"2.839E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDLFPSDFK"	"[R].aPDLFPSDFk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62916"	"Transcription initiation factor IIB OS=Rattus norvegicus OX=10116 GN=Gtf2b PE=2 SV=1"	"P62916"	"Transcription initiation factor IIB OS=Rattus norvegicus OX=10116 GN=Gtf2b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.94800"	"1594.88872"	"1594.88812"	"0.38"	"0.00030"	"6/82"	"6"	"82"	"487607.566833496"	"HCD"	"MS2"	"47.4934"	"34.2"	"100.000"	"59.9285"	"18871"	"18871"	"18841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.7"	""	"44.0"	""	"49.6"	""	"48.6"	"0.8"	"68.9"	"62.9"	""	"1035"	"3"	"37.000"	"30.000"	"28.4387402221321"	"13"	"0.008214"	"0.3499"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDLFPSDFK"	"[R].aPDLFPSDFk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62916"	"Transcription initiation factor IIB OS=Rattus norvegicus OX=10116 GN=Gtf2b PE=2 SV=1"	"P62916"	"Transcription initiation factor IIB OS=Rattus norvegicus OX=10116 GN=Gtf2b PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"797.94855"	"1594.88982"	"1594.88812"	"1.07"	"0.00085"	"7/82"	"7"	"82"	"488237.176330566"	"HCD"	"MS2"	"100"	"44.4"	"100.000"	"59.9815"	"18946"	"18946"	"18916"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.2"	""	"72.1"	""	"59.5"	""	"74.6"	""	"72.5"	"79.4"	""	"1019"	"9"	"37.000"	"30.000"	"6.50345573089381"	"15"	"0.001058"	"0.01378"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDAIVMDPK"	"[K].tFDAIVMDPk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"532.30151"	"1594.88999"	"1594.89149"	"-0.94"	"-0.00050"	"6/86"	"6"	"86"	"3457675.83239746"	"HCD"	"MS2"	"6.485741"	"121.2"	"100.000"	"54.5645"	"16683"	"16683"	"16656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.0"	""	"199.0"	""	"179.5"	""	"136.2"	""	"217.9"	"226.8"	""	"1020"	"17"	"37.000"	"30.000"	"0.923783447235997"	"16"	"0.0005564"	"0.003583"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDAIVMDPK"	"[K].tFDAIVMDPk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"797.94989"	"1594.89250"	"1594.89149"	"0.64"	"0.00051"	"7/86"	"7"	"86"	"1138459.17694092"	"HCD"	"MS2"	"22.12437"	"95.7"	"100.000"	"54.8375"	"16848"	"16848"	"16821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.3"	""	"139.7"	""	"156.7"	""	"90.0"	""	"183.1"	"182.2"	""	"1028"	"50"	"37.000"	"30.000"	"0.000484131252612741"	"26"	"7.476E-05"	"0.0002023"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDAIVMDPK"	"[K].tFDAIVMDPk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"532.30292"	"1594.89420"	"1594.89149"	"1.70"	"0.00090"	"5/86"	"5"	"86"	"3543643.90167236"	"HCD"	"MS2"	"13.24129"	"130.1"	"100.000"	"54.7961"	"16831"	"16831"	"16805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.5"	""	"208.5"	""	"199.6"	""	"139.3"	""	"241.0"	"236.3"	""	"1023"	"29"	"37.000"	"30.000"	"0.071096077086563"	"23"	"0.0003839"	"0.001651"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFPEPVTVK"	"[K].gYFPEPVTVk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"797.96259"	"1594.91789"	"1594.92450"	"-4.14"	"-0.00330"	"9/78"	"9"	"78"	"3274307.32244873"	"HCD"	"MS2"	"0"	"247.9"	"100.000"	"49.1673"	"14507"	"14507"	"14479"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.7"	""	"378.3"	""	"316.7"	""	"340.5"	""	"439.2"	"512.4"	""	"886"	"46"	"36.000"	"29.000"	"0.00101019153789619"	"24"	"0"	"6.876E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGISFPDPK"	"[R].iYGISFPDPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"797.96277"	"1594.91826"	"1594.92450"	"-3.91"	"-0.00312"	"5/78"	"5"	"78"	"3201054.5625"	"HCD"	"MS2"	"35.96452"	"206.0"	"100.000"	"61.8144"	"19694"	"19694"	"19667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"301.8"	""	"293.6"	""	"311.9"	""	"313.8"	""	"363.5"	"370.1"	""	"872"	"23"	"36.000"	"29.000"	"0.245180817782992"	"15"	"0.0002277"	"0.001143"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGISFPDPK"	"[R].iYGISFPDPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"797.96301"	"1594.91875"	"1594.92450"	"-3.61"	"-0.00288"	"8/78"	"8"	"78"	"2346101.53265381"	"HCD"	"MS2"	"48.29066"	"162.1"	"100.000"	"61.6438"	"19571"	"19571"	"19545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"242.2"	""	"223.8"	""	"244.9"	""	"246.4"	""	"282.4"	"295.6"	""	"876"	"41"	"36.000"	"29.000"	"0.00314393899576857"	"22"	"0.0001889"	"0.0005151"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFPEPVTVK"	"[K].gYFPEPVTVk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"797.96423"	"1594.92119"	"1594.92450"	"-2.08"	"-0.00166"	"13/78"	"13"	"78"	"3521093.68243408"	"HCD"	"MS2"	"5.577155"	"253.2"	"100.000"	"49.4949"	"14685"	"14685"	"14654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"354.9"	""	"401.6"	""	"344.5"	""	"363.1"	""	"446.5"	"488.6"	""	"821"	"41"	"36.000"	"29.000"	"0.00320858213783509"	"23"	"0"	"6.996E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGISFPDPK"	"[R].iYGISFPDPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"532.31256"	"1594.92313"	"1594.92450"	"-0.86"	"-0.00046"	"11/78"	"11"	"78"	"6226006.72412109"	"HCD"	"MS2"	"12.97789"	"127.0"	"100.000"	"61.6785"	"19585"	"19585"	"19561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.8"	""	"185.6"	""	"202.5"	""	"196.0"	""	"207.9"	"229.6"	""	"801"	"37"	"36.000"	"29.000"	"0.00793601573834941"	"16"	"0.0001308"	"0.0002875"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGISFPDPK"	"[R].iYGISFPDPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.31268"	"1594.92350"	"1594.92450"	"-0.63"	"-0.00034"	"9/78"	"9"	"78"	"4899605.9118042"	"HCD"	"MS2"	"14.97358"	"109.9"	"100.000"	"61.8121"	"19693"	"19693"	"19667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.1"	""	"162.7"	""	"160.3"	""	"168.9"	""	"205.1"	"195.4"	""	"810"	"24"	"36.000"	"29.000"	"0.164989012510666"	"14"	"0.0001889"	"0.0007259"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLmANGQLVk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"532.31775"	"1594.93869"	"1594.93911"	"-0.26"	"-0.00014"	"8/84"	"8"	"84"	"7234792.45483398"	"HCD"	"MS2"	"43.22378"	"283.5"	"100.000"	"47.6164"	"13872"	"13872"	"13848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"364.9"	""	"396.8"	""	"413.5"	""	"467.0"	""	"531.5"	"514.9"	""	"715"	"22"	"35.000"	"28.000"	"0.220940863049483"	"17"	"0.0001889"	"0.0008613"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLmANGQLVk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.97302"	"1594.93877"	"1594.93911"	"-0.21"	"-0.00017"	"15/84"	"15"	"84"	"2996961.44470215"	"HCD"	"MS2"	"0"	"209.6"	"100.000"	"47.5037"	"13826"	"13826"	"13800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"281.1"	""	"340.3"	""	"324.9"	""	"395.1"	""	"316.2"	"326.0"	""	"715"	"46"	"35.000"	"28.000"	"0.000836134312820718"	"15"	"0"	"0.0001654"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLmANGQLVk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"532.31805"	"1594.93961"	"1594.93911"	"0.32"	"0.00017"	"8/84"	"8"	"84"	"5989880.47967529"	"HCD"	"MS2"	"36.52544"	"233.2"	"100.000"	"47.9124"	"14041"	"14041"	"14018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.9"	""	"332.1"	""	"340.1"	""	"394.2"	"0.0"	"442.9"	"412.8"	""	"706"	"17"	"35.000"	"28.000"	"0.772279853254192"	"15"	"0.0001889"	"0.0008588"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLmANGQLVk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.97498"	"1594.94267"	"1594.93911"	"2.24"	"0.00178"	"15/84"	"15"	"84"	"2698283.73834229"	"HCD"	"MS2"	"0"	"184.4"	"100.000"	"47.7651"	"13981"	"13981"	"13954"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.4"	""	"284.7"	""	"295.3"	""	"358.3"	""	"262.3"	"273.2"	""	"717"	"48"	"35.000"	"28.000"	"0.000589507262772553"	"15"	"0"	"0.0001393"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPLGTELHK"	"[K].lEPLGTELHk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"532.32318"	"1594.95499"	"1594.95686"	"-1.17"	"-0.00062"	"7/82"	"7"	"82"	"11841445.3981323"	"HCD"	"MS2"	"24.9132"	"369.6"	"100.000"	"40.6437"	"11082"	"11082"	"11053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"480.6"	""	"463.3"	""	"451.7"	""	"556.5"	"4.0"	"785.5"	"768.4"	""	"592"	"38"	"34.000"	"27.000"	"0.00484497690342632"	"19"	"0"	"1.129E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPLGTELHK"	"[K].lEPLGTELHk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"532.32355"	"1594.95609"	"1594.95686"	"-0.49"	"-0.00026"	"7/82"	"7"	"82"	"10982643.9630737"	"HCD"	"MS2"	"16.73854"	"348.6"	"100.000"	"40.4879"	"10974"	"10974"	"10949"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"424.7"	""	"452.9"	""	"440.5"	""	"522.9"	"3.1"	"716.8"	"749.3"	""	"577"	"38"	"34.000"	"27.000"	"0.00482109642228639"	"19"	"0"	"2.068E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLEYIQPK"	"[K].vFLEYIQPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P7A2"	"Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1"	"Q6P7A2"	"Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"532.32489"	"1594.96012"	"1594.96089"	"-0.48"	"-0.00026"	"6/68"	"6"	"68"	"2338677.65899658"	"HCD"	"MS2"	"5.52908"	"74.7"	"100.000"	"65.3740"	"21095"	"21095"	"21065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.1"	""	"90.0"	""	"98.2"	""	"113.6"	""	"144.6"	"159.8"	""	"560"	"26"	"34.000"	"27.000"	"0.0771184036934685"	"15"	"0.0006037"	"0.00492"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQPTIFPVVPR"	"[K].vLQPTIFPVVPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"0.1923"	"0.0000"	"1"	"1"	"1"	"532.33398"	"1594.98740"	"1594.98821"	"-0.51"	"-0.00027"	"15/106"	"15"	"106"	"4607737.32403564"	"HCD"	"MS2"	"4.720213"	"44.1"	"100.000"	"65.7004"	"21281"	"21281"	"21251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.8"	""	"70.0"	""	"58.0"	""	"49.1"	"2.0"	"77.3"	"85.5"	""	"418"	"52"	"33.000"	"26.000"	"0.000142280795966992"	""	"0"	"2.215E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQPTIFPVVPR"	"[K].vLQPTIFPVVPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"0.2105"	"0.0000"	"1"	"1"	"1"	"532.33405"	"1594.98758"	"1594.98821"	"-0.40"	"-0.00021"	"8/106"	"8"	"106"	"4647574.78540039"	"HCD"	"MS2"	"5.504565"	"59.0"	"100.000"	"65.7639"	"21254"	"21254"	"21225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.4"	""	"83.7"	""	"90.2"	""	"74.6"	"1.2"	"107.1"	"97.1"	""	"418"	"38"	"33.000"	"26.000"	"0.00319997279491544"	""	"0"	"0.0001115"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQPTIFPVVPR"	"[K].vLQPTIFPVVPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.1765"	"0.0000"	"1"	"1"	"1"	"797.99780"	"1594.98833"	"1594.98821"	"0.07"	"0.00006"	"10/106"	"10"	"106"	"2370866.84283447"	"HCD"	"MS2"	"14.73069"	"81.0"	"100.000"	"65.7132"	"21233"	"21233"	"21209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.3"	""	"116.6"	""	"119.1"	""	"93.5"	"0.5"	"126.2"	"139.8"	""	"417"	"34"	"33.000"	"26.000"	"0.00796353804701496"	""	"0"	"8.178E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQPTIFPVVPR"	"[K].vLQPTIFPVVPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.2581"	"0.0000"	"1"	"1"	"1"	"797.99805"	"1594.98882"	"1594.98821"	"0.38"	"0.00030"	"10/106"	"10"	"106"	"2607188.46929932"	"HCD"	"MS2"	"36.04264"	"104.1"	"100.000"	"65.6567"	"21263"	"21263"	"21235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.0"	""	"162.6"	""	"154.8"	""	"133.8"	""	"153.6"	"171.2"	""	"384"	"31"	"32.000"	"25.000"	"0.0153922188170434"	""	"0.0001889"	"0.0007385"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFYSLEMPIR"	"[K].nPFYSLEMPIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"798.42615"	"1595.84502"	"1595.84532"	"-0.19"	"-0.00015"	"8/104"	"8"	"104"	"798570.588134766"	"HCD"	"MS2"	"19.06869"	"51.6"	"100.000"	"64.7183"	"20880"	"20880"	"20851"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.1"	""	"62.2"	""	"76.6"	""	"69.3"	""	"99.2"	"109.0"	""	"970"	"34"	"36.000"	"29.000"	"0.0185670000508659"	"15"	"0"	"2.912E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFYSLEMPIR"	"[K].nPFYSLEMPIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"798.42657"	"1595.84587"	"1595.84532"	"0.35"	"0.00028"	"16/104"	"16"	"104"	"953041.438537598"	"HCD"	"MS2"	"50.49707"	"62.4"	"100.000"	"64.7494"	"20840"	"20840"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.4"	""	"85.6"	""	"87.8"	""	"82.0"	""	"116.6"	"131.4"	""	"974"	"17"	"36.000"	"29.000"	"0.949574320082168"	"15"	"0"	"0.0001601"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].sSGSLLNNAmk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"798.44415"	"1595.88103"	"1595.88271"	"-1.06"	"-0.00084"	"18/94"	"18"	"94"	"582032.983520508"	"HCD"	"MS2"	"0"	"46.0"	"100.000"	"33.6325"	"8169"	"8169"	"8147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.5"	""	"71.6"	""	"67.4"	""	"93.5"	"1.4"	"52.6"	"51.1"	""	"952"	"51"	"36.000"	"29.000"	"0.000344038426514633"	"22"	"0"	"0.0001722"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].sSGSLLNNAmk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"798.44434"	"1595.88140"	"1595.88271"	"-0.83"	"-0.00066"	"10/94"	"10"	"94"	"604535.414001465"	"HCD"	"MS2"	"0"	"45.4"	"100.000"	"33.6831"	"8233"	"8233"	"8210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.4"	""	"74.1"	""	"60.8"	""	"96.0"	""	"50.6"	"54.7"	""	"948"	"54"	"36.000"	"29.000"	"0.000200806765907483"	"24"	"7.476E-05"	"0.000196"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITQGESCLK"	"[R].lITQGEScLk.[A]"	"N-Term(TMT6plex); C8(Methylthio); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"798.44653"	"1595.88579"	"1595.89011"	"-2.70"	"-0.00216"	"16/92"	"16"	"92"	"3260864.23913574"	"HCD"	"MS2"	"27.45028"	"287.2"	"100.000"	"51.6152"	"15498"	"15498"	"15474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"679.3"	""	"504.8"	""	"301.9"	""	"381.1"	""	"416.4"	"430.2"	""	"950"	"56"	"36.000"	"29.000"	"0.000125803756583818"	"19"	"0"	"4.327E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITQGESCLK"	"[R].lITQGEScLk.[A]"	"N-Term(TMT6plex); C8(Methylthio); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"532.63446"	"1595.88883"	"1595.89011"	"-0.80"	"-0.00043"	"11/92"	"11"	"92"	"3566018.88006592"	"HCD"	"MS2"	"57.70606"	"153.1"	"100.000"	"51.8657"	"15651"	"15651"	"15622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.7"	""	"248.7"	""	"222.7"	""	"189.0"	"0.4"	"240.3"	"255.8"	""	"962"	"33"	"36.000"	"29.000"	"0.0251851809997746"	"16"	"0"	"0.000156"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITQGESCLK"	"[R].lITQGEScLk.[A]"	"N-Term(TMT6plex); C8(Methylthio); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"798.44818"	"1595.88909"	"1595.89011"	"-0.64"	"-0.00051"	"9/92"	"9"	"92"	"3234425.16186523"	"HCD"	"MS2"	"13.4155"	"270.2"	"100.000"	"51.8033"	"15625"	"15625"	"15606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"621.7"	""	"455.2"	""	"286.9"	""	"391.9"	""	"400.7"	"393.2"	""	"964"	"48"	"36.000"	"29.000"	"0.000807322466244744"	"22"	"0"	"6.551E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITQGESCLK"	"[R].lITQGEScLk.[A]"	"N-Term(TMT6plex); C8(Methylthio); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"532.63513"	"1595.89084"	"1595.89011"	"0.46"	"0.00025"	"7/92"	"7"	"92"	"2776596.41699219"	"HCD"	"MS2"	"48.12703"	"125.7"	"100.000"	"51.7048"	"15535"	"15535"	"15506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.9"	""	"200.2"	""	"174.6"	""	"161.7"	""	"226.4"	"216.1"	""	"969"	"44"	"36.000"	"29.000"	"0.00180423781680338"	"24"	"0"	"9.601E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQASVGNSYK"	"[K].aLQASVGNSYk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"798.46161"	"1595.91594"	"1595.91573"	"0.13"	"0.00011"	"17/104"	"17"	"104"	"982377.243041992"	"HCD"	"MS2"	"5.860949"	"95.7"	"100.000"	"35.7492"	"9033"	"9033"	"9003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.2"	""	"130.2"	""	"134.1"	""	"145.0"	"0.8"	"163.8"	"181.0"	""	"870"	"66"	"36.000"	"29.000"	"1.07767859507048E-05"	"19"	"0"	"3.253E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLmAnGQLVk.[M]"	"N-Term(TMT6plex); M3(Oxidation); N5(Deamidated); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"798.46466"	"1595.92204"	"1595.92312"	"-0.67"	"-0.00054"	"8/84"	"8"	"84"	"1076978.55041504"	"HCD"	"MS2"	"0"	"98.3"	"100.000"	"52.0130"	"15661"	"15661"	"15634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.6"	""	"170.7"	""	"163.3"	""	"130.6"	""	"146.1"	"167.6"	""	"835"	"12"	"36.000"	"29.000"	"2.48116976222002"	"19"	"0.003788"	"0.08873"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLmAnGQLVk.[M]"	"N-Term(TMT6plex); M3(Oxidation); N5(Deamidated); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.3590"	"0.0000"	"1"	"1"	"1"	"532.64557"	"1595.92215"	"1595.92312"	"-0.61"	"-0.00032"	"7/84"	"7"	"84"	"5486956.31170654"	"HCD"	"MS2"	"26.49993"	"172.3"	"100.000"	"51.5387"	"15517"	"15517"	"15494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.6"	""	"229.3"	""	"211.3"	""	"328.9"	"2.3"	"321.1"	"297.7"	""	"835"	"39"	"36.000"	"29.000"	"0.00518389838419832"	"22"	"0"	"5.804E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLmAnGQLVk.[M]"	"N-Term(TMT6plex); M3(Oxidation); N5(Deamidated); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.2245"	"0.0000"	"1"	"1"	"1"	"798.46484"	"1595.92241"	"1595.92312"	"-0.45"	"-0.00036"	"8/84"	"8"	"84"	"2577462.75524902"	"HCD"	"MS2"	"0"	"181.4"	"100.000"	"51.2583"	"15352"	"15352"	"15330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.4"	""	"194.3"	""	"209.8"	""	"432.1"	"1.0"	"336.3"	"310.1"	""	"839"	"49"	"36.000"	"29.000"	"0.000583085128794002"	"16"	"0.0001308"	"0.0002816"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLmAnGQLVk.[M]"	"N-Term(TMT6plex); M3(Oxidation); N5(Deamidated); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"798.46533"	"1595.92339"	"1595.92312"	"0.17"	"0.00013"	"9/84"	"9"	"84"	"3238084.94055176"	"HCD"	"MS2"	"0"	"209.7"	"100.000"	"51.5110"	"15506"	"15506"	"15478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"283.8"	""	"245.5"	""	"250.0"	""	"450.5"	"2.9"	"392.3"	"362.5"	""	"819"	"44"	"36.000"	"29.000"	"0.00181657739689921"	"15"	"0"	"0.0001384"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLMANGQLVK"	"[K].fLmAnGQLVk.[M]"	"N-Term(TMT6plex); M3(Oxidation); N5(Deamidated); K10(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"532.64606"	"1595.92362"	"1595.92312"	"0.31"	"0.00017"	"9/84"	"9"	"84"	"4103790.88195801"	"HCD"	"MS2"	"4.927628"	"149.9"	"100.000"	"51.4240"	"15420"	"15420"	"15394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.0"	""	"185.8"	""	"200.1"	""	"274.5"	""	"285.9"	"273.0"	""	"807"	"22"	"36.000"	"29.000"	"0.229004248282349"	"23"	"0.0001308"	"0.000285"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLEYIQPK"	"[K].vFLEYIqPk.[D]"	"N-Term(TMT6plex); Q7(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q6P7A2"	"Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1"	"Q6P7A2"	"Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"532.66107"	"1595.96866"	"1595.94490"	"14.89"	"0.00792"	"5/68"	"5"	"68"	"2523535.30664063"	"HCD"	"MS2"	"35.45696"	"85.5"	"100.000"	"65.3249"	"21127"	"21127"	"21107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.5"	""	"111.1"	""	"103.2"	""	"134.9"	""	"176.5"	"202.0"	""	"488"	"17"	"33.000"	"26.000"	"0.489091174677099"	"17"	"0.004913"	"0.1461"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLTGPIIPK"	"[R].lADLTGPIIPk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70567"	"Tropomodulin-1 OS=Rattus norvegicus OX=10116 GN=Tmod1 PE=2 SV=1"	"P70567"	"Tropomodulin-1 OS=Rattus norvegicus OX=10116 GN=Tmod1 PE=2 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"798.51050"	"1596.01372"	"1596.01365"	"0.04"	"0.00003"	"11/84"	"11"	"84"	"717136.6875"	"HCD"	"MS2"	"41.77147"	"50.8"	"100.000"	"63.3390"	"20264"	"20264"	"20233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.5"	""	"56.8"	""	"67.0"	""	"86.6"	""	"103.1"	"108.3"	""	"237"	"38"	"30.000"	"23.000"	"0.00204041426135842"	"22"	"0.0001859"	"0.0003167"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLTGPIIPK"	"[R].lADLTGPIIPk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70567"	"Tropomodulin-1 OS=Rattus norvegicus OX=10116 GN=Tmod1 PE=2 SV=1"	"P70567"	"Tropomodulin-1 OS=Rattus norvegicus OX=10116 GN=Tmod1 PE=2 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"532.67645"	"1596.01480"	"1596.01365"	"0.72"	"0.00038"	"7/84"	"7"	"84"	"1633694.44805908"	"HCD"	"MS2"	"53.81405"	"65.3"	"100.000"	"63.3367"	"20263"	"20263"	"20233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.2"	""	"81.4"	""	"77.9"	""	"103.3"	""	"143.7"	"134.2"	""	"236"	"22"	"30.000"	"23.000"	"0.0797777910962539"	"18"	"0.0001889"	"0.001019"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THKNPALK"	"[K].tHkNPALk.[A]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.67761"	"1596.01828"	"1596.02002"	"-1.09"	"-0.00058"	"6/66"	"6"	"66"	"4378765.37548828"	"HCD"	"MS2"	"8.14153"	"283.5"	"100.000"	"24.2122"	"4412"	"4412"	"4381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"605.1"	""	"571.1"	""	"547.2"	""	"294.5"	""	"352.7"	"298.3"	""	"221"	"3"	"30.000"	"23.000"	"5.58936251513441"	"13"	"0.0003146"	"0.001438"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THKNPALK"	"[K].tHkNPALk.[A]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"399.76010"	"1596.01858"	"1596.02002"	"-0.91"	"-0.00036"	"4/66"	"4"	"66"	"13661858.8693848"	"HCD"	"MS2"	"5.953947"	"555.6"	"91.669"	"24.2626"	"4432"	"4432"	"4413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1207.1"	""	"1067.5"	""	"1093.3"	""	"529.3"	"0.8"	"743.3"	"585.6"	""	"221"	"9"	"30.000"	"23.000"	"1.30125460074049"	"13"	"0.0006037"	"0.00496"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THKNPALK"	"[K].tHkNPALk.[A]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.67786"	"1596.01902"	"1596.02002"	"-0.63"	"-0.00034"	"7/66"	"7"	"66"	"5446121.39666748"	"HCD"	"MS2"	"7.506482"	"308.4"	"100.000"	"24.1897"	"4369"	"4369"	"4342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"719.6"	""	"593.0"	""	"628.1"	""	"282.6"	""	"386.0"	"299.8"	""	"217"	"10"	"30.000"	"23.000"	"1.01725477751458"	"13"	"0.0001889"	"0.000583"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSIMGGSIDGLR"	"[R].vYSIMGGSIDGLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"798.93317"	"1596.85906"	"1596.86169"	"-1.65"	"-0.00132"	"10/110"	"10"	"110"	"2076207.1696167"	"HCD"	"MS2"	"21.28457"	"105.9"	"100.000"	"58.7112"	"18428"	"18428"	"18405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.1"	""	"175.6"	""	"176.7"	""	"117.5"	"1.5"	"172.5"	"197.1"	""	"977"	"60"	"36.000"	"29.000"	"4.76282438024943E-05"	"17"	"0"	"1.17E-06"	"1.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSIMGGSIDGLR"	"[R].vYSIMGGSIDGLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.9836"	"0.0000"	"1"	"1"	"1"	"798.93365"	"1596.86003"	"1596.86169"	"-1.04"	"-0.00083"	"11/110"	"11"	"110"	"2067389.49725342"	"HCD"	"MS2"	"15.39577"	"108.1"	"100.000"	"58.5623"	"18317"	"18317"	"18297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.9"	""	"178.5"	""	"170.0"	""	"120.9"	"1.1"	"177.9"	"189.5"	""	"973"	"61"	"36.000"	"29.000"	"4.20806892484374E-05"	"17"	"0"	"6.292E-07"	"1.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NWFSETLNK"	"[R].nWFSETLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"798.94275"	"1596.87822"	"1596.87861"	"-0.25"	"-0.00020"	"14/84"	"14"	"84"	"2411169.68261719"	"HCD"	"MS2"	"0"	"227.1"	"100.000"	"55.2471"	"16962"	"16962"	"16939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.4"	""	"349.2"	""	"298.4"	""	"356.5"	"0.3"	"340.0"	"450.8"	""	"972"	"39"	"36.000"	"29.000"	"0.00559288989026996"	"19"	"0"	"0.0001012"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NWFSETLNK"	"[R].nWFSETLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"532.96448"	"1596.87888"	"1596.87861"	"0.17"	"0.00009"	"10/84"	"10"	"84"	"7956792.92523193"	"HCD"	"MS2"	"16.39623"	"221.0"	"100.000"	"55.5265"	"17130"	"17130"	"17109"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"337.8"	""	"329.9"	""	"303.4"	""	"356.3"	""	"324.0"	"441.4"	""	"980"	"39"	"36.000"	"29.000"	"0.00589109572962532"	"24"	"0.0001889"	"0.00057"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NWFSETLNK"	"[R].nWFSETLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"798.94336"	"1596.87944"	"1596.87861"	"0.52"	"0.00041"	"8/84"	"8"	"84"	"3547570.51452637"	"HCD"	"MS2"	"9.679804"	"320.4"	"100.000"	"55.4855"	"17113"	"17113"	"17093"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"472.9"	""	"470.6"	""	"451.8"	""	"481.5"	""	"487.3"	"668.4"	""	"984"	"50"	"36.000"	"29.000"	"0.000489739465336951"	"24"	"0.0001308"	"0.0002138"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NWFSETLNK"	"[R].nWFSETLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"532.96490"	"1596.88016"	"1596.87861"	"0.97"	"0.00052"	"10/84"	"10"	"84"	"6467958.43603516"	"HCD"	"MS2"	"10.63198"	"194.5"	"100.000"	"55.2885"	"16979"	"16979"	"16955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"293.9"	""	"296.7"	""	"258.8"	""	"318.4"	""	"291.0"	"382.0"	""	"970"	"34"	"36.000"	"29.000"	"0.019131179150651"	"25"	"0.0001889"	"0.001025"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYRPGSVAYVSR"	"[K].lYRPGSVAYVSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.97253"	"1596.90305"	"1596.90594"	"-1.81"	"-0.00096"	"9/116"	"9"	"116"	"22198723.6051025"	"HCD"	"MS2"	"7.547367"	"284.4"	"42.991"	"33.9237"	"8287"	"8287"	"8272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"444.1"	""	"395.9"	""	"440.6"	""	"442.6"	"5.1"	"457.0"	"504.2"	""	"844"	"28"	"36.000"	"29.000"	"0.0664220768804745"	"14"	"0"	"0.0001326"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVAAASKPAVEIK"	"[K].iAVAAASKPAVEIK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P51673"	"Cellular retinoic acid-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Crabp2 PE=2 SV=2"	"P51673"	"Cellular retinoic acid-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Crabp2 PE=2 SV=2"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"532.99896"	"1596.98233"	"1596.98861"	"-3.93"	"-0.00209"	"5/126"	"5"	"126"	"90936962.111084"	"HCD"	"MS2"	"21.54075"	"736.6"	"29.952"	"35.2288"	"8862"	"8862"	"8842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1263.8"	""	"1053.4"	""	"1045.3"	""	"1135.6"	""	"1242.4"	"1225.4"	""	"420"	"15"	"33.000"	"26.000"	"0.698585061917408"	"23"	"0.006001"	"0.2081"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVAAASKPAVEIK"	"[K].iAVAAASKPAVEIK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P51673"	"Cellular retinoic acid-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Crabp2 PE=2 SV=2"	"P51673"	"Cellular retinoic acid-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Crabp2 PE=2 SV=2"	"0"	"3"	"3"	"0.0909"	"0.0000"	"1"	"1"	"1"	"532.99921"	"1596.98307"	"1596.98861"	"-3.47"	"-0.00185"	"5/126"	"5"	"126"	"67432549.2491455"	"HCD"	"MS2"	"18.11865"	"906.4"	"44.089"	"35.1779"	"8798"	"8798"	"8779"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1580.8"	""	"1320.3"	""	"1262.0"	""	"1401.2"	""	"1516.2"	"1489.9"	""	"422"	"11"	"33.000"	"26.000"	"1.75906729954743"	"23"	"0.003788"	"0.09261"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFPTSTTK"	"[K].kFPTSTTk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q10728"	"Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus OX=10116 GN=Ppp1r12a PE=1 SV=2"	"Q10728"	"Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus OX=10116 GN=Ppp1r12a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.00195"	"1596.99131"	"1596.99280"	"-0.94"	"-0.00050"	"6/76"	"6"	"76"	"4609823.65167236"	"HCD"	"MS2"	"16.87181"	"327.0"	"100.000"	"30.6195"	"6986"	"6986"	"6960"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"404.9"	"3.0"	"384.9"	""	"419.2"	""	"581.0"	""	"668.7"	"651.6"	""	"355"	"19"	"32.000"	"25.000"	"0.216370653809164"	"14"	"0.0001889"	"0.0004921"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFPTSTTK"	"[K].kFPTSTTk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q10728"	"Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus OX=10116 GN=Ppp1r12a PE=1 SV=2"	"Q10728"	"Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus OX=10116 GN=Ppp1r12a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.00214"	"1596.99186"	"1596.99280"	"-0.59"	"-0.00032"	"6/76"	"6"	"76"	"8208840.36224365"	"HCD"	"MS2"	"17.7701"	"474.9"	"100.000"	"30.4678"	"6883"	"6883"	"6858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"544.5"	""	"569.7"	""	"600.3"	""	"914.5"	""	"953.1"	"926.5"	""	"342"	"15"	"32.000"	"25.000"	"0.494306259884496"	"13"	"0.0001889"	"0.0008774"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"533.27948"	"1597.82389"	"1597.82458"	"-0.43"	"-0.00023"	"11/96"	"11"	"96"	"1603697.784729"	"HCD"	"MS2"	"4.740734"	"33.9"	"100.000"	"60.6506"	"19165"	"19165"	"19145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.5"	""	"50.9"	""	"49.0"	""	"48.6"	"1.5"	"62.9"	"61.0"	""	"868"	"46"	"36.000"	"29.000"	"0.00101974064424817"	""	"0"	"0.0001591"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"799.41583"	"1597.82439"	"1597.82458"	"-0.12"	"-0.00010"	"8/96"	"8"	"96"	"2319855.77593994"	"HCD"	"MS2"	"7.603409"	"123.2"	"100.000"	"60.5903"	"19141"	"19141"	"19113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"202.0"	""	"180.3"	""	"185.4"	""	"134.5"	"0.1"	"229.4"	"235.4"	""	"861"	"48"	"36.000"	"29.000"	"0.000672935060156931"	""	"0"	"6.574E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"799.41614"	"1597.82500"	"1597.82458"	"0.26"	"0.00021"	"6/96"	"6"	"96"	"2127698.25280762"	"HCD"	"MS2"	"0"	"115.8"	"100.000"	"60.7216"	"19248"	"19248"	"19219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.6"	""	"161.6"	""	"181.1"	""	"131.7"	""	"204.1"	"221.6"	""	"879"	"43"	"36.000"	"29.000"	"0.00208429352521877"	""	"0"	"7.802E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.5806"	"0.0000"	"1"	"1"	"1"	"533.28003"	"1597.82553"	"1597.82458"	"0.60"	"0.00032"	"13/96"	"13"	"96"	"1677406.23736572"	"HCD"	"MS2"	"16.54701"	"33.3"	"100.000"	"60.8022"	"19281"	"19281"	"19251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.0"	""	"50.4"	""	"43.1"	""	"45.3"	"0.3"	"55.2"	"67.9"	""	"879"	"31"	"36.000"	"29.000"	"0.0351527155075589"	"27"	"0"	"0.0001527"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MISGMYLGEIVR"	"[K].mISGMYLGEIVR.[HN]"	"N-Term(TMT6plex)"	"2"	"3"	"P27926; P05708"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1;Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P27926; P05708; P27881"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1; Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4; Hexokinase-2 OS=Rattus norvegicus OX=10116 GN=Hk2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.43628"	"1597.86528"	"1597.86434"	"0.59"	"0.00047"	"9/100"	"9"	"100"	"806268.614196777"	"HCD"	"MS2"	"0"	"59.0"	"100.000"	"64.9970"	"20994"	"20994"	"20963"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.0"	""	"90.5"	""	"81.5"	""	"69.9"	""	"106.2"	"129.1"	""	"881"	"39"	"36.000"	"29.000"	"0.00543182679037334"	"15"	"0"	"8.545E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISLETYNLFR"	"[R].iISLETYNLFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.30048"	"1597.88687"	"1597.91511"	"-17.67"	"-0.00941"	"10/92"	"10"	"92"	"556227.473388672"	"HCD"	"MS2"	"42.6338"	"18.6"	"100.000"	"75.8166"	"25401"	"25401"	"25375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.9"	""	"19.4"	""	"28.0"	""	"33.6"	"1.1"	"36.3"	"36.4"	""	"848"	"24"	"36.000"	"29.000"	"0.169186558601548"	"14"	"0.0001889"	"0.000989"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISLETYNLFR"	"[R].iISLETYNLFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.30103"	"1597.88852"	"1597.91511"	"-16.64"	"-0.00886"	"11/92"	"11"	"92"	"1274891.20507813"	"HCD"	"MS2"	"16.31899"	"29.9"	"100.000"	"75.7436"	"25319"	"25319"	"25297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.1"	""	"42.0"	""	"38.3"	""	"55.1"	""	"53.4"	"60.4"	""	"857"	"18"	"36.000"	"29.000"	"0.69815334998612"	"14"	"0.0003839"	"0.001943"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISLETYNLFR"	"[R].iISLETYNLFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"799.46069"	"1597.91411"	"1597.91511"	"-0.63"	"-0.00050"	"7/92"	"7"	"92"	"322526.140380859"	"HCD"	"MS2"	"8.673797"	"19.5"	"100.000"	"75.8590"	"25366"	"25366"	"25345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.8"	""	"35.9"	""	"33.7"	""	"28.2"	""	"30.0"	"33.2"	""	"707"	"49"	"35.000"	"28.000"	"0.000452261291019685"	"17"	"0"	"0.0001404"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISLETYNLFR"	"[R].iISLETYNLFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9636"	"0.0000"	"1"	"1"	"1"	"799.46069"	"1597.91411"	"1597.91511"	"-0.63"	"-0.00050"	"8/92"	"8"	"92"	"974029.675292969"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"75.5305"	"25284"	"25284"	"25263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.7"	""	"90.7"	""	"87.0"	""	"64.0"	""	"75.2"	"99.4"	""	"707"	"55"	"35.000"	"28.000"	"0.000109241943539355"	"18"	"0"	"8.423E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISLETYNLFR"	"[R].iISLETYNLFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"799.46228"	"1597.91728"	"1597.91511"	"1.36"	"0.00109"	"8/92"	"8"	"92"	"989738.139831543"	"HCD"	"MS2"	"0"	"55.2"	"100.000"	"75.5564"	"25243"	"25243"	"25217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.9"	""	"104.6"	""	"102.2"	""	"64.9"	"1.5"	"73.1"	"97.7"	""	"734"	"53"	"35.000"	"28.000"	"0.000192604337911667"	"23"	"0"	"2.208E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTALLLPGIIK"	"[R].tTALLLPGIIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"533.35938"	"1598.06357"	"1598.06569"	"-1.32"	"-0.00070"	"12/82"	"12"	"82"	"5601373.44775391"	"HCD"	"MS2"	"0"	"102.1"	"100.000"	"69.5551"	"22845"	"22845"	"22826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.1"	""	"157.0"	""	"172.8"	""	"151.4"	"2.8"	"171.7"	"187.5"	""	"63"	"44"	"24.000"	"17.000"	"0.000135615882304889"	""	"0.0001889"	"0.000631"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTALLLPGIIK"	"[R].tTALLLPGIIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"533.35999"	"1598.06540"	"1598.06569"	"-0.18"	"-0.00009"	"10/82"	"10"	"82"	"6950119.36230469"	"HCD"	"MS2"	"5.584229"	"132.2"	"100.000"	"69.6492"	"22832"	"22832"	"22810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.0"	""	"199.9"	""	"202.2"	""	"195.5"	"0.3"	"219.0"	"245.7"	""	"65"	"34"	"25.000"	"18.000"	"0.00140891035475947"	""	"0.0001308"	"0.0002619"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMVSILSSFESR"	"[K].nMVSILSSFESR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"533.61798"	"1598.83939"	"1598.84096"	"-0.98"	"-0.00052"	"13/124"	"13"	"124"	"1044383.18115234"	"HCD"	"MS2"	"15.94303"	"34.9"	"100.000"	"69.8944"	"22984"	"22984"	"22959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.3"	""	"45.4"	""	"49.3"	""	"55.2"	"1.0"	"65.5"	"66.4"	""	"902"	"20"	"36.000"	"29.000"	"0.437699995227716"	"15"	"0.0001859"	"0.0003435"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMVSILSSFESR"	"[K].nMVSILSSFESR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"799.92444"	"1598.84160"	"1598.84096"	"0.40"	"0.00032"	"6/124"	"6"	"124"	"624374.696289063"	"HCD"	"MS2"	"0"	"41.6"	"100.000"	"69.8852"	"22980"	"22980"	"22959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.9"	""	"61.5"	""	"53.6"	""	"61.6"	"0.2"	"82.1"	"83.8"	""	"887"	"41"	"36.000"	"29.000"	"0.0033798204094627"	"21"	"0"	"6.244E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMVSILSSFESR"	"[K].nMVSILSSFESR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"799.92480"	"1598.84233"	"1598.84096"	"0.86"	"0.00069"	"7/124"	"7"	"124"	"617194.272399902"	"HCD"	"MS2"	"18.24475"	"46.0"	"100.000"	"70.0390"	"22991"	"22991"	"22966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.0"	""	"59.2"	""	"73.4"	""	"80.2"	""	"84.2"	"90.9"	""	"918"	"52"	"36.000"	"29.000"	"0.000309608364713346"	"21"	"0"	"0.0001824"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEYLGSMAK"	"[R].lEEYLGSMAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"799.94531"	"1598.88335"	"1598.88640"	"-1.91"	"-0.00153"	"7/82"	"7"	"82"	"688661.718811035"	"HCD"	"MS2"	"18.56425"	"71.4"	"100.000"	"59.0544"	"18514"	"18514"	"18489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.7"	""	"98.9"	""	"96.3"	""	"103.6"	""	"133.4"	"148.9"	""	"878"	"13"	"36.000"	"29.000"	"2.14025007155387"	"17"	"0.0001889"	"0.0008525"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPLTTESAMK"	"[K].fPLTTESAmk.[K]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"799.94727"	"1598.88725"	"1598.88640"	"0.53"	"0.00043"	"9/78"	"9"	"78"	"999726.15423584"	"HCD"	"MS2"	"0"	"68.7"	"100.000"	"42.2810"	"11706"	"11706"	"11676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.3"	""	"76.4"	""	"84.0"	""	"198.3"	""	"116.9"	"102.7"	""	"875"	"48"	"36.000"	"29.000"	"0.000654603099541314"	"24"	"0.0001859"	"0.0003252"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPLTTESAMK"	"[K].fPLTTESAmk.[K]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"799.94733"	"1598.88738"	"1598.88640"	"0.61"	"0.00049"	"7/78"	"7"	"78"	"1027323.35070801"	"HCD"	"MS2"	"0"	"73.2"	"100.000"	"42.4963"	"11838"	"11838"	"11811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.4"	""	"78.1"	""	"95.7"	""	"201.5"	""	"131.4"	"104.1"	""	"874"	"51"	"36.000"	"29.000"	"0.000371947322694438"	"24"	"0.0001859"	"0.0003537"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEYLGSMAK"	"[R].lEEYLGSMAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"799.94830"	"1598.88933"	"1598.88640"	"1.83"	"0.00146"	"7/82"	"7"	"82"	"787726.324523926"	"HCD"	"MS2"	"47.45318"	"71.5"	"100.000"	"59.0856"	"18580"	"18580"	"18549"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.3"	""	"104.2"	""	"94.1"	""	"114.8"	"2.5"	"136.1"	"125.6"	""	"889"	"30"	"36.000"	"29.000"	"0.0405388818093702"	"22"	"0"	"7.393E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAANLLNDALAIR"	"[K].dAANLLNDALAIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"799.95642"	"1598.90557"	"1598.90634"	"-0.48"	"-0.00039"	"8/128"	"8"	"128"	"361227.346862793"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"68.1170"	"22258"	"22258"	"22234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.1"	""	"33.4"	""	"38.8"	""	"46.6"	""	"58.8"	"44.4"	""	"874"	"49"	"36.000"	"29.000"	"0.000584092240730795"	"22"	"0"	"0.000146"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALLELWELRR"	"[R].aALLELWELRR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.5610"	"0.0000"	"1"	"1"	"1"	"533.65674"	"1598.95566"	"1598.95798"	"-1.45"	"-0.00077"	"7/88"	"7"	"88"	"1580353.46539307"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"63.9224"	"20502"	"20502"	"20473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.7"	""	"84.3"	""	"76.0"	""	"56.9"	""	"63.8"	"69.0"	""	"602"	"41"	"34.000"	"27.000"	"0.0026216004057678"	""	"0.0001308"	"0.0002551"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALLELWELRR"	"[R].aALLELWELRR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.4878"	"0.0000"	"1"	"1"	"1"	"533.65765"	"1598.95841"	"1598.95798"	"0.27"	"0.00014"	"8/88"	"8"	"88"	"1953165.82000732"	"HCD"	"MS2"	"17.75161"	"53.1"	"100.000"	"63.9300"	"20558"	"20558"	"20531"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.3"	""	"106.9"	""	"88.6"	""	"65.4"	""	"66.3"	"66.9"	""	"596"	"41"	"34.000"	"27.000"	"0.00234000219113802"	""	"0.0001308"	"0.0002887"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVQHSNAK"	"[K].kVQHSNAk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.66882"	"1598.99192"	"1598.99454"	"-1.64"	"-0.00087"	"11/70"	"11"	"70"	"471347.933410645"	"HCD"	"MS2"	"34.64714"	"29.7"	"100.000"	"20.1244"	"2815"	"2815"	"2808"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.5"	""	"38.9"	""	"34.8"	""	"50.2"	""	"53.3"	"55.7"	""	"333"	"7"	"32.000"	"25.000"	"3.1725920954088"	"13"	"0.0001889"	"0.0006788"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVQHSNAK"	"[K].kVQHSNAk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.66919"	"1598.99302"	"1598.99454"	"-0.95"	"-0.00051"	"11/70"	"11"	"70"	"756652.147216797"	"HCD"	"MS2"	"0"	"48.7"	"100.000"	"20.1185"	"2782"	"2782"	"2777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.8"	""	"63.1"	""	"56.0"	""	"76.0"	""	"92.1"	"91.8"	""	"344"	"19"	"32.000"	"25.000"	"0.212582958552456"	"14"	"0.0001308"	"0.0002623"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVQHSNAK"	"[K].kVQHSNAk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.66937"	"1598.99356"	"1598.99454"	"-0.61"	"-0.00032"	"7/70"	"7"	"70"	"324729.815124512"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"19.8422"	"2731"	"2731"	"2727"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.6"	""	"30.6"	""	"23.4"	""	"35.5"	""	"39.3"	"42.3"	""	"339"	"8"	"32.000"	"25.000"	"2.56548631609937"	"13"	"0.0001889"	"0.0009061"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEYLASIFGTEK"	"[M].aEYLASIFGTEk.[D]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q7TP17"	"Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1"	"Q7TP17"	"Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"800.42688"	"1599.84648"	"1599.84676"	"-0.17"	"-0.00014"	"6/106"	"6"	"106"	"119964.315246582"	"HCD"	"MS2"	"8.464676"	"4.0"	"100.000"	"96.9682"	"33314"	"33314"	"33310"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"6.5"	""	"4.6"	""	"8.2"	""	"7.7"	"7.5"	""	"883"	"21"	"36.000"	"29.000"	"0.378382208669208"	"14"	"0.0006737"	"0.006716"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEYLASIFGTEK"	"[M].aEYLASIFGTEk.[D]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q7TP17"	"Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1"	"Q7TP17"	"Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"800.42731"	"1599.84734"	"1599.84676"	"0.36"	"0.00029"	"8/106"	"8"	"106"	"94451.6096801758"	"HCD"	"MS2"	"7.244012"	"4.7"	"100.000"	"96.8335"	"33268"	"33268"	"33262"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"6.9"	""	"7.2"	""	"11.1"	""	"5.0"	"9.3"	""	"887"	"24"	"36.000"	"29.000"	"0.163265199810463"	"14"	"0.0001889"	"0.0004167"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEYLASIFGTEK"	"[M].aEYLASIFGTEk.[D]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q7TP17"	"Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1"	"Q7TP17"	"Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"800.42737"	"1599.84746"	"1599.84676"	"0.44"	"0.00035"	"8/106"	"8"	"106"	"207693.663696289"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"97.0946"	"33345"	"33345"	"33340"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"12.4"	""	"11.9"	""	"14.8"	""	"16.5"	"15.6"	""	"887"	"57"	"36.000"	"29.000"	"7.99638368071218E-05"	"16"	"0"	"0.0001236"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEYLASIFGTEK"	"[M].aEYLASIFGTEk.[D]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q7TP17"	"Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1"	"Q7TP17"	"Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"800.42755"	"1599.84783"	"1599.84676"	"0.67"	"0.00054"	"8/106"	"8"	"106"	"201403.926940918"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"97.2277"	"33391"	"33391"	"33386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"16.7"	""	"13.3"	""	"12.3"	""	"16.2"	"20.0"	""	"886"	"34"	"36.000"	"29.000"	"0.0188540097018248"	"15"	"0.0001859"	"0.0003421"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVYDSWSSGK"	"[K].lVYDSWSSGk.[-]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"800.44080"	"1599.87432"	"1599.87828"	"-2.48"	"-0.00198"	"9/80"	"9"	"80"	"327862.100341797"	"HCD"	"MS2"	"0"	"36.5"	"100.000"	"48.6198"	"14283"	"14283"	"14255"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.0"	""	"50.9"	""	"42.9"	""	"64.1"	"3.0"	"61.3"	"71.5"	""	"953"	"5"	"36.000"	"29.000"	"13.8695670675874"	"14"	"0.003788"	"0.08915"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVYDSWSSGK"	"[K].lVYDSWSSGk.[-]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"800.44171"	"1599.87615"	"1599.87828"	"-1.33"	"-0.00107"	"9/80"	"9"	"80"	"443632.06829834"	"HCD"	"MS2"	"0"	"45.9"	"100.000"	"48.8188"	"14412"	"14412"	"14383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.6"	""	"63.2"	""	"58.7"	""	"70.5"	"0.7"	"75.0"	"102.2"	""	"928"	"43"	"36.000"	"29.000"	"0.00253815406782803"	"19"	"0"	"0.0001277"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESPYGLSFNK"	"[K].eSPYGLSFNk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"800.44177"	"1599.87627"	"1599.87828"	"-1.26"	"-0.00101"	"14/86"	"14"	"86"	"441437.387329102"	"HCD"	"MS2"	"0"	"50.1"	"100.000"	"46.0786"	"13291"	"13291"	"13273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.0"	""	"73.5"	""	"78.5"	""	"65.5"	""	"83.1"	"99.0"	""	"929"	"30"	"36.000"	"29.000"	"0.0429522301794304"	"14"	"0"	"0.0001019"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"533.98309"	"1599.93473"	"1599.93579"	"-0.67"	"-0.00036"	"9/96"	"9"	"96"	"5274680.69458008"	"HCD"	"MS2"	"5.188239"	"151.2"	"100.000"	"51.4260"	"15471"	"15471"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"215.3"	""	"209.9"	""	"203.6"	""	"244.0"	"4.0"	"261.2"	"294.4"	""	"780"	"16"	"35.000"	"28.000"	"0.993263798508165"	"19"	"0.0002277"	"0.001231"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWELELINVLK"	"[K].iWELELInVLK.[I]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P0C6S7"	"Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Rattus norvegicus OX=10116 GN=Anks1b PE=1 SV=1"	"P0C6S7"	"Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Rattus norvegicus OX=10116 GN=Anks1b PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"3"	"800.47815"	"1599.94902"	"1599.95591"	"-4.31"	"-0.00344"	"4/90"	"4"	"90"	"373896.627624512"	"HCD"	"MS2"	"0"	"34.5"	"100.000"	"63.7388"	"20480"	"20480"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.2"	""	"45.5"	""	"46.2"	""	"52.8"	"2.6"	"66.1"	"70.3"	""	"637"	"6"	"35.000"	"28.000"	"7.92701055872941"	"18"	"0.005886"	"0.1917"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWELELINVLK"	"[K].iWELELInVLK.[I]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P0C6S7"	"Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Rattus norvegicus OX=10116 GN=Anks1b PE=1 SV=1"	"P0C6S7"	"Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Rattus norvegicus OX=10116 GN=Anks1b PE=1 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"800.47858"	"1599.94988"	"1599.95591"	"-3.77"	"-0.00302"	"4/90"	"4"	"90"	"387785.186645508"	"HCD"	"MS2"	"0"	"33.5"	"100.000"	"63.6875"	"20406"	"20406"	"20377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.7"	""	"45.3"	""	"42.4"	""	"48.7"	"0.9"	"67.6"	"73.6"	""	"636"	"11"	"35.000"	"28.000"	"2.53178673432707"	"22"	"0.007689"	"0.3046"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEDILVLAK"	"[K].qLEDILVLAk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"800.50702"	"1600.00676"	"1600.00856"	"-1.13"	"-0.00090"	"9/92"	"9"	"92"	"616307.853881836"	"HCD"	"MS2"	"12.84214"	"47.2"	"100.000"	"72.5833"	"24081"	"24081"	"24063"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.5"	""	"51.3"	""	"65.4"	""	"87.1"	""	"83.1"	"100.9"	""	"283"	"60"	"31.000"	"24.000"	"1.32359902891879E-05"	""	"0"	"2.983E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEDILVLAK"	"[K].qLEDILVLAk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.4815"	"0.0000"	"1"	"1"	"1"	"534.00745"	"1600.00779"	"1600.00856"	"-0.49"	"-0.00026"	"7/92"	"7"	"92"	"1127951.17266846"	"HCD"	"MS2"	"7.732012"	"37.2"	"100.000"	"72.5695"	"24076"	"24076"	"24047"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.2"	""	"40.7"	""	"44.1"	""	"65.1"	""	"79.1"	"83.1"	""	"283"	"27"	"31.000"	"24.000"	"0.0294277081225173"	""	"0.0001308"	"0.0002392"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEDILVLAK"	"[K].qLEDILVLAk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"800.50757"	"1600.00786"	"1600.00856"	"-0.44"	"-0.00035"	"8/92"	"8"	"92"	"388205.80847168"	"HCD"	"MS2"	"9.559267"	"31.6"	"100.000"	"72.6934"	"24075"	"24075"	"24049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.8"	""	"36.2"	""	"39.1"	""	"58.2"	""	"61.2"	"72.3"	""	"283"	"46"	"31.000"	"24.000"	"0.000331708377367769"	""	"0"	"5.058E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEDILVLAK"	"[K].qLEDILVLAk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.3871"	"0.0000"	"1"	"1"	"1"	"534.00757"	"1600.00815"	"1600.00856"	"-0.26"	"-0.00014"	"8/92"	"8"	"92"	"1436964.47650146"	"HCD"	"MS2"	"9.76088"	"37.8"	"100.000"	"72.6173"	"24044"	"24044"	"24017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.3"	""	"44.8"	""	"45.5"	""	"63.6"	""	"76.0"	"88.2"	""	"285"	"31"	"31.000"	"24.000"	"0.0106614153822839"	""	"0"	"8.41E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDVAVLVGSMPR"	"[K].dLDVAVLVGSMPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"800.94830"	"1600.88933"	"1600.89299"	"-2.29"	"-0.00183"	"15/114"	"15"	"114"	"441121.940979004"	"HCD"	"MS2"	"54.5626"	"35.4"	"100.000"	"70.8722"	"23383"	"23383"	"23354"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.1"	""	"46.3"	""	"48.3"	""	"43.8"	""	"75.1"	"68.5"	""	"976"	"32"	"36.000"	"29.000"	"0.0318727709691966"	""	"0"	"0.0001367"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVLLMLGQEDR"	"[K].tPVLLMLGQEDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"534.30194"	"1600.89127"	"1600.89299"	"-1.08"	"-0.00057"	"7/114"	"7"	"114"	"2313441.68652344"	"HCD"	"MS2"	"5.334348"	"50.4"	"100.000"	"62.2131"	"19857"	"19857"	"19827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.1"	""	"62.5"	""	"71.5"	""	"82.5"	"1.3"	"93.9"	"95.6"	""	"1014"	"42"	"37.000"	"30.000"	"0.00341985710042846"	"20"	"0"	"5.83E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVLLMLGQEDR"	"[K].tPVLLMLGQEDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"800.94946"	"1600.89165"	"1600.89299"	"-0.84"	"-0.00067"	"11/114"	"11"	"114"	"2084521.45599365"	"HCD"	"MS2"	"100"	"117.2"	"100.000"	"61.9895"	"19712"	"19712"	"19689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.6"	""	"148.6"	""	"168.2"	""	"182.0"	"0.1"	"213.5"	"202.1"	""	"1015"	"22"	"37.000"	"30.000"	"0.294737941892066"	"17"	"0"	"0.0001061"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVLLMLGQEDR"	"[K].tPVLLMLGQEDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"534.30225"	"1600.89219"	"1600.89299"	"-0.51"	"-0.00027"	"8/114"	"8"	"114"	"1927871.88751221"	"HCD"	"MS2"	"6.792526"	"43.8"	"100.000"	"62.1160"	"19764"	"19764"	"19737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.5"	""	"61.0"	""	"52.0"	""	"69.7"	""	"94.7"	"86.4"	""	"1015"	"37"	"37.000"	"30.000"	"0.0110010983319599"	"19"	"0"	"0.0001162"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVLLMLGQEDR"	"[K].tPVLLMLGQEDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"800.95007"	"1600.89287"	"1600.89299"	"-0.08"	"-0.00006"	"11/114"	"11"	"114"	"1840850.84887695"	"HCD"	"MS2"	"10.52742"	"89.2"	"100.000"	"62.1232"	"19820"	"19820"	"19795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.6"	""	"125.9"	""	"133.0"	""	"121.8"	"3.3"	"148.4"	"151.5"	""	"1002"	"46"	"36.000"	"30.000"	"0.0011372022907938"	"19"	"0"	"2.649E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATLGGSQALGLDR"	"[R].lATLGGSQALGLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8434"	"0.0000"	"1"	"1"	"1"	"800.96198"	"1600.91667"	"1600.92199"	"-3.32"	"-0.00266"	"12/136"	"12"	"136"	"1117580.02044678"	"HCD"	"MS2"	"0"	"65.6"	"100.000"	"50.1500"	"14951"	"14951"	"14932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.6"	""	"93.0"	""	"99.7"	""	"97.1"	""	"108.7"	"114.4"	""	"942"	"83"	"36.000"	"29.000"	"2.24916287892773E-07"	""	"0"	"5.642E-07"	"1.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATLGGSQALGLDR"	"[R].lATLGGSQALGLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"800.96265"	"1600.91802"	"1600.92199"	"-2.48"	"-0.00198"	"12/136"	"12"	"136"	"1232150.4921875"	"HCD"	"MS2"	"0"	"68.7"	"100.000"	"49.8896"	"14798"	"14798"	"14778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.7"	""	"98.6"	""	"99.2"	""	"106.4"	"0.5"	"115.4"	"120.1"	""	"893"	"87"	"36.000"	"29.000"	"9.745889056379E-08"	""	"0"	"1.936E-06"	"1.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATLGGSQALGLDR"	"[R].lATLGGSQALGLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8556"	"0.0000"	"1"	"1"	"1"	"800.96436"	"1600.92143"	"1600.92199"	"-0.34"	"-0.00028"	"21/136"	"21"	"136"	"12249594.954834"	"HCD"	"MS2"	"0"	"559.0"	"100.000"	"49.8407"	"14825"	"14825"	"14798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"911.8"	""	"860.9"	""	"896.7"	""	"836.7"	"3.6"	"878.3"	"893.6"	""	"890"	"90"	"36.000"	"29.000"	"4.25951361726206E-08"	""	"0"	"4.955E-07"	"1.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATLGGSQALGLDR"	"[R].lATLGGSQALGLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7424"	"0.0000"	"1"	"1"	"1"	"800.96478"	"1600.92229"	"1600.92199"	"0.19"	"0.00015"	"12/136"	"12"	"136"	"10920762.4862671"	"HCD"	"MS2"	"2.22683"	"493.3"	"100.000"	"49.5931"	"14677"	"14677"	"14655"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"767.6"	""	"756.1"	""	"759.4"	""	"770.8"	""	"808.0"	"804.1"	""	"889"	"66"	"36.000"	"29.000"	"1.24701525206954E-05"	""	"0"	"1.483E-06"	"1.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATLGGSQALGLDR"	"[R].lATLGGSQALGLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"534.31244"	"1600.92276"	"1600.92199"	"0.49"	"0.00026"	"17/136"	"17"	"136"	"16639940.2355957"	"HCD"	"MS2"	"1.774291"	"157.4"	"99.556"	"49.6023"	"14681"	"14681"	"14655"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.1"	""	"224.0"	""	"232.4"	""	"270.6"	"0.7"	"278.5"	"262.6"	""	"869"	"81"	"36.000"	"29.000"	"3.61401358544111E-07"	"29"	"0"	"2.472E-06"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATLGGSQALGLDR"	"[R].lATLGGSQALGLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"534.31244"	"1600.92276"	"1600.92199"	"0.49"	"0.00026"	"18/136"	"18"	"136"	"18023755.9984131"	"HCD"	"MS2"	"1.622754"	"170.6"	"100.000"	"49.8453"	"14827"	"14827"	"14798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.5"	""	"252.3"	""	"260.1"	""	"265.8"	"2.7"	"290.7"	"291.3"	""	"869"	"80"	"36.000"	"29.000"	"4.26569481242183E-07"	"27"	"0"	"2.244E-06"	"1.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FENLGIQPPK"	"[K].fENLGIQPPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"800.97534"	"1600.94341"	"1600.94630"	"-1.81"	"-0.00145"	"7/86"	"7"	"86"	"728374.943786621"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"51.0048"	"15249"	"15249"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.4"	""	"82.3"	""	"95.8"	""	"106.9"	"0.3"	"118.7"	"118.2"	""	"702"	"14"	"35.000"	"28.000"	"1.36554845892992"	"21"	"0.0006037"	"0.004635"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVLGAITSVQQR"	"[R].lSVLGAITSVQQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"0"	"3"	"3"	"0.6591"	"0.0000"	"1"	"1"	"1"	"534.32318"	"1600.95499"	"1600.95837"	"-2.11"	"-0.00113"	"15/114"	"15"	"114"	"2333475.63397217"	"HCD"	"MS2"	"21.34639"	"52.8"	"100.000"	"61.5006"	"19566"	"19566"	"19539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.8"	""	"73.2"	""	"80.5"	""	"88.2"	""	"92.0"	"98.8"	""	"617"	"44"	"34.000"	"27.000"	"0.00125099383185826"	""	"0"	"6.295E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVLGAITSVQQR"	"[R].lSVLGAITSVQQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"534.32458"	"1600.95920"	"1600.95837"	"0.52"	"0.00028"	"15/114"	"15"	"114"	"2266860.93218994"	"HCD"	"MS2"	"19.48927"	"52.2"	"100.000"	"61.3325"	"19444"	"19444"	"19417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.6"	""	"75.4"	""	"68.3"	""	"91.3"	""	"92.1"	"98.3"	""	"604"	"40"	"34.000"	"27.000"	"0.00279258848529343"	""	"0"	"2.911E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEALFPDLPK"	"[K].lEALFPDLPk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AYG3"	"Exopolyphosphatase PRUNE1 OS=Rattus norvegicus OX=10116 GN=Prune1 PE=1 SV=1"	"Q6AYG3"	"Exopolyphosphatase PRUNE1 OS=Rattus norvegicus OX=10116 GN=Prune1 PE=1 SV=1"	"0"	"2"	"2"	"0.4884"	"0.0000"	"1"	"1"	"1"	"800.98846"	"1600.96965"	"1600.97145"	"-1.12"	"-0.00090"	"7/82"	"7"	"82"	"420235.044921875"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"75.3920"	"25228"	"25228"	"25199"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.8"	""	"38.2"	""	"45.4"	""	"50.9"	""	"55.3"	"55.6"	""	"514"	"43"	"34.000"	"27.000"	"0.00136123505080156"	""	"0.0001889"	"0.0003783"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEALFPDLPK"	"[K].lEALFPDLPk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AYG3"	"Exopolyphosphatase PRUNE1 OS=Rattus norvegicus OX=10116 GN=Prune1 PE=1 SV=1"	"Q6AYG3"	"Exopolyphosphatase PRUNE1 OS=Rattus norvegicus OX=10116 GN=Prune1 PE=1 SV=1"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"534.32825"	"1600.97019"	"1600.97145"	"-0.79"	"-0.00042"	"6/82"	"6"	"82"	"2019307.84802246"	"HCD"	"MS2"	"9.133181"	"46.9"	"100.000"	"75.3927"	"25176"	"25176"	"25153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.9"	""	"57.0"	""	"69.5"	""	"79.9"	"2.0"	"85.1"	"85.7"	""	"520"	"27"	"34.000"	"27.000"	"0.0528412822843417"	"24"	"0.0001889"	"0.0006854"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEALFPDLPK"	"[K].lEALFPDLPk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AYG3"	"Exopolyphosphatase PRUNE1 OS=Rattus norvegicus OX=10116 GN=Prune1 PE=1 SV=1"	"Q6AYG3"	"Exopolyphosphatase PRUNE1 OS=Rattus norvegicus OX=10116 GN=Prune1 PE=1 SV=1"	"0"	"2"	"2"	"0.4242"	"0.0000"	"1"	"1"	"1"	"800.98920"	"1600.97112"	"1600.97145"	"-0.21"	"-0.00017"	"13/82"	"13"	"82"	"449518.40838623"	"HCD"	"MS2"	"0"	"33.3"	"100.000"	"75.4664"	"25206"	"25206"	"25185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.9"	""	"39.8"	""	"50.6"	""	"48.7"	""	"58.3"	"66.2"	""	"530"	"33"	"34.000"	"27.000"	"0.0130691058048058"	""	"0.0001889"	"0.0004474"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLPLLEVAEK"	"[K].mLPLLEVAEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"800.98993"	"1600.97258"	"1600.97482"	"-1.40"	"-0.00112"	"9/78"	"9"	"78"	"587027.389343262"	"HCD"	"MS2"	"0"	"44.0"	"100.000"	"71.8732"	"23740"	"23740"	"23715"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.3"	""	"46.0"	""	"48.1"	""	"63.7"	""	"107.6"	"111.2"	""	"556"	"44"	"34.000"	"27.000"	"0.00108904241835964"	"26"	"0"	"4.398E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSQPFLVLPK"	"[K].nSQPFLVLPk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"800.99225"	"1600.97722"	"1600.98268"	"-3.41"	"-0.00273"	"7/90"	"7"	"90"	"1032576.47161865"	"HCD"	"MS2"	"0"	"85.2"	"100.000"	"54.7530"	"16760"	"16760"	"16736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.0"	""	"104.1"	""	"123.9"	""	"158.7"	"1.7"	"166.1"	"160.8"	""	"525"	"30"	"34.000"	"27.000"	"0.0277414596168585"	"20"	"0.0001308"	"0.0002574"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSQPFLVLPK"	"[K].nSQPFLVLPk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"534.33081"	"1600.97788"	"1600.98268"	"-3.00"	"-0.00160"	"5/90"	"5"	"90"	"3275538.45074463"	"HCD"	"MS2"	"31.16651"	"89.2"	"100.000"	"54.1531"	"16568"	"16568"	"16555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.9"	""	"99.8"	""	"110.4"	""	"162.2"	"0.6"	"180.5"	"181.5"	""	"523"	"16"	"34.000"	"27.000"	"0.708715111739455"	"24"	"0.0001859"	"0.0003398"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSQPFLVLPK"	"[K].nSQPFLVLPk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"534.33099"	"1600.97843"	"1600.98268"	"-2.66"	"-0.00142"	"4/90"	"4"	"90"	"3010320.22058105"	"HCD"	"MS2"	"0"	"89.5"	"100.000"	"53.9929"	"16449"	"16449"	"16434"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.7"	""	"107.5"	""	"117.3"	""	"152.2"	""	"170.7"	"187.3"	""	"513"	"17"	"34.000"	"27.000"	"0.460349175282542"	"21"	"0.0001889"	"0.0004533"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSQPFLVLPK"	"[K].nSQPFLVLPk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"534.33179"	"1600.98081"	"1600.98268"	"-1.17"	"-0.00063"	"7/90"	"7"	"90"	"3085403.91113281"	"HCD"	"MS2"	"16.50152"	"106.9"	"100.000"	"54.4466"	"16688"	"16688"	"16667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.0"	""	"136.3"	""	"149.3"	""	"164.1"	""	"202.3"	"206.6"	""	"455"	"19"	"33.000"	"26.000"	"0.294429553929872"	"16"	"0"	"0.0001069"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSQPFLVLPK"	"[K].nSQPFLVLPk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"534.33197"	"1600.98136"	"1600.98268"	"-0.83"	"-0.00044"	"4/90"	"4"	"90"	"2846265.53985596"	"HCD"	"MS2"	"18.57122"	"102.0"	"100.000"	"54.3554"	"16597"	"16597"	"16577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.6"	""	"140.7"	""	"133.9"	""	"166.4"	""	"191.2"	"207.5"	""	"455"	"17"	"33.000"	"26.000"	"0.458122266843693"	"14"	"7.476E-05"	"0.0001934"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSQPFLVLPK"	"[K].nSQPFLVLPk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"800.99475"	"1600.98223"	"1600.98268"	"-0.29"	"-0.00023"	"7/90"	"7"	"90"	"699792.557983398"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"54.3893"	"16665"	"16665"	"16637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.3"	""	"82.9"	""	"90.5"	""	"80.1"	"1.2"	"112.7"	"102.8"	""	"456"	"31"	"33.000"	"26.000"	"0.0175361740385347"	"22"	"0.00109"	"0.01504"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSQPFLVLPK"	"[K].nSQPFLVLPk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"800.99475"	"1600.98223"	"1600.98268"	"-0.29"	"-0.00023"	"5/90"	"5"	"90"	"1085290.27374268"	"HCD"	"MS2"	"0"	"84.3"	"100.000"	"54.9154"	"16880"	"16880"	"16853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.3"	""	"100.4"	""	"112.4"	""	"149.3"	"0.4"	"169.9"	"165.3"	""	"456"	"22"	"33.000"	"26.000"	"0.137067612146187"	"19"	"0.0003839"	"0.001785"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSQPFLVLPK"	"[K].nSQPFLVLPk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"800.99500"	"1600.98271"	"1600.98268"	"0.02"	"0.00001"	"8/90"	"8"	"90"	"634311.636352539"	"HCD"	"MS2"	"0"	"52.7"	"100.000"	"54.4834"	"16703"	"16703"	"16680"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.5"	""	"73.0"	""	"78.1"	""	"73.6"	""	"102.0"	"95.0"	""	"456"	"52"	"33.000"	"26.000"	"0.000138654780291548"	"24"	"0"	"0.0001588"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSQPFLVLPK"	"[K].nSQPFLVLPk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"800.99567"	"1600.98406"	"1600.98268"	"0.86"	"0.00069"	"10/90"	"10"	"90"	"1021285.25085449"	"HCD"	"MS2"	"0"	"87.1"	"100.000"	"54.1646"	"16573"	"16573"	"16555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.1"	""	"105.0"	""	"113.4"	""	"145.6"	""	"169.8"	"185.4"	""	"506"	"15"	"34.000"	"27.000"	"0.841628669833831"	"21"	"0.005478"	"0.1752"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLLFGPPGTGK"	"[K].gVLLFGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"800.99603"	"1600.98479"	"1600.98268"	"1.31"	"0.00105"	"19/88"	"19"	"88"	"3509355.21472168"	"HCD"	"MS2"	"11.7998"	"210.9"	"100.000"	"58.2464"	"18242"	"18242"	"18213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"309.9"	""	"285.0"	""	"304.6"	""	"337.6"	"0.9"	"394.3"	"365.2"	""	"506"	"61"	"34.000"	"27.000"	"2.05646120589517E-05"	""	"0"	"7.004E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLLFGPPGTGK"	"[K].gVLLFGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"800.99646"	"1600.98564"	"1600.98268"	"1.85"	"0.00148"	"11/88"	"11"	"88"	"3053962.58825684"	"HCD"	"MS2"	"11.5397"	"191.8"	"100.000"	"58.0594"	"18111"	"18111"	"18091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.2"	""	"262.2"	""	"281.4"	""	"308.6"	""	"351.1"	"325.6"	""	"490"	"75"	"33.000"	"26.000"	"7.1806884508633E-07"	""	"0"	"4.363E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSQPFLVLPK"	"[K].nSQPFLVLPk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"800.99731"	"1600.98735"	"1600.98268"	"2.92"	"0.00233"	"7/90"	"7"	"90"	"627806.883605957"	"HCD"	"MS2"	"0"	"51.2"	"100.000"	"54.3344"	"16589"	"16589"	"16570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.4"	""	"78.6"	""	"76.0"	""	"73.1"	""	"90.9"	"91.5"	""	"490"	"37"	"33.000"	"26.000"	"0.00514240271487763"	"23"	"0.0001889"	"0.0007278"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPCIYSGFSSPR"	"[K].lPcIYSGFSSPR.[V]"	"N-Term(TMT6plex); C3(Methylthio)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"801.40375"	"1601.80022"	"1601.80174"	"-0.95"	"-0.00076"	"11/96"	"11"	"96"	"842737.235046387"	"HCD"	"MS2"	"0"	"45.7"	"100.000"	"65.2646"	"21103"	"21103"	"21075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.3"	""	"71.9"	""	"72.1"	""	"70.0"	"2.3"	"78.6"	"78.2"	""	"707"	"49"	"35.000"	"28.000"	"0.000454348834290069"	"20"	"0"	"8.982E-06"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPCIYSGFSSPR"	"[K].lPcIYSGFSSPR.[V]"	"N-Term(TMT6plex); C3(Methylthio)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.40564"	"1601.80400"	"1601.80174"	"1.41"	"0.00113"	"11/96"	"11"	"96"	"859186.712158203"	"HCD"	"MS2"	"10.56395"	"45.0"	"100.000"	"65.3211"	"21073"	"21073"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.9"	""	"73.1"	""	"73.4"	""	"62.6"	"2.2"	"81.0"	"78.3"	""	"724"	"36"	"35.000"	"28.000"	"0.0083312193790188"	"15"	"0"	"3.814E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMYAIGGDDYVR"	"[K].lMYAIGGDDYVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99ML5"	"Prenylcysteine oxidase OS=Rattus norvegicus OX=10116 GN=Pcyox1 PE=1 SV=1"	"Q99ML5"	"Prenylcysteine oxidase OS=Rattus norvegicus OX=10116 GN=Pcyox1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"801.41132"	"1601.81536"	"1601.81949"	"-2.58"	"-0.00207"	"6/90"	"6"	"90"	"866852.377807617"	"HCD"	"MS2"	"100"	"72.6"	"100.000"	"54.9636"	"16900"	"16900"	"16869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.3"	""	"80.5"	""	"100.8"	""	"127.9"	""	"146.1"	"141.8"	""	"786"	"10"	"35.000"	"28.000"	"3.56773468360027"	"17"	"0.0006037"	"0.004144"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].iMLPWDPSGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"534.64148"	"1601.90989"	"1601.91256"	"-1.67"	"-0.00089"	"12/76"	"12"	"76"	"3363448.38812256"	"HCD"	"MS2"	"0"	"88.8"	"100.000"	"69.6240"	"22874"	"22874"	"22857"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.9"	""	"129.3"	""	"136.4"	""	"102.6"	""	"161.8"	"176.8"	""	"928"	"33"	"36.000"	"29.000"	"0.0250910005846749"	"18"	"7.476E-05"	"0.0001888"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].iMLPWDPSGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"801.45874"	"1601.91020"	"1601.91256"	"-1.47"	"-0.00118"	"9/76"	"9"	"76"	"5308026.95635986"	"HCD"	"MS2"	"0"	"279.7"	"100.000"	"69.5484"	"22843"	"22843"	"22826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"437.2"	""	"384.6"	""	"437.3"	""	"322.0"	"5.1"	"545.0"	"519.2"	""	"928"	"38"	"36.000"	"29.000"	"0.00691063540057863"	"27"	"0.0001859"	"0.000328"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].iMLPWDPSGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"801.45880"	"1601.91033"	"1601.91256"	"-1.39"	"-0.00112"	"10/76"	"10"	"76"	"4219557.03955078"	"HCD"	"MS2"	"0"	"225.2"	"100.000"	"69.6790"	"22844"	"22844"	"22826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"366.3"	""	"315.9"	""	"334.9"	""	"234.9"	""	"445.2"	"437.0"	""	"948"	"38"	"36.000"	"29.000"	"0.00790275178749203"	"27"	"0.0001859"	"0.0003603"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].iMLPWDPSGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"534.64185"	"1601.91098"	"1601.91256"	"-0.98"	"-0.00052"	"9/76"	"9"	"76"	"3823589.42590332"	"HCD"	"MS2"	"0"	"103.4"	"100.000"	"69.4212"	"22739"	"22739"	"22714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.0"	""	"157.0"	""	"152.7"	""	"130.9"	""	"204.2"	"178.4"	""	"952"	"30"	"36.000"	"29.000"	"0.0511218960274432"	"21"	"0.0001859"	"0.0003224"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].iMLPWDPSGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"534.64185"	"1601.91098"	"1601.91256"	"-0.98"	"-0.00052"	"10/76"	"10"	"76"	"3864787.07910156"	"HCD"	"MS2"	"5.066053"	"98.5"	"100.000"	"69.2996"	"22741"	"22741"	"22714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.2"	""	"141.2"	""	"148.4"	""	"129.9"	""	"189.9"	"178.9"	""	"952"	"28"	"36.000"	"29.000"	"0.083101134479016"	"22"	"0.0001308"	"0.0002779"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].iMLPWDPSGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"534.64191"	"1601.91117"	"1601.91256"	"-0.87"	"-0.00046"	"12/76"	"12"	"76"	"2738006.27105713"	"HCD"	"MS2"	"6.515542"	"80.0"	"100.000"	"69.7593"	"22877"	"22877"	"22858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.6"	""	"115.8"	""	"119.7"	""	"104.9"	"1.8"	"151.3"	"146.7"	""	"945"	"33"	"36.000"	"29.000"	"0.0264485466706439"	"20"	"0.0001308"	"0.0002298"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].iMLPWDPSGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"801.45959"	"1601.91191"	"1601.91256"	"-0.40"	"-0.00032"	"9/76"	"9"	"76"	"1482257.06378174"	"HCD"	"MS2"	"0"	"89.7"	"100.000"	"69.2468"	"22719"	"22719"	"22698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.9"	""	"135.1"	""	"132.6"	""	"117.9"	"2.1"	"164.3"	"153.4"	""	"933"	"48"	"36.000"	"29.000"	"0.000820071365911731"	"27"	"0"	"0.0001207"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].iMLPWDPSGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"801.46039"	"1601.91350"	"1601.91256"	"0.59"	"0.00047"	"9/76"	"9"	"76"	"1566295.51971436"	"HCD"	"MS2"	"20.77974"	"96.2"	"100.000"	"69.3775"	"22721"	"22721"	"22698"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.2"	""	"142.3"	""	"154.7"	""	"116.2"	"0.4"	"171.3"	"166.6"	""	"890"	"41"	"36.000"	"29.000"	"0.00330643516364032"	"29"	"0"	"0.0001793"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGAEVYHNLK"	"[R].iGAEVYHNLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"534.65076"	"1601.93772"	"1601.94155"	"-2.39"	"-0.00128"	"7/76"	"7"	"76"	"47658357.619873"	"HCD"	"MS2"	"1.488549"	"581.8"	"44.066"	"37.9545"	"9938"	"9938"	"9911"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"928.9"	""	"882.9"	""	"860.4"	""	"805.2"	""	"1019.0"	"1016.3"	""	"814"	"25"	"36.000"	"29.000"	"0.135704549994636"	"20"	"0"	"8.177E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVAQHDAYK"	"[K].vLVAQHDAYk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.65155"	"1601.94010"	"1601.94155"	"-0.91"	"-0.00048"	"10/82"	"10"	"82"	"6177787.1817627"	"HCD"	"MS2"	"49.94271"	"288.9"	"100.000"	"32.6229"	"7763"	"7763"	"7736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"451.4"	""	"487.9"	""	"398.7"	""	"409.6"	"3.1"	"458.7"	"523.2"	""	"744"	"30"	"35.000"	"28.000"	"0.0405081994720037"	"14"	"0"	"6.78E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGAEVYHNLK"	"[R].iGAEVYHNLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.6279"	"0.0000"	"1"	"1"	"1"	"534.65155"	"1601.94010"	"1601.94155"	"-0.91"	"-0.00048"	"13/76"	"13"	"76"	"70427010.541748"	"HCD"	"MS2"	"5.843867"	"593.4"	"30.126"	"38.0548"	"10022"	"10022"	"10001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1031.0"	""	"864.1"	""	"905.3"	""	"803.2"	"2.9"	"980.4"	"1023.3"	""	"744"	"43"	"35.000"	"28.000"	"0.00167703814089423"	""	"0"	"9.201E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVAQHDAYK"	"[K].vLVAQHDAYk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"534.65167"	"1601.94046"	"1601.94155"	"-0.68"	"-0.00036"	"11/82"	"11"	"82"	"6911315.96203613"	"HCD"	"MS2"	"15.32287"	"311.5"	"100.000"	"32.6979"	"7836"	"7836"	"7814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"505.0"	""	"515.6"	""	"441.3"	""	"415.2"	"6.0"	"498.3"	"564.4"	""	"744"	"40"	"35.000"	"28.000"	"0.00396773757097656"	"20"	"0.0001308"	"0.00024"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGAEVYHNLK"	"[R].iGAEVYHNLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"801.47437"	"1601.94145"	"1601.94155"	"-0.06"	"-0.00005"	"13/76"	"13"	"76"	"1337791.2366333"	"HCD"	"MS2"	"0"	"104.6"	"100.000"	"38.1510"	"10062"	"10062"	"10033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.7"	""	"151.0"	""	"151.2"	""	"141.2"	""	"182.0"	"182.6"	""	"726"	"37"	"35.000"	"28.000"	"0.0076367157363523"	"25"	"0"	"4.153E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEVPFKPAR"	"[K].sIEVPFkPAR.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"534.66406"	"1601.97763"	"1601.97793"	"-0.19"	"-0.00010"	"10/82"	"10"	"82"	"20017040.7255249"	"HCD"	"MS2"	"57.87719"	"635.1"	"72.816"	"40.4367"	"10997"	"10997"	"10973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1003.2"	""	"927.8"	""	"995.9"	""	"946.0"	""	"1062.3"	"1072.5"	""	"552"	"24"	"34.000"	"27.000"	"0.123001124557711"	"21"	"0.0001889"	"0.001037"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEVPFKPAR"	"[K].sIEVPFkPAR.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"534.66425"	"1601.97818"	"1601.97793"	"0.16"	"0.00008"	"9/82"	"9"	"82"	"19306518.4766846"	"HCD"	"MS2"	"31.79083"	"820.9"	"100.000"	"40.2861"	"10891"	"10891"	"10869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1287.4"	""	"1191.8"	""	"1253.7"	""	"1246.9"	"0.9"	"1387.8"	"1396.4"	""	"552"	"20"	"34.000"	"27.000"	"0.304725699092972"	"17"	"0.0001889"	"0.0007457"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTVINQTQK"	"[R].vLTVINQTQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"801.50220"	"1601.99712"	"1601.99906"	"-1.21"	"-0.00097"	"8/90"	"8"	"90"	"995565.682678223"	"HCD"	"MS2"	"100"	"71.6"	"100.000"	"43.4675"	"12182"	"12182"	"12159"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.3"	""	"90.5"	""	"97.2"	""	"129.4"	"0.9"	"140.5"	"127.5"	""	"419"	"14"	"33.000"	"26.000"	"0.918721811838596"	"15"	"0.0001889"	"0.0005402"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTVINQTQK"	"[R].vLTVINQTQk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"801.50293"	"1601.99858"	"1601.99906"	"-0.30"	"-0.00024"	"9/90"	"9"	"90"	"1530195.28710938"	"HCD"	"MS2"	"100"	"108.1"	"100.000"	"43.6009"	"12285"	"12285"	"12258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.7"	""	"152.3"	""	"144.6"	""	"196.0"	"0.1"	"211.9"	"183.6"	""	"429"	"32"	"33.000"	"26.000"	"0.0144021488952617"	"20"	"0"	"8.865E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGEVEWK"	"[R].nPWGEVEWk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"801.93677"	"1602.86626"	"1602.86805"	"-1.12"	"-0.00090"	"6/84"	"6"	"84"	"3764794.92749023"	"HCD"	"MS2"	"42.24636"	"285.7"	"100.000"	"56.0985"	"17310"	"17310"	"17291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"472.7"	""	"376.0"	""	"433.2"	""	"416.0"	"3.9"	"506.0"	"495.8"	""	"1042"	"38"	"37.000"	"30.000"	"0.00797696567536338"	"19"	"0"	"0.0001808"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSGYVSGWGK"	"[K].fGSGYVSGWGk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"534.96045"	"1602.86679"	"1602.86805"	"-0.78"	"-0.00042"	"13/88"	"13"	"88"	"4438313.23565674"	"HCD"	"MS2"	"35.95074"	"163.3"	"100.000"	"51.5087"	"15505"	"15505"	"15478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.6"	""	"232.9"	""	"227.5"	""	"238.6"	""	"278.3"	"302.9"	""	"1037"	"33"	"37.000"	"30.000"	"0.0258076678561578"	"18"	"0.0001889"	"0.0005991"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGEVEWK"	"[R].nPWGEVEWk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"801.93707"	"1602.86687"	"1602.86805"	"-0.74"	"-0.00059"	"6/84"	"6"	"84"	"3539805.38122559"	"HCD"	"MS2"	"40.15594"	"265.7"	"100.000"	"56.3019"	"17447"	"17447"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"407.2"	""	"366.5"	""	"407.7"	""	"386.7"	"2.6"	"463.6"	"481.0"	""	"1037"	"38"	"37.000"	"30.000"	"0.00768685627148177"	"16"	"0.0001308"	"0.0002775"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSGYVSGWGK"	"[K].fGSGYVSGWGk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"534.96057"	"1602.86716"	"1602.86805"	"-0.55"	"-0.00030"	"13/88"	"13"	"88"	"6174689.11401367"	"HCD"	"MS2"	"36.5828"	"212.7"	"100.000"	"51.2214"	"15337"	"15337"	"15314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.4"	""	"310.7"	""	"303.3"	""	"320.9"	"2.6"	"360.4"	"390.8"	""	"1037"	"39"	"37.000"	"30.000"	"0.00626251473502865"	"15"	"0.0001889"	"0.0004356"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSGYVSGWGK"	"[K].fGSGYVSGWGk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"801.93793"	"1602.86858"	"1602.86805"	"0.33"	"0.00026"	"9/88"	"9"	"88"	"3696317.57183838"	"HCD"	"MS2"	"25.46416"	"359.7"	"100.000"	"51.1868"	"15323"	"15323"	"15298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"577.2"	""	"567.5"	""	"526.5"	""	"503.3"	"5.3"	"606.3"	"616.0"	""	"1034"	"60"	"37.000"	"30.000"	"4.80275621965227E-05"	"25"	"0"	"1.017E-05"	"1.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSGYVSGWGK"	"[K].fGSGYVSGWGk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"P16296"	"Coagulation factor IX OS=Rattus norvegicus OX=10116 GN=F9 PE=2 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"801.93811"	"1602.86894"	"1602.86805"	"0.56"	"0.00045"	"9/88"	"9"	"88"	"4115510.47253418"	"HCD"	"MS2"	"19.88704"	"375.0"	"100.000"	"51.3937"	"15458"	"15458"	"15430"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"613.9"	""	"610.6"	""	"515.1"	""	"552.0"	""	"633.9"	"625.5"	""	"1033"	"60"	"37.000"	"30.000"	"4.75412203810513E-05"	"25"	"0"	"1.369E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNPYTEFK"	"[R].vFNPYTEFk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZY0"	"EF-hand domain-containing protein D2 OS=Rattus norvegicus OX=10116 GN=Efhd2 PE=1 SV=1"	"Q4FZY0"	"EF-hand domain-containing protein D2 OS=Rattus norvegicus OX=10116 GN=Efhd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"801.95032"	"1602.89336"	"1602.89320"	"0.10"	"0.00008"	"8/78"	"8"	"78"	"4307438.29840088"	"HCD"	"MS2"	"0"	"340.4"	"100.000"	"56.9287"	"17703"	"17703"	"17685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"506.9"	""	"537.1"	""	"532.3"	""	"383.2"	"5.1"	"558.3"	"699.9"	""	"999"	"47"	"36.000"	"29.000"	"0.00103641930196873"	"18"	"0"	"0.0001683"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNPYTEFK"	"[R].vFNPYTEFk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZY0"	"EF-hand domain-containing protein D2 OS=Rattus norvegicus OX=10116 GN=Efhd2 PE=1 SV=1"	"Q4FZY0"	"EF-hand domain-containing protein D2 OS=Rattus norvegicus OX=10116 GN=Efhd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"801.95117"	"1602.89507"	"1602.89320"	"1.16"	"0.00093"	"8/78"	"8"	"78"	"4134486.53063965"	"HCD"	"MS2"	"0"	"329.2"	"100.000"	"56.7237"	"17565"	"17565"	"17547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"466.9"	""	"551.8"	""	"515.1"	""	"370.9"	"4.7"	"551.1"	"655.7"	""	"1063"	"45"	"37.000"	"30.000"	"0.00154348804084786"	"20"	"0.0001308"	"0.0002316"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVSWNGPFKTK"	"[R].lPVSWNGPFKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"1"	"3"	"3"	"0.0612"	"0.0000"	"1"	"1"	"1"	"534.98450"	"1602.93894"	"1602.92053"	"11.48"	"0.00614"	"7/114"	"7"	"114"	"3798876.62451172"	"HCD"	"MS2"	"5.067218"	"94.3"	"100.000"	"64.5501"	"20811"	"20811"	"20787"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.5"	""	"135.1"	""	"149.9"	""	"140.9"	"0.7"	"159.6"	"169.0"	""	"851"	"49"	"36.000"	"29.000"	"0.00049991890962677"	"22"	"0.002981"	"0.05525"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVGYPLAWK"	"[R].nPVGYPLAWk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"801.97388"	"1602.94048"	"1602.94082"	"-0.21"	"-0.00017"	"9/92"	"9"	"92"	"2323620.5269165"	"HCD"	"MS2"	"27.43276"	"166.7"	"100.000"	"56.0535"	"17346"	"17346"	"17317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"263.5"	""	"261.3"	""	"258.8"	""	"256.2"	"2.7"	"267.6"	"265.3"	""	"853"	"45"	"36.000"	"29.000"	"0.00148224172855527"	"20"	"0"	"5.257E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVSWNGPFKTK"	"[R].lPVSWNGPFKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"1"	"2"	"2"	"0.1034"	"0.0000"	"1"	"1"	"1"	"801.97394"	"1602.94060"	"1602.92053"	"12.52"	"0.01004"	"9/114"	"9"	"114"	"1438317.93835449"	"HCD"	"MS2"	"15.30508"	"108.4"	"100.000"	"64.5110"	"20795"	"20795"	"20771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.9"	""	"170.3"	""	"165.2"	""	"161.0"	"4.2"	"194.2"	"179.3"	""	"852"	"58"	"36.000"	"29.000"	"6.87716745208083E-05"	""	"0.004291"	"0.1108"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPFYLYTGR"	"[K].kPFYLYTGR.[G]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.98523"	"1602.94114"	"1602.94082"	"0.20"	"0.00011"	"8/80"	"8"	"80"	"12877866.9973145"	"HCD"	"MS2"	"15.80161"	"587.2"	"100.000"	"40.0920"	"10812"	"10812"	"10789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"955.4"	""	"927.2"	""	"923.1"	""	"838.6"	"1.7"	"957.9"	"946.4"	""	"849"	"7"	"36.000"	"29.000"	"7.68913869317021"	"13"	"0.0001308"	"0.0002253"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPFYLYTGR"	"[K].kPFYLYTGR.[G]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"534.98523"	"1602.94114"	"1602.94082"	"0.20"	"0.00011"	"6/80"	"6"	"80"	"13403952.0036621"	"HCD"	"MS2"	"19.0235"	"559.1"	"99.389"	"40.2415"	"10917"	"10917"	"10893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"932.4"	""	"861.1"	""	"925.9"	""	"797.3"	"1.6"	"872.7"	"890.2"	""	"849"	"7"	"36.000"	"29.000"	"7.83209045441686"	"16"	"0.0001308"	"0.0002348"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVSWNGPFKTK"	"[R].lPVSWNGPFKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"1"	"3"	"3"	"0.0889"	"0.0000"	"1"	"1"	"1"	"534.98529"	"1602.94132"	"1602.92053"	"12.97"	"0.00693"	"12/114"	"12"	"114"	"3330110.07824707"	"HCD"	"MS2"	"9.499531"	"86.2"	"100.000"	"64.5353"	"20752"	"20752"	"20729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.9"	""	"120.3"	""	"135.9"	""	"126.9"	"1.2"	"157.5"	"153.6"	""	"850"	"45"	"36.000"	"29.000"	"0.00124562962923139"	""	"0.003976"	"0.1012"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVSWNGPFKTK"	"[R].lPVSWNGPFKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"1"	"2"	"2"	"0.0862"	"0.0000"	"1"	"1"	"1"	"801.97479"	"1602.94231"	"1602.92053"	"13.59"	"0.01089"	"9/114"	"9"	"114"	"1266007.58325195"	"HCD"	"MS2"	"23.65588"	"99.1"	"100.000"	"64.5009"	"20738"	"20738"	"20713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.1"	""	"141.0"	""	"148.1"	""	"152.2"	"1.9"	"178.3"	"172.2"	""	"846"	"58"	"36.000"	"29.000"	"6.32907682527946E-05"	""	"0.002953"	"0.05121"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVGYPLAWK"	"[R].nPVGYPLAWk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"801.97479"	"1602.94231"	"1602.94082"	"0.93"	"0.00074"	"8/92"	"8"	"92"	"2935720.12005615"	"HCD"	"MS2"	"42.19573"	"210.9"	"100.000"	"55.8705"	"17217"	"17217"	"17195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.2"	""	"321.4"	""	"366.1"	""	"319.0"	""	"318.9"	"335.2"	""	"846"	"46"	"36.000"	"29.000"	"0.0011411437799242"	"23"	"0"	"0.0001003"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLMLGLDNAGK"	"[R].lLMLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"534.99243"	"1602.96274"	"1602.96532"	"-1.61"	"-0.00086"	"7/86"	"7"	"86"	"2656960.02319336"	"HCD"	"MS2"	"24.14304"	"90.1"	"100.000"	"66.5430"	"21572"	"21572"	"21545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.6"	""	"130.5"	""	"142.7"	""	"130.8"	""	"174.3"	"158.0"	""	"672"	"40"	"35.000"	"28.000"	"0.00365039009535334"	"23"	"0.0001889"	"0.000727"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLMLGLDNAGK"	"[R].lLMLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"801.98553"	"1602.96379"	"1602.96532"	"-0.95"	"-0.00076"	"10/86"	"10"	"86"	"1014096.25622559"	"HCD"	"MS2"	"0"	"81.7"	"100.000"	"66.5315"	"21567"	"21567"	"21545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.3"	""	"126.1"	""	"127.9"	""	"97.8"	""	"145.1"	"146.7"	""	"664"	"62"	"35.000"	"28.000"	"1.95046465039886E-05"	""	"0"	"7.606E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLMLGLDNAGK"	"[R].lLMLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"534.99292"	"1602.96421"	"1602.96532"	"-0.69"	"-0.00037"	"8/86"	"8"	"86"	"3010389.99053955"	"HCD"	"MS2"	"34.30637"	"92.1"	"100.000"	"66.4662"	"21593"	"21593"	"21571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.1"	""	"135.6"	""	"136.1"	""	"132.9"	""	"173.5"	"170.2"	""	"659"	"46"	"35.000"	"28.000"	"0.000751372712724138"	"21"	"0"	"0.0001796"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLMLGLDNAGK"	"[R].lLMLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7627"	"0.0000"	"1"	"1"	"1"	"801.98590"	"1602.96453"	"1602.96532"	"-0.50"	"-0.00040"	"10/86"	"10"	"86"	"976378.072387695"	"HCD"	"MS2"	"8.182883"	"75.2"	"100.000"	"66.5054"	"21609"	"21609"	"21587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.6"	""	"110.5"	""	"124.1"	""	"95.5"	"0.6"	"127.0"	"138.4"	""	"659"	"59"	"35.000"	"28.000"	"4.07244679319966E-05"	""	"0"	"8.145E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTVINQTQK"	"[R].vLTVINqTQk.[E]"	"N-Term(TMT6plex); Q7(Deamidated); K10(TMT6plex)"	"1"	"1"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"801.98730"	"1602.96733"	"1602.98308"	"-9.82"	"-0.00787"	"13/90"	"13"	"90"	"970472.457763672"	"HCD"	"MS2"	"0"	"71.0"	"100.000"	"43.8553"	"12388"	"12388"	"12375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.8"	""	"86.8"	""	"99.2"	""	"132.7"	"2.2"	"137.2"	"128.7"	""	"638"	"9"	"35.000"	"28.000"	"4.1095160699011"	"18"	"0.002297"	"0.03333"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIGSLSNAIK"	"[K].eIIGSLSNAIk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"801.99658"	"1602.98589"	"1602.98308"	"1.75"	"0.00140"	"10/98"	"10"	"98"	"699595.831604004"	"HCD"	"MS2"	"0"	"68.3"	"100.000"	"55.1566"	"16979"	"16979"	"16949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.0"	""	"86.2"	""	"108.3"	""	"108.3"	"0.5"	"129.3"	"122.6"	""	"473"	"75"	"33.000"	"26.000"	"7.92193263608261E-07"	""	"0"	"5.732E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYDAFSSWK"	"[R].aAYDAFSSWk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P51650"	"Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2"	"P51650"	"Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"802.42883"	"1603.85039"	"1603.85206"	"-1.04"	"-0.00084"	"15/80"	"15"	"80"	"674766.021972656"	"HCD"	"MS2"	"20.34024"	"72.2"	"100.000"	"55.7059"	"17204"	"17204"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.9"	""	"111.3"	""	"104.2"	""	"110.5"	"0.0"	"120.0"	"128.9"	""	"1049"	"38"	"37.000"	"30.000"	"0.00749454881239073"	"24"	"0"	"0.0001164"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPFFPFHSPSR"	"[R].rPFFPFHSPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"4"	"4"	"0.9375"	"0.0000"	"1"	"1"	"1"	"401.72235"	"1603.86757"	"1603.86950"	"-1.20"	"-0.00048"	"10/104"	"10"	"104"	"10710311.5982666"	"HCD"	"MS2"	"10.36187"	"134.8"	"100.000"	"34.4943"	"8561"	"8561"	"8538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.6"	""	"224.8"	""	"233.2"	""	"182.3"	""	"191.3"	"224.6"	""	"1122"	"16"	"37.000"	"30.000"	"1.36761186910487"	"14"	"0"	"6.459E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPFFPFHSPSR"	"[R].rPFFPFHSPSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"4"	"4"	"0.9444"	"0.0000"	"1"	"1"	"1"	"401.72278"	"1603.86928"	"1603.86950"	"-0.13"	"-0.00005"	"11/104"	"11"	"104"	"9795727.86572266"	"HCD"	"MS2"	"12.29794"	"126.9"	"100.000"	"34.4258"	"8490"	"8490"	"8467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.5"	""	"199.8"	""	"221.4"	""	"194.1"	"0.5"	"175.4"	"211.6"	""	"1131"	"18"	"37.000"	"30.000"	"0.871831606142976"	"15"	"0"	"4.893E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEGLQLMNLMLR"	"[K].gEGLQLMNLMLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"Q4V8K2"	"Beta-catenin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ctnnbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"802.44690"	"1603.88652"	"1603.88613"	"0.24"	"0.00019"	"7/102"	"7"	"102"	"354719.930725098"	"HCD"	"MS2"	"30.09674"	"26.8"	"100.000"	"74.2965"	"24729"	"24729"	"24705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.5"	""	"36.4"	""	"39.8"	""	"42.5"	""	"47.4"	"55.4"	""	"1120"	"26"	"37.000"	"30.000"	"0.130974885364924"	"19"	"0.0002277"	"0.001296"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFGIFNQK"	"[R].yEFGIFNQk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"535.30042"	"1603.88669"	"1603.88845"	"-1.10"	"-0.00059"	"7/68"	"7"	"68"	"7050981.66436768"	"HCD"	"MS2"	"27.57142"	"194.2"	"100.000"	"56.8250"	"17607"	"17607"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"313.7"	""	"278.5"	""	"284.3"	""	"253.9"	"2.9"	"289.8"	"413.9"	""	"1117"	"42"	"37.000"	"30.000"	"0.00362262331136691"	"29"	"0.0003571"	"0.001513"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFGIFNQK"	"[R].yEFGIFNQk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"802.44781"	"1603.88835"	"1603.88845"	"-0.06"	"-0.00005"	"8/68"	"8"	"68"	"6060405.53613281"	"HCD"	"MS2"	"0"	"533.1"	"100.000"	"57.0905"	"17769"	"17769"	"17749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"864.0"	""	"744.4"	""	"788.9"	""	"632.8"	"1.5"	"800.7"	"1213.2"	""	"1094"	"52"	"37.000"	"30.000"	"0.000315491255475561"	"22"	"0.0001308"	"0.0002471"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFGIFNQK"	"[R].yEFGIFNQk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"535.30121"	"1603.88907"	"1603.88845"	"0.39"	"0.00021"	"9/68"	"9"	"68"	"1538813.30950928"	"HCD"	"MS2"	"20.05696"	"68.0"	"100.000"	"57.1422"	"17737"	"17737"	"17707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.7"	""	"76.8"	""	"89.8"	""	"127.2"	""	"130.9"	"137.8"	""	"1110"	"15"	"37.000"	"30.000"	"1.93772875090615"	"19"	"0.0008125"	"0.00746"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFGIFNQK"	"[R].yEFGIFNQk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"535.30145"	"1603.88980"	"1603.88845"	"0.84"	"0.00045"	"7/68"	"7"	"68"	"8976949.89746094"	"HCD"	"MS2"	"11.6695"	"227.2"	"100.000"	"57.0580"	"17756"	"17756"	"17733"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"382.9"	""	"329.5"	""	"330.3"	""	"285.5"	"0.1"	"332.8"	"488.2"	""	"1127"	"42"	"37.000"	"30.000"	"0.00349055045805766"	"30"	"0.0001889"	"0.0008041"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFGIFNQK"	"[R].yEFGIFNQk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09812; P53534"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"802.44922"	"1603.89116"	"1603.88845"	"1.69"	"0.00136"	"8/68"	"8"	"68"	"5827415.97418213"	"HCD"	"MS2"	"0"	"521.6"	"100.000"	"56.8756"	"17628"	"17628"	"17611"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"861.0"	""	"751.9"	""	"758.8"	""	"660.5"	"0.5"	"718.4"	"1182.6"	""	"1131"	"52"	"37.000"	"30.000"	"0.000333758710837178"	"21"	"0.0001308"	"0.0002066"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YATALYSAASK"	"[R].yATALYSAASk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"802.45758"	"1603.90788"	"1603.90958"	"-1.06"	"-0.00085"	"10/94"	"10"	"94"	"1911276.51062012"	"HCD"	"MS2"	"0"	"154.6"	"100.000"	"42.2740"	"11747"	"11747"	"11731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.3"	""	"210.5"	""	"221.5"	""	"268.8"	""	"303.7"	"303.5"	""	"1007"	"66"	"37.000"	"30.000"	"1.14551155639374E-05"	"28"	"0"	"6.375E-06"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YATALYSAASK"	"[R].yATALYSAASk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"802.45850"	"1603.90972"	"1603.90958"	"0.08"	"0.00007"	"10/94"	"10"	"94"	"3077400.07537842"	"HCD"	"MS2"	"0"	"237.8"	"100.000"	"42.0881"	"11627"	"11627"	"11607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.0"	""	"333.7"	""	"342.5"	""	"389.2"	""	"456.3"	"474.0"	""	"1019"	"65"	"37.000"	"30.000"	"1.58907424309586E-05"	"26"	"0"	"1.056E-05"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSPFGPAGTGK"	"[R].lGGSPFGPAGTGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"802.46381"	"1603.92034"	"1603.92081"	"-0.30"	"-0.00024"	"12/110"	"12"	"110"	"6058792.38409424"	"HCD"	"MS2"	"0"	"397.1"	"100.000"	"42.6043"	"11882"	"11882"	"11859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"507.5"	""	"528.0"	""	"538.7"	""	"677.1"	"6.6"	"746.5"	"760.3"	""	"971"	"72"	"36.000"	"29.000"	"2.89193970683334E-06"	""	"0"	"1.755E-06"	"1.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSPFGPAGTGK"	"[R].lGGSPFGPAGTGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7671"	"0.0000"	"1"	"1"	"1"	"802.46387"	"1603.92046"	"1603.92081"	"-0.22"	"-0.00018"	"12/110"	"12"	"110"	"6321246.18157959"	"HCD"	"MS2"	"0"	"465.1"	"100.000"	"42.4122"	"11759"	"11759"	"11740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"589.9"	""	"574.4"	""	"672.8"	""	"791.2"	""	"875.5"	"908.6"	""	"971"	"73"	"36.000"	"29.000"	"2.61329979411658E-06"	""	"0"	"1.159E-06"	"1.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVSWNGPFKTK"	"[R].lPVSWnGPFKTK.[E]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"1"	"2"	"2"	"0.1296"	"0.0000"	"1"	"1"	"1"	"802.46564"	"1603.92400"	"1603.90455"	"12.13"	"0.00973"	"9/114"	"9"	"114"	"1247958.61706543"	"HCD"	"MS2"	"23.26527"	"78.2"	"100.000"	"68.0951"	"22198"	"22198"	"22170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.8"	""	"105.5"	""	"104.4"	""	"129.4"	"0.9"	"144.4"	"152.0"	""	"970"	"54"	"36.000"	"29.000"	"0.000215646164722517"	""	"0.002711"	"0.04124"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVSWNGPFKTK"	"[R].lPVSWnGPFKTK.[E]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"1"	"3"	"3"	"0.1500"	"0.0000"	"1"	"1"	"1"	"535.31299"	"1603.92441"	"1603.90455"	"12.39"	"0.00662"	"12/114"	"12"	"114"	"1957825.30224609"	"HCD"	"MS2"	"21.30731"	"53.1"	"100.000"	"68.1344"	"22214"	"22214"	"22186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.9"	""	"74.3"	""	"74.4"	""	"93.5"	"1.4"	"101.1"	"90.5"	""	"970"	"40"	"36.000"	"29.000"	"0.00526916427454276"	""	"0.001783"	"0.02508"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVSWNGPFKTK"	"[R].lPVSWnGPFKTK.[E]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"1"	"3"	"3"	"0.1333"	"0.0000"	"1"	"1"	"1"	"535.31311"	"1603.92478"	"1603.90455"	"12.61"	"0.00674"	"12/114"	"12"	"114"	"2059094.72729492"	"HCD"	"MS2"	"4.119344"	"54.0"	"100.000"	"68.0523"	"22232"	"22232"	"22202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.6"	""	"68.3"	""	"79.7"	""	"79.9"	"1.0"	"93.4"	"109.5"	""	"959"	"45"	"36.000"	"29.000"	"0.00149895505653594"	""	"0.002981"	"0.05602"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPNGLLVYQGK"	"[R].gPNGLLVYQGk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"802.48059"	"1603.95391"	"1603.95720"	"-2.05"	"-0.00165"	"8/98"	"8"	"98"	"1395853.28570557"	"HCD"	"MS2"	"0"	"117.6"	"100.000"	"43.7036"	"12278"	"12278"	"12250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.6"	""	"152.1"	""	"167.1"	""	"185.4"	"0.0"	"239.6"	"202.8"	""	"772"	"46"	"35.000"	"28.000"	"0.00108040678937886"	"20"	"0"	"3.887E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPNGLLVYQGK"	"[R].gPNGLLVYQGk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"802.48254"	"1603.95781"	"1603.95720"	"0.38"	"0.00031"	"8/98"	"8"	"98"	"815681.56036377"	"HCD"	"MS2"	"0"	"78.7"	"100.000"	"44.0866"	"12483"	"12483"	"12460"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.3"	""	"115.5"	""	"113.6"	""	"121.0"	""	"168.7"	"131.1"	""	"742"	"39"	"35.000"	"28.000"	"0.00510944712959654"	"19"	"0.0001859"	"0.0003689"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPNGLLVYQGK"	"[R].gPNGLLVYQGk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"802.48279"	"1603.95830"	"1603.95720"	"0.69"	"0.00055"	"9/98"	"9"	"98"	"1324346.21136475"	"HCD"	"MS2"	"0"	"100.5"	"100.000"	"43.7795"	"12358"	"12358"	"12332"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.8"	""	"130.2"	""	"144.1"	""	"171.6"	""	"195.7"	"183.6"	""	"742"	"39"	"35.000"	"28.000"	"0.00438908417174036"	"18"	"0"	"0.0001055"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPNGLLVYQGK"	"[R].gPNGLLVYQGk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.48712"	"1603.96697"	"1603.95720"	"6.09"	"0.00488"	"13/98"	"13"	"98"	"900675.402893066"	"HCD"	"MS2"	"0"	"93.9"	"100.000"	"43.8938"	"12355"	"12355"	"12327"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.2"	""	"149.4"	""	"127.4"	""	"149.6"	""	"165.5"	"174.3"	""	"701"	"23"	"35.000"	"28.000"	"0.188229644627774"	"14"	"0.0006037"	"0.00553"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDPNAPK"	"[K].fkDPNAPk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"535.32971"	"1603.97458"	"1603.97749"	"-1.81"	"-0.00097"	"5/68"	"5"	"68"	"11704166.7414551"	"HCD"	"MS2"	"9.187917"	"494.8"	"73.984"	"31.5069"	"7348"	"7348"	"7327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"715.4"	""	"724.4"	""	"776.1"	""	"770.8"	""	"835.4"	"864.0"	""	"565"	"10"	"34.000"	"27.000"	"2.86429966470612"	"16"	"0.0004166"	"0.002172"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDPNAPK"	"[K].fkDPNAPk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.32990"	"1603.97513"	"1603.97749"	"-1.47"	"-0.00079"	"5/68"	"5"	"68"	"10150677.7781982"	"HCD"	"MS2"	"7.635905"	"541.3"	"90.823"	"31.3925"	"7259"	"7259"	"7238"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"782.3"	""	"752.6"	""	"848.6"	""	"877.0"	""	"953.2"	"913.3"	""	"565"	"8"	"34.000"	"27.000"	"4.89799629365544"	"13"	"0.0004166"	"0.002303"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDPNAPK"	"[K].fkDPNAPk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.32990"	"1603.97513"	"1603.97749"	"-1.47"	"-0.00079"	"4/68"	"4"	"68"	"38717182.2423096"	"HCD"	"MS2"	"8.021152"	"1945.1"	"89.158"	"31.0915"	"7136"	"7136"	"7110"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3108.6"	""	"3269.1"	""	"3253.6"	""	"3138.4"	""	"2815.9"	"2781.5"	""	"565"	"9"	"34.000"	"27.000"	"3.62258389600326"	"13"	"0.0006037"	"0.00551"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDPNAPK"	"[K].fkDPNAPk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.33014"	"1603.97586"	"1603.97749"	"-1.01"	"-0.00054"	"11/68"	"11"	"68"	"24241193.147522"	"HCD"	"MS2"	"5.616779"	"1354.1"	"100.000"	"31.1810"	"7215"	"7215"	"7184"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2134.1"	""	"2289.8"	""	"2217.6"	""	"2218.9"	""	"2031.1"	"1906.7"	""	"560"	"3"	"34.000"	"27.000"	"13.1267747000674"	"13"	"0.0006037"	"0.005384"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDPNAPK"	"[K].fkDPNAPk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"802.49261"	"1603.97795"	"1603.97749"	"0.29"	"0.00023"	"4/68"	"4"	"68"	"535161.239074707"	"HCD"	"MS2"	"0"	"44.8"	"100.000"	"31.2934"	"7261"	"7261"	"7232"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.8"	""	"74.0"	""	"74.3"	""	"73.9"	"1.3"	"59.4"	"61.5"	""	"619"	"15"	"34.000"	"27.000"	"0.936829705997354"	"17"	"0.006061"	"0.2138"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFQVLDAVK"	"[R].lIFQVLDAVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63450"	"Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus OX=10116 GN=Camk1 PE=1 SV=2"	"Q63450"	"Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus OX=10116 GN=Camk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.51221"	"1604.01714"	"1604.01874"	"-1.00"	"-0.00080"	"6/84"	"6"	"84"	"102211.313659668"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"87.3323"	"30025"	"30025"	"29997"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"8.2"	""	"11.1"	""	"13.5"	""	"12.7"	"14.1"	""	"320"	"9"	"32.000"	"25.000"	"1.91038096714283"	"13"	"0.002651"	"0.03974"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFQVLDAVK"	"[R].lIFQVLDAVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63450"	"Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus OX=10116 GN=Camk1 PE=1 SV=2"	"Q63450"	"Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus OX=10116 GN=Camk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.51263"	"1604.01799"	"1604.01874"	"-0.46"	"-0.00037"	"7/84"	"7"	"84"	"92638.834777832"	"HCD"	"MS2"	"20.64879"	"6.5"	"100.000"	"87.4372"	"30118"	"30118"	"30103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.2"	""	"7.5"	""	"11.9"	""	"10.4"	""	"11.2"	"11.1"	""	"306"	"15"	"31.000"	"24.000"	"0.483828482005762"	"13"	"0.002683"	"0.04005"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVLLMPNGPMR"	"[K].fTVLLMPNGPMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"802.94568"	"1604.88408"	"1604.88541"	"-0.83"	"-0.00066"	"7/96"	"7"	"96"	"378936.420593262"	"HCD"	"MS2"	"55.83778"	"28.1"	"100.000"	"69.1800"	"22692"	"22692"	"22666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.0"	""	"43.5"	""	"48.6"	""	"27.9"	""	"59.2"	"53.1"	""	"1090"	"7"	"37.000"	"30.000"	"10.5050107768906"	"15"	"0.002393"	"0.03524"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSLYYTGEK"	"[R].sVSLYYTGEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"802.95056"	"1604.89385"	"1604.89359"	"0.16"	"0.00013"	"16/88"	"16"	"88"	"1730119.796875"	"HCD"	"MS2"	"0"	"156.6"	"100.000"	"41.6736"	"11460"	"11460"	"11435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"219.1"	""	"165.9"	""	"197.3"	""	"286.4"	"1.0"	"290.3"	"325.6"	""	"1083"	"52"	"37.000"	"30.000"	"0.000313039009670196"	"20"	"0"	"3.326E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSLYYTGEK"	"[R].sVSLYYTGEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"802.95062"	"1604.89397"	"1604.89359"	"0.23"	"0.00019"	"7/88"	"7"	"88"	"1790734.97955322"	"HCD"	"MS2"	"0"	"154.5"	"100.000"	"41.8708"	"11585"	"11585"	"11554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.1"	""	"176.9"	""	"205.2"	""	"269.7"	""	"297.1"	"311.4"	""	"1103"	"31"	"37.000"	"30.000"	"0.0452423876697894"	"22"	"0"	"8.003E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTAEAFGFK"	"[K].yLTAEAFGFk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"535.64069"	"1604.90750"	"1604.90885"	"-0.84"	"-0.00045"	"8/76"	"8"	"76"	"3585091.71630859"	"HCD"	"MS2"	"6.438491"	"99.4"	"100.000"	"64.3033"	"20710"	"20710"	"20691"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"172.5"	""	"137.7"	""	"171.7"	""	"134.7"	"1.3"	"142.9"	"177.9"	""	"1000"	"40"	"36.000"	"30.000"	"0.00501152619038949"	"25"	"0"	"3.401E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTAEAFGFK"	"[K].yLTAEAFGFk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"802.95764"	"1604.90801"	"1604.90885"	"-0.53"	"-0.00042"	"9/76"	"9"	"76"	"2353639.59295654"	"HCD"	"MS2"	"39.28555"	"195.2"	"100.000"	"64.3026"	"20657"	"20657"	"20633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.8"	""	"275.1"	""	"321.1"	""	"316.3"	"1.0"	"290.3"	"339.4"	""	"971"	"47"	"36.000"	"29.000"	"0.000910309833666731"	"23"	"0"	"4.278E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTAEAFGFK"	"[K].yLTAEAFGFk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"802.95770"	"1604.90813"	"1604.90885"	"-0.45"	"-0.00036"	"8/76"	"8"	"76"	"2266333.79144287"	"HCD"	"MS2"	"26.6687"	"197.3"	"100.000"	"64.3472"	"20728"	"20728"	"20707"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"326.5"	""	"288.0"	""	"326.1"	""	"293.4"	"2.8"	"283.8"	"342.9"	""	"971"	"51"	"36.000"	"29.000"	"0.000432702330463933"	"22"	"0"	"3.407E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTAEAFGFK"	"[K].yLTAEAFGFk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"535.64142"	"1604.90970"	"1604.90885"	"0.53"	"0.00028"	"11/76"	"11"	"76"	"2847881.12084961"	"HCD"	"MS2"	"0"	"85.5"	"100.000"	"64.2336"	"20629"	"20629"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.3"	""	"117.3"	""	"143.0"	""	"130.9"	""	"128.2"	"149.6"	""	"981"	"32"	"36.000"	"29.000"	"0.0284209775597385"	"26"	"0.0001308"	"0.0002536"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVDIPAAASFK"	"[R].gAVDIPAAASFk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"535.65143"	"1604.93973"	"1604.94121"	"-0.92"	"-0.00049"	"15/100"	"15"	"100"	"9223788.34112549"	"HCD"	"MS2"	"23.31001"	"250.4"	"94.215"	"49.4134"	"14608"	"14608"	"14591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"347.4"	""	"326.7"	""	"316.1"	""	"412.5"	""	"479.3"	"493.5"	""	"843"	"47"	"36.000"	"29.000"	"0.000839068812383099"	"22"	"0"	"1.787E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVDIPAAASFK"	"[R].gAVDIPAAASFk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.8916"	"0.0000"	"1"	"1"	"1"	"802.97394"	"1604.94060"	"1604.94121"	"-0.38"	"-0.00031"	"10/100"	"10"	"100"	"2856476.9720459"	"HCD"	"MS2"	"0"	"202.9"	"100.000"	"49.3560"	"14584"	"14584"	"14559"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.6"	""	"275.1"	""	"261.1"	""	"327.2"	""	"360.2"	"370.8"	""	"843"	"83"	"36.000"	"29.000"	"2.21206344495279E-07"	"27"	"0"	"1.096E-06"	"1.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVDIPAAASFK"	"[R].gAVDIPAAASFk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"802.97473"	"1604.94219"	"1604.94121"	"0.61"	"0.00049"	"10/100"	"10"	"100"	"3113992.11303711"	"HCD"	"MS2"	"0"	"227.1"	"100.000"	"49.6668"	"14754"	"14754"	"14734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"360.9"	""	"297.5"	""	"314.8"	""	"369.3"	"0.9"	"383.2"	"422.8"	""	"854"	"78"	"36.000"	"29.000"	"7.5932530808662E-07"	"27"	"0"	"1.507E-06"	"1.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVDIPAAASFK"	"[R].gAVDIPAAASFk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"535.65234"	"1604.94248"	"1604.94121"	"0.79"	"0.00042"	"15/100"	"15"	"100"	"9692734.60083008"	"HCD"	"MS2"	"30.92708"	"286.2"	"100.000"	"49.6637"	"14753"	"14753"	"14734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.6"	""	"367.5"	""	"378.1"	""	"455.4"	"0.6"	"526.8"	"558.0"	""	"842"	"44"	"36.000"	"29.000"	"0.00169543871451018"	"22"	"0"	"2.229E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGLDNAGK"	"[K].lVFLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"3"	"3"	"0.8246"	"0.0000"	"1"	"1"	"1"	"535.66278"	"1604.97379"	"1604.97760"	"-2.37"	"-0.00127"	"8/86"	"8"	"86"	"2675569.69226074"	"HCD"	"MS2"	"45.27729"	"75.8"	"100.000"	"67.0496"	"21779"	"21779"	"21753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.2"	""	"108.0"	""	"127.7"	""	"125.2"	"0.3"	"124.9"	"124.7"	""	"632"	"57"	"34.000"	"28.000"	"5.84368883597073E-05"	"26"	"0"	"7.496E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGLDNAGK"	"[K].lVFLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"2"	"2"	"0.9322"	"0.0000"	"1"	"1"	"1"	"802.99060"	"1604.97392"	"1604.97760"	"-2.29"	"-0.00184"	"10/86"	"10"	"86"	"980369.992736816"	"HCD"	"MS2"	"0"	"83.7"	"100.000"	"67.6951"	"22035"	"22035"	"22015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.1"	""	"132.2"	""	"124.9"	""	"126.3"	"0.3"	"136.4"	"141.0"	""	"630"	"59"	"34.000"	"27.000"	"4.09553417080486E-05"	"21"	"0"	"6.608E-06"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIDELYLPR"	"[R].kIDELYLPR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"1"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"535.66290"	"1604.97416"	"1604.97760"	"-2.15"	"-0.00115"	"6/82"	"6"	"82"	"8866133.92974854"	"HCD"	"MS2"	"0"	"296.3"	"74.754"	"42.0979"	"11677"	"11677"	"11663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"441.1"	""	"404.8"	""	"418.2"	""	"584.5"	"4.1"	"477.3"	"471.6"	""	"623"	"16"	"34.000"	"27.000"	"0.747236454274572"	"14"	"0.0001889"	"0.0006703"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGLDNAGK"	"[K].lVFLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"535.66302"	"1604.97452"	"1604.97760"	"-1.92"	"-0.00103"	"7/86"	"7"	"86"	"3902741.02557373"	"HCD"	"MS2"	"50.19484"	"104.6"	"100.000"	"67.2823"	"21918"	"21918"	"21906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.3"	""	"144.3"	""	"178.9"	""	"170.4"	""	"182.1"	"173.8"	""	"623"	"35"	"34.000"	"27.000"	"0.00884011777359545"	"21"	"0.0001859"	"0.0003728"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGLDNAGK"	"[K].lVFLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.66315"	"1604.97489"	"1604.97760"	"-1.69"	"-0.00090"	"11/86"	"11"	"86"	"3566647.45715332"	"HCD"	"MS2"	"0"	"97.2"	"100.000"	"67.3313"	"21891"	"21891"	"21877"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.5"	""	"145.3"	""	"155.6"	""	"156.8"	""	"170.4"	"154.9"	""	"622"	"35"	"34.000"	"27.000"	"0.00884627404416301"	"15"	"0.0001889"	"0.00049"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPVNSVNILK"	"[R].yPVNSVNILk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"802.99115"	"1604.97502"	"1604.97760"	"-1.61"	"-0.00129"	"9/84"	"9"	"84"	"1322232.5123291"	"HCD"	"MS2"	"0"	"99.5"	"100.000"	"50.1716"	"14909"	"14909"	"14899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"138.5"	""	"135.0"	""	"141.8"	""	"166.3"	"0.9"	"174.9"	"184.6"	""	"620"	"53"	"34.000"	"27.000"	"0.000173924872570066"	""	"0"	"3.242E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGLDNAGK"	"[K].lVFLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"3"	"3"	"0.8431"	"0.0000"	"1"	"1"	"1"	"535.66327"	"1604.97525"	"1604.97760"	"-1.46"	"-0.00078"	"8/86"	"8"	"86"	"3094838.45513916"	"HCD"	"MS2"	"0"	"89.2"	"100.000"	"67.6189"	"22004"	"22004"	"21985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.8"	""	"121.2"	""	"142.3"	""	"140.3"	""	"148.9"	"158.2"	""	"620"	"51"	"34.000"	"27.000"	"0.000219969108068651"	"24"	"0"	"0.0001052"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGLDNAGK"	"[K].lVFLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.99133"	"1604.97539"	"1604.97760"	"-1.38"	"-0.00110"	"9/86"	"9"	"86"	"1429333.97393799"	"HCD"	"MS2"	"100"	"105.2"	"100.000"	"67.0050"	"21813"	"21813"	"21795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.4"	""	"161.7"	""	"170.2"	""	"167.7"	""	"179.1"	"171.5"	""	"620"	"43"	"34.000"	"27.000"	"0.00148375328620018"	"15"	"0"	"4.755E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIDELYLPR"	"[R].kIDELYLPR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.66333"	"1604.97544"	"1604.97760"	"-1.35"	"-0.00072"	"8/82"	"8"	"82"	"8422873.65856934"	"HCD"	"MS2"	"57.47228"	"381.0"	"100.000"	"41.8614"	"11536"	"11536"	"11518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"519.8"	""	"509.6"	""	"543.0"	""	"715.5"	"5.3"	"639.8"	"673.4"	""	"620"	"6"	"34.000"	"27.000"	"8.02346003697458"	"13"	"0.0005564"	"0.003509"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGLDNAGK"	"[K].lVFLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"535.66357"	"1604.97617"	"1604.97760"	"-0.89"	"-0.00048"	"7/86"	"7"	"86"	"2926441.72369385"	"HCD"	"MS2"	"37.34539"	"82.0"	"100.000"	"66.9500"	"21791"	"21791"	"21763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.3"	""	"118.0"	""	"126.6"	""	"127.4"	""	"141.6"	"135.3"	""	"580"	"51"	"34.000"	"27.000"	"0.000252579441087263"	"21"	"0"	"0.0001711"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPVNSVNILK"	"[R].yPVNSVNILk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"802.99182"	"1604.97637"	"1604.97760"	"-0.77"	"-0.00062"	"8/84"	"8"	"84"	"1131321.29309082"	"HCD"	"MS2"	"100"	"90.0"	"100.000"	"50.3423"	"15029"	"15029"	"15012"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.7"	""	"112.9"	""	"113.0"	""	"141.0"	""	"172.7"	"180.2"	""	"580"	"43"	"34.000"	"27.000"	"0.00134399606723523"	"24"	"0"	"0.000107"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGLDNAGK"	"[K].lVFLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.99182"	"1604.97637"	"1604.97760"	"-0.77"	"-0.00062"	"10/86"	"10"	"86"	"1531030.68280029"	"HCD"	"MS2"	"100"	"119.6"	"100.000"	"67.0450"	"21777"	"21777"	"21753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.9"	""	"176.4"	""	"190.6"	""	"194.2"	""	"204.1"	"194.9"	""	"580"	"36"	"34.000"	"27.000"	"0.00725100154891965"	"15"	"0"	"3.968E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPVNSVNILK"	"[R].yPVNSVNILk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"802.99194"	"1604.97661"	"1604.97760"	"-0.62"	"-0.00049"	"9/84"	"9"	"84"	"2338794.33215332"	"HCD"	"MS2"	"0"	"142.9"	"100.000"	"50.4694"	"15029"	"15029"	"15015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.9"	""	"178.8"	""	"195.9"	""	"244.7"	"2.1"	"261.2"	"261.1"	""	"579"	"47"	"34.000"	"27.000"	"0.00060764309630901"	"22"	"0"	"3.095E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGLDNAGK"	"[K].lVFLGLDNAGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"802.99213"	"1604.97698"	"1604.97760"	"-0.39"	"-0.00031"	"17/86"	"17"	"86"	"1324533.81750488"	"HCD"	"MS2"	"16.73892"	"104.7"	"100.000"	"67.5619"	"22031"	"22031"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.2"	""	"159.1"	""	"157.3"	""	"163.6"	"0.1"	"181.7"	"165.5"	""	"558"	"66"	"34.000"	"27.000"	"6.33292293675586E-06"	"25"	"0"	"6.266E-06"	"1.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPVNSVNILK"	"[R].yPVNSVNILk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"802.99213"	"1604.97698"	"1604.97760"	"-0.39"	"-0.00031"	"9/84"	"9"	"84"	"2512269.4932251"	"HCD"	"MS2"	"0"	"170.6"	"100.000"	"50.6401"	"15149"	"15149"	"15132"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"245.4"	""	"226.5"	""	"236.4"	""	"288.4"	""	"319.5"	"304.1"	""	"558"	"33"	"34.000"	"27.000"	"0.0139509635258577"	"20"	"0"	"8.736E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKEWVDK"	"[K].ikEWVDk.[S]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.67065"	"1604.99741"	"1604.99789"	"-0.30"	"-0.00016"	"4/64"	"4"	"64"	"10483090.5685425"	"HCD"	"MS2"	"36.06623"	"378.4"	"59.444"	"40.7884"	"11141"	"11141"	"11117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"671.4"	""	"563.0"	""	"594.2"	""	"546.9"	"4.6"	"601.4"	"593.4"	""	"427"	"3"	"33.000"	"26.000"	"9.55867904416534"	"13"	"0.0006037"	"0.004371"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKEWVDK"	"[K].ikEWVDk.[S]"	"N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.67072"	"1604.99759"	"1604.99789"	"-0.19"	"-0.00010"	"7/64"	"7"	"64"	"10297355.7124634"	"HCD"	"MS2"	"27.8379"	"448.7"	"72.574"	"40.6027"	"11021"	"11021"	"10997"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"806.5"	""	"662.7"	""	"701.3"	""	"641.0"	"3.6"	"708.1"	"715.3"	""	"427"	"1"	"33.000"	"26.000"	"17.8401244392371"	"13"	"0.002829"	"0.04644"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVLLMPNGPMR"	"[K].fTVLLMPnGPMR.[I]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"803.43768"	"1605.86809"	"1605.86942"	"-0.83"	"-0.00067"	"13/96"	"13"	"96"	"549066.741149902"	"HCD"	"MS2"	"100"	"25.2"	"100.000"	"72.6778"	"24120"	"24120"	"24095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.7"	""	"39.9"	""	"32.3"	""	"27.2"	"1.3"	"50.9"	"50.6"	""	"1069"	"20"	"37.000"	"30.000"	"0.505763762750017"	""	"0.0001308"	"0.0002232"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVLLMPNGPMR"	"[K].fTVLLMPnGPMR.[I]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"803.43860"	"1605.86992"	"1605.86942"	"0.31"	"0.00025"	"15/96"	"15"	"96"	"547004.128112793"	"HCD"	"MS2"	"0"	"30.3"	"100.000"	"72.7003"	"24078"	"24078"	"24049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.1"	""	"47.8"	""	"42.0"	""	"37.5"	""	"55.4"	"58.2"	""	"1053"	"31"	"37.000"	"30.000"	"0.0407754136543026"	"26"	"0.0001859"	"0.0003508"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPEVFLSK"	"[R].tQVPEVFLSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"803.48267"	"1605.95806"	"1605.96161"	"-2.22"	"-0.00178"	"8/104"	"8"	"104"	"1160050.96728516"	"HCD"	"MS2"	"0"	"90.7"	"100.000"	"53.8944"	"16465"	"16465"	"16446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.0"	""	"110.2"	""	"109.0"	""	"165.9"	""	"170.9"	"163.0"	""	"687"	"36"	"35.000"	"28.000"	"0.00808959429018279"	"17"	"0.0004166"	"0.002506"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPEVFLSK"	"[R].tQVPEVFLSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"535.99097"	"1605.95835"	"1605.96161"	"-2.03"	"-0.00109"	"8/104"	"8"	"104"	"6139962.61090088"	"HCD"	"MS2"	"16.00984"	"196.7"	"100.000"	"53.6196"	"16302"	"16302"	"16291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"288.0"	""	"299.9"	""	"301.2"	""	"288.1"	""	"339.8"	"344.9"	""	"680"	"22"	"35.000"	"28.000"	"0.212069844064022"	"15"	"0.0001889"	"0.0007434"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPEVFLSK"	"[R].tQVPEVFLSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"803.48291"	"1605.95854"	"1605.96161"	"-1.91"	"-0.00154"	"8/104"	"8"	"104"	"1383972.37908936"	"HCD"	"MS2"	"0"	"106.7"	"100.000"	"53.4480"	"16292"	"16292"	"16281"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.2"	""	"129.7"	""	"130.1"	""	"192.0"	"0.7"	"184.6"	"195.4"	""	"680"	"56"	"35.000"	"28.000"	"8.40386209305484E-05"	"19"	"0"	"3.758E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPEVFLSK"	"[R].tQVPEVFLSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"803.48303"	"1605.95879"	"1605.96161"	"-1.76"	"-0.00141"	"9/104"	"9"	"104"	"1520211.35961914"	"HCD"	"MS2"	"0"	"113.8"	"100.000"	"53.3081"	"16182"	"16182"	"16171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.8"	""	"130.3"	""	"146.4"	""	"229.1"	"3.9"	"181.7"	"191.1"	""	"675"	"49"	"35.000"	"28.000"	"0.000452140882006253"	"24"	"0"	"3.959E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPEVFLSK"	"[R].tQVPEVFLSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"535.99139"	"1605.95963"	"1605.96161"	"-1.24"	"-0.00066"	"11/104"	"11"	"104"	"4375795.19500732"	"HCD"	"MS2"	"36.81355"	"139.2"	"100.000"	"53.5531"	"16333"	"16333"	"16326"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.9"	""	"178.2"	""	"190.8"	""	"262.5"	"0.4"	"230.7"	"246.1"	""	"652"	"42"	"35.000"	"28.000"	"0.00217880117127368"	"19"	"0"	"0.0001274"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPEVFLSK"	"[R].tQVPEVFLSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"535.99146"	"1605.95981"	"1605.96161"	"-1.12"	"-0.00060"	"10/104"	"10"	"104"	"6115457.67852783"	"HCD"	"MS2"	"48.53169"	"189.9"	"100.000"	"53.8371"	"16442"	"16442"	"16430"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.4"	""	"279.4"	""	"294.7"	""	"290.4"	""	"317.5"	"333.6"	""	"634"	"24"	"35.000"	"28.000"	"0.123327310963187"	"15"	"0.0001889"	"0.000638"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPEVFLSK"	"[R].tQVPEVFLSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"535.99158"	"1605.96018"	"1605.96161"	"-0.89"	"-0.00048"	"10/104"	"10"	"104"	"4155219.56610107"	"HCD"	"MS2"	"42.96818"	"136.9"	"100.000"	"53.3493"	"16198"	"16198"	"16185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"211.0"	""	"165.7"	""	"163.6"	""	"251.7"	"0.1"	"257.2"	"248.4"	""	"632"	"33"	"34.000"	"28.000"	"0.0157284918853344"	"18"	"7.476E-05"	"0.0001919"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPEVFLSK"	"[R].tQVPEVFLSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"803.48547"	"1605.96367"	"1605.96161"	"1.28"	"0.00103"	"8/104"	"8"	"104"	"1627976.77813721"	"HCD"	"MS2"	"0"	"119.6"	"100.000"	"53.6057"	"16296"	"16296"	"16286"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.0"	""	"144.4"	""	"164.6"	""	"233.5"	"0.4"	"203.9"	"207.8"	""	"619"	"50"	"34.000"	"27.000"	"0.000295570205373634"	"21"	"0.0001859"	"0.0003276"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNVPVIGGHAGK"	"[R].vNVPVIGGHAGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.99921"	"1605.98307"	"1605.98408"	"-0.63"	"-0.00034"	"16/110"	"16"	"110"	"110015333.621094"	"HCD"	"MS2"	"12.09038"	"263.7"	"8.900"	"36.6564"	"9448"	"9448"	"9431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"422.8"	""	"352.6"	""	"404.4"	""	"386.4"	"1.5"	"435.4"	"492.0"	""	"500"	"52"	"33.000"	"26.000"	"0.000176173267241787"	"16"	"0"	"4.863E-06"	"1.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNVPVIGGHAGK"	"[R].vNVPVIGGHAGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.99945"	"1605.98380"	"1605.98408"	"-0.18"	"-0.00009"	"10/110"	"10"	"110"	"98029582.637207"	"HCD"	"MS2"	"10.5645"	"291.3"	"11.440"	"36.5765"	"9372"	"9372"	"9354"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"468.8"	"2.0"	"389.6"	""	"451.2"	""	"446.4"	"4.7"	"487.6"	"505.4"	""	"488"	"69"	"33.000"	"26.000"	"2.8866213959694E-06"	"17"	"0"	"1.732E-06"	"1.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNVPVIGGHAGK"	"[R].vNVPVIGGHAGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.49683"	"1605.98638"	"1605.98408"	"1.43"	"0.00115"	"14/110"	"14"	"110"	"540044.133789063"	"HCD"	"MS2"	"0"	"41.7"	"100.000"	"36.6063"	"9385"	"9385"	"9354"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.1"	""	"58.4"	""	"57.1"	""	"52.9"	""	"71.5"	"86.2"	""	"437"	"46"	"33.000"	"26.000"	"0.000585398278972959"	"15"	"0.0001308"	"0.0002903"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STMKPVQK"	"[R].sTMkPVQk.[V]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"536.00226"	"1605.99222"	"1605.99651"	"-2.67"	"-0.00143"	"6/66"	"6"	"66"	"21453047.9013062"	"HCD"	"MS2"	"0"	"1494.4"	"100.000"	"28.3598"	"6098"	"6098"	"6071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2522.3"	""	"2046.5"	""	"1975.2"	""	"1607.3"	""	"2889.1"	"3158.2"	""	"423"	"0"	"33.000"	"26.000"	"20.5262858072421"	"13"	"0.003976"	"0.1013"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STMKPVQK"	"[R].sTMkPVQk.[V]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.00287"	"1605.99405"	"1605.99651"	"-1.53"	"-0.00082"	"9/66"	"9"	"66"	"22928448.3699341"	"HCD"	"MS2"	"0"	"1698.9"	"100.000"	"28.2783"	"6029"	"6029"	"6008"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3015.1"	""	"2266.5"	""	"2205.2"	""	"1749.1"	""	"3230.3"	"3645.0"	""	"427"	"1"	"33.000"	"26.000"	"15.8269736517746"	"13"	"0.0001889"	"0.0007576"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STMKPVQK"	"[R].sTMkPVQk.[V]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.50140"	"1605.99553"	"1605.99651"	"-0.61"	"-0.00049"	"7/66"	"7"	"66"	"226331.338195801"	"HCD"	"MS2"	"0"	"24.5"	"100.000"	"28.3653"	"6064"	"6064"	"6046"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.0"	""	"29.8"	""	"28.1"	""	"35.4"	"1.6"	"50.6"	"48.7"	""	"414"	"10"	"33.000"	"26.000"	"2.26970986601639"	"13"	"0.00175"	"0.02405"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLMLADQMISR"	"[K].tVLMLADQMISR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"803.94495"	"1606.88262"	"1606.88580"	"-1.98"	"-0.00159"	"8/116"	"8"	"116"	"692002.28918457"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"71.6897"	"23665"	"23665"	"23635"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.0"	""	"57.4"	""	"55.0"	""	"55.5"	""	"74.2"	"76.0"	""	"1094"	"17"	"37.000"	"30.000"	"1.11683065573423"	"18"	"0.000523"	"0.003107"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFLPQSAMVK"	"[K].qFLPQSAMVk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"803.97229"	"1606.93730"	"1606.93911"	"-1.12"	"-0.00090"	"9/90"	"9"	"90"	"463372.614685059"	"HCD"	"MS2"	"0"	"42.0"	"100.000"	"47.9792"	"14021"	"14021"	"13992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.7"	""	"47.2"	""	"64.8"	""	"53.9"	"0.1"	"83.6"	"84.4"	""	"838"	"48"	"36.000"	"29.000"	"0.000657982015015759"	"23"	"7.476E-05"	"0.0001887"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFLPQSAMVK"	"[K].qFLPQSAMVk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"803.97339"	"1606.93950"	"1606.93911"	"0.25"	"0.00020"	"6/90"	"6"	"90"	"272392.658203125"	"HCD"	"MS2"	"0"	"28.4"	"100.000"	"48.3618"	"14225"	"14225"	"14197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.7"	""	"39.9"	""	"41.4"	""	"37.8"	""	"49.5"	"55.9"	""	"812"	"19"	"36.000"	"29.000"	"0.467224957911441"	"22"	"0.0003839"	"0.002009"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLASYAQPIFLR"	"[K].vLASYAQPIFLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"803.97864"	"1606.95000"	"1606.95183"	"-1.14"	"-0.00092"	"6/98"	"6"	"98"	"742856.404174805"	"HCD"	"MS2"	"31.27677"	"47.3"	"100.000"	"65.7716"	"21310"	"21310"	"21283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.2"	""	"58.9"	""	"69.5"	""	"73.9"	""	"100.1"	"87.1"	""	"738"	"42"	"35.000"	"28.000"	"0.00249474617919641"	"16"	"0"	"0.0001087"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLASYAQPIFLR"	"[K].vLASYAQPIFLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"803.98010"	"1606.95293"	"1606.95183"	"0.68"	"0.00055"	"6/98"	"6"	"98"	"689193.852783203"	"HCD"	"MS2"	"21.83475"	"46.7"	"100.000"	"65.8421"	"21286"	"21286"	"21257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.7"	""	"55.8"	""	"63.2"	""	"77.2"	"1.4"	"96.5"	"89.4"	""	"720"	"42"	"35.000"	"28.000"	"0.00250785545079877"	"16"	"0"	"7.055E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPEVFLSK"	"[R].tqVPEVFLSk.[V]"	"N-Term(TMT6plex); Q2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.32593"	"1606.96323"	"1606.94563"	"10.95"	"0.00587"	"11/104"	"11"	"104"	"4114122.65795898"	"HCD"	"MS2"	"42.76954"	"127.9"	"100.000"	"53.6402"	"16367"	"16367"	"16355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"200.2"	""	"154.2"	""	"164.5"	""	"227.1"	"2.7"	"232.3"	"230.8"	""	"633"	"19"	"35.000"	"28.000"	"0.392982955352998"	"14"	"0.003286"	"0.07108"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNYDWWYLR"	"[R].yNYDWWYLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"804.39539"	"1607.78349"	"1607.78443"	"-0.58"	"-0.00047"	"5/78"	"5"	"78"	"2984901.0869751"	"HCD"	"MS2"	"0"	"180.6"	"100.000"	"67.1926"	"21883"	"21883"	"21875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.2"	"3.2"	"239.1"	""	"202.6"	""	"315.9"	"3.2"	"362.8"	"411.6"	""	"603"	"22"	"34.000"	"27.000"	"0.182510273738305"	"15"	"0.0001889"	"0.0003921"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNYDWWYLR"	"[R].yNYDWWYLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.39569"	"1607.78411"	"1607.78443"	"-0.20"	"-0.00016"	"6/78"	"6"	"78"	"2016840.77581787"	"HCD"	"MS2"	"14.94887"	"125.7"	"100.000"	"67.4805"	"21998"	"21998"	"21978"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.7"	""	"145.8"	""	"152.1"	""	"215.4"	""	"261.3"	"288.6"	""	"602"	"35"	"34.000"	"27.000"	"0.00860134753555859"	"15"	"0.0001889"	"0.0005009"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNYDWWYLR"	"[R].yNYDWWYLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.39600"	"1607.78472"	"1607.78443"	"0.18"	"0.00014"	"7/78"	"7"	"78"	"1950024.14178467"	"HCD"	"MS2"	"0"	"131.9"	"100.000"	"67.5822"	"21989"	"21989"	"21971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.6"	""	"166.0"	""	"169.3"	""	"211.3"	"2.9"	"273.0"	"278.2"	""	"611"	"31"	"34.000"	"27.000"	"0.0242109156461784"	"14"	"0.0001889"	"0.0004191"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNYDWWYLR"	"[R].yNYDWWYLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"804.39630"	"1607.78533"	"1607.78443"	"0.56"	"0.00045"	"6/78"	"6"	"78"	"2406457.5447998"	"HCD"	"MS2"	"0"	"144.6"	"100.000"	"67.2786"	"21870"	"21870"	"21857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.6"	""	"182.9"	""	"170.0"	""	"267.1"	"0.1"	"294.0"	"309.7"	""	"618"	"38"	"34.000"	"27.000"	"0.00439499595220952"	"16"	"0.0001889"	"0.0004078"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWGLTEMFPER"	"[R].lWGLTEMFPER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75Q41"	"Mitochondrial import receptor subunit TOM22 homolog OS=Rattus norvegicus OX=10116 GN=Tomm22 PE=1 SV=1"	"Q75Q41"	"Mitochondrial import receptor subunit TOM22 homolog OS=Rattus norvegicus OX=10116 GN=Tomm22 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.42645"	"1607.84563"	"1607.84532"	"0.19"	"0.00016"	"7/90"	"7"	"90"	"336223.992431641"	"HCD"	"MS2"	"38.95257"	"23.2"	"100.000"	"77.1339"	"25876"	"25876"	"25849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.6"	""	"27.0"	""	"30.8"	""	"33.5"	"2.3"	"46.7"	"47.2"	""	"994"	"30"	"36.000"	"29.000"	"0.0499294047768362"	"14"	"0.0001308"	"0.0002994"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWGLTEMFPER"	"[R].lWGLTEMFPER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75Q41"	"Mitochondrial import receptor subunit TOM22 homolog OS=Rattus norvegicus OX=10116 GN=Tomm22 PE=1 SV=1"	"Q75Q41"	"Mitochondrial import receptor subunit TOM22 homolog OS=Rattus norvegicus OX=10116 GN=Tomm22 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.42651"	"1607.84575"	"1607.84532"	"0.27"	"0.00022"	"6/90"	"6"	"90"	"417920.766113281"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"77.0729"	"25902"	"25902"	"25877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.0"	""	"51.6"	""	"59.4"	""	"55.2"	""	"63.3"	"65.2"	""	"989"	"13"	"36.000"	"29.000"	"2.61316177002827"	"14"	"0.0001889"	"0.0005339"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVSIFSPEGK"	"[R].wVSIFSPEGk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O70277"	"Tripartite motif-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Trim3 PE=1 SV=1"	"O70277"	"Tripartite motif-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Trim3 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"804.46234"	"1607.91741"	"1607.91975"	"-1.46"	"-0.00117"	"8/82"	"8"	"82"	"752141.082946777"	"HCD"	"MS2"	"23.86157"	"62.7"	"100.000"	"66.1546"	"21466"	"21466"	"21443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.4"	""	"86.1"	""	"84.5"	""	"100.5"	""	"121.6"	"122.4"	""	"940"	"50"	"36.000"	"29.000"	"0.000476538351296239"	"21"	"7.476E-05"	"0.0001977"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVSIFSPEGK"	"[R].wVSIFSPEGk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O70277"	"Tripartite motif-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Trim3 PE=1 SV=1"	"O70277"	"Tripartite motif-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Trim3 PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"804.46283"	"1607.91838"	"1607.91975"	"-0.85"	"-0.00068"	"8/82"	"8"	"82"	"797394.123657227"	"HCD"	"MS2"	"0"	"65.4"	"100.000"	"66.1969"	"21431"	"21431"	"21401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.3"	""	"90.3"	""	"92.0"	""	"109.9"	"0.6"	"122.2"	"128.0"	""	"928"	"47"	"36.000"	"29.000"	"0.00101512139351259"	"21"	"0"	"0.0001158"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFLQEVWK"	"[R].eAFLQEVWk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"804.46313"	"1607.91899"	"1607.91975"	"-0.47"	"-0.00038"	"8/82"	"8"	"82"	"1005212.03875732"	"HCD"	"MS2"	"0"	"98.0"	"100.000"	"64.1598"	"20599"	"20599"	"20569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.8"	""	"145.0"	""	"138.5"	""	"174.0"	""	"173.0"	"165.7"	""	"910"	"43"	"36.000"	"29.000"	"0.00208454558455113"	"28"	"0"	"0.0001058"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFLQEVWK"	"[R].eAFLQEVWk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"804.46326"	"1607.91924"	"1607.91975"	"-0.32"	"-0.00026"	"16/82"	"16"	"82"	"1276223.92218018"	"HCD"	"MS2"	"13.15705"	"110.4"	"100.000"	"64.1951"	"20666"	"20666"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.5"	""	"149.8"	""	"156.0"	""	"181.6"	"2.0"	"195.3"	"197.1"	""	"910"	"53"	"36.000"	"29.000"	"0.00025177429969316"	"27"	"0"	"6.454E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGQFQLMQGK"	"[K].iGQFQLMQGk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.3111"	"0.0000"	"1"	"1"	"1"	"804.47174"	"1607.93620"	"1607.93435"	"1.15"	"0.00093"	"8/88"	"8"	"88"	"3087946.7822876"	"HCD"	"MS2"	"0"	"257.4"	"100.000"	"52.3973"	"15818"	"15818"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"394.4"	""	"395.6"	""	"401.6"	""	"311.1"	"3.5"	"429.5"	"500.4"	""	"826"	"45"	"36.000"	"29.000"	"0.00141889432482648"	""	"0"	"8.299E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGQFQLMQGK"	"[K].iGQFQLMQGk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"804.47180"	"1607.93633"	"1607.93435"	"1.23"	"0.00099"	"14/88"	"14"	"88"	"3503829.78796387"	"HCD"	"MS2"	"0"	"295.3"	"100.000"	"52.6001"	"15951"	"15951"	"15926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"481.9"	""	"451.9"	""	"440.2"	""	"358.6"	""	"489.6"	"573.1"	""	"828"	"38"	"36.000"	"29.000"	"0.00706318109047293"	""	"0"	"6.656E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTQTSFLK"	"[K].lDPTQTSFLk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"804.47198"	"1607.93669"	"1607.94088"	"-2.60"	"-0.00209"	"9/92"	"9"	"92"	"1653571.35394287"	"HCD"	"MS2"	"24.30317"	"166.4"	"100.000"	"52.7146"	"15948"	"15948"	"15922"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.6"	""	"243.7"	""	"254.8"	""	"195.6"	"1.4"	"278.8"	"333.6"	""	"814"	"25"	"36.000"	"29.000"	"0.140473501909693"	"22"	"0"	"8.733E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"536.65088"	"1607.93808"	"1607.94088"	"-1.74"	"-0.00093"	"10/92"	"10"	"92"	"3699788.8916626"	"HCD"	"MS2"	"14.51978"	"129.1"	"100.000"	"58.8228"	"18473"	"18473"	"18453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.7"	""	"196.8"	""	"181.9"	""	"194.8"	""	"243.7"	"228.6"	""	"810"	"31"	"36.000"	"29.000"	"0.0292048529069074"	"20"	"0.0001889"	"0.0004022"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTQTSFLK"	"[K].lDPTQTSFLk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"804.47272"	"1607.93816"	"1607.94088"	"-1.69"	"-0.00136"	"9/92"	"9"	"92"	"1613588.71551514"	"HCD"	"MS2"	"21.66614"	"161.1"	"100.000"	"52.9064"	"16076"	"16076"	"16054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.0"	""	"238.8"	""	"246.0"	""	"202.5"	""	"254.9"	"332.3"	""	"810"	"20"	"36.000"	"29.000"	"0.405"	"25"	"0"	"9.413E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7018"	"0.0000"	"1"	"1"	"1"	"804.47345"	"1607.93962"	"1607.94088"	"-0.78"	"-0.00063"	"16/92"	"16"	"92"	"3406578.00860596"	"HCD"	"MS2"	"3.582742"	"262.5"	"100.000"	"58.7781"	"18455"	"18455"	"18437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"373.3"	""	"434.2"	""	"381.5"	""	"385.8"	"0.6"	"455.1"	"454.0"	""	"790"	"57"	"35.000"	"28.000"	"8.15825161545158E-05"	""	"0"	"3.906E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7193"	"0.0000"	"1"	"1"	"1"	"804.47357"	"1607.93987"	"1607.94088"	"-0.63"	"-0.00051"	"16/92"	"16"	"92"	"3090610.25476074"	"HCD"	"MS2"	"0"	"249.3"	"100.000"	"58.6312"	"18346"	"18346"	"18329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.6"	""	"416.5"	""	"340.1"	""	"344.0"	"1.5"	"459.4"	"428.3"	""	"789"	"57"	"35.000"	"28.000"	"7.76331141289349E-05"	""	"0"	"3.842E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"536.65149"	"1607.93991"	"1607.94088"	"-0.60"	"-0.00032"	"7/92"	"7"	"92"	"32023560.572998"	"HCD"	"MS2"	"18.77594"	"814.9"	"100.000"	"58.2072"	"18226"	"18226"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1145.1"	""	"1414.5"	""	"1179.7"	""	"1206.4"	"1.9"	"1387.0"	"1376.1"	""	"789"	"42"	"35.000"	"28.000"	"0.00269182614838889"	"26"	"0"	"4.539E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVVLQTLEGHLR"	"[K].nVVLQTLEGHLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"536.65155"	"1607.94010"	"1607.94306"	"-1.84"	"-0.00099"	"11/114"	"11"	"114"	"3225116.01300049"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"50.3755"	"14991"	"14991"	"14970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.9"	""	"91.0"	""	"94.5"	""	"132.3"	""	"144.2"	"142.8"	""	"756"	"34"	"35.000"	"28.000"	"0.0168846397833064"	"23"	"0"	"0.0001289"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7115"	"0.0000"	"1"	"1"	"1"	"804.47369"	"1607.94011"	"1607.94088"	"-0.48"	"-0.00038"	"16/92"	"16"	"92"	"885163.317016602"	"HCD"	"MS2"	"0"	"83.6"	"100.000"	"59.6253"	"18800"	"18800"	"18773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.9"	""	"77.7"	""	"108.8"	""	"96.8"	""	"296.0"	"143.6"	""	"756"	"52"	"35.000"	"28.000"	"0.000235771767812355"	""	"0"	"1.097E-05"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"804.47375"	"1607.94023"	"1607.94088"	"-0.40"	"-0.00032"	"9/92"	"9"	"92"	"57284750.519043"	"HCD"	"MS2"	"0"	"654.2"	"15.703"	"58.3212"	"18219"	"18219"	"18203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"913.2"	""	"1121.3"	""	"943.3"	""	"914.9"	""	"1156.9"	"1145.1"	""	"755"	"52"	"35.000"	"28.000"	"0.000263582732539132"	""	"7.476E-05"	"0.0001888"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"536.65161"	"1607.94028"	"1607.94088"	"-0.37"	"-0.00020"	"11/92"	"11"	"92"	"69899374.6083984"	"HCD"	"MS2"	"5.288733"	"205.4"	"11.991"	"58.3256"	"18220"	"18220"	"18203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"277.1"	""	"344.0"	""	"300.1"	""	"297.6"	""	"363.4"	"365.2"	""	"756"	"44"	"35.000"	"28.000"	"0.00160137041166727"	"23"	"0.0001308"	"0.0002164"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"804.47382"	"1607.94036"	"1607.94088"	"-0.33"	"-0.00026"	"9/92"	"9"	"92"	"19720556.1409912"	"HCD"	"MS2"	"3.065681"	"1284.6"	"100.000"	"58.1912"	"18219"	"18219"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1831.8"	""	"2221.6"	""	"1854.5"	""	"1919.5"	"6.9"	"2193.9"	"2125.4"	""	"756"	"65"	"35.000"	"28.000"	"1.26908818183837E-05"	""	"0"	"0.0001049"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"804.47424"	"1607.94121"	"1607.94088"	"0.21"	"0.00017"	"8/92"	"8"	"92"	"60335629.4853516"	"HCD"	"MS2"	"0"	"542.6"	"13.041"	"58.4901"	"18342"	"18342"	"18325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"742.8"	""	"958.8"	""	"774.3"	""	"766.2"	"2.8"	"962.9"	"928.9"	""	"760"	"52"	"35.000"	"28.000"	"0.000248761746145564"	"28"	"7.476E-05"	"0.0001948"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"536.65198"	"1607.94138"	"1607.94088"	"0.31"	"0.00017"	"10/92"	"10"	"92"	"80411038.8344727"	"HCD"	"MS2"	"4.30559"	"209.0"	"10.312"	"58.4945"	"18343"	"18343"	"18325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.2"	""	"357.8"	""	"299.9"	""	"295.7"	"3.7"	"386.1"	"345.8"	""	"758"	"36"	"35.000"	"28.000"	"0.00854356661405771"	"23"	"0.0001889"	"0.0003785"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVVLQTLEGHLR"	"[K].nVVLQTLEGHLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.65198"	"1607.94138"	"1607.94306"	"-1.04"	"-0.00056"	"7/114"	"7"	"114"	"2691590.99450684"	"HCD"	"MS2"	"100"	"100.1"	"100.000"	"50.5255"	"15103"	"15103"	"15076"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.4"	""	"124.4"	""	"125.8"	""	"188.1"	""	"190.5"	"201.4"	""	"758"	"5"	"35.000"	"28.000"	"12.1517607398757"	"13"	"0.000523"	"0.002928"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"536.65198"	"1607.94138"	"1607.94088"	"0.31"	"0.00017"	"10/92"	"10"	"92"	"21988297.2172852"	"HCD"	"MS2"	"4.515746"	"566.5"	"100.000"	"58.0292"	"18099"	"18099"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"790.0"	""	"954.9"	""	"838.3"	""	"871.9"	""	"987.2"	"925.6"	""	"758"	"36"	"35.000"	"28.000"	"0.0104867088361096"	"23"	"0.0001859"	"0.0003715"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"804.47443"	"1607.94158"	"1607.94088"	"0.43"	"0.00035"	"9/92"	"9"	"92"	"14307339.1511841"	"HCD"	"MS2"	"2.70054"	"999.5"	"100.000"	"58.0174"	"18094"	"18094"	"18075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1458.4"	""	"1735.4"	""	"1448.3"	""	"1477.3"	"2.6"	"1690.3"	"1642.2"	""	"748"	"65"	"35.000"	"28.000"	"1.19363515780769E-05"	""	"0"	"6.962E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVFFINVEK"	"[R].gPVFFINVEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"804.48053"	"1607.95378"	"1607.95614"	"-1.46"	"-0.00118"	"8/78"	"8"	"78"	"2282403.81652832"	"HCD"	"MS2"	"13.78026"	"195.3"	"100.000"	"64.4256"	"20760"	"20760"	"20739"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"272.0"	""	"298.1"	"2.3"	"300.4"	""	"328.3"	""	"339.1"	"308.5"	""	"665"	"47"	"35.000"	"28.000"	"0.000629204253199455"	"21"	"0"	"3.001E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVFFINVEK"	"[R].gPVFFINVEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"536.65619"	"1607.95401"	"1607.95614"	"-1.32"	"-0.00071"	"11/78"	"11"	"78"	"3831321.27514648"	"HCD"	"MS2"	"24.90029"	"102.6"	"100.000"	"64.4348"	"20764"	"20764"	"20739"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.2"	""	"161.6"	""	"164.2"	""	"153.8"	""	"181.1"	"174.4"	""	"665"	"31"	"35.000"	"28.000"	"0.025810216627904"	"21"	"0.0001889"	"0.000414"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVFFINVEK"	"[R].gPVFFINVEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"536.65692"	"1607.95621"	"1607.95614"	"0.05"	"0.00003"	"11/78"	"11"	"78"	"3290231.50402832"	"HCD"	"MS2"	"25.1042"	"89.4"	"100.000"	"64.4225"	"20706"	"20706"	"20681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.8"	""	"148.0"	""	"144.8"	""	"141.7"	""	"151.2"	"145.5"	""	"651"	"29"	"35.000"	"28.000"	"0.0423205197649836"	"16"	"0.0001859"	"0.0003167"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVFFINVEK"	"[R].gPVFFINVEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"804.48224"	"1607.95720"	"1607.95614"	"0.66"	"0.00053"	"8/78"	"8"	"78"	"2604713.17095947"	"HCD"	"MS2"	"11.98253"	"229.7"	"100.000"	"64.4133"	"20702"	"20702"	"20681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"307.4"	""	"368.7"	""	"355.8"	""	"371.2"	"0.7"	"384.6"	"385.2"	""	"702"	"49"	"35.000"	"28.000"	"0.00046698950071031"	"22"	"0"	"6.537E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVPPLLLILDR"	"[R].tEVPPLLLILDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.49921"	"1607.99114"	"1607.99336"	"-1.38"	"-0.00111"	"11/108"	"11"	"108"	"291255.846740723"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"85.5302"	"29347"	"29347"	"29326"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.1"	""	"11.9"	""	"17.2"	""	"25.8"	""	"23.3"	"29.9"	""	"430"	"35"	"33.000"	"26.000"	"0.00725167713616569"	"15"	"0.0003571"	"0.001536"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVPPLLLILDR"	"[R].tEVPPLLLILDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.49982"	"1607.99236"	"1607.99336"	"-0.62"	"-0.00050"	"11/108"	"11"	"108"	"238221.694213867"	"HCD"	"MS2"	"9.36923"	"13.0"	"100.000"	"85.4601"	"29271"	"29271"	"29254"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.3"	""	"15.6"	""	"19.4"	""	"21.2"	""	"23.8"	"27.8"	""	"419"	"29"	"33.000"	"26.000"	"0.0282607723902952"	"14"	"0.0002277"	"0.001308"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVPPLLLILDR"	"[R].tEVPPLLLILDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.50012"	"1607.99297"	"1607.99336"	"-0.24"	"-0.00020"	"4/108"	"4"	"108"	"204097.25994873"	"HCD"	"MS2"	"23.29463"	"10.4"	"100.000"	"85.8593"	"29429"	"29429"	"29400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.3"	""	"11.7"	""	"15.4"	""	"14.4"	""	"25.6"	"20.0"	""	"429"	"15"	"33.000"	"26.000"	"0.761074719906019"	"13"	"0.002489"	"0.03786"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVPPLLLILDR"	"[R].tEVPPLLLILDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.50037"	"1607.99346"	"1607.99336"	"0.06"	"0.00005"	"9/108"	"9"	"108"	"294898.957458496"	"HCD"	"MS2"	"23.29597"	"12.3"	"100.000"	"85.8370"	"29471"	"29471"	"29453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.9"	""	"13.8"	""	"14.1"	""	"20.5"	""	"25.3"	"24.7"	""	"429"	"16"	"33.000"	"26.000"	"0.596248495934367"	"13"	"0.0009727"	"0.0103"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFGESHPFTK"	"[K].tFGESHPFTk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.96399"	"1608.87741"	"1608.87861"	"-0.75"	"-0.00040"	"11/88"	"11"	"88"	"20930343.0984497"	"HCD"	"MS2"	"4.832142"	"690.2"	"100.000"	"34.2607"	"8465"	"8465"	"8452"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1114.8"	""	"985.6"	""	"953.1"	""	"1220.0"	"2.8"	"1071.2"	"1177.3"	""	"1021"	"31"	"37.000"	"30.000"	"0.0429532219809873"	"14"	"0.0001889"	"0.0005778"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFGESHPFTK"	"[K].tFGESHPFTk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"536.96405"	"1608.87760"	"1608.87861"	"-0.63"	"-0.00034"	"12/88"	"12"	"88"	"24109220.2111206"	"HCD"	"MS2"	"10.04935"	"700.2"	"91.012"	"34.2237"	"8407"	"8407"	"8389"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1144.8"	""	"969.8"	""	"951.8"	""	"1202.1"	"6.9"	"1107.3"	"1238.7"	""	"1019"	"40"	"37.000"	"30.000"	"0.00455139143962114"	"17"	"0.0001308"	"0.0002239"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPQDMSGFQK"	"[K].lPQDMSGFQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"804.94360"	"1608.87993"	"1608.88198"	"-1.28"	"-0.00103"	"9/90"	"9"	"90"	"3104716.04229736"	"HCD"	"MS2"	"0"	"207.1"	"100.000"	"47.2126"	"13755"	"13755"	"13730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.5"	""	"278.8"	""	"275.5"	""	"286.7"	""	"445.4"	"430.8"	""	"1013"	"20"	"37.000"	"30.000"	"0.514729962939007"	"15"	"0"	"0.0001347"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPQDMSGFQK"	"[K].lPQDMSGFQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"804.94427"	"1608.88127"	"1608.88198"	"-0.44"	"-0.00036"	"9/90"	"9"	"90"	"4143193.70739746"	"HCD"	"MS2"	"0"	"301.0"	"100.000"	"46.9815"	"13612"	"13612"	"13592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.8"	""	"406.7"	""	"404.2"	""	"393.9"	""	"650.3"	"641.8"	""	"999"	"44"	"36.000"	"29.000"	"0.00207747349941764"	"21"	"0"	"4.799E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFGESHPFTK"	"[K].tFGESHPFTk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.94446"	"1608.88164"	"1608.87861"	"1.88"	"0.00151"	"7/88"	"7"	"88"	"121140.066894531"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"34.3248"	"8449"	"8449"	"8419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.0"	""	"15.1"	""	"13.4"	"2.6"	"23.3"	""	"15.4"	"21.3"	""	"995"	"9"	"36.000"	"29.000"	"5.59490974548546"	"13"	"0.003507"	"0.08173"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSIFSYATK"	"[R].sFSIFSYATk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"536.97260"	"1608.90323"	"1608.90377"	"-0.33"	"-0.00018"	"12/88"	"12"	"88"	"9785844.61956787"	"HCD"	"MS2"	"10.96964"	"224.4"	"100.000"	"62.8613"	"20121"	"20121"	"20099"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"306.8"	""	"383.4"	""	"327.9"	""	"395.1"	""	"347.3"	"361.1"	""	"927"	"51"	"36.000"	"29.000"	"0.000399990556889991"	"24"	"0"	"0.0001185"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSIFSYATK"	"[R].sFSIFSYATk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"0"	"2"	"2"	"0.9265"	"0.0000"	"1"	"1"	"1"	"804.95532"	"1608.90337"	"1608.90377"	"-0.25"	"-0.00020"	"9/88"	"9"	"88"	"7576547.22424316"	"HCD"	"MS2"	"4.014751"	"610.3"	"100.000"	"62.8519"	"20117"	"20117"	"20099"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"847.9"	""	"963.1"	""	"951.7"	""	"1069.1"	"10.6"	"934.5"	"992.3"	""	"927"	"68"	"36.000"	"29.000"	"7.92592098544349E-06"	"22"	"0"	"3.633E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSIFSYATK"	"[R].sFSIFSYATk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"536.97284"	"1608.90396"	"1608.90377"	"0.12"	"0.00007"	"11/88"	"11"	"88"	"8558127.73468018"	"HCD"	"MS2"	"4.54871"	"193.9"	"100.000"	"62.7682"	"20030"	"20030"	"20009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.6"	""	"300.6"	"3.3"	"293.5"	""	"355.8"	""	"327.0"	"304.1"	""	"939"	"31"	"36.000"	"29.000"	"0.0398690233029549"	"22"	"0.0001308"	"0.0002923"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFSIFSYATK"	"[R].sFSIFSYATk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"P48199"	"C-reactive protein OS=Rattus norvegicus OX=10116 GN=Crp PE=1 SV=1"	"0"	"2"	"2"	"0.9265"	"0.0000"	"1"	"1"	"1"	"804.95599"	"1608.90471"	"1608.90377"	"0.59"	"0.00047"	"9/88"	"9"	"88"	"7698215.30029297"	"HCD"	"MS2"	"2.733145"	"607.0"	"100.000"	"62.7567"	"20026"	"20026"	"20009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"856.6"	""	"977.6"	""	"946.1"	""	"1054.6"	"1.3"	"963.9"	"937.2"	""	"934"	"68"	"36.000"	"29.000"	"7.80399316883101E-06"	"22"	"0"	"3.833E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVEDLFADK"	"[R].tLVEDLFADk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"536.97864"	"1608.92136"	"1608.92489"	"-2.20"	"-0.00118"	"10/88"	"10"	"88"	"1458448.9586792"	"HCD"	"MS2"	"32.84335"	"38.9"	"100.000"	"70.6764"	"23303"	"23303"	"23274"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.4"	""	"44.7"	""	"37.5"	""	"73.7"	"0.1"	"84.4"	"86.9"	""	"879"	"36"	"36.000"	"29.000"	"0.0122450025361278"	"23"	"0.0003839"	"0.001804"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVEDLFADK"	"[R].tLVEDLFADk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"804.96521"	"1608.92314"	"1608.92489"	"-1.09"	"-0.00088"	"18/88"	"18"	"88"	"962276.854125977"	"HCD"	"MS2"	"7.746319"	"81.5"	"100.000"	"70.6604"	"23296"	"23296"	"23274"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.7"	""	"83.1"	""	"81.8"	""	"155.1"	""	"183.6"	"184.7"	""	"847"	"63"	"36.000"	"29.000"	"1.97175710606973E-05"	"25"	"0"	"7.865E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVEDLFADK"	"[R].tLVEDLFADk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"804.96582"	"1608.92436"	"1608.92489"	"-0.33"	"-0.00027"	"9/88"	"9"	"88"	"920730.602661133"	"HCD"	"MS2"	"0"	"80.7"	"100.000"	"70.7679"	"23288"	"23288"	"23267"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.6"	""	"84.5"	""	"79.0"	""	"138.2"	""	"186.4"	"185.3"	""	"844"	"64"	"36.000"	"29.000"	"1.54993130810192E-05"	"26"	"0"	"1.006E-05"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGFQTQISK"	"[K].lEGFQTQISk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"804.97076"	"1608.93425"	"1608.93613"	"-1.17"	"-0.00094"	"9/96"	"9"	"96"	"2429978.17724609"	"HCD"	"MS2"	"0"	"218.7"	"100.000"	"46.7964"	"13585"	"13585"	"13554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.9"	""	"261.5"	""	"272.8"	""	"403.0"	"1.3"	"418.5"	"430.5"	""	"821"	"47"	"36.000"	"29.000"	"0.000800411208200677"	"22"	"0"	"3.581E-05"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGFQTQISK"	"[K].lEGFQTQISk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"536.98322"	"1608.93509"	"1608.93613"	"-0.64"	"-0.00035"	"7/96"	"7"	"96"	"5786703.63519287"	"HCD"	"MS2"	"4.247079"	"172.5"	"100.000"	"46.6358"	"13471"	"13471"	"13448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.1"	""	"212.2"	""	"235.8"	""	"290.5"	""	"353.0"	"334.3"	""	"820"	"35"	"36.000"	"29.000"	"0.0130251836896641"	"20"	"0.0001889"	"0.0004271"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGFQTQISK"	"[K].lEGFQTQISk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"804.97125"	"1608.93523"	"1608.93613"	"-0.56"	"-0.00045"	"9/96"	"9"	"96"	"2406932.88848877"	"HCD"	"MS2"	"0"	"221.2"	"100.000"	"46.5139"	"13421"	"13421"	"13400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.1"	""	"255.7"	""	"277.8"	""	"409.1"	"0.8"	"408.0"	"424.7"	""	"820"	"59"	"36.000"	"29.000"	"4.83931460617209E-05"	"24"	"0"	"2.424E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGFQTQISK"	"[K].lEGFQTQISk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"536.98334"	"1608.93546"	"1608.93613"	"-0.42"	"-0.00022"	"7/96"	"7"	"96"	"4533087.52575684"	"HCD"	"MS2"	"3.682309"	"149.4"	"100.000"	"46.9412"	"13644"	"13644"	"13618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.6"	""	"201.7"	""	"210.0"	""	"264.0"	""	"289.0"	"283.9"	""	"786"	"36"	"35.000"	"28.000"	"0.00998602273280876"	"20"	"0.0001859"	"0.0003525"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEYPFPLIK"	"[K].sGEYPFPLIk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.97357"	"1608.93987"	"1608.94015"	"-0.18"	"-0.00014"	"8/76"	"8"	"76"	"4575102.67810059"	"HCD"	"MS2"	"21.67235"	"309.3"	"100.000"	"59.8297"	"18830"	"18830"	"18809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"510.3"	""	"426.9"	""	"418.3"	""	"491.6"	""	"524.1"	"557.2"	""	"736"	"28"	"35.000"	"28.000"	"0.0550614721442751"	"14"	"0.0001308"	"0.0002611"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEYPFPLIK"	"[K].sGEYPFPLIk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"536.98499"	"1608.94040"	"1608.94015"	"0.16"	"0.00008"	"6/76"	"6"	"76"	"4541729.24237061"	"HCD"	"MS2"	"30.8688"	"107.7"	"100.000"	"59.8596"	"18896"	"18896"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.4"	""	"142.0"	""	"164.6"	"2.7"	"163.8"	""	"192.1"	"191.0"	""	"754"	"17"	"35.000"	"28.000"	"0.778648318740569"	"16"	"0.0003839"	"0.001902"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEYPFPLIK"	"[K].sGEYPFPLIk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"536.98535"	"1608.94150"	"1608.94015"	"0.84"	"0.00045"	"9/76"	"9"	"76"	"5894511.04022217"	"HCD"	"MS2"	"29.41136"	"143.8"	"100.000"	"59.8574"	"18842"	"18842"	"18825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.3"	""	"197.3"	""	"187.8"	""	"226.9"	""	"250.3"	"281.1"	""	"745"	"21"	"35.000"	"28.000"	"0.284528829382689"	"19"	"0.0001889"	"0.0008484"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVqEVTDFAk.[T]"	"N-Term(TMT6plex); Q3(Deamidated); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"804.97638"	"1608.94548"	"1608.92490"	"12.80"	"0.01029"	"9/92"	"9"	"92"	"1099944.76013184"	"HCD"	"MS2"	"42.41422"	"108.9"	"100.000"	"59.5861"	"18784"	"18784"	"18757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.5"	""	"107.1"	""	"146.5"	""	"136.5"	""	"352.8"	"192.3"	""	"734"	"32"	"35.000"	"28.000"	"0.0255073924555088"	"18"	"0.002711"	"0.0404"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MRDVILFEK"	"[R].mRDVILFEk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.99139"	"1608.95963"	"1608.95476"	"3.03"	"0.00162"	"12/88"	"12"	"88"	"9067346.77844238"	"HCD"	"MS2"	"66.76059"	"369.3"	"90.497"	"48.0777"	"14109"	"14109"	"14082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"716.4"	""	"744.3"	""	"590.4"	""	"435.9"	"0.9"	"491.0"	"501.4"	""	"641"	"12"	"35.000"	"28.000"	"2.05981413400105"	"13"	"0.0001889"	"0.0009097"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVPIQQVLK"	"[K].iLVPIQQVLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35162"	"Heat shock 70 kDa protein 13 OS=Rattus norvegicus OX=10116 GN=Hspa13 PE=1 SV=2"	"O35162"	"Heat shock 70 kDa protein 13 OS=Rattus norvegicus OX=10116 GN=Hspa13 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.04370"	"1609.08013"	"1609.08167"	"-0.96"	"-0.00077"	"8/82"	"8"	"82"	"437393.96484375"	"HCD"	"MS2"	"34.83472"	"35.9"	"100.000"	"70.1888"	"23052"	"23052"	"23027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.7"	""	"43.6"	""	"49.2"	""	"65.1"	""	"67.8"	"74.3"	""	"22"	"53"	"20.000"	"13.000"	"5.2528220102346E-06"	""	"0.0001889"	"0.0008326"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVPIQQVLK"	"[K].iLVPIQQVLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35162"	"Heat shock 70 kDa protein 13 OS=Rattus norvegicus OX=10116 GN=Hspa13 PE=1 SV=2"	"O35162"	"Heat shock 70 kDa protein 13 OS=Rattus norvegicus OX=10116 GN=Hspa13 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.04431"	"1609.08135"	"1609.08167"	"-0.20"	"-0.00016"	"7/82"	"7"	"82"	"472051.366394043"	"HCD"	"MS2"	"50.25684"	"36.9"	"100.000"	"70.0464"	"23046"	"23046"	"23018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.8"	""	"38.3"	""	"50.4"	""	"69.9"	""	"71.1"	"73.3"	""	"22"	"36"	"20.000"	"13.000"	"0.000280797143292737"	""	"0.000523"	"0.002989"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVGMAVAGLLADAR"	"[R].hVGMAVAGLLADAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"3"	"3"	"0.8690"	"0.0000"	"1"	"1"	"1"	"537.30597"	"1609.90335"	"1609.90456"	"-0.75"	"-0.00040"	"18/104"	"18"	"104"	"8327389.09466553"	"HCD"	"MS2"	"8.936119"	"84.9"	"100.000"	"46.8407"	"13555"	"13555"	"13528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.7"	""	"115.3"	""	"120.9"	""	"135.4"	""	"172.6"	"162.6"	""	"958"	"84"	"36.000"	"29.000"	"2.0480262246661E-07"	"29"	"0"	"1.348E-06"	"1.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVGMAVAGLLADAR"	"[R].hVGMAVAGLLADAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"537.30652"	"1609.90500"	"1609.90456"	"0.27"	"0.00015"	"18/104"	"18"	"104"	"10741055.5526733"	"HCD"	"MS2"	"24.19751"	"97.4"	"100.000"	"47.1344"	"13723"	"13723"	"13698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.5"	""	"118.2"	""	"131.5"	""	"152.9"	""	"198.3"	"191.7"	""	"968"	"82"	"36.000"	"29.000"	"3.23478456103209E-07"	"27"	"0"	"6.119E-07"	"1.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVGMAVAGLLADAR"	"[R].hVGMAVAGLLADAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"537.30835"	"1609.91050"	"1609.90456"	"3.69"	"0.00198"	"13/104"	"13"	"104"	"3461051.3449707"	"HCD"	"MS2"	"54.51866"	"114.6"	"100.000"	"47.2413"	"13719"	"13719"	"13688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.9"	""	"144.3"	""	"159.7"	""	"164.7"	""	"235.2"	"245.7"	""	"948"	"29"	"36.000"	"29.000"	"0.0624853694075737"	"15"	"0"	"2.016E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLDLILNDFVR"	"[R].yLDLILNDFVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.46130"	"1609.91533"	"1609.91511"	"0.14"	"0.00011"	"4/98"	"4"	"98"	"126699.053466797"	"HCD"	"MS2"	"9.139502"	"5.3"	"100.000"	"91.6968"	"31634"	"31634"	"31626"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"10.8"	""	"6.5"	""	"7.1"	""	"9.5"	"9.1"	""	"922"	"14"	"36.000"	"29.000"	"2.0450358485239"	"13"	"0.002489"	"0.0378"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQTLAGK"	"[K].yEELQTLAGk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.2750"	"0.0000"	"1"	"1"	"1"	"805.46185"	"1609.91643"	"1609.92014"	"-2.31"	"-0.00186"	"8/90"	"8"	"90"	"3029125.24603271"	"HCD"	"MS2"	"0"	"262.3"	"100.000"	"49.9552"	"14872"	"14872"	"14846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"335.2"	""	"337.4"	""	"395.8"	""	"378.5"	""	"467.9"	"582.8"	""	"909"	"40"	"36.000"	"29.000"	"0.00469390058918555"	""	"0"	"0.0001224"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQTLAGK"	"[K].yEELQTLAGk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"805.46228"	"1609.91728"	"1609.92014"	"-1.78"	"-0.00143"	"8/90"	"8"	"90"	"1146423.14727783"	"HCD"	"MS2"	"0"	"98.2"	"100.000"	"49.8361"	"14777"	"14777"	"14751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.3"	""	"121.1"	""	"137.9"	""	"151.1"	"0.3"	"165.9"	"213.9"	""	"905"	"60"	"36.000"	"29.000"	"4.3412878576096E-05"	""	"0"	"3.823E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQTLAGK"	"[K].yEELQTLAGk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.2619"	"0.0000"	"1"	"1"	"1"	"805.46277"	"1609.91826"	"1609.92014"	"-1.17"	"-0.00094"	"8/90"	"8"	"90"	"4063407.41070557"	"HCD"	"MS2"	"14.59657"	"328.9"	"100.000"	"49.5324"	"14653"	"14653"	"14623"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"501.3"	""	"467.3"	""	"511.2"	""	"484.9"	""	"527.2"	"625.7"	""	"895"	"42"	"36.000"	"29.000"	"0.00296341885406538"	""	"0"	"0.0001216"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQTLAGK"	"[K].yEELQTLAGk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.3200"	"0.0000"	"1"	"1"	"1"	"537.31110"	"1609.91874"	"1609.92014"	"-0.87"	"-0.00047"	"9/90"	"9"	"90"	"6869330.73919678"	"HCD"	"MS2"	"7.93513"	"242.3"	"100.000"	"49.9575"	"14873"	"14873"	"14846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.2"	""	"277.5"	""	"342.2"	""	"416.4"	"1.5"	"456.5"	"459.4"	""	"894"	"25"	"36.000"	"29.000"	"0.139093720268639"	""	"0.0001889"	"0.0009165"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQTLAGK"	"[K].yEELQTLAGk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.3043"	"0.0000"	"1"	"1"	"1"	"537.31158"	"1609.92020"	"1609.92014"	"0.03"	"0.00002"	"10/90"	"10"	"90"	"6581818.65899658"	"HCD"	"MS2"	"5.428797"	"219.0"	"99.661"	"49.6916"	"14718"	"14718"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"305.0"	""	"266.8"	""	"298.1"	""	"357.7"	"1.6"	"406.7"	"440.1"	""	"872"	"23"	"36.000"	"29.000"	"0.220032325737698"	""	"0.0001889"	"0.0008103"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPELNYQLK"	"[K].fPELNYQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"537.31598"	"1609.93338"	"1609.93540"	"-1.25"	"-0.00067"	"6/72"	"6"	"72"	"2485267.55426025"	"HCD"	"MS2"	"46.49837"	"69.4"	"100.000"	"59.5423"	"18766"	"18766"	"18741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.3"	""	"82.9"	""	"92.9"	""	"108.5"	"1.0"	"157.4"	"130.4"	""	"791"	"9"	"35.000"	"28.000"	"4.94477446451108"	"20"	"0.002033"	"0.03157"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPELNYQLK"	"[K].fPELNYQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"537.31616"	"1609.93393"	"1609.93540"	"-0.91"	"-0.00049"	"9/72"	"9"	"72"	"2837214.75738525"	"HCD"	"MS2"	"31.7707"	"85.2"	"100.000"	"59.3352"	"18628"	"18628"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.8"	""	"108.5"	""	"113.2"	""	"126.3"	""	"188.6"	"169.4"	""	"798"	"13"	"36.000"	"29.000"	"2.13291179399392"	"19"	"0.0006037"	"0.004086"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPELNYQLK"	"[K].fPELNYQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"805.47107"	"1609.93486"	"1609.93540"	"-0.33"	"-0.00027"	"6/72"	"6"	"72"	"1577569.07409668"	"HCD"	"MS2"	"0"	"146.3"	"100.000"	"59.4685"	"18736"	"18736"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.4"	""	"184.1"	""	"199.3"	""	"223.1"	"1.2"	"356.4"	"246.8"	""	"791"	"29"	"35.000"	"28.000"	"0.0510677222714153"	"26"	"0.0001889"	"0.000956"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPELNYQLK"	"[K].fPELNYQLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"805.47235"	"1609.93743"	"1609.93540"	"1.26"	"0.00101"	"8/72"	"8"	"72"	"1521267.40960693"	"HCD"	"MS2"	"0"	"141.4"	"100.000"	"59.3214"	"18622"	"18622"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.6"	""	"173.7"	""	"188.7"	""	"230.8"	"1.1"	"326.7"	"254.5"	""	"790"	"42"	"35.000"	"28.000"	"0.00249802681293606"	"25"	"0"	"0.0001503"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLIDPETLLPR"	"[K].lTLIDPETLLPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"537.32819"	"1609.97000"	"1609.97262"	"-1.63"	"-0.00087"	"12/100"	"12"	"100"	"1811961.4954834"	"HCD"	"MS2"	"5.892205"	"19.2"	"100.000"	"80.3993"	"27208"	"27208"	"27185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.2"	""	"23.8"	""	"33.8"	""	"33.1"	"1.2"	"32.7"	"34.3"	""	"526"	"54"	"34.000"	"27.000"	"9.35310367836432E-05"	""	"0"	"0.000159"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLIDPETLLPR"	"[K].lTLIDPETLLPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"537.32831"	"1609.97037"	"1609.97262"	"-1.40"	"-0.00075"	"15/100"	"15"	"100"	"4462134.59863281"	"HCD"	"MS2"	"18.1148"	"39.9"	"100.000"	"80.6991"	"27330"	"27330"	"27312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.9"	""	"52.2"	""	"60.6"	""	"67.1"	""	"66.7"	"75.4"	""	"526"	"56"	"34.000"	"27.000"	"6.1511419376741E-05"	""	"0.0001308"	"0.0002093"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLIDPETLLPR"	"[K].lTLIDPETLLPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.6545"	"0.0000"	"1"	"1"	"1"	"537.32843"	"1609.97074"	"1609.97262"	"-1.17"	"-0.00063"	"12/100"	"12"	"100"	"4570998.18133545"	"HCD"	"MS2"	"18.66306"	"37.2"	"100.000"	"80.6870"	"27376"	"27376"	"27358"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.0"	""	"47.2"	""	"45.1"	""	"59.1"	"1.0"	"63.9"	"75.7"	""	"521"	"55"	"34.000"	"27.000"	"8.31395611253749E-05"	""	"0"	"9.477E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLIDPETLLPR"	"[K].lTLIDPETLLPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"537.32867"	"1609.97147"	"1609.97262"	"-0.72"	"-0.00038"	"14/100"	"14"	"100"	"2376442.25195313"	"HCD"	"MS2"	"23.43027"	"22.6"	"100.000"	"80.3804"	"27251"	"27251"	"27231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.8"	""	"28.1"	""	"39.2"	""	"33.8"	""	"37.3"	"41.6"	""	"517"	"56"	"34.000"	"27.000"	"6.18672123030792E-05"	"26"	"0"	"0.0001579"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLIDPETLLPR"	"[K].lTLIDPETLLPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"805.48938"	"1609.97148"	"1609.97262"	"-0.71"	"-0.00057"	"8/100"	"8"	"100"	"2736778.88726807"	"HCD"	"MS2"	"12.61672"	"90.3"	"100.000"	"80.3947"	"27206"	"27206"	"27185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.6"	""	"131.7"	""	"138.0"	""	"123.1"	"2.0"	"148.1"	"162.3"	""	"517"	"33"	"34.000"	"27.000"	"0.0128961640008413"	"18"	"0.0001889"	"0.0006136"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLIDPETLLPR"	"[K].lTLIDPETLLPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"805.48987"	"1609.97246"	"1609.97262"	"-0.10"	"-0.00008"	"9/100"	"9"	"100"	"2792564.65887451"	"HCD"	"MS2"	"17.21203"	"93.5"	"100.000"	"80.3778"	"27250"	"27250"	"27231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.6"	""	"135.2"	""	"134.6"	""	"121.7"	"1.1"	"158.0"	"168.0"	""	"526"	"39"	"34.000"	"27.000"	"0.00338030391565171"	"23"	"0.0001889"	"0.0005967"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLIDPETLLPR"	"[K].lTLIDPETLLPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"805.49011"	"1609.97295"	"1609.97262"	"0.20"	"0.00016"	"9/100"	"9"	"100"	"3894808.58770752"	"HCD"	"MS2"	"2.345778"	"141.8"	"100.000"	"80.6826"	"27375"	"27375"	"27358"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.6"	""	"204.6"	""	"185.1"	""	"247.1"	""	"237.2"	"254.3"	""	"527"	"44"	"34.000"	"27.000"	"0.00100179905930468"	""	"0"	"0.0001692"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLIDPETLLPR"	"[K].lTLIDPETLLPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"805.49017"	"1609.97307"	"1609.97262"	"0.28"	"0.00022"	"8/100"	"8"	"100"	"4032990.51782227"	"HCD"	"MS2"	"1.751642"	"152.4"	"100.000"	"80.6947"	"27329"	"27329"	"27312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.1"	""	"221.2"	""	"195.6"	""	"236.4"	""	"288.3"	"286.1"	""	"527"	"47"	"34.000"	"27.000"	"0.000576475187910707"	""	"0"	"1.294E-05"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWQGIYK"	"[K].kWQGIYk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"537.33850"	"1610.00095"	"1610.00331"	"-1.47"	"-0.00079"	"5/62"	"5"	"62"	"24448472.7410278"	"HCD"	"MS2"	"0"	"1007.9"	"71.147"	"37.2754"	"9702"	"9702"	"9686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1438.0"	""	"1368.5"	""	"1570.2"	""	"1484.8"	"6.9"	"1927.6"	"1751.3"	""	"335"	"20"	"32.000"	"25.000"	"0.156320095383496"	"14"	"0.0007444"	"0.00719"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWQGIYK"	"[K].kWQGIYk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"537.33856"	"1610.00113"	"1610.00331"	"-1.35"	"-0.00073"	"4/62"	"4"	"62"	"20807160.6494141"	"HCD"	"MS2"	"10.0324"	"431.5"	"33.105"	"37.2369"	"9643"	"9643"	"9624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"574.2"	""	"581.6"	""	"671.3"	""	"674.1"	""	"794.1"	"798.5"	""	"335"	"6"	"32.000"	"25.000"	"4.43623773216622"	"13"	"0.001654"	"0.02267"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFFPENWLWR"	"[R].sFFPENWLWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"805.91925"	"1610.83122"	"1610.83171"	"-0.30"	"-0.00024"	"9/88"	"9"	"88"	"1886278.07781982"	"HCD"	"MS2"	"45.47377"	"91.2"	"100.000"	"80.9573"	"27487"	"27487"	"27470"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.0"	""	"132.7"	""	"116.3"	""	"175.0"	""	"164.1"	"148.7"	""	"885"	"13"	"36.000"	"29.000"	"2.33837023910517"	"17"	"0.0003571"	"0.001523"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFFPENWLWR"	"[R].sFFPENWLWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.91956"	"1610.83183"	"1610.83171"	"0.07"	"0.00006"	"15/88"	"15"	"88"	"1423933.01757813"	"HCD"	"MS2"	"28.80968"	"75.9"	"100.000"	"80.9738"	"27442"	"27442"	"27424"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.0"	""	"130.3"	""	"80.0"	""	"153.7"	""	"119.8"	"133.9"	""	"887"	"8"	"36.000"	"29.000"	"6.32256967762569"	"13"	"0.000494"	"0.002715"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDISWNFEK"	"[R].nDISWNFEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"805.93134"	"1610.85539"	"1610.85788"	"-1.54"	"-0.00124"	"16/92"	"16"	"92"	"2035428.71234131"	"HCD"	"MS2"	"0"	"186.1"	"100.000"	"51.5868"	"15537"	"15537"	"15510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"369.6"	""	"239.1"	""	"296.4"	""	"297.5"	"0.6"	"270.1"	"283.0"	""	"945"	"52"	"36.000"	"29.000"	"0.000326890133759197"	"27"	"0"	"0.0001142"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDISWNFEK"	"[R].nDISWNFEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"805.93231"	"1610.85735"	"1610.85788"	"-0.33"	"-0.00027"	"16/92"	"16"	"92"	"1871628.44421387"	"HCD"	"MS2"	"0"	"189.2"	"100.000"	"51.3893"	"15406"	"15406"	"15378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"399.1"	""	"247.2"	""	"303.9"	""	"307.9"	"0.0"	"244.3"	"281.0"	""	"949"	"55"	"36.000"	"29.000"	"0.000143627042163407"	"28"	"0"	"7.557E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEPLMLSCK"	"[R].iGEPLmLSck.[G]"	"N-Term(TMT6plex); M6(Oxidation); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"805.93915"	"1610.87102"	"1610.87201"	"-0.62"	"-0.00050"	"9/82"	"9"	"82"	"2448867.8104248"	"HCD"	"MS2"	"18.11368"	"177.1"	"100.000"	"59.1018"	"18586"	"18586"	"18565"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.4"	""	"203.6"	""	"199.7"	""	"445.6"	""	"326.3"	"335.0"	""	"964"	"32"	"36.000"	"29.000"	"0.0320661661289239"	"18"	"0.0001889"	"0.0007543"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEPLMLSCK"	"[R].iGEPLmLSck.[G]"	"N-Term(TMT6plex); M6(Oxidation); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"805.93933"	"1610.87139"	"1610.87201"	"-0.39"	"-0.00031"	"15/82"	"15"	"82"	"1826214.28363037"	"HCD"	"MS2"	"9.769976"	"145.9"	"100.000"	"58.9428"	"18469"	"18469"	"18441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.9"	""	"171.0"	""	"172.4"	""	"370.4"	""	"278.0"	"260.8"	""	"962"	"22"	"36.000"	"29.000"	"0.281284030473495"	"15"	"0.001217"	"0.01749"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAPAFSSMSNK"	"[R].iAPAFSSMSNk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.95093"	"1610.89458"	"1610.89763"	"-1.90"	"-0.00153"	"10/88"	"10"	"88"	"1237057.50616455"	"HCD"	"MS2"	"100"	"104.9"	"100.000"	"44.4541"	"12634"	"12634"	"12604"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.7"	""	"147.2"	""	"147.6"	""	"131.4"	""	"199.2"	"218.2"	""	"929"	"49"	"36.000"	"29.000"	"0.000613741822079665"	"16"	"0"	"5.622E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAPAFSSMSNK"	"[R].iAPAFSSMSNk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"805.95129"	"1610.89531"	"1610.89763"	"-1.44"	"-0.00116"	"10/88"	"10"	"88"	"1020034.38452148"	"HCD"	"MS2"	"0"	"86.2"	"100.000"	"44.2407"	"12497"	"12497"	"12470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.3"	""	"122.2"	""	"117.7"	""	"101.6"	""	"169.2"	"188.2"	""	"919"	"45"	"36.000"	"29.000"	"0.00140050774773406"	"19"	"0"	"2.811E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAPAFSSMSNK"	"[R].iAPAFSSMSNk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"537.63770"	"1610.89853"	"1610.89763"	"0.56"	"0.00030"	"11/88"	"11"	"88"	"2792013.24768066"	"HCD"	"MS2"	"43.46838"	"129.9"	"100.000"	"44.3232"	"12531"	"12531"	"12502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.1"	""	"170.0"	""	"168.2"	""	"200.7"	""	"262.7"	"259.4"	""	"880"	"30"	"36.000"	"29.000"	"0.0410631892350676"	"14"	"0.0001308"	"0.0002586"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFGYNIPLK"	"[R].sNFGYNIPLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"3"	"3"	"0.5172"	"0.0000"	"1"	"1"	"1"	"537.64801"	"1610.92948"	"1610.93065"	"-0.73"	"-0.00039"	"11/88"	"11"	"88"	"17981429.1732178"	"HCD"	"MS2"	"3.761224"	"259.7"	"56.808"	"51.7185"	"15540"	"15540"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"404.5"	""	"341.2"	""	"386.6"	""	"415.4"	"0.1"	"445.1"	"464.8"	""	"746"	"29"	"35.000"	"28.000"	"0.0447413240074718"	"28"	"0.0001308"	"0.0002866"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFGYNIPLK"	"[R].sNFGYNIPLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"805.96875"	"1610.93022"	"1610.93065"	"-0.26"	"-0.00021"	"8/88"	"8"	"88"	"4766224.31646729"	"HCD"	"MS2"	"45.47203"	"377.8"	"100.000"	"51.8196"	"15632"	"15632"	"15606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"615.6"	""	"516.4"	""	"563.3"	""	"590.7"	"7.9"	"633.8"	"645.9"	""	"719"	"48"	"35.000"	"28.000"	"0.000621868981137829"	"23"	"0"	"3.81E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFGYNIPLK"	"[R].sNFGYNIPLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"805.96875"	"1610.93022"	"1610.93065"	"-0.26"	"-0.00021"	"16/88"	"16"	"88"	"6179934.85162354"	"HCD"	"MS2"	"18.81696"	"452.0"	"100.000"	"51.6519"	"15513"	"15513"	"15490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"760.7"	""	"603.1"	""	"686.7"	""	"682.0"	"4.9"	"761.0"	"776.6"	""	"719"	"55"	"35.000"	"28.000"	"0.000116868883410064"	"23"	"0"	"4.381E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFGYNIPLK"	"[R].sNFGYNIPLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"805.96893"	"1610.93059"	"1610.93065"	"-0.04"	"-0.00003"	"6/88"	"6"	"88"	"1071345.50097656"	"HCD"	"MS2"	"0"	"98.4"	"100.000"	"51.9716"	"15644"	"15644"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.7"	""	"135.5"	""	"138.0"	""	"164.7"	""	"168.7"	"186.2"	""	"718"	"34"	"35.000"	"28.000"	"0.0155630405341123"	"19"	"7.476E-05"	"0.0001898"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFGYNIPLK"	"[R].sNFGYNIPLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"537.64862"	"1610.93131"	"1610.93065"	"0.41"	"0.00022"	"9/88"	"9"	"88"	"17952847.0603027"	"HCD"	"MS2"	"3.927241"	"340.8"	"75.002"	"51.9211"	"15673"	"15673"	"15654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"530.9"	"3.4"	"474.6"	""	"505.5"	""	"513.2"	""	"618.2"	"580.2"	""	"748"	"29"	"35.000"	"28.000"	"0.0485145047348"	"18"	"0.0001308"	"0.0002676"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFGYNIPLK"	"[R].sNFGYNIPLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.96942"	"1610.93157"	"1610.93065"	"0.57"	"0.00046"	"13/88"	"13"	"88"	"1470095.58966064"	"HCD"	"MS2"	"3.246031"	"129.4"	"100.000"	"52.1235"	"15756"	"15756"	"15734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"185.7"	""	"177.1"	""	"187.2"	""	"207.5"	"0.2"	"224.2"	"243.3"	""	"739"	"39"	"35.000"	"28.000"	"0.00429155262814006"	"15"	"0.0001308"	"0.000218"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAVDSPFLK"	"[K].yLAVDSPFLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"805.98114"	"1610.95500"	"1610.95580"	"-0.50"	"-0.00040"	"16/74"	"16"	"74"	"1320692.33251953"	"HCD"	"MS2"	"30.08558"	"113.7"	"100.000"	"63.4682"	"20316"	"20316"	"20297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.1"	""	"171.8"	""	"174.4"	""	"177.1"	"0.6"	"199.4"	"181.8"	""	"557"	"54"	"34.000"	"27.000"	"0.000117172366005068"	""	"0"	"2.94E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAVDSPFLK"	"[K].yLAVDSPFLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"805.98163"	"1610.95598"	"1610.95580"	"0.11"	"0.00009"	"16/74"	"16"	"74"	"1291638.93200684"	"HCD"	"MS2"	"30.02536"	"109.3"	"100.000"	"63.5428"	"20400"	"20400"	"20371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.3"	""	"165.3"	""	"164.5"	""	"170.2"	""	"189.2"	"184.5"	""	"572"	"52"	"34.000"	"27.000"	"0.000178388162947972"	""	"0"	"1.877E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELMNVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"806.44366"	"1611.88005"	"1611.88165"	"-0.99"	"-0.00080"	"8/82"	"8"	"82"	"477789.532897949"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"46.2890"	"13329"	"13329"	"13304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.6"	""	"71.5"	""	"83.7"	""	"53.3"	""	"78.8"	"94.5"	""	"947"	"50"	"36.000"	"29.000"	"0.00047568557669682"	"22"	"0"	"5.518E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLWGSDYSK"	"[R].vVLWGSDYSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"806.46021"	"1611.91313"	"1611.91466"	"-0.95"	"-0.00077"	"9/78"	"9"	"78"	"3114455.28430176"	"HCD"	"MS2"	"11.4869"	"237.0"	"100.000"	"54.8680"	"16807"	"16807"	"16780"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.3"	""	"368.1"	""	"391.3"	""	"339.0"	""	"361.3"	"403.4"	""	"813"	"47"	"36.000"	"29.000"	"0.00077814503352107"	"17"	"0"	"2.896E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLWGSDYSK"	"[R].vVLWGSDYSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"537.97607"	"1611.91367"	"1611.91466"	"-0.62"	"-0.00033"	"12/78"	"12"	"78"	"5472057.46850586"	"HCD"	"MS2"	"13.19687"	"150.4"	"100.000"	"54.9276"	"16831"	"16831"	"16812"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.6"	""	"214.3"	""	"241.1"	""	"224.3"	""	"259.4"	"261.1"	""	"808"	"26"	"36.000"	"29.000"	"0.108238400322689"	"18"	"0.0001859"	"0.0003599"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLWGSDYSK"	"[R].vVLWGSDYSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"537.97626"	"1611.91422"	"1611.91466"	"-0.28"	"-0.00015"	"12/78"	"12"	"78"	"6591758.81311035"	"HCD"	"MS2"	"6.600733"	"156.0"	"100.000"	"55.1751"	"16986"	"16986"	"16965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.4"	""	"252.1"	""	"249.1"	"2.2"	"207.8"	"0.2"	"263.0"	"272.2"	""	"787"	"34"	"35.000"	"28.000"	"0.0166320099713515"	"18"	"0.0001308"	"0.000288"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLWGSDYSK"	"[R].vVLWGSDYSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"806.46124"	"1611.91521"	"1611.91466"	"0.34"	"0.00027"	"9/78"	"9"	"78"	"4281905.82183838"	"HCD"	"MS2"	"5.555106"	"303.8"	"100.000"	"55.0901"	"16951"	"16951"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"491.6"	""	"481.6"	""	"492.0"	""	"441.8"	"0.1"	"471.9"	"491.0"	""	"807"	"56"	"36.000"	"29.000"	"9.56849290234479E-05"	"18"	"0"	"4.149E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HHPHFLTHK"	"[K].hHPHFLTHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"4"	"4"	"0.9565"	"0.0000"	"1"	"1"	"1"	"403.73630"	"1611.92336"	"1611.92724"	"-2.40"	"-0.00097"	"5/64"	"5"	"64"	"3693521.8404541"	"HCD"	"MS2"	"3.173064"	"149.2"	"100.000"	"22.5663"	"3732"	"3732"	"3720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.8"	""	"216.1"	""	"194.3"	""	"236.3"	""	"281.5"	"314.9"	""	"754"	"23"	"35.000"	"28.000"	"0.172719491291379"	"15"	"0"	"0.0001795"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HHPHFLTHK"	"[K].hHPHFLTHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"4"	"4"	"0.9286"	"0.0000"	"1"	"1"	"1"	"403.73660"	"1611.92458"	"1611.92724"	"-1.65"	"-0.00066"	"5/64"	"5"	"64"	"3418478.2744751"	"HCD"	"MS2"	"5.384972"	"146.7"	"100.000"	"22.5742"	"3769"	"3769"	"3753"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.0"	""	"217.9"	""	"208.1"	""	"236.7"	"4.6"	"262.8"	"294.9"	""	"758"	"28"	"35.000"	"28.000"	"0.0559292776111564"	"16"	"0"	"0.0001306"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HHPHFLTHK"	"[K].hHPHFLTHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"537.97986"	"1611.92502"	"1611.92724"	"-1.37"	"-0.00074"	"7/64"	"7"	"64"	"1110011.07580566"	"HCD"	"MS2"	"26.64509"	"37.9"	"100.000"	"22.4861"	"3701"	"3701"	"3696"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.6"	""	"53.1"	""	"53.7"	""	"65.3"	"1.6"	"66.1"	"76.6"	""	"749"	"31"	"35.000"	"28.000"	"0.0296791748264937"	"14"	"0"	"8.574E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HHPHFLTHK"	"[K].hHPHFLTHk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"537.98016"	"1611.92594"	"1611.92724"	"-0.81"	"-0.00043"	"7/64"	"7"	"64"	"1116741.85302734"	"HCD"	"MS2"	"32.87333"	"39.3"	"100.000"	"22.5078"	"3743"	"3743"	"3736"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.1"	""	"45.1"	""	"60.7"	""	"64.2"	""	"79.9"	"84.2"	""	"731"	"33"	"35.000"	"28.000"	"0.0179014158479167"	"15"	"0"	"6.543E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITTTISPLLLIP"	"[R].tITTTISPLLLIP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.50964"	"1612.01201"	"1612.01343"	"-0.88"	"-0.00071"	"6/110"	"6"	"110"	"79766.834777832"	"HCD"	"MS2"	"11.46877"	"0.3"	"100.000"	"102.8179"	"34801"	"34801"	"34799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	""	""	"3.1"	""	""	"228"	"31"	"30.000"	"23.000"	"0.00981532877490445"	"14"	"0.0007793"	"0.007261"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITTTISPLLLIP"	"[R].tITTTISPLLLIP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.50989"	"1612.01250"	"1612.01343"	"-0.58"	"-0.00046"	"4/110"	"4"	"110"	"95023.047668457"	"HCD"	"MS2"	"0"	"0.6"	"100.000"	"103.3265"	"34906"	"34906"	"34903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	"2.8"	""	""	""	"2.9"	""	""	"228"	"6"	"30.000"	"23.000"	"2.60558263584799"	"13"	"0.004883"	"0.1449"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITTTISPLLLIP"	"[R].tITTTISPLLLIP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.50995"	"1612.01262"	"1612.01343"	"-0.50"	"-0.00040"	"5/110"	"5"	"110"	"110090.345703125"	"HCD"	"MS2"	"19.44169"	"2.4"	"100.000"	"103.1552"	"34864"	"34864"	"34861"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.3"	""	""	""	"4.4"	""	"4.5"	""	"6.1"	"5.5"	""	"228"	"19"	"30.000"	"23.000"	"0.131796795609899"	"14"	"0.001966"	"0.02838"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITTTISPLLLIP"	"[R].tITTTISPLLLIP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.51019"	"1612.01311"	"1612.01343"	"-0.20"	"-0.00016"	"8/110"	"8"	"110"	"851081.897644043"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"103.0722"	"34853"	"34853"	"34851"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.1"	""	"5.7"	""	"3.2"	""	"5.2"	""	"5.6"	"7.9"	""	"228"	"60"	"30.000"	"23.000"	"1.16655401120006E-05"	"16"	"7.476E-05"	"0.0002005"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITTTISPLLLIP"	"[R].tITTTISPLLLIP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.51062"	"1612.01396"	"1612.01343"	"0.33"	"0.00027"	"8/110"	"8"	"110"	"876002.444702148"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"102.9028"	"34812"	"34812"	"34810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"3.7"	""	"4.0"	""	"7.3"	""	"8.1"	"7.7"	""	"226"	"55"	"30.000"	"23.000"	"3.49203383874036E-05"	"16"	"0.0001308"	"0.0002824"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITTTISPLLLIP"	"[R].tITTTISPLLLIP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"P20291"	"Arachidonate 5-lipoxygenase-activating protein OS=Rattus norvegicus OX=10116 GN=Alox5ap PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.51093"	"1612.01457"	"1612.01343"	"0.71"	"0.00057"	"6/110"	"6"	"110"	"170250.475036621"	"HCD"	"MS2"	"8.47926"	"0.6"	"100.000"	"102.6496"	"34759"	"34759"	"34756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	"3.5"	""	"2.5"	""	""	"227"	"37"	"30.000"	"23.000"	"0.00247739844994181"	"15"	"0.00175"	"0.02455"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLNLPNVGIK"	"[K].vSLNLPNVGIk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P17256"	"Mevalonate kinase OS=Rattus norvegicus OX=10116 GN=Mvk PE=1 SV=1"	"P17256"	"Mevalonate kinase OS=Rattus norvegicus OX=10116 GN=Mvk PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"538.01160"	"1612.02024"	"1612.01980"	"0.27"	"0.00015"	"8/94"	"8"	"94"	"2100834.79675293"	"HCD"	"MS2"	"45.04771"	"82.3"	"100.000"	"61.2608"	"19468"	"19468"	"19443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.6"	""	"109.5"	""	"115.0"	""	"142.6"	""	"152.5"	"150.5"	""	"208"	"14"	"30.000"	"23.000"	"0.429569402069768"	"14"	"0.0002277"	"0.001144"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFDAVGFTFPNR"	"[R].iFDAVGFTFPNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"806.93719"	"1612.86711"	"1612.86849"	"-0.86"	"-0.00069"	"7/100"	"7"	"100"	"401545.93170166"	"HCD"	"MS2"	"26.94162"	"27.9"	"100.000"	"73.6207"	"24505"	"24505"	"24479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.9"	""	"34.7"	""	"37.1"	""	"40.5"	""	"50.0"	"61.3"	""	"949"	"37"	"36.000"	"29.000"	"0.0101914555997494"	"25"	"0"	"5.299E-05"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFDAVGFTFPNR"	"[R].iFDAVGFTFPNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"806.93762"	"1612.86797"	"1612.86849"	"-0.33"	"-0.00026"	"8/100"	"8"	"100"	"406360.716491699"	"HCD"	"MS2"	"12.38244"	"29.6"	"100.000"	"73.5975"	"24444"	"24444"	"24417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.1"	""	"43.5"	""	"39.2"	""	"40.6"	"0.3"	"46.7"	"62.5"	""	"944"	"38"	"36.000"	"29.000"	"0.00753254957495738"	"25"	"0"	"6.738E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYGDTLVTGFAR"	"[K].aLYGDTLVTGFAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"806.94922"	"1612.89116"	"1612.88962"	"0.95"	"0.00077"	"8/104"	"8"	"104"	"809281.481567383"	"HCD"	"MS2"	"23.89008"	"57.5"	"100.000"	"57.3020"	"17856"	"17856"	"17829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.4"	""	"83.9"	""	"85.2"	""	"90.5"	"1.4"	"101.7"	"102.2"	""	"880"	"45"	"36.000"	"29.000"	"0.00132572265064189"	"16"	"0"	"7.361E-06"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"806.95245"	"1612.89763"	"1612.89868"	"-0.65"	"-0.00052"	"8/76"	"8"	"76"	"3217494.88140869"	"HCD"	"MS2"	"12.36874"	"280.9"	"100.000"	"60.2304"	"19047"	"19047"	"19027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.7"	""	"298.1"	""	"317.4"	""	"511.9"	""	"618.3"	"622.2"	""	"838"	"45"	"36.000"	"29.000"	"0.00133111023560226"	"23"	"0"	"0.0001379"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFQEIFDK"	"[K].dIFQEIFDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"538.30414"	"1612.89786"	"1612.89868"	"-0.51"	"-0.00027"	"6/88"	"6"	"88"	"1107619.98620605"	"HCD"	"MS2"	"12.67986"	"29.5"	"100.000"	"79.4801"	"26884"	"26884"	"26863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.2"	""	"36.3"	""	"30.6"	""	"54.3"	""	"65.1"	"60.8"	""	"838"	"30"	"36.000"	"29.000"	"0.038037680214466"	"22"	"0.0001889"	"0.0003918"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFQEIFDK"	"[K].dIFQEIFDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"538.30420"	"1612.89804"	"1612.89868"	"-0.39"	"-0.00021"	"6/88"	"6"	"88"	"971588.944763184"	"HCD"	"MS2"	"12.97112"	"26.2"	"100.000"	"79.5316"	"26854"	"26854"	"26833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.4"	""	"31.6"	""	"29.9"	""	"51.6"	"1.2"	"47.7"	"54.5"	""	"827"	"29"	"36.000"	"29.000"	"0.0483587998186716"	"19"	"0.0001859"	"0.0003152"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFQEIFDK"	"[K].dIFQEIFDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"538.30420"	"1612.89804"	"1612.89868"	"-0.39"	"-0.00021"	"6/88"	"6"	"88"	"2046006.00097656"	"HCD"	"MS2"	"42.01376"	"50.4"	"100.000"	"79.1612"	"26754"	"26754"	"26735"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.2"	""	"56.8"	""	"67.5"	""	"85.6"	""	"100.5"	"103.5"	""	"827"	"27"	"36.000"	"29.000"	"0.0786095868748284"	"24"	"0.0001859"	"0.000315"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"538.30420"	"1612.89804"	"1612.89868"	"-0.39"	"-0.00021"	"5/76"	"5"	"76"	"3232247.26361084"	"HCD"	"MS2"	"8.74325"	"106.6"	"100.000"	"60.3549"	"19098"	"19098"	"19075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.7"	""	"119.4"	""	"136.2"	""	"179.5"	""	"235.8"	"227.5"	""	"827"	"31"	"36.000"	"29.000"	"0.0305826781236581"	"22"	"0.0006037"	"0.004641"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFQEIFDK"	"[K].dIFQEIFDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"806.95300"	"1612.89873"	"1612.89868"	"0.03"	"0.00002"	"7/88"	"7"	"88"	"1854003.125"	"HCD"	"MS2"	"0"	"147.2"	"100.000"	"79.4293"	"26864"	"26864"	"26847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.6"	""	"136.5"	""	"179.7"	""	"247.5"	"0.7"	"312.4"	"342.7"	""	"823"	"50"	"36.000"	"29.000"	"0.00039117387258956"	"26"	"0"	"9.101E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"806.95300"	"1612.89873"	"1612.89868"	"0.03"	"0.00002"	"6/76"	"6"	"76"	"1183019.8494873"	"HCD"	"MS2"	"0"	"117.8"	"100.000"	"60.5507"	"19178"	"19178"	"19155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.0"	""	"122.8"	""	"152.3"	""	"198.3"	"1.3"	"258.3"	"263.1"	""	"823"	"35"	"36.000"	"29.000"	"0.0128638165957151"	"22"	"0"	"0.0001399"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFQEIFDK"	"[K].dIFQEIFDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"806.95306"	"1612.89885"	"1612.89868"	"0.11"	"0.00009"	"7/88"	"7"	"88"	"882697.936645508"	"HCD"	"MS2"	"1.767053"	"79.2"	"100.000"	"79.5246"	"26851"	"26851"	"26833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.3"	""	"82.0"	""	"84.9"	""	"146.6"	"0.4"	"172.4"	"163.0"	""	"838"	"50"	"36.000"	"29.000"	"0.00041803632674165"	"27"	"0"	"2.633E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFQEIFDK"	"[K].dIFQEIFDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"806.95306"	"1612.89885"	"1612.89868"	"0.11"	"0.00009"	"7/88"	"7"	"88"	"1332126.84942627"	"HCD"	"MS2"	"6.547927"	"108.8"	"100.000"	"79.1220"	"26738"	"26738"	"26719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.2"	""	"107.0"	""	"127.1"	""	"210.3"	"0.6"	"221.3"	"219.2"	""	"838"	"50"	"36.000"	"29.000"	"0.000427773643673519"	"29"	"0"	"5.833E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFQEIFDK"	"[K].dIFQEIFDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"538.30450"	"1612.89896"	"1612.89868"	"0.17"	"0.00009"	"5/88"	"5"	"88"	"2413694.34234619"	"HCD"	"MS2"	"33.36528"	"64.6"	"100.000"	"79.2155"	"26725"	"26725"	"26705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.7"	""	"62.5"	""	"75.9"	""	"113.9"	""	"128.4"	"152.7"	""	"835"	"33"	"36.000"	"29.000"	"0.0208284273514555"	"24"	"0"	"0.0001764"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"538.30457"	"1612.89914"	"1612.89868"	"0.29"	"0.00015"	"7/76"	"7"	"76"	"2897347.03027344"	"HCD"	"MS2"	"15.5863"	"96.2"	"100.000"	"60.1568"	"18964"	"18964"	"18937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.7"	""	"114.4"	""	"133.1"	""	"160.5"	""	"205.7"	"192.1"	""	"834"	"37"	"36.000"	"29.000"	"0.00785481670317246"	"24"	"0.0003839"	"0.002062"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFQEIFDK"	"[K].dIFQEIFDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"806.95331"	"1612.89934"	"1612.89868"	"0.41"	"0.00033"	"7/88"	"7"	"88"	"2398332.91949463"	"HCD"	"MS2"	"5.130899"	"202.2"	"100.000"	"79.2061"	"26722"	"26722"	"26705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.7"	""	"200.4"	""	"242.7"	""	"366.7"	""	"410.6"	"435.3"	""	"836"	"47"	"36.000"	"29.000"	"0.000769442696614023"	"26"	"0"	"0.0001283"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"806.95355"	"1612.89983"	"1612.89868"	"0.71"	"0.00057"	"8/76"	"8"	"76"	"3059379.49707031"	"HCD"	"MS2"	"28.12395"	"284.1"	"100.000"	"60.0829"	"18934"	"18934"	"18905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.7"	""	"324.1"	""	"321.9"	""	"519.6"	""	"584.6"	"643.1"	""	"835"	"47"	"36.000"	"29.000"	"0.000825384824746703"	"24"	"0"	"0.0001327"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"806.95367"	"1612.90007"	"1612.89868"	"0.86"	"0.00070"	"8/76"	"8"	"76"	"1490538.3145752"	"HCD"	"MS2"	"0"	"146.8"	"100.000"	"60.3734"	"19052"	"19052"	"19033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.5"	""	"148.8"	""	"177.0"	""	"248.8"	"1.6"	"323.3"	"349.0"	""	"824"	"47"	"36.000"	"29.000"	"0.00087881450421639"	"23"	"0"	"7.517E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAFVNWINK"	"[K].yAFVNWINk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"538.31250"	"1612.92295"	"1612.92517"	"-1.38"	"-0.00074"	"9/74"	"9"	"74"	"2143443.83001709"	"HCD"	"MS2"	"15.66584"	"62.0"	"100.000"	"66.1161"	"21398"	"21398"	"21369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.2"	""	"97.4"	""	"98.9"	""	"94.6"	""	"104.3"	"118.8"	""	"687"	"15"	"35.000"	"28.000"	"0.970346271383545"	"13"	"0.0004166"	"0.002353"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAFVNWINK"	"[K].yAFVNWINk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.96533"	"1612.92339"	"1612.92517"	"-1.11"	"-0.00089"	"8/74"	"8"	"74"	"812128.569458008"	"HCD"	"MS2"	"11.13374"	"71.7"	"100.000"	"66.0414"	"21420"	"21420"	"21395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.2"	""	"94.2"	""	"104.6"	""	"117.4"	"0.4"	"116.2"	"145.9"	""	"687"	"47"	"35.000"	"28.000"	"0.000739480525877822"	"15"	"0"	"7.872E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAFVNWINK"	"[K].yAFVNWINk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"538.31299"	"1612.92441"	"1612.92517"	"-0.47"	"-0.00025"	"9/74"	"9"	"74"	"5830554.09533691"	"HCD"	"MS2"	"0"	"153.8"	"100.000"	"65.7776"	"21259"	"21259"	"21241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.0"	""	"207.2"	""	"247.0"	""	"266.4"	""	"252.6"	"274.6"	""	"678"	"28"	"35.000"	"28.000"	"0.0589114480946038"	"17"	"0.0003839"	"0.00168"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAFVNWINK"	"[K].yAFVNWINk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"806.96588"	"1612.92449"	"1612.92517"	"-0.42"	"-0.00034"	"7/74"	"7"	"74"	"4180090.89001465"	"HCD"	"MS2"	"0"	"313.0"	"100.000"	"65.7074"	"21284"	"21284"	"21267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"451.7"	""	"436.2"	""	"505.6"	""	"502.2"	"3.6"	"506.7"	"555.2"	""	"679"	"50"	"35.000"	"28.000"	"0.000361276554687155"	"18"	"0.0001308"	"0.0002319"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAFVNWINK"	"[K].yAFVNWINk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"538.31305"	"1612.92459"	"1612.92517"	"-0.36"	"-0.00019"	"9/74"	"9"	"74"	"6549399.44256592"	"HCD"	"MS2"	"0"	"161.4"	"100.000"	"65.7211"	"21289"	"21289"	"21267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.2"	""	"213.7"	""	"245.8"	""	"277.4"	"2.1"	"268.5"	"297.2"	""	"679"	"29"	"35.000"	"28.000"	"0.0424462940758916"	"22"	"0.0004557"	"0.00253"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAFVNWINK"	"[K].yAFVNWINk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"806.96667"	"1612.92607"	"1612.92517"	"0.56"	"0.00045"	"7/74"	"7"	"74"	"1384810.84112549"	"HCD"	"MS2"	"0"	"118.0"	"100.000"	"66.0585"	"21374"	"21374"	"21353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.7"	""	"155.5"	""	"192.7"	""	"181.5"	"0.4"	"189.5"	"225.0"	""	"680"	"49"	"35.000"	"28.000"	"0.000383247135099674"	"19"	"0"	"8.136E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKFEDMAK"	"[K].gkFEDMAk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"538.31561"	"1612.93229"	"1612.93358"	"-0.80"	"-0.00043"	"6/70"	"6"	"70"	"35138808.3046875"	"HCD"	"MS2"	"29.04071"	"1306.5"	"55.556"	"34.4852"	"8557"	"8557"	"8538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2504.6"	""	"2163.3"	""	"2161.8"	""	"1421.6"	""	"2020.1"	"2068.3"	""	"679"	"5"	"35.000"	"28.000"	"11.5037591009259"	"13"	"0.004726"	"0.1375"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKFEDMAK"	"[K].gkFEDMAk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"538.31580"	"1612.93283"	"1612.93358"	"-0.46"	"-0.00025"	"6/70"	"6"	"70"	"28036402.7352905"	"HCD"	"MS2"	"40.54677"	"1542.4"	"79.577"	"34.4193"	"8487"	"8487"	"8467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2906.8"	""	"2521.9"	""	"2511.5"	""	"1747.5"	""	"2354.5"	"2529.0"	""	"681"	"4"	"35.000"	"28.000"	"12.7091678729443"	"13"	"0.001966"	"0.02908"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKFEDMAK"	"[K].gkFEDMAk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"806.97021"	"1612.93315"	"1612.93358"	"-0.26"	"-0.00021"	"7/70"	"7"	"70"	"340731.922485352"	"HCD"	"MS2"	"0"	"36.1"	"100.000"	"34.5151"	"8527"	"8527"	"8499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.3"	""	"57.0"	""	"63.4"	""	"34.1"	""	"57.1"	"59.3"	""	"642"	"22"	"35.000"	"28.000"	"0.190767782915599"	"19"	"0.0002723"	"0.001376"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIPSGYFK"	"[K].iETIPSGYFk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"538.31592"	"1612.93320"	"1612.93507"	"-1.16"	"-0.00062"	"12/80"	"12"	"80"	"6162569.63879395"	"HCD"	"MS2"	"24.53306"	"192.3"	"100.000"	"55.3518"	"17059"	"17059"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.5"	""	"131.3"	""	"145.9"	""	"427.7"	""	"527.9"	"482.4"	""	"642"	"35"	"35.000"	"28.000"	"0.010851881242212"	"17"	"0.0001859"	"0.0003219"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIPSGYFK"	"[K].iETIPSGYFk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"538.31702"	"1612.93650"	"1612.93507"	"0.89"	"0.00048"	"12/80"	"12"	"80"	"7689715.22729492"	"HCD"	"MS2"	"17.36759"	"219.5"	"100.000"	"55.2034"	"16944"	"16944"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.4"	""	"130.7"	""	"139.8"	""	"507.9"	""	"601.2"	"590.0"	""	"633"	"36"	"35.000"	"28.000"	"0.00776915371814312"	"21"	"0"	"0.0001676"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIPSGYFK"	"[K].iETIPSGYFk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"806.97211"	"1612.93694"	"1612.93507"	"1.16"	"0.00094"	"9/80"	"9"	"80"	"7661245.48443604"	"HCD"	"MS2"	"16.94917"	"442.1"	"100.000"	"55.1712"	"16931"	"16931"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"429.0"	""	"358.0"	""	"387.5"	""	"878.8"	"5.1"	"1069.1"	"1086.3"	""	"633"	"31"	"35.000"	"28.000"	"0.0247955481935506"	"17"	"0"	"0.0001438"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIPSGYFK"	"[K].iETIPSGYFk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"806.97211"	"1612.93694"	"1612.93507"	"1.16"	"0.00094"	"7/80"	"7"	"80"	"9106530.15350342"	"HCD"	"MS2"	"20.72676"	"450.6"	"100.000"	"55.3726"	"17067"	"17067"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"495.7"	""	"415.2"	""	"392.1"	""	"820.2"	"6.2"	"1076.9"	"1086.2"	""	"633"	"22"	"35.000"	"28.000"	"0.183389182419108"	"17"	"0.0006037"	"0.004266"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLFNNAMK"	"[R].sSGSLFNNAMk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.43927"	"1613.87126"	"1613.87215"	"-0.55"	"-0.00044"	"15/94"	"15"	"94"	"1326587.15795898"	"HCD"	"MS2"	"0"	"137.4"	"100.000"	"40.9787"	"11219"	"11219"	"11197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.1"	""	"273.7"	""	"194.2"	""	"168.6"	""	"196.0"	"211.7"	""	"857"	"32"	"36.000"	"29.000"	"0.0261788657672037"	"15"	"0"	"5.066E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLFNNAMK"	"[R].sSGSLFNNAMk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"538.62897"	"1613.87235"	"1613.87215"	"0.12"	"0.00007"	"13/94"	"13"	"94"	"42839125.4423828"	"HCD"	"MS2"	"15.49744"	"311.6"	"27.700"	"40.5845"	"11014"	"11014"	"10997"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"606.6"	""	"560.3"	""	"434.2"	""	"404.8"	"0.2"	"452.8"	"482.1"	""	"840"	"29"	"36.000"	"29.000"	"0.0581097879168148"	"21"	"0.0001889"	"0.0004124"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLFNNAMK"	"[R].sSGSLFNNAMk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"538.62897"	"1613.87235"	"1613.87215"	"0.12"	"0.00007"	"13/94"	"13"	"94"	"38591894.5074463"	"HCD"	"MS2"	"19.95593"	"411.8"	"42.539"	"40.7356"	"11119"	"11119"	"11101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"773.2"	""	"749.3"	""	"563.2"	""	"530.3"	"2.0"	"620.7"	"649.6"	""	"840"	"30"	"36.000"	"29.000"	"0.0398335754586376"	"17"	"0.0001889"	"0.0004337"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLFNNAMK"	"[R].sSGSLFNNAMk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"807.43994"	"1613.87261"	"1613.87215"	"0.28"	"0.00023"	"16/94"	"16"	"94"	"9619680.30908203"	"HCD"	"MS2"	"0"	"818.3"	"100.000"	"40.5200"	"10987"	"10987"	"10965"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1794.8"	""	"1564.3"	""	"1116.5"	""	"995.6"	"3.3"	"1090.4"	"1147.1"	""	"845"	"60"	"36.000"	"29.000"	"4.46505397642771E-05"	"19"	"0"	"1.924E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLFNNAMK"	"[R].sSGSLFNNAMk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.44006"	"1613.87285"	"1613.87215"	"0.44"	"0.00035"	"17/94"	"17"	"94"	"7637434.34472656"	"HCD"	"MS2"	"0"	"677.4"	"100.000"	"40.6738"	"11094"	"11094"	"11069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1398.6"	""	"1321.5"	""	"979.7"	""	"848.1"	""	"898.1"	"943.1"	""	"845"	"33"	"36.000"	"29.000"	"0.0221731151955529"	"15"	"0"	"6.316E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STCLYGQLPK"	"[K].sTcLYGQLPk.[F]"	"N-Term(TMT6plex); C3(Methylthio); K10(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"807.44232"	"1613.87737"	"1613.87954"	"-1.35"	"-0.00109"	"8/80"	"8"	"80"	"339947.632507324"	"HCD"	"MS2"	"0"	"36.1"	"100.000"	"49.1226"	"14536"	"14536"	"14511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.9"	""	"43.4"	""	"39.4"	""	"79.9"	"0.9"	"77.9"	"65.7"	""	"862"	"35"	"36.000"	"29.000"	"0.0127490337308372"	"21"	"0.0001859"	"0.0003718"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STCLYGQLPK"	"[K].sTcLYGQLPk.[F]"	"N-Term(TMT6plex); C3(Methylthio); K10(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"807.44458"	"1613.88188"	"1613.87954"	"1.45"	"0.00117"	"9/80"	"9"	"80"	"303743.287414551"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"48.8565"	"14380"	"14380"	"14351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.5"	""	"43.9"	""	"48.9"	""	"60.8"	""	"65.4"	"71.2"	""	"867"	"16"	"36.000"	"29.000"	"1.11683522156062"	"17"	"0.001058"	"0.01373"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTSSWLVTPK"	"[R].hTSSWLVTPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"538.64978"	"1613.93479"	"1613.94155"	"-4.19"	"-0.00225"	"8/84"	"8"	"84"	"161231152.09375"	"HCD"	"MS2"	"14.38648"	"462.6"	"13.977"	"36.2214"	"9227"	"9227"	"9210"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"844.4"	""	"740.6"	""	"651.6"	""	"900.7"	"1.5"	"575.8"	"646.3"	""	"766"	"39"	"35.000"	"28.000"	"0.00500263450154495"	"28"	"0.0001859"	"0.0003599"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTSSWLVTPK"	"[R].hTSSWLVTPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.5938"	"0.0000"	"1"	"1"	"1"	"538.64996"	"1613.93534"	"1613.94155"	"-3.85"	"-0.00207"	"7/84"	"7"	"84"	"172164616.682129"	"HCD"	"MS2"	"13.55006"	"491.5"	"13.319"	"36.3084"	"9306"	"9306"	"9289"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"896.2"	""	"796.2"	""	"677.1"	""	"937.2"	"0.1"	"630.2"	"698.0"	""	"788"	"32"	"35.000"	"28.000"	"0.0260913302458494"	"27"	"0.0001889"	"0.000414"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTSSWLVTPK"	"[R].hTSSWLVTPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9310"	"0.0000"	"1"	"1"	"1"	"404.24023"	"1613.93911"	"1613.94155"	"-1.51"	"-0.00061"	"9/84"	"9"	"84"	"28437936.0612793"	"HCD"	"MS2"	"4.891019"	"355.2"	"36.698"	"36.3838"	"9293"	"9293"	"9274"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"648.2"	""	"592.0"	""	"504.3"	""	"662.3"	"0.8"	"433.5"	"507.8"	""	"731"	"29"	"35.000"	"28.000"	"0.0471940644505747"	"17"	"0.0001889"	"0.00103"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTSSWLVTPK"	"[R].hTSSWLVTPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"538.65149"	"1613.93991"	"1613.94155"	"-1.01"	"-0.00054"	"8/84"	"8"	"84"	"39362802.7348633"	"HCD"	"MS2"	"16.71033"	"248.4"	"20.630"	"36.6247"	"9435"	"9435"	"9415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"430.3"	""	"365.9"	""	"332.9"	""	"423.0"	"4.8"	"365.9"	"424.3"	""	"718"	"31"	"35.000"	"28.000"	"0.0274849181881141"	"22"	"0.0001308"	"0.0002502"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTSSWLVTPK"	"[R].hTSSWLVTPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"538.65149"	"1613.93991"	"1613.94155"	"-1.01"	"-0.00054"	"10/84"	"10"	"84"	"34133798.7264404"	"HCD"	"MS2"	"16.60657"	"341.0"	"30.585"	"36.5396"	"9357"	"9357"	"9338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"547.0"	""	"514.1"	""	"432.9"	""	"577.2"	"4.6"	"566.1"	"584.5"	""	"718"	"25"	"35.000"	"28.000"	"0.113787471923261"	"22"	"0.0001308"	"0.0002576"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTSSWLVTPK"	"[R].hTSSWLVTPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9032"	"0.0000"	"1"	"1"	"1"	"404.24063"	"1613.94069"	"1613.94155"	"-0.53"	"-0.00021"	"9/84"	"9"	"84"	"37120599.4057617"	"HCD"	"MS2"	"6.188003"	"681.8"	"56.783"	"36.3587"	"9326"	"9326"	"9305"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1260.9"	""	"1127.5"	""	"970.7"	""	"1320.0"	"2.6"	"834.2"	"910.0"	""	"713"	"31"	"35.000"	"28.000"	"0.0291111615389338"	"18"	"0.0001889"	"0.001111"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTSSWLVTPK"	"[R].hTSSWLVTPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"807.47443"	"1613.94158"	"1613.94155"	"0.02"	"0.00001"	"8/84"	"8"	"84"	"3830062.38739014"	"HCD"	"MS2"	"0"	"257.6"	"100.000"	"36.3655"	"9329"	"9329"	"9305"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"470.9"	""	"438.1"	""	"356.7"	""	"496.0"	""	"318.1"	"353.6"	""	"703"	"35"	"35.000"	"28.000"	"0.0116929832982843"	"18"	"0"	"0.0001381"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTSSWLVTPK"	"[R].hTSSWLVTPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"807.47540"	"1613.94353"	"1613.94155"	"1.23"	"0.00099"	"8/84"	"8"	"84"	"3926752.84869385"	"HCD"	"MS2"	"0"	"259.9"	"100.000"	"36.2556"	"9241"	"9241"	"9210"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"471.1"	""	"441.6"	""	"363.2"	""	"503.3"	""	"322.2"	"350.5"	""	"705"	"36"	"35.000"	"28.000"	"0.00906064513426024"	"21"	"7.476E-05"	"0.0001861"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGLLGINIAEK"	"[K].qGLLGINIAEk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.6721"	"0.0000"	"1"	"1"	"1"	"807.50250"	"1613.99773"	"1613.99906"	"-0.83"	"-0.00067"	"10/100"	"10"	"100"	"4036955.8081665"	"HCD"	"MS2"	"0"	"290.9"	"100.000"	"56.8021"	"17597"	"17597"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"558.4"	""	"430.5"	""	"413.3"	""	"377.7"	""	"482.4"	"487.3"	""	"365"	"61"	"32.000"	"25.000"	"1.56409406754542E-05"	""	"0"	"1.938E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGLLGINIAEK"	"[K].qGLLGINIAEk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"3"	"3"	"0.7455"	"0.0000"	"1"	"1"	"1"	"538.67090"	"1613.99814"	"1613.99906"	"-0.57"	"-0.00031"	"8/100"	"8"	"100"	"4685646.66564941"	"HCD"	"MS2"	"15.70765"	"136.4"	"100.000"	"57.1318"	"17786"	"17786"	"17765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.6"	""	"193.1"	""	"188.2"	""	"214.8"	"1.5"	"225.5"	"235.3"	""	"362"	"55"	"32.000"	"25.000"	"6.11897353532827E-05"	""	"0"	"6.237E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGLLGINIAEK"	"[K].qGLLGINIAEk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"3"	"3"	"0.7547"	"0.0000"	"1"	"1"	"1"	"538.67114"	"1613.99887"	"1613.99906"	"-0.12"	"-0.00006"	"8/100"	"8"	"100"	"4828609.42889404"	"HCD"	"MS2"	"13.12623"	"136.2"	"100.000"	"56.9306"	"17650"	"17650"	"17627"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.8"	""	"183.7"	""	"196.0"	""	"201.6"	""	"232.3"	"242.9"	""	"365"	"53"	"32.000"	"25.000"	"0.000100291209479016"	""	"0"	"5.276E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGLLGINIAEK"	"[K].qGLLGINIAEk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.5692"	"0.0000"	"1"	"1"	"1"	"807.50317"	"1613.99907"	"1613.99906"	"0.01"	"0.00000"	"9/100"	"9"	"100"	"4350922.32385254"	"HCD"	"MS2"	"1.981375"	"326.6"	"100.000"	"57.0121"	"17737"	"17737"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"621.0"	""	"475.4"	""	"467.4"	""	"455.1"	""	"510.9"	"557.0"	""	"357"	"65"	"32.000"	"25.000"	"5.92431606731409E-06"	""	"0"	"1.595E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].iMNVIGEPIDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"807.93945"	"1614.87163"	"1614.87226"	"-0.39"	"-0.00031"	"7/114"	"7"	"114"	"601363.260009766"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"54.9590"	"16898"	"16898"	"16869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.4"	""	"54.4"	""	"66.3"	""	"69.8"	"1.0"	"87.1"	"90.2"	""	"959"	"37"	"36.000"	"29.000"	"0.0106853465407511"	"16"	"0.0001889"	"0.000661"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].iMNVIGEPIDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"807.94073"	"1614.87419"	"1614.87226"	"1.20"	"0.00097"	"8/114"	"8"	"114"	"818981.416564941"	"HCD"	"MS2"	"0"	"54.7"	"100.000"	"54.7300"	"16751"	"16751"	"16720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.1"	""	"66.0"	""	"73.0"	""	"68.6"	"1.5"	"103.5"	"109.6"	""	"961"	"64"	"36.000"	"29.000"	"2.04029700476203E-05"	"21"	"0"	"9.105E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNTLEEILEVLR"	"[K].gNTLEEILEVLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.96680"	"1614.92632"	"1614.92640"	"-0.05"	"-0.00004"	"9/120"	"9"	"120"	"159338.165222168"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"89.5931"	"30879"	"30879"	"30866"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.9"	""	"14.3"	""	"12.7"	""	"24.7"	""	"16.5"	"17.0"	""	"886"	"51"	"36.000"	"29.000"	"0.000339159296861687"	"16"	"0"	"8.842E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPEPFFALAK"	"[K].hPEPFFALAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"538.98444"	"1614.93875"	"1614.94082"	"-1.28"	"-0.00069"	"7/72"	"7"	"72"	"2597465.04754639"	"HCD"	"MS2"	"10.84977"	"104.8"	"100.000"	"44.9427"	"12783"	"12783"	"12752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.7"	""	"137.4"	""	"164.6"	""	"155.5"	""	"192.9"	"183.7"	""	"816"	"24"	"36.000"	"29.000"	"0.168523380811986"	"15"	"0.0001889"	"0.0006395"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPEPFFALAK"	"[K].hPEPFFALAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"Q5RJQ4"	"NAD-dependent protein deacetylase sirtuin-2 OS=Rattus norvegicus OX=10116 GN=Sirt2 PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"538.98480"	"1614.93985"	"1614.94082"	"-0.60"	"-0.00032"	"7/72"	"7"	"72"	"3775446.53778076"	"HCD"	"MS2"	"26.56832"	"126.7"	"100.000"	"45.1218"	"12905"	"12905"	"12875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.6"	""	"179.6"	""	"196.8"	""	"201.3"	""	"195.9"	"214.3"	""	"811"	"31"	"36.000"	"29.000"	"0.0310449424102514"	"20"	"0"	"9.131E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLFGPPGTGK"	"[KR].gILLFGPPGTGk.[TS]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q6GX84; Q793F9"	"Fidgetin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fignl1 PE=2 SV=1; Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.00232"	"1614.99736"	"1614.99833"	"-0.60"	"-0.00049"	"14/88"	"14"	"88"	"4217107.93927002"	"HCD"	"MS2"	"64.17771"	"243.3"	"100.000"	"63.3375"	"20316"	"20316"	"20291"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"435.9"	""	"384.6"	""	"409.2"	""	"270.1"	""	"389.2"	"412.5"	""	"378"	"12"	"32.000"	"25.000"	"1.21747991182368"	"13"	"0.0003571"	"0.001531"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLFGPPGTGK"	"[KR].gILLFGPPGTGk.[TS]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q6GX84; Q793F9"	"Fidgetin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fignl1 PE=2 SV=1; Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"808.00238"	"1614.99748"	"1614.99833"	"-0.53"	"-0.00043"	"10/88"	"10"	"88"	"2517737.15783691"	"HCD"	"MS2"	"0"	"161.4"	"100.000"	"63.1594"	"20190"	"20190"	"20169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.7"	""	"225.6"	""	"250.3"	""	"277.3"	""	"287.7"	"269.6"	""	"377"	"48"	"32.000"	"25.000"	"0.000332898129199342"	"17"	"0"	"8.786E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLFGPPGTGK"	"[KR].gILLFGPPGTGk.[TS]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q6GX84; Q793F9"	"Fidgetin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fignl1 PE=2 SV=1; Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"539.00421"	"1614.99808"	"1614.99833"	"-0.16"	"-0.00008"	"11/88"	"11"	"88"	"5791689.53936768"	"HCD"	"MS2"	"69.36802"	"144.6"	"100.000"	"63.3996"	"20341"	"20341"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.7"	""	"236.2"	""	"218.3"	""	"188.3"	"0.9"	"251.6"	"259.8"	""	"378"	"25"	"32.000"	"25.000"	"0.0581382297985994"	"14"	"0.0001889"	"0.0009408"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLFGPPGTGK"	"[KR].gILLFGPPGTGk.[TS]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q6GX84; Q793F9"	"Fidgetin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fignl1 PE=2 SV=1; Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"808.00269"	"1614.99809"	"1614.99833"	"-0.15"	"-0.00012"	"17/88"	"17"	"88"	"2828785.33770752"	"HCD"	"MS2"	"13.38689"	"168.3"	"100.000"	"63.2871"	"20295"	"20295"	"20275"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"236.2"	""	"239.3"	""	"251.8"	""	"282.9"	"3.3"	"294.0"	"285.7"	""	"378"	"55"	"32.000"	"25.000"	"5.68148421196736E-05"	""	"0"	"4.813E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLFGPPGTGK"	"[KR].gILLFGPPGTGk.[TS]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q6GX84; Q793F9"	"Fidgetin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fignl1 PE=2 SV=1; Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"539.00433"	"1614.99845"	"1614.99833"	"0.07"	"0.00004"	"10/88"	"10"	"88"	"5143475.08911133"	"HCD"	"MS2"	"20.3349"	"133.4"	"100.000"	"63.3090"	"20251"	"20251"	"20233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.4"	""	"210.1"	""	"203.8"	""	"190.2"	"0.9"	"229.0"	"228.0"	""	"416"	"35"	"33.000"	"26.000"	"0.00676181578561703"	"20"	"0.0001889"	"0.0007321"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLFGPPGTGK"	"[KR].gILLFGPPGTGk.[TS]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q6GX84; Q793F9"	"Fidgetin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fignl1 PE=2 SV=1; Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.00311"	"1614.99895"	"1614.99833"	"0.38"	"0.00031"	"10/88"	"10"	"88"	"4140585.85778809"	"HCD"	"MS2"	"73.43222"	"247.8"	"100.000"	"63.2815"	"20240"	"20240"	"20217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"414.1"	""	"383.8"	""	"416.8"	""	"274.8"	""	"437.5"	"419.4"	""	"416"	"8"	"33.000"	"26.000"	"3.3501429211708"	"13"	"0.0003571"	"0.001491"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVTLLNELK"	"[R].qVVTLLNELk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P07871"	"3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"P21775; P07871"	"3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1a PE=1 SV=2; 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"808.01178"	"1615.01628"	"1615.01946"	"-1.97"	"-0.00159"	"15/98"	"15"	"98"	"551571.881530762"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"67.4921"	"21953"	"21953"	"21929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.9"	""	"54.9"	""	"64.4"	""	"101.3"	""	"104.5"	"100.1"	""	"305"	"59"	"31.000"	"24.000"	"1.92428699025077E-05"	""	"0"	"5.91E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVTLLNELK"	"[R].qVVTLLNELk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P07871"	"3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"P21775; P07871"	"3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1a PE=1 SV=2; 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"0"	"2"	"2"	"0.9180"	"0.0000"	"1"	"1"	"1"	"808.01178"	"1615.01628"	"1615.01946"	"-1.97"	"-0.00159"	"9/98"	"9"	"98"	"616820.140441895"	"HCD"	"MS2"	"0"	"51.8"	"100.000"	"67.2936"	"21923"	"21923"	"21906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.9"	""	"54.9"	""	"60.0"	""	"98.9"	"0.8"	"98.1"	"103.2"	""	"305"	"61"	"31.000"	"24.000"	"1.17292392143708E-05"	"22"	"0"	"1.95E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGNVVSPVK"	"[K].kGNVVSPVk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"539.02124"	"1615.04917"	"1615.05099"	"-1.13"	"-0.00061"	"5/80"	"5"	"80"	"20909293.9344482"	"HCD"	"MS2"	"10.23353"	"472.0"	"52.291"	"30.2983"	"6813"	"6813"	"6794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"646.0"	""	"581.7"	""	"645.3"	""	"892.0"	"0.6"	"797.5"	"906.8"	""	"187"	"16"	"29.000"	"22.000"	"0.210286605645646"	"14"	"0.0001859"	"0.0003436"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGNVVSPVK"	"[K].kGNVVSPVk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"1"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"539.02148"	"1615.04990"	"1615.05099"	"-0.67"	"-0.00036"	"11/80"	"11"	"80"	"19824776.9137878"	"HCD"	"MS2"	"35.69363"	"877.9"	"100.000"	"30.3122"	"6860"	"6860"	"6838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1256.8"	""	"1131.2"	""	"1184.6"	""	"1720.9"	"4.1"	"1461.3"	"1550.5"	""	"187"	"19"	"29.000"	"22.000"	"0.12906592874037"	"18"	"0"	"9.031E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYLQALPYFDR"	"[K].tYLQALPYFDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y2"	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs2 PE=1 SV=1"	"Q641Y2"	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.43774"	"1615.86821"	"1615.86816"	"0.03"	"0.00003"	"6/112"	"6"	"112"	"1148958.89019775"	"HCD"	"MS2"	"29.193"	"79.0"	"100.000"	"63.7757"	"20495"	"20495"	"20467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.2"	""	"100.3"	""	"109.6"	""	"149.1"	"0.2"	"140.5"	"152.9"	""	"977"	"17"	"36.000"	"29.000"	"1.05648799884065"	"14"	"0.0002277"	"0.001133"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYLQALPYFDR"	"[K].tYLQALPYFDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y2"	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs2 PE=1 SV=1"	"Q641Y2"	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs2 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"808.43890"	"1615.87053"	"1615.86816"	"1.47"	"0.00119"	"6/112"	"6"	"112"	"1005727.73248291"	"HCD"	"MS2"	"0"	"68.6"	"100.000"	"63.7913"	"20448"	"20448"	"20425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.6"	""	"67.8"	""	"82.3"	""	"141.9"	"2.0"	"124.5"	"151.1"	""	"958"	"24"	"36.000"	"29.000"	"0.183795770590802"	"16"	"0.0001308"	"0.0002251"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPDMFPIK"	"[K].yFPDMFPIk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97943"	"Scavenger receptor class B member 1 OS=Rattus norvegicus OX=10116 GN=Scarb1 PE=1 SV=1"	"P97943"	"Scavenger receptor class B member 1 OS=Rattus norvegicus OX=10116 GN=Scarb1 PE=1 SV=1"	"0"	"3"	"3"	"0.3889"	"0.0000"	"1"	"1"	"1"	"539.30286"	"1615.89402"	"1615.89584"	"-1.13"	"-0.00061"	"6/64"	"6"	"64"	"1423388.17041016"	"HCD"	"MS2"	"7.308119"	"43.1"	"100.000"	"73.2053"	"24284"	"24284"	"24257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.8"	""	"56.7"	""	"52.6"	""	"64.4"	"0.9"	"96.2"	"90.5"	""	"974"	"18"	"36.000"	"29.000"	"0.752538912055208"	"25"	"0.000494"	"0.002644"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPDMFPIK"	"[K].yFPDMFPIk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97943"	"Scavenger receptor class B member 1 OS=Rattus norvegicus OX=10116 GN=Scarb1 PE=1 SV=1"	"P97943"	"Scavenger receptor class B member 1 OS=Rattus norvegicus OX=10116 GN=Scarb1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"808.45074"	"1615.89421"	"1615.89584"	"-1.01"	"-0.00082"	"6/64"	"6"	"64"	"583777.230102539"	"HCD"	"MS2"	"37.20731"	"46.8"	"100.000"	"73.1155"	"24299"	"24299"	"24271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.3"	""	"64.4"	""	"59.0"	""	"68.3"	""	"99.9"	"97.7"	""	"977"	"24"	"36.000"	"29.000"	"0.173725899120949"	"16"	"0.0005564"	"0.003569"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPDMFPIK"	"[K].yFPDMFPIk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97943"	"Scavenger receptor class B member 1 OS=Rattus norvegicus OX=10116 GN=Scarb1 PE=1 SV=1"	"P97943"	"Scavenger receptor class B member 1 OS=Rattus norvegicus OX=10116 GN=Scarb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"808.45117"	"1615.89507"	"1615.89584"	"-0.48"	"-0.00039"	"12/64"	"12"	"64"	"638882.853881836"	"HCD"	"MS2"	"30.93588"	"53.8"	"100.000"	"73.1637"	"24267"	"24267"	"24241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.9"	""	"69.4"	""	"71.6"	""	"69.9"	"2.7"	"128.1"	"107.8"	""	"975"	"26"	"36.000"	"29.000"	"0.132731688768798"	"17"	"0.0005564"	"0.003589"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPDMFPIK"	"[K].yFPDMFPIk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97943"	"Scavenger receptor class B member 1 OS=Rattus norvegicus OX=10116 GN=Scarb1 PE=1 SV=1"	"P97943"	"Scavenger receptor class B member 1 OS=Rattus norvegicus OX=10116 GN=Scarb1 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"539.30347"	"1615.89585"	"1615.89584"	"0.00"	"0.00000"	"6/64"	"6"	"64"	"1392804.92126465"	"HCD"	"MS2"	"16.20393"	"42.8"	"100.000"	"73.1479"	"24312"	"24312"	"24287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.0"	""	"55.9"	""	"60.1"	""	"64.7"	""	"92.3"	"90.8"	""	"987"	"15"	"36.000"	"29.000"	"1.57502393149223"	"19"	"0.004506"	"0.1308"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEIIQDLAAMVR"	"[R].qEIIQDLAAMVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"808.45593"	"1615.90459"	"1615.90389"	"0.43"	"0.00035"	"6/118"	"6"	"118"	"166935.950744629"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"77.2711"	"25983"	"25983"	"25957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.3"	""	"23.2"	""	"19.2"	""	"23.2"	""	"34.3"	"21.6"	""	"990"	"34"	"36.000"	"29.000"	"0.0220092477397209"	""	"0.0004557"	"0.002593"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEIIQDLAAMVR"	"[R].qEIIQDLAAMVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"808.45605"	"1615.90483"	"1615.90389"	"0.58"	"0.00047"	"5/118"	"5"	"118"	"158578.566589355"	"HCD"	"MS2"	"34.97821"	"15.3"	"100.000"	"77.3368"	"25959"	"25959"	"25929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.6"	""	"22.9"	""	"18.0"	""	"30.3"	""	"33.4"	"22.8"	""	"988"	"23"	"36.000"	"29.000"	"0.261051954376939"	"25"	"0.0006737"	"0.006627"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEAIVDAALSALR"	"[R].tGEAIVDAALSALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.7049"	"0.0000"	"1"	"1"	"1"	"539.31140"	"1615.91965"	"1615.92165"	"-1.24"	"-0.00067"	"15/124"	"15"	"124"	"4364309.32849121"	"HCD"	"MS2"	"3.74712"	"16.2"	"100.000"	"79.9002"	"27056"	"27056"	"27039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.5"	""	"18.2"	""	"25.4"	""	"29.5"	""	"25.2"	"35.2"	""	"919"	"61"	"36.000"	"29.000"	"4.08587913655728E-05"	""	"0"	"1.396E-06"	"1.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEAIVDAALSALR"	"[R].tGEAIVDAALSALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.7077"	"0.0000"	"1"	"1"	"1"	"539.31158"	"1615.92020"	"1615.92165"	"-0.90"	"-0.00048"	"9/124"	"9"	"124"	"4422898.93670654"	"HCD"	"MS2"	"9.911221"	"17.9"	"100.000"	"79.6422"	"26899"	"26899"	"26881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.9"	""	"21.8"	""	"25.8"	""	"34.7"	""	"32.1"	"34.6"	""	"913"	"65"	"36.000"	"29.000"	"1.54326597728031E-05"	""	"0"	"2.12E-06"	"1.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEAIVDAALSALR"	"[R].tGEAIVDAALSALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"808.46375"	"1615.92021"	"1615.92165"	"-0.89"	"-0.00072"	"12/124"	"12"	"124"	"775151.321044922"	"HCD"	"MS2"	"12.81701"	"34.3"	"100.000"	"80.0248"	"27106"	"27106"	"27087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.2"	""	"41.5"	""	"47.8"	""	"61.9"	"1.9"	"59.7"	"65.5"	""	"913"	"55"	"36.000"	"29.000"	"0.000149087345386671"	"29"	"0"	"1.975E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEAIVDAALSALR"	"[R].tGEAIVDAALSALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"808.46399"	"1615.92070"	"1615.92165"	"-0.59"	"-0.00047"	"13/124"	"13"	"124"	"3741461.9520874"	"HCD"	"MS2"	"8.413704"	"154.1"	"100.000"	"79.7084"	"26977"	"26977"	"26959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.1"	""	"188.1"	""	"212.8"	""	"282.8"	"3.2"	"263.9"	"297.8"	""	"912"	"74"	"36.000"	"29.000"	"1.76183341536656E-06"	""	"0"	"4.122E-07"	"1.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEAIVDAALSALR"	"[R].tGEAIVDAALSALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"539.31177"	"1615.92075"	"1615.92165"	"-0.56"	"-0.00030"	"15/124"	"15"	"124"	"3606190.22198486"	"HCD"	"MS2"	"15.0683"	"15.6"	"100.000"	"79.5978"	"26932"	"26932"	"26911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.2"	""	"16.6"	""	"25.2"	""	"26.1"	""	"29.6"	"29.9"	""	"912"	"60"	"36.000"	"29.000"	"4.42552545063943E-05"	""	"0"	"7.598E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEAIVDAALSALR"	"[R].tGEAIVDAALSALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.6949"	"0.0000"	"1"	"1"	"1"	"539.31183"	"1615.92093"	"1615.92165"	"-0.44"	"-0.00024"	"15/124"	"15"	"124"	"3808634.12121582"	"HCD"	"MS2"	"1.916785"	"15.1"	"100.000"	"79.9516"	"27026"	"27026"	"27009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.4"	""	"17.6"	""	"17.4"	""	"26.7"	""	"31.3"	"33.7"	""	"945"	"59"	"36.000"	"29.000"	"6.61305009915562E-05"	""	"0"	"2.804E-06"	"1.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEAIVDAALSALR"	"[R].tGEAIVDAALSALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"808.46429"	"1615.92131"	"1615.92165"	"-0.21"	"-0.00017"	"11/124"	"11"	"124"	"3822783.0758667"	"HCD"	"MS2"	"8.105029"	"160.0"	"100.000"	"79.7205"	"26931"	"26931"	"26913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"225.0"	""	"191.2"	""	"216.4"	""	"285.0"	"0.9"	"288.4"	"309.9"	""	"944"	"68"	"36.000"	"29.000"	"6.68254664139743E-06"	""	"0"	"2.489E-06"	"1.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEAIVDAALSALR"	"[R].tGEAIVDAALSALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"539.31207"	"1615.92167"	"1615.92165"	"0.01"	"0.00000"	"8/124"	"8"	"124"	"263894.729003906"	"HCD"	"MS2"	"18.4537"	"6.7"	"100.000"	"80.2817"	"27160"	"27160"	"27137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"5.0"	""	"9.2"	""	"13.7"	""	"10.7"	"15.5"	""	"930"	"32"	"36.000"	"29.000"	"0.0310065147684334"	"28"	"0.0001889"	"0.0004116"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEAIVDAALSALR"	"[R].tGEAIVDAALSALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"808.46454"	"1615.92180"	"1615.92165"	"0.09"	"0.00007"	"11/124"	"11"	"124"	"831658.763366699"	"HCD"	"MS2"	"6.382007"	"41.8"	"100.000"	"80.0370"	"27060"	"27060"	"27041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.8"	""	"47.3"	""	"59.8"	""	"80.1"	"0.3"	"70.5"	"79.0"	""	"930"	"48"	"36.000"	"29.000"	"0.000678348631028037"	"29"	"0"	"1.919E-06"	"1.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEQLLTTIAR"	"[R].vGWEQLLTTIAR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"539.31641"	"1615.93467"	"1615.93691"	"-1.39"	"-0.00075"	"12/112"	"12"	"112"	"4145976.14984131"	"HCD"	"MS2"	"26.054"	"43.2"	"100.000"	"81.6637"	"27775"	"27775"	"27758"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.2"	""	"56.6"	""	"53.9"	""	"78.3"	""	"75.1"	"84.1"	""	"821"	"48"	"36.000"	"29.000"	"0.000594720845880124"	""	"0"	"8.82E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQFVEHWK"	"[R].lAQFVEHWk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"539.31671"	"1615.93558"	"1615.93607"	"-0.30"	"-0.00016"	"9/76"	"9"	"76"	"14854557.8395996"	"HCD"	"MS2"	"4.963788"	"403.0"	"91.401"	"55.9109"	"17287"	"17287"	"17269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"481.4"	""	"587.7"	""	"575.9"	""	"543.9"	""	"700.1"	"933.9"	""	"829"	"39"	"36.000"	"29.000"	"0.00501792926356675"	"21"	"0"	"2.826E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQFVEHWK"	"[R].lAQFVEHWk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"539.31677"	"1615.93576"	"1615.93607"	"-0.19"	"-0.00010"	"8/76"	"8"	"76"	"3447397.84442139"	"HCD"	"MS2"	"8.477894"	"139.3"	"100.000"	"56.0341"	"17284"	"17284"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.7"	""	"185.5"	""	"180.0"	""	"278.2"	"2.5"	"230.2"	"264.3"	""	"829"	"18"	"36.000"	"29.000"	"0.720318443516616"	"16"	"0.0001889"	"0.0004515"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEQLLTTIAR"	"[R].vGWEQLLTTIAR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7759"	"0.0000"	"1"	"1"	"1"	"808.47156"	"1615.93584"	"1615.93691"	"-0.66"	"-0.00053"	"11/112"	"11"	"112"	"1664265.94403076"	"HCD"	"MS2"	"4.099013"	"84.1"	"100.000"	"81.5527"	"27729"	"27729"	"27710"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.4"	""	"106.7"	""	"94.2"	""	"135.9"	"1.5"	"163.4"	"179.2"	""	"829"	"58"	"36.000"	"29.000"	"7.30339071237621E-05"	"29"	"0"	"7.441E-06"	"1.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEQLLTTIAR"	"[R].vGWEQLLTTIAR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"539.31689"	"1615.93613"	"1615.93691"	"-0.48"	"-0.00026"	"8/112"	"8"	"112"	"1173904.36975098"	"HCD"	"MS2"	"14.58811"	"14.4"	"100.000"	"81.9845"	"27905"	"27905"	"27886"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.6"	""	"24.1"	""	"19.4"	""	"25.2"	""	"22.8"	"30.2"	""	"840"	"35"	"36.000"	"29.000"	"0.0121688430683455"	""	"0"	"8.334E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEQLLTTIAR"	"[R].vGWEQLLTTIAR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.3654"	"0.0000"	"1"	"1"	"1"	"539.31696"	"1615.93631"	"1615.93691"	"-0.37"	"-0.00020"	"14/112"	"14"	"112"	"3968207.74060059"	"HCD"	"MS2"	"24.93445"	"42.8"	"100.000"	"81.6478"	"27717"	"27717"	"27696"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.1"	""	"59.9"	""	"58.4"	""	"65.4"	""	"78.3"	"82.2"	""	"819"	"52"	"36.000"	"29.000"	"0.000282653199672579"	""	"0"	"6.517E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEQLLTTIAR"	"[R].vGWEQLLTTIAR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.5660"	"0.0000"	"1"	"1"	"1"	"808.47186"	"1615.93645"	"1615.93691"	"-0.28"	"-0.00023"	"11/112"	"11"	"112"	"1208706.79302979"	"HCD"	"MS2"	"0"	"61.3"	"100.000"	"81.5301"	"27669"	"27669"	"27648"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.0"	""	"80.6"	""	"71.2"	""	"104.9"	""	"116.8"	"123.3"	""	"819"	"53"	"36.000"	"29.000"	"0.000193755440544726"	""	"0"	"8.112E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQFVEHWK"	"[R].lAQFVEHWk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"539.31702"	"1615.93650"	"1615.93607"	"0.26"	"0.00014"	"12/76"	"12"	"76"	"14534830.2774658"	"HCD"	"MS2"	"5.034081"	"409.4"	"100.000"	"55.7046"	"17149"	"17149"	"17131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"492.9"	""	"586.7"	""	"569.5"	""	"545.8"	""	"724.9"	"969.7"	""	"819"	"31"	"36.000"	"29.000"	"0.0358305855955635"	"17"	"0"	"2.236E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEQLLTTIAR"	"[R].vGWEQLLTTIAR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"808.47198"	"1615.93669"	"1615.93691"	"-0.13"	"-0.00011"	"8/112"	"8"	"112"	"353113.047973633"	"HCD"	"MS2"	"11.66877"	"23.2"	"100.000"	"82.1854"	"27987"	"27987"	"27966"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.3"	""	"27.6"	""	"30.8"	""	"37.5"	""	"35.6"	"55.5"	""	"819"	"50"	"36.000"	"29.000"	"0.000378663902227702"	"27"	"0"	"1.75E-05"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEQLLTTIAR"	"[R].vGWEQLLTTIAR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.5902"	"0.0000"	"1"	"1"	"1"	"808.47205"	"1615.93682"	"1615.93691"	"-0.06"	"-0.00005"	"11/112"	"11"	"112"	"5169596.66070557"	"HCD"	"MS2"	"0"	"223.1"	"100.000"	"81.8599"	"27855"	"27855"	"27838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.8"	""	"297.4"	""	"274.2"	""	"342.6"	"3.4"	"417.5"	"499.2"	""	"819"	"61"	"36.000"	"29.000"	"3.3593395740306E-05"	""	"0"	"1.026E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEQLLTTIAR"	"[R].vGWEQLLTTIAR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.4048"	"0.0000"	"1"	"1"	"1"	"539.31714"	"1615.93686"	"1615.93691"	"-0.03"	"-0.00001"	"11/112"	"11"	"112"	"1238259.80181885"	"HCD"	"MS2"	"11.08151"	"15.9"	"100.000"	"81.9570"	"27843"	"27843"	"27824"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.2"	""	"24.8"	""	"21.4"	""	"20.9"	""	"28.2"	"33.6"	""	"818"	"42"	"36.000"	"29.000"	"0.00257468028788594"	""	"0"	"4.29E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEQLLTTIAR"	"[R].vGWEQLLTTIAR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7193"	"0.0000"	"1"	"1"	"1"	"808.47223"	"1615.93718"	"1615.93691"	"0.17"	"0.00014"	"11/112"	"11"	"112"	"5988784.94372559"	"HCD"	"MS2"	"0"	"263.0"	"100.000"	"81.8325"	"27793"	"27793"	"27776"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.0"	""	"341.7"	""	"305.9"	""	"400.6"	"5.2"	"521.6"	"571.2"	""	"839"	"57"	"36.000"	"29.000"	"7.77556516022514E-05"	""	"0"	"5.762E-06"	"1.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWEQLLTTIAR"	"[R].vGWEQLLTTIAR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"808.47253"	"1615.93779"	"1615.93691"	"0.55"	"0.00044"	"13/112"	"13"	"112"	"430314.17590332"	"HCD"	"MS2"	"8.227944"	"28.6"	"100.000"	"82.1533"	"27923"	"27923"	"27904"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.1"	""	"36.8"	""	"34.1"	""	"41.1"	"2.1"	"60.0"	"59.6"	""	"834"	"42"	"36.000"	"29.000"	"0.00276144282043635"	"29"	"0"	"6.142E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSFPGGSLLLAGR"	"[R].vLSFPGGSLLLAGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"808.48761"	"1615.96794"	"1615.97329"	"-3.31"	"-0.00267"	"7/114"	"7"	"114"	"332574.056213379"	"HCD"	"MS2"	"30.96681"	"20.2"	"100.000"	"74.8843"	"25021"	"25021"	"24991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.4"	""	"26.3"	""	"34.1"	""	"30.2"	""	"37.0"	"34.7"	""	"616"	"50"	"34.000"	"27.000"	"0.000288769098133171"	"27"	"0.0001889"	"0.0004463"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQAAELGGLLK"	"[K].tGQAAELGGLLk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"808.49231"	"1615.97734"	"1615.97833"	"-0.61"	"-0.00049"	"10/116"	"10"	"116"	"1777281.11328125"	"HCD"	"MS2"	"0"	"157.0"	"100.000"	"49.4778"	"14634"	"14634"	"14607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.8"	""	"192.6"	""	"241.5"	""	"248.1"	""	"298.5"	"286.4"	""	"582"	"72"	"34.000"	"27.000"	"1.97193678714706E-06"	""	"0"	"2.373E-06"	"1.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQAAELGGLLK"	"[K].tGQAAELGGLLk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"808.49304"	"1615.97881"	"1615.97833"	"0.30"	"0.00024"	"10/116"	"10"	"116"	"1316045.71954346"	"HCD"	"MS2"	"0"	"118.8"	"100.000"	"49.7690"	"14796"	"14796"	"14766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.7"	""	"146.5"	""	"167.6"	""	"196.9"	""	"215.7"	"235.4"	""	"575"	"74"	"34.000"	"27.000"	"1.1820554481755E-06"	"27"	"0"	"3.926E-06"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGILYLGGQLVVR"	"[K].vGILYLGGQLVVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"539.33868"	"1616.00150"	"1616.00968"	"-5.06"	"-0.00273"	"4/106"	"4"	"106"	"1971969.71966553"	"HCD"	"MS2"	"100"	"93.7"	"100.000"	"48.1557"	"14093"	"14093"	"14064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.4"	""	"118.7"	""	"123.1"	""	"154.8"	"0.1"	"178.1"	"180.0"	""	"468"	"9"	"33.000"	"26.000"	"2.7177897563864"	"14"	"0.002981"	"0.0547"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPPLALFTSK"	"[R].aLPPLALFTSk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"539.34393"	"1616.01725"	"1616.01874"	"-0.92"	"-0.00050"	"10/82"	"10"	"82"	"707234.841918945"	"HCD"	"MS2"	"20.0679"	"25.3"	"100.000"	"74.5267"	"24875"	"24875"	"24847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.5"	""	"33.3"	""	"36.3"	""	"39.8"	"0.7"	"44.2"	"47.6"	""	"374"	"31"	"32.000"	"25.000"	"0.0165898174251099"	"14"	"0.0001889"	"0.0004688"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPPLALFTSK"	"[R].aLPPLALFTSk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"808.51270"	"1616.01811"	"1616.01874"	"-0.38"	"-0.00031"	"9/82"	"9"	"82"	"339392.022888184"	"HCD"	"MS2"	"11.2222"	"21.4"	"100.000"	"74.5153"	"24870"	"24870"	"24847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.1"	""	"28.0"	""	"30.4"	""	"32.6"	""	"40.1"	"40.4"	""	"376"	"70"	"32.000"	"25.000"	"1.79125678836447E-06"	"21"	"0.0001859"	"0.0003378"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPPLALFTSK"	"[R].aLPPLALFTSk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"539.34448"	"1616.01889"	"1616.01874"	"0.10"	"0.00005"	"12/82"	"12"	"82"	"931384.403076172"	"HCD"	"MS2"	"17.87285"	"30.0"	"100.000"	"74.4672"	"24799"	"24799"	"24769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.9"	""	"35.1"	""	"45.8"	""	"44.4"	"0.7"	"57.0"	"56.1"	""	"396"	"35"	"32.000"	"25.000"	"0.00571038237619068"	"15"	"0.0001859"	"0.0003707"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPPLALFTSK"	"[R].aLPPLALFTSk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.51373"	"1616.02019"	"1616.01874"	"0.90"	"0.00073"	"9/82"	"9"	"82"	"419096.894104004"	"HCD"	"MS2"	"6.706667"	"27.1"	"100.000"	"74.4837"	"24805"	"24805"	"24785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.8"	""	"35.4"	""	"33.8"	""	"48.7"	""	"48.6"	"54.2"	""	"389"	"59"	"32.000"	"25.000"	"2.60567115704344E-05"	"16"	"7.476E-05"	"0.0001891"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFEAYLPQK"	"[R].yFEAYLPQk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35820"	"2'-deoxynucleoside 5'-phosphate N-hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Dnph1 PE=1 SV=1"	"O35820"	"2'-deoxynucleoside 5'-phosphate N-hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Dnph1 PE=1 SV=1"	"0"	"3"	"3"	"0.4783"	"0.0000"	"1"	"1"	"1"	"539.64105"	"1616.90860"	"1616.90885"	"-0.15"	"-0.00008"	"7/66"	"7"	"66"	"4001080.24841309"	"HCD"	"MS2"	"21.59569"	"119.3"	"100.000"	"57.4220"	"17905"	"17905"	"17877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.1"	""	"171.4"	""	"181.7"	""	"161.1"	""	"205.0"	"207.3"	""	"969"	"23"	"36.000"	"29.000"	"0.257213513229914"	"26"	"0.0004166"	"0.00232"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFEAYLPQK"	"[R].yFEAYLPQk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35820"	"2'-deoxynucleoside 5'-phosphate N-hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Dnph1 PE=1 SV=1"	"O35820"	"2'-deoxynucleoside 5'-phosphate N-hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Dnph1 PE=1 SV=1"	"0"	"3"	"3"	"0.4074"	"0.0000"	"1"	"1"	"1"	"539.64124"	"1616.90915"	"1616.90885"	"0.19"	"0.00010"	"7/66"	"7"	"66"	"3884680.18701172"	"HCD"	"MS2"	"19.46603"	"125.0"	"100.000"	"57.2069"	"17763"	"17763"	"17739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.8"	""	"183.1"	""	"184.3"	""	"182.9"	"2.4"	"222.7"	"224.3"	""	"972"	"27"	"36.000"	"29.000"	"0.0926053908930139"	""	"0.0003839"	"0.001655"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFEAYLPQK"	"[R].yFEAYLPQk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35820"	"2'-deoxynucleoside 5'-phosphate N-hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Dnph1 PE=1 SV=1"	"O35820"	"2'-deoxynucleoside 5'-phosphate N-hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Dnph1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.95831"	"1616.90935"	"1616.90885"	"0.31"	"0.00025"	"11/66"	"11"	"66"	"952091.182312012"	"HCD"	"MS2"	"100"	"86.6"	"100.000"	"57.4681"	"17924"	"17924"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.7"	""	"120.6"	""	"132.9"	""	"125.1"	"2.7"	"147.1"	"150.5"	""	"972"	"17"	"36.000"	"29.000"	"0.965242129835683"	"14"	"0.0001889"	"0.0008946"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEINTLLEAK"	"[K].qEINTLLEAk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"539.65643"	"1616.95475"	"1616.96234"	"-4.70"	"-0.00253"	"7/102"	"7"	"102"	"1516547.97253418"	"HCD"	"MS2"	"58.6585"	"86.6"	"100.000"	"23.9020"	"4285"	"4285"	"4261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.1"	""	"117.0"	""	"130.8"	""	"133.9"	"2.9"	"167.9"	"147.4"	""	"755"	"1"	"35.000"	"28.000"	"33.2595949560526"	"13"	"0.001879"	"0.02671"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEINTLLEAK"	"[K].qEINTLLEAk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"3"	"539.65668"	"1616.95548"	"1616.96234"	"-4.25"	"-0.00229"	"6/102"	"6"	"102"	"2121911.4854126"	"HCD"	"MS2"	"19.93929"	"107.0"	"100.000"	"23.8869"	"4245"	"4245"	"4227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.4"	""	"147.1"	""	"161.3"	""	"165.1"	""	"192.0"	"204.8"	""	"762"	"8"	"35.000"	"28.000"	"6.23627094663995"	"15"	"0.002456"	"0.03618"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLIWEILK"	"[K].eDLIWEILk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"808.98578"	"1616.96428"	"1616.96637"	"-1.29"	"-0.00104"	"6/74"	"6"	"74"	"348908.165588379"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"87.1334"	"29995"	"29995"	"29977"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.8"	""	"27.5"	""	"33.2"	""	"53.9"	""	"58.3"	"61.5"	""	"692"	"37"	"35.000"	"28.000"	"0.00663859384271921"	"21"	"0.0001308"	"0.0002888"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLIWEILK"	"[K].eDLIWEILk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"539.65997"	"1616.96537"	"1616.96637"	"-0.62"	"-0.00033"	"11/74"	"11"	"74"	"471505.530212402"	"HCD"	"MS2"	"9.503541"	"12.8"	"100.000"	"87.5113"	"30147"	"30147"	"30139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.5"	""	"12.8"	""	"17.2"	""	"21.1"	""	"26.9"	"31.9"	""	"655"	"27"	"35.000"	"28.000"	"0.059321388033292"	"24"	"0.0001889"	"0.0004102"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLIWEILK"	"[K].eDLIWEILk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"539.66010"	"1616.96573"	"1616.96637"	"-0.39"	"-0.00021"	"11/74"	"11"	"74"	"1448243.85528564"	"HCD"	"MS2"	"29.53831"	"38.2"	"100.000"	"87.2346"	"30036"	"30036"	"30018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.6"	""	"36.8"	""	"37.7"	""	"68.3"	""	"85.0"	"92.4"	""	"667"	"32"	"35.000"	"28.000"	"0.0225473672293226"	"25"	"0"	"0.0001489"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLIWEILK"	"[K].eDLIWEILk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"539.66016"	"1616.96592"	"1616.96637"	"-0.28"	"-0.00015"	"9/74"	"9"	"74"	"1758920.13085938"	"HCD"	"MS2"	"18.29598"	"45.1"	"100.000"	"87.1530"	"29952"	"29952"	"29943"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.0"	""	"50.4"	""	"54.2"	""	"87.1"	""	"101.2"	"96.7"	""	"666"	"34"	"35.000"	"28.000"	"0.0131960585407061"	"27"	"0"	"0.0001379"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLIWEILK"	"[K].eDLIWEILk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7091"	"0.0000"	"1"	"1"	"1"	"808.98676"	"1616.96623"	"1616.96637"	"-0.08"	"-0.00007"	"7/74"	"7"	"74"	"1465328.10430908"	"HCD"	"MS2"	"0"	"109.4"	"100.000"	"87.4328"	"30117"	"30117"	"30103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.6"	""	"100.8"	""	"117.2"	""	"213.0"	"0.8"	"259.9"	"253.0"	""	"666"	"55"	"35.000"	"28.000"	"0.000108753748113388"	""	"0"	"6.861E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLIWEILK"	"[K].eDLIWEILk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"539.66034"	"1616.96646"	"1616.96637"	"0.06"	"0.00003"	"9/74"	"9"	"74"	"460705.696166992"	"HCD"	"MS2"	"7.71839"	"12.6"	"100.000"	"87.4388"	"30067"	"30067"	"30055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.8"	""	"11.4"	""	"14.3"	""	"22.9"	"1.3"	"24.0"	"30.3"	""	"700"	"27"	"35.000"	"28.000"	"0.0778158461727991"	"23"	"0.0001889"	"0.0003903"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLIWEILK"	"[K].eDLIWEILk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7091"	"0.0000"	"1"	"1"	"1"	"808.98688"	"1616.96648"	"1616.96637"	"0.07"	"0.00006"	"7/74"	"7"	"74"	"1763624.3447876"	"HCD"	"MS2"	"0"	"138.9"	"100.000"	"87.3441"	"30030"	"30030"	"30013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.0"	""	"128.3"	""	"153.0"	""	"251.5"	"3.5"	"312.6"	"343.6"	""	"700"	"55"	"35.000"	"28.000"	"0.000113780554084902"	""	"0"	"6.181E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLIWEILK"	"[K].eDLIWEILk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"808.98694"	"1616.96660"	"1616.96637"	"0.15"	"0.00012"	"14/74"	"14"	"74"	"381309.203918457"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"87.0536"	"29912"	"29912"	"29884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.8"	""	"31.6"	""	"36.5"	""	"63.8"	"0.2"	"71.2"	"72.3"	""	"700"	"48"	"35.000"	"28.000"	"0.000503579502389546"	"27"	"0"	"7.165E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLIWEILK"	"[K].eDLIWEILk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"808.98718"	"1616.96709"	"1616.96637"	"0.45"	"0.00036"	"11/74"	"11"	"74"	"138179.734619141"	"HCD"	"MS2"	"5.412465"	"11.3"	"100.000"	"87.6158"	"30134"	"30134"	"30128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.2"	""	"12.8"	""	"7.3"	""	"23.2"	""	"26.7"	"29.6"	""	"695"	"34"	"35.000"	"28.000"	"0.0153799459396013"	"24"	"0.0001889"	"0.0005497"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEMTEILK"	"[K].vVPEMTEILk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"808.98718"	"1616.96709"	"1616.96974"	"-1.64"	"-0.00132"	"7/78"	"7"	"78"	"713395.334594727"	"HCD"	"MS2"	"0"	"56.5"	"100.000"	"63.6091"	"20374"	"20374"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.9"	""	"76.2"	""	"76.7"	""	"78.3"	""	"108.4"	"111.8"	""	"695"	"30"	"35.000"	"28.000"	"0.0353960507348805"	"18"	"0.0004166"	"0.002196"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLIWEILK"	"[K].eDLIWEILk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"808.98724"	"1616.96721"	"1616.96637"	"0.52"	"0.00042"	"10/74"	"10"	"74"	"198032.292907715"	"HCD"	"MS2"	"9.957657"	"9.6"	"100.000"	"87.6973"	"30216"	"30216"	"30209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.8"	""	"6.8"	""	"9.1"	""	"18.3"	""	"22.5"	"24.5"	""	"695"	"28"	"35.000"	"28.000"	"0.0515175034588218"	"21"	"0.0001889"	"0.0006115"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEMTEILK"	"[K].vVPEMTEILk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"808.98767"	"1616.96807"	"1616.96974"	"-1.03"	"-0.00084"	"8/78"	"8"	"78"	"845646.628356934"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"63.6512"	"20444"	"20444"	"20419"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.9"	""	"87.7"	""	"98.0"	""	"79.9"	""	"118.5"	"133.9"	""	"697"	"40"	"35.000"	"28.000"	"0.00358263679897076"	"20"	"0.0001889"	"0.0007411"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEMTEILK"	"[K].vVPEMTEILk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.6750"	"0.0000"	"1"	"1"	"1"	"539.66150"	"1616.96994"	"1616.96974"	"0.13"	"0.00007"	"7/78"	"7"	"78"	"4195917.64898682"	"HCD"	"MS2"	"39.38703"	"111.1"	"100.000"	"63.3991"	"20288"	"20288"	"20265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.7"	""	"160.3"	""	"186.1"	""	"134.5"	""	"181.4"	"193.3"	""	"652"	"40"	"35.000"	"28.000"	"0.00315658581141167"	"28"	"0"	"7.382E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEMTEILK"	"[K].vVPEMTEILk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.6579"	"0.0000"	"1"	"1"	"1"	"539.66150"	"1616.96994"	"1616.96974"	"0.13"	"0.00007"	"11/78"	"11"	"78"	"4287008.34338379"	"HCD"	"MS2"	"32.73074"	"112.2"	"100.000"	"63.4875"	"20377"	"20377"	"20355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.5"	""	"166.1"	""	"191.9"	""	"122.6"	""	"198.5"	"195.3"	""	"652"	"38"	"35.000"	"28.000"	"0.00523862848482198"	"28"	"0"	"0.0001018"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVILYGPPGTGK"	"[K].gVILYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"539.66351"	"1616.97599"	"1616.97760"	"-1.00"	"-0.00054"	"10/88"	"10"	"88"	"3970404.44976807"	"HCD"	"MS2"	"11.59884"	"120.6"	"100.000"	"48.0067"	"14032"	"14032"	"14006"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.9"	""	"168.7"	""	"182.5"	""	"184.2"	""	"213.4"	"217.5"	""	"597"	"38"	"34.000"	"27.000"	"0.0052112791264677"	"25"	"0"	"9.222E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLLYGPPGTGK"	"[K].gVLLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"539.66351"	"1616.97599"	"1616.97760"	"-1.00"	"-0.00054"	"10/88"	"10"	"88"	"3970404.44976807"	"HCD"	"MS2"	"11.59884"	"120.6"	"100.000"	"48.0067"	"14032"	"14032"	"14006"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.9"	""	"168.7"	""	"182.5"	""	"184.2"	""	"213.4"	"217.5"	""	"597"	"38"	"34.000"	"27.000"	"0.0052112791264677"	"25"	"0"	"9.222E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVILYGPPGTGK"	"[K].gVILYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"808.99188"	"1616.97649"	"1616.97760"	"-0.69"	"-0.00056"	"11/88"	"11"	"88"	"1544415.39312744"	"HCD"	"MS2"	"0"	"96.6"	"100.000"	"48.0685"	"14057"	"14057"	"14037"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.2"	""	"142.4"	""	"146.4"	""	"138.3"	"0.7"	"169.6"	"176.1"	""	"597"	"76"	"34.000"	"27.000"	"7.39510484203536E-07"	""	"0"	"2.418E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLLYGPPGTGK"	"[K].gVLLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"808.99188"	"1616.97649"	"1616.97760"	"-0.69"	"-0.00056"	"11/88"	"11"	"88"	"1544415.39312744"	"HCD"	"MS2"	"0"	"96.6"	"100.000"	"48.0685"	"14057"	"14057"	"14037"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.2"	""	"142.4"	""	"146.4"	""	"138.3"	"0.7"	"169.6"	"176.1"	""	"597"	"76"	"34.000"	"27.000"	"7.39510484203536E-07"	""	"0"	"2.418E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVILYGPPGTGK"	"[K].gVILYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"808.99213"	"1616.97698"	"1616.97760"	"-0.39"	"-0.00031"	"10/88"	"10"	"88"	"2561091.21466064"	"HCD"	"MS2"	"0"	"161.2"	"100.000"	"46.2111"	"13297"	"13297"	"13272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"216.3"	""	"248.0"	""	"244.7"	""	"236.7"	"0.8"	"302.9"	"277.3"	""	"596"	"51"	"34.000"	"27.000"	"0.000219895460578472"	"22"	"7.476E-05"	"0.0002012"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLLYGPPGTGK"	"[K].gVLLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"808.99213"	"1616.97698"	"1616.97760"	"-0.39"	"-0.00031"	"10/88"	"10"	"88"	"2561091.21466064"	"HCD"	"MS2"	"0"	"161.2"	"100.000"	"46.2111"	"13297"	"13297"	"13272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"216.3"	""	"248.0"	""	"244.7"	""	"236.7"	"0.8"	"302.9"	"277.3"	""	"596"	"51"	"34.000"	"27.000"	"0.000219895460578472"	"22"	"7.476E-05"	"0.0002012"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVILYGPPGTGK"	"[K].gVILYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"808.99255"	"1616.97783"	"1616.97760"	"0.14"	"0.00012"	"11/88"	"11"	"88"	"2179141.43566895"	"HCD"	"MS2"	"0"	"129.9"	"100.000"	"48.1258"	"14129"	"14129"	"14098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.6"	""	"178.3"	""	"195.2"	""	"201.2"	"0.5"	"239.1"	"233.7"	""	"634"	"68"	"35.000"	"28.000"	"5.50882862713553E-06"	""	"0"	"2.021E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLLYGPPGTGK"	"[K].gVLLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"808.99255"	"1616.97783"	"1616.97760"	"0.14"	"0.00012"	"11/88"	"11"	"88"	"2179141.43566895"	"HCD"	"MS2"	"0"	"129.9"	"100.000"	"48.1258"	"14129"	"14129"	"14098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.6"	""	"178.3"	""	"195.2"	""	"201.2"	"0.5"	"239.1"	"233.7"	""	"634"	"68"	"35.000"	"28.000"	"5.50882862713553E-06"	""	"0"	"2.021E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVILYGPPGTGK"	"[K].gVILYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"808.99268"	"1616.97807"	"1616.97760"	"0.29"	"0.00024"	"10/88"	"10"	"88"	"2496840.33905029"	"HCD"	"MS2"	"0"	"151.3"	"100.000"	"46.5072"	"13466"	"13466"	"13443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.0"	""	"223.2"	""	"218.9"	""	"211.6"	""	"277.1"	"272.6"	""	"634"	"45"	"35.000"	"28.000"	"0.00108407483276846"	"21"	"0.0001308"	"0.0002231"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLLYGPPGTGK"	"[K].gVLLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"808.99268"	"1616.97807"	"1616.97760"	"0.29"	"0.00024"	"10/88"	"10"	"88"	"2496840.33905029"	"HCD"	"MS2"	"0"	"151.3"	"100.000"	"46.5072"	"13466"	"13466"	"13443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.0"	""	"223.2"	""	"218.9"	""	"211.6"	""	"277.1"	"272.6"	""	"634"	"45"	"35.000"	"28.000"	"0.00108407483276846"	"21"	"0.0001308"	"0.0002231"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVILYGPPGTGK"	"[K].gVILYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"808.99286"	"1616.97844"	"1616.97760"	"0.52"	"0.00042"	"10/88"	"10"	"88"	"1918647.57000732"	"HCD"	"MS2"	"0"	"121.6"	"100.000"	"47.7797"	"13939"	"13939"	"13912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.3"	""	"173.1"	""	"188.5"	""	"193.3"	"0.5"	"235.8"	"204.7"	""	"632"	"50"	"34.000"	"28.000"	"0.000315273220167927"	"23"	"0"	"0.0001038"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLLYGPPGTGK"	"[K].gVLLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"808.99286"	"1616.97844"	"1616.97760"	"0.52"	"0.00042"	"10/88"	"10"	"88"	"1918647.57000732"	"HCD"	"MS2"	"0"	"121.6"	"100.000"	"47.7797"	"13939"	"13939"	"13912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.3"	""	"173.1"	""	"188.5"	""	"193.3"	"0.5"	"235.8"	"204.7"	""	"632"	"50"	"34.000"	"28.000"	"0.000315273220167927"	"23"	"0"	"0.0001038"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVILYGPPGTGK"	"[K].gVILYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"808.99310"	"1616.97893"	"1616.97760"	"0.82"	"0.00067"	"10/88"	"10"	"88"	"1012167.52648926"	"HCD"	"MS2"	"0"	"70.6"	"100.000"	"48.4214"	"14249"	"14249"	"14226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.9"	""	"89.0"	""	"105.3"	""	"99.1"	"0.2"	"135.7"	"120.2"	""	"630"	"65"	"34.000"	"27.000"	"9.75687079253221E-06"	""	"0"	"3.782E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLLYGPPGTGK"	"[K].gVLLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"808.99310"	"1616.97893"	"1616.97760"	"0.82"	"0.00067"	"10/88"	"10"	"88"	"1012167.52648926"	"HCD"	"MS2"	"0"	"70.6"	"100.000"	"48.4214"	"14249"	"14249"	"14226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.9"	""	"89.0"	""	"105.3"	""	"99.1"	"0.2"	"135.7"	"120.2"	""	"630"	"65"	"34.000"	"27.000"	"9.75687079253221E-06"	""	"0"	"3.782E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDTVAGIALIK"	"[K].gTDTVAGIALIk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"809.00153"	"1616.99578"	"1616.99873"	"-1.83"	"-0.00148"	"10/92"	"10"	"92"	"918924.042907715"	"HCD"	"MS2"	"0"	"80.0"	"100.000"	"55.2255"	"17007"	"17007"	"16981"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.2"	""	"100.9"	""	"99.8"	""	"137.3"	"1.1"	"147.4"	"151.1"	""	"457"	"77"	"33.000"	"26.000"	"5.04529081494819E-07"	"24"	"0"	"3.884E-06"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSQLLSIEK"	"[K].lQSQLLSIEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"809.00232"	"1616.99736"	"1616.99873"	"-0.85"	"-0.00068"	"9/100"	"9"	"100"	"2501683.31262207"	"HCD"	"MS2"	"0"	"194.3"	"100.000"	"56.1013"	"17311"	"17311"	"17291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"292.3"	""	"232.2"	""	"252.0"	""	"338.9"	"1.1"	"355.3"	"369.3"	""	"446"	"60"	"33.000"	"26.000"	"2.1994032529576E-05"	""	"0"	"2.17E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSQLLSLEK"	"[K].lQSQLLSLEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"809.00232"	"1616.99736"	"1616.99873"	"-0.85"	"-0.00068"	"9/100"	"9"	"100"	"2501683.31262207"	"HCD"	"MS2"	"0"	"194.3"	"100.000"	"56.1013"	"17311"	"17311"	"17291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"292.3"	""	"232.2"	""	"252.0"	""	"338.9"	"1.1"	"355.3"	"369.3"	""	"446"	"60"	"33.000"	"26.000"	"2.1994032529576E-05"	""	"0"	"2.17E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSQLLSIEK"	"[K].lQSQLLSIEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"539.67072"	"1616.99759"	"1616.99873"	"-0.70"	"-0.00038"	"10/100"	"10"	"100"	"7138327.12017822"	"HCD"	"MS2"	"39.12833"	"254.3"	"100.000"	"56.3228"	"17456"	"17456"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"336.9"	""	"332.9"	""	"333.7"	""	"570.8"	"1.2"	"410.4"	"420.3"	""	"446"	"24"	"33.000"	"26.000"	"0.0865575316159145"	"21"	"7.476E-05"	"0.0001975"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSQLLSLEK"	"[K].lQSQLLSLEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"539.67072"	"1616.99759"	"1616.99873"	"-0.70"	"-0.00038"	"10/100"	"10"	"100"	"7138327.12017822"	"HCD"	"MS2"	"39.12833"	"254.3"	"100.000"	"56.3228"	"17456"	"17456"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"336.9"	""	"332.9"	""	"333.7"	""	"570.8"	"1.2"	"410.4"	"420.3"	""	"446"	"24"	"33.000"	"26.000"	"0.0865575316159145"	"21"	"7.476E-05"	"0.0001975"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSQLLSIEK"	"[K].lQSQLLSIEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"809.00262"	"1616.99797"	"1616.99873"	"-0.47"	"-0.00038"	"9/100"	"9"	"100"	"2840727.01727295"	"HCD"	"MS2"	"0"	"214.8"	"100.000"	"56.3113"	"17451"	"17451"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.2"	""	"283.4"	""	"310.6"	""	"342.9"	""	"405.9"	"397.2"	""	"470"	"64"	"33.000"	"26.000"	"8.75120509698235E-06"	""	"0"	"3.438E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSQLLSLEK"	"[K].lQSQLLSLEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"809.00262"	"1616.99797"	"1616.99873"	"-0.47"	"-0.00038"	"9/100"	"9"	"100"	"2840727.01727295"	"HCD"	"MS2"	"0"	"214.8"	"100.000"	"56.3113"	"17451"	"17451"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.2"	""	"283.4"	""	"310.6"	""	"342.9"	""	"405.9"	"397.2"	""	"470"	"64"	"33.000"	"26.000"	"8.75120509698235E-06"	""	"0"	"3.438E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDTVAGIALIK"	"[K].gTDTVAGIALIk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.8706"	"0.0000"	"1"	"1"	"1"	"809.00287"	"1616.99846"	"1616.99873"	"-0.17"	"-0.00013"	"10/92"	"10"	"92"	"1312845.98480225"	"HCD"	"MS2"	"17.02934"	"111.7"	"100.000"	"54.9369"	"16835"	"16835"	"16812"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.7"	""	"153.7"	""	"168.5"	""	"169.2"	""	"203.5"	"221.1"	""	"470"	"85"	"33.000"	"26.000"	"8.20479741374679E-08"	""	"0"	"4.274E-06"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSQLLSIEK"	"[K].lQSQLLSIEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"P21575"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"539.67108"	"1616.99869"	"1616.99873"	"-0.02"	"-0.00001"	"10/100"	"10"	"100"	"7387455.97467041"	"HCD"	"MS2"	"16.24534"	"209.9"	"100.000"	"56.1841"	"17345"	"17345"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"283.5"	""	"266.3"	""	"292.6"	""	"411.1"	""	"374.0"	"363.7"	""	"469"	"38"	"33.000"	"26.000"	"0.0036571506191292"	"24"	"0"	"0.0001118"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSQLLSLEK"	"[K].lQSQLLSLEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"539.67108"	"1616.99869"	"1616.99873"	"-0.02"	"-0.00001"	"10/100"	"10"	"100"	"7387455.97467041"	"HCD"	"MS2"	"16.24534"	"209.9"	"100.000"	"56.1841"	"17345"	"17345"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"283.5"	""	"266.3"	""	"292.6"	""	"411.1"	""	"374.0"	"363.7"	""	"469"	"38"	"33.000"	"26.000"	"0.0036571506191292"	"24"	"0"	"0.0001118"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYPFDFQGAK"	"[K].sYPFDFQGAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"809.43536"	"1617.86345"	"1617.86771"	"-2.64"	"-0.00213"	"13/86"	"13"	"86"	"1811323.29150391"	"HCD"	"MS2"	"0"	"140.7"	"100.000"	"50.7294"	"15186"	"15186"	"15162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.9"	""	"167.9"	""	"193.7"	""	"226.2"	""	"291.3"	"294.8"	""	"1014"	"5"	"37.000"	"30.000"	"16.8270489979173"	"13"	"0.00109"	"0.01482"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYPFDFQGAK"	"[K].sYPFDFQGAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"809.43628"	"1617.86528"	"1617.86771"	"-1.50"	"-0.00122"	"9/86"	"9"	"86"	"1420866.11181641"	"HCD"	"MS2"	"0"	"131.2"	"100.000"	"50.4202"	"15060"	"15060"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.0"	""	"141.5"	""	"123.8"	""	"251.7"	""	"292.9"	"320.0"	""	"1028"	"41"	"37.000"	"30.000"	"0.0041016926925574"	"23"	"0"	"4.004E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYPFDFQGAK"	"[K].sYPFDFQGAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"809.43671"	"1617.86614"	"1617.86771"	"-0.98"	"-0.00079"	"8/86"	"8"	"86"	"1281406.20220947"	"HCD"	"MS2"	"0"	"119.1"	"100.000"	"50.1784"	"14912"	"14912"	"14899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.0"	""	"118.6"	""	"111.0"	""	"236.1"	"4.0"	"272.3"	"288.1"	""	"1018"	"50"	"37.000"	"30.000"	"0.000456791256400881"	"20"	"0"	"2.388E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYPFDFQGAK"	"[K].sYPFDFQGAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"809.43671"	"1617.86614"	"1617.86771"	"-0.98"	"-0.00079"	"9/86"	"9"	"86"	"2081972.66796875"	"HCD"	"MS2"	"24.06584"	"172.0"	"100.000"	"50.4787"	"15033"	"15033"	"15015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.2"	""	"195.3"	""	"187.8"	""	"299.5"	""	"358.0"	"392.2"	""	"1018"	"23"	"37.000"	"30.000"	"0.234810645451233"	"15"	"0"	"9.283E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].imLPWDPSGk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"539.97388"	"1617.90708"	"1617.90747"	"-0.24"	"-0.00013"	"8/76"	"8"	"76"	"4202072.53656006"	"HCD"	"MS2"	"12.44858"	"114.0"	"100.000"	"64.0499"	"20607"	"20607"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.9"	""	"115.8"	""	"140.8"	""	"301.3"	"1.2"	"200.9"	"213.4"	""	"1072"	"24"	"37.000"	"30.000"	"0.197317129872397"	"24"	"0.0001889"	"0.0005909"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].imLPWDPSGk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"539.97418"	"1617.90799"	"1617.90747"	"0.32"	"0.00017"	"8/76"	"8"	"76"	"960955.142578125"	"HCD"	"MS2"	"26.22917"	"40.7"	"100.000"	"65.0216"	"20951"	"20951"	"20921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.8"	""	"59.7"	""	"60.1"	""	"51.1"	""	"83.1"	"81.6"	""	"1079"	"24"	"37.000"	"30.000"	"0.199063414428596"	"16"	"0.0006037"	"0.005615"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].imLPWDPSGk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"539.97491"	"1617.91019"	"1617.90747"	"1.68"	"0.00091"	"9/76"	"9"	"76"	"3961600.45361328"	"HCD"	"MS2"	"27.87238"	"105.6"	"100.000"	"63.9962"	"20532"	"20532"	"20505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.1"	""	"105.8"	""	"119.1"	""	"297.9"	""	"184.2"	"179.0"	""	"1039"	"31"	"37.000"	"30.000"	"0.0431107473723743"	"21"	"0.0001889"	"0.000474"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLPWDPSGK"	"[K].imLPWDPSGk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"809.45996"	"1617.91265"	"1617.90747"	"3.20"	"0.00259"	"9/76"	"9"	"76"	"2188754.59210205"	"HCD"	"MS2"	"29.25125"	"141.4"	"100.000"	"64.0239"	"20543"	"20543"	"20521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.8"	""	"136.0"	""	"155.7"	""	"399.6"	""	"262.8"	"253.0"	""	"1030"	"33"	"37.000"	"30.000"	"0.0264123612755553"	"24"	"0.0006037"	"0.004422"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVNPANVTFK"	"[K].gLVNPANVTFk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"809.48816"	"1617.96904"	"1617.97285"	"-2.35"	"-0.00190"	"15/94"	"15"	"94"	"2503803.04626465"	"HCD"	"MS2"	"30.85612"	"179.5"	"100.000"	"50.7961"	"15213"	"15213"	"15190"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"263.0"	""	"256.5"	""	"255.2"	""	"263.3"	""	"332.4"	"333.8"	""	"719"	"30"	"35.000"	"28.000"	"0.0335504921136518"	"15"	"0"	"9.618E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVNPANVTFK"	"[K].gLVNPANVTFk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"809.48883"	"1617.97038"	"1617.97285"	"-1.52"	"-0.00123"	"9/94"	"9"	"94"	"2883310.37005615"	"HCD"	"MS2"	"16.93126"	"193.6"	"100.000"	"50.5980"	"15082"	"15082"	"15058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"284.6"	""	"281.2"	""	"268.3"	""	"300.4"	"4.1"	"342.0"	"352.2"	""	"689"	"63"	"35.000"	"28.000"	"1.82469056420676E-05"	"16"	"0"	"1.705E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVNPANVTFK"	"[K].gLVNPANVTFk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"539.99542"	"1617.97171"	"1617.97285"	"-0.70"	"-0.00038"	"11/94"	"11"	"94"	"7029305.99658203"	"HCD"	"MS2"	"15.87711"	"239.6"	"100.000"	"50.9867"	"15291"	"15291"	"15270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"325.8"	""	"327.6"	""	"362.6"	""	"392.3"	""	"407.3"	"457.6"	""	"679"	"30"	"35.000"	"28.000"	"0.0350622497255994"	"18"	"0.0001308"	"0.0002134"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYPFDFQGAK"	"[K].sYPFDFqGAk.[I]"	"N-Term(TMT6plex); Q7(Deamidated); K10(TMT6plex)"	"1"	"1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"809.93854"	"1618.86980"	"1618.85173"	"11.16"	"0.00903"	"9/86"	"9"	"86"	"941149.083862305"	"HCD"	"MS2"	"0"	"93.9"	"100.000"	"50.1349"	"14895"	"14895"	"14880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.1"	""	"96.9"	""	"97.6"	""	"187.4"	""	"209.8"	"225.0"	""	"1052"	"32"	"37.000"	"30.000"	"0.0300597762889402"	"15"	"0.0006037"	"0.004656"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIYYITGESK"	"[K].sIYYITGESk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"809.95654"	"1618.90581"	"1618.90924"	"-2.12"	"-0.00172"	"9/88"	"9"	"88"	"1234474.47235107"	"HCD"	"MS2"	"0"	"104.4"	"100.000"	"44.4770"	"12643"	"12643"	"12620"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.7"	""	"159.1"	""	"149.5"	""	"170.5"	""	"168.7"	"183.2"	""	"1038"	"62"	"37.000"	"30.000"	"2.95234671107954E-05"	"19"	"0"	"1.537E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIYYITGESK"	"[K].sIYYITGESk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"540.30719"	"1618.90702"	"1618.90924"	"-1.38"	"-0.00074"	"9/88"	"9"	"88"	"3284745.1182251"	"HCD"	"MS2"	"57.18271"	"128.1"	"100.000"	"44.5503"	"12673"	"12673"	"12652"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.3"	""	"141.1"	""	"159.6"	""	"274.5"	"0.6"	"240.5"	"246.6"	""	"1024"	"14"	"37.000"	"30.000"	"2.21957569734415"	"19"	"0.0008731"	"0.008784"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIYYITGESK"	"[K].sIYYITGESk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"809.95728"	"1618.90727"	"1618.90924"	"-1.22"	"-0.00099"	"9/88"	"9"	"88"	"5508489.7409668"	"HCD"	"MS2"	"0"	"422.9"	"100.000"	"44.1807"	"12522"	"12522"	"12492"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"748.2"	""	"561.6"	""	"636.7"	""	"650.6"	"1.7"	"690.1"	"709.0"	""	"1024"	"63"	"37.000"	"30.000"	"2.71187683272529E-05"	"22"	"0"	"6.471E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIYYITGESK"	"[K].sIYYITGESk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.30750"	"1618.90793"	"1618.90924"	"-0.81"	"-0.00044"	"9/88"	"9"	"88"	"3118625.76257324"	"HCD"	"MS2"	"25.40737"	"118.7"	"100.000"	"44.2796"	"12513"	"12513"	"12486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.0"	""	"140.4"	""	"163.0"	""	"246.4"	""	"203.9"	"217.3"	""	"1017"	"5"	"37.000"	"30.000"	"15.3211356329864"	"13"	"0.002265"	"0.03311"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIYYITGESK"	"[K].sIYYITGESk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.30750"	"1618.90793"	"1618.90924"	"-0.81"	"-0.00044"	"11/88"	"11"	"88"	"16450792.1316528"	"HCD"	"MS2"	"3.371229"	"454.6"	"99.765"	"43.9604"	"12382"	"12382"	"12358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"757.6"	""	"634.6"	""	"675.4"	""	"698.9"	""	"729.3"	"806.7"	""	"1017"	"43"	"37.000"	"30.000"	"0.00241707962391917"	"15"	"0.0001859"	"0.0003227"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSISTDYSLK"	"[K].fSISTDYSLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"540.30756"	"1618.90812"	"1618.90924"	"-0.70"	"-0.00038"	"8/84"	"8"	"84"	"14798643.986145"	"HCD"	"MS2"	"14.13402"	"396.1"	"95.291"	"55.7245"	"17211"	"17211"	"17189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"595.4"	""	"709.0"	""	"627.4"	""	"565.9"	"2.2"	"612.0"	"630.6"	""	"1017"	"43"	"37.000"	"30.000"	"0.00257804775157687"	"23"	"0.0001308"	"0.00026"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIYYITGESK"	"[K].sIYYITGESk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"809.95782"	"1618.90837"	"1618.90924"	"-0.54"	"-0.00044"	"12/88"	"12"	"88"	"968659.446350098"	"HCD"	"MS2"	"0"	"88.8"	"100.000"	"44.2476"	"12500"	"12500"	"12470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"138.3"	""	"126.9"	""	"126.7"	""	"130.8"	""	"156.4"	"161.8"	""	"1013"	"36"	"37.000"	"30.000"	"0.0130791478655642"	"16"	"0.0001308"	"0.0002572"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSISTDYSLK"	"[K].fSISTDYSLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"0.8714"	"0.0000"	"1"	"1"	"1"	"809.95789"	"1618.90849"	"1618.90924"	"-0.46"	"-0.00038"	"18/84"	"18"	"84"	"2380098.62322998"	"HCD"	"MS2"	"0"	"211.6"	"100.000"	"55.9846"	"17318"	"17318"	"17301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"302.8"	""	"357.0"	""	"355.4"	""	"283.9"	""	"319.3"	"386.2"	""	"1015"	"70"	"37.000"	"30.000"	"4.85775991182134E-06"	"26"	"0"	"1.77E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIYYITGESK"	"[K].sIYYITGESk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9180"	"0.0000"	"1"	"1"	"1"	"809.95789"	"1618.90849"	"1618.90924"	"-0.46"	"-0.00038"	"9/88"	"9"	"88"	"6525295.1496582"	"HCD"	"MS2"	"0"	"486.7"	"100.000"	"43.9352"	"12372"	"12372"	"12342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"866.1"	""	"680.0"	""	"731.5"	""	"748.5"	"4.4"	"753.6"	"814.6"	""	"1015"	"61"	"37.000"	"30.000"	"4.09671777851285E-05"	"21"	"0"	"6.8E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSISTDYSLK"	"[K].fSISTDYSLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"809.95801"	"1618.90874"	"1618.90924"	"-0.31"	"-0.00025"	"9/84"	"9"	"84"	"7022350.0647583"	"HCD"	"MS2"	"0"	"593.1"	"100.000"	"55.6782"	"17192"	"17192"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"924.4"	""	"1103.1"	""	"931.0"	""	"814.4"	"1.8"	"880.7"	"946.9"	""	"1014"	"62"	"37.000"	"30.000"	"3.19895373651458E-05"	"22"	"0"	"8.358E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSISTDYSLK"	"[K].fSISTDYSLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"540.30798"	"1618.90940"	"1618.90924"	"0.09"	"0.00005"	"8/84"	"8"	"84"	"13172590.0797729"	"HCD"	"MS2"	"29.31423"	"364.5"	"100.000"	"55.5252"	"17076"	"17076"	"17051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"551.5"	""	"632.1"	""	"566.6"	""	"489.4"	"4.0"	"593.9"	"609.1"	""	"1071"	"40"	"37.000"	"30.000"	"0.0054545568830298"	"22"	"0"	"0.0001297"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIYYITGESK"	"[K].sIYYITGESk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"540.30804"	"1618.90958"	"1618.90924"	"0.21"	"0.00011"	"11/88"	"11"	"88"	"14950177.6399536"	"HCD"	"MS2"	"12.81667"	"396.4"	"100.000"	"44.2105"	"12534"	"12534"	"12508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"645.3"	""	"536.3"	""	"603.7"	""	"607.4"	"5.6"	"665.4"	"685.4"	""	"1067"	"41"	"37.000"	"30.000"	"0.00419888928802335"	"18"	"0"	"0.0001594"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSISTDYSLK"	"[K].fSISTDYSLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"809.95844"	"1618.90959"	"1618.90924"	"0.22"	"0.00017"	"16/84"	"16"	"84"	"7478841.73815918"	"HCD"	"MS2"	"0"	"651.1"	"100.000"	"55.4906"	"17062"	"17062"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"998.7"	""	"1190.8"	""	"1004.9"	""	"928.0"	""	"989.6"	"1040.1"	""	"1067"	"56"	"37.000"	"30.000"	"0.00012827275538037"	"22"	"0"	"6.424E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSISTDYSLK"	"[K].fSISTDYSLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"809.95886"	"1618.91045"	"1618.90924"	"0.74"	"0.00060"	"9/84"	"9"	"84"	"2726676.91339111"	"HCD"	"MS2"	"0"	"247.5"	"100.000"	"55.7784"	"17180"	"17180"	"17163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"347.1"	""	"409.4"	""	"399.6"	""	"363.4"	""	"396.2"	"427.7"	""	"1065"	"64"	"37.000"	"30.000"	"2.02450853540699E-05"	"22"	"0"	"2.693E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LLPMTVVTMASAR"	"[R].lLPMTVVTMASAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYF1"	"Target of rapamycin complex 2 subunit MAPKAP1 OS=Rattus norvegicus OX=10116 GN=Mapkap1 PE=2 SV=1"	"Q6AYF1"	"Target of rapamycin complex 2 subunit MAPKAP1 OS=Rattus norvegicus OX=10116 GN=Mapkap1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"809.96411"	"1618.92095"	"1618.92219"	"-0.77"	"-0.00062"	"6/108"	"6"	"108"	"335051.145690918"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"68.6034"	"22457"	"22457"	"22426"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.4"	""	"26.6"	""	"32.2"	""	"33.0"	"0.8"	"45.4"	"42.8"	""	"995"	"9"	"36.000"	"29.000"	"6.36492198818369"	"15"	"0.003286"	"0.07408"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQVEYAFK"	"[R].lYQVEYAFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"809.96509"	"1618.92290"	"1618.92450"	"-0.99"	"-0.00080"	"8/76"	"8"	"76"	"1067592.925354"	"HCD"	"MS2"	"4.246841"	"95.4"	"100.000"	"59.4593"	"18732"	"18732"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.1"	""	"119.2"	""	"144.7"	""	"147.1"	"3.8"	"178.8"	"176.0"	""	"968"	"49"	"36.000"	"29.000"	"0.000672737073507263"	""	"0"	"4.136E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQVEYAFK"	"[R].lYQVEYAFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"540.31256"	"1618.92313"	"1618.92450"	"-0.85"	"-0.00046"	"9/76"	"9"	"76"	"1015903.90899658"	"HCD"	"MS2"	"32.17036"	"43.3"	"100.000"	"59.4203"	"18663"	"18663"	"18633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.7"	""	"60.9"	""	"61.1"	""	"67.1"	"4.6"	"84.7"	"81.0"	""	"968"	"25"	"36.000"	"29.000"	"0.154470432186877"	"16"	"0.0001889"	"0.0008569"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYFENLLSK"	"[K].fYFENLLSk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"3"	"3"	"0.1765"	"0.0000"	"1"	"1"	"1"	"540.31262"	"1618.92331"	"1618.92450"	"-0.73"	"-0.00040"	"6/80"	"6"	"80"	"757742.179077148"	"HCD"	"MS2"	"6.471886"	"29.4"	"100.000"	"75.2472"	"25117"	"25117"	"25089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.5"	""	"28.6"	""	"45.3"	""	"50.7"	""	"62.2"	"63.9"	""	"968"	"17"	"36.000"	"29.000"	"1.03715905094211"	"28"	"0.0001889"	"0.001078"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQVEYAFK"	"[R].lYQVEYAFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"540.31268"	"1618.92350"	"1618.92450"	"-0.62"	"-0.00034"	"10/76"	"10"	"76"	"5599635.96405029"	"HCD"	"MS2"	"36.25699"	"170.8"	"100.000"	"59.0171"	"18499"	"18499"	"18473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"248.5"	""	"244.1"	""	"289.8"	""	"251.5"	"1.9"	"295.6"	"284.7"	""	"954"	"30"	"36.000"	"29.000"	"0.0532743769191328"	"25"	"0.0001308"	"0.0002926"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQVEYAFK"	"[R].lYQVEYAFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"809.96545"	"1618.92363"	"1618.92450"	"-0.54"	"-0.00043"	"7/76"	"7"	"76"	"4044498.09765625"	"HCD"	"MS2"	"7.206505"	"330.6"	"100.000"	"59.1389"	"18601"	"18601"	"18581"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"472.6"	""	"482.9"	""	"506.9"	""	"514.9"	""	"569.3"	"589.5"	""	"949"	"31"	"36.000"	"29.000"	"0.0375177008985917"	"21"	"7.476E-05"	"0.0001975"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQVEYAFK"	"[R].lYQVEYAFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"809.96552"	"1618.92375"	"1618.92450"	"-0.46"	"-0.00037"	"8/76"	"8"	"76"	"1025690.84155273"	"HCD"	"MS2"	"0"	"95.2"	"100.000"	"59.3194"	"18621"	"18621"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.7"	""	"133.7"	""	"137.9"	""	"160.8"	""	"167.7"	"168.8"	""	"937"	"48"	"36.000"	"29.000"	"0.000749392936405972"	"26"	"0"	"5.559E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYFENLLSK"	"[K].fYFENLLSk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"2"	"2"	"0.6200"	"0.0000"	"1"	"1"	"1"	"809.96588"	"1618.92449"	"1618.92450"	"-0.01"	"-0.00001"	"7/80"	"7"	"80"	"944985.552429199"	"HCD"	"MS2"	"4.1724"	"90.5"	"100.000"	"75.1822"	"25142"	"25142"	"25119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.2"	""	"104.6"	""	"133.1"	""	"155.4"	""	"175.9"	"190.2"	""	"941"	"50"	"36.000"	"29.000"	"0.000496089034752087"	""	"0"	"9.874E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQVEYAFK"	"[R].lYQVEYAFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"809.96588"	"1618.92449"	"1618.92450"	"-0.01"	"-0.00001"	"16/76"	"16"	"76"	"4198778.9911499"	"HCD"	"MS2"	"8.538545"	"336.5"	"100.000"	"59.0036"	"18493"	"18493"	"18473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"497.7"	""	"524.6"	""	"494.4"	""	"514.1"	"0.9"	"550.4"	"601.2"	""	"941"	"51"	"36.000"	"29.000"	"0.000399539413504586"	""	"0"	"0.0001363"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYFENLLSK"	"[K].fYFENLLSk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"2"	"2"	"0.4717"	"0.0000"	"1"	"1"	"1"	"809.96600"	"1618.92473"	"1618.92450"	"0.14"	"0.00011"	"7/80"	"7"	"80"	"907437.924194336"	"HCD"	"MS2"	"17.62755"	"86.0"	"100.000"	"75.1709"	"25086"	"25086"	"25057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.3"	""	"94.9"	""	"113.2"	""	"160.5"	"0.6"	"172.7"	"170.7"	""	"926"	"53"	"36.000"	"29.000"	"0.000257383671116197"	""	"0"	"2.801E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQVEYAFK"	"[R].lYQVEYAFk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"3"	"3"	"0.5200"	"0.0000"	"1"	"1"	"1"	"540.31311"	"1618.92478"	"1618.92450"	"0.17"	"0.00009"	"9/76"	"9"	"76"	"5185208.31640625"	"HCD"	"MS2"	"32.48461"	"157.0"	"100.000"	"59.1547"	"18608"	"18608"	"18581"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.1"	""	"208.9"	""	"251.5"	""	"248.7"	""	"287.7"	"269.2"	""	"926"	"25"	"36.000"	"29.000"	"0.146076714062245"	"26"	"0.0001859"	"0.0003624"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLNFDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"540.32385"	"1618.95700"	"1618.95686"	"0.09"	"0.00005"	"10/100"	"10"	"100"	"9605802.6663208"	"HCD"	"MS2"	"4.464387"	"195.0"	"71.092"	"56.8462"	"17615"	"17615"	"17595"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"299.8"	""	"328.9"	""	"246.2"	""	"328.5"	""	"315.1"	"327.2"	""	"781"	"39"	"35.000"	"28.000"	"0.00491610373305623"	"22"	"0.0001308"	"0.000291"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLNFDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"540.32391"	"1618.95719"	"1618.95686"	"0.20"	"0.00011"	"11/100"	"11"	"100"	"33230845.7403564"	"HCD"	"MS2"	"4.26055"	"612.7"	"77.746"	"56.7353"	"17624"	"17624"	"17605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1093.9"	""	"1175.3"	""	"746.9"	""	"999.2"	""	"908.9"	"860.5"	""	"781"	"39"	"35.000"	"28.000"	"0.00461977727510677"	"17"	"0.0001308"	"0.0002096"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLNFDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"809.98224"	"1618.95720"	"1618.95686"	"0.21"	"0.00017"	"7/100"	"7"	"100"	"6392014.36846924"	"HCD"	"MS2"	"2.818813"	"333.8"	"73.841"	"56.8434"	"17614"	"17614"	"17595"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"560.2"	""	"629.4"	""	"388.1"	""	"539.1"	"8.7"	"504.1"	"524.3"	""	"781"	"54"	"35.000"	"28.000"	"0.000169676242538999"	"21"	"0"	"6.969E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLNFDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"540.32397"	"1618.95737"	"1618.95686"	"0.31"	"0.00017"	"10/100"	"10"	"100"	"10495496.5546875"	"HCD"	"MS2"	"7.317324"	"174.6"	"58.322"	"57.0463"	"17751"	"17751"	"17733"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.5"	""	"292.1"	""	"211.8"	""	"298.6"	"2.4"	"288.1"	"283.7"	""	"781"	"36"	"35.000"	"28.000"	"0.00976384863742456"	"17"	"0"	"0.0001743"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLNFDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"809.98242"	"1618.95757"	"1618.95686"	"0.43"	"0.00035"	"7/100"	"7"	"100"	"22027930.4790649"	"HCD"	"MS2"	"0"	"1217.4"	"90.527"	"56.7286"	"17622"	"17622"	"17605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2250.6"	""	"2354.3"	""	"1402.1"	""	"2045.8"	"9.6"	"1763.2"	"1663.5"	""	"781"	"54"	"35.000"	"28.000"	"0.000160924081207508"	"21"	"0"	"0.0001623"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLNFDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"809.98248"	"1618.95769"	"1618.95686"	"0.51"	"0.00041"	"8/100"	"8"	"100"	"7047973.94866943"	"HCD"	"MS2"	"2.382209"	"391.0"	"80.254"	"57.0418"	"17750"	"17750"	"17733"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"660.9"	""	"718.9"	""	"468.1"	""	"628.7"	"9.4"	"639.5"	"570.2"	""	"775"	"51"	"35.000"	"28.000"	"0.000281366058506122"	"21"	"0"	"8.115E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLNFDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"540.32422"	"1618.95810"	"1618.95686"	"0.77"	"0.00041"	"11/100"	"11"	"100"	"32999772.0311279"	"HCD"	"MS2"	"4.901521"	"458.9"	"59.035"	"56.5301"	"17486"	"17486"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"789.6"	""	"892.1"	""	"551.0"	""	"750.0"	""	"691.5"	"660.0"	""	"770"	"39"	"35.000"	"28.000"	"0.00455470998954188"	"17"	"0.0001308"	"0.000232"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLNFDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"809.98285"	"1618.95842"	"1618.95686"	"0.96"	"0.00078"	"7/100"	"7"	"100"	"19792738.7620239"	"HCD"	"MS2"	"0"	"1306.2"	"100.000"	"56.5233"	"17484"	"17484"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2370.7"	""	"2585.4"	""	"1532.4"	""	"2159.0"	"6.7"	"1911.8"	"1761.3"	""	"768"	"54"	"35.000"	"28.000"	"0.000163429790643357"	"21"	"0"	"0.0001576"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLNFDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"809.98303"	"1618.95879"	"1618.95686"	"1.19"	"0.00096"	"9/100"	"9"	"100"	"1237719.59320068"	"HCD"	"MS2"	"34.34016"	"108.0"	"100.000"	"57.1837"	"17754"	"17754"	"17723"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.8"	""	"161.1"	""	"152.6"	""	"174.6"	"1.8"	"184.7"	"175.1"	""	"766"	"36"	"35.000"	"28.000"	"0.0100971492077112"	"21"	"0"	"0.0001517"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLNFDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"809.98328"	"1618.95928"	"1618.95686"	"1.49"	"0.00121"	"7/100"	"7"	"100"	"1458234.65380859"	"HCD"	"MS2"	"0"	"118.6"	"100.000"	"57.3896"	"17892"	"17892"	"17861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.5"	""	"205.4"	""	"150.1"	""	"192.5"	"1.1"	"200.9"	"201.7"	""	"759"	"19"	"35.000"	"28.000"	"0.464741847621086"	"14"	"0.0001889"	"0.0009629"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHISAFPTLK"	"[R].fHISAFPTLk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"540.32855"	"1618.97110"	"1618.97212"	"-0.63"	"-0.00034"	"11/80"	"11"	"80"	"2399103.09533691"	"HCD"	"MS2"	"0"	"86.4"	"100.000"	"54.1692"	"16575"	"16575"	"16555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.3"	""	"114.1"	""	"123.7"	""	"136.4"	""	"151.6"	"194.6"	""	"671"	"28"	"35.000"	"28.000"	"0.0593871555515494"	"21"	"0.0001308"	"0.0002494"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHVSQVVHK"	"[K].nLHVSQVVHk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"405.50049"	"1618.98012"	"1618.97933"	"0.49"	"0.00020"	"10/90"	"10"	"90"	"18543052.8463135"	"HCD"	"MS2"	"42.09991"	"384.6"	"36.196"	"29.6562"	"6550"	"6550"	"6528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"485.3"	""	"519.9"	""	"520.8"	""	"607.6"	""	"755.8"	"769.9"	""	"674"	"16"	"35.000"	"28.000"	"0.896664345152199"	"13"	"0.0001308"	"0.0002494"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHVSQVVHK"	"[K].nLHVSQVVHk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"405.50119"	"1618.98293"	"1618.97933"	"2.22"	"0.00090"	"10/90"	"10"	"90"	"23175133.9553223"	"HCD"	"MS2"	"43.38604"	"511.0"	"41.779"	"29.6981"	"6608"	"6608"	"6589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"684.3"	""	"700.6"	""	"694.0"	""	"813.8"	""	"988.9"	"974.3"	""	"652"	"22"	"35.000"	"28.000"	"0.230790325709229"	"14"	"0.0001308"	"0.0002334"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEYGIFNQK"	"[R].yEYGIFNQk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"810.44641"	"1619.88555"	"1619.88336"	"1.35"	"0.00109"	"8/68"	"8"	"68"	"1057726.12255859"	"HCD"	"MS2"	"14.87013"	"104.6"	"100.000"	"47.6869"	"13949"	"13949"	"13922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.0"	""	"139.7"	""	"142.2"	""	"141.0"	"2.8"	"206.1"	"180.1"	""	"1076"	"46"	"37.000"	"30.000"	"0.00148519088664655"	"18"	"0"	"5.447E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEYGIFNQK"	"[R].yEYGIFNQk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"810.44702"	"1619.88677"	"1619.88336"	"2.10"	"0.00170"	"6/68"	"6"	"68"	"932402.741699219"	"HCD"	"MS2"	"14.11573"	"94.8"	"100.000"	"47.4694"	"13812"	"13812"	"13784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.6"	""	"123.1"	""	"129.6"	""	"140.5"	""	"179.3"	"181.4"	""	"1086"	"18"	"37.000"	"30.000"	"0.818087636939402"	"14"	"0.0003839"	"0.001842"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVNNLAEIYGR"	"[K].eLVNNLAEIYGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"810.45203"	"1619.89678"	"1619.89544"	"0.83"	"0.00067"	"7/118"	"7"	"118"	"1798558.88201904"	"HCD"	"MS2"	"11.2719"	"106.2"	"100.000"	"57.6930"	"17962"	"17962"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.1"	""	"149.1"	""	"145.2"	""	"155.6"	""	"190.8"	"204.4"	""	"1053"	"53"	"37.000"	"30.000"	"0.000261455857243602"	"23"	"0"	"1.562E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVNNLAEIYGR"	"[K].eLVNNLAEIYGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"810.45233"	"1619.89739"	"1619.89544"	"1.20"	"0.00097"	"7/118"	"7"	"118"	"1869595.19537354"	"HCD"	"MS2"	"31.13582"	"115.7"	"100.000"	"57.8504"	"18080"	"18080"	"18053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.9"	""	"169.2"	""	"143.2"	""	"171.2"	""	"195.4"	"230.4"	""	"1048"	"53"	"37.000"	"30.000"	"0.0002788247278558"	"23"	"0"	"1.539E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSLVDDEAFIR"	"[K].lLSLVDDEAFIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.8070"	"0.0000"	"1"	"1"	"1"	"540.64453"	"1619.91904"	"1619.92059"	"-0.96"	"-0.00052"	"14/98"	"14"	"98"	"921748.940795898"	"HCD"	"MS2"	"41.69303"	"15.1"	"100.000"	"78.4839"	"26427"	"26427"	"26401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.0"	""	"17.4"	""	"27.8"	""	"24.7"	""	"28.2"	"26.3"	""	"1003"	"57"	"37.000"	"30.000"	"0.000108210882119006"	"27"	"0"	"2.277E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSLVDDEAFIR"	"[K].lLSLVDDEAFIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.6744"	"0.0000"	"1"	"1"	"1"	"540.64453"	"1619.91904"	"1619.92059"	"-0.96"	"-0.00052"	"12/98"	"12"	"98"	"911425.489746094"	"HCD"	"MS2"	"42.91696"	"13.5"	"100.000"	"78.4348"	"26458"	"26458"	"26431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.0"	""	"15.6"	""	"14.7"	""	"25.3"	""	"27.5"	"26.0"	""	"1003"	"43"	"37.000"	"30.000"	"0.00237832355608013"	"29"	"0"	"4.306E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSLVDDEAFIR"	"[K].lLSLVDDEAFIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"810.46362"	"1619.91997"	"1619.92059"	"-0.38"	"-0.00031"	"9/98"	"9"	"98"	"1667362.15393066"	"HCD"	"MS2"	"13.48987"	"70.6"	"100.000"	"78.5317"	"26497"	"26497"	"26479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.1"	""	"89.3"	""	"96.0"	""	"119.5"	"2.1"	"146.3"	"121.2"	""	"999"	"65"	"36.000"	"29.000"	"1.77229287922171E-05"	"26"	"0"	"1.63E-06"	"1.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSLVDDEAFIR"	"[K].lLSLVDDEAFIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"810.46375"	"1619.92021"	"1619.92059"	"-0.23"	"-0.00019"	"9/98"	"9"	"98"	"1857595.78674316"	"HCD"	"MS2"	"11.61534"	"80.5"	"100.000"	"78.5787"	"26466"	"26466"	"26449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.4"	""	"98.1"	""	"112.4"	""	"127.0"	"0.7"	"165.8"	"154.1"	""	"997"	"62"	"36.000"	"29.000"	"3.27088415251999E-05"	"24"	"0"	"4.867E-06"	"1.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQTSSVLVSGLR"	"[K].mLQTSSVLVSGLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"810.47040"	"1619.93352"	"1619.93519"	"-1.03"	"-0.00084"	"12/128"	"12"	"128"	"5103825.70977783"	"HCD"	"MS2"	"0"	"295.9"	"100.000"	"56.6154"	"17575"	"17575"	"17557"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"451.7"	""	"536.9"	""	"416.8"	""	"386.3"	"0.8"	"499.1"	"507.9"	""	"910"	"51"	"36.000"	"29.000"	"0.000389055354362531"	"23"	"0"	"2.047E-06"	"1.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQTSSVLVSGLR"	"[K].mLQTSSVLVSGLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.9014"	"0.0000"	"1"	"1"	"1"	"540.64990"	"1619.93515"	"1619.93519"	"-0.02"	"-0.00001"	"15/128"	"15"	"128"	"7326483.03161621"	"HCD"	"MS2"	"24.84232"	"81.0"	"100.000"	"56.5924"	"17566"	"17566"	"17541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.6"	""	"125.1"	""	"116.8"	""	"112.1"	"0.6"	"152.1"	"140.5"	""	"918"	"71"	"36.000"	"29.000"	"3.49794265601663E-06"	"24"	"0"	"1.08E-05"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQTSSVLVSGLR"	"[K].mLQTSSVLVSGLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"540.65033"	"1619.93644"	"1619.93519"	"0.77"	"0.00041"	"16/128"	"16"	"128"	"5764302.65081787"	"HCD"	"MS2"	"2.112106"	"88.2"	"100.000"	"56.3849"	"17427"	"17427"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.7"	""	"121.6"	""	"144.3"	""	"128.6"	"3.5"	"150.2"	"152.4"	""	"967"	"56"	"36.000"	"29.000"	"0.000129239859858871"	"18"	"0"	"1.807E-05"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQTSSVLVSGLR"	"[K].mLQTSSVLVSGLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.9365"	"0.0000"	"1"	"1"	"1"	"810.47192"	"1619.93657"	"1619.93519"	"0.85"	"0.00069"	"11/128"	"11"	"128"	"3887602.203125"	"HCD"	"MS2"	"0"	"208.9"	"100.000"	"56.3826"	"17426"	"17426"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"297.9"	""	"355.8"	""	"312.1"	""	"263.3"	""	"363.5"	"385.7"	""	"967"	"63"	"36.000"	"29.000"	"2.22022239206626E-05"	"21"	"0"	"2.203E-06"	"1.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLnFDk.[A]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"540.65051"	"1619.93698"	"1619.94088"	"-2.40"	"-0.00130"	"12/100"	"12"	"100"	"4347151.79138184"	"HCD"	"MS2"	"17.94544"	"127.6"	"100.000"	"57.5811"	"17970"	"17970"	"17941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"190.0"	""	"202.8"	""	"162.0"	""	"231.4"	""	"202.6"	"218.2"	""	"955"	"46"	"36.000"	"29.000"	"0.00122454112743721"	"18"	"0.0001859"	"0.0003643"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDWSALLDK"	"[R].lTDWSALLDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08874"	"Serine/threonine-protein kinase N2 OS=Rattus norvegicus OX=10116 GN=Pkn2 PE=1 SV=2"	"O08874"	"Serine/threonine-protein kinase N2 OS=Rattus norvegicus OX=10116 GN=Pkn2 PE=1 SV=2"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"810.47272"	"1619.93816"	"1619.94088"	"-1.68"	"-0.00136"	"8/86"	"8"	"86"	"308977.605834961"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"76.0737"	"25502"	"25502"	"25471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.2"	""	"33.6"	""	"27.6"	""	"48.8"	""	"53.1"	"63.3"	""	"946"	"49"	"36.000"	"29.000"	"0.000658963167793128"	"24"	"0"	"2.036E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLnFDk.[A]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"810.47351"	"1619.93974"	"1619.94088"	"-0.70"	"-0.00057"	"9/100"	"9"	"100"	"2417490.78259277"	"HCD"	"MS2"	"0"	"180.0"	"100.000"	"57.3614"	"17826"	"17826"	"17803"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"306.7"	""	"292.8"	""	"207.9"	""	"306.6"	"1.2"	"304.2"	"282.9"	""	"916"	"64"	"36.000"	"29.000"	"1.65907293274848E-05"	"23"	"0"	"6.481E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vnTLPLNFDk.[A]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"810.47375"	"1619.94023"	"1619.94088"	"-0.40"	"-0.00032"	"9/100"	"9"	"100"	"1182053.77789307"	"HCD"	"MS2"	"34.9915"	"99.1"	"100.000"	"60.1309"	"19007"	"19007"	"18979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.6"	""	"162.6"	""	"122.8"	""	"158.2"	"1.0"	"171.8"	"166.1"	""	"920"	"47"	"36.000"	"29.000"	"0.000967738082292577"	"22"	"0"	"6.327E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLnFDk.[A]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8971"	"0.0000"	"1"	"1"	"1"	"810.47406"	"1619.94084"	"1619.94088"	"-0.02"	"-0.00002"	"18/100"	"18"	"100"	"2529948.85394287"	"HCD"	"MS2"	"16.66306"	"172.9"	"100.000"	"57.5049"	"17939"	"17939"	"17909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.9"	""	"289.7"	""	"216.3"	""	"304.1"	""	"267.8"	"273.2"	""	"932"	"68"	"36.000"	"29.000"	"6.87679244506566E-06"	"22"	"0"	"2.869E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vnTLPLNFDk.[A]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"540.65186"	"1619.94101"	"1619.94088"	"0.08"	"0.00004"	"10/100"	"10"	"100"	"1661549.94812012"	"HCD"	"MS2"	"48.90879"	"65.8"	"100.000"	"60.0091"	"18904"	"18904"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.5"	""	"97.5"	""	"91.9"	""	"97.8"	"1.9"	"124.4"	"113.9"	""	"938"	"43"	"36.000"	"29.000"	"0.00258924319022675"	"23"	"0.0001308"	"0.0002865"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"810.47424"	"1619.94121"	"1619.94425"	"-1.88"	"-0.00152"	"9/96"	"9"	"96"	"4634113.40588379"	"HCD"	"MS2"	"100"	"300.7"	"100.000"	"45.8219"	"13188"	"13188"	"13170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"465.5"	""	"462.8"	""	"405.1"	""	"304.8"	""	"592.8"	"629.4"	""	"937"	"46"	"36.000"	"29.000"	"0.00107822549145589"	"22"	"0"	"0.0001734"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vNTLPLnFDk.[A]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"540.65216"	"1619.94193"	"1619.94088"	"0.65"	"0.00035"	"12/100"	"12"	"100"	"3878423.96136475"	"HCD"	"MS2"	"17.82436"	"117.7"	"100.000"	"57.4006"	"17842"	"17842"	"17819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.6"	""	"178.6"	""	"161.9"	""	"206.7"	""	"189.8"	"194.3"	""	"933"	"44"	"36.000"	"29.000"	"0.00194469567388912"	"17"	"0.0001859"	"0.0003373"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"540.65222"	"1619.94211"	"1619.94425"	"-1.32"	"-0.00071"	"11/96"	"11"	"96"	"19674793.7687378"	"HCD"	"MS2"	"4.15346"	"359.9"	"74.510"	"45.5809"	"13039"	"13039"	"13027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"532.4"	""	"511.3"	""	"470.3"	""	"432.5"	""	"696.3"	"775.5"	""	"934"	"33"	"36.000"	"29.000"	"0.0213460184550147"	"16"	"0.0001889"	"0.0006021"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"540.65228"	"1619.94229"	"1619.94425"	"-1.21"	"-0.00065"	"11/96"	"11"	"96"	"23831190.770813"	"HCD"	"MS2"	"0"	"364.3"	"64.372"	"45.8448"	"13197"	"13197"	"13181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"553.0"	""	"512.6"	""	"478.6"	""	"410.1"	""	"730.7"	"777.4"	""	"946"	"32"	"36.000"	"29.000"	"0.0276605709800339"	"17"	"0.0001308"	"0.0003089"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLPLNFDK"	"[K].vnTLPLNFDk.[A]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"810.47498"	"1619.94267"	"1619.94088"	"1.11"	"0.00090"	"9/100"	"9"	"100"	"1216990.34277344"	"HCD"	"MS2"	"35.74553"	"110.8"	"100.000"	"59.9977"	"18899"	"18899"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.4"	""	"184.2"	""	"136.5"	""	"172.7"	""	"183.7"	"215.5"	""	"936"	"55"	"36.000"	"29.000"	"0.000163021863436854"	"22"	"0"	"3.72E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"810.47504"	"1619.94280"	"1619.94425"	"-0.90"	"-0.00073"	"10/96"	"10"	"96"	"4650546.21472168"	"HCD"	"MS2"	"0"	"297.6"	"100.000"	"45.5646"	"13033"	"13033"	"13020"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"491.7"	""	"453.2"	""	"389.8"	""	"303.4"	"0.4"	"554.5"	"627.8"	""	"935"	"55"	"36.000"	"29.000"	"0.000146481107611754"	"26"	"0"	"2.719E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8413"	"0.0000"	"1"	"1"	"1"	"810.47504"	"1619.94280"	"1619.94425"	"-0.90"	"-0.00073"	"10/96"	"10"	"96"	"53691738.7709961"	"HCD"	"MS2"	"0"	"418.1"	"13.074"	"46.0969"	"13298"	"13298"	"13284"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"659.1"	""	"565.4"	""	"566.7"	""	"402.0"	"1.4"	"803.7"	"968.4"	""	"935"	"63"	"36.000"	"29.000"	"2.60484337625677E-05"	"26"	"0"	"4.965E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"540.65247"	"1619.94284"	"1619.94425"	"-0.87"	"-0.00047"	"10/96"	"10"	"96"	"4006163.54730225"	"HCD"	"MS2"	"60.52894"	"131.2"	"100.000"	"44.8161"	"12780"	"12780"	"12759"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.1"	""	"191.3"	""	"189.3"	""	"192.7"	"1.5"	"230.0"	"238.8"	""	"935"	"33"	"36.000"	"29.000"	"0.021816326029693"	"22"	"0.0001889"	"0.0008638"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDWSALLDK"	"[R].lTDWSALLDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08874"	"Serine/threonine-protein kinase N2 OS=Rattus norvegicus OX=10116 GN=Pkn2 PE=1 SV=2"	"O08874"	"Serine/threonine-protein kinase N2 OS=Rattus norvegicus OX=10116 GN=Pkn2 PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"810.47528"	"1619.94328"	"1619.94088"	"1.48"	"0.00120"	"12/86"	"12"	"86"	"250187.087524414"	"HCD"	"MS2"	"22.75847"	"21.4"	"100.000"	"76.2841"	"25536"	"25536"	"25505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.8"	""	"21.9"	""	"29.0"	""	"47.6"	""	"43.1"	"40.1"	""	"922"	"27"	"36.000"	"29.000"	"0.0821676611793569"	"16"	"0.0002277"	"0.001277"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"810.47534"	"1619.94341"	"1619.94425"	"-0.52"	"-0.00042"	"10/96"	"10"	"96"	"46781740.5473633"	"HCD"	"MS2"	"0"	"353.8"	"12.467"	"45.8556"	"13151"	"13151"	"13133"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"558.5"	""	"483.0"	""	"477.0"	""	"329.9"	""	"686.8"	"823.1"	""	"922"	"55"	"36.000"	"29.000"	"0.000150556990631447"	"26"	"0"	"5.236E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"810.47559"	"1619.94390"	"1619.94425"	"-0.22"	"-0.00018"	"9/96"	"9"	"96"	"2475723.20367432"	"HCD"	"MS2"	"0"	"166.7"	"100.000"	"46.1676"	"13279"	"13279"	"13260"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"258.3"	""	"233.1"	""	"233.0"	""	"179.9"	"0.2"	"308.3"	"367.8"	""	"912"	"70"	"36.000"	"29.000"	"4.96552122560046E-06"	"24"	"0"	"4.565E-05"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"540.65283"	"1619.94394"	"1619.94425"	"-0.19"	"-0.00010"	"11/96"	"11"	"96"	"169788894.142578"	"HCD"	"MS2"	"11.26137"	"175.7"	"4.265"	"46.1382"	"13315"	"13315"	"13296"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.5"	"2.7"	"211.2"	""	"228.0"	""	"196.1"	""	"380.9"	"411.2"	""	"910"	"47"	"36.000"	"29.000"	"0.000952821167412157"	"19"	"0.0001889"	"0.0006876"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"810.47571"	"1619.94414"	"1619.94425"	"-0.07"	"-0.00006"	"9/96"	"9"	"96"	"3425708.56958008"	"HCD"	"MS2"	"5.572447"	"220.4"	"100.000"	"46.3903"	"13418"	"13418"	"13404"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.5"	""	"299.4"	""	"303.5"	""	"203.8"	"0.6"	"428.9"	"512.1"	""	"885"	"68"	"36.000"	"29.000"	"7.39457596832489E-06"	"25"	"0"	"5.604E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"810.47577"	"1619.94426"	"1619.94425"	"0.01"	"0.00001"	"7/96"	"7"	"96"	"419432.690551758"	"HCD"	"MS2"	"100"	"41.5"	"100.000"	"46.5345"	"13430"	"13430"	"13400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.1"	""	"55.3"	""	"53.3"	""	"62.7"	""	"83.9"	"83.3"	""	"885"	"6"	"36.000"	"29.000"	"12.1314657107809"	"17"	"0.0005564"	"0.003309"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"540.65302"	"1619.94449"	"1619.94425"	"0.15"	"0.00008"	"11/96"	"11"	"96"	"129454825.865234"	"HCD"	"MS2"	"11.96389"	"190.1"	"5.859"	"45.8969"	"13168"	"13168"	"13149"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.7"	""	"241.2"	""	"235.2"	""	"210.1"	""	"410.5"	"465.7"	""	"887"	"47"	"36.000"	"29.000"	"0.000920224144991252"	"19"	"0.0001889"	"0.0007657"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"540.65314"	"1619.94486"	"1619.94425"	"0.38"	"0.00020"	"11/96"	"11"	"96"	"1682664.98999023"	"HCD"	"MS2"	"27.84134"	"76.6"	"100.000"	"44.6945"	"12681"	"12681"	"12657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.5"	""	"96.5"	""	"109.0"	""	"123.6"	""	"162.8"	"138.1"	""	"894"	"47"	"36.000"	"29.000"	"0.00091265686126728"	"19"	"0.0001308"	"0.0003107"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"810.47668"	"1619.94609"	"1619.94425"	"1.14"	"0.00092"	"13/96"	"13"	"96"	"767001.265991211"	"HCD"	"MS2"	"0"	"61.8"	"100.000"	"44.5523"	"12623"	"12623"	"12604"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.0"	""	"95.2"	""	"86.6"	""	"69.5"	""	"117.1"	"130.0"	""	"900"	"42"	"36.000"	"29.000"	"0.00271776883219371"	"19"	"0.0001308"	"0.0002793"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"810.47675"	"1619.94621"	"1619.94425"	"1.21"	"0.00098"	"13/96"	"13"	"96"	"486678.372619629"	"HCD"	"MS2"	"0"	"45.1"	"100.000"	"46.8355"	"13601"	"13601"	"13570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.7"	""	"55.3"	""	"62.1"	""	"59.6"	""	"90.4"	"96.1"	""	"901"	"44"	"36.000"	"29.000"	"0.00183524815150753"	"22"	"0"	"9.242E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KITQSNAIMR"	"[R].kITQSNAIMR.[Y]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"1"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"540.66010"	"1619.96573"	"1619.96672"	"-0.61"	"-0.00033"	"8/94"	"8"	"94"	"12723607.3942261"	"HCD"	"MS2"	"5.650394"	"493.0"	"100.000"	"30.0671"	"6760"	"6760"	"6729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1024.7"	""	"809.6"	""	"807.6"	""	"589.0"	"0.9"	"723.2"	"693.9"	""	"728"	"30"	"35.000"	"28.000"	"0.0353265628077358"	"18"	"0"	"0.0001483"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KITQSNAIMR"	"[R].kITQSNAIMR.[Y]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"1"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"540.66016"	"1619.96592"	"1619.96672"	"-0.49"	"-0.00027"	"8/94"	"8"	"94"	"12312584.900238"	"HCD"	"MS2"	"11.10271"	"516.6"	"100.000"	"30.0071"	"6694"	"6694"	"6666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1059.6"	""	"857.3"	""	"821.3"	""	"640.5"	""	"772.6"	"723.1"	""	"730"	"29"	"35.000"	"28.000"	"0.0438826518635356"	"17"	"0"	"0.0001272"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DRLEGLLAFK"	"[K].dRLEGLLAFk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1LU71"	"Methylglutaconyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Auh PE=1 SV=2"	"F1LU71"	"Methylglutaconyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Auh PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"7"	"540.66705"	"1619.98661"	"1619.98850"	"-1.17"	"-0.00063"	"6/94"	"6"	"94"	"3654381.18585205"	"HCD"	"MS2"	"19.49003"	"118.2"	"100.000"	"55.1544"	"16978"	"16978"	"16949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"189.2"	""	"156.9"	""	"158.7"	""	"197.8"	""	"222.8"	"200.7"	""	"597"	"2"	"34.000"	"27.000"	"17.903763626227"	"13"	"0.0009727"	"0.01056"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTDPSGLSK"	"[K].kTDPSGLSk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.66858"	"1619.99118"	"1619.99353"	"-1.45"	"-0.00078"	"7/92"	"7"	"92"	"2514734.83068848"	"HCD"	"MS2"	"12.18366"	"168.8"	"100.000"	"29.7708"	"6597"	"6597"	"6572"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.1"	""	"225.8"	""	"240.7"	""	"249.8"	""	"324.6"	"315.0"	""	"532"	"6"	"34.000"	"27.000"	"6.10775540397888"	"13"	"0.00103"	"0.01203"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQVLTSEK"	"[K].kQVLTSEk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"540.68109"	"1620.02872"	"1620.02992"	"-0.74"	"-0.00040"	"7/74"	"7"	"74"	"12507151.2637329"	"HCD"	"MS2"	"44.28381"	"700.8"	"100.000"	"30.1977"	"6813"	"6813"	"6790"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1570.9"	""	"1040.6"	""	"804.8"	""	"1101.9"	""	"1062.5"	"1038.1"	""	"243"	"14"	"30.000"	"23.000"	"0.531589357767276"	"14"	"0.0002277"	"0.001172"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQVLTSEK"	"[K].kQVLTSEk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"540.68115"	"1620.02890"	"1620.02992"	"-0.63"	"-0.00034"	"7/74"	"7"	"74"	"11412437.3078003"	"HCD"	"MS2"	"26.85222"	"644.8"	"100.000"	"30.1515"	"6753"	"6753"	"6730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1363.4"	""	"939.8"	""	"768.9"	""	"1048.9"	"0.3"	"950.7"	"1014.9"	""	"248"	"15"	"30.000"	"23.000"	"0.420166753612612"	"15"	"0.0003839"	"0.001659"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].LHFFMPGFAPLTSR.[G]"	""	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"540.94952"	"1620.83402"	"1620.83553"	"-0.93"	"-0.00050"	"13/106"	"13"	"106"	"5278750.7890625"	"HCD"	"MS2"	"15.32776"	"69.2"	"100.000"	"61.6024"	"19607"	"19607"	"19587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.6"	""	"84.5"	""	"92.5"	""	"138.0"	"1.7"	"122.6"	"128.8"	"NoQuanLabels"	"1049"	"39"	"37.000"	"30.000"	"0.0066641611818188"	"23"	"0.0001308"	"0.0002085"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].LHFFMPGFAPLTSR.[G]"	""	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.7903"	"0.0000"	"1"	"1"	"1"	"540.94952"	"1620.83402"	"1620.83553"	"-0.93"	"-0.00050"	"14/106"	"14"	"106"	"10703204.5030518"	"HCD"	"MS2"	"2.238044"	"16.7"	"100.000"	"61.2860"	"19478"	"19478"	"19459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.4"	""	"21.0"	""	"25.9"	""	"29.7"	"2.0"	"25.5"	"31.3"	"NoQuanLabels"	"1049"	"62"	"37.000"	"30.000"	"3.20439092062972E-05"	"29"	"0"	"1.565E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].LHFFMPGFAPLTSR.[G]"	""	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"810.92084"	"1620.83440"	"1620.83553"	"-0.70"	"-0.00057"	"8/106"	"8"	"106"	"1080512.10894775"	"HCD"	"MS2"	"7.373057"	"42.6"	"100.000"	"61.4175"	"19532"	"19532"	"19507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.7"	""	"49.8"	""	"65.4"	""	"80.3"	""	"79.3"	"76.4"	"NoQuanLabels"	"1058"	"29"	"37.000"	"30.000"	"0.0708688967648319"	"14"	"0.0004557"	"0.002597"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].LHFFMPGFAPLTSR.[G]"	""	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"540.94983"	"1620.83493"	"1620.83553"	"-0.37"	"-0.00020"	"14/106"	"14"	"106"	"9470469.42474365"	"HCD"	"MS2"	"1.765765"	"24.1"	"100.000"	"61.1226"	"19358"	"19358"	"19337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.6"	""	"32.7"	""	"30.2"	""	"43.2"	"7.2"	"46.4"	"39.2"	"NoQuanLabels"	"1054"	"54"	"37.000"	"30.000"	"0.000209319946570395"	"24"	"7.476E-05"	"0.000187"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].LHFFMPGFAPLTSR.[G]"	""	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"810.92120"	"1620.83513"	"1620.83553"	"-0.25"	"-0.00020"	"8/106"	"8"	"106"	"1082895.63769531"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"61.3460"	"19503"	"19503"	"19475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.7"	""	"47.6"	""	"48.5"	""	"69.8"	""	"72.7"	"70.2"	"NoQuanLabels"	"1047"	"26"	"37.000"	"30.000"	"0.134870412569085"	"19"	"0.0002277"	"0.001302"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].LHFFMPGFAPLTSR.[G]"	""	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"810.92163"	"1620.83599"	"1620.83553"	"0.28"	"0.00023"	"7/106"	"7"	"106"	"1188521.75750732"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"61.2193"	"19398"	"19398"	"19369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.6"	""	"62.2"	""	"65.6"	""	"77.9"	""	"88.9"	"85.1"	"NoQuanLabels"	"1065"	"48"	"37.000"	"30.000"	"0.00093179336169263"	"20"	"0.0001889"	"0.000411"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].LHFFMPGFAPLTSR.[G]"	""	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"540.95032"	"1620.83640"	"1620.83553"	"0.54"	"0.00029"	"14/106"	"14"	"106"	"5618012.92932129"	"HCD"	"MS2"	"17.02369"	"69.3"	"100.000"	"61.4294"	"19483"	"19483"	"19465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.6"	""	"87.5"	""	"91.5"	""	"136.2"	"2.1"	"130.3"	"135.6"	"NoQuanLabels"	"1062"	"46"	"37.000"	"30.000"	"0.00121365296459235"	"23"	"7.476E-05"	"0.0002038"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFAAAQIGNSFR"	"[K].lPFAAAQIGNSFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"540.97302"	"1620.90451"	"1620.90594"	"-0.88"	"-0.00048"	"17/108"	"17"	"108"	"3874385.96221924"	"HCD"	"MS2"	"14.46263"	"67.3"	"100.000"	"63.0271"	"20189"	"20189"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.7"	""	"81.5"	""	"110.4"	""	"120.9"	"0.1"	"118.4"	"118.4"	""	"1015"	"28"	"37.000"	"30.000"	"0.0721831859464831"	"15"	"0"	"5.7E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFAAAQIGNSFR"	"[K].lPFAAAQIGNSFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"810.95612"	"1620.90495"	"1620.90594"	"-0.61"	"-0.00049"	"11/108"	"11"	"108"	"1765786.00164795"	"HCD"	"MS2"	"44.31422"	"63.0"	"100.000"	"62.9510"	"20158"	"20158"	"20131"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.7"	""	"98.1"	""	"91.2"	""	"94.8"	""	"107.5"	"115.6"	""	"1017"	"38"	"37.000"	"30.000"	"0.00898030231818915"	"20"	"0"	"7.773E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFAAAQIGNSFR"	"[K].lPFAAAQIGNSFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"540.97333"	"1620.90543"	"1620.90594"	"-0.32"	"-0.00017"	"13/108"	"13"	"108"	"3122037.52624512"	"HCD"	"MS2"	"11.70067"	"65.9"	"100.000"	"63.0011"	"20125"	"20125"	"20105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.7"	""	"83.3"	""	"114.6"	""	"101.9"	""	"115.6"	"125.1"	""	"1020"	"27"	"37.000"	"30.000"	"0.0989851797572317"	"17"	"0"	"4.441E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFAAAQIGNSFR"	"[K].lPFAAAQIGNSFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"810.95746"	"1620.90764"	"1620.90594"	"1.05"	"0.00085"	"8/108"	"8"	"108"	"1908513.80285645"	"HCD"	"MS2"	"27.36907"	"67.0"	"100.000"	"62.8949"	"20082"	"20082"	"20057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.4"	""	"95.4"	""	"101.1"	""	"107.9"	"1.3"	"113.0"	"114.1"	""	"1069"	"41"	"37.000"	"30.000"	"0.00407331230858583"	"21"	"0"	"3.885E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQIIPYEFNR"	"[R].vLQIIPYEFNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03348"	"Receptor-type tyrosine-protein phosphatase alpha OS=Rattus norvegicus OX=10116 GN=Ptpra PE=1 SV=1"	"Q03348"	"Receptor-type tyrosine-protein phosphatase alpha OS=Rattus norvegicus OX=10116 GN=Ptpra PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"810.96826"	"1620.92925"	"1620.93109"	"-1.14"	"-0.00092"	"10/96"	"10"	"96"	"620246.015869141"	"HCD"	"MS2"	"9.891126"	"40.4"	"100.000"	"69.1665"	"22686"	"22686"	"22666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.5"	""	"48.9"	""	"59.5"	""	"70.5"	"0.1"	"78.6"	"71.4"	""	"935"	"35"	"36.000"	"29.000"	"0.0161354698139513"	"28"	"0.0001889"	"0.0004214"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQIIPYEFNR"	"[R].vLQIIPYEFNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03348"	"Receptor-type tyrosine-protein phosphatase alpha OS=Rattus norvegicus OX=10116 GN=Ptpra PE=1 SV=1"	"Q03348"	"Receptor-type tyrosine-protein phosphatase alpha OS=Rattus norvegicus OX=10116 GN=Ptpra PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"810.96887"	"1620.93047"	"1620.93109"	"-0.39"	"-0.00031"	"10/96"	"10"	"96"	"908950.484313965"	"HCD"	"MS2"	"100"	"55.4"	"100.000"	"69.2391"	"22665"	"22665"	"22634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.3"	""	"77.2"	""	"82.5"	""	"84.0"	"1.8"	"96.8"	"102.9"	""	"933"	"11"	"36.000"	"29.000"	"3.36396639038822"	"19"	"0.0001889"	"0.0006869"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVNMLMYHDR"	"[K].dVVNMLMYHDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"541.27295"	"1621.80429"	"1621.80280"	"0.92"	"0.00050"	"13/112"	"13"	"112"	"5666453.18847656"	"HCD"	"MS2"	"49.47326"	"181.1"	"100.000"	"47.5395"	"13889"	"13889"	"13858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.1"	""	"216.6"	""	"235.9"	""	"336.7"	""	"397.6"	"328.9"	""	"737"	"29"	"35.000"	"28.000"	"0.0471452010582048"	"18"	"0.0001308"	"0.0002301"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEVTTIHNLFR"	"[K].yEVTTIHNLFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"541.30103"	"1621.88852"	"1621.88996"	"-0.88"	"-0.00048"	"13/92"	"13"	"92"	"5021324.17614746"	"HCD"	"MS2"	"18.79535"	"137.1"	"100.000"	"46.7187"	"13505"	"13505"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.9"	""	"163.6"	""	"163.8"	""	"214.1"	"0.8"	"377.0"	"232.3"	""	"976"	"16"	"36.000"	"29.000"	"1.29246806764007"	"16"	"0.0001859"	"0.0003275"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEVTTIHNLFR"	"[K].yEVTTIHNLFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.30151"	"1621.88999"	"1621.88996"	"0.02"	"0.00001"	"8/92"	"8"	"92"	"6843024.37243652"	"HCD"	"MS2"	"19.20601"	"199.9"	"100.000"	"46.9781"	"13659"	"13659"	"13634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"254.9"	""	"269.5"	""	"289.9"	""	"301.0"	"1.2"	"414.5"	"364.9"	""	"1008"	"42"	"37.000"	"30.000"	"0.00347080757357515"	"15"	"0"	"4.308E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYLGHSYVTAIR"	"[R].lYLGHSYVTAIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"811.46527"	"1621.92327"	"1621.92634"	"-1.90"	"-0.00154"	"9/94"	"9"	"94"	"3236705.36297607"	"HCD"	"MS2"	"0"	"143.3"	"100.000"	"41.4877"	"11428"	"11428"	"11405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.0"	""	"237.4"	""	"234.5"	""	"231.5"	""	"230.0"	"253.3"	""	"890"	"27"	"36.000"	"29.000"	"0.0982562106193411"	"18"	"0"	"7.713E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYLGHSYVTAIR"	"[R].lYLGHSYVTAIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"811.46576"	"1621.92424"	"1621.92634"	"-1.30"	"-0.00105"	"10/94"	"10"	"94"	"511274.870605469"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"41.8248"	"11566"	"11566"	"11538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.9"	""	"55.5"	""	"45.7"	""	"49.5"	""	"64.1"	"57.0"	""	"905"	"22"	"36.000"	"29.000"	"0.265838932019724"	"21"	"0.0001889"	"0.0005054"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYLGHSYVTAIR"	"[R].lYLGHSYVTAIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"541.31299"	"1621.92441"	"1621.92634"	"-1.19"	"-0.00064"	"8/94"	"8"	"94"	"48564085.5318604"	"HCD"	"MS2"	"2.516002"	"203.6"	"38.056"	"41.3686"	"11379"	"11379"	"11357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.7"	""	"359.8"	""	"321.7"	""	"325.3"	""	"315.9"	"353.9"	""	"903"	"50"	"36.000"	"29.000"	"0.000446331722237608"	"17"	"0"	"0.0001415"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYLGHSYVTAIR"	"[R].lYLGHSYVTAIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"541.31317"	"1621.92496"	"1621.92634"	"-0.85"	"-0.00046"	"9/94"	"9"	"94"	"63403328.5026855"	"HCD"	"MS2"	"1.832724"	"112.1"	"19.056"	"41.6804"	"11507"	"11507"	"11490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.9"	""	"191.4"	""	"192.4"	""	"187.4"	""	"166.4"	"193.8"	""	"901"	"70"	"36.000"	"29.000"	"4.7173141089693E-06"	"24"	"0"	"2.163E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYLGHSYVTAIR"	"[R].lYLGHSYVTAIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"811.46613"	"1621.92497"	"1621.92634"	"-0.84"	"-0.00068"	"9/94"	"9"	"94"	"3274244.74560547"	"HCD"	"MS2"	"0"	"156.0"	"100.000"	"41.2723"	"11296"	"11296"	"11269"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.3"	""	"290.2"	""	"227.0"	""	"276.4"	""	"225.8"	"263.9"	""	"901"	"20"	"36.000"	"29.000"	"0.469564001941683"	"19"	"0"	"0.000142"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYLGHSYVTAIR"	"[R].lYLGHSYVTAIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9571"	"0.0000"	"1"	"1"	"1"	"541.31329"	"1621.92533"	"1621.92634"	"-0.63"	"-0.00034"	"9/94"	"9"	"94"	"66188297.8447266"	"HCD"	"MS2"	"2.627674"	"85.6"	"14.351"	"41.4624"	"11373"	"11373"	"11355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.1"	""	"147.2"	""	"151.1"	""	"128.0"	""	"131.1"	"158.6"	""	"901"	"70"	"36.000"	"29.000"	"4.69564001941684E-06"	"20"	"0"	"1.518E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYLGHSYVTAIR"	"[R].lYLGHSYVTAIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"541.31329"	"1621.92533"	"1621.92634"	"-0.63"	"-0.00034"	"9/94"	"9"	"94"	"68302241.8603516"	"HCD"	"MS2"	"2.311534"	"167.8"	"25.922"	"41.1761"	"11256"	"11256"	"11237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.8"	""	"293.6"	""	"284.4"	""	"266.8"	""	"249.8"	"286.5"	""	"901"	"65"	"36.000"	"29.000"	"1.27848252231292E-05"	"20"	"0"	"2.347E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYLGHSYVTAIR"	"[R].lYLGHSYVTAIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"811.46686"	"1621.92644"	"1621.92634"	"0.06"	"0.00005"	"7/94"	"7"	"94"	"596606.433776855"	"HCD"	"MS2"	"26.24238"	"36.5"	"100.000"	"41.5954"	"11428"	"11428"	"11403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.6"	""	"56.0"	""	"44.2"	""	"62.0"	""	"57.8"	"67.4"	""	"910"	"20"	"36.000"	"29.000"	"0.412108333408681"	"21"	"0.0001889"	"0.0004358"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTGDWIPFK"	"[R].sLTGDWIPFk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9R1R4"	"Tudor domain-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Tdrd7 PE=1 SV=1"	"Q9R1R4"	"Tudor domain-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Tdrd7 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"811.46997"	"1621.93266"	"1621.93540"	"-1.69"	"-0.00137"	"6/80"	"6"	"80"	"244666.283996582"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"69.4955"	"22821"	"22821"	"22794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.6"	""	"31.9"	""	"33.9"	""	"43.8"	""	"59.9"	"50.7"	""	"846"	"9"	"36.000"	"29.000"	"5.75891100683097"	"14"	"0.008433"	"0.3569"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIQASEDLLK"	"[K].fIQASEDLLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05982"	"Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"Q05982"	"Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"811.48102"	"1621.95476"	"1621.95653"	"-1.09"	"-0.00088"	"18/90"	"18"	"90"	"2227208.35723877"	"HCD"	"MS2"	"29.7003"	"175.2"	"100.000"	"61.5653"	"19592"	"19592"	"19571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.5"	""	"202.0"	""	"236.1"	""	"343.2"	"4.7"	"333.0"	"328.6"	""	"744"	"65"	"35.000"	"28.000"	"1.0978498323199E-05"	""	"0"	"4.557E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTITGLPTDAK"	"[K].fTITGLPTDAk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63518"	"Myosin-binding protein C, slow-type (Fragment) OS=Rattus norvegicus OX=10116 GN=Mybpc1 PE=1 SV=1"	"Q63518"	"Myosin-binding protein C, slow-type (Fragment) OS=Rattus norvegicus OX=10116 GN=Mybpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"811.48126"	"1621.95525"	"1621.95653"	"-0.79"	"-0.00064"	"7/94"	"7"	"94"	"907011.906982422"	"HCD"	"MS2"	"21.59576"	"84.8"	"100.000"	"56.2439"	"17370"	"17370"	"17339"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.8"	""	"97.8"	""	"97.7"	""	"89.4"	"4.6"	"106.1"	"318.4"	""	"724"	"30"	"35.000"	"28.000"	"0.0358681164051182"	"17"	"0.0001308"	"0.0002132"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTITGLPTDAK"	"[K].fTITGLPTDAk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63518"	"Myosin-binding protein C, slow-type (Fragment) OS=Rattus norvegicus OX=10116 GN=Mybpc1 PE=1 SV=1"	"Q63518"	"Myosin-binding protein C, slow-type (Fragment) OS=Rattus norvegicus OX=10116 GN=Mybpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"811.48169"	"1621.95610"	"1621.95653"	"-0.26"	"-0.00021"	"12/94"	"12"	"94"	"928676.647277832"	"HCD"	"MS2"	"38.51421"	"86.3"	"100.000"	"56.4101"	"17492"	"17492"	"17461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.9"	""	"91.5"	""	"70.5"	""	"93.0"	""	"97.2"	"381.4"	""	"708"	"21"	"35.000"	"28.000"	"0.264242860477164"	"18"	"0.0003839"	"0.001556"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIQASEDLLK"	"[K].fIQASEDLLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05982"	"Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"Q05982"	"Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"811.48218"	"1621.95708"	"1621.95653"	"0.34"	"0.00027"	"18/90"	"18"	"90"	"2022512.68792725"	"HCD"	"MS2"	"29.97136"	"171.7"	"100.000"	"61.4042"	"19473"	"19473"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"201.1"	""	"204.5"	""	"221.3"	""	"350.7"	"3.0"	"324.9"	"323.0"	""	"711"	"65"	"35.000"	"28.000"	"1.02056249690978E-05"	""	"0"	"3.156E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFAESQPK"	"[K].kFAESQPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.33325"	"1621.98520"	"1621.98805"	"-1.76"	"-0.00095"	"9/72"	"9"	"72"	"16880254.288269"	"HCD"	"MS2"	"7.240548"	"705.7"	"70.936"	"28.4537"	"6136"	"6136"	"6116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1007.4"	""	"808.5"	""	"914.8"	""	"1315.9"	"1.5"	"1415.5"	"1226.6"	""	"525"	"3"	"34.000"	"27.000"	"12.0262245262565"	"13"	"0.003013"	"0.05807"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFAESQPK"	"[K].kFAESQPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"1"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"541.33356"	"1621.98612"	"1621.98805"	"-1.19"	"-0.00065"	"9/72"	"9"	"72"	"13347775.2438965"	"HCD"	"MS2"	"0"	"867.2"	"100.000"	"28.3630"	"6063"	"6063"	"6046"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1260.0"	""	"1035.4"	""	"1172.1"	""	"1533.4"	"6.6"	"1662.8"	"1547.6"	""	"507"	"13"	"34.000"	"27.000"	"1.36137560379859"	"18"	"0.0002277"	"0.001178"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAYGLALAK"	"[R].kAYGLALAk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.35779"	"1622.05881"	"1622.06082"	"-1.24"	"-0.00067"	"11/82"	"11"	"82"	"52155703.6594238"	"HCD"	"MS2"	"28.68304"	"721.0"	"24.765"	"38.3342"	"10137"	"10137"	"10113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1290.9"	""	"1052.3"	""	"1181.1"	""	"1049.9"	""	"1098.8"	"1139.3"	""	"104"	"29"	"27.000"	"20.000"	"0.00682343947489986"	"14"	"0.0001308"	"0.0002578"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAYGLALAK"	"[R].kAYGLALAk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.35822"	"1622.06009"	"1622.06082"	"-0.45"	"-0.00024"	"11/82"	"11"	"82"	"48062362.9990234"	"HCD"	"MS2"	"17.5938"	"647.2"	"23.776"	"38.2458"	"10057"	"10057"	"10039"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1130.1"	""	"931.1"	""	"1052.3"	""	"927.6"	""	"1005.4"	"1070.1"	""	"102"	"31"	"27.000"	"20.000"	"0.0037116770031378"	"14"	"0"	"0.0001707"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFGNSWSETYR"	"[R].fFGNSWSETYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.89130"	"1622.77532"	"1622.78007"	"-2.93"	"-0.00238"	"9/102"	"9"	"102"	"1324036.81616211"	"HCD"	"MS2"	"0"	"92.6"	"100.000"	"54.3527"	"16650"	"16650"	"16621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.6"	""	"134.4"	""	"142.8"	""	"140.7"	""	"153.9"	"159.5"	""	"529"	"22"	"34.000"	"27.000"	"0.154676977256215"	"14"	"0"	"0.0001739"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFGNSWSETYR"	"[R].fFGNSWSETYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.89221"	"1622.77715"	"1622.78007"	"-1.80"	"-0.00146"	"10/102"	"10"	"102"	"1544697.79333496"	"HCD"	"MS2"	"0"	"110.6"	"100.000"	"54.1991"	"16534"	"16534"	"16509"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.0"	""	"168.4"	""	"177.5"	""	"162.4"	"0.9"	"169.7"	"180.8"	""	"554"	"48"	"34.000"	"27.000"	"0.00048470753274903"	"15"	"0"	"2.573E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFGNSWSETYR"	"[R].fFGNSWSETYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.89392"	"1622.78057"	"1622.78007"	"0.30"	"0.00025"	"9/102"	"9"	"102"	"762630.927734375"	"HCD"	"MS2"	"21.37616"	"69.9"	"100.000"	"54.6743"	"16781"	"16781"	"16757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.7"	""	"95.2"	""	"97.9"	""	"102.7"	"0.9"	"136.2"	"138.6"	""	"563"	"16"	"34.000"	"27.000"	"0.675271466703986"	"14"	"0"	"0.0001812"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFGNSWSETYR"	"[R].fFGNSWSETYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.89417"	"1622.78105"	"1622.78007"	"0.60"	"0.00049"	"11/102"	"11"	"102"	"621148.548156738"	"HCD"	"MS2"	"13.18574"	"57.9"	"100.000"	"54.5253"	"16667"	"16667"	"16640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.2"	""	"79.2"	""	"88.0"	""	"86.0"	""	"108.4"	"112.0"	""	"572"	"2"	"34.000"	"27.000"	"16.8021954823516"	"13"	"0.00103"	"0.01216"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEGLPINDFSR"	"[K].fVEGLPINDFSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"541.62915"	"1622.87290"	"1622.87397"	"-0.66"	"-0.00036"	"9/112"	"9"	"112"	"3267897.33581543"	"HCD"	"MS2"	"48.27111"	"67.2"	"100.000"	"63.6137"	"20376"	"20376"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.7"	""	"87.2"	""	"94.8"	""	"106.0"	""	"132.0"	"146.1"	""	"996"	"29"	"36.000"	"29.000"	"0.061976827666215"	"18"	"0.0001889"	"0.000742"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEGLPINDFSR"	"[K].fVEGLPINDFSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"811.94025"	"1622.87322"	"1622.87397"	"-0.47"	"-0.00038"	"11/112"	"11"	"112"	"2608261.90686035"	"HCD"	"MS2"	"25.62668"	"134.9"	"100.000"	"63.5797"	"20415"	"20415"	"20387"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"200.1"	""	"172.2"	""	"188.1"	""	"206.4"	"2.7"	"236.4"	"271.9"	""	"1001"	"45"	"36.000"	"30.000"	"0.0017555131291326"	"24"	"0"	"2.122E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEGLPINDFSR"	"[K].fVEGLPINDFSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"811.94037"	"1622.87346"	"1622.87397"	"-0.32"	"-0.00026"	"7/112"	"7"	"112"	"1008483.60540771"	"HCD"	"MS2"	"0"	"64.9"	"100.000"	"63.8817"	"20538"	"20538"	"20515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.9"	""	"88.1"	""	"99.2"	""	"95.5"	""	"102.2"	"112.6"	""	"995"	"37"	"36.000"	"29.000"	"0.0103942482509989"	"18"	"7.476E-05"	"0.0001964"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEGLPINDFSR"	"[K].fVEGLPINDFSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"811.94080"	"1622.87432"	"1622.87397"	"0.21"	"0.00017"	"11/112"	"11"	"112"	"2783412.35760498"	"HCD"	"MS2"	"34.04141"	"153.4"	"100.000"	"63.5307"	"20342"	"20342"	"20313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.0"	""	"191.5"	""	"202.3"	""	"267.3"	"2.4"	"268.1"	"297.2"	""	"1010"	"40"	"37.000"	"30.000"	"0.00495782711225092"	"22"	"0"	"2.3E-05"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEGLPINDFSR"	"[K].fVEGLPINDFSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"541.62964"	"1622.87436"	"1622.87397"	"0.24"	"0.00013"	"9/112"	"9"	"112"	"3403535.33007813"	"HCD"	"MS2"	"41.4004"	"70.4"	"100.000"	"63.7184"	"20471"	"20471"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.5"	""	"89.7"	""	"104.9"	""	"100.1"	"1.0"	"132.7"	"145.4"	""	"1010"	"29"	"37.000"	"30.000"	"0.0710053999685607"	"17"	"0.0003839"	"0.001619"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEGLPINDFSR"	"[K].fVEGLPINDFSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"811.94110"	"1622.87493"	"1622.87397"	"0.59"	"0.00048"	"6/112"	"6"	"112"	"907836.103942871"	"HCD"	"MS2"	"4.855795"	"61.0"	"100.000"	"63.8327"	"20465"	"20465"	"20441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.5"	""	"85.3"	""	"98.6"	""	"88.8"	"3.6"	"104.6"	"103.3"	""	"1007"	"26"	"37.000"	"30.000"	"0.135831180423602"	"21"	"0.0001889"	"0.0008202"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPSHFSSDLK"	"[R].fPSHFSSDLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"541.63568"	"1622.89249"	"1622.89426"	"-1.09"	"-0.00059"	"8/82"	"8"	"82"	"21223974.5933838"	"HCD"	"MS2"	"43.8737"	"626.6"	"96.620"	"40.0438"	"10837"	"10837"	"10813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"858.6"	""	"836.3"	""	"866.9"	""	"1089.9"	""	"1171.2"	"1116.3"	""	"1005"	"42"	"37.000"	"30.000"	"0.00331998457623817"	"24"	"0"	"1.063E-05"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPSHFSSDLK"	"[R].fPSHFSSDLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"541.63580"	"1622.89286"	"1622.89426"	"-0.87"	"-0.00047"	"9/82"	"9"	"82"	"26087221.0267334"	"HCD"	"MS2"	"25.79836"	"697.2"	"85.628"	"39.9255"	"10744"	"10744"	"10725"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"913.9"	""	"893.9"	""	"972.1"	""	"1237.9"	""	"1283.4"	"1308.8"	""	"1007"	"42"	"37.000"	"30.000"	"0.00333426009613837"	"19"	"0"	"5.159E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVMPDGQFk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"811.95258"	"1622.89787"	"1622.89763"	"0.15"	"0.00012"	"15/94"	"15"	"94"	"3835812.94616699"	"HCD"	"MS2"	"24.9689"	"282.8"	"100.000"	"41.1507"	"11290"	"11290"	"11261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"502.3"	""	"424.8"	""	"433.9"	""	"308.0"	""	"475.2"	"535.8"	""	"969"	"49"	"36.000"	"29.000"	"0.000581157412375874"	"29"	"0"	"0.0001643"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVMPDGQFk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"811.95294"	"1622.89861"	"1622.89763"	"0.60"	"0.00049"	"9/94"	"9"	"94"	"3643153.7387085"	"HCD"	"MS2"	"19.19231"	"293.0"	"100.000"	"40.9881"	"11179"	"11179"	"11157"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"512.7"	""	"439.5"	""	"423.2"	""	"326.4"	""	"522.4"	"549.9"	""	"965"	"60"	"36.000"	"29.000"	"5.07571604119705E-05"	"28"	"0"	"0.0001458"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSATLLSGSDSK"	"[K].vSATLLSGSDSk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"811.97064"	"1622.93401"	"1622.93652"	"-1.55"	"-0.00126"	"11/106"	"11"	"106"	"2781553.82025146"	"HCD"	"MS2"	"13.64068"	"200.1"	"100.000"	"41.3480"	"11371"	"11371"	"11341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"312.7"	""	"345.1"	"2.3"	"226.2"	""	"358.3"	""	"324.6"	"326.7"	""	"814"	"38"	"36.000"	"29.000"	"0.00614602622744808"	"16"	"0"	"1.025E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLPPGFMFK"	"[R].lDLPPGFMFk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"811.97321"	"1622.93913"	"1622.93804"	"0.67"	"0.00055"	"6/72"	"6"	"72"	"257181.824890137"	"HCD"	"MS2"	"17.43431"	"26.1"	"100.000"	"76.1584"	"25485"	"25485"	"25457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.9"	""	"30.7"	""	"27.0"	""	"35.6"	""	"54.6"	"66.8"	""	"799"	"38"	"36.000"	"29.000"	"0.00580118591226303"	"19"	"0.0001889"	"0.0005128"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLPPGFMFK"	"[R].lDLPPGFMFk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"811.97333"	"1622.93938"	"1622.93804"	"0.82"	"0.00067"	"7/72"	"7"	"72"	"282163.199523926"	"HCD"	"MS2"	"28.58128"	"26.5"	"100.000"	"76.1064"	"25515"	"25515"	"25487"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.6"	""	"36.8"	""	"29.0"	""	"43.9"	""	"49.3"	"59.3"	""	"799"	"52"	"36.000"	"29.000"	"0.000244633981494047"	"17"	"0.0001308"	"0.0002604"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGLDLFFPK"	"[K].eVGLDLFFPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70600"	"Protein-tyrosine kinase 2-beta OS=Rattus norvegicus OX=10116 GN=Ptk2b PE=1 SV=1"	"P70600"	"Protein-tyrosine kinase 2-beta OS=Rattus norvegicus OX=10116 GN=Ptk2b PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"811.98102"	"1622.95476"	"1622.95580"	"-0.64"	"-0.00052"	"7/80"	"7"	"80"	"351695.579223633"	"HCD"	"MS2"	"0"	"28.8"	"100.000"	"77.0683"	"25900"	"25900"	"25877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.5"	""	"33.7"	""	"42.3"	""	"53.0"	""	"53.8"	"54.4"	""	"674"	"24"	"35.000"	"28.000"	"0.136656376446105"	"20"	"0.0001889"	"0.0008653"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGLDLFFPK"	"[K].eVGLDLFFPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70600"	"Protein-tyrosine kinase 2-beta OS=Rattus norvegicus OX=10116 GN=Ptk2b PE=1 SV=1"	"P70600"	"Protein-tyrosine kinase 2-beta OS=Rattus norvegicus OX=10116 GN=Ptk2b PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"541.65656"	"1622.95511"	"1622.95580"	"-0.42"	"-0.00023"	"7/80"	"7"	"80"	"596079.317321777"	"HCD"	"MS2"	"17.35832"	"19.4"	"100.000"	"77.2009"	"25903"	"25903"	"25881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.9"	""	"22.4"	""	"33.1"	""	"32.6"	""	"32.1"	"37.6"	""	"665"	"30"	"35.000"	"28.000"	"0.036626182042252"	"24"	"0.0001889"	"0.0004081"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGLDLFFPK"	"[K].eVGLDLFFPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70600"	"Protein-tyrosine kinase 2-beta OS=Rattus norvegicus OX=10116 GN=Ptk2b PE=1 SV=1"	"P70600"	"Protein-tyrosine kinase 2-beta OS=Rattus norvegicus OX=10116 GN=Ptk2b PE=1 SV=1"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"541.65680"	"1622.95584"	"1622.95580"	"0.03"	"0.00001"	"9/80"	"9"	"80"	"810028.576049805"	"HCD"	"MS2"	"34.73483"	"26.5"	"100.000"	"77.1234"	"25923"	"25923"	"25893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.2"	""	"38.0"	""	"36.8"	""	"43.7"	"0.7"	"47.7"	"53.0"	""	"690"	"32"	"35.000"	"28.000"	"0.0205977173871423"	"23"	"0.0001889"	"0.0004641"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGLDLFFPK"	"[K].eVGLDLFFPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70600"	"Protein-tyrosine kinase 2-beta OS=Rattus norvegicus OX=10116 GN=Ptk2b PE=1 SV=1"	"P70600"	"Protein-tyrosine kinase 2-beta OS=Rattus norvegicus OX=10116 GN=Ptk2b PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"811.98175"	"1622.95622"	"1622.95580"	"0.26"	"0.00021"	"8/80"	"8"	"80"	"285395.057006836"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"77.1823"	"25896"	"25896"	"25865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.1"	""	"33.4"	""	"27.6"	""	"35.5"	""	"48.8"	"49.0"	""	"681"	"19"	"35.000"	"28.000"	"0.459321861522458"	"17"	"0.0008731"	"0.008845"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKMDLTAK"	"[R].ekMDLTAk.[E]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"541.66254"	"1622.97306"	"1622.97544"	"-1.47"	"-0.00079"	"4/78"	"4"	"78"	"6564767.13519287"	"HCD"	"MS2"	"27.11726"	"463.5"	"100.000"	"34.0266"	"8328"	"8328"	"8305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1086.7"	""	"746.5"	""	"756.4"	""	"488.7"	""	"606.4"	"683.7"	""	"586"	"12"	"34.000"	"27.000"	"1.92693746345138"	"23"	"0.0003839"	"0.001786"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKMDLTAK"	"[R].ekMDLTAk.[E]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"541.66266"	"1622.97342"	"1622.97544"	"-1.24"	"-0.00067"	"9/78"	"9"	"78"	"6217308.703125"	"HCD"	"MS2"	"4.318067"	"462.6"	"100.000"	"34.0724"	"8390"	"8390"	"8380"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1043.5"	""	"745.4"	""	"788.4"	""	"513.6"	"1.9"	"576.5"	"687.0"	""	"590"	"7"	"34.000"	"27.000"	"6.149248105137"	"17"	"0.0001889"	"0.0006193"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEILASDLLK"	"[K].yEILASDLLk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08430"	"UDP-glucuronosyltransferase 1-6 OS=Rattus norvegicus OX=10116 GN=Ugt1a6 PE=1 SV=1"	"P08430"	"UDP-glucuronosyltransferase 1-6 OS=Rattus norvegicus OX=10116 GN=Ugt1a6 PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"541.66431"	"1622.97837"	"1622.97693"	"0.88"	"0.00048"	"6/82"	"6"	"82"	"1181745.73864746"	"HCD"	"MS2"	"55.74475"	"47.7"	"100.000"	"69.3958"	"22729"	"22729"	"22698"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.8"	""	"65.3"	""	"75.9"	""	"67.6"	""	"93.9"	"85.0"	""	"562"	"5"	"34.000"	"27.000"	"7.99293571192864"	"15"	"0.0004166"	"0.002319"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LDYITALNIK"	"[].lDYITALnIk.[]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"541.66809"	"1622.98972"	"1622.97693"	"7.88"	"0.00426"	"5/82"	"5"	"82"	"395729.339660645"	"HCD"	"MS2"	"15.71051"	"14.1"	"100.000"	"77.3795"	"26027"	"26027"	"26005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.7"	""	"17.8"	""	"19.8"	""	"21.8"	""	"26.7"	"31.4"	""	"505"	"1"	"34.000"	"27.000"	"21.4418069946669"	"13"	"0.004631"	"0.1337"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQWMIQEPHR"	"[K].vAQWMIQEPHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"541.95880"	"1623.86185"	"1623.86270"	"-0.52"	"-0.00028"	"14/96"	"14"	"96"	"14000251.401001"	"HCD"	"MS2"	"34.29707"	"240.6"	"100.000"	"40.4344"	"10996"	"10996"	"10973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"323.9"	""	"326.6"	""	"325.5"	""	"383.5"	""	"461.0"	"460.8"	""	"974"	"13"	"36.000"	"29.000"	"2.62137384085433"	"18"	"0"	"0.0001664"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQWMIQEPHR"	"[K].vAQWMIQEPHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.95923"	"1623.86313"	"1623.86270"	"0.27"	"0.00015"	"13/96"	"13"	"96"	"15692656.9607544"	"HCD"	"MS2"	"40.66681"	"304.5"	"100.000"	"40.2976"	"10896"	"10896"	"10869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"423.8"	""	"435.6"	""	"394.3"	""	"497.3"	"0.6"	"552.4"	"581.5"	""	"989"	"3"	"36.000"	"29.000"	"24.1638591695031"	"13"	"0.0001889"	"0.0004432"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSQLALFSVSDK"	"[M].aSSQLALFSVSDk.[T]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.9155"	"0.0000"	"1"	"1"	"1"	"812.44263"	"1623.87798"	"1623.87912"	"-0.70"	"-0.00057"	"9/134"	"9"	"134"	"450189.261230469"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"70.0003"	"23027"	"23027"	"23002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.1"	""	"41.0"	""	"41.4"	""	"42.6"	""	"48.8"	"50.9"	""	"962"	"71"	"36.000"	"29.000"	"3.73374863098401E-06"	"23"	"0"	"1.985E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSQLALFSVSDK"	"[M].aSSQLALFSVSDk.[T]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"812.44348"	"1623.87969"	"1623.87912"	"0.35"	"0.00028"	"8/134"	"8"	"134"	"548068.022644043"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"69.9954"	"22973"	"22973"	"22953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.9"	""	"49.6"	""	"45.8"	""	"54.1"	"1.2"	"62.0"	"60.6"	""	"974"	"54"	"36.000"	"29.000"	"0.00017681901267304"	"27"	"0"	"9.544E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAFLNLIGFVSR"	"[R].sAAFLNLIGFVSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"541.98413"	"1623.93784"	"1623.94199"	"-2.56"	"-0.00138"	"11/132"	"11"	"132"	"202795.388305664"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"85.1984"	"29216"	"29216"	"29186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.3"	""	"8.1"	""	"7.4"	""	"10.6"	""	"4.8"	"9.9"	""	"782"	"25"	"35.000"	"28.000"	"0.110707427035756"	"17"	"0.0001889"	"0.0007704"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAFLNLIGFVSR"	"[R].sAAFLNLIGFVSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"812.47345"	"1623.93962"	"1623.94199"	"-1.46"	"-0.00119"	"6/132"	"6"	"132"	"112497.826721191"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"85.1731"	"29205"	"29205"	"29186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"10.0"	""	"13.9"	""	"15.9"	""	"12.3"	"13.6"	""	"782"	"33"	"35.000"	"28.000"	"0.0187144366098151"	"16"	"0.0001889"	"0.0009109"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAFLNLIGFVSR"	"[R].sAAFLNLIGFVSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"541.98560"	"1623.94223"	"1623.94199"	"0.15"	"0.00008"	"6/132"	"6"	"132"	"261046.737915039"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"85.1417"	"29142"	"29142"	"29115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	"7.8"	""	"6.3"	""	"6.5"	""	"13.3"	"9.0"	""	"770"	"31"	"35.000"	"28.000"	"0.0273187440665905"	"16"	"7.476E-05"	"0.0001927"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAFLNLIGFVSR"	"[R].sAAFLNLIGFVSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.47571"	"1623.94414"	"1623.94199"	"1.32"	"0.00107"	"5/132"	"5"	"132"	"111182.163452148"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"85.1024"	"29126"	"29126"	"29099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.3"	""	"13.5"	""	"13.9"	""	"12.9"	""	"10.0"	"15.4"	""	"731"	"21"	"35.000"	"28.000"	"0.292339420205069"	"14"	"0.001007"	"0.01094"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAALASVPALPGES"	"[R].lVAALASVPALPGES.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"812.47839"	"1623.94951"	"1623.95189"	"-1.46"	"-0.00119"	"6/130"	"6"	"130"	"236453.194152832"	"HCD"	"MS2"	"9.206121"	"8.3"	"100.000"	"84.6402"	"28988"	"28988"	"28976"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"11.4"	""	"13.4"	""	"13.1"	""	"14.8"	"16.6"	""	"698"	"29"	"35.000"	"28.000"	"0.0428376291674284"	"15"	"0.0003839"	"0.001585"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAALASVPALPGES"	"[R].lVAALASVPALPGES.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"541.98822"	"1623.95011"	"1623.95189"	"-1.10"	"-0.00059"	"6/130"	"6"	"130"	"1339728.13970947"	"HCD"	"MS2"	"27.34496"	"19.4"	"100.000"	"84.5776"	"28963"	"28963"	"28945"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.5"	""	"29.6"	""	"28.8"	""	"23.7"	""	"37.5"	"40.5"	""	"696"	"27"	"35.000"	"28.000"	"0.0650997384847298"	"15"	"0.0001308"	"0.0002265"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAALASVPALPGES"	"[R].lVAALASVPALPGES.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.47900"	"1623.95073"	"1623.95189"	"-0.71"	"-0.00058"	"7/130"	"7"	"130"	"184857.429992676"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"84.6220"	"28930"	"28930"	"28907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.9"	""	"12.7"	""	"12.0"	""	"13.9"	""	"16.7"	"15.1"	""	"684"	"34"	"35.000"	"28.000"	"0.0149632559964122"	"15"	"0.0001889"	"0.0007544"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAALASVPALPGES"	"[R].lVAALASVPALPGES.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.47906"	"1623.95085"	"1623.95189"	"-0.64"	"-0.00052"	"9/130"	"9"	"130"	"1241126.54534912"	"HCD"	"MS2"	"26.20047"	"12.7"	"100.000"	"84.3449"	"28868"	"28868"	"28849"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.9"	""	"21.0"	""	"18.9"	""	"17.4"	""	"22.0"	"24.0"	""	"685"	"63"	"35.000"	"28.000"	"1.60199285890865E-05"	"16"	"0.0001308"	"0.0002643"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAALASVPALPGES"	"[R].lVAALASVPALPGES.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"541.98853"	"1623.95102"	"1623.95189"	"-0.53"	"-0.00029"	"8/130"	"8"	"130"	"1843920.56628418"	"HCD"	"MS2"	"13.62703"	"9.1"	"100.000"	"84.2666"	"28836"	"28836"	"28817"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.2"	""	"13.1"	""	"12.5"	""	"15.5"	""	"17.3"	"18.7"	""	"707"	"47"	"35.000"	"28.000"	"0.000659765220710056"	"17"	"0"	"0.0001458"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAALASVPALPGES"	"[R].lVAALASVPALPGES.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.47943"	"1623.95159"	"1623.95189"	"-0.19"	"-0.00015"	"9/130"	"9"	"130"	"1224133.84448242"	"HCD"	"MS2"	"23.60717"	"12.2"	"100.000"	"84.3134"	"28804"	"28804"	"28785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.9"	""	"19.6"	""	"20.8"	""	"18.4"	""	"21.2"	"19.9"	""	"704"	"55"	"35.000"	"28.000"	"0.000103405267749046"	"16"	"0"	"0.0001811"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAALASVPALPGES"	"[R].lVAALASVPALPGES.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"541.98883"	"1623.95194"	"1623.95189"	"0.03"	"0.00002"	"7/130"	"7"	"130"	"1245962.70703125"	"HCD"	"MS2"	"24.8167"	"17.9"	"100.000"	"84.5344"	"28894"	"28894"	"28876"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.9"	""	"27.7"	""	"26.5"	""	"27.4"	""	"37.1"	"32.8"	""	"704"	"32"	"35.000"	"28.000"	"0.0209190839832682"	"16"	"0.0001308"	"0.0002057"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAALASVPALPGES"	"[R].lVAALASVPALPGES.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.98895"	"1623.95230"	"1623.95189"	"0.26"	"0.00014"	"7/130"	"7"	"130"	"2082378.82269287"	"HCD"	"MS2"	"10.30729"	"10.5"	"100.000"	"84.2419"	"28775"	"28775"	"28756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"14.2"	""	"13.6"	""	"17.9"	"1.7"	"19.6"	"20.5"	""	"699"	"49"	"35.000"	"28.000"	"0.00045232144658677"	"16"	"0"	"9.796E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIIIGDMGVGK"	"[K].yIIIGDMGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"812.48053"	"1623.95378"	"1623.95442"	"-0.39"	"-0.00032"	"10/80"	"10"	"80"	"2101720.73535156"	"HCD"	"MS2"	"0"	"160.8"	"100.000"	"62.6860"	"20050"	"20050"	"20019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"235.7"	""	"289.8"	""	"265.1"	""	"177.1"	"2.7"	"274.5"	"275.7"	""	"690"	"62"	"35.000"	"28.000"	"2.40890179406624E-05"	"28"	"0"	"1.062E-05"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIIIGDMGVGK"	"[K].yIIIGDMGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"541.98975"	"1623.95469"	"1623.95442"	"0.16"	"0.00009"	"8/80"	"8"	"80"	"3723219.87854004"	"HCD"	"MS2"	"13.22927"	"118.4"	"100.000"	"62.6229"	"19971"	"19971"	"19945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.5"	""	"199.6"	""	"189.3"	""	"154.4"	""	"206.4"	"212.1"	""	"648"	"46"	"35.000"	"28.000"	"0.000815727324593869"	"18"	"0"	"3.827E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIIIGDMGVGK"	"[K].yIIIGDMGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"541.99011"	"1623.95578"	"1623.95442"	"0.84"	"0.00045"	"8/80"	"8"	"80"	"3371510.72021484"	"HCD"	"MS2"	"31.48153"	"111.9"	"100.000"	"62.6836"	"20049"	"20049"	"20019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.9"	""	"184.5"	""	"178.0"	""	"140.0"	"0.1"	"188.2"	"212.8"	""	"652"	"49"	"35.000"	"28.000"	"0.000398306689213748"	"21"	"0"	"7.285E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIIIGDMGVGK"	"[K].yIIIGDMGVGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"812.48218"	"1623.95708"	"1623.95442"	"1.64"	"0.00133"	"10/80"	"10"	"80"	"1823843.87225342"	"HCD"	"MS2"	"15.83569"	"145.7"	"100.000"	"62.5723"	"19950"	"19950"	"19929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.3"	""	"246.1"	""	"244.0"	""	"156.5"	"0.7"	"258.8"	"277.1"	""	"656"	"58"	"35.000"	"28.000"	"5.30730252346926E-05"	"28"	"0"	"9.674E-06"	"1.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIGIDNLVIPGR"	"[K].dLIGIDNLVIPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.99158"	"1623.96018"	"1623.96312"	"-1.81"	"-0.00098"	"9/118"	"9"	"118"	"1074005.8583374"	"HCD"	"MS2"	"17.67338"	"22.1"	"100.000"	"71.2296"	"23529"	"23529"	"23498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.7"	""	"24.6"	""	"31.9"	""	"36.4"	"0.5"	"49.4"	"44.2"	""	"627"	"29"	"34.000"	"27.000"	"0.0429771433692681"	"14"	"0"	"0.0001268"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DRPFFSGLVK"	"[K].dRPFFSGLVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05982"	"Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"Q05982"	"Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"541.99170"	"1623.96054"	"1623.96228"	"-1.07"	"-0.00058"	"8/98"	"8"	"98"	"14303889.2562866"	"HCD"	"MS2"	"59.99623"	"573.3"	"100.000"	"45.3842"	"13012"	"13012"	"12987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"842.5"	""	"675.7"	""	"747.2"	""	"1058.3"	"5.5"	"1029.6"	"1072.2"	""	"624"	"22"	"34.000"	"27.000"	"0.20051856780291"	"15"	"7.476E-05"	"0.0001886"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIGIDNLVIPGR"	"[K].dLIGIDNLVIPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"812.48444"	"1623.96160"	"1623.96312"	"-0.94"	"-0.00076"	"10/118"	"10"	"118"	"737881.435913086"	"HCD"	"MS2"	"13.58883"	"38.9"	"100.000"	"71.2842"	"23499"	"23499"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.0"	""	"65.9"	""	"64.4"	""	"60.2"	""	"60.7"	"66.7"	""	"621"	"59"	"34.000"	"27.000"	"4.09318717321765E-05"	"24"	"0"	"2.161E-06"	"1.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIGIDNLVIPGR"	"[K].dLIGIDNLVIPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.99219"	"1623.96201"	"1623.96312"	"-0.69"	"-0.00037"	"8/118"	"8"	"118"	"1852539.47186279"	"HCD"	"MS2"	"68.66732"	"29.3"	"100.000"	"71.2543"	"23487"	"23487"	"23459"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.3"	""	"37.4"	""	"39.3"	""	"55.6"	"0.6"	"54.8"	"46.9"	""	"614"	"33"	"34.000"	"27.000"	"0.0148640916848318"	"15"	"0"	"3.359E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DRPFFSGLVK"	"[K].dRPFFSGLVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05982"	"Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"Q05982"	"Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.99243"	"1623.96274"	"1623.96228"	"0.28"	"0.00015"	"8/98"	"8"	"98"	"17430907.8365479"	"HCD"	"MS2"	"24.98674"	"735.6"	"100.000"	"45.1683"	"12875"	"12875"	"12848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1062.2"	""	"890.8"	""	"935.4"	""	"1409.0"	"4.8"	"1292.9"	"1372.9"	""	"623"	"22"	"34.000"	"27.000"	"0.209150087686434"	"14"	"0.0001308"	"0.0002671"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLPPLIIGK"	"[K].iDSLPPLIIGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.01910"	"1624.04276"	"1624.04495"	"-1.35"	"-0.00073"	"16/82"	"16"	"82"	"2230107.06732178"	"HCD"	"MS2"	"29.05115"	"70.4"	"100.000"	"73.0045"	"24202"	"24202"	"24177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.6"	""	"101.1"	""	"91.6"	""	"114.5"	"0.5"	"140.0"	"124.9"	""	"168"	"58"	"29.000"	"22.000"	"1.49031916394774E-05"	"16"	"0"	"6.004E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLPPLIIGK"	"[K].iDSLPPLIIGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.52545"	"1624.04363"	"1624.04495"	"-0.82"	"-0.00066"	"16/82"	"16"	"82"	"576985.126159668"	"HCD"	"MS2"	"41.66629"	"37.9"	"100.000"	"72.9699"	"24188"	"24188"	"24161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.1"	""	"43.5"	""	"63.2"	""	"57.3"	"1.1"	"76.8"	"69.3"	""	"158"	"38"	"28.000"	"21.000"	"0.00139838607707076"	"15"	"0.0001859"	"0.0003288"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLPPLIIGK"	"[K].iDSLPPLIIGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.01941"	"1624.04367"	"1624.04495"	"-0.79"	"-0.00043"	"13/82"	"13"	"82"	"2710886.52246094"	"HCD"	"MS2"	"34.12979"	"67.8"	"100.000"	"72.9865"	"24246"	"24246"	"24223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.9"	""	"98.2"	""	"87.2"	""	"116.9"	"0.7"	"129.4"	"128.7"	""	"158"	"48"	"28.000"	"21.000"	"0.000114981267365975"	"16"	"0"	"3.397E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLPPLIIGK"	"[K].iDSLPPLIIGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.52563"	"1624.04399"	"1624.04495"	"-0.59"	"-0.00048"	"12/82"	"12"	"82"	"356259.106994629"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"73.3161"	"24381"	"24381"	"24351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.8"	""	"31.2"	""	"37.4"	""	"35.7"	"0.2"	"47.1"	"52.4"	""	"160"	"42"	"29.000"	"22.000"	"0.000485389063670804"	"15"	"0.0001889"	"0.0007676"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLPPLIIGK"	"[K].iDSLPPLIIGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.52563"	"1624.04399"	"1624.04495"	"-0.59"	"-0.00048"	"13/82"	"13"	"82"	"750243.92175293"	"HCD"	"MS2"	"29.38456"	"44.3"	"100.000"	"72.9656"	"24238"	"24238"	"24207"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.7"	""	"62.5"	""	"61.9"	""	"67.8"	""	"91.1"	"84.5"	""	"160"	"31"	"29.000"	"22.000"	"0.00635462587779425"	"14"	"0.000523"	"0.003036"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLPPLIIGK"	"[K].iDSLPPLIIGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.01953"	"1624.04404"	"1624.04495"	"-0.56"	"-0.00030"	"15/82"	"15"	"82"	"1086188.71765137"	"HCD"	"MS2"	"7.511294"	"31.1"	"100.000"	"73.3069"	"24377"	"24377"	"24351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.8"	""	"45.2"	""	"41.8"	""	"49.4"	""	"60.0"	"61.8"	""	"168"	"53"	"29.000"	"22.000"	"4.46970937784107E-05"	"16"	"0"	"2.17E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLPPLIIGK"	"[K].iDSLPPLIIGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.02002"	"1624.04551"	"1624.04495"	"0.34"	"0.00018"	"16/82"	"16"	"82"	"1247185.87359619"	"HCD"	"MS2"	"9.834296"	"36.1"	"100.000"	"73.3161"	"24329"	"24329"	"24305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.2"	""	"47.5"	""	"52.1"	""	"52.1"	"0.1"	"75.4"	"72.6"	""	"168"	"54"	"29.000"	"22.000"	"3.00109184047621E-05"	"16"	"0"	"1.103E-05"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLPPLIIGK"	"[K].iDSLPPLIIGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.52679"	"1624.04631"	"1624.04495"	"0.84"	"0.00068"	"13/82"	"13"	"82"	"409974.485412598"	"HCD"	"MS2"	"6.799953"	"28.3"	"100.000"	"73.3184"	"24330"	"24330"	"24305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.4"	""	"44.2"	""	"41.9"	""	"38.9"	""	"55.8"	"57.2"	""	"169"	"34"	"29.000"	"22.000"	"0.00341866628484339"	"15"	"0.0001889"	"0.000836"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSQLALFSVSDK"	"[M].aSSqLALFSVSDk.[T]"	"N-Term(Prot)(Acetyl); Q4(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"812.94507"	"1624.88286"	"1624.86313"	"12.14"	"0.00986"	"14/134"	"14"	"134"	"488717.477539063"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"69.9610"	"22959"	"22959"	"22937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.2"	""	"47.5"	""	"49.9"	""	"57.0"	"1.2"	"59.6"	"61.7"	""	"935"	"30"	"36.000"	"29.000"	"0.0498633686675146"	"28"	"0.0007076"	"0.007064"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGAEVYHHLK"	"[R].iGAEVYHHLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"4"	"4"	"0.9545"	"0.0000"	"1"	"1"	"1"	"406.99448"	"1624.95608"	"1624.95753"	"-0.90"	"-0.00036"	"11/72"	"11"	"72"	"9494690.63146973"	"HCD"	"MS2"	"28.54615"	"320.1"	"100.000"	"34.2377"	"8456"	"8456"	"8436"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"520.7"	""	"303.5"	""	"300.9"	""	"263.4"	"0.3"	"322.0"	"1329.1"	""	"674"	"22"	"35.000"	"28.000"	"0.237481564241929"	"15"	"0.0001889"	"0.0004364"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGAEVYHHLK"	"[R].iGAEVYHHLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"542.32361"	"1624.95627"	"1624.95753"	"-0.78"	"-0.00042"	"9/72"	"9"	"72"	"2593743.12408447"	"HCD"	"MS2"	"19.34438"	"156.9"	"100.000"	"34.3134"	"8444"	"8444"	"8419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"225.1"	""	"205.7"	""	"226.7"	""	"199.7"	""	"286.5"	"348.7"	""	"674"	"3"	"35.000"	"28.000"	"17.4032316444688"	"14"	"0.00119"	"0.01628"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGAEVYHHLK"	"[R].iGAEVYHHLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"4"	"4"	"0.6875"	"0.0000"	"1"	"1"	"1"	"406.99472"	"1624.95705"	"1624.95753"	"-0.30"	"-0.00012"	"7/72"	"7"	"72"	"13163046.7867432"	"HCD"	"MS2"	"45.01698"	"452.5"	"100.000"	"34.2376"	"8413"	"8413"	"8389"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"693.3"	""	"449.0"	""	"462.3"	""	"417.4"	"13.1"	"462.5"	"1799.4"	""	"666"	"16"	"35.000"	"28.000"	"0.923515594849062"	"18"	"0.0001889"	"0.0008555"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKFEDLAK"	"[K].skFEDLAk.[S]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52925"	"High mobility group protein B2 OS=Rattus norvegicus OX=10116 GN=Hmgb2 PE=2 SV=2"	"P52925"	"High mobility group protein B2 OS=Rattus norvegicus OX=10116 GN=Hmgb2 PE=2 SV=2"	"1"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"542.33398"	"1624.98740"	"1624.98772"	"-0.20"	"-0.00011"	"6/76"	"6"	"76"	"10332310.8358154"	"HCD"	"MS2"	"13.92326"	"654.5"	"100.000"	"36.8155"	"9470"	"9470"	"9450"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1134.4"	""	"954.4"	""	"1014.1"	""	"1111.6"	""	"1028.4"	"943.2"	""	"377"	"18"	"32.000"	"25.000"	"0.312112638114006"	"19"	"0.0001889"	"0.0006501"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPFDFTWK"	"[R].nLPFDFTWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.45715"	"1625.90703"	"1625.90919"	"-1.33"	"-0.00108"	"6/84"	"6"	"84"	"1304470.16137695"	"HCD"	"MS2"	"27.00047"	"61.7"	"100.000"	"74.8637"	"25012"	"25012"	"24991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.4"	""	"66.3"	""	"86.2"	""	"121.9"	""	"133.6"	"119.1"	""	"921"	"18"	"36.000"	"29.000"	"0.700212137441814"	"14"	"0.001217"	"0.01639"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPFDFTWK"	"[R].nLPFDFTWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"813.45734"	"1625.90740"	"1625.90919"	"-1.10"	"-0.00089"	"8/84"	"8"	"84"	"1750174.62225342"	"HCD"	"MS2"	"0"	"136.4"	"100.000"	"74.5523"	"24885"	"24885"	"24863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.8"	""	"171.6"	""	"151.9"	""	"260.6"	""	"280.4"	"266.3"	""	"920"	"52"	"36.000"	"29.000"	"0.000321186905875498"	"21"	"0"	"6.149E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPFDFTWK"	"[R].nLPFDFTWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"542.64087"	"1625.90805"	"1625.90919"	"-0.70"	"-0.00038"	"7/84"	"7"	"84"	"2855730.40966797"	"HCD"	"MS2"	"22.3099"	"86.3"	"100.000"	"74.5961"	"24903"	"24903"	"24879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.4"	""	"106.3"	""	"108.2"	""	"143.8"	"0.6"	"172.5"	"175.7"	""	"907"	"29"	"36.000"	"29.000"	"0.0627447352863703"	"22"	"0.0001889"	"0.0003939"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYNELTEILVR"	"[K].fYNELTEILVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.45770"	"1625.90813"	"1625.91002"	"-1.17"	"-0.00095"	"9/102"	"9"	"102"	"582336.997741699"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"78.3448"	"26421"	"26421"	"26399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.1"	""	"48.3"	""	"56.7"	""	"63.5"	""	"64.4"	"69.3"	""	"907"	"65"	"36.000"	"29.000"	"1.39500990548491E-05"	"17"	"0"	"5.908E-06"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPFDFTWK"	"[R].nLPFDFTWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"813.45789"	"1625.90849"	"1625.90919"	"-0.42"	"-0.00035"	"8/84"	"8"	"84"	"1686464.03820801"	"HCD"	"MS2"	"8.325263"	"139.2"	"100.000"	"74.5527"	"24834"	"24834"	"24817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.6"	""	"170.5"	""	"147.9"	""	"296.5"	"0.1"	"280.1"	"263.6"	""	"898"	"52"	"36.000"	"29.000"	"0.00028989874883656"	"23"	"0"	"4.677E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYNELTEILVR"	"[K].fYNELTEILVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.45868"	"1625.91008"	"1625.91002"	"0.04"	"0.00003"	"7/102"	"7"	"102"	"242155.981445313"	"HCD"	"MS2"	"6.048925"	"16.5"	"100.000"	"78.6778"	"26506"	"26506"	"26481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.9"	""	"20.4"	""	"31.8"	""	"24.5"	""	"30.1"	"29.1"	""	"902"	"22"	"36.000"	"29.000"	"0.26926291424931"	"14"	"0.0001889"	"0.0009333"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYNELTEILVR"	"[K].fYNELTEILVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.45886"	"1625.91045"	"1625.91002"	"0.26"	"0.00021"	"8/102"	"8"	"102"	"452062.299499512"	"HCD"	"MS2"	"21.41947"	"31.3"	"100.000"	"78.3616"	"26377"	"26377"	"26353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.1"	""	"43.4"	""	"46.8"	""	"56.5"	""	"52.9"	"60.4"	""	"902"	"54"	"36.000"	"29.000"	"0.000181625382480782"	"16"	"0"	"8.75E-06"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATQLTGPVMPIR"	"[K].lATQLTGPVMPIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"542.65790"	"1625.95914"	"1625.96101"	"-1.15"	"-0.00062"	"8/120"	"8"	"120"	"4626156.67425537"	"HCD"	"MS2"	"0"	"44.4"	"100.000"	"55.9340"	"17297"	"17297"	"17269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.1"	""	"68.7"	""	"78.8"	""	"60.8"	"2.1"	"74.8"	"65.0"	""	"575"	"66"	"34.000"	"27.000"	"6.9444498990292E-06"	""	"0"	"3.283E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATQLTGPVMPIR"	"[K].lATQLTGPVMPIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.9559"	"0.0000"	"1"	"1"	"1"	"813.48340"	"1625.95952"	"1625.96101"	"-0.92"	"-0.00075"	"10/120"	"10"	"120"	"2677394.25787354"	"HCD"	"MS2"	"8.162004"	"131.0"	"100.000"	"56.1087"	"17368"	"17368"	"17349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"230.0"	""	"225.5"	""	"209.9"	""	"166.0"	""	"211.3"	"194.9"	""	"574"	"68"	"34.000"	"27.000"	"4.46562136270657E-06"	"20"	"0"	"7.357E-06"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATQLTGPVMPIR"	"[K].lATQLTGPVMPIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"542.65814"	"1625.95987"	"1625.96101"	"-0.70"	"-0.00038"	"9/120"	"9"	"120"	"2033098.86627197"	"HCD"	"MS2"	"55.41316"	"98.7"	"100.000"	"56.0479"	"17290"	"17290"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.8"	""	"142.5"	""	"155.8"	""	"155.4"	""	"175.7"	"171.0"	""	"571"	"8"	"34.000"	"27.000"	"4.18413908592913"	"18"	"0.0001889"	"0.0003913"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATQLTGPVMPIR"	"[K].lATQLTGPVMPIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"3"	"3"	"0.8525"	"0.0000"	"1"	"1"	"1"	"542.65839"	"1625.96061"	"1625.96101"	"-0.25"	"-0.00014"	"15/120"	"15"	"120"	"4057631.51904297"	"HCD"	"MS2"	"8.003406"	"43.7"	"100.000"	"55.7185"	"17155"	"17155"	"17131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.8"	""	"65.1"	""	"71.3"	""	"63.5"	"0.3"	"70.7"	"77.5"	""	"570"	"61"	"34.000"	"27.000"	"2.28478248065489E-05"	"25"	"0"	"1.389E-05"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATQLTGPVMPIR"	"[K].lATQLTGPVMPIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.9844"	"0.0000"	"1"	"1"	"1"	"813.48444"	"1625.96160"	"1625.96101"	"0.36"	"0.00029"	"9/120"	"9"	"120"	"2617948.37017822"	"HCD"	"MS2"	"14.62068"	"132.9"	"100.000"	"55.9074"	"17232"	"17232"	"17211"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.0"	""	"216.0"	""	"237.9"	""	"160.2"	"1.1"	"198.9"	"199.8"	""	"558"	"64"	"34.000"	"27.000"	"1.10307286999008E-05"	"17"	"0"	"6.376E-06"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNKPWISLPR"	"[K].gNkPWISLPR.[G]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.66754"	"1625.98807"	"1625.98917"	"-0.67"	"-0.00037"	"7/88"	"7"	"88"	"27423916.4854736"	"HCD"	"MS2"	"24.23141"	"474.5"	"29.864"	"40.8278"	"11113"	"11113"	"11093"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"647.5"	""	"643.6"	""	"673.4"	""	"774.9"	""	"893.8"	"864.0"	""	"393"	"7"	"32.000"	"25.000"	"3.61711698288649"	"13"	"0.0001889"	"0.0006796"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNKPWISLPR"	"[K].gNkPWISLPR.[G]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.66754"	"1625.98807"	"1625.98917"	"-0.67"	"-0.00037"	"8/88"	"8"	"88"	"28616714.395752"	"HCD"	"MS2"	"17.38531"	"583.3"	"41.144"	"40.9695"	"11215"	"11215"	"11197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"840.3"	""	"804.8"	""	"900.7"	""	"935.9"	""	"1083.5"	"959.5"	""	"393"	"11"	"32.000"	"25.000"	"1.71934311832191"	"13"	"0.0001859"	"0.0003598"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAHLGTALK"	"[K].kAHLGTALk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.69336"	"1626.06552"	"1626.06697"	"-0.89"	"-0.00048"	"8/80"	"8"	"80"	"3124510.06488037"	"HCD"	"MS2"	"19.7621"	"213.9"	"100.000"	"28.3965"	"6113"	"6113"	"6086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"334.5"	""	"336.9"	""	"369.7"	""	"320.6"	""	"333.9"	"327.3"	""	"89"	"10"	"26.000"	"19.000"	"0.467046380750283"	"13"	"0.0001889"	"0.000402"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNDFISYLQR"	"[R].eLNDFISYLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"542.96051"	"1626.86698"	"1626.86889"	"-1.17"	"-0.00064"	"12/108"	"12"	"108"	"4035224.88970947"	"HCD"	"MS2"	"24.50631"	"50.9"	"100.000"	"71.8939"	"23748"	"23748"	"23731"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.1"	""	"66.8"	""	"65.0"	""	"79.6"	"0.2"	"103.1"	"95.0"	""	"974"	"49"	"36.000"	"29.000"	"0.000666083938065179"	"19"	"0"	"7.191E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNDFISYLQR"	"[R].eLNDFISYLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9254"	"0.0000"	"1"	"1"	"1"	"813.93719"	"1626.86711"	"1626.86889"	"-1.09"	"-0.00089"	"9/108"	"9"	"108"	"863989.029602051"	"HCD"	"MS2"	"0"	"52.1"	"100.000"	"72.0156"	"23798"	"23798"	"23777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.4"	""	"61.5"	""	"66.5"	""	"95.5"	"1.6"	"96.0"	"94.9"	""	"982"	"67"	"36.000"	"29.000"	"1.01878253707036E-05"	"21"	"0"	"6.681E-06"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNDFISYLQR"	"[R].eLNDFISYLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"542.96082"	"1626.86789"	"1626.86889"	"-0.61"	"-0.00033"	"11/108"	"11"	"108"	"3236851.43902588"	"HCD"	"MS2"	"13.9213"	"42.7"	"100.000"	"71.8508"	"23782"	"23782"	"23769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.4"	""	"51.2"	""	"57.6"	""	"72.6"	"0.5"	"80.4"	"77.7"	""	"984"	"44"	"36.000"	"29.000"	"0.00203687840011307"	"22"	"7.476E-05"	"0.0001988"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNDFISYLQR"	"[R].eLNDFISYLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"813.93768"	"1626.86809"	"1626.86889"	"-0.49"	"-0.00040"	"8/108"	"8"	"108"	"1067088.46685791"	"HCD"	"MS2"	"0"	"63.4"	"100.000"	"71.9196"	"23810"	"23810"	"23793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.6"	""	"75.8"	""	"82.5"	""	"105.6"	"0.8"	"115.2"	"117.1"	""	"983"	"52"	"36.000"	"29.000"	"0.000326981756273156"	"21"	"0"	"8.148E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNDFISYLQR"	"[R].eLNDFISYLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"813.93823"	"1626.86919"	"1626.86889"	"0.18"	"0.00015"	"8/108"	"8"	"108"	"2605005.93261719"	"HCD"	"MS2"	"24.36237"	"160.0"	"100.000"	"71.7082"	"23672"	"23672"	"23651"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.7"	""	"200.2"	""	"206.0"	""	"274.1"	"3.7"	"300.0"	"294.7"	""	"972"	"50"	"36.000"	"29.000"	"0.000438163572876495"	"21"	"0"	"2.429E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNDFISYLQR"	"[R].eLNDFISYLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"813.93842"	"1626.86955"	"1626.86889"	"0.41"	"0.00033"	"9/108"	"9"	"108"	"2299889.34899902"	"HCD"	"MS2"	"48.5697"	"142.3"	"100.000"	"71.6052"	"23682"	"23682"	"23658"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.8"	""	"182.4"	""	"191.4"	""	"265.9"	"1.4"	"258.3"	"261.8"	""	"971"	"58"	"36.000"	"29.000"	"7.55421314144264E-05"	"25"	"0"	"1.749E-05"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSWTPLLLGNPGR"	"[K].sSWTPLLLGNPGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"542.97614"	"1626.91385"	"1626.91651"	"-1.63"	"-0.00088"	"14/108"	"14"	"108"	"4617190.36993408"	"HCD"	"MS2"	"48.08685"	"44.5"	"100.000"	"60.2093"	"19039"	"19039"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.5"	""	"65.8"	""	"58.7"	""	"77.8"	""	"77.9"	"91.3"	""	"832"	"50"	"36.000"	"29.000"	"0.000415043226550182"	"20"	"0"	"2.853E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSWTPLLLGNPGR"	"[K].sSWTPLLLGNPGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"813.96075"	"1626.91423"	"1626.91651"	"-1.40"	"-0.00114"	"11/108"	"11"	"108"	"4040647.35705566"	"HCD"	"MS2"	"0"	"157.7"	"100.000"	"60.1912"	"19031"	"19031"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.4"	""	"241.5"	""	"208.5"	""	"257.1"	"0.7"	"288.2"	"311.0"	""	"845"	"49"	"36.000"	"29.000"	"0.000492977063208256"	"18"	"0"	"6.333E-06"	"1.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSWTPLLLGNPGR"	"[K].sSWTPLLLGNPGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"813.96155"	"1626.91582"	"1626.91651"	"-0.42"	"-0.00034"	"11/108"	"11"	"108"	"1636974.25531006"	"HCD"	"MS2"	"0"	"87.5"	"100.000"	"60.3370"	"19037"	"19037"	"19017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.2"	""	"117.4"	""	"118.7"	""	"140.5"	"2.6"	"172.9"	"170.6"	""	"849"	"40"	"36.000"	"29.000"	"0.00474108448682848"	"19"	"7.476E-05"	"0.0001926"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSWTPLLLGNPGR"	"[K].sSWTPLLLGNPGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"542.97687"	"1626.91605"	"1626.91651"	"-0.28"	"-0.00015"	"11/108"	"11"	"108"	"1442630.35137939"	"HCD"	"MS2"	"11.65211"	"35.2"	"100.000"	"60.5139"	"19163"	"19163"	"19139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.8"	""	"39.4"	""	"43.1"	""	"66.8"	""	"71.0"	"70.7"	""	"838"	"26"	"36.000"	"29.000"	"0.117818644793716"	"20"	"0"	"0.0001187"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSWTPLLLGNPGR"	"[K].sSWTPLLLGNPGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"542.97699"	"1626.91642"	"1626.91651"	"-0.06"	"-0.00003"	"14/108"	"14"	"108"	"1287714.09020996"	"HCD"	"MS2"	"14.65629"	"37.6"	"100.000"	"60.3920"	"19060"	"19060"	"19033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.6"	""	"43.9"	""	"55.8"	""	"71.0"	""	"71.4"	"74.0"	""	"869"	"23"	"36.000"	"29.000"	"0.212319450134461"	"15"	"0"	"0.0001407"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSWTPLLLGNPGR"	"[K].sSWTPLLLGNPGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9074"	"0.0000"	"1"	"1"	"1"	"542.97699"	"1626.91642"	"1626.91651"	"-0.06"	"-0.00003"	"15/108"	"15"	"108"	"4874095.39880371"	"HCD"	"MS2"	"7.020393"	"45.2"	"100.000"	"60.0807"	"18933"	"18933"	"18905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.6"	""	"59.5"	""	"59.0"	""	"80.8"	""	"87.4"	"85.4"	""	"869"	"54"	"36.000"	"29.000"	"0.000190980831907735"	"21"	"0"	"5.023E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSWTPLLLGNPGR"	"[K].sSWTPLLLGNPGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"813.96204"	"1626.91680"	"1626.91651"	"0.18"	"0.00014"	"12/108"	"12"	"108"	"1374690.78405762"	"HCD"	"MS2"	"0"	"72.2"	"100.000"	"60.4999"	"19157"	"19157"	"19139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.8"	""	"104.6"	""	"115.1"	""	"111.6"	""	"130.3"	"141.6"	""	"873"	"53"	"36.000"	"29.000"	"0.000219272540326522"	"17"	"0"	"4.091E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSWTPLLLGNPGR"	"[K].sSWTPLLLGNPGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"813.96228"	"1626.91728"	"1626.91651"	"0.48"	"0.00039"	"17/108"	"17"	"108"	"3358470.93780518"	"HCD"	"MS2"	"0"	"147.5"	"100.000"	"60.0277"	"18911"	"18911"	"18889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.1"	""	"218.6"	""	"211.7"	""	"252.9"	""	"269.4"	"271.2"	""	"868"	"50"	"36.000"	"29.000"	"0.000407839916785053"	"16"	"0"	"4.267E-06"	"1.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLYDIAEGK"	"[K].lFLYDIAEGk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"O54874"	"Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"813.97809"	"1626.94890"	"1626.95072"	"-1.12"	"-0.00091"	"8/78"	"8"	"78"	"673258.571655273"	"HCD"	"MS2"	"0"	"57.2"	"100.000"	"71.5675"	"23615"	"23615"	"23587"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.9"	""	"79.0"	""	"81.3"	""	"99.0"	"2.7"	"111.5"	"100.3"	""	"680"	"20"	"35.000"	"28.000"	"0.374523365244081"	"18"	"0.000523"	"0.003044"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIEFYK"	"[K].lDQLIEFYk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97573"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Inpp5d PE=1 SV=1"	"P97573"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Inpp5d PE=1 SV=1"	"0"	"2"	"2"	"0.4571"	"0.0000"	"1"	"1"	"1"	"813.97888"	"1626.95049"	"1626.95072"	"-0.14"	"-0.00011"	"7/84"	"7"	"84"	"312237.953308105"	"HCD"	"MS2"	"34.30358"	"31.2"	"100.000"	"77.5916"	"26114"	"26114"	"26085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.6"	""	"37.4"	""	"49.0"	""	"51.9"	""	"54.9"	"54.4"	""	"630"	"35"	"34.000"	"27.000"	"0.00914767136156302"	""	"0.0001308"	"0.0002193"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIEFYK"	"[K].lDQLIEFYk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97573"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Inpp5d PE=1 SV=1"	"P97573"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Inpp5d PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"813.97974"	"1626.95220"	"1626.95072"	"0.91"	"0.00074"	"12/84"	"12"	"84"	"327921.870483398"	"HCD"	"MS2"	"41.97958"	"31.7"	"100.000"	"77.5627"	"26051"	"26051"	"26025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.4"	""	"34.8"	""	"39.8"	""	"54.5"	""	"62.6"	"61.9"	""	"631"	"29"	"34.000"	"28.000"	"0.0433510243116449"	"24"	"0.0001308"	"0.0002533"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTAPVWAAK"	"[R].lDPTAPVWAAk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"542.99188"	"1626.96109"	"1626.96195"	"-0.53"	"-0.00029"	"10/84"	"10"	"84"	"4529616.55636597"	"HCD"	"MS2"	"23.9218"	"136.6"	"100.000"	"55.4576"	"17102"	"17102"	"17077"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.4"	""	"184.3"	""	"186.6"	""	"227.4"	""	"266.8"	"272.4"	""	"574"	"30"	"34.000"	"27.000"	"0.0287661603328358"	"15"	"0"	"0.0001653"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTAPVWAAK"	"[R].lDPTAPVWAAk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.99194"	"1626.96128"	"1626.96195"	"-0.41"	"-0.00022"	"10/84"	"10"	"84"	"4413570.60479736"	"HCD"	"MS2"	"14.35115"	"155.8"	"100.000"	"55.2194"	"16951"	"16951"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.1"	""	"231.7"	""	"207.2"	""	"263.3"	""	"295.1"	"300.4"	""	"574"	"29"	"34.000"	"27.000"	"0.0398916405158233"	"15"	"0.0001889"	"0.0004003"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTAPVWAAK"	"[R].lDPTAPVWAAk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"813.98535"	"1626.96343"	"1626.96195"	"0.91"	"0.00074"	"9/84"	"9"	"84"	"1587282.25799561"	"HCD"	"MS2"	"0"	"120.1"	"100.000"	"55.4163"	"17085"	"17085"	"17061"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"172.3"	""	"165.1"	""	"159.1"	""	"176.8"	"0.7"	"226.2"	"238.2"	""	"570"	"62"	"34.000"	"27.000"	"1.64757373510629E-05"	"23"	"0"	"7.994E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTAPVWAAK"	"[R].lDPTAPVWAAk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"2"	"2"	"0.9365"	"0.0000"	"1"	"1"	"1"	"813.98572"	"1626.96416"	"1626.96195"	"1.36"	"0.00110"	"9/84"	"9"	"84"	"1655396.20526123"	"HCD"	"MS2"	"0"	"124.0"	"100.000"	"55.2240"	"16953"	"16953"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.8"	""	"177.2"	""	"151.5"	""	"193.4"	"0.8"	"222.9"	"247.4"	""	"564"	"63"	"34.000"	"27.000"	"1.47995703790436E-05"	"21"	"0"	"9.194E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPDVIFVFGFR"	"[K].tTPDVIFVFGFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"543.30536"	"1627.90152"	"1627.90454"	"-1.86"	"-0.00101"	"12/94"	"12"	"94"	"789057.625671387"	"HCD"	"MS2"	"5.666615"	"12.1"	"100.000"	"80.2348"	"27192"	"27192"	"27167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.0"	""	"18.3"	""	"18.1"	""	"20.0"	""	"17.1"	"23.4"	""	"930"	"33"	"36.000"	"29.000"	"0.0234667503367041"	"19"	"7.476E-05"	"0.0001951"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPDVIFVFGFR"	"[K].tTPDVIFVFGFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"814.45557"	"1627.90386"	"1627.90454"	"-0.42"	"-0.00034"	"5/94"	"5"	"94"	"210057.926269531"	"HCD"	"MS2"	"10.10435"	"18.8"	"100.000"	"80.5125"	"27254"	"27254"	"27233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.2"	""	"33.4"	""	"32.4"	""	"29.7"	""	"31.0"	"32.1"	""	"937"	"14"	"36.000"	"29.000"	"2.07830649681876"	"15"	"0.00162"	"0.02228"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPDVIFVFGFR"	"[K].tTPDVIFVFGFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"814.45557"	"1627.90386"	"1627.90454"	"-0.42"	"-0.00034"	"6/94"	"6"	"94"	"511259.303527832"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"80.1564"	"27160"	"27160"	"27135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.9"	""	"54.1"	""	"61.9"	""	"53.0"	""	"51.5"	"71.1"	""	"937"	"28"	"36.000"	"29.000"	"0.0663299385909893"	"14"	"0.0001889"	"0.0006519"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPDVIFVFGFR"	"[K].tTPDVIFVFGFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"814.45593"	"1627.90459"	"1627.90454"	"0.03"	"0.00002"	"10/94"	"10"	"94"	"567384.933837891"	"HCD"	"MS2"	"0"	"41.6"	"100.000"	"80.2033"	"27128"	"27128"	"27105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.6"	""	"64.1"	""	"65.1"	""	"70.0"	""	"74.1"	"70.2"	""	"939"	"20"	"36.000"	"29.000"	"0.455654429621757"	"18"	"0.0004557"	"0.0026"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPDVIFVFGFR"	"[K].tTPDVIFVFGFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"814.45599"	"1627.90471"	"1627.90454"	"0.10"	"0.00008"	"8/94"	"8"	"94"	"305522.565979004"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"80.4589"	"27283"	"27283"	"27263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.9"	""	"31.7"	""	"34.2"	"2.0"	"37.5"	"0.6"	"37.8"	"36.8"	""	"939"	"48"	"36.000"	"29.000"	"0.000702482640536336"	"27"	"0"	"0.0001475"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPDVIFVFGFR"	"[K].tTPDVIFVFGFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"543.30682"	"1627.90592"	"1627.90454"	"0.84"	"0.00046"	"12/94"	"12"	"94"	"635484.442260742"	"HCD"	"MS2"	"8.639814"	"10.6"	"100.000"	"80.2193"	"27135"	"27135"	"27105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"15.3"	""	"13.6"	""	"21.3"	""	"20.9"	"20.3"	""	"951"	"33"	"36.000"	"29.000"	"0.0251275717219098"	"19"	"0"	"0.0001803"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWEFVSAFR"	"[R].kWEFVSAFR.[Q]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"2"	"Q5QE80; Q9Z0U5"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1;Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"Q5QE80; Q9Z0U5"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.31696"	"1627.93631"	"1627.93607"	"0.15"	"0.00008"	"7/86"	"7"	"86"	"6710267.59283447"	"HCD"	"MS2"	"43.25827"	"276.5"	"100.000"	"51.3385"	"15435"	"15435"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"406.5"	""	"392.9"	""	"414.9"	""	"409.4"	"1.2"	"497.2"	"496.3"	""	"757"	"4"	"35.000"	"28.000"	"14.4233414154543"	"13"	"0.0003839"	"0.001982"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWEFVSAFR"	"[R].kWEFVSAFR.[Q]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"2"	"Q5QE80; Q9Z0U5"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1;Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"Q5QE80; Q9Z0U5"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.31726"	"1627.93723"	"1627.93607"	"0.71"	"0.00039"	"7/86"	"7"	"86"	"6458147.45318604"	"HCD"	"MS2"	"52.8257"	"260.5"	"100.000"	"51.1062"	"15290"	"15290"	"15266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"405.1"	""	"375.4"	""	"387.4"	""	"380.5"	""	"449.4"	"468.1"	""	"785"	"4"	"35.000"	"28.000"	"15.234901865133"	"13"	"0.0003839"	"0.001778"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAQEVLTHLK"	"[R].mAQEVLTHLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"543.32495"	"1627.96030"	"1627.96057"	"-0.17"	"-0.00009"	"12/92"	"12"	"92"	"11211963.7491455"	"HCD"	"MS2"	"8.372626"	"354.0"	"100.000"	"46.8056"	"13588"	"13588"	"13570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"569.9"	""	"520.5"	""	"547.8"	""	"401.5"	"3.0"	"659.0"	"650.6"	""	"681"	"43"	"35.000"	"28.000"	"0.00171441957292282"	"26"	"0"	"2.26E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAQEVLTHLK"	"[R].mAQEVLTHLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"543.32513"	"1627.96085"	"1627.96057"	"0.17"	"0.00009"	"12/92"	"12"	"92"	"7919331.71490479"	"HCD"	"MS2"	"10.64657"	"292.9"	"100.000"	"46.5943"	"13454"	"13454"	"13432"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"431.6"	""	"435.5"	""	"426.0"	""	"388.8"	"5.5"	"548.4"	"538.5"	""	"664"	"42"	"35.000"	"28.000"	"0.00221379847378923"	"24"	"0"	"5.185E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSLQLQPDK"	"[K].lQSLQLQPDk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"543.33057"	"1627.97715"	"1627.97833"	"-0.73"	"-0.00039"	"11/100"	"11"	"100"	"4197899.69598389"	"HCD"	"MS2"	"0"	"158.8"	"100.000"	"46.2179"	"13300"	"13300"	"13272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.3"	""	"206.7"	""	"216.6"	""	"270.7"	""	"293.0"	"296.2"	""	"569"	"41"	"34.000"	"27.000"	"0.00218314343723438"	"18"	"0"	"0.0001681"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEEAIPLALK"	"[K].wEEAIPLALk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.7959"	"0.0000"	"1"	"1"	"1"	"543.33142"	"1627.97971"	"1627.98235"	"-1.62"	"-0.00088"	"12/74"	"12"	"74"	"4865970.73693848"	"HCD"	"MS2"	"8.936973"	"96.2"	"100.000"	"70.9302"	"23406"	"23406"	"23386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.3"	""	"125.7"	""	"144.5"	""	"158.9"	""	"168.2"	"177.3"	""	"547"	"49"	"34.000"	"27.000"	"0.000351525901494579"	"26"	"0"	"0.0001771"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEEAIPLALK"	"[K].wEEAIPLALk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"814.49384"	"1627.98039"	"1627.98235"	"-1.20"	"-0.00098"	"9/74"	"9"	"74"	"2103722.29431152"	"HCD"	"MS2"	"9.205803"	"133.4"	"100.000"	"70.9275"	"23405"	"23405"	"23386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.5"	""	"173.1"	""	"183.0"	""	"216.8"	""	"219.5"	"246.9"	""	"544"	"50"	"34.000"	"27.000"	"0.000254430343368134"	""	"0"	"2.36E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEEAIPLALK"	"[K].wEEAIPLALk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"543.33179"	"1627.98081"	"1627.98235"	"-0.95"	"-0.00051"	"11/74"	"11"	"74"	"5026367.33288574"	"HCD"	"MS2"	"22.58155"	"107.0"	"100.000"	"70.6941"	"23258"	"23258"	"23235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.5"	""	"141.3"	""	"138.9"	""	"208.0"	"0.9"	"180.0"	"179.9"	""	"523"	"45"	"34.000"	"27.000"	"0.000823136184137493"	"26"	"0.0001308"	"0.0002373"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEEAIPLALK"	"[K].wEEAIPLALk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"543.33203"	"1627.98154"	"1627.98235"	"-0.50"	"-0.00027"	"12/74"	"12"	"74"	"5604188.32861328"	"HCD"	"MS2"	"7.211289"	"116.4"	"100.000"	"70.9915"	"23380"	"23380"	"23363"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.5"	""	"153.7"	""	"156.8"	""	"188.0"	"0.3"	"200.3"	"218.2"	""	"521"	"45"	"34.000"	"27.000"	"0.000790328653482608"	"24"	"0"	"0.0001578"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEEAIPLALK"	"[K].wEEAIPLALk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"814.49481"	"1627.98235"	"1627.98235"	"0.00"	"0.00000"	"14/74"	"14"	"74"	"1464798.51794434"	"HCD"	"MS2"	"10.15568"	"105.8"	"100.000"	"71.0402"	"23399"	"23399"	"23379"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.5"	""	"142.4"	""	"142.7"	""	"166.9"	""	"183.2"	"191.7"	""	"531"	"40"	"34.000"	"27.000"	"0.0027168428945054"	"23"	"0"	"5.689E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEEAIPLALK"	"[K].wEEAIPLALk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"814.49481"	"1627.98235"	"1627.98235"	"0.00"	"0.00000"	"7/74"	"7"	"74"	"3087103.86968994"	"HCD"	"MS2"	"30.05165"	"196.7"	"100.000"	"70.6326"	"23285"	"23285"	"23258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.6"	""	"281.1"	""	"249.5"	""	"331.7"	"0.4"	"311.3"	"342.8"	""	"531"	"54"	"34.000"	"27.000"	"0.000114304815085549"	""	"0"	"3.943E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEEAIPLALK"	"[K].wEEAIPLALk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"814.49487"	"1627.98247"	"1627.98235"	"0.07"	"0.00006"	"9/74"	"9"	"74"	"3253821.51049805"	"HCD"	"MS2"	"17.91957"	"209.3"	"100.000"	"70.7239"	"23270"	"23270"	"23251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.8"	""	"298.7"	""	"295.2"	""	"352.4"	""	"329.1"	"360.8"	""	"531"	"46"	"34.000"	"27.000"	"0.000616686619432812"	""	"0"	"3.275E-05"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEEAIPLALK"	"[K].wEEAIPLALk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"543.33258"	"1627.98319"	"1627.98235"	"0.51"	"0.00028"	"11/74"	"11"	"74"	"4271066.08666992"	"HCD"	"MS2"	"34.92724"	"97.0"	"100.000"	"70.6026"	"23273"	"23273"	"23242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.3"	""	"126.4"	""	"115.1"	""	"181.3"	""	"182.5"	"170.2"	""	"531"	"28"	"34.000"	"27.000"	"0.0467804640322288"	"17"	"0.0003839"	"0.001604"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWLPELVER"	"[K].kWLPELVER.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.33557"	"1627.99216"	"1627.99358"	"-0.87"	"-0.00047"	"7/86"	"7"	"86"	"8520015.36999512"	"HCD"	"MS2"	"2.871324"	"290.9"	"100.000"	"48.8832"	"14438"	"14438"	"14415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"505.6"	""	"421.9"	""	"424.1"	""	"446.7"	""	"451.2"	"500.6"	""	"454"	"20"	"33.000"	"26.000"	"0.206075260350448"	"14"	"0.0001308"	"0.0002144"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVDFALIHK"	"[R].lNVDFALIHk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P60892"	"Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"P60892"	"Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"0"	"3"	"3"	"0.8163"	"0.0000"	"1"	"1"	"1"	"543.33575"	"1627.99271"	"1627.99358"	"-0.54"	"-0.00029"	"8/88"	"8"	"88"	"5929070.00750732"	"HCD"	"MS2"	"17.80014"	"166.7"	"100.000"	"57.3344"	"17869"	"17869"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.8"	""	"222.4"	""	"225.4"	""	"282.4"	""	"310.7"	"315.6"	""	"460"	"49"	"33.000"	"26.000"	"0.000301805976774417"	"25"	"0"	"1.207E-05"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWLPELVER"	"[K].kWLPELVER.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.33588"	"1627.99308"	"1627.99358"	"-0.31"	"-0.00017"	"7/86"	"7"	"86"	"8118692.17932129"	"HCD"	"MS2"	"5.538945"	"290.3"	"100.000"	"48.6475"	"14294"	"14294"	"14271"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"489.0"	""	"459.2"	""	"422.6"	""	"432.7"	"0.4"	"435.3"	"503.6"	""	"455"	"22"	"33.000"	"26.000"	"0.12971237194387"	"14"	"0"	"0.0001545"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVDFALIHK"	"[R].lNVDFALIHk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P60892"	"Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"P60892"	"Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus OX=10116 GN=Prps1 PE=1 SV=2"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"543.33594"	"1627.99326"	"1627.99358"	"-0.20"	"-0.00011"	"8/88"	"8"	"88"	"5252509.55505371"	"HCD"	"MS2"	"36.74776"	"161.0"	"100.000"	"57.1007"	"17720"	"17720"	"17691"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.1"	""	"215.9"	""	"221.5"	""	"274.1"	""	"285.9"	"310.1"	""	"452"	"50"	"33.000"	"26.000"	"0.000213357758040619"	"25"	"0"	"6.772E-06"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQLAYHPLK"	"[K].lSQLAYHPLk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"3"	"3"	"0.4815"	"0.0000"	"1"	"1"	"1"	"543.33691"	"1627.99619"	"1627.99358"	"1.60"	"0.00087"	"9/86"	"9"	"86"	"35473485.0690918"	"HCD"	"MS2"	"7.498248"	"429.8"	"26.908"	"41.0179"	"11191"	"11191"	"11173"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"635.5"	""	"594.3"	""	"648.2"	""	"619.1"	""	"757.1"	"820.8"	""	"449"	"27"	"33.000"	"26.000"	"0.0444852817293245"	""	"0.0001889"	"0.0007462"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQLAYHPLK"	"[K].lSQLAYHPLk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"543.33716"	"1627.99692"	"1627.99358"	"2.05"	"0.00111"	"7/86"	"7"	"86"	"51203565.7548828"	"HCD"	"MS2"	"11.31854"	"589.9"	"32.277"	"41.1600"	"11294"	"11294"	"11277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"835.8"	""	"845.6"	""	"903.9"	""	"898.2"	""	"1033.4"	"1069.7"	""	"448"	"35"	"33.000"	"26.000"	"0.00650501074600037"	""	"0.0001308"	"0.0003006"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"543.35071"	"1628.03757"	"1628.03987"	"-1.41"	"-0.00076"	"7/80"	"7"	"80"	"1158486.96539307"	"HCD"	"MS2"	"10.49325"	"33.2"	"100.000"	"83.2762"	"28432"	"28432"	"28413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.6"	""	"43.0"	""	"42.0"	""	"46.6"	""	"68.7"	"82.6"	""	"214"	"35"	"30.000"	"23.000"	"0.00339143718545653"	"23"	"0.0001889"	"0.0008907"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.7963"	"0.0000"	"1"	"1"	"1"	"543.35089"	"1628.03812"	"1628.03987"	"-1.07"	"-0.00058"	"8/80"	"8"	"80"	"3185484.63061523"	"HCD"	"MS2"	"17.46504"	"73.7"	"100.000"	"82.6699"	"28185"	"28185"	"28157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.2"	""	"106.9"	""	"106.1"	""	"106.4"	""	"142.9"	"154.6"	""	"214"	"54"	"30.000"	"23.000"	"4.28927387861214E-05"	""	"0"	"0.0001683"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"543.35095"	"1628.03830"	"1628.03987"	"-0.96"	"-0.00052"	"7/80"	"7"	"80"	"1283878.19732666"	"HCD"	"MS2"	"12.44888"	"36.3"	"100.000"	"83.2401"	"28367"	"28367"	"28351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.9"	""	"55.4"	""	"50.0"	""	"48.2"	"0.7"	"73.9"	"68.2"	""	"201"	"35"	"30.000"	"23.000"	"0.003222300671128"	"23"	"0.0001889"	"0.0006585"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"814.52283"	"1628.03838"	"1628.03987"	"-0.91"	"-0.00074"	"8/80"	"8"	"80"	"1190769.48077393"	"HCD"	"MS2"	"6.130929"	"81.3"	"100.000"	"82.6676"	"28184"	"28184"	"28157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.9"	""	"113.0"	""	"119.0"	""	"115.2"	"2.4"	"149.6"	"174.9"	""	"201"	"62"	"30.000"	"23.000"	"6.65527586220271E-06"	"20"	"0"	"2.476E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"814.52307"	"1628.03887"	"1628.03987"	"-0.61"	"-0.00050"	"16/80"	"16"	"80"	"351553.88092041"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"83.2788"	"28433"	"28433"	"28413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.2"	""	"39.9"	""	"35.6"	""	"34.2"	"1.4"	"51.3"	"55.3"	""	"202"	"58"	"30.000"	"23.000"	"1.44650977826628E-05"	"21"	"0"	"1.61E-05"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9104"	"0.0000"	"1"	"1"	"1"	"814.52313"	"1628.03899"	"1628.03987"	"-0.54"	"-0.00044"	"9/80"	"9"	"80"	"414230.052429199"	"HCD"	"MS2"	"0"	"29.7"	"100.000"	"83.2446"	"28368"	"28368"	"28351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.8"	""	"50.1"	""	"44.5"	""	"39.7"	"0.5"	"53.9"	"61.4"	""	"202"	"67"	"30.000"	"23.000"	"2.11018909216258E-06"	"23"	"0"	"3.848E-06"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"814.52313"	"1628.03899"	"1628.03987"	"-0.54"	"-0.00044"	"15/80"	"15"	"80"	"813630.201293945"	"HCD"	"MS2"	"15.06134"	"59.1"	"100.000"	"82.6290"	"28117"	"28117"	"28096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.7"	""	"84.4"	""	"86.3"	""	"91.4"	""	"111.3"	"129.1"	""	"202"	"34"	"30.000"	"23.000"	"0.00450112810881479"	"16"	"0"	"7.449E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"543.35138"	"1628.03958"	"1628.03987"	"-0.17"	"-0.00009"	"8/80"	"8"	"80"	"1865253.97515869"	"HCD"	"MS2"	"15.18929"	"48.4"	"100.000"	"82.6219"	"28114"	"28114"	"28096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.7"	""	"70.1"	""	"66.0"	""	"69.5"	""	"95.5"	"102.5"	""	"202"	"50"	"30.000"	"23.000"	"0.000110999589782685"	""	"0"	"0.0001012"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8955"	"0.0000"	"1"	"1"	"1"	"814.52344"	"1628.03960"	"1628.03987"	"-0.16"	"-0.00013"	"18/80"	"18"	"80"	"4536422.38476563"	"HCD"	"MS2"	"0.7150717"	"275.7"	"100.000"	"82.9607"	"28303"	"28303"	"28285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"296.9"	""	"409.0"	""	"384.3"	""	"383.2"	"2.2"	"534.8"	"607.3"	""	"202"	"67"	"30.000"	"23.000"	"2.14942043644254E-06"	"23"	"0"	"3.297E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"814.52350"	"1628.03972"	"1628.03987"	"-0.09"	"-0.00007"	"9/80"	"9"	"80"	"4987909.24273682"	"HCD"	"MS2"	"1.245598"	"319.1"	"100.000"	"82.9315"	"28241"	"28241"	"28224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"354.8"	""	"480.7"	""	"419.9"	""	"421.0"	"0.3"	"654.4"	"700.1"	""	"202"	"63"	"30.000"	"23.000"	"5.22782900270073E-06"	"21"	"0"	"8.813E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"543.35156"	"1628.04013"	"1628.03987"	"0.17"	"0.00009"	"8/80"	"8"	"80"	"10835952.6643677"	"HCD"	"MS2"	"2.843654"	"178.2"	"77.668"	"82.9563"	"28302"	"28302"	"28285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.7"	""	"281.7"	""	"244.8"	""	"221.5"	""	"358.2"	"384.3"	""	"202"	"48"	"30.000"	"23.000"	"0.000157152528792113"	""	"0"	"0.0001133"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLAELEQLK"	"[K].iLLAELEQLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"543.35168"	"1628.04050"	"1628.03987"	"0.39"	"0.00021"	"8/80"	"8"	"80"	"11621114.7984619"	"HCD"	"MS2"	"3.633294"	"185.2"	"70.379"	"82.9359"	"28242"	"28242"	"28224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"201.6"	""	"278.4"	""	"247.3"	""	"252.9"	"1.8"	"382.2"	"395.1"	""	"202"	"54"	"30.000"	"23.000"	"4.11454080582154E-05"	""	"0"	"0.0001197"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPPPNLFK"	"[R].kPPPNLFk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.35468"	"1628.04947"	"1628.05026"	"-0.48"	"-0.00026"	"7/72"	"7"	"72"	"38164165.2756958"	"HCD"	"MS2"	"12.29034"	"1028.4"	"64.460"	"37.3584"	"9693"	"9693"	"9672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1425.6"	""	"1424.9"	""	"1468.9"	""	"1543.6"	""	"1914.6"	"1970.1"	""	"166"	"32"	"29.000"	"22.000"	"0.00568955227955709"	"14"	"0.0001889"	"0.0007182"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPPPNLFK"	"[R].kPPPNLFk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.35468"	"1628.04947"	"1628.05026"	"-0.48"	"-0.00026"	"7/72"	"7"	"72"	"36729107.5616455"	"HCD"	"MS2"	"9.625514"	"1450.8"	"91.428"	"37.4723"	"9783"	"9783"	"9761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2029.6"	""	"2021.7"	""	"2055.4"	""	"2194.7"	"1.1"	"2681.1"	"2763.5"	""	"166"	"31"	"29.000"	"22.000"	"0.00615287500279761"	"14"	"0.0001889"	"0.0005765"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPPPNLFK"	"[R].kPPPNLFk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"543.35492"	"1628.05021"	"1628.05026"	"-0.03"	"-0.00002"	"6/72"	"6"	"72"	"14521313.1169434"	"HCD"	"MS2"	"4.83463"	"384.7"	"60.206"	"37.7798"	"9909"	"9909"	"9889"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"542.1"	""	"543.0"	""	"556.4"	""	"592.8"	"2.8"	"709.8"	"697.0"	""	"173"	"35"	"29.000"	"22.000"	"0.00246613080139088"	"20"	"0.0001889"	"0.0005584"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPPPNLFK"	"[R].kPPPNLFk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"543.35510"	"1628.05075"	"1628.05026"	"0.30"	"0.00016"	"6/72"	"6"	"72"	"13501312.0725708"	"HCD"	"MS2"	"4.978934"	"518.4"	"84.789"	"37.6724"	"9822"	"9822"	"9800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"722.9"	""	"740.6"	""	"770.6"	""	"792.4"	""	"926.6"	"959.8"	""	"173"	"38"	"29.000"	"22.000"	"0.00129424384252168"	"21"	"0.0001889"	"0.0005436"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFQEIYDK"	"[K].dIFQEIYDk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"814.95013"	"1628.89299"	"1628.89359"	"-0.37"	"-0.00030"	"5/88"	"5"	"88"	"289379.912902832"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"64.5270"	"20802"	"20802"	"20771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.9"	""	"31.2"	""	"38.4"	""	"44.6"	"0.7"	"53.0"	"50.2"	""	"940"	"12"	"36.000"	"29.000"	"2.71080237794358"	"14"	"0.000523"	"0.003268"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLAPDGLIFPDR"	"[K].wLAPDGLIFPDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"814.95264"	"1628.89800"	"1628.89979"	"-1.10"	"-0.00090"	"9/100"	"9"	"100"	"2771913.42608643"	"HCD"	"MS2"	"26.16001"	"124.0"	"100.000"	"75.8474"	"25362"	"25362"	"25345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.0"	""	"157.3"	""	"175.2"	""	"191.5"	"2.3"	"227.2"	"235.1"	""	"950"	"38"	"36.000"	"29.000"	"0.00744206758301371"	"21"	"7.476E-05"	"0.0001853"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNSYPSLFIFR"	"[K].gVNSYPSLFIFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498R3"	"DnaJ homolog subfamily C member 10 OS=Rattus norvegicus OX=10116 GN=Dnajc10 PE=2 SV=2"	"Q498R3"	"DnaJ homolog subfamily C member 10 OS=Rattus norvegicus OX=10116 GN=Dnajc10 PE=2 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"814.95276"	"1628.89824"	"1628.89979"	"-0.95"	"-0.00078"	"8/112"	"8"	"112"	"393093.52947998"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"69.8051"	"22896"	"22896"	"22869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.1"	""	"43.7"	""	"46.4"	""	"54.1"	"2.0"	"64.2"	"58.4"	""	"955"	"36"	"36.000"	"29.000"	"0.0125884823673162"	"18"	"0.0002277"	"0.001159"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLAPDGLIFPDR"	"[K].wLAPDGLIFPDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"543.63776"	"1628.89872"	"1628.89979"	"-0.66"	"-0.00036"	"9/100"	"9"	"100"	"1184423.40551758"	"HCD"	"MS2"	"27.30349"	"23.4"	"100.000"	"75.9832"	"25465"	"25465"	"25439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.9"	""	"28.6"	""	"34.8"	""	"43.8"	"0.9"	"36.7"	"42.8"	""	"953"	"17"	"36.000"	"29.000"	"1.02108737143371"	"16"	"0.0002277"	"0.001155"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLAPDGLIFPDR"	"[K].wLAPDGLIFPDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"814.95313"	"1628.89897"	"1628.89979"	"-0.50"	"-0.00041"	"14/100"	"14"	"100"	"474685.084472656"	"HCD"	"MS2"	"14.05844"	"26.7"	"100.000"	"76.0853"	"25506"	"25506"	"25487"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.4"	""	"36.2"	""	"39.2"	""	"40.6"	""	"48.1"	"53.9"	""	"953"	"28"	"36.000"	"29.000"	"0.0727885226750442"	"20"	"0.0003839"	"0.001904"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLAPDGLIFPDR"	"[K].wLAPDGLIFPDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"814.95313"	"1628.89897"	"1628.89979"	"-0.50"	"-0.00041"	"15/100"	"15"	"100"	"3311751.92694092"	"HCD"	"MS2"	"56.42754"	"142.7"	"100.000"	"75.7980"	"25393"	"25393"	"25375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"189.6"	""	"198.4"	""	"200.1"	""	"237.0"	"2.8"	"254.2"	"269.7"	""	"953"	"15"	"36.000"	"29.000"	"1.62578422387849"	"13"	"0.0001889"	"0.0008281"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDGIYVSEK"	"[K].fLDGIYVSEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17077"	"60S ribosomal protein L9 OS=Rattus norvegicus OX=10116 GN=Rpl9 PE=1 SV=1"	"P17077"	"60S ribosomal protein L9 OS=Rattus norvegicus OX=10116 GN=Rpl9 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"543.64691"	"1628.92618"	"1628.92998"	"-2.33"	"-0.00127"	"10/84"	"10"	"84"	"3758228.59387207"	"HCD"	"MS2"	"14.21477"	"129.1"	"100.000"	"59.9378"	"18928"	"18928"	"18900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.4"	""	"193.1"	""	"208.8"	""	"197.5"	"3.7"	"223.2"	"208.9"	""	"838"	"16"	"36.000"	"29.000"	"0.96208628355908"	"16"	"0.0006037"	"0.004328"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDGIYVSEK"	"[K].fLDGIYVSEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17077"	"60S ribosomal protein L9 OS=Rattus norvegicus OX=10116 GN=Rpl9 PE=1 SV=1"	"P17077"	"60S ribosomal protein L9 OS=Rattus norvegicus OX=10116 GN=Rpl9 PE=1 SV=1"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"814.96753"	"1628.92778"	"1628.92998"	"-1.35"	"-0.00110"	"7/84"	"7"	"84"	"1604922.55401611"	"HCD"	"MS2"	"0"	"139.0"	"100.000"	"59.8665"	"18899"	"18899"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.1"	""	"229.0"	""	"214.4"	""	"218.7"	""	"240.7"	"211.8"	""	"835"	"49"	"36.000"	"29.000"	"0.000541572345635802"	"19"	"0"	"3.714E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDGIYVSEK"	"[K].fLDGIYVSEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17077"	"60S ribosomal protein L9 OS=Rattus norvegicus OX=10116 GN=Rpl9 PE=1 SV=1"	"P17077"	"60S ribosomal protein L9 OS=Rattus norvegicus OX=10116 GN=Rpl9 PE=1 SV=1"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"814.96777"	"1628.92827"	"1628.92998"	"-1.05"	"-0.00086"	"9/84"	"9"	"84"	"1731154.8380127"	"HCD"	"MS2"	"0"	"155.6"	"100.000"	"59.7309"	"18790"	"18790"	"18761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.2"	""	"248.7"	""	"241.9"	""	"238.4"	"2.1"	"269.4"	"230.5"	""	"841"	"61"	"36.000"	"29.000"	"3.71335098126005E-05"	"24"	"0"	"2.225E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDGIYVSEK"	"[K].fLDGIYVSEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17077"	"60S ribosomal protein L9 OS=Rattus norvegicus OX=10116 GN=Rpl9 PE=1 SV=1"	"P17077"	"60S ribosomal protein L9 OS=Rattus norvegicus OX=10116 GN=Rpl9 PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"543.64911"	"1628.93277"	"1628.92998"	"1.71"	"0.00093"	"11/84"	"11"	"84"	"3866582.85308838"	"HCD"	"MS2"	"22.67125"	"135.6"	"100.000"	"59.7976"	"18817"	"18817"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"190.5"	""	"199.2"	""	"224.8"	""	"208.7"	"3.0"	"234.0"	"222.7"	""	"857"	"22"	"36.000"	"29.000"	"0.278580572312014"	"15"	"0.0003571"	"0.001516"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQQYYNILK"	"[K].tQQYYNILk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"0"	"2"	"2"	"0.7818"	"0.0000"	"1"	"1"	"1"	"814.97516"	"1628.94304"	"1628.94121"	"1.12"	"0.00091"	"8/78"	"8"	"78"	"992042.602539063"	"HCD"	"MS2"	"0"	"103.1"	"100.000"	"45.3519"	"12999"	"12999"	"12971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.2"	""	"161.5"	""	"175.8"	""	"131.6"	""	"182.7"	"172.7"	""	"809"	"55"	"36.000"	"29.000"	"0.000116659074301471"	"28"	"0"	"5.328E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQQYYNILK"	"[K].tQQYYNILk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"814.97552"	"1628.94377"	"1628.94121"	"1.57"	"0.00128"	"8/78"	"8"	"78"	"1145648.59423828"	"HCD"	"MS2"	"0"	"105.2"	"100.000"	"45.0601"	"12831"	"12831"	"12800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.4"	""	"183.4"	""	"169.7"	""	"138.4"	"0.6"	"176.4"	"165.2"	""	"811"	"47"	"36.000"	"29.000"	"0.000803509208963967"	"28"	"0"	"9.171E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSLQLQPDK"	"[K].lQSLqLQPDk.[A]"	"N-Term(TMT6plex); Q5(Deamidated); K10(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"3"	"3"	"0.0526"	"0.0000"	"1"	"1"	"1"	"543.66467"	"1628.97947"	"1628.96234"	"10.51"	"0.00571"	"11/100"	"11"	"100"	"3683115.29473877"	"HCD"	"MS2"	"0"	"141.8"	"100.000"	"46.4477"	"13442"	"13442"	"13413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.4"	""	"178.2"	""	"193.2"	""	"247.4"	""	"284.9"	"247.5"	""	"610"	"38"	"34.000"	"27.000"	"0.00450090492649148"	"21"	"0.0002277"	"0.001351"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSLQLQPDK"	"[K].lQSLQLqPDk.[A]"	"N-Term(TMT6plex); Q7(Deamidated); K10(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.2895"	"0.0000"	"1"	"1"	"1"	"814.99359"	"1628.97991"	"1628.96234"	"10.78"	"0.00878"	"8/100"	"8"	"100"	"519712.428710938"	"HCD"	"MS2"	"0"	"47.5"	"100.000"	"46.2615"	"13318"	"13318"	"13288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.3"	""	"56.5"	""	"62.2"	""	"84.4"	""	"92.2"	"90.0"	""	"604"	"38"	"34.000"	"27.000"	"0.00457095497027735"	"23"	"0.006627"	"0.2419"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNRPLTLSEK"	"[R].lNRPLTLSEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.67432"	"1629.00840"	"1629.00996"	"-0.96"	"-0.00052"	"6/94"	"6"	"94"	"28995129.5670166"	"HCD"	"MS2"	"25.0794"	"666.4"	"50.251"	"35.8891"	"9133"	"9133"	"9113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1371.7"	""	"977.3"	""	"974.8"	""	"895.9"	""	"1024.6"	"1048.7"	""	"377"	"27"	"32.000"	"25.000"	"0.0418130025132341"	"14"	"0.0001889"	"0.0008945"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGDEIPYSPFR"	"[K].yGGDEIPYSPFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"815.40631"	"1629.80535"	"1629.81104"	"-3.49"	"-0.00285"	"8/98"	"8"	"98"	"733051.272277832"	"HCD"	"MS2"	"42.73785"	"62.7"	"100.000"	"50.9292"	"15268"	"15268"	"15238"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.1"	""	"72.7"	""	"77.8"	""	"116.1"	""	"135.5"	"112.2"	""	"642"	"11"	"35.000"	"28.000"	"2.59122444709877"	"22"	"0.004631"	"0.1331"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLFNNAMK"	"[R].sSGSLFNNAmk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"815.43585"	"1629.86443"	"1629.86706"	"-1.62"	"-0.00132"	"10/94"	"10"	"94"	"508451.322692871"	"HCD"	"MS2"	"0"	"45.4"	"100.000"	"36.0059"	"9181"	"9181"	"9161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.8"	""	"72.3"	""	"65.5"	""	"84.4"	""	"64.3"	"58.0"	""	"973"	"47"	"36.000"	"29.000"	"0.000867127270363494"	"18"	"0.0001889"	"0.0009804"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLFNNAMK"	"[R].sSGSLFNNAmk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"815.43701"	"1629.86675"	"1629.86706"	"-0.19"	"-0.00016"	"15/94"	"15"	"94"	"580382.579711914"	"HCD"	"MS2"	"16.91899"	"51.8"	"100.000"	"35.9278"	"9106"	"9106"	"9083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.3"	""	"81.7"	""	"77.1"	""	"99.0"	"0.4"	"70.3"	"76.4"	""	"969"	"48"	"36.000"	"29.000"	"0.000759090893467398"	"19"	"0.0001889"	"0.0006799"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGMGQk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"543.96979"	"1629.89481"	"1629.89692"	"-1.30"	"-0.00070"	"15/100"	"15"	"100"	"7667317.89746094"	"HCD"	"MS2"	"8.763412"	"233.7"	"100.000"	"30.2664"	"6841"	"6841"	"6822"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"385.7"	""	"345.8"	""	"300.7"	""	"268.8"	"5.3"	"410.8"	"496.8"	""	"963"	"42"	"36.000"	"29.000"	"0.00306617043317161"	"18"	"0"	"4.698E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGMGQk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.97015"	"1629.89591"	"1629.89692"	"-0.62"	"-0.00034"	"8/100"	"8"	"100"	"7716511.51983643"	"HCD"	"MS2"	"15.54495"	"214.6"	"100.000"	"30.1840"	"6766"	"6766"	"6746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.6"	""	"329.9"	""	"274.1"	""	"231.1"	"2.9"	"374.3"	"447.1"	""	"953"	"54"	"36.000"	"29.000"	"0.000170632952279406"	"16"	"0"	"2.678E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGMGQk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9306"	"0.0000"	"1"	"1"	"1"	"815.45160"	"1629.89592"	"1629.89692"	"-0.61"	"-0.00050"	"18/100"	"18"	"100"	"663080.517700195"	"HCD"	"MS2"	"0"	"63.3"	"100.000"	"30.0094"	"6695"	"6695"	"6666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.0"	""	"92.1"	""	"72.9"	""	"61.6"	""	"127.7"	"150.8"	""	"953"	"72"	"36.000"	"29.000"	"2.77372183267821E-06"	"22"	"0"	"3.927E-06"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGMGQk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"815.45160"	"1629.89592"	"1629.89692"	"-0.61"	"-0.00050"	"9/100"	"9"	"100"	"980687.628295898"	"HCD"	"MS2"	"5.11117"	"88.4"	"100.000"	"30.0580"	"6756"	"6756"	"6729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.8"	""	"132.3"	""	"102.1"	""	"81.6"	""	"162.8"	"205.3"	""	"953"	"66"	"36.000"	"29.000"	"1.16161685495271E-05"	"19"	"0"	"4.186E-06"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGMGQk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.97040"	"1629.89664"	"1629.89692"	"-0.17"	"-0.00009"	"8/100"	"8"	"100"	"44379648.9667358"	"HCD"	"MS2"	"29.68967"	"1126.0"	"100.000"	"29.9480"	"6711"	"6711"	"6681"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1817.8"	""	"1638.8"	""	"1318.4"	""	"1099.6"	""	"2207.7"	"2618.8"	""	"950"	"42"	"36.000"	"29.000"	"0.00291536952453277"	"15"	"0"	"6.459E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGMGQk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.97070"	"1629.89756"	"1629.89692"	"0.39"	"0.00021"	"8/100"	"8"	"100"	"44683812.2695923"	"HCD"	"MS2"	"17.05109"	"1000.8"	"100.000"	"29.8808"	"6642"	"6642"	"6618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1718.7"	""	"1411.8"	""	"1150.3"	""	"926.7"	""	"1951.2"	"2337.3"	""	"936"	"51"	"36.000"	"29.000"	"0.000359953046054133"	"16"	"0"	"1.939E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"STLNEIYFGKTK"	"[R].sTLNEIYFGKTK.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"1"	"2"	"2"	"0.0423"	"0.0000"	"1"	"1"	"1"	"815.46600"	"1629.92473"	"1629.90494"	"12.14"	"0.00990"	"18/124"	"18"	"124"	"4284555.58074951"	"HCD"	"MS2"	"0"	"341.1"	"100.000"	"52.2731"	"15817"	"15817"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"531.1"	""	"516.8"	""	"512.9"	""	"534.9"	""	"548.0"	"583.5"	""	"900"	"71"	"36.000"	"29.000"	"3.20046081143998E-06"	"23"	"0.0003571"	"0.001497"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"STLNEIYFGK"	"[R].sTLNEIYFGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	""	"0.0423"	"2"	"2"	"2"	"815.46600"	"1629.92473"	"1629.92523"	"-0.31"	"-0.00025"	"18/92"	"18"	"92"	"4284555.58074951"	"HCD"	"MS2"	"0"	"341.1"	"100.000"	"52.2731"	"15817"	"15817"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"531.1"	""	"516.8"	""	"512.9"	""	"534.9"	""	"548.0"	"583.5"	""	"900"	"68"	"36.000"	"29.000"	"6.88989357756912E-06"	"23"	"0"	"6.488E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"STLNEIYFGKTK"	"[R].sTLNEIYFGKTK.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"1"	"3"	"3"	"0.0444"	"0.0000"	"1"	"1"	"1"	"543.97980"	"1629.92484"	"1629.90494"	"12.21"	"0.00663"	"11/124"	"11"	"124"	"13231107.5726318"	"HCD"	"MS2"	"18.22839"	"366.8"	"100.000"	"52.3008"	"15829"	"15829"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"545.5"	""	"540.5"	""	"550.7"	""	"565.7"	""	"646.7"	"623.8"	""	"892"	"45"	"36.000"	"29.000"	"0.00133455002792725"	"19"	"0.0001889"	"0.0005985"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"STLNEIYFGK"	"[R].sTLNEIYFGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"3"	"3"	""	"0.0444"	"2"	"2"	"2"	"543.97980"	"1629.92484"	"1629.92523"	"-0.24"	"-0.00013"	"11/92"	"11"	"92"	"13231107.5726318"	"HCD"	"MS2"	"18.22839"	"366.8"	"100.000"	"52.3008"	"15829"	"15829"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"545.5"	""	"540.5"	""	"550.7"	""	"565.7"	""	"646.7"	"623.8"	""	"892"	"43"	"36.000"	"29.000"	"0.0023568658229173"	"19"	"0"	"8.074E-06"	"1.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"STLNEIYFGKTK"	"[R].sTLNEIYFGKTK.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"1"	"3"	"3"	"0.0465"	"0.0000"	"1"	"1"	"1"	"543.98010"	"1629.92575"	"1629.90494"	"12.77"	"0.00694"	"11/124"	"11"	"124"	"11603056.2567749"	"HCD"	"MS2"	"7.737488"	"329.8"	"100.000"	"52.0938"	"15694"	"15694"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"504.4"	""	"471.5"	""	"490.3"	""	"526.4"	""	"549.8"	"580.6"	""	"904"	"43"	"36.000"	"29.000"	"0.00207557501802264"	"19"	"0.0001889"	"0.0005116"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"STLNEIYFGK"	"[R].sTLNEIYFGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"3"	"3"	""	"0.0465"	"2"	"2"	"2"	"543.98010"	"1629.92575"	"1629.92523"	"0.32"	"0.00018"	"11/92"	"11"	"92"	"11603056.2567749"	"HCD"	"MS2"	"7.737488"	"329.8"	"100.000"	"52.0938"	"15694"	"15694"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"504.4"	""	"471.5"	""	"490.3"	""	"526.4"	""	"549.8"	"580.6"	""	"904"	"41"	"36.000"	"29.000"	"0.00356564773163586"	"19"	"0"	"6.71E-06"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLNEIYFGKTK"	"[R].sTLNEIYFGKTK.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"1"	"2"	"2"	"0.0933"	"0.0000"	"1"	"1"	"1"	"815.46667"	"1629.92607"	"1629.90494"	"12.97"	"0.01057"	"18/124"	"18"	"124"	"5250402.35662842"	"HCD"	"MS2"	"0"	"440.8"	"100.000"	"52.0869"	"15691"	"15691"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"711.6"	""	"666.4"	""	"649.0"	""	"695.4"	""	"719.7"	"730.3"	""	"907"	"75"	"36.000"	"29.000"	"1.45069893224505E-06"	""	"0.0006037"	"0.003754"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDALGNAIDGK"	"[R].vVDALGNAIDGk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.48010"	"1629.95293"	"1629.95759"	"-2.86"	"-0.00233"	"17/112"	"17"	"112"	"1232657.21307373"	"HCD"	"MS2"	"0"	"99.3"	"100.000"	"53.9768"	"16498"	"16498"	"16477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.8"	""	"139.5"	""	"130.7"	""	"179.7"	"0.2"	"185.2"	"188.6"	""	"807"	"48"	"36.000"	"29.000"	"0.000581893544340286"	"16"	"0"	"5.587E-06"	"1.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDALGNAIDGK"	"[R].vVDALGNAIDGk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"543.99011"	"1629.95578"	"1629.95759"	"-1.11"	"-0.00060"	"11/112"	"11"	"112"	"2619360.14733887"	"HCD"	"MS2"	"42.85635"	"99.5"	"100.000"	"53.6561"	"16316"	"16316"	"16301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.0"	""	"129.0"	""	"131.2"	""	"173.8"	""	"193.0"	"194.2"	""	"794"	"43"	"35.000"	"28.000"	"0.00216665870853235"	"19"	"0"	"2.228E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDALGNAIDGK"	"[R].vVDALGNAIDGk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"543.99023"	"1629.95615"	"1629.95759"	"-0.88"	"-0.00048"	"11/112"	"11"	"112"	"3772382.46557617"	"HCD"	"MS2"	"28.50856"	"124.2"	"100.000"	"53.9447"	"16485"	"16485"	"16468"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.7"	""	"167.2"	""	"172.3"	""	"201.5"	"2.7"	"237.9"	"247.8"	""	"777"	"48"	"35.000"	"28.000"	"0.000662813008127714"	"23"	"0"	"1.311E-05"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDALGNAIDGK"	"[R].vVDALGNAIDGk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"543.99042"	"1629.95670"	"1629.95759"	"-0.55"	"-0.00030"	"11/112"	"11"	"112"	"1445544.14215088"	"HCD"	"MS2"	"46.46362"	"68.6"	"100.000"	"53.9996"	"16452"	"16452"	"16434"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.3"	""	"95.2"	""	"100.5"	""	"110.3"	""	"124.1"	"136.7"	""	"813"	"45"	"36.000"	"29.000"	"0.00129437629258167"	"23"	"0"	"6.985E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDALGNAIDGK"	"[R].vVDALGNAIDGk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"815.48224"	"1629.95720"	"1629.95759"	"-0.24"	"-0.00020"	"11/112"	"11"	"112"	"1255309.8994751"	"HCD"	"MS2"	"0"	"96.4"	"100.000"	"53.8209"	"16381"	"16381"	"16366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.5"	""	"137.6"	""	"150.7"	""	"153.0"	"2.1"	"173.0"	"173.7"	""	"812"	"76"	"36.000"	"29.000"	"9.62777724498631E-07"	"19"	"0"	"1.661E-06"	"1.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNKPPYPK"	"[K].vNkPPYPk.[L]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.01459"	"1630.02921"	"1630.02952"	"-0.19"	"-0.00011"	"5/70"	"5"	"70"	"32329563.736084"	"HCD"	"MS2"	"7.431126"	"1576.5"	"79.199"	"31.8097"	"7472"	"7472"	"7450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2209.8"	""	"2188.6"	""	"2180.7"	""	"2419.3"	""	"2880.3"	"3072.3"	""	"340"	"2"	"32.000"	"25.000"	"10.0565477809831"	"13"	"0.0008453"	"0.008389"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SGKPAELLK"	"[R].sGkPAELLk.[M]"	"N-Term(TMT6plex); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"544.02155"	"1630.05008"	"1630.05065"	"-0.35"	"-0.00019"	"5/86"	"5"	"86"	"87538452.1730957"	"HCD"	"MS2"	"10.32013"	"1007.4"	"19.472"	"34.7170"	"8652"	"8652"	"8634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1617.9"	""	"1308.7"	""	"1375.5"	""	"1646.5"	"4.9"	"1738.4"	"1843.8"	""	"214"	"6"	"30.000"	"23.000"	"2.40648842824429"	"19"	"0.000494"	"0.002677"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGKPAELLK"	"[R].sGkPAELLk.[M]"	"N-Term(TMT6plex); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"544.02161"	"1630.05027"	"1630.05065"	"-0.24"	"-0.00013"	"10/86"	"10"	"86"	"58229358.4348145"	"HCD"	"MS2"	"12.13462"	"1030.3"	"30.970"	"34.6367"	"8576"	"8576"	"8563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1667.1"	""	"1306.0"	""	"1432.9"	""	"1711.6"	"1.9"	"1795.0"	"1837.2"	""	"214"	"10"	"30.000"	"23.000"	"1.07990058810205"	"19"	"0.0003839"	"0.001684"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGKPAELLK"	"[R].sGkPAELLk.[M]"	"N-Term(TMT6plex); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"815.52881"	"1630.05034"	"1630.05065"	"-0.19"	"-0.00016"	"5/86"	"5"	"86"	"207759.095458984"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"34.8638"	"8713"	"8713"	"8682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.2"	""	"24.3"	""	"20.6"	""	"27.7"	""	"26.8"	"32.3"	""	"214"	"18"	"30.000"	"23.000"	"0.188531436966044"	"22"	"0.00109"	"0.01483"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGKPAELLK"	"[R].sGkPAELLk.[M]"	"N-Term(TMT6plex); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"815.52948"	"1630.05168"	"1630.05065"	"0.63"	"0.00051"	"10/86"	"10"	"86"	"737244.515625"	"HCD"	"MS2"	"0"	"66.2"	"100.000"	"34.7033"	"8604"	"8604"	"8574"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.2"	""	"73.5"	""	"100.0"	""	"107.5"	""	"112.0"	"132.1"	""	"199"	"25"	"29.000"	"22.000"	"0.0329475465875178"	""	"0.000523"	"0.002867"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"WFVFDTETK"	"[R].wFVFDTETk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"544.30072"	"1630.88761"	"1630.88812"	"-0.31"	"-0.00017"	"8/70"	"8"	"70"	"1125166.97790527"	"HCD"	"MS2"	"15.09519"	"42.0"	"100.000"	"68.5966"	"22454"	"22454"	"22426"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.5"	""	"55.3"	""	"64.7"	""	"71.5"	"1.4"	"73.1"	"79.9"	""	"1036"	"15"	"37.000"	"30.000"	"1.65321660894219"	"13"	"0.0003839"	"0.001639"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFVFDTETK"	"[R].wFVFDTETk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"544.30090"	"1630.88816"	"1630.88812"	"0.03"	"0.00001"	"9/70"	"9"	"70"	"1263139.86480713"	"HCD"	"MS2"	"25.85003"	"45.4"	"100.000"	"68.7202"	"22453"	"22453"	"22426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.4"	""	"63.5"	""	"65.0"	""	"72.1"	"2.9"	"87.0"	"79.3"	""	"1050"	"24"	"37.000"	"30.000"	"0.187568240029763"	"29"	"0.0001889"	"0.0009431"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFVFDTETK"	"[R].wFVFDTETk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"815.94775"	"1630.88823"	"1630.88812"	"0.07"	"0.00006"	"14/70"	"14"	"70"	"615160.938232422"	"HCD"	"MS2"	"6.318221"	"60.7"	"100.000"	"68.7325"	"22509"	"22509"	"22490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.8"	""	"88.1"	""	"78.4"	""	"95.3"	"3.1"	"114.9"	"125.5"	""	"1047"	"48"	"37.000"	"30.000"	"0.000763689265254145"	"24"	"0"	"6.818E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFVFDTETK"	"[R].wFVFDTETk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"815.94788"	"1630.88848"	"1630.88812"	"0.22"	"0.00018"	"14/70"	"14"	"70"	"2026583.48052979"	"HCD"	"MS2"	"25.523"	"186.3"	"100.000"	"68.5911"	"22400"	"22400"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.2"	""	"275.8"	""	"241.5"	""	"314.3"	"1.8"	"351.8"	"354.8"	""	"1046"	"45"	"37.000"	"30.000"	"0.00176807909335728"	"21"	"0"	"0.0001304"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFVFDTETK"	"[R].wFVFDTETk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"815.94818"	"1630.88909"	"1630.88812"	"0.59"	"0.00049"	"6/70"	"6"	"70"	"404497.016845703"	"HCD"	"MS2"	"7.305753"	"45.1"	"100.000"	"68.9162"	"22533"	"22533"	"22506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.4"	""	"67.3"	""	"67.3"	""	"69.6"	"2.0"	"73.8"	"92.8"	""	"1106"	"16"	"37.000"	"30.000"	"1.49528897535219"	"16"	"0.0006037"	"0.00538"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WFVFDTETK"	"[R].wFVFDTETk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"815.94879"	"1630.89031"	"1630.88812"	"1.34"	"0.00110"	"8/70"	"8"	"70"	"1812738.97094727"	"HCD"	"MS2"	"32.13782"	"156.7"	"100.000"	"68.4445"	"22392"	"22392"	"22362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.1"	""	"218.4"	""	"227.1"	""	"251.9"	"0.8"	"284.1"	"305.4"	""	"1093"	"51"	"37.000"	"30.000"	"0.000406059958860548"	"24"	"0"	"0.0001099"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGKPIEASIR"	"[K].tTGkPIEASIR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"544.33411"	"1630.98777"	"1630.98923"	"-0.90"	"-0.00049"	"5/110"	"5"	"110"	"6677186.75213623"	"HCD"	"MS2"	"23.42362"	"309.4"	"100.000"	"30.5434"	"6914"	"6914"	"6888"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"446.3"	""	"396.5"	""	"416.5"	""	"501.5"	"1.6"	"579.7"	"590.0"	""	"659"	"6"	"35.000"	"28.000"	"7.74204014469518"	"14"	"0.0001889"	"0.0003954"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGKPIEASIR"	"[K].tTGkPIEASIR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"544.33435"	"1630.98850"	"1630.98923"	"-0.45"	"-0.00024"	"5/110"	"5"	"110"	"7595588.23272705"	"HCD"	"MS2"	"16.00345"	"349.0"	"100.000"	"30.6126"	"6983"	"6983"	"6960"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"508.9"	""	"453.8"	""	"484.0"	""	"563.3"	"0.4"	"638.2"	"657.5"	""	"663"	"9"	"35.000"	"28.000"	"4.0223840392914"	"15"	"0"	"0.0001674"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLYGPPGTGK"	"[R].gILLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.33551"	"1630.99198"	"1630.99325"	"-0.78"	"-0.00042"	"10/88"	"10"	"88"	"4043178.18127441"	"HCD"	"MS2"	"28.27563"	"166.3"	"100.000"	"52.5998"	"15901"	"15901"	"15874"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.4"	""	"225.0"	""	"236.7"	""	"238.8"	"0.7"	"330.6"	"320.5"	""	"603"	"30"	"34.000"	"27.000"	"0.0322320046085631"	"14"	"0.0001308"	"0.0003022"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLYGPPGTGK"	"[R].gILLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.33563"	"1630.99234"	"1630.99325"	"-0.56"	"-0.00030"	"10/88"	"10"	"88"	"28391904.0804443"	"HCD"	"MS2"	"43.29272"	"306.1"	"50.608"	"52.4691"	"15897"	"15897"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"422.3"	""	"440.9"	""	"451.8"	""	"490.4"	""	"554.3"	"541.6"	""	"601"	"38"	"34.000"	"27.000"	"0.00522209149039187"	"15"	"0"	"0.0001651"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLYGPPGTGK"	"[R].gILLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"815.99994"	"1630.99260"	"1630.99325"	"-0.40"	"-0.00032"	"10/88"	"10"	"88"	"1468172.9942627"	"HCD"	"MS2"	"11.53429"	"108.2"	"100.000"	"52.5860"	"15895"	"15895"	"15874"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.7"	""	"142.6"	""	"148.1"	""	"171.9"	""	"219.8"	"207.3"	""	"601"	"50"	"34.000"	"27.000"	"0.0003219915512239"	"21"	"0"	"0.0001263"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLYGPPGTGK"	"[R].gILLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.33575"	"1630.99271"	"1630.99325"	"-0.33"	"-0.00018"	"12/88"	"12"	"88"	"29418743.5949707"	"HCD"	"MS2"	"36.79902"	"276.6"	"41.961"	"52.2732"	"15767"	"15767"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"400.5"	""	"375.6"	""	"428.1"	""	"422.8"	""	"504.6"	"488.3"	""	"598"	"35"	"34.000"	"27.000"	"0.00913421412851438"	"15"	"7.476E-05"	"0.0001875"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLYGPPGTGK"	"[R].gILLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"816.00037"	"1630.99346"	"1630.99325"	"0.13"	"0.00010"	"11/88"	"11"	"88"	"13367834.9189453"	"HCD"	"MS2"	"37.41177"	"764.1"	"100.000"	"52.2686"	"15765"	"15765"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1090.3"	""	"1059.1"	""	"1111.8"	""	"1218.6"	"0.8"	"1363.5"	"1392.3"	""	"657"	"64"	"35.000"	"28.000"	"1.31988281363877E-05"	"24"	"0"	"0.0001317"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLYGPPGTGK"	"[R].gILLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"816.00055"	"1630.99382"	"1630.99325"	"0.35"	"0.00029"	"9/88"	"9"	"88"	"1558184.68566895"	"HCD"	"MS2"	"14.20699"	"108.0"	"100.000"	"52.7847"	"16026"	"16026"	"16006"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.8"	""	"135.5"	""	"156.5"	""	"173.7"	"1.0"	"201.4"	"202.3"	""	"657"	"47"	"35.000"	"28.000"	"0.000640523951020518"	"20"	"0"	"8.793E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLYGPPGTGK"	"[R].gILLYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"816.00055"	"1630.99382"	"1630.99325"	"0.35"	"0.00029"	"11/88"	"11"	"88"	"12622467.4572144"	"HCD"	"MS2"	"39.11549"	"718.1"	"95.849"	"52.4624"	"15895"	"15895"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1019.2"	""	"1006.4"	""	"1062.0"	""	"1133.6"	"2.6"	"1289.0"	"1287.2"	""	"657"	"61"	"35.000"	"28.000"	"2.65176707436744E-05"	"24"	"0"	"9.399E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQAAFQLGSPWR"	"[K].aAQAAFQLGSPWR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8841"	"0.0000"	"1"	"1"	"1"	"816.44531"	"1631.88335"	"1631.88554"	"-1.34"	"-0.00110"	"10/116"	"10"	"116"	"2064119.24945068"	"HCD"	"MS2"	"0"	"107.4"	"100.000"	"53.2144"	"16202"	"16202"	"16182"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.4"	""	"157.2"	""	"162.9"	""	"154.5"	"2.3"	"180.6"	"203.1"	""	"969"	"69"	"36.000"	"29.000"	"5.77156752889263E-06"	"25"	"0"	"8.439E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQAAFQLGSPWR"	"[K].aAQAAFQLGSPWR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"816.44550"	"1631.88371"	"1631.88554"	"-1.12"	"-0.00091"	"11/116"	"11"	"116"	"1895173.56524658"	"HCD"	"MS2"	"0"	"101.2"	"100.000"	"53.0478"	"16084"	"16084"	"16066"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.5"	""	"151.5"	""	"137.1"	""	"152.7"	""	"191.6"	"183.7"	""	"966"	"42"	"36.000"	"29.000"	"0.00307572236598523"	"21"	"0"	"1.795E-05"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQAAFQLGSPWR"	"[K].aAQAAFQLGSPWR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"816.44592"	"1631.88457"	"1631.88554"	"-0.60"	"-0.00049"	"9/116"	"9"	"116"	"5841203.22680664"	"HCD"	"MS2"	"17.25971"	"264.4"	"100.000"	"52.9132"	"16079"	"16079"	"16054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"408.5"	""	"386.7"	""	"378.8"	""	"389.7"	""	"469.3"	"471.3"	""	"1008"	"70"	"37.000"	"30.000"	"5.6549730096819E-06"	"25"	"0"	"1.368E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQAAFQLGSPWR"	"[K].aAQAAFQLGSPWR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"544.63306"	"1631.88462"	"1631.88554"	"-0.57"	"-0.00031"	"13/116"	"13"	"116"	"12318217.0441284"	"HCD"	"MS2"	"35.16204"	"108.4"	"100.000"	"52.7469"	"15961"	"15961"	"15938"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.5"	""	"137.7"	""	"148.4"	""	"172.9"	"2.7"	"202.9"	"211.7"	""	"1008"	"45"	"37.000"	"30.000"	"0.00159746200137392"	"24"	"0"	"1.579E-05"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQAAFQLGSPWR"	"[K].aAQAAFQLGSPWR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"544.63324"	"1631.88517"	"1631.88554"	"-0.23"	"-0.00012"	"13/116"	"13"	"116"	"15210666.3850708"	"HCD"	"MS2"	"21.97721"	"104.5"	"100.000"	"52.9499"	"16094"	"16094"	"16070"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.7"	""	"136.6"	""	"152.7"	""	"165.9"	"1.8"	"179.3"	"197.8"	""	"1002"	"47"	"36.000"	"30.000"	"0.00112159929042274"	"24"	"0"	"2.539E-05"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQAAFQLGSPWR"	"[K].aAQAAFQLGSPWR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"816.44629"	"1631.88530"	"1631.88554"	"-0.15"	"-0.00012"	"9/116"	"9"	"116"	"7018249.44042969"	"HCD"	"MS2"	"6.944383"	"295.6"	"100.000"	"52.7375"	"15957"	"15957"	"15938"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"456.5"	""	"445.5"	""	"414.0"	""	"456.2"	""	"483.8"	"541.8"	""	"1007"	"70"	"37.000"	"30.000"	"5.58469519484619E-06"	"25"	"0"	"8.366E-06"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNLVAIFDINR"	"[K].lDNLVAIFDINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"544.64740"	"1631.92765"	"1631.93182"	"-2.56"	"-0.00139"	"12/120"	"12"	"120"	"447319.32989502"	"HCD"	"MS2"	"6.180047"	"4.7"	"100.000"	"87.8323"	"30216"	"30216"	"30206"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.3"	""	"4.4"	""	"7.7"	""	"10.9"	""	"6.6"	"8.8"	""	"1006"	"38"	"37.000"	"30.000"	"0.00817651024142493"	"17"	"0"	"7.15E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNLVAIFDINR"	"[K].lDNLVAIFDINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"544.64758"	"1631.92820"	"1631.93182"	"-2.22"	"-0.00121"	"13/120"	"13"	"120"	"332842.781494141"	"HCD"	"MS2"	"4.390857"	"4.6"	"100.000"	"87.9328"	"30304"	"30304"	"30295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.6"	""	"6.6"	""	"8.3"	""	"8.1"	""	"7.7"	"7.6"	""	"1018"	"39"	"37.000"	"30.000"	"0.00639319251520692"	"17"	"0"	"3.647E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNLVAIFDINR"	"[K].lDNLVAIFDINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.8036"	"0.0000"	"1"	"1"	"1"	"544.64801"	"1631.92948"	"1631.93182"	"-1.44"	"-0.00078"	"13/120"	"13"	"120"	"330707.820373535"	"HCD"	"MS2"	"5.074114"	"4.7"	"100.000"	"87.6413"	"30196"	"30196"	"30186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"4.0"	""	"6.8"	""	"10.7"	""	"11.1"	"7.2"	""	"1042"	"56"	"37.000"	"30.000"	"0.000128185152176091"	"27"	"0"	"3.339E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNLVAIFDINR"	"[K].lDNLVAIFDINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"816.46936"	"1631.93144"	"1631.93182"	"-0.23"	"-0.00019"	"7/120"	"7"	"120"	"157561.598083496"	"HCD"	"MS2"	"15.61894"	"9.8"	"100.000"	"87.4949"	"30089"	"30089"	"30077"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.3"	""	"10.6"	""	"10.7"	""	"19.6"	""	"19.0"	"19.2"	""	"1028"	"50"	"37.000"	"30.000"	"0.000465546556861675"	"19"	"0.0001308"	"0.000223"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNLVAIFDINR"	"[K].lDNLVAIFDINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"816.46948"	"1631.93169"	"1631.93182"	"-0.08"	"-0.00007"	"15/120"	"15"	"120"	"774046.838806152"	"HCD"	"MS2"	"0"	"38.1"	"100.000"	"87.8564"	"30275"	"30275"	"30269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.4"	""	"51.4"	""	"56.2"	""	"58.8"	""	"64.2"	"74.0"	""	"1034"	"59"	"37.000"	"30.000"	"7.18605510337304E-05"	"21"	"0"	"1.555E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNLVAIFDINR"	"[K].lDNLVAIFDINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"816.46967"	"1631.93205"	"1631.93182"	"0.14"	"0.00012"	"7/120"	"7"	"120"	"177089.583068848"	"HCD"	"MS2"	"15.58237"	"8.8"	"100.000"	"87.5991"	"30180"	"30180"	"30169"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.3"	""	"10.9"	""	"13.9"	""	"15.3"	""	"14.9"	"12.1"	""	"1032"	"51"	"37.000"	"30.000"	"0.000440199658833076"	"18"	"0"	"0.0001132"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNLVAIFDINR"	"[K].lDNLVAIFDINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.46985"	"1631.93242"	"1631.93182"	"0.37"	"0.00030"	"5/120"	"5"	"120"	"58704.4197387695"	"HCD"	"MS2"	"8.850279"	"4.2"	"100.000"	"88.1298"	"30378"	"30378"	"30367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.7"	""	"4.2"	""	"6.3"	""	"7.9"	""	"6.2"	"9.0"	""	"1028"	"28"	"37.000"	"30.000"	"0.0899421197953074"	"14"	"0.0003839"	"0.002009"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNLVAIFDINR"	"[K].lDNLVAIFDINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"816.47015"	"1631.93303"	"1631.93182"	"0.74"	"0.00060"	"10/120"	"10"	"120"	"744949.01385498"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"87.7838"	"30198"	"30198"	"30183"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.7"	""	"53.7"	""	"55.6"	""	"65.4"	"1.1"	"68.0"	"69.8"	""	"1026"	"70"	"37.000"	"30.000"	"5.49689403586891E-06"	"21"	"0"	"7.663E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNLVAIFDINR"	"[K].lDNLVAIFDINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"544.64935"	"1631.93351"	"1631.93182"	"1.03"	"0.00056"	"11/120"	"11"	"120"	"333445.762084961"	"HCD"	"MS2"	"43.44184"	"4.9"	"100.000"	"87.5461"	"30108"	"30108"	"30091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"7.3"	""	"3.2"	""	"11.1"	""	"10.6"	"9.1"	""	"1009"	"45"	"37.000"	"30.000"	"0.00170161447218399"	"24"	"0.0001308"	"0.0002231"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASQLQDSLK"	"[R].aLASQLQDSLk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8415"	"0.0000"	"1"	"1"	"1"	"816.49017"	"1631.97307"	"1631.97324"	"-0.11"	"-0.00009"	"10/102"	"10"	"102"	"9853826.02172852"	"HCD"	"MS2"	"0"	"674.7"	"100.000"	"47.2461"	"13721"	"13721"	"13704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1061.2"	""	"741.9"	""	"771.5"	""	"1199.6"	"2.1"	"1273.8"	"1346.6"	""	"806"	"82"	"36.000"	"29.000"	"2.44514740824168E-07"	""	"0"	"2.442E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSLIDVNQSK"	"[K].iGSLIDVNQSk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q27W02"	"Protein mago nashi homolog OS=Rattus norvegicus OX=10116 GN=Magoh PE=2 SV=1"	"Q27W02"	"Protein mago nashi homolog OS=Rattus norvegicus OX=10116 GN=Magoh PE=2 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"816.49023"	"1631.97319"	"1631.97324"	"-0.03"	"-0.00002"	"13/100"	"13"	"100"	"432644.465026855"	"HCD"	"MS2"	"0"	"44.9"	"100.000"	"51.1268"	"15349"	"15349"	"15318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.1"	""	"45.1"	""	"43.3"	""	"80.3"	""	"97.9"	"108.4"	""	"806"	"24"	"36.000"	"29.000"	"0.147674342583077"	"16"	"0.0001308"	"0.0002366"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASQLQDSLK"	"[R].aLASQLQDSLk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8415"	"0.0000"	"1"	"1"	"1"	"816.49030"	"1631.97331"	"1631.97324"	"0.04"	"0.00004"	"10/102"	"10"	"102"	"10075575.0167847"	"HCD"	"MS2"	"0.8870065"	"403.7"	"98.412"	"47.5443"	"13891"	"13891"	"13874"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"607.4"	""	"481.5"	""	"513.9"	""	"674.0"	"0.7"	"762.7"	"789.3"	""	"806"	"82"	"36.000"	"29.000"	"2.40051843842191E-07"	""	"0"	"1.202E-05"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASQLQDSLK"	"[R].aLASQLQDSLk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"816.49042"	"1631.97356"	"1631.97324"	"0.19"	"0.00016"	"16/102"	"16"	"102"	"607785.281982422"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"47.5866"	"13860"	"13860"	"13832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.8"	""	"64.1"	""	"68.0"	""	"94.4"	""	"110.2"	"113.6"	""	"803"	"47"	"36.000"	"29.000"	"0.000768573753895966"	"20"	"0"	"8.085E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSLIDVNQSK"	"[K].iGSLIDVNQSk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q27W02"	"Protein mago nashi homolog OS=Rattus norvegicus OX=10116 GN=Magoh PE=2 SV=1"	"Q27W02"	"Protein mago nashi homolog OS=Rattus norvegicus OX=10116 GN=Magoh PE=2 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"816.49048"	"1631.97368"	"1631.97324"	"0.27"	"0.00022"	"14/100"	"14"	"100"	"401084.190734863"	"HCD"	"MS2"	"0"	"42.0"	"100.000"	"50.9265"	"15217"	"15217"	"15186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.8"	""	"37.7"	""	"45.3"	""	"79.0"	"2.8"	"86.3"	"91.6"	""	"803"	"47"	"36.000"	"29.000"	"0.000848565849494414"	"21"	"0"	"2.138E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLENEKK"	"[R].aLLENEkk.[K]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"544.68115"	"1632.02890"	"1632.02992"	"-0.62"	"-0.00034"	"5/66"	"5"	"66"	"42975430.3079834"	"HCD"	"MS2"	"15.02057"	"974.0"	"33.645"	"32.7299"	"7849"	"7849"	"7830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1709.8"	""	"1289.5"	""	"1216.4"	""	"1586.4"	""	"1639.5"	"1780.2"	""	"343"	"4"	"32.000"	"25.000"	"6.5503442449068"	"16"	"0.001058"	"0.01338"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ALLENEKK"	"[R].aLLENEkk.[K]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"816.51813"	"1632.02898"	"1632.02992"	"-0.58"	"-0.00047"	"5/66"	"5"	"66"	"414608.998291016"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"32.6688"	"7782"	"7782"	"7752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.0"	""	"46.7"	""	"48.8"	""	"67.0"	"0.9"	"55.0"	"75.5"	""	"343"	"27"	"32.000"	"25.000"	"0.032753983384411"	"19"	"0.0002723"	"0.001393"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IALENQKK"	"[].iALENqkk.[]"	"N-Term(TMT6plex); Q6(Deamidated); K7(TMT6plex); K8(TMT6plex)"	"0"	"0"	""	""	""	""	"1"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"816.51813"	"1632.02898"	"1632.02992"	"-0.58"	"-0.00047"	"5/62"	"5"	"62"	"414608.998291016"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"32.6688"	"7782"	"7782"	"7752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.0"	""	"46.7"	""	"48.8"	""	"67.0"	"0.9"	"55.0"	"75.5"	""	"343"	"27"	"32.000"	"25.000"	"0.032753983384411"	"19"	"0.001217"	"0.01683"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLENEKK"	"[R].aLLENEkk.[K]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"544.68127"	"1632.02927"	"1632.02992"	"-0.40"	"-0.00022"	"5/66"	"5"	"66"	"25361511.3543091"	"HCD"	"MS2"	"16.50939"	"1480.8"	"83.135"	"32.6092"	"7757"	"7757"	"7736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2714.5"	""	"1933.7"	""	"1829.1"	""	"2473.0"	""	"2417.6"	"2638.2"	""	"343"	"8"	"32.000"	"25.000"	"2.83311448396276"	"17"	"0.0006037"	"0.005619"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLELHYQAFLR"	"[R].nLELHYQAFLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"544.97308"	"1632.90470"	"1632.90594"	"-0.76"	"-0.00041"	"7/100"	"7"	"100"	"5520346.2399292"	"HCD"	"MS2"	"5.575444"	"118.3"	"100.000"	"48.3072"	"14155"	"14155"	"14128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.7"	""	"183.6"	""	"185.5"	""	"166.6"	""	"205.8"	"223.4"	""	"1086"	"36"	"37.000"	"30.000"	"0.0123253661457292"	"24"	"0"	"6.242E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLELHYQAFLR"	"[R].nLELHYQAFLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"544.97357"	"1632.90616"	"1632.90594"	"0.13"	"0.00007"	"5/100"	"5"	"100"	"5648740.75421143"	"HCD"	"MS2"	"29.80036"	"117.7"	"100.000"	"48.5730"	"14311"	"14311"	"14287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.6"	""	"172.1"	""	"183.4"	""	"171.6"	""	"215.9"	"210.8"	""	"1105"	"27"	"37.000"	"30.000"	"0.119215378605685"	"30"	"0"	"3.054E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSSTESYLK"	"[R].iFSSTESYLk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q56A27"	"Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus OX=10116 GN=Ncbp1 PE=1 SV=1"	"Q56A27"	"Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus OX=10116 GN=Ncbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"816.96655"	"1632.92583"	"1632.92489"	"0.57"	"0.00047"	"16/80"	"16"	"80"	"941475.912963867"	"HCD"	"MS2"	"0"	"93.5"	"100.000"	"54.3847"	"16663"	"16663"	"16637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.6"	""	"108.6"	""	"123.4"	""	"156.5"	"0.1"	"182.4"	"187.4"	""	"1079"	"37"	"37.000"	"30.000"	"0.0114285583246657"	"20"	"0"	"3.341E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFSSTESYLK"	"[R].iFSSTESYLk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q56A27"	"Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus OX=10116 GN=Ncbp1 PE=1 SV=1"	"Q56A27"	"Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus OX=10116 GN=Ncbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"816.96753"	"1632.92778"	"1632.92489"	"1.77"	"0.00144"	"8/80"	"8"	"80"	"798252.205322266"	"HCD"	"MS2"	"0"	"80.8"	"100.000"	"54.1326"	"16507"	"16507"	"16477"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.7"	""	"102.7"	""	"97.4"	""	"127.9"	""	"173.7"	"170.5"	""	"1054"	"27"	"37.000"	"30.000"	"0.110105906096008"	"15"	"0.0001308"	"0.0002055"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALIGSPVDLTYR"	"[K].vALIGSPVDLTYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"816.97888"	"1632.95049"	"1632.95222"	"-1.06"	"-0.00087"	"14/106"	"14"	"106"	"1375069.03686523"	"HCD"	"MS2"	"19.5536"	"85.6"	"100.000"	"62.1533"	"19832"	"19832"	"19811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.6"	""	"102.3"	""	"101.0"	""	"147.4"	"6.0"	"179.3"	"177.4"	""	"909"	"37"	"36.000"	"29.000"	"0.00870029317922083"	"18"	"0.0001308"	"0.0002721"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALIGSPVDLTYR"	"[K].vALIGSPVDLTYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.97925"	"1632.95122"	"1632.95222"	"-0.61"	"-0.00050"	"9/106"	"9"	"106"	"798386.463806152"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"62.0814"	"19750"	"19750"	"19721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.2"	""	"58.6"	""	"65.8"	""	"110.2"	"3.4"	"109.8"	"121.2"	""	"936"	"37"	"36.000"	"29.000"	"0.00910428518199406"	"15"	"0"	"0.0001798"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAIPHPLIMGVIR"	"[K].sAIPHPLIMGVIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"544.99823"	"1632.98014"	"1632.98208"	"-1.19"	"-0.00065"	"6/96"	"6"	"96"	"4401423.91687012"	"HCD"	"MS2"	"4.949166"	"96.3"	"100.000"	"48.4122"	"14245"	"14245"	"14226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.7"	""	"134.4"	""	"130.1"	""	"154.2"	"1.4"	"175.6"	"174.9"	""	"715"	"37"	"35.000"	"28.000"	"0.00701901298968886"	"16"	"0"	"0.0001643"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIYTPGSTVFYR"	"[K].tIYTPGSTVFYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"817.44299"	"1633.87871"	"1633.87872"	"-0.01"	"-0.00001"	"11/102"	"11"	"102"	"4907974.30224609"	"HCD"	"MS2"	"13.7552"	"231.2"	"100.000"	"48.6120"	"14327"	"14327"	"14303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"406.5"	""	"382.4"	""	"274.3"	""	"405.3"	""	"353.6"	"364.0"	""	"1086"	"41"	"37.000"	"30.000"	"0.00430328222450897"	"17"	"0"	"0.0001593"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIYTPGSTVFYR"	"[K].tIYTPGSTVFYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"545.29785"	"1633.87900"	"1633.87872"	"0.17"	"0.00009"	"9/102"	"9"	"102"	"5253359.71881104"	"HCD"	"MS2"	"10.25989"	"90.9"	"100.000"	"48.5394"	"14250"	"14250"	"14224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.0"	""	"130.0"	""	"124.7"	""	"135.4"	"6.8"	"154.5"	"167.5"	""	"1086"	"30"	"37.000"	"30.000"	"0.0541751134655647"	"18"	"0.0001859"	"0.0003743"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIYTPGSTVFYR"	"[K].tIYTPGSTVFYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"817.44342"	"1633.87956"	"1633.87872"	"0.51"	"0.00042"	"11/102"	"11"	"102"	"4638277.69885254"	"HCD"	"MS2"	"0"	"234.2"	"100.000"	"48.3255"	"14162"	"14162"	"14144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"402.8"	""	"369.3"	""	"278.4"	""	"402.7"	"2.5"	"360.8"	"397.0"	""	"1068"	"45"	"37.000"	"30.000"	"0.00155790602547662"	"20"	"0"	"0.0001429"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIYTPGSTVFYR"	"[K].tIYTPGSTVFYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"817.44342"	"1633.87956"	"1633.87872"	"0.51"	"0.00042"	"10/102"	"10"	"102"	"4390569.25750732"	"HCD"	"MS2"	"0"	"262.8"	"100.000"	"48.6314"	"14288"	"14288"	"14271"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"470.7"	""	"446.9"	""	"296.8"	""	"368.5"	""	"439.7"	"465.8"	""	"1068"	"16"	"37.000"	"30.000"	"1.28688949891864"	"14"	"0.0001859"	"0.0003486"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIYTPGSTVFYR"	"[K].tIYTPGSTVFYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"545.29810"	"1633.87973"	"1633.87872"	"0.62"	"0.00034"	"9/102"	"9"	"102"	"7651656.31732178"	"HCD"	"MS2"	"27.5702"	"99.4"	"100.000"	"48.7593"	"14387"	"14387"	"14367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.7"	""	"136.3"	""	"127.1"	""	"150.5"	"5.1"	"183.7"	"169.4"	""	"1074"	"48"	"37.000"	"30.000"	"0.000931052746793973"	"22"	"0"	"0.000164"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIYTPGSTVFYR"	"[K].tIYTPGSTVFYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"817.44360"	"1633.87993"	"1633.87872"	"0.74"	"0.00060"	"11/102"	"11"	"102"	"3509709.94641113"	"HCD"	"MS2"	"0"	"179.6"	"100.000"	"48.9106"	"14449"	"14449"	"14431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"315.9"	""	"283.1"	""	"213.4"	""	"284.9"	"9.6"	"309.1"	"283.2"	""	"1072"	"44"	"37.000"	"30.000"	"0.00234511848364823"	"19"	"0"	"5.02E-06"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYVTIIDAPGHR"	"[K].yYVTIIDAPGHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.9038"	"0.0000"	"1"	"1"	"1"	"545.30029"	"1633.88633"	"1633.88996"	"-2.22"	"-0.00121"	"11/94"	"11"	"94"	"14115439.2370605"	"HCD"	"MS2"	"12.66015"	"169.0"	"57.015"	"41.1074"	"11228"	"11228"	"11205"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"211.2"	""	"232.2"	""	"223.0"	""	"251.6"	"2.7"	"334.6"	"348.5"	""	"1064"	"52"	"37.000"	"30.000"	"0.000322041345369082"	"20"	"0"	"0.0001182"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYVTIIDAPGHR"	"[K].yYVTIIDAPGHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"545.30048"	"1633.88687"	"1633.88996"	"-1.89"	"-0.00103"	"13/94"	"13"	"94"	"11943513.4215698"	"HCD"	"MS2"	"7.78188"	"290.2"	"100.000"	"41.3068"	"11354"	"11354"	"11325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"345.7"	""	"368.3"	""	"408.6"	""	"461.0"	"9.3"	"593.4"	"568.0"	""	"1064"	"44"	"37.000"	"30.000"	"0.0021573054085854"	"21"	"0"	"7.281E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LASTQQSLAEK"	"[].lASTQQSLAEk.[]"	"N-Term(TMT6plex); K11(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"4"	"545.32098"	"1633.94840"	"1633.95251"	"-2.51"	"-0.00137"	"7/106"	"7"	"106"	"437427.717041016"	"HCD"	"MS2"	"43.78608"	"19.1"	"100.000"	"83.6221"	"28523"	"28523"	"28492"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.7"	""	"28.3"	""	"25.2"	""	"34.0"	""	"27.7"	"34.9"	""	"894"	"7"	"36.000"	"29.000"	"8.83705429130002"	"16"	"0.002953"	"0.05222"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTFYYLIK"	"[K].dLTFYYLIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"545.32385"	"1633.95700"	"1633.96055"	"-2.17"	"-0.00118"	"7/68"	"7"	"68"	"5012665.57049561"	"HCD"	"MS2"	"13.81135"	"123.1"	"100.000"	"76.5954"	"25711"	"25711"	"25703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.8"	""	"277.1"	""	"163.7"	""	"209.7"	""	"163.0"	"137.6"	""	"847"	"37"	"36.000"	"29.000"	"0.00806962614057435"	"25"	"0.0001889"	"0.0004662"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTFYYLIK"	"[K].dLTFYYLIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"545.32440"	"1633.95865"	"1633.96055"	"-1.16"	"-0.00063"	"7/68"	"7"	"68"	"2545754.89953613"	"HCD"	"MS2"	"0"	"63.1"	"100.000"	"76.9267"	"25791"	"25791"	"25773"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.3"	""	"127.2"	""	"94.1"	""	"97.3"	"0.8"	"91.1"	"80.8"	""	"845"	"37"	"36.000"	"29.000"	"0.00810637542933196"	"25"	"0.0001859"	"0.0003591"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNNDIMLIK"	"[K].tLnNDIMLIk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"1"	"P00763"	"Anionic trypsin-2 OS=Rattus norvegicus OX=10116 GN=Prss2 PE=1 SV=2"	"P00763"	"Anionic trypsin-2 OS=Rattus norvegicus OX=10116 GN=Prss2 PE=1 SV=2"	"0"	"2"	"2"	"0.2540"	"0.0000"	"1"	"1"	"1"	"817.48303"	"1633.95879"	"1633.95990"	"-0.68"	"-0.00056"	"9/94"	"9"	"94"	"3655012.04876709"	"HCD"	"MS2"	"0"	"297.7"	"100.000"	"60.8971"	"19319"	"19319"	"19299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.3"	""	"155.8"	""	"165.6"	""	"681.8"	""	"883.5"	"834.6"	""	"847"	"63"	"36.000"	"29.000"	"2.23281846312565E-05"	""	"0"	"5.005E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTFYYLIK"	"[K].dLTFYYLIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"545.32446"	"1633.95884"	"1633.96055"	"-1.05"	"-0.00057"	"7/68"	"7"	"68"	"3725212.03881836"	"HCD"	"MS2"	"34.87401"	"92.6"	"100.000"	"76.6199"	"25671"	"25671"	"25661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.5"	""	"202.8"	""	"122.4"	""	"145.4"	"1.3"	"127.1"	"111.7"	""	"847"	"37"	"36.000"	"29.000"	"0.00823859994567198"	"25"	"0.0001889"	"0.0004487"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTFYYLIK"	"[K].dLTFYYLIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"545.32489"	"1633.96012"	"1633.96055"	"-0.27"	"-0.00015"	"7/68"	"7"	"68"	"2087779.08685303"	"HCD"	"MS2"	"0"	"54.3"	"100.000"	"76.9050"	"25833"	"25833"	"25815"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.5"	""	"113.9"	""	"77.9"	""	"92.8"	""	"73.9"	"68.5"	""	"801"	"34"	"36.000"	"29.000"	"0.0142430343086878"	"22"	"0.0001889"	"0.0004181"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNNDIMLIK"	"[K].tLnNDIMLIk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"1"	"P00763"	"Anionic trypsin-2 OS=Rattus norvegicus OX=10116 GN=Prss2 PE=1 SV=2"	"P00763"	"Anionic trypsin-2 OS=Rattus norvegicus OX=10116 GN=Prss2 PE=1 SV=2"	"0"	"2"	"2"	"0.2542"	"0.0000"	"1"	"1"	"1"	"817.48370"	"1633.96013"	"1633.95990"	"0.14"	"0.00011"	"9/94"	"9"	"94"	"3047024.13708496"	"HCD"	"MS2"	"5.570801"	"254.3"	"100.000"	"60.7310"	"19198"	"19198"	"19177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.5"	""	"130.2"	""	"143.8"	""	"586.9"	"4.1"	"772.5"	"660.2"	""	"801"	"59"	"36.000"	"29.000"	"4.85962234611223E-05"	""	"0"	"2.171E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTFYYLIK"	"[K].dLTFYYLIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"817.48401"	"1633.96074"	"1633.96055"	"0.12"	"0.00009"	"8/68"	"8"	"68"	"7053558.47540283"	"HCD"	"MS2"	"27.27425"	"518.1"	"100.000"	"76.6433"	"25729"	"25729"	"25722"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"912.9"	""	"1157.4"	""	"657.5"	""	"863.1"	""	"685.7"	"608.2"	""	"811"	"66"	"36.000"	"29.000"	"1.14022578672677E-05"	"24"	"0"	"0.000116"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTFYYLIK"	"[K].dLTFYYLIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"817.48425"	"1633.96123"	"1633.96055"	"0.41"	"0.00034"	"7/68"	"7"	"68"	"1128061.65197754"	"HCD"	"MS2"	"18.36384"	"96.8"	"100.000"	"76.9441"	"25849"	"25849"	"25829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.0"	""	"191.5"	""	"136.0"	""	"152.4"	""	"134.0"	"128.5"	""	"805"	"53"	"36.000"	"29.000"	"0.000183554858670397"	"26"	"0"	"5.879E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTFYYLIK"	"[K].dLTFYYLIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"817.48438"	"1633.96147"	"1633.96055"	"0.56"	"0.00046"	"16/68"	"16"	"68"	"7789870.42858887"	"HCD"	"MS2"	"18.17836"	"576.8"	"100.000"	"76.7205"	"25709"	"25709"	"25699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1005.9"	""	"1325.6"	""	"747.2"	""	"928.4"	"3.3"	"759.6"	"666.4"	""	"805"	"52"	"36.000"	"29.000"	"0.000283638960259277"	"25"	"0.0001308"	"0.000239"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTFYYLIK"	"[K].dLTFYYLIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"817.48547"	"1633.96367"	"1633.96055"	"1.91"	"0.00156"	"16/68"	"16"	"68"	"697792.998413086"	"HCD"	"MS2"	"35.87777"	"61.6"	"100.000"	"77.0398"	"25837"	"25837"	"25817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.5"	""	"125.2"	""	"77.1"	""	"102.6"	"1.4"	"85.6"	"87.8"	""	"828"	"53"	"36.000"	"29.000"	"0.000218776334234924"	"26"	"0"	"2.89E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DRPFFPGLVK"	"[K].dRPFFPGLVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"4"	"4"	"0.3333"	"0.0000"	"1"	"1"	"1"	"409.25085"	"1633.98159"	"1633.98302"	"-0.88"	"-0.00036"	"10/88"	"10"	"88"	"2733469.60089111"	"HCD"	"MS2"	"0"	"127.4"	"100.000"	"47.4348"	"13798"	"13798"	"13768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.9"	""	"154.2"	""	"175.6"	""	"207.6"	""	"248.3"	"255.5"	""	"652"	"9"	"35.000"	"28.000"	"3.67466370713216"	"19"	"0"	"0.0001578"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DRPFFPGLVK"	"[K].dRPFFPGLVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"545.33264"	"1633.98337"	"1633.98302"	"0.22"	"0.00012"	"8/88"	"8"	"88"	"70265880.0319824"	"HCD"	"MS2"	"16.28858"	"627.1"	"24.589"	"47.3246"	"13753"	"13753"	"13736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"877.5"	""	"748.1"	""	"798.9"	""	"1166.7"	"1.2"	"1118.3"	"1232.1"	""	"664"	"21"	"35.000"	"28.000"	"0.273613854184317"	"17"	"0.0001308"	"0.0002761"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DRPFFPGLVK"	"[K].dRPFFPGLVk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"545.33270"	"1633.98355"	"1633.98302"	"0.33"	"0.00018"	"8/88"	"8"	"88"	"85585173.7023926"	"HCD"	"MS2"	"11.99594"	"518.0"	"17.002"	"47.6272"	"13924"	"13924"	"13906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"729.4"	""	"611.0"	""	"655.6"	""	"962.0"	""	"938.4"	"1014.8"	""	"650"	"21"	"35.000"	"28.000"	"0.2811145736021"	"17"	"0.0001859"	"0.0003402"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYYSGVDLTK"	"[K].mYYSGVDLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"817.94653"	"1634.88579"	"1634.88640"	"-0.37"	"-0.00031"	"9/82"	"9"	"82"	"7542263.65563965"	"HCD"	"MS2"	"21.88441"	"570.5"	"100.000"	"49.0238"	"14496"	"14496"	"14479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"983.1"	""	"973.2"	""	"700.2"	""	"607.0"	"4.2"	"1089.1"	"1046.6"	""	"1045"	"62"	"37.000"	"30.000"	"3.05552818965491E-05"	"23"	"0"	"8.985E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYYSGVDLTK"	"[K].mYYSGVDLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"817.94684"	"1634.88640"	"1634.88640"	"0.00"	"0.00000"	"9/82"	"9"	"82"	"7496038.26416016"	"HCD"	"MS2"	"18.69445"	"605.7"	"100.000"	"48.7531"	"14337"	"14337"	"14319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1039.4"	""	"1066.3"	""	"727.8"	""	"638.1"	"13.1"	"1119.5"	"1131.7"	""	"1053"	"62"	"37.000"	"30.000"	"3.00883502207738E-05"	"23"	"0"	"4.103E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYYSGVDLTK"	"[K].mYYSGVDLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"817.94720"	"1634.88713"	"1634.88640"	"0.45"	"0.00037"	"9/82"	"9"	"82"	"520987.876220703"	"HCD"	"MS2"	"16.05338"	"54.7"	"100.000"	"49.0935"	"14477"	"14477"	"14447"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.5"	""	"78.4"	""	"72.9"	""	"79.4"	"0.1"	"96.9"	"102.1"	""	"1056"	"37"	"37.000"	"30.000"	"0.00960802053346072"	"15"	"0"	"0.0001509"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYYSGVDLTK"	"[K].mYYSGVDLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"545.63428"	"1634.88828"	"1634.88640"	"1.15"	"0.00063"	"7/82"	"7"	"82"	"11814345.8026733"	"HCD"	"MS2"	"19.16472"	"235.9"	"100.000"	"48.9570"	"14468"	"14468"	"14447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.7"	""	"352.0"	""	"285.6"	""	"262.4"	""	"446.0"	"519.2"	""	"1058"	"18"	"37.000"	"30.000"	"0.764637638724595"	"19"	"0.003262"	"0.06777"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYYSGVDLTK"	"[K].mYYSGVDLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"545.63440"	"1634.88864"	"1634.88640"	"1.37"	"0.00075"	"7/82"	"7"	"82"	"12157432.1075439"	"HCD"	"MS2"	"21.23974"	"260.1"	"100.000"	"48.6867"	"14310"	"14310"	"14287"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"402.3"	""	"402.8"	""	"301.9"	""	"305.3"	"6.3"	"481.3"	"566.3"	""	"1058"	"26"	"37.000"	"30.000"	"0.134108304553339"	"19"	"0.001783"	"0.025"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWEQIDQMK"	"[K].vWEQIDQMk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"817.95343"	"1634.89958"	"1634.89763"	"1.19"	"0.00097"	"8/80"	"8"	"80"	"1482362.04351807"	"HCD"	"MS2"	"40.28116"	"79.0"	"100.000"	"55.5781"	"17098"	"17098"	"17067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.1"	""	"106.2"	""	"107.3"	""	"115.6"	""	"157.5"	"164.5"	""	"1020"	"13"	"37.000"	"30.000"	"2.32043910676525"	"16"	"0.0001889"	"0.0004278"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLMYGPPGTGK"	"[K].gVLMYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"817.96857"	"1634.92986"	"1634.93402"	"-2.55"	"-0.00208"	"10/88"	"10"	"88"	"833563.370178223"	"HCD"	"MS2"	"0"	"63.7"	"100.000"	"45.5837"	"13094"	"13094"	"13067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.2"	""	"103.1"	""	"81.6"	""	"70.1"	"0.8"	"116.0"	"131.5"	""	"945"	"61"	"36.000"	"29.000"	"4.21116068268194E-05"	"24"	"0"	"8.933E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLMYGPPGTGK"	"[K].gVLMYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"817.96936"	"1634.93144"	"1634.93402"	"-1.58"	"-0.00129"	"10/88"	"10"	"88"	"1460640.90881348"	"HCD"	"MS2"	"100"	"107.3"	"100.000"	"45.4181"	"12976"	"12976"	"12967"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.9"	""	"143.5"	""	"162.5"	""	"118.1"	""	"208.6"	"210.9"	""	"927"	"52"	"36.000"	"29.000"	"0.000293122893112878"	"18"	"0"	"3.343E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLMYGPPGTGK"	"[K].gVLMYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"545.64886"	"1634.93204"	"1634.93402"	"-1.21"	"-0.00066"	"10/88"	"10"	"88"	"4098489.98339844"	"HCD"	"MS2"	"54.68204"	"139.9"	"100.000"	"45.4868"	"13003"	"13003"	"12988"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.7"	""	"202.8"	""	"186.9"	""	"199.9"	"2.6"	"258.2"	"262.2"	""	"924"	"33"	"36.000"	"29.000"	"0.02315485019358"	"23"	"0"	"0.0001163"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLMYGPPGTGK"	"[K].gVLMYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"817.97021"	"1634.93315"	"1634.93402"	"-0.53"	"-0.00043"	"15/88"	"15"	"88"	"786305.536682129"	"HCD"	"MS2"	"100"	"67.7"	"100.000"	"45.9022"	"13220"	"13220"	"13203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.4"	""	"84.9"	""	"85.6"	""	"84.2"	""	"135.3"	"142.9"	""	"913"	"32"	"36.000"	"29.000"	"0.0274435811161116"	"15"	"0"	"9.861E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLMYGPPGTGK"	"[K].gVLMYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"545.64935"	"1634.93351"	"1634.93402"	"-0.31"	"-0.00017"	"10/88"	"10"	"88"	"4212215.78875732"	"HCD"	"MS2"	"0"	"136.2"	"100.000"	"45.7715"	"13168"	"13168"	"13154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.7"	""	"191.7"	""	"194.5"	""	"199.0"	"1.0"	"254.9"	"266.2"	""	"913"	"29"	"36.000"	"29.000"	"0.0532648590188329"	"25"	"7.476E-05"	"0.000203"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPLPFPFPSK"	"[R].fPLPFPFPSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H58"	"Integrator complex subunit 14 OS=Rattus norvegicus OX=10116 GN=Ints14 PE=2 SV=1"	"Q66H58"	"Integrator complex subunit 14 OS=Rattus norvegicus OX=10116 GN=Ints14 PE=2 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"545.66241"	"1634.97269"	"1634.97106"	"1.00"	"0.00054"	"8/72"	"8"	"72"	"294505.591247559"	"HCD"	"MS2"	"13.834"	"11.6"	"100.000"	"84.3019"	"28800"	"28800"	"28772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.7"	""	"14.9"	""	"12.7"	""	"20.8"	""	"23.3"	"25.7"	""	"759"	"22"	"35.000"	"28.000"	"0.235077887991639"	"17"	"0.0001859"	"0.0003529"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDVLELAEK"	"[K].fLDVLELAEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"545.66302"	"1634.97452"	"1634.97693"	"-1.47"	"-0.00080"	"10/84"	"10"	"84"	"275304.188720703"	"HCD"	"MS2"	"12.08086"	"12.2"	"100.000"	"84.0844"	"28762"	"28762"	"28738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.1"	""	"12.9"	""	"21.4"	""	"21.2"	""	"21.2"	"25.8"	""	"741"	"29"	"35.000"	"28.000"	"0.0472920578664603"	"15"	"0.0001889"	"0.0005757"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLLEELVAK"	"[K].fDLLEELVAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AY04"	"m-AAA protease-interacting protein 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Maip1 PE=2 SV=1"	"Q6AY04"	"m-AAA protease-interacting protein 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Maip1 PE=2 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"817.99109"	"1634.97490"	"1634.97693"	"-1.24"	"-0.00101"	"7/80"	"7"	"80"	"75185.17578125"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"92.1951"	"31831"	"31831"	"31824"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"5.1"	""	"4.7"	""	"9.4"	""	"8.2"	"10.4"	""	"734"	"17"	"35.000"	"28.000"	"0.684961346536324"	"20"	"0.00103"	"0.01229"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDVLELAEK"	"[K].fLDVLELAEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"817.99176"	"1634.97624"	"1634.97693"	"-0.42"	"-0.00034"	"9/84"	"9"	"84"	"614173.067871094"	"HCD"	"MS2"	"0"	"50.3"	"100.000"	"83.6998"	"28605"	"28605"	"28587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.7"	""	"58.4"	""	"60.0"	""	"89.1"	"1.6"	"95.0"	"116.7"	""	"671"	"59"	"35.000"	"28.000"	"3.79046529372724E-05"	"22"	"0"	"9.031E-06"	"1.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDVLELAEK"	"[K].fLDVLELAEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"545.66364"	"1634.97635"	"1634.97693"	"-0.35"	"-0.00019"	"11/84"	"11"	"84"	"885566.52154541"	"HCD"	"MS2"	"47.60788"	"31.7"	"100.000"	"83.6906"	"28602"	"28602"	"28571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.3"	""	"41.0"	""	"43.9"	""	"58.1"	"0.3"	"48.6"	"67.9"	""	"672"	"47"	"35.000"	"28.000"	"0.000607210506339671"	"25"	"0.0001889"	"0.0005035"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDVLELAEK"	"[K].fLDVLELAEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"817.99188"	"1634.97649"	"1634.97693"	"-0.27"	"-0.00022"	"14/84"	"14"	"84"	"419563.863098145"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"83.9991"	"28727"	"28727"	"28709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.6"	""	"38.8"	""	"41.2"	""	"55.6"	"1.4"	"65.4"	"65.9"	""	"673"	"48"	"35.000"	"28.000"	"0.000571458989053376"	"20"	"0"	"1.155E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDVLELAEK"	"[K].fLDVLELAEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"545.66370"	"1634.97654"	"1634.97693"	"-0.24"	"-0.00013"	"9/84"	"9"	"84"	"648175.424621582"	"HCD"	"MS2"	"13.5463"	"19.0"	"100.000"	"83.9721"	"28665"	"28665"	"28644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.8"	""	"25.4"	""	"24.5"	""	"31.0"	""	"40.3"	"40.7"	""	"673"	"32"	"35.000"	"28.000"	"0.0215270772139911"	"23"	"0.0001889"	"0.0004777"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDVLELAEK"	"[K].fLDVLELAEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"817.99200"	"1634.97673"	"1634.97693"	"-0.12"	"-0.00010"	"14/84"	"14"	"84"	"397119.058532715"	"HCD"	"MS2"	"0"	"32.8"	"100.000"	"83.9651"	"28662"	"28662"	"28644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.1"	""	"32.3"	""	"44.8"	""	"61.9"	"0.9"	"64.5"	"68.8"	""	"671"	"47"	"35.000"	"28.000"	"0.00061615861419337"	"21"	"0"	"1.742E-05"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDVLELAEK"	"[K].fLDVLELAEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"545.66400"	"1634.97745"	"1634.97693"	"0.32"	"0.00017"	"11/84"	"11"	"84"	"864326.127624512"	"HCD"	"MS2"	"39.40455"	"32.1"	"100.000"	"83.6521"	"28535"	"28535"	"28508"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.1"	""	"42.0"	""	"39.5"	""	"60.8"	"0.0"	"53.7"	"68.1"	""	"672"	"44"	"35.000"	"28.000"	"0.00147685982787109"	"25"	"0.0001859"	"0.00034"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDVLELAEK"	"[K].fLDVLELAEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"817.99268"	"1634.97807"	"1634.97693"	"0.70"	"0.00057"	"15/84"	"15"	"84"	"518845.036743164"	"HCD"	"MS2"	"0"	"44.6"	"100.000"	"83.6430"	"28531"	"28531"	"28508"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.1"	""	"59.2"	""	"48.3"	""	"81.3"	""	"85.1"	"92.9"	""	"684"	"51"	"35.000"	"28.000"	"0.000293782624354845"	"20"	"0"	"1.827E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFVAIVQSVK"	"[K].dAFVAIVQSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"817.99426"	"1634.98125"	"1634.98816"	"-4.23"	"-0.00346"	"18/102"	"18"	"102"	"2427574.76971436"	"HCD"	"MS2"	"0"	"155.4"	"100.000"	"67.0702"	"21787"	"21787"	"21769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.5"	""	"202.7"	""	"229.7"	""	"280.2"	""	"283.2"	"292.3"	""	"653"	"42"	"35.000"	"28.000"	"0.00223297152837387"	"23"	"0"	"4.191E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFVAIVQSVK"	"[K].dAFVAIVQSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"817.99469"	"1634.98210"	"1634.98816"	"-3.71"	"-0.00303"	"17/102"	"17"	"102"	"2666879.25384521"	"HCD"	"MS2"	"14.88248"	"162.6"	"100.000"	"67.3327"	"21939"	"21939"	"21925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.0"	""	"196.8"	""	"212.0"	""	"291.5"	""	"329.0"	"320.2"	""	"641"	"65"	"35.000"	"28.000"	"9.99604111702107E-06"	"22"	"0"	"2.573E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFVAIVQSVK"	"[K].dAFVAIVQSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"545.66687"	"1634.98606"	"1634.98816"	"-1.29"	"-0.00070"	"12/102"	"12"	"102"	"6520943.0668335"	"HCD"	"MS2"	"0"	"149.0"	"100.000"	"66.9708"	"21799"	"21799"	"21779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.8"	""	"202.0"	""	"214.9"	""	"261.9"	""	"278.3"	"284.6"	""	"627"	"44"	"34.000"	"27.000"	"0.00131291782664467"	"19"	"0"	"6.011E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFVAIVQSVK"	"[K].dAFVAIVQSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"545.66693"	"1634.98624"	"1634.98816"	"-1.18"	"-0.00064"	"11/102"	"11"	"102"	"8822384.72796631"	"HCD"	"MS2"	"3.367341"	"185.8"	"100.000"	"67.2568"	"21908"	"21908"	"21896"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.9"	""	"246.6"	""	"257.4"	""	"309.6"	"1.4"	"352.8"	"378.0"	""	"627"	"42"	"34.000"	"27.000"	"0.00221430553261439"	"18"	"0"	"5.203E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFVAIVQSVK"	"[K].dAFVAIVQSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"545.66705"	"1634.98661"	"1634.98816"	"-0.95"	"-0.00052"	"12/102"	"12"	"102"	"7560323.55706787"	"HCD"	"MS2"	"3.179518"	"192.2"	"100.000"	"67.3519"	"21899"	"21899"	"21885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"214.3"	""	"256.0"	""	"268.5"	""	"325.3"	""	"372.4"	"392.0"	""	"627"	"36"	"34.000"	"27.000"	"0.00859483502899391"	"23"	"7.476E-05"	"0.0001933"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENIFAIQTLK"	"[R].eNIFAIQTLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z1Z3"	"Epsin-2 OS=Rattus norvegicus OX=10116 GN=Epn2 PE=1 SV=1"	"Q9Z1Z3"	"Epsin-2 OS=Rattus norvegicus OX=10116 GN=Epn2 PE=1 SV=1"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"817.99707"	"1634.98686"	"1634.98816"	"-0.80"	"-0.00065"	"9/102"	"9"	"102"	"1016440.55004883"	"HCD"	"MS2"	"16.27705"	"99.6"	"100.000"	"60.5972"	"19144"	"19144"	"19113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.4"	""	"108.2"	""	"127.9"	""	"187.1"	""	"199.2"	"202.3"	""	"611"	"57"	"34.000"	"27.000"	"6.54653078642178E-05"	""	"0"	"4.133E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGEQSVGK"	"[K].lVFLGEQSVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"817.99719"	"1634.98711"	"1634.98816"	"-0.65"	"-0.00053"	"9/92"	"9"	"92"	"1897978.67266846"	"HCD"	"MS2"	"6.638896"	"152.8"	"100.000"	"58.1741"	"18158"	"18158"	"18139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.1"	""	"203.5"	""	"219.7"	""	"240.8"	"3.3"	"285.3"	"311.3"	""	"616"	"64"	"34.000"	"27.000"	"1.10802795227969E-05"	"25"	"0"	"8.143E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFVAIVQSVK"	"[K].dAFVAIVQSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"817.99719"	"1634.98711"	"1634.98816"	"-0.65"	"-0.00053"	"18/102"	"18"	"102"	"4476823.21801758"	"HCD"	"MS2"	"0"	"287.5"	"100.000"	"67.3542"	"21900"	"21900"	"21885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"325.1"	""	"333.9"	""	"364.1"	""	"500.3"	""	"601.1"	"609.9"	""	"616"	"76"	"34.000"	"27.000"	"7.75444493749728E-07"	"24"	"0"	"1.602E-05"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFVAIVQSVK"	"[K].dAFVAIVQSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"545.66742"	"1634.98771"	"1634.98816"	"-0.28"	"-0.00015"	"10/102"	"10"	"102"	"6052545.55700684"	"HCD"	"MS2"	"8.289466"	"143.6"	"100.000"	"67.0772"	"21790"	"21790"	"21781"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.3"	""	"192.0"	""	"200.5"	""	"257.9"	"0.8"	"262.2"	"270.3"	""	"616"	"41"	"34.000"	"27.000"	"0.0025914970362672"	"19"	"0"	"7.42E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENIFAIQTLK"	"[R].eNIFAIQTLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z1Z3"	"Epsin-2 OS=Rattus norvegicus OX=10116 GN=Epn2 PE=1 SV=1"	"Q9Z1Z3"	"Epsin-2 OS=Rattus norvegicus OX=10116 GN=Epn2 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"817.99756"	"1634.98784"	"1634.98816"	"-0.20"	"-0.00016"	"8/102"	"8"	"102"	"979534.588928223"	"HCD"	"MS2"	"14.51525"	"95.1"	"100.000"	"60.7607"	"19264"	"19264"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.8"	""	"96.5"	""	"121.3"	""	"186.7"	""	"190.0"	"195.7"	""	"592"	"46"	"34.000"	"27.000"	"0.000726593839042769"	"24"	"0"	"6.684E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFLGEQSVGK"	"[K].lVFLGEQSVGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"817.99792"	"1634.98857"	"1634.98816"	"0.25"	"0.00020"	"9/92"	"9"	"92"	"2305094.63214111"	"HCD"	"MS2"	"15.51951"	"175.3"	"100.000"	"58.3247"	"18274"	"18274"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.4"	""	"251.9"	""	"238.9"	""	"282.9"	""	"339.2"	"351.8"	""	"592"	"61"	"34.000"	"27.000"	"2.51357420610749E-05"	"23"	"0"	"1.187E-05"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFVAIVQSVK"	"[K].dAFVAIVQSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9277"	"0.0000"	"1"	"1"	"1"	"817.99805"	"1634.98882"	"1634.98816"	"0.40"	"0.00033"	"10/102"	"10"	"102"	"3922448.42077637"	"HCD"	"MS2"	"0"	"248.3"	"100.000"	"67.0212"	"21820"	"21820"	"21806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.1"	""	"344.6"	""	"324.6"	""	"433.1"	"1.2"	"471.5"	"481.3"	""	"592"	"83"	"34.000"	"27.000"	"1.38768761114998E-07"	"24"	"0"	"2.208E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFVAIVQSVK"	"[K].dAFVAIVQSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.66785"	"1634.98899"	"1634.98816"	"0.50"	"0.00027"	"8/102"	"8"	"102"	"972418.162414551"	"HCD"	"MS2"	"9.549098"	"39.9"	"100.000"	"67.9752"	"22149"	"22149"	"22122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.4"	""	"50.1"	""	"57.9"	""	"69.2"	""	"78.1"	"81.1"	""	"592"	"4"	"34.000"	"27.000"	"11.4628262896799"	"13"	"0.0003571"	"0.00151"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFVAIVQSVK"	"[K].dAFVAIVQSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.66846"	"1634.99082"	"1634.98816"	"1.62"	"0.00088"	"7/102"	"7"	"102"	"876676.54864502"	"HCD"	"MS2"	"32.46689"	"34.4"	"100.000"	"67.8953"	"22168"	"22168"	"22138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.6"	""	"46.2"	""	"45.1"	""	"62.3"	"1.0"	"59.2"	"67.6"	""	"566"	"3"	"34.000"	"27.000"	"12.8170015112725"	"13"	"0.0006037"	"0.003802"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.03302"	"1635.05876"	"1635.06093"	"-1.33"	"-0.00109"	"9/92"	"9"	"92"	"823606.29888916"	"HCD"	"MS2"	"11.09488"	"50.8"	"100.000"	"56.2393"	"17368"	"17368"	"17339"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.7"	""	"68.8"	""	"61.2"	""	"84.7"	"0.6"	"101.6"	"109.5"	""	"129"	"52"	"28.000"	"21.000"	"4.47259644880687E-05"	"16"	"0.0001308"	"0.0003066"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.03326"	"1635.05925"	"1635.06093"	"-1.03"	"-0.00084"	"9/92"	"9"	"92"	"1321386.06231689"	"HCD"	"MS2"	"44.41563"	"71.8"	"100.000"	"55.6058"	"17109"	"17109"	"17083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.6"	""	"99.9"	""	"115.3"	""	"114.9"	"2.1"	"138.3"	"120.3"	""	"129"	"52"	"28.000"	"21.000"	"4.56625030927769E-05"	"16"	"0.0001889"	"0.0005276"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.03351"	"1635.05974"	"1635.06093"	"-0.73"	"-0.00060"	"10/92"	"10"	"92"	"1447380.94854736"	"HCD"	"MS2"	"11.76961"	"72.7"	"100.000"	"55.8925"	"17280"	"17280"	"17253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.8"	""	"96.6"	""	"94.3"	""	"118.2"	"1.7"	"152.3"	"144.6"	""	"124"	"53"	"27.000"	"20.000"	"3.07887239299208E-05"	"16"	"0"	"0.0001307"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.69165"	"1635.06040"	"1635.06093"	"-0.33"	"-0.00018"	"11/92"	"11"	"92"	"4678710.71594238"	"HCD"	"MS2"	"21.61474"	"119.2"	"100.000"	"56.0202"	"17278"	"17278"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.0"	""	"153.3"	""	"159.0"	""	"212.4"	""	"224.4"	"226.2"	""	"130"	"35"	"28.000"	"21.000"	"0.00223312666134919"	"15"	"0.0001889"	"0.0009455"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.03387"	"1635.06047"	"1635.06093"	"-0.28"	"-0.00023"	"10/92"	"10"	"92"	"1346863.78222656"	"HCD"	"MS2"	"13.2628"	"66.7"	"100.000"	"56.1985"	"17405"	"17405"	"17381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.3"	""	"91.0"	""	"93.4"	""	"107.5"	"1.2"	"125.9"	"134.6"	""	"130"	"53"	"28.000"	"21.000"	"3.0543117059339E-05"	"16"	"0.0001889"	"0.0003901"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"545.69177"	"1635.06076"	"1635.06093"	"-0.10"	"-0.00006"	"7/92"	"7"	"92"	"4934404.99938965"	"HCD"	"MS2"	"4.895165"	"117.0"	"100.000"	"55.9225"	"17292"	"17292"	"17269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.0"	""	"155.8"	""	"150.7"	""	"187.7"	""	"235.2"	"252.9"	""	"128"	"47"	"28.000"	"21.000"	"0.000116460854951039"	"17"	"0"	"6.597E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"545.69177"	"1635.06076"	"1635.06093"	"-0.10"	"-0.00006"	"12/92"	"12"	"92"	"2593342.47180176"	"HCD"	"MS2"	"45.05044"	"75.1"	"100.000"	"56.3547"	"17415"	"17415"	"17387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.2"	""	"103.4"	""	"110.4"	""	"126.4"	"1.5"	"133.9"	"147.0"	""	"128"	"39"	"28.000"	"21.000"	"0.000843684312676101"	"17"	"0"	"0.0001163"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.03418"	"1635.06108"	"1635.06093"	"0.09"	"0.00007"	"10/92"	"10"	"92"	"1300594.30407715"	"HCD"	"MS2"	"9.344616"	"66.4"	"100.000"	"55.9211"	"17238"	"17238"	"17211"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.2"	""	"74.2"	""	"89.7"	""	"114.1"	""	"133.3"	"143.6"	""	"128"	"27"	"28.000"	"21.000"	"0.0115925765927655"	"14"	"0.0001889"	"0.0009318"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.69208"	"1635.06168"	"1635.06093"	"0.46"	"0.00025"	"11/92"	"11"	"92"	"5064351.02044678"	"HCD"	"MS2"	"19.33929"	"123.7"	"100.000"	"56.2329"	"17419"	"17419"	"17397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.6"	""	"151.0"	""	"179.5"	""	"222.9"	""	"230.8"	"232.9"	""	"128"	"34"	"28.000"	"21.000"	"0.00258928570686363"	"15"	"0.0001889"	"0.0009737"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"545.69214"	"1635.06186"	"1635.06093"	"0.57"	"0.00031"	"12/92"	"12"	"92"	"4992692.44055176"	"HCD"	"MS2"	"5.435277"	"115.1"	"100.000"	"55.7117"	"17152"	"17152"	"17131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.7"	""	"148.9"	""	"166.1"	""	"176.2"	""	"227.7"	"240.6"	""	"128"	"40"	"28.000"	"21.000"	"0.000618272562553481"	"17"	"0"	"0.0001607"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPVQVSPLIK"	"[M].vPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"545.69232"	"1635.06241"	"1635.06093"	"0.90"	"0.00049"	"12/92"	"12"	"92"	"2824006.41003418"	"HCD"	"MS2"	"17.85997"	"80.0"	"100.000"	"56.5647"	"17555"	"17555"	"17525"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.3"	""	"112.9"	""	"105.7"	""	"128.1"	"2.0"	"160.4"	"146.2"	""	"122"	"37"	"27.000"	"20.000"	"0.00109226957096153"	"17"	"0"	"0.0001732"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGSNLDLLDPGQ"	"[K].mFGSNLDLLDPGQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"818.41534"	"1635.82341"	"1635.82497"	"-0.95"	"-0.00078"	"8/124"	"8"	"124"	"409052.78515625"	"HCD"	"MS2"	"34.61211"	"22.4"	"100.000"	"84.1697"	"28797"	"28797"	"28769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.4"	""	"34.8"	""	"32.5"	""	"29.6"	""	"43.3"	"40.0"	""	"821"	"70"	"36.000"	"29.000"	"4.40872653766081E-06"	"22"	"0"	"0.0001149"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGSNLDLLDPGQ"	"[K].mFGSNLDLLDPGQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"818.41565"	"1635.82402"	"1635.82497"	"-0.58"	"-0.00048"	"8/124"	"8"	"124"	"393451.551818848"	"HCD"	"MS2"	"35.13443"	"23.6"	"100.000"	"84.1313"	"28730"	"28730"	"28708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.7"	""	"33.7"	""	"32.7"	""	"34.7"	""	"39.7"	"51.6"	""	"810"	"40"	"36.000"	"29.000"	"0.00384994941430794"	"25"	"7.476E-05"	"0.0001866"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWEQIDQMK"	"[K].vWEqIDQMk.[E]"	"N-Term(TMT6plex); Q4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"818.45477"	"1635.90227"	"1635.88165"	"12.60"	"0.01031"	"8/80"	"8"	"80"	"1249329.10394287"	"HCD"	"MS2"	"33.0407"	"97.4"	"100.000"	"55.6232"	"17170"	"17170"	"17141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.6"	""	"125.0"	""	"139.8"	""	"136.6"	""	"179.9"	"196.4"	""	"1040"	"14"	"37.000"	"30.000"	"1.99527767655985"	"15"	"0.00274"	"0.04288"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALLVYDITSR"	"[R].gAAGALLVYDITSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P51146"	"Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"P05714; P51146"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.46613"	"1635.92497"	"1635.92674"	"-1.08"	"-0.00088"	"11/110"	"11"	"110"	"1608896.38574219"	"HCD"	"MS2"	"22.3988"	"97.9"	"100.000"	"61.4289"	"19537"	"19537"	"19507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.8"	""	"116.1"	""	"129.5"	""	"170.8"	"0.2"	"201.5"	"195.0"	""	"967"	"74"	"36.000"	"29.000"	"1.7353875540086E-06"	"17"	"0"	"8.17E-07"	"1.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALLVYDITSR"	"[R].gAAGALLVYDITSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P51146"	"Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"P05714; P51146"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"545.98059"	"1635.92722"	"1635.92674"	"0.29"	"0.00016"	"13/110"	"13"	"110"	"3216665.84832764"	"HCD"	"MS2"	"39.97987"	"61.0"	"100.000"	"61.4179"	"19479"	"19479"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.0"	""	"75.0"	""	"68.2"	""	"109.8"	"0.8"	"119.9"	"127.0"	""	"945"	"22"	"36.000"	"29.000"	"0.299503438568898"	"21"	"0.0001889"	"0.0004699"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALLVYDITSR"	"[R].gAAGALLVYDITSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P51146"	"Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"P05714; P51146"	"Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"0"	"2"	"2"	"0.9733"	"0.0000"	"1"	"1"	"1"	"818.46747"	"1635.92766"	"1635.92674"	"0.56"	"0.00046"	"13/110"	"13"	"110"	"1487154.05236816"	"HCD"	"MS2"	"13.50293"	"93.9"	"100.000"	"61.3187"	"19438"	"19438"	"19417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.0"	""	"121.0"	""	"117.0"	""	"160.5"	"1.0"	"176.6"	"192.6"	""	"941"	"75"	"36.000"	"29.000"	"1.63515763959028E-06"	"20"	"0"	"6.428E-07"	"1.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"818.46954"	"1635.93181"	"1635.93917"	"-4.50"	"-0.00368"	"7/96"	"7"	"96"	"1057895.34234619"	"HCD"	"MS2"	"0"	"91.0"	"100.000"	"42.5766"	"11871"	"11871"	"11843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.7"	""	"86.5"	""	"96.5"	""	"161.3"	""	"219.8"	"231.3"	""	"946"	"34"	"36.000"	"29.000"	"0.0203639086762579"	"16"	"0.002711"	"0.04205"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"545.98352"	"1635.93601"	"1635.93917"	"-1.93"	"-0.00105"	"9/96"	"9"	"96"	"3502450.67980957"	"HCD"	"MS2"	"60.81585"	"164.7"	"100.000"	"45.5814"	"13093"	"13093"	"13067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.6"	""	"206.3"	""	"223.2"	""	"264.9"	"1.0"	"306.1"	"321.6"	""	"884"	"7"	"36.000"	"29.000"	"8.32572897554492"	"19"	"0.0003839"	"0.001907"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"545.98370"	"1635.93656"	"1635.93917"	"-1.59"	"-0.00087"	"13/96"	"13"	"96"	"27936872.8509521"	"HCD"	"MS2"	"22.91638"	"342.8"	"61.484"	"39.9232"	"10743"	"10743"	"10725"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.7"	""	"465.2"	""	"431.4"	""	"589.1"	"6.1"	"607.7"	"672.7"	""	"886"	"42"	"36.000"	"29.000"	"0.00261459078516127"	"21"	"0.0001889"	"0.0005105"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"818.47229"	"1635.93730"	"1635.93917"	"-1.14"	"-0.00093"	"10/96"	"10"	"96"	"5808137.22601318"	"HCD"	"MS2"	"0"	"298.4"	"100.000"	"39.9415"	"10751"	"10751"	"10725"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.9"	""	"355.9"	""	"367.7"	""	"587.0"	""	"553.1"	"595.1"	""	"882"	"52"	"36.000"	"29.000"	"0.000302997182046276"	"20"	"0"	"3.012E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"545.98419"	"1635.93802"	"1635.93917"	"-0.70"	"-0.00038"	"11/96"	"11"	"96"	"32419492.1784668"	"HCD"	"MS2"	"11.93232"	"349.1"	"52.901"	"40.0646"	"10846"	"10846"	"10829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"463.6"	""	"456.7"	""	"453.5"	""	"590.9"	"3.7"	"646.8"	"694.3"	""	"890"	"49"	"36.000"	"29.000"	"0.000587976557213026"	"23"	"0.0001889"	"0.0005223"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"818.47272"	"1635.93816"	"1635.93917"	"-0.62"	"-0.00050"	"9/96"	"9"	"96"	"633058.702453613"	"HCD"	"MS2"	"0"	"44.2"	"100.000"	"41.1552"	"11292"	"11292"	"11261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.1"	""	"59.8"	""	"54.2"	""	"54.1"	""	"91.8"	"89.2"	""	"890"	"37"	"36.000"	"29.000"	"0.00865685236322085"	"20"	"0.0003839"	"0.001657"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"818.47308"	"1635.93889"	"1635.93917"	"-0.17"	"-0.00014"	"10/96"	"10"	"96"	"947042.022460938"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"40.2675"	"10884"	"10884"	"10853"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.1"	""	"79.6"	""	"72.9"	""	"75.3"	""	"107.0"	"124.9"	""	"868"	"53"	"36.000"	"29.000"	"0.000243494821598092"	"22"	"0.0001308"	"0.0002503"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"818.47308"	"1635.93889"	"1635.93917"	"-0.17"	"-0.00014"	"8/96"	"8"	"96"	"5502894.76507568"	"HCD"	"MS2"	"0"	"273.5"	"100.000"	"40.0690"	"10847"	"10847"	"10829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"359.6"	""	"340.2"	""	"318.7"	""	"523.7"	"3.4"	"506.4"	"542.2"	""	"868"	"55"	"36.000"	"29.000"	"0.000133810357040822"	"21"	"0"	"4.339E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"545.98462"	"1635.93930"	"1635.93917"	"0.08"	"0.00005"	"9/96"	"9"	"96"	"9178548.76922607"	"HCD"	"MS2"	"39.6941"	"266.4"	"72.623"	"40.2953"	"10895"	"10895"	"10869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"375.5"	""	"374.2"	""	"348.7"	""	"360.4"	""	"538.7"	"531.2"	""	"856"	"22"	"36.000"	"29.000"	"0.256120162685817"	"20"	"0.0001889"	"0.0008947"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"545.98474"	"1635.93967"	"1635.93917"	"0.31"	"0.00017"	"11/96"	"11"	"96"	"9081409.44134521"	"HCD"	"MS2"	"35.91214"	"349.5"	"100.000"	"40.4000"	"10982"	"10982"	"10957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"452.9"	""	"468.5"	""	"476.5"	""	"489.8"	"7.1"	"718.7"	"703.8"	""	"875"	"25"	"36.000"	"29.000"	"0.147563197538255"	"20"	"0.0001889"	"0.0008915"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"818.47357"	"1635.93987"	"1635.93917"	"0.43"	"0.00035"	"10/96"	"10"	"96"	"915288.252502441"	"HCD"	"MS2"	"0"	"54.7"	"100.000"	"40.4138"	"10988"	"10988"	"10957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.7"	""	"79.7"	""	"72.0"	""	"75.0"	"1.1"	"101.8"	"120.0"	""	"875"	"58"	"36.000"	"29.000"	"6.85453593172315E-05"	"21"	"0.0001889"	"0.0007327"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KITQSNAIMR"	"[R].kITQSNAImR.[Y]"	"N-Term(TMT6plex); K1(TMT6plex); M9(Oxidation)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.99139"	"1635.95963"	"1635.96163"	"-1.22"	"-0.00067"	"7/94"	"7"	"94"	"1912121.25268555"	"HCD"	"MS2"	"9.213434"	"101.9"	"100.000"	"26.5387"	"5323"	"5323"	"5297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.5"	""	"138.0"	""	"145.2"	""	"184.1"	"1.6"	"166.3"	"143.4"	""	"729"	"10"	"35.000"	"28.000"	"3.30139533027394"	"13"	"0.001058"	"0.01321"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPHYFPLLK"	"[K].yPHYFPLLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.99323"	"1635.96512"	"1635.96631"	"-0.72"	"-0.00039"	"9/66"	"9"	"66"	"6728509.61303711"	"HCD"	"MS2"	"21.0602"	"181.0"	"100.000"	"51.7438"	"15551"	"15551"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"278.0"	""	"258.7"	""	"280.2"	""	"275.3"	""	"305.8"	"315.1"	""	"717"	"21"	"35.000"	"28.000"	"0.285423127124609"	"14"	"0.0001889"	"0.0008076"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPHYFPLLK"	"[K].yPHYFPLLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.99396"	"1635.96732"	"1635.96631"	"0.62"	"0.00034"	"10/66"	"10"	"66"	"5927371.76098633"	"HCD"	"MS2"	"18.0666"	"166.1"	"100.000"	"51.8959"	"15663"	"15663"	"15638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.6"	""	"255.5"	""	"266.0"	""	"245.5"	"1.3"	"280.8"	"299.8"	""	"717"	"19"	"35.000"	"28.000"	"0.49372959459848"	"14"	"0.0001889"	"0.0008481"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVYILDLAAK"	"[K].dGVYILDLAAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"545.99512"	"1635.97080"	"1635.97218"	"-0.84"	"-0.00046"	"11/92"	"11"	"92"	"2913121.65655518"	"HCD"	"MS2"	"36.02522"	"82.1"	"100.000"	"66.4822"	"21600"	"21600"	"21571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.2"	""	"104.8"	""	"108.7"	""	"136.0"	"1.1"	"142.8"	"153.5"	""	"667"	"43"	"35.000"	"28.000"	"0.00167531253605716"	"24"	"0"	"0.0001471"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVYILDLAAK"	"[K].dGVYILDLAAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"818.48920"	"1635.97112"	"1635.97218"	"-0.65"	"-0.00053"	"9/92"	"9"	"92"	"1287611.98309326"	"HCD"	"MS2"	"34.18956"	"105.7"	"100.000"	"66.4799"	"21599"	"21599"	"21571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.8"	""	"137.5"	""	"141.6"	""	"173.0"	""	"175.4"	"204.5"	""	"684"	"62"	"35.000"	"28.000"	"1.96800458569307E-05"	"22"	"0"	"1.105E-05"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVYILDLAAK"	"[K].dGVYILDLAAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"545.99524"	"1635.97116"	"1635.97218"	"-0.62"	"-0.00034"	"13/92"	"13"	"92"	"1687237.63995361"	"HCD"	"MS2"	"6.018557"	"53.5"	"100.000"	"66.8888"	"21713"	"21713"	"21689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.3"	""	"65.6"	""	"72.3"	""	"90.3"	"0.9"	"93.9"	"116.3"	""	"684"	"32"	"35.000"	"28.000"	"0.0222856910768808"	"18"	"0"	"0.0001698"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVYILDLAAK"	"[K].dGVYILDLAAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"545.99536"	"1635.97153"	"1635.97218"	"-0.40"	"-0.00022"	"11/92"	"11"	"92"	"1994361.86572266"	"HCD"	"MS2"	"5.481824"	"62.7"	"100.000"	"66.7775"	"21720"	"21720"	"21699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.3"	""	"88.3"	""	"77.7"	""	"96.9"	"2.3"	"113.1"	"122.0"	""	"684"	"41"	"35.000"	"28.000"	"0.00298556207988734"	"23"	"0.0001308"	"0.0002067"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVYILDLAAK"	"[K].dGVYILDLAAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7903"	"0.0000"	"1"	"1"	"1"	"818.48969"	"1635.97209"	"1635.97218"	"-0.05"	"-0.00004"	"9/92"	"9"	"92"	"903318.260559082"	"HCD"	"MS2"	"7.191574"	"78.0"	"100.000"	"66.7798"	"21721"	"21721"	"21699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.0"	""	"118.1"	""	"99.8"	""	"115.0"	""	"142.0"	"148.5"	""	"655"	"62"	"35.000"	"28.000"	"2.22439189682128E-05"	""	"0"	"5.504E-06"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVYILDLAAK"	"[K].dGVYILDLAAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"818.48981"	"1635.97234"	"1635.97218"	"0.10"	"0.00008"	"10/92"	"10"	"92"	"655653.348815918"	"HCD"	"MS2"	"0"	"59.3"	"100.000"	"66.8865"	"21712"	"21712"	"21689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.8"	""	"84.2"	""	"85.4"	""	"81.7"	"0.2"	"115.1"	"113.6"	""	"655"	"62"	"35.000"	"28.000"	"1.96884399025774E-05"	"21"	"0"	"7.602E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVYILDLAAK"	"[K].dGVYILDLAAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"545.99567"	"1635.97245"	"1635.97218"	"0.16"	"0.00009"	"9/92"	"9"	"92"	"2682656.65631104"	"HCD"	"MS2"	"3.077996"	"81.4"	"100.000"	"66.5822"	"21588"	"21588"	"21561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.0"	""	"108.3"	""	"118.7"	""	"132.9"	""	"137.2"	"159.8"	""	"655"	"32"	"35.000"	"28.000"	"0.0195079352005751"	"19"	"0"	"0.0001729"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVYILDLAAK"	"[K].dGVYILDLAAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"818.49005"	"1635.97283"	"1635.97218"	"0.40"	"0.00032"	"9/92"	"9"	"92"	"1501609.23828125"	"HCD"	"MS2"	"12.90545"	"118.7"	"100.000"	"66.5845"	"21589"	"21589"	"21561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"188.2"	""	"148.8"	""	"167.8"	""	"200.8"	"0.1"	"183.6"	"234.0"	""	"654"	"62"	"35.000"	"28.000"	"1.86014908385936E-05"	"22"	"0"	"1.424E-05"	"1.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFITGGGTGLGK"	"[K].vAFITGGGTGLGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.49512"	"1635.98296"	"1635.98341"	"-0.28"	"-0.00023"	"11/104"	"11"	"104"	"1712997.37371826"	"HCD"	"MS2"	"27.74048"	"151.0"	"100.000"	"52.8349"	"16047"	"16047"	"16022"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.3"	""	"258.6"	""	"219.1"	""	"194.5"	""	"258.1"	"276.4"	""	"614"	"50"	"34.000"	"27.000"	"0.000289826689019778"	"16"	"0"	"1.449E-06"	"1.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAFITGGGTGLGK"	"[K].vAFITGGGTGLGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.49530"	"1635.98332"	"1635.98341"	"-0.05"	"-0.00004"	"11/104"	"11"	"104"	"2273602.5413208"	"HCD"	"MS2"	"32.07055"	"185.8"	"100.000"	"52.5906"	"15897"	"15897"	"15874"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"287.5"	""	"306.5"	""	"261.6"	""	"274.6"	""	"299.2"	"332.8"	""	"578"	"43"	"34.000"	"27.000"	"0.00137055933740211"	"15"	"0"	"4.612E-06"	"1.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIVNYKPK"	"[K].sIVNYkPk.[I]"	"N-Term(TMT6plex); K6(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.01764"	"1636.03836"	"1636.04009"	"-1.05"	"-0.00057"	"11/64"	"11"	"64"	"30481157.973999"	"HCD"	"MS2"	"30.96587"	"1107.5"	"64.179"	"34.4489"	"8500"	"8500"	"8483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1660.7"	""	"1457.8"	""	"1324.6"	""	"1546.2"	""	"2191.5"	"2334.4"	""	"252"	"14"	"31.000"	"24.000"	"0.49587309507428"	"13"	"0.0001889"	"0.001025"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIVNYKPK"	"[K].sIVNYkPk.[I]"	"N-Term(TMT6plex); K6(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.01770"	"1636.03855"	"1636.04009"	"-0.94"	"-0.00051"	"11/64"	"11"	"64"	"29130338.5099487"	"HCD"	"MS2"	"41.89289"	"1067.2"	"66.216"	"34.4897"	"8559"	"8559"	"8538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1682.7"	""	"1418.0"	""	"1275.5"	""	"1474.4"	""	"2109.8"	"2168.1"	""	"250"	"14"	"30.000"	"23.000"	"0.518692553292953"	"13"	"0.0001889"	"0.0005974"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].LHFFmPGFAPLTSR.[G]"	"M5(Oxidation)"	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.28192"	"1636.83121"	"1636.83044"	"0.47"	"0.00026"	"13/106"	"13"	"106"	"2345263.22436523"	"HCD"	"MS2"	"75.38013"	"79.7"	"100.000"	"50.8878"	"15251"	"15251"	"15222"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.8"	""	"113.8"	""	"107.7"	""	"116.2"	"0.9"	"154.5"	"148.5"	"NoQuanLabels"	"899"	"20"	"36.000"	"29.000"	"0.436244230276848"	"14"	"0.0001889"	"0.0005495"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNYNHLMPTR"	"[K].vYNYNHLMPTR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.28619"	"1636.84403"	"1636.84671"	"-1.64"	"-0.00089"	"11/96"	"11"	"96"	"11879103.277832"	"HCD"	"MS2"	"36.36715"	"190.3"	"44.994"	"36.3999"	"9300"	"9300"	"9274"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"305.3"	""	"276.0"	""	"275.0"	""	"299.0"	""	"321.1"	"326.1"	""	"988"	"32"	"36.000"	"29.000"	"0.034097846309708"	"14"	"0"	"8.667E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNYNHLMPTR"	"[K].vYNYNHLMPTR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.28656"	"1636.84513"	"1636.84671"	"-0.97"	"-0.00053"	"11/96"	"11"	"96"	"11346481.703064"	"HCD"	"MS2"	"40.98946"	"335.0"	"82.612"	"36.4823"	"9377"	"9377"	"9353"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"534.3"	""	"503.3"	""	"480.5"	""	"554.0"	"0.8"	"558.1"	"536.4"	""	"1004"	"31"	"37.000"	"30.000"	"0.0393281680668638"	"14"	"0"	"0.000173"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIFFLPWEK"	"[R].vIFFLPWEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"818.99622"	"1636.98516"	"1636.98671"	"-0.95"	"-0.00078"	"4/64"	"4"	"64"	"68534.3130493164"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"90.0779"	"31100"	"31100"	"31090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"4.9"	""	"5.0"	""	"6.5"	""	"7.1"	"8.0"	""	"514"	"3"	"34.000"	"27.000"	"12.7918430839586"	"15"	"0.002456"	"0.03717"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIFFLPWEK"	"[R].vIFFLPWEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"818.99677"	"1636.98625"	"1636.98671"	"-0.28"	"-0.00023"	"3/64"	"3"	"64"	"121612.722351074"	"HCD"	"MS2"	"22.30791"	"8.5"	"100.000"	"89.7023"	"30922"	"30922"	"30904"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"11.2"	""	"8.4"	""	"19.0"	""	"16.7"	"15.0"	""	"497"	"6"	"33.000"	"26.000"	"5.83883755980805"	"16"	"0.001966"	"0.029"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIFFLPWEK"	"[R].vIFFLPWEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"818.99677"	"1636.98625"	"1636.98671"	"-0.28"	"-0.00023"	"7/64"	"7"	"64"	"147311.487792969"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"89.8024"	"30997"	"30997"	"30987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.4"	""	"8.2"	""	"9.1"	""	"11.2"	""	"10.9"	"12.6"	""	"497"	"21"	"33.000"	"26.000"	"0.195580878739232"	"24"	"0.0006037"	"0.00425"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIFFLPWEK"	"[R].vIFFLPWEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.33447"	"1636.98886"	"1636.98671"	"1.32"	"0.00072"	"8/64"	"8"	"64"	"135858.536193848"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"89.8791"	"30991"	"30991"	"30973"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"2.1"	""	"4.1"	""	"9.5"	""	"8.2"	"7.6"	""	"497"	"17"	"33.000"	"26.000"	"0.457431842365035"	"14"	"0.000494"	"0.00274"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGIYTVLQTK"	"[K].vGGIYTVLQTk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A2RRU1"	"Glycogen [starch] synthase, muscle OS=Rattus norvegicus OX=10116 GN=Gys1 PE=1 SV=1"	"A2RRU1"	"Glycogen [starch] synthase, muscle OS=Rattus norvegicus OX=10116 GN=Gys1 PE=1 SV=1"	"0"	"2"	"2"	"0.9825"	"0.0000"	"1"	"1"	"1"	"819.00598"	"1637.00469"	"1637.00381"	"0.53"	"0.00044"	"15/92"	"15"	"92"	"977402.229492188"	"HCD"	"MS2"	"20.11542"	"88.7"	"100.000"	"56.7906"	"17593"	"17593"	"17563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.3"	""	"129.6"	""	"128.4"	""	"118.1"	""	"151.6"	"189.3"	""	"384"	"57"	"32.000"	"25.000"	"3.83090364474025E-05"	"17"	"0"	"0.0001551"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLLNMPGPPK"	"[R].lVLLNMPGPPk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"546.34546"	"1637.02182"	"1637.02244"	"-0.38"	"-0.00021"	"11/94"	"11"	"94"	"1270272.80474854"	"HCD"	"MS2"	"32.60306"	"38.5"	"100.000"	"65.4258"	"21169"	"21169"	"21139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.1"	""	"44.3"	""	"52.4"	"1.9"	"60.9"	"1.1"	"82.4"	"83.2"	""	"299"	"47"	"31.000"	"24.000"	"0.000296238290357862"	"16"	"0"	"0.0001186"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLLNMPGPPK"	"[R].lVLLNMPGPPk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"546.34558"	"1637.02219"	"1637.02244"	"-0.15"	"-0.00008"	"10/94"	"10"	"94"	"981481.553649902"	"HCD"	"MS2"	"8.364005"	"35.1"	"100.000"	"65.5330"	"21160"	"21160"	"21129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.1"	""	"41.4"	""	"48.5"	""	"59.0"	""	"69.7"	"71.2"	""	"297"	"44"	"31.000"	"24.000"	"0.000556834908334543"	"16"	"0"	"0.000161"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWFEGQGLAGK"	"[R].sWFEGQGLAGk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"1"	"819.45581"	"1637.90434"	"1637.90516"	"-0.50"	"-0.00041"	"8/96"	"8"	"96"	"963693.856140137"	"HCD"	"MS2"	"79.16299"	"69.3"	"100.000"	"52.0245"	"15716"	"15716"	"15686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.4"	""	"92.3"	""	"100.6"	""	"100.8"	""	"132.2"	"141.7"	""	"1011"	"0"	"37.000"	"30.000"	"46.5287258521229"	"13"	"0.001587"	"0.02173"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRPVTMYMPK"	"[R].gRPVTMYMPk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"546.64673"	"1637.92563"	"1637.92716"	"-0.93"	"-0.00051"	"8/88"	"8"	"88"	"11526188.9343872"	"HCD"	"MS2"	"14.44455"	"515.4"	"85.324"	"35.2307"	"8820"	"8820"	"8795"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"773.8"	""	"719.8"	""	"708.4"	""	"633.8"	""	"997.1"	"1054.6"	""	"970"	"8"	"36.000"	"29.000"	"7.04274134530054"	"15"	"0.0001859"	"0.000316"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRPVTMYMPK"	"[R].gRPVTMYMPk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.64685"	"1637.92600"	"1637.92716"	"-0.71"	"-0.00039"	"8/88"	"8"	"88"	"11214616.2091064"	"HCD"	"MS2"	"20.95448"	"477.8"	"100.000"	"35.2399"	"8867"	"8867"	"8842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"720.8"	""	"686.3"	""	"672.4"	""	"565.4"	""	"914.9"	"972.0"	""	"955"	"11"	"36.000"	"29.000"	"3.63055797238937"	"13"	"0.0002277"	"0.001197"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQIFDLMDAK"	"[K].vQIFDLMDAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZBE5"	"Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus OX=10116 GN=Nek7 PE=2 SV=1"	"D3ZBE5"	"Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus OX=10116 GN=Nek7 PE=2 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"546.64893"	"1637.93222"	"1637.93369"	"-0.89"	"-0.00049"	"10/94"	"10"	"94"	"860596.009399414"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"72.3296"	"23978"	"23978"	"23951"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.0"	""	"47.5"	""	"52.9"	""	"38.4"	"2.2"	"63.1"	"51.1"	""	"911"	"38"	"36.000"	"29.000"	"0.00775333200573901"	"23"	"0.0001859"	"0.0003538"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQIFDLMDAK"	"[K].vQIFDLMDAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZBE5"	"Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus OX=10116 GN=Nek7 PE=2 SV=1"	"D3ZBE5"	"Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus OX=10116 GN=Nek7 PE=2 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"819.47028"	"1637.93328"	"1637.93369"	"-0.25"	"-0.00021"	"9/94"	"9"	"94"	"563342.819274902"	"HCD"	"MS2"	"0"	"49.7"	"100.000"	"72.3081"	"23918"	"23918"	"23889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.9"	""	"74.6"	""	"79.5"	""	"59.0"	"0.3"	"80.7"	"86.8"	""	"896"	"43"	"36.000"	"29.000"	"0.00201037934690043"	"21"	"0"	"2.056E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDMLDGFIK"	"[K].lQDMLDGFIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"819.47046"	"1637.93364"	"1637.93369"	"-0.03"	"-0.00002"	"9/94"	"9"	"94"	"955110.909118652"	"HCD"	"MS2"	"23.11894"	"71.4"	"100.000"	"79.2398"	"26786"	"26786"	"26767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.1"	""	"111.3"	""	"107.7"	""	"71.8"	""	"141.6"	"138.4"	""	"888"	"56"	"36.000"	"29.000"	"0.000111784855592493"	"24"	"0"	"1.4E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQIFDLMDAK"	"[K].vQIFDLMDAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZBE5"	"Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus OX=10116 GN=Nek7 PE=2 SV=1"	"D3ZBE5"	"Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus OX=10116 GN=Nek7 PE=2 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"546.64941"	"1637.93369"	"1637.93369"	"0.00"	"0.00000"	"10/94"	"10"	"94"	"771579.375610352"	"HCD"	"MS2"	"14.26664"	"32.0"	"100.000"	"72.3887"	"23951"	"23951"	"23921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.6"	""	"44.7"	""	"48.0"	""	"43.0"	""	"50.0"	"65.8"	""	"886"	"32"	"36.000"	"29.000"	"0.0250844005043946"	"16"	"0.0002277"	"0.001176"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDMLDGFIK"	"[K].lQDMLDGFIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.7966"	"0.0000"	"1"	"1"	"1"	"819.47052"	"1637.93376"	"1637.93369"	"0.05"	"0.00004"	"9/94"	"9"	"94"	"958797.143737793"	"HCD"	"MS2"	"32.55706"	"71.4"	"100.000"	"79.2548"	"26741"	"26741"	"26721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.7"	""	"106.4"	""	"109.0"	""	"79.4"	""	"129.9"	"146.2"	""	"874"	"59"	"36.000"	"29.000"	"5.81408580656426E-05"	"28"	"0"	"8.481E-06"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQIFDLMDAK"	"[K].vQIFDLMDAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZBE5"	"Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus OX=10116 GN=Nek7 PE=2 SV=1"	"D3ZBE5"	"Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus OX=10116 GN=Nek7 PE=2 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"819.47095"	"1637.93462"	"1637.93369"	"0.57"	"0.00047"	"9/94"	"9"	"94"	"530186.223083496"	"HCD"	"MS2"	"0"	"46.8"	"100.000"	"72.2582"	"23949"	"23949"	"23919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.4"	""	"68.4"	""	"80.2"	""	"44.7"	"0.5"	"79.5"	"82.0"	""	"879"	"63"	"36.000"	"29.000"	"2.0509679764813E-05"	"28"	"0"	"3.737E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSFNANLALK"	"[R].tTSFNANLALk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.6974"	"0.0000"	"1"	"1"	"1"	"819.48419"	"1637.96111"	"1637.96268"	"-0.96"	"-0.00079"	"10/96"	"10"	"96"	"2314972.89532471"	"HCD"	"MS2"	"0"	"209.9"	"100.000"	"46.3714"	"13363"	"13363"	"13336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"346.4"	""	"344.5"	""	"255.8"	""	"375.7"	""	"343.6"	"318.1"	""	"673"	"76"	"35.000"	"28.000"	"8.91220296641155E-07"	""	"0"	"5.515E-06"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSFNANLALK"	"[R].tTSFNANLALk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"819.48517"	"1637.96306"	"1637.96268"	"0.23"	"0.00019"	"9/96"	"9"	"96"	"2318590.49273682"	"HCD"	"MS2"	"0"	"207.0"	"100.000"	"46.6543"	"13526"	"13526"	"13506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"321.6"	""	"355.4"	""	"262.7"	""	"359.8"	""	"354.0"	"304.5"	""	"649"	"51"	"35.000"	"28.000"	"0.000240555173302148"	""	"0"	"1.077E-05"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPILFLTQGK"	"[K].yPILFLTQGk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80VJ4"	"Glycerophosphocholine phosphodiesterase GPCPD1 OS=Rattus norvegicus OX=10116 GN=Gpcpd1 PE=1 SV=1"	"Q80VJ4"	"Glycerophosphocholine phosphodiesterase GPCPD1 OS=Rattus norvegicus OX=10116 GN=Gpcpd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.66626"	"1637.98423"	"1638.00309"	"-11.51"	"-0.00629"	"8/76"	"8"	"76"	"1016528.85839844"	"HCD"	"MS2"	"23.12341"	"47.2"	"100.000"	"71.3448"	"23576"	"23576"	"23546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.0"	""	"77.2"	""	"66.2"	""	"80.0"	""	"83.9"	"82.9"	""	"474"	"2"	"33.000"	"26.000"	"16.3586833510137"	"13"	"0.00119"	"0.01621"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLQEMSSK"	"[R].kLQEMSSk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.66632"	"1637.98441"	"1637.98634"	"-1.18"	"-0.00064"	"5/76"	"5"	"76"	"16097463.1386719"	"HCD"	"MS2"	"7.598875"	"611.8"	"63.830"	"30.6422"	"6954"	"6954"	"6936"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1169.2"	""	"759.0"	""	"919.9"	""	"773.8"	""	"919.4"	"1249.4"	""	"474"	"20"	"33.000"	"26.000"	"0.261064816361315"	"14"	"0.0003839"	"0.001601"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLQEMSSK"	"[R].kLQEMSSk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.66650"	"1637.98496"	"1637.98634"	"-0.84"	"-0.00046"	"5/76"	"5"	"76"	"17532878.9589844"	"HCD"	"MS2"	"11.0457"	"1026.6"	"100.000"	"30.6813"	"7011"	"7011"	"6992"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1993.3"	""	"1277.3"	""	"1547.1"	""	"1283.1"	"1.7"	"1560.8"	"2040.7"	""	"479"	"20"	"33.000"	"26.000"	"0.265036396262651"	"14"	"0.0002277"	"0.001188"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INLWHLEITDR"	"[R].iNLWHLEITDR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P36876"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1"	"P36876; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.97668"	"1638.91550"	"1638.91651"	"-0.61"	"-0.00034"	"7/104"	"7"	"104"	"3829563.68908691"	"HCD"	"MS2"	"11.59201"	"81.7"	"100.000"	"57.2516"	"17835"	"17835"	"17813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.8"	""	"117.6"	""	"127.9"	""	"126.1"	""	"146.4"	"141.9"	""	"952"	"30"	"36.000"	"29.000"	"0.048821031689567"	"14"	"0"	"6.312E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INLWHLEITDR"	"[R].iNLWHLEITDR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P36876"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1"	"P36876; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"546.97742"	"1638.91770"	"1638.91651"	"0.73"	"0.00040"	"7/104"	"7"	"104"	"3492564.86541748"	"HCD"	"MS2"	"11.24663"	"83.6"	"100.000"	"57.0824"	"17712"	"17712"	"17691"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.7"	""	"110.4"	""	"113.6"	""	"139.4"	""	"145.3"	"160.8"	""	"946"	"31"	"36.000"	"29.000"	"0.0368011288641827"	"19"	"0"	"6.331E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLGDSAAGMAIK"	"[R].fLGDSAAGMAIk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.8313"	"0.0000"	"1"	"1"	"1"	"819.96680"	"1638.92632"	"1638.92893"	"-1.60"	"-0.00131"	"19/90"	"19"	"90"	"2337408.52593994"	"HCD"	"MS2"	"38.17503"	"204.3"	"100.000"	"55.2510"	"17017"	"17017"	"16997"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.4"	""	"282.2"	""	"335.3"	""	"236.7"	""	"379.3"	"375.0"	""	"890"	"83"	"36.000"	"29.000"	"2.23028318964136E-07"	""	"0"	"1.845E-06"	"1.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLGDSAAGMAIK"	"[R].fLGDSAAGMAIk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"819.96759"	"1638.92790"	"1638.92893"	"-0.63"	"-0.00052"	"19/90"	"19"	"90"	"2182278.40411377"	"HCD"	"MS2"	"20.03951"	"198.3"	"100.000"	"55.0910"	"16898"	"16898"	"16875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"325.9"	""	"297.3"	""	"304.9"	""	"224.3"	""	"350.6"	"375.1"	""	"876"	"80"	"36.000"	"29.000"	"4.03156912427889E-07"	""	"0"	"2.714E-06"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLGDSAAGMAIK"	"[R].fLGDSAAGMAIk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"546.98096"	"1638.92832"	"1638.92893"	"-0.38"	"-0.00021"	"9/90"	"9"	"90"	"4608417.98779297"	"HCD"	"MS2"	"19.29523"	"147.2"	"100.000"	"55.0979"	"16901"	"16901"	"16875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.9"	""	"215.9"	""	"226.8"	""	"179.4"	""	"275.7"	"280.1"	""	"877"	"46"	"36.000"	"29.000"	"0.00111421653138337"	"25"	"0"	"2.101E-05"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLGDSAAGMAIK"	"[R].fLGDSAAGMAIk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"546.98120"	"1638.92905"	"1638.92893"	"0.07"	"0.00004"	"8/90"	"8"	"90"	"5908956.38482666"	"HCD"	"MS2"	"31.64007"	"170.3"	"100.000"	"55.2577"	"17020"	"17020"	"16997"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"271.7"	""	"258.5"	""	"266.2"	""	"213.0"	""	"302.4"	"301.4"	""	"852"	"52"	"36.000"	"29.000"	"0.000288675282242148"	"28"	"0"	"2.349E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEAFLITMEK"	"[R].vEAFLITMEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"819.97986"	"1638.95244"	"1638.95409"	"-1.00"	"-0.00082"	"14/86"	"14"	"86"	"329726.065429688"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"72.6386"	"24104"	"24104"	"24079"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.6"	""	"51.3"	""	"49.2"	""	"40.1"	"0.4"	"50.1"	"62.4"	""	"719"	"52"	"35.000"	"28.000"	"0.000206870657472708"	"19"	"0"	"4.609E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEAFLITMEK"	"[R].vEAFLITMEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"819.98004"	"1638.95281"	"1638.95409"	"-0.78"	"-0.00064"	"6/86"	"6"	"86"	"216407.176574707"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"72.7371"	"24093"	"24093"	"24065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.0"	""	"35.4"	""	"38.2"	""	"32.6"	""	"40.7"	"44.8"	""	"706"	"22"	"35.000"	"28.000"	"0.198964092506562"	"15"	"0.0003839"	"0.00163"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEAFLITMEK"	"[R].vEAFLITMEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"546.98932"	"1638.95340"	"1638.95409"	"-0.42"	"-0.00023"	"11/86"	"11"	"86"	"1292287.91931152"	"HCD"	"MS2"	"18.27238"	"39.3"	"100.000"	"72.6432"	"24106"	"24106"	"24079"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.5"	""	"59.2"	""	"55.5"	""	"51.7"	""	"77.4"	"71.3"	""	"705"	"31"	"35.000"	"28.000"	"0.0259513001866894"	"25"	"0.0001859"	"0.0003291"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEAFLITMEK"	"[R].vEAFLITMEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"546.98962"	"1638.95432"	"1638.95409"	"0.14"	"0.00008"	"11/86"	"11"	"86"	"1202273.59246826"	"HCD"	"MS2"	"33.60238"	"38.4"	"100.000"	"72.6911"	"24074"	"24074"	"24049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.3"	""	"54.9"	""	"62.1"	""	"56.4"	""	"65.3"	"71.9"	""	"677"	"25"	"35.000"	"28.000"	"0.11157288757207"	"20"	"0.0001859"	"0.0003697"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIGTGSFFPK"	"[K].qVIGTGSFFPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.8769"	"0.0000"	"1"	"1"	"1"	"546.99176"	"1638.96073"	"1638.96195"	"-0.75"	"-0.00041"	"9/104"	"9"	"104"	"46184221.2104492"	"HCD"	"MS2"	"2.542807"	"182.0"	"21.696"	"54.8514"	"16854"	"16854"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"200.1"	""	"224.5"	""	"226.5"	""	"301.7"	"2.2"	"357.2"	"416.8"	""	"638"	"65"	"35.000"	"28.000"	"9.17890094300679E-06"	"25"	"0"	"2.423E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIGTGSFFPK"	"[K].qVIGTGSFFPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.9180"	"0.0000"	"1"	"1"	"1"	"819.98419"	"1638.96111"	"1638.96195"	"-0.51"	"-0.00042"	"9/104"	"9"	"104"	"482745.312988281"	"HCD"	"MS2"	"0"	"44.8"	"100.000"	"54.2427"	"16552"	"16552"	"16525"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.9"	""	"58.6"	""	"57.4"	""	"76.4"	"1.7"	"86.2"	"95.9"	""	"638"	"61"	"35.000"	"28.000"	"2.56915722742503E-05"	"21"	"0"	"5.991E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIGTGSFFPK"	"[K].qVIGTGSFFPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"819.98431"	"1638.96135"	"1638.96195"	"-0.36"	"-0.00030"	"18/104"	"18"	"104"	"581907.182189941"	"HCD"	"MS2"	"0"	"53.2"	"100.000"	"54.4604"	"16694"	"16694"	"16667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.8"	""	"69.9"	""	"69.4"	""	"88.4"	"1.5"	"98.2"	"110.7"	""	"634"	"52"	"35.000"	"28.000"	"0.000213333600042129"	"17"	"0"	"1.183E-05"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIGTGSFFPK"	"[K].qVIGTGSFFPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.8507"	"0.0000"	"1"	"1"	"1"	"546.99200"	"1638.96146"	"1638.96195"	"-0.30"	"-0.00016"	"9/104"	"9"	"104"	"7645482.68658447"	"HCD"	"MS2"	"12.15841"	"170.3"	"100.000"	"54.5454"	"16728"	"16728"	"16709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.0"	""	"244.8"	""	"208.7"	""	"306.4"	"2.6"	"321.6"	"327.4"	""	"633"	"67"	"35.000"	"28.000"	"5.68033192892496E-06"	"27"	"0"	"1.536E-05"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIGTGSFFPK"	"[K].qVIGTGSFFPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"819.98438"	"1638.96147"	"1638.96195"	"-0.29"	"-0.00024"	"10/104"	"10"	"104"	"17155367.2346191"	"HCD"	"MS2"	"0"	"409.9"	"59.369"	"54.5392"	"16673"	"16673"	"16656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"474.1"	""	"522.0"	""	"517.9"	""	"685.1"	"2.3"	"797.3"	"895.0"	""	"633"	"60"	"35.000"	"28.000"	"3.12157457202278E-05"	"22"	"0"	"4.148E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIGTGSFFPK"	"[K].qVIGTGSFFPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"546.99225"	"1638.96219"	"1638.96195"	"0.15"	"0.00008"	"9/104"	"9"	"104"	"13852715.5160522"	"HCD"	"MS2"	"7.004928"	"264.4"	"100.000"	"54.3988"	"16615"	"16615"	"16593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"292.9"	""	"365.2"	""	"323.9"	""	"458.9"	""	"514.0"	"555.9"	""	"618"	"70"	"34.000"	"27.000"	"3.19123274380272E-06"	"27"	"0"	"6.697E-06"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIGTGSFFPK"	"[K].qVIGTGSFFPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"546.99243"	"1638.96274"	"1638.96195"	"0.48"	"0.00026"	"9/104"	"9"	"104"	"24214435.0396729"	"HCD"	"MS2"	"3.271978"	"184.5"	"39.920"	"54.7002"	"16738"	"16738"	"16720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.1"	""	"226.4"	""	"218.9"	""	"316.7"	"0.1"	"365.9"	"430.2"	""	"618"	"70"	"34.000"	"27.000"	"3.13298618192634E-06"	"27"	"0"	"1.637E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIGTGSFFPK"	"[K].qVIGTGSFFPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.9365"	"0.0000"	"1"	"1"	"1"	"819.98553"	"1638.96379"	"1638.96195"	"1.12"	"0.00092"	"10/104"	"10"	"104"	"17460092.9530029"	"HCD"	"MS2"	"0.5937954"	"606.3"	"55.924"	"54.7732"	"16822"	"16822"	"16805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"711.6"	""	"714.2"	""	"742.0"	""	"1043.2"	""	"1180.0"	"1367.1"	""	"617"	"63"	"34.000"	"27.000"	"1.54972688867656E-05"	"21"	"0"	"5.161E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENVVLVVPAKTK"	"[R].iENVVLVVPAKTK.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"1"	"3"	"3"	"0.0909"	"0.0000"	"1"	"1"	"1"	"547.02283"	"1639.05393"	"1639.03556"	"11.21"	"0.00612"	"8/136"	"8"	"136"	"3207744.19927979"	"HCD"	"MS2"	"19.4348"	"83.8"	"100.000"	"61.5721"	"19595"	"19595"	"19571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.1"	""	"120.5"	""	"145.1"	""	"124.1"	""	"148.0"	"145.1"	""	"132"	"44"	"28.000"	"21.000"	"0.00027386966813868"	""	"0.0007793"	"0.007367"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENVVLVVPAKTK"	"[R].iENVVLVVPAKTK.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"1"	"3"	"3"	"0.1860"	"0.0000"	"1"	"1"	"1"	"547.02313"	"1639.05484"	"1639.03556"	"11.77"	"0.00643"	"15/136"	"15"	"136"	"3325639.51013184"	"HCD"	"MS2"	"25.80987"	"92.7"	"100.000"	"61.3695"	"19459"	"19459"	"19433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.3"	""	"151.6"	""	"140.3"	""	"140.7"	"2.0"	"152.6"	"160.5"	""	"133"	"43"	"28.000"	"21.000"	"0.00036209426414021"	""	"0.002331"	"0.03424"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDYLTQVEK"	"[R].wDYLTQVEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"820.45837"	"1639.90947"	"1639.90958"	"-0.07"	"-0.00005"	"8/82"	"8"	"82"	"746141.925476074"	"HCD"	"MS2"	"18.99141"	"69.6"	"100.000"	"58.7690"	"18452"	"18452"	"18421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.9"	""	"76.4"	""	"83.2"	""	"122.9"	"2.6"	"125.5"	"152.4"	""	"895"	"46"	"36.000"	"29.000"	"0.00105388455454346"	"27"	"0"	"5.515E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDYLTQVEK"	"[R].wDYLTQVEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"820.45856"	"1639.90984"	"1639.90958"	"0.16"	"0.00013"	"16/82"	"16"	"82"	"642676.12689209"	"HCD"	"MS2"	"19.97874"	"65.2"	"100.000"	"58.6472"	"18352"	"18352"	"18329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.2"	""	"70.8"	""	"79.5"	""	"115.2"	"1.0"	"124.1"	"140.3"	""	"896"	"51"	"36.000"	"29.000"	"0.00035915177239768"	"29"	"0"	"4.387E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIIIGDMGVGK"	"[K].yIIIGDmGVGk.[S]"	"N-Term(TMT6plex); M7(Oxidation); K11(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"820.47882"	"1639.95036"	"1639.94934"	"0.63"	"0.00051"	"9/80"	"9"	"80"	"1192638.33105469"	"HCD"	"MS2"	"0"	"86.0"	"100.000"	"51.8311"	"15637"	"15637"	"15606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.0"	""	"115.2"	""	"123.9"	""	"191.9"	""	"141.6"	"153.0"	""	"685"	"49"	"35.000"	"28.000"	"0.000400553541424306"	"18"	"0.0001889"	"0.0004235"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIIIGDMGVGK"	"[K].yIIIGDmGVGk.[S]"	"N-Term(TMT6plex); M7(Oxidation); K11(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"820.47882"	"1639.95036"	"1639.94934"	"0.63"	"0.00051"	"8/80"	"8"	"80"	"1212931.47259521"	"HCD"	"MS2"	"9.002954"	"93.7"	"100.000"	"51.6679"	"15520"	"15520"	"15490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.2"	""	"120.8"	""	"121.6"	""	"204.3"	""	"171.7"	"170.4"	""	"685"	"49"	"35.000"	"28.000"	"0.000430190262565494"	"16"	"0.0001889"	"0.0004741"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVPESLLAWQR"	"[K].lVVPESLLAWQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"0"	"3"	"3"	"0.8689"	"0.0000"	"1"	"1"	"1"	"547.32867"	"1639.97147"	"1639.97329"	"-1.11"	"-0.00061"	"13/92"	"13"	"92"	"1477120.90472412"	"HCD"	"MS2"	"4.207674"	"18.6"	"100.000"	"75.0229"	"25077"	"25077"	"25055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.0"	""	"21.3"	""	"25.8"	""	"26.2"	"2.3"	"36.6"	"41.4"	""	"586"	"61"	"34.000"	"27.000"	"2.14223751460642E-05"	"24"	"0.0001308"	"0.0002068"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVPESLLAWQR"	"[K].lVVPESLLAWQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"547.32910"	"1639.97275"	"1639.97329"	"-0.33"	"-0.00018"	"13/92"	"13"	"92"	"1353400.90557861"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"75.0024"	"25017"	"25017"	"24993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.8"	""	"22.3"	""	"23.5"	""	"31.3"	"1.1"	"34.5"	"39.9"	""	"587"	"56"	"34.000"	"27.000"	"6.80155329765749E-05"	"24"	"0"	"6.331E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEKET"	"[K].vLLVPGPEkET.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"1"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"547.33868"	"1640.00150"	"1640.00348"	"-1.21"	"-0.00066"	"6/86"	"6"	"86"	"12068730.7365112"	"HCD"	"MS2"	"18.99564"	"259.6"	"100.000"	"49.5877"	"14722"	"14722"	"14702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"434.9"	""	"428.0"	""	"433.2"	""	"341.7"	""	"392.5"	"423.0"	""	"364"	"18"	"32.000"	"25.000"	"0.304839603436811"	"16"	"0.003818"	"0.09506"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEKET"	"[K].vLLVPGPEkET.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"547.33917"	"1640.00296"	"1640.00348"	"-0.31"	"-0.00017"	"6/86"	"6"	"86"	"11483359.105957"	"HCD"	"MS2"	"22.207"	"256.1"	"100.000"	"49.3168"	"14568"	"14568"	"14543"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"416.9"	""	"409.0"	""	"427.7"	""	"339.7"	""	"399.9"	"428.1"	""	"370"	"16"	"32.000"	"25.000"	"0.432684889151981"	"15"	"0.003507"	"0.07897"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEKET"	"[K].vLLVPGPEkET.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"1"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"820.50519"	"1640.00310"	"1640.00348"	"-0.23"	"-0.00019"	"5/86"	"5"	"86"	"5915118.00292969"	"HCD"	"MS2"	"0"	"280.1"	"100.000"	"49.5823"	"14720"	"14720"	"14702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"585.3"	""	"536.2"	""	"545.8"	""	"312.7"	"6.6"	"292.1"	"355.5"	""	"369"	"32"	"32.000"	"25.000"	"0.0120780374115412"	""	"0.002981"	"0.0568"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLVPGPEKET"	"[K].vLLVPGPEkET.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"1"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"820.50519"	"1640.00310"	"1640.00348"	"-0.23"	"-0.00019"	"7/86"	"7"	"86"	"6067900.72338867"	"HCD"	"MS2"	"34.73835"	"298.2"	"100.000"	"49.2845"	"14555"	"14555"	"14527"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"584.7"	""	"555.8"	""	"533.6"	""	"331.7"	""	"371.4"	"433.4"	""	"369"	"20"	"32.000"	"25.000"	"0.19498283044992"	"20"	"0.006061"	"0.212"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVHPISTMIK"	"[R].rVHPISTMIk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"547.34033"	"1640.00644"	"1640.00819"	"-1.06"	"-0.00058"	"7/92"	"7"	"92"	"14464232.8418579"	"HCD"	"MS2"	"17.56264"	"436.3"	"100.000"	"30.1244"	"6783"	"6783"	"6761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"819.4"	""	"700.8"	""	"699.2"	""	"453.9"	"1.4"	"666.4"	"780.5"	""	"349"	"40"	"32.000"	"25.000"	"0.00159880475526289"	"15"	"0.0001308"	"0.0002421"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVHPISTMIK"	"[R].rVHPISTMIk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"547.34076"	"1640.00772"	"1640.00819"	"-0.28"	"-0.00015"	"7/92"	"7"	"92"	"15634385.3875732"	"HCD"	"MS2"	"8.003294"	"492.1"	"100.000"	"30.0781"	"6723"	"6723"	"6698"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"927.3"	""	"792.0"	""	"791.4"	""	"500.3"	"0.6"	"773.0"	"864.3"	""	"345"	"40"	"32.000"	"25.000"	"0.001606161085182"	"15"	"0.0001308"	"0.0002336"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGQGTFGEVFK"	"[K].iGQGTFGEVFk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641Z4"	"Cyclin-dependent kinase 9 OS=Rattus norvegicus OX=10116 GN=Cdk9 PE=2 SV=1"	"Q641Z4"	"Cyclin-dependent kinase 9 OS=Rattus norvegicus OX=10116 GN=Cdk9 PE=2 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"820.97321"	"1640.93913"	"1640.94121"	"-1.27"	"-0.00104"	"10/102"	"10"	"102"	"637608.080383301"	"HCD"	"MS2"	"13.24377"	"68.2"	"100.000"	"56.0364"	"17285"	"17285"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.6"	""	"80.5"	""	"95.6"	""	"107.1"	""	"134.6"	"140.5"	""	"777"	"40"	"35.000"	"28.000"	"0.0042794802175684"	"28"	"0"	"0.0001039"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMGSPQLVAAVVR"	"[R].aLMGSPQLVAAVVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"547.66217"	"1640.97196"	"1640.97191"	"0.03"	"0.00002"	"16/118"	"16"	"118"	"3636459.58789063"	"HCD"	"MS2"	"22.21269"	"75.5"	"100.000"	"60.1724"	"19024"	"19024"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.7"	""	"104.2"	""	"106.9"	""	"130.3"	""	"139.7"	"140.6"	""	"566"	"50"	"34.000"	"27.000"	"0.000253972348843712"	""	"0"	"3.689E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMGSPQLVAAVVR"	"[R].aLMGSPQLVAAVVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"820.98969"	"1640.97209"	"1640.97191"	"0.11"	"0.00009"	"18/118"	"18"	"118"	"1553614.54559326"	"HCD"	"MS2"	"40.03326"	"81.2"	"100.000"	"60.0849"	"18988"	"18988"	"18964"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.4"	""	"120.6"	""	"123.8"	""	"109.2"	""	"142.4"	"156.6"	""	"575"	"20"	"34.000"	"27.000"	"0.288162755947396"	"14"	"0.0001889"	"0.0004459"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMGSPQLVAAVVR"	"[R].aLMGSPQLVAAVVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.9178"	"0.0000"	"1"	"1"	"1"	"820.98993"	"1640.97258"	"1640.97191"	"0.41"	"0.00033"	"12/118"	"12"	"118"	"1821194.29187012"	"HCD"	"MS2"	"15.84308"	"80.8"	"100.000"	"59.9148"	"18865"	"18865"	"18841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.8"	""	"114.9"	""	"115.5"	""	"101.3"	"1.8"	"146.6"	"176.5"	""	"565"	"73"	"34.000"	"27.000"	"1.41259756130996E-06"	"23"	"0"	"2.509E-07"	"1.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMGSPQLVAAVVR"	"[R].aLMGSPQLVAAVVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"0.8113"	"0.0000"	"1"	"1"	"1"	"547.66254"	"1640.97306"	"1640.97191"	"0.70"	"0.00038"	"15/118"	"15"	"118"	"3293190.90124512"	"HCD"	"MS2"	"19.6692"	"69.4"	"100.000"	"59.9954"	"18898"	"18898"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.5"	""	"96.6"	""	"109.8"	""	"104.4"	""	"126.3"	"130.8"	""	"560"	"53"	"34.000"	"27.000"	"0.000148647644384677"	"26"	"0"	"6.551E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMGSPQLVAAVVR"	"[R].aLMGSPQLVAAVVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"820.99097"	"1640.97466"	"1640.97191"	"1.67"	"0.00137"	"13/118"	"13"	"118"	"1756797.21429443"	"HCD"	"MS2"	"0"	"79.3"	"100.000"	"60.0369"	"18968"	"18968"	"18948"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.1"	""	"112.7"	""	"118.0"	""	"96.0"	"0.5"	"144.6"	"173.4"	""	"545"	"74"	"34.000"	"27.000"	"1.07489614815513E-06"	"23"	"0"	"1.917E-06"	"1.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGASLLPVLTK"	"[K].sPGASLLPVLTk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"821.02087"	"1641.03447"	"1641.03511"	"-0.39"	"-0.00032"	"14/108"	"14"	"108"	"1130649.23016357"	"HCD"	"MS2"	"39.25642"	"70.5"	"100.000"	"60.3987"	"19116"	"19116"	"19091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.3"	""	"94.6"	""	"110.6"	""	"103.4"	""	"120.0"	"140.0"	""	"244"	"48"	"30.000"	"23.000"	"0.000182540750043521"	"16"	"0"	"6.415E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGASLLPVLTK"	"[K].sPGASLLPVLTk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"547.68335"	"1641.03550"	"1641.03511"	"0.23"	"0.00013"	"13/108"	"13"	"108"	"4210314.25579834"	"HCD"	"MS2"	"36.67718"	"103.6"	"100.000"	"60.1453"	"18959"	"18959"	"18937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.8"	""	"140.6"	""	"155.3"	""	"161.2"	"0.7"	"189.6"	"194.6"	""	"244"	"49"	"30.000"	"23.000"	"0.000166096251260846"	"22"	"0"	"7.483E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGASLLPVLTK"	"[K].sPGASLLPVLTk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"547.68335"	"1641.03550"	"1641.03511"	"0.23"	"0.00013"	"13/108"	"13"	"108"	"4290888.12634277"	"HCD"	"MS2"	"46.99401"	"97.2"	"100.000"	"60.2741"	"19065"	"19065"	"19043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.6"	"2.0"	"127.5"	""	"138.9"	""	"160.0"	"0.2"	"173.5"	"182.8"	""	"244"	"41"	"30.000"	"23.000"	"0.00087369496045974"	"22"	"0"	"0.0001079"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGASLLPVLTK"	"[K].sPGASLLPVLTk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"821.02167"	"1641.03606"	"1641.03511"	"0.58"	"0.00047"	"17/108"	"17"	"108"	"1030825.25610352"	"HCD"	"MS2"	"30.56894"	"71.0"	"100.000"	"60.2814"	"19015"	"19015"	"18985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.2"	""	"94.4"	""	"117.5"	""	"106.5"	""	"137.0"	"128.4"	""	"244"	"45"	"30.000"	"23.000"	"0.000425951184883875"	"15"	"0"	"0.0001245"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGFYDECK"	"[R].iYGFYDEck.[R]"	"N-Term(TMT6plex); C8(Methylthio); K9(TMT6plex)"	"2"	"3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P63088; P62138; P62142"	"Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"821.40710"	"1641.80693"	"1641.80571"	"0.75"	"0.00061"	"7/66"	"7"	"66"	"768403.614135742"	"HCD"	"MS2"	"14.08909"	"80.6"	"100.000"	"62.0541"	"19792"	"19792"	"19763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.2"	""	"112.6"	""	"104.3"	""	"117.1"	""	"157.4"	"160.4"	""	"668"	"30"	"35.000"	"28.000"	"0.0352977048077362"	"27"	"0.0001889"	"0.0004922"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGFYDECK"	"[R].iYGFYDEck.[R]"	"N-Term(TMT6plex); C8(Methylthio); K9(TMT6plex)"	"2"	"3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P63088; P62138; P62142"	"Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"821.40778"	"1641.80828"	"1641.80571"	"1.56"	"0.00128"	"7/66"	"7"	"66"	"860939.016967773"	"HCD"	"MS2"	"7.074559"	"85.8"	"100.000"	"61.8813"	"19668"	"19668"	"19641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.7"	""	"126.0"	""	"116.3"	""	"121.2"	""	"153.7"	"174.1"	""	"670"	"29"	"35.000"	"28.000"	"0.0438575944204801"	"20"	"0.0001889"	"0.0005969"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATQLTGPVMPIR"	"[K].lATQLTGPVmPIR.[N]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"821.48145"	"1641.95561"	"1641.95593"	"-0.19"	"-0.00016"	"9/120"	"9"	"120"	"945529.491271973"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"46.6495"	"13477"	"13477"	"13448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.3"	""	"67.1"	""	"67.2"	""	"86.5"	"2.7"	"68.3"	"54.9"	""	"691"	"43"	"35.000"	"28.000"	"0.00182157917121585"	"24"	"0.00103"	"0.01276"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATQLTGPVMPIR"	"[K].lATQLTGPVmPIR.[N]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"821.48151"	"1641.95574"	"1641.95593"	"-0.12"	"-0.00010"	"10/120"	"10"	"120"	"1013272.4810791"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"46.9043"	"13629"	"13629"	"13602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.1"	""	"59.4"	""	"70.9"	""	"93.2"	"2.2"	"64.8"	"53.6"	""	"691"	"60"	"35.000"	"28.000"	"3.22439360925361E-05"	"26"	"0.0002723"	"0.001362"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEVQGSRPGK"	"[R].lLEVQGSRPGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"548.00574"	"1642.00266"	"1642.00521"	"-1.55"	"-0.00085"	"8/100"	"8"	"100"	"7356967.17999268"	"HCD"	"MS2"	"17.02688"	"373.9"	"100.000"	"34.1297"	"8413"	"8413"	"8401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"573.1"	""	"586.3"	""	"614.8"	""	"526.2"	""	"616.3"	"620.0"	""	"404"	"27"	"33.000"	"26.000"	"0.0376141601605899"	"18"	"0"	"0.0001434"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEVQGSRPGK"	"[R].lLEVQGSRPGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"P62138"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"548.00641"	"1642.00467"	"1642.00521"	"-0.33"	"-0.00018"	"9/100"	"9"	"100"	"6261428.91925049"	"HCD"	"MS2"	"10.50337"	"363.2"	"100.000"	"34.0632"	"8342"	"8342"	"8332"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"547.2"	""	"562.3"	""	"564.5"	""	"532.6"	""	"609.0"	"620.3"	""	"404"	"17"	"33.000"	"26.000"	"0.367579573439217"	"16"	"0.0001308"	"0.0002375"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYTMTPLLGQR"	"[R].sFYTMTPLLGQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"821.94373"	"1642.88017"	"1642.88243"	"-1.37"	"-0.00113"	"7/100"	"7"	"100"	"1469704.67114258"	"HCD"	"MS2"	"0"	"90.8"	"100.000"	"59.8320"	"18831"	"18831"	"18809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.6"	""	"155.2"	""	"142.0"	""	"111.8"	""	"154.6"	"160.3"	""	"939"	"26"	"36.000"	"29.000"	"0.118477422267963"	"15"	"0.0001889"	"0.0008089"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYTMTPLLGQR"	"[R].sFYTMTPLLGQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"548.29846"	"1642.88083"	"1642.88243"	"-0.97"	"-0.00053"	"12/100"	"12"	"100"	"4153299.08435059"	"HCD"	"MS2"	"47.01409"	"50.5"	"100.000"	"59.7356"	"18845"	"18845"	"18821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.6"	""	"76.2"	""	"79.6"	""	"69.2"	"0.1"	"90.8"	"88.7"	""	"939"	"57"	"36.000"	"29.000"	"8.54349553117388E-05"	"22"	"0"	"4.445E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYTMTPLLGQR"	"[R].sFYTMTPLLGQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"821.94434"	"1642.88140"	"1642.88243"	"-0.63"	"-0.00052"	"10/100"	"10"	"100"	"2219515.25311279"	"HCD"	"MS2"	"0"	"123.3"	"100.000"	"59.7035"	"18832"	"18832"	"18805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"221.8"	""	"211.6"	""	"201.3"	""	"146.0"	"0.8"	"184.2"	"198.0"	""	"934"	"55"	"36.000"	"29.000"	"0.000132836333717818"	"16"	"0"	"7.047E-06"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYTMTPLLGQR"	"[R].sFYTMTPLLGQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"821.94476"	"1642.88225"	"1642.88243"	"-0.11"	"-0.00009"	"9/100"	"9"	"100"	"1860236.90533447"	"HCD"	"MS2"	"0"	"109.1"	"100.000"	"59.5286"	"18707"	"18707"	"18681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.2"	""	"179.2"	""	"176.1"	""	"121.6"	"2.7"	"175.2"	"175.8"	""	"931"	"42"	"36.000"	"29.000"	"0.00315442121792769"	"15"	"0"	"1.924E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYTMTPLLGQR"	"[R].sFYTMTPLLGQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"548.29932"	"1642.88340"	"1642.88243"	"0.59"	"0.00032"	"12/100"	"12"	"100"	"2950876.88574219"	"HCD"	"MS2"	"0"	"42.6"	"100.000"	"59.5401"	"18712"	"18712"	"18681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.1"	""	"69.3"	""	"62.5"	""	"64.7"	""	"73.4"	"70.6"	""	"939"	"42"	"36.000"	"29.000"	"0.00272668894026256"	"18"	"0"	"5.577E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYTMTPLLGQR"	"[R].sFYTMTPLLGQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"548.29956"	"1642.88413"	"1642.88243"	"1.03"	"0.00057"	"10/100"	"10"	"100"	"1416875.51531982"	"HCD"	"MS2"	"42.88494"	"44.2"	"100.000"	"60.0481"	"18973"	"18973"	"18948"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.1"	""	"66.2"	""	"61.6"	""	"71.8"	"0.9"	"81.2"	"83.4"	""	"941"	"25"	"36.000"	"29.000"	"0.146406253660838"	"20"	"0.0001889"	"0.0004333"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPANWTNPSGK"	"[K].iPANWTNPSGk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.8548"	"0.0000"	"1"	"1"	"1"	"821.96863"	"1642.92998"	"1642.93171"	"-1.05"	"-0.00087"	"9/100"	"9"	"100"	"1079004.67858887"	"HCD"	"MS2"	"0"	"58.4"	"100.000"	"45.1863"	"12931"	"12931"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.5"	""	"75.0"	""	"80.5"	""	"88.4"	""	"119.2"	"111.9"	""	"847"	"62"	"36.000"	"29.000"	"2.99125484230364E-05"	"26"	"0"	"2.519E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPANWTNPSGK"	"[K].iPANWTNPSGk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.9483"	"0.0000"	"1"	"1"	"1"	"821.96899"	"1642.93071"	"1642.93171"	"-0.61"	"-0.00050"	"10/100"	"10"	"100"	"1190081.59222412"	"HCD"	"MS2"	"0"	"66.0"	"100.000"	"44.9795"	"12798"	"12798"	"12768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.6"	""	"90.5"	""	"76.8"	""	"104.8"	""	"132.5"	"122.4"	""	"845"	"58"	"36.000"	"29.000"	"7.3422085014661E-05"	"19"	"0"	"3.174E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGFLSIEPLDLR"	"[R].gPGFLSIEPLDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"548.31592"	"1642.93320"	"1642.93657"	"-2.05"	"-0.00112"	"14/106"	"14"	"106"	"2128545.39923096"	"HCD"	"MS2"	"47.78692"	"26.0"	"100.000"	"71.3861"	"23593"	"23593"	"23562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.3"	""	"32.4"	""	"34.6"	""	"48.0"	"1.5"	"49.7"	"41.5"	""	"829"	"52"	"36.000"	"29.000"	"0.000235247238941843"	"26"	"0"	"0.0001357"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGFLSIEPLDLR"	"[R].gPGFLSIEPLDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"548.31659"	"1642.93521"	"1642.93657"	"-0.83"	"-0.00045"	"7/106"	"7"	"106"	"2678021.16937256"	"HCD"	"MS2"	"34.83216"	"32.8"	"100.000"	"71.4891"	"23583"	"23583"	"23555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.2"	""	"42.8"	""	"47.1"	""	"56.4"	""	"62.4"	"57.1"	""	"811"	"28"	"36.000"	"29.000"	"0.0650116005924812"	"23"	"7.476E-05"	"0.0001984"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGFLSIEPLDLR"	"[R].gPGFLSIEPLDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"821.97150"	"1642.93572"	"1642.93657"	"-0.52"	"-0.00043"	"11/106"	"11"	"106"	"2256846.05279541"	"HCD"	"MS2"	"14.93037"	"102.8"	"100.000"	"71.4003"	"23598"	"23598"	"23578"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.3"	""	"153.2"	"2.4"	"120.9"	""	"182.6"	"1.0"	"147.7"	"159.1"	""	"821"	"64"	"36.000"	"29.000"	"1.56788123179839E-05"	"26"	"0"	"5.486E-06"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGFLSIEPLDLR"	"[R].gPGFLSIEPLDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"821.97205"	"1642.93682"	"1642.93657"	"0.15"	"0.00012"	"8/106"	"8"	"106"	"2015441.7756958"	"HCD"	"MS2"	"10.84633"	"105.4"	"100.000"	"71.4710"	"23575"	"23575"	"23555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.3"	""	"163.1"	""	"125.8"	""	"193.3"	""	"167.3"	"162.5"	""	"858"	"27"	"36.000"	"29.000"	"0.0927806246678892"	"16"	"0.0001308"	"0.000286"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSVLEAVK"	"[R].vNLLSVLEAVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"548.35443"	"1643.04874"	"1643.05076"	"-1.23"	"-0.00067"	"10/104"	"10"	"104"	"372562.555664063"	"HCD"	"MS2"	"17.06022"	"9.0"	"100.000"	"88.7719"	"30623"	"30623"	"30612"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"10.7"	""	"14.5"	""	"18.2"	""	"18.7"	"16.1"	""	"237"	"38"	"30.000"	"23.000"	"0.00193516655825479"	"16"	"0.0001308"	"0.0003115"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSVLEAVK"	"[R].vNLLSVLEAVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.02844"	"1643.04961"	"1643.05076"	"-0.70"	"-0.00058"	"12/104"	"12"	"104"	"217276.081787109"	"HCD"	"MS2"	"43.07057"	"15.8"	"100.000"	"88.7882"	"30630"	"30630"	"30619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.9"	""	"22.4"	""	"22.8"	""	"28.7"	""	"28.3"	"33.7"	""	"231"	"33"	"30.000"	"23.000"	"0.00538991584263003"	"15"	"0"	"0.0001104"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSVLEAVK"	"[R].vNLLSVLEAVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"548.35474"	"1643.04966"	"1643.05076"	"-0.67"	"-0.00037"	"12/104"	"12"	"104"	"1193116.23010254"	"HCD"	"MS2"	"5.042679"	"31.5"	"100.000"	"89.0361"	"30719"	"30719"	"30713"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.8"	""	"30.4"	""	"51.0"	""	"55.8"	""	"55.2"	"71.3"	""	"231"	"48"	"30.000"	"23.000"	"0.000203508233360543"	"21"	"0"	"2.063E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSVLEAVK"	"[R].vNLLSVLEAVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"548.35480"	"1643.04984"	"1643.05076"	"-0.56"	"-0.00031"	"10/104"	"10"	"104"	"325764.930908203"	"HCD"	"MS2"	"12.05063"	"9.3"	"100.000"	"88.6667"	"30542"	"30542"	"30531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"15.7"	""	"14.6"	""	"14.8"	""	"19.7"	"14.0"	""	"230"	"40"	"30.000"	"23.000"	"0.00117949971518912"	"20"	"0"	"0.000157"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSVLEAVK"	"[R].vNLLSVLEAVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"822.02863"	"1643.04997"	"1643.05076"	"-0.48"	"-0.00039"	"12/104"	"12"	"104"	"195777.619567871"	"HCD"	"MS2"	"46.90164"	"15.5"	"100.000"	"88.6598"	"30539"	"30539"	"30531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.6"	""	"17.5"	""	"21.5"	""	"23.9"	""	"32.9"	"34.3"	""	"230"	"32"	"30.000"	"23.000"	"0.00737391013072936"	"16"	"0.0001308"	"0.0003074"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSVLEAVK"	"[R].vNLLSVLEAVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"3"	"3"	"0.8491"	"0.0000"	"1"	"1"	"1"	"548.35504"	"1643.05057"	"1643.05076"	"-0.12"	"-0.00006"	"13/104"	"13"	"104"	"1171385.19024658"	"HCD"	"MS2"	"5.825994"	"29.1"	"100.000"	"88.9254"	"30634"	"30634"	"30628"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.3"	""	"36.0"	""	"43.1"	""	"50.9"	""	"52.9"	"64.0"	""	"230"	"53"	"30.000"	"23.000"	"5.17246833127281E-05"	""	"0"	"2.317E-05"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSVLEAVK"	"[R].vNLLSVLEAVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.8902"	"0.0000"	"1"	"1"	"1"	"822.02917"	"1643.05107"	"1643.05076"	"0.19"	"0.00015"	"10/104"	"10"	"104"	"624727.240661621"	"HCD"	"MS2"	"1.553447"	"48.4"	"100.000"	"89.0456"	"30722"	"30722"	"30718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.6"	""	"55.2"	""	"66.9"	""	"85.6"	"1.7"	"91.4"	"104.5"	""	"229"	"82"	"30.000"	"23.000"	"7.01141198524866E-08"	""	"0"	"1.107E-06"	"1.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSVLEAVK"	"[R].vNLLSVLEAVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"822.02917"	"1643.05107"	"1643.05076"	"0.19"	"0.00015"	"10/104"	"10"	"104"	"635897.847106934"	"HCD"	"MS2"	"3.580702"	"47.3"	"100.000"	"88.9210"	"30633"	"30633"	"30628"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.2"	""	"51.3"	""	"64.5"	""	"92.7"	""	"86.8"	"99.5"	""	"229"	"82"	"30.000"	"23.000"	"8.06873563967384E-08"	""	"0"	"2.122E-06"	"1.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPEDILK"	"[R].kIPEDILk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D4AD37"	"Inositol monophosphatase 3 OS=Rattus norvegicus OX=10116 GN=Impad1 PE=3 SV=1"	"D4AD37"	"Inositol monophosphatase 3 OS=Rattus norvegicus OX=10116 GN=Impad1 PE=3 SV=1"	"1"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"548.36182"	"1643.07090"	"1643.07105"	"-0.10"	"-0.00005"	"7/72"	"7"	"72"	"7633641.99102783"	"HCD"	"MS2"	"23.73281"	"390.7"	"100.000"	"41.6759"	"11461"	"11461"	"11435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"483.0"	""	"498.4"	""	"563.6"	""	"678.3"	""	"732.6"	"749.9"	""	"159"	"5"	"29.000"	"22.000"	"2.74389272772006"	"15"	"0.001217"	"0.01674"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDVALVVEAKTK"	"[R].lEDVALVVEAKTK.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"1"	"3"	"3"	"0.2545"	"0.0000"	"1"	"1"	"1"	"548.67065"	"1643.99741"	"1643.97810"	"11.74"	"0.00644"	"13/120"	"13"	"120"	"515640.476623535"	"HCD"	"MS2"	"20.23579"	"26.5"	"100.000"	"66.5145"	"21613"	"21613"	"21587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.5"	""	"31.1"	""	"37.4"	""	"45.6"	"1.6"	"57.3"	"51.5"	""	"613"	"55"	"34.000"	"27.000"	"0.00010578655610644"	""	"0.0006037"	"0.004502"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTLEEIQK"	"[K].yYTLEEIQk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"3"	"822.96899"	"1644.93071"	"1644.92489"	"3.54"	"0.00291"	"8/72"	"8"	"72"	"1314624.96588135"	"HCD"	"MS2"	"0"	"82.4"	"100.000"	"48.5806"	"14267"	"14267"	"14239"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.6"	""	"123.1"	""	"145.2"	""	"76.9"	"2.3"	"141.9"	"157.8"	""	"1120"	"6"	"37.000"	"30.000"	"13.9697304708805"	"15"	"0.0002277"	"0.001144"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQSLLDIQEK"	"[R].iQSLLDIQEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4VSI4"	"Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus OX=10116 GN=Usp7 PE=1 SV=1"	"Q4VSI4"	"Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus OX=10116 GN=Usp7 PE=1 SV=1"	"0"	"3"	"3"	"0.5806"	"0.0000"	"1"	"1"	"1"	"549.00220"	"1644.99204"	"1644.99364"	"-0.98"	"-0.00053"	"10/100"	"10"	"100"	"872644.954406738"	"HCD"	"MS2"	"18.88476"	"39.5"	"100.000"	"62.5660"	"20001"	"20001"	"19971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.3"	""	"57.1"	""	"49.2"	""	"63.9"	"0.9"	"75.1"	"79.6"	""	"621"	"31"	"34.000"	"27.000"	"0.0230176829923935"	""	"0.0003839"	"0.001854"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQSLLDIQEK"	"[R].iQSLLDIQEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4VSI4"	"Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus OX=10116 GN=Usp7 PE=1 SV=1"	"Q4VSI4"	"Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus OX=10116 GN=Usp7 PE=1 SV=1"	"0"	"3"	"3"	"0.6739"	"0.0000"	"1"	"1"	"1"	"549.00256"	"1644.99314"	"1644.99364"	"-0.31"	"-0.00017"	"11/100"	"11"	"100"	"1147420.69616699"	"HCD"	"MS2"	"52.09362"	"49.3"	"100.000"	"62.3600"	"19864"	"19864"	"19833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.5"	""	"61.1"	""	"65.9"	""	"85.4"	"0.5"	"96.9"	"97.7"	""	"607"	"46"	"34.000"	"27.000"	"0.000709837101933113"	""	"0"	"0.0001643"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQNILEVEK"	"[K].tLQNILEVEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"549.00281"	"1644.99387"	"1644.99364"	"0.14"	"0.00008"	"11/102"	"11"	"102"	"2470795.71923828"	"HCD"	"MS2"	"33.55265"	"77.3"	"100.000"	"57.2183"	"17768"	"17768"	"17739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.7"	""	"100.5"	""	"110.4"	""	"118.8"	"1.7"	"140.9"	"161.0"	""	"605"	"38"	"34.000"	"27.000"	"0.00482753442039112"	"22"	"0.0001308"	"0.0003014"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQNILEVEK"	"[K].tLQNILEVEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"0"	"2"	"2"	"0.6825"	"0.0000"	"1"	"1"	"1"	"823.00085"	"1644.99443"	"1644.99364"	"0.48"	"0.00039"	"18/102"	"18"	"102"	"678046.365783691"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"57.2114"	"17765"	"17765"	"17739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.6"	""	"79.6"	""	"75.0"	""	"111.7"	"3.1"	"113.4"	"127.7"	""	"605"	"63"	"34.000"	"27.000"	"1.52308934158341E-05"	""	"0"	"9.747E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETPVLPPVLVPR"	"[R].vETPVLPPVLVPR.[H]"	"N-Term(TMT6plex)"	"2"	"3"	"O70436; P84025"	"Mothers against decapentaplegic homolog 2 OS=Rattus norvegicus OX=10116 GN=Smad2 PE=1 SV=1;Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus OX=10116 GN=Smad3 PE=1 SV=1"	"O70436; P84025; O54835"	"Mothers against decapentaplegic homolog 2 OS=Rattus norvegicus OX=10116 GN=Smad2 PE=1 SV=1; Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus OX=10116 GN=Smad3 PE=1 SV=1; Mothers against decapentaplegic homolog 9 OS=Rattus norvegicus OX=10116 GN=Smad9 PE=1 SV=1"	"0"	"3"	"3"	"0.0625"	"0.0000"	"1"	"1"	"1"	"549.01306"	"1645.02463"	"1645.02499"	"-0.22"	"-0.00012"	"9/98"	"9"	"98"	"2667891.62451172"	"HCD"	"MS2"	"14.31588"	"59.6"	"100.000"	"65.8030"	"21270"	"21270"	"21241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.4"	""	"79.6"	""	"85.1"	""	"91.3"	"3.8"	"111.9"	"104.6"	""	"475"	"16"	"33.000"	"26.000"	"0.65262486136182"	"16"	"0.0001308"	"0.0002266"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAQLNGVVK"	"[R].kAQLnGVVk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); N5(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q06606"	"Granzyme-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mcpt10 PE=2 SV=1"	"Q06606"	"Granzyme-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mcpt10 PE=2 SV=1"	"1"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"549.02466"	"1645.05942"	"1645.06155"	"-1.30"	"-0.00071"	"10/82"	"10"	"82"	"7415713.82666016"	"HCD"	"MS2"	"38.64092"	"439.2"	"100.000"	"34.2720"	"8470"	"8470"	"8452"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"747.0"	""	"754.3"	""	"561.4"	""	"647.1"	""	"654.3"	"789.7"	""	"277"	"11"	"31.000"	"24.000"	"1.10014460509313"	"13"	"0.0001308"	"0.0002087"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGmGQk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.6491"	"0.0000"	"1"	"1"	"1"	"549.30121"	"1645.88907"	"1645.89184"	"-1.68"	"-0.00092"	"16/100"	"16"	"100"	"5553991.79901123"	"HCD"	"MS2"	"49.76056"	"121.0"	"100.000"	"25.3932"	"4895"	"4895"	"4871"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.0"	""	"187.1"	""	"158.6"	""	"128.7"	""	"219.4"	"247.5"	""	"1180"	"57"	"37.000"	"30.000"	"0.000130873588768213"	"20"	"0"	"3.305E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.4333"	"0.0000"	"1"	"1"	"1"	"549.30157"	"1645.89017"	"1645.89184"	"-1.01"	"-0.00056"	"11/100"	"11"	"100"	"1993487.32501221"	"HCD"	"MS2"	"26.44383"	"89.6"	"100.000"	"27.6725"	"5782"	"5782"	"5756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.4"	""	"122.9"	""	"127.7"	""	"118.4"	"0.7"	"154.5"	"185.3"	""	"1196"	"30"	"37.000"	"30.000"	"0.0652681321196356"	"17"	"7.476E-05"	"0.000198"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.0333"	"0.0000"	"1"	"1"	"1"	"549.30157"	"1645.89017"	"1645.89184"	"-1.01"	"-0.00056"	"12/100"	"12"	"100"	"2013613.36090088"	"HCD"	"MS2"	"26.30738"	"84.5"	"100.000"	"28.9898"	"6324"	"6324"	"6304"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.4"	""	"114.5"	""	"111.6"	""	"113.3"	""	"162.2"	"175.0"	""	"1196"	"30"	"37.000"	"30.000"	"0.05580860718766"	"15"	"0"	"8.316E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGmGQk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0333"	"2"	"2"	"2"	"549.30157"	"1645.89017"	"1645.89184"	"-1.01"	"-0.00056"	"12/100"	"12"	"100"	"2013613.36090088"	"HCD"	"MS2"	"26.30738"	"84.5"	"100.000"	"28.9898"	"6324"	"6324"	"6304"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.4"	""	"114.5"	""	"111.6"	""	"113.3"	""	"162.2"	"175.0"	""	"1196"	"29"	"37.000"	"30.000"	"0.0773929113187091"	"15"	"0"	"0.0001059"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.4324"	"0.0000"	"1"	"1"	"1"	"549.30157"	"1645.89017"	"1645.89184"	"-1.01"	"-0.00056"	"14/100"	"14"	"100"	"3331787.62255859"	"HCD"	"MS2"	"9.002132"	"100.1"	"100.000"	"27.2002"	"5625"	"5625"	"5618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.4"	""	"171.9"	""	"173.2"	""	"103.9"	"0.8"	"158.2"	"167.3"	""	"1196"	"37"	"37.000"	"30.000"	"0.0108818111344877"	"17"	"0"	"6.127E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.5217"	"0.0000"	"1"	"1"	"1"	"549.30157"	"1645.89017"	"1645.89184"	"-1.01"	"-0.00056"	"9/100"	"9"	"100"	"5161521.58227539"	"HCD"	"MS2"	"9.133556"	"139.2"	"100.000"	"27.1534"	"5570"	"5570"	"5556"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.8"	""	"243.4"	""	"228.6"	""	"131.5"	""	"223.1"	"243.6"	""	"1196"	"46"	"37.000"	"30.000"	"0.00145445799742614"	"15"	"0"	"7.932E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"549.30157"	"1645.89017"	"1645.89184"	"-1.01"	"-0.00056"	"11/100"	"11"	"100"	"4560228.24841309"	"HCD"	"MS2"	"17.44618"	"207.0"	"100.000"	"27.5657"	"5773"	"5773"	"5746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.1"	""	"305.1"	""	"306.2"	""	"208.6"	""	"382.2"	"408.3"	""	"1196"	"9"	"37.000"	"30.000"	"8.02973446760442"	"14"	"0.0002277"	"0.001191"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGmGQk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"549.30157"	"1645.89017"	"1645.89184"	"-1.01"	"-0.00056"	"13/100"	"13"	"100"	"5793940.17199707"	"HCD"	"MS2"	"0"	"132.4"	"100.000"	"25.3667"	"4849"	"4849"	"4825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.2"	""	"213.6"	""	"188.5"	""	"134.5"	"1.5"	"231.5"	"269.3"	""	"1196"	"35"	"37.000"	"30.000"	"0.0182264120379753"	"16"	"0"	"0.0001063"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"823.44879"	"1645.89031"	"1645.89184"	"-0.93"	"-0.00077"	"7/100"	"7"	"100"	"150519.50769043"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"27.2437"	"5642"	"5642"	"5627"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.3"	""	"19.6"	""	"13.0"	""	"6.0"	""	"16.7"	"18.5"	""	"1200"	"34"	"37.000"	"30.000"	"0.023235458695297"	"15"	"0.0004166"	"0.002202"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGmGQk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7174"	"0.0000"	"1"	"1"	"1"	"549.30164"	"1645.89035"	"1645.89184"	"-0.90"	"-0.00049"	"14/100"	"14"	"100"	"1552226.8427124"	"HCD"	"MS2"	"0"	"60.6"	"100.000"	"26.3002"	"5225"	"5225"	"5202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.9"	""	"82.1"	""	"84.2"	""	"78.6"	"1.6"	"117.5"	"124.1"	""	"1200"	"46"	"37.000"	"30.000"	"0.0016525372220029"	"19"	"0"	"7.432E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"549.30176"	"1645.89072"	"1645.89184"	"-0.68"	"-0.00037"	"12/100"	"12"	"100"	"4706069.58044434"	"HCD"	"MS2"	"6.076464"	"202.1"	"100.000"	"29.7640"	"6594"	"6594"	"6572"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.2"	""	"294.1"	""	"275.4"	""	"250.6"	"3.9"	"357.9"	"397.5"	""	"1193"	"27"	"37.000"	"30.000"	"0.112359668188067"	"14"	"0"	"0.0001122"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.4074"	"0.0000"	"1"	"1"	"1"	"549.30182"	"1645.89090"	"1645.89184"	"-0.57"	"-0.00031"	"11/100"	"11"	"100"	"3902419.9730835"	"HCD"	"MS2"	"31.63228"	"183.9"	"100.000"	"27.9976"	"5950"	"5950"	"5921"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"259.7"	""	"261.6"	""	"252.9"	""	"246.8"	"1.4"	"343.2"	"377.6"	""	"1194"	"27"	"37.000"	"30.000"	"0.107888295322852"	"14"	"0.0001859"	"0.0003306"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.2059"	"0.0000"	"1"	"1"	"1"	"549.30188"	"1645.89109"	"1645.89184"	"-0.46"	"-0.00025"	"12/100"	"12"	"100"	"2442392.53149414"	"HCD"	"MS2"	"29.87703"	"102.8"	"100.000"	"28.9854"	"6280"	"6280"	"6269"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.9"	""	"129.5"	""	"147.3"	""	"140.4"	""	"185.9"	"212.3"	""	"1194"	"34"	"37.000"	"30.000"	"0.02393174304235"	"15"	"0"	"0.0001369"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"549.30188"	"1645.89109"	"1645.89184"	"-0.46"	"-0.00025"	"13/100"	"13"	"100"	"4727037.57440186"	"HCD"	"MS2"	"21.89507"	"206.1"	"100.000"	"29.8562"	"6673"	"6673"	"6650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.9"	""	"326.1"	""	"277.7"	""	"257.4"	""	"356.3"	"368.8"	""	"1194"	"19"	"37.000"	"30.000"	"0.756788163917134"	"15"	"0"	"0.0001613"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGmGQk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7174"	"0.0000"	"1"	"1"	"1"	"549.30194"	"1645.89127"	"1645.89184"	"-0.35"	"-0.00019"	"14/100"	"14"	"100"	"1638023.48095703"	"HCD"	"MS2"	"17.62671"	"64.6"	"100.000"	"26.4273"	"5314"	"5314"	"5286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.5"	""	"89.9"	""	"85.9"	""	"81.4"	"0.8"	"120.7"	"138.4"	""	"1193"	"46"	"37.000"	"30.000"	"0.00147438345250212"	"15"	"0"	"3.466E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGmGQk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"549.30206"	"1645.89164"	"1645.89184"	"-0.12"	"-0.00007"	"13/100"	"13"	"100"	"1584930.90942383"	"HCD"	"MS2"	"26.35382"	"72.8"	"100.000"	"26.8414"	"5447"	"5447"	"5416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.6"	""	"78.3"	""	"69.8"	""	"128.5"	""	"154.7"	"154.4"	""	"1187"	"38"	"37.000"	"30.000"	"0.00958121803476519"	"19"	"0"	"8.64E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGmGQk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"549.30225"	"1645.89219"	"1645.89184"	"0.21"	"0.00012"	"12/100"	"12"	"100"	"1823515.47564697"	"HCD"	"MS2"	"23.53994"	"92.2"	"100.000"	"26.8907"	"5503"	"5503"	"5479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.8"	""	"109.1"	""	"106.3"	""	"153.0"	""	"195.0"	"176.1"	""	"1186"	"34"	"37.000"	"30.000"	"0.0247773407421447"	"15"	"0"	"3.164E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.2903"	"0.0000"	"1"	"1"	"1"	"549.30231"	"1645.89237"	"1645.89184"	"0.32"	"0.00018"	"13/100"	"13"	"100"	"2436582.9675293"	"HCD"	"MS2"	"32.063"	"110.6"	"100.000"	"29.2055"	"6407"	"6407"	"6396"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.6"	""	"160.3"	""	"135.8"	""	"136.8"	"1.7"	"231.0"	"229.6"	""	"1138"	"31"	"37.000"	"30.000"	"0.0418901838474505"	"19"	"0.0001308"	"0.0002204"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGMGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"823.45007"	"1645.89287"	"1645.89184"	"0.63"	"0.00052"	"11/100"	"11"	"100"	"156487.144104004"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"27.2128"	"5594"	"5594"	"5575"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.2"	""	"29.3"	""	"19.7"	""	"10.1"	""	"29.8"	"22.7"	""	"1154"	"24"	"37.000"	"30.000"	"0.253032212616167"	"14"	"0.000523"	"0.003289"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYVSQVVHK"	"[K].dLYVSQVVHk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"549.32782"	"1645.96891"	"1645.96776"	"0.69"	"0.00038"	"8/88"	"8"	"88"	"9279185.28051758"	"HCD"	"MS2"	"51.65739"	"310.3"	"72.971"	"39.1867"	"10487"	"10487"	"10462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"410.1"	""	"427.6"	""	"416.8"	""	"519.7"	"18.7"	"567.9"	"580.3"	""	"810"	"48"	"36.000"	"29.000"	"0.000679915627339637"	"22"	"0"	"6.999E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVISQLNPYTLR"	"[K].iVISQLNPYTLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z173"	"Adhesion G protein-coupled receptor L3 OS=Rattus norvegicus OX=10116 GN=Adgrl3 PE=1 SV=1"	"Q9Z173"	"Adhesion G protein-coupled receptor L3 OS=Rattus norvegicus OX=10116 GN=Adgrl3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.49988"	"1645.99248"	"1645.98386"	"5.24"	"0.00431"	"9/114"	"9"	"114"	"387391.717102051"	"HCD"	"MS2"	"17.47472"	"29.9"	"100.000"	"62.5168"	"19928"	"19928"	"19897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.7"	""	"39.8"	""	"43.0"	""	"46.0"	"0.9"	"50.4"	"57.6"	""	"617"	"5"	"34.000"	"27.000"	"10.052062225912"	"13"	"0.006092"	"0.2155"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTIAVIEPIFK"	"[R].gTIAVIEPIFk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"549.34729"	"1646.02732"	"1646.02930"	"-1.21"	"-0.00066"	"11/90"	"11"	"90"	"9103174.7532959"	"HCD"	"MS2"	"6.722076"	"197.5"	"100.000"	"65.7970"	"21320"	"21320"	"21299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.8"	""	"311.5"	""	"296.7"	""	"267.0"	"0.4"	"315.6"	"389.2"	""	"404"	"42"	"33.000"	"26.000"	"0.00127453383584999"	"21"	"0"	"7.054E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTIAVIEPIFK"	"[R].gTIAVIEPIFk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"549.34766"	"1646.02842"	"1646.02930"	"-0.54"	"-0.00029"	"11/90"	"11"	"90"	"4224658.12896729"	"HCD"	"MS2"	"4.202699"	"98.5"	"100.000"	"66.1088"	"21447"	"21447"	"21427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.1"	""	"150.5"	""	"150.7"	""	"121.0"	""	"170.1"	"206.5"	""	"397"	"39"	"32.000"	"25.000"	"0.00247605627577224"	"23"	"0"	"6.07E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTIAVIEPIFK"	"[R].gTIAVIEPIFk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.9036"	"0.0000"	"1"	"1"	"1"	"823.51813"	"1646.02898"	"1646.02930"	"-0.20"	"-0.00016"	"10/90"	"10"	"90"	"2918970.59387207"	"HCD"	"MS2"	"0"	"183.0"	"100.000"	"66.1060"	"21446"	"21446"	"21427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.8"	""	"299.8"	""	"272.7"	""	"229.4"	"1.0"	"295.3"	"367.5"	""	"403"	"83"	"33.000"	"26.000"	"1.01455372670763E-07"	"26"	"0"	"3.65E-06"	"1.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTIAVIEPIFK"	"[R].gTIAVIEPIFk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"549.34796"	"1646.02933"	"1646.02930"	"0.02"	"0.00001"	"11/90"	"11"	"90"	"11471038.8664551"	"HCD"	"MS2"	"14.14587"	"263.7"	"100.000"	"65.8949"	"21307"	"21307"	"21289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"381.9"	""	"411.6"	""	"389.9"	""	"351.3"	""	"433.4"	"530.2"	""	"396"	"44"	"32.000"	"25.000"	"0.0008330387242012"	"22"	"0"	"8.29E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTIAVIEPIFK"	"[R].gTIAVIEPIFk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"823.51837"	"1646.02947"	"1646.02930"	"0.10"	"0.00008"	"9/90"	"9"	"90"	"2751837.53198242"	"HCD"	"MS2"	"2.428903"	"177.3"	"100.000"	"66.1714"	"21420"	"21420"	"21401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.6"	""	"274.2"	""	"267.6"	""	"232.6"	""	"273.2"	"365.1"	""	"396"	"66"	"32.000"	"25.000"	"5.12466157200312E-06"	"24"	"0"	"9.634E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTIAVIEPIFK"	"[R].gTIAVIEPIFk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"549.34802"	"1646.02951"	"1646.02930"	"0.13"	"0.00007"	"11/90"	"11"	"90"	"2916518.04223633"	"HCD"	"MS2"	"7.098076"	"75.7"	"100.000"	"66.2107"	"21436"	"21436"	"21417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.2"	""	"128.1"	""	"107.5"	""	"98.8"	""	"124.1"	"160.3"	""	"396"	"46"	"32.000"	"25.000"	"0.000552923680564993"	"23"	"0"	"4.023E-05"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTIAVIEPIFK"	"[R].gTIAVIEPIFk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"823.51862"	"1646.02995"	"1646.02930"	"0.40"	"0.00033"	"9/90"	"9"	"90"	"4740114.44866943"	"HCD"	"MS2"	"29.30072"	"298.6"	"100.000"	"65.8558"	"21291"	"21291"	"21273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"459.9"	""	"467.9"	""	"440.3"	""	"392.6"	""	"466.9"	"598.6"	""	"396"	"64"	"32.000"	"25.000"	"8.27304125960312E-06"	"24"	"0"	"3.147E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTIAVIEPIFK"	"[R].gTIAVIEPIFk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.9136"	"0.0000"	"1"	"1"	"1"	"823.51959"	"1646.03191"	"1646.02930"	"1.58"	"0.00130"	"10/90"	"10"	"90"	"6217807.64874268"	"HCD"	"MS2"	"22.98946"	"369.2"	"100.000"	"65.8016"	"21322"	"21322"	"21299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"572.0"	""	"601.5"	""	"552.7"	""	"479.6"	"0.8"	"577.5"	"708.1"	""	"391"	"81"	"32.000"	"25.000"	"1.73838818541229E-07"	"25"	"0"	"9.951E-06"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAVEALKK"	"[K].eAAVEALkk.[K]"	"N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.35339"	"1646.04563"	"1646.04557"	"0.04"	"0.00002"	"13/74"	"13"	"74"	"11381688.1601563"	"HCD"	"MS2"	"35.73321"	"584.0"	"100.000"	"36.1385"	"9236"	"9236"	"9209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"954.7"	""	"783.5"	""	"821.8"	""	"890.8"	""	"1076.8"	"1002.8"	""	"315"	"3"	"31.000"	"24.000"	"8.69521966867192"	"13"	"0.0001308"	"0.0002952"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAVEALKK"	"[K].eAAVEALkk.[K]"	"N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"1"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"549.35352"	"1646.04599"	"1646.04557"	"0.26"	"0.00014"	"7/74"	"7"	"74"	"11159868.119812"	"HCD"	"MS2"	"61.37624"	"598.0"	"100.000"	"36.0472"	"9155"	"9155"	"9130"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"975.9"	""	"800.2"	""	"835.9"	""	"940.5"	"2.5"	"1098.1"	"1007.0"	""	"315"	"8"	"31.000"	"24.000"	"2.23501559666032"	"18"	"0.0001889"	"0.0003915"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGDIEFPPPFGR"	"[K].wGDIEFPPPFGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"823.92969"	"1646.85210"	"1646.85284"	"-0.45"	"-0.00037"	"10/92"	"10"	"92"	"2676168.83300781"	"HCD"	"MS2"	"36.56067"	"128.7"	"100.000"	"77.8746"	"26230"	"26230"	"26213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.9"	""	"133.3"	""	"169.9"	""	"194.9"	""	"296.3"	"268.2"	""	"1040"	"25"	"37.000"	"30.000"	"0.166726004874284"	"19"	"0.0001889"	"0.0006201"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGDIEFPPPFGR"	"[K].wGDIEFPPPFGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"823.92993"	"1646.85259"	"1646.85284"	"-0.16"	"-0.00013"	"9/92"	"9"	"92"	"2364701.32641602"	"HCD"	"MS2"	"38.51228"	"113.0"	"100.000"	"77.9332"	"26202"	"26202"	"26185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.0"	""	"118.5"	""	"137.2"	""	"177.4"	"1.0"	"268.3"	"226.2"	""	"1053"	"32"	"37.000"	"30.000"	"0.0317978953366664"	"20"	"0"	"0.0001535"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSISDTYDLK"	"[K].fSISDTYDLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"823.95697"	"1646.90666"	"1646.90416"	"1.52"	"0.00125"	"10/84"	"10"	"84"	"406623.527404785"	"HCD"	"MS2"	"0"	"45.9"	"100.000"	"57.0984"	"17719"	"17719"	"17691"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.5"	""	"56.2"	""	"32.5"	""	"81.9"	""	"93.6"	"96.4"	""	"1185"	"18"	"37.000"	"30.000"	"0.992403654045663"	"20"	"0.002772"	"0.04447"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQVYTMAPPK"	"[R].gPQVYTMAPPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"549.64868"	"1646.93149"	"1646.93402"	"-1.54"	"-0.00084"	"5/96"	"5"	"96"	"16040118.2848511"	"HCD"	"MS2"	"11.82468"	"323.8"	"100.000"	"39.8191"	"10745"	"10745"	"10718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"401.5"	""	"437.9"	""	"528.6"	""	"383.5"	""	"598.0"	"724.8"	""	"1092"	"34"	"37.000"	"30.000"	"0.0228135380189055"	"18"	"0"	"3.886E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQVYTMAPPK"	"[R].gPQVYTMAPPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"823.96985"	"1646.93242"	"1646.93402"	"-0.97"	"-0.00080"	"8/96"	"8"	"96"	"2998731.39367676"	"HCD"	"MS2"	"0"	"184.9"	"100.000"	"39.8927"	"10775"	"10775"	"10750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"263.8"	""	"276.9"	""	"291.3"	""	"229.9"	"3.1"	"341.2"	"345.3"	""	"1092"	"49"	"37.000"	"30.000"	"0.000640018669589279"	"23"	"0"	"6.91E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQVYTMAPPK"	"[R].gPQVYTMAPPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"823.96997"	"1646.93266"	"1646.93402"	"-0.82"	"-0.00068"	"8/96"	"8"	"96"	"3252836.14831543"	"HCD"	"MS2"	"0"	"216.3"	"100.000"	"39.7121"	"10660"	"10660"	"10630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"284.3"	""	"309.9"	""	"350.0"	""	"279.4"	""	"396.3"	"430.6"	""	"1092"	"50"	"37.000"	"30.000"	"0.000578352533946799"	"22"	"0"	"5.101E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQVYTMAPPK"	"[R].gPQVYTMAPPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"549.64923"	"1646.93314"	"1646.93402"	"-0.53"	"-0.00029"	"5/96"	"5"	"96"	"17869088.1134033"	"HCD"	"MS2"	"15.65459"	"249.0"	"68.129"	"39.7029"	"10656"	"10656"	"10630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.4"	""	"325.3"	""	"414.8"	""	"304.2"	""	"478.7"	"544.2"	""	"1073"	"34"	"37.000"	"30.000"	"0.0225200694911175"	"16"	"0"	"4.178E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEFLLHMLK"	"[K].sAEFLLHMLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"549.66180"	"1646.97086"	"1646.97041"	"0.28"	"0.00015"	"6/76"	"6"	"76"	"7207201.45257568"	"HCD"	"MS2"	"19.51575"	"196.0"	"100.000"	"64.7586"	"20843"	"20843"	"20825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.6"	""	"274.0"	""	"310.9"	""	"270.4"	""	"382.2"	"340.7"	""	"845"	"36"	"36.000"	"29.000"	"0.0116366162716037"	"21"	"0"	"3.463E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEFLLHMLK"	"[K].sAEFLLHMLk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"549.66217"	"1646.97196"	"1646.97041"	"0.94"	"0.00052"	"8/76"	"8"	"76"	"7342087.8170166"	"HCD"	"MS2"	"21.03303"	"197.5"	"100.000"	"64.7391"	"20888"	"20888"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.7"	""	"306.2"	""	"337.4"	""	"263.8"	""	"368.0"	"350.7"	""	"853"	"31"	"36.000"	"29.000"	"0.0338001817449921"	"22"	"0"	"6.543E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAFGKPQGTVAR"	"[R].gAFGkPQGTVAR.[V]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.66223"	"1646.97214"	"1646.97425"	"-1.28"	"-0.00070"	"13/102"	"13"	"102"	"36269055.2799072"	"HCD"	"MS2"	"10.00689"	"897.4"	"55.926"	"29.5101"	"6531"	"6531"	"6516"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1490.7"	""	"1362.3"	""	"1393.9"	""	"1350.9"	"1.7"	"1463.6"	"1418.3"	""	"853"	"12"	"36.000"	"29.000"	"2.54049904215123"	"13"	"0"	"7.27E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAFGKPQGTVAR"	"[R].gAFGkPQGTVAR.[V]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.66248"	"1646.97287"	"1646.97425"	"-0.83"	"-0.00046"	"12/102"	"12"	"102"	"23864705.0124512"	"HCD"	"MS2"	"21.59626"	"1151.5"	"100.000"	"29.4292"	"6457"	"6457"	"6438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1875.4"	""	"1775.0"	""	"1767.2"	""	"1759.7"	"6.1"	"1913.6"	"1787.9"	""	"847"	"14"	"36.000"	"29.000"	"1.66668456955522"	"13"	"0"	"8.041E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAFGKPQGTVAR"	"[R].gAFGkPQGTVAR.[V]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.99011"	"1646.97295"	"1646.97425"	"-0.79"	"-0.00065"	"10/102"	"10"	"102"	"330009.618225098"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"29.5698"	"6556"	"6556"	"6528"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.8"	""	"39.2"	""	"34.3"	""	"35.7"	""	"43.5"	"35.7"	""	"847"	"15"	"36.000"	"29.000"	"1.22702500939151"	"13"	"0.003788"	"0.09015"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAFGKPQGTVAR"	"[R].gAFGkPQGTVAR.[V]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"Q6PDV7"	"60S ribosomal protein L10 OS=Rattus norvegicus OX=10116 GN=Rpl10 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.99048"	"1646.97368"	"1646.97425"	"-0.34"	"-0.00028"	"9/102"	"9"	"102"	"430819.357177734"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"29.4866"	"6481"	"6481"	"6454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.7"	""	"42.1"	""	"46.1"	""	"40.7"	""	"51.7"	"48.7"	""	"851"	"31"	"36.000"	"29.000"	"0.0361326292127952"	"14"	"0.0001889"	"0.000797"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIKPIDK"	"[K].fVIkPIDk.[K]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"824.04382"	"1647.08037"	"1647.08123"	"-0.52"	"-0.00043"	"6/64"	"6"	"64"	"1354861.25848389"	"HCD"	"MS2"	"21.89324"	"105.8"	"100.000"	"45.1103"	"12900"	"12900"	"12875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.0"	""	"131.7"	""	"136.7"	""	"179.4"	""	"205.7"	"229.8"	""	"130"	"25"	"28.000"	"21.000"	"0.0206972838912198"	"20"	"0.0006737"	"0.00663"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIKPIDK"	"[K].fVIkPIDk.[K]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"824.04388"	"1647.08049"	"1647.08123"	"-0.45"	"-0.00037"	"6/64"	"6"	"64"	"1126359.10150146"	"HCD"	"MS2"	"0"	"90.7"	"100.000"	"44.8875"	"12760"	"12760"	"12736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.2"	""	"109.4"	""	"104.1"	""	"159.8"	"1.1"	"178.0"	"199.9"	""	"130"	"26"	"28.000"	"21.000"	"0.0180681362404354"	"20"	"0.0006037"	"0.005936"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIKPIDK"	"[K].fVIkPIDk.[K]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.69843"	"1647.08072"	"1647.08123"	"-0.31"	"-0.00017"	"8/64"	"8"	"64"	"22556930.6074219"	"HCD"	"MS2"	"10.89947"	"539.9"	"41.113"	"45.3244"	"12988"	"12988"	"12971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"587.8"	""	"566.0"	""	"629.8"	""	"990.4"	""	"1122.1"	"1237.2"	""	"132"	"8"	"28.000"	"21.000"	"1.14959253643847"	"13"	"0.0003571"	"0.001487"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIKPIDK"	"[K].fVIkPIDk.[K]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.69855"	"1647.08109"	"1647.08123"	"-0.08"	"-0.00005"	"8/64"	"8"	"64"	"85818653.4138184"	"HCD"	"MS2"	"7.658475"	"2469.6"	"45.521"	"45.0114"	"12860"	"12860"	"12843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2963.2"	""	"2722.8"	""	"2756.0"	""	"4766.5"	""	"5120.2"	"5322.3"	""	"132"	"8"	"28.000"	"21.000"	"0.987515533022326"	"13"	"0.0003839"	"0.00162"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIKPIDK"	"[K].fVIkPIDk.[K]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.69867"	"1647.08146"	"1647.08123"	"0.14"	"0.00008"	"7/64"	"7"	"64"	"21933724.2155762"	"HCD"	"MS2"	"10.10851"	"676.3"	"52.519"	"45.0693"	"12834"	"12834"	"12816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"737.7"	""	"691.6"	""	"777.1"	""	"1211.7"	""	"1469.2"	"1546.5"	""	"131"	"8"	"28.000"	"21.000"	"1.13042381925358"	"13"	"0.0001889"	"0.0006861"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIKPIDK"	"[K].fVIkPIDk.[K]"	"N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.69897"	"1647.08237"	"1647.08123"	"0.70"	"0.00038"	"7/64"	"7"	"64"	"70916334.0413818"	"HCD"	"MS2"	"12.32504"	"2092.1"	"51.664"	"44.7564"	"12706"	"12706"	"12688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2544.5"	""	"2335.2"	""	"2373.4"	""	"3935.8"	""	"4339.2"	"4506.0"	""	"130"	"8"	"28.000"	"21.000"	"0.979294593021383"	"13"	"0.0002277"	"0.00136"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMFNPMYALFR"	"[R].eMFNPMYALFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P51593"	"E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Huwe1 PE=1 SV=2"	"P51593"	"E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Huwe1 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"824.41388"	"1647.82048"	"1647.82247"	"-1.21"	"-0.00099"	"5/94"	"5"	"94"	"157831.167663574"	"HCD"	"MS2"	"18.07171"	"13.8"	"100.000"	"80.9439"	"27430"	"27430"	"27408"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.3"	""	"18.0"	""	"23.4"	""	"21.1"	""	"19.8"	"24.4"	""	"704"	"24"	"35.000"	"28.000"	"0.151894715043373"	"21"	"0.0006737"	"0.006444"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMFNPMYALFR"	"[R].eMFNPMYALFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P51593"	"E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Huwe1 PE=1 SV=2"	"P51593"	"E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Huwe1 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"824.41437"	"1647.82146"	"1647.82247"	"-0.61"	"-0.00051"	"5/94"	"5"	"94"	"146399.97857666"	"HCD"	"MS2"	"29.78154"	"11.4"	"100.000"	"80.9433"	"27481"	"27481"	"27454"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.2"	""	"17.8"	""	"19.7"	""	"13.9"	""	"16.1"	"19.9"	""	"723"	"16"	"35.000"	"28.000"	"0.861208488173167"	"18"	"0.002953"	"0.05281"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHSFVGDDIFLR"	"[K].lHSFVGDDIFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"549.97430"	"1647.90836"	"1647.90561"	"1.67"	"0.00092"	"9/98"	"9"	"98"	"10318034.289917"	"HCD"	"MS2"	"32.89923"	"199.9"	"100.000"	"55.9445"	"17247"	"17247"	"17227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.8"	""	"259.9"	""	"274.9"	""	"359.2"	""	"376.0"	"404.5"	""	"1175"	"28"	"37.000"	"30.000"	"0.0833696293992341"	"15"	"0.0001308"	"0.0002302"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHSFVGDDIFLR"	"[K].lHSFVGDDIFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"549.97498"	"1647.91037"	"1647.90561"	"2.89"	"0.00159"	"9/98"	"9"	"98"	"10858291.2868042"	"HCD"	"MS2"	"34.66924"	"212.8"	"100.000"	"56.1573"	"17388"	"17388"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"236.2"	"2.6"	"282.8"	""	"294.2"	""	"374.1"	"0.2"	"399.6"	"428.9"	""	"1205"	"30"	"37.000"	"30.000"	"0.0636732549301229"	"16"	"0"	"0.0001764"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQELEDMLAK"	"[R].iQELEDMLAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"549.98389"	"1647.93711"	"1647.93916"	"-1.25"	"-0.00069"	"5/94"	"5"	"94"	"1453134.28863525"	"HCD"	"MS2"	"40.46606"	"42.0"	"100.000"	"74.0955"	"24699"	"24699"	"24671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.5"	""	"38.7"	""	"36.0"	""	"62.3"	"0.7"	"111.3"	"114.4"	""	"1135"	"28"	"37.000"	"30.000"	"0.0839394010285458"	"21"	"0"	"0.0001795"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQELEDMLAK"	"[R].iQELEDMLAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"824.47260"	"1647.93791"	"1647.93916"	"-0.76"	"-0.00063"	"8/94"	"8"	"94"	"653025.919372559"	"HCD"	"MS2"	"16.54116"	"51.5"	"100.000"	"74.1024"	"24702"	"24702"	"24671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.9"	""	"34.7"	""	"26.3"	""	"72.0"	""	"156.8"	"169.5"	""	"1121"	"29"	"37.000"	"30.000"	"0.0788089637274816"	"18"	"0"	"0.0001124"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQELEDMLAK"	"[R].iQELEDMLAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"549.98456"	"1647.93912"	"1647.93916"	"-0.03"	"-0.00001"	"11/94"	"11"	"94"	"1526413.862854"	"HCD"	"MS2"	"38.36504"	"46.1"	"100.000"	"74.1118"	"24654"	"24654"	"24625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.2"	""	"35.4"	""	"33.7"	""	"61.1"	""	"121.9"	"147.4"	""	"1084"	"28"	"37.000"	"30.000"	"0.0926828300778936"	"18"	"0"	"9.254E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQELEDMLAK"	"[R].iQELEDMLAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"824.47424"	"1647.94121"	"1647.93916"	"1.24"	"0.00102"	"9/94"	"9"	"94"	"544137.988342285"	"HCD"	"MS2"	"14.22672"	"50.0"	"100.000"	"74.1096"	"24653"	"24653"	"24625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.8"	""	"32.2"	""	"25.0"	""	"72.4"	"0.7"	"162.6"	"154.7"	""	"1064"	"59"	"37.000"	"30.000"	"6.80630853811804E-05"	"29"	"0"	"7.475E-06"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RRPLNTAPIQPR"	"[R].rRPLNTAPIQPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"412.75385"	"1647.99355"	"1647.99682"	"-1.99"	"-0.00082"	"4/110"	"4"	"110"	"46664345.3233643"	"HCD"	"MS2"	"0.4880112"	"158.8"	"47.646"	"23.9330"	"4264"	"4264"	"4251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.0"	""	"213.2"	""	"229.5"	""	"260.8"	""	"312.7"	"293.5"	""	"637"	"16"	"35.000"	"28.000"	"0.828150820868138"	"13"	"0.0001889"	"0.0005977"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RRPLNTAPIQPR"	"[R].rRPLNTAPIQPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.00275"	"1647.99369"	"1647.99682"	"-1.90"	"-0.00105"	"9/110"	"9"	"110"	"12694092.3491821"	"HCD"	"MS2"	"2.654535"	"111.3"	"100.000"	"23.9168"	"4257"	"4257"	"4239"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.5"	""	"155.9"	""	"177.6"	""	"184.6"	""	"199.9"	"207.8"	""	"637"	"14"	"35.000"	"28.000"	"1.26214553910357"	"13"	"0.0006037"	"0.005209"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RRPLNTAPIQPR"	"[R].rRPLNTAPIQPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"1"	"4"	"4"	"0.8571"	"0.0000"	"1"	"1"	"1"	"412.75424"	"1647.99514"	"1647.99682"	"-1.02"	"-0.00042"	"7/110"	"7"	"110"	"45024731.2146606"	"HCD"	"MS2"	"10.38585"	"220.8"	"68.387"	"23.9893"	"4320"	"4320"	"4302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.0"	""	"327.4"	""	"333.2"	""	"350.4"	"0.2"	"411.2"	"401.1"	""	"615"	"21"	"34.000"	"27.000"	"0.242016580331243"	"17"	"0.0001308"	"0.0002829"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RRPLNTAPIQPR"	"[R].rRPLNTAPIQPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.00342"	"1647.99570"	"1647.99682"	"-0.68"	"-0.00037"	"9/110"	"9"	"110"	"13768885.3811646"	"HCD"	"MS2"	"15.55269"	"122.9"	"100.000"	"23.9572"	"4307"	"4307"	"4291"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.3"	""	"183.6"	""	"175.3"	""	"206.4"	""	"207.2"	"224.5"	""	"608"	"34"	"34.000"	"27.000"	"0.0115844010311707"	"15"	"0"	"6.94E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RRPLNTAPIQPR"	"[R].rRPLNTAPIQPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.00354"	"1647.99607"	"1647.99682"	"-0.46"	"-0.00025"	"10/110"	"10"	"110"	"3285727.88800049"	"HCD"	"MS2"	"0"	"61.3"	"100.000"	"24.2741"	"4437"	"4437"	"4413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.1"	""	"85.8"	""	"74.7"	""	"112.2"	""	"109.9"	"112.6"	""	"586"	"24"	"34.000"	"27.000"	"0.12441353223627"	"14"	"0.0001859"	"0.000332"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RRPLNTAPIQPR"	"[R].rRPLNTAPIQPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.00366"	"1647.99643"	"1647.99682"	"-0.24"	"-0.00013"	"9/110"	"9"	"110"	"3425237.58239746"	"HCD"	"MS2"	"5.660697"	"63.3"	"100.000"	"24.2218"	"4382"	"4382"	"4358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.8"	""	"82.3"	""	"73.6"	""	"112.0"	"1.0"	"123.6"	"120.9"	""	"586"	"20"	"34.000"	"27.000"	"0.275338929995439"	"14"	"0.0001308"	"0.0003084"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIPETATLFK"	"[R].gIIPETATLFk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"824.50928"	"1648.01128"	"1648.00856"	"1.65"	"0.00136"	"9/86"	"9"	"86"	"1370600.73498535"	"HCD"	"MS2"	"0"	"112.3"	"100.000"	"64.8142"	"20866"	"20866"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.2"	""	"144.0"	""	"166.8"	""	"183.3"	"0.8"	"215.9"	"206.1"	""	"512"	"27"	"34.000"	"27.000"	"0.0498012180895401"	""	"0.0003146"	"0.001423"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEFWLISAPGEK"	"[M].tEFWLISAPGEk.[T]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.94391"	"1648.88054"	"1648.87839"	"1.30"	"0.00108"	"8/108"	"8"	"108"	"114013.806762695"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"85.6538"	"29350"	"29350"	"29321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"7.9"	""	"8.3"	""	"9.4"	""	"11.3"	"14.9"	""	"1107"	"20"	"37.000"	"30.000"	"0.542147706923715"	"14"	"0.0006037"	"0.005593"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGLTDEINFLR"	"[R].lEGLTDEINFLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"824.95898"	"1648.91069"	"1648.91075"	"-0.04"	"-0.00003"	"10/104"	"10"	"104"	"2401673.43725586"	"HCD"	"MS2"	"6.796124"	"128.3"	"100.000"	"74.9306"	"25040"	"25040"	"25023"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"189.6"	""	"146.2"	""	"176.2"	""	"197.5"	""	"226.4"	"281.4"	""	"1128"	"74"	"37.000"	"30.000"	"2.35656326788694E-06"	""	"0"	"1.564E-06"	"1.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGLTDEINFLR"	"[R].lEGLTDEINFLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8514"	"0.0000"	"1"	"1"	"1"	"824.95929"	"1648.91130"	"1648.91075"	"0.33"	"0.00028"	"10/104"	"10"	"104"	"2445661.24768066"	"HCD"	"MS2"	"5.135052"	"129.1"	"100.000"	"74.9123"	"24980"	"24980"	"24961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.6"	""	"158.5"	""	"169.4"	""	"205.5"	"2.5"	"237.8"	"266.5"	""	"1125"	"74"	"37.000"	"30.000"	"2.41614240055249E-06"	"28"	"0"	"2.583E-06"	"1.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGLTDEINFLR"	"[R].lEGLTDEINFLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"824.95984"	"1648.91240"	"1648.91075"	"1.00"	"0.00082"	"7/104"	"7"	"104"	"227285.457458496"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"75.2403"	"25114"	"25114"	"25089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.0"	""	"21.6"	""	"28.7"	""	"30.8"	"1.2"	"33.4"	"35.1"	""	"1103"	"25"	"37.000"	"30.000"	"0.191666193035928"	"25"	"0.0001859"	"0.0003586"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAPSGPSGTLK"	"[R].yLAPSGPSGTLk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"824.98743"	"1648.96758"	"1648.96743"	"0.09"	"0.00007"	"11/98"	"11"	"98"	"2062257.71765137"	"HCD"	"MS2"	"0"	"135.8"	"100.000"	"40.4994"	"10979"	"10979"	"10949"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.7"	""	"183.9"	""	"219.5"	""	"207.3"	""	"222.9"	"238.6"	""	"812"	"54"	"36.000"	"29.000"	"0.000145722305465872"	"21"	"0"	"8.317E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAPSGPSGTLK"	"[R].yLAPSGPSGTLk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"824.98785"	"1648.96843"	"1648.96743"	"0.61"	"0.00050"	"11/98"	"11"	"98"	"2103385.81384277"	"HCD"	"MS2"	"0"	"130.1"	"100.000"	"40.6715"	"11093"	"11093"	"11069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.8"	""	"164.8"	""	"221.2"	""	"194.1"	"1.5"	"181.2"	"233.7"	""	"813"	"72"	"36.000"	"29.000"	"2.54132699613316E-06"	"29"	"0"	"3.726E-06"	"1.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVMALGSLAVTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"550.34009"	"1649.00571"	"1649.00718"	"-0.89"	"-0.00049"	"8/108"	"8"	"108"	"2391926.14129639"	"HCD"	"MS2"	"24.48023"	"68.5"	"100.000"	"58.5391"	"18308"	"18308"	"18281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.5"	""	"90.9"	""	"93.7"	""	"78.9"	"1.0"	"151.6"	"145.8"	""	"515"	"64"	"34.000"	"27.000"	"1.04178292112091E-05"	""	"0"	"9.744E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVMALGSLAVTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"825.00653"	"1649.00578"	"1649.00718"	"-0.85"	"-0.00070"	"10/108"	"10"	"108"	"701292.940612793"	"HCD"	"MS2"	"0"	"58.0"	"100.000"	"58.6786"	"18415"	"18415"	"18389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.9"	""	"76.1"	""	"86.9"	""	"72.4"	""	"130.6"	"123.8"	""	"517"	"85"	"34.000"	"27.000"	"8.17448775153526E-08"	""	"0"	"1.105E-06"	"1.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVMALGSLAVTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.2727"	"0.0000"	"1"	"1"	"1"	"550.34045"	"1649.00681"	"1649.00718"	"-0.23"	"-0.00013"	"9/108"	"9"	"108"	"13200484.3192139"	"HCD"	"MS2"	"5.011052"	"320.3"	"100.000"	"58.1768"	"18159"	"18159"	"18139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"388.6"	""	"461.2"	""	"482.2"	""	"339.5"	""	"722.9"	"652.9"	""	"506"	"44"	"34.000"	"27.000"	"0.00103781638055612"	""	"0"	"2.389E-05"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVMALGSLAVTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"550.34058"	"1649.00718"	"1649.00718"	"-0.01"	"0.00000"	"8/108"	"8"	"108"	"5314256.88146973"	"HCD"	"MS2"	"11.80412"	"129.0"	"100.000"	"58.6115"	"18391"	"18391"	"18373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.3"	""	"197.5"	""	"186.7"	""	"129.3"	""	"282.8"	"285.6"	""	"506"	"60"	"34.000"	"27.000"	"2.79331890835224E-05"	""	"0"	"1.937E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELALNTALFAK"	"[K].eLALNTALFAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"550.34058"	"1649.00718"	"1649.00381"	"2.04"	"0.00112"	"10/102"	"10"	"102"	"3392249.89758301"	"HCD"	"MS2"	"45.61662"	"95.0"	"100.000"	"64.9419"	"20971"	"20971"	"20947"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.0"	""	"130.5"	""	"150.3"	""	"148.3"	""	"181.2"	"180.8"	""	"506"	"35"	"34.000"	"27.000"	"0.00734717731579506"	"22"	"0.0001889"	"0.0004397"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVMALGSLAVTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"825.00726"	"1649.00725"	"1649.00718"	"0.04"	"0.00003"	"11/108"	"11"	"108"	"4780967.63525391"	"HCD"	"MS2"	"0"	"306.4"	"100.000"	"58.1718"	"18157"	"18157"	"18139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"392.6"	""	"468.1"	""	"440.3"	""	"297.2"	"2.9"	"682.7"	"626.7"	""	"516"	"96"	"34.000"	"27.000"	"6.37704829414163E-09"	""	"0"	"2.801E-06"	"1.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVMALGSLAVTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7529"	"0.0000"	"1"	"1"	"1"	"825.00732"	"1649.00737"	"1649.00718"	"0.11"	"0.00009"	"10/108"	"10"	"108"	"899345.172973633"	"HCD"	"MS2"	"0"	"68.1"	"100.000"	"58.4909"	"18288"	"18288"	"18266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.1"	""	"91.8"	""	"95.8"	""	"74.8"	"3.4"	"155.0"	"143.6"	""	"516"	"85"	"34.000"	"27.000"	"7.77355554240019E-08"	""	"0"	"1.791E-06"	"1.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELALNTALFAK"	"[K].eLALNTALFAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"550.34100"	"1649.00846"	"1649.00381"	"2.82"	"0.00155"	"10/102"	"10"	"102"	"3261177.91851807"	"HCD"	"MS2"	"42.68482"	"93.9"	"100.000"	"64.9663"	"20928"	"20928"	"20905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.1"	""	"134.7"	""	"147.2"	""	"143.5"	"0.2"	"170.5"	"169.1"	""	"507"	"32"	"34.000"	"27.000"	"0.0154873803313562"	"20"	"0.0001889"	"0.0004556"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVMALGSLAVTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"550.34113"	"1649.00882"	"1649.00718"	"0.99"	"0.00055"	"8/108"	"8"	"108"	"14279176.4252319"	"HCD"	"MS2"	"25.90177"	"345.3"	"100.000"	"58.3270"	"18275"	"18275"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"428.9"	"7.3"	"506.5"	""	"493.9"	""	"393.0"	""	"773.3"	"677.3"	""	"506"	"57"	"34.000"	"27.000"	"4.55114341527583E-05"	""	"0"	"1.99E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVMALGSLAVTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8280"	"0.0000"	"1"	"1"	"1"	"825.00848"	"1649.00969"	"1649.00718"	"1.52"	"0.00125"	"11/108"	"11"	"108"	"4636191.88677979"	"HCD"	"MS2"	"0"	"312.1"	"100.000"	"58.3293"	"18276"	"18276"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"415.6"	"2.9"	"450.0"	""	"453.4"	""	"314.8"	""	"714.9"	"613.7"	""	"505"	"93"	"34.000"	"27.000"	"1.15149321277702E-08"	""	"0"	"1.735E-06"	"1.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHINLIPNK"	"[K].eLHINLIPNk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"413.00903"	"1649.01430"	"1649.01505"	"-0.45"	"-0.00019"	"5/82"	"5"	"82"	"4498658.90704346"	"HCD"	"MS2"	"5.391471"	"127.3"	"100.000"	"47.1390"	"13725"	"13725"	"13698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.1"	""	"168.5"	""	"160.1"	""	"225.0"	""	"265.2"	"236.7"	""	"482"	"21"	"33.000"	"26.000"	"0.205597127478239"	"14"	"0.0001889"	"0.0006674"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHINLIPNK"	"[K].eLHINLIPNk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"413.00912"	"1649.01467"	"1649.01505"	"-0.23"	"-0.00009"	"8/82"	"8"	"82"	"4190756.10797119"	"HCD"	"MS2"	"3.744465"	"115.0"	"100.000"	"46.8430"	"13556"	"13556"	"13528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.0"	""	"131.9"	""	"152.0"	""	"198.0"	""	"242.3"	"233.4"	""	"483"	"22"	"33.000"	"26.000"	"0.138330241483078"	"14"	"0.0001889"	"0.0007009"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHINLIPNK"	"[K].eLHINLIPNk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"550.34460"	"1649.01926"	"1649.01505"	"2.55"	"0.00140"	"12/82"	"12"	"82"	"17162258.3597412"	"HCD"	"MS2"	"27.28794"	"329.7"	"100.000"	"46.7210"	"13506"	"13506"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"441.4"	""	"394.7"	""	"460.9"	""	"559.6"	"6.0"	"651.7"	"611.9"	""	"417"	"27"	"33.000"	"26.000"	"0.0403743979482867"	"23"	"7.476E-05"	"0.0001905"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHINLIPNK"	"[K].eLHINLIPNk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"550.34473"	"1649.01963"	"1649.01505"	"2.78"	"0.00153"	"11/82"	"11"	"82"	"17943928.3331299"	"HCD"	"MS2"	"20.99191"	"348.1"	"100.000"	"47.0124"	"13673"	"13673"	"13650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"442.0"	""	"429.3"	""	"460.2"	""	"623.2"	""	"707.9"	"640.8"	""	"417"	"27"	"33.000"	"26.000"	"0.0455099186619266"	"16"	"0.0001308"	"0.000284"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANVSLLALYK"	"[K].vANVSLLALYk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"825.02075"	"1649.03423"	"1649.04020"	"-3.62"	"-0.00299"	"18/96"	"18"	"96"	"1731161.73950195"	"HCD"	"MS2"	"0"	"128.8"	"100.000"	"67.6235"	"22006"	"22006"	"21985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.9"	""	"223.5"	""	"244.5"	""	"204.1"	"2.5"	"177.2"	"177.9"	""	"329"	"66"	"32.000"	"25.000"	"4.4377813663719E-06"	"21"	"0"	"1.241E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANVSLLALYK"	"[K].vANVSLLALYk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.02148"	"1649.03569"	"1649.04020"	"-2.73"	"-0.00225"	"17/96"	"17"	"96"	"2004757.11425781"	"HCD"	"MS2"	"20.37659"	"147.0"	"100.000"	"67.5224"	"22015"	"22015"	"21994"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"215.4"	""	"252.2"	""	"271.3"	""	"228.1"	""	"215.7"	"206.8"	""	"328"	"41"	"32.000"	"25.000"	"0.00142181747624348"	"15"	"0"	"2.368E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANVSLLALYK"	"[K].vANVSLLALYk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"550.35059"	"1649.03720"	"1649.04020"	"-1.82"	"-0.00100"	"14/96"	"14"	"96"	"3776918.79711914"	"HCD"	"MS2"	"28.47074"	"96.9"	"100.000"	"67.4894"	"22002"	"22002"	"21978"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.1"	""	"163.6"	""	"185.3"	""	"148.7"	"0.9"	"136.2"	"125.0"	""	"307"	"35"	"31.000"	"24.000"	"0.00493296892681289"	"17"	"0"	"5.555E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANVSLLALYK"	"[K].vANVSLLALYk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.02350"	"1649.03972"	"1649.04020"	"-0.29"	"-0.00024"	"9/96"	"9"	"96"	"365481.703491211"	"HCD"	"MS2"	"0"	"32.2"	"100.000"	"67.9291"	"22130"	"22130"	"22106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.5"	""	"50.0"	""	"55.4"	""	"45.6"	"0.4"	"50.2"	"58.4"	""	"297"	"52"	"31.000"	"24.000"	"9.63222133819133E-05"	"16"	"0"	"1.281E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANVSLLALYK"	"[K].vANVSLLALYk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"550.35156"	"1649.04013"	"1649.04020"	"-0.04"	"-0.00002"	"14/96"	"14"	"96"	"4242072.71252441"	"HCD"	"MS2"	"24.00035"	"107.1"	"100.000"	"67.6304"	"22009"	"22009"	"21985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.0"	""	"182.5"	""	"193.7"	""	"175.0"	""	"147.6"	"148.1"	""	"284"	"36"	"31.000"	"24.000"	"0.00366680947070112"	"18"	"0"	"5.761E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KESPLLFK"	"[R].kESPLLFk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"413.02026"	"1649.05922"	"1649.06049"	"-0.77"	"-0.00032"	"5/72"	"5"	"72"	"3486285.12713623"	"HCD"	"MS2"	"22.59462"	"155.0"	"100.000"	"40.9512"	"11208"	"11208"	"11181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.8"	""	"194.8"	""	"222.7"	""	"258.4"	"0.5"	"286.2"	"312.5"	""	"177"	"12"	"29.000"	"22.000"	"0.559684488467955"	"13"	"0.0001889"	"0.0007572"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KESPLLFK"	"[R].kESPLLFk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"550.35828"	"1649.06028"	"1649.06049"	"-0.13"	"-0.00007"	"5/72"	"5"	"72"	"39840559.4239502"	"HCD"	"MS2"	"19.58158"	"1279.1"	"65.167"	"40.8227"	"11155"	"11155"	"11133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1689.0"	""	"1679.4"	""	"1642.1"	""	"2089.7"	""	"2574.8"	"2485.0"	""	"160"	"12"	"29.000"	"22.000"	"0.500138154220549"	"16"	"0.000523"	"0.002907"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KESPLLFK"	"[R].kESPLLFk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"550.35834"	"1649.06046"	"1649.06049"	"-0.02"	"-0.00001"	"10/72"	"10"	"72"	"77827619.8251953"	"HCD"	"MS2"	"14.37157"	"1174.0"	"31.493"	"40.6624"	"11046"	"11046"	"11029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1565.3"	""	"1537.8"	""	"1501.6"	""	"1937.8"	""	"2288.8"	"2306.5"	""	"154"	"21"	"28.000"	"21.000"	"0.0576090515393589"	"18"	"0.000523"	"0.003003"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KESPLLFK"	"[R].kESPLLFk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"550.35858"	"1649.06119"	"1649.06049"	"0.43"	"0.00023"	"5/72"	"5"	"72"	"14568179.7188721"	"HCD"	"MS2"	"11.95219"	"416.2"	"57.612"	"41.1278"	"11280"	"11280"	"11261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"532.1"	""	"544.4"	""	"527.2"	""	"654.6"	"0.1"	"834.0"	"857.6"	""	"154"	"27"	"28.000"	"21.000"	"0.015685223998334"	""	"0.0002723"	"0.001382"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KESPLLFK"	"[R].kESPLLFk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"550.35870"	"1649.06156"	"1649.06049"	"0.65"	"0.00036"	"5/72"	"5"	"72"	"9233135.19311523"	"HCD"	"MS2"	"13.31325"	"466.0"	"100.000"	"40.9838"	"11177"	"11177"	"11157"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"601.1"	""	"609.1"	""	"587.3"	""	"761.6"	"10.1"	"921.2"	"931.2"	""	"152"	"27"	"28.000"	"21.000"	"0.016550594269884"	""	"0.0001889"	"0.001016"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KESPLLFK"	"[R].kESPLLFk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"825.03485"	"1649.06243"	"1649.06049"	"1.17"	"0.00097"	"12/72"	"12"	"72"	"783284.28717041"	"HCD"	"MS2"	"20.2012"	"74.5"	"100.000"	"40.9535"	"11209"	"11209"	"11181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.1"	""	"89.6"	""	"92.3"	""	"125.9"	"1.8"	"144.2"	"139.4"	""	"152"	"27"	"28.000"	"21.000"	"0.015094321371916"	"19"	"0.001422"	"0.01953"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HMYHSLYLK"	"[R].hMYHSLYLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"413.23599"	"1649.92214"	"1649.92379"	"-1.00"	"-0.00041"	"8/64"	"8"	"64"	"10339911.9423828"	"HCD"	"MS2"	"13.48747"	"342.5"	"100.000"	"32.3163"	"7680"	"7680"	"7657"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"512.0"	""	"548.6"	""	"557.6"	""	"422.5"	"6.8"	"602.1"	"591.4"	""	"1051"	"18"	"37.000"	"30.000"	"0.854225871146879"	"14"	"0.0001889"	"0.0006251"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HMYHSLYLK"	"[R].hMYHSLYLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"413.23615"	"1649.92275"	"1649.92379"	"-0.63"	"-0.00026"	"8/64"	"8"	"64"	"9401471.71887207"	"HCD"	"MS2"	"10.05039"	"302.2"	"100.000"	"32.1844"	"7583"	"7583"	"7565"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"465.0"	""	"482.9"	""	"506.7"	""	"363.9"	"4.2"	"512.7"	"523.0"	""	"1045"	"19"	"37.000"	"30.000"	"0.721250778255007"	"14"	"0.0001308"	"0.0002675"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALELYNK"	"[K].vLEALELYNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"550.65942"	"1649.96372"	"1649.98783"	"-14.61"	"-0.00804"	"11/80"	"11"	"80"	"2545738.5770874"	"HCD"	"MS2"	"28.38547"	"62.9"	"100.000"	"68.6048"	"22406"	"22406"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.2"	""	"78.2"	""	"95.6"	""	"102.7"	"0.5"	"116.6"	"120.5"	""	"842"	"10"	"36.000"	"29.000"	"3.97449628916373"	"18"	"0.0007076"	"0.006924"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALELYNK"	"[K].vLEALELYNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"550.65948"	"1649.96390"	"1649.98783"	"-14.50"	"-0.00798"	"7/80"	"7"	"80"	"3629186.36853027"	"HCD"	"MS2"	"10.45773"	"94.8"	"100.000"	"68.1931"	"22289"	"22289"	"22266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.6"	""	"126.8"	""	"134.4"	""	"151.8"	""	"184.1"	"174.8"	""	"842"	"5"	"36.000"	"29.000"	"13.8446536598789"	"16"	"0.001217"	"0.01786"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALELYNK"	"[K].vLEALELYNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"825.48566"	"1649.96404"	"1649.98783"	"-14.42"	"-0.01190"	"7/80"	"7"	"80"	"1881662.85388184"	"HCD"	"MS2"	"6.096338"	"139.5"	"100.000"	"68.2322"	"22305"	"22305"	"22282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.3"	""	"186.4"	""	"198.9"	""	"228.6"	""	"249.0"	"249.7"	""	"841"	"11"	"36.000"	"29.000"	"3.59555552768009"	"20"	"0.0005564"	"0.003545"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALELYNK"	"[K].vLEALELYNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"825.48633"	"1649.96538"	"1649.98783"	"-13.61"	"-0.01122"	"8/80"	"8"	"80"	"1834585.09954834"	"HCD"	"MS2"	"9.711178"	"144.1"	"100.000"	"68.3650"	"22308"	"22308"	"22282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.4"	""	"191.5"	""	"202.5"	""	"247.9"	"1.2"	"245.4"	"256.7"	""	"824"	"20"	"36.000"	"29.000"	"0.381853887232292"	"24"	"0.0001308"	"0.0003105"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEALELYNK"	"[K].vLEALELYNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"550.66003"	"1649.96555"	"1649.98783"	"-13.50"	"-0.00743"	"11/80"	"11"	"80"	"3121462.90301514"	"HCD"	"MS2"	"23.47136"	"79.6"	"100.000"	"68.2958"	"22280"	"22280"	"22250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.6"	""	"99.1"	""	"105.6"	""	"138.8"	"1.9"	"152.2"	"143.3"	""	"811"	"11"	"36.000"	"29.000"	"3.53989889881379"	"18"	"0.0006737"	"0.006468"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"550.66107"	"1649.96866"	"1649.97007"	"-0.85"	"-0.00047"	"8/86"	"8"	"86"	"5553658.41998291"	"HCD"	"MS2"	"7.295864"	"129.9"	"100.000"	"73.0191"	"24259"	"24259"	"24239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.6"	""	"240.6"	""	"145.5"	""	"153.0"	""	"263.0"	"235.1"	""	"839"	"52"	"36.000"	"29.000"	"0.000270229006883617"	"21"	"0"	"6.478E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"550.66144"	"1649.96976"	"1649.97007"	"-0.19"	"-0.00010"	"8/86"	"8"	"86"	"7910017.90600586"	"HCD"	"MS2"	"12.84083"	"178.2"	"100.000"	"73.3232"	"24384"	"24384"	"24367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"300.2"	""	"285.2"	""	"194.9"	""	"211.8"	""	"351.8"	"346.2"	""	"821"	"40"	"36.000"	"29.000"	"0.00413345450063665"	"18"	"0"	"0.0001513"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"550.66144"	"1649.96976"	"1649.97007"	"-0.19"	"-0.00010"	"8/86"	"8"	"86"	"9283085.66503906"	"HCD"	"MS2"	"7.023959"	"215.0"	"100.000"	"73.1060"	"24243"	"24243"	"24225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.2"	""	"369.0"	""	"253.9"	""	"255.4"	"1.3"	"412.5"	"396.6"	""	"821"	"52"	"36.000"	"29.000"	"0.00026443148349398"	"21"	"0"	"6.233E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"825.48865"	"1649.97002"	"1649.97007"	"-0.03"	"-0.00003"	"10/86"	"10"	"86"	"1496133.28863525"	"HCD"	"MS2"	"6.511713"	"106.5"	"100.000"	"72.9888"	"24247"	"24247"	"24223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.2"	""	"184.5"	""	"125.0"	""	"131.9"	"1.2"	"201.1"	"195.1"	""	"819"	"61"	"36.000"	"29.000"	"3.33621404306534E-05"	"23"	"0"	"2.172E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"550.66187"	"1649.97104"	"1649.97007"	"0.59"	"0.00032"	"13/86"	"13"	"86"	"3871710.31744385"	"HCD"	"MS2"	"16.06369"	"99.8"	"100.000"	"73.4220"	"24372"	"24372"	"24353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.0"	""	"146.0"	""	"121.7"	""	"123.9"	"1.7"	"207.0"	"198.6"	""	"804"	"34"	"36.000"	"29.000"	"0.0159671002886715"	"17"	"0"	"8.061E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"825.48920"	"1649.97112"	"1649.97007"	"0.63"	"0.00052"	"9/86"	"9"	"86"	"1573287.62506104"	"HCD"	"MS2"	"8.912367"	"116.9"	"100.000"	"73.0346"	"24214"	"24214"	"24193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.6"	""	"202.0"	""	"141.1"	""	"137.9"	"2.7"	"221.4"	"208.7"	""	"835"	"63"	"36.000"	"29.000"	"2.00750427977762E-05"	"24"	"0"	"1.146E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"825.48920"	"1649.97112"	"1649.97007"	"0.63"	"0.00052"	"9/86"	"9"	"86"	"4174211.5111084"	"HCD"	"MS2"	"0"	"281.8"	"100.000"	"73.2840"	"24368"	"24368"	"24351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"457.8"	""	"483.3"	""	"327.7"	""	"308.1"	""	"541.3"	"554.2"	""	"835"	"60"	"36.000"	"29.000"	"4.4839057965247E-05"	"22"	"0"	"1.132E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8923"	"0.0000"	"1"	"1"	"1"	"825.48932"	"1649.97136"	"1649.97007"	"0.78"	"0.00065"	"9/86"	"9"	"86"	"3413494.24407959"	"HCD"	"MS2"	"0"	"243.0"	"100.000"	"73.3369"	"24338"	"24338"	"24321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.9"	""	"409.3"	""	"285.9"	""	"283.3"	"0.6"	"477.9"	"473.0"	""	"833"	"65"	"36.000"	"29.000"	"1.25491700907352E-05"	"24"	"0"	"1.277E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDPSKPGK"	"[K].sFDPSkPGk.[I]"	"N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.66595"	"1649.98331"	"1649.98297"	"0.21"	"0.00011"	"7/78"	"7"	"78"	"13324608.3896484"	"HCD"	"MS2"	"13.24053"	"828.4"	"100.000"	"32.6220"	"7805"	"7805"	"7782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1333.3"	""	"1275.8"	""	"1296.5"	""	"1327.4"	"6.7"	"1330.9"	"1257.7"	""	"722"	"14"	"35.000"	"28.000"	"1.31071177772007"	"13"	"0"	"0.0001439"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDPSKPGK"	"[K].sFDPSkPGk.[I]"	"N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.66602"	"1649.98349"	"1649.98297"	"0.32"	"0.00018"	"8/78"	"8"	"78"	"10147144.7620239"	"HCD"	"MS2"	"29.48524"	"651.7"	"100.000"	"32.4992"	"7712"	"7712"	"7688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1076.7"	""	"1035.7"	""	"1019.1"	""	"1043.4"	""	"1023.7"	"958.0"	""	"723"	"8"	"35.000"	"28.000"	"5.876358752038"	"13"	"0.0001889"	"0.0004602"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFTAESLIGLK"	"[K].lFTAESLIGLk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"550.67841"	"1650.02066"	"1650.02422"	"-2.15"	"-0.00118"	"8/86"	"8"	"86"	"2650514.22113037"	"HCD"	"MS2"	"45.47196"	"73.2"	"100.000"	"76.5700"	"25702"	"25702"	"25692"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.6"	""	"102.1"	""	"118.7"	""	"116.2"	""	"132.7"	"128.9"	""	"412"	"52"	"33.000"	"26.000"	"0.000122424184674808"	""	"0"	"0.0001457"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFTAESLIGLK"	"[K].lFTAESLIGLk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"3"	"3"	"0.9104"	"0.0000"	"1"	"1"	"1"	"550.67889"	"1650.02213"	"1650.02422"	"-1.26"	"-0.00070"	"9/86"	"9"	"86"	"2716039.69476318"	"HCD"	"MS2"	"27.67898"	"74.1"	"100.000"	"76.6380"	"25678"	"25678"	"25667"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.3"	""	"107.6"	""	"115.9"	""	"118.5"	""	"132.4"	"132.5"	""	"385"	"67"	"32.000"	"25.000"	"3.46282651162291E-06"	"23"	"0"	"2.907E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPYAGTAEAVK"	"[K].wPYAGTAEAVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"825.96625"	"1650.92522"	"1650.92556"	"-0.21"	"-0.00017"	"10/84"	"10"	"84"	"1344796.51727295"	"HCD"	"MS2"	"0"	"95.2"	"100.000"	"46.8309"	"13599"	"13599"	"13570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.6"	""	"110.1"	""	"109.8"	""	"159.1"	"1.0"	"189.4"	"215.1"	""	"979"	"66"	"36.000"	"29.000"	"1.2239190545504E-05"	"23"	"0"	"7.026E-06"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPYAGTAEAVK"	"[K].wPYAGTAEAVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"825.96631"	"1650.92534"	"1650.92556"	"-0.14"	"-0.00011"	"10/84"	"10"	"84"	"993724.744812012"	"HCD"	"MS2"	"100"	"81.4"	"100.000"	"46.5299"	"13428"	"13428"	"13400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.8"	""	"97.7"	""	"102.7"	""	"140.5"	""	"177.3"	"170.3"	""	"979"	"50"	"36.000"	"29.000"	"0.000452639756142759"	"21"	"0.0001308"	"0.0002421"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WPYAGTAEAVK"	"[K].wPYAGTAEAVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"550.98053"	"1650.92704"	"1650.92556"	"0.89"	"0.00049"	"12/84"	"12"	"84"	"7522641.8147583"	"HCD"	"MS2"	"37.00411"	"199.7"	"100.000"	"46.6795"	"13489"	"13489"	"13464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.0"	""	"263.4"	""	"261.7"	""	"342.0"	"4.1"	"389.2"	"400.9"	""	"961"	"23"	"36.000"	"29.000"	"0.246997974585356"	"20"	"0.0001889"	"0.0003997"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPLPGPLFDSLPR"	"[R].iPLPGPLFDSLPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62784"	"Type I inositol 3,4-bisphosphate 4-phosphatase OS=Rattus norvegicus OX=10116 GN=Inpp4a PE=1 SV=1"	"Q62784"	"Type I inositol 3,4-bisphosphate 4-phosphatase OS=Rattus norvegicus OX=10116 GN=Inpp4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.99292"	"1650.97856"	"1650.97804"	"0.31"	"0.00026"	"11/98"	"11"	"98"	"637080.93347168"	"HCD"	"MS2"	"15.08723"	"18.9"	"100.000"	"80.3848"	"27253"	"27253"	"27231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.9"	""	"24.8"	""	"24.9"	""	"34.0"	""	"38.3"	"35.5"	""	"722"	"38"	"35.000"	"28.000"	"0.00620164927763889"	"15"	"0"	"0.0001117"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPLPGPLFDSLPR"	"[R].iPLPGPLFDSLPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62784"	"Type I inositol 3,4-bisphosphate 4-phosphatase OS=Rattus norvegicus OX=10116 GN=Inpp4a PE=1 SV=1"	"Q62784"	"Type I inositol 3,4-bisphosphate 4-phosphatase OS=Rattus norvegicus OX=10116 GN=Inpp4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.99365"	"1650.98003"	"1650.97804"	"1.20"	"0.00099"	"7/98"	"7"	"98"	"747758.751586914"	"HCD"	"MS2"	"45.54039"	"22.8"	"100.000"	"80.3508"	"27188"	"27188"	"27169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.6"	""	"31.7"	""	"28.2"	""	"37.6"	""	"51.6"	"43.6"	""	"700"	"18"	"35.000"	"28.000"	"0.61669161624407"	"14"	"0.00103"	"0.01297"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPITTGGVTYR"	"[K].kPITTGGVTYR.[D]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35115"	"Four and a half LIM domains protein 2 OS=Rattus norvegicus OX=10116 GN=Fhl2 PE=1 SV=1"	"O35115"	"Four and a half LIM domains protein 2 OS=Rattus norvegicus OX=10116 GN=Fhl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.00250"	"1650.99295"	"1650.99431"	"-0.82"	"-0.00045"	"13/110"	"13"	"110"	"3641506.99060059"	"HCD"	"MS2"	"24.28642"	"185.6"	"100.000"	"30.8646"	"7046"	"7046"	"7016"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.5"	""	"282.7"	""	"266.5"	""	"241.3"	"0.9"	"352.8"	"323.4"	""	"586"	"9"	"34.000"	"27.000"	"3.99822859020555"	"13"	"0"	"0.0001443"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGEIFELK"	"[K].kGEIFELk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.01758"	"1651.03818"	"1651.03975"	"-0.95"	"-0.00052"	"9/76"	"9"	"76"	"18758969.6127319"	"HCD"	"MS2"	"14.37676"	"991.4"	"93.710"	"42.0079"	"11594"	"11594"	"11586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1464.9"	""	"1223.7"	""	"1262.5"	""	"1616.9"	""	"1928.9"	"1907.4"	""	"238"	"19"	"30.000"	"23.000"	"0.16388792679838"	"14"	"0.0003839"	"0.001692"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGEIFELK"	"[K].kGEIFELk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.01770"	"1651.03855"	"1651.03975"	"-0.73"	"-0.00040"	"9/76"	"9"	"76"	"17919682.2750244"	"HCD"	"MS2"	"15.11073"	"728.8"	"68.624"	"42.2419"	"11734"	"11734"	"11721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1080.9"	""	"901.8"	""	"892.5"	""	"1237.0"	""	"1397.6"	"1401.0"	""	"221"	"17"	"30.000"	"23.000"	"0.200153080234466"	"14"	"0.0003146"	"0.001445"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPGSTFMDHVLR"	"[R].yPGSTFMDHVLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.9365"	"0.0000"	"1"	"1"	"1"	"551.28662"	"1651.84531"	"1651.84638"	"-0.65"	"-0.00036"	"10/96"	"10"	"96"	"13113454.5692139"	"HCD"	"MS2"	"35.18312"	"292.6"	"93.793"	"47.4015"	"13832"	"13832"	"13810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.5"	""	"403.1"	""	"421.8"	""	"431.5"	"5.8"	"549.5"	"547.4"	""	"930"	"63"	"36.000"	"29.000"	"2.60887308855099E-05"	"20"	"0"	"9.207E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPGSTFMDHVLR"	"[R].yPGSTFMDHVLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"551.28705"	"1651.84659"	"1651.84638"	"0.13"	"0.00007"	"10/96"	"10"	"96"	"12454376.5751343"	"HCD"	"MS2"	"34.80233"	"301.8"	"84.551"	"47.1402"	"13677"	"13677"	"13656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"403.3"	""	"426.8"	""	"442.5"	""	"452.7"	"3.1"	"529.8"	"601.7"	""	"928"	"54"	"36.000"	"29.000"	"0.000202077509390104"	"18"	"0"	"6.155E-06"	"1.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEMLPEFYK"	"[R].hEMLPEFYk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.30121"	"1651.88907"	"1651.89182"	"-1.66"	"-0.00092"	"9/72"	"9"	"72"	"3106042.54919434"	"HCD"	"MS2"	"0"	"164.6"	"100.000"	"41.8385"	"11527"	"11527"	"11505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.3"	""	"226.1"	""	"223.3"	""	"245.5"	"3.6"	"300.4"	"338.2"	""	"1053"	"7"	"37.000"	"30.000"	"10.6022581755255"	"13"	"0.0006037"	"0.004423"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEMLPEFYK"	"[R].hEMLPEFYk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"551.30151"	"1651.88999"	"1651.89182"	"-1.11"	"-0.00061"	"10/72"	"10"	"72"	"5509292.59631348"	"HCD"	"MS2"	"41.13848"	"221.4"	"100.000"	"42.0129"	"11643"	"11643"	"11618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"339.6"	""	"311.8"	""	"333.8"	""	"279.3"	"3.6"	"399.5"	"428.8"	""	"1056"	"27"	"37.000"	"30.000"	"0.0945439890930636"	"24"	"0"	"0.0001434"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIALNEDLK"	"[R].dYIALNEDLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"826.46912"	"1651.93096"	"1651.93071"	"0.15"	"0.00012"	"8/94"	"8"	"94"	"580655.492614746"	"HCD"	"MS2"	"18.22583"	"43.9"	"100.000"	"51.1522"	"15309"	"15309"	"15282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.5"	""	"68.8"	""	"53.5"	""	"67.4"	""	"79.1"	"88.2"	""	"955"	"33"	"36.000"	"29.000"	"0.0256432682766796"	"19"	"0.0001889"	"0.0009883"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHKYH"	"[K].vVAGVASALAHKYH.[-]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.8364"	"0.0000"	"1"	"1"	"1"	"413.74197"	"1651.94607"	"1651.94814"	"-1.26"	"-0.00052"	"14/104"	"14"	"104"	"21717187.7709961"	"HCD"	"MS2"	"9.681387"	"151.8"	"89.851"	"38.3754"	"10154"	"10154"	"10129"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.1"	""	"168.6"	""	"180.0"	""	"299.7"	"1.7"	"303.3"	"319.4"	""	"869"	"55"	"36.000"	"29.000"	"0.000145542483314076"	"25"	"0"	"0.000139"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHKYH"	"[K].vVAGVASALAHKYH.[-]"	"N-Term(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.8113"	"0.0000"	"1"	"1"	"1"	"413.74228"	"1651.94729"	"1651.94814"	"-0.52"	"-0.00021"	"9/104"	"9"	"104"	"11389048.7867432"	"HCD"	"MS2"	"6.294678"	"91.0"	"87.658"	"38.3351"	"10094"	"10094"	"10071"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.2"	"2.4"	"107.6"	""	"114.1"	""	"173.2"	"4.4"	"171.4"	"176.2"	""	"859"	"53"	"36.000"	"29.000"	"0.000194519510568605"	"25"	"0"	"8.432E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTYLVMNK"	"[R].yYTYLVMNk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"551.64203"	"1652.91153"	"1652.91222"	"-0.42"	"-0.00023"	"10/66"	"10"	"66"	"11485960.4008179"	"HCD"	"MS2"	"20.27656"	"318.1"	"100.000"	"56.9398"	"17654"	"17654"	"17627"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"625.6"	""	"613.4"	""	"419.6"	""	"402.8"	"0.5"	"442.9"	"496.4"	""	"1011"	"30"	"37.000"	"30.000"	"0.0520860183883237"	"25"	"0.0001889"	"0.0005443"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTYLVMNK"	"[R].yYTYLVMNk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"551.64209"	"1652.91172"	"1652.91222"	"-0.31"	"-0.00017"	"10/66"	"10"	"66"	"7260559.16217041"	"HCD"	"MS2"	"28.06343"	"217.3"	"100.000"	"57.2276"	"17772"	"17772"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"319.6"	""	"320.2"	""	"280.5"	""	"342.1"	""	"377.5"	"418.2"	""	"1012"	"18"	"37.000"	"30.000"	"0.839750975163405"	"20"	"0.0001889"	"0.0006164"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTYLVMNK"	"[R].yYTYLVMNk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"826.95978"	"1652.91228"	"1652.91222"	"0.03"	"0.00003"	"14/66"	"14"	"66"	"4257818.37451172"	"HCD"	"MS2"	"13.62338"	"360.2"	"100.000"	"57.1501"	"17794"	"17794"	"17765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"703.2"	""	"669.9"	""	"490.8"	""	"451.6"	"0.6"	"526.9"	"556.6"	""	"992"	"40"	"36.000"	"29.000"	"0.0054385318528702"	"22"	"0.0001308"	"0.0002306"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTYLVMNK"	"[R].yYTYLVMNk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6452"	"0.0000"	"1"	"1"	"1"	"551.64233"	"1652.91245"	"1652.91222"	"0.14"	"0.00008"	"10/66"	"10"	"66"	"11752580.5142822"	"HCD"	"MS2"	"17.26282"	"319.3"	"100.000"	"57.1386"	"17789"	"17789"	"17765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"643.7"	""	"615.7"	""	"422.1"	""	"395.8"	"2.3"	"451.9"	"481.0"	""	"992"	"31"	"36.000"	"29.000"	"0.0389476874766596"	"25"	"0.0001889"	"0.0005206"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTYLVMNK"	"[R].yYTYLVMNk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"826.96021"	"1652.91313"	"1652.91222"	"0.55"	"0.00046"	"8/66"	"8"	"66"	"4424838.30969238"	"HCD"	"MS2"	"18.90552"	"377.4"	"100.000"	"56.9604"	"17662"	"17662"	"17643"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"729.8"	""	"716.4"	""	"493.7"	""	"509.8"	"1.1"	"535.1"	"575.0"	""	"984"	"44"	"36.000"	"29.000"	"0.00175778236370749"	"23"	"0.0001308"	"0.0002376"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDATSASMLASK"	"[K].iDATSASMLASk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"826.96838"	"1652.92949"	"1652.92933"	"0.10"	"0.00008"	"11/106"	"11"	"106"	"1283031.4241333"	"HCD"	"MS2"	"0"	"113.4"	"100.000"	"46.9489"	"13599"	"13599"	"13576"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.3"	""	"143.1"	""	"165.6"	""	"121.9"	"0.5"	"219.4"	"235.5"	""	"904"	"78"	"36.000"	"29.000"	"7.83679406984871E-07"	"23"	"0"	"5.971E-07"	"1.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPDHFHLLR"	"[K].lLYPDHFHLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"413.99176"	"1652.94521"	"1652.94741"	"-1.33"	"-0.00055"	"10/80"	"10"	"80"	"6894191.90118408"	"HCD"	"MS2"	"3.482387"	"42.0"	"100.000"	"47.7191"	"13962"	"13962"	"13938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.3"	""	"55.5"	""	"75.0"	""	"72.1"	"0.7"	"74.2"	"74.5"	""	"816"	"26"	"36.000"	"29.000"	"0.107068116570085"	"14"	"0.0003839"	"0.001569"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDKK"	"[R].nISFNDkk.[F]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.66901"	"1652.99247"	"1652.99387"	"-0.85"	"-0.00047"	"10/76"	"10"	"76"	"25164433.7348022"	"HCD"	"MS2"	"11.44164"	"1839.0"	"100.000"	"34.1228"	"8410"	"8410"	"8401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4118.2"	""	"2976.2"	""	"2633.2"	""	"2649.7"	""	"2270.6"	"2693.7"	""	"519"	"9"	"34.000"	"27.000"	"3.15600267167732"	"13"	"0.0007076"	"0.007101"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDKK"	"[R].nISFNDkk.[F]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"826.99994"	"1652.99260"	"1652.99387"	"-0.77"	"-0.00063"	"11/76"	"11"	"76"	"519238.157714844"	"HCD"	"MS2"	"0"	"53.8"	"100.000"	"34.2214"	"8450"	"8450"	"8428"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.6"	""	"80.8"	""	"84.2"	""	"75.3"	"1.0"	"68.9"	"85.9"	""	"518"	"22"	"34.000"	"27.000"	"0.146994052800814"	"18"	"0.0006396"	"0.006252"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDKK"	"[R].nISFNDkk.[F]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.66907"	"1652.99265"	"1652.99387"	"-0.74"	"-0.00041"	"9/76"	"9"	"76"	"6740202.84552002"	"HCD"	"MS2"	"6.428742"	"510.0"	"100.000"	"34.4187"	"8530"	"8530"	"8508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1025.8"	""	"750.4"	""	"753.2"	""	"730.9"	""	"728.7"	"827.0"	""	"518"	"7"	"34.000"	"27.000"	"5.47393661317692"	"13"	"0.0006037"	"0.004288"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDKK"	"[R].nISFNDkk.[F]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.66913"	"1652.99283"	"1652.99387"	"-0.63"	"-0.00035"	"8/76"	"8"	"76"	"15438669.0384521"	"HCD"	"MS2"	"0"	"1134.9"	"100.000"	"34.0655"	"8343"	"8343"	"8332"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2586.8"	""	"1779.5"	""	"1654.2"	""	"1662.8"	"4.9"	"1408.9"	"1591.7"	""	"514"	"8"	"34.000"	"27.000"	"3.88985240848106"	"13"	"0.0004166"	"0.002475"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDKK"	"[R].nISFNDkk.[F]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.66925"	"1652.99320"	"1652.99387"	"-0.40"	"-0.00022"	"11/76"	"11"	"76"	"6093472.73327637"	"HCD"	"MS2"	"11.33103"	"467.5"	"100.000"	"34.3937"	"8477"	"8477"	"8451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"904.1"	""	"671.5"	""	"664.4"	""	"708.3"	"0.4"	"687.3"	"778.1"	""	"529"	"2"	"34.000"	"27.000"	"15.2203863425678"	"13"	"0.0004166"	"0.002218"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDKK"	"[R].nISFNDkk.[F]"	"N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"827.00079"	"1652.99431"	"1652.99387"	"0.27"	"0.00022"	"7/76"	"7"	"76"	"546276.657714844"	"HCD"	"MS2"	"0"	"56.5"	"100.000"	"34.1709"	"8386"	"8386"	"8361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.3"	""	"75.9"	""	"86.3"	""	"86.2"	""	"75.6"	"85.4"	""	"515"	"36"	"34.000"	"27.000"	"0.00717426200922166"	"18"	"0.0001889"	"0.0007703"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALPTLLNPK"	"[R].dLALPTLLNPk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"3"	"3"	"0.9672"	"0.0000"	"1"	"1"	"1"	"551.68292"	"1653.03421"	"1653.03511"	"-0.54"	"-0.00030"	"8/94"	"8"	"94"	"4293291.78918457"	"HCD"	"MS2"	"7.590297"	"93.0"	"100.000"	"67.7964"	"22127"	"22127"	"22106"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.3"	""	"107.6"	""	"130.1"	""	"163.8"	"0.3"	"180.0"	"179.8"	""	"239"	"61"	"30.000"	"23.000"	"1.02416022505029E-05"	"18"	"0"	"9.652E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALPTLLNPK"	"[R].dLALPTLLNPk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"3"	"3"	"0.9831"	"0.0000"	"1"	"1"	"1"	"551.68317"	"1653.03495"	"1653.03511"	"-0.10"	"-0.00006"	"8/94"	"8"	"94"	"3579193.18481445"	"HCD"	"MS2"	"18.02879"	"80.4"	"100.000"	"67.8831"	"22111"	"22111"	"22090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.5"	""	"111.4"	""	"102.7"	""	"146.7"	""	"153.8"	"155.2"	""	"237"	"59"	"30.000"	"23.000"	"1.61703101685788E-05"	"17"	"0"	"2.501E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALPTLLNPK"	"[R].dLALPTLLNPk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.68347"	"1653.03586"	"1653.03511"	"0.45"	"0.00025"	"9/94"	"9"	"94"	"956325.426879883"	"HCD"	"MS2"	"12.30482"	"33.7"	"100.000"	"68.2174"	"22248"	"22248"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.3"	""	"43.7"	""	"42.1"	""	"61.4"	""	"67.0"	"69.2"	""	"236"	"16"	"30.000"	"23.000"	"0.30611316473002"	"13"	"0.0001889"	"0.0004615"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFHENEIWFR"	"[K].fFHENEIWFR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"551.95038"	"1653.83658"	"1653.83753"	"-0.57"	"-0.00032"	"6/86"	"6"	"86"	"4347024.26879883"	"HCD"	"MS2"	"36.049"	"89.5"	"100.000"	"55.9729"	"17313"	"17313"	"17285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.3"	""	"113.4"	""	"131.0"	""	"149.3"	"0.3"	"190.5"	"173.6"	""	"882"	"45"	"36.000"	"29.000"	"0.00136282028573849"	"25"	"0"	"7.338E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYNEVVSLMK"	"[R].lYNEVVSLMk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"551.99194"	"1653.96128"	"1653.96499"	"-2.24"	"-0.00124"	"12/92"	"12"	"92"	"1689194.94116211"	"HCD"	"MS2"	"0"	"49.9"	"100.000"	"71.6994"	"23721"	"23721"	"23690"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.5"	""	"67.3"	""	"79.5"	""	"64.6"	""	"92.2"	"99.0"	""	"773"	"21"	"35.000"	"28.000"	"0.337403433882005"	"17"	"0.0001889"	"0.000418"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYNEVVSLMK"	"[R].lYNEVVSLMk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"551.99274"	"1653.96366"	"1653.96499"	"-0.80"	"-0.00044"	"7/92"	"7"	"92"	"1629396.67730713"	"HCD"	"MS2"	"0"	"51.3"	"100.000"	"71.7862"	"23704"	"23704"	"23683"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.9"	""	"76.2"	""	"81.3"	""	"69.7"	""	"88.6"	"99.7"	""	"770"	"25"	"35.000"	"28.000"	"0.130455000113593"	""	"0.0001889"	"0.001027"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NRPPLAAGANSK"	"[R].nRPPLAAGANSk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.99799"	"1653.97940"	"1653.98006"	"-0.40"	"-0.00022"	"5/110"	"5"	"110"	"2394129.61560059"	"HCD"	"MS2"	"23.71917"	"134.6"	"100.000"	"25.7316"	"4997"	"4997"	"4971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.3"	""	"156.6"	""	"164.8"	""	"261.0"	""	"249.1"	"268.0"	""	"630"	"3"	"34.000"	"27.000"	"15.1464394761664"	"13"	"0.0002723"	"0.001364"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPIQLSIFSHR"	"[R].lDPIQLSIFSHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.32135"	"1654.94950"	"1654.94781"	"1.02"	"0.00056"	"12/118"	"12"	"118"	"2362181.52923584"	"HCD"	"MS2"	"0"	"62.8"	"100.000"	"60.8829"	"19314"	"19314"	"19283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.2"	""	"51.9"	""	"60.2"	""	"128.0"	""	"157.2"	"153.8"	""	"808"	"28"	"36.000"	"29.000"	"0.0641772886433503"	"14"	"0"	"0.0001554"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPIQLSIFSHR"	"[R].lDPIQLSIFSHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.32135"	"1654.94950"	"1654.94781"	"1.02"	"0.00056"	"13/118"	"13"	"118"	"2802021.91149902"	"HCD"	"MS2"	"2.431084"	"77.6"	"100.000"	"60.8232"	"19236"	"19236"	"19209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.8"	""	"57.4"	""	"67.0"	""	"147.8"	""	"211.6"	"200.9"	""	"808"	"24"	"36.000"	"29.000"	"0.147021674595392"	"14"	"0"	"0.0001207"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVQAFQFTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"552.32306"	"1654.95462"	"1654.95686"	"-1.35"	"-0.00075"	"12/88"	"12"	"88"	"11100195.225647"	"HCD"	"MS2"	"10.76023"	"268.0"	"100.000"	"59.8389"	"18834"	"18834"	"18809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.0"	""	"373.0"	""	"415.6"	""	"475.8"	""	"427.4"	"470.8"	""	"777"	"49"	"35.000"	"28.000"	"0.000539996597226388"	"22"	"0.0001308"	"0.0002305"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVQAFQFTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"552.32324"	"1654.95517"	"1654.95686"	"-1.02"	"-0.00056"	"12/88"	"12"	"88"	"8963911.46850586"	"HCD"	"MS2"	"7.128593"	"215.0"	"100.000"	"59.9609"	"18937"	"18937"	"18916"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"304.0"	""	"317.7"	""	"321.4"	""	"383.8"	"2.9"	"335.5"	"367.9"	""	"775"	"49"	"35.000"	"28.000"	"0.00053121668438888"	"23"	"0.0001308"	"0.0002349"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVQAFQFTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"827.98151"	"1654.95574"	"1654.95686"	"-0.68"	"-0.00056"	"9/88"	"9"	"88"	"16462444.5793457"	"HCD"	"MS2"	"0"	"500.5"	"43.577"	"60.2210"	"19044"	"19044"	"19027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"690.9"	""	"688.3"	""	"788.8"	""	"847.3"	"8.1"	"804.5"	"908.1"	""	"749"	"61"	"35.000"	"28.000"	"2.73181837590336E-05"	"20"	"0"	"0.0001252"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVQAFQFTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"827.98193"	"1654.95659"	"1654.95686"	"-0.17"	"-0.00014"	"9/88"	"9"	"88"	"603193.070861816"	"HCD"	"MS2"	"0"	"58.7"	"100.000"	"60.5576"	"19181"	"19181"	"19155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.6"	""	"80.0"	""	"94.2"	""	"85.0"	"3.8"	"102.9"	"103.9"	""	"760"	"66"	"35.000"	"28.000"	"9.09459987434048E-06"	"23"	"0"	"1.753E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVQAFQFTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"827.98193"	"1654.95659"	"1654.95686"	"-0.17"	"-0.00014"	"16/88"	"16"	"88"	"534107.882202148"	"HCD"	"MS2"	"0"	"50.1"	"100.000"	"60.4334"	"19077"	"19077"	"19049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.6"	""	"66.5"	""	"74.4"	""	"81.3"	""	"90.1"	"97.7"	""	"760"	"60"	"35.000"	"28.000"	"3.46564118955246E-05"	"26"	"0"	"4.513E-06"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVQAFQFTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"552.32391"	"1654.95719"	"1654.95686"	"0.20"	"0.00011"	"12/88"	"12"	"88"	"19636429.1204834"	"HCD"	"MS2"	"5.090485"	"183.5"	"40.132"	"60.1315"	"18954"	"18954"	"18937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"241.9"	""	"250.7"	""	"291.6"	""	"307.9"	""	"296.6"	"349.1"	""	"734"	"43"	"35.000"	"28.000"	"0.00165069206745837"	"17"	"0.0001889"	"0.0004419"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVQAFQFTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8367"	"0.0000"	"1"	"1"	"1"	"552.32410"	"1654.95774"	"1654.95686"	"0.53"	"0.00029"	"12/88"	"12"	"88"	"22812015.4371338"	"HCD"	"MS2"	"4.488407"	"196.7"	"38.464"	"60.2602"	"19060"	"19060"	"19043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.7"	""	"282.3"	""	"307.6"	""	"345.0"	"1.2"	"327.9"	"345.5"	""	"732"	"49"	"35.000"	"28.000"	"0.000490321667597892"	"24"	"0.0001889"	"0.000576"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVQAFQFTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"827.98285"	"1654.95842"	"1654.95686"	"0.94"	"0.00078"	"9/88"	"9"	"88"	"12269500.0628052"	"HCD"	"MS2"	"0"	"671.4"	"78.259"	"60.0923"	"18938"	"18938"	"18921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"894.9"	""	"930.4"	""	"1075.8"	""	"1146.0"	"5.8"	"1078.3"	"1221.8"	""	"723"	"65"	"35.000"	"28.000"	"1.1222982911084E-05"	"22"	"0"	"6.113E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVQAFQFTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"827.98340"	"1654.95952"	"1654.95686"	"1.61"	"0.00133"	"12/88"	"12"	"88"	"3097067.27331543"	"HCD"	"MS2"	"0"	"250.4"	"100.000"	"59.9401"	"18929"	"18929"	"18900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.3"	""	"383.0"	""	"382.0"	""	"440.0"	""	"396.1"	"423.9"	""	"725"	"34"	"35.000"	"28.000"	"0.0136241059054561"	"16"	"0"	"9.886E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGVPLPIGMVK"	"[K].aDGVPLPIGMVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"828.00067"	"1654.99407"	"1654.99662"	"-1.54"	"-0.00128"	"10/88"	"10"	"88"	"1677782.99334717"	"HCD"	"MS2"	"41.01635"	"110.0"	"100.000"	"62.0495"	"19790"	"19790"	"19763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.9"	""	"144.9"	""	"140.3"	""	"140.9"	"1.8"	"237.6"	"246.7"	""	"522"	"56"	"34.000"	"27.000"	"6.20355314809092E-05"	"16"	"0"	"1.362E-05"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGVPLPIGMVK"	"[K].aDGVPLPIGMVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"552.33624"	"1654.99417"	"1654.99662"	"-1.48"	"-0.00082"	"10/88"	"10"	"88"	"5104428.50469971"	"HCD"	"MS2"	"22.62379"	"141.8"	"100.000"	"62.0955"	"19809"	"19809"	"19779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.3"	""	"175.7"	""	"189.5"	""	"189.6"	""	"300.2"	"332.8"	""	"522"	"30"	"34.000"	"27.000"	"0.0275829369904764"	"16"	"0"	"0.0001382"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGVPLPIGMVK"	"[K].aDGVPLPIGMVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"828.00104"	"1654.99480"	"1654.99662"	"-1.10"	"-0.00091"	"17/88"	"17"	"88"	"1772514.36914063"	"HCD"	"MS2"	"0"	"113.8"	"100.000"	"61.9181"	"19683"	"19683"	"19657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.5"	""	"149.5"	""	"146.5"	""	"148.4"	""	"245.0"	"261.6"	""	"520"	"52"	"34.000"	"27.000"	"0.000174169998448297"	"16"	"0"	"1.307E-05"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGVPLPIGMVK"	"[K].aDGVPLPIGMVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.33691"	"1654.99619"	"1654.99662"	"-0.26"	"-0.00014"	"11/88"	"11"	"88"	"3601799.83203125"	"HCD"	"MS2"	"13.13763"	"116.6"	"100.000"	"61.9158"	"19682"	"19682"	"19657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.4"	""	"148.3"	""	"150.9"	""	"165.6"	""	"254.2"	"271.8"	""	"500"	"28"	"33.000"	"26.000"	"0.0389888125706738"	"14"	"0"	"0.0001554"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQHGSILGFPK"	"[K].lQHGSILGFPk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"552.33960"	"1655.00425"	"1655.00448"	"-0.14"	"-0.00008"	"14/98"	"14"	"98"	"37417737.8135986"	"HCD"	"MS2"	"21.22765"	"348.2"	"41.443"	"44.9837"	"12848"	"12848"	"12827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"433.4"	""	"460.8"	""	"534.6"	""	"573.5"	""	"631.9"	"673.7"	""	"467"	"36"	"33.000"	"26.000"	"0.00647570244436205"	"17"	"0"	"2.846E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQHGSILGFPK"	"[K].lQHGSILGFPk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"552.33978"	"1655.00479"	"1655.00448"	"0.19"	"0.00010"	"13/98"	"13"	"98"	"10484617.7459717"	"HCD"	"MS2"	"15.38261"	"297.1"	"100.000"	"45.2990"	"12977"	"12977"	"12955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"370.7"	""	"378.8"	""	"446.0"	""	"482.4"	""	"577.0"	"565.9"	""	"458"	"30"	"33.000"	"26.000"	"0.0213223703482133"	"18"	"0"	"1.92E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQHGSILGFPK"	"[K].lQHGSILGFPk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"552.33997"	"1655.00534"	"1655.00448"	"0.52"	"0.00029"	"6/98"	"6"	"98"	"34198620.5483398"	"HCD"	"MS2"	"18.37719"	"351.0"	"45.166"	"44.7587"	"12707"	"12707"	"12688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"426.3"	""	"450.4"	""	"520.5"	""	"575.1"	""	"693.5"	"668.6"	""	"456"	"33"	"33.000"	"26.000"	"0.0113223049290677"	"20"	"0"	"3.56E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLDNAYMEK"	"[K].iTLDNAYMEk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"828.45782"	"1655.90837"	"1655.90786"	"0.31"	"0.00025"	"9/96"	"9"	"96"	"3564222.11126709"	"HCD"	"MS2"	"0"	"309.8"	"100.000"	"49.5209"	"14648"	"14648"	"14623"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"603.8"	""	"445.3"	""	"449.6"	""	"299.8"	"1.8"	"522.3"	"607.7"	""	"910"	"59"	"36.000"	"29.000"	"5.58484850177076E-05"	"25"	"0"	"3.115E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLDNAYMEK"	"[K].iTLDNAYMEk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"828.45795"	"1655.90862"	"1655.90786"	"0.45"	"0.00038"	"18/96"	"18"	"96"	"3618585.81958008"	"HCD"	"MS2"	"0"	"322.5"	"100.000"	"49.8110"	"14813"	"14813"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"620.3"	""	"462.1"	""	"477.3"	""	"314.6"	"0.6"	"535.5"	"639.8"	""	"922"	"61"	"36.000"	"29.000"	"4.00590757900985E-05"	"26"	"0"	"3.21E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLMNQYVNK"	"[K].tSLMNQYVNk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.64386"	"1655.91703"	"1655.91910"	"-1.25"	"-0.00069"	"10/84"	"10"	"84"	"5197306.43676758"	"HCD"	"MS2"	"19.39148"	"193.3"	"79.385"	"41.9740"	"11627"	"11627"	"11602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.5"	""	"262.9"	""	"278.1"	""	"247.5"	""	"382.1"	"378.8"	""	"920"	"28"	"36.000"	"29.000"	"0.0795715525238946"	"14"	"0.0001859"	"0.0003371"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLMNQYVNK"	"[K].tSLMNQYVNk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"828.46265"	"1655.91802"	"1655.91910"	"-0.65"	"-0.00054"	"9/84"	"9"	"84"	"3705133.57592773"	"HCD"	"MS2"	"0"	"308.8"	"100.000"	"41.6482"	"11450"	"11450"	"11419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"473.4"	""	"392.1"	""	"400.3"	""	"366.8"	"2.4"	"599.0"	"696.2"	""	"905"	"60"	"36.000"	"29.000"	"4.73825667993032E-05"	"22"	"0"	"5.487E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLMNQYVNK"	"[K].tSLMNQYVNk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"552.64459"	"1655.91922"	"1655.91910"	"0.08"	"0.00004"	"11/84"	"11"	"84"	"7124618.70532227"	"HCD"	"MS2"	"32.40108"	"178.9"	"56.409"	"41.7194"	"11479"	"11479"	"11451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.6"	""	"252.4"	""	"281.7"	""	"210.9"	""	"347.3"	"354.5"	""	"907"	"39"	"36.000"	"29.000"	"0.00611754667255314"	"19"	"0.0001859"	"0.0003291"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLMNQYVNK"	"[K].tSLMNQYVNk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"828.46338"	"1655.91948"	"1655.91910"	"0.23"	"0.00019"	"9/84"	"9"	"84"	"2832675.19122314"	"HCD"	"MS2"	"0"	"257.0"	"100.000"	"41.8639"	"11582"	"11582"	"11554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.6"	""	"349.0"	""	"328.8"	""	"270.7"	"4.2"	"509.6"	"562.4"	""	"896"	"60"	"36.000"	"29.000"	"4.56328941848244E-05"	"22"	"0"	"4.065E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVQAFqFTDk.[H]"	"N-Term(TMT6plex); Q6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0455"	"0.0000"	"1"	"1"	"1"	"828.48462"	"1655.96196"	"1655.94088"	"12.73"	"0.01054"	"14/88"	"14"	"88"	"2888705.80230713"	"HCD"	"MS2"	"0"	"244.3"	"100.000"	"59.7908"	"18814"	"18814"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.0"	""	"364.3"	""	"393.4"	""	"430.7"	"1.0"	"405.5"	"388.1"	""	"662"	"44"	"35.000"	"28.000"	"0.00144486740471495"	"21"	"0.0001889"	"0.000944"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVqAFQFTDk.[H]"	"N-Term(TMT6plex); Q3(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0455"	"2"	"2"	"2"	"828.48462"	"1655.96196"	"1655.94088"	"12.73"	"0.01054"	"8/88"	"8"	"88"	"2888705.80230713"	"HCD"	"MS2"	"0"	"244.3"	"100.000"	"59.7908"	"18814"	"18814"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.0"	""	"364.3"	""	"393.4"	""	"430.7"	"1.0"	"405.5"	"388.1"	""	"662"	"42"	"35.000"	"28.000"	"0.00206932161308752"	"21"	"0.0001889"	"0.001028"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSYLAVIEGAK"	"[R].fSYLAVIEGAk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20417"	"Tyrosine-protein phosphatase non-receptor type 1 OS=Rattus norvegicus OX=10116 GN=Ptpn1 PE=1 SV=1"	"P20417"	"Tyrosine-protein phosphatase non-receptor type 1 OS=Rattus norvegicus OX=10116 GN=Ptpn1 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"552.66351"	"1655.97599"	"1655.97726"	"-0.77"	"-0.00043"	"10/92"	"10"	"92"	"1597850.11431885"	"HCD"	"MS2"	"24.78629"	"48.0"	"100.000"	"71.3189"	"23513"	"23513"	"23491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.7"	""	"59.0"	""	"63.0"	""	"86.9"	""	"94.4"	"93.9"	""	"608"	"21"	"34.000"	"27.000"	"0.224840003617704"	"16"	"0.0001889"	"0.0008644"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSYLAVIEGAK"	"[R].fSYLAVIEGAk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20417"	"Tyrosine-protein phosphatase non-receptor type 1 OS=Rattus norvegicus OX=10116 GN=Ptpn1 PE=1 SV=1"	"P20417"	"Tyrosine-protein phosphatase non-receptor type 1 OS=Rattus norvegicus OX=10116 GN=Ptpn1 PE=1 SV=1"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"552.66412"	"1655.97782"	"1655.97726"	"0.33"	"0.00018"	"12/92"	"12"	"92"	"1737523.04992676"	"HCD"	"MS2"	"24.7112"	"54.4"	"100.000"	"71.2573"	"23540"	"23540"	"23514"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.4"	""	"68.5"	""	"73.5"	""	"94.2"	"0.4"	"107.7"	"97.7"	""	"607"	"39"	"34.000"	"27.000"	"0.00375974764011967"	"19"	"0"	"7.876E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTVYLTPYR"	"[K].kGTVYLTPYR.[V]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q8R478"	"WW domain-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Wbp2 PE=1 SV=1"	"Q8R478"	"WW domain-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Wbp2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.66748"	"1655.98789"	"1655.98850"	"-0.37"	"-0.00020"	"9/98"	"9"	"98"	"11630707.2802734"	"HCD"	"MS2"	"44.12513"	"553.6"	"92.095"	"35.2926"	"8889"	"8889"	"8858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"793.2"	""	"752.4"	""	"807.6"	""	"879.5"	""	"972.4"	"1042.6"	""	"572"	"12"	"34.000"	"27.000"	"1.82123518979664"	"13"	"0.0001889"	"0.0003947"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVHPISTMIK"	"[R].rVHPISTmIk.[G]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.67212"	"1656.00180"	"1656.00310"	"-0.78"	"-0.00043"	"7/92"	"7"	"92"	"3774864.02801514"	"HCD"	"MS2"	"9.738911"	"128.9"	"100.000"	"27.3230"	"5639"	"5639"	"5613"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.8"	""	"147.0"	""	"163.6"	""	"296.7"	"1.5"	"229.9"	"223.0"	""	"466"	"17"	"33.000"	"26.000"	"0.516839765813451"	"14"	"0.0003839"	"0.0018"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVHPISTMIK"	"[R].rVHPISTmIk.[G]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.67218"	"1656.00199"	"1656.00310"	"-0.67"	"-0.00037"	"9/92"	"9"	"92"	"4428596.015625"	"HCD"	"MS2"	"4.126414"	"123.9"	"100.000"	"27.4001"	"5705"	"5705"	"5682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.0"	""	"143.5"	""	"167.5"	""	"310.0"	"2.8"	"196.7"	"192.8"	""	"466"	"28"	"33.000"	"26.000"	"0.03857944014884"	"14"	"7.476E-05"	"0.000196"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGMAATLAGTMK"	"[R].fGMAATLAGTMk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"552.97827"	"1656.92026"	"1656.92174"	"-0.89"	"-0.00049"	"9/96"	"9"	"96"	"2740226.01544189"	"HCD"	"MS2"	"18.74172"	"89.9"	"100.000"	"59.8573"	"18895"	"18895"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.4"	""	"143.7"	""	"145.4"	""	"119.0"	""	"152.2"	"159.7"	""	"960"	"56"	"36.000"	"29.000"	"0.000112264187455649"	""	"0"	"2.478E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGMAATLAGTMK"	"[R].fGMAATLAGTMk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.8514"	"0.0000"	"1"	"1"	"1"	"828.96411"	"1656.92095"	"1656.92174"	"-0.48"	"-0.00040"	"10/96"	"10"	"96"	"977074.764709473"	"HCD"	"MS2"	"0"	"99.6"	"100.000"	"59.6918"	"18774"	"18774"	"18745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.6"	""	"164.4"	""	"157.8"	""	"112.5"	""	"168.6"	"185.0"	""	"955"	"74"	"36.000"	"29.000"	"1.7138522379299E-06"	"28"	"0"	"2.518E-06"	"1.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQFTDK"	"[R].lVqAFqFTDk.[H]"	"N-Term(TMT6plex); Q3(Deamidated); Q6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.4500"	"0.0000"	"1"	"1"	"1"	"552.97974"	"1656.92466"	"1656.92490"	"-0.14"	"-0.00008"	"9/88"	"9"	"88"	"2353315.73376465"	"HCD"	"MS2"	"18.35464"	"80.2"	"100.000"	"59.8091"	"18822"	"18822"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.4"	""	"110.5"	""	"132.9"	""	"123.3"	"3.6"	"138.5"	"144.1"	""	"888"	"20"	"36.000"	"29.000"	"0.430906425456997"	"25"	"0.001217"	"0.0178"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGMAATLAGTMK"	"[R].fGMAATLAGTMk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"828.96619"	"1656.92510"	"1656.92174"	"2.03"	"0.00168"	"11/96"	"11"	"96"	"1261553.13562012"	"HCD"	"MS2"	"21.50158"	"122.1"	"100.000"	"59.8964"	"18911"	"18911"	"18884"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.6"	""	"199.4"	""	"196.6"	""	"171.4"	""	"195.4"	"218.8"	""	"876"	"40"	"36.000"	"29.000"	"0.00427045461320216"	""	"0"	"1.384E-05"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLNISGPPLK"	"[R].eMLNISGPPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"552.99622"	"1656.97409"	"1656.97588"	"-1.08"	"-0.00060"	"11/104"	"11"	"104"	"3175818.30664063"	"HCD"	"MS2"	"58.33232"	"98.0"	"100.000"	"54.0546"	"16475"	"16475"	"16445"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.6"	""	"152.6"	""	"135.1"	""	"111.3"	""	"196.6"	"179.1"	""	"662"	"45"	"35.000"	"28.000"	"0.00100653294349885"	"23"	"0"	"0.0001109"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLNISGPPLK"	"[R].eMLNISGPPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"552.99646"	"1656.97483"	"1656.97588"	"-0.64"	"-0.00035"	"12/104"	"12"	"104"	"6649811.75427246"	"HCD"	"MS2"	"6.68242"	"141.3"	"100.000"	"54.3528"	"16596"	"16596"	"16577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.4"	""	"203.5"	""	"207.5"	""	"175.0"	""	"265.7"	"288.3"	""	"653"	"33"	"35.000"	"28.000"	"0.0164771913654492"	"21"	"0.0001308"	"0.0002104"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLNISGPPLK"	"[R].eMLNISGPPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"828.99121"	"1656.97515"	"1656.97588"	"-0.45"	"-0.00037"	"10/104"	"10"	"104"	"1908989.04901123"	"HCD"	"MS2"	"27.82149"	"96.6"	"100.000"	"54.6006"	"16751"	"16751"	"16725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.2"	""	"118.1"	""	"149.8"	""	"102.8"	"0.4"	"201.6"	"203.4"	""	"651"	"15"	"35.000"	"28.000"	"1.02932137838481"	"19"	"0"	"0.000148"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLNISGPPLK"	"[R].eMLNISGPPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"552.99664"	"1656.97538"	"1656.97588"	"-0.31"	"-0.00017"	"13/104"	"13"	"104"	"8708788.59924316"	"HCD"	"MS2"	"17.27221"	"177.6"	"100.000"	"54.5892"	"16746"	"16746"	"16725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.9"	""	"248.0"	""	"241.3"	""	"259.0"	""	"341.9"	"366.0"	""	"652"	"17"	"35.000"	"28.000"	"0.605644252359894"	"17"	"0.0001889"	"0.0008851"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLNISGPPLK"	"[R].eMLNISGPPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"552.99670"	"1656.97556"	"1656.97588"	"-0.20"	"-0.00011"	"13/104"	"13"	"104"	"3604048.61932373"	"HCD"	"MS2"	"0"	"108.0"	"100.000"	"54.2770"	"16619"	"16619"	"16589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.1"	""	"160.8"	""	"176.9"	""	"133.5"	"0.5"	"199.5"	"203.9"	""	"648"	"38"	"35.000"	"28.000"	"0.00519451506583573"	"18"	"0"	"9.497E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLNISGPPLK"	"[R].eMLNISGPPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"828.99207"	"1656.97685"	"1656.97588"	"0.59"	"0.00048"	"15/104"	"15"	"104"	"1458601.512146"	"HCD"	"MS2"	"22.01235"	"112.0"	"100.000"	"54.1303"	"16506"	"16506"	"16477"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.5"	""	"174.0"	""	"157.3"	""	"110.7"	""	"225.0"	"227.9"	""	"656"	"56"	"35.000"	"28.000"	"8.58764026695828E-05"	"24"	"0"	"2.387E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLNISGPPLK"	"[R].eMLNISGPPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"828.99329"	"1656.97930"	"1656.97588"	"2.06"	"0.00171"	"8/104"	"8"	"104"	"1063601.96356201"	"HCD"	"MS2"	"0"	"86.0"	"100.000"	"54.2724"	"16617"	"16617"	"16589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"129.7"	""	"130.7"	""	"122.9"	""	"88.1"	"0.5"	"181.2"	"163.0"	""	"657"	"55"	"35.000"	"28.000"	"0.000103165710593834"	"25"	"0"	"2.732E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGPPVSELITK"	"[K].aSGPPVSELITk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"828.99976"	"1656.99224"	"1656.99364"	"-0.85"	"-0.00070"	"10/106"	"10"	"106"	"1264201.63140869"	"HCD"	"MS2"	"0"	"90.5"	"100.000"	"47.3346"	"13805"	"13805"	"13778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.0"	"2.7"	"135.2"	""	"169.0"	""	"127.7"	""	"178.5"	"122.1"	""	"588"	"80"	"34.000"	"27.000"	"3.1721033633557E-07"	"23"	"0"	"6.99E-07"	"1.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGPPVSELITK"	"[K].aSGPPVSELITk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.9265"	"0.0000"	"1"	"1"	"1"	"829.00031"	"1656.99333"	"1656.99364"	"-0.19"	"-0.00015"	"18/106"	"18"	"106"	"1200630.83654785"	"HCD"	"MS2"	"0"	"90.6"	"100.000"	"47.0387"	"13636"	"13636"	"13608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.2"	""	"154.8"	""	"163.8"	""	"127.6"	"1.4"	"179.2"	"107.0"	""	"565"	"69"	"34.000"	"27.000"	"3.99041856355929E-06"	"22"	"0"	"2.064E-06"	"1.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGTFQNVSVK"	"[R].yGGTFQNVSVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"829.46948"	"1657.93169"	"1657.93138"	"0.19"	"0.00016"	"17/100"	"17"	"100"	"426167.819458008"	"HCD"	"MS2"	"0"	"44.8"	"100.000"	"40.5383"	"10995"	"10995"	"10965"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.6"	""	"59.9"	""	"64.2"	""	"59.6"	"0.8"	"82.1"	"89.6"	""	"975"	"51"	"36.000"	"29.000"	"0.000358075510726593"	"23"	"0"	"1.515E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTSGDYKK"	"[K].gDTSGDYkk.[A]"	"N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"553.31628"	"1657.93430"	"1657.93641"	"-1.27"	"-0.00070"	"7/74"	"7"	"74"	"2315166.02154541"	"HCD"	"MS2"	"23.12852"	"160.0"	"100.000"	"26.3025"	"5226"	"5226"	"5202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"299.6"	""	"190.5"	""	"212.5"	""	"267.0"	"1.1"	"262.9"	"279.7"	""	"930"	"5"	"36.000"	"29.000"	"14.4029997413571"	"13"	"0.0003839"	"0.001825"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLLDPAWEK"	"[R].dLLLDPAWEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"553.32294"	"1657.95426"	"1657.95653"	"-1.37"	"-0.00076"	"11/88"	"11"	"88"	"1016069.14562988"	"HCD"	"MS2"	"18.08811"	"37.2"	"100.000"	"66.3907"	"21510"	"21510"	"21481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.6"	""	"47.9"	""	"43.8"	""	"56.2"	""	"85.0"	"81.0"	""	"851"	"20"	"36.000"	"29.000"	"0.432413818816481"	"24"	"0.0001889"	"0.0004812"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLLDPAWEK"	"[R].dLLLDPAWEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"829.48096"	"1657.95464"	"1657.95653"	"-1.14"	"-0.00095"	"14/88"	"14"	"88"	"4274907.97491455"	"HCD"	"MS2"	"28.23724"	"249.5"	"100.000"	"66.0250"	"21413"	"21413"	"21395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"240.1"	""	"239.5"	""	"237.9"	""	"406.0"	"9.3"	"611.7"	"634.1"	""	"850"	"42"	"36.000"	"29.000"	"0.0028339287691579"	"20"	"0"	"6.43E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLLDPAWEK"	"[R].dLLLDPAWEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"553.32355"	"1657.95609"	"1657.95653"	"-0.27"	"-0.00015"	"12/88"	"12"	"88"	"3671665.00708008"	"HCD"	"MS2"	"2.40031"	"109.4"	"100.000"	"66.0700"	"21379"	"21379"	"21353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.7"	""	"118.3"	""	"106.7"	""	"186.9"	""	"268.3"	"267.5"	""	"845"	"34"	"36.000"	"29.000"	"0.0180229846693673"	"20"	"0.0001889"	"0.0004624"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLLDPAWEK"	"[R].dLLLDPAWEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"553.32355"	"1657.95609"	"1657.95653"	"-0.27"	"-0.00015"	"11/88"	"11"	"88"	"4554544.82427979"	"HCD"	"MS2"	"16.88071"	"126.5"	"100.000"	"65.9998"	"21403"	"21403"	"21379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.9"	""	"124.3"	""	"124.0"	""	"197.7"	""	"303.1"	"331.6"	""	"845"	"43"	"36.000"	"29.000"	"0.0023325271809612"	"21"	"0.0001889"	"0.000543"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLLDPAWEK"	"[R].dLLLDPAWEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"829.48212"	"1657.95696"	"1657.95653"	"0.26"	"0.00021"	"14/88"	"14"	"88"	"4283834.1204834"	"HCD"	"MS2"	"26.54602"	"265.1"	"100.000"	"66.1254"	"21402"	"21402"	"21385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.2"	""	"246.3"	""	"239.2"	""	"424.9"	"0.6"	"669.3"	"683.1"	""	"831"	"37"	"36.000"	"29.000"	"0.00810160431199469"	"16"	"0"	"4.459E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEDLQILIK"	"[K].dLEDLQILIk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"553.34235"	"1658.01249"	"1658.01404"	"-0.94"	"-0.00052"	"11/86"	"11"	"86"	"1024964.25427246"	"HCD"	"MS2"	"0"	"35.2"	"100.000"	"75.4266"	"25242"	"25242"	"25215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.5"	""	"30.9"	""	"50.0"	""	"58.2"	"1.0"	"73.5"	"80.5"	""	"482"	"40"	"33.000"	"26.000"	"0.00242670532193285"	"24"	"7.476E-05"	"0.0001863"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEDLQILIK"	"[K].dLEDLQILIk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"553.34265"	"1658.01340"	"1658.01404"	"-0.39"	"-0.00021"	"11/86"	"11"	"86"	"1060116.10913086"	"HCD"	"MS2"	"10.72995"	"36.4"	"100.000"	"75.4733"	"25209"	"25209"	"25185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.9"	""	"34.5"	""	"47.7"	""	"55.0"	"1.5"	"81.3"	"79.8"	""	"448"	"42"	"33.000"	"26.000"	"0.00155327380547711"	"25"	"0.0001859"	"0.0003746"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYTMTPLLGQR"	"[R].sFYTmTPLLGQR.[F]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"829.94159"	"1658.87590"	"1658.87734"	"-0.87"	"-0.00072"	"8/100"	"8"	"100"	"714668.205383301"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"48.5072"	"14237"	"14237"	"14208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.6"	""	"52.1"	""	"54.2"	""	"78.0"	""	"71.4"	"75.0"	""	"924"	"42"	"36.000"	"29.000"	"0.00277742266717274"	"16"	"0.0006037"	"0.004003"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYTMTPLLGQR"	"[R].sFYTmTPLLGQR.[F]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"829.94281"	"1658.87834"	"1658.87734"	"0.60"	"0.00050"	"9/100"	"9"	"100"	"643197.672668457"	"HCD"	"MS2"	"0"	"39.3"	"100.000"	"48.7774"	"14395"	"14395"	"14367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.3"	""	"57.3"	""	"51.2"	""	"72.6"	""	"72.7"	"70.8"	""	"946"	"30"	"36.000"	"29.000"	"0.0480685631727839"	"17"	"0.0006037"	"0.005271"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFPLSIQPMGVR"	"[K].gQFPLSIQPMGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8904"	"0.0000"	"1"	"1"	"1"	"553.64642"	"1658.92472"	"1658.92496"	"-0.15"	"-0.00008"	"9/118"	"9"	"118"	"10893216.6318359"	"HCD"	"MS2"	"9.642225"	"63.9"	"100.000"	"57.4823"	"17929"	"17929"	"17909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.8"	"4.0"	"92.3"	""	"101.7"	""	"84.9"	"0.9"	"119.3"	"102.1"	""	"935"	"73"	"36.000"	"29.000"	"2.48188477677987E-06"	"25"	"0"	"3.846E-06"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFPLSIQPMGVR"	"[K].gQFPLSIQPMGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"829.96619"	"1658.92510"	"1658.92496"	"0.08"	"0.00007"	"10/118"	"10"	"118"	"1421674.98693848"	"HCD"	"MS2"	"0"	"79.4"	"100.000"	"57.7629"	"18044"	"18044"	"18021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.9"	""	"135.7"	""	"102.3"	""	"100.1"	"2.0"	"145.5"	"145.9"	""	"943"	"29"	"36.000"	"29.000"	"0.0555241216515061"	"24"	"0"	"5.871E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFPLSIQPMGVR"	"[K].gQFPLSIQPMGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"829.96619"	"1658.92510"	"1658.92496"	"0.08"	"0.00007"	"10/118"	"10"	"118"	"3784138.40765381"	"HCD"	"MS2"	"0"	"168.3"	"100.000"	"57.2415"	"17777"	"17777"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"311.8"	""	"303.2"	""	"216.4"	""	"175.7"	"3.0"	"294.6"	"287.1"	""	"943"	"58"	"36.000"	"29.000"	"7.48999791963853E-05"	"22"	"0"	"9.208E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFPLSIQPMGVR"	"[K].gQFPLSIQPMGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"553.64661"	"1658.92527"	"1658.92496"	"0.18"	"0.00010"	"9/118"	"9"	"118"	"9515707.94610596"	"HCD"	"MS2"	"15.3329"	"59.0"	"100.000"	"57.2785"	"17792"	"17792"	"17771"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.4"	"3.7"	"91.6"	""	"80.6"	""	"84.7"	"2.5"	"102.3"	"101.8"	""	"942"	"70"	"36.000"	"29.000"	"4.46705096214722E-06"	"24"	"0"	"3.269E-06"	"1.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFPLSIQPMGVR"	"[K].gQFPLSIQPMGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"829.96643"	"1658.92558"	"1658.92496"	"0.37"	"0.00031"	"9/118"	"9"	"118"	"4464368.75494385"	"HCD"	"MS2"	"0"	"181.2"	"100.000"	"57.4452"	"17914"	"17914"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"328.6"	""	"322.3"	""	"229.2"	""	"194.5"	""	"322.4"	"318.8"	""	"927"	"54"	"36.000"	"29.000"	"0.000201859753453261"	"21"	"0"	"1.908E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFPLSIQPMGVR"	"[K].gQFPLSIQPMGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"829.96655"	"1658.92583"	"1658.92496"	"0.52"	"0.00043"	"8/118"	"8"	"118"	"1671169.87158203"	"HCD"	"MS2"	"0"	"91.0"	"100.000"	"57.5507"	"17903"	"17903"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.1"	""	"155.2"	""	"104.2"	""	"109.3"	""	"160.4"	"174.5"	""	"944"	"43"	"36.000"	"29.000"	"0.00218746946115528"	"22"	"0"	"1.489E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"553.68036"	"1659.02652"	"1659.02792"	"-0.84"	"-0.00047"	"6/88"	"6"	"88"	"2574587.01861572"	"HCD"	"MS2"	"4.391216"	"63.6"	"100.000"	"85.3417"	"29274"	"29274"	"29250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.3"	""	"94.3"	""	"107.9"	""	"114.6"	""	"86.9"	"84.9"	""	"474"	"39"	"33.000"	"26.000"	"0.00280380848706864"	"24"	"0"	"2.335E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"830.01691"	"1659.02654"	"1659.02792"	"-0.83"	"-0.00069"	"20/88"	"20"	"88"	"5760975.37854004"	"HCD"	"MS2"	"0"	"376.0"	"100.000"	"85.5974"	"29375"	"29375"	"29358"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"637.9"	""	"525.8"	""	"639.5"	""	"628.7"	"2.0"	"489.1"	"624.7"	""	"474"	"86"	"33.000"	"26.000"	"6.42315416758129E-08"	""	"0"	"2.773E-06"	"1.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"553.68042"	"1659.02671"	"1659.02792"	"-0.73"	"-0.00040"	"13/88"	"13"	"88"	"1397445.18383789"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"85.2617"	"29191"	"29191"	"29163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.9"	""	"55.1"	""	"70.0"	""	"59.6"	""	"53.6"	"64.4"	""	"474"	"33"	"33.000"	"26.000"	"0.0132357436152629"	"24"	"0"	"2.14E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"553.68048"	"1659.02689"	"1659.02792"	"-0.62"	"-0.00034"	"13/88"	"13"	"88"	"787322.380493164"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"85.8433"	"29422"	"29422"	"29400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.4"	""	"36.0"	""	"36.9"	""	"39.8"	""	"43.0"	"46.6"	""	"469"	"32"	"33.000"	"26.000"	"0.0135251735665483"	"19"	"0"	"5.185E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"830.01709"	"1659.02690"	"1659.02792"	"-0.61"	"-0.00051"	"17/88"	"17"	"88"	"341119.356811523"	"HCD"	"MS2"	"6.296927"	"26.0"	"100.000"	"85.9089"	"29500"	"29500"	"29483"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.2"	""	"40.1"	""	"45.5"	""	"41.8"	""	"34.5"	"43.1"	""	"469"	"63"	"33.000"	"26.000"	"1.27099208799181E-05"	""	"0"	"9.564E-06"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8375"	"0.0000"	"1"	"1"	"1"	"830.01715"	"1659.02703"	"1659.02792"	"-0.54"	"-0.00045"	"10/88"	"10"	"88"	"251844.145202637"	"HCD"	"MS2"	"3.20381"	"23.3"	"100.000"	"85.8784"	"29436"	"29436"	"29416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.7"	""	"32.4"	""	"37.6"	""	"41.7"	""	"37.4"	"35.8"	""	"470"	"80"	"33.000"	"26.000"	"2.2287833887571E-07"	""	"0"	"2.877E-06"	"1.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"830.01721"	"1659.02715"	"1659.02792"	"-0.47"	"-0.00039"	"10/88"	"10"	"88"	"929900.730102539"	"HCD"	"MS2"	"5.589384"	"69.4"	"100.000"	"85.2872"	"29201"	"29201"	"29179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.8"	""	"100.3"	""	"115.5"	""	"120.8"	""	"95.2"	"105.6"	""	"470"	"62"	"33.000"	"26.000"	"1.62206353902457E-05"	"22"	"0"	"1.201E-05"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.7805"	"0.0000"	"1"	"1"	"1"	"553.68066"	"1659.02744"	"1659.02792"	"-0.29"	"-0.00016"	"6/88"	"6"	"88"	"694762.146362305"	"HCD"	"MS2"	"4.044841"	"20.1"	"100.000"	"85.9487"	"29516"	"29516"	"29497"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.3"	""	"30.3"	""	"26.9"	""	"41.1"	""	"22.6"	"34.7"	""	"469"	"41"	"33.000"	"26.000"	"0.00168322761303134"	"24"	"0"	"1.753E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"830.01752"	"1659.02776"	"1659.02792"	"-0.10"	"-0.00008"	"10/88"	"10"	"88"	"458212.985046387"	"HCD"	"MS2"	"35.45138"	"37.4"	"100.000"	"85.3094"	"29261"	"29261"	"29234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.1"	""	"57.6"	""	"59.7"	""	"64.3"	""	"49.2"	"52.8"	""	"467"	"58"	"33.000"	"26.000"	"3.52603715997329E-05"	"21"	"0"	"9.631E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"830.01782"	"1659.02837"	"1659.02792"	"0.27"	"0.00022"	"11/88"	"11"	"88"	"4456062.05456543"	"HCD"	"MS2"	"0"	"290.1"	"100.000"	"85.5848"	"29322"	"29322"	"29305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"495.0"	""	"397.4"	""	"481.0"	""	"458.3"	""	"430.6"	"479.3"	""	"464"	"90"	"33.000"	"26.000"	"2.13053162384191E-08"	""	"0"	"2.051E-06"	"1.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.8302"	"0.0000"	"1"	"1"	"1"	"553.68146"	"1659.02982"	"1659.02792"	"1.14"	"0.00063"	"7/88"	"7"	"88"	"11178994.9248657"	"HCD"	"MS2"	"4.320415"	"208.3"	"86.422"	"85.6369"	"29391"	"29391"	"29374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"385.2"	""	"293.9"	""	"360.5"	""	"311.4"	"3.5"	"287.9"	"322.4"	""	"433"	"53"	"33.000"	"26.000"	"0.000114145264998041"	"25"	"0"	"7.236E-06"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLMk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"553.68164"	"1659.03037"	"1659.02792"	"1.48"	"0.00082"	"15/88"	"15"	"88"	"15000067.2744141"	"HCD"	"MS2"	"4.217043"	"206.9"	"64.587"	"85.5456"	"29306"	"29306"	"29294"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"356.5"	""	"297.6"	""	"349.3"	""	"342.5"	""	"296.5"	"311.1"	""	"439"	"45"	"33.000"	"26.000"	"0.000658316172917789"	"25"	"0"	"1.74E-05"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAFMPFSTGK"	"[K].sEAFMPFSTGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"830.44318"	"1659.87908"	"1659.88165"	"-1.55"	"-0.00129"	"10/96"	"10"	"96"	"2666376.0614624"	"HCD"	"MS2"	"7.721845"	"210.7"	"100.000"	"52.4024"	"15870"	"15870"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"463.2"	""	"389.9"	""	"336.4"	""	"192.3"	""	"240.6"	"363.2"	""	"1025"	"51"	"37.000"	"30.000"	"0.000365337177939841"	"24"	"0"	"6.587E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAFMPFSTGK"	"[K].sEAFMPFSTGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"553.96466"	"1659.87943"	"1659.88165"	"-1.34"	"-0.00074"	"11/96"	"11"	"96"	"5989943.36132813"	"HCD"	"MS2"	"14.7805"	"186.1"	"100.000"	"52.2157"	"15744"	"15744"	"15714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.0"	""	"300.2"	""	"331.0"	""	"214.1"	"1.3"	"258.4"	"318.2"	""	"1024"	"30"	"37.000"	"30.000"	"0.0466949549750226"	"19"	"0.0001889"	"0.0007485"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAFMPFSTGK"	"[K].sEAFMPFSTGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"553.96533"	"1659.88144"	"1659.88165"	"-0.12"	"-0.00007"	"11/96"	"11"	"96"	"7122436.74700928"	"HCD"	"MS2"	"15.83284"	"203.3"	"100.000"	"52.4326"	"15882"	"15882"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"400.1"	""	"356.9"	""	"323.0"	""	"222.3"	""	"272.6"	"345.3"	""	"1032"	"39"	"37.000"	"30.000"	"0.00582974691971164"	"23"	"0.0001889"	"0.0003947"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAFMPFSTGK"	"[K].sEAFMPFSTGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"830.44482"	"1659.88237"	"1659.88165"	"0.43"	"0.00036"	"7/96"	"7"	"96"	"935349.275512695"	"HCD"	"MS2"	"48.26129"	"70.1"	"100.000"	"52.7267"	"16003"	"16003"	"15974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.2"	""	"100.2"	""	"98.2"	""	"99.8"	"0.4"	"98.7"	"130.5"	""	"1022"	"6"	"37.000"	"30.000"	"13.6590627482695"	"18"	"0.0001889"	"0.0007301"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAFMPFSTGK"	"[K].sEAFMPFSTGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"830.44495"	"1659.88262"	"1659.88165"	"0.58"	"0.00048"	"10/96"	"10"	"96"	"2588338.65155029"	"HCD"	"MS2"	"21.18464"	"198.0"	"100.000"	"52.2111"	"15742"	"15742"	"15714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.3"	""	"343.4"	""	"327.6"	""	"189.4"	"1.8"	"233.9"	"331.3"	""	"1022"	"61"	"37.000"	"30.000"	"3.79682779465215E-05"	"26"	"0"	"5.622E-06"	"1.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLINNMLDK"	"[K].iQLINNMLDk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"830.49432"	"1659.98137"	"1659.98678"	"-3.26"	"-0.00271"	"9/88"	"9"	"88"	"1405872.99102783"	"HCD"	"MS2"	"0"	"112.6"	"100.000"	"67.3856"	"21960"	"21960"	"21938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.5"	""	"164.8"	""	"163.8"	""	"130.1"	"0.4"	"208.1"	"217.1"	""	"776"	"64"	"35.000"	"28.000"	"1.45824912863916E-05"	""	"0"	"1.494E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLINNMLDK"	"[K].iQLINNMLDk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"554.00012"	"1659.98581"	"1659.98678"	"-0.58"	"-0.00032"	"11/88"	"11"	"88"	"4157243.24420166"	"HCD"	"MS2"	"24.53493"	"113.7"	"100.000"	"67.4156"	"21972"	"21972"	"21949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.5"	""	"162.2"	""	"164.0"	""	"154.0"	""	"210.2"	"225.6"	""	"775"	"36"	"35.000"	"28.000"	"0.00931690585002687"	"20"	"0"	"9.956E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLINNMLDK"	"[K].iQLINNMLDk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"830.49707"	"1659.98686"	"1659.98678"	"0.05"	"0.00004"	"9/88"	"9"	"88"	"2354818.27056885"	"HCD"	"MS2"	"0"	"178.3"	"100.000"	"67.6792"	"22079"	"22079"	"22058"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.5"	""	"235.1"	""	"265.2"	""	"203.8"	"4.0"	"344.2"	"359.2"	""	"788"	"64"	"35.000"	"28.000"	"1.59770362966663E-05"	""	"0"	"3.686E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLINNMLDK"	"[K].iQLINNMLDk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"830.49738"	"1659.98747"	"1659.98678"	"0.42"	"0.00035"	"9/88"	"9"	"88"	"2395469.82049561"	"HCD"	"MS2"	"23.96217"	"178.4"	"100.000"	"67.8418"	"22094"	"22094"	"22074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.1"	""	"209.9"	""	"240.5"	""	"239.6"	""	"373.7"	"390.1"	""	"766"	"59"	"35.000"	"28.000"	"4.32711835319682E-05"	"25"	"0"	"2.11E-05"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLINNMLDK"	"[K].iQLINNMLDk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"830.49750"	"1659.98772"	"1659.98678"	"0.56"	"0.00047"	"9/88"	"9"	"88"	"1297115.51086426"	"HCD"	"MS2"	"0"	"105.4"	"100.000"	"67.5086"	"21959"	"21959"	"21945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.4"	""	"151.7"	""	"164.6"	""	"132.7"	""	"170.2"	"210.4"	""	"765"	"62"	"35.000"	"28.000"	"2.2679393665185E-05"	""	"0"	"9.409E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLISDPTTDK"	"[K].vLLISDPTTDk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"830.49762"	"1659.98796"	"1659.99331"	"-3.22"	"-0.00267"	"11/90"	"11"	"90"	"414019.575622559"	"HCD"	"MS2"	"29.12854"	"37.7"	"100.000"	"52.6410"	"15918"	"15918"	"15890"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.3"	""	"58.7"	""	"53.8"	""	"48.0"	""	"61.7"	"71.4"	""	"765"	"30"	"35.000"	"28.000"	"0.0360272770669987"	"18"	"0"	"0.0001679"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLINNMLDK"	"[K].iQLINNMLDk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"554.00085"	"1659.98801"	"1659.98678"	"0.74"	"0.00041"	"11/88"	"11"	"88"	"2972924.84173584"	"HCD"	"MS2"	"12.39871"	"87.1"	"100.000"	"67.5198"	"21964"	"21964"	"21945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.6"	""	"113.1"	""	"136.8"	""	"107.2"	"1.4"	"170.3"	"167.4"	""	"765"	"40"	"35.000"	"28.000"	"0.00366970741554844"	"21"	"0"	"8.29E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLISDPTTDK"	"[K].vLLISDPTTDk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"830.50073"	"1659.99419"	"1659.99331"	"0.53"	"0.00044"	"9/90"	"9"	"90"	"714891.723144531"	"HCD"	"MS2"	"31.6789"	"58.5"	"100.000"	"52.7682"	"16020"	"16020"	"15990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.0"	""	"81.1"	""	"84.0"	""	"89.3"	""	"88.3"	"98.9"	""	"730"	"38"	"35.000"	"28.000"	"0.00533694668676702"	"19"	"0"	"5.069E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMEAVQGLLEQGR"	"[R].tMEAVQGLLEQGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.94910"	"1660.89092"	"1660.88897"	"1.17"	"0.00097"	"15/128"	"15"	"128"	"730609.726257324"	"HCD"	"MS2"	"46.18031"	"56.9"	"100.000"	"55.6908"	"17144"	"17144"	"17115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.0"	""	"56.3"	""	"70.5"	""	"98.6"	"1.3"	"115.4"	"115.6"	""	"1091"	"17"	"37.000"	"30.000"	"0.979027193437142"	"14"	"0"	"0.0001771"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPDLEDLMK"	"[K].eLPDLEDLMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"830.96509"	"1660.92290"	"1660.92318"	"-0.17"	"-0.00014"	"15/84"	"15"	"84"	"1126491.6138916"	"HCD"	"MS2"	"41.2863"	"80.7"	"100.000"	"73.5288"	"24467"	"24467"	"24447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.8"	""	"81.1"	""	"96.6"	""	"148.6"	"1.2"	"172.2"	"159.9"	""	"1090"	"24"	"37.000"	"30.000"	"0.233558943616604"	"23"	"0.0001889"	"0.0009574"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPDLEDLMK"	"[K].eLPDLEDLMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"830.96564"	"1660.92400"	"1660.92318"	"0.49"	"0.00041"	"9/84"	"9"	"84"	"920833.228942871"	"HCD"	"MS2"	"27.68361"	"75.9"	"100.000"	"73.5032"	"24405"	"24405"	"24385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.5"	""	"91.8"	""	"87.5"	""	"125.2"	""	"145.7"	"156.8"	""	"1066"	"35"	"37.000"	"30.000"	"0.0180188557697788"	"23"	"0"	"0.000175"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EADDIVNWLK"	"[R].eADDIVNWLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.5962"	"0.0000"	"1"	"1"	"1"	"830.96851"	"1660.92974"	"1660.93104"	"-0.79"	"-0.00065"	"9/84"	"9"	"84"	"2265998.75360107"	"HCD"	"MS2"	"11.12874"	"168.5"	"100.000"	"67.9091"	"22173"	"22173"	"22154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.9"	""	"175.8"	""	"200.5"	""	"298.4"	""	"315.6"	"339.7"	""	"1035"	"52"	"37.000"	"30.000"	"0.000293704333298923"	""	"0"	"3.709E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EADDIVNWLK"	"[R].eADDIVNWLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"830.96899"	"1660.93071"	"1660.93104"	"-0.20"	"-0.00017"	"9/84"	"9"	"84"	"2206209.84594727"	"HCD"	"MS2"	"13.30415"	"192.7"	"100.000"	"68.0007"	"22159"	"22159"	"22138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.3"	""	"214.3"	""	"240.4"	""	"320.1"	""	"363.6"	"374.1"	""	"1080"	"62"	"37.000"	"30.000"	"3.54318443803569E-05"	""	"0"	"2.803E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPWFVSDVTVR"	"[K].iIPWFVSDVTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"830.98456"	"1660.96184"	"1660.96239"	"-0.33"	"-0.00028"	"4/94"	"4"	"94"	"235169.17767334"	"HCD"	"MS2"	"7.224589"	"10.1"	"100.000"	"83.7784"	"28637"	"28637"	"28615"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.6"	""	"14.1"	""	"14.2"	""	"17.2"	""	"19.6"	"18.6"	""	"941"	"15"	"36.000"	"29.000"	"1.63139688137916"	"16"	"0.001389"	"0.01918"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPWFVSDVTVR"	"[K].iIPWFVSDVTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"830.98492"	"1660.96257"	"1660.96239"	"0.11"	"0.00009"	"8/94"	"8"	"94"	"222849.583496094"	"HCD"	"MS2"	"12.468"	"10.7"	"100.000"	"83.7765"	"28585"	"28585"	"28565"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.6"	""	"11.7"	""	"21.8"	""	"16.8"	""	"16.7"	"21.8"	""	"934"	"23"	"36.000"	"29.000"	"0.22198155051529"	"16"	"0.000523"	"0.002915"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVEFPFLVR"	"[R].iLQAVEFPFLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"554.33728"	"1660.99729"	"1660.99878"	"-0.90"	"-0.00050"	"14/106"	"14"	"106"	"1271528.59429932"	"HCD"	"MS2"	"3.77619"	"6.4"	"100.000"	"88.5871"	"30552"	"30552"	"30538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.2"	""	"12.5"	""	"5.9"	""	"11.7"	""	"10.7"	"11.9"	""	"635"	"50"	"35.000"	"28.000"	"0.000352163003845812"	""	"0"	"1.476E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVEFPFLVR"	"[R].iLQAVEFPFLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"831.00244"	"1660.99761"	"1660.99878"	"-0.71"	"-0.00059"	"5/106"	"5"	"106"	"115195.840148926"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"88.8136"	"30639"	"30639"	"30629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"11.0"	""	"12.3"	""	"12.2"	""	"14.2"	"11.1"	""	"630"	"21"	"34.000"	"27.000"	"0.260201954116811"	"22"	"0.0008731"	"0.009087"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVEFPFLVR"	"[R].iLQAVEFPFLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"554.33740"	"1660.99765"	"1660.99878"	"-0.68"	"-0.00038"	"13/106"	"13"	"106"	"339609.703796387"	"HCD"	"MS2"	"7.044333"	"3.9"	"100.000"	"88.2901"	"30437"	"30437"	"30431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.5"	""	"5.9"	""	"6.9"	""	"5.4"	""	"6.7"	"6.9"	""	"630"	"38"	"34.000"	"27.000"	"0.00544892153152757"	"26"	"0"	"6.305E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVEFPFLVR"	"[R].iLQAVEFPFLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"3"	"3"	"0.6444"	"0.0000"	"1"	"1"	"1"	"554.33746"	"1660.99784"	"1660.99878"	"-0.57"	"-0.00031"	"14/106"	"14"	"106"	"1081060.53265381"	"HCD"	"MS2"	"1.496507"	"7.3"	"100.000"	"88.4841"	"30471"	"30471"	"30455"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.0"	""	"9.3"	""	"13.2"	""	"11.9"	""	"11.4"	"14.7"	""	"630"	"45"	"34.000"	"27.000"	"0.000951284791926634"	""	"0"	"3.302E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVEFPFLVR"	"[R].iLQAVEFPFLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"831.00262"	"1660.99797"	"1660.99878"	"-0.49"	"-0.00040"	"7/106"	"7"	"106"	"132051.894470215"	"HCD"	"MS2"	"16.71363"	"6.6"	"100.000"	"88.2556"	"30425"	"30425"	"30418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"10.6"	""	"10.4"	""	"12.1"	""	"9.2"	"12.9"	""	"637"	"34"	"35.000"	"28.000"	"0.0130650006801234"	"27"	"7.476E-05"	"0.0001869"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVEFPFLVR"	"[R].iLQAVEFPFLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.7414"	"0.0000"	"1"	"1"	"1"	"831.00275"	"1660.99822"	"1660.99878"	"-0.34"	"-0.00028"	"7/106"	"7"	"106"	"1408542.11029053"	"HCD"	"MS2"	"0"	"57.6"	"100.000"	"88.5338"	"30530"	"30530"	"30517"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.8"	""	"83.3"	""	"85.5"	""	"112.5"	"1.8"	"93.7"	"103.5"	""	"656"	"58"	"35.000"	"28.000"	"4.98739589752259E-05"	""	"0"	"2.181E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVEFPFLVR"	"[R].iLQAVEFPFLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"3"	"3"	"0.3810"	"0.0000"	"1"	"1"	"1"	"554.33765"	"1660.99839"	"1660.99878"	"-0.24"	"-0.00013"	"11/106"	"11"	"106"	"541784.205078125"	"HCD"	"MS2"	"14.66389"	"5.6"	"100.000"	"88.2057"	"30362"	"30362"	"30355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"7.6"	""	"7.6"	""	"9.5"	""	"8.6"	"14.2"	""	"656"	"42"	"35.000"	"28.000"	"0.00203176672625185"	""	"0"	"3.953E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVEFPFLVR"	"[R].iLQAVEFPFLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"831.00299"	"1660.99870"	"1660.99878"	"-0.04"	"-0.00004"	"7/106"	"7"	"106"	"189304.243225098"	"HCD"	"MS2"	"17.84384"	"9.4"	"100.000"	"88.1617"	"30345"	"30345"	"30338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.3"	""	"12.0"	""	"13.2"	""	"17.5"	""	"16.2"	"17.8"	""	"656"	"38"	"35.000"	"28.000"	"0.00529509606639088"	"28"	"0.0001308"	"0.0002086"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVEFPFLVR"	"[R].iLQAVEFPFLVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"831.00348"	"1660.99968"	"1660.99878"	"0.54"	"0.00045"	"11/106"	"11"	"106"	"1203560.70843506"	"HCD"	"MS2"	"0"	"51.5"	"100.000"	"88.4516"	"30457"	"30457"	"30449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.6"	""	"76.7"	""	"71.8"	""	"93.6"	"0.2"	"77.8"	"102.1"	""	"648"	"56"	"35.000"	"28.000"	"7.98996745263926E-05"	""	"0"	"1.664E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEILAANAIPK"	"[R].yEILAANAIPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"831.00391"	"1661.00054"	"1661.00381"	"-1.97"	"-0.00164"	"9/88"	"9"	"88"	"1307075.79443359"	"HCD"	"MS2"	"0"	"88.0"	"100.000"	"55.8474"	"17208"	"17208"	"17179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.4"	""	"69.0"	""	"72.9"	""	"209.9"	"3.0"	"242.2"	"174.5"	""	"648"	"51"	"35.000"	"28.000"	"0.000265182591355672"	"19"	"0"	"3.488E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEILAANAIPK"	"[R].yEILAANAIPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.00482"	"1661.00237"	"1661.00381"	"-0.87"	"-0.00072"	"8/88"	"8"	"88"	"1262400.65466309"	"HCD"	"MS2"	"13.45293"	"78.4"	"100.000"	"56.0512"	"17345"	"17345"	"17317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.3"	""	"65.7"	""	"65.9"	""	"181.9"	""	"226.0"	"159.2"	""	"627"	"36"	"34.000"	"27.000"	"0.00773103332222965"	"15"	"0.0001308"	"0.0002252"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIPDAVNYIK"	"[R].lGIPDAVNYIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"831.00543"	"1661.00359"	"1661.00381"	"-0.14"	"-0.00011"	"9/86"	"9"	"86"	"1123491.89343262"	"HCD"	"MS2"	"0"	"78.1"	"100.000"	"63.3398"	"20317"	"20317"	"20291"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.7"	""	"98.7"	""	"121.1"	""	"117.6"	"0.4"	"135.8"	"151.2"	""	"628"	"58"	"34.000"	"27.000"	"4.93093920560736E-05"	"22"	"0"	"1.163E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIPDAVNYIK"	"[R].lGIPDAVNYIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"831.00635"	"1661.00542"	"1661.00381"	"0.97"	"0.00080"	"9/86"	"9"	"86"	"876955.545349121"	"HCD"	"MS2"	"5.709394"	"69.0"	"100.000"	"63.3253"	"20258"	"20258"	"20233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.2"	""	"91.5"	""	"100.0"	""	"102.2"	"0.7"	"127.6"	"134.8"	""	"611"	"59"	"34.000"	"27.000"	"4.26590534302589E-05"	"22"	"0"	"0.0001639"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATADNLIK"	"[R].kATADNLIk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.35632"	"1661.05442"	"1661.05647"	"-1.23"	"-0.00068"	"8/84"	"8"	"84"	"7592213.68878174"	"HCD"	"MS2"	"59.07985"	"520.0"	"100.000"	"33.3532"	"8101"	"8101"	"8089"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"785.2"	""	"658.3"	""	"759.5"	""	"821.1"	""	"936.9"	"972.4"	""	"296"	"9"	"31.000"	"24.000"	"1.97361171960172"	"13"	"0.0001889"	"0.0005025"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.63269"	"1661.88352"	"1661.88675"	"-1.95"	"-0.00108"	"13/100"	"13"	"100"	"4396769.953125"	"HCD"	"MS2"	"0"	"96.2"	"100.000"	"23.7309"	"4182"	"4182"	"4154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.6"	""	"150.7"	""	"154.2"	""	"135.8"	""	"168.1"	"170.9"	""	"1039"	"31"	"37.000"	"30.000"	"0.0381579954507621"	"14"	"0"	"0.0001338"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.63293"	"1661.88425"	"1661.88675"	"-1.51"	"-0.00083"	"11/100"	"11"	"100"	"652587.62487793"	"HCD"	"MS2"	"53.41774"	"44.9"	"100.000"	"24.7793"	"4609"	"4609"	"4581"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.9"	""	"61.8"	""	"65.1"	""	"58.5"	"0.2"	"79.4"	"81.5"	""	"1062"	"20"	"37.000"	"30.000"	"0.576892006140662"	"14"	"0.0001889"	"0.0007452"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9783"	"0.0000"	"1"	"1"	"1"	"554.63293"	"1661.88425"	"1661.88675"	"-1.51"	"-0.00083"	"13/100"	"13"	"100"	"5498143.15362549"	"HCD"	"MS2"	"49.40666"	"112.6"	"100.000"	"23.7552"	"4225"	"4225"	"4197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.5"	"3.0"	"170.3"	""	"173.2"	""	"173.1"	"1.1"	"180.4"	"200.3"	""	"1062"	"46"	"37.000"	"30.000"	"0.00131854367891195"	"17"	"0"	"4.521E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.63330"	"1661.88535"	"1661.88675"	"-0.84"	"-0.00047"	"14/100"	"14"	"100"	"1148251.96331787"	"HCD"	"MS2"	"30.26976"	"57.7"	"100.000"	"24.2837"	"4407"	"4407"	"4390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.6"	""	"89.8"	""	"81.5"	""	"77.9"	"1.9"	"106.2"	"95.6"	""	"1062"	"29"	"37.000"	"30.000"	"0.0616729213949222"	"14"	"0.0001889"	"0.000526"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.63403"	"1661.88755"	"1661.88675"	"0.48"	"0.00026"	"13/100"	"13"	"100"	"942618.879394531"	"HCD"	"MS2"	"0"	"50.8"	"100.000"	"24.3176"	"4455"	"4455"	"4429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.7"	""	"74.6"	""	"73.0"	""	"73.5"	"1.0"	"101.5"	"83.4"	""	"1068"	"26"	"37.000"	"30.000"	"0.149121841122074"	"14"	"0.0003839"	"0.00198"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLPLMVFANWR"	"[R].eGLPLMVFANWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.45593"	"1661.90459"	"1661.90350"	"0.66"	"0.00054"	"5/92"	"5"	"92"	"153192.126953125"	"HCD"	"MS2"	"46.06608"	"8.1"	"100.000"	"83.2239"	"28360"	"28360"	"28335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.4"	""	"6.9"	""	"14.0"	""	"10.8"	""	"15.4"	"15.3"	""	"1120"	"1"	"37.000"	"30.000"	"41.1327766167983"	"13"	"0.002829"	"0.0464"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGQGAGALVHSE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"3"	"554.95258"	"1662.84317"	"1662.84374"	"-0.34"	"-0.00019"	"8/114"	"8"	"114"	"5349165.1473999"	"HCD"	"MS2"	"85.44628"	"178.3"	"100.000"	"49.4386"	"14618"	"14618"	"14591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"258.5"	"2.6"	"267.2"	""	"280.9"	""	"276.7"	"0.2"	"304.5"	"296.6"	""	"824"	"4"	"36.000"	"29.000"	"16.3266550113241"	"15"	"0.0001889"	"0.0009667"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGQGAGALVHSE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"831.92548"	"1662.84368"	"1662.84374"	"-0.04"	"-0.00003"	"12/114"	"12"	"114"	"2559868.10656738"	"HCD"	"MS2"	"27.54286"	"110.6"	"100.000"	"49.4064"	"14605"	"14605"	"14575"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.3"	""	"145.3"	""	"132.2"	""	"185.3"	"2.9"	"226.2"	"211.2"	""	"822"	"44"	"36.000"	"29.000"	"0.00171728280691762"	"19"	"0"	"7.395E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGQGAGALVHSE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"831.92590"	"1662.84453"	"1662.84374"	"0.48"	"0.00040"	"12/114"	"12"	"114"	"2440623.09124756"	"HCD"	"MS2"	"26.93193"	"104.6"	"100.000"	"49.6803"	"14760"	"14760"	"14734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.1"	""	"137.2"	""	"122.6"	""	"179.3"	""	"214.8"	"194.4"	""	"820"	"49"	"36.000"	"29.000"	"0.000575153618870403"	"22"	"0"	"9.878E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLEEFAWLER"	"[R].qLLEEFAWLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"554.97266"	"1662.90342"	"1662.90527"	"-1.12"	"-0.00062"	"15/112"	"15"	"112"	"797976.171203613"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"82.0240"	"27871"	"27871"	"27840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.3"	""	"7.2"	""	"11.7"	""	"16.6"	""	"21.5"	"22.1"	""	"1125"	"66"	"37.000"	"30.000"	"1.55999255886666E-05"	"28"	"0"	"7.671E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLEEFAWLER"	"[R].qLLEEFAWLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"831.95599"	"1662.90471"	"1662.90527"	"-0.34"	"-0.00028"	"5/112"	"5"	"112"	"499297.611999512"	"HCD"	"MS2"	"52.84909"	"32.0"	"100.000"	"81.9893"	"27907"	"27907"	"27886"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.3"	""	"26.4"	""	"30.7"	""	"58.8"	""	"87.4"	"82.0"	""	"1159"	"21"	"37.000"	"30.000"	"0.439595704729412"	"22"	"0.0001859"	"0.00033"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLEEFAWLER"	"[R].qLLEEFAWLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"831.95605"	"1662.90483"	"1662.90527"	"-0.26"	"-0.00022"	"7/112"	"7"	"112"	"742236.531494141"	"HCD"	"MS2"	"29.92702"	"43.7"	"100.000"	"82.0680"	"27889"	"27889"	"27872"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.7"	""	"30.8"	""	"27.4"	""	"87.6"	""	"114.4"	"124.3"	""	"1159"	"49"	"37.000"	"30.000"	"0.000778132294979392"	"21"	"0"	"3.393E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLEEFAWLER"	"[R].qLLEEFAWLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"831.95624"	"1662.90520"	"1662.90527"	"-0.04"	"-0.00004"	"4/112"	"4"	"112"	"153324.74798584"	"HCD"	"MS2"	"21.39251"	"10.8"	"100.000"	"82.3122"	"28039"	"28039"	"28014"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.1"	""	"10.8"	""	"10.1"	""	"15.9"	""	"25.9"	"28.6"	""	"1160"	"7"	"37.000"	"30.000"	"12.5437674376167"	"14"	"0.004323"	"0.1144"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLEEFAWLER"	"[R].qLLEEFAWLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"554.97339"	"1662.90561"	"1662.90527"	"0.20"	"0.00011"	"13/112"	"13"	"112"	"612308.555358887"	"HCD"	"MS2"	"8.098343"	"10.1"	"100.000"	"82.0423"	"27929"	"27929"	"27902"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.5"	""	"9.7"	""	"13.2"	""	"16.9"	""	"23.0"	"22.4"	""	"1151"	"33"	"37.000"	"30.000"	"0.0305523997654934"	"23"	"0"	"6.57E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEYLLMGIPGDR"	"[R].aVEYLLMGIPGDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"554.97369"	"1662.90653"	"1662.90864"	"-1.27"	"-0.00071"	"14/114"	"14"	"114"	"1287449.77331543"	"HCD"	"MS2"	"60.61584"	"20.9"	"100.000"	"73.0786"	"24284"	"24284"	"24255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.2"	""	"26.1"	""	"22.1"	""	"39.4"	"0.7"	"44.9"	"36.9"	""	"1136"	"47"	"37.000"	"30.000"	"0.00105766549362451"	"26"	"0"	"1.959E-05"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFADYEAYVK"	"[K].vFADYEAYVk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"831.96173"	"1662.91619"	"1662.91433"	"1.12"	"0.00093"	"9/76"	"9"	"76"	"781550.312316895"	"HCD"	"MS2"	"0"	"69.0"	"100.000"	"60.0436"	"18971"	"18971"	"18948"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.3"	""	"97.2"	""	"104.4"	""	"106.0"	""	"123.1"	"131.0"	""	"1125"	"60"	"37.000"	"30.000"	"5.70325154476883E-05"	"23"	"0"	"1.52E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFADYEAYVK"	"[K].vFADYEAYVk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.96338"	"1662.91948"	"1662.91433"	"3.10"	"0.00258"	"11/76"	"11"	"76"	"1084489.33642578"	"HCD"	"MS2"	"79.47671"	"99.5"	"100.000"	"59.8114"	"18823"	"18823"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.5"	""	"148.6"	""	"154.9"	""	"128.7"	""	"184.1"	"195.6"	""	"1112"	"6"	"37.000"	"30.000"	"14.1278082428541"	"13"	"0.0003839"	"0.001601"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEFLLHMLK"	"[K].sAEFLLHmLk.[N]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"554.99255"	"1662.96311"	"1662.96532"	"-1.33"	"-0.00074"	"9/76"	"9"	"76"	"2956803.14190674"	"HCD"	"MS2"	"23.19629"	"109.2"	"100.000"	"50.6760"	"15114"	"15114"	"15090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.9"	""	"112.6"	""	"146.9"	""	"290.9"	"1.0"	"198.1"	"179.4"	""	"909"	"26"	"36.000"	"29.000"	"0.119821261485763"	"16"	"0.0001889"	"0.001107"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEFLLHMLK"	"[K].sAEFLLHmLk.[N]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.99402"	"1662.96750"	"1662.96532"	"1.31"	"0.00073"	"6/76"	"6"	"76"	"2705464.84423828"	"HCD"	"MS2"	"5.364521"	"99.7"	"100.000"	"50.9065"	"15258"	"15258"	"15238"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.6"	""	"100.9"	""	"130.0"	""	"265.2"	"3.9"	"188.6"	"173.0"	""	"891"	"17"	"36.000"	"29.000"	"0.825748338231299"	"14"	"0.0003839"	"0.001793"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].lADLPGNYITk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"554.99884"	"1662.98197"	"1662.98308"	"-0.67"	"-0.00037"	"14/102"	"14"	"102"	"37073673.8208008"	"HCD"	"MS2"	"3.435443"	"495.8"	"53.866"	"54.9621"	"16845"	"16845"	"16828"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"925.3"	""	"939.1"	""	"612.8"	""	"783.8"	"0.6"	"705.6"	"711.5"	""	"792"	"35"	"35.000"	"28.000"	"0.0114207647523814"	"17"	"7.476E-05"	"0.0001996"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].lADLPGNYITk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"831.99487"	"1662.98247"	"1662.98308"	"-0.37"	"-0.00030"	"9/102"	"9"	"102"	"1411218.82745361"	"HCD"	"MS2"	"29.71987"	"112.3"	"100.000"	"55.6990"	"17201"	"17201"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.9"	""	"187.7"	""	"150.7"	""	"159.8"	""	"191.0"	"202.5"	""	"775"	"42"	"35.000"	"28.000"	"0.00221958462007009"	"23"	"0.0001308"	"0.0002307"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].lADLPGNYITk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"831.99506"	"1662.98284"	"1662.98308"	"-0.15"	"-0.00012"	"10/102"	"10"	"102"	"7031511.79614258"	"HCD"	"MS2"	"19.35641"	"451.5"	"100.000"	"55.0603"	"16939"	"16939"	"16917"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"842.2"	""	"863.1"	""	"552.6"	""	"731.1"	"6.7"	"640.6"	"624.0"	""	"775"	"78"	"35.000"	"28.000"	"5.78457833711861E-07"	"27"	"0"	"1.996E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].lADLPGNYITk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"554.99921"	"1662.98307"	"1662.98308"	"-0.01"	"0.00000"	"5/102"	"5"	"102"	"22017287.0935059"	"HCD"	"MS2"	"18.8031"	"483.3"	"89.791"	"55.0951"	"16953"	"16953"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"817.8"	""	"920.4"	""	"601.1"	""	"785.4"	"8.0"	"744.2"	"687.8"	""	"775"	"32"	"35.000"	"28.000"	"0.0268084501231088"	"17"	"0.0001308"	"0.0002348"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].lADLPGNYITk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8795"	"0.0000"	"1"	"1"	"1"	"831.99524"	"1662.98320"	"1662.98308"	"0.07"	"0.00006"	"10/102"	"10"	"102"	"18577649.5040283"	"HCD"	"MS2"	"0"	"556.4"	"48.294"	"55.1530"	"16924"	"16924"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1005.6"	""	"1059.8"	""	"672.9"	""	"891.9"	"6.3"	"808.9"	"807.2"	""	"775"	"83"	"35.000"	"28.000"	"1.77121673475764E-07"	"28"	"0"	"1.545E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].lADLPGNYITk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"554.99927"	"1662.98325"	"1662.98308"	"0.10"	"0.00006"	"14/102"	"14"	"102"	"16654523.8745117"	"HCD"	"MS2"	"5.762568"	"276.7"	"71.153"	"55.3980"	"17078"	"17078"	"17061"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"480.5"	""	"502.4"	""	"358.4"	""	"437.3"	"1.0"	"413.0"	"420.8"	""	"775"	"37"	"35.000"	"28.000"	"0.00783919931737831"	"18"	"0"	"0.0001625"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].lADLPGNYITk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8795"	"0.0000"	"1"	"1"	"1"	"831.99554"	"1662.98381"	"1662.98308"	"0.44"	"0.00037"	"10/102"	"10"	"102"	"14293291.9153442"	"HCD"	"MS2"	"0"	"611.2"	"70.417"	"55.3589"	"17062"	"17062"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1115.3"	""	"1170.9"	""	"734.9"	""	"972.1"	"1.1"	"903.2"	"872.1"	""	"768"	"83"	"35.000"	"28.000"	"1.74715415097619E-07"	"28"	"0"	"1.382E-05"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQVLAEFQEK"	"[R].lQVLAEFQEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"3"	"554.99951"	"1662.98398"	"1662.98308"	"0.54"	"0.00030"	"6/94"	"6"	"94"	"2470945.40698242"	"HCD"	"MS2"	"25.32672"	"73.5"	"100.000"	"65.0078"	"20945"	"20945"	"20921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.0"	""	"82.5"	""	"101.8"	""	"137.0"	"1.3"	"142.1"	"145.4"	""	"766"	"3"	"35.000"	"28.000"	"20.6157326703738"	"15"	"0.002953"	"0.05252"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].lADLPGNYITk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"831.99567"	"1662.98406"	"1662.98308"	"0.59"	"0.00049"	"10/102"	"10"	"102"	"5166420.64862061"	"HCD"	"MS2"	"0"	"352.9"	"100.000"	"54.8588"	"16803"	"16803"	"16780"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"650.8"	""	"687.1"	""	"422.6"	""	"592.8"	"1.1"	"494.8"	"480.7"	""	"766"	"80"	"35.000"	"28.000"	"3.49300151473313E-07"	""	"0"	"8.162E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].lADLPGNYITk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"554.99976"	"1662.98471"	"1662.98308"	"0.98"	"0.00055"	"5/102"	"5"	"102"	"8491764.07672119"	"HCD"	"MS2"	"9.333893"	"233.5"	"100.000"	"55.2769"	"16974"	"16974"	"16955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.9"	""	"407.7"	""	"303.6"	""	"374.5"	"5.0"	"390.2"	"361.3"	""	"767"	"27"	"35.000"	"28.000"	"0.0686697345022535"	"16"	"0.0001308"	"0.0002531"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"555.00104"	"1662.98856"	"1662.99047"	"-1.15"	"-0.00064"	"9/86"	"9"	"86"	"422643.215698242"	"HCD"	"MS2"	"25.64412"	"13.9"	"100.000"	"84.5851"	"28915"	"28915"	"28892"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.1"	""	"22.0"	""	"22.5"	""	"21.5"	""	"24.7"	"27.2"	""	"735"	"31"	"35.000"	"28.000"	"0.0307084109199984"	"17"	"0.0002277"	"0.001215"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"555.00122"	"1662.98911"	"1662.99047"	"-0.82"	"-0.00045"	"9/86"	"9"	"86"	"352810.880737305"	"HCD"	"MS2"	"16.34195"	"13.6"	"100.000"	"84.6491"	"28992"	"28992"	"28976"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.1"	""	"17.6"	""	"19.6"	""	"21.6"	""	"25.1"	"30.4"	""	"736"	"33"	"35.000"	"28.000"	"0.0206465655179949"	"15"	"0.0001889"	"0.0009581"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"831.99835"	"1662.98943"	"1662.99047"	"-0.63"	"-0.00052"	"12/86"	"12"	"86"	"579054.208007813"	"HCD"	"MS2"	"22.05198"	"43.4"	"100.000"	"84.0060"	"28730"	"28730"	"28709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.6"	""	"69.9"	""	"69.4"	""	"46.1"	""	"77.1"	"74.5"	""	"736"	"44"	"35.000"	"28.000"	"0.00145830316606002"	"17"	"0"	"0.0001097"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"555.00140"	"1662.98966"	"1662.99047"	"-0.49"	"-0.00027"	"12/86"	"12"	"86"	"5181578.81964111"	"HCD"	"MS2"	"7.498149"	"116.7"	"100.000"	"84.3382"	"28866"	"28866"	"28849"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"190.8"	""	"180.6"	""	"179.6"	""	"103.8"	""	"217.9"	"234.8"	""	"744"	"46"	"35.000"	"28.000"	"0.000838576986920703"	"24"	"7.476E-05"	"0.0001904"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"831.99847"	"1662.98967"	"1662.99047"	"-0.48"	"-0.00040"	"9/86"	"9"	"86"	"3482953.59863281"	"HCD"	"MS2"	"0"	"223.0"	"100.000"	"84.2991"	"28850"	"28850"	"28833"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"377.2"	""	"365.3"	""	"327.6"	""	"203.9"	"4.7"	"414.0"	"419.1"	""	"744"	"64"	"35.000"	"28.000"	"1.61637803391825E-05"	"26"	"0"	"2.073E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"555.00165"	"1662.99039"	"1662.99047"	"-0.05"	"-0.00003"	"11/86"	"11"	"86"	"5531540.03344727"	"HCD"	"MS2"	"5.185182"	"120.9"	"100.000"	"84.2719"	"28787"	"28787"	"28772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.0"	""	"190.5"	""	"186.4"	""	"114.8"	""	"211.6"	"249.4"	""	"742"	"40"	"35.000"	"28.000"	"0.00388484691326884"	"21"	"7.476E-05"	"0.0001863"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.99890"	"1662.99053"	"1662.99047"	"0.03"	"0.00003"	"10/86"	"10"	"86"	"258648.031677246"	"HCD"	"MS2"	"23.18885"	"18.4"	"100.000"	"84.5783"	"28912"	"28912"	"28892"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.7"	""	"30.7"	""	"27.3"	""	"20.5"	""	"32.2"	"36.4"	""	"742"	"9"	"35.000"	"28.000"	"4.80146657177945"	"13"	"0.0003146"	"0.001447"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"555.00171"	"1662.99057"	"1662.99047"	"0.06"	"0.00003"	"9/86"	"9"	"86"	"1509202.59490967"	"HCD"	"MS2"	"4.436932"	"38.1"	"100.000"	"84.0383"	"28743"	"28743"	"28725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.0"	""	"58.2"	""	"59.0"	""	"44.6"	""	"64.7"	"76.2"	""	"743"	"26"	"35.000"	"28.000"	"0.0950514656985447"	"16"	"0.0002277"	"0.001181"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.99908"	"1662.99089"	"1662.99047"	"0.25"	"0.00021"	"11/86"	"11"	"86"	"731158.018676758"	"HCD"	"MS2"	"14.61692"	"57.4"	"100.000"	"83.9767"	"28667"	"28667"	"28644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.5"	""	"94.7"	""	"93.2"	""	"57.3"	""	"102.7"	"105.7"	""	"743"	"25"	"35.000"	"28.000"	"0.125880604005714"	"14"	"0.0001889"	"0.000484"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"831.99908"	"1662.99089"	"1662.99047"	"0.25"	"0.00021"	"9/86"	"9"	"86"	"3269200.609375"	"HCD"	"MS2"	"1.609932"	"209.8"	"100.000"	"84.2675"	"28786"	"28786"	"28772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"356.3"	""	"333.0"	""	"315.9"	""	"200.0"	"2.2"	"370.3"	"408.3"	""	"743"	"66"	"35.000"	"28.000"	"9.11924362176989E-06"	"28"	"0"	"3.202E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.99939"	"1662.99150"	"1662.99047"	"0.62"	"0.00052"	"10/86"	"10"	"86"	"277422.667907715"	"HCD"	"MS2"	"8.250695"	"17.8"	"100.000"	"84.6099"	"28977"	"28977"	"28960"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.3"	""	"23.6"	""	"24.8"	""	"16.5"	"1.2"	"37.9"	"36.5"	""	"750"	"18"	"35.000"	"28.000"	"0.55338994997846"	"14"	"0.0003839"	"0.001798"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDMIVPILEk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"555.00226"	"1662.99222"	"1662.99047"	"1.05"	"0.00058"	"12/86"	"12"	"86"	"1383418.73242188"	"HCD"	"MS2"	"13.36338"	"37.2"	"100.000"	"83.9836"	"28670"	"28670"	"28644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.5"	""	"51.0"	""	"53.0"	""	"43.1"	""	"68.3"	"79.5"	""	"750"	"40"	"35.000"	"28.000"	"0.00353208598696066"	"22"	"0.0001889"	"0.0003767"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSVQTLLTK"	"[R].dLSSVQTLLTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"832.00549"	"1663.00371"	"1663.00421"	"-0.30"	"-0.00025"	"10/108"	"10"	"108"	"3089493.53289795"	"HCD"	"MS2"	"8.533566"	"216.4"	"100.000"	"62.8819"	"20130"	"20130"	"20099"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.9"	""	"271.0"	""	"231.7"	""	"307.2"	""	"404.5"	"535.9"	""	"647"	"86"	"35.000"	"28.000"	"8.60744556844915E-08"	"22"	"0"	"8.366E-06"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSVQTLLTK"	"[R].dLSSVQTLLTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9341"	"0.0000"	"1"	"1"	"1"	"832.00616"	"1663.00505"	"1663.00421"	"0.51"	"0.00042"	"10/108"	"10"	"108"	"1341482.20684814"	"HCD"	"MS2"	"0"	"113.3"	"100.000"	"63.0792"	"20157"	"20157"	"20137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.1"	""	"152.6"	""	"132.3"	""	"163.0"	"0.4"	"228.9"	"248.5"	""	"646"	"91"	"35.000"	"28.000"	"2.56568019815943E-08"	"24"	"0"	"4.647E-06"	"1.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSVQTLLTK"	"[R].dLSSVQTLLTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"832.00616"	"1663.00505"	"1663.00421"	"0.51"	"0.00042"	"10/108"	"10"	"108"	"2341461.21343994"	"HCD"	"MS2"	"0"	"170.5"	"100.000"	"62.7728"	"20032"	"20032"	"20009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.3"	""	"198.8"	""	"187.1"	""	"250.8"	"2.9"	"326.0"	"422.9"	""	"646"	"86"	"35.000"	"28.000"	"8.45673111654733E-08"	"22"	"0"	"4.329E-06"	"1.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSVQTLLTK"	"[R].dLSSVQTLLTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6780"	"0.0000"	"1"	"1"	"1"	"832.00635"	"1663.00542"	"1663.00421"	"0.73"	"0.00061"	"10/108"	"10"	"108"	"1144223.41894531"	"HCD"	"MS2"	"0"	"97.8"	"100.000"	"63.2154"	"20266"	"20266"	"20243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.2"	""	"168.4"	""	"112.0"	""	"161.6"	""	"161.1"	"183.9"	""	"646"	"59"	"35.000"	"28.000"	"4.317203518445E-05"	""	"0"	"1.482E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPDTLLLEK"	"[R].yLPDTLLLEk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"0"	"3"	"3"	"0.5806"	"0.0000"	"1"	"1"	"1"	"555.00726"	"1663.00724"	"1663.00823"	"-0.60"	"-0.00033"	"9/82"	"9"	"82"	"4611118.01367188"	"HCD"	"MS2"	"15.22499"	"134.6"	"100.000"	"68.4691"	"22350"	"22350"	"22330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"213.3"	""	"178.8"	""	"172.6"	""	"232.1"	""	"234.5"	"244.6"	""	"625"	"31"	"34.000"	"27.000"	"0.025052439480865"	"27"	"0"	"0.0001123"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPDTLLLEK"	"[R].yLPDTLLLEk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"555.00739"	"1663.00760"	"1663.00823"	"-0.38"	"-0.00021"	"9/82"	"9"	"82"	"6507549.78430176"	"HCD"	"MS2"	"10.26309"	"170.3"	"100.000"	"68.3523"	"22354"	"22354"	"22330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"271.3"	""	"222.1"	""	"245.7"	""	"281.1"	""	"279.9"	"314.2"	""	"575"	"28"	"34.000"	"27.000"	"0.0497322203274342"	"26"	"0"	"0.0001705"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IITGNALFIDK"	"[K].iITGNALFIDk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"832.01263"	"1663.01799"	"1663.01946"	"-0.89"	"-0.00074"	"13/106"	"13"	"106"	"480555.766723633"	"HCD"	"MS2"	"10.13961"	"44.2"	"100.000"	"64.0544"	"20609"	"20609"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.1"	""	"70.6"	""	"64.7"	""	"78.9"	"1.4"	"61.1"	"74.8"	""	"526"	"34"	"34.000"	"27.000"	"0.010470218585557"	"19"	"0"	"0.0001582"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVDNTTAK"	"[K].kVVDNTTAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.01630"	"1663.03434"	"1663.03573"	"-0.84"	"-0.00047"	"7/86"	"7"	"86"	"2764721.80499268"	"HCD"	"MS2"	"0"	"201.4"	"100.000"	"27.3253"	"5640"	"5640"	"5613"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"304.9"	""	"293.5"	""	"292.2"	""	"323.1"	""	"352.8"	"344.5"	""	"381"	"36"	"32.000"	"25.000"	"0.00427459506480617"	"15"	"0"	"0.0001296"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVDNTTAK"	"[K].kVVDNTTAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"1"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"555.01660"	"1663.03525"	"1663.03573"	"-0.29"	"-0.00016"	"7/86"	"7"	"86"	"2641495.7399292"	"HCD"	"MS2"	"9.490373"	"196.7"	"100.000"	"27.4069"	"5708"	"5708"	"5682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.4"	""	"284.9"	""	"272.8"	""	"310.4"	""	"364.6"	"338.6"	""	"372"	"36"	"32.000"	"25.000"	"0.00438039166804658"	"17"	"0"	"6.934E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPAWADTSILSR"	"[R].aFPAWADTSILSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"555.30377"	"1663.89676"	"1663.90052"	"-2.26"	"-0.00125"	"10/106"	"10"	"106"	"2320672.09185791"	"HCD"	"MS2"	"36.688"	"21.2"	"100.000"	"66.9477"	"21790"	"21790"	"21763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.9"	""	"27.4"	""	"32.0"	""	"32.5"	""	"39.0"	"44.7"	""	"1105"	"25"	"37.000"	"30.000"	"0.165322621172602"	"18"	"0"	"0.0001427"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPAWADTSILSR"	"[R].aFPAWADTSILSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.45227"	"1663.89726"	"1663.90052"	"-1.96"	"-0.00163"	"12/106"	"12"	"106"	"922948.482849121"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"67.0404"	"21775"	"21775"	"21753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.2"	""	"63.3"	""	"63.7"	""	"68.9"	"1.7"	"74.9"	"86.4"	""	"1105"	"48"	"37.000"	"30.000"	"0.000828575871615061"	"16"	"0"	"4.012E-06"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDGATWADVFR"	"[R].lALDGATWADVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQW8"	"Putative phospholipase B-like 2 OS=Rattus norvegicus OX=10116 GN=Plbd2 PE=1 SV=2"	"Q4QQW8"	"Putative phospholipase B-like 2 OS=Rattus norvegicus OX=10116 GN=Plbd2 PE=1 SV=2"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"555.30396"	"1663.89731"	"1663.90052"	"-1.93"	"-0.00107"	"14/108"	"14"	"108"	"403959.453918457"	"HCD"	"MS2"	"47.03794"	"11.5"	"100.000"	"78.8707"	"26636"	"26636"	"26607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.1"	""	"13.3"	""	"18.7"	""	"21.9"	""	"20.6"	"22.9"	""	"1105"	"53"	"37.000"	"30.000"	"0.000269980428536915"	"20"	"0"	"4.016E-05"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDGATWADVFR"	"[R].lALDGATWADVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQW8"	"Putative phospholipase B-like 2 OS=Rattus norvegicus OX=10116 GN=Plbd2 PE=1 SV=2"	"Q4QQW8"	"Putative phospholipase B-like 2 OS=Rattus norvegicus OX=10116 GN=Plbd2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.30432"	"1663.89841"	"1663.90052"	"-1.27"	"-0.00070"	"12/108"	"12"	"108"	"347145.613830566"	"HCD"	"MS2"	"61.35411"	"10.1"	"100.000"	"78.8875"	"26592"	"26592"	"26561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.7"	""	"11.3"	""	"14.0"	""	"15.5"	""	"18.2"	"22.4"	""	"1072"	"49"	"37.000"	"30.000"	"0.000621104662899148"	"16"	"0"	"2.364E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPAWADTSILSR"	"[R].aFPAWADTSILSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"555.30463"	"1663.89933"	"1663.90052"	"-0.72"	"-0.00040"	"9/106"	"9"	"106"	"6353269.76898193"	"HCD"	"MS2"	"1.848642"	"33.3"	"100.000"	"66.7205"	"21644"	"21644"	"21625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.7"	""	"37.3"	""	"47.9"	""	"62.4"	"0.0"	"55.6"	"63.3"	""	"1077"	"75"	"37.000"	"30.000"	"1.5638161994291E-06"	"27"	"0"	"2.587E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDGATWADVFR"	"[R].lALDGATWADVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQW8"	"Putative phospholipase B-like 2 OS=Rattus norvegicus OX=10116 GN=Plbd2 PE=1 SV=2"	"Q4QQW8"	"Putative phospholipase B-like 2 OS=Rattus norvegicus OX=10116 GN=Plbd2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.45331"	"1663.89934"	"1663.90052"	"-0.71"	"-0.00059"	"8/108"	"8"	"108"	"380042.47088623"	"HCD"	"MS2"	"15.33734"	"22.8"	"100.000"	"78.8278"	"26567"	"26567"	"26545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"33.0"	""	"36.7"	""	"36.8"	""	"37.8"	"40.8"	""	"1077"	"37"	"37.000"	"30.000"	"0.0119175150112264"	"15"	"0"	"0.0001417"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPAWADTSILSR"	"[R].aFPAWADTSILSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9571"	"0.0000"	"1"	"1"	"1"	"832.45337"	"1663.89946"	"1663.90052"	"-0.64"	"-0.00053"	"11/106"	"11"	"106"	"4134501.480896"	"HCD"	"MS2"	"2.960775"	"146.0"	"100.000"	"66.6093"	"21652"	"21652"	"21635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"215.2"	""	"210.7"	""	"229.1"	""	"217.5"	"0.9"	"241.1"	"266.9"	""	"1077"	"70"	"37.000"	"30.000"	"5.37261484368444E-06"	"20"	"0"	"1.076E-06"	"1.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPAWADTSILSR"	"[R].aFPAWADTSILSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8429"	"0.0000"	"1"	"1"	"1"	"555.30469"	"1663.89951"	"1663.90052"	"-0.61"	"-0.00034"	"9/106"	"9"	"106"	"7401781.25134277"	"HCD"	"MS2"	"0"	"41.2"	"100.000"	"66.6277"	"21659"	"21659"	"21635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.3"	""	"49.6"	""	"57.5"	""	"65.2"	""	"70.2"	"78.6"	""	"1077"	"70"	"37.000"	"30.000"	"5.27455357142584E-06"	"28"	"0"	"1.331E-05"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDGATWADVFR"	"[R].lALDGATWADVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQW8"	"Putative phospholipase B-like 2 OS=Rattus norvegicus OX=10116 GN=Plbd2 PE=1 SV=2"	"Q4QQW8"	"Putative phospholipase B-like 2 OS=Rattus norvegicus OX=10116 GN=Plbd2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.45386"	"1663.90044"	"1663.90052"	"-0.05"	"-0.00004"	"14/108"	"14"	"108"	"436905.34197998"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"78.7854"	"26601"	"26601"	"26575"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.8"	""	"32.3"	""	"37.9"	""	"38.9"	""	"40.5"	"51.2"	""	"1108"	"23"	"37.000"	"30.000"	"0.298201459514024"	"14"	"0.0001308"	"0.000301"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPAWADTSILSR"	"[R].aFPAWADTSILSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9265"	"0.0000"	"1"	"1"	"1"	"832.45453"	"1663.90178"	"1663.90052"	"0.76"	"0.00063"	"11/106"	"11"	"106"	"2971965.63452148"	"HCD"	"MS2"	"10.12884"	"113.0"	"100.000"	"66.6840"	"21629"	"21629"	"21609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.8"	""	"164.1"	""	"175.4"	""	"183.4"	"1.3"	"182.8"	"199.3"	""	"1109"	"68"	"37.000"	"30.000"	"7.9414819014718E-06"	"22"	"0"	"8.295E-07"	"1.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPAWADTSILSR"	"[R].aFPAWADTSILSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"832.45465"	"1663.90203"	"1663.90052"	"0.90"	"0.00075"	"12/106"	"12"	"106"	"1139822.75042725"	"HCD"	"MS2"	"30.37525"	"55.4"	"100.000"	"66.9409"	"21787"	"21787"	"21763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.3"	""	"70.7"	""	"80.9"	""	"94.1"	"1.1"	"108.7"	"95.0"	""	"1109"	"38"	"37.000"	"30.000"	"0.00880849172097468"	"21"	"0"	"2.923E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDASWYLPK"	"[K].lLDASWYLPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"555.33179"	"1663.98081"	"1663.98235"	"-0.93"	"-0.00051"	"9/76"	"9"	"76"	"1029197.35021973"	"HCD"	"MS2"	"16.07491"	"28.3"	"100.000"	"74.8337"	"25000"	"25000"	"24975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.0"	""	"41.7"	""	"37.7"	""	"47.9"	""	"53.0"	"53.1"	""	"738"	"31"	"35.000"	"28.000"	"0.0281855404140168"	"17"	"0.0001889"	"0.0008358"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDASWYLPK"	"[K].lLDASWYLPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.6591"	"0.0000"	"1"	"1"	"1"	"555.33179"	"1663.98081"	"1663.98235"	"-0.93"	"-0.00051"	"6/76"	"6"	"76"	"8922079.07165527"	"HCD"	"MS2"	"3.435276"	"175.0"	"100.000"	"74.4992"	"24864"	"24864"	"24847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"285.3"	""	"266.1"	"2.2"	"271.2"	""	"273.1"	"1.1"	"267.1"	"287.8"	""	"738"	"44"	"35.000"	"28.000"	"0.00140289887242287"	""	"0.0001308"	"0.0002162"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDASWYLPK"	"[K].lLDASWYLPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"555.33191"	"1663.98117"	"1663.98235"	"-0.71"	"-0.00039"	"6/76"	"6"	"76"	"917985.719665527"	"HCD"	"MS2"	"4.862628"	"29.5"	"100.000"	"74.8501"	"24955"	"24955"	"24929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.6"	""	"33.7"	""	"41.4"	""	"50.2"	""	"52.3"	"62.8"	""	"738"	"32"	"35.000"	"28.000"	"0.0243235167345155"	"18"	"0.0001889"	"0.0006431"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDASWYLPK"	"[K].lLDASWYLPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"555.33228"	"1663.98227"	"1663.98235"	"-0.05"	"-0.00003"	"6/76"	"6"	"76"	"8363780.43505859"	"HCD"	"MS2"	"3.268485"	"163.9"	"100.000"	"74.5134"	"24818"	"24818"	"24801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.6"	""	"250.5"	""	"271.5"	""	"237.7"	""	"244.9"	"288.1"	""	"747"	"39"	"35.000"	"28.000"	"0.00474559428295391"	"24"	"0.0001859"	"0.0003198"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDASWYLPK"	"[K].lLDASWYLPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"832.49512"	"1663.98296"	"1663.98235"	"0.37"	"0.00030"	"8/76"	"8"	"76"	"2739435.82122803"	"HCD"	"MS2"	"6.252969"	"174.0"	"100.000"	"74.4667"	"24850"	"24850"	"24831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"297.4"	""	"248.9"	""	"280.8"	""	"266.7"	""	"260.5"	"290.6"	""	"741"	"49"	"35.000"	"28.000"	"0.000489540032466126"	""	"0"	"8.28E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDASWYLPK"	"[K].lLDASWYLPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"832.49530"	"1663.98332"	"1663.98235"	"0.59"	"0.00049"	"8/76"	"8"	"76"	"590889.863342285"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"74.7582"	"24917"	"24917"	"24897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.8"	""	"64.0"	""	"77.4"	""	"74.7"	""	"74.2"	"74.5"	""	"737"	"53"	"35.000"	"28.000"	"0.000193837362664975"	"20"	"0"	"0.0001203"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDASWYLPK"	"[K].lLDASWYLPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"832.49536"	"1663.98345"	"1663.98235"	"0.66"	"0.00055"	"8/76"	"8"	"76"	"2205326.8505249"	"HCD"	"MS2"	"6.450558"	"145.5"	"100.000"	"74.4350"	"24786"	"24786"	"24769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.0"	""	"229.2"	""	"225.0"	""	"217.5"	""	"234.8"	"241.7"	""	"733"	"48"	"35.000"	"28.000"	"0.000576864719826869"	"27"	"0"	"5.697E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEMYVLNPVK"	"[K].lEMYVLNPVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"832.49609"	"1663.98491"	"1663.98572"	"-0.49"	"-0.00041"	"7/78"	"7"	"78"	"652645.964172363"	"HCD"	"MS2"	"26.26519"	"54.0"	"100.000"	"64.2135"	"20674"	"20674"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.8"	""	"82.0"	""	"82.6"	""	"82.4"	"1.4"	"91.1"	"92.4"	""	"741"	"30"	"35.000"	"28.000"	"0.0356277349141148"	"21"	"7.476E-05"	"0.0001864"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEMYVLNPVK"	"[K].lEMYVLNPVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"832.49615"	"1663.98503"	"1663.98572"	"-0.41"	"-0.00034"	"7/78"	"7"	"78"	"609837.400512695"	"HCD"	"MS2"	"15.54556"	"49.5"	"100.000"	"64.2014"	"20616"	"20616"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.9"	""	"70.6"	""	"73.8"	""	"78.5"	""	"90.2"	"87.6"	""	"741"	"30"	"35.000"	"28.000"	"0.0340242226997167"	"22"	"7.476E-05"	"0.0001845"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQAGSEVSALLGR"	"[R].fTQAGSEVSALLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"832.96149"	"1664.91570"	"1664.91690"	"-0.72"	"-0.00060"	"12/140"	"12"	"140"	"2552948.01293945"	"HCD"	"MS2"	"0"	"119.1"	"100.000"	"61.3763"	"19462"	"19462"	"19433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.6"	""	"155.3"	""	"154.8"	""	"218.4"	"1.9"	"227.8"	"236.0"	""	"1064"	"80"	"37.000"	"30.000"	"5.17501523049345E-07"	"22"	"0"	"3.142E-07"	"1.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQAGSEVSALLGR"	"[R].fTQAGSEVSALLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"555.64349"	"1664.91593"	"1664.91690"	"-0.58"	"-0.00032"	"16/140"	"16"	"140"	"5810054.60467529"	"HCD"	"MS2"	"21.52558"	"84.2"	"100.000"	"61.5420"	"19583"	"19583"	"19555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.3"	""	"108.3"	""	"121.5"	""	"139.7"	"0.1"	"167.5"	"168.5"	""	"1064"	"69"	"37.000"	"30.000"	"6.83772503090004E-06"	"23"	"0"	"5.299E-06"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQAGSEVSALLGR"	"[R].fTQAGSEVSALLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9324"	"0.0000"	"1"	"1"	"1"	"832.96179"	"1664.91631"	"1664.91690"	"-0.36"	"-0.00030"	"13/140"	"13"	"140"	"1398854.69555664"	"HCD"	"MS2"	"0"	"75.4"	"100.000"	"61.7891"	"19684"	"19684"	"19667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.7"	""	"98.3"	""	"105.2"	""	"131.8"	"1.3"	"145.0"	"143.9"	""	"1055"	"74"	"37.000"	"30.000"	"1.99169330713157E-06"	"22"	"0"	"6.712E-07"	"1.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQAGSEVSALLGR"	"[R].fTQAGSEVSALLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9016"	"0.0000"	"1"	"1"	"1"	"555.64386"	"1664.91703"	"1664.91690"	"0.08"	"0.00004"	"13/140"	"13"	"140"	"1439758.89154053"	"HCD"	"MS2"	"35.42705"	"49.1"	"100.000"	"61.7177"	"19601"	"19601"	"19577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.6"	""	"69.3"	""	"69.2"	""	"75.5"	"2.6"	"87.9"	"93.8"	""	"1054"	"61"	"37.000"	"30.000"	"3.92473750248456E-05"	"22"	"0"	"9.564E-06"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQAGSEVSALLGR"	"[R].fTQAGSEVSALLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9467"	"0.0000"	"1"	"1"	"1"	"832.96222"	"1664.91716"	"1664.91690"	"0.16"	"0.00013"	"13/140"	"13"	"140"	"904068.473876953"	"HCD"	"MS2"	"0"	"55.6"	"100.000"	"61.6695"	"19581"	"19581"	"19561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.5"	""	"73.9"	""	"77.5"	""	"96.3"	"0.4"	"101.4"	"115.2"	""	"1029"	"75"	"37.000"	"30.000"	"1.76354026178148E-06"	"22"	"0"	"4.298E-07"	"1.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQAGSEVSALLGR"	"[R].fTQAGSEVSALLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"555.64398"	"1664.91739"	"1664.91690"	"0.30"	"0.00016"	"15/140"	"15"	"140"	"1797264.80566406"	"HCD"	"MS2"	"19.87226"	"58.8"	"100.000"	"61.8467"	"19707"	"19707"	"19683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.4"	""	"77.6"	""	"75.5"	""	"95.9"	"2.5"	"113.4"	"124.2"	""	"1030"	"58"	"37.000"	"30.000"	"8.12469803895164E-05"	"20"	"0"	"1.452E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQAGSEVSALLGR"	"[R].fTQAGSEVSALLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9271"	"0.0000"	"1"	"1"	"1"	"555.64404"	"1664.91758"	"1664.91690"	"0.41"	"0.00023"	"18/140"	"18"	"140"	"7570415.71362305"	"HCD"	"MS2"	"41.50083"	"106.2"	"100.000"	"61.4065"	"19474"	"19474"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.4"	""	"138.5"	""	"152.7"	""	"182.1"	""	"209.6"	"207.9"	""	"1032"	"96"	"37.000"	"30.000"	"1.36977646997938E-08"	"25"	"0"	"4.057E-07"	"1.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQAGSEVSALLGR"	"[R].fTQAGSEVSALLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9481"	"0.0000"	"1"	"1"	"1"	"832.96265"	"1664.91802"	"1664.91690"	"0.67"	"0.00056"	"11/140"	"11"	"140"	"1828394.88641357"	"HCD"	"MS2"	"10.33294"	"89.1"	"100.000"	"61.5074"	"19569"	"19569"	"19539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.7"	""	"121.7"	""	"123.6"	""	"149.7"	"1.1"	"171.4"	"170.6"	""	"1031"	"77"	"37.000"	"30.000"	"1.12519726955507E-06"	"22"	"0"	"4.959E-07"	"1.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEMTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"832.97919"	"1664.95110"	"1664.95448"	"-2.03"	"-0.00169"	"9/84"	"9"	"84"	"1318790.5065918"	"HCD"	"MS2"	"0"	"112.5"	"100.000"	"62.0401"	"19733"	"19733"	"19705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.5"	""	"138.5"	""	"149.4"	""	"159.5"	""	"215.4"	"240.6"	""	"920"	"25"	"36.000"	"29.000"	"0.154084102012601"	"16"	"0"	"7.452E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEMTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"832.98004"	"1664.95281"	"1664.95448"	"-1.01"	"-0.00084"	"9/84"	"9"	"84"	"1519541.84924316"	"HCD"	"MS2"	"33.8299"	"117.9"	"100.000"	"62.1761"	"19842"	"19842"	"19811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.1"	""	"151.4"	""	"173.7"	""	"183.6"	""	"233.1"	"231.1"	""	"936"	"17"	"36.000"	"29.000"	"0.897936970633695"	"18"	"0"	"0.000116"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEMTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"832.98035"	"1664.95342"	"1664.95448"	"-0.64"	"-0.00053"	"7/84"	"7"	"84"	"625196.965026855"	"HCD"	"MS2"	"0"	"61.1"	"100.000"	"62.3554"	"19862"	"19862"	"19833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.8"	""	"83.2"	""	"97.3"	""	"68.7"	""	"118.6"	"113.3"	""	"936"	"25"	"36.000"	"29.000"	"0.163774338169271"	"25"	"0.0006037"	"0.003979"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEMTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.65656"	"1664.95511"	"1664.95448"	"0.38"	"0.00021"	"9/84"	"9"	"84"	"2542534.73699951"	"HCD"	"MS2"	"12.89284"	"81.0"	"100.000"	"62.2431"	"19869"	"19869"	"19843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.6"	""	"109.3"	""	"111.1"	""	"118.4"	""	"152.0"	"158.0"	""	"915"	"25"	"36.000"	"29.000"	"0.133779971286333"	"14"	"0.0001889"	"0.000789"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVmALGSLAVTk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"555.67102"	"1664.99851"	"1665.00210"	"-2.16"	"-0.00120"	"8/108"	"8"	"108"	"21180237.7991943"	"HCD"	"MS2"	"7.890797"	"199.7"	"43.319"	"48.9094"	"14401"	"14401"	"14383"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.0"	"8.8"	"221.1"	""	"287.7"	""	"530.8"	"3.5"	"347.7"	"298.2"	""	"578"	"49"	"34.000"	"27.000"	"0.000408223350395976"	"23"	"0"	"5.819E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVmALGSLAVTk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.8269"	"0.0000"	"1"	"1"	"1"	"555.67157"	"1665.00016"	"1665.00210"	"-1.17"	"-0.00065"	"13/108"	"13"	"108"	"22068985.7003174"	"HCD"	"MS2"	"9.724282"	"252.2"	"52.726"	"49.2213"	"14576"	"14576"	"14558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"247.1"	"10.8"	"296.1"	""	"357.6"	""	"646.9"	"0.9"	"456.4"	"374.4"	""	"539"	"53"	"34.000"	"27.000"	"0.000151550987138799"	"25"	"0"	"6.921E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVmALGSLAVTk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"833.00378"	"1665.00029"	"1665.00210"	"-1.09"	"-0.00090"	"11/108"	"11"	"108"	"2929248.59936523"	"HCD"	"MS2"	"0"	"180.1"	"100.000"	"48.8174"	"14364"	"14364"	"14335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.9"	""	"197.2"	""	"242.3"	""	"543.5"	"1.7"	"333.2"	"240.1"	""	"539"	"77"	"34.000"	"27.000"	"5.90960930076946E-07"	""	"0"	"1.595E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVmALGSLAVTk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8701"	"0.0000"	"1"	"1"	"1"	"833.00421"	"1665.00115"	"1665.00210"	"-0.57"	"-0.00048"	"11/108"	"11"	"108"	"3145837.10577393"	"HCD"	"MS2"	"0"	"180.1"	"100.000"	"49.1134"	"14532"	"14532"	"14511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.4"	""	"174.3"	""	"231.2"	""	"549.0"	""	"338.4"	"261.3"	""	"545"	"77"	"34.000"	"27.000"	"5.83937688805215E-07"	"27"	"0"	"1.942E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVmALGSLAVTk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8784"	"0.0000"	"1"	"1"	"1"	"833.00439"	"1665.00151"	"1665.00210"	"-0.35"	"-0.00029"	"11/108"	"11"	"108"	"1595893.7442627"	"HCD"	"MS2"	"4.172782"	"110.6"	"100.000"	"49.4329"	"14659"	"14659"	"14638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.7"	""	"131.9"	""	"156.5"	""	"274.6"	"0.0"	"199.5"	"170.5"	""	"543"	"74"	"34.000"	"27.000"	"1.03697869533073E-06"	"26"	"0"	"1.922E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMALGSLAVTK"	"[R].tVmALGSLAVTk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"833.00476"	"1665.00224"	"1665.00210"	"0.09"	"0.00007"	"11/108"	"11"	"108"	"2570877.84851074"	"HCD"	"MS2"	"2.224435"	"169.5"	"100.000"	"49.1121"	"14484"	"14484"	"14463"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.1"	""	"193.8"	""	"241.4"	""	"449.5"	"2.6"	"309.5"	"246.2"	""	"556"	"75"	"34.000"	"27.000"	"9.57292807522081E-07"	"27"	"0"	"2.429E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLEKPVTMLL"	"[K].yLEkPVTMLL.[-]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"555.67334"	"1665.00547"	"1665.00612"	"-0.39"	"-0.00022"	"4/80"	"4"	"80"	"1920419.49865723"	"HCD"	"MS2"	"21.29643"	"49.3"	"100.000"	"71.3648"	"23532"	"23532"	"23507"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.3"	""	"59.5"	""	"67.1"	""	"80.0"	"0.1"	"93.7"	"104.6"	""	"537"	"17"	"34.000"	"27.000"	"0.488589680536781"	"15"	"0.0006037"	"0.00515"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLEKPVTMLL"	"[K].yLEkPVTMLL.[-]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.67334"	"1665.00547"	"1665.00612"	"-0.39"	"-0.00022"	"4/80"	"4"	"80"	"2220377.73120117"	"HCD"	"MS2"	"9.391242"	"50.1"	"100.000"	"71.2596"	"23541"	"23541"	"23514"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.5"	""	"55.5"	""	"73.2"	""	"76.6"	""	"107.4"	"96.8"	""	"537"	"12"	"34.000"	"27.000"	"1.55576604990618"	"13"	"0.0001889"	"0.001019"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHAYIISYLK"	"[R].vHAYIISYLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.67505"	"1665.01059"	"1665.01398"	"-2.04"	"-0.00113"	"11/72"	"11"	"72"	"3597269.22766113"	"HCD"	"MS2"	"40.40045"	"105.0"	"100.000"	"50.4970"	"15041"	"15041"	"15015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.9"	""	"154.0"	""	"171.8"	""	"190.4"	"1.7"	"172.5"	"183.5"	""	"455"	"38"	"33.000"	"26.000"	"0.00325822747084731"	"15"	"0"	"0.0001782"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHAYIISYLK"	"[R].vHAYIISYLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"555.67523"	"1665.01114"	"1665.01398"	"-1.71"	"-0.00095"	"7/72"	"7"	"72"	"3608544.20336914"	"HCD"	"MS2"	"0"	"116.1"	"100.000"	"50.7226"	"15183"	"15183"	"15162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.4"	""	"171.7"	""	"197.8"	""	"231.6"	"2.6"	"179.6"	"198.0"	""	"453"	"49"	"33.000"	"26.000"	"0.000317737304083284"	"20"	"0.0001308"	"0.0002501"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.99280"	"1665.96384"	"1665.96499"	"-0.69"	"-0.00038"	"8/86"	"8"	"86"	"10230455.68396"	"HCD"	"MS2"	"0"	"266.0"	"100.000"	"64.5064"	"20793"	"20793"	"20771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.5"	""	"289.9"	""	"246.4"	""	"572.5"	""	"605.7"	"537.4"	""	"879"	"27"	"36.000"	"29.000"	"0.0851057453154533"	"14"	"0.0001889"	"0.0006795"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"833.48615"	"1665.96501"	"1665.96499"	"0.02"	"0.00001"	"9/86"	"9"	"86"	"2496493.29034424"	"HCD"	"MS2"	"10.65597"	"140.6"	"100.000"	"64.5021"	"20791"	"20791"	"20771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.1"	""	"192.0"	""	"163.7"	""	"406.2"	"1.2"	"225.6"	"185.9"	""	"860"	"59"	"36.000"	"29.000"	"5.12234063451771E-05"	"22"	"0.0001889"	"0.0005429"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.48633"	"1665.96538"	"1665.96499"	"0.24"	"0.00020"	"15/86"	"15"	"86"	"1633371.6763916"	"HCD"	"MS2"	"13.75473"	"86.2"	"100.000"	"64.8127"	"20918"	"20918"	"20899"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.7"	""	"94.4"	""	"98.1"	""	"228.2"	"2.3"	"154.4"	"139.2"	""	"852"	"24"	"36.000"	"29.000"	"0.159738498956576"	"14"	"0.001007"	"0.01082"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"555.99359"	"1665.96622"	"1665.96499"	"0.74"	"0.00041"	"8/86"	"8"	"86"	"4513785.15270996"	"HCD"	"MS2"	"9.88723"	"107.4"	"100.000"	"64.8154"	"20919"	"20919"	"20899"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.7"	""	"141.9"	""	"132.4"	""	"234.9"	""	"192.6"	"193.5"	""	"845"	"48"	"36.000"	"29.000"	"0.000599551802913641"	"23"	"0"	"0.0001733"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.48682"	"1665.96636"	"1665.96499"	"0.82"	"0.00069"	"10/86"	"10"	"86"	"1899561.99157715"	"HCD"	"MS2"	"13.11762"	"94.5"	"100.000"	"64.8073"	"20863"	"20863"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.3"	""	"102.1"	""	"98.3"	""	"249.9"	"1.3"	"175.1"	"156.0"	""	"845"	"21"	"36.000"	"29.000"	"0.332526846146179"	"14"	"0.0003839"	"0.001788"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"555.99371"	"1665.96659"	"1665.96499"	"0.96"	"0.00053"	"8/86"	"8"	"86"	"8699383.16430664"	"HCD"	"MS2"	"0"	"218.5"	"100.000"	"64.4897"	"20733"	"20733"	"20713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.2"	""	"238.1"	""	"196.3"	""	"473.4"	""	"484.7"	"451.3"	""	"851"	"25"	"36.000"	"29.000"	"0.142527794361656"	"15"	"0.0002277"	"0.001289"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"833.48718"	"1665.96709"	"1665.96499"	"1.26"	"0.00105"	"8/86"	"8"	"86"	"2416579.20697021"	"HCD"	"MS2"	"8.117261"	"145.1"	"100.000"	"64.4940"	"20735"	"20735"	"20713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.1"	""	"180.2"	""	"155.8"	""	"443.8"	"0.4"	"242.2"	"198.9"	""	"861"	"50"	"36.000"	"29.000"	"0.000426553152276337"	"22"	"0.0001889"	"0.0007158"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIFTGLIGPMK"	"[K].dIFTGLIGPmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"555.99396"	"1665.96732"	"1665.96499"	"1.40"	"0.00078"	"8/86"	"8"	"86"	"4767940.04779053"	"HCD"	"MS2"	"6.086193"	"110.5"	"100.000"	"64.8002"	"20860"	"20860"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.7"	""	"146.3"	""	"123.1"	""	"261.7"	"0.7"	"193.4"	"189.6"	""	"862"	"44"	"36.000"	"29.000"	"0.00191195325534447"	"17"	"0.0001308"	"0.0002067"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYLVDLAGSEK"	"[K].lYLVDLAGSEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"P56536; Q2PQA9"	"Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus OX=10116 GN=Kif5c PE=1 SV=2; Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"833.49396"	"1665.98064"	"1665.98274"	"-1.26"	"-0.00105"	"9/90"	"9"	"90"	"2044229.42944336"	"HCD"	"MS2"	"29.15553"	"124.7"	"100.000"	"63.6581"	"20447"	"20447"	"20419"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.2"	""	"183.2"	""	"183.2"	""	"184.7"	"2.9"	"227.9"	"221.9"	""	"746"	"30"	"35.000"	"28.000"	"0.0357856435555443"	""	"0"	"1.109E-05"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYLVDLAGSEK"	"[K].lYLVDLAGSEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"P56536; Q2PQA9"	"Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus OX=10116 GN=Kif5c PE=1 SV=2; Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"833.49463"	"1665.98198"	"1665.98274"	"-0.46"	"-0.00038"	"8/90"	"8"	"90"	"1762335.30377197"	"HCD"	"MS2"	"7.762772"	"125.7"	"100.000"	"63.6114"	"20375"	"20375"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.4"	""	"194.0"	""	"199.6"	""	"188.3"	"1.6"	"205.4"	"219.4"	""	"735"	"42"	"35.000"	"28.000"	"0.00242804842142792"	""	"0"	"6.484E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTYTAEVSVPK"	"[K].lTYTAEVSVPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"833.49463"	"1665.98198"	"1665.98274"	"-0.46"	"-0.00038"	"10/92"	"10"	"92"	"1993558.75653076"	"HCD"	"MS2"	"0"	"132.4"	"100.000"	"47.0239"	"13678"	"13678"	"13650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.8"	""	"202.0"	""	"196.0"	""	"236.0"	""	"208.6"	"236.1"	""	"735"	"40"	"35.000"	"28.000"	"0.00329046551339476"	"22"	"0"	"2.78E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTYTAEVSVPK"	"[K].lTYTAEVSVPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"833.49530"	"1665.98332"	"1665.98274"	"0.35"	"0.00029"	"9/92"	"9"	"92"	"1854059.37243652"	"HCD"	"MS2"	"0"	"119.2"	"100.000"	"46.7466"	"13516"	"13516"	"13496"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.7"	""	"194.1"	""	"170.9"	""	"210.6"	"2.2"	"197.2"	"205.1"	""	"706"	"62"	"35.000"	"28.000"	"2.03598561577464E-05"	""	"0"	"1.239E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSSNIFTVAK"	"[K].lQSSNIFTVAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"556.00153"	"1665.99002"	"1665.99398"	"-2.37"	"-0.00132"	"11/108"	"11"	"108"	"6749772.91687012"	"HCD"	"MS2"	"25.74458"	"197.7"	"100.000"	"52.2457"	"15756"	"15756"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"250.2"	""	"277.2"	""	"310.2"	""	"322.0"	""	"369.7"	"344.1"	""	"704"	"16"	"35.000"	"28.000"	"0.793492202677655"	"20"	"0.0001889"	"0.0005797"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSSNIFTVAK"	"[K].lQSSNIFTVAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"833.49933"	"1665.99138"	"1665.99398"	"-1.56"	"-0.00130"	"9/108"	"9"	"108"	"2452637.19262695"	"HCD"	"MS2"	"19.23741"	"192.2"	"100.000"	"52.4047"	"15871"	"15871"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.4"	""	"270.8"	""	"275.7"	""	"313.4"	""	"344.6"	"364.7"	""	"676"	"43"	"35.000"	"28.000"	"0.0015919033632217"	"25"	"0"	"2.451E-05"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSSNIFTVAK"	"[K].lQSSNIFTVAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"833.50018"	"1665.99309"	"1665.99398"	"-0.53"	"-0.00044"	"9/108"	"9"	"108"	"2523986.63311768"	"HCD"	"MS2"	"13.58266"	"184.9"	"100.000"	"52.2434"	"15755"	"15755"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.4"	""	"258.4"	""	"251.8"	""	"319.5"	""	"346.7"	"331.6"	""	"666"	"35"	"35.000"	"28.000"	"0.0111030995450157"	"22"	"0"	"3.382E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAMGYKPK"	"[R].aLAMGYkPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.01520"	"1666.03104"	"1666.03290"	"-1.11"	"-0.00062"	"6/70"	"6"	"70"	"9650892.94152832"	"HCD"	"MS2"	"4.839759"	"559.3"	"86.914"	"36.5513"	"9405"	"9405"	"9385"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"867.2"	""	"834.5"	""	"831.6"	""	"677.2"	""	"1017.0"	"1078.3"	""	"370"	"2"	"32.000"	"25.000"	"10.4995752000581"	"13"	"0.0001889"	"0.0004228"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAMGYKPK"	"[R].aLAMGYkPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"556.01556"	"1666.03214"	"1666.03290"	"-0.45"	"-0.00025"	"13/70"	"13"	"70"	"14483185.3970337"	"HCD"	"MS2"	"6.078877"	"937.9"	"100.000"	"36.4090"	"9304"	"9304"	"9274"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1535.2"	""	"1474.1"	""	"1380.1"	""	"1089.0"	"2.1"	"1632.7"	"1764.2"	""	"361"	"12"	"32.000"	"25.000"	"1.01736596876585"	"14"	"0.0001308"	"0.0002879"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPQSTLSEFYPR"	"[R].iPQSTLSEFYPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.95154"	"1666.89580"	"1666.90019"	"-2.63"	"-0.00219"	"7/114"	"7"	"114"	"844959.966369629"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"57.5465"	"17956"	"17956"	"17925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.7"	""	"55.3"	""	"52.1"	""	"60.0"	""	"75.3"	"79.9"	""	"1121"	"11"	"37.000"	"30.000"	"4.4522097556296"	"13"	"0.002711"	"0.04059"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPQSTLSEFYPR"	"[R].iPQSTLSEFYPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.95361"	"1666.89995"	"1666.90019"	"-0.14"	"-0.00012"	"11/114"	"11"	"114"	"797264.043518066"	"HCD"	"MS2"	"0"	"41.7"	"100.000"	"57.3314"	"17814"	"17814"	"17787"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.0"	""	"63.0"	""	"56.5"	""	"64.6"	"0.1"	"75.7"	"85.8"	""	"1094"	"29"	"37.000"	"30.000"	"0.0676063246094148"	"14"	"0.0001308"	"0.0002099"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLESDLVMNVYR"	"[K].vLESDLVMNVYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"833.95557"	"1666.90386"	"1666.90356"	"0.18"	"0.00015"	"8/98"	"8"	"98"	"441191.058044434"	"HCD"	"MS2"	"0"	"34.5"	"100.000"	"61.3897"	"19521"	"19521"	"19491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.2"	""	"45.2"	""	"50.4"	""	"56.8"	"0.8"	"64.4"	"61.1"	""	"1091"	"26"	"37.000"	"30.000"	"0.14053831911449"	"23"	"0"	"4.623E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSGLLEWDSK"	"[R].sSSGLLEWDSk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"833.95630"	"1666.90532"	"1666.90522"	"0.06"	"0.00005"	"14/98"	"14"	"98"	"630142.949890137"	"HCD"	"MS2"	"0"	"69.4"	"100.000"	"49.6104"	"14732"	"14732"	"14702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.8"	""	"75.0"	""	"63.3"	""	"129.1"	""	"152.3"	"146.3"	""	"1110"	"36"	"37.000"	"30.000"	"0.0147330608689643"	"21"	"0.0001308"	"0.0002322"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSGLLEWDSK"	"[R].sSSGLLEWDSk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"833.95648"	"1666.90569"	"1666.90522"	"0.28"	"0.00023"	"15/98"	"15"	"98"	"673637.190734863"	"HCD"	"MS2"	"0"	"65.6"	"100.000"	"49.3283"	"14573"	"14573"	"14543"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.6"	""	"71.3"	""	"67.0"	""	"122.5"	""	"141.7"	"126.9"	""	"1102"	"34"	"37.000"	"30.000"	"0.0228639677491534"	"22"	"0.0001308"	"0.0002694"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIYFITGETK"	"[K].hIYFITGETk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"556.32294"	"1666.95426"	"1666.95686"	"-1.56"	"-0.00087"	"12/78"	"12"	"78"	"34455559.6342773"	"HCD"	"MS2"	"5.289233"	"308.2"	"27.775"	"39.8813"	"10770"	"10770"	"10750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"454.0"	""	"441.2"	""	"461.4"	""	"504.3"	"5.4"	"534.1"	"515.6"	""	"885"	"42"	"36.000"	"29.000"	"0.00282431592639317"	"19"	"0"	"0.0001787"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIYFITGETK"	"[K].hIYFITGETk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"833.98096"	"1666.95464"	"1666.95686"	"-1.34"	"-0.00111"	"9/78"	"9"	"78"	"318008.860839844"	"HCD"	"MS2"	"0"	"30.6"	"100.000"	"39.9774"	"10810"	"10810"	"10781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.9"	""	"53.9"	""	"42.4"	""	"49.7"	""	"47.4"	"51.6"	""	"864"	"56"	"36.000"	"29.000"	"0.000102679500382195"	"17"	"0"	"0.0001342"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIYFITGETK"	"[K].hIYFITGETk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"556.32312"	"1666.95481"	"1666.95686"	"-1.23"	"-0.00069"	"12/78"	"12"	"78"	"35481332.8134766"	"HCD"	"MS2"	"10.93056"	"302.7"	"27.004"	"39.7670"	"10682"	"10682"	"10661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"469.1"	""	"435.8"	""	"466.6"	""	"472.7"	""	"501.1"	"519.6"	""	"859"	"47"	"36.000"	"29.000"	"0.000818395378365214"	"20"	"0.0001308"	"0.0002863"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"556.32324"	"1666.95517"	"1666.95686"	"-1.01"	"-0.00056"	"7/108"	"7"	"108"	"123461929.624512"	"HCD"	"MS2"	"4.371828"	"231.6"	"8.740"	"67.6286"	"22059"	"22059"	"22042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.0"	""	"284.2"	""	"276.2"	""	"419.5"	""	"446.3"	"493.3"	""	"862"	"46"	"36.000"	"29.000"	"0.00107517032731241"	"23"	"0.0001308"	"0.0002277"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7077"	"0.0000"	"1"	"1"	"1"	"833.98145"	"1666.95561"	"1666.95686"	"-0.75"	"-0.00062"	"18/108"	"18"	"108"	"4587979.5435791"	"HCD"	"MS2"	"0"	"315.0"	"100.000"	"67.3698"	"21953"	"21953"	"21938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"450.1"	""	"391.8"	""	"377.8"	""	"600.8"	"3.5"	"582.9"	"578.5"	""	"858"	"65"	"36.000"	"29.000"	"1.39783944729862E-05"	""	"0"	"1.858E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7077"	"0.0000"	"1"	"1"	"1"	"833.98181"	"1666.95635"	"1666.95686"	"-0.31"	"-0.00026"	"18/108"	"18"	"108"	"34454262.4785156"	"HCD"	"MS2"	"0"	"526.8"	"22.684"	"67.6677"	"22075"	"22075"	"22058"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"672.0"	""	"610.8"	""	"651.0"	""	"921.5"	"8.6"	"1016.1"	"1119.3"	""	"881"	"65"	"36.000"	"29.000"	"1.32722915365399E-05"	""	"0"	"5.556E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"833.98187"	"1666.95647"	"1666.95686"	"-0.24"	"-0.00020"	"18/108"	"18"	"108"	"39571689.826416"	"HCD"	"MS2"	"0"	"554.6"	"20.346"	"67.7574"	"22060"	"22060"	"22042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"726.0"	""	"624.2"	""	"681.2"	""	"990.5"	"4.4"	"1081.3"	"1155.2"	""	"881"	"70"	"36.000"	"29.000"	"4.90846742047157E-06"	""	"0"	"2.801E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"556.32379"	"1666.95682"	"1666.95686"	"-0.03"	"-0.00001"	"9/108"	"9"	"108"	"2878543.90917969"	"HCD"	"MS2"	"22.10979"	"76.6"	"100.000"	"68.3907"	"22318"	"22318"	"22298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.6"	""	"94.2"	""	"102.3"	""	"124.6"	"2.6"	"151.4"	"149.2"	""	"877"	"20"	"36.000"	"29.000"	"0.448713977115111"	"19"	"0"	"0.0001554"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"556.32385"	"1666.95700"	"1666.95686"	"0.08"	"0.00005"	"7/108"	"7"	"108"	"105748985.825195"	"HCD"	"MS2"	"5.732077"	"254.7"	"10.482"	"67.7530"	"22059"	"22059"	"22042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.8"	""	"299.1"	""	"310.2"	""	"446.4"	"0.9"	"498.9"	"528.5"	""	"877"	"40"	"36.000"	"29.000"	"0.00425568620637147"	"21"	"0"	"0.0001285"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"833.98218"	"1666.95708"	"1666.95686"	"0.13"	"0.00011"	"9/108"	"9"	"108"	"2945840.66442871"	"HCD"	"MS2"	"0"	"212.9"	"100.000"	"67.4598"	"21940"	"21940"	"21918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.4"	""	"240.0"	""	"254.5"	""	"388.6"	""	"426.7"	"407.1"	""	"876"	"55"	"36.000"	"29.000"	"0.000130759758708607"	"27"	"0"	"1.348E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"556.32391"	"1666.95719"	"1666.95686"	"0.19"	"0.00011"	"8/108"	"8"	"108"	"5894875.46008301"	"HCD"	"MS2"	"17.27178"	"156.9"	"100.000"	"68.0720"	"22188"	"22188"	"22170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.0"	""	"192.8"	""	"172.9"	""	"297.4"	"2.9"	"304.6"	"330.3"	""	"874"	"36"	"36.000"	"29.000"	"0.01146783503459"	"26"	"0"	"6.862E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"556.32397"	"1666.95737"	"1666.95686"	"0.30"	"0.00017"	"10/108"	"10"	"108"	"7049816.68572998"	"HCD"	"MS2"	"19.26379"	"182.8"	"100.000"	"67.9460"	"22188"	"22188"	"22170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.8"	""	"200.5"	""	"220.1"	""	"329.3"	"1.7"	"371.2"	"382.6"	""	"875"	"31"	"36.000"	"29.000"	"0.0367263744102236"	"23"	"0"	"0.0001404"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"556.32404"	"1666.95755"	"1666.95686"	"0.41"	"0.00023"	"11/108"	"11"	"108"	"4421057.55773926"	"HCD"	"MS2"	"26.26677"	"114.2"	"100.000"	"67.4439"	"21933"	"21933"	"21918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.2"	""	"141.1"	""	"136.9"	""	"212.3"	"1.1"	"210.3"	"215.5"	""	"875"	"44"	"36.000"	"29.000"	"0.00170599619170988"	"27"	"0"	"5.513E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7381"	"0.0000"	"1"	"1"	"1"	"556.32410"	"1666.95774"	"1666.95686"	"0.52"	"0.00029"	"11/108"	"11"	"108"	"6507887.43310547"	"HCD"	"MS2"	"0"	"158.2"	"100.000"	"67.3465"	"21944"	"21944"	"21925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"227.7"	""	"189.1"	""	"207.5"	""	"278.5"	""	"302.2"	"295.0"	""	"875"	"42"	"36.000"	"29.000"	"0.00276043838210084"	"27"	"0"	"5.077E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"833.98260"	"1666.95793"	"1666.95686"	"0.64"	"0.00053"	"10/108"	"10"	"108"	"2089864.85198975"	"HCD"	"MS2"	"6.021908"	"138.7"	"100.000"	"67.9903"	"22206"	"22206"	"22186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.6"	""	"168.0"	""	"166.6"	""	"246.8"	"2.2"	"269.6"	"286.4"	""	"875"	"41"	"36.000"	"29.000"	"0.00314035002431221"	"25"	"0"	"5.388E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"833.98315"	"1666.95903"	"1666.95686"	"1.30"	"0.00108"	"15/108"	"15"	"108"	"1625806.85546875"	"HCD"	"MS2"	"14.20875"	"104.8"	"100.000"	"68.1968"	"22239"	"22239"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.9"	""	"114.6"	""	"127.1"	""	"173.9"	""	"226.4"	"221.1"	""	"861"	"21"	"36.000"	"29.000"	"0.367259599084573"	"23"	"0.0001308"	"0.0002237"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHGKKVADALAK"	"[K].aHGKKVADALAk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"2"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"417.51389"	"1667.03371"	"1667.03685"	"-1.88"	"-0.00078"	"13/104"	"13"	"104"	"1253348.77655029"	"HCD"	"MS2"	"12.64884"	"91.1"	"100.000"	"23.3425"	"4064"	"4064"	"4057"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.9"	""	"109.9"	""	"133.1"	""	"151.7"	""	"193.1"	"156.0"	""	"285"	"12"	"31.000"	"24.000"	"0.897046310571507"	"13"	"0.009459"	"0.4208"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHGKKVADALAK"	"[K].aHGKKVADALAk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"2"	"4"	"4"	"0.6818"	"0.0000"	"1"	"1"	"1"	"417.51407"	"1667.03444"	"1667.03685"	"-1.44"	"-0.00060"	"14/104"	"14"	"104"	"1752160.1940918"	"HCD"	"MS2"	"47.74117"	"134.0"	"100.000"	"23.2563"	"3996"	"3996"	"3983"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.5"	""	"161.5"	""	"204.4"	""	"224.6"	"2.1"	"242.9"	"241.9"	""	"271"	"22"	"31.000"	"24.000"	"0.0783320144234748"	"21"	"0.0006037"	"0.005104"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVAPAPAVVK"	"[K].kVAPAPAVVk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.37708"	"1667.11667"	"1667.11867"	"-1.20"	"-0.00067"	"8/92"	"8"	"92"	"12731064.6330566"	"HCD"	"MS2"	"25.56644"	"467.4"	"73.112"	"32.6852"	"7788"	"7788"	"7768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"746.3"	""	"657.1"	""	"692.9"	""	"720.1"	"3.4"	"816.0"	"786.6"	""	"30"	"53"	"21.000"	"14.000"	"6.79346369855432E-06"	""	"0.0001308"	"0.0002315"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVAPAPAVVK"	"[K].kVAPAPAVVk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.37714"	"1667.11686"	"1667.11867"	"-1.09"	"-0.00061"	"8/92"	"8"	"92"	"12198833.1251221"	"HCD"	"MS2"	"29.91903"	"596.4"	"100.000"	"32.7483"	"7857"	"7857"	"7830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"972.4"	""	"844.8"	""	"878.1"	""	"910.4"	"6.1"	"1045.5"	"984.8"	""	"30"	"52"	"21.000"	"14.000"	"1.00714327938893E-05"	""	"0"	"6.043E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFELEEQDLFR"	"[R].lFELEEQDLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"834.44556"	"1667.88384"	"1667.88420"	"-0.22"	"-0.00018"	"10/98"	"10"	"98"	"1691531.26696777"	"HCD"	"MS2"	"15.55197"	"91.6"	"100.000"	"75.3766"	"25170"	"25170"	"25153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.7"	""	"117.0"	""	"114.1"	""	"164.2"	"1.0"	"187.0"	"175.2"	""	"979"	"43"	"36.000"	"29.000"	"0.00247031705157347"	"23"	"0"	"1.794E-05"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALFHMDNAYK"	"[R].aLFHMDNAYk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.63739"	"1667.89762"	"1667.89797"	"-0.21"	"-0.00012"	"13/78"	"13"	"78"	"29890814.7375488"	"HCD"	"MS2"	"12.82216"	"485.0"	"49.613"	"40.6691"	"11048"	"11048"	"11029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"675.2"	""	"692.3"	""	"682.5"	""	"741.0"	""	"886.7"	"920.5"	""	"1013"	"51"	"37.000"	"30.000"	"0.000387774681400552"	"16"	"0"	"0.0001291"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALFHMDNAYK"	"[R].aLFHMDNAYk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.63770"	"1667.89853"	"1667.89797"	"0.34"	"0.00019"	"14/78"	"14"	"78"	"28178029.3638916"	"HCD"	"MS2"	"9.38802"	"493.6"	"55.974"	"40.8481"	"11166"	"11166"	"11149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"705.4"	""	"718.3"	""	"700.8"	""	"764.7"	"0.0"	"836.5"	"948.4"	""	"1020"	"52"	"37.000"	"30.000"	"0.000294828984176916"	"16"	"0"	"6.203E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSWVTEMK"	"[R].dLTSWVTEMk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"834.45752"	"1667.90776"	"1667.90786"	"-0.06"	"-0.00005"	"16/86"	"16"	"86"	"6857352.82873535"	"HCD"	"MS2"	"29.4667"	"456.3"	"100.000"	"68.4168"	"22380"	"22380"	"22362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"581.2"	""	"576.1"	""	"528.7"	""	"734.6"	"0.5"	"869.7"	"1041.4"	""	"989"	"36"	"36.000"	"29.000"	"0.0123642078135888"	"21"	"0"	"0.0001036"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSWVTEMK"	"[R].dLTSWVTEMk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"834.45776"	"1667.90825"	"1667.90786"	"0.23"	"0.00019"	"7/86"	"7"	"86"	"6951238.85687256"	"HCD"	"MS2"	"30.23762"	"467.9"	"100.000"	"68.5426"	"22380"	"22380"	"22362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"577.1"	""	"563.3"	""	"558.8"	""	"792.6"	""	"909.3"	"1042.4"	""	"981"	"43"	"36.000"	"29.000"	"0.00225236625296484"	"20"	"0"	"0.0001014"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSWVTEMK"	"[R].dLTSWVTEMk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.6129"	"0.0000"	"1"	"1"	"1"	"556.64130"	"1667.90934"	"1667.90786"	"0.88"	"0.00049"	"10/86"	"10"	"86"	"2010960.34533691"	"HCD"	"MS2"	"22.48558"	"67.5"	"100.000"	"68.7894"	"22481"	"22481"	"22458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.5"	""	"91.0"	""	"87.0"	""	"93.8"	"0.4"	"145.8"	"147.6"	""	"984"	"31"	"36.000"	"29.000"	"0.0408286577617096"	"27"	"0.0001889"	"0.000475"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFQLFGSPLGK"	"[K].dFqLFGSPLGk.[D]"	"N-Term(TMT6plex); Q3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.65131"	"1667.93937"	"1667.94088"	"-0.91"	"-0.00050"	"10/108"	"10"	"108"	"797155.581359863"	"HCD"	"MS2"	"47.57308"	"34.3"	"100.000"	"69.9724"	"22964"	"22964"	"22937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.5"	""	"41.6"	""	"46.4"	""	"63.0"	""	"77.9"	"61.2"	""	"872"	"32"	"36.000"	"29.000"	"0.0245746017940116"	"15"	"7.476E-05"	"0.0001991"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPVGASFSFGGK"	"[R].rPVGASFSFGGk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.65869"	"1667.96152"	"1667.96335"	"-1.09"	"-0.00061"	"10/114"	"10"	"114"	"17838457.1511841"	"HCD"	"MS2"	"0"	"456.6"	"72.467"	"37.2502"	"9692"	"9692"	"9670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"662.4"	""	"683.5"	""	"708.4"	""	"723.5"	"3.1"	"761.2"	"777.3"	""	"732"	"30"	"35.000"	"28.000"	"0.0332262314045216"	"14"	"0"	"1.003E-05"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPVGASFSFGGK"	"[R].rPVGASFSFGGk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.65881"	"1667.96189"	"1667.96335"	"-0.87"	"-0.00049"	"10/114"	"10"	"114"	"15466152.5532227"	"HCD"	"MS2"	"13.15181"	"543.0"	"98.844"	"37.1384"	"9603"	"9603"	"9578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"776.8"	""	"807.7"	""	"866.5"	""	"836.9"	"4.1"	"921.8"	"923.8"	""	"732"	"34"	"35.000"	"28.000"	"0.0149789401461184"	"15"	"0"	"7.272E-06"	"1.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPPLIPAEVDK"	"[R].mPPLIPAEVDk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.49347"	"1667.97966"	"1667.98064"	"-0.58"	"-0.00049"	"10/84"	"10"	"84"	"880797.411071777"	"HCD"	"MS2"	"0"	"51.3"	"100.000"	"58.5611"	"18371"	"18371"	"18341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.5"	""	"61.7"	""	"63.0"	""	"70.3"	"0.6"	"97.0"	"123.0"	""	"612"	"41"	"34.000"	"27.000"	"0.00222700620188268"	"15"	"0.0001889"	"0.0004992"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPPLIPAEVDK"	"[R].mPPLIPAEVDk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"556.66492"	"1667.98020"	"1667.98064"	"-0.26"	"-0.00015"	"6/84"	"6"	"84"	"1166902.08422852"	"HCD"	"MS2"	"9.231777"	"48.7"	"100.000"	"58.5460"	"18311"	"18311"	"18281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.8"	""	"67.1"	""	"62.6"	""	"75.7"	""	"97.2"	"104.2"	""	"590"	"15"	"34.000"	"27.000"	"0.858661549829648"	"20"	"0.006751"	"0.2502"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDILDSALLRPGR"	"[R].iDILDSALLRPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.67139"	"1667.99961"	"1668.00057"	"-0.58"	"-0.00032"	"9/110"	"9"	"110"	"7230915.828125"	"HCD"	"MS2"	"5.94573"	"174.8"	"100.000"	"63.4266"	"20299"	"20299"	"20281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.4"	""	"224.2"	""	"243.6"	""	"274.2"	""	"327.3"	"332.5"	""	"473"	"38"	"33.000"	"26.000"	"0.00340275863757507"	"15"	"0"	"2.227E-06"	"1.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIRPAINVGLSVSR"	"[K].gIRPAINVGLSVSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"556.67517"	"1668.01096"	"1668.01180"	"-0.51"	"-0.00028"	"17/130"	"17"	"130"	"14321468.5651245"	"HCD"	"MS2"	"7.454877"	"300.8"	"74.107"	"39.5215"	"10624"	"10624"	"10606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.4"	""	"424.3"	""	"456.2"	""	"500.8"	"1.1"	"580.0"	"568.2"	""	"401"	"47"	"33.000"	"26.000"	"0.000425710514631044"	"18"	"0"	"5.564E-06"	"1.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTYLVMNK"	"[R].yYTYLVmNk.[G]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"834.95740"	"1668.90752"	"1668.90714"	"0.23"	"0.00019"	"6/66"	"6"	"66"	"1945788.66223145"	"HCD"	"MS2"	"22.66614"	"149.1"	"100.000"	"48.9670"	"14425"	"14425"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.6"	""	"182.7"	""	"150.8"	""	"443.4"	""	"225.3"	"213.9"	""	"995"	"37"	"36.000"	"29.000"	"0.0101109761294077"	"18"	"0.0006037"	"0.004264"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTYLVMNK"	"[R].yYTYLVmNk.[G]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"834.95789"	"1668.90849"	"1668.90714"	"0.81"	"0.00068"	"7/66"	"7"	"66"	"1614516.34051514"	"HCD"	"MS2"	"0"	"130.0"	"100.000"	"49.2766"	"14599"	"14599"	"14574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.6"	""	"137.4"	""	"105.5"	""	"421.4"	"2.0"	"201.8"	"210.7"	""	"1015"	"26"	"37.000"	"30.000"	"0.133793817830638"	"17"	"0.0008731"	"0.009089"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSFTGSVPTGMK"	"[K].vSFTGSVPTGMk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"556.98389"	"1668.93711"	"1668.93950"	"-1.43"	"-0.00080"	"13/102"	"13"	"102"	"11539509.9786987"	"HCD"	"MS2"	"35.58638"	"308.0"	"100.000"	"47.1102"	"13665"	"13665"	"13640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"497.6"	""	"476.7"	""	"467.9"	""	"353.6"	"5.9"	"545.9"	"567.3"	""	"885"	"39"	"36.000"	"29.000"	"0.00527124588552113"	"17"	"0"	"0.0001309"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dMGLTAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.9306"	"0.0000"	"1"	"1"	"1"	"834.97241"	"1668.93755"	"1668.93950"	"-1.17"	"-0.00098"	"10/98"	"10"	"98"	"1314350.07196045"	"HCD"	"MS2"	"0"	"119.2"	"100.000"	"63.1327"	"20232"	"20232"	"20211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.3"	""	"241.1"	""	"168.1"	""	"143.3"	""	"156.2"	"171.3"	""	"892"	"72"	"36.000"	"29.000"	"2.76907589266609E-06"	"22"	"0"	"5.543E-06"	"1.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSFTGSVPTGMK"	"[K].vSFTGSVPTGMk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"556.98407"	"1668.93766"	"1668.93950"	"-1.10"	"-0.00061"	"11/102"	"11"	"102"	"3669082.13043213"	"HCD"	"MS2"	"29.05887"	"149.6"	"95.968"	"47.7102"	"13958"	"13958"	"13938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.4"	""	"205.8"	""	"206.5"	""	"228.4"	""	"291.1"	"285.6"	""	"892"	"29"	"36.000"	"29.000"	"0.0600253717908953"	"16"	"7.476E-05"	"0.0001906"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSFTGSVPTGMK"	"[K].vSFTGSVPTGMk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9740"	"0.0000"	"1"	"1"	"1"	"834.97260"	"1668.93791"	"1668.93950"	"-0.95"	"-0.00079"	"19/102"	"19"	"102"	"3795078.74133301"	"HCD"	"MS2"	"0"	"271.4"	"100.000"	"47.1079"	"13664"	"13664"	"13640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"527.6"	""	"452.7"	""	"429.8"	""	"215.8"	""	"440.0"	"500.4"	""	"891"	"77"	"36.000"	"29.000"	"8.84805285682711E-07"	"20"	"0"	"3.84E-06"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSFTGSVPTGMK"	"[K].vSFTGSVPTGMk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"556.98425"	"1668.93821"	"1668.93950"	"-0.78"	"-0.00043"	"13/102"	"13"	"102"	"14070309.1526489"	"HCD"	"MS2"	"27.22672"	"370.2"	"100.000"	"47.4129"	"13837"	"13837"	"13810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"639.0"	""	"585.9"	""	"573.6"	""	"412.0"	"2.9"	"619.5"	"668.6"	""	"881"	"40"	"36.000"	"29.000"	"0.00412046199461997"	"18"	"0"	"8.262E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSFTGSVPTGMK"	"[K].vSFTGSVPTGMk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"556.98431"	"1668.93839"	"1668.93950"	"-0.67"	"-0.00037"	"11/102"	"11"	"102"	"3537930.22369385"	"HCD"	"MS2"	"38.68005"	"147.4"	"100.000"	"47.4188"	"13791"	"13791"	"13768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.0"	""	"200.5"	""	"198.3"	""	"228.0"	""	"285.8"	"290.5"	""	"882"	"30"	"36.000"	"29.000"	"0.0402196780155956"	"17"	"0.0001889"	"0.0003837"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dMGLTAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"556.98450"	"1668.93894"	"1668.93950"	"-0.34"	"-0.00019"	"8/98"	"8"	"98"	"18004935.6715088"	"HCD"	"MS2"	"6.504211"	"369.5"	"100.000"	"62.7757"	"20086"	"20086"	"20067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"814.1"	""	"753.5"	""	"560.3"	""	"466.7"	""	"406.0"	"481.4"	""	"874"	"57"	"36.000"	"29.000"	"8.56015122322118E-05"	"23"	"0"	"3.361E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dMGLTAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.9265"	"0.0000"	"1"	"1"	"1"	"834.97339"	"1668.93950"	"1668.93950"	"0.00"	"0.00000"	"10/98"	"10"	"98"	"5836060.03912354"	"HCD"	"MS2"	"0"	"456.7"	"100.000"	"62.7806"	"20088"	"20088"	"20067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1031.9"	""	"950.5"	""	"669.8"	""	"561.1"	"2.3"	"517.4"	"563.8"	""	"880"	"68"	"36.000"	"29.000"	"6.50807690794011E-06"	"22"	"0"	"9.254E-06"	"1.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSFTGSVPTGMK"	"[K].vSFTGSVPTGMk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.97345"	"1668.93962"	"1668.93950"	"0.07"	"0.00006"	"8/102"	"8"	"102"	"693920.685546875"	"HCD"	"MS2"	"0"	"60.5"	"100.000"	"47.4211"	"13792"	"13792"	"13768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.7"	""	"96.5"	""	"105.5"	""	"63.9"	""	"99.8"	"111.1"	""	"880"	"42"	"36.000"	"29.000"	"0.00309351820748886"	"15"	"0"	"0.0001181"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dMGLTAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"556.98486"	"1668.94004"	"1668.93950"	"0.32"	"0.00018"	"9/98"	"9"	"98"	"14130933.2337646"	"HCD"	"MS2"	"7.214799"	"209.0"	"56.365"	"62.9526"	"20106"	"20106"	"20089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.3"	""	"358.9"	""	"292.4"	""	"296.0"	""	"308.6"	"341.3"	""	"868"	"57"	"36.000"	"29.000"	"9.17254243289105E-05"	"22"	"0"	"7.124E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dMGLTAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.8596"	"0.0000"	"1"	"1"	"1"	"556.98492"	"1668.94022"	"1668.93950"	"0.43"	"0.00024"	"9/98"	"9"	"98"	"12395725.5396729"	"HCD"	"MS2"	"15.65554"	"277.8"	"100.000"	"62.6530"	"19983"	"19983"	"19961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"595.3"	""	"557.1"	""	"415.0"	""	"364.8"	""	"330.1"	"355.5"	""	"847"	"57"	"36.000"	"29.000"	"8.58723631717263E-05"	"24"	"0"	"5.402E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSFTGSVPTGMK"	"[K].vSFTGSVPTGMk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9610"	"0.0000"	"1"	"1"	"1"	"834.97382"	"1668.94036"	"1668.93950"	"0.51"	"0.00043"	"19/102"	"19"	"102"	"2761207.2364502"	"HCD"	"MS2"	"11.97585"	"197.4"	"100.000"	"47.3714"	"13820"	"13820"	"13794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"379.8"	""	"343.4"	""	"317.6"	""	"166.6"	""	"306.3"	"352.0"	""	"845"	"77"	"36.000"	"29.000"	"8.86802100830938E-07"	"21"	"0"	"2.921E-06"	"1.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dMGLTAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"834.97388"	"1668.94048"	"1668.93950"	"0.59"	"0.00049"	"10/98"	"10"	"98"	"3402830.24945068"	"HCD"	"MS2"	"0"	"304.9"	"100.000"	"62.9570"	"20107"	"20107"	"20089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"642.9"	""	"612.0"	""	"454.5"	""	"381.5"	"2.9"	"363.2"	"413.8"	""	"844"	"72"	"36.000"	"29.000"	"2.38403403370792E-06"	"21"	"0"	"8.528E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSFTGSVPTGMK"	"[K].vSFTGSVPTGMk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9865"	"0.0000"	"1"	"1"	"1"	"834.97412"	"1668.94097"	"1668.93950"	"0.88"	"0.00073"	"19/102"	"19"	"102"	"1185001.91601563"	"HCD"	"MS2"	"0"	"93.0"	"100.000"	"47.6661"	"13940"	"13940"	"13922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.2"	""	"147.2"	""	"147.9"	""	"78.7"	"3.1"	"164.9"	"161.3"	""	"844"	"74"	"36.000"	"29.000"	"1.65696162738631E-06"	"18"	"0"	"8.389E-06"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dMGLTAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"834.97412"	"1668.94097"	"1668.93950"	"0.88"	"0.00073"	"9/98"	"9"	"98"	"3600940.25543213"	"HCD"	"MS2"	"0"	"290.0"	"100.000"	"62.6507"	"19982"	"19982"	"19961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"647.2"	""	"596.9"	""	"422.5"	""	"382.7"	"1.9"	"333.9"	"342.9"	""	"844"	"75"	"36.000"	"29.000"	"1.25693393321912E-06"	"22"	"0"	"1E-05"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"834.97729"	"1668.94731"	"1668.94820"	"-0.53"	"-0.00044"	"10/138"	"10"	"138"	"572837.906555176"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"40.5263"	"11034"	"11034"	"11005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.3"	""	"30.7"	""	"30.9"	""	"41.1"	""	"46.4"	"41.9"	""	"838"	"55"	"36.000"	"29.000"	"0.000125954597080123"	"22"	"0"	"4.824E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.97766"	"1668.94805"	"1668.94820"	"-0.09"	"-0.00008"	"12/138"	"12"	"138"	"3714378.83325195"	"HCD"	"MS2"	"0"	"109.5"	"100.000"	"40.0599"	"10799"	"10799"	"10773"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.2"	""	"153.7"	""	"140.9"	""	"159.2"	""	"217.9"	"202.2"	""	"825"	"47"	"36.000"	"29.000"	"0.000912901567712325"	"15"	"0"	"4.236E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98755"	"1668.94809"	"1668.94820"	"-0.06"	"-0.00004"	"10/138"	"10"	"138"	"24520925.8216553"	"HCD"	"MS2"	"9.754662"	"146.9"	"44.219"	"40.1613"	"10840"	"10840"	"10821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.9"	""	"187.6"	""	"207.4"	""	"208.7"	""	"306.4"	"308.9"	""	"825"	"69"	"36.000"	"29.000"	"4.86882262206338E-06"	"17"	"0"	"8.985E-06"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.97772"	"1668.94817"	"1668.94820"	"-0.02"	"-0.00002"	"12/138"	"12"	"138"	"4396232.52655029"	"HCD"	"MS2"	"0"	"122.6"	"100.000"	"40.2091"	"10904"	"10904"	"10877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.9"	""	"179.5"	""	"152.1"	""	"197.7"	""	"235.2"	"210.0"	""	"825"	"53"	"36.000"	"29.000"	"0.000203434194131411"	"16"	"0"	"4.339E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98767"	"1668.94846"	"1668.94820"	"0.16"	"0.00009"	"10/138"	"10"	"138"	"23532099.532959"	"HCD"	"MS2"	"10.63929"	"141.1"	"45.468"	"40.3109"	"10945"	"10945"	"10925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.1"	""	"179.9"	""	"188.4"	""	"209.4"	""	"301.2"	"295.2"	""	"822"	"74"	"36.000"	"29.000"	"1.73716800463163E-06"	"17"	"0"	"9.832E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALTGLTVAEYFR"	"[R].vALTGLTVAEYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"556.98798"	"1668.94937"	"1668.95222"	"-1.71"	"-0.00095"	"12/108"	"12"	"108"	"3975717.08312988"	"HCD"	"MS2"	"23.25267"	"36.2"	"100.000"	"74.1347"	"24715"	"24715"	"24687"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.7"	"6.1"	"40.7"	""	"38.7"	""	"54.0"	"1.4"	"86.8"	"82.8"	""	"805"	"57"	"36.000"	"29.000"	"7.24045543339337E-05"	"23"	"0"	"5.464E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALTGLTVAEYFR"	"[R].vALTGLTVAEYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"556.98816"	"1668.94992"	"1668.95222"	"-1.38"	"-0.00077"	"12/108"	"12"	"108"	"637726.66986084"	"HCD"	"MS2"	"19.06593"	"26.5"	"100.000"	"74.7668"	"24973"	"24973"	"24943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.7"	""	"31.1"	""	"29.8"	""	"48.1"	""	"66.3"	"52.5"	""	"804"	"10"	"36.000"	"29.000"	"3.83024057937508"	"14"	"0.0001889"	"0.0005322"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALTGLTVAEYFR"	"[R].vALTGLTVAEYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9851"	"0.0000"	"1"	"1"	"1"	"556.98846"	"1668.95084"	"1668.95222"	"-0.83"	"-0.00046"	"10/108"	"10"	"108"	"6107101.64672852"	"HCD"	"MS2"	"2.12139"	"45.8"	"100.000"	"74.1743"	"24679"	"24679"	"24657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.2"	"8.6"	"62.1"	""	"51.2"	""	"80.6"	"1.4"	"87.7"	"96.4"	""	"801"	"67"	"36.000"	"29.000"	"7.56140535313066E-06"	"18"	"0"	"7.838E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALTGLTVAEYFR"	"[R].vALTGLTVAEYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9828"	"0.0000"	"1"	"1"	"1"	"834.97913"	"1668.95098"	"1668.95222"	"-0.75"	"-0.00062"	"12/108"	"12"	"108"	"3569073.61639404"	"HCD"	"MS2"	"34.79513"	"181.8"	"100.000"	"74.1531"	"24722"	"24722"	"24703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.3"	""	"248.3"	""	"246.1"	""	"326.2"	"0.3"	"347.1"	"361.9"	""	"801"	"58"	"36.000"	"29.000"	"5.74913518058139E-05"	"17"	"0"	"2.412E-06"	"1.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALTGLTVAEYFR"	"[R].vALTGLTVAEYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.8871"	"0.0000"	"1"	"1"	"1"	"556.98853"	"1668.95102"	"1668.95222"	"-0.72"	"-0.00040"	"12/108"	"12"	"108"	"6957953.43017578"	"HCD"	"MS2"	"1.965909"	"59.4"	"100.000"	"74.4208"	"24832"	"24832"	"24815"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.9"	"9.3"	"80.3"	""	"82.1"	""	"86.4"	""	"114.8"	"125.6"	""	"801"	"62"	"36.000"	"29.000"	"2.28350791048439E-05"	"23"	"0"	"1.922E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALTGLTVAEYFR"	"[R].vALTGLTVAEYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.97961"	"1668.95195"	"1668.95222"	"-0.16"	"-0.00014"	"11/108"	"11"	"108"	"3767655.88189697"	"HCD"	"MS2"	"45.76045"	"198.0"	"100.000"	"74.1649"	"24675"	"24675"	"24657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.1"	""	"258.6"	""	"282.2"	""	"343.6"	""	"382.6"	"412.5"	""	"801"	"44"	"36.000"	"29.000"	"0.00158344331337285"	"15"	"0"	"8.578E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALTGLTVAEYFR"	"[R].vALTGLTVAEYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"556.98914"	"1668.95285"	"1668.95222"	"0.38"	"0.00021"	"14/108"	"14"	"108"	"4238512.66503906"	"HCD"	"MS2"	"3.197824"	"54.6"	"100.000"	"74.4787"	"24803"	"24803"	"24785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.9"	"6.0"	"67.7"	""	"84.2"	""	"87.2"	""	"105.6"	"106.5"	""	"794"	"52"	"35.000"	"28.000"	"0.000262295298859016"	"19"	"0"	"3.166E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALTGLTVAEYFR"	"[R].vALTGLTVAEYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"834.98047"	"1668.95366"	"1668.95222"	"0.86"	"0.00072"	"11/108"	"11"	"108"	"3378638.13970947"	"HCD"	"MS2"	"12.55208"	"185.6"	"100.000"	"74.4644"	"24849"	"24849"	"24831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.8"	""	"266.3"	""	"250.2"	""	"288.0"	"2.4"	"358.9"	"359.9"	""	"793"	"55"	"35.000"	"28.000"	"0.000131293489667847"	"25"	"0"	"1.697E-06"	"1.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALTGLTVAEYFR"	"[R].vALTGLTVAEYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"834.98096"	"1668.95464"	"1668.95222"	"1.45"	"0.00121"	"11/108"	"11"	"108"	"3163349.83807373"	"HCD"	"MS2"	"14.34436"	"183.4"	"100.000"	"74.4743"	"24802"	"24802"	"24785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"214.1"	""	"257.8"	""	"254.1"	""	"293.5"	"3.7"	"356.7"	"360.4"	""	"784"	"54"	"35.000"	"28.000"	"0.000163036959313656"	"20"	"0"	"3.142E-06"	"1.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.3548"	"0.0000"	"1"	"1"	"1"	"835.00897"	"1669.01067"	"1669.01393"	"-1.96"	"-0.00163"	"6/78"	"6"	"78"	"1390820.06762695"	"HCD"	"MS2"	"0"	"147.6"	"100.000"	"33.2410"	"8058"	"8058"	"8042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.9"	""	"242.2"	""	"207.0"	""	"171.8"	""	"254.8"	"251.5"	""	"457"	"31"	"33.000"	"26.000"	"0.0164394091473845"	""	"0.0004166"	"0.002236"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.3810"	"0.0000"	"1"	"1"	"1"	"557.00842"	"1669.01072"	"1669.01393"	"-1.93"	"-0.00107"	"7/78"	"7"	"78"	"10069805.6704102"	"HCD"	"MS2"	"0"	"646.7"	"96.253"	"33.4058"	"8078"	"8078"	"8066"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1158.7"	""	"1064.3"	""	"875.8"	""	"814.6"	""	"1102.2"	"1103.0"	""	"455"	"21"	"33.000"	"26.000"	"0.201827992738636"	""	"0.0003839"	"0.001588"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"557.00848"	"1669.01090"	"1669.01393"	"-1.82"	"-0.00101"	"10/78"	"10"	"78"	"171261944.711914"	"HCD"	"MS2"	"6.026271"	"599.3"	"5.554"	"33.1793"	"8034"	"8034"	"8022"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1102.9"	""	"960.0"	""	"866.3"	""	"723.2"	""	"1009.2"	"1009.1"	""	"453"	"22"	"33.000"	"26.000"	"0.151379897329291"	"26"	"0.0006737"	"0.006603"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.3913"	"0.0000"	"1"	"1"	"1"	"557.00861"	"1669.01126"	"1669.01393"	"-1.60"	"-0.00089"	"10/78"	"10"	"78"	"200884529.585938"	"HCD"	"MS2"	"7.306324"	"556.0"	"4.236"	"33.1044"	"7961"	"7961"	"7944"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1058.2"	""	"861.2"	""	"772.6"	""	"682.0"	""	"982.2"	"903.9"	""	"446"	"23"	"33.000"	"26.000"	"0.103348663101192"	""	"0.0008453"	"0.008343"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"557.00861"	"1669.01126"	"1669.01393"	"-1.60"	"-0.00089"	"10/78"	"10"	"78"	"8673468.00726318"	"HCD"	"MS2"	"0"	"579.7"	"100.000"	"33.5043"	"8161"	"8161"	"8145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1052.4"	""	"894.6"	""	"827.5"	""	"744.3"	""	"977.6"	"985.1"	""	"446"	"22"	"33.000"	"26.000"	"0.151811566988704"	"26"	"0.0001889"	"0.0008874"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"557.00873"	"1669.01163"	"1669.01393"	"-1.38"	"-0.00077"	"11/78"	"11"	"78"	"60235312.3643799"	"HCD"	"MS2"	"23.14728"	"3746.3"	"86.053"	"32.8063"	"7838"	"7838"	"7816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7455.3"	""	"6107.2"	""	"5102.8"	""	"4869.5"	""	"6218.5"	"5845.4"	""	"439"	"16"	"33.000"	"26.000"	"0.541295634522937"	"23"	"0.0006037"	"0.006021"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"557.00909"	"1669.01273"	"1669.01393"	"-0.72"	"-0.00040"	"7/78"	"7"	"78"	"92502762.4083252"	"HCD"	"MS2"	"9.315747"	"3086.7"	"44.944"	"32.8858"	"7913"	"7913"	"7894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6213.2"	""	"5118.0"	""	"4195.2"	""	"3958.4"	""	"5079.3"	"4760.2"	""	"448"	"18"	"33.000"	"26.000"	"0.336703800404165"	"23"	"0.000523"	"0.003285"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"835.01019"	"1669.01311"	"1669.01393"	"-0.49"	"-0.00041"	"5/78"	"5"	"78"	"1949455.9072876"	"HCD"	"MS2"	"0"	"205.4"	"100.000"	"33.1478"	"7978"	"7978"	"7960"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.7"	""	"309.9"	""	"301.8"	""	"248.5"	""	"373.6"	"351.1"	""	"427"	"18"	"33.000"	"26.000"	"0.304367221234067"	""	"0.0003839"	"0.001818"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"835.01025"	"1669.01323"	"1669.01393"	"-0.42"	"-0.00035"	"10/78"	"10"	"78"	"6631719.88867188"	"HCD"	"MS2"	"0"	"629.2"	"100.000"	"32.9430"	"7937"	"7937"	"7910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1274.6"	""	"1023.6"	""	"866.7"	""	"782.3"	"0.6"	"1015.8"	"978.9"	""	"427"	"30"	"33.000"	"26.000"	"0.0199709111430502"	""	"0.0006037"	"0.004849"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"835.01050"	"1669.01372"	"1669.01393"	"-0.13"	"-0.00011"	"10/78"	"10"	"78"	"5886629.68988037"	"HCD"	"MS2"	"6.690793"	"524.5"	"100.000"	"32.8635"	"7862"	"7862"	"7832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1056.9"	""	"860.3"	""	"712.5"	""	"671.7"	"5.2"	"842.2"	"804.7"	""	"427"	"33"	"33.000"	"26.000"	"0.0103847938415127"	""	"0.0009404"	"0.01001"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPSIVNEVLK"	"[R].vLPSIVNEVLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"3"	"3"	"0.6750"	"0.0000"	"1"	"1"	"1"	"557.02655"	"1669.06510"	"1669.06641"	"-0.79"	"-0.00044"	"11/96"	"11"	"96"	"3426343.81481934"	"HCD"	"MS2"	"33.00388"	"78.5"	"100.000"	"76.2769"	"25584"	"25584"	"25567"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.1"	""	"105.1"	""	"116.1"	""	"137.0"	"1.8"	"131.0"	"164.7"	""	"176"	"40"	"29.000"	"22.000"	"0.000886099868589588"	""	"0"	"0.000111"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPSIVNEVLK"	"[R].vLPSIVNEVLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"3"	"3"	"0.7073"	"0.0000"	"1"	"1"	"1"	"557.02686"	"1669.06601"	"1669.06641"	"-0.24"	"-0.00013"	"11/96"	"11"	"96"	"3135497.21185303"	"HCD"	"MS2"	"41.08974"	"74.4"	"100.000"	"76.3009"	"25542"	"25542"	"25521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.2"	""	"103.4"	""	"105.9"	""	"128.6"	""	"132.6"	"158.6"	""	"148"	"41"	"28.000"	"21.000"	"0.00058375648703773"	""	"0"	"9.731E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPSIVNEVLK"	"[R].vLPSIVNEVLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"835.03687"	"1669.06645"	"1669.06641"	"0.02"	"0.00002"	"16/96"	"16"	"96"	"1536571.21398926"	"HCD"	"MS2"	"30.12694"	"103.6"	"100.000"	"76.2956"	"25540"	"25540"	"25521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.3"	""	"139.1"	""	"139.2"	""	"175.4"	"2.1"	"186.9"	"219.0"	""	"148"	"54"	"28.000"	"21.000"	"3.00076316231804E-05"	"20"	"0"	"1.958E-05"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPSIVNEVLK"	"[R].vLPSIVNEVLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"835.03729"	"1669.06731"	"1669.06641"	"0.54"	"0.00045"	"10/96"	"10"	"96"	"1477718.96569824"	"HCD"	"MS2"	"37.51044"	"105.8"	"100.000"	"76.2492"	"25572"	"25572"	"25551"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.8"	""	"137.0"	""	"135.2"	""	"168.7"	"2.3"	"208.2"	"224.9"	""	"149"	"55"	"28.000"	"21.000"	"2.30757737791635E-05"	"20"	"0"	"7.65E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DKDNFWMTR"	"[K].dkDNFWMTR.[Q]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"557.62878"	"1670.87180"	"1670.87248"	"-0.41"	"-0.00023"	"4/92"	"4"	"92"	"9200832.94934082"	"HCD"	"MS2"	"9.983661"	"550.9"	"100.000"	"39.1851"	"10443"	"10443"	"10422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"989.6"	""	"624.3"	""	"720.4"	""	"662.6"	"30.6"	"1153.0"	"1042.8"	""	"933"	"7"	"36.000"	"29.000"	"9.95065451982878"	"13"	"0.0003571"	"0.001516"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DKDNFWMTR"	"[K].dkDNFWMTR.[Q]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"557.62891"	"1670.87217"	"1670.87248"	"-0.19"	"-0.00011"	"4/92"	"4"	"92"	"8044474.68609619"	"HCD"	"MS2"	"12.23588"	"469.4"	"100.000"	"39.2967"	"10532"	"10532"	"10510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"843.8"	""	"536.6"	""	"594.6"	""	"565.0"	"18.0"	"994.7"	"899.0"	""	"924"	"8"	"36.000"	"29.000"	"8.14032933442173"	"13"	"0.0002277"	"0.001272"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLFPANYVELR"	"[R].yGLFPANYVELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"557.63977"	"1670.90476"	"1670.91036"	"-3.35"	"-0.00187"	"7/98"	"7"	"98"	"1837196.11968994"	"HCD"	"MS2"	"29.55591"	"57.5"	"100.000"	"65.7394"	"21297"	"21297"	"21267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.5"	""	"87.1"	""	"92.5"	""	"98.8"	"0.4"	"86.9"	"96.6"	""	"993"	"8"	"36.000"	"29.000"	"8.66800698925031"	"19"	"0.000523"	"0.002898"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLFPANYVELR"	"[R].yGLFPANYVELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"835.95776"	"1670.90825"	"1670.91036"	"-1.26"	"-0.00105"	"7/98"	"7"	"98"	"4292983.43658447"	"HCD"	"MS2"	"51.83179"	"303.2"	"100.000"	"65.5551"	"21221"	"21221"	"21203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"336.9"	""	"354.7"	""	"355.7"	""	"696.9"	""	"586.5"	"547.0"	""	"992"	"23"	"36.000"	"29.000"	"0.245178100745471"	"15"	"0"	"2.201E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLFPANYVELR"	"[R].yGLFPANYVELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"835.95862"	"1670.90996"	"1670.91036"	"-0.24"	"-0.00020"	"10/98"	"10"	"98"	"3265747.24108887"	"HCD"	"MS2"	"42.12432"	"217.3"	"100.000"	"65.6207"	"21195"	"21195"	"21177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"277.5"	""	"276.9"	""	"299.8"	""	"408.5"	"1.0"	"390.1"	"405.8"	""	"997"	"43"	"36.000"	"29.000"	"0.0027018744386521"	"20"	"0"	"8.251E-06"	"1.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQYTDK"	"[R].lVQAFQYTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"835.97729"	"1670.94731"	"1670.95178"	"-2.67"	"-0.00223"	"5/88"	"5"	"88"	"686825.661193848"	"HCD"	"MS2"	"25.13436"	"69.6"	"100.000"	"60.0182"	"18961"	"18961"	"18932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.4"	""	"87.6"	""	"93.7"	""	"118.6"	"0.2"	"131.3"	"129.7"	""	"895"	"13"	"36.000"	"29.000"	"2.15175608431254"	"16"	"0.0006037"	"0.005638"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQYTDK"	"[R].lVQAFQYTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"835.97821"	"1670.94914"	"1670.95178"	"-1.58"	"-0.00132"	"9/88"	"9"	"88"	"1605326.48443604"	"HCD"	"MS2"	"36.56631"	"139.9"	"100.000"	"50.9956"	"15245"	"15245"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.9"	""	"211.6"	""	"199.9"	""	"243.2"	""	"251.3"	"241.7"	""	"876"	"30"	"36.000"	"29.000"	"0.0478050867364555"	"22"	"0"	"0.0001759"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQYTDK"	"[R].lVQAFQYTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"835.97882"	"1670.95036"	"1670.95178"	"-0.85"	"-0.00071"	"9/88"	"9"	"88"	"1413340.97521973"	"HCD"	"MS2"	"21.0352"	"118.5"	"100.000"	"51.1454"	"15356"	"15356"	"15334"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.2"	""	"185.6"	""	"167.7"	""	"184.8"	""	"220.0"	"208.9"	""	"855"	"33"	"36.000"	"29.000"	"0.0217738947376951"	"21"	"0"	"4.213E-05"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQYTDK"	"[R].lVQAFQYTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"835.97949"	"1670.95171"	"1670.95178"	"-0.04"	"-0.00004"	"7/88"	"7"	"88"	"318594.690307617"	"HCD"	"MS2"	"0"	"37.1"	"100.000"	"60.2029"	"18983"	"18983"	"18953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.7"	""	"62.5"	""	"58.3"	""	"59.0"	"0.6"	"58.5"	"61.5"	""	"861"	"9"	"36.000"	"29.000"	"5.35763540367582"	"13"	"0.0009727"	"0.01076"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFWGNAETLK"	"[K].fFWGNAETLk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.97949"	"1670.95171"	"1670.93065"	"12.60"	"0.01053"	"8/84"	"8"	"84"	"2479623.81896973"	"HCD"	"MS2"	"0"	"113.4"	"100.000"	"65.1654"	"21062"	"21062"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.1"	""	"158.4"	""	"154.1"	""	"159.5"	"0.4"	"231.3"	"232.4"	""	"861"	"4"	"36.000"	"29.000"	"16.7098732558974"	"13"	"0.0008731"	"0.008688"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQYTDK"	"[R].lVQAFQYTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"835.98041"	"1670.95354"	"1670.95178"	"1.05"	"0.00088"	"6/88"	"6"	"88"	"605123.490783691"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"59.8825"	"18852"	"18852"	"18825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.3"	""	"92.4"	""	"91.8"	""	"110.7"	""	"107.4"	"114.3"	""	"851"	"24"	"36.000"	"29.000"	"0.164778127914148"	"17"	"0.0008731"	"0.008748"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAFQYTDK"	"[R].lVQAFQYTDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"557.65619"	"1670.95401"	"1670.95178"	"1.34"	"0.00075"	"10/88"	"10"	"88"	"4213577.3036499"	"HCD"	"MS2"	"10.3153"	"123.6"	"100.000"	"51.2237"	"15388"	"15388"	"15366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.1"	""	"163.6"	""	"178.7"	""	"214.7"	"0.8"	"231.5"	"229.5"	""	"839"	"26"	"36.000"	"29.000"	"0.107828103087154"	"14"	"0.0001889"	"0.0005325"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMTLMEYLIK"	"[K].aMTLMEYLIk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88339"	"Epsin-1 OS=Rattus norvegicus OX=10116 GN=Epn1 PE=1 SV=1"	"O88339"	"Epsin-1 OS=Rattus norvegicus OX=10116 GN=Epn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.98370"	"1670.96013"	"1670.96254"	"-1.44"	"-0.00121"	"6/78"	"6"	"78"	"179890.073242188"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"83.1705"	"28389"	"28389"	"28365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.3"	""	"26.4"	""	"25.5"	""	"22.5"	""	"25.6"	"33.5"	""	"812"	"25"	"36.000"	"29.000"	"0.121206534328069"	"14"	"0.000523"	"0.002794"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMTLMEYLIK"	"[K].aMTLMEYLIk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88339"	"Epsin-1 OS=Rattus norvegicus OX=10116 GN=Epn1 PE=1 SV=1"	"O88339"	"Epsin-1 OS=Rattus norvegicus OX=10116 GN=Epn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"835.98572"	"1670.96416"	"1670.96254"	"0.97"	"0.00081"	"7/78"	"7"	"78"	"286661.586914063"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"83.2630"	"28376"	"28376"	"28351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.6"	""	"31.5"	""	"35.8"	""	"33.5"	"2.7"	"34.3"	"39.6"	""	"797"	"24"	"36.000"	"29.000"	"0.178003411472159"	"20"	"0.0001889"	"0.000593"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAFELVYEK"	"[R].lTAFELVYEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"557.66302"	"1670.97452"	"1670.97693"	"-1.44"	"-0.00080"	"7/86"	"7"	"86"	"2736602.81964111"	"HCD"	"MS2"	"0"	"83.1"	"100.000"	"69.6078"	"22867"	"22867"	"22842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.3"	""	"127.5"	""	"128.5"	""	"131.8"	""	"142.7"	"142.4"	""	"743"	"34"	"35.000"	"28.000"	"0.0146540887720966"	"20"	"0.0001889"	"0.0004132"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAFELVYEK"	"[R].lTAFELVYEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"557.66364"	"1670.97635"	"1670.97693"	"-0.35"	"-0.00019"	"6/86"	"6"	"86"	"2741025.65148926"	"HCD"	"MS2"	"45.34297"	"90.3"	"100.000"	"69.7317"	"22866"	"22866"	"22842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.1"	""	"131.1"	""	"131.5"	""	"147.4"	"5.1"	"161.6"	"157.3"	""	"729"	"24"	"35.000"	"28.000"	"0.138579034958845"	"16"	"0.0001889"	"0.0006496"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAFELVYEK"	"[R].lTAFELVYEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.99231"	"1670.97734"	"1670.97693"	"0.25"	"0.00021"	"9/86"	"9"	"86"	"1563847.96081543"	"HCD"	"MS2"	"39.19688"	"129.1"	"100.000"	"69.5964"	"22862"	"22862"	"22842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.5"	""	"197.5"	""	"186.2"	""	"203.7"	""	"218.1"	"259.4"	""	"717"	"29"	"35.000"	"28.000"	"0.0490330783976112"	"14"	"0"	"6.857E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAFELVYEK"	"[R].lTAFELVYEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"835.99243"	"1670.97759"	"1670.97693"	"0.39"	"0.00033"	"9/86"	"9"	"86"	"1620661.08654785"	"HCD"	"MS2"	"49.92817"	"135.0"	"100.000"	"69.7272"	"22864"	"22864"	"22842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.5"	""	"201.1"	""	"205.2"	""	"210.3"	""	"257.5"	"235.5"	""	"717"	"26"	"35.000"	"28.000"	"0.0927874330082384"	"16"	"0"	"0.0001253"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGVPLPIGMVK"	"[K].aDGVPLPIGmVk.[S]"	"N-Term(TMT6plex); M10(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"557.66864"	"1670.99137"	"1670.99154"	"-0.10"	"-0.00006"	"12/88"	"12"	"88"	"2996377.74304199"	"HCD"	"MS2"	"18.05087"	"97.6"	"100.000"	"52.7313"	"16005"	"16005"	"15974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"129.1"	""	"121.1"	""	"131.6"	""	"167.0"	"4.8"	"184.0"	"187.9"	""	"612"	"21"	"34.000"	"27.000"	"0.235353914727703"	"14"	"0.0001889"	"0.0003894"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGLFPANYVELR"	"[R].yGLFPAnYVELR.[Q]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.45911"	"1671.91094"	"1671.89437"	"9.91"	"0.00828"	"8/98"	"8"	"98"	"2159960.41894531"	"HCD"	"MS2"	"29.05464"	"155.9"	"100.000"	"65.6083"	"21243"	"21243"	"21219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.2"	""	"194.8"	""	"200.1"	""	"327.2"	""	"307.7"	"284.3"	""	"950"	"33"	"36.000"	"29.000"	"0.0223199701587477"	"15"	"0.00109"	"0.01506"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHIIDDVISFIR"	"[R].dHIIDDVISFIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"557.97968"	"1671.92447"	"1671.92674"	"-1.35"	"-0.00075"	"9/104"	"9"	"104"	"2529298.93444824"	"HCD"	"MS2"	"20.5243"	"29.2"	"100.000"	"74.1050"	"24651"	"24651"	"24625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.6"	""	"39.3"	""	"40.2"	""	"47.8"	""	"62.2"	"59.1"	""	"950"	"40"	"36.000"	"29.000"	"0.0043220880450032"	"20"	"0"	"2.058E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPSVWAAVPGK"	"[K].dSPSVWAAVPGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"557.98663"	"1671.94535"	"1671.94703"	"-1.01"	"-0.00056"	"14/94"	"14"	"94"	"19571816.5470581"	"HCD"	"MS2"	"20.59367"	"485.9"	"100.000"	"48.8050"	"14406"	"14406"	"14383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"774.0"	""	"705.8"	""	"697.8"	""	"715.1"	""	"871.4"	"841.8"	""	"945"	"36"	"36.000"	"29.000"	"0.0112047407592513"	""	"0"	"5.383E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPSVWAAVPGK"	"[K].dSPSVWAAVPGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"836.47632"	"1671.94536"	"1671.94703"	"-1.00"	"-0.00083"	"8/94"	"8"	"94"	"1804862.59057617"	"HCD"	"MS2"	"0"	"110.2"	"100.000"	"49.1087"	"14530"	"14530"	"14511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.3"	""	"155.9"	""	"160.0"	""	"167.9"	""	"194.6"	"194.9"	""	"945"	"61"	"36.000"	"29.000"	"3.3759951407068E-05"	"27"	"0"	"2.479E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQSNFAVGYK"	"[R].vTQSNFAVGYk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"836.47650"	"1671.94573"	"1671.94703"	"-0.78"	"-0.00065"	"9/100"	"9"	"100"	"1778190.41467285"	"HCD"	"MS2"	"0"	"151.3"	"100.000"	"41.0477"	"11204"	"11204"	"11173"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.9"	""	"275.5"	""	"254.2"	""	"204.4"	"1.8"	"226.1"	"290.4"	""	"944"	"59"	"36.000"	"29.000"	"6.3671048058326E-05"	"23"	"0"	"5.907E-06"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPSVWAAVPGK"	"[K].dSPSVWAAVPGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"836.47662"	"1671.94597"	"1671.94703"	"-0.63"	"-0.00053"	"11/94"	"11"	"94"	"2323115.4196167"	"HCD"	"MS2"	"0"	"140.9"	"100.000"	"48.8037"	"14358"	"14358"	"14335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"207.2"	""	"191.1"	""	"202.2"	""	"209.4"	""	"259.8"	"265.3"	""	"963"	"56"	"36.000"	"29.000"	"0.000125486293432447"	"27"	"0"	"3.042E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPSVWAAVPGK"	"[K].dSPSVWAAVPGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.6304"	"0.0000"	"1"	"1"	"1"	"557.98718"	"1671.94699"	"1671.94703"	"-0.02"	"-0.00001"	"13/94"	"13"	"94"	"21099041.0845947"	"HCD"	"MS2"	"15.82145"	"485.2"	"100.000"	"48.5302"	"14246"	"14246"	"14224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"776.5"	""	"703.5"	""	"699.0"	""	"736.3"	"0.5"	"858.3"	"817.4"	""	"957"	"46"	"36.000"	"29.000"	"0.00126730731632331"	""	"0"	"6.192E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPSVWAAVPGK"	"[K].dSPSVWAAVPGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"836.47729"	"1671.94731"	"1671.94703"	"0.17"	"0.00014"	"12/94"	"12"	"94"	"3771846.99169922"	"HCD"	"MS2"	"100"	"215.0"	"100.000"	"48.5049"	"14236"	"14236"	"14208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"335.0"	""	"316.1"	""	"303.4"	""	"316.8"	""	"404.6"	"361.1"	""	"954"	"42"	"36.000"	"29.000"	"0.00306562041160218"	"25"	"0.0001308"	"0.0002939"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPSVWAAVPGK"	"[K].dSPSVWAAVPGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"836.47760"	"1671.94792"	"1671.94703"	"0.54"	"0.00045"	"15/94"	"15"	"94"	"3300394.16638184"	"HCD"	"MS2"	"0"	"178.8"	"100.000"	"48.7843"	"14398"	"14398"	"14367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"293.8"	""	"262.2"	""	"250.9"	""	"260.5"	"1.2"	"319.1"	"304.5"	""	"942"	"53"	"36.000"	"29.000"	"0.000225434773483963"	"27"	"0"	"3.245E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPWPPAFEK"	"[K].eLPWPPAFEk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.47974"	"1671.95220"	"1671.95105"	"0.69"	"0.00057"	"7/88"	"7"	"88"	"1053028.92431641"	"HCD"	"MS2"	"21.52354"	"74.3"	"100.000"	"67.9947"	"22208"	"22208"	"22186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.2"	""	"112.6"	""	"103.0"	""	"115.5"	""	"128.5"	"133.4"	""	"971"	"20"	"36.000"	"29.000"	"0.457287399111839"	"14"	"0.0001889"	"0.0009115"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPWPPAFEK"	"[K].eLPWPPAFEk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"836.47992"	"1671.95256"	"1671.95105"	"0.90"	"0.00076"	"7/88"	"7"	"88"	"1287515.24163818"	"HCD"	"MS2"	"47.51824"	"76.0"	"100.000"	"68.1645"	"22226"	"22226"	"22202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.9"	""	"92.0"	""	"95.4"	""	"111.8"	""	"174.7"	"150.0"	""	"965"	"12"	"36.000"	"29.000"	"3.00952058120267"	"23"	"0.0003839"	"0.002033"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDGIPPPYDK"	"[K].vLDGIPPPYDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.49017"	"1671.97307"	"1671.97218"	"0.53"	"0.00045"	"11/94"	"11"	"94"	"1086572.87316895"	"HCD"	"MS2"	"0"	"63.7"	"100.000"	"52.9659"	"16101"	"16101"	"16070"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.3"	""	"88.6"	""	"82.5"	""	"100.9"	"3.8"	"122.9"	"116.5"	""	"819"	"36"	"36.000"	"29.000"	"0.0108456080675944"	"15"	"0.0001889"	"0.0009264"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDGIPPPYDK"	"[K].vLDGIPPPYDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"836.49091"	"1671.97453"	"1671.97218"	"1.41"	"0.00118"	"4/94"	"4"	"94"	"2071512.25457764"	"HCD"	"MS2"	"8.680009"	"154.0"	"100.000"	"52.8414"	"16000"	"16000"	"15970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"225.0"	""	"220.3"	""	"178.8"	""	"290.5"	""	"267.0"	"277.4"	""	"831"	"7"	"36.000"	"29.000"	"8.94480810777978"	"16"	"0.002711"	"0.04233"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTIAIQGAIEK"	"[K].lGTIAIQGAIEk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"558.01886"	"1672.04203"	"1672.04093"	"0.66"	"0.00037"	"8/114"	"8"	"114"	"3897105.64794922"	"HCD"	"MS2"	"25.71733"	"138.5"	"100.000"	"55.9017"	"17284"	"17284"	"17253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.1"	""	"166.9"	""	"167.9"	""	"214.2"	""	"291.5"	"328.5"	""	"374"	"23"	"32.000"	"25.000"	"0.101354166505104"	"21"	"0"	"0.0001593"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTIAIQGAIEK"	"[K].lGTIAIQGAIEk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"558.01904"	"1672.04258"	"1672.04093"	"0.99"	"0.00055"	"10/114"	"10"	"114"	"4508110.60992432"	"HCD"	"MS2"	"30.62238"	"156.4"	"100.000"	"55.6771"	"17138"	"17138"	"17115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.2"	""	"197.5"	""	"190.3"	""	"252.1"	""	"302.8"	"348.3"	""	"374"	"34"	"32.000"	"25.000"	"0.00722506247091109"	""	"0"	"7.585E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGPGRPTGSK"	"[K].kGPGRPTGSk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52925"	"High mobility group protein B2 OS=Rattus norvegicus OX=10116 GN=Hmgb2 PE=2 SV=2"	"P52925"	"High mobility group protein B2 OS=Rattus norvegicus OX=10116 GN=Hmgb2 PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.01990"	"1672.04514"	"1672.04730"	"-1.29"	"-0.00072"	"6/94"	"6"	"94"	"2221821.92889404"	"HCD"	"MS2"	"0"	"89.0"	"100.000"	"21.6186"	"3363"	"3363"	"3338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.1"	""	"150.9"	""	"144.8"	""	"139.0"	""	"117.1"	"111.6"	""	"365"	"2"	"32.000"	"25.000"	"11.8103527374116"	"13"	"0.003045"	"0.05861"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGPGRPTGSK"	"[K].kGPGRPTGSk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52925"	"High mobility group protein B2 OS=Rattus norvegicus OX=10116 GN=Hmgb2 PE=2 SV=2"	"P52925"	"High mobility group protein B2 OS=Rattus norvegicus OX=10116 GN=Hmgb2 PE=2 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"418.76685"	"1672.04555"	"1672.04730"	"-1.04"	"-0.00044"	"7/94"	"7"	"94"	"10834562.1131592"	"HCD"	"MS2"	"11.5234"	"793.9"	"100.000"	"21.6760"	"3385"	"3385"	"3374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1416.9"	""	"1310.1"	""	"1395.5"	""	"1232.9"	"11.9"	"1120.7"	"996.8"	""	"366"	"15"	"32.000"	"25.000"	"0.552651164833568"	"13"	"0.004346"	"0.1188"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.02008"	"1672.04569"	"1672.04832"	"-1.57"	"-0.00088"	"10/94"	"10"	"94"	"289513.833740234"	"HCD"	"MS2"	"22.90205"	"11.4"	"100.000"	"84.1728"	"28747"	"28747"	"28724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.4"	""	"15.3"	""	"15.3"	""	"17.8"	""	"22.3"	"21.5"	""	"366"	"23"	"32.000"	"25.000"	"0.0890125186415374"	"14"	"0.0001308"	"0.0002429"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"558.02014"	"1672.04587"	"1672.04832"	"-1.47"	"-0.00082"	"9/94"	"9"	"94"	"1359828.54516602"	"HCD"	"MS2"	"8.735504"	"38.8"	"100.000"	"83.2561"	"28373"	"28373"	"28351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.6"	""	"57.8"	""	"59.5"	""	"63.7"	""	"71.8"	"66.6"	""	"366"	"41"	"32.000"	"25.000"	"0.00150124332612357"	"21"	"0.0001308"	"0.0002583"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGPGRPTGSK"	"[K].kGPGRPTGSk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52925"	"High mobility group protein B2 OS=Rattus norvegicus OX=10116 GN=Hmgb2 PE=2 SV=2"	"P52925"	"High mobility group protein B2 OS=Rattus norvegicus OX=10116 GN=Hmgb2 PE=2 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"418.76700"	"1672.04616"	"1672.04730"	"-0.68"	"-0.00028"	"7/94"	"7"	"94"	"9886689.14868164"	"HCD"	"MS2"	"16.00432"	"725.8"	"100.000"	"21.6341"	"3401"	"3401"	"3389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1320.1"	""	"1166.0"	""	"1222.8"	""	"1157.5"	""	"1018.3"	"959.1"	""	"366"	"13"	"32.000"	"25.000"	"0.824994569310871"	"13"	"0.006845"	"0.2565"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"836.52673"	"1672.04619"	"1672.04832"	"-1.27"	"-0.00107"	"10/94"	"10"	"94"	"949550.16619873"	"HCD"	"MS2"	"26.45696"	"55.4"	"100.000"	"83.2886"	"28386"	"28386"	"28366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.8"	""	"72.9"	"2.0"	"75.2"	""	"85.3"	"0.4"	"103.5"	"105.4"	""	"366"	"36"	"32.000"	"25.000"	"0.0045651083503056"	"18"	"0"	"9.729E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"836.52679"	"1672.04631"	"1672.04832"	"-1.20"	"-0.00100"	"14/94"	"14"	"94"	"959078.433776855"	"HCD"	"MS2"	"29.01728"	"59.5"	"100.000"	"83.3178"	"28449"	"28449"	"28429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.6"	""	"88.0"	""	"92.4"	""	"92.6"	""	"107.7"	"102.3"	""	"366"	"26"	"32.000"	"25.000"	"0.0424083220944231"	"16"	"0.0001889"	"0.0004632"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"558.02032"	"1672.04642"	"1672.04832"	"-1.14"	"-0.00063"	"12/94"	"12"	"94"	"1432623.08044434"	"HCD"	"MS2"	"4.077209"	"38.4"	"100.000"	"83.9165"	"28694"	"28694"	"28677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.0"	""	"55.1"	""	"63.2"	""	"52.8"	"0.7"	"67.3"	"73.9"	""	"366"	"36"	"32.000"	"25.000"	"0.00424083220944231"	"16"	"0"	"0.0001338"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"836.52692"	"1672.04656"	"1672.04832"	"-1.06"	"-0.00088"	"9/94"	"9"	"94"	"478776.958740234"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"83.9232"	"28696"	"28696"	"28677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.8"	""	"41.3"	""	"42.9"	""	"44.9"	"1.7"	"54.1"	"55.0"	""	"366"	"48"	"32.000"	"25.000"	"0.000303704404061073"	"19"	"0"	"3.092E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"558.02039"	"1672.04660"	"1672.04832"	"-1.03"	"-0.00057"	"13/94"	"13"	"94"	"2283380.51538086"	"HCD"	"MS2"	"11.9664"	"59.1"	"100.000"	"83.3222"	"28451"	"28451"	"28429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.9"	""	"76.7"	""	"96.3"	""	"85.0"	"0.9"	"114.5"	"98.1"	""	"366"	"36"	"32.000"	"25.000"	"0.0042506083373335"	"16"	"0"	"6.748E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"836.52728"	"1672.04729"	"1672.04832"	"-0.62"	"-0.00052"	"10/94"	"10"	"94"	"5279631.53204346"	"HCD"	"MS2"	"4.745315"	"262.1"	"100.000"	"83.5878"	"28509"	"28509"	"28492"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"406.8"	""	"359.6"	""	"386.0"	""	"405.3"	"2.4"	"426.6"	"493.7"	""	"366"	"56"	"32.000"	"25.000"	"5.11035522946432E-05"	""	"0"	"2.303E-05"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"836.52728"	"1672.04729"	"1672.04832"	"-0.62"	"-0.00052"	"10/94"	"10"	"94"	"5356593.53765869"	"HCD"	"MS2"	"1.660225"	"265.4"	"100.000"	"83.6215"	"28573"	"28573"	"28555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"410.5"	""	"360.9"	""	"371.8"	""	"405.5"	"1.2"	"462.9"	"499.9"	""	"366"	"58"	"32.000"	"25.000"	"2.65125249198691E-05"	"23"	"0"	"2.282E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"836.52740"	"1672.04753"	"1672.04832"	"-0.47"	"-0.00039"	"17/94"	"17"	"94"	"434904.159484863"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"83.8938"	"28633"	"28633"	"28612"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.2"	""	"35.8"	""	"35.2"	""	"40.0"	"2.2"	"57.0"	"56.7"	""	"359"	"54"	"32.000"	"25.000"	"7.65710236248858E-05"	"20"	"0"	"1.083E-05"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"558.02081"	"1672.04789"	"1672.04832"	"-0.26"	"-0.00015"	"13/94"	"13"	"94"	"12816826.842041"	"HCD"	"MS2"	"3.297186"	"243.9"	"78.731"	"83.5486"	"28493"	"28493"	"28476"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.9"	""	"326.9"	""	"355.0"	""	"396.4"	"1.5"	"421.6"	"443.6"	""	"359"	"46"	"32.000"	"25.000"	"0.000409321401924075"	"18"	"0"	"8.386E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"558.02100"	"1672.04844"	"1672.04832"	"0.07"	"0.00004"	"10/94"	"10"	"94"	"1765059.85449219"	"HCD"	"MS2"	"4.176756"	"49.0"	"100.000"	"83.8500"	"28615"	"28615"	"28596"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.2"	""	"61.4"	""	"72.5"	""	"75.2"	"1.2"	"94.0"	"91.9"	""	"356"	"41"	"32.000"	"25.000"	"0.00144019070053752"	"18"	"0"	"3.759E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAMk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"558.02112"	"1672.04880"	"1672.04832"	"0.29"	"0.00016"	"11/94"	"11"	"94"	"12593418.1897583"	"HCD"	"MS2"	"3.951638"	"215.6"	"72.525"	"83.6171"	"28572"	"28572"	"28555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"325.3"	""	"302.1"	""	"314.8"	""	"341.6"	""	"366.4"	"391.2"	""	"357"	"45"	"32.000"	"25.000"	"0.000578946216968588"	"18"	"0"	"3.783E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPSITTEILK"	"[R].vLPSITTEILk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.9701"	"0.0000"	"1"	"1"	"1"	"836.53601"	"1672.06474"	"1672.06608"	"-0.80"	"-0.00067"	"10/88"	"10"	"88"	"2237337.07159424"	"HCD"	"MS2"	"14.42051"	"128.3"	"100.000"	"69.2905"	"22737"	"22737"	"22714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.7"	""	"193.8"	""	"183.1"	""	"209.5"	"0.9"	"227.8"	"253.1"	""	"256"	"67"	"31.000"	"24.000"	"2.83929141734428E-06"	"19"	"0"	"6.247E-06"	"1.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLIEVLVTK"	"[R].aLDLIEVLVTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"836.53607"	"1672.06487"	"1672.06608"	"-0.73"	"-0.00061"	"4/94"	"4"	"94"	"82450.1174926758"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"93.0653"	"32117"	"32117"	"32107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"3.2"	""	"2.8"	""	"11.6"	""	"5.6"	"9.9"	""	"256"	"16"	"31.000"	"24.000"	"0.350921494006769"	"21"	"0.004346"	"0.1153"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLIEVLVTK"	"[R].aLDLIEVLVTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.53625"	"1672.06523"	"1672.06608"	"-0.51"	"-0.00042"	"4/94"	"4"	"94"	"73503.9852905273"	"HCD"	"MS2"	"22.51387"	"4.7"	"100.000"	"92.9207"	"32045"	"32045"	"32035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.3"	""	"6.2"	""	"4.6"	""	"7.3"	""	"9.1"	"10.3"	""	"256"	"15"	"31.000"	"24.000"	"0.43372051985818"	"14"	"0.002981"	"0.05759"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPSITTEILK"	"[R].vLPSITTEILk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.9589"	"0.0000"	"1"	"1"	"1"	"836.53644"	"1672.06560"	"1672.06608"	"-0.29"	"-0.00024"	"10/88"	"10"	"88"	"2358694.55480957"	"HCD"	"MS2"	"6.107121"	"140.0"	"100.000"	"69.4442"	"22748"	"22748"	"22730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.5"	""	"202.7"	""	"207.1"	""	"219.1"	"0.2"	"247.9"	"289.5"	""	"253"	"73"	"31.000"	"24.000"	"5.95786317892146E-07"	"20"	"0"	"1.155E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPSITTEILK"	"[R].vLPSITTEILk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"3"	"3"	"0.7174"	"0.0000"	"1"	"1"	"1"	"558.02673"	"1672.06565"	"1672.06608"	"-0.26"	"-0.00014"	"12/88"	"12"	"88"	"5555219.0145874"	"HCD"	"MS2"	"8.120575"	"125.4"	"100.000"	"69.5640"	"22797"	"22797"	"22778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.8"	""	"178.9"	""	"179.7"	""	"219.7"	""	"220.5"	"258.2"	""	"253"	"46"	"31.000"	"24.000"	"0.000308383068523647"	""	"0"	"5.455E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPSITTEILK"	"[R].vLPSITTEILk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"3"	"3"	"0.7292"	"0.0000"	"1"	"1"	"1"	"558.02698"	"1672.06638"	"1672.06608"	"0.18"	"0.00010"	"12/88"	"12"	"88"	"5738955.43688965"	"HCD"	"MS2"	"8.524055"	"130.8"	"100.000"	"69.4059"	"22784"	"22784"	"22762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.3"	""	"188.9"	""	"192.9"	""	"226.2"	""	"212.2"	"274.0"	""	"255"	"48"	"31.000"	"24.000"	"0.000213064053324615"	""	"0"	"5.781E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIVYLPCIYR"	"[R].eEIVYLPcIYR.[N]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"836.93475"	"1672.86223"	"1672.86400"	"-1.06"	"-0.00089"	"8/82"	"8"	"82"	"992224.302978516"	"HCD"	"MS2"	"3.981475"	"55.5"	"100.000"	"75.2512"	"25170"	"25170"	"25151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.8"	""	"109.2"	""	"94.8"	""	"65.8"	"0.7"	"83.9"	"71.5"	""	"894"	"49"	"36.000"	"29.000"	"0.000516782172259869"	"21"	"0.0001308"	"0.0002289"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIVYLPCIYR"	"[R].eEIVYLPcIYR.[N]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"836.93530"	"1672.86333"	"1672.86400"	"-0.40"	"-0.00034"	"7/82"	"7"	"82"	"1018613.76599121"	"HCD"	"MS2"	"8.444548"	"60.4"	"100.000"	"75.2683"	"25125"	"25125"	"25105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.8"	""	"113.5"	""	"104.4"	""	"75.4"	"1.1"	"79.8"	"89.5"	""	"886"	"47"	"36.000"	"29.000"	"0.000883901205531214"	"22"	"0"	"3.306E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYIMDFQVGK"	"[R].nYIMDFQVGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"836.95996"	"1672.91265"	"1672.91328"	"-0.38"	"-0.00032"	"7/90"	"7"	"90"	"1319553.67614746"	"HCD"	"MS2"	"0"	"119.6"	"100.000"	"58.0876"	"18177"	"18177"	"18149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.4"	""	"156.4"	""	"179.7"	""	"148.8"	""	"242.9"	"295.8"	""	"1032"	"32"	"37.000"	"30.000"	"0.0350469074430467"	"19"	"0"	"0.0001221"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYIMDFQVGK"	"[R].nYIMDFQVGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"836.96155"	"1672.91582"	"1672.91328"	"1.52"	"0.00127"	"18/90"	"18"	"90"	"960451.729309082"	"HCD"	"MS2"	"0"	"95.1"	"100.000"	"57.8794"	"18038"	"18038"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.8"	""	"123.9"	""	"138.2"	""	"119.3"	"2.8"	"195.8"	"219.0"	""	"1036"	"62"	"37.000"	"30.000"	"2.9466581817711E-05"	"20"	"0"	"1.544E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQYYDISAK"	"[K].nLQYYDISAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"836.96741"	"1672.92754"	"1672.93104"	"-2.10"	"-0.00175"	"11/94"	"11"	"94"	"263023.725463867"	"HCD"	"MS2"	"0"	"26.7"	"100.000"	"45.3979"	"13018"	"13018"	"12987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.1"	""	"38.2"	""	"32.9"	""	"41.0"	""	"39.0"	"50.0"	""	"1007"	"31"	"37.000"	"30.000"	"0.0383706781547795"	"16"	"0.0001889"	"0.0004067"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQYYDISAK"	"[K].nLQYYDISAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"836.96857"	"1672.92986"	"1672.93104"	"-0.71"	"-0.00059"	"8/94"	"8"	"94"	"2791156.08148193"	"HCD"	"MS2"	"0"	"228.9"	"100.000"	"45.0780"	"12887"	"12887"	"12859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"443.6"	""	"320.4"	""	"324.3"	""	"348.8"	"1.2"	"383.2"	"340.9"	""	"997"	"64"	"36.000"	"29.000"	"2.13631437418123E-05"	"24"	"0"	"2.06E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQYYDISAK"	"[K].nLQYYDISAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"836.96912"	"1672.93096"	"1672.93104"	"-0.05"	"-0.00004"	"16/94"	"16"	"94"	"2395443.65118408"	"HCD"	"MS2"	"0"	"202.1"	"100.000"	"44.8253"	"12735"	"12735"	"12704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.1"	""	"302.2"	""	"301.7"	""	"307.4"	""	"328.5"	"299.1"	""	"1019"	"51"	"37.000"	"30.000"	"0.000450966403208811"	"19"	"0"	"3.01E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDYYATLLK"	"[K].dLDYYATLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"558.32178"	"1672.95078"	"1672.95620"	"-3.24"	"-0.00181"	"10/84"	"10"	"84"	"2713956.40551758"	"HCD"	"MS2"	"38.37719"	"67.6"	"100.000"	"70.3087"	"23101"	"23101"	"23075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.9"	""	"84.1"	""	"93.1"	""	"114.5"	"0.9"	"121.4"	"122.3"	""	"922"	"37"	"36.000"	"29.000"	"0.00987872567116347"	"20"	"0.0001859"	"0.0003168"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDYYATLLK"	"[K].dLDYYATLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"836.97968"	"1672.95207"	"1672.95620"	"-2.46"	"-0.00206"	"16/84"	"16"	"84"	"1344796.27032471"	"HCD"	"MS2"	"0"	"112.3"	"100.000"	"70.2658"	"23135"	"23135"	"23114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.1"	""	"141.7"	""	"152.4"	""	"205.1"	"1.4"	"191.7"	"211.6"	""	"894"	"54"	"36.000"	"29.000"	"0.00018634061441124"	"25"	"0"	"1.879E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDYYATLLK"	"[K].dLDYYATLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"836.98047"	"1672.95366"	"1672.95620"	"-1.51"	"-0.00127"	"8/84"	"8"	"84"	"1199999.42547607"	"HCD"	"MS2"	"14.53247"	"109.4"	"100.000"	"70.3781"	"23129"	"23129"	"23107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.1"	""	"126.2"	""	"134.6"	""	"208.7"	""	"198.0"	"216.0"	""	"904"	"30"	"36.000"	"29.000"	"0.0453041967611211"	"23"	"0"	"9.045E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDYYATLLK"	"[K].dLDYYATLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"558.32361"	"1672.95627"	"1672.95620"	"0.05"	"0.00003"	"10/84"	"10"	"84"	"2501681.51812744"	"HCD"	"MS2"	"37.05027"	"62.2"	"100.000"	"70.1710"	"23097"	"23097"	"23066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.8"	""	"71.2"	""	"76.2"	""	"121.3"	"1.9"	"107.7"	"114.1"	""	"865"	"38"	"36.000"	"29.000"	"0.00650108900333935"	"23"	"0.0001889"	"0.0005246"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDYYATLLK"	"[K].dLDYYATLLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"558.32385"	"1672.95700"	"1672.95620"	"0.48"	"0.00027"	"7/84"	"7"	"84"	"655334.99041748"	"HCD"	"MS2"	"29.66475"	"31.5"	"100.000"	"70.6340"	"23234"	"23234"	"23203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.1"	""	"43.3"	""	"49.7"	""	"55.5"	"0.9"	"45.6"	"63.3"	""	"868"	"27"	"36.000"	"29.000"	"0.0787933797643541"	"20"	"0.0001889"	"0.0004933"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IESILMSLPLTAR"	"[R].iESILMSLPLTAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"558.33301"	"1672.98447"	"1672.98689"	"-1.45"	"-0.00081"	"11/114"	"11"	"114"	"359033.24987793"	"HCD"	"MS2"	"16.61975"	"7.2"	"100.000"	"86.6804"	"29812"	"29812"	"29785"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.4"	""	"8.7"	""	"11.6"	""	"10.2"	""	"13.0"	"17.4"	""	"759"	"28"	"35.000"	"28.000"	"0.0665597650448948"	"23"	"0"	"0.0001619"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IESILMSLPLTAR"	"[R].iESILMSLPLTAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"558.33344"	"1672.98575"	"1672.98689"	"-0.68"	"-0.00038"	"14/114"	"14"	"114"	"438737.458496094"	"HCD"	"MS2"	"20.74334"	"7.1"	"100.000"	"86.6613"	"29752"	"29752"	"29732"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"10.5"	""	"7.8"	""	"11.2"	""	"16.8"	"15.9"	""	"755"	"36"	"35.000"	"28.000"	"0.0097480322196456"	"22"	"0"	"1.646E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IESILMSLPLTAR"	"[R].iESILMSLPLTAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"836.99658"	"1672.98589"	"1672.98689"	"-0.60"	"-0.00050"	"6/114"	"6"	"114"	"172879.687744141"	"HCD"	"MS2"	"9.47802"	"9.7"	"100.000"	"86.7059"	"29822"	"29822"	"29801"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.7"	""	"10.1"	""	"14.4"	""	"15.0"	""	"18.0"	"19.3"	""	"755"	"35"	"35.000"	"28.000"	"0.0113740977413026"	"18"	"0"	"8.617E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IESILMSLPLTAR"	"[R].iESILMSLPLTAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"Q3B7D0"	"Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpox PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.99664"	"1672.98601"	"1672.98689"	"-0.53"	"-0.00044"	"7/114"	"7"	"114"	"143494.308532715"	"HCD"	"MS2"	"9.752681"	"8.4"	"100.000"	"86.6659"	"29754"	"29754"	"29732"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.3"	""	"8.4"	""	"10.0"	""	"16.8"	""	"15.5"	"17.3"	""	"755"	"30"	"35.000"	"28.000"	"0.0353115641990701"	"14"	"0.0001308"	"0.0003068"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQEMFAWK"	"[K].lYQEMFAWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"558.64142"	"1673.90970"	"1673.91256"	"-1.71"	"-0.00095"	"7/76"	"7"	"76"	"1684493.24957275"	"HCD"	"MS2"	"0"	"52.5"	"100.000"	"71.8366"	"23725"	"23725"	"23699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.6"	""	"76.9"	""	"81.0"	""	"78.4"	""	"86.8"	"107.9"	""	"1020"	"35"	"37.000"	"30.000"	"0.014913177127001"	"19"	"0.0001308"	"0.0002351"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQEMFAWK"	"[K].lYQEMFAWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.64148"	"1673.90989"	"1673.91256"	"-1.60"	"-0.00089"	"9/76"	"9"	"76"	"1796764.9854126"	"HCD"	"MS2"	"15.91342"	"57.3"	"100.000"	"71.7682"	"23749"	"23749"	"23722"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.5"	""	"89.7"	""	"94.5"	""	"75.6"	"2.4"	"98.2"	"110.0"	""	"1022"	"22"	"37.000"	"30.000"	"0.328413423548997"	"14"	"0.0004166"	"0.00212"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQEMFAWK"	"[K].lYQEMFAWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"837.45905"	"1673.91081"	"1673.91256"	"-1.04"	"-0.00087"	"7/76"	"7"	"76"	"1082183.56732178"	"HCD"	"MS2"	"0"	"100.8"	"100.000"	"71.8964"	"23749"	"23749"	"23731"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.5"	"2.8"	"146.6"	""	"155.5"	""	"151.9"	""	"179.2"	"185.6"	""	"1005"	"27"	"37.000"	"30.000"	"0.107680252706283"	"23"	"7.476E-05"	"0.0001925"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQEMFAWK"	"[K].lYQEMFAWk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"837.45923"	"1673.91118"	"1673.91256"	"-0.82"	"-0.00069"	"8/76"	"8"	"76"	"891545.740539551"	"HCD"	"MS2"	"0"	"84.8"	"100.000"	"71.7246"	"23731"	"23731"	"23706"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.4"	""	"127.2"	""	"119.1"	""	"118.1"	""	"151.3"	"170.4"	""	"1010"	"63"	"37.000"	"30.000"	"2.35120977229094E-05"	"29"	"0"	"2.419E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVIGGPQGDAGLTGR"	"[R].fVIGGPQGDAGLTGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"837.46100"	"1673.91472"	"1673.91723"	"-1.50"	"-0.00126"	"8/136"	"8"	"136"	"671902.617004395"	"HCD"	"MS2"	"27.50425"	"54.0"	"100.000"	"48.5867"	"14317"	"14317"	"14287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.6"	""	"74.6"	""	"67.4"	""	"92.3"	"0.3"	"102.1"	"98.2"	""	"1028"	"6"	"37.000"	"30.000"	"12.6462894853188"	"16"	"0.0001889"	"0.001051"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQWVGDPSWK"	"[R].iQWVGDPSWk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06907"	"Myelin protein P0 OS=Rattus norvegicus OX=10116 GN=Mpz PE=1 SV=1"	"P06907"	"Myelin protein P0 OS=Rattus norvegicus OX=10116 GN=Mpz PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.65063"	"1673.93735"	"1673.94155"	"-2.51"	"-0.00140"	"11/92"	"11"	"92"	"1372428.93365479"	"HCD"	"MS2"	"6.231582"	"62.1"	"100.000"	"60.9982"	"19361"	"19361"	"19331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.3"	""	"67.8"	""	"67.9"	""	"84.7"	""	"203.7"	"103.1"	""	"988"	"13"	"36.000"	"29.000"	"2.31061159795876"	"14"	"0.000523"	"0.003126"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQWVGDPSWK"	"[R].iQWVGDPSWk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06907"	"Myelin protein P0 OS=Rattus norvegicus OX=10116 GN=Mpz PE=1 SV=1"	"P06907"	"Myelin protein P0 OS=Rattus norvegicus OX=10116 GN=Mpz PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"837.47479"	"1673.94231"	"1673.94155"	"0.45"	"0.00038"	"12/92"	"12"	"92"	"792285.081665039"	"HCD"	"MS2"	"33.97816"	"79.5"	"100.000"	"61.0327"	"19375"	"19375"	"19347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.0"	""	"81.3"	""	"86.0"	""	"106.7"	""	"247.3"	"137.1"	""	"993"	"15"	"36.000"	"29.000"	"1.63651222096108"	"23"	"0.004346"	"0.1153"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLNTLTLNVK"	"[R].iSLNTLTLNVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.68976"	"1674.05472"	"1674.05658"	"-1.11"	"-0.00062"	"12/104"	"12"	"104"	"3668611.99639893"	"HCD"	"MS2"	"45.61311"	"111.6"	"100.000"	"64.4394"	"20766"	"20766"	"20739"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.6"	""	"142.2"	""	"148.7"	""	"179.9"	"1.7"	"221.7"	"236.9"	""	"367"	"19"	"32.000"	"25.000"	"0.24810531534615"	"14"	"0.0001889"	"0.001089"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLNTLTLNVK"	"[R].iSLNTLTLNVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.69073"	"1674.05765"	"1674.05658"	"0.64"	"0.00036"	"10/104"	"10"	"104"	"2788668.17626953"	"HCD"	"MS2"	"42.95565"	"91.2"	"100.000"	"64.4571"	"20720"	"20720"	"20697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.1"	""	"126.9"	""	"112.2"	""	"156.5"	"0.1"	"172.4"	"192.7"	""	"357"	"30"	"32.000"	"25.000"	"0.0165439123473214"	"14"	"0.0001859"	"0.000364"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPLLLENIIK"	"[K].yPLLLENIIk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ES67"	"Rho guanine nucleotide exchange factor 11 OS=Rattus norvegicus OX=10116 GN=Arhgef11 PE=1 SV=1"	"Q9ES67"	"Rho guanine nucleotide exchange factor 11 OS=Rattus norvegicus OX=10116 GN=Arhgef11 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"837.53265"	"1674.05803"	"1674.06060"	"-1.53"	"-0.00128"	"6/78"	"6"	"78"	"254281.038024902"	"HCD"	"MS2"	"54.62581"	"21.9"	"100.000"	"79.0712"	"26718"	"26718"	"26687"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.5"	""	"33.7"	""	"31.6"	""	"36.1"	""	"38.6"	"43.9"	""	"357"	"14"	"32.000"	"25.000"	"0.664719195664405"	"13"	"0.001058"	"0.01316"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTPVTVTLK"	"[R].kTPVTVTLk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"1"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"558.70862"	"1674.11130"	"1674.11325"	"-1.17"	"-0.00065"	"8/90"	"8"	"90"	"10854318.069458"	"HCD"	"MS2"	"26.71974"	"450.3"	"73.105"	"36.5513"	"9362"	"9362"	"9338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"602.4"	""	"581.1"	""	"584.4"	""	"742.2"	"4.0"	"942.7"	"815.7"	""	"131"	"26"	"28.000"	"21.000"	"0.018040198006865"	""	"0"	"6.879E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGIPALGFSPMNR"	"[R].aVGIPALGFSPmNR.[T]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"837.96246"	"1674.91765"	"1674.91988"	"-1.33"	"-0.00111"	"15/106"	"15"	"106"	"791119.499755859"	"HCD"	"MS2"	"52.89849"	"53.4"	"100.000"	"56.0903"	"17361"	"17361"	"17333"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.7"	""	"64.4"	""	"62.1"	""	"104.1"	"1.7"	"102.9"	"102.6"	""	"1067"	"11"	"37.000"	"30.000"	"4.55128910828384"	"13"	"0.002651"	"0.03916"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNEILTAIIQGMR"	"[K].sNEILTAIIQGMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"837.97247"	"1674.93767"	"1674.94101"	"-1.99"	"-0.00167"	"7/128"	"7"	"128"	"297240.844909668"	"HCD"	"MS2"	"20.91647"	"21.5"	"100.000"	"78.6935"	"26563"	"26563"	"26543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.2"	""	"25.6"	""	"29.7"	""	"29.8"	""	"43.0"	"43.8"	""	"1078"	"37"	"37.000"	"30.000"	"0.00965136555325023"	"22"	"0.0001889"	"0.0006024"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNEILTAIIQGMR"	"[K].sNEILTAIIQGMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"837.97327"	"1674.93926"	"1674.94101"	"-1.04"	"-0.00087"	"7/128"	"7"	"128"	"311345.295898438"	"HCD"	"MS2"	"40.71366"	"23.2"	"100.000"	"78.4470"	"26412"	"26412"	"26385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.8"	""	"33.0"	""	"39.1"	""	"29.2"	"1.0"	"48.3"	"41.7"	""	"1077"	"47"	"37.000"	"30.000"	"0.000973163266856884"	"29"	"0"	"6.823E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNEILTAIIQGMR"	"[K].sNEILTAIIQGMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"558.98480"	"1674.93985"	"1674.94101"	"-0.69"	"-0.00038"	"15/128"	"15"	"128"	"2087687.5647583"	"HCD"	"MS2"	"41.83483"	"19.9"	"100.000"	"78.5097"	"26437"	"26437"	"26417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.6"	""	"22.3"	""	"42.5"	""	"27.0"	""	"36.6"	"40.2"	""	"1049"	"43"	"37.000"	"30.000"	"0.00267144041869499"	"24"	"0"	"1.445E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNEILTAIIQGMR"	"[K].sNEILTAIIQGMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"558.98480"	"1674.93985"	"1674.94101"	"-0.69"	"-0.00038"	"15/128"	"15"	"128"	"2349518.50604248"	"HCD"	"MS2"	"36.35219"	"20.2"	"100.000"	"78.4975"	"26483"	"26483"	"26463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.1"	""	"26.7"	""	"36.6"	""	"31.9"	"1.1"	"29.0"	"39.3"	""	"1049"	"37"	"37.000"	"30.000"	"0.00939172770441512"	"22"	"0"	"1.749E-05"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SNEILTAIIQGMR"	"[K].sNEILTAIIQGMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"3"	"3"	"3"	"558.98511"	"1674.94077"	"1674.94101"	"-0.14"	"-0.00008"	"6/128"	"6"	"128"	"725266.239624023"	"HCD"	"MS2"	"55.21476"	"18.6"	"100.000"	"78.8337"	"26621"	"26621"	"26591"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.8"	""	"22.9"	""	"36.3"	""	"30.6"	""	"33.5"	"31.8"	""	"1070"	"3"	"37.000"	"30.000"	"25.139334810379"	"16"	"0.0004166"	"0.002174"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNEILTAIIQGMR"	"[K].sNEILTAIIQGMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"837.97412"	"1674.94097"	"1674.94101"	"-0.02"	"-0.00002"	"7/128"	"7"	"128"	"409728.527893066"	"HCD"	"MS2"	"30.17133"	"22.1"	"100.000"	"78.7356"	"26530"	"26530"	"26513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"30.6"	""	"28.4"	""	"33.0"	""	"42.1"	"44.8"	""	"1064"	"18"	"37.000"	"30.000"	"0.835433011905451"	"22"	"0"	"0.0001431"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFGIGQDIQPK"	"[K].nFGIGQDIQPk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"3"	"3"	"0.7414"	"0.0000"	"1"	"1"	"1"	"558.98944"	"1674.95377"	"1674.95793"	"-2.48"	"-0.00139"	"9/100"	"9"	"100"	"7616947.55279541"	"HCD"	"MS2"	"4.852419"	"226.4"	"100.000"	"44.0317"	"12411"	"12411"	"12390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.2"	""	"305.5"	""	"314.8"	""	"389.5"	"5.0"	"422.0"	"386.9"	""	"1014"	"58"	"37.000"	"30.000"	"8.89217414433772E-05"	""	"0"	"8.573E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFGIGQDIQPK"	"[K].nFGIGQDIQPk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"558.98993"	"1674.95523"	"1674.95793"	"-1.61"	"-0.00090"	"8/100"	"8"	"100"	"5699786.92834473"	"HCD"	"MS2"	"58.53872"	"190.8"	"100.000"	"44.2450"	"12548"	"12548"	"12524"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.7"	""	"265.8"	""	"285.6"	""	"307.6"	"1.3"	"358.4"	"313.6"	""	"1007"	"31"	"37.000"	"30.000"	"0.0418793058750195"	"23"	"0.0001889"	"0.0005195"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFGIGQDIQPK"	"[K].nFGIGQDIQPk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"837.98157"	"1674.95586"	"1674.95793"	"-1.23"	"-0.00103"	"9/100"	"9"	"100"	"1304163.17590332"	"HCD"	"MS2"	"0"	"107.0"	"100.000"	"44.3324"	"12584"	"12584"	"12556"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.8"	""	"155.9"	""	"168.6"	""	"176.9"	""	"169.4"	"177.0"	""	"969"	"63"	"36.000"	"29.000"	"2.22481437219463E-05"	"26"	"0"	"7.597E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFGIGQDIQPK"	"[K].nFGIGQDIQPk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"837.98254"	"1674.95781"	"1674.95793"	"-0.07"	"-0.00006"	"9/100"	"9"	"100"	"1261681.605896"	"HCD"	"MS2"	"0"	"113.3"	"100.000"	"44.0523"	"12420"	"12420"	"12390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.3"	""	"152.9"	""	"171.0"	""	"188.6"	""	"206.3"	"183.7"	""	"968"	"61"	"36.000"	"29.000"	"3.90701754640438E-05"	"25"	"0"	"2.32E-05"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISPYVPWINK"	"[R].iSPYVPWINk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"559.00305"	"1674.99460"	"1674.99833"	"-2.23"	"-0.00124"	"11/74"	"11"	"74"	"3207950.11395264"	"HCD"	"MS2"	"9.645738"	"84.9"	"100.000"	"65.9984"	"21350"	"21350"	"21321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.2"	""	"73.8"	""	"86.2"	""	"125.0"	"0.6"	"186.0"	"211.7"	""	"732"	"28"	"35.000"	"28.000"	"0.0560378010975623"	"15"	"0.0001889"	"0.0004851"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISPYVPWINK"	"[R].iSPYVPWINk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.00385"	"1674.99698"	"1674.99833"	"-0.81"	"-0.00045"	"11/74"	"11"	"74"	"3107345.74786377"	"HCD"	"MS2"	"5.581156"	"89.0"	"100.000"	"66.0853"	"21438"	"21438"	"21411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.8"	"2.8"	"94.6"	""	"96.9"	""	"133.3"	"0.2"	"196.0"	"210.1"	""	"697"	"20"	"35.000"	"28.000"	"0.3821226513559"	"14"	"0.0005959"	"0.003671"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFPVELEK"	"[RK].lELFPVELEk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"O35867"	"Neurabin-1 OS=Rattus norvegicus OX=10116 GN=Ppp1r9a PE=1 SV=1"	"O35274; O35867"	"Neurabin-2 OS=Rattus norvegicus OX=10116 GN=Ppp1r9b PE=1 SV=1; Neurabin-1 OS=Rattus norvegicus OX=10116 GN=Ppp1r9a PE=1 SV=1"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"559.00690"	"1675.00614"	"1675.00823"	"-1.25"	"-0.00070"	"11/86"	"11"	"86"	"1201490.6574707"	"HCD"	"MS2"	"36.39596"	"38.9"	"100.000"	"75.5171"	"25227"	"25227"	"25201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.0"	""	"46.1"	""	"54.3"	""	"67.3"	""	"75.6"	"74.8"	""	"633"	"37"	"35.000"	"28.000"	"0.00631500522687651"	"24"	"0.0001889"	"0.0003804"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFPVELEK"	"[RK].lELFPVELEk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"O35867"	"Neurabin-1 OS=Rattus norvegicus OX=10116 GN=Ppp1r9a PE=1 SV=1"	"O35274; O35867"	"Neurabin-2 OS=Rattus norvegicus OX=10116 GN=Ppp1r9b PE=1 SV=1; Neurabin-1 OS=Rattus norvegicus OX=10116 GN=Ppp1r9a PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"559.00690"	"1675.00614"	"1675.00823"	"-1.25"	"-0.00070"	"12/86"	"12"	"86"	"1344385.76739502"	"HCD"	"MS2"	"27.28843"	"41.7"	"100.000"	"75.4750"	"25262"	"25262"	"25231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.3"	""	"51.4"	""	"54.2"	""	"75.6"	""	"79.4"	"87.3"	""	"633"	"42"	"35.000"	"28.000"	"0.00179214734980607"	"27"	"0"	"0.0001696"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFPVELEK"	"[RK].lELFPVELEk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"O35867"	"Neurabin-1 OS=Rattus norvegicus OX=10116 GN=Ppp1r9a PE=1 SV=1"	"O35274; O35867"	"Neurabin-2 OS=Rattus norvegicus OX=10116 GN=Ppp1r9b PE=1 SV=1; Neurabin-1 OS=Rattus norvegicus OX=10116 GN=Ppp1r9a PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"838.00690"	"1675.00652"	"1675.00823"	"-1.02"	"-0.00086"	"5/86"	"5"	"86"	"388727.165283203"	"HCD"	"MS2"	"31.61039"	"35.9"	"100.000"	"75.5373"	"25287"	"25287"	"25263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.4"	""	"41.4"	""	"45.8"	""	"61.6"	""	"72.6"	"69.6"	""	"633"	"28"	"35.000"	"28.000"	"0.0561530970701737"	"22"	"0.0003839"	"0.001541"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFPVELEK"	"[RK].lELFPVELEk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"O35867"	"Neurabin-1 OS=Rattus norvegicus OX=10116 GN=Ppp1r9a PE=1 SV=1"	"O35274; O35867"	"Neurabin-2 OS=Rattus norvegicus OX=10116 GN=Ppp1r9b PE=1 SV=1; Neurabin-1 OS=Rattus norvegicus OX=10116 GN=Ppp1r9a PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"5"	"838.00842"	"1675.00957"	"1675.00823"	"0.80"	"0.00067"	"9/86"	"9"	"86"	"378590.986633301"	"HCD"	"MS2"	"31.10621"	"32.6"	"100.000"	"75.5056"	"25222"	"25222"	"25201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.7"	""	"39.7"	""	"39.8"	""	"59.8"	""	"64.2"	"70.3"	""	"632"	"11"	"34.000"	"28.000"	"2.81635296450263"	"17"	"0.000523"	"0.003242"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPAPLGSLPAVPTR"	"[R].lGPAPLGSLPAVPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P51607"	"N-acylglucosamine 2-epimerase OS=Rattus norvegicus OX=10116 GN=Renbp PE=2 SV=2"	"P51607"	"N-acylglucosamine 2-epimerase OS=Rattus norvegicus OX=10116 GN=Renbp PE=2 SV=2"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"838.00928"	"1675.01128"	"1675.01041"	"0.52"	"0.00044"	"11/124"	"11"	"124"	"1817107.21160889"	"HCD"	"MS2"	"53.48503"	"107.0"	"100.000"	"57.6157"	"17984"	"17984"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.6"	""	"147.2"	""	"165.5"	""	"163.3"	""	"187.0"	"202.1"	""	"602"	"52"	"34.000"	"27.000"	"0.0002082411222466"	"17"	"0"	"6.13E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPAPLGSLPAVPTR"	"[R].lGPAPLGSLPAVPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P51607"	"N-acylglucosamine 2-epimerase OS=Rattus norvegicus OX=10116 GN=Renbp PE=2 SV=2"	"P51607"	"N-acylglucosamine 2-epimerase OS=Rattus norvegicus OX=10116 GN=Renbp PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"838.00952"	"1675.01177"	"1675.01041"	"0.81"	"0.00068"	"12/124"	"12"	"124"	"1612647.80419922"	"HCD"	"MS2"	"53.12185"	"94.0"	"100.000"	"57.4558"	"17865"	"17865"	"17835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.6"	""	"121.4"	""	"137.1"	""	"150.0"	"1.7"	"176.9"	"167.0"	""	"601"	"39"	"34.000"	"27.000"	"0.00392504351883618"	"15"	"0"	"0.0001799"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"559.01062"	"1675.01731"	"1675.02284"	"-3.30"	"-0.00184"	"12/88"	"12"	"88"	"4320489.27746582"	"HCD"	"MS2"	"11.40804"	"75.7"	"100.000"	"72.0500"	"23812"	"23812"	"23793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.5"	""	"91.6"	""	"101.8"	""	"153.1"	""	"123.1"	"140.0"	""	"584"	"48"	"34.000"	"27.000"	"0.000465996710993126"	"24"	"0"	"3.001E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"559.01141"	"1675.01969"	"1675.02284"	"-1.88"	"-0.00105"	"6/88"	"6"	"88"	"3470523.10443115"	"HCD"	"MS2"	"41.52361"	"71.7"	"100.000"	"71.9288"	"23814"	"23814"	"23793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.7"	""	"91.1"	""	"108.7"	""	"147.6"	""	"107.2"	"133.9"	""	"574"	"43"	"34.000"	"27.000"	"0.00140243227131393"	"19"	"0"	"3.372E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.01147"	"1675.01987"	"1675.02284"	"-1.77"	"-0.00099"	"3/88"	"3"	"88"	"931564.704040527"	"HCD"	"MS2"	"67.48103"	"16.4"	"100.000"	"78.3585"	"26427"	"26427"	"26399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.3"	""	"19.0"	""	"34.3"	""	"26.9"	""	"27.1"	"26.2"	""	"573"	"6"	"34.000"	"27.000"	"6.92029529068476"	"13"	"0.0008731"	"0.009058"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"559.01160"	"1675.02024"	"1675.02284"	"-1.55"	"-0.00087"	"10/88"	"10"	"88"	"516671.526306152"	"HCD"	"MS2"	"17.99207"	"14.3"	"100.000"	"79.7360"	"26989"	"26989"	"26959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.4"	""	"19.1"	""	"24.1"	""	"24.1"	""	"18.9"	"29.6"	""	"566"	"37"	"34.000"	"27.000"	"0.00549270703358756"	"23"	"0.0001859"	"0.0003284"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.01172"	"1675.02060"	"1675.02284"	"-1.33"	"-0.00074"	"7/88"	"7"	"88"	"818339.799133301"	"HCD"	"MS2"	"0"	"36.5"	"100.000"	"77.5742"	"26056"	"26056"	"26025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.5"	""	"47.9"	""	"46.3"	""	"65.0"	"2.7"	"73.0"	"70.1"	""	"566"	"4"	"34.000"	"27.000"	"11.635537107258"	"13"	"0.00286"	"0.04904"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"559.01190"	"1675.02115"	"1675.02284"	"-1.00"	"-0.00056"	"9/88"	"9"	"88"	"471901.792053223"	"HCD"	"MS2"	"60.51492"	"13.8"	"100.000"	"79.7044"	"26925"	"26925"	"26897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.6"	""	"18.8"	""	"21.9"	""	"21.9"	""	"18.2"	"27.1"	""	"567"	"22"	"34.000"	"27.000"	"0.172009749438341"	"20"	"0.0001859"	"0.0003479"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9605"	"0.0000"	"1"	"1"	"1"	"838.01428"	"1675.02129"	"1675.02284"	"-0.92"	"-0.00077"	"11/88"	"11"	"88"	"1311810.8739624"	"HCD"	"MS2"	"0"	"74.0"	"100.000"	"72.4025"	"23956"	"23956"	"23937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.7"	"1.1"	"78.7"	""	"87.1"	""	"177.3"	"0.5"	"137.3"	"125.7"	""	"566"	"76"	"34.000"	"27.000"	"6.94682623138864E-07"	"20"	"0"	"0.0001107"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"559.01196"	"1675.02134"	"1675.02284"	"-0.90"	"-0.00050"	"7/88"	"7"	"88"	"430631.183105469"	"HCD"	"MS2"	"35.57273"	"15.1"	"100.000"	"77.3609"	"26020"	"26020"	"25989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.7"	""	"21.0"	""	"21.9"	""	"26.1"	""	"24.3"	"27.7"	""	"566"	"13"	"34.000"	"27.000"	"1.40212403997756"	"14"	"0.0002277"	"0.001172"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"838.01434"	"1675.02141"	"1675.02284"	"-0.85"	"-0.00071"	"10/88"	"10"	"88"	"1344623.54003906"	"HCD"	"MS2"	"49.00114"	"83.0"	"100.000"	"72.0093"	"23847"	"23847"	"23823"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.3"	""	"102.5"	""	"109.3"	""	"179.0"	""	"138.2"	"144.7"	""	"562"	"49"	"34.000"	"27.000"	"0.000345705524598279"	"16"	"0.0001889"	"0.0004079"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"559.01202"	"1675.02152"	"1675.02284"	"-0.79"	"-0.00044"	"8/88"	"8"	"88"	"4259133.00024414"	"HCD"	"MS2"	"0"	"77.4"	"100.000"	"72.2328"	"23938"	"23938"	"23919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.6"	""	"84.3"	""	"98.6"	""	"175.6"	""	"128.6"	"134.8"	""	"562"	"48"	"34.000"	"27.000"	"0.000467418954754017"	"25"	"0"	"2.022E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9342"	"0.0000"	"1"	"1"	"1"	"838.01453"	"1675.02178"	"1675.02284"	"-0.63"	"-0.00053"	"11/88"	"11"	"88"	"1306618.92907715"	"HCD"	"MS2"	"4.458725"	"79.8"	"100.000"	"72.3138"	"23971"	"23971"	"23951"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.2"	""	"93.0"	""	"107.9"	""	"166.0"	"0.7"	"123.5"	"148.3"	""	"558"	"76"	"34.000"	"27.000"	"6.43582465652898E-07"	"22"	"0"	"0.0001391"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"559.01215"	"1675.02188"	"1675.02284"	"-0.57"	"-0.00032"	"6/88"	"6"	"88"	"332724.001220703"	"HCD"	"MS2"	"15.87101"	"11.4"	"100.000"	"80.6293"	"27353"	"27353"	"27327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.1"	""	"15.9"	""	"15.5"	""	"19.0"	""	"22.9"	"16.5"	""	"558"	"18"	"34.000"	"27.000"	"0.395006464608026"	"23"	"0.0001889"	"0.000832"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9315"	"0.0000"	"1"	"1"	"1"	"838.01495"	"1675.02263"	"1675.02284"	"-0.12"	"-0.00010"	"11/88"	"11"	"88"	"1288212.5914917"	"HCD"	"MS2"	"17.93865"	"85.4"	"100.000"	"72.1007"	"23833"	"23833"	"23809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.3"	""	"90.0"	""	"126.8"	""	"172.5"	""	"134.1"	"164.8"	""	"558"	"73"	"34.000"	"27.000"	"1.44412306114208E-06"	"22"	"0"	"0.0001187"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.3529"	"0.0000"	"1"	"1"	"1"	"559.01245"	"1675.02280"	"1675.02284"	"-0.02"	"-0.00001"	"10/88"	"10"	"88"	"332037.621276855"	"HCD"	"MS2"	"18.56602"	"10.8"	"100.000"	"80.5977"	"27289"	"27289"	"27265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"13.5"	""	"17.2"	""	"23.4"	""	"19.6"	"19.4"	""	"558"	"17"	"34.000"	"27.000"	"0.604789445244694"	"25"	"0.0006037"	"0.004684"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"559.01245"	"1675.02280"	"1675.02284"	"-0.02"	"-0.00001"	"12/88"	"12"	"88"	"5487489.89630127"	"HCD"	"MS2"	"5.00977"	"84.3"	"100.000"	"72.3660"	"23941"	"23941"	"23921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.4"	""	"88.1"	""	"108.8"	""	"190.5"	"0.3"	"132.6"	"155.9"	""	"558"	"50"	"34.000"	"27.000"	"0.000267672776192945"	"25"	"0"	"1.812E-05"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLAIIGVLMK"	"[K].aDGLAIIGVLmk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.5862"	"0.0000"	"1"	"1"	"1"	"559.01361"	"1675.02628"	"1675.02284"	"2.06"	"0.00115"	"9/88"	"9"	"88"	"504628.855712891"	"HCD"	"MS2"	"32.50233"	"17.6"	"100.000"	"79.3167"	"26767"	"26767"	"26737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.0"	""	"26.6"	""	"29.8"	""	"25.7"	""	"29.6"	"30.5"	""	"534"	"29"	"34.000"	"27.000"	"0.0327726274719295"	"26"	"0"	"0.0001357"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLAVLNPYIK"	"[K].vSLAVLNPYIk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"838.03076"	"1675.05425"	"1675.05585"	"-0.96"	"-0.00080"	"16/88"	"16"	"88"	"2601887.44116211"	"HCD"	"MS2"	"13.56469"	"141.1"	"100.000"	"68.5002"	"22414"	"22414"	"22394"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.5"	""	"209.1"	""	"231.2"	""	"230.6"	"0.7"	"224.9"	"245.5"	""	"405"	"54"	"33.000"	"26.000"	"7.69883527549136E-05"	"23"	"0"	"1.61E-05"	"1.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLAVLNPYIK"	"[K].vSLAVLNPYIk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"559.02295"	"1675.05429"	"1675.05585"	"-0.93"	"-0.00052"	"11/88"	"11"	"88"	"4574933.26184082"	"HCD"	"MS2"	"0"	"102.0"	"100.000"	"68.4723"	"22403"	"22403"	"22378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.0"	""	"157.1"	""	"159.7"	""	"160.4"	""	"180.1"	"178.8"	""	"405"	"32"	"33.000"	"26.000"	"0.0135339643307644"	"23"	"0.0001859"	"0.0003421"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLAVLNPYIK"	"[K].vSLAVLNPYIk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"838.03101"	"1675.05474"	"1675.05585"	"-0.67"	"-0.00056"	"16/88"	"16"	"88"	"2270038.19940186"	"HCD"	"MS2"	"12.60675"	"131.5"	"100.000"	"68.6349"	"22418"	"22418"	"22394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.9"	""	"197.5"	""	"213.9"	""	"217.0"	"1.3"	"199.5"	"237.4"	""	"405"	"49"	"33.000"	"26.000"	"0.000259671942987844"	"21"	"0"	"3.032E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLAVLNPYIK"	"[K].vSLAVLNPYIk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"559.02325"	"1675.05521"	"1675.05585"	"-0.38"	"-0.00021"	"11/88"	"11"	"88"	"3319807.14941406"	"HCD"	"MS2"	"16.69923"	"82.4"	"100.000"	"68.5679"	"22391"	"22391"	"22362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.2"	""	"127.7"	""	"128.2"	""	"128.7"	""	"140.9"	"147.3"	""	"397"	"41"	"32.000"	"25.000"	"0.00156949707657965"	"23"	"0"	"0.000137"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLAVLNPYIK"	"[K].vSLAVLNPYIk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"559.02344"	"1675.05576"	"1675.05585"	"-0.05"	"-0.00003"	"10/88"	"10"	"88"	"1372450.86749268"	"HCD"	"MS2"	"16.51862"	"51.2"	"100.000"	"68.7834"	"22530"	"22530"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.4"	""	"65.4"	""	"66.3"	""	"84.3"	"0.8"	"102.9"	"94.7"	""	"397"	"32"	"32.000"	"25.000"	"0.012381136484326"	"25"	"0.0001859"	"0.0003143"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLAVLNPYIK"	"[K].vSLAVLNPYIk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"3"	"3"	"0.7609"	"0.0000"	"1"	"1"	"1"	"559.02356"	"1675.05613"	"1675.05585"	"0.16"	"0.00009"	"11/88"	"11"	"88"	"2424907.42974854"	"HCD"	"MS2"	"7.702262"	"71.3"	"100.000"	"68.8584"	"22509"	"22509"	"22490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.5"	""	"99.7"	""	"106.7"	""	"118.2"	"0.4"	"124.7"	"136.5"	""	"397"	"46"	"32.000"	"25.000"	"0.000526939204052145"	""	"0.0001859"	"0.000334"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLAVLNPYIK"	"[K].vSLAVLNPYIk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"Q06647"	"ATP synthase subunit O, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5po PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"838.03339"	"1675.05950"	"1675.05585"	"2.18"	"0.00182"	"7/88"	"7"	"88"	"311820.857788086"	"HCD"	"MS2"	"12.58952"	"26.5"	"100.000"	"68.8341"	"22551"	"22551"	"22522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.6"	""	"40.5"	""	"40.5"	""	"45.0"	"1.4"	"41.8"	"45.1"	""	"382"	"29"	"32.000"	"25.000"	"0.0250630180712668"	"14"	"0.0001889"	"0.0009384"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAHVRPPVSK"	"[K].lLAHVRPPVSk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"419.52475"	"1675.07717"	"1675.07832"	"-0.68"	"-0.00029"	"10/90"	"10"	"90"	"8247663.96936035"	"HCD"	"MS2"	"16.19048"	"269.7"	"100.000"	"35.0039"	"8770"	"8770"	"8746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"417.0"	""	"361.9"	""	"371.9"	""	"350.2"	"10.0"	"407.6"	"635.5"	""	"274"	"16"	"31.000"	"24.000"	"0.33862620786721"	"14"	"0"	"8.666E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAHVRPPVSK"	"[K].lLAHVRPPVSk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"419.52487"	"1675.07766"	"1675.07832"	"-0.39"	"-0.00016"	"9/90"	"9"	"90"	"7644317.66107178"	"HCD"	"MS2"	"37.30917"	"269.4"	"100.000"	"34.9348"	"8699"	"8699"	"8670"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"398.1"	""	"360.7"	""	"383.6"	""	"358.7"	"4.1"	"411.5"	"635.1"	""	"274"	"15"	"31.000"	"24.000"	"0.482748093328207"	"13"	"0"	"9.975E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAFMPFSTGK"	"[K].sEAFmPFSTGk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"838.44067"	"1675.87407"	"1675.87656"	"-1.49"	"-0.00125"	"8/96"	"8"	"96"	"653347.45501709"	"HCD"	"MS2"	"0"	"55.7"	"100.000"	"44.4904"	"12598"	"12598"	"12578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.8"	""	"67.8"	""	"69.0"	""	"131.5"	""	"85.1"	"105.2"	""	"984"	"36"	"36.000"	"29.000"	"0.0111420499933578"	"15"	"0.0001889"	"0.0008776"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAFMPFSTGK"	"[K].sEAFmPFSTGk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"838.44104"	"1675.87480"	"1675.87656"	"-1.05"	"-0.00088"	"14/96"	"14"	"96"	"700299.745422363"	"HCD"	"MS2"	"0"	"54.1"	"100.000"	"44.7336"	"12747"	"12747"	"12721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.8"	""	"74.3"	""	"83.7"	""	"109.8"	"1.6"	"77.1"	"94.6"	""	"990"	"39"	"36.000"	"29.000"	"0.00574917063850969"	"15"	"0.0001889"	"0.0005458"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQWSPALTISK"	"[R].sQWSPALTISk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078; P62839; P70711"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus OX=10116 GN=Ube2d2 PE=1 SV=1; Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus OX=10116 GN=Ube2d2b PE=1 SV=1"	"0"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"559.33081"	"1675.97788"	"1675.97833"	"-0.27"	"-0.00015"	"13/116"	"13"	"116"	"11866547.6054688"	"HCD"	"MS2"	"6.949071"	"272.5"	"100.000"	"50.5890"	"15078"	"15078"	"15058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.0"	""	"321.1"	""	"349.4"	""	"511.4"	""	"501.2"	"531.2"	""	"782"	"38"	"35.000"	"28.000"	"0.00595904626734741"	""	"0"	"8.897E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQWSPALTISK"	"[R].sQWSPALTISk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078; P62839; P70711"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus OX=10116 GN=Ube2d2 PE=1 SV=1; Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus OX=10116 GN=Ube2d2b PE=1 SV=1"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"559.33087"	"1675.97806"	"1675.97833"	"-0.16"	"-0.00009"	"13/116"	"13"	"116"	"7602595.54528809"	"HCD"	"MS2"	"50.56502"	"185.5"	"100.000"	"50.7249"	"15184"	"15184"	"15162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"271.4"	"3.2"	"217.4"	""	"237.0"	""	"358.9"	"2.9"	"333.8"	"332.5"	""	"782"	"39"	"35.000"	"28.000"	"0.00470085393935408"	""	"0"	"7.84E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQWSPALTISK"	"[R].sQWSPALTISk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078; P62839; P70711"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus OX=10116 GN=Ube2d2 PE=1 SV=1; Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus OX=10116 GN=Ube2d2b PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"838.49286"	"1675.97844"	"1675.97833"	"0.07"	"0.00006"	"10/116"	"10"	"116"	"2676788.75952148"	"HCD"	"MS2"	"0"	"200.8"	"100.000"	"50.7363"	"15189"	"15189"	"15162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"271.6"	""	"229.1"	""	"256.7"	""	"407.7"	"1.9"	"360.5"	"375.6"	""	"784"	"54"	"35.000"	"28.000"	"0.000160430178614164"	"25"	"0"	"1.563E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQWSPALTISK"	"[R].sQWSPALTISk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078; P62839; P70711"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus OX=10116 GN=Ube2d2 PE=1 SV=1; Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus OX=10116 GN=Ube2d2b PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"838.49341"	"1675.97954"	"1675.97833"	"0.72"	"0.00061"	"12/116"	"12"	"116"	"2665013.22180176"	"HCD"	"MS2"	"0"	"192.0"	"100.000"	"50.5199"	"15050"	"15050"	"15026"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.0"	""	"226.0"	""	"227.8"	""	"400.3"	""	"350.2"	"369.5"	""	"774"	"31"	"35.000"	"28.000"	"0.0337062909313003"	"19"	"0"	"6.123E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQWSPALTISK"	"[R].sQWSPALTISk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078; P62839; P70711"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus OX=10116 GN=Ube2d2 PE=1 SV=1; Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus OX=10116 GN=Ube2d2b PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"838.49365"	"1675.98003"	"1675.97833"	"1.01"	"0.00085"	"13/116"	"13"	"116"	"377209.926330566"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"50.8784"	"15197"	"15197"	"15170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.0"	""	"47.9"	""	"46.1"	""	"67.0"	"0.7"	"78.0"	"67.3"	""	"773"	"41"	"35.000"	"28.000"	"0.00307007862720935"	"19"	"0.0001889"	"0.0005558"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLLDDYPK"	"[K].iIQLLDDYPk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"838.50403"	"1676.00078"	"1676.00348"	"-1.61"	"-0.00135"	"8/88"	"8"	"88"	"1684234.70489502"	"HCD"	"MS2"	"22.28963"	"114.3"	"100.000"	"71.0861"	"23418"	"23418"	"23395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.9"	""	"154.3"	""	"168.1"	""	"181.0"	"1.7"	"209.6"	"208.0"	""	"654"	"44"	"35.000"	"28.000"	"0.00120933814788147"	"23"	"0"	"5.708E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLLDDYPK"	"[K].iIQLLDDYPk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"559.33868"	"1676.00150"	"1676.00348"	"-1.18"	"-0.00066"	"7/88"	"7"	"88"	"1024611.89208984"	"HCD"	"MS2"	"0"	"41.7"	"100.000"	"71.6670"	"23655"	"23655"	"23635"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.0"	""	"59.4"	""	"57.1"	""	"64.8"	"0.6"	"81.3"	"76.8"	""	"649"	"27"	"35.000"	"28.000"	"0.0668674406856115"	"23"	"0"	"0.0001622"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLLDDYPK"	"[K].iIQLLDDYPk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"838.50439"	"1676.00151"	"1676.00348"	"-1.17"	"-0.00098"	"16/88"	"16"	"88"	"2705102.19378662"	"HCD"	"MS2"	"8.257236"	"178.4"	"100.000"	"71.0500"	"23455"	"23455"	"23434"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.6"	""	"236.2"	""	"263.9"	""	"279.0"	"1.4"	"328.4"	"329.7"	""	"649"	"47"	"35.000"	"28.000"	"0.000645973498501342"	"24"	"0"	"5.942E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLLDDYPK"	"[K].iIQLLDDYPk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"838.50439"	"1676.00151"	"1676.00348"	"-1.17"	"-0.00098"	"16/88"	"16"	"88"	"3361155.38494873"	"HCD"	"MS2"	"0"	"210.8"	"100.000"	"71.3562"	"23580"	"23580"	"23562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"300.7"	""	"275.5"	""	"312.7"	""	"314.2"	"5.6"	"390.7"	"397.7"	""	"649"	"48"	"35.000"	"28.000"	"0.000556179146286484"	"24"	"0"	"8.598E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLLDDYPK"	"[K].iIQLLDDYPk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"0.7925"	"0.0000"	"1"	"1"	"1"	"559.33893"	"1676.00223"	"1676.00348"	"-0.74"	"-0.00042"	"8/88"	"8"	"88"	"5025602.19177246"	"HCD"	"MS2"	"11.16782"	"112.7"	"100.000"	"71.0268"	"23446"	"23446"	"23418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.5"	""	"144.0"	""	"161.8"	""	"175.5"	""	"206.9"	"220.5"	""	"645"	"53"	"35.000"	"28.000"	"0.000171210233264494"	"27"	"0"	"7.583E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLLDDYPK"	"[K].iIQLLDDYPk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"838.50482"	"1676.00237"	"1676.00348"	"-0.66"	"-0.00056"	"9/88"	"9"	"88"	"4403504.71606445"	"HCD"	"MS2"	"1.528825"	"293.2"	"100.000"	"71.3900"	"23542"	"23542"	"23523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"422.2"	""	"387.9"	""	"439.5"	""	"439.1"	"6.7"	"525.2"	"556.8"	""	"659"	"56"	"35.000"	"28.000"	"7.72423394647915E-05"	"28"	"0"	"3.184E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLLDDYPK"	"[K].iIQLLDDYPk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"559.33911"	"1676.00278"	"1676.00348"	"-0.42"	"-0.00023"	"9/88"	"9"	"88"	"2690693.47174072"	"HCD"	"MS2"	"18.98927"	"75.5"	"100.000"	"71.0583"	"23407"	"23407"	"23379"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.0"	""	"104.3"	""	"124.2"	""	"115.0"	"0.1"	"138.5"	"122.5"	""	"638"	"15"	"35.000"	"28.000"	"1.04181518462975"	"14"	"0.0001889"	"0.0004571"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLLDDYPK"	"[K].iIQLLDDYPk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"0.7250"	"0.0000"	"1"	"1"	"1"	"559.33942"	"1676.00370"	"1676.00348"	"0.13"	"0.00007"	"8/88"	"8"	"88"	"13617278.3701782"	"HCD"	"MS2"	"4.263475"	"214.6"	"68.931"	"71.3509"	"23526"	"23526"	"23507"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.9"	""	"288.0"	""	"315.0"	""	"325.0"	""	"399.8"	"394.8"	""	"646"	"40"	"35.000"	"28.000"	"0.00326740163725947"	"26"	"0"	"9.589E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQLLDDYPK"	"[K].iIQLLDDYPk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"0.7755"	"0.0000"	"1"	"1"	"1"	"559.33948"	"1676.00388"	"1676.00348"	"0.24"	"0.00013"	"8/88"	"8"	"88"	"10729191.7580566"	"HCD"	"MS2"	"3.551122"	"222.6"	"92.720"	"71.3171"	"23564"	"23564"	"23546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"311.9"	""	"312.5"	""	"342.7"	""	"344.2"	"2.4"	"389.8"	"403.7"	""	"644"	"49"	"35.000"	"28.000"	"0.000416731060946895"	"26"	"0"	"8.627E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEKVTK"	"[K].tPVSEkVTk.[C]"	"N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.35596"	"1676.05332"	"1676.05613"	"-1.68"	"-0.00094"	"8/84"	"8"	"84"	"14644696.9036255"	"HCD"	"MS2"	"51.77336"	"766.5"	"100.000"	"30.4062"	"6899"	"6899"	"6869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1507.5"	""	"1388.6"	""	"1246.3"	""	"898.0"	"1.9"	"1146.5"	"1040.2"	""	"397"	"9"	"32.000"	"25.000"	"2.38100611675152"	"13"	"0.0003146"	"0.001398"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEKVTK"	"[K].tPVSEkVTk.[C]"	"N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.35651"	"1676.05497"	"1676.05613"	"-0.70"	"-0.00039"	"9/84"	"9"	"84"	"22059673.1377563"	"HCD"	"MS2"	"6.436996"	"859.5"	"73.840"	"30.3807"	"6847"	"6847"	"6826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1606.2"	""	"1546.6"	""	"1423.1"	""	"997.4"	""	"1324.3"	"1219.1"	""	"398"	"6"	"32.000"	"25.000"	"4.50664217211019"	"13"	"0.0007793"	"0.007283"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSDFLGLYEK"	"[R].fSDFLGLYEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.64783"	"1676.92893"	"1676.92998"	"-0.63"	"-0.00035"	"7/86"	"7"	"86"	"1556896.17816162"	"HCD"	"MS2"	"20.00232"	"45.0"	"100.000"	"74.9973"	"25067"	"25067"	"25039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.9"	""	"71.0"	""	"64.2"	""	"74.8"	"1.6"	"74.1"	"83.1"	""	"1127"	"23"	"37.000"	"30.000"	"0.254035213009113"	"14"	"0.0001859"	"0.0003592"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSDFLGLYEK"	"[R].fSDFLGLYEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"838.96844"	"1676.92961"	"1676.92998"	"-0.22"	"-0.00018"	"9/86"	"9"	"86"	"834487.93737793"	"HCD"	"MS2"	"21.38897"	"75.8"	"100.000"	"74.9513"	"25048"	"25048"	"25023"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.6"	""	"98.0"	""	"111.8"	""	"131.9"	"6.1"	"130.3"	"146.5"	""	"1119"	"42"	"37.000"	"30.000"	"0.0032870029274041"	"18"	"0"	"1.241E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSDFLGLYEK"	"[R].fSDFLGLYEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.64819"	"1676.93003"	"1676.92998"	"0.03"	"0.00002"	"7/86"	"7"	"86"	"1621191.88525391"	"HCD"	"MS2"	"16.4058"	"52.7"	"100.000"	"75.0047"	"25018"	"25018"	"24993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.5"	""	"76.1"	""	"65.7"	""	"85.0"	""	"107.8"	"89.5"	""	"1123"	"14"	"37.000"	"30.000"	"2.24568976990856"	"13"	"0.0001859"	"0.0003451"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSDFLGLYEK"	"[R].fSDFLGLYEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"838.96875"	"1676.93022"	"1676.92998"	"0.14"	"0.00012"	"9/86"	"9"	"86"	"884364.243835449"	"HCD"	"MS2"	"14.0851"	"89.2"	"100.000"	"74.9956"	"25014"	"25014"	"24993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.5"	""	"120.5"	""	"126.5"	""	"139.2"	"0.8"	"162.6"	"160.5"	""	"1108"	"45"	"37.000"	"30.000"	"0.00195663476064744"	"19"	"0"	"1.061E-05"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLINNMLDK"	"[K].iQLINnmLDk.[V]"	"N-Term(TMT6plex); N6(Deamidated); M7(Oxidation); K10(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.66528"	"1676.98130"	"1676.96571"	"9.29"	"0.00519"	"5/88"	"5"	"88"	"3088395.89331055"	"HCD"	"MS2"	"40.13343"	"129.9"	"100.000"	"50.3835"	"15045"	"15045"	"15031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.8"	""	"164.5"	""	"174.5"	""	"247.6"	"1.8"	"215.0"	"227.1"	""	"800"	"4"	"36.000"	"29.000"	"15.3482898196912"	"13"	"0.007411"	"0.2798"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"838.99438"	"1676.98149"	"1677.00996"	"-16.98"	"-0.01423"	"9/100"	"9"	"100"	"2120978.64251709"	"HCD"	"MS2"	"0"	"182.1"	"100.000"	"51.7392"	"15549"	"15549"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.4"	""	"123.9"	""	"132.1"	""	"390.8"	"0.3"	"377.3"	"514.6"	""	"830"	"36"	"36.000"	"29.000"	"0.0100936466376563"	"21"	"0.00103"	"0.01225"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.8333"	"0.0000"	"1"	"2"	"2"	"838.99438"	"1676.98149"	"1677.00996"	"-16.98"	"-0.01423"	"9/100"	"9"	"100"	"2120978.64251709"	"HCD"	"MS2"	"0"	"182.1"	"100.000"	"51.7392"	"15549"	"15549"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.4"	""	"123.9"	""	"132.1"	""	"390.8"	"0.3"	"377.3"	"514.6"	""	"830"	"36"	"36.000"	"29.000"	"0.0103764332510402"	"21"	"0.00103"	"0.01232"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"838.99603"	"1676.98479"	"1677.00996"	"-15.01"	"-0.01259"	"9/100"	"9"	"100"	"1724826.6307373"	"HCD"	"MS2"	"12.63054"	"146.7"	"100.000"	"51.8635"	"15650"	"15650"	"15622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.9"	""	"123.3"	""	"138.5"	""	"299.3"	""	"302.5"	"365.4"	""	"810"	"39"	"36.000"	"29.000"	"0.00556486999880069"	"15"	"0.00323"	"0.0677"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"2"	"2"	"838.99603"	"1676.98479"	"1677.00996"	"-15.01"	"-0.01259"	"9/100"	"9"	"100"	"1724826.6307373"	"HCD"	"MS2"	"12.63054"	"146.7"	"100.000"	"51.8635"	"15650"	"15650"	"15622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.9"	""	"123.3"	""	"138.5"	""	"299.3"	""	"302.5"	"365.4"	""	"810"	"39"	"36.000"	"29.000"	"0.00556486999880069"	"15"	"0.00323"	"0.0677"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.7174"	"0.0000"	"1"	"1"	"1"	"559.67432"	"1677.00840"	"1677.00996"	"-0.93"	"-0.00052"	"15/100"	"15"	"100"	"44809972.6459961"	"HCD"	"MS2"	"7.382298"	"341.7"	"27.173"	"38.0143"	"9962"	"9962"	"9943"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"463.8"	""	"328.7"	""	"365.7"	""	"672.5"	"1.1"	"721.9"	"691.1"	""	"636"	"46"	"35.000"	"28.000"	"0.000721817022899056"	"28"	"0.0001308"	"0.0002782"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.7174"	"0.0000"	"1"	"2"	"2"	"559.67432"	"1677.00840"	"1677.00996"	"-0.93"	"-0.00052"	"15/100"	"15"	"100"	"44809972.6459961"	"HCD"	"MS2"	"7.382298"	"341.7"	"27.173"	"38.0143"	"9962"	"9962"	"9943"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"463.8"	""	"328.7"	""	"365.7"	""	"672.5"	"1.1"	"721.9"	"691.1"	""	"636"	"46"	"35.000"	"28.000"	"0.000721817022899056"	"28"	"0.0001308"	"0.0002782"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"559.67438"	"1677.00858"	"1677.00996"	"-0.82"	"-0.00046"	"12/100"	"12"	"100"	"44083709.8012695"	"HCD"	"MS2"	"12.09258"	"351.7"	"29.856"	"38.0869"	"10035"	"10035"	"10017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"458.4"	""	"356.6"	""	"381.3"	""	"688.7"	"0.5"	"748.4"	"706.3"	""	"636"	"42"	"35.000"	"28.000"	"0.00185108823251137"	"24"	"0.0001889"	"0.0004839"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.8095"	"0.0000"	"1"	"2"	"2"	"559.67438"	"1677.00858"	"1677.00996"	"-0.82"	"-0.00046"	"12/100"	"12"	"100"	"44083709.8012695"	"HCD"	"MS2"	"12.09258"	"351.7"	"29.856"	"38.0869"	"10035"	"10035"	"10017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"458.4"	""	"356.6"	""	"381.3"	""	"688.7"	"0.5"	"748.4"	"706.3"	""	"636"	"42"	"35.000"	"28.000"	"0.00185108823251137"	"24"	"0.0001889"	"0.0004839"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"559.67499"	"1677.01041"	"1677.00996"	"0.27"	"0.00015"	"11/100"	"11"	"100"	"38852211.0928955"	"HCD"	"MS2"	"24.94929"	"423.5"	"34.985"	"36.8885"	"9500"	"9500"	"9482"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"472.3"	""	"448.3"	""	"505.0"	""	"772.2"	"0.7"	"937.0"	"890.8"	""	"631"	"40"	"34.000"	"28.000"	"0.00336511076248147"	"23"	"0.0003839"	"0.001882"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"2"	"2"	"559.67499"	"1677.01041"	"1677.00996"	"0.27"	"0.00015"	"11/100"	"11"	"100"	"38852211.0928955"	"HCD"	"MS2"	"24.94929"	"423.5"	"34.985"	"36.8885"	"9500"	"9500"	"9482"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"472.3"	""	"448.3"	""	"505.0"	""	"772.2"	"0.7"	"937.0"	"890.8"	""	"631"	"40"	"34.000"	"28.000"	"0.00336511076248147"	"23"	"0.0003839"	"0.001882"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"839.00891"	"1677.01055"	"1677.00996"	"0.35"	"0.00029"	"15/100"	"15"	"100"	"336850.365356445"	"HCD"	"MS2"	"0"	"33.1"	"100.000"	"37.0301"	"9602"	"9602"	"9574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.0"	""	"39.6"	""	"41.7"	""	"66.0"	""	"61.5"	"67.8"	""	"602"	"44"	"34.000"	"27.000"	"0.00112866873675891"	"21"	"0"	"0.0001057"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.8864"	"0.0000"	"1"	"2"	"2"	"839.00891"	"1677.01055"	"1677.00996"	"0.35"	"0.00029"	"15/100"	"15"	"100"	"336850.365356445"	"HCD"	"MS2"	"0"	"33.1"	"100.000"	"37.0301"	"9602"	"9602"	"9574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.0"	""	"39.6"	""	"41.7"	""	"66.0"	""	"61.5"	"67.8"	""	"602"	"44"	"34.000"	"27.000"	"0.00112866873675891"	"21"	"0"	"0.0001057"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSFIPWIQK"	"[R].iSSFIPWIQk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q06606; P97594"	"Granzyme-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mcpt10 PE=2 SV=1;Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"Q06606; P97594"	"Granzyme-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mcpt10 PE=2 SV=1; Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.67523"	"1677.01114"	"1677.01398"	"-1.69"	"-0.00095"	"10/76"	"10"	"76"	"951608.357116699"	"HCD"	"MS2"	"24.41092"	"24.2"	"100.000"	"79.8522"	"26985"	"26985"	"26961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.7"	""	"42.9"	""	"35.1"	""	"39.7"	""	"27.3"	"39.0"	""	"599"	"27"	"34.000"	"27.000"	"0.0542496357739571"	"14"	"0"	"0.0001742"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSFIPWIQK"	"[R].iSSFIPWIQk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q06606; P97594"	"Granzyme-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mcpt10 PE=2 SV=1;Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"Q06606; P97594"	"Granzyme-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mcpt10 PE=2 SV=1; Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"839.00928"	"1677.01128"	"1677.01398"	"-1.61"	"-0.00135"	"9/76"	"9"	"76"	"322104.002441406"	"HCD"	"MS2"	"17.07531"	"23.5"	"100.000"	"79.8401"	"27031"	"27031"	"27007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.8"	""	"41.2"	""	"35.3"	""	"39.2"	""	"27.9"	"30.7"	""	"599"	"22"	"34.000"	"27.000"	"0.192042268187256"	"20"	"0.0001889"	"0.000821"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.8654"	"0.0000"	"1"	"1"	"1"	"559.67529"	"1677.01133"	"1677.00996"	"0.81"	"0.00045"	"13/100"	"13"	"100"	"38494399.7978516"	"HCD"	"MS2"	"17.96632"	"344.6"	"29.422"	"37.0026"	"9591"	"9591"	"9574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"386.9"	""	"365.2"	""	"409.6"	""	"645.1"	""	"767.6"	"703.7"	""	"608"	"52"	"34.000"	"27.000"	"0.000173729505548248"	"23"	"0.0001308"	"0.0003025"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.8654"	"0.0000"	"1"	"2"	"2"	"559.67529"	"1677.01133"	"1677.00996"	"0.81"	"0.00045"	"13/100"	"13"	"100"	"38494399.7978516"	"HCD"	"MS2"	"17.96632"	"344.6"	"29.422"	"37.0026"	"9591"	"9591"	"9574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"386.9"	""	"365.2"	""	"409.6"	""	"645.1"	""	"767.6"	"703.7"	""	"608"	"52"	"34.000"	"27.000"	"0.000173729505548248"	"23"	"0.0001308"	"0.0003025"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSFIPWIQK"	"[R].iSSFIPWIQk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q06606; P97594"	"Granzyme-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mcpt10 PE=2 SV=1;Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"Q06606; P97594"	"Granzyme-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mcpt10 PE=2 SV=1; Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"559.67566"	"1677.01242"	"1677.01398"	"-0.93"	"-0.00052"	"10/76"	"10"	"76"	"934431.305603027"	"HCD"	"MS2"	"21.38481"	"25.2"	"100.000"	"79.8031"	"27016"	"27016"	"26991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.9"	""	"41.7"	""	"38.2"	""	"45.5"	""	"29.4"	"36.9"	""	"577"	"31"	"34.000"	"27.000"	"0.0226540480585006"	"22"	"0.0001889"	"0.0008395"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSFIPWIQK"	"[R].iSSFIPWIQk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q06606; P97594"	"Granzyme-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mcpt10 PE=2 SV=1;Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"Q06606; P97594"	"Granzyme-like protein 2 OS=Rattus norvegicus OX=10116 GN=Mcpt10 PE=2 SV=1; Mast cell protease 8 OS=Rattus norvegicus OX=10116 GN=Mcpt8 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.01025"	"1677.01323"	"1677.01398"	"-0.45"	"-0.00038"	"11/76"	"11"	"76"	"308840.081176758"	"HCD"	"MS2"	"11.78298"	"24.0"	"100.000"	"79.8545"	"26986"	"26986"	"26961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.4"	""	"47.1"	""	"33.7"	""	"36.6"	""	"31.8"	"40.4"	""	"597"	"26"	"34.000"	"27.000"	"0.0765498484900538"	"14"	"0.0001889"	"0.0007615"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KENPVQFK"	"[R].kENPVQFk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"1"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"559.68103"	"1677.02854"	"1677.03025"	"-1.02"	"-0.00057"	"6/70"	"6"	"70"	"34239691.022583"	"HCD"	"MS2"	"54.0835"	"685.3"	"39.498"	"33.7770"	"8271"	"8271"	"8252"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"972.3"	""	"809.7"	""	"901.9"	""	"1223.4"	"9.1"	"1286.5"	"1293.1"	""	"503"	"16"	"34.000"	"27.000"	"0.57881261707824"	"19"	"0.0001889"	"0.0007815"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFLGDVVLTAR"	"[R].kFLGDVVLTAR.[D]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.68622"	"1677.04410"	"1677.04635"	"-1.34"	"-0.00075"	"10/108"	"10"	"108"	"8144766.26330566"	"HCD"	"MS2"	"19.81527"	"301.0"	"100.000"	"47.0778"	"13652"	"13652"	"13624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"455.5"	""	"470.3"	""	"533.8"	""	"449.1"	"5.2"	"456.3"	"473.6"	""	"407"	"24"	"33.000"	"26.000"	"0.0727050225639175"	"14"	"0"	"2.613E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFLGDVVLTAR"	"[R].kFLGDVVLTAR.[D]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.68701"	"1677.04648"	"1677.04635"	"0.08"	"0.00004"	"7/108"	"7"	"108"	"8913650.4987793"	"HCD"	"MS2"	"13.01081"	"337.3"	"100.000"	"47.3669"	"13818"	"13818"	"13794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"512.9"	""	"545.1"	""	"593.2"	""	"473.6"	"5.2"	"533.3"	"523.9"	""	"398"	"24"	"32.000"	"25.000"	"0.0829570073105968"	"14"	"0"	"6.375E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYIFIYDGNK"	"[K].sYIFIYDGNk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"839.46576"	"1677.92424"	"1677.92523"	"-0.59"	"-0.00049"	"11/86"	"11"	"86"	"1639683.47515869"	"HCD"	"MS2"	"0"	"136.7"	"100.000"	"55.9581"	"17253"	"17253"	"17227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.0"	""	"131.7"	""	"121.3"	""	"264.0"	""	"329.1"	"351.7"	""	"1102"	"49"	"37.000"	"30.000"	"0.000667039571586315"	"18"	"0"	"2.833E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYFGIYDTAK"	"[R].aAYFGIYDTAk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.9861"	"0.0000"	"1"	"1"	"1"	"839.46594"	"1677.92461"	"1677.92523"	"-0.37"	"-0.00031"	"10/82"	"10"	"82"	"4229284.359375"	"HCD"	"MS2"	"28.53015"	"366.4"	"100.000"	"51.9580"	"15638"	"15638"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.5"	""	"528.8"	""	"477.1"	""	"643.9"	"1.7"	"688.2"	"759.7"	""	"1094"	"72"	"37.000"	"30.000"	"3.19144472037739E-06"	"18"	"0"	"1.644E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYIFIYDGNK"	"[K].sYIFIYDGNk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.97980"	"1677.92484"	"1677.92523"	"-0.23"	"-0.00013"	"10/86"	"10"	"86"	"3232203.15710449"	"HCD"	"MS2"	"38.29111"	"121.7"	"100.000"	"56.2421"	"17423"	"17423"	"17397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.9"	""	"135.2"	""	"149.2"	""	"198.0"	"0.2"	"277.1"	"269.0"	""	"1090"	"18"	"37.000"	"30.000"	"0.883886503060617"	"14"	"0.0001889"	"0.001033"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYIFIYDGNK"	"[K].sYIFIYDGNk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.97980"	"1677.92484"	"1677.92523"	"-0.23"	"-0.00013"	"8/86"	"8"	"86"	"3010906.36810303"	"HCD"	"MS2"	"21.71602"	"122.4"	"100.000"	"56.0296"	"17282"	"17282"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.3"	""	"141.2"	""	"142.6"	""	"197.3"	"1.2"	"275.9"	"279.2"	""	"1090"	"18"	"37.000"	"30.000"	"0.78776467505653"	"14"	"0.000523"	"0.002795"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYFGIYDTAK"	"[R].aAYFGIYDTAk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.9857"	"0.0000"	"1"	"1"	"1"	"839.46625"	"1677.92522"	"1677.92523"	"-0.01"	"-0.00001"	"10/82"	"10"	"82"	"4187251.65179443"	"HCD"	"MS2"	"24.72377"	"344.9"	"100.000"	"52.1582"	"15770"	"15770"	"15750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"359.3"	""	"463.8"	""	"480.2"	""	"611.6"	"3.5"	"649.4"	"704.9"	""	"1091"	"70"	"37.000"	"30.000"	"4.97501912868648E-06"	"18"	"0"	"1.525E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYFGIYDTAK"	"[R].aAYFGIYDTAk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"559.98010"	"1677.92575"	"1677.92523"	"0.31"	"0.00018"	"8/82"	"8"	"82"	"11722926.3861084"	"HCD"	"MS2"	"43.78539"	"252.5"	"85.141"	"51.9531"	"15636"	"15636"	"15618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"253.8"	""	"328.2"	""	"344.1"	""	"451.5"	"0.1"	"476.5"	"542.1"	""	"1090"	"43"	"37.000"	"30.000"	"0.00269399324407825"	"20"	"0.0001308"	"0.0002602"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYFGIYDTAK"	"[R].aAYFGIYDTAk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"559.98016"	"1677.92594"	"1677.92523"	"0.42"	"0.00024"	"11/82"	"11"	"82"	"11750627.7491455"	"HCD"	"MS2"	"18.81826"	"225.4"	"90.901"	"52.1556"	"15769"	"15769"	"15750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"217.9"	""	"313.1"	""	"336.1"	""	"400.9"	""	"430.4"	"444.7"	""	"1091"	"33"	"37.000"	"30.000"	"0.0247055629837425"	"19"	"0.0001889"	"0.0006583"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYIFIYDGNK"	"[K].sYIFIYDGNk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"P97829"	"Leukocyte surface antigen CD47 OS=Rattus norvegicus OX=10116 GN=Cd47 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"839.46661"	"1677.92595"	"1677.92523"	"0.43"	"0.00036"	"8/86"	"8"	"86"	"1680496.09509277"	"HCD"	"MS2"	"5.993411"	"141.0"	"100.000"	"56.1756"	"17396"	"17396"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.9"	""	"137.8"	""	"119.3"	""	"278.7"	"1.1"	"340.9"	"359.0"	""	"1091"	"44"	"37.000"	"30.000"	"0.00239218495636255"	"17"	"0"	"6.55E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFIMPLDLGAK"	"[R].dFIMPLDLGAk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"559.99231"	"1677.96238"	"1677.96499"	"-1.56"	"-0.00087"	"11/92"	"11"	"92"	"854505.161315918"	"HCD"	"MS2"	"11.96615"	"27.5"	"100.000"	"73.8581"	"24602"	"24602"	"24575"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.7"	""	"37.9"	""	"37.8"	""	"42.4"	"1.8"	"42.8"	"57.1"	""	"961"	"17"	"36.000"	"29.000"	"1.00390679087537"	"15"	"0.0004166"	"0.002226"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFIMPLDLGAK"	"[R].dFIMPLDLGAk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"559.99280"	"1677.96384"	"1677.96499"	"-0.68"	"-0.00038"	"11/92"	"11"	"92"	"969748.135864258"	"HCD"	"MS2"	"34.82717"	"31.9"	"100.000"	"73.8674"	"24554"	"24554"	"24529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.1"	""	"45.9"	""	"45.5"	""	"42.7"	""	"55.2"	"64.9"	""	"983"	"16"	"36.000"	"29.000"	"1.36937855438153"	"15"	"0.0003839"	"0.001698"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFIMPLDLGAK"	"[R].dFIMPLDLGAk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"839.48621"	"1677.96514"	"1677.96499"	"0.09"	"0.00007"	"13/92"	"13"	"92"	"530834.808349609"	"HCD"	"MS2"	"0"	"43.8"	"100.000"	"73.7544"	"24508"	"24508"	"24481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.7"	""	"73.1"	""	"64.3"	""	"59.0"	"1.0"	"70.3"	"77.2"	""	"968"	"21"	"36.000"	"29.000"	"0.363785480704812"	"20"	"0.0001889"	"0.0004119"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFIMPLDLGAK"	"[R].dFIMPLDLGAk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"839.48669"	"1677.96611"	"1677.96499"	"0.67"	"0.00056"	"7/92"	"7"	"92"	"558665.267333984"	"HCD"	"MS2"	"21.51246"	"46.0"	"100.000"	"73.7820"	"24571"	"24571"	"24543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.0"	""	"71.9"	""	"65.9"	""	"60.2"	""	"81.4"	"86.0"	""	"984"	"21"	"36.000"	"29.000"	"0.406410671191972"	"21"	"0.0003571"	"0.001513"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLEPVAAELK"	"[K].ySLEPVAAELk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9508"	"0.0000"	"1"	"1"	"1"	"839.49493"	"1677.98259"	"1677.98274"	"-0.09"	"-0.00008"	"10/94"	"10"	"94"	"888924.549926758"	"HCD"	"MS2"	"0"	"74.3"	"100.000"	"55.2668"	"17024"	"17024"	"16997"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.9"	""	"98.7"	""	"93.4"	""	"123.6"	""	"137.3"	"144.2"	""	"872"	"61"	"36.000"	"29.000"	"3.59324218145669E-05"	"19"	"0"	"2.268E-06"	"1.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLAGGVAAAISK"	"[K].dFLAGGVAAAISk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.6235"	"0.0000"	"1"	"1"	"1"	"839.49896"	"1677.99065"	"1677.99398"	"-1.98"	"-0.00166"	"11/118"	"11"	"118"	"2843405.95837402"	"HCD"	"MS2"	"0"	"192.3"	"100.000"	"62.6075"	"20018"	"20018"	"19987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.0"	""	"278.8"	""	"297.4"	""	"336.8"	"3.4"	"353.9"	"359.0"	""	"823"	"85"	"36.000"	"29.000"	"1.25132418806579E-07"	""	"0"	"7.269E-07"	"1.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLAGGVAAAISK"	"[K].dFLAGGVAAAISk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"839.49902"	"1677.99077"	"1677.99398"	"-1.91"	"-0.00160"	"9/118"	"9"	"118"	"2199329.32275391"	"HCD"	"MS2"	"0"	"163.5"	"100.000"	"62.4776"	"19912"	"19912"	"19881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.7"	""	"239.5"	""	"251.0"	""	"286.9"	""	"294.2"	"312.5"	""	"823"	"76"	"36.000"	"29.000"	"1.06015615610656E-06"	""	"0"	"1.674E-06"	"1.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLAGGVAAAISK"	"[K].dFLAGGVAAAISk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"3"	"3"	"0.6458"	"0.0000"	"1"	"1"	"1"	"560.00226"	"1677.99222"	"1677.99398"	"-1.05"	"-0.00059"	"15/118"	"15"	"118"	"2887996.87280273"	"HCD"	"MS2"	"14.81301"	"80.3"	"100.000"	"62.8658"	"20123"	"20123"	"20099"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.0"	""	"104.6"	""	"121.8"	""	"133.4"	""	"147.4"	"162.1"	""	"804"	"48"	"36.000"	"29.000"	"0.000622624280802817"	""	"0"	"1.434E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLAGGVAAAISK"	"[K].dFLAGGVAAAISk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"560.00232"	"1677.99240"	"1677.99398"	"-0.94"	"-0.00052"	"9/118"	"9"	"118"	"4858178.3772583"	"HCD"	"MS2"	"14.00192"	"126.6"	"100.000"	"62.5568"	"19997"	"19997"	"19971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.5"	""	"178.7"	""	"181.1"	""	"241.2"	""	"245.2"	"235.6"	""	"803"	"39"	"36.000"	"29.000"	"0.00547880129340454"	"27"	"0"	"9.299E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLAGGVAAAISK"	"[K].dFLAGGVAAAISk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"560.00238"	"1677.99259"	"1677.99398"	"-0.83"	"-0.00046"	"9/118"	"9"	"118"	"5866566.33624268"	"HCD"	"MS2"	"2.587617"	"138.6"	"100.000"	"62.4662"	"19907"	"19907"	"19881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"126.4"	""	"186.8"	""	"202.2"	""	"270.8"	"2.2"	"261.1"	"265.3"	""	"803"	"48"	"36.000"	"29.000"	"0.000639271803911046"	""	"0"	"8.685E-06"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"839.50012"	"1677.99297"	"1677.99398"	"-0.60"	"-0.00051"	"14/100"	"14"	"100"	"3020586.97906494"	"HCD"	"MS2"	"0"	"222.2"	"100.000"	"51.1476"	"15307"	"15307"	"15282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.2"	""	"205.9"	""	"264.4"	""	"453.6"	""	"431.9"	"451.1"	""	"793"	"37"	"35.000"	"28.000"	"0.00787486634732198"	"24"	"0"	"0.0001424"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.5405"	"0.0000"	"1"	"2"	"2"	"839.50012"	"1677.99297"	"1677.99398"	"-0.60"	"-0.00051"	"14/100"	"14"	"100"	"3020586.97906494"	"HCD"	"MS2"	"0"	"222.2"	"100.000"	"51.1476"	"15307"	"15307"	"15282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.2"	""	"205.9"	""	"264.4"	""	"453.6"	""	"431.9"	"451.1"	""	"793"	"37"	"35.000"	"28.000"	"0.00792945231309383"	"24"	"0"	"0.0001424"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLAGGVAAAISK"	"[K].dFLAGGVAAAISk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"560.00262"	"1677.99332"	"1677.99398"	"-0.39"	"-0.00022"	"11/118"	"11"	"118"	"2631420.92901611"	"HCD"	"MS2"	"15.5778"	"77.9"	"100.000"	"62.7751"	"20033"	"20033"	"20009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.0"	""	"103.7"	""	"113.9"	""	"114.8"	""	"144.9"	"159.7"	""	"784"	"44"	"35.000"	"28.000"	"0.00167604651371422"	""	"0"	"9.384E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"560.00262"	"1677.99332"	"1677.99398"	"-0.39"	"-0.00022"	"11/100"	"11"	"100"	"18596720.3729248"	"HCD"	"MS2"	"18.30718"	"348.7"	"72.269"	"51.4168"	"15467"	"15467"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"439.9"	""	"363.9"	""	"410.9"	""	"694.1"	""	"700.3"	"702.2"	""	"784"	"33"	"35.000"	"28.000"	"0.0209067279031147"	"24"	"0.0006037"	"0.005968"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.5455"	"0.0000"	"1"	"2"	"2"	"560.00262"	"1677.99332"	"1677.99398"	"-0.39"	"-0.00022"	"11/100"	"11"	"100"	"18596720.3729248"	"HCD"	"MS2"	"18.30718"	"348.7"	"72.269"	"51.4168"	"15467"	"15467"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"439.9"	""	"363.9"	""	"410.9"	""	"694.1"	""	"700.3"	"702.2"	""	"784"	"33"	"35.000"	"28.000"	"0.0209067279031147"	"24"	"0.0006037"	"0.005968"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLAGGVAAAISK"	"[K].dFLAGGVAAAISk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"839.50037"	"1677.99346"	"1677.99398"	"-0.31"	"-0.00026"	"18/118"	"18"	"118"	"663362.451416016"	"HCD"	"MS2"	"13.68132"	"59.0"	"100.000"	"62.8257"	"20054"	"20054"	"20025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.5"	""	"77.2"	""	"90.5"	""	"91.4"	""	"108.7"	"116.7"	""	"782"	"41"	"35.000"	"28.000"	"0.00338202456241296"	"28"	"0"	"1.62E-05"	"1.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"839.50055"	"1677.99382"	"1677.99398"	"-0.09"	"-0.00008"	"10/100"	"10"	"100"	"1907876.45495605"	"HCD"	"MS2"	"0"	"142.0"	"100.000"	"51.6561"	"15565"	"15565"	"15542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.7"	""	"136.2"	""	"171.8"	""	"276.6"	"3.3"	"278.4"	"289.7"	""	"782"	"50"	"35.000"	"28.000"	"0.000362390460941326"	"22"	"0"	"3.305E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.5000"	"0.0000"	"1"	"2"	"2"	"839.50055"	"1677.99382"	"1677.99398"	"-0.09"	"-0.00008"	"10/100"	"10"	"100"	"1907876.45495605"	"HCD"	"MS2"	"0"	"142.0"	"100.000"	"51.6561"	"15565"	"15565"	"15542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.7"	""	"136.2"	""	"171.8"	""	"276.6"	"3.3"	"278.4"	"289.7"	""	"782"	"50"	"35.000"	"28.000"	"0.000367431814430773"	"22"	"0"	"3.31E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"839.50079"	"1677.99431"	"1677.99398"	"0.20"	"0.00017"	"10/100"	"10"	"100"	"4131782.22821045"	"HCD"	"MS2"	"0"	"314.5"	"100.000"	"51.3568"	"15443"	"15443"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"411.9"	""	"299.4"	""	"368.9"	""	"678.2"	"2.8"	"599.8"	"623.0"	""	"788"	"38"	"35.000"	"28.000"	"0.00564282032313777"	"24"	"0"	"0.0001388"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.2105"	"0.0000"	"1"	"2"	"2"	"839.50079"	"1677.99431"	"1677.99398"	"0.20"	"0.00017"	"14/100"	"14"	"100"	"4131782.22821045"	"HCD"	"MS2"	"0"	"314.5"	"100.000"	"51.3568"	"15443"	"15443"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"411.9"	""	"299.4"	""	"368.9"	""	"678.2"	"2.8"	"599.8"	"623.0"	""	"788"	"38"	"35.000"	"28.000"	"0.00586808264618101"	"24"	"0"	"0.0001395"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.0270"	"0.0000"	"1"	"1"	"1"	"839.50092"	"1677.99455"	"1677.99398"	"0.34"	"0.00029"	"10/100"	"10"	"100"	"2455732.77252197"	"HCD"	"MS2"	"2.651992"	"189.3"	"100.000"	"51.4446"	"15428"	"15428"	"15410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.7"	""	"180.7"	""	"219.7"	""	"384.1"	""	"368.0"	"398.2"	""	"754"	"37"	"35.000"	"28.000"	"0.00802308420335483"	"23"	"0"	"1.792E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	""	"0.0270"	"2"	"2"	"2"	"839.50092"	"1677.99455"	"1677.99398"	"0.34"	"0.00029"	"10/100"	"10"	"100"	"2455732.77252197"	"HCD"	"MS2"	"2.651992"	"189.3"	"100.000"	"51.4446"	"15428"	"15428"	"15410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.7"	""	"180.7"	""	"219.7"	""	"384.1"	""	"368.0"	"398.2"	""	"754"	"36"	"35.000"	"28.000"	"0.0103357346281681"	"23"	"0"	"1.773E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"560.00305"	"1677.99460"	"1677.99398"	"0.37"	"0.00021"	"11/100"	"11"	"100"	"14882781.28302"	"HCD"	"MS2"	"23.09036"	"386.9"	"98.128"	"51.2168"	"15335"	"15335"	"15314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"485.4"	""	"397.5"	""	"439.0"	""	"808.9"	"1.5"	"778.2"	"762.4"	""	"754"	"33"	"35.000"	"28.000"	"0.0202927708008641"	"24"	"0.000523"	"0.003047"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.5455"	"0.0000"	"1"	"2"	"2"	"560.00305"	"1677.99460"	"1677.99398"	"0.37"	"0.00021"	"11/100"	"11"	"100"	"14882781.28302"	"HCD"	"MS2"	"23.09036"	"386.9"	"98.128"	"51.2168"	"15335"	"15335"	"15314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"485.4"	""	"397.5"	""	"439.0"	""	"808.9"	"1.5"	"778.2"	"762.4"	""	"754"	"33"	"35.000"	"28.000"	"0.0202927708008641"	"24"	"0.000523"	"0.003047"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLAGGIAAAVSK"	"[K].dFLAGGIAAAVSk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q05962"	"ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q05962"	"ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"839.50134"	"1677.99541"	"1677.99398"	"0.85"	"0.00072"	"10/118"	"10"	"118"	"1730726.64306641"	"HCD"	"MS2"	"0"	"118.8"	"100.000"	"63.7988"	"20504"	"20504"	"20483"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.8"	""	"143.6"	""	"145.2"	""	"220.1"	""	"241.7"	"264.1"	""	"767"	"88"	"35.000"	"28.000"	"5.50510197691126E-08"	""	"0"	"3.877E-07"	"1.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNIEFNPPK"	"[R].vYNIEFNPPk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.7027"	"0.0000"	"1"	"1"	"1"	"560.32324"	"1678.95517"	"1678.95686"	"-1.01"	"-0.00056"	"11/86"	"11"	"86"	"4991317.50006104"	"HCD"	"MS2"	"15.73041"	"128.6"	"100.000"	"52.6347"	"15965"	"15965"	"15942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.0"	"3.2"	"168.4"	""	"198.1"	""	"189.1"	"3.2"	"231.4"	"237.2"	""	"920"	"37"	"36.000"	"29.000"	"0.00837062394960592"	"26"	"0"	"0.0001309"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNIEFNPPK"	"[R].vYNIEFNPPk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"560.32373"	"1678.95664"	"1678.95686"	"-0.13"	"-0.00008"	"7/86"	"7"	"86"	"4136288.19000244"	"HCD"	"MS2"	"4.507312"	"115.0"	"100.000"	"52.4341"	"15833"	"15833"	"15810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.0"	""	"164.7"	""	"178.4"	""	"178.8"	"1.1"	"199.5"	"207.2"	""	"950"	"23"	"36.000"	"29.000"	"0.232109870687846"	"23"	"0.0001889"	"0.0006065"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNIEFNPPK"	"[R].vYNIEFNPPk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"839.98199"	"1678.95671"	"1678.95686"	"-0.09"	"-0.00008"	"12/86"	"12"	"86"	"885005.162719727"	"HCD"	"MS2"	"0"	"70.5"	"100.000"	"52.6138"	"15957"	"15957"	"15926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.1"	""	"108.4"	""	"104.1"	""	"105.7"	""	"113.3"	"133.3"	""	"950"	"35"	"36.000"	"29.000"	"0.0162440235194012"	"22"	"0"	"0.0001489"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNIEFNPPK"	"[R].vYNIEFNPPk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"839.98315"	"1678.95903"	"1678.95686"	"1.29"	"0.00108"	"11/86"	"11"	"86"	"851678.887817383"	"HCD"	"MS2"	"0"	"66.4"	"100.000"	"52.4064"	"15822"	"15822"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.3"	""	"83.4"	""	"101.2"	""	"108.0"	""	"117.0"	"119.0"	""	"949"	"32"	"36.000"	"29.000"	"0.0314946086905706"	"21"	"0.0001889"	"0.0004381"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVTVQTISGTGALR"	"[R].fVTVQTISGTGALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"560.32690"	"1678.96616"	"1678.96894"	"-1.65"	"-0.00093"	"11/136"	"11"	"136"	"10210277.6646729"	"HCD"	"MS2"	"40.1612"	"87.7"	"55.809"	"52.1099"	"15700"	"15700"	"15682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.5"	""	"116.2"	""	"127.8"	""	"149.6"	""	"161.6"	"184.0"	""	"891"	"35"	"36.000"	"29.000"	"0.013767266151848"	"21"	"0"	"0.000127"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVTVQTISGTGALR"	"[R].fVTVQTISGTGALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"560.32764"	"1678.96836"	"1678.96894"	"-0.34"	"-0.00019"	"12/136"	"12"	"136"	"8119283.11132813"	"HCD"	"MS2"	"25.9632"	"94.5"	"76.295"	"52.3100"	"15832"	"15832"	"15814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.9"	""	"134.9"	""	"133.0"	""	"153.4"	"1.2"	"164.4"	"183.7"	""	"921"	"30"	"36.000"	"29.000"	"0.0490037859892297"	"21"	"0"	"7.073E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVTVQTISGTGALR"	"[R].fVTVQTISGTGALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"839.98804"	"1678.96880"	"1678.96894"	"-0.08"	"-0.00007"	"13/136"	"13"	"136"	"4475185.15002441"	"HCD"	"MS2"	"42.22583"	"254.7"	"100.000"	"52.2779"	"15819"	"15819"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.8"	""	"353.3"	""	"393.9"	""	"421.5"	""	"464.5"	"507.4"	""	"911"	"54"	"36.000"	"29.000"	"0.000202529542332179"	"24"	"0"	"2.922E-06"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVTVQTISGTGALR"	"[R].fVTVQTISGTGALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"839.98853"	"1678.96977"	"1678.96894"	"0.50"	"0.00042"	"11/136"	"11"	"136"	"3700221.54486084"	"HCD"	"MS2"	"26.52884"	"201.7"	"100.000"	"52.0801"	"15688"	"15688"	"15666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.8"	""	"304.9"	""	"318.5"	""	"315.3"	""	"374.9"	"412.3"	""	"902"	"32"	"36.000"	"29.000"	"0.030915519013015"	"17"	"0"	"7.856E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEFIDGILASK"	"[R].qEFIDGILASk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"560.33099"	"1678.97843"	"1678.97799"	"0.26"	"0.00014"	"11/116"	"11"	"116"	"2656233.19934082"	"HCD"	"MS2"	"27.88358"	"86.1"	"100.000"	"64.7011"	"20820"	"20820"	"20793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.7"	""	"94.7"	""	"99.5"	""	"163.3"	""	"180.9"	"174.3"	""	"819"	"28"	"36.000"	"29.000"	"0.0676478356374781"	"16"	"0.0001889"	"0.0004168"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEFIDGILASK"	"[R].qEFIDGILASk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"839.99323"	"1678.97917"	"1678.97799"	"0.70"	"0.00059"	"15/116"	"15"	"116"	"857521.858032227"	"HCD"	"MS2"	"35.66348"	"78.7"	"100.000"	"64.6710"	"20808"	"20808"	"20777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.1"	""	"99.0"	""	"85.8"	""	"152.9"	""	"149.5"	"155.6"	""	"799"	"20"	"36.000"	"29.000"	"0.442096201699078"	"22"	"0"	"0.0001367"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEFIDGILASK"	"[R].qEFIDGILASk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"560.33136"	"1678.97953"	"1678.97799"	"0.91"	"0.00051"	"10/116"	"10"	"116"	"2629909.0534668"	"HCD"	"MS2"	"11.86344"	"88.4"	"100.000"	"64.6722"	"20861"	"20861"	"20835"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.5"	""	"87.9"	""	"107.3"	""	"167.7"	""	"194.2"	"176.6"	""	"822"	"19"	"36.000"	"29.000"	"0.462212644300407"	"14"	"0.0001889"	"0.0006074"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDmIVPILEk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"839.99506"	"1678.98284"	"1678.98539"	"-1.52"	"-0.00128"	"14/86"	"14"	"86"	"2533400.14318848"	"HCD"	"MS2"	"22.97906"	"168.1"	"100.000"	"72.4727"	"24036"	"24036"	"24015"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.5"	""	"178.2"	""	"206.3"	""	"415.4"	""	"317.2"	"294.5"	""	"823"	"41"	"36.000"	"29.000"	"0.00300863732853426"	"16"	"0.0001889"	"0.0004651"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDmIVPILEk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.99506"	"1678.98284"	"1678.98539"	"-1.52"	"-0.00128"	"14/86"	"14"	"86"	"1964926.18157959"	"HCD"	"MS2"	"11.26855"	"106.1"	"100.000"	"72.7811"	"24162"	"24162"	"24143"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.0"	""	"135.7"	""	"126.0"	""	"256.7"	"0.1"	"175.4"	"172.3"	""	"823"	"38"	"36.000"	"29.000"	"0.00601685907288939"	"15"	"0.0001889"	"0.0007411"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDmIVPILEk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"560.33270"	"1678.98355"	"1678.98539"	"-1.09"	"-0.00061"	"12/86"	"12"	"86"	"4216050.55841064"	"HCD"	"MS2"	"27.93278"	"105.3"	"100.000"	"72.5464"	"24066"	"24066"	"24047"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.0"	""	"123.5"	""	"121.6"	""	"258.3"	""	"197.6"	"195.6"	""	"837"	"27"	"36.000"	"29.000"	"0.0878406341296444"	"22"	"0.0001889"	"0.0004124"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDmIVPILEk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"839.99591"	"1678.98454"	"1678.98539"	"-0.50"	"-0.00042"	"14/86"	"14"	"86"	"1712173.71954346"	"HCD"	"MS2"	"27.11308"	"120.4"	"100.000"	"72.8385"	"24134"	"24134"	"24113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.5"	""	"138.9"	""	"142.7"	""	"303.8"	""	"211.5"	"192.1"	""	"848"	"25"	"36.000"	"29.000"	"0.123698905393649"	"18"	"0.0004166"	"0.002338"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDmIVPILEk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"560.33307"	"1678.98465"	"1678.98539"	"-0.44"	"-0.00024"	"12/86"	"12"	"86"	"4437413.35955811"	"HCD"	"MS2"	"27.84369"	"117.4"	"100.000"	"72.5643"	"24022"	"24022"	"24001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.7"	""	"133.1"	""	"144.7"	""	"275.9"	"0.6"	"224.8"	"214.5"	""	"848"	"29"	"36.000"	"29.000"	"0.0547476972012139"	"21"	"0.0001308"	"0.0002315"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDmIVPILEk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.99603"	"1678.98479"	"1678.98539"	"-0.36"	"-0.00030"	"14/86"	"14"	"86"	"2353854.29492188"	"HCD"	"MS2"	"33.07553"	"156.7"	"100.000"	"72.5202"	"24004"	"24004"	"23985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.8"	""	"159.5"	""	"190.5"	""	"409.1"	""	"283.6"	"273.6"	""	"842"	"41"	"36.000"	"29.000"	"0.00309943188045284"	"15"	"0.000523"	"0.002774"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDmIVPILEk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"560.33319"	"1678.98502"	"1678.98539"	"-0.22"	"-0.00012"	"11/86"	"11"	"86"	"2956896.31109619"	"HCD"	"MS2"	"7.838017"	"80.3"	"100.000"	"72.9584"	"24183"	"24183"	"24161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.8"	""	"83.7"	""	"95.9"	""	"200.4"	""	"160.5"	"138.6"	""	"843"	"28"	"36.000"	"29.000"	"0.0729117595409165"	"23"	"0.0001889"	"0.0006517"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDMIVPILEK"	"[K].fDmIVPILEk.[M]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"560.33319"	"1678.98502"	"1678.98539"	"-0.22"	"-0.00012"	"11/86"	"11"	"86"	"3309465.22045898"	"HCD"	"MS2"	"10.71936"	"81.0"	"100.000"	"72.9035"	"24212"	"24212"	"24191"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.8"	""	"91.7"	""	"103.0"	""	"212.3"	""	"148.5"	"134.5"	""	"843"	"31"	"36.000"	"29.000"	"0.0360410619480894"	"23"	"0.0001889"	"0.0004117"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDLLTDWEK"	"[R].tTDLLTDWEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"840.46735"	"1679.92742"	"1679.92562"	"1.07"	"0.00090"	"15/88"	"15"	"88"	"622658.795654297"	"HCD"	"MS2"	"39.33216"	"58.8"	"100.000"	"60.4124"	"19122"	"19122"	"19091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.0"	""	"76.9"	""	"77.4"	""	"103.1"	"2.4"	"104.8"	"108.2"	""	"1012"	"48"	"37.000"	"30.000"	"0.000849474833170015"	""	"0"	"2.841E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMEQVAQFLK"	"[K].qMEQVAQFLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"840.47919"	"1679.95110"	"1679.95548"	"-2.61"	"-0.00219"	"9/90"	"9"	"90"	"4194624.75756836"	"HCD"	"MS2"	"0"	"320.9"	"100.000"	"56.6800"	"17602"	"17602"	"17573"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"487.6"	""	"410.4"	""	"411.7"	""	"345.2"	""	"788.8"	"628.5"	""	"939"	"55"	"36.000"	"29.000"	"0.000150881362289163"	"25"	"0.0001859"	"0.0003649"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMEQVAQFLK"	"[K].qMEQVAQFLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"840.48004"	"1679.95281"	"1679.95548"	"-1.59"	"-0.00134"	"9/90"	"9"	"90"	"3111593.37365723"	"HCD"	"MS2"	"0"	"252.9"	"100.000"	"56.4610"	"17458"	"17458"	"17435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"393.9"	""	"317.1"	""	"316.8"	""	"267.3"	"3.6"	"598.4"	"505.2"	""	"919"	"68"	"36.000"	"29.000"	"7.36691257022074E-06"	"29"	"0"	"0.0001827"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMEQVAQFLK"	"[K].qMEQVAQFLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"560.65582"	"1679.95292"	"1679.95548"	"-1.53"	"-0.00086"	"7/90"	"7"	"90"	"8044097.32110596"	"HCD"	"MS2"	"7.298069"	"210.3"	"100.000"	"56.5094"	"17478"	"17478"	"17451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.8"	""	"262.3"	""	"266.5"	""	"244.8"	""	"491.8"	"427.6"	""	"919"	"44"	"36.000"	"29.000"	"0.00182930244869332"	"27"	"0.0001889"	"0.00062"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMEQVAQFLK"	"[K].qMEQVAQFLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.7358"	"0.0000"	"1"	"1"	"1"	"560.65607"	"1679.95365"	"1679.95548"	"-1.09"	"-0.00061"	"8/90"	"8"	"90"	"9725100.69085693"	"HCD"	"MS2"	"20.2727"	"243.1"	"100.000"	"56.7101"	"17614"	"17614"	"17589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"383.8"	""	"298.0"	""	"320.2"	""	"255.6"	"1.8"	"575.7"	"473.8"	""	"919"	"53"	"36.000"	"29.000"	"0.000221455013008746"	"29"	"0.0001889"	"0.0004072"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMEQVAQFLK"	"[K].qMEQVAQFLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"840.48163"	"1679.95598"	"1679.95548"	"0.30"	"0.00025"	"9/90"	"9"	"90"	"2340202.73718262"	"HCD"	"MS2"	"3.052339"	"193.2"	"100.000"	"56.9679"	"17719"	"17719"	"17701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"297.4"	""	"245.5"	""	"235.4"	""	"200.1"	"2.6"	"462.8"	"392.1"	""	"934"	"64"	"36.000"	"29.000"	"1.81684082712329E-05"	"29"	"0"	"0.0001047"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMEQVAQFLK"	"[K].qMEQVAQFLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"840.48163"	"1679.95598"	"1679.95548"	"0.30"	"0.00025"	"9/90"	"9"	"90"	"2552173.36126709"	"HCD"	"MS2"	"0"	"209.9"	"100.000"	"56.7629"	"17581"	"17581"	"17563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"316.4"	""	"257.2"	""	"271.1"	""	"228.2"	"6.0"	"469.3"	"445.3"	""	"934"	"58"	"36.000"	"29.000"	"8.09686466951183E-05"	"28"	"0"	"0.0001384"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPGSFDVVHVK"	"[R].hPGSFDVVHVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"420.74594"	"1679.96193"	"1679.96335"	"-0.84"	"-0.00035"	"11/84"	"11"	"84"	"4995916.15582275"	"HCD"	"MS2"	"18.84747"	"223.8"	"100.000"	"32.3890"	"7667"	"7667"	"7640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"311.2"	""	"298.4"	""	"372.2"	""	"356.5"	""	"400.4"	"381.9"	""	"873"	"15"	"36.000"	"29.000"	"1.31215230609722"	"13"	"0.0001308"	"0.0002372"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPGSFDVVHVK"	"[R].hPGSFDVVHVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"420.74622"	"1679.96303"	"1679.96335"	"-0.19"	"-0.00008"	"4/84"	"4"	"84"	"5056620.80371094"	"HCD"	"MS2"	"19.796"	"285.5"	"100.000"	"32.5208"	"7764"	"7764"	"7734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.7"	""	"413.8"	""	"447.7"	""	"465.7"	"0.3"	"537.4"	"472.2"	""	"863"	"11"	"36.000"	"29.000"	"3.31116482659625"	"13"	"0.0001889"	"0.0004789"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLQDLFNSSK"	"[R].lGLQDLFNSSk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"560.66205"	"1679.97159"	"1679.97324"	"-0.98"	"-0.00055"	"12/104"	"12"	"104"	"4536321.56329346"	"HCD"	"MS2"	"16.16453"	"85.6"	"100.000"	"66.6760"	"21679"	"21679"	"21651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.6"	""	"116.1"	""	"108.4"	""	"178.7"	""	"160.0"	"142.3"	""	"891"	"23"	"36.000"	"29.000"	"0.247085755122749"	"14"	"0.0001889"	"0.0006444"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLQDLFNSSK"	"[R].lGLQDLFNSSk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"560.66241"	"1679.97269"	"1679.97324"	"-0.33"	"-0.00018"	"12/104"	"12"	"104"	"2999256.89489746"	"HCD"	"MS2"	"9.307872"	"67.5"	"100.000"	"66.6975"	"21635"	"21635"	"21609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.6"	""	"90.3"	""	"78.0"	""	"144.1"	""	"133.2"	"113.7"	""	"882"	"26"	"36.000"	"29.000"	"0.123435076195875"	"14"	"0.0001308"	"0.000231"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLQDLFNSSK"	"[R].lGLQDLFNSSk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"2"	"2"	"0.9420"	"0.0000"	"1"	"1"	"1"	"840.49011"	"1679.97295"	"1679.97324"	"-0.18"	"-0.00015"	"10/104"	"10"	"104"	"1429450.41491699"	"HCD"	"MS2"	"12.10264"	"134.6"	"100.000"	"66.6623"	"21673"	"21673"	"21651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.4"	""	"174.7"	""	"169.4"	""	"308.7"	"0.6"	"245.0"	"218.9"	""	"884"	"69"	"36.000"	"29.000"	"5.64185953494614E-06"	"21"	"0"	"6.226E-06"	"1.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYIASAGADALAK"	"[K].aYIASAGADALAk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P58405"	"Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2"	"P58405"	"Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2"	"0"	"2"	"2"	"0.9634"	"0.0000"	"1"	"1"	"1"	"840.49036"	"1679.97344"	"1679.97324"	"0.12"	"0.00010"	"11/104"	"11"	"104"	"339558.443603516"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"44.7060"	"12686"	"12686"	"12657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.4"	""	"45.0"	""	"47.1"	""	"47.6"	"1.7"	"76.9"	"68.4"	""	"888"	"82"	"36.000"	"29.000"	"2.60245345044229E-07"	"21"	"0"	"2.898E-06"	"1.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEFGGPEVLK"	"[R].vFEFGGPEVLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT0"	"Quinone oxidoreductase OS=Rattus norvegicus OX=10116 GN=Cryz PE=2 SV=1"	"Q6AYT0"	"Quinone oxidoreductase OS=Rattus norvegicus OX=10116 GN=Cryz PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"840.49139"	"1679.97551"	"1679.97726"	"-1.04"	"-0.00088"	"15/90"	"15"	"90"	"1332886.140625"	"HCD"	"MS2"	"52.67257"	"124.8"	"100.000"	"65.6243"	"21250"	"21250"	"21219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.5"	""	"135.4"	""	"121.6"	""	"311.7"	"4.3"	"258.4"	"222.9"	""	"827"	"8"	"36.000"	"29.000"	"6.46361550232034"	"13"	"0.002772"	"0.04438"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPVPDSFFAK"	"[K].lTPVPDSFFAk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"840.49176"	"1679.97624"	"1679.97726"	"-0.61"	"-0.00051"	"3/90"	"3"	"90"	"262036.392150879"	"HCD"	"MS2"	"0"	"31.5"	"100.000"	"64.9824"	"20935"	"20935"	"20905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.2"	""	"36.7"	""	"42.3"	""	"52.8"	""	"64.7"	"59.9"	""	"850"	"4"	"36.000"	"29.000"	"17.2738414895216"	"15"	"0.008214"	"0.3478"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPVPDSFFAK"	"[K].lTPVPDSFFAk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"840.49219"	"1679.97710"	"1679.97726"	"-0.10"	"-0.00008"	"9/90"	"9"	"90"	"1080883.81866455"	"HCD"	"MS2"	"21.42228"	"93.9"	"100.000"	"64.7551"	"20895"	"20895"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.3"	""	"111.1"	""	"110.1"	""	"182.2"	""	"188.7"	"177.3"	""	"839"	"47"	"36.000"	"29.000"	"0.000829338764026926"	"23"	"0"	"0.0001578"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIYWLAEVK"	"[K].tVIYWLAEVk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6PEC0"	"Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Rattus norvegicus OX=10116 GN=Nudt2 PE=2 SV=3"	"Q6PEC0"	"Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Rattus norvegicus OX=10116 GN=Nudt2 PE=2 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"840.51038"	"1680.01348"	"1680.01365"	"-0.10"	"-0.00009"	"8/86"	"8"	"86"	"310888.329467773"	"HCD"	"MS2"	"16.28981"	"26.7"	"100.000"	"78.1632"	"26296"	"26296"	"26273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.5"	""	"39.7"	""	"34.5"	""	"48.5"	""	"48.6"	"46.4"	""	"490"	"12"	"33.000"	"26.000"	"1.60016985398631"	"21"	"0.0003839"	"0.001763"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KALEEAGFK"	"[R].kALEEAGFk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"560.68066"	"1680.02744"	"1680.02992"	"-1.48"	"-0.00083"	"11/82"	"11"	"82"	"22304848.9683838"	"HCD"	"MS2"	"31.26639"	"601.8"	"46.069"	"36.6706"	"9411"	"9411"	"9386"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1004.6"	""	"966.0"	""	"981.0"	""	"728.2"	""	"984.3"	"1026.1"	""	"385"	"24"	"32.000"	"25.000"	"0.0836432181530274"	"14"	"0.0001308"	"0.0002371"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KALEEAGFK"	"[R].kALEEAGFk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"560.68091"	"1680.02817"	"1680.02992"	"-1.04"	"-0.00058"	"8/82"	"8"	"82"	"21370304.9752197"	"HCD"	"MS2"	"11.18315"	"541.3"	"44.320"	"36.8192"	"9515"	"9515"	"9494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"863.5"	""	"854.9"	""	"877.8"	""	"691.7"	""	"912.2"	"918.7"	""	"382"	"18"	"32.000"	"25.000"	"0.324364537620193"	"14"	"0.0001308"	"0.0002516"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWTAADFAAQITR"	"[K].tWTAADFAAQITR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8592"	"0.0000"	"1"	"1"	"1"	"560.96863"	"1680.89133"	"1680.89069"	"0.38"	"0.00021"	"11/124"	"11"	"124"	"6927576.47558594"	"HCD"	"MS2"	"19.64419"	"69.6"	"100.000"	"60.9776"	"19299"	"19299"	"19273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.5"	""	"84.9"	""	"84.1"	""	"125.6"	"2.7"	"130.3"	"138.1"	""	"1046"	"71"	"37.000"	"30.000"	"3.91292648767333E-06"	"27"	"0"	"2.177E-06"	"1.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDTGENPIYK"	"[K].wDTGENPIYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"840.95361"	"1680.89995"	"1680.89974"	"0.12"	"0.00010"	"6/86"	"6"	"86"	"641250.590698242"	"HCD"	"MS2"	"8.272862"	"66.7"	"100.000"	"47.1932"	"13699"	"13699"	"13672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.9"	""	"72.6"	""	"66.5"	""	"127.4"	""	"159.3"	"140.4"	""	"1067"	"30"	"37.000"	"30.000"	"0.0513020150517685"	"21"	"0.0001308"	"0.0002974"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDTGENPIYK"	"[K].wDTGENPIYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"840.95380"	"1680.90032"	"1680.89974"	"0.34"	"0.00029"	"8/86"	"8"	"86"	"716937.982116699"	"HCD"	"MS2"	"0"	"76.1"	"100.000"	"47.4590"	"13856"	"13856"	"13826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.5"	""	"87.3"	""	"74.2"	""	"137.7"	""	"192.7"	"149.2"	""	"1063"	"55"	"37.000"	"30.000"	"0.000153639635747725"	"22"	"0"	"3.738E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].SFNTVPYIVGINk.[Q]"	"K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"840.97882"	"1680.95036"	"1680.95222"	"-1.11"	"-0.00093"	"11/122"	"11"	"122"	"900548.700683594"	"HCD"	"MS2"	"0"	"49.1"	"100.000"	"57.4074"	"17845"	"17845"	"17819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.7"	""	"68.9"	""	"72.8"	""	"84.8"	""	"82.3"	"89.1"	""	"931"	"31"	"36.000"	"29.000"	"0.0366369815103069"	"22"	"0.0004166"	"0.002307"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].SFNTVPYIVGINk.[Q]"	"K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"840.97986"	"1680.95244"	"1680.95222"	"0.13"	"0.00011"	"7/122"	"7"	"122"	"782034.987792969"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"57.6503"	"17998"	"17998"	"17973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.5"	""	"59.8"	""	"60.9"	""	"75.1"	"0.1"	"80.1"	"76.5"	""	"938"	"22"	"36.000"	"29.000"	"0.310579540236126"	"22"	"0.0006737"	"0.006513"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHLIAQELPFDR"	"[K].lHLIAQELPFDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"0"	"3"	"3"	"0.7455"	"0.0000"	"1"	"1"	"1"	"560.99255"	"1680.96311"	"1680.96346"	"-0.21"	"-0.00012"	"8/108"	"8"	"108"	"3739772.82873535"	"HCD"	"MS2"	"30.39325"	"74.7"	"100.000"	"56.2767"	"17437"	"17437"	"17413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.4"	""	"89.3"	""	"107.7"	""	"120.9"	""	"151.4"	"153.3"	""	"854"	"55"	"36.000"	"29.000"	"0.000147716114331754"	""	"0"	"2.824E-06"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHLIAQELPFDR"	"[K].lHLIAQELPFDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"0"	"3"	"3"	"0.5750"	"0.0000"	"1"	"1"	"1"	"560.99268"	"1680.96347"	"1680.96346"	"0.01"	"0.00001"	"7/108"	"7"	"108"	"2631231.17150879"	"HCD"	"MS2"	"15.49312"	"55.3"	"100.000"	"56.0825"	"17304"	"17304"	"17275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.6"	""	"66.3"	""	"74.6"	""	"92.5"	""	"116.4"	"117.1"	""	"859"	"40"	"36.000"	"29.000"	"0.00426543342796791"	""	"0"	"1.533E-05"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLEKPVTMLL"	"[K].yLEkPVTmLL.[-]"	"N-Term(TMT6plex); K4(TMT6plex); M8(Oxidation)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.00421"	"1681.00115"	"1681.00104"	"0.06"	"0.00005"	"9/80"	"9"	"80"	"980750.692077637"	"HCD"	"MS2"	"7.436714"	"70.8"	"100.000"	"61.8813"	"19721"	"19721"	"19699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.2"	""	"91.4"	""	"84.2"	""	"141.7"	"1.0"	"124.1"	"138.0"	""	"551"	"13"	"34.000"	"27.000"	"1.25927796238898"	"13"	"0.006657"	"0.2446"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNFLSFPGLK"	"[K].sLNFLSFPGLk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"561.00824"	"1681.01017"	"1681.00890"	"0.75"	"0.00042"	"10/106"	"10"	"106"	"417703.268066406"	"HCD"	"MS2"	"5.944227"	"17.5"	"100.000"	"78.2785"	"26343"	"26343"	"26321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.9"	""	"24.9"	""	"30.5"	""	"26.2"	""	"32.0"	"27.5"	""	"465"	"28"	"33.000"	"26.000"	"0.0338394236235307"	"18"	"0.0001308"	"0.0002876"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNFLSFPGLK"	"[K].sLNFLSFPGLk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.00922"	"1681.01116"	"1681.00890"	"1.34"	"0.00113"	"9/106"	"9"	"106"	"282723.481872559"	"HCD"	"MS2"	"24.54764"	"26.6"	"100.000"	"78.2016"	"26363"	"26363"	"26335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.0"	""	"32.8"	""	"39.9"	""	"44.4"	""	"47.3"	"53.3"	""	"456"	"21"	"33.000"	"26.000"	"0.202271570744655"	"14"	"0.000523"	"0.002891"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNFLSFPGLK"	"[K].sLNFLSFPGLk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"561.00885"	"1681.01200"	"1681.00890"	"1.84"	"0.00103"	"10/106"	"10"	"106"	"715677.124694824"	"HCD"	"MS2"	"39.93864"	"25.6"	"100.000"	"78.2062"	"26365"	"26365"	"26335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.3"	""	"28.5"	""	"42.1"	""	"39.8"	""	"50.5"	"48.4"	""	"454"	"27"	"33.000"	"26.000"	"0.0431544769542589"	"15"	"0.0001889"	"0.0004408"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLAISNMPLVK"	"[R].hLAISNMPLVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.01160"	"1681.02024"	"1681.02350"	"-1.94"	"-0.00109"	"9/90"	"9"	"90"	"2706442.94537354"	"HCD"	"MS2"	"14.59254"	"139.4"	"100.000"	"44.4953"	"12651"	"12651"	"12620"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.4"	""	"190.4"	""	"196.9"	""	"216.3"	""	"253.6"	"288.6"	""	"399"	"27"	"32.000"	"26.000"	"0.0372342748321517"	"14"	"0"	"0.0001364"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLAISNMPLVK"	"[R].hLAISNMPLVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.01233"	"1681.02243"	"1681.02350"	"-0.64"	"-0.00036"	"11/90"	"11"	"90"	"4886221.5569458"	"HCD"	"MS2"	"21.67201"	"200.5"	"100.000"	"44.1191"	"12447"	"12447"	"12422"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.3"	""	"269.2"	""	"283.8"	""	"299.7"	""	"354.1"	"414.6"	""	"379"	"32"	"32.000"	"25.000"	"0.010754970272492"	"15"	"0"	"6.388E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSSAMSAAK"	"[R].kLSSAMSAAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"561.01379"	"1681.02683"	"1681.02854"	"-1.02"	"-0.00057"	"11/98"	"11"	"98"	"23549010.1077271"	"HCD"	"MS2"	"12.16729"	"1010.4"	"75.644"	"32.6803"	"7786"	"7786"	"7768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1941.2"	""	"1566.7"	""	"1692.3"	""	"1080.4"	""	"1540.9"	"1719.9"	""	"359"	"39"	"32.000"	"25.000"	"0.00246640534514747"	"23"	"0"	"8.108E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSSAMSAAK"	"[R].kLSSAMSAAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"561.01385"	"1681.02701"	"1681.02854"	"-0.91"	"-0.00051"	"11/98"	"11"	"98"	"28732739.1948853"	"HCD"	"MS2"	"12.24365"	"1092.0"	"67.452"	"32.7716"	"7866"	"7866"	"7846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2065.2"	""	"1718.2"	""	"1857.7"	""	"1180.7"	"0.9"	"1642.6"	"1844.6"	""	"359"	"39"	"32.000"	"25.000"	"0.00219818607768076"	"20"	"0"	"9.653E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSSAMSAAK"	"[R].kLSSAMSAAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"841.01740"	"1681.02751"	"1681.02854"	"-0.61"	"-0.00051"	"9/98"	"9"	"98"	"1110522.41259766"	"HCD"	"MS2"	"0"	"104.2"	"100.000"	"32.7421"	"7812"	"7812"	"7784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.3"	""	"156.8"	""	"185.4"	""	"98.9"	""	"156.5"	"183.1"	""	"330"	"49"	"32.000"	"25.000"	"0.000230931908224482"	"18"	"0"	"5.172E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSSAMSAAK"	"[R].kLSSAMSAAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"841.01740"	"1681.02751"	"1681.02854"	"-0.61"	"-0.00051"	"15/98"	"15"	"98"	"1165472.87078857"	"HCD"	"MS2"	"0"	"105.3"	"100.000"	"32.8216"	"7887"	"7887"	"7862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"217.4"	""	"170.8"	""	"178.8"	""	"114.2"	"1.2"	"145.8"	"164.5"	""	"330"	"43"	"32.000"	"25.000"	"0.000773542080539687"	"16"	"0"	"6.193E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALDDMVSTLK"	"[R].mALDDMVSTLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.6383"	"0.0000"	"1"	"1"	"1"	"561.31354"	"1681.92606"	"1681.92689"	"-0.49"	"-0.00028"	"11/90"	"11"	"90"	"3293550.6451416"	"HCD"	"MS2"	"2.257247"	"102.8"	"100.000"	"65.4017"	"21106"	"21106"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.3"	""	"133.4"	""	"133.6"	""	"133.4"	""	"225.6"	"213.4"	""	"982"	"47"	"36.000"	"29.000"	"0.000961792734691442"	""	"0"	"9.638E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALDDMVSTLK"	"[R].mALDDMVSTLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"561.31354"	"1681.92606"	"1681.92689"	"-0.49"	"-0.00028"	"11/90"	"11"	"90"	"3325654.46380615"	"HCD"	"MS2"	"7.314058"	"100.7"	"100.000"	"65.4032"	"21159"	"21159"	"21139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.0"	""	"139.3"	""	"130.6"	""	"127.8"	""	"202.0"	"206.7"	""	"982"	"42"	"36.000"	"29.000"	"0.00296538777023803"	"27"	"0"	"0.0001662"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALDDMVSTLK"	"[R].mALDDMVSTLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"841.46674"	"1681.92620"	"1681.92689"	"-0.41"	"-0.00035"	"10/90"	"10"	"90"	"1643697.71154785"	"HCD"	"MS2"	"0"	"146.9"	"100.000"	"65.2857"	"21111"	"21111"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"227.4"	""	"187.5"	""	"195.9"	""	"178.1"	""	"306.0"	"299.6"	""	"981"	"75"	"36.000"	"29.000"	"1.42770674641167E-06"	""	"0"	"1.048E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALDDMVSTLK"	"[R].mALDDMVSTLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"841.46716"	"1681.92705"	"1681.92689"	"0.10"	"0.00008"	"10/90"	"10"	"90"	"917107.110351563"	"HCD"	"MS2"	"0"	"85.8"	"100.000"	"65.2865"	"21059"	"21059"	"21033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.7"	""	"126.8"	""	"106.9"	""	"112.3"	"0.6"	"181.6"	"157.9"	""	"975"	"77"	"36.000"	"29.000"	"9.99941562177464E-07"	""	"0"	"1.427E-06"	"1.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVAGTNFFIK"	"[R].qVVAGTNFFIk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"561.33868"	"1682.00150"	"1682.00415"	"-1.58"	"-0.00088"	"9/100"	"9"	"100"	"8533202.93670654"	"HCD"	"MS2"	"28.01471"	"166.7"	"78.142"	"56.8113"	"17601"	"17601"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.5"	""	"212.5"	""	"258.3"	""	"277.1"	""	"304.1"	"337.4"	""	"538"	"44"	"34.000"	"27.000"	"0.00109585294729306"	"26"	"0.0001308"	"0.0002155"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVAGTNFFIK"	"[R].qVVAGTNFFIk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"841.50507"	"1682.00286"	"1682.00415"	"-0.77"	"-0.00065"	"10/100"	"10"	"100"	"3334493.91912842"	"HCD"	"MS2"	"21.47614"	"265.7"	"100.000"	"56.8090"	"17600"	"17600"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"331.0"	""	"337.8"	""	"413.5"	""	"413.1"	""	"485.0"	"542.5"	""	"535"	"78"	"34.000"	"27.000"	"4.64861721690459E-07"	"21"	"0"	"6.114E-06"	"1.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVAGTNFFIK"	"[R].qVVAGTNFFIk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"561.33917"	"1682.00296"	"1682.00415"	"-0.70"	"-0.00039"	"9/100"	"9"	"100"	"8303521.34106445"	"HCD"	"MS2"	"30.14428"	"208.9"	"100.000"	"57.0188"	"17740"	"17740"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.7"	""	"269.9"	""	"318.6"	""	"350.5"	""	"379.5"	"412.3"	""	"544"	"42"	"34.000"	"27.000"	"0.00168876377310577"	"24"	"0"	"0.0001804"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVAGTNFFIK"	"[R].qVVAGTNFFIk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"841.50549"	"1682.00371"	"1682.00415"	"-0.26"	"-0.00022"	"10/100"	"10"	"100"	"3119815.8605957"	"HCD"	"MS2"	"24.84499"	"244.3"	"100.000"	"57.0234"	"17742"	"17742"	"17717"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"301.1"	""	"299.4"	""	"376.3"	""	"383.9"	""	"448.4"	"507.9"	""	"530"	"78"	"34.000"	"27.000"	"4.56295172371292E-07"	"20"	"0"	"7.178E-06"	"1.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVPNILLEQGK"	"[K].iVPNILLEQGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.53320"	"1682.05913"	"1682.06166"	"-1.51"	"-0.00127"	"10/94"	"10"	"94"	"1251194.05438232"	"HCD"	"MS2"	"0"	"86.9"	"100.000"	"63.7342"	"20478"	"20478"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.6"	""	"137.5"	""	"137.0"	""	"128.7"	"0.9"	"104.4"	"126.8"	""	"197"	"46"	"29.000"	"22.000"	"0.00026087726365276"	"15"	"0.0001889"	"0.0007916"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVPNILLEQGK"	"[K].iVPNILLEQGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.53394"	"1682.06059"	"1682.06166"	"-0.64"	"-0.00053"	"8/94"	"8"	"94"	"1399124.50964355"	"HCD"	"MS2"	"4.115426"	"88.7"	"100.000"	"64.0195"	"20541"	"20541"	"20521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.0"	""	"138.6"	""	"131.5"	""	"131.5"	"0.3"	"109.1"	"141.8"	""	"201"	"65"	"30.000"	"23.000"	"3.46071680417156E-06"	"17"	"0"	"2.665E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVPNILLEQGK"	"[K].iVPNILLEQGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.53406"	"1682.06084"	"1682.06166"	"-0.49"	"-0.00041"	"9/94"	"9"	"94"	"1749133.2354126"	"HCD"	"MS2"	"0"	"103.2"	"100.000"	"64.0267"	"20597"	"20597"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.4"	""	"164.5"	""	"150.2"	""	"154.9"	""	"128.3"	"156.0"	""	"201"	"62"	"30.000"	"23.000"	"7.06587681483253E-06"	"16"	"0"	"0.0001157"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVPNILLEQGK"	"[K].iVPNILLEQGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.35852"	"1682.06101"	"1682.06166"	"-0.39"	"-0.00022"	"12/94"	"12"	"94"	"8439284.21362305"	"HCD"	"MS2"	"14.24473"	"220.0"	"100.000"	"63.8259"	"20462"	"20462"	"20441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.1"	""	"360.0"	""	"340.9"	""	"326.2"	""	"262.8"	"307.3"	""	"201"	"38"	"30.000"	"23.000"	"0.00156014894500787"	"15"	"0"	"0.000121"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVPNILLEQGK"	"[K].iVPNILLEQGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.35870"	"1682.06156"	"1682.06166"	"-0.06"	"-0.00004"	"11/94"	"11"	"94"	"8951036.93359375"	"HCD"	"MS2"	"12.61907"	"227.0"	"100.000"	"63.9163"	"20552"	"20552"	"20531"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"479.9"	""	"356.2"	""	"340.4"	""	"344.9"	""	"285.4"	"334.6"	""	"189"	"35"	"29.000"	"22.000"	"0.00296778071571303"	"15"	"0"	"8.769E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVPNILLEQGK"	"[K].iVPNILLEQGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.53448"	"1682.06169"	"1682.06166"	"0.02"	"0.00001"	"8/94"	"8"	"94"	"1619755.2925415"	"HCD"	"MS2"	"13.94507"	"101.1"	"100.000"	"63.7267"	"20422"	"20422"	"20393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.2"	""	"163.6"	""	"152.7"	""	"141.2"	""	"121.3"	"146.2"	""	"189"	"65"	"29.000"	"22.000"	"3.12918909801049E-06"	"17"	"0"	"9.387E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.54614"	"1682.08501"	"1682.08682"	"-1.07"	"-0.00090"	"6/82"	"6"	"82"	"92024.0266723633"	"HCD"	"MS2"	"39.24152"	"5.2"	"100.000"	"89.9778"	"31062"	"31062"	"31046"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.7"	""	"6.8"	""	"7.0"	""	"9.9"	""	"9.3"	"10.4"	""	"118"	"20"	"27.000"	"20.000"	"0.0594089684622565"	"14"	"0.00109"	"0.01492"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"561.36652"	"1682.08500"	"1682.08682"	"-1.08"	"-0.00061"	"7/82"	"7"	"82"	"339848.838256836"	"HCD"	"MS2"	"17.95506"	"8.6"	"100.000"	"90.5486"	"31268"	"31268"	"31259"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.8"	""	"10.3"	""	"11.1"	""	"16.3"	""	"16.4"	"19.1"	""	"118"	"36"	"27.000"	"20.000"	"0.00137357384202236"	"19"	"0.0001308"	"0.0002946"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"561.36670"	"1682.08554"	"1682.08682"	"-0.76"	"-0.00042"	"7/82"	"7"	"82"	"1135298.90203857"	"HCD"	"MS2"	"20.11748"	"27.5"	"100.000"	"90.2693"	"31168"	"31168"	"31161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.2"	""	"31.6"	""	"39.4"	""	"52.3"	""	"51.9"	"58.8"	""	"119"	"32"	"27.000"	"20.000"	"0.00376285051568851"	"18"	"0"	"5.702E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.54651"	"1682.08574"	"1682.08682"	"-0.64"	"-0.00054"	"8/82"	"8"	"82"	"203128.276855469"	"HCD"	"MS2"	"15.89919"	"13.2"	"100.000"	"90.4835"	"31244"	"31244"	"31240"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.4"	""	"14.9"	""	"19.5"	""	"21.8"	""	"29.6"	"30.3"	""	"119"	"42"	"27.000"	"20.000"	"0.000336912376977761"	"15"	"0"	"0.0001707"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"561.36682"	"1682.08591"	"1682.08682"	"-0.54"	"-0.00030"	"6/82"	"6"	"82"	"262738.545227051"	"HCD"	"MS2"	"10.06189"	"8.1"	"100.000"	"90.4374"	"31200"	"31200"	"31187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"11.7"	""	"10.9"	""	"15.8"	""	"14.5"	"17.6"	""	"119"	"20"	"27.000"	"20.000"	"0.0640496802109752"	"16"	"0.0003839"	"0.001696"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"841.54663"	"1682.08599"	"1682.08682"	"-0.49"	"-0.00042"	"9/82"	"9"	"82"	"413746.377319336"	"HCD"	"MS2"	"9.491591"	"25.7"	"100.000"	"90.1450"	"31091"	"31091"	"31087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.5"	""	"31.3"	""	"31.7"	""	"48.1"	""	"49.8"	"55.6"	""	"119"	"53"	"27.000"	"20.000"	"3.04450692146483E-05"	"19"	"0"	"0.0001149"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.54669"	"1682.08611"	"1682.08682"	"-0.42"	"-0.00035"	"8/82"	"8"	"82"	"167547.239440918"	"HCD"	"MS2"	"16.25111"	"8.5"	"100.000"	"90.4354"	"31199"	"31199"	"31187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.7"	""	"9.8"	""	"12.5"	""	"18.5"	""	"15.7"	"15.9"	""	"119"	"39"	"27.000"	"20.000"	"0.000830839174828283"	"15"	"0.0001308"	"0.0002592"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"2"	"2"	"0.9508"	"0.0000"	"1"	"1"	"1"	"841.54675"	"1682.08623"	"1682.08682"	"-0.35"	"-0.00029"	"9/82"	"9"	"82"	"394727.158996582"	"HCD"	"MS2"	"8.429398"	"23.5"	"100.000"	"90.2301"	"31156"	"31156"	"31152"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.9"	""	"30.9"	""	"34.7"	""	"45.9"	"1.8"	"37.8"	"50.0"	""	"108"	"61"	"27.000"	"20.000"	"4.12471323131954E-06"	"20"	"0"	"4.208E-05"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"561.36694"	"1682.08628"	"1682.08682"	"-0.32"	"-0.00018"	"7/82"	"7"	"82"	"1111944.20977783"	"HCD"	"MS2"	"26.15672"	"26.2"	"100.000"	"90.1494"	"31092"	"31092"	"31087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.4"	""	"28.9"	""	"41.1"	""	"54.3"	""	"44.6"	"52.9"	""	"108"	"34"	"27.000"	"20.000"	"0.00234635521052649"	"18"	"0"	"0.0001567"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.54718"	"1682.08708"	"1682.08682"	"0.16"	"0.00013"	"7/82"	"7"	"82"	"112924.722351074"	"HCD"	"MS2"	"39.31657"	"8.0"	"100.000"	"89.8836"	"30993"	"30993"	"30973"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.7"	""	"8.5"	""	"9.4"	""	"18.0"	""	"14.1"	"17.4"	""	"111"	"28"	"27.000"	"20.000"	"0.00966702814732346"	"14"	"0.0001889"	"0.0009521"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"561.36755"	"1682.08811"	"1682.08682"	"0.77"	"0.00043"	"6/82"	"6"	"82"	"331085.065246582"	"HCD"	"MS2"	"20.03779"	"8.4"	"100.000"	"90.0033"	"31072"	"31072"	"31054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.5"	""	"9.2"	""	"15.7"	""	"16.7"	""	"15.2"	"13.4"	""	"111"	"22"	"27.000"	"20.000"	"0.0323812032871928"	"18"	"0.0002277"	"0.001306"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVLLEELLPK"	"[R].gIVLLEELLPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"P84817"	"Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"561.36755"	"1682.08811"	"1682.08682"	"0.77"	"0.00043"	"6/82"	"6"	"82"	"340990.092529297"	"HCD"	"MS2"	"19.00178"	"10.8"	"100.000"	"89.8882"	"30995"	"30995"	"30973"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.3"	""	"13.4"	""	"18.0"	""	"19.9"	""	"18.1"	"20.3"	""	"111"	"29"	"27.000"	"20.000"	"0.00740104394850645"	"17"	"0.0001889"	"0.0007786"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHGMEMPFTK"	"[R].fHGMEMPFTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"561.63055"	"1682.87711"	"1682.87988"	"-1.64"	"-0.00092"	"5/80"	"5"	"80"	"6492001.3538208"	"HCD"	"MS2"	"62.15155"	"178.4"	"100.000"	"47.4257"	"13794"	"13794"	"13768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.0"	""	"257.3"	""	"263.9"	""	"278.6"	""	"317.2"	"345.3"	""	"942"	"6"	"36.000"	"29.000"	"11.4820889545168"	"14"	"0.001488"	"0.02044"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVMDYNNLEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"841.96118"	"1682.91509"	"1682.91876"	"-2.18"	"-0.00184"	"18/90"	"18"	"90"	"1349583.91070557"	"HCD"	"MS2"	"0"	"124.2"	"100.000"	"46.4018"	"13423"	"13423"	"13404"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.0"	""	"237.6"	""	"199.4"	""	"102.1"	"1.0"	"191.0"	"213.2"	""	"968"	"59"	"36.000"	"29.000"	"6.80527001678878E-05"	"23"	"0"	"1.266E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVMDYNNLEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"561.64374"	"1682.91666"	"1682.91876"	"-1.25"	"-0.00070"	"6/90"	"6"	"90"	"3487842.24615479"	"HCD"	"MS2"	"34.99494"	"168.7"	"100.000"	"46.5829"	"13497"	"13497"	"13474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"221.0"	""	"226.3"	""	"224.8"	""	"235.3"	""	"347.0"	"348.2"	""	"969"	"26"	"36.000"	"29.000"	"0.125398915739167"	"23"	"0.0001889"	"0.0008647"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVMDYNNLEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"561.64392"	"1682.91721"	"1682.91876"	"-0.92"	"-0.00052"	"6/90"	"6"	"90"	"3354640.83947754"	"HCD"	"MS2"	"36.09572"	"170.8"	"100.000"	"46.3302"	"13346"	"13346"	"13320"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.4"	""	"224.3"	""	"234.2"	""	"262.0"	"1.8"	"319.4"	"331.6"	""	"962"	"22"	"36.000"	"29.000"	"0.317793548491654"	"16"	"0.0004557"	"0.002571"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVMDYNNLEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"841.96246"	"1682.91765"	"1682.91876"	"-0.66"	"-0.00056"	"18/90"	"18"	"90"	"1192525.15368652"	"HCD"	"MS2"	"0"	"113.2"	"100.000"	"46.1102"	"13256"	"13256"	"13229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"227.5"	""	"184.8"	""	"195.1"	""	"103.9"	"2.1"	"178.1"	"177.3"	""	"960"	"63"	"36.000"	"29.000"	"2.66220342219797E-05"	"25"	"0"	"1.207E-05"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAQNLSIFLGSFR"	"[K].tAQNLSIFLGSFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"841.97369"	"1682.94011"	"1682.94272"	"-1.55"	"-0.00131"	"14/136"	"14"	"136"	"404556.686584473"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"71.7911"	"23758"	"23758"	"23738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.6"	""	"44.2"	""	"44.9"	""	"60.7"	""	"69.6"	"64.3"	""	"916"	"37"	"36.000"	"29.000"	"0.00922285706436973"	"18"	"0"	"0.0001325"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAQNLSIFLGSFR"	"[K].tAQNLSIFLGSFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"561.65167"	"1682.94046"	"1682.94272"	"-1.34"	"-0.00075"	"10/136"	"10"	"136"	"1093378.92626953"	"HCD"	"MS2"	"7.69344"	"22.6"	"100.000"	"71.7315"	"23734"	"23734"	"23706"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.2"	""	"32.5"	""	"31.4"	""	"31.7"	""	"49.4"	"45.2"	""	"917"	"31"	"36.000"	"29.000"	"0.0332919581484019"	"19"	"0"	"5.781E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAQNLSIFLGSFR"	"[K].tAQNLSIFLGSFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"561.65240"	"1682.94266"	"1682.94272"	"-0.04"	"-0.00002"	"8/136"	"8"	"136"	"1203081.39916992"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"71.7907"	"23706"	"23706"	"23683"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.9"	""	"25.9"	""	"38.9"	""	"39.3"	"1.4"	"49.5"	"51.6"	""	"909"	"47"	"36.000"	"29.000"	"0.0009650146079791"	"23"	"0"	"1.486E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGFIPSNYVAK"	"[R].eGFIPSNYVAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"841.97827"	"1682.94927"	"1682.95178"	"-1.49"	"-0.00126"	"8/98"	"8"	"98"	"1927223.56866455"	"HCD"	"MS2"	"0"	"134.0"	"100.000"	"48.4843"	"14227"	"14227"	"14208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.7"	""	"164.9"	""	"128.9"	""	"242.1"	"1.5"	"288.9"	"289.7"	""	"863"	"45"	"36.000"	"29.000"	"0.00135201279004218"	"17"	"0"	"3.013E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGFIPSNYVAK"	"[R].eGFIPSNYVAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"841.97949"	"1682.95171"	"1682.95178"	"-0.04"	"-0.00004"	"8/98"	"8"	"98"	"1832492.49645996"	"HCD"	"MS2"	"0"	"132.2"	"100.000"	"48.7452"	"14382"	"14382"	"14351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.8"	""	"166.5"	""	"130.9"	""	"248.7"	"1.4"	"271.9"	"294.0"	""	"839"	"45"	"36.000"	"29.000"	"0.00132657547844064"	"17"	"0.0001308"	"0.0002636"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLMAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"561.65594"	"1682.95328"	"1682.95515"	"-1.11"	"-0.00062"	"8/98"	"8"	"98"	"12155931.7442017"	"HCD"	"MS2"	"24.1412"	"232.3"	"100.000"	"61.1364"	"19417"	"19417"	"19395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"612.5"	""	"451.9"	""	"364.7"	""	"242.7"	""	"242.5"	"269.3"	""	"828"	"54"	"36.000"	"29.000"	"0.000156675230072877"	"24"	"0"	"0.0001371"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLMAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9028"	"0.0000"	"1"	"1"	"1"	"841.98041"	"1682.95354"	"1682.95515"	"-0.96"	"-0.00081"	"10/98"	"10"	"98"	"3259145.69403076"	"HCD"	"MS2"	"1.20899"	"275.3"	"100.000"	"61.5145"	"19572"	"19572"	"19555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"696.5"	""	"525.6"	""	"468.6"	""	"275.6"	""	"270.3"	"350.8"	""	"828"	"72"	"36.000"	"29.000"	"2.43220591947327E-06"	"24"	"0"	"1.728E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLMAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"841.98041"	"1682.95354"	"1682.95515"	"-0.96"	"-0.00081"	"18/98"	"18"	"98"	"7818920.14044189"	"HCD"	"MS2"	"47.51143"	"626.7"	"100.000"	"61.2009"	"19444"	"19444"	"19427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1557.1"	""	"1222.2"	""	"986.2"	""	"698.0"	""	"651.0"	"781.9"	""	"828"	"61"	"36.000"	"29.000"	"3.23593911099568E-05"	"21"	"0"	"2.548E-05"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLMAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"561.65607"	"1682.95365"	"1682.95515"	"-0.89"	"-0.00050"	"10/98"	"10"	"98"	"2170986.68103027"	"HCD"	"MS2"	"16.6376"	"66.8"	"100.000"	"61.7683"	"19675"	"19675"	"19651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.8"	""	"108.9"	""	"95.1"	""	"96.1"	"1.6"	"104.4"	"104.6"	""	"828"	"36"	"36.000"	"29.000"	"0.00954993336130109"	"22"	"0.0002277"	"0.001233"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLMAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"841.98102"	"1682.95476"	"1682.95515"	"-0.23"	"-0.00019"	"10/98"	"10"	"98"	"3859826.84918213"	"HCD"	"MS2"	"1.593204"	"318.3"	"100.000"	"61.3464"	"19450"	"19450"	"19433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"805.8"	""	"631.4"	""	"529.5"	""	"305.6"	"1.4"	"317.3"	"399.4"	""	"807"	"70"	"36.000"	"29.000"	"3.65463104462423E-06"	"23"	"0"	"9.474E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLMAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9531"	"0.0000"	"1"	"1"	"1"	"561.65656"	"1682.95511"	"1682.95515"	"-0.02"	"-0.00001"	"9/98"	"9"	"98"	"41870370.4284668"	"HCD"	"MS2"	"4.080112"	"188.0"	"20.168"	"61.4360"	"19540"	"19540"	"19523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"512.5"	""	"369.3"	""	"308.7"	""	"183.5"	""	"180.0"	"213.4"	""	"807"	"64"	"36.000"	"29.000"	"1.71333994052338E-05"	"20"	"0"	"0.0001203"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLMAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9275"	"0.0000"	"1"	"1"	"1"	"841.98138"	"1682.95549"	"1682.95515"	"0.20"	"0.00017"	"10/98"	"10"	"98"	"8266087.081604"	"HCD"	"MS2"	"52.92608"	"588.6"	"84.140"	"61.0425"	"19325"	"19325"	"19305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1438.6"	""	"1140.0"	""	"926.5"	""	"665.3"	""	"642.1"	"725.7"	""	"811"	"69"	"36.000"	"29.000"	"4.84162176360263E-06"	"22"	"0"	"4.787E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLMAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"561.65668"	"1682.95548"	"1682.95515"	"0.20"	"0.00011"	"9/98"	"9"	"98"	"14784206.0413208"	"HCD"	"MS2"	"25.26429"	"296.5"	"100.000"	"61.0033"	"19309"	"19309"	"19289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"774.0"	""	"628.9"	""	"451.3"	""	"295.5"	""	"294.2"	"341.1"	""	"811"	"63"	"36.000"	"29.000"	"1.90542061039415E-05"	"19"	"0"	"0.0001605"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLMAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"561.65753"	"1682.95804"	"1682.95515"	"1.72"	"0.00096"	"9/98"	"9"	"98"	"28604579.9040527"	"HCD"	"MS2"	"3.755416"	"178.1"	"27.173"	"61.3072"	"19434"	"19434"	"19417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"484.0"	""	"357.2"	""	"294.1"	""	"169.7"	""	"160.8"	"207.6"	""	"811"	"66"	"36.000"	"29.000"	"1.0616732098328E-05"	"21"	"0"	"5.139E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLMAFTNLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"561.65759"	"1682.95823"	"1682.95515"	"1.83"	"0.00103"	"10/98"	"10"	"98"	"1723091.65881348"	"HCD"	"MS2"	"27.65155"	"64.1"	"100.000"	"61.7661"	"19621"	"19621"	"19593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.8"	""	"87.1"	""	"94.8"	""	"102.2"	"0.4"	"98.7"	"109.4"	""	"811"	"13"	"36.000"	"29.000"	"1.94980355796365"	"17"	"0.0002277"	"0.001292"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPQSYLYLVK"	"[R].nPQSYLYLVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"561.66577"	"1682.98276"	"1682.98816"	"-3.21"	"-0.00180"	"9/90"	"9"	"90"	"1735082.28143311"	"HCD"	"MS2"	"30.91415"	"60.9"	"100.000"	"58.6368"	"18402"	"18402"	"18373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.3"	""	"91.3"	""	"90.9"	""	"82.3"	""	"112.2"	"122.9"	""	"663"	"18"	"35.000"	"28.000"	"0.494861346775437"	"21"	"0.0003839"	"0.001756"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPQSYLYLVK"	"[R].nPQSYLYLVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"841.99548"	"1682.98369"	"1682.98816"	"-2.66"	"-0.00224"	"9/90"	"9"	"90"	"844903.076599121"	"HCD"	"MS2"	"0"	"73.7"	"100.000"	"58.5840"	"18380"	"18380"	"18357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.8"	""	"99.0"	""	"112.1"	""	"105.3"	""	"151.6"	"147.1"	""	"656"	"56"	"35.000"	"28.000"	"9.13847743310566E-05"	"22"	"0"	"6.731E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPQSYLYLVK"	"[R].nPQSYLYLVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"841.99664"	"1682.98601"	"1682.98816"	"-1.28"	"-0.00108"	"16/90"	"16"	"90"	"878614.270690918"	"HCD"	"MS2"	"0"	"79.9"	"100.000"	"58.4174"	"18258"	"18258"	"18234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.2"	""	"99.9"	""	"118.7"	""	"119.4"	""	"154.0"	"168.1"	""	"650"	"43"	"35.000"	"28.000"	"0.00161764552618154"	"20"	"0"	"4.277E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPQSYLYLVK"	"[R].nPQSYLYLVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"841.99670"	"1682.98613"	"1682.98816"	"-1.21"	"-0.00102"	"7/90"	"7"	"90"	"4109084.48071289"	"HCD"	"MS2"	"0"	"281.4"	"100.000"	"58.0958"	"18126"	"18126"	"18107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"369.2"	""	"424.0"	""	"397.5"	""	"387.2"	""	"520.6"	"572.3"	""	"649"	"52"	"35.000"	"28.000"	"0.000185444817600021"	"22"	"0"	"6.621E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPQSYLYLVK"	"[R].nPQSYLYLVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"561.66742"	"1682.98771"	"1682.98816"	"-0.27"	"-0.00015"	"7/90"	"7"	"90"	"9291989.92303467"	"HCD"	"MS2"	"9.422843"	"203.3"	"100.000"	"58.1512"	"18149"	"18149"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"256.5"	""	"313.7"	""	"297.3"	""	"292.6"	"0.5"	"372.5"	"393.4"	""	"636"	"40"	"35.000"	"28.000"	"0.00286699621758694"	"24"	"0"	"2.697E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPQSYLYLVK"	"[R].nPQSYLYLVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"561.66748"	"1682.98789"	"1682.98816"	"-0.16"	"-0.00009"	"6/90"	"6"	"90"	"8913053.98138428"	"HCD"	"MS2"	"4.816942"	"203.6"	"100.000"	"58.3064"	"18266"	"18266"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"262.7"	""	"299.9"	""	"306.2"	""	"293.6"	"3.0"	"385.4"	"379.3"	""	"636"	"28"	"35.000"	"28.000"	"0.0546294867116113"	"17"	"0.0001859"	"0.0003446"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPQSYLYLVK"	"[R].nPQSYLYLVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"841.99823"	"1682.98918"	"1682.98816"	"0.61"	"0.00051"	"9/90"	"9"	"90"	"4391862.4710083"	"HCD"	"MS2"	"0"	"287.5"	"100.000"	"58.2624"	"18248"	"18248"	"18229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.5"	""	"452.0"	""	"423.2"	""	"380.0"	"1.3"	"518.1"	"577.3"	""	"623"	"57"	"34.000"	"27.000"	"5.77375100693714E-05"	"21"	"0"	"5.299E-05"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLGLPVFNTVK"	"[K].hLGLPVFNTVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"3"	"3"	"0.9796"	"0.0000"	"1"	"1"	"1"	"561.68268"	"1683.03348"	"1683.03578"	"-1.37"	"-0.00077"	"14/86"	"14"	"86"	"23438182.2779541"	"HCD"	"MS2"	"22.61979"	"196.8"	"34.045"	"48.7972"	"14355"	"14355"	"14335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.4"	""	"279.5"	""	"267.9"	""	"350.1"	"0.7"	"338.4"	"357.4"	""	"297"	"49"	"31.000"	"24.000"	"0.000177715968899126"	"16"	"0"	"0.000112"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLGLPVFNTVK"	"[K].hLGLPVFNTVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"561.68292"	"1683.03421"	"1683.03578"	"-0.93"	"-0.00052"	"13/86"	"13"	"86"	"21881195.0917969"	"HCD"	"MS2"	"22.74195"	"320.5"	"60.504"	"49.0723"	"14515"	"14515"	"14495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"468.2"	""	"447.5"	""	"447.4"	""	"535.6"	"10.2"	"542.7"	"582.1"	""	"279"	"57"	"31.000"	"24.000"	"2.72630354080667E-05"	"19"	"0"	"8.084E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAGSATLSMAYAGAR"	"[K].aGAGSATLSMAYAGAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"842.43713"	"1683.86699"	"1683.86857"	"-0.94"	"-0.00079"	"14/128"	"14"	"128"	"1221661.45819092"	"HCD"	"MS2"	"0"	"69.4"	"100.000"	"38.5838"	"10240"	"10240"	"10209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.9"	""	"96.3"	""	"129.9"	""	"64.9"	""	"103.8"	"136.1"	""	"891"	"98"	"36.000"	"29.000"	"6.4098476661298E-09"	"26"	"0"	"1.083E-08"	"1.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAGSATLSMAYAGAR"	"[K].aGAGSATLSMAYAGAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"842.43787"	"1683.86846"	"1683.86857"	"-0.07"	"-0.00006"	"14/128"	"14"	"128"	"838389.024719238"	"HCD"	"MS2"	"0"	"54.0"	"100.000"	"38.5390"	"10178"	"10178"	"10151"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.4"	""	"78.7"	""	"84.1"	""	"49.0"	"1.9"	"85.8"	"111.1"	""	"887"	"104"	"36.000"	"29.000"	"1.57722489785345E-09"	"27"	"0"	"1.056E-07"	"1.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSWVTEMK"	"[R].dLTSWVTEmk.[A]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7612"	"0.0000"	"1"	"1"	"1"	"842.45459"	"1683.90190"	"1683.90278"	"-0.52"	"-0.00044"	"18/86"	"18"	"86"	"644234.578918457"	"HCD"	"MS2"	"0"	"55.0"	"100.000"	"55.8013"	"17189"	"17189"	"17163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.7"	""	"69.1"	""	"72.9"	""	"82.3"	"0.4"	"100.6"	"122.1"	""	"975"	"67"	"36.000"	"29.000"	"9.97641760403279E-06"	""	"0.0001889"	"0.001078"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSWVTEMK"	"[R].dLTSWVTEmk.[A]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"561.97235"	"1683.90250"	"1683.90278"	"-0.17"	"-0.00009"	"8/86"	"8"	"86"	"3160478.94012451"	"HCD"	"MS2"	"38.44722"	"112.3"	"100.000"	"55.8059"	"17191"	"17191"	"17163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.8"	""	"116.0"	""	"127.8"	""	"225.6"	"1.4"	"246.6"	"228.7"	""	"953"	"21"	"36.000"	"29.000"	"0.368182298798102"	"21"	"0.0009404"	"0.009898"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSWVTEMK"	"[R].dLTSWVTEmk.[A]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"561.97241"	"1683.90268"	"1683.90278"	"-0.06"	"-0.00003"	"8/86"	"8"	"86"	"3273760.55596924"	"HCD"	"MS2"	"26.94413"	"119.2"	"100.000"	"55.9684"	"17311"	"17311"	"17285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.8"	""	"135.0"	""	"146.2"	""	"200.9"	""	"258.3"	"252.4"	""	"953"	"22"	"36.000"	"29.000"	"0.269192468498062"	"20"	"0.0004166"	"0.002441"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTSWVTEMK"	"[R].dLTSWVTEmk.[A]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"842.45563"	"1683.90398"	"1683.90278"	"0.71"	"0.00060"	"9/86"	"9"	"86"	"631440.820495605"	"HCD"	"MS2"	"0"	"52.7"	"100.000"	"55.9752"	"17314"	"17314"	"17285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.4"	""	"67.2"	""	"60.5"	""	"93.8"	""	"99.8"	"118.2"	""	"937"	"61"	"36.000"	"29.000"	"3.79061428765072E-05"	"21"	"0.0001889"	"0.0005386"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFFWMQEPK"	"[R].lFFWMQEPk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"0"	"3"	"3"	"0.4800"	"0.0000"	"1"	"1"	"1"	"561.97931"	"1683.92337"	"1683.93329"	"-5.89"	"-0.00331"	"6/70"	"6"	"70"	"474036.127258301"	"HCD"	"MS2"	"51.48181"	"14.5"	"100.000"	"79.3067"	"26814"	"26814"	"26783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.0"	""	"18.2"	""	"25.3"	""	"23.4"	""	"27.8"	"23.3"	""	"981"	"25"	"36.000"	"29.000"	"0.173635695801425"	"27"	"0.0003839"	"0.001995"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLIPYIEHWPR"	"[R].mLIPYIEHWPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FT1"	"Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq9 PE=1 SV=2"	"Q68FT1"	"Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq9 PE=1 SV=2"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"561.97955"	"1683.92411"	"1683.92423"	"-0.08"	"-0.00004"	"12/80"	"12"	"80"	"2112253.80657959"	"HCD"	"MS2"	"10.54761"	"48.1"	"100.000"	"63.4688"	"20370"	"20370"	"20339"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.6"	""	"79.8"	""	"72.3"	""	"72.0"	"0.2"	"74.9"	"89.5"	""	"958"	"30"	"36.000"	"29.000"	"0.0502730823324463"	"21"	"0"	"7.786E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLIPYIEHWPR"	"[R].mLIPYIEHWPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FT1"	"Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq9 PE=1 SV=2"	"Q68FT1"	"Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq9 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"561.98035"	"1683.92649"	"1683.92423"	"1.34"	"0.00075"	"11/80"	"11"	"80"	"2102745.10772705"	"HCD"	"MS2"	"6.551381"	"44.9"	"100.000"	"63.4567"	"20312"	"20312"	"20281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.4"	""	"72.6"	""	"62.4"	""	"68.6"	""	"79.1"	"76.1"	""	"962"	"25"	"36.000"	"29.000"	"0.166396840734365"	"16"	"0"	"0.0001636"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"561.98108"	"1683.92868"	"1683.95910"	"-18.06"	"-0.01014"	"13/142"	"13"	"142"	"598700.197265625"	"HCD"	"MS2"	"21.78168"	"17.9"	"100.000"	"79.3007"	"26760"	"26760"	"26737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.1"	""	"21.5"	""	"26.1"	""	"25.0"	""	"31.9"	"43.3"	""	"937"	"22"	"36.000"	"29.000"	"0.288874758372104"	"25"	"0"	"0.0001596"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8514"	"0.0000"	"1"	"1"	"1"	"842.48187"	"1683.95647"	"1683.95910"	"-1.56"	"-0.00132"	"13/142"	"13"	"142"	"774343.977294922"	"HCD"	"MS2"	"28.79499"	"36.8"	"100.000"	"78.5156"	"26491"	"26491"	"26463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.2"	""	"42.6"	""	"38.8"	""	"68.7"	"0.7"	"84.4"	"71.0"	""	"795"	"74"	"35.000"	"29.000"	"1.75120558243855E-06"	"28"	"0"	"5.237E-07"	"1.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9114"	"0.0000"	"1"	"1"	"1"	"561.99097"	"1683.95835"	"1683.95910"	"-0.45"	"-0.00025"	"10/142"	"10"	"142"	"7800370.40783691"	"HCD"	"MS2"	"2.098377"	"25.3"	"98.593"	"78.8408"	"26624"	"26624"	"26607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.6"	""	"23.8"	""	"29.0"	""	"48.3"	"1.0"	"47.8"	"55.1"	""	"804"	"79"	"36.000"	"29.000"	"4.63688209644079E-07"	"24"	"0"	"1.149E-06"	"1.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"561.99097"	"1683.95835"	"1683.95910"	"-0.45"	"-0.00025"	"15/142"	"15"	"142"	"10310741.7818604"	"HCD"	"MS2"	"2.058287"	"27.7"	"86.744"	"78.8576"	"26579"	"26579"	"26561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.8"	""	"27.6"	""	"33.7"	""	"57.2"	""	"55.7"	"55.6"	""	"804"	"82"	"36.000"	"29.000"	"2.43908004494579E-07"	"26"	"0"	"1.938E-06"	"1.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"561.99103"	"1683.95853"	"1683.95910"	"-0.34"	"-0.00019"	"13/142"	"13"	"142"	"3858649.71386719"	"HCD"	"MS2"	"31.25768"	"20.1"	"100.000"	"78.5479"	"26504"	"26504"	"26479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"22.2"	""	"27.5"	""	"34.4"	""	"41.8"	"44.5"	""	"800"	"70"	"36.000"	"29.000"	"3.98162166940611E-06"	"25"	"0"	"3.929E-06"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8901"	"0.0000"	"1"	"1"	"1"	"842.48297"	"1683.95867"	"1683.95910"	"-0.26"	"-0.00022"	"13/142"	"13"	"142"	"4662768.95916748"	"HCD"	"MS2"	"1.416499"	"167.3"	"100.000"	"78.8532"	"26578"	"26578"	"26561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"201.2"	""	"152.2"	""	"181.2"	""	"328.1"	"1.2"	"354.3"	"372.0"	""	"800"	"91"	"36.000"	"29.000"	"3.42815138092148E-08"	"28"	"0"	"3.332E-07"	"1.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9811"	"0.0000"	"1"	"1"	"1"	"561.99115"	"1683.95890"	"1683.95910"	"-0.12"	"-0.00007"	"15/142"	"15"	"142"	"2218620.4630127"	"HCD"	"MS2"	"27.63702"	"17.5"	"100.000"	"78.5625"	"26459"	"26459"	"26433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.6"	""	"18.5"	""	"20.8"	""	"34.4"	""	"33.8"	"34.9"	""	"787"	"53"	"35.000"	"28.000"	"0.000198584220591249"	"17"	"0"	"9.882E-06"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9296"	"0.0000"	"1"	"1"	"1"	"842.48322"	"1683.95915"	"1683.95910"	"0.03"	"0.00003"	"13/142"	"13"	"142"	"955188.988098145"	"HCD"	"MS2"	"0"	"45.7"	"100.000"	"78.5693"	"26462"	"26462"	"26433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.7"	""	"48.9"	""	"49.8"	""	"85.9"	""	"94.1"	"96.0"	""	"790"	"71"	"35.000"	"28.000"	"3.33117229316889E-06"	"22"	"0"	"4.528E-07"	"1.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8804"	"0.0000"	"1"	"1"	"1"	"842.48322"	"1683.95915"	"1683.95910"	"0.03"	"0.00003"	"13/142"	"13"	"142"	"4490005.57928467"	"HCD"	"MS2"	"0.6511507"	"161.4"	"100.000"	"78.8017"	"26608"	"26608"	"26591"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.8"	""	"166.3"	""	"168.2"	""	"312.0"	""	"339.5"	"344.1"	""	"790"	"92"	"35.000"	"28.000"	"2.5680122768552E-08"	""	"0"	"2.829E-07"	"1.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"561.99237"	"1683.96256"	"1683.95910"	"2.05"	"0.00115"	"12/142"	"12"	"142"	"870565.677062988"	"HCD"	"MS2"	"31.52021"	"20.4"	"100.000"	"79.1775"	"26761"	"26761"	"26735"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.7"	""	"27.6"	""	"34.6"	""	"36.1"	""	"36.1"	"33.7"	""	"770"	"32"	"35.000"	"28.000"	"0.0268819475569711"	"25"	"0"	"2.304E-05"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQLAAQLADLAAR"	"[R].vDQLAAQLADLAAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"561.99274"	"1683.96366"	"1683.95910"	"2.71"	"0.00152"	"17/142"	"17"	"142"	"882284.774291992"	"HCD"	"MS2"	"28.38393"	"19.5"	"100.000"	"79.1921"	"26716"	"26716"	"26689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.3"	""	"27.7"	""	"29.3"	""	"25.9"	""	"39.4"	"37.4"	""	"768"	"34"	"35.000"	"28.000"	"0.0168008488380769"	"23"	"0"	"1.219E-05"	"1.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFQINTFNLK"	"[R].tFQINTFNLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"561.99829"	"1683.98032"	"1683.98341"	"-1.84"	"-0.00103"	"8/96"	"8"	"96"	"4293708.20526123"	"HCD"	"MS2"	"49.32853"	"132.4"	"100.000"	"60.5141"	"19110"	"19110"	"19081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.6"	"3.3"	"205.7"	""	"227.1"	""	"192.8"	"4.5"	"202.0"	"220.6"	""	"635"	"50"	"35.000"	"28.000"	"0.000322658959986446"	"25"	"0.0001308"	"0.0002192"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFQINTFNLK"	"[R].tFQINTFNLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"842.49475"	"1683.98223"	"1683.98341"	"-0.71"	"-0.00059"	"18/96"	"18"	"96"	"1669591.84442139"	"HCD"	"MS2"	"25.67356"	"143.3"	"100.000"	"60.7194"	"19247"	"19247"	"19219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.0"	""	"233.8"	""	"237.3"	""	"202.0"	"2.4"	"212.3"	"243.1"	""	"620"	"61"	"34.000"	"27.000"	"2.28750311340021E-05"	"24"	"0"	"2.869E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFQINTFNLK"	"[R].tFQINTFNLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"0"	"3"	"3"	"0.9074"	"0.0000"	"1"	"1"	"1"	"561.99963"	"1683.98435"	"1683.98341"	"0.56"	"0.00031"	"8/96"	"8"	"96"	"4940471.67352295"	"HCD"	"MS2"	"31.12144"	"146.6"	"100.000"	"60.6823"	"19232"	"19232"	"19203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.3"	""	"233.4"	""	"244.7"	""	"225.1"	"3.5"	"219.8"	"247.8"	""	"583"	"54"	"34.000"	"27.000"	"0.000110825209027444"	"21"	"0.0001308"	"0.000239"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGIQFYTQLK"	"[K].qGIQFYTQLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"842.49585"	"1683.98442"	"1683.98341"	"0.60"	"0.00050"	"9/90"	"9"	"90"	"776951.28125"	"HCD"	"MS2"	"0"	"82.9"	"100.000"	"51.4654"	"15437"	"15437"	"15410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.2"	""	"116.3"	""	"115.1"	""	"135.0"	""	"137.0"	"156.6"	""	"583"	"59"	"34.000"	"27.000"	"3.40909072482292E-05"	"22"	"0"	"3.396E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFQINTFNLK"	"[R].tFQINTFNLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"P17046"	"Lysosome-associated membrane glycoprotein 2 OS=Rattus norvegicus OX=10116 GN=Lamp2 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"842.49591"	"1683.98454"	"1683.98341"	"0.67"	"0.00057"	"9/96"	"9"	"96"	"2269741.14050293"	"HCD"	"MS2"	"31.07057"	"200.0"	"100.000"	"60.5396"	"19120"	"19120"	"19097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.4"	""	"313.2"	""	"340.1"	""	"297.7"	""	"303.7"	"326.5"	""	"583"	"56"	"34.000"	"27.000"	"7.7381752131587E-05"	"23"	"0"	"6.201E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPFLLSGTSYK"	"[R].iPFLLSGTSYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"842.50690"	"1684.00652"	"1684.00856"	"-1.22"	"-0.00102"	"9/86"	"9"	"86"	"1408218.07440186"	"HCD"	"MS2"	"15.37455"	"85.6"	"100.000"	"70.2727"	"23138"	"23138"	"23114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"129.8"	""	"120.1"	""	"124.7"	""	"137.3"	"2.7"	"141.0"	"154.2"	""	"466"	"53"	"33.000"	"26.000"	"0.000122562023069034"	"21"	"0"	"0.0001782"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPFLLSGTSYK"	"[R].iPFLLSGTSYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"842.50702"	"1684.00676"	"1684.00856"	"-1.07"	"-0.00090"	"10/86"	"10"	"86"	"352182.504882813"	"HCD"	"MS2"	"0"	"30.3"	"100.000"	"70.6964"	"23259"	"23259"	"23235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.4"	""	"38.8"	""	"43.5"	""	"44.2"	""	"55.2"	"65.9"	""	"461"	"55"	"33.000"	"26.000"	"7.6678027034268E-05"	"22"	"0.0001889"	"0.0004504"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPFLLSGTSYK"	"[R].iPFLLSGTSYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.8475"	"0.0000"	"1"	"1"	"1"	"562.00726"	"1684.00724"	"1684.00856"	"-0.79"	"-0.00044"	"12/86"	"12"	"86"	"4074385.99993896"	"HCD"	"MS2"	"11.06767"	"99.5"	"100.000"	"70.3097"	"23153"	"23153"	"23130"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.7"	""	"131.4"	""	"150.5"	""	"165.2"	"1.0"	"164.7"	"176.1"	""	"466"	"59"	"33.000"	"26.000"	"2.68754609072314E-05"	"26"	"0"	"6.099E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPFLLSGTSYK"	"[R].iPFLLSGTSYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"562.00732"	"1684.00742"	"1684.00856"	"-0.68"	"-0.00038"	"11/86"	"11"	"86"	"2947359.0838623"	"HCD"	"MS2"	"1.112301"	"83.1"	"100.000"	"70.3827"	"23131"	"23131"	"23107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.8"	""	"117.3"	""	"134.3"	""	"140.2"	""	"133.0"	"139.7"	""	"478"	"38"	"33.000"	"26.000"	"0.00351073380356884"	"20"	"0"	"8.134E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPFLLSGTSYK"	"[R].iPFLLSGTSYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"842.50757"	"1684.00786"	"1684.00856"	"-0.42"	"-0.00035"	"10/86"	"10"	"86"	"1484059.98071289"	"HCD"	"MS2"	"0"	"87.2"	"100.000"	"70.3737"	"23127"	"23127"	"23107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.7"	""	"124.3"	""	"113.8"	""	"162.1"	""	"157.5"	"143.5"	""	"475"	"49"	"33.000"	"26.000"	"0.000308790274782907"	"22"	"0"	"0.0001019"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPFLLSGTSYK"	"[R].iPFLLSGTSYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"842.50842"	"1684.00957"	"1684.00856"	"0.60"	"0.00050"	"9/86"	"9"	"86"	"502378.415039063"	"HCD"	"MS2"	"5.757713"	"34.7"	"100.000"	"70.5797"	"23263"	"23263"	"23242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.8"	""	"45.8"	""	"51.7"	""	"59.0"	"0.1"	"66.5"	"62.5"	""	"450"	"42"	"33.000"	"26.000"	"0.00130071610666286"	"23"	"0.0001889"	"0.0008235"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPFLLSGTSYK"	"[R].iPFLLSGTSYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"562.00806"	"1684.00962"	"1684.00856"	"0.62"	"0.00035"	"9/86"	"9"	"86"	"885292.363220215"	"HCD"	"MS2"	"10.84029"	"38.1"	"100.000"	"70.6303"	"23284"	"23284"	"23258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.0"	""	"49.9"	""	"59.6"	""	"66.4"	""	"66.7"	"64.0"	""	"452"	"38"	"33.000"	"26.000"	"0.00320706999901735"	"25"	"0"	"0.0001671"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dmGLTAFTNLk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"842.96613"	"1684.92497"	"1684.93441"	"-5.60"	"-0.00472"	"17/98"	"17"	"98"	"581008.652954102"	"HCD"	"MS2"	"0"	"53.0"	"100.000"	"53.7890"	"16424"	"16424"	"16409"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.8"	""	"85.7"	""	"63.2"	""	"107.2"	""	"83.2"	"76.2"	""	"962"	"38"	"36.000"	"29.000"	"0.00820625629110503"	"24"	"0.0007076"	"0.006988"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dmGLTAFTNLk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"842.96893"	"1684.93059"	"1684.93441"	"-2.27"	"-0.00191"	"9/98"	"9"	"98"	"688714.795471191"	"HCD"	"MS2"	"0"	"59.8"	"100.000"	"53.4844"	"16307"	"16307"	"16288"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.9"	""	"101.3"	""	"84.8"	""	"120.3"	""	"73.9"	"81.5"	""	"962"	"68"	"36.000"	"29.000"	"7.65852397711612E-06"	"27"	"0.0001889"	"0.0005321"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dmGLTAFTNLk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"842.96918"	"1684.93108"	"1684.93441"	"-1.98"	"-0.00167"	"17/98"	"17"	"98"	"908031.344543457"	"HCD"	"MS2"	"0"	"82.0"	"100.000"	"53.4569"	"16239"	"16239"	"16229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.6"	""	"140.5"	""	"105.5"	""	"182.9"	"1.3"	"100.6"	"105.0"	""	"965"	"59"	"36.000"	"29.000"	"5.56541196898677E-05"	"23"	"0"	"7.295E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITQSALDYMK"	"[K].gITQSALDYMk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"842.96948"	"1684.93169"	"1684.93441"	"-1.62"	"-0.00136"	"12/104"	"12"	"104"	"356487.416381836"	"HCD"	"MS2"	"0"	"39.0"	"100.000"	"51.0025"	"15248"	"15248"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.6"	""	"48.8"	""	"56.1"	""	"57.7"	""	"76.9"	"80.2"	""	"941"	"31"	"36.000"	"29.000"	"0.0336945474505171"	"17"	"0.0001889"	"0.0005504"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dmGLTAFTNLk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.31622"	"1684.93412"	"1684.93441"	"-0.18"	"-0.00010"	"11/98"	"11"	"98"	"4605746.38024902"	"HCD"	"MS2"	"0"	"153.7"	"100.000"	"53.6380"	"16366"	"16366"	"16355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.1"	""	"223.0"	""	"208.4"	""	"278.4"	""	"242.5"	"253.9"	""	"950"	"28"	"36.000"	"29.000"	"0.0806665734919328"	"14"	"0.0001308"	"0.0002661"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSFTGSVPTGMK"	"[K].vSFTGSVPTGmk.[I]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"842.97076"	"1684.93425"	"1684.93441"	"-0.10"	"-0.00008"	"16/102"	"16"	"102"	"1736733.22247314"	"HCD"	"MS2"	"0"	"102.2"	"100.000"	"40.6874"	"11056"	"11056"	"11029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.5"	""	"138.6"	""	"134.6"	""	"248.7"	""	"160.3"	"159.5"	""	"951"	"52"	"36.000"	"29.000"	"0.000269867459871764"	""	"0"	"0.0001508"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSFTGSVPTGMK"	"[K].vSFTGSVPTGmk.[I]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"842.97107"	"1684.93486"	"1684.93441"	"0.27"	"0.00022"	"9/102"	"9"	"102"	"1802173.0692749"	"HCD"	"MS2"	"0"	"110.6"	"100.000"	"40.8802"	"11179"	"11179"	"11149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.6"	""	"139.0"	""	"155.3"	""	"249.9"	""	"186.5"	"180.9"	""	"959"	"55"	"36.000"	"29.000"	"0.000139890625321356"	"26"	"0.0003839"	"0.001676"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEVFFSEK"	"[K].lLDEVFFSEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"562.32300"	"1684.95444"	"1684.95620"	"-1.04"	"-0.00058"	"10/84"	"10"	"84"	"2401394.32757568"	"HCD"	"MS2"	"3.817766"	"70.1"	"100.000"	"75.2629"	"25175"	"25175"	"25151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.4"	""	"96.3"	""	"101.0"	""	"115.0"	""	"122.5"	"131.3"	""	"851"	"38"	"36.000"	"29.000"	"0.00645504931353948"	"21"	"0.0003839"	"0.001635"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEVFFSEK"	"[K].lLDEVFFSEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"562.32300"	"1684.95444"	"1684.95620"	"-1.04"	"-0.00058"	"10/84"	"10"	"84"	"2695288.55529785"	"HCD"	"MS2"	"28.16743"	"78.2"	"100.000"	"75.5649"	"25298"	"25298"	"25279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.5"	""	"102.5"	""	"103.3"	""	"121.8"	"0.2"	"145.1"	"147.9"	""	"851"	"31"	"36.000"	"29.000"	"0.0334117762526586"	"23"	"0.0001889"	"0.0009025"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEVFFSEK"	"[K].lLDEVFFSEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"842.98114"	"1684.95500"	"1684.95620"	"-0.71"	"-0.00060"	"13/84"	"13"	"84"	"495957.314147949"	"HCD"	"MS2"	"3.996507"	"49.4"	"100.000"	"75.6112"	"25317"	"25317"	"25295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.4"	""	"68.7"	""	"68.2"	""	"83.0"	"0.3"	"86.8"	"93.7"	""	"855"	"37"	"36.000"	"29.000"	"0.00864840698884962"	"18"	"0.0001308"	"0.0002638"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEVFFSEK"	"[K].lLDEVFFSEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"562.32336"	"1684.95554"	"1684.95620"	"-0.39"	"-0.00022"	"11/84"	"11"	"84"	"3072432.03210449"	"HCD"	"MS2"	"15.76157"	"83.7"	"100.000"	"75.2864"	"25133"	"25133"	"25105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.0"	""	"124.2"	""	"115.9"	""	"140.4"	""	"151.7"	"147.4"	""	"852"	"38"	"36.000"	"29.000"	"0.00716819150016019"	"17"	"0.0001889"	"0.0008917"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEVFFSEK"	"[K].lLDEVFFSEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"842.98151"	"1684.95574"	"1684.95620"	"-0.27"	"-0.00023"	"18/84"	"18"	"84"	"1328687.5345459"	"HCD"	"MS2"	"12.02581"	"118.9"	"100.000"	"75.2887"	"25134"	"25134"	"25105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.7"	""	"155.8"	""	"165.5"	""	"192.4"	""	"211.1"	"231.7"	""	"826"	"61"	"36.000"	"29.000"	"3.68086637449237E-05"	"22"	"0"	"9.939E-06"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEVFFSEK"	"[K].lLDEVFFSEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"842.98163"	"1684.95598"	"1684.95620"	"-0.13"	"-0.00011"	"18/84"	"18"	"84"	"1691954.91485596"	"HCD"	"MS2"	"6.628245"	"142.7"	"100.000"	"75.2999"	"25190"	"25190"	"25167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"210.9"	""	"175.4"	""	"198.6"	""	"230.7"	"0.8"	"265.1"	"270.3"	""	"826"	"61"	"36.000"	"29.000"	"3.59707962651861E-05"	"22"	"0"	"1.214E-05"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEVFFSEK"	"[K].lLDEVFFSEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"842.98181"	"1684.95635"	"1684.95620"	"0.09"	"0.00008"	"9/84"	"9"	"84"	"1066933.24859619"	"HCD"	"MS2"	"7.215521"	"95.2"	"100.000"	"75.5771"	"25251"	"25251"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.7"	""	"103.6"	""	"140.5"	""	"144.8"	"2.0"	"192.6"	"187.0"	""	"833"	"61"	"36.000"	"29.000"	"3.4089058425814E-05"	"24"	"0"	"8.313E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEVFFSEK"	"[K].lLDEVFFSEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"562.32373"	"1684.95664"	"1684.95620"	"0.26"	"0.00015"	"10/84"	"10"	"84"	"2866797.19787598"	"HCD"	"MS2"	"31.16397"	"85.7"	"100.000"	"75.5794"	"25252"	"25252"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.3"	""	"117.7"	""	"121.4"	""	"144.4"	""	"150.5"	"159.1"	""	"814"	"29"	"36.000"	"29.000"	"0.0503030605411915"	"16"	"0.0001889"	"0.0008251"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.9000"	"0.0000"	"1"	"1"	"1"	"421.99719"	"1684.96694"	"1684.96960"	"-1.58"	"-0.00067"	"10/118"	"10"	"118"	"22288475.0004883"	"HCD"	"MS2"	"2.705859"	"88.1"	"36.508"	"37.1615"	"9612"	"9612"	"9594"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.1"	"6.4"	"136.2"	""	"130.7"	""	"137.8"	"1.9"	"146.0"	"144.2"	""	"772"	"30"	"35.000"	"28.000"	"0.0428141478691287"	"17"	"0"	"0.0001205"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.9091"	"0.0000"	"1"	"1"	"1"	"421.99719"	"1684.96694"	"1684.96960"	"-1.58"	"-0.00067"	"8/118"	"8"	"118"	"19819325.6331787"	"HCD"	"MS2"	"9.688606"	"102.2"	"45.632"	"37.2800"	"9704"	"9704"	"9686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.3"	""	"159.1"	""	"143.5"	""	"147.2"	""	"178.4"	"178.9"	""	"772"	"33"	"35.000"	"28.000"	"0.0215569495168417"	"18"	"0"	"7.943E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"421.99744"	"1684.96792"	"1684.96960"	"-1.00"	"-0.00042"	"8/118"	"8"	"118"	"16642465.776062"	"HCD"	"MS2"	"14.91989"	"198.2"	"97.172"	"37.9215"	"9968"	"9968"	"9937"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"172.6"	""	"186.5"	""	"194.3"	""	"416.6"	"1.1"	"467.8"	"448.6"	""	"761"	"6"	"35.000"	"28.000"	"8.81768664313005"	"13"	"0.001783"	"0.02479"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.9444"	"0.0000"	"1"	"1"	"1"	"421.99753"	"1684.96828"	"1684.96960"	"-0.78"	"-0.00033"	"9/118"	"9"	"118"	"90136270.5462646"	"HCD"	"MS2"	"14.98311"	"335.3"	"46.250"	"36.9772"	"9580"	"9580"	"9558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"522.9"	"26.4"	"542.8"	""	"454.1"	""	"474.2"	""	"590.6"	"565.6"	""	"755"	"36"	"35.000"	"28.000"	"0.0089725720820089"	"17"	"0"	"0.0001088"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"842.98779"	"1684.96831"	"1684.96960"	"-0.77"	"-0.00065"	"12/118"	"12"	"118"	"1792226.84899902"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"36.9183"	"9513"	"9513"	"9482"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.4"	""	"57.2"	""	"36.9"	""	"43.8"	""	"54.2"	"48.3"	""	"755"	"37"	"35.000"	"28.000"	"0.00837369148474583"	"18"	"0"	"0.0001367"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.32764"	"1684.96836"	"1684.96960"	"-0.74"	"-0.00042"	"11/118"	"11"	"118"	"54698421.5076904"	"HCD"	"MS2"	"29.5549"	"311.0"	"38.586"	"36.9704"	"9577"	"9577"	"9558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"445.5"	""	"471.8"	""	"449.6"	""	"472.9"	""	"566.7"	"542.6"	""	"755"	"40"	"35.000"	"28.000"	"0.00402640035764422"	"15"	"0"	"4.255E-06"	"1.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.9333"	"0.0000"	"1"	"1"	"1"	"421.99756"	"1684.96840"	"1684.96960"	"-0.71"	"-0.00030"	"10/118"	"10"	"118"	"15620317.4258423"	"HCD"	"MS2"	"6.919515"	"211.3"	"100.000"	"37.8609"	"9899"	"9899"	"9879"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.8"	""	"220.6"	""	"237.6"	""	"418.5"	"3.5"	"473.9"	"457.7"	""	"755"	"15"	"35.000"	"28.000"	"1.22438205549379"	"14"	"0.00103"	"0.01278"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.8788"	"0.0000"	"1"	"1"	"1"	"421.99768"	"1684.96889"	"1684.96960"	"-0.42"	"-0.00018"	"11/118"	"11"	"118"	"62885524.4624023"	"HCD"	"MS2"	"24.36304"	"518.8"	"100.000"	"36.8702"	"9493"	"9493"	"9466"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"824.8"	"41.0"	"822.8"	""	"731.0"	""	"762.4"	"9.5"	"850.1"	"866.9"	""	"755"	"33"	"35.000"	"28.000"	"0.0180267300805778"	"18"	"0"	"0.0001151"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"562.32794"	"1684.96927"	"1684.96960"	"-0.20"	"-0.00011"	"11/118"	"11"	"118"	"90946071.543457"	"HCD"	"MS2"	"9.144955"	"301.1"	"25.171"	"36.8841"	"9499"	"9499"	"9482"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"467.4"	""	"474.9"	""	"439.9"	""	"438.7"	"1.2"	"518.9"	"508.2"	""	"752"	"47"	"35.000"	"28.000"	"0.0006826338892027"	"17"	"0"	"5.263E-06"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.32800"	"1684.96946"	"1684.96960"	"-0.09"	"-0.00005"	"6/118"	"6"	"118"	"7951818.79144287"	"HCD"	"MS2"	"12.19217"	"239.6"	"61.440"	"37.4059"	"9756"	"9756"	"9729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.8"	""	"332.7"	""	"337.4"	""	"357.5"	"5.8"	"475.1"	"457.9"	""	"753"	"35"	"35.000"	"28.000"	"0.0113439676810607"	"15"	"0"	"0.0001123"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].rHPDYSVSLLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"842.98865"	"1684.97002"	"1684.96960"	"0.25"	"0.00021"	"16/118"	"16"	"118"	"2146192.58355713"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"37.0278"	"9601"	"9601"	"9574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.9"	""	"64.9"	""	"61.0"	""	"56.9"	""	"65.7"	"71.6"	""	"749"	"23"	"35.000"	"28.000"	"0.210596826283786"	"14"	"0.0004166"	"0.002452"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTLQEHLASK"	"[K].tVTLQEHLASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"3"	"3"	"0.5238"	"0.0000"	"1"	"1"	"1"	"562.33643"	"1684.99472"	"1684.99979"	"-3.01"	"-0.00169"	"12/110"	"12"	"110"	"5797595.26647949"	"HCD"	"MS2"	"37.19673"	"272.5"	"100.000"	"34.5334"	"8577"	"8577"	"8554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"379.6"	""	"346.4"	""	"397.4"	""	"439.7"	"0.2"	"511.7"	"506.7"	""	"656"	"42"	"35.000"	"28.000"	"0.00195377183077516"	""	"0"	"5.651E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWKPTLVILR"	"[R].tWkPTLVILR.[I]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.36664"	"1685.08536"	"1685.08782"	"-1.46"	"-0.00082"	"5/94"	"5"	"94"	"4141399.32318115"	"HCD"	"MS2"	"21.80464"	"193.3"	"100.000"	"53.7912"	"16369"	"16369"	"16356"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.3"	""	"271.0"	""	"280.5"	""	"305.1"	"1.2"	"341.4"	"345.6"	""	"153"	"4"	"28.000"	"21.000"	"2.97619535920625"	"13"	"0.0001889"	"0.0009977"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWKPTLVILR"	"[R].tWkPTLVILR.[I]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.36676"	"1685.08573"	"1685.08782"	"-1.24"	"-0.00070"	"4/94"	"4"	"94"	"2970421.87811279"	"HCD"	"MS2"	"12.54617"	"141.2"	"100.000"	"54.0296"	"16519"	"16519"	"16507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.8"	""	"197.9"	""	"204.8"	""	"222.2"	"0.8"	"249.4"	"269.2"	""	"153"	"4"	"28.000"	"21.000"	"3.3163582196646"	"13"	"0.0001889"	"0.0008667"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLPLVKPYLR"	"[K].qLPLVkPYLR.[S]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.36749"	"1685.08792"	"1685.08782"	"0.06"	"0.00004"	"4/92"	"4"	"92"	"13809845.1390991"	"HCD"	"MS2"	"16.7556"	"564.4"	"100.000"	"46.9277"	"13638"	"13638"	"13618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"915.1"	""	"777.3"	""	"781.3"	""	"976.8"	"2.1"	"904.3"	"980.4"	""	"147"	"16"	"28.000"	"21.000"	"0.189359605039689"	"13"	"0"	"0.000134"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLPLVKPYLR"	"[K].qLPLVkPYLR.[S]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.36786"	"1685.08902"	"1685.08782"	"0.72"	"0.00040"	"4/92"	"4"	"92"	"12144078.1810913"	"HCD"	"MS2"	"11.83127"	"529.3"	"100.000"	"46.6683"	"13484"	"13484"	"13464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"841.3"	""	"757.1"	""	"705.4"	""	"889.4"	"8.2"	"863.0"	"943.2"	""	"145"	"16"	"28.000"	"21.000"	"0.198306982657237"	"13"	"0.0001859"	"0.0003418"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSDFWDSLEK"	"[K].tSDFWDSLEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"843.44159"	"1685.87590"	"1685.87867"	"-1.64"	"-0.00139"	"13/88"	"13"	"88"	"728764.685180664"	"HCD"	"MS2"	"33.41391"	"84.0"	"100.000"	"61.0785"	"19394"	"19394"	"19363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.8"	""	"105.3"	""	"116.3"	""	"133.8"	""	"152.8"	"148.7"	""	"891"	"32"	"36.000"	"29.000"	"0.0299811100374664"	"20"	"0.0001308"	"0.0002245"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYMASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"843.46985"	"1685.93242"	"1685.93706"	"-2.75"	"-0.00232"	"9/94"	"9"	"94"	"227408.821350098"	"HCD"	"MS2"	"100"	"21.5"	"100.000"	"77.3701"	"26023"	"26023"	"26005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.6"	""	"26.8"	""	"42.6"	""	"26.1"	""	"35.1"	"46.1"	""	"887"	"24"	"36.000"	"29.000"	"0.190938551753073"	"20"	"0.0001889"	"0.00065"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYMASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"562.64911"	"1685.93277"	"1685.93706"	"-2.54"	"-0.00143"	"11/94"	"11"	"94"	"3742450.19506836"	"HCD"	"MS2"	"15.95082"	"85.7"	"100.000"	"76.7945"	"25788"	"25788"	"25774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.9"	""	"142.7"	""	"155.8"	""	"79.4"	""	"105.4"	"167.4"	""	"885"	"43"	"36.000"	"29.000"	"0.00244294266881735"	"18"	"0"	"8.482E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMGLTAFTNLK"	"[R].dmGLTAFTnLk.[I]"	"N-Term(TMT6plex); M2(Oxidation); N9(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"562.64923"	"1685.93314"	"1685.91843"	"8.72"	"0.00490"	"12/98"	"12"	"98"	"2913116.16461182"	"HCD"	"MS2"	"28.25591"	"105.7"	"100.000"	"53.3538"	"16200"	"16200"	"16185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.4"	""	"163.0"	""	"141.6"	""	"199.3"	""	"166.2"	"165.6"	""	"886"	"27"	"36.000"	"29.000"	"0.0849970252116938"	"21"	"0.0001889"	"0.0007494"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYMASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"843.47028"	"1685.93328"	"1685.93706"	"-2.24"	"-0.00189"	"10/94"	"10"	"94"	"1001845.97143555"	"HCD"	"MS2"	"100"	"83.9"	"100.000"	"76.7716"	"25779"	"25779"	"25765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.7"	""	"128.8"	""	"138.7"	""	"96.9"	""	"130.8"	"152.7"	""	"878"	"44"	"36.000"	"29.000"	"0.00195643093046504"	"15"	"0"	"7.674E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYMASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.64954"	"1685.93406"	"1685.93706"	"-1.78"	"-0.00100"	"8/94"	"8"	"94"	"850464.710083008"	"HCD"	"MS2"	"9.896"	"17.1"	"100.000"	"77.4647"	"26062"	"26062"	"26037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.9"	""	"24.3"	""	"26.5"	""	"23.3"	""	"29.2"	"36.9"	""	"884"	"16"	"36.000"	"29.000"	"1.22580748625611"	"14"	"0.0002277"	"0.001113"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYMASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9846"	"0.0000"	"1"	"1"	"1"	"843.47101"	"1685.93474"	"1685.93706"	"-1.37"	"-0.00116"	"18/94"	"18"	"94"	"3362491.77813721"	"HCD"	"MS2"	"0"	"240.0"	"100.000"	"77.0522"	"25894"	"25894"	"25877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"417.9"	""	"395.7"	""	"426.1"	""	"225.0"	"3.8"	"331.3"	"466.7"	""	"888"	"65"	"36.000"	"29.000"	"1.28642055293939E-05"	"18"	"0"	"6.494E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYMASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9846"	"0.0000"	"1"	"1"	"1"	"843.47113"	"1685.93498"	"1685.93706"	"-1.23"	"-0.00104"	"18/94"	"18"	"94"	"1857649.47106934"	"HCD"	"MS2"	"14.55551"	"146.8"	"100.000"	"76.8602"	"25764"	"25764"	"25751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.7"	""	"243.0"	""	"244.1"	""	"150.6"	""	"205.4"	"272.5"	""	"890"	"65"	"36.000"	"29.000"	"1.3879058649218E-05"	"17"	"0"	"4.005E-06"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYMASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9851"	"0.0000"	"1"	"1"	"1"	"843.47131"	"1685.93535"	"1685.93706"	"-1.01"	"-0.00085"	"18/94"	"18"	"94"	"1951065.70233154"	"HCD"	"MS2"	"0.8579614"	"148.9"	"100.000"	"77.1523"	"25883"	"25883"	"25865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"272.1"	""	"224.7"	""	"279.2"	""	"136.7"	"2.5"	"208.6"	"281.8"	""	"894"	"67"	"36.000"	"29.000"	"8.38122545106137E-06"	"18"	"0"	"7.002E-06"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYMASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"562.65009"	"1685.93570"	"1685.93706"	"-0.80"	"-0.00045"	"12/94"	"12"	"94"	"6474783.54724121"	"HCD"	"MS2"	"8.927112"	"158.5"	"100.000"	"76.8833"	"25774"	"25774"	"25761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"317.4"	""	"242.5"	""	"262.8"	""	"154.4"	""	"218.6"	"300.3"	""	"878"	"35"	"36.000"	"29.000"	"0.0126027267550884"	"19"	"0"	"0.0001113"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYMASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.65027"	"1685.93625"	"1685.93706"	"-0.48"	"-0.00027"	"12/94"	"12"	"94"	"3950506.97467041"	"HCD"	"MS2"	"5.9399"	"93.3"	"100.000"	"77.1871"	"25898"	"25898"	"25881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.9"	""	"148.3"	""	"173.9"	""	"82.1"	"1.0"	"132.4"	"184.2"	""	"892"	"39"	"36.000"	"29.000"	"0.00521596728394862"	"15"	"0"	"0.0001798"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYMASk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.65045"	"1685.93680"	"1685.93706"	"-0.15"	"-0.00008"	"13/94"	"13"	"94"	"6414907.63134766"	"HCD"	"MS2"	"4.872776"	"153.7"	"100.000"	"77.0958"	"25911"	"25911"	"25893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.5"	""	"244.2"	""	"279.3"	""	"147.2"	"0.7"	"208.7"	"296.8"	""	"882"	"39"	"36.000"	"29.000"	"0.00597638530846807"	"15"	"0"	"5.904E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFATVYVDAVK"	"[K].dFATVYVDAVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"562.65497"	"1685.95035"	"1685.95144"	"-0.65"	"-0.00036"	"8/94"	"8"	"94"	"7788293.98831177"	"HCD"	"MS2"	"38.71011"	"207.6"	"100.000"	"57.9991"	"18087"	"18087"	"18059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.4"	""	"254.2"	""	"201.7"	""	"325.9"	"4.0"	"493.1"	"495.5"	""	"861"	"37"	"36.000"	"29.000"	"0.00837477515138557"	"22"	"0"	"0.000138"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFATVYVDAVK"	"[K].dFATVYVDAVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"843.47888"	"1685.95049"	"1685.95144"	"-0.57"	"-0.00048"	"10/94"	"10"	"94"	"2684991.78240967"	"HCD"	"MS2"	"40.98692"	"209.1"	"100.000"	"57.9968"	"18086"	"18086"	"18059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.6"	""	"244.4"	""	"224.1"	""	"306.9"	"4.6"	"497.3"	"509.7"	""	"861"	"70"	"36.000"	"29.000"	"4.16843617120468E-06"	"20"	"0"	"7.016E-06"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFATVYVDAVK"	"[K].dFATVYVDAVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.65607"	"1685.95365"	"1685.95144"	"1.31"	"0.00073"	"9/94"	"9"	"94"	"6538856.44140625"	"HCD"	"MS2"	"36.43185"	"175.7"	"100.000"	"58.1589"	"18206"	"18206"	"18181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.8"	""	"212.1"	""	"189.1"	""	"279.3"	""	"401.6"	"413.3"	""	"840"	"16"	"36.000"	"29.000"	"1.17286841331968"	"14"	"0.0002277"	"0.001213"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFATVYVDAVK"	"[K].dFATVYVDAVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"843.48047"	"1685.95366"	"1685.95144"	"1.31"	"0.00111"	"10/94"	"10"	"94"	"2865447.91479492"	"HCD"	"MS2"	"38.20851"	"221.6"	"100.000"	"58.1635"	"18208"	"18208"	"18181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.5"	""	"251.1"	""	"233.6"	""	"322.2"	"2.3"	"533.9"	"549.3"	""	"840"	"72"	"36.000"	"29.000"	"2.56005496840871E-06"	"20"	"0"	"7.924E-06"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGAFYISSLLEK"	"[M].sTGAFYISSLLEk.[M]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"843.96106"	"1686.91484"	"1686.91517"	"-0.19"	"-0.00016"	"4/118"	"4"	"118"	"56421.604309082"	"HCD"	"MS2"	"22.97359"	"4.0"	"100.000"	"90.1687"	"31134"	"31134"	"31125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.4"	""	"7.2"	""	"6.3"	""	"7.0"	""	"5.0"	"8.3"	""	"1002"	"2"	"36.000"	"30.000"	"33.7938541876659"	"13"	"0.007472"	"0.2883"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLEQTLTK"	"[K].mQHLEQTLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"843.98206"	"1686.95683"	"1686.96130"	"-2.65"	"-0.00223"	"15/96"	"15"	"96"	"708796.412719727"	"HCD"	"MS2"	"0"	"58.1"	"100.000"	"36.5167"	"9348"	"9348"	"9322"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.2"	""	"81.8"	""	"87.8"	""	"71.0"	"0.1"	"107.9"	"94.7"	""	"952"	"57"	"36.000"	"29.000"	"9.06999301750505E-05"	"20"	"0"	"3.927E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLEQTLTK"	"[K].mQHLEQTLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"562.99072"	"1686.95761"	"1686.96130"	"-2.18"	"-0.00123"	"8/96"	"8"	"96"	"35228934.0688477"	"HCD"	"MS2"	"12.12003"	"573.0"	"59.063"	"36.5213"	"9393"	"9393"	"9369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"961.4"	""	"822.3"	""	"846.9"	""	"795.6"	""	"1015.1"	"980.8"	""	"944"	"60"	"36.000"	"29.000"	"4.94244674680025E-05"	"21"	"0"	"2.003E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLEQTLTK"	"[K].mQHLEQTLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"843.98260"	"1686.95793"	"1686.96130"	"-1.99"	"-0.00168"	"15/96"	"15"	"96"	"403928.957397461"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"36.6404"	"9442"	"9442"	"9415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.2"	""	"49.3"	""	"50.4"	""	"46.9"	"2.0"	"58.2"	"61.8"	""	"944"	"53"	"36.000"	"29.000"	"0.000240404171138996"	"19"	"0"	"3.103E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLEQTLTK"	"[K].mQHLEQTLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"562.99139"	"1686.95963"	"1686.96130"	"-0.99"	"-0.00056"	"8/96"	"8"	"96"	"30704767.5234375"	"HCD"	"MS2"	"18.71788"	"849.9"	"97.862"	"36.4297"	"9312"	"9312"	"9290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1415.0"	""	"1240.2"	""	"1221.1"	""	"1143.1"	"1.6"	"1576.8"	"1446.7"	""	"927"	"58"	"36.000"	"29.000"	"8.07327485817013E-05"	"20"	"0"	"2.284E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLEAQSHFR"	"[K].kLLEAQSHFR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"4"	"4"	"0.9565"	"0.0000"	"1"	"1"	"1"	"422.50626"	"1687.00319"	"1687.00555"	"-1.39"	"-0.00059"	"8/96"	"8"	"96"	"6331087.68218994"	"HCD"	"MS2"	"42.59824"	"271.4"	"100.000"	"31.3691"	"7292"	"7292"	"7264"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"391.1"	""	"383.8"	""	"388.9"	""	"373.7"	""	"501.7"	"534.5"	""	"730"	"23"	"35.000"	"28.000"	"0.17270020952094"	"15"	"0.0001889"	"0.0005159"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLEAQSHFR"	"[K].kLLEAQSHFR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"422.50632"	"1687.00344"	"1687.00555"	"-1.25"	"-0.00053"	"8/96"	"8"	"96"	"6203030.61169434"	"HCD"	"MS2"	"51.1764"	"265.6"	"100.000"	"31.2587"	"7205"	"7205"	"7174"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"362.0"	""	"370.6"	""	"391.8"	""	"376.5"	"1.6"	"484.1"	"530.4"	""	"730"	"18"	"35.000"	"28.000"	"0.549911579158161"	"14"	"0.0001889"	"0.0007335"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPQVPDVHLPK"	"[K].vPQVPDVHLPk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.01373"	"1687.02665"	"1687.03070"	"-2.40"	"-0.00135"	"11/96"	"11"	"96"	"8481183.50305176"	"HCD"	"MS2"	"13.73858"	"203.0"	"100.000"	"46.3600"	"13358"	"13358"	"13336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.2"	""	"244.2"	""	"235.3"	""	"371.6"	""	"404.8"	"418.2"	""	"616"	"33"	"34.000"	"27.000"	"0.013789569768632"	"15"	"0"	"0.0001247"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPQVPDVHLPK"	"[K].vPQVPDVHLPk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"422.51270"	"1687.02895"	"1687.03070"	"-1.03"	"-0.00044"	"9/96"	"9"	"96"	"5964891.06768799"	"HCD"	"MS2"	"5.115734"	"132.0"	"100.000"	"46.8172"	"13593"	"13593"	"13570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.1"	""	"159.2"	""	"168.5"	""	"236.0"	"4.7"	"260.6"	"271.3"	""	"549"	"25"	"34.000"	"27.000"	"0.0860086931324628"	"14"	"0.0001889"	"0.0004973"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPQVPDVHLPK"	"[K].vPQVPDVHLPk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.01483"	"1687.02994"	"1687.03070"	"-0.45"	"-0.00025"	"5/96"	"5"	"96"	"12027311.1567383"	"HCD"	"MS2"	"11.08446"	"259.4"	"100.000"	"46.7024"	"13546"	"13546"	"13522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"291.9"	""	"310.3"	""	"320.5"	""	"490.8"	""	"535.3"	"520.0"	""	"572"	"27"	"34.000"	"27.000"	"0.053255692108558"	"14"	"0"	"7.551E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPQVPDVHLPK"	"[K].vPQVPDVHLPk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"422.51309"	"1687.03054"	"1687.03070"	"-0.09"	"-0.00004"	"6/96"	"6"	"96"	"4837913.70849609"	"HCD"	"MS2"	"0"	"109.9"	"100.000"	"46.5712"	"13445"	"13445"	"13416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.8"	""	"118.8"	""	"147.7"	""	"198.7"	""	"228.4"	"225.8"	""	"565"	"18"	"34.000"	"27.000"	"0.470997337545676"	"14"	"0.0005564"	"0.00355"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALEVGDIVK"	"[K].tALALEVGDIVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"563.01813"	"1687.03983"	"1687.04059"	"-0.45"	"-0.00025"	"13/104"	"13"	"104"	"1505793.16870117"	"HCD"	"MS2"	"15.08567"	"66.8"	"100.000"	"64.2803"	"20701"	"20701"	"20675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.0"	""	"90.0"	""	"93.1"	""	"108.5"	""	"125.7"	"124.2"	""	"500"	"36"	"33.000"	"26.000"	"0.00648544840529703"	"23"	"0.0001889"	"0.0004842"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALEVGDIVK"	"[K].tALALEVGDIVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"563.01843"	"1687.04074"	"1687.04059"	"0.09"	"0.00005"	"13/104"	"13"	"104"	"1610685.73706055"	"HCD"	"MS2"	"32.64557"	"70.0"	"100.000"	"64.2359"	"20630"	"20630"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.4"	""	"96.9"	""	"101.6"	""	"110.8"	"0.1"	"129.0"	"134.4"	""	"489"	"34"	"33.000"	"26.000"	"0.0104780113237174"	"24"	"0"	"8.889E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALEVGDIVK"	"[K].tALALEVGDIVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"844.02441"	"1687.04155"	"1687.04059"	"0.57"	"0.00048"	"18/104"	"18"	"104"	"398937.403808594"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"64.2412"	"20685"	"20685"	"20659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.4"	""	"36.2"	""	"43.0"	""	"60.2"	"0.1"	"57.1"	"66.7"	""	"489"	"58"	"33.000"	"26.000"	"3.50169941372381E-05"	""	"0"	"1.499E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vNSGAFPAPIEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"844.49139"	"1687.97551"	"1687.97833"	"-1.67"	"-0.00141"	"10/124"	"10"	"124"	"581908.214172363"	"HCD"	"MS2"	"100"	"46.9"	"100.000"	"45.9639"	"13245"	"13245"	"13227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.8"	""	"64.5"	""	"62.1"	""	"79.4"	"0.3"	"73.4"	"88.9"	""	"863"	"28"	"36.000"	"29.000"	"0.0729425262004069"	"20"	"0.0002277"	"0.001199"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vNSGAFPAPIEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"844.49164"	"1687.97600"	"1687.97833"	"-1.38"	"-0.00116"	"18/124"	"18"	"124"	"8972775.09692383"	"HCD"	"MS2"	"0"	"398.2"	"69.681"	"45.6549"	"13123"	"13123"	"13111"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"647.6"	""	"550.0"	""	"607.1"	""	"608.5"	"5.0"	"659.1"	"688.3"	""	"857"	"66"	"36.000"	"29.000"	"1.17747264460438E-05"	""	"0"	"6.692E-06"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vNSGAFPAPIEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"563.33020"	"1687.97605"	"1687.97833"	"-1.35"	"-0.00076"	"13/124"	"13"	"124"	"19974176.7200928"	"HCD"	"MS2"	"9.138233"	"183.7"	"34.405"	"45.4547"	"12990"	"12990"	"12980"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.5"	""	"254.3"	""	"268.8"	"2.5"	"287.5"	"5.8"	"319.6"	"338.4"	""	"857"	"47"	"36.000"	"29.000"	"0.000954884461462324"	"26"	"0"	"4.98E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vNSGAFPAPIEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6029"	"0.0000"	"1"	"1"	"1"	"844.49194"	"1687.97661"	"1687.97833"	"-1.02"	"-0.00086"	"18/124"	"18"	"124"	"9079530.70123291"	"HCD"	"MS2"	"0"	"369.9"	"64.946"	"45.3953"	"12968"	"12968"	"12955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"571.9"	""	"504.9"	""	"585.3"	""	"547.5"	"2.2"	"603.0"	"684.2"	""	"819"	"68"	"36.000"	"29.000"	"6.2698031555879E-06"	""	"0"	"6.799E-06"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vNSGAFPAPIEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"563.33044"	"1687.97678"	"1687.97833"	"-0.92"	"-0.00052"	"11/124"	"11"	"124"	"22810786.2843018"	"HCD"	"MS2"	"8.657181"	"271.9"	"45.205"	"45.6961"	"13139"	"13139"	"13134"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"408.7"	""	"364.8"	""	"417.3"	""	"399.4"	"7.2"	"480.1"	"496.3"	""	"822"	"44"	"36.000"	"29.000"	"0.00172918644266007"	"26"	"0"	"6.784E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vNSGAFPAPIEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6351"	"0.0000"	"1"	"1"	"1"	"844.49219"	"1687.97710"	"1687.97833"	"-0.73"	"-0.00061"	"10/124"	"10"	"124"	"6262983.21228027"	"HCD"	"MS2"	"0"	"389.6"	"100.000"	"45.3819"	"13011"	"13011"	"12987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"712.3"	""	"568.8"	""	"553.2"	""	"625.2"	"3.1"	"596.6"	"621.1"	""	"876"	"74"	"36.000"	"29.000"	"1.93407855940751E-06"	""	"0"	"5.838E-06"	"1.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vNSGAFPAPIEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"563.33069"	"1687.97751"	"1687.97833"	"-0.48"	"-0.00027"	"9/124"	"9"	"124"	"2777012.82958984"	"HCD"	"MS2"	"70.94759"	"149.1"	"100.000"	"46.0510"	"13280"	"13280"	"13257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.0"	""	"184.9"	""	"203.2"	""	"229.7"	""	"304.7"	"314.1"	""	"872"	"15"	"36.000"	"29.000"	"1.28081524825523"	"24"	"0.0001308"	"0.0002545"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vNSGAFPAPIEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"563.33069"	"1687.97751"	"1687.97833"	"-0.48"	"-0.00027"	"11/124"	"11"	"124"	"74702534.4289551"	"HCD"	"MS2"	"3.885509"	"322.1"	"19.657"	"45.4416"	"13036"	"13036"	"13019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"546.5"	""	"485.1"	""	"464.7"	""	"491.5"	"3.0"	"526.8"	"528.0"	""	"872"	"40"	"36.000"	"29.000"	"0.00426075428336733"	"25"	"0"	"8.243E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vNSGAFPAPIEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"844.49249"	"1687.97771"	"1687.97833"	"-0.37"	"-0.00031"	"10/124"	"10"	"124"	"5132788.47290039"	"HCD"	"MS2"	"0"	"323.9"	"100.000"	"45.1200"	"12855"	"12855"	"12832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"565.7"	""	"489.9"	""	"433.1"	""	"516.4"	"2.7"	"523.4"	"530.6"	""	"872"	"78"	"36.000"	"29.000"	"6.46377885123635E-07"	""	"0"	"2.906E-06"	"1.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vNSGAFPAPIEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"563.33087"	"1687.97806"	"1687.97833"	"-0.16"	"-0.00009"	"11/124"	"11"	"124"	"72412008.6582031"	"HCD"	"MS2"	"5.561959"	"362.8"	"23.503"	"45.1822"	"12881"	"12881"	"12864"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"609.9"	""	"536.8"	""	"535.7"	""	"542.1"	"1.0"	"611.1"	"594.3"	""	"858"	"39"	"36.000"	"29.000"	"0.00597664268463535"	"25"	"0"	"7.257E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVFEPPPGVK"	"[R].iFVFEPPPGVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"844.50946"	"1688.01164"	"1688.01874"	"-4.20"	"-0.00355"	"13/80"	"13"	"80"	"1662947.96209717"	"HCD"	"MS2"	"0"	"79.9"	"100.000"	"69.6972"	"22903"	"22903"	"22882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.0"	""	"105.5"	""	"128.8"	""	"122.9"	""	"149.9"	"148.2"	""	"712"	"28"	"35.000"	"28.000"	"0.0521735031380305"	"15"	"0.0001889"	"0.0005113"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVFEPPPGVK"	"[R].iFVFEPPPGVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"563.34308"	"1688.01468"	"1688.01874"	"-2.40"	"-0.00135"	"12/80"	"12"	"80"	"2772513.35235596"	"HCD"	"MS2"	"17.60572"	"71.5"	"100.000"	"69.4909"	"22819"	"22819"	"22794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.7"	""	"111.7"	""	"93.5"	""	"114.2"	"0.2"	"136.6"	"124.2"	""	"687"	"26"	"35.000"	"28.000"	"0.0874836191762961"	"15"	"0.0001308"	"0.0002771"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVFEPPPGVK"	"[R].iFVFEPPPGVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"563.34387"	"1688.01706"	"1688.01874"	"-0.99"	"-0.00056"	"12/80"	"12"	"80"	"11405919.2662964"	"HCD"	"MS2"	"3.230236"	"170.0"	"83.793"	"70.0600"	"22999"	"22999"	"22979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.2"	""	"230.3"	""	"261.7"	""	"295.2"	""	"295.8"	"306.8"	""	"668"	"36"	"35.000"	"28.000"	"0.00854567686226486"	"20"	"0.0001859"	"0.0003259"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVFEPPPGVK"	"[R].iFVFEPPPGVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"563.34393"	"1688.01725"	"1688.01874"	"-0.88"	"-0.00050"	"12/80"	"12"	"80"	"6008187.69921875"	"HCD"	"MS2"	"3.502827"	"111.0"	"100.000"	"70.1017"	"23068"	"23068"	"23050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.9"	""	"143.3"	""	"165.0"	""	"176.0"	""	"211.1"	"219.0"	""	"668"	"35"	"35.000"	"28.000"	"0.0106597364360366"	"19"	"0.0001308"	"0.000262"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVFEPPPGVK"	"[R].iFVFEPPPGVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"844.51233"	"1688.01738"	"1688.01874"	"-0.80"	"-0.00068"	"10/80"	"10"	"80"	"2438524.40942383"	"HCD"	"MS2"	"0"	"106.0"	"100.000"	"69.9864"	"23021"	"23021"	"23002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.3"	""	"148.4"	""	"149.0"	""	"165.3"	"0.6"	"195.3"	"206.5"	""	"678"	"62"	"35.000"	"28.000"	"2.1938134673877E-05"	"25"	"0"	"0.0001519"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVFEPPPGVK"	"[R].iFVFEPPPGVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"563.34406"	"1688.01761"	"1688.01874"	"-0.67"	"-0.00037"	"12/80"	"12"	"80"	"9073720.25817871"	"HCD"	"MS2"	"4.244145"	"163.2"	"100.000"	"69.8003"	"22945"	"22945"	"22929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"221.1"	""	"216.0"	""	"250.1"	""	"250.9"	"0.0"	"305.1"	"303.0"	""	"675"	"33"	"35.000"	"28.000"	"0.0169150691349204"	"19"	"0.0001308"	"0.0002532"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVFEPPPGVK"	"[R].iFVFEPPPGVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"563.34436"	"1688.01853"	"1688.01874"	"-0.12"	"-0.00007"	"9/80"	"9"	"80"	"5054186.50189209"	"HCD"	"MS2"	"0"	"107.7"	"100.000"	"69.7524"	"22874"	"22874"	"22858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.9"	""	"142.2"	""	"143.8"	""	"178.9"	"2.0"	"203.0"	"205.9"	""	"663"	"32"	"35.000"	"28.000"	"0.0214527777120655"	"15"	"7.476E-05"	"0.0001928"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVFEPPPGVK"	"[R].iFVFEPPPGVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"844.51312"	"1688.01897"	"1688.01874"	"0.14"	"0.00012"	"10/80"	"10"	"80"	"2540452.87341309"	"HCD"	"MS2"	"0"	"119.0"	"100.000"	"70.0896"	"23012"	"23012"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.3"	""	"154.1"	""	"171.1"	""	"186.0"	"4.0"	"224.4"	"219.3"	""	"663"	"55"	"35.000"	"28.000"	"0.000113889459728808"	"23"	"0"	"0.0001401"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVFEPPPGVK"	"[R].iFVFEPPPGVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"844.51483"	"1688.02239"	"1688.01874"	"2.16"	"0.00183"	"14/80"	"14"	"80"	"1711516.9017334"	"HCD"	"MS2"	"0"	"79.1"	"100.000"	"69.7982"	"22893"	"22893"	"22869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.8"	""	"101.8"	""	"115.1"	""	"127.6"	"0.2"	"152.4"	"143.2"	""	"639"	"31"	"35.000"	"28.000"	"0.0232525647549515"	"16"	"0.0001889"	"0.000487"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.35175"	"1688.04068"	"1688.04324"	"-1.51"	"-0.00085"	"9/94"	"9"	"94"	"2117300.80358887"	"HCD"	"MS2"	"15.47043"	"68.6"	"100.000"	"68.1908"	"22288"	"22288"	"22266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.0"	""	"84.6"	""	"86.3"	""	"130.1"	"1.8"	"123.5"	"134.8"	""	"469"	"27"	"33.000"	"26.000"	"0.0447860589133783"	"14"	"0.0001308"	"0.000257"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.35187"	"1688.04105"	"1688.04324"	"-1.30"	"-0.00073"	"10/94"	"10"	"94"	"8970061.40863037"	"HCD"	"MS2"	"27.56336"	"189.5"	"100.000"	"67.8633"	"22155"	"22155"	"22138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"236.1"	""	"206.4"	""	"225.8"	""	"401.2"	"0.9"	"366.3"	"360.9"	""	"470"	"34"	"33.000"	"26.000"	"0.0104248031323887"	"15"	"0"	"0.0001627"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.35211"	"1688.04178"	"1688.04324"	"-0.86"	"-0.00048"	"10/94"	"10"	"94"	"8581245.83837891"	"HCD"	"MS2"	"24.30682"	"190.9"	"100.000"	"67.9986"	"22158"	"22158"	"22138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.4"	""	"203.3"	""	"210.4"	""	"422.6"	"4.4"	"357.7"	"368.0"	""	"469"	"34"	"33.000"	"26.000"	"0.0101424493377709"	"15"	"0"	"0.0001164"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"844.52460"	"1688.04192"	"1688.04324"	"-0.78"	"-0.00066"	"8/94"	"8"	"94"	"992659.169677734"	"HCD"	"MS2"	"27.45421"	"54.7"	"100.000"	"67.7298"	"22100"	"22100"	"22074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.2"	""	"62.2"	""	"69.1"	""	"112.5"	"1.8"	"100.1"	"96.3"	""	"469"	"18"	"33.000"	"26.000"	"0.348451908116303"	"18"	"0.000523"	"0.003155"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"844.52502"	"1688.04277"	"1688.04324"	"-0.27"	"-0.00023"	"10/94"	"10"	"94"	"1100714.09246826"	"HCD"	"MS2"	"0"	"62.6"	"100.000"	"68.1948"	"22238"	"22238"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.3"	""	"60.6"	""	"61.9"	""	"149.0"	"0.7"	"130.0"	"121.1"	""	"460"	"58"	"33.000"	"26.000"	"3.84350841291463E-05"	"18"	"0.0001308"	"0.0002449"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"563.35266"	"1688.04343"	"1688.04324"	"0.11"	"0.00006"	"6/94"	"6"	"94"	"1887779.64416504"	"HCD"	"MS2"	"17.16757"	"76.8"	"100.000"	"68.3304"	"22294"	"22294"	"22266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.1"	""	"102.0"	""	"99.5"	""	"124.5"	""	"142.8"	"166.3"	""	"457"	"21"	"33.000"	"26.000"	"0.18025453687584"	"17"	"0.0001889"	"0.0008064"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"563.35272"	"1688.04361"	"1688.04324"	"0.22"	"0.00013"	"11/94"	"11"	"94"	"428758.068115234"	"HCD"	"MS2"	"61.46387"	"12.9"	"100.000"	"81.0429"	"27471"	"27471"	"27440"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.6"	""	"15.7"	""	"14.8"	""	"25.7"	""	"28.3"	"25.8"	""	"455"	"8"	"33.000"	"26.000"	"3.94440409489066"	"15"	"0.00103"	"0.01204"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"844.52551"	"1688.04375"	"1688.04324"	"0.30"	"0.00026"	"8/94"	"8"	"94"	"1286170.43939209"	"HCD"	"MS2"	"40.10249"	"75.2"	"100.000"	"67.8968"	"22117"	"22117"	"22090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.5"	""	"82.0"	""	"92.6"	""	"156.9"	"0.2"	"150.4"	"134.9"	""	"455"	"19"	"33.000"	"26.000"	"0.306889055789601"	"15"	"0.0006037"	"0.00375"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPVLISAMK"	"[K].eLLPVLISAmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"844.52557"	"1688.04387"	"1688.04324"	"0.38"	"0.00032"	"10/94"	"10"	"94"	"1617061.3927002"	"HCD"	"MS2"	"1.896802"	"79.7"	"100.000"	"68.0245"	"22220"	"22220"	"22202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.7"	""	"79.0"	""	"88.9"	""	"189.3"	"1.2"	"152.2"	"150.0"	""	"455"	"57"	"33.000"	"26.000"	"4.31500597075536E-05"	"22"	"0"	"7.296E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKPTLPFGK"	"[K].ikPTLPFGk.[I]"	"N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35543"	"Hematopoietic prostaglandin D synthase OS=Rattus norvegicus OX=10116 GN=Hpgds PE=1 SV=3"	"O35543"	"Hematopoietic prostaglandin D synthase OS=Rattus norvegicus OX=10116 GN=Hpgds PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.37372"	"1688.10660"	"1688.10777"	"-0.69"	"-0.00039"	"4/78"	"4"	"78"	"3581847.03942871"	"HCD"	"MS2"	"65.14675"	"210.6"	"100.000"	"46.1171"	"13259"	"13259"	"13229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.8"	""	"223.0"	""	"258.3"	""	"359.1"	"2.1"	"456.5"	"398.9"	""	"201"	"6"	"30.000"	"23.000"	"2.31294902649555"	"13"	"0.001686"	"0.02336"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKPTLPFGK"	"[K].ikPTLPFGk.[I]"	"N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35543"	"Hematopoietic prostaglandin D synthase OS=Rattus norvegicus OX=10116 GN=Hpgds PE=1 SV=3"	"O35543"	"Hematopoietic prostaglandin D synthase OS=Rattus norvegicus OX=10116 GN=Hpgds PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.37390"	"1688.10715"	"1688.10777"	"-0.37"	"-0.00021"	"8/78"	"8"	"78"	"3849275.13220215"	"HCD"	"MS2"	"50.78462"	"218.7"	"100.000"	"46.3490"	"13402"	"13402"	"13376"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"333.4"	""	"236.1"	""	"254.2"	""	"370.4"	""	"475.7"	"406.4"	""	"201"	"3"	"30.000"	"23.000"	"5.42208175627704"	"13"	"0.0006037"	"0.004786"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"844.98444"	"1688.96160"	"1688.96234"	"-0.44"	"-0.00037"	"9/124"	"9"	"124"	"1127388.17529297"	"HCD"	"MS2"	"20.27442"	"85.6"	"100.000"	"49.1350"	"14494"	"14494"	"14463"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.4"	""	"112.2"	""	"124.2"	""	"146.3"	"2.8"	"148.9"	"145.3"	""	"998"	"62"	"36.000"	"29.000"	"3.50833087622032E-05"	"26"	"0"	"7.336E-06"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"844.98767"	"1688.96807"	"1688.96234"	"3.39"	"0.00286"	"11/124"	"11"	"124"	"520422.148498535"	"HCD"	"MS2"	"0"	"46.5"	"100.000"	"48.3205"	"14208"	"14208"	"14186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.0"	""	"93.9"	""	"79.5"	""	"61.5"	"1.3"	"64.9"	"62.2"	""	"973"	"20"	"36.000"	"29.000"	"0.435594958439877"	"15"	"0.0006037"	"0.004512"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"844.98773"	"1688.96819"	"1688.96234"	"3.46"	"0.00292"	"8/124"	"8"	"124"	"439500.941589355"	"HCD"	"MS2"	"0"	"41.9"	"100.000"	"48.0800"	"14062"	"14062"	"14037"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.2"	""	"79.8"	""	"66.3"	""	"53.6"	"0.5"	"67.8"	"63.7"	""	"973"	"35"	"36.000"	"29.000"	"0.0172616713862134"	"19"	"0.0001889"	"0.0008696"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAGDHPIELLLR"	"[R].lLAGDHPIELLLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P24054"	"SPARC-like protein 1 OS=Rattus norvegicus OX=10116 GN=Sparcl1 PE=1 SV=1"	"P24054"	"SPARC-like protein 1 OS=Rattus norvegicus OX=10116 GN=Sparcl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"563.67877"	"1689.02176"	"1689.02606"	"-2.54"	"-0.00143"	"8/104"	"8"	"104"	"2471806.7154541"	"HCD"	"MS2"	"38.26407"	"77.3"	"100.000"	"63.1741"	"20249"	"20249"	"20227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.1"	""	"96.8"	""	"93.6"	""	"133.1"	"1.1"	"150.7"	"162.9"	""	"622"	"21"	"34.000"	"27.000"	"0.259274848416706"	"15"	"0"	"0.0001797"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAGDHPIELLLR"	"[R].lLAGDHPIELLLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P24054"	"SPARC-like protein 1 OS=Rattus norvegicus OX=10116 GN=Sparcl1 PE=1 SV=1"	"P24054"	"SPARC-like protein 1 OS=Rattus norvegicus OX=10116 GN=Sparcl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"563.67987"	"1689.02506"	"1689.02606"	"-0.59"	"-0.00033"	"7/104"	"7"	"104"	"3995051.40423584"	"HCD"	"MS2"	"28.18169"	"96.9"	"100.000"	"63.0100"	"20129"	"20129"	"20105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.6"	""	"127.2"	""	"121.5"	""	"171.0"	""	"171.9"	"213.4"	""	"594"	"32"	"34.000"	"27.000"	"0.0197131691909367"	"16"	"0"	"3.617E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDMLESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.42065"	"1689.83403"	"1689.83554"	"-0.89"	"-0.00075"	"9/106"	"9"	"106"	"579576.591003418"	"HCD"	"MS2"	"13.78283"	"45.5"	"100.000"	"64.0407"	"20603"	"20603"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.6"	""	"54.3"	""	"65.5"	""	"69.5"	"0.9"	"81.4"	"97.5"	""	"697"	"26"	"35.000"	"28.000"	"0.0893722686726425"	"15"	"0.0004557"	"0.002624"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDMLESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"845.42072"	"1689.83415"	"1689.83554"	"-0.82"	"-0.00069"	"17/106"	"17"	"106"	"1785806.34460449"	"HCD"	"MS2"	"0"	"108.8"	"100.000"	"63.6620"	"20395"	"20395"	"20377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.7"	""	"137.6"	""	"142.8"	""	"169.4"	"6.5"	"200.9"	"231.0"	""	"712"	"46"	"35.000"	"28.000"	"0.000892174894079433"	"18"	"0"	"5.828E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDMLESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"845.42188"	"1689.83647"	"1689.83554"	"0.55"	"0.00047"	"17/106"	"17"	"106"	"619086.371520996"	"HCD"	"MS2"	"9.429683"	"48.9"	"100.000"	"63.9893"	"20529"	"20529"	"20505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.8"	""	"59.8"	""	"68.3"	""	"72.5"	""	"84.7"	"116.2"	""	"717"	"31"	"35.000"	"28.000"	"0.0268837074045686"	"16"	"0.0003839"	"0.001592"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDMLESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"845.42218"	"1689.83708"	"1689.83554"	"0.91"	"0.00077"	"18/106"	"18"	"106"	"1873139.59295654"	"HCD"	"MS2"	"17.27692"	"107.6"	"100.000"	"63.7204"	"20472"	"20472"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.7"	""	"127.3"	""	"151.1"	""	"165.2"	"3.7"	"198.9"	"219.0"	""	"724"	"50"	"35.000"	"28.000"	"0.000348906106551878"	"19"	"0"	"3.069E-06"	"1.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNTAAYLLYAFTR"	"[R].gNTAAYLLYAFTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"845.45789"	"1689.90849"	"1689.91617"	"-4.54"	"-0.00384"	"9/136"	"9"	"136"	"529126.631164551"	"HCD"	"MS2"	"46.66589"	"41.6"	"100.000"	"75.4152"	"25237"	"25237"	"25215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.1"	""	"65.7"	""	"66.5"	""	"66.0"	""	"71.6"	"65.6"	""	"1064"	"34"	"37.000"	"30.000"	"0.0227987812851438"	"17"	"0"	"1.025E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNTAAYLLYAFTR"	"[R].gNTAAYLLYAFTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"845.46014"	"1689.91301"	"1689.91617"	"-1.87"	"-0.00158"	"8/136"	"8"	"136"	"410240.055175781"	"HCD"	"MS2"	"21.17021"	"32.5"	"100.000"	"75.4364"	"25194"	"25194"	"25169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.1"	""	"51.1"	""	"46.4"	""	"59.2"	""	"50.4"	"51.0"	""	"1084"	"36"	"37.000"	"30.000"	"0.0151355876195064"	"22"	"0.0001308"	"0.000233"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGMIPVPYVEK"	"[R].vGMIPVPYVEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"845.50421"	"1690.00115"	"1690.00137"	"-0.13"	"-0.00011"	"17/80"	"17"	"80"	"1391989.02062988"	"HCD"	"MS2"	"0"	"86.4"	"100.000"	"62.9050"	"20139"	"20139"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.8"	""	"108.7"	""	"116.3"	""	"130.6"	"0.6"	"167.5"	"161.8"	""	"729"	"47"	"35.000"	"28.000"	"0.000697746284670186"	"24"	"0"	"0.000111"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGMIPVPYVEK"	"[R].vGMIPVPYVEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"Q5U2U2"	"Crk-like protein OS=Rattus norvegicus OX=10116 GN=Crkl PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"845.50458"	"1690.00188"	"1690.00137"	"0.30"	"0.00025"	"9/80"	"9"	"80"	"1079401.76257324"	"HCD"	"MS2"	"0"	"67.6"	"100.000"	"62.7819"	"20036"	"20036"	"20009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.2"	""	"85.9"	""	"96.3"	""	"99.0"	"0.1"	"120.4"	"132.7"	""	"749"	"45"	"35.000"	"28.000"	"0.00119523092673524"	"20"	"0"	"0.0001373"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEWDLPLDGTLR"	"[R].fEWDLPLDGTLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"845.95300"	"1690.89873"	"1690.90019"	"-0.86"	"-0.00073"	"10/104"	"10"	"104"	"613411.672119141"	"HCD"	"MS2"	"0"	"33.9"	"100.000"	"78.3425"	"26420"	"26420"	"26399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.6"	""	"42.4"	""	"44.2"	""	"56.9"	"1.3"	"67.4"	"65.7"	""	"1064"	"44"	"37.000"	"30.000"	"0.00190507304538602"	"25"	"0"	"5.565E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEWDLPLDGTLR"	"[R].fEWDLPLDGTLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"845.95392"	"1690.90056"	"1690.90019"	"0.22"	"0.00019"	"6/104"	"6"	"104"	"386216.809997559"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"78.3477"	"26371"	"26371"	"26353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.9"	""	"31.4"	""	"30.4"	""	"42.2"	""	"44.0"	"52.1"	""	"1072"	"28"	"37.000"	"30.000"	"0.082825637959259"	"27"	"0.0001889"	"0.0004758"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVVESWIGEK"	"[K].aDVVESWIGEk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"564.31781"	"1690.93888"	"1690.94161"	"-1.61"	"-0.00091"	"11/96"	"11"	"96"	"3759536.73187256"	"HCD"	"MS2"	"22.97221"	"104.2"	"100.000"	"63.5637"	"20408"	"20408"	"20387"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.5"	""	"129.0"	""	"125.7"	""	"166.3"	""	"217.2"	"232.9"	""	"1098"	"47"	"37.000"	"30.000"	"0.00116834833624451"	"21"	"0.0001859"	"0.0003383"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVVESWIGEK"	"[K].aDVVESWIGEk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"564.31915"	"1690.94291"	"1690.94161"	"0.77"	"0.00043"	"11/96"	"11"	"96"	"3964692.80767822"	"HCD"	"MS2"	"16.5287"	"106.0"	"100.000"	"63.4822"	"20322"	"20322"	"20297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.7"	""	"139.5"	""	"122.2"	""	"159.4"	""	"224.6"	"239.8"	""	"1113"	"43"	"37.000"	"30.000"	"0.00250302489248115"	"23"	"0.0001308"	"0.0002739"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFVALSTNTDK"	"[K].hFVALSTNTDk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.7800"	"0.0000"	"1"	"1"	"1"	"564.32159"	"1690.95023"	"1690.95284"	"-1.54"	"-0.00087"	"12/94"	"12"	"94"	"7457207.44525146"	"HCD"	"MS2"	"0"	"239.2"	"87.213"	"33.9810"	"8309"	"8309"	"8300"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"339.1"	""	"291.9"	""	"337.8"	""	"403.0"	""	"452.9"	"443.6"	""	"1075"	"50"	"37.000"	"30.000"	"0.00057197687229557"	"27"	"0"	"0.0001641"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLMYGPPGTGK"	"[R].nVLMYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3KRE0"	"ATPase family AAA domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Atad3 PE=1 SV=1"	"Q3KRE0"	"ATPase family AAA domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Atad3 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"846.47913"	"1691.95098"	"1691.95548"	"-2.66"	"-0.00225"	"13/110"	"13"	"110"	"1195508.53076172"	"HCD"	"MS2"	"0"	"83.1"	"100.000"	"43.5551"	"12266"	"12266"	"12244"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.6"	""	"128.9"	""	"144.4"	""	"63.9"	"1.2"	"148.8"	"136.8"	""	"1064"	"38"	"37.000"	"30.000"	"0.00816416234849225"	"20"	"0.0003839"	"0.001558"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLMYGPPGTGK"	"[R].nVLMYGPPGTGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3KRE0"	"ATPase family AAA domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Atad3 PE=1 SV=1"	"Q3KRE0"	"ATPase family AAA domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Atad3 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"846.47992"	"1691.95256"	"1691.95548"	"-1.73"	"-0.00146"	"8/110"	"8"	"110"	"870182.15057373"	"HCD"	"MS2"	"0"	"64.1"	"100.000"	"43.4034"	"12156"	"12156"	"12127"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.7"	""	"92.9"	""	"101.6"	""	"60.1"	""	"109.4"	"126.9"	""	"1044"	"36"	"37.000"	"30.000"	"0.0123216963772026"	"20"	"0.0008125"	"0.007728"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILYLTPEQEK"	"[K].iLYLTPEQEk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"846.49054"	"1691.97380"	"1691.99839"	"-14.53"	"-0.01230"	"9/84"	"9"	"84"	"814762.382568359"	"HCD"	"MS2"	"15.87244"	"79.2"	"100.000"	"52.3792"	"15861"	"15861"	"15830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.4"	""	"93.0"	""	"84.8"	""	"137.0"	""	"157.4"	"181.2"	""	"874"	"19"	"36.000"	"29.000"	"0.530250927653195"	"16"	"0.0002277"	"0.001174"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIDVMTLWK"	"[R].dLIDVMTLWk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"564.66455"	"1691.97910"	"1691.98064"	"-0.91"	"-0.00051"	"9/84"	"9"	"84"	"190215.690246582"	"HCD"	"MS2"	"16.71623"	"7.5"	"100.000"	"89.5326"	"30856"	"30856"	"30838"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.9"	""	"10.4"	""	"10.9"	""	"15.1"	""	"12.2"	"15.4"	""	"817"	"32"	"36.000"	"29.000"	"0.0264357758533296"	"19"	"7.476E-05"	"0.0001931"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIDVMTLWK"	"[R].dLIDVMTLWk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"564.66479"	"1691.97983"	"1691.98064"	"-0.48"	"-0.00027"	"6/84"	"6"	"84"	"161125.822387695"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"89.6528"	"30941"	"30941"	"30925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"12.9"	""	"8.7"	""	"16.4"	"1.3"	"12.1"	"14.8"	""	"837"	"21"	"36.000"	"29.000"	"0.309524807611873"	"16"	"0.0002277"	"0.001129"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNFLFPIQAK"	"[R].gVNFLFPIQAk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"846.51379"	"1692.02031"	"1692.02488"	"-2.70"	"-0.00229"	"11/98"	"11"	"98"	"620457.477600098"	"HCD"	"MS2"	"30.42195"	"54.6"	"100.000"	"71.1737"	"23454"	"23454"	"23427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.7"	""	"77.2"	""	"72.2"	""	"86.4"	""	"99.5"	"106.4"	""	"592"	"16"	"34.000"	"27.000"	"0.822795127256749"	"15"	"0.0001889"	"0.0007164"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNFLFPIQAK"	"[R].gVNFLFPIQAk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"846.51563"	"1692.02397"	"1692.02488"	"-0.54"	"-0.00046"	"12/98"	"12"	"98"	"818366.852600098"	"HCD"	"MS2"	"14.66119"	"59.5"	"100.000"	"71.0961"	"23474"	"23474"	"23450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.8"	""	"76.0"	""	"77.2"	""	"98.0"	"1.0"	"112.9"	"121.1"	""	"571"	"11"	"34.000"	"27.000"	"2.41327110293263"	"13"	"0.0001889"	"0.0009245"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFESLVDFCK"	"[K].tFESLVDFck.[T]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"846.93964"	"1692.87200"	"1692.87412"	"-1.26"	"-0.00106"	"14/84"	"14"	"84"	"345850.975280762"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"84.0363"	"28742"	"28742"	"28725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.9"	""	"49.3"	""	"62.6"	""	"47.0"	""	"53.6"	"59.8"	""	"1014"	"46"	"37.000"	"30.000"	"0.001348987605318"	"25"	"0"	"0.0001267"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFESLVDFCK"	"[K].tFESLVDFck.[T]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"564.96259"	"1692.87320"	"1692.87412"	"-0.54"	"-0.00031"	"11/84"	"11"	"84"	"663516.628356934"	"HCD"	"MS2"	"12.01919"	"26.8"	"100.000"	"84.1583"	"28792"	"28792"	"28769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.9"	""	"40.4"	""	"46.5"	""	"37.2"	""	"42.3"	"49.6"	""	"1021"	"35"	"37.000"	"30.000"	"0.0159954236226311"	"15"	"0.0001308"	"0.0002256"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFESLVDFCK"	"[K].tFESLVDFck.[T]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"846.94049"	"1692.87370"	"1692.87412"	"-0.25"	"-0.00021"	"16/84"	"16"	"84"	"497710.799499512"	"HCD"	"MS2"	"3.479525"	"50.7"	"100.000"	"84.0459"	"28695"	"28695"	"28676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.7"	""	"83.4"	""	"84.0"	""	"58.7"	""	"77.4"	"93.5"	""	"1018"	"55"	"37.000"	"30.000"	"0.000178122090017434"	"19"	"0"	"7.286E-06"	"1.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFESLVDFCK"	"[K].tFESLVDFck.[T]"	"N-Term(TMT6plex); C9(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"564.96356"	"1692.87613"	"1692.87412"	"1.19"	"0.00067"	"11/84"	"11"	"84"	"654314.884033203"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"84.0620"	"28702"	"28702"	"28676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.1"	""	"32.3"	""	"41.6"	""	"38.4"	"1.7"	"41.6"	"47.9"	""	"1021"	"38"	"37.000"	"30.000"	"0.00783421969719041"	"25"	"0.0001308"	"0.0002579"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQAMK"	"[R].lIDDMVAQAMk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"564.98499"	"1692.94040"	"1692.94287"	"-1.46"	"-0.00082"	"8/88"	"8"	"88"	"3654892.54833984"	"HCD"	"MS2"	"34.90232"	"69.0"	"100.000"	"70.8931"	"23391"	"23391"	"23370"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.8"	""	"96.0"	""	"99.4"	""	"88.6"	"1.9"	"123.9"	"128.7"	""	"1089"	"16"	"37.000"	"30.000"	"1.47910118188288"	"18"	"0.0006037"	"0.003719"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQAMK"	"[R].lIDDMVAQAMk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"846.97443"	"1692.94158"	"1692.94287"	"-0.76"	"-0.00065"	"10/88"	"10"	"88"	"1550050.4987793"	"HCD"	"MS2"	"19.56664"	"123.2"	"100.000"	"70.6918"	"23257"	"23257"	"23235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.4"	""	"179.8"	""	"213.9"	""	"102.8"	"0.4"	"212.8"	"230.7"	""	"1080"	"70"	"37.000"	"30.000"	"5.15695996451575E-06"	"24"	"0"	"4.171E-06"	"1.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQAMK"	"[R].lIDDMVAQAMk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"846.97461"	"1692.94194"	"1692.94287"	"-0.55"	"-0.00046"	"7/88"	"7"	"88"	"572771.269470215"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"71.0214"	"23392"	"23392"	"23363"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.5"	""	"61.0"	""	"65.7"	""	"67.8"	""	"86.1"	"86.4"	""	"1075"	"22"	"37.000"	"30.000"	"0.349444708559411"	"17"	"0.0001889"	"0.0005707"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQAMK"	"[R].lIDDMVAQAMk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"564.98578"	"1692.94278"	"1692.94287"	"-0.05"	"-0.00003"	"8/88"	"8"	"88"	"3700904.48779297"	"HCD"	"MS2"	"8.04586"	"106.0"	"100.000"	"70.6526"	"23241"	"23241"	"23219"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.0"	""	"163.6"	""	"174.9"	""	"104.8"	"1.5"	"184.3"	"196.7"	""	"1074"	"39"	"37.000"	"30.000"	"0.00719406381147728"	"22"	"0"	"0.0001271"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQAMK"	"[R].lIDDMVAQAMk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"846.97510"	"1692.94292"	"1692.94287"	"0.03"	"0.00002"	"10/88"	"10"	"88"	"1606063.04748535"	"HCD"	"MS2"	"12.61903"	"132.3"	"100.000"	"70.6258"	"23282"	"23282"	"23258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"245.5"	""	"211.2"	""	"208.5"	""	"117.6"	"2.9"	"221.3"	"244.3"	""	"1081"	"72"	"37.000"	"30.000"	"3.19003683832881E-06"	"25"	"0"	"2.61E-06"	"1.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQAMK"	"[R].lIDDMVAQAMk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"564.98608"	"1692.94370"	"1692.94287"	"0.49"	"0.00028"	"8/88"	"8"	"88"	"4082818.7331543"	"HCD"	"MS2"	"3.956072"	"115.7"	"100.000"	"70.5820"	"23264"	"23264"	"23242"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.8"	""	"170.6"	""	"194.3"	""	"106.8"	""	"207.2"	"211.1"	""	"1076"	"42"	"37.000"	"30.000"	"0.0031899382462404"	"19"	"0"	"9.431E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSHFVEEFK"	"[R].lVSHFVEEFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"846.98907"	"1692.97087"	"1692.97251"	"-0.97"	"-0.00082"	"8/82"	"8"	"82"	"366909.645629883"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"55.2586"	"16967"	"16967"	"16939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.9"	""	"47.7"	""	"53.0"	""	"63.6"	""	"60.4"	"77.6"	""	"907"	"47"	"36.000"	"29.000"	"0.000815787960010905"	"20"	"0"	"5.555E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSHFVEEFK"	"[R].lVSHFVEEFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"846.98907"	"1692.97087"	"1692.97251"	"-0.97"	"-0.00082"	"10/82"	"10"	"82"	"303013.305480957"	"HCD"	"MS2"	"0"	"30.5"	"100.000"	"55.4599"	"17103"	"17103"	"17077"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.2"	""	"38.2"	""	"41.3"	""	"56.6"	"1.7"	"59.3"	"57.6"	""	"907"	"40"	"36.000"	"29.000"	"0.00470519136573468"	"19"	"0"	"0.0001416"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEPVYTSLGK"	"[K].qLEPVYTSLGk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.6721"	"0.0000"	"1"	"1"	"1"	"847.00031"	"1692.99333"	"1692.99364"	"-0.18"	"-0.00015"	"10/110"	"10"	"110"	"1291542.25036621"	"HCD"	"MS2"	"0"	"97.9"	"100.000"	"48.0042"	"14079"	"14079"	"14050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.5"	""	"107.7"	""	"120.5"	""	"158.1"	"4.0"	"187.8"	"181.1"	""	"776"	"61"	"35.000"	"28.000"	"3.4027631860373E-05"	""	"0"	"1.042E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAENEFVLLK"	"[R].tAAENEFVLLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"847.00043"	"1692.99358"	"1692.99364"	"-0.04"	"-0.00003"	"10/102"	"10"	"102"	"1321572.69262695"	"HCD"	"MS2"	"0"	"110.3"	"100.000"	"56.0857"	"17359"	"17359"	"17333"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.8"	""	"125.5"	""	"158.7"	""	"178.3"	""	"199.8"	"243.4"	""	"781"	"58"	"35.000"	"28.000"	"6.37706785652738E-05"	""	"0"	"6.525E-06"	"1.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAENEFVLLK"	"[R].tAAENEFVLLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.7759"	"0.0000"	"1"	"1"	"1"	"847.00067"	"1692.99407"	"1692.99364"	"0.25"	"0.00021"	"17/102"	"17"	"102"	"1277008.92449951"	"HCD"	"MS2"	"16.48631"	"119.3"	"100.000"	"55.9603"	"17254"	"17254"	"17227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.9"	""	"143.2"	""	"158.5"	""	"216.5"	""	"217.8"	"274.5"	""	"780"	"58"	"35.000"	"28.000"	"6.51725339581175E-05"	""	"0"	"6.498E-06"	"1.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEPVYTSLGK"	"[K].qLEPVYTSLGk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"847.00079"	"1692.99431"	"1692.99364"	"0.39"	"0.00033"	"10/110"	"10"	"110"	"1185277.76898193"	"HCD"	"MS2"	"0"	"93.5"	"100.000"	"47.7497"	"13927"	"13927"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.3"	""	"110.9"	""	"101.2"	""	"148.8"	"3.5"	"177.6"	"185.3"	""	"779"	"60"	"35.000"	"28.000"	"3.78885043661128E-05"	""	"0"	"6.349E-06"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSSLLYGSIPK"	"[R].gLSSLLYGSIPk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P32089"	"Tricarboxylate transport protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a1 PE=1 SV=1"	"P32089"	"Tricarboxylate transport protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a1 PE=1 SV=1"	"0"	"2"	"2"	"0.1143"	"0.0000"	"1"	"1"	"1"	"847.02380"	"1693.04033"	"1693.03003"	"6.09"	"0.00515"	"11/100"	"11"	"100"	"832385.49041748"	"HCD"	"MS2"	"0"	"64.4"	"100.000"	"67.5203"	"22014"	"22014"	"21994"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.8"	""	"99.1"	""	"107.7"	""	"100.6"	"3.8"	"100.9"	"108.0"	""	"458"	"35"	"33.000"	"26.000"	"0.00801374432494937"	""	"0.0001889"	"0.0006488"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQPYVGVFLK"	"[R].lAQPYVGVFLk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"847.02466"	"1693.04204"	"1693.04528"	"-1.92"	"-0.00162"	"10/98"	"10"	"98"	"773276.34588623"	"HCD"	"MS2"	"0"	"60.8"	"100.000"	"67.6395"	"22013"	"22013"	"21985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.4"	""	"94.8"	""	"105.2"	""	"96.0"	"1.3"	"98.6"	"104.2"	""	"449"	"19"	"33.000"	"26.000"	"0.258950256380835"	"24"	"0"	"0.0001585"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNWAHLDQLAALR"	"[R].gNWAHLDQLAALR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.31506"	"1693.93064"	"1693.93355"	"-1.72"	"-0.00097"	"14/118"	"14"	"118"	"7942609.81420898"	"HCD"	"MS2"	"22.50103"	"152.8"	"71.240"	"50.5164"	"15099"	"15099"	"15076"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.1"	""	"158.1"	""	"152.0"	""	"171.4"	""	"248.8"	"492.2"	""	"1059"	"17"	"37.000"	"30.000"	"1.06381464427632"	"14"	"0"	"9.188E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNWAHLDQLAALR"	"[R].gNWAHLDQLAALR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"565.31549"	"1693.93192"	"1693.93355"	"-0.96"	"-0.00054"	"10/118"	"10"	"118"	"8946035.33087158"	"HCD"	"MS2"	"11.4729"	"196.2"	"100.000"	"50.2678"	"14948"	"14948"	"14924"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"273.9"	""	"228.0"	""	"217.6"	""	"320.6"	"17.7"	"395.2"	"409.7"	""	"1049"	"29"	"37.000"	"30.000"	"0.0730710743144811"	"22"	"0"	"7.605E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNHFIAEFK"	"[R].mVNHFIAEFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"565.32104"	"1693.94858"	"1693.95000"	"-0.84"	"-0.00047"	"14/86"	"14"	"86"	"30129569.2414551"	"HCD"	"MS2"	"6.017545"	"574.8"	"68.877"	"51.8408"	"15590"	"15590"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"930.2"	""	"924.2"	""	"933.3"	""	"600.2"	"0.8"	"979.0"	"1070.6"	""	"1016"	"42"	"37.000"	"30.000"	"0.00298444591085127"	"18"	"0"	"4.569E-05"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNHFIAEFK"	"[R].mVNHFIAEFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.32117"	"1693.94895"	"1693.95000"	"-0.62"	"-0.00035"	"12/86"	"12"	"86"	"26415374.6938477"	"HCD"	"MS2"	"6.463781"	"215.7"	"26.540"	"52.1444"	"15715"	"15715"	"15698"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.2"	""	"312.7"	""	"342.5"	""	"249.0"	""	"385.7"	"421.5"	""	"1012"	"30"	"37.000"	"30.000"	"0.0510681960354802"	"14"	"0.0001889"	"0.0003783"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNHFIAEFK"	"[R].mVNHFIAEFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"565.32135"	"1693.94950"	"1693.95000"	"-0.30"	"-0.00017"	"11/86"	"11"	"86"	"16852254.2023315"	"HCD"	"MS2"	"8.717932"	"445.6"	"100.000"	"51.9992"	"15705"	"15705"	"15686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"732.5"	""	"683.0"	""	"707.2"	""	"499.8"	""	"753.5"	"843.9"	""	"1015"	"33"	"37.000"	"30.000"	"0.0254352521065841"	"16"	"0"	"6.017E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNHFIAEFK"	"[R].mVNHFIAEFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"847.47852"	"1693.94975"	"1693.95000"	"-0.15"	"-0.00012"	"9/86"	"9"	"86"	"2666282.88684082"	"HCD"	"MS2"	"35.49557"	"217.4"	"100.000"	"52.1026"	"15748"	"15748"	"15718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.3"	""	"254.0"	""	"258.4"	""	"338.3"	"2.9"	"423.7"	"497.2"	""	"1015"	"26"	"37.000"	"30.000"	"0.131351805444019"	"15"	"0"	"0.0001466"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNHFIAEFK"	"[R].mVNHFIAEFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.32153"	"1693.95005"	"1693.95000"	"0.02"	"0.00001"	"7/86"	"7"	"86"	"34336237.800293"	"HCD"	"MS2"	"6.017515"	"259.4"	"25.535"	"52.3056"	"15831"	"15831"	"15814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"377.1"	""	"402.8"	""	"423.9"	""	"290.5"	""	"465.4"	"497.7"	""	"1011"	"35"	"37.000"	"30.000"	"0.0166617709505705"	"15"	"0.0001308"	"0.0002075"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILVFGEDGSGK"	"[K].nILVFGEDGSGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"847.47925"	"1693.95122"	"1693.95251"	"-0.76"	"-0.00064"	"10/116"	"10"	"116"	"720850.541442871"	"HCD"	"MS2"	"0"	"65.3"	"100.000"	"52.6439"	"15969"	"15969"	"15942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.9"	""	"90.4"	""	"88.1"	""	"103.2"	""	"123.7"	"129.4"	""	"1006"	"61"	"37.000"	"30.000"	"3.99547102066313E-05"	"24"	"0"	"1.109E-05"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILVFGEDGSGK"	"[K].nILVFGEDGSGk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"847.47961"	"1693.95195"	"1693.95251"	"-0.33"	"-0.00028"	"11/116"	"11"	"116"	"726043.054321289"	"HCD"	"MS2"	"0"	"62.6"	"100.000"	"52.4410"	"15836"	"15836"	"15810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.9"	""	"83.8"	""	"92.7"	""	"107.5"	""	"106.5"	"125.2"	""	"1006"	"68"	"37.000"	"30.000"	"8.02727211060077E-06"	"24"	"0"	"5.949E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLVNSMNTVK"	"[R].vMLVNSMNTVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"847.49078"	"1693.97429"	"1693.97450"	"-0.13"	"-0.00011"	"10/98"	"10"	"98"	"6507507.5090332"	"HCD"	"MS2"	"2.503799"	"459.5"	"100.000"	"49.4811"	"14679"	"14679"	"14654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"780.7"	""	"882.0"	""	"834.7"	""	"363.9"	"3.1"	"685.4"	"789.0"	""	"904"	"75"	"36.000"	"29.000"	"1.28273940085558E-06"	"29"	"0"	"1.802E-05"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLVNSMNTVK"	"[R].vMLVNSMNTVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"565.32965"	"1693.97440"	"1693.97450"	"-0.06"	"-0.00004"	"13/98"	"13"	"98"	"17849031.9468994"	"HCD"	"MS2"	"18.79346"	"278.5"	"60.384"	"49.1925"	"14517"	"14517"	"14495"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"479.1"	""	"482.9"	""	"482.1"	""	"275.4"	"1.5"	"423.0"	"487.0"	""	"904"	"54"	"36.000"	"29.000"	"0.0001738354854845"	"20"	"0"	"9.769E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLVNSMNTVK"	"[R].vMLVNSMNTVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8219"	"0.0000"	"1"	"1"	"1"	"847.49115"	"1693.97502"	"1693.97450"	"0.31"	"0.00026"	"10/98"	"10"	"98"	"3059208.64422607"	"HCD"	"MS2"	"13.53303"	"229.1"	"100.000"	"49.1259"	"14490"	"14490"	"14463"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"415.4"	""	"443.8"	""	"407.0"	""	"198.1"	"0.9"	"329.1"	"367.8"	""	"901"	"73"	"36.000"	"29.000"	"2.26305336579836E-06"	""	"0"	"5.431E-06"	"1.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLVNSMNTVK"	"[R].vMLVNSMNTVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"565.33014"	"1693.97586"	"1693.97450"	"0.80"	"0.00045"	"13/98"	"13"	"98"	"18854697.7233887"	"HCD"	"MS2"	"18.79424"	"333.0"	"68.462"	"49.4834"	"14680"	"14680"	"14654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"597.6"	""	"607.7"	""	"554.0"	""	"328.5"	"6.2"	"496.0"	"554.4"	""	"896"	"49"	"36.000"	"29.000"	"0.000602945438617064"	"19"	"0"	"6.85E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPMITVDGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"565.33649"	"1693.99491"	"1693.99629"	"-0.81"	"-0.00046"	"11/84"	"11"	"84"	"7862297.980896"	"HCD"	"MS2"	"6.228421"	"208.1"	"100.000"	"64.4302"	"20762"	"20762"	"20739"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"378.7"	""	"358.5"	""	"376.1"	""	"197.3"	"2.1"	"311.7"	"340.2"	""	"785"	"44"	"35.000"	"28.000"	"0.00140229588974632"	"17"	"0"	"8.465E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPMITVDGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.50116"	"1693.99504"	"1693.99629"	"-0.73"	"-0.00062"	"9/84"	"9"	"84"	"2078208.14263916"	"HCD"	"MS2"	"0"	"129.1"	"100.000"	"64.3887"	"20745"	"20745"	"20723"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"256.0"	""	"228.2"	""	"218.6"	""	"115.6"	"1.5"	"191.6"	"206.3"	""	"785"	"56"	"35.000"	"28.000"	"9.85915424367511E-05"	"16"	"0"	"4.046E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPMITVDGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"565.33655"	"1693.99509"	"1693.99629"	"-0.71"	"-0.00040"	"11/84"	"11"	"84"	"5683505.69329834"	"HCD"	"MS2"	"0"	"158.6"	"100.000"	"64.3902"	"20693"	"20693"	"20665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"278.1"	""	"285.3"	""	"260.7"	""	"158.5"	""	"246.4"	"270.3"	""	"785"	"43"	"35.000"	"28.000"	"0.00209333946478892"	"17"	"0"	"5.35E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPMITVDGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.50122"	"1693.99516"	"1693.99629"	"-0.66"	"-0.00056"	"10/84"	"10"	"84"	"1515165.46673584"	"HCD"	"MS2"	"3.610127"	"93.4"	"100.000"	"64.6852"	"20813"	"20813"	"20793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.2"	""	"156.4"	""	"163.8"	""	"72.9"	"0.8"	"140.4"	"167.8"	""	"785"	"55"	"35.000"	"28.000"	"0.000134536356219482"	"16"	"0"	"2.545E-05"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPMITVDGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.50128"	"1693.99529"	"1693.99629"	"-0.59"	"-0.00050"	"10/84"	"10"	"84"	"1495573.01739502"	"HCD"	"MS2"	"4.476722"	"90.9"	"100.000"	"64.6928"	"20869"	"20869"	"20851"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.6"	""	"151.8"	""	"166.0"	""	"81.4"	""	"136.2"	"150.1"	""	"785"	"58"	"35.000"	"28.000"	"6.74279041959354E-05"	"16"	"0"	"2.201E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPMITVDGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.50208"	"1693.99687"	"1693.99629"	"0.35"	"0.00029"	"10/84"	"10"	"84"	"2370128.35766602"	"HCD"	"MS2"	"0"	"139.1"	"100.000"	"64.3879"	"20692"	"20692"	"20665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.1"	""	"244.2"	""	"240.5"	""	"130.0"	"0.4"	"194.6"	"236.0"	""	"786"	"60"	"35.000"	"28.000"	"3.82289658944347E-05"	"16"	"0"	"4.465E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLVNSMNTVK"	"[R].vMLVNSMnTVk.[E]"	"N-Term(TMT6plex); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"847.97003"	"1694.93279"	"1694.95852"	"-15.18"	"-0.01287"	"7/98"	"7"	"98"	"226919.08190918"	"HCD"	"MS2"	"100"	"20.8"	"100.000"	"50.4568"	"15075"	"15075"	"15048"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.4"	""	"28.6"	""	"28.4"	""	"26.3"	""	"44.5"	"38.8"	""	"1014"	"9"	"37.000"	"30.000"	"5.75450483545863"	"19"	"0.005102"	"0.1561"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLVNSMNTVK"	"[R].vMLVnSMNTVk.[E]"	"N-Term(TMT6plex); N5(Deamidated); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"2"	"2"	"847.97003"	"1694.93279"	"1694.95852"	"-15.18"	"-0.01287"	"7/98"	"7"	"98"	"226919.08190918"	"HCD"	"MS2"	"100"	"20.8"	"100.000"	"50.4568"	"15075"	"15075"	"15048"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.4"	""	"28.6"	""	"28.4"	""	"26.3"	""	"44.5"	"38.8"	""	"1014"	"9"	"37.000"	"30.000"	"6.79216080524949"	"19"	"0.005262"	"0.1599"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"847.97363"	"1694.93999"	"1694.94272"	"-1.61"	"-0.00137"	"9/108"	"9"	"108"	"471104.606201172"	"HCD"	"MS2"	"0"	"43.3"	"100.000"	"59.0435"	"18563"	"18563"	"18533"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.1"	""	"65.6"	""	"64.6"	""	"64.0"	""	"75.6"	"91.0"	""	"1003"	"35"	"37.000"	"30.000"	"0.0171898044953045"	"16"	"0"	"0.0001636"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.65179"	"1694.94083"	"1694.94272"	"-1.12"	"-0.00063"	"18/108"	"18"	"108"	"22504470.5645142"	"HCD"	"MS2"	"60.53386"	"145.5"	"100.000"	"57.7423"	"18036"	"18036"	"18005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"200.7"	""	"253.3"	""	"268.2"	""	"197.7"	"2.1"	"213.3"	"239.1"	""	"1000"	"54"	"36.000"	"30.000"	"0.000223341796075482"	"16"	"0"	"6.896E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9710"	"0.0000"	"1"	"1"	"1"	"847.97455"	"1694.94182"	"1694.94272"	"-0.53"	"-0.00045"	"11/108"	"11"	"108"	"10421024.9456787"	"HCD"	"MS2"	"0"	"489.2"	"100.000"	"57.7123"	"18023"	"18023"	"18005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"665.4"	""	"900.6"	""	"935.9"	""	"625.2"	"6.2"	"668.6"	"817.4"	""	"1014"	"69"	"37.000"	"30.000"	"6.03959698069879E-06"	"19"	"0"	"3.716E-06"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"847.97467"	"1694.94206"	"1694.94272"	"-0.39"	"-0.00033"	"11/108"	"11"	"108"	"598962.975463867"	"HCD"	"MS2"	"0"	"41.2"	"100.000"	"58.4541"	"18273"	"18273"	"18250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.6"	""	"70.0"	""	"76.8"	""	"52.3"	"1.7"	"63.8"	"71.8"	""	"1008"	"74"	"37.000"	"30.000"	"2.03437278055673E-06"	"19"	"0"	"6.958E-07"	"1.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"847.97504"	"1694.94280"	"1694.94272"	"0.04"	"0.00004"	"11/108"	"11"	"108"	"61407636.1582031"	"HCD"	"MS2"	"0"	"216.7"	"7.432"	"58.0210"	"18150"	"18150"	"18133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.7"	""	"373.9"	""	"417.6"	""	"266.4"	"0.1"	"301.0"	"389.4"	""	"1011"	"70"	"37.000"	"30.000"	"5.39164339281896E-06"	"19"	"0"	"4.57E-06"	"1.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"847.97504"	"1694.94280"	"1694.94272"	"0.04"	"0.00004"	"11/108"	"11"	"108"	"69416101.0942383"	"HCD"	"MS2"	"0"	"425.7"	"13.358"	"57.8150"	"18012"	"18012"	"17995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"585.7"	""	"752.5"	""	"803.3"	""	"515.3"	"3.4"	"600.6"	"761.0"	""	"1011"	"69"	"37.000"	"30.000"	"5.87112274296294E-06"	"20"	"0"	"5.791E-06"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.65265"	"1694.94339"	"1694.94272"	"0.40"	"0.00022"	"16/108"	"16"	"108"	"20981132.4055176"	"HCD"	"MS2"	"15.56433"	"134.9"	"100.000"	"57.5596"	"17907"	"17907"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.0"	""	"225.7"	""	"249.7"	""	"186.5"	"0.4"	"200.7"	"235.6"	""	"1011"	"54"	"37.000"	"30.000"	"0.000212188166407454"	"16"	"0"	"8.699E-06"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9559"	"0.0000"	"1"	"1"	"1"	"847.97534"	"1694.94341"	"1694.94272"	"0.40"	"0.00034"	"11/108"	"11"	"108"	"6631834.14794922"	"HCD"	"MS2"	"0"	"318.1"	"100.000"	"57.5114"	"17887"	"17887"	"17867"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"442.4"	""	"591.2"	""	"589.7"	""	"409.6"	"2.3"	"440.7"	"527.7"	""	"1011"	"68"	"37.000"	"30.000"	"8.01163508789093E-06"	"20"	"0"	"1.407E-06"	"1.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9701"	"0.0000"	"1"	"1"	"1"	"847.97540"	"1694.94353"	"1694.94272"	"0.48"	"0.00040"	"11/108"	"11"	"108"	"2297538.25463867"	"HCD"	"MS2"	"0"	"123.4"	"100.000"	"58.1397"	"18144"	"18144"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.1"	""	"215.1"	""	"234.7"	""	"161.8"	"0.4"	"179.6"	"210.5"	""	"1011"	"67"	"37.000"	"30.000"	"9.34805286893419E-06"	"18"	"0"	"1.318E-06"	"1.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9839"	"0.0000"	"1"	"1"	"1"	"847.97559"	"1694.94390"	"1694.94272"	"0.69"	"0.00059"	"11/108"	"11"	"108"	"416081.196655273"	"HCD"	"MS2"	"0"	"34.3"	"100.000"	"58.9197"	"18513"	"18513"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.1"	""	"49.3"	""	"54.5"	""	"55.9"	""	"58.1"	"65.4"	""	"1003"	"62"	"37.000"	"30.000"	"3.07093721449974E-05"	"18"	"0"	"5.139E-06"	"1.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"847.97571"	"1694.94414"	"1694.94272"	"0.84"	"0.00071"	"12/108"	"12"	"108"	"2146344.17675781"	"HCD"	"MS2"	"0"	"121.3"	"100.000"	"58.3384"	"18279"	"18279"	"18261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.0"	""	"237.3"	""	"226.8"	""	"152.0"	""	"187.9"	"206.9"	""	"1003"	"52"	"37.000"	"30.000"	"0.000328300041294738"	"18"	"0"	"2.021E-06"	"1.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQNAVLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"565.65302"	"1694.94449"	"1694.94272"	"1.04"	"0.00059"	"18/108"	"18"	"108"	"41954145.9812012"	"HCD"	"MS2"	"8.796103"	"77.6"	"19.348"	"57.8541"	"18028"	"18028"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.0"	""	"132.3"	""	"131.2"	""	"93.3"	"2.2"	"121.2"	"130.4"	""	"999"	"52"	"36.000"	"29.000"	"0.000346366190105276"	"17"	"0"	"2.476E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLVNSMNTVK"	"[R].vMLVnSMNTVk.[E]"	"N-Term(TMT6plex); N5(Deamidated); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"847.98279"	"1694.95830"	"1694.95852"	"-0.13"	"-0.00011"	"13/98"	"13"	"98"	"409330.18145752"	"HCD"	"MS2"	"0"	"40.2"	"100.000"	"51.0096"	"15301"	"15301"	"15270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.4"	""	"61.6"	""	"65.6"	""	"46.0"	""	"74.8"	"75.1"	""	"947"	"26"	"36.000"	"29.000"	"0.112802826874134"	"14"	"0"	"0.0001053"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPFDLFENK"	"[R].rAPFDLFENk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"4"	"4"	"0.8333"	"0.0000"	"1"	"1"	"1"	"424.49582"	"1694.96145"	"1694.96301"	"-0.92"	"-0.00039"	"6/96"	"6"	"96"	"983409.663208008"	"HCD"	"MS2"	"0"	"43.9"	"100.000"	"48.7739"	"14346"	"14346"	"14319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.2"	""	"46.1"	""	"74.2"	""	"68.9"	"1.8"	"88.0"	"80.2"	""	"906"	"6"	"36.000"	"29.000"	"10.3299495861619"	"14"	"0.00103"	"0.0114"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPFDLFENK"	"[R].rAPFDLFENk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"3"	"3"	"0.6333"	"0.0000"	"1"	"1"	"1"	"565.65881"	"1694.96189"	"1694.96301"	"-0.66"	"-0.00037"	"9/96"	"9"	"96"	"9363869.17797852"	"HCD"	"MS2"	"12.18526"	"242.6"	"62.410"	"49.1525"	"14548"	"14548"	"14527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"369.6"	""	"304.0"	""	"321.6"	""	"406.0"	""	"448.2"	"450.9"	""	"929"	"30"	"36.000"	"29.000"	"0.04518410854444"	"25"	"0"	"1.85E-05"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPFDLFENK"	"[R].rAPFDLFENk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"565.65887"	"1694.96207"	"1694.96301"	"-0.56"	"-0.00031"	"9/96"	"9"	"96"	"7748899.00915527"	"HCD"	"MS2"	"9.541509"	"264.8"	"89.357"	"48.8774"	"14388"	"14388"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"385.8"	""	"338.1"	""	"386.5"	""	"411.9"	""	"497.0"	"490.1"	""	"929"	"35"	"36.000"	"29.000"	"0.0162549530084672"	"25"	"0"	"2.226E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPFDLFENK"	"[R].rAPFDLFENk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"3"	"3"	"0.6216"	"0.0000"	"1"	"1"	"1"	"565.65887"	"1694.96207"	"1694.96301"	"-0.56"	"-0.00031"	"9/96"	"9"	"96"	"64670206.6311035"	"HCD"	"MS2"	"11.60323"	"545.9"	"24.971"	"48.8325"	"14417"	"14417"	"14399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"865.8"	""	"642.3"	""	"732.3"	""	"922.2"	""	"971.7"	"1037.7"	""	"929"	"37"	"36.000"	"29.000"	"0.0086096543907618"	"29"	"0"	"4.397E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPFDLFENK"	"[R].rAPFDLFENk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"3"	"3"	"0.6053"	"0.0000"	"1"	"1"	"1"	"565.65894"	"1694.96225"	"1694.96301"	"-0.45"	"-0.00025"	"9/96"	"9"	"96"	"83711820.8811035"	"HCD"	"MS2"	"12.18046"	"571.8"	"19.220"	"48.5577"	"14257"	"14257"	"14239"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"876.6"	""	"647.7"	""	"772.1"	""	"968.8"	""	"1065.8"	"1093.9"	""	"922"	"38"	"36.000"	"29.000"	"0.00742507637817182"	""	"0"	"3.895E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPFDLFENK"	"[R].rAPFDLFENk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"847.98529"	"1694.96330"	"1694.96301"	"0.17"	"0.00015"	"8/96"	"8"	"96"	"1089783.58544922"	"HCD"	"MS2"	"0"	"83.8"	"100.000"	"48.6589"	"14299"	"14299"	"14271"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.9"	""	"108.0"	""	"117.6"	""	"123.4"	""	"151.2"	"170.0"	""	"921"	"36"	"36.000"	"29.000"	"0.0126249490617279"	"26"	"0.0009404"	"0.009812"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPFDLFENK"	"[R].rAPFDLFENk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"847.98602"	"1694.96477"	"1694.96301"	"1.04"	"0.00088"	"8/96"	"8"	"96"	"1298928.73059082"	"HCD"	"MS2"	"0"	"98.5"	"100.000"	"48.9015"	"14446"	"14446"	"14415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.2"	""	"105.6"	""	"131.7"	""	"172.4"	""	"189.3"	"193.7"	""	"910"	"25"	"36.000"	"29.000"	"0.145885254264999"	"17"	"0.0006737"	"0.006492"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQIFNIEMK"	"[K].tLQIFNIEMk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"847.99872"	"1694.99016"	"1694.99153"	"-0.81"	"-0.00069"	"18/100"	"18"	"100"	"2522967.42706299"	"HCD"	"MS2"	"0"	"199.9"	"100.000"	"69.6032"	"22813"	"22813"	"22794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"284.0"	""	"285.2"	""	"286.8"	""	"211.3"	"0.7"	"382.8"	"445.9"	""	"773"	"63"	"35.000"	"28.000"	"2.01441755842114E-05"	""	"0"	"2.57E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQIFNIEMK"	"[K].tLQIFNIEMk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7705"	"0.0000"	"1"	"1"	"1"	"847.99908"	"1694.99089"	"1694.99153"	"-0.38"	"-0.00032"	"18/100"	"18"	"100"	"2123618.34112549"	"HCD"	"MS2"	"0"	"172.0"	"100.000"	"69.4473"	"22801"	"22801"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"233.0"	""	"269.5"	""	"242.2"	""	"177.2"	"0.8"	"313.1"	"395.6"	""	"783"	"61"	"35.000"	"28.000"	"3.24886575481896E-05"	""	"0"	"1.677E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQIFNIEMK"	"[K].tLQIFNIEMk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"565.66876"	"1694.99173"	"1694.99153"	"0.12"	"0.00007"	"13/100"	"13"	"100"	"5202517.42022705"	"HCD"	"MS2"	"30.44936"	"156.7"	"100.000"	"69.4519"	"22803"	"22803"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"217.2"	""	"220.6"	""	"221.9"	""	"202.0"	""	"286.9"	"339.3"	""	"777"	"41"	"35.000"	"28.000"	"0.00276306450054319"	"22"	"0"	"0.000141"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQIFNIEMK"	"[K].tLQIFNIEMk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"565.66895"	"1694.99228"	"1694.99153"	"0.44"	"0.00025"	"12/100"	"12"	"100"	"4855998.6071167"	"HCD"	"MS2"	"33.61604"	"146.6"	"100.000"	"69.5825"	"22805"	"22805"	"22778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.2"	""	"222.4"	""	"196.1"	""	"194.1"	""	"280.7"	"314.2"	""	"775"	"39"	"35.000"	"28.000"	"0.00544843415600341"	"22"	"0"	"7.335E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVIDVLHPGK"	"[K].qMVIDVLHPGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"565.67212"	"1695.00180"	"1695.00277"	"-0.57"	"-0.00032"	"9/100"	"9"	"100"	"5048350.85058594"	"HCD"	"MS2"	"9.553638"	"197.0"	"100.000"	"46.1721"	"13281"	"13281"	"13260"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.4"	""	"264.5"	""	"294.2"	""	"280.7"	"1.3"	"392.7"	"395.1"	""	"743"	"30"	"35.000"	"28.000"	"0.0365560125790261"	"21"	"0.0001859"	"0.0003598"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVIDVLHPGK"	"[K].qMVIDVLHPGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"3"	"3"	"0.7755"	"0.0000"	"1"	"1"	"1"	"565.67255"	"1695.00309"	"1695.00277"	"0.19"	"0.00011"	"8/100"	"8"	"100"	"6295768.38232422"	"HCD"	"MS2"	"14.91635"	"214.2"	"100.000"	"46.3949"	"13420"	"13420"	"13404"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.3"	""	"314.4"	""	"328.6"	""	"279.8"	"4.6"	"420.8"	"399.7"	""	"763"	"49"	"35.000"	"28.000"	"0.000446164017674081"	"26"	"0"	"3.621E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVELTNSLFK"	"[R].vSVELTNSLFk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.9718"	"0.0000"	"1"	"1"	"1"	"848.00726"	"1695.00725"	"1695.00929"	"-1.21"	"-0.00102"	"10/100"	"10"	"100"	"511053.818908691"	"HCD"	"MS2"	"12.12407"	"51.9"	"100.000"	"63.9524"	"20514"	"20514"	"20489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.3"	""	"66.1"	""	"73.9"	""	"89.5"	""	"96.6"	"107.3"	""	"706"	"71"	"35.000"	"28.000"	"2.79752969659606E-06"	"19"	"0"	"1.848E-06"	"1.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVELTNSLFK"	"[R].vSVELTNSLFk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.9863"	"0.0000"	"1"	"1"	"1"	"848.00745"	"1695.00762"	"1695.00929"	"-0.99"	"-0.00084"	"10/100"	"10"	"100"	"736632.155395508"	"HCD"	"MS2"	"32.57379"	"70.1"	"100.000"	"63.9369"	"20561"	"20561"	"20531"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.3"	""	"94.4"	""	"89.3"	""	"128.9"	""	"128.2"	"139.0"	""	"708"	"73"	"35.000"	"28.000"	"1.61809219123666E-06"	"18"	"0"	"3.183E-06"	"1.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVELTNSLFK"	"[R].vSVELTNSLFk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.67474"	"1695.00968"	"1695.00929"	"0.23"	"0.00013"	"13/100"	"13"	"100"	"2631187.89263916"	"HCD"	"MS2"	"25.63403"	"74.5"	"100.000"	"63.9201"	"20501"	"20501"	"20473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.8"	""	"87.5"	""	"100.6"	""	"133.2"	""	"145.4"	"161.3"	""	"678"	"40"	"35.000"	"28.000"	"0.00337442436482167"	"15"	"0.0001308"	"0.0002861"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVELTNSLFK"	"[R].vSVELTNSLFk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"565.67560"	"1695.01224"	"1695.00929"	"1.74"	"0.00098"	"8/100"	"8"	"100"	"2654003.40087891"	"HCD"	"MS2"	"11.99042"	"82.9"	"100.000"	"63.8978"	"20545"	"20545"	"20515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.3"	""	"106.9"	""	"115.7"	""	"152.5"	""	"162.5"	"157.2"	""	"662"	"37"	"35.000"	"28.000"	"0.00643914187017102"	"15"	"0"	"0.0001678"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQnAVLVR.[Y]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.0476"	"0.0000"	"1"	"1"	"1"	"848.46570"	"1695.92412"	"1695.92674"	"-1.54"	"-0.00131"	"11/108"	"11"	"108"	"891671.531433105"	"HCD"	"MS2"	"0"	"58.7"	"100.000"	"60.9521"	"19342"	"19342"	"19315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.2"	""	"88.0"	""	"101.8"	""	"76.6"	"0.3"	"104.3"	"116.2"	""	"1017"	"42"	"37.000"	"30.000"	"0.00312097979626298"	"17"	"0"	"1.026E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFqNAVLVR.[Y]"	"N-Term(TMT6plex); Q7(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	""	"0.0476"	"2"	"2"	"2"	"848.46570"	"1695.92412"	"1695.92674"	"-1.54"	"-0.00131"	"11/108"	"11"	"108"	"891671.531433105"	"HCD"	"MS2"	"0"	"58.7"	"100.000"	"60.9521"	"19342"	"19342"	"19315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.2"	""	"88.0"	""	"101.8"	""	"76.6"	"0.3"	"104.3"	"116.2"	""	"1017"	"40"	"37.000"	"30.000"	"0.0056531558332269"	"17"	"0"	"1.95E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQnAVLVR.[Y]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.1964"	"0.0000"	"1"	"1"	"1"	"848.46655"	"1695.92583"	"1695.92674"	"-0.54"	"-0.00045"	"12/108"	"12"	"108"	"756904.809082031"	"HCD"	"MS2"	"0"	"53.8"	"100.000"	"60.8486"	"19246"	"19246"	"19225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.8"	""	"83.0"	""	"85.5"	""	"73.4"	""	"96.1"	"110.4"	""	"1037"	"56"	"37.000"	"30.000"	"0.000120156912600866"	"20"	"0"	"1.166E-06"	"1.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQnAVLVR.[Y]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.1270"	"0.0000"	"1"	"1"	"1"	"848.46698"	"1695.92668"	"1695.92674"	"-0.03"	"-0.00003"	"10/108"	"10"	"108"	"1741433.21685791"	"HCD"	"MS2"	"29.31887"	"115.3"	"100.000"	"59.5632"	"18721"	"18721"	"18697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.0"	""	"163.9"	""	"191.2"	""	"146.5"	""	"192.4"	"232.8"	""	"1019"	"63"	"37.000"	"30.000"	"2.76149453659628E-05"	"24"	"0"	"3.684E-07"	"1.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQnAVLVR.[Y]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.1471"	"0.0000"	"1"	"1"	"1"	"848.46790"	"1695.92851"	"1695.92674"	"1.05"	"0.00089"	"6/108"	"6"	"108"	"914882.176818848"	"HCD"	"MS2"	"9.776937"	"60.6"	"100.000"	"59.7746"	"18861"	"18861"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.8"	""	"86.3"	""	"98.2"	""	"77.6"	"0.8"	"108.0"	"116.9"	""	"1009"	"34"	"37.000"	"30.000"	"0.0188304704607941"	"21"	"0"	"4.301E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLVNSMNTVK"	"[R].vMLVnSMnTVk.[E]"	"N-Term(TMT6plex); N5(Deamidated); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"848.48468"	"1695.96208"	"1695.94254"	"11.53"	"0.00977"	"13/98"	"13"	"98"	"483140.114013672"	"HCD"	"MS2"	"0"	"44.0"	"100.000"	"50.7311"	"15137"	"15137"	"15106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.6"	""	"66.6"	""	"67.8"	""	"51.7"	""	"79.5"	"81.2"	""	"846"	"19"	"36.000"	"29.000"	"0.530078717000219"	"14"	"0.005102"	"0.1551"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIPAANTGESK"	"[K].hLIPAANTGESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.99725"	"1695.97721"	"1695.97939"	"-1.29"	"-0.00073"	"13/104"	"13"	"104"	"13976526.4415894"	"HCD"	"MS2"	"8.915526"	"330.2"	"100.000"	"30.3097"	"6818"	"6818"	"6794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"440.4"	""	"344.2"	""	"417.6"	""	"602.9"	"0.2"	"640.7"	"687.5"	""	"786"	"56"	"35.000"	"28.000"	"0.00010949456192715"	"16"	"0"	"2.088E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIPAANTGESK"	"[K].hLIPAANTGESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.99792"	"1695.97922"	"1695.97939"	"-0.10"	"-0.00006"	"13/104"	"13"	"104"	"10027971.2180786"	"HCD"	"MS2"	"10.96034"	"293.1"	"100.000"	"30.3581"	"6879"	"6879"	"6854"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.7"	""	"311.2"	""	"375.7"	""	"545.4"	""	"588.8"	"596.9"	""	"791"	"39"	"35.000"	"28.000"	"0.00489944049972761"	"15"	"0"	"3.653E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIPAANTGESK"	"[K].hLIPAANTGESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.99805"	"1695.97959"	"1695.97939"	"0.12"	"0.00007"	"7/104"	"7"	"104"	"2663906.25012207"	"HCD"	"MS2"	"11.40063"	"113.7"	"100.000"	"30.6996"	"7019"	"7019"	"6992"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.8"	""	"145.5"	""	"153.3"	""	"186.0"	"9.6"	"214.1"	"222.9"	""	"791"	"5"	"35.000"	"28.000"	"13.3090325688007"	"13"	"0.0003571"	"0.001529"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYLPFLNTLK"	"[K].eYLPFLNTLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"848.50641"	"1696.00554"	"1696.00856"	"-1.78"	"-0.00151"	"11/92"	"11"	"92"	"424185.00012207"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"73.4361"	"24430"	"24430"	"24399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.6"	""	"44.4"	""	"48.8"	"1.9"	"55.9"	""	"58.2"	"51.2"	""	"620"	"31"	"34.000"	"27.000"	"0.0246241752764527"	"21"	"0.0001889"	"0.0003928"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYLPFLNTLK"	"[K].eYLPFLNTLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"848.50684"	"1696.00640"	"1696.00856"	"-1.28"	"-0.00108"	"12/92"	"12"	"92"	"343519.505065918"	"HCD"	"MS2"	"25.74041"	"27.2"	"100.000"	"73.4059"	"24366"	"24366"	"24337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.4"	""	"38.5"	""	"39.1"	""	"49.0"	"1.1"	"45.4"	"44.0"	""	"615"	"28"	"34.000"	"27.000"	"0.0518615055307038"	"18"	"0.0001889"	"0.0005839"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFQVIYNVK"	"[K].dLFQVIYNVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"566.33844"	"1697.00077"	"1697.00381"	"-1.80"	"-0.00102"	"10/84"	"10"	"84"	"932755.775390625"	"HCD"	"MS2"	"12.68906"	"35.5"	"100.000"	"75.7897"	"25338"	"25338"	"25313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.7"	""	"44.5"	""	"53.1"	""	"59.6"	""	"73.2"	"63.3"	""	"603"	"13"	"34.000"	"27.000"	"1.48691901892413"	"14"	"0.0001889"	"0.000531"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFQVIYNVK"	"[K].dLFQVIYNVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.00446"	"1697.00163"	"1697.00381"	"-1.28"	"-0.00109"	"6/84"	"6"	"84"	"364393.503173828"	"HCD"	"MS2"	"0"	"31.5"	"100.000"	"75.6711"	"25342"	"25342"	"25311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.9"	""	"43.3"	""	"48.4"	""	"48.6"	""	"54.4"	"59.6"	""	"604"	"5"	"34.000"	"27.000"	"10.4233409279429"	"13"	"0.001587"	"0.02126"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSSAMSAAK"	"[R].kLSSAmSAAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"566.34515"	"1697.02091"	"1697.02345"	"-1.50"	"-0.00085"	"13/98"	"13"	"98"	"4139085.68218994"	"HCD"	"MS2"	"12.62707"	"207.1"	"100.000"	"27.4138"	"5711"	"5711"	"5682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.6"	""	"233.6"	""	"265.2"	""	"528.0"	""	"329.8"	"317.4"	""	"467"	"27"	"33.000"	"26.000"	"0.0427845417623678"	"14"	"0.000523"	"0.003232"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSSAMSAAK"	"[R].kLSSAmSAAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"566.34528"	"1697.02127"	"1697.02345"	"-1.28"	"-0.00073"	"15/98"	"15"	"98"	"2056684.06555176"	"HCD"	"MS2"	"6.676836"	"119.6"	"100.000"	"27.4403"	"5687"	"5687"	"5660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.8"	""	"175.2"	""	"172.3"	""	"212.9"	"2.6"	"192.6"	"176.7"	""	"465"	"7"	"33.000"	"26.000"	"4.92518963945277"	"13"	"0.005323"	"0.1638"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSSAMSAAK"	"[R].kLSSAmSAAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"849.01477"	"1697.02226"	"1697.02345"	"-0.70"	"-0.00059"	"7/98"	"7"	"98"	"283798.277526855"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"27.4507"	"5726"	"5726"	"5698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.3"	""	"23.9"	""	"29.6"	""	"50.8"	""	"42.1"	"36.1"	""	"464"	"21"	"33.000"	"26.000"	"0.205820194792807"	"16"	"0.008371"	"0.3527"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THIETVINALK"	"[K].tHIETVINALk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"566.35028"	"1697.03629"	"1697.03618"	"0.07"	"0.00004"	"10/94"	"10"	"94"	"5642582.31402588"	"HCD"	"MS2"	"27.55753"	"183.8"	"99.187"	"47.1517"	"13682"	"13682"	"13656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"225.7"	""	"231.4"	""	"245.8"	""	"325.7"	""	"384.6"	"332.0"	""	"369"	"32"	"32.000"	"25.000"	"0.0107398043678726"	"18"	"0"	"0.0001145"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEVFGQFQGK"	"[R].sIEVFGQFQGk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"3"	"566.65863"	"1697.96134"	"1697.96268"	"-0.79"	"-0.00045"	"7/92"	"7"	"92"	"9501270.16607666"	"HCD"	"MS2"	"24.24801"	"257.2"	"100.000"	"54.9897"	"16857"	"16857"	"16828"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"366.8"	""	"420.6"	""	"380.1"	""	"412.8"	"0.2"	"424.2"	"427.9"	""	"891"	"7"	"36.000"	"29.000"	"9.904845562852"	"15"	"0.0006737"	"0.006424"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPDDVLQLVK"	"[R].nVPDDVLQLVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"849.51184"	"1698.01641"	"1698.02019"	"-2.23"	"-0.00189"	"10/102"	"10"	"102"	"2994467.32843018"	"HCD"	"MS2"	"0"	"172.7"	"100.000"	"65.7509"	"21301"	"21301"	"21283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.1"	""	"108.1"	""	"97.4"	""	"402.6"	"0.6"	"457.2"	"471.5"	""	"472"	"76"	"33.000"	"26.000"	"5.43140268908409E-07"	"19"	"0"	"1.173E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPDDVLQLVK"	"[R].nVPDDVLQLVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.8987"	"0.0000"	"1"	"1"	"1"	"849.51270"	"1698.01811"	"1698.02019"	"-1.22"	"-0.00104"	"10/102"	"10"	"102"	"2914544.37512207"	"HCD"	"MS2"	"0"	"178.3"	"100.000"	"65.8217"	"21277"	"21277"	"21257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.0"	""	"121.3"	""	"105.9"	""	"357.8"	"1.8"	"496.2"	"482.8"	""	"482"	"79"	"33.000"	"26.000"	"3.3038250564573E-07"	"25"	"0"	"1.178E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPDDVLQLVK"	"[R].nVPDDVLQLVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.9367"	"0.0000"	"1"	"1"	"1"	"849.51306"	"1698.01885"	"1698.02019"	"-0.79"	"-0.00067"	"10/102"	"10"	"102"	"2218758.77929688"	"HCD"	"MS2"	"0"	"133.1"	"100.000"	"65.4559"	"21181"	"21181"	"21155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.1"	""	"102.1"	""	"76.7"	""	"288.5"	"2.6"	"342.8"	"354.8"	""	"482"	"79"	"33.000"	"26.000"	"3.296226469686E-07"	"23"	"0"	"1.064E-05"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPDDVLQLVK"	"[R].nVPDDVLQLVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"849.51355"	"1698.01982"	"1698.02019"	"-0.22"	"-0.00018"	"10/102"	"10"	"102"	"1830739.72009277"	"HCD"	"MS2"	"0"	"115.2"	"100.000"	"65.5147"	"21152"	"21152"	"21129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.1"	""	"80.7"	""	"71.8"	""	"262.2"	"0.7"	"306.5"	"293.6"	""	"476"	"72"	"33.000"	"26.000"	"1.64655771078707E-06"	"25"	"0"	"1.376E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPDDVLQLVK"	"[R].nVPDDVLQLVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"566.67822"	"1698.02011"	"1698.02019"	"-0.05"	"-0.00003"	"9/102"	"9"	"102"	"2221966.00823975"	"HCD"	"MS2"	"3.370919"	"69.4"	"100.000"	"65.8731"	"21351"	"21351"	"21331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.6"	""	"57.0"	""	"56.4"	""	"132.3"	""	"184.4"	"164.7"	""	"454"	"25"	"33.000"	"26.000"	"0.0662255932178265"	"24"	"0.0001889"	"0.0009336"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLmAFTNLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"849.97772"	"1698.94817"	"1698.95006"	"-1.12"	"-0.00095"	"9/98"	"9"	"98"	"3477019.90600586"	"HCD"	"MS2"	"11.23048"	"242.0"	"100.000"	"52.2802"	"15820"	"15820"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"369.6"	""	"295.4"	""	"296.5"	""	"737.9"	""	"280.4"	"302.2"	""	"875"	"56"	"36.000"	"29.000"	"0.000118026100169465"	"22"	"0"	"0.0001292"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLmAFTNLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"566.98767"	"1698.94846"	"1698.95006"	"-0.94"	"-0.00053"	"13/98"	"13"	"98"	"16947213.430481"	"HCD"	"MS2"	"28.31132"	"337.7"	"63.339"	"52.1511"	"15717"	"15717"	"15698"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"457.8"	""	"426.5"	""	"405.5"	""	"792.4"	"5.7"	"532.5"	"575.2"	""	"875"	"23"	"36.000"	"29.000"	"0.196778686515813"	"20"	"0.0001308"	"0.0002203"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLmAFTNLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"566.98785"	"1698.94901"	"1698.95006"	"-0.62"	"-0.00035"	"7/98"	"7"	"98"	"1335776.90447998"	"HCD"	"MS2"	"13.62259"	"59.5"	"100.000"	"61.6530"	"19575"	"19575"	"19545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.1"	""	"84.2"	""	"89.6"	""	"87.5"	"0.6"	"90.0"	"106.4"	""	"874"	"6"	"36.000"	"29.000"	"10.7024063668615"	"17"	"0.002953"	"0.05307"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLmAFTNLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"849.97852"	"1698.94975"	"1698.95006"	"-0.18"	"-0.00015"	"9/98"	"9"	"98"	"2151931.48687744"	"HCD"	"MS2"	"0"	"161.9"	"100.000"	"52.5861"	"15945"	"15945"	"15926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.3"	""	"195.1"	""	"189.1"	""	"517.1"	"4.8"	"172.9"	"175.9"	""	"877"	"53"	"36.000"	"29.000"	"0.000245453708255606"	"21"	"0.0001889"	"0.0005345"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLmAFTNLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"566.98816"	"1698.94992"	"1698.95006"	"-0.08"	"-0.00005"	"12/98"	"12"	"98"	"5833188.39569092"	"HCD"	"MS2"	"9.582225"	"183.9"	"100.000"	"52.4639"	"15845"	"15845"	"15826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"305.1"	""	"272.3"	""	"258.5"	""	"420.2"	"6.3"	"223.4"	"248.4"	""	"877"	"33"	"36.000"	"29.000"	"0.0236575407972884"	"22"	"0.0001859"	"0.0003535"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLmAFTNLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"566.98816"	"1698.94992"	"1698.95006"	"-0.08"	"-0.00005"	"11/98"	"11"	"98"	"12843537.9249268"	"HCD"	"MS2"	"4.870979"	"241.5"	"63.184"	"52.4737"	"15899"	"15899"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.8"	""	"325.8"	""	"300.6"	""	"598.9"	"16.1"	"349.5"	"347.2"	""	"877"	"21"	"36.000"	"29.000"	"0.377545760332948"	"20"	"0.0001859"	"0.0003377"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLmAFTNLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"849.97876"	"1698.95024"	"1698.95006"	"0.11"	"0.00009"	"9/98"	"9"	"98"	"2627932.84338379"	"HCD"	"MS2"	"3.823655"	"192.4"	"100.000"	"52.3535"	"15800"	"15800"	"15778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.6"	""	"214.1"	""	"221.1"	""	"614.2"	""	"219.3"	"235.5"	""	"876"	"56"	"36.000"	"29.000"	"0.000117889224411999"	"18"	"0.0001889"	"0.0004222"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGLMAFTNLK"	"[R].eTGLmAFTNLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"849.97931"	"1698.95134"	"1698.95006"	"0.75"	"0.00064"	"9/98"	"9"	"98"	"2992363.86804199"	"HCD"	"MS2"	"28.47197"	"218.6"	"100.000"	"52.0545"	"15678"	"15678"	"15650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"323.9"	""	"297.5"	""	"245.7"	""	"659.6"	""	"245.1"	"292.5"	""	"865"	"52"	"36.000"	"29.000"	"0.000283782827676007"	"23"	"0.0001859"	"0.0003157"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEIIQTLQMK"	"[R].hEIIQTLQMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"567.00336"	"1698.99552"	"1698.99768"	"-1.27"	"-0.00072"	"10/90"	"10"	"90"	"23445434.2282715"	"HCD"	"MS2"	"6.935578"	"562.9"	"68.196"	"39.9156"	"10784"	"10784"	"10765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"795.6"	""	"778.7"	""	"852.2"	""	"841.3"	""	"1043.3"	"1023.5"	""	"623"	"28"	"34.000"	"27.000"	"0.0488042958338689"	"21"	"0.0001308"	"0.0002614"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEIIQTLQMK"	"[R].hEIIQTLQMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"567.00342"	"1698.99570"	"1698.99768"	"-1.17"	"-0.00066"	"11/90"	"11"	"90"	"43400212.5146484"	"HCD"	"MS2"	"22.43894"	"360.7"	"26.678"	"39.8495"	"10716"	"10716"	"10693"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"519.5"	""	"484.8"	""	"533.2"	""	"527.6"	""	"650.8"	"702.7"	""	"623"	"38"	"34.000"	"27.000"	"0.00546333776323709"	"19"	"0"	"0.0001603"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEIIQTLQMK"	"[R].hEIIQTLQMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"850.00183"	"1698.99639"	"1698.99768"	"-0.76"	"-0.00065"	"9/90"	"9"	"90"	"1511943.81427002"	"HCD"	"MS2"	"0"	"119.0"	"100.000"	"39.8266"	"10707"	"10707"	"10677"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.6"	""	"166.0"	""	"193.0"	""	"156.1"	"1.1"	"185.7"	"218.9"	""	"622"	"65"	"34.000"	"27.000"	"9.05233023718714E-06"	""	"0"	"1.134E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEIIQTLQMK"	"[R].hEIIQTLQMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"850.00226"	"1698.99724"	"1698.99768"	"-0.26"	"-0.00022"	"8/90"	"8"	"90"	"1339103.3348999"	"HCD"	"MS2"	"0"	"115.6"	"100.000"	"40.0187"	"10827"	"10827"	"10797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.8"	""	"181.3"	""	"183.6"	""	"156.6"	"0.1"	"195.2"	"197.6"	""	"611"	"41"	"34.000"	"27.000"	"0.00228040095694275"	"23"	"0"	"6.642E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSPALGVVFLNAR"	"[R].lLSPALGVVFLNAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5W1"	"Microtubule-associated protein 1S OS=Rattus norvegicus OX=10116 GN=Map1s PE=1 SV=1"	"P0C5W1"	"Microtubule-associated protein 1S OS=Rattus norvegicus OX=10116 GN=Map1s PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"850.02521"	"1699.04314"	"1699.04679"	"-2.15"	"-0.00183"	"4/108"	"4"	"108"	"130109.616149902"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"83.1013"	"28361"	"28361"	"28333"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	"13.8"	""	"14.6"	""	"12.1"	""	"12.8"	"14.5"	""	"353"	"10"	"32.000"	"25.000"	"1.6023032357645"	"17"	"0.003197"	"0.06643"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IANLLKPDK"	"[K].iANLLkPDk.[E]"	"N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.04041"	"1699.10666"	"1699.10850"	"-1.08"	"-0.00061"	"11/76"	"11"	"76"	"8781733.52264404"	"HCD"	"MS2"	"0"	"467.0"	"100.000"	"44.8370"	"12788"	"12788"	"12771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"505.8"	""	"481.9"	""	"548.4"	""	"855.1"	""	"919.4"	"1132.4"	""	"127"	"9"	"28.000"	"21.000"	"0.772278110410444"	"13"	"0.0001308"	"0.0003107"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IANLLKPDK"	"[K].iANLLkPDk.[E]"	"N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"P02696"	"Retinol-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Rbp1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.04047"	"1699.10685"	"1699.10850"	"-0.98"	"-0.00055"	"4/76"	"4"	"76"	"9858356.31781006"	"HCD"	"MS2"	"12.31478"	"528.0"	"100.000"	"44.6165"	"12649"	"12649"	"12630"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"516.3"	""	"538.6"	""	"638.7"	""	"952.2"	""	"1064.1"	"1317.6"	""	"127"	"11"	"28.000"	"21.000"	"0.530607916576842"	"13"	"0.0001859"	"0.0003253"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMLYTPQEMK"	"[R].tMLYTPQEMk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"850.46191"	"1699.91655"	"1699.91632"	"0.14"	"0.00012"	"11/92"	"11"	"92"	"456070.912231445"	"HCD"	"MS2"	"0"	"45.0"	"100.000"	"45.1269"	"12858"	"12858"	"12832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.5"	""	"57.6"	""	"61.5"	""	"61.1"	"0.3"	"91.7"	"89.7"	""	"946"	"30"	"36.000"	"29.000"	"0.0441429284276976"	"18"	"0.0001889"	"0.0004889"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEGLAGALATVLGGK"	"[M].aTEGLAGALATVLGGk.[G]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"1"	"1"	"Q641Y7"	"8-oxo-dGDP phosphatase NUDT18 OS=Rattus norvegicus OX=10116 GN=Nudt18 PE=2 SV=2"	"Q641Y7"	"8-oxo-dGDP phosphatase NUDT18 OS=Rattus norvegicus OX=10116 GN=Nudt18 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.49249"	"1699.97771"	"1699.97917"	"-0.86"	"-0.00073"	"10/138"	"10"	"138"	"115769.404846191"	"HCD"	"MS2"	"13.43525"	"2.6"	"100.000"	"101.6818"	"34549"	"34549"	"34545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"4.5"	""	"4.0"	""	"6.5"	""	"5.5"	"4.6"	""	"838"	"36"	"36.000"	"29.000"	"0.0109954756967808"	"15"	"0.0001889"	"0.0005387"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEGLAGALATVLGGK"	"[M].aTEGLAGALATVLGGk.[G]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"1"	"1"	"Q641Y7"	"8-oxo-dGDP phosphatase NUDT18 OS=Rattus norvegicus OX=10116 GN=Nudt18 PE=2 SV=2"	"Q641Y7"	"8-oxo-dGDP phosphatase NUDT18 OS=Rattus norvegicus OX=10116 GN=Nudt18 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.49255"	"1699.97783"	"1699.97917"	"-0.79"	"-0.00067"	"8/138"	"8"	"138"	"80751.7301025391"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"101.8715"	"34602"	"34602"	"34596"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.5"	""	"2.8"	""	"3.2"	""	"3.0"	""	"3.7"	"2.8"	""	"836"	"20"	"36.000"	"29.000"	"0.396438917659775"	"14"	"0.0002277"	"0.001331"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STFVLDEFKR"	"[K].sTFVLDEFkR.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.33087"	"1699.97806"	"1699.97833"	"-0.16"	"-0.00009"	"7/86"	"7"	"86"	"20949444.1762695"	"HCD"	"MS2"	"12.72905"	"648.5"	"60.342"	"47.5591"	"13849"	"13849"	"13832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"983.1"	""	"896.7"	""	"958.0"	""	"1036.8"	""	"1112.3"	"1153.0"	""	"839"	"16"	"36.000"	"29.000"	"1.13170169191065"	"13"	"0.0001859"	"0.0003609"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STFVLDEFKR"	"[K].sTFVLDEFkR.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.33093"	"1699.97824"	"1699.97833"	"-0.05"	"-0.00003"	"7/86"	"7"	"86"	"24831298.4672852"	"HCD"	"MS2"	"9.112308"	"642.7"	"53.102"	"47.8182"	"14003"	"14003"	"13986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"982.1"	""	"904.8"	""	"967.3"	""	"1039.8"	"3.7"	"1089.4"	"1093.5"	""	"826"	"17"	"36.000"	"29.000"	"0.777947073959287"	"14"	"0.0001889"	"0.0003761"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPASALLGEENK"	"[R].lPASALLGEENk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"567.33771"	"1699.99857"	"1699.99946"	"-0.52"	"-0.00030"	"12/102"	"12"	"102"	"13494355.1330566"	"HCD"	"MS2"	"25.1841"	"281.1"	"66.767"	"51.7671"	"15610"	"15610"	"15590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"422.2"	""	"375.1"	""	"380.4"	""	"420.1"	""	"551.4"	"520.5"	""	"670"	"40"	"35.000"	"28.000"	"0.00350788063597051"	"22"	"0"	"0.0001316"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPASALLGEENK"	"[R].lPASALLGEENk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"567.33771"	"1699.99857"	"1699.99946"	"-0.52"	"-0.00030"	"12/102"	"12"	"102"	"13229797.6060181"	"HCD"	"MS2"	"27.50583"	"296.7"	"77.437"	"51.5253"	"15461"	"15461"	"15442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.7"	""	"377.5"	""	"380.2"	""	"468.2"	""	"582.9"	"570.3"	""	"670"	"40"	"35.000"	"28.000"	"0.00341228114998129"	"20"	"0"	"0.0001618"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPASALLGEENK"	"[R].lPASALLGEENk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.8806"	"0.0000"	"1"	"1"	"1"	"850.50311"	"1699.99895"	"1699.99946"	"-0.30"	"-0.00025"	"11/102"	"11"	"102"	"2489069.22473145"	"HCD"	"MS2"	"5.93338"	"155.5"	"100.000"	"51.5070"	"15454"	"15454"	"15426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.5"	""	"201.7"	""	"212.4"	""	"219.8"	"0.5"	"271.5"	"261.1"	""	"670"	"67"	"35.000"	"28.000"	"6.38329340517687E-06"	"25"	"0"	"2.415E-06"	"1.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPASALLGEENK"	"[R].lPASALLGEENk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"850.50336"	"1699.99944"	"1699.99946"	"-0.01"	"-0.00001"	"11/102"	"11"	"102"	"2572368.09051514"	"HCD"	"MS2"	"5.410586"	"158.0"	"100.000"	"51.7228"	"15592"	"15592"	"15574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.4"	""	"201.9"	""	"214.3"	""	"217.1"	""	"281.2"	"277.5"	""	"655"	"72"	"35.000"	"28.000"	"2.1145176000885E-06"	"26"	"0"	"4.354E-06"	"1.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KELNYFAK"	"[K].kELNYFAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"567.34949"	"1700.03391"	"1700.03500"	"-0.64"	"-0.00036"	"6/70"	"6"	"70"	"14574703.0385742"	"HCD"	"MS2"	"10.83255"	"784.8"	"90.912"	"39.2653"	"10476"	"10476"	"10454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1513.6"	""	"1183.9"	""	"1072.9"	""	"909.4"	""	"1295.4"	"1448.8"	""	"458"	"21"	"33.000"	"26.000"	"0.175321622982678"	"20"	"0.0001308"	"0.0002907"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KELNYFAK"	"[K].kELNYFAk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"567.34967"	"1700.03446"	"1700.03500"	"-0.32"	"-0.00018"	"6/70"	"6"	"70"	"17405539.3769531"	"HCD"	"MS2"	"6.345626"	"476.7"	"43.459"	"39.3725"	"10563"	"10563"	"10542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"888.0"	""	"722.1"	""	"675.5"	""	"579.3"	""	"777.1"	"871.4"	""	"457"	"20"	"33.000"	"26.000"	"0.247107657871579"	"18"	"0.0001308"	"0.0002703"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLANMVYQYK"	"[K].lLANMVYQYk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"850.99402"	"1700.98076"	"1700.98097"	"-0.12"	"-0.00010"	"11/86"	"11"	"86"	"756626.737731934"	"HCD"	"MS2"	"19.05701"	"68.8"	"100.000"	"64.2826"	"20702"	"20702"	"20675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.2"	""	"115.1"	""	"119.0"	""	"81.6"	"3.2"	"110.2"	"113.0"	""	"831"	"45"	"36.000"	"29.000"	"0.00124902470374203"	"25"	"0"	"3.219E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLANMVYQYK"	"[K].lLANMVYQYk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"850.99408"	"1700.98088"	"1700.98097"	"-0.05"	"-0.00004"	"16/86"	"16"	"86"	"691932.549987793"	"HCD"	"MS2"	"12.7763"	"67.5"	"100.000"	"64.2520"	"20636"	"20636"	"20617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.0"	""	"97.0"	""	"121.7"	""	"73.0"	"2.3"	"112.2"	"124.7"	""	"837"	"47"	"36.000"	"29.000"	"0.000806669176170406"	"22"	"0"	"2.839E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEDVIAQGVGK"	"[K].nIEDVIAQGVGk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02401"	"60S acidic ribosomal protein P2 OS=Rattus norvegicus OX=10116 GN=Rplp2 PE=1 SV=2"	"P02401"	"60S acidic ribosomal protein P2 OS=Rattus norvegicus OX=10116 GN=Rplp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"851.00195"	"1700.99663"	"1700.99471"	"1.13"	"0.00096"	"20/112"	"20"	"112"	"632438.506408691"	"HCD"	"MS2"	"0"	"53.2"	"100.000"	"58.2901"	"18260"	"18260"	"18229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.9"	""	"61.8"	""	"74.4"	""	"89.4"	"0.8"	"97.9"	"106.7"	""	"724"	"69"	"35.000"	"28.000"	"4.38236524345275E-06"	""	"0"	"3.905E-06"	"1.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMEELIPLVNK"	"[R].gMEELIPLVNk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"851.00262"	"1700.99797"	"1701.00210"	"-2.43"	"-0.00206"	"15/84"	"15"	"84"	"1871241.42578125"	"HCD"	"MS2"	"23.41452"	"127.2"	"100.000"	"66.0021"	"21404"	"21404"	"21379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.5"	""	"189.8"	""	"189.5"	""	"154.1"	""	"233.1"	"258.1"	""	"731"	"36"	"35.000"	"28.000"	"0.0100204535983964"	"15"	"0.0001308"	"0.0002238"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMEELIPLVNK"	"[R].gMEELIPLVNk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"567.67145"	"1700.99979"	"1701.00210"	"-1.36"	"-0.00077"	"11/84"	"11"	"84"	"6631625.75006104"	"HCD"	"MS2"	"16.3101"	"150.5"	"100.000"	"65.9880"	"21398"	"21398"	"21379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.2"	""	"216.8"	""	"204.5"	""	"168.7"	"2.2"	"297.2"	"308.7"	""	"716"	"36"	"35.000"	"28.000"	"0.00843107643634771"	"21"	"0"	"7.313E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMEELIPLVNK"	"[R].gMEELIPLVNk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"851.00378"	"1701.00029"	"1701.00210"	"-1.06"	"-0.00090"	"12/84"	"12"	"84"	"499307.152160645"	"HCD"	"MS2"	"29.56"	"37.6"	"100.000"	"66.3861"	"21508"	"21508"	"21481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.0"	""	"53.8"	""	"58.7"	""	"45.7"	""	"74.6"	"63.9"	""	"714"	"25"	"35.000"	"28.000"	"0.112893312468011"	"14"	"0.0001859"	"0.0003535"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMEELIPLVNK"	"[R].gMEELIPLVNk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"567.67181"	"1701.00089"	"1701.00210"	"-0.71"	"-0.00040"	"14/84"	"14"	"84"	"6908639.11071777"	"HCD"	"MS2"	"11.16553"	"157.3"	"100.000"	"66.0957"	"21389"	"21389"	"21369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.2"	""	"223.9"	""	"227.3"	""	"171.5"	""	"308.2"	"321.8"	""	"712"	"42"	"35.000"	"28.000"	"0.00229852905536338"	"22"	"0"	"3.247E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMEELIPLVNK"	"[R].gMEELIPLVNk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"851.00433"	"1701.00139"	"1701.00210"	"-0.42"	"-0.00035"	"11/84"	"11"	"84"	"442240.754150391"	"HCD"	"MS2"	"33.75256"	"32.3"	"100.000"	"66.3231"	"21535"	"21535"	"21507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.9"	""	"46.6"	""	"54.1"	""	"42.5"	"0.3"	"55.9"	"58.8"	""	"711"	"14"	"35.000"	"28.000"	"1.42836633256798"	"13"	"0.0002277"	"0.001225"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMEELIPLVNK"	"[R].gMEELIPLVNk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"851.00433"	"1701.00139"	"1701.00210"	"-0.42"	"-0.00035"	"9/84"	"9"	"84"	"1728307.4105835"	"HCD"	"MS2"	"11.05853"	"120.3"	"100.000"	"66.0677"	"21378"	"21378"	"21353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.8"	""	"166.0"	""	"159.9"	""	"127.1"	""	"228.9"	"259.0"	""	"711"	"55"	"35.000"	"28.000"	"0.000101587343816979"	"20"	"0"	"3.779E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMEELIPLVNK"	"[R].gMEELIPLVNk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"567.67218"	"1701.00199"	"1701.00210"	"-0.07"	"-0.00004"	"6/84"	"6"	"84"	"1063649.07342529"	"HCD"	"MS2"	"23.56442"	"40.2"	"100.000"	"66.4669"	"21541"	"21541"	"21513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.3"	"1.9"	"55.7"	""	"56.3"	""	"66.6"	"0.2"	"73.5"	"67.7"	""	"716"	"18"	"35.000"	"28.000"	"0.521054350848344"	"15"	"0.0001889"	"0.0003923"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8391"	"0.0000"	"1"	"1"	"1"	"851.01794"	"1701.02861"	"1701.03109"	"-1.46"	"-0.00124"	"11/116"	"11"	"116"	"775056.649169922"	"HCD"	"MS2"	"24.54651"	"64.4"	"100.000"	"60.0437"	"18918"	"18918"	"18889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.8"	""	"85.3"	""	"88.4"	""	"111.3"	"2.0"	"107.3"	"105.3"	""	"587"	"87"	"34.000"	"27.000"	"6.3475788671388E-08"	""	"0"	"7.012E-07"	"1.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7755"	"0.0000"	"1"	"1"	"1"	"567.68134"	"1701.02945"	"1701.03109"	"-0.96"	"-0.00055"	"11/116"	"11"	"116"	"7783730.75360107"	"HCD"	"MS2"	"20.57093"	"202.5"	"100.000"	"60.2462"	"19054"	"19054"	"19027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.9"	""	"286.3"	""	"285.0"	""	"333.6"	"0.1"	"329.3"	"335.0"	""	"558"	"49"	"34.000"	"27.000"	"0.000321813458932084"	"27"	"0"	"1.624E-05"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"851.01843"	"1701.02959"	"1701.03109"	"-0.88"	"-0.00075"	"11/116"	"11"	"116"	"1765513.16339111"	"HCD"	"MS2"	"0"	"136.6"	"100.000"	"60.6411"	"19162"	"19162"	"19145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.3"	""	"179.5"	""	"194.6"	""	"216.0"	""	"235.6"	"242.1"	""	"558"	"93"	"34.000"	"27.000"	"1.29004304970394E-08"	""	"0"	"1.093E-06"	"1.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"851.01855"	"1701.02983"	"1701.03109"	"-0.74"	"-0.00063"	"19/116"	"19"	"116"	"912158.388244629"	"HCD"	"MS2"	"8.298465"	"81.2"	"100.000"	"60.9107"	"19325"	"19325"	"19299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.9"	""	"112.8"	""	"116.5"	""	"130.8"	""	"145.5"	"147.0"	""	"558"	"76"	"34.000"	"27.000"	"6.91200754079685E-07"	""	"0"	"5.763E-06"	"1.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"567.68158"	"1701.03019"	"1701.03109"	"-0.53"	"-0.00030"	"9/116"	"9"	"116"	"2996190.12835693"	"HCD"	"MS2"	"10.88688"	"101.8"	"100.000"	"60.9130"	"19326"	"19326"	"19299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.1"	""	"133.3"	""	"148.9"	""	"162.1"	"1.9"	"192.4"	"177.0"	""	"550"	"43"	"34.000"	"27.000"	"0.00127447902927479"	"26"	"0"	"2.137E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8352"	"0.0000"	"1"	"1"	"1"	"851.01886"	"1701.03044"	"1701.03109"	"-0.38"	"-0.00032"	"11/116"	"11"	"116"	"42417336.3999023"	"HCD"	"MS2"	"0"	"381.7"	"13.167"	"60.3275"	"19034"	"19034"	"19017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"627.7"	""	"478.8"	""	"543.9"	""	"616.5"	"0.4"	"677.4"	"667.6"	""	"548"	"91"	"34.000"	"27.000"	"2.22203329851952E-08"	""	"0"	"6.762E-06"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.6750"	"0.0000"	"1"	"1"	"1"	"567.68170"	"1701.03055"	"1701.03109"	"-0.32"	"-0.00018"	"10/116"	"10"	"116"	"3028265.67486572"	"HCD"	"MS2"	"5.767502"	"107.4"	"100.000"	"60.7289"	"19197"	"19197"	"19177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.4"	""	"140.7"	""	"152.9"	""	"169.9"	""	"212.0"	"204.8"	""	"548"	"40"	"34.000"	"27.000"	"0.00264697940843209"	""	"0"	"5.437E-05"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"851.01917"	"1701.03105"	"1701.03109"	"-0.02"	"-0.00002"	"19/116"	"19"	"116"	"17554095.0731201"	"HCD"	"MS2"	"0"	"409.5"	"36.780"	"60.5738"	"19188"	"19188"	"19171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"701.5"	""	"516.0"	""	"584.3"	""	"595.4"	""	"721.3"	"757.8"	""	"542"	"84"	"34.000"	"27.000"	"1.17211248210487E-07"	""	"0"	"4.465E-06"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"851.01959"	"1701.03191"	"1701.03109"	"0.48"	"0.00041"	"11/116"	"11"	"116"	"4202436.13519287"	"HCD"	"MS2"	"0"	"276.4"	"100.000"	"60.2669"	"19062"	"19062"	"19043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"450.7"	""	"392.0"	""	"406.9"	""	"463.4"	"3.2"	"452.9"	"443.8"	""	"539"	"88"	"34.000"	"27.000"	"4.3307066768697E-08"	""	"0"	"2.685E-06"	"1.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.6591"	"0.0000"	"1"	"1"	"1"	"567.68237"	"1701.03257"	"1701.03109"	"0.87"	"0.00049"	"7/116"	"7"	"116"	"7928936.20635986"	"HCD"	"MS2"	"29.33999"	"211.4"	"100.000"	"60.1130"	"18946"	"18946"	"18921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"351.0"	""	"295.9"	""	"291.8"	""	"341.2"	"1.4"	"370.6"	"348.7"	""	"537"	"44"	"34.000"	"27.000"	"0.00106645931032545"	""	"0"	"2.583E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"567.68274"	"1701.03366"	"1701.03109"	"1.51"	"0.00086"	"11/116"	"11"	"116"	"81952304.2519531"	"HCD"	"MS2"	"3.794634"	"188.3"	"9.650"	"60.5347"	"19172"	"19172"	"19155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.9"	""	"220.1"	""	"292.3"	""	"288.6"	"0.3"	"339.2"	"334.5"	""	"570"	"50"	"34.000"	"27.000"	"0.000306792585884503"	""	"0"	"4.314E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLINNLGTIAk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"567.68292"	"1701.03421"	"1701.03109"	"1.84"	"0.00104"	"11/116"	"11"	"116"	"74673103.0200195"	"HCD"	"MS2"	"4.205369"	"212.5"	"12.634"	"60.4059"	"19066"	"19066"	"19049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"356.8"	""	"274.9"	""	"305.4"	""	"326.3"	"1.4"	"372.6"	"373.2"	""	"568"	"50"	"34.000"	"27.000"	"0.000302216617175706"	""	"0"	"3.929E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALEVGELVK"	"[K].tALALEVGELVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"851.03125"	"1701.05522"	"1701.05624"	"-0.60"	"-0.00051"	"11/104"	"11"	"104"	"604259.719665527"	"HCD"	"MS2"	"29.43096"	"47.0"	"100.000"	"69.2191"	"22708"	"22708"	"22682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.4"	""	"69.7"	""	"61.7"	""	"86.5"	""	"81.2"	"88.1"	""	"442"	"66"	"33.000"	"26.000"	"5.97574798468054E-06"	"26"	"0"	"3.056E-06"	"1.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALEVGELVK"	"[K].tALALEVGELVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"851.03156"	"1701.05583"	"1701.05624"	"-0.24"	"-0.00020"	"11/104"	"11"	"104"	"710100.460693359"	"HCD"	"MS2"	"25.80951"	"57.3"	"100.000"	"69.3038"	"22691"	"22691"	"22666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.9"	""	"71.0"	""	"76.6"	""	"105.4"	"0.8"	"105.0"	"111.5"	""	"442"	"66"	"33.000"	"26.000"	"5.58974857214598E-06"	""	"0"	"3.408E-06"	"1.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALEVGELVK"	"[K].tALALEVGELVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"567.69031"	"1701.05637"	"1701.05624"	"0.07"	"0.00004"	"8/104"	"8"	"104"	"2347551.98596191"	"HCD"	"MS2"	"10.7387"	"64.6"	"100.000"	"69.1432"	"22677"	"22677"	"22650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.4"	""	"82.3"	""	"86.4"	""	"115.2"	""	"122.8"	"124.7"	""	"426"	"45"	"33.000"	"26.000"	"0.000698842974330943"	""	"0"	"2.174E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGPAGPYGIFAGR"	"[K].fYGPAGPYGIFAGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"851.44910"	"1701.89092"	"1701.89504"	"-2.42"	"-0.00206"	"9/106"	"9"	"106"	"523706.840026855"	"HCD"	"MS2"	"9.178229"	"38.1"	"100.000"	"65.1146"	"21042"	"21042"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.6"	""	"53.4"	""	"52.3"	""	"60.5"	"0.4"	"69.4"	"76.5"	""	"951"	"10"	"36.000"	"29.000"	"5.31068474319657"	"14"	"0.001217"	"0.01786"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGPAGPYGIFAGR"	"[K].fYGPAGPYGIFAGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"851.44958"	"1701.89189"	"1701.89504"	"-1.85"	"-0.00157"	"6/106"	"6"	"106"	"395615.542480469"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"65.1252"	"20993"	"20993"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.2"	""	"45.4"	""	"40.8"	""	"50.8"	""	"53.4"	"69.0"	""	"948"	"4"	"36.000"	"29.000"	"18.2716741533576"	"13"	"0.002424"	"0.0356"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGPAGPYGIFAGR"	"[K].fYGPAGPYGIFAGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.96918"	"1701.89298"	"1701.89504"	"-1.21"	"-0.00069"	"12/106"	"12"	"106"	"1596985.29803467"	"HCD"	"MS2"	"16.81964"	"45.6"	"100.000"	"64.9063"	"20904"	"20904"	"20873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.3"	""	"53.2"	""	"66.1"	""	"89.2"	"0.2"	"83.9"	"82.8"	""	"955"	"46"	"36.000"	"29.000"	"0.00118296903251989"	"15"	"0"	"1.162E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGPAGPYGIFAGR"	"[K].fYGPAGPYGIFAGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.96918"	"1701.89298"	"1701.89504"	"-1.21"	"-0.00069"	"15/106"	"15"	"106"	"1548951.27246094"	"HCD"	"MS2"	"13.07082"	"42.2"	"100.000"	"64.9396"	"20970"	"20970"	"20947"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.1"	""	"49.3"	""	"58.4"	""	"75.3"	"0.5"	"81.2"	"77.5"	""	"955"	"29"	"36.000"	"29.000"	"0.0672935401246445"	"14"	"0"	"9.709E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGPAGPYGIFAGR"	"[K].fYGPAGPYGIFAGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"851.45074"	"1701.89421"	"1701.89504"	"-0.49"	"-0.00042"	"13/106"	"13"	"106"	"1183509.56976318"	"HCD"	"MS2"	"0"	"66.2"	"100.000"	"64.7920"	"20910"	"20910"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.7"	""	"93.6"	""	"97.5"	""	"118.5"	"1.7"	"110.0"	"133.4"	""	"975"	"49"	"36.000"	"29.000"	"0.000580730478913345"	"16"	"0"	"7.508E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGPAGPYGIFAGR"	"[K].fYGPAGPYGIFAGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"851.45184"	"1701.89641"	"1701.89504"	"0.80"	"0.00068"	"20/106"	"20"	"106"	"1399624.11975098"	"HCD"	"MS2"	"20.58726"	"75.1"	"100.000"	"64.8187"	"20868"	"20868"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.7"	""	"106.5"	""	"100.0"	""	"137.3"	""	"119.6"	"153.8"	""	"965"	"50"	"36.000"	"29.000"	"0.000461846139399763"	"21"	"0"	"2.259E-06"	"1.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLmAYMASk.[E]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"567.98126"	"1701.92923"	"1701.93197"	"-1.61"	"-0.00091"	"10/94"	"10"	"94"	"4021969.86224365"	"HCD"	"MS2"	"0"	"110.6"	"100.000"	"59.6436"	"18754"	"18754"	"18729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.7"	""	"151.9"	""	"168.3"	""	"180.9"	"1.2"	"199.3"	"197.7"	""	"1056"	"33"	"37.000"	"30.000"	"0.0268308185671976"	"20"	"7.476E-05"	"0.000203"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYmASk.[E]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.5082"	"0.0000"	"1"	"1"	"1"	"851.46844"	"1701.92961"	"1701.93197"	"-1.39"	"-0.00118"	"17/94"	"17"	"94"	"2080858.38525391"	"HCD"	"MS2"	"0"	"142.3"	"100.000"	"56.3205"	"17455"	"17455"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.0"	""	"208.0"	""	"233.2"	""	"213.0"	"4.3"	"228.2"	"243.2"	""	"1057"	"61"	"37.000"	"30.000"	"4.0275875679843E-05"	"16"	"0"	"0.0001801"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLmAYMASk.[E]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"567.98181"	"1701.93088"	"1701.93197"	"-0.64"	"-0.00036"	"10/94"	"10"	"94"	"5855283.88122559"	"HCD"	"MS2"	"0"	"116.1"	"100.000"	"59.8047"	"18873"	"18873"	"18853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.2"	""	"162.3"	""	"193.7"	""	"188.8"	""	"198.8"	"211.6"	""	"1071"	"14"	"37.000"	"30.000"	"2.16152107934153"	"15"	"0.0001889"	"0.0005084"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYmASk.[E]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"567.98193"	"1701.93125"	"1701.93197"	"-0.43"	"-0.00024"	"12/94"	"12"	"94"	"11670343.5280151"	"HCD"	"MS2"	"27.6005"	"193.6"	"66.175"	"56.3854"	"17481"	"17481"	"17461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.0"	""	"272.1"	""	"315.6"	""	"293.3"	"5.2"	"314.5"	"363.2"	""	"1056"	"34"	"37.000"	"30.000"	"0.0197985745185615"	"19"	"0"	"0.0001654"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYmASk.[E]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.5763"	"0.0000"	"1"	"1"	"1"	"851.46960"	"1701.93193"	"1701.93197"	"-0.02"	"-0.00002"	"17/94"	"17"	"94"	"2475224.5244751"	"HCD"	"MS2"	"3.820756"	"168.9"	"100.000"	"56.1886"	"17347"	"17347"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.5"	""	"249.7"	""	"271.5"	""	"248.1"	"1.1"	"271.2"	"309.8"	""	"1051"	"59"	"37.000"	"30.000"	"6.60043745921657E-05"	"16"	"0.0001889"	"0.0005336"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLMAYmASk.[E]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"567.98236"	"1701.93253"	"1701.93197"	"0.33"	"0.00019"	"11/94"	"11"	"94"	"10302438.4979858"	"HCD"	"MS2"	"28.23231"	"262.7"	"100.000"	"56.1818"	"17344"	"17344"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"360.1"	""	"372.9"	""	"426.7"	""	"371.3"	"2.9"	"479.2"	"474.6"	""	"1049"	"40"	"37.000"	"30.000"	"0.00547955754981309"	"19"	"0"	"0.0001238"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLTLSNELSQAR"	"[R].qLLTLSNELSQAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"567.99469"	"1701.96952"	"1701.96966"	"-0.09"	"-0.00005"	"13/132"	"13"	"132"	"2792176.23468018"	"HCD"	"MS2"	"7.916525"	"96.5"	"100.000"	"55.0626"	"16940"	"16940"	"16917"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.9"	""	"136.0"	""	"134.3"	""	"151.9"	"3.2"	"182.6"	"184.3"	""	"922"	"41"	"36.000"	"29.000"	"0.00340173850089515"	"23"	"0"	"1.831E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLTLSNELSQAR"	"[R].qLLTLSNELSQAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"851.48956"	"1701.97185"	"1701.96966"	"1.28"	"0.00109"	"9/132"	"9"	"132"	"634424.221557617"	"HCD"	"MS2"	"0"	"50.8"	"100.000"	"54.8749"	"16810"	"16810"	"16780"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.3"	""	"51.4"	""	"59.8"	""	"97.9"	"2.1"	"115.3"	"99.5"	""	"913"	"35"	"36.000"	"29.000"	"0.0135656554348841"	"24"	"0"	"0.0001401"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLTLSNELSQAR"	"[R].qLLTLSNELSQAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"851.48993"	"1701.97258"	"1701.96966"	"1.71"	"0.00146"	"9/132"	"9"	"132"	"721762.017150879"	"HCD"	"MS2"	"0"	"54.8"	"100.000"	"55.0418"	"16932"	"16932"	"16901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.4"	""	"55.3"	""	"58.2"	""	"113.1"	"2.3"	"117.0"	"119.9"	""	"920"	"60"	"36.000"	"29.000"	"4.61060409515833E-05"	"26"	"0"	"1.451E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLTLSNELSQAR"	"[R].qLLTLSNELSQAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"567.99597"	"1701.97336"	"1701.96966"	"2.17"	"0.00123"	"15/132"	"15"	"132"	"2826580.37237549"	"HCD"	"MS2"	"26.72756"	"83.6"	"100.000"	"54.8312"	"16792"	"16792"	"16764"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.7"	""	"100.5"	""	"125.7"	""	"148.2"	"2.0"	"165.3"	"152.5"	""	"920"	"51"	"36.000"	"29.000"	"0.000351364460445737"	"23"	"0"	"1.913E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIEYYSQLK"	"[R].vTIEYYSQLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.99902"	"1701.98252"	"1701.98274"	"-0.13"	"-0.00008"	"6/86"	"6"	"86"	"8083871.05554199"	"HCD"	"MS2"	"23.11331"	"282.5"	"100.000"	"52.7084"	"15995"	"15995"	"15974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"391.5"	""	"409.9"	""	"476.2"	""	"431.1"	""	"480.8"	"485.6"	""	"875"	"14"	"36.000"	"29.000"	"1.75783479746411"	"13"	"0.000523"	"0.003042"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIEYYSQLK"	"[R].vTIEYYSQLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"851.49567"	"1701.98406"	"1701.98274"	"0.77"	"0.00066"	"15/86"	"15"	"86"	"1526317.99676514"	"HCD"	"MS2"	"23.09555"	"125.2"	"100.000"	"52.7176"	"15999"	"15999"	"15974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.1"	""	"195.8"	""	"195.6"	""	"185.6"	""	"215.3"	"216.2"	""	"855"	"46"	"36.000"	"29.000"	"0.00104216412485264"	"26"	"0"	"2.262E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIEYYSQLK"	"[R].vTIEYYSQLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"567.99957"	"1701.98417"	"1701.98274"	"0.83"	"0.00047"	"8/86"	"8"	"86"	"8811245.38934326"	"HCD"	"MS2"	"35.74539"	"284.3"	"100.000"	"52.5079"	"15863"	"15863"	"15842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"385.1"	""	"433.0"	""	"450.4"	""	"419.5"	"0.6"	"502.3"	"500.8"	""	"855"	"42"	"36.000"	"29.000"	"0.00272230085188134"	"19"	"0.0001859"	"0.0003594"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIEYYSQLK"	"[R].vTIEYYSQLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"851.49585"	"1701.98442"	"1701.98274"	"0.99"	"0.00084"	"9/86"	"9"	"86"	"1244065.38165283"	"HCD"	"MS2"	"24.28085"	"104.6"	"100.000"	"52.5563"	"15883"	"15883"	"15858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.9"	""	"156.8"	""	"157.9"	""	"152.5"	"1.0"	"182.7"	"192.1"	""	"852"	"48"	"36.000"	"29.000"	"0.000733516012944039"	""	"0"	"3.223E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQDLQLANNK"	"[K].sLQDLQLANNk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"568.00067"	"1701.98746"	"1701.98995"	"-1.47"	"-0.00083"	"12/102"	"12"	"102"	"3286992.8036499"	"HCD"	"MS2"	"0"	"127.6"	"100.000"	"44.4449"	"12630"	"12630"	"12604"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.2"	""	"133.5"	""	"148.1"	""	"235.5"	"2.2"	"277.2"	"275.1"	""	"841"	"40"	"36.000"	"29.000"	"0.0044541619143705"	"17"	"0"	"0.0001305"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLInNLGTIAk.[S]"	"N-Term(TMT6plex); N5(Deamidated); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.2043"	"0.0000"	"1"	"1"	"1"	"851.51044"	"1702.01360"	"1702.01511"	"-0.89"	"-0.00075"	"20/116"	"20"	"116"	"1213140.63372803"	"HCD"	"MS2"	"11.57725"	"99.3"	"100.000"	"64.0821"	"20620"	"20620"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.3"	""	"114.0"	""	"134.2"	""	"166.0"	"2.5"	"182.6"	"173.3"	""	"686"	"93"	"35.000"	"28.000"	"1.74700488772618E-08"	""	"0"	"6.997E-07"	"1.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLInNLGTIAk.[S]"	"N-Term(TMT6plex); N5(Deamidated); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.2586"	"0.0000"	"1"	"1"	"1"	"851.51178"	"1702.01628"	"1702.01511"	"0.69"	"0.00059"	"15/116"	"15"	"116"	"829003.629699707"	"HCD"	"MS2"	"0"	"73.4"	"100.000"	"64.1461"	"20593"	"20593"	"20569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.7"	""	"94.2"	""	"106.6"	""	"108.6"	""	"146.4"	"142.2"	""	"658"	"58"	"35.000"	"28.000"	"5.70421515261111E-05"	"24"	"0"	"1.443E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLINNLGTIAK"	"[K].aDLInNLGTIAk.[S]"	"N-Term(TMT6plex); N5(Deamidated); K12(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.1053"	"0.0000"	"1"	"1"	"1"	"568.01624"	"1702.03415"	"1702.01511"	"11.19"	"0.00635"	"13/116"	"13"	"116"	"1959058.77996826"	"HCD"	"MS2"	"7.907789"	"79.9"	"100.000"	"60.9728"	"19350"	"19350"	"19331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.8"	""	"98.8"	""	"115.2"	""	"126.3"	""	"163.1"	"159.0"	""	"594"	"19"	"34.000"	"27.000"	"0.371326931974663"	"22"	"0.005916"	"0.1953"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLLKPELLR"	"[R].dFLLkPELLR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"568.02698"	"1702.06638"	"1702.06675"	"-0.22"	"-0.00012"	"7/94"	"7"	"94"	"21968093.8066406"	"HCD"	"MS2"	"9.358755"	"382.1"	"41.614"	"58.9193"	"18459"	"18459"	"18441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"552.0"	""	"470.8"	""	"453.0"	""	"669.8"	"0.6"	"751.9"	"725.1"	""	"384"	"10"	"32.000"	"25.000"	"1.77133714013714"	"13"	"0.0001308"	"0.0002608"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLLKPELLR"	"[R].dFLLkPELLR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"568.02734"	"1702.06748"	"1702.06675"	"0.43"	"0.00024"	"7/94"	"7"	"94"	"13604725.0844116"	"HCD"	"MS2"	"14.60648"	"548.0"	"100.000"	"58.6356"	"18347"	"18347"	"18329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"757.9"	""	"703.1"	""	"685.5"	""	"1004.9"	""	"1045.5"	"1009.3"	""	"380"	"1"	"32.000"	"25.000"	"14.0525002261065"	"13"	"0.0006037"	"0.005207"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLLKPELLR"	"[R].dFLLkPELLR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"568.02740"	"1702.06766"	"1702.06675"	"0.54"	"0.00030"	"13/94"	"13"	"94"	"22929954.7143555"	"HCD"	"MS2"	"10.19971"	"466.2"	"47.251"	"59.0550"	"18567"	"18567"	"18549"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"675.2"	""	"547.7"	""	"522.2"	""	"828.3"	"1.1"	"934.9"	"914.2"	""	"383"	"11"	"32.000"	"25.000"	"1.60017977991284"	"13"	"0.0001889"	"0.0005415"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLLKPELLR"	"[R].dFLLkPELLR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"568.02753"	"1702.06803"	"1702.06675"	"0.75"	"0.00043"	"7/94"	"7"	"94"	"11027975.3571167"	"HCD"	"MS2"	"30.11616"	"471.0"	"100.000"	"58.7483"	"18443"	"18443"	"18421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"723.7"	""	"594.2"	""	"570.4"	""	"866.5"	"2.9"	"848.7"	"855.0"	""	"379"	"9"	"32.000"	"25.000"	"2.33135932068946"	"13"	"0.0001889"	"0.0009675"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWTDGLFTHVLR"	"[R].eWTDGLFTHVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"568.30701"	"1702.90647"	"1702.91142"	"-2.91"	"-0.00165"	"14/102"	"14"	"102"	"6352374.70758057"	"HCD"	"MS2"	"8.738147"	"98.4"	"100.000"	"59.7563"	"18800"	"18800"	"18777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.6"	""	"126.3"	""	"148.3"	""	"171.8"	""	"175.0"	"190.3"	""	"1032"	"34"	"37.000"	"30.000"	"0.0184352784486395"	"20"	"0"	"4.216E-05"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWTDGLFTHVLR"	"[R].eWTDGLFTHVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8868"	"0.0000"	"1"	"1"	"1"	"568.30743"	"1702.90775"	"1702.91142"	"-2.16"	"-0.00122"	"10/102"	"10"	"102"	"7308563.33886719"	"HCD"	"MS2"	"28.14296"	"113.7"	"100.000"	"59.8849"	"18906"	"18906"	"18884"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.0"	""	"150.5"	""	"163.9"	""	"178.0"	""	"220.0"	"222.4"	""	"1034"	"53"	"37.000"	"30.000"	"0.000233072236247935"	"22"	"0"	"5.894E-06"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLQDIYTSNK"	"[R].yLQDIYTSNk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"851.97357"	"1702.93987"	"1702.94161"	"-1.02"	"-0.00087"	"13/94"	"13"	"94"	"327212.124511719"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"46.8016"	"13539"	"13539"	"13512"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.8"	""	"49.6"	""	"36.5"	""	"72.4"	"0.9"	"71.9"	"57.0"	""	"1078"	"31"	"37.000"	"30.000"	"0.0422268577450988"	"16"	"0"	"0.0001518"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLQDIYTSNK"	"[R].yLQDIYTSNk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"851.97418"	"1702.94109"	"1702.94161"	"-0.31"	"-0.00026"	"12/94"	"12"	"94"	"391933.833312988"	"HCD"	"MS2"	"0"	"42.6"	"100.000"	"47.0699"	"13697"	"13697"	"13666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.2"	""	"51.9"	""	"48.1"	""	"92.2"	"1.2"	"76.0"	"71.2"	""	"1068"	"38"	"37.000"	"30.000"	"0.0087004408142961"	"16"	"0"	"6.166E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLQDIYTSNK"	"[R].yLQDIYTSNk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"851.97491"	"1702.94255"	"1702.94161"	"0.55"	"0.00047"	"9/94"	"9"	"94"	"3125352.23999023"	"HCD"	"MS2"	"0"	"273.1"	"100.000"	"46.4816"	"13408"	"13408"	"13384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"362.4"	""	"338.3"	""	"261.2"	""	"566.8"	""	"604.9"	"460.7"	""	"1059"	"35"	"37.000"	"30.000"	"0.0181495542976346"	"22"	"0"	"0.0001491"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLQDIYTSNK"	"[R].yLQDIYTSNk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"851.97510"	"1702.94292"	"1702.94161"	"0.77"	"0.00066"	"16/94"	"16"	"94"	"2443556.0947876"	"HCD"	"MS2"	"0"	"215.8"	"100.000"	"46.7369"	"13560"	"13560"	"13538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"306.3"	""	"257.5"	""	"187.7"	""	"477.7"	""	"450.0"	"368.5"	""	"1049"	"48"	"37.000"	"30.000"	"0.000842840687205254"	"23"	"0"	"5.4E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLEQTLTK"	"[K].mQHLEQTLTk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"568.32239"	"1702.95261"	"1702.95621"	"-2.12"	"-0.00120"	"11/96"	"11"	"96"	"2256192.1159668"	"HCD"	"MS2"	"0"	"125.9"	"100.000"	"30.4039"	"6898"	"6898"	"6869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.3"	""	"165.2"	""	"171.5"	""	"239.8"	"2.5"	"229.7"	"200.1"	""	"1013"	"9"	"37.000"	"30.000"	"6.17418231855445"	"13"	"0.00103"	"0.01151"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLEQTLTK"	"[K].mQHLEQTLTk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"568.32263"	"1702.95334"	"1702.95621"	"-1.69"	"-0.00096"	"4/96"	"4"	"96"	"2106720.54138184"	"HCD"	"MS2"	"0"	"117.0"	"100.000"	"30.3234"	"6824"	"6824"	"6794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.0"	""	"156.9"	""	"166.0"	""	"231.3"	""	"204.7"	"185.1"	""	"1008"	"9"	"37.000"	"30.000"	"6.2148483594737"	"13"	"0.0003839"	"0.001541"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPENPPSMVFk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"568.32397"	"1702.95737"	"1702.96023"	"-1.68"	"-0.00095"	"10/102"	"10"	"102"	"5053089.05371094"	"HCD"	"MS2"	"11.95205"	"178.4"	"100.000"	"50.7180"	"15181"	"15181"	"15162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.7"	""	"125.8"	""	"450.7"	""	"185.0"	"3.8"	"377.8"	"393.8"	""	"1012"	"31"	"37.000"	"30.000"	"0.0387391883097096"	"19"	"0"	"0.0001437"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPENPPSMVFk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"851.98260"	"1702.95793"	"1702.96023"	"-1.35"	"-0.00115"	"9/102"	"9"	"102"	"1564923.65014648"	"HCD"	"MS2"	"0"	"85.4"	"100.000"	"50.4087"	"15055"	"15055"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.6"	""	"56.5"	""	"49.6"	""	"104.8"	""	"261.0"	"260.6"	""	"988"	"46"	"36.000"	"29.000"	"0.00135122275079552"	"17"	"0"	"0.0001459"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPENPPSMVFk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"568.32434"	"1702.95847"	"1702.96023"	"-1.04"	"-0.00059"	"10/102"	"10"	"102"	"3412251.87005615"	"HCD"	"MS2"	"71.77736"	"159.0"	"100.000"	"50.0891"	"14877"	"14877"	"14857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.5"	""	"165.2"	""	"288.9"	""	"204.9"	""	"345.0"	"353.4"	""	"989"	"21"	"36.000"	"29.000"	"0.359059395951684"	"18"	"0.0001889"	"0.0005208"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPENPPSMVFk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"851.98297"	"1702.95867"	"1702.96023"	"-0.92"	"-0.00078"	"8/102"	"8"	"102"	"1323628.37414551"	"HCD"	"MS2"	"0"	"68.4"	"100.000"	"50.7203"	"15182"	"15182"	"15162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.0"	""	"42.8"	""	"46.4"	""	"76.5"	"0.8"	"202.5"	"214.7"	""	"993"	"57"	"36.000"	"29.000"	"0.000106639783040581"	"19"	"0"	"7.308E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPENPPSMVFk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"568.32446"	"1702.95884"	"1702.96023"	"-0.82"	"-0.00047"	"12/102"	"12"	"102"	"4772527.36810303"	"HCD"	"MS2"	"43.54021"	"180.8"	"100.000"	"50.4133"	"15057"	"15057"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.1"	""	"112.5"	""	"506.0"	""	"160.8"	"1.5"	"381.1"	"402.6"	""	"981"	"36"	"36.000"	"29.000"	"0.0118478353929524"	"18"	"0"	"0.0001112"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPENPPSMVFk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9649"	"0.0000"	"1"	"1"	"1"	"851.98346"	"1702.95964"	"1702.96023"	"-0.35"	"-0.00030"	"8/102"	"8"	"102"	"1461999.96655273"	"HCD"	"MS2"	"0"	"74.9"	"100.000"	"50.1557"	"14903"	"14903"	"14890"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.7"	""	"43.5"	""	"49.3"	""	"86.3"	"2.1"	"225.4"	"220.5"	""	"977"	"57"	"36.000"	"29.000"	"0.000100199272435629"	"19"	"0.0001308"	"0.000231"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPENPPSMVFk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"568.32501"	"1702.96048"	"1702.96023"	"0.15"	"0.00008"	"9/102"	"9"	"102"	"5322360.51739502"	"HCD"	"MS2"	"7.09831"	"162.6"	"100.000"	"50.4144"	"15007"	"15007"	"14984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.7"	""	"110.3"	""	"228.0"	""	"197.8"	""	"458.4"	"398.3"	""	"974"	"25"	"36.000"	"29.000"	"0.168085001056562"	"14"	"0.0001859"	"0.0003358"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPENPPSMVFk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"851.98395"	"1702.96062"	"1702.96023"	"0.23"	"0.00019"	"10/102"	"10"	"102"	"1471692.36254883"	"HCD"	"MS2"	"0"	"76.0"	"100.000"	"50.4741"	"15031"	"15031"	"15015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.4"	""	"41.9"	""	"49.4"	""	"88.2"	"0.3"	"239.1"	"223.9"	""	"974"	"53"	"36.000"	"29.000"	"0.000244078182776482"	"20"	"0"	"6.034E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLEQTLTK"	"[K].mQHLEQTLTk.[D]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"568.33051"	"1702.97696"	"1702.95621"	"12.19"	"0.00692"	"6/96"	"6"	"96"	"2956860.9342041"	"HCD"	"MS2"	"8.661303"	"183.1"	"100.000"	"30.0415"	"6708"	"6708"	"6682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.2"	""	"188.4"	""	"232.0"	""	"295.8"	"2.8"	"413.7"	"399.6"	""	"962"	"5"	"36.000"	"29.000"	"14.0975965096541"	"16"	"0.003788"	"0.0917"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAHTNVESLVK"	"[R].fAHTNVESLVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"568.33423"	"1702.98813"	"1702.98923"	"-0.64"	"-0.00036"	"9/100"	"9"	"100"	"16408742.2303467"	"HCD"	"MS2"	"16.66099"	"351.2"	"45.145"	"39.6452"	"10675"	"10675"	"10654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.6"	""	"424.1"	""	"469.9"	""	"566.0"	""	"694.2"	"770.4"	""	"883"	"23"	"36.000"	"29.000"	"0.220257501213595"	"17"	"0"	"0.0001532"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAHTNVESLVK"	"[R].fAHTNVESLVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"851.99878"	"1702.99028"	"1702.98923"	"0.62"	"0.00053"	"11/100"	"11"	"100"	"173254.637695313"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"39.5174"	"10580"	"10580"	"10550"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.6"	""	"24.8"	""	"24.2"	""	"29.2"	""	"37.0"	"32.8"	""	"843"	"32"	"36.000"	"29.000"	"0.0271517345414647"	"17"	"0.0001889"	"0.0007363"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEWLTLVEK"	"[K].iNEWLTLVEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"852.00989"	"1703.01250"	"1703.01438"	"-1.10"	"-0.00094"	"9/100"	"9"	"100"	"479617.739379883"	"HCD"	"MS2"	"26.88701"	"40.0"	"100.000"	"80.3063"	"27221"	"27221"	"27199"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.1"	""	"42.6"	""	"56.3"	""	"77.9"	"0.8"	"77.5"	"73.2"	""	"728"	"60"	"35.000"	"28.000"	"4.00960308673075E-05"	""	"0"	"2.157E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEWLTLVEK"	"[K].iNEWLTLVEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"852.00995"	"1703.01262"	"1703.01438"	"-1.03"	"-0.00088"	"13/100"	"13"	"100"	"226746.917053223"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"80.6155"	"27347"	"27347"	"27327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.2"	""	"25.8"	""	"23.9"	""	"37.3"	""	"40.1"	"41.7"	""	"728"	"48"	"35.000"	"28.000"	"0.000544629778818374"	"24"	"0"	"0.0001561"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEWLTLVEK"	"[K].iNEWLTLVEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"852.01001"	"1703.01274"	"1703.01438"	"-0.96"	"-0.00082"	"12/100"	"12"	"100"	"179636.854492188"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"80.6669"	"27317"	"27317"	"27296"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.8"	""	"18.7"	""	"22.6"	""	"26.2"	""	"32.3"	"32.9"	""	"780"	"40"	"35.000"	"28.000"	"0.00359802856590357"	"24"	"0"	"0.0001308"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEWLTLVEK"	"[K].iNEWLTLVEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"568.34247"	"1703.01285"	"1703.01438"	"-0.90"	"-0.00051"	"12/100"	"12"	"100"	"1949295.38262939"	"HCD"	"MS2"	"28.1002"	"55.2"	"100.000"	"80.4039"	"27210"	"27210"	"27185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.6"	""	"67.7"	""	"82.9"	""	"80.6"	"0.0"	"108.7"	"109.8"	""	"756"	"45"	"35.000"	"28.000"	"0.00108265927262469"	"27"	"0"	"4.792E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEWLTLVEK"	"[K].iNEWLTLVEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"568.34253"	"1703.01303"	"1703.01438"	"-0.79"	"-0.00045"	"10/100"	"10"	"100"	"465806.667358398"	"HCD"	"MS2"	"31.23639"	"20.0"	"100.000"	"80.6963"	"27380"	"27380"	"27358"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.6"	""	"25.0"	""	"31.9"	""	"31.6"	"2.1"	"38.6"	"37.6"	""	"754"	"31"	"35.000"	"28.000"	"0.031213419571955"	"24"	"0.0001308"	"0.0003101"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEWLTLVEK"	"[K].iNEWLTLVEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"568.34283"	"1703.01395"	"1703.01438"	"-0.25"	"-0.00014"	"11/100"	"11"	"100"	"2006992.20776367"	"HCD"	"MS2"	"19.05091"	"56.5"	"100.000"	"80.3871"	"27254"	"27254"	"27231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.9"	""	"68.9"	""	"76.2"	""	"101.6"	""	"107.7"	"110.0"	""	"754"	"39"	"35.000"	"28.000"	"0.0047900643766362"	"24"	"0"	"0.0001677"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQVLK"	"[R].lIDDMVAQVLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7193"	"0.0000"	"1"	"1"	"1"	"852.01086"	"1703.01445"	"1703.01775"	"-1.94"	"-0.00165"	"8/88"	"8"	"88"	"120373.060791016"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"84.2301"	"28821"	"28821"	"28801"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.9"	""	"19.7"	""	"14.7"	""	"11.4"	""	"15.3"	"19.2"	""	"740"	"57"	"35.000"	"28.000"	"7.34855119422227E-05"	""	"0"	"0.0001225"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INEWLTLVEK"	"[K].iNEWLTLVEk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"852.01086"	"1703.01445"	"1703.01438"	"0.04"	"0.00004"	"13/100"	"13"	"100"	"569232.50958252"	"HCD"	"MS2"	"27.59579"	"45.5"	"100.000"	"80.3535"	"27189"	"27189"	"27169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.5"	""	"53.3"	""	"65.4"	""	"73.6"	"2.0"	"89.4"	"84.8"	""	"740"	"47"	"35.000"	"28.000"	"0.000794697275428298"	"28"	"0"	"4.064E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQVLK"	"[R].lIDDMVAQVLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.6184"	"0.0000"	"1"	"1"	"1"	"852.01172"	"1703.01616"	"1703.01775"	"-0.93"	"-0.00079"	"10/88"	"10"	"88"	"2284358.41912842"	"HCD"	"MS2"	"0"	"163.8"	"100.000"	"83.8867"	"28681"	"28681"	"28663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.0"	""	"288.3"	""	"288.5"	""	"168.1"	""	"245.1"	"288.6"	""	"735"	"76"	"35.000"	"28.000"	"9.04185094524254E-07"	""	"0"	"4.106E-06"	"1.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQVLK"	"[R].lIDDMVAQVLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"852.01215"	"1703.01702"	"1703.01775"	"-0.43"	"-0.00037"	"6/88"	"6"	"88"	"131735.914794922"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"84.2188"	"28766"	"28766"	"28740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.2"	""	"15.6"	""	"21.2"	""	"10.0"	""	"13.5"	"20.8"	""	"735"	"36"	"35.000"	"28.000"	"0.00895895475750517"	"23"	"0.0002277"	"0.001231"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQVLK"	"[R].lIDDMVAQVLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"852.01215"	"1703.01702"	"1703.01775"	"-0.43"	"-0.00037"	"20/88"	"20"	"88"	"479583.143188477"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"83.5916"	"28561"	"28561"	"28539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.1"	""	"65.7"	""	"59.3"	""	"39.2"	"1.4"	"56.4"	"62.7"	""	"735"	"76"	"35.000"	"28.000"	"8.32256783040449E-07"	""	"0"	"1.308E-06"	"1.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQVLK"	"[R].lIDDMVAQVLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7439"	"0.0000"	"1"	"1"	"1"	"852.01215"	"1703.01702"	"1703.01775"	"-0.43"	"-0.00037"	"20/88"	"20"	"88"	"983600.420288086"	"HCD"	"MS2"	"0"	"76.4"	"100.000"	"83.5922"	"28510"	"28510"	"28492"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.2"	""	"134.2"	""	"136.4"	""	"82.4"	"0.2"	"120.5"	"135.1"	""	"735"	"82"	"35.000"	"28.000"	"2.22462771472063E-07"	""	"0"	"1.298E-06"	"1.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQVLK"	"[R].lIDDMVAQVLk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7403"	"0.0000"	"1"	"1"	"1"	"852.01221"	"1703.01714"	"1703.01775"	"-0.36"	"-0.00031"	"20/88"	"20"	"88"	"2171224.50231934"	"HCD"	"MS2"	"0"	"159.2"	"100.000"	"83.8891"	"28631"	"28631"	"28612"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.8"	""	"268.7"	""	"297.9"	""	"149.2"	"6.0"	"230.7"	"283.4"	""	"735"	"77"	"35.000"	"28.000"	"7.57281493126726E-07"	""	"0"	"4.645E-06"	"1.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVFQPVTELK"	"[R].aLVFQPVTELk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"568.35492"	"1703.05021"	"1703.05076"	"-0.33"	"-0.00019"	"11/94"	"11"	"94"	"2505948.76550293"	"HCD"	"MS2"	"26.49632"	"79.4"	"100.000"	"62.8280"	"20055"	"20055"	"20025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.3"	""	"83.3"	""	"107.5"	""	"106.7"	"0.4"	"138.2"	"229.5"	""	"480"	"52"	"33.000"	"26.000"	"0.000153536360515836"	"24"	"0.0001889"	"0.0004677"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVFQPVTELK"	"[R].aLVFQPVTELk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"568.35504"	"1703.05057"	"1703.05076"	"-0.11"	"-0.00006"	"11/94"	"11"	"94"	"2764114.68798828"	"HCD"	"MS2"	"22.66872"	"86.3"	"100.000"	"62.9118"	"20142"	"20142"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.6"	""	"88.3"	""	"108.5"	""	"114.3"	""	"154.4"	"250.0"	""	"480"	"41"	"33.000"	"26.000"	"0.00179560680122677"	"20"	"0.0001889"	"0.0004602"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVFQPVTELK"	"[R].aLVFQPVTELk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"0"	"2"	"2"	"0.7975"	"0.0000"	"1"	"1"	"1"	"852.02960"	"1703.05193"	"1703.05076"	"0.68"	"0.00058"	"10/94"	"10"	"94"	"1502552.83947754"	"HCD"	"MS2"	"0"	"95.3"	"100.000"	"62.8960"	"20135"	"20135"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.8"	""	"96.3"	""	"122.0"	""	"128.0"	"1.8"	"157.2"	"292.8"	""	"471"	"79"	"33.000"	"26.000"	"3.28088427093619E-07"	""	"0"	"4.544E-06"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVFQPVTELK"	"[R].aLVFQPVTELk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"852.03052"	"1703.05376"	"1703.05076"	"1.76"	"0.00150"	"11/94"	"11"	"94"	"1343556.35217285"	"HCD"	"MS2"	"0"	"97.1"	"100.000"	"62.7774"	"20034"	"20034"	"20009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.8"	""	"102.8"	""	"103.7"	""	"133.7"	""	"168.5"	"310.3"	""	"470"	"30"	"33.000"	"26.000"	"0.021881035073494"	"19"	"0.0001889"	"0.0004118"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPEnPPSMVFk.[Q]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"852.48438"	"1703.96147"	"1703.94425"	"10.11"	"0.00861"	"9/102"	"9"	"102"	"1441964.64562988"	"HCD"	"MS2"	"0"	"74.7"	"100.000"	"50.3789"	"15043"	"15043"	"15031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.2"	""	"44.0"	""	"46.2"	""	"88.4"	""	"222.1"	"233.5"	""	"1069"	"43"	"37.000"	"30.000"	"0.00257601097830631"	"19"	"0.001058"	"0.01415"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFFTTNLFLK"	"[R].dFFTTNLFLk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q566D0"	"Uroplakin-1b OS=Rattus norvegicus OX=10116 GN=Upk1b PE=2 SV=3"	"Q566D0"	"Uroplakin-1b OS=Rattus norvegicus OX=10116 GN=Upk1b PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"852.49243"	"1703.97759"	"1703.97726"	"0.19"	"0.00016"	"7/88"	"7"	"88"	"228689.092529297"	"HCD"	"MS2"	"0"	"18.9"	"100.000"	"78.6747"	"26556"	"26556"	"26527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.0"	""	"26.4"	""	"27.3"	""	"32.9"	""	"37.1"	"31.3"	""	"992"	"4"	"36.000"	"29.000"	"22.1045499205162"	"13"	"0.00103"	"0.01298"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDMDGIIVEK"	"[R].lLDMDGIIVEk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"0.5897"	"0.0000"	"1"	"1"	"1"	"568.67163"	"1704.00034"	"1704.00177"	"-0.84"	"-0.00048"	"11/94"	"11"	"94"	"857238.121032715"	"HCD"	"MS2"	"11.15542"	"39.5"	"100.000"	"70.9430"	"23360"	"23360"	"23331"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.1"	""	"52.1"	""	"55.5"	""	"54.1"	"1.1"	"78.4"	"78.2"	""	"911"	"39"	"36.000"	"29.000"	"0.00590865157933193"	""	"0.0001889"	"0.0006275"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDVIIMLVGNK"	"[R].gSDVIIMLVGNk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"0.8143"	"0.0000"	"1"	"1"	"1"	"852.50824"	"1704.00920"	"1704.01300"	"-2.23"	"-0.00190"	"17/92"	"17"	"92"	"500852.683166504"	"HCD"	"MS2"	"0"	"41.3"	"100.000"	"69.9726"	"23016"	"23016"	"22986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.5"	""	"55.2"	""	"55.4"	""	"57.7"	"0.2"	"91.2"	"79.4"	""	"848"	"70"	"36.000"	"29.000"	"3.9478973919836E-06"	""	"0"	"1.351E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDVIIMLVGNK"	"[R].gSDVIIMLVGNk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"568.67554"	"1704.01206"	"1704.01300"	"-0.55"	"-0.00031"	"9/92"	"9"	"92"	"3494226.48913574"	"HCD"	"MS2"	"33.93804"	"77.9"	"100.000"	"70.0327"	"23040"	"23040"	"23018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.0"	""	"110.5"	""	"123.7"	""	"115.7"	"1.0"	"143.3"	"145.9"	""	"832"	"30"	"36.000"	"29.000"	"0.0398192733658655"	"19"	"0"	"0.000122"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDVIIMLVGNK"	"[R].gSDVIIMLVGNk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"0.8902"	"0.0000"	"1"	"1"	"1"	"852.50970"	"1704.01213"	"1704.01300"	"-0.51"	"-0.00043"	"18/92"	"18"	"92"	"569227.270874023"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"70.1103"	"23020"	"23020"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.5"	""	"78.0"	""	"76.6"	""	"63.2"	"0.6"	"90.4"	"91.9"	""	"832"	"82"	"36.000"	"29.000"	"2.66743183859427E-07"	"26"	"0"	"4.775E-06"	"1.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTTQLIEQTK"	"[R].aLTTQLIEQTk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.9385"	"0.0000"	"1"	"1"	"1"	"852.51837"	"1704.02947"	"1704.03076"	"-0.76"	"-0.00065"	"18/106"	"18"	"106"	"480837.803466797"	"HCD"	"MS2"	"0"	"44.6"	"100.000"	"47.5152"	"13831"	"13831"	"13800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.7"	""	"51.6"	""	"55.3"	""	"77.2"	""	"89.8"	"88.3"	""	"675"	"65"	"35.000"	"28.000"	"1.0721949988443E-05"	"20"	"0"	"4.668E-06"	"1.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTTQLIEQTK"	"[R].aLTTQLIEQTk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"852.52118"	"1704.03508"	"1704.03076"	"2.54"	"0.00216"	"16/106"	"16"	"106"	"375965.307250977"	"HCD"	"MS2"	"0"	"35.2"	"100.000"	"47.8526"	"14017"	"14017"	"13986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.5"	""	"44.1"	"2.5"	"43.5"	""	"58.6"	"2.9"	"63.1"	"63.7"	""	"632"	"62"	"34.000"	"28.000"	"2.06865031005259E-05"	"21"	"0"	"4.897E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WELLQQVNTSTR"	"[K].wELLQqVNTSTR.[T]"	"N-Term(TMT6plex); Q6(Deamidated)"	"1"	"1"	"Q6IG01"	"Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1"	"Q6IG01"	"Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1"	"0"	"2"	"2"	"0.0800"	"0.0000"	"1"	"1"	"1"	"852.95807"	"1704.90886"	"1704.91182"	"-1.73"	"-0.00148"	"7/120"	"7"	"120"	"409288.682434082"	"HCD"	"MS2"	"100"	"34.7"	"100.000"	"59.2744"	"18657"	"18657"	"18629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.2"	""	"39.4"	""	"41.6"	""	"61.5"	""	"69.6"	"66.4"	""	"1038"	"25"	"37.000"	"30.000"	"0.147967848083453"	""	"0.0001889"	"0.0004843"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WELLQQVNTSTR"	"[K].wELLqQVNTSTR.[T]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"Q6IG01"	"Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1"	"Q6IG01"	"Keratin, type II cytoskeletal 1b OS=Rattus norvegicus OX=10116 GN=Krt77 PE=3 SV=1"	"0"	"2"	"2"	"0.0800"	"0.0000"	"1"	"2"	"2"	"852.95807"	"1704.90886"	"1704.91182"	"-1.73"	"-0.00148"	"8/120"	"8"	"120"	"409288.682434082"	"HCD"	"MS2"	"100"	"34.7"	"100.000"	"59.2744"	"18657"	"18657"	"18629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.2"	""	"39.4"	""	"41.6"	""	"61.5"	""	"69.6"	"66.4"	""	"1038"	"25"	"37.000"	"30.000"	"0.157821932832599"	""	"0.0001889"	"0.0008149"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEMEALVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"852.98090"	"1704.95452"	"1704.96063"	"-3.59"	"-0.00306"	"9/102"	"9"	"102"	"499435.996826172"	"HCD"	"MS2"	"0"	"46.1"	"100.000"	"61.7382"	"19663"	"19663"	"19635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.1"	""	"61.8"	""	"65.2"	""	"60.7"	"0.5"	"87.5"	"89.5"	""	"1106"	"43"	"37.000"	"30.000"	"0.00299037140588906"	"22"	"0"	"6.532E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEMEALVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"852.98273"	"1704.95818"	"1704.96063"	"-1.44"	"-0.00123"	"8/102"	"8"	"102"	"652232.26385498"	"HCD"	"MS2"	"13.1133"	"64.7"	"100.000"	"61.5355"	"19527"	"19527"	"19497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.5"	""	"81.5"	""	"91.3"	""	"87.5"	"0.0"	"117.3"	"139.9"	""	"1106"	"52"	"37.000"	"30.000"	"0.00032788770449274"	"25"	"0"	"2.731E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLDLSNVASYK"	"[K].hLDLSNVASYk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"568.99506"	"1704.97062"	"1704.96849"	"1.25"	"0.00071"	"13/102"	"13"	"102"	"7606580.63446045"	"HCD"	"MS2"	"13.40352"	"284.2"	"100.000"	"42.1958"	"11671"	"11671"	"11644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"403.0"	""	"367.1"	""	"384.3"	""	"453.6"	""	"549.0"	"537.4"	""	"1036"	"51"	"37.000"	"30.000"	"0.000408629540926411"	"16"	"0"	"2.02E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSAAFPSPIEK"	"[K].vTSAAFPSPIEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"569.00244"	"1704.99277"	"1704.99364"	"-0.51"	"-0.00029"	"12/106"	"12"	"106"	"11384750.1413574"	"HCD"	"MS2"	"20.08593"	"247.3"	"100.000"	"48.9550"	"14467"	"14467"	"14447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"435.7"	""	"360.6"	""	"327.6"	""	"358.9"	""	"409.1"	"450.2"	""	"965"	"43"	"36.000"	"29.000"	"0.00244623016742545"	"23"	"0"	"9.797E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSAAFPSPIEK"	"[K].vTSAAFPSPIEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"569.00256"	"1704.99314"	"1704.99364"	"-0.30"	"-0.00017"	"14/106"	"14"	"106"	"16012348.331543"	"HCD"	"MS2"	"5.137417"	"160.2"	"41.269"	"48.9508"	"14418"	"14418"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"242.0"	""	"214.6"	""	"231.5"	""	"238.4"	"3.7"	"274.2"	"312.9"	""	"962"	"51"	"36.000"	"29.000"	"0.000388280049549691"	"21"	"0"	"6.046E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSAAFPSPIEK"	"[K].vTSAAFPSPIEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"569.00256"	"1704.99314"	"1704.99364"	"-0.30"	"-0.00017"	"11/106"	"11"	"106"	"9324566.33148193"	"HCD"	"MS2"	"18.90355"	"229.9"	"100.000"	"48.6635"	"14301"	"14301"	"14271"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"383.8"	""	"318.3"	""	"320.2"	""	"357.8"	""	"382.2"	"413.0"	""	"962"	"35"	"36.000"	"29.000"	"0.0139041702341779"	"19"	"0"	"8.541E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSAAFPSPIEK"	"[K].vTSAAFPSPIEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"853.00024"	"1704.99321"	"1704.99364"	"-0.25"	"-0.00022"	"8/106"	"8"	"106"	"1383703.37994385"	"HCD"	"MS2"	"0"	"99.6"	"100.000"	"49.3180"	"14616"	"14616"	"14590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.4"	""	"132.6"	""	"128.0"	""	"159.9"	"0.5"	"170.9"	"196.1"	""	"962"	"60"	"36.000"	"29.000"	"4.44779821664285E-05"	"26"	"0"	"2.233E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSAAFPSPIEK"	"[K].vTSAAFPSPIEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.8281"	"0.0000"	"1"	"1"	"1"	"853.00073"	"1704.99419"	"1704.99364"	"0.32"	"0.00027"	"8/106"	"8"	"106"	"1540315.8493042"	"HCD"	"MS2"	"0"	"106.0"	"100.000"	"49.0384"	"14454"	"14454"	"14431"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.5"	""	"132.1"	""	"142.4"	""	"166.2"	""	"177.8"	"209.1"	""	"934"	"64"	"36.000"	"29.000"	"1.88068855029989E-05"	"28"	"0"	"6.644E-06"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSAAFPSPIEK"	"[K].vTSAAFPSPIEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"853.00079"	"1704.99431"	"1704.99364"	"0.39"	"0.00033"	"15/106"	"15"	"106"	"3959013.87304688"	"HCD"	"MS2"	"0"	"231.0"	"100.000"	"48.6958"	"14314"	"14314"	"14287"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"424.1"	""	"355.3"	""	"327.1"	""	"318.2"	""	"352.4"	"412.9"	""	"940"	"47"	"36.000"	"29.000"	"0.000863173021373723"	"18"	"0"	"2.45E-05"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSAAFPSPIEK"	"[K].vTSAAFPSPIEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.8154"	"0.0000"	"1"	"1"	"1"	"853.00092"	"1704.99455"	"1704.99364"	"0.53"	"0.00046"	"8/106"	"8"	"106"	"5353592.66967773"	"HCD"	"MS2"	"0"	"313.0"	"100.000"	"49.0008"	"14486"	"14486"	"14463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"601.7"	""	"430.1"	""	"437.2"	""	"427.2"	"4.8"	"473.7"	"583.1"	""	"936"	"65"	"36.000"	"29.000"	"1.5249157606894E-05"	"28"	"0"	"2.07E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSAAFPSPIEK"	"[K].vTSAAFPSPIEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"569.00323"	"1704.99515"	"1704.99364"	"0.88"	"0.00050"	"13/106"	"13"	"106"	"12855800.8302002"	"HCD"	"MS2"	"10.2659"	"177.4"	"55.104"	"49.2674"	"14595"	"14595"	"14574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.6"	""	"235.6"	""	"242.2"	""	"275.7"	""	"305.5"	"342.3"	""	"924"	"38"	"36.000"	"29.000"	"0.00661670809464377"	"23"	"0"	"8.331E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFINLEAAGVGGK"	"[R].aFINLEAAGVGGk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"Q6UPR8"	"Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Ermp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"853.00385"	"1705.00041"	"1705.00488"	"-2.62"	"-0.00223"	"18/114"	"18"	"114"	"1005167.90307617"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"56.7100"	"17560"	"17560"	"17531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.6"	""	"81.7"	""	"70.9"	""	"121.6"	"2.1"	"122.5"	"132.4"	""	"888"	"30"	"36.000"	"29.000"	"0.0439929383532388"	"16"	"0"	"8.66E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDYVFSFDK"	"[R].lNDYVFSFDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"853.46210"	"1705.91692"	"1705.92014"	"-1.89"	"-0.00161"	"16/100"	"16"	"100"	"1138253.75842285"	"HCD"	"MS2"	"0"	"114.4"	"100.000"	"67.0427"	"21776"	"21776"	"21753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.4"	""	"142.1"	""	"153.2"	""	"192.0"	"1.4"	"196.2"	"217.2"	""	"1111"	"58"	"37.000"	"30.000"	"8.86510866290004E-05"	"23"	"0"	"1.675E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDYVFSFDK"	"[R].lNDYVFSFDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"853.46216"	"1705.91704"	"1705.92014"	"-1.82"	"-0.00155"	"14/100"	"14"	"100"	"1083923.53094482"	"HCD"	"MS2"	"100"	"108.7"	"100.000"	"67.0141"	"21817"	"21817"	"21795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.3"	""	"150.4"	""	"145.4"	""	"174.0"	""	"194.4"	"205.7"	""	"1109"	"36"	"37.000"	"30.000"	"0.0155919901045621"	"23"	"0"	"0.0001452"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDYVFSFDK"	"[R].lNDYVFSFDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"569.31061"	"1705.91727"	"1705.92014"	"-1.68"	"-0.00096"	"7/100"	"7"	"100"	"2931823.69366455"	"HCD"	"MS2"	"41.09661"	"98.6"	"100.000"	"66.9775"	"21802"	"21802"	"21779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.6"	""	"112.1"	""	"114.4"	""	"170.6"	""	"218.1"	"208.3"	""	"1106"	"34"	"37.000"	"30.000"	"0.0202173919762058"	"20"	"0.0001308"	"0.0002064"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDYVFSFDK"	"[R].lNDYVFSFDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"569.31128"	"1705.91928"	"1705.92014"	"-0.50"	"-0.00029"	"10/100"	"10"	"100"	"2631449.94628906"	"HCD"	"MS2"	"55.2879"	"94.2"	"100.000"	"67.0198"	"21767"	"21767"	"21737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.1"	""	"98.7"	""	"111.3"	""	"183.5"	""	"208.7"	"195.5"	""	"1132"	"35"	"37.000"	"30.000"	"0.0198983209339017"	"21"	"0.0001889"	"0.0004656"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGTLSGWTSPK"	"[K].lTGTLSGWTSPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9324"	"0.0000"	"1"	"1"	"1"	"853.49603"	"1705.98479"	"1705.98889"	"-2.41"	"-0.00205"	"11/104"	"11"	"104"	"1729374.10369873"	"HCD"	"MS2"	"0"	"139.7"	"100.000"	"53.4041"	"16219"	"16219"	"16210"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.0"	""	"221.4"	""	"213.4"	""	"178.6"	"1.2"	"211.3"	"223.2"	""	"968"	"74"	"36.000"	"29.000"	"1.81905303675607E-06"	"22"	"0"	"5.466E-06"	"1.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGTLSGWTSPK"	"[K].lTGTLSGWTSPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9155"	"0.0000"	"1"	"1"	"1"	"853.49609"	"1705.98491"	"1705.98889"	"-2.33"	"-0.00199"	"11/104"	"11"	"104"	"1666868.58837891"	"HCD"	"MS2"	"0"	"141.5"	"100.000"	"53.5945"	"16349"	"16349"	"16340"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"265.4"	""	"224.1"	""	"219.5"	""	"200.0"	"0.5"	"215.4"	"211.0"	""	"968"	"71"	"36.000"	"29.000"	"3.49820584943451E-06"	"23"	"0"	"3.02E-06"	"1.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGTLSGWTSPK"	"[K].lTGTLSGWTSPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"853.49615"	"1705.98503"	"1705.98889"	"-2.26"	"-0.00193"	"20/104"	"20"	"104"	"1465825.97442627"	"HCD"	"MS2"	"0"	"120.7"	"100.000"	"53.8829"	"16460"	"16460"	"16446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"210.4"	""	"190.1"	""	"182.1"	""	"148.7"	"1.4"	"202.5"	"206.4"	""	"956"	"63"	"36.000"	"29.000"	"2.20509800639861E-05"	"23"	"0"	"3.763E-06"	"1.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGTLSGWTSPK"	"[K].lTGTLSGWTSPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"569.33331"	"1705.98539"	"1705.98889"	"-2.06"	"-0.00117"	"11/104"	"11"	"104"	"3725436.52709961"	"HCD"	"MS2"	"0"	"109.7"	"100.000"	"53.9402"	"16483"	"16483"	"16468"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.2"	""	"154.3"	""	"153.0"	""	"158.4"	"1.9"	"198.9"	"195.7"	""	"956"	"42"	"36.000"	"29.000"	"0.00272538522150198"	"22"	"0"	"3.074E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGTLSGWTSPK"	"[K].lTGTLSGWTSPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"853.49701"	"1705.98674"	"1705.98889"	"-1.26"	"-0.00108"	"11/104"	"11"	"104"	"1204040.91796875"	"HCD"	"MS2"	"0"	"99.2"	"100.000"	"53.6996"	"16333"	"16333"	"16318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.2"	""	"144.9"	""	"160.9"	""	"128.1"	""	"159.5"	"172.5"	""	"947"	"74"	"36.000"	"29.000"	"1.90686515753105E-06"	"23"	"0"	"2.058E-06"	"1.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGTLSGWTSPK"	"[K].lTGTLSGWTSPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"569.33405"	"1705.98758"	"1705.98889"	"-0.77"	"-0.00044"	"9/104"	"9"	"104"	"3400208.38793945"	"HCD"	"MS2"	"0"	"100.7"	"100.000"	"53.7547"	"16355"	"16355"	"16339"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.4"	""	"135.5"	""	"144.8"	""	"151.4"	"3.0"	"176.4"	"187.6"	""	"933"	"34"	"36.000"	"29.000"	"0.0172128049732975"	"24"	"0"	"3.358E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGTLSGWTSPK"	"[K].lTGTLSGWTSPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"569.33496"	"1705.99033"	"1705.98889"	"0.84"	"0.00048"	"10/104"	"10"	"104"	"10014494.0806885"	"HCD"	"MS2"	"42.82442"	"235.7"	"92.456"	"53.4362"	"16231"	"16231"	"16221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.0"	""	"321.4"	""	"325.8"	""	"349.3"	"5.3"	"423.1"	"434.1"	""	"895"	"29"	"36.000"	"29.000"	"0.0583167133357404"	"20"	"0"	"4.304E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGTLSGWTSPK"	"[K].lTGTLSGWTSPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"569.33502"	"1705.99051"	"1705.98889"	"0.95"	"0.00054"	"12/104"	"12"	"104"	"9018956.86517334"	"HCD"	"MS2"	"11.00753"	"246.9"	"100.000"	"53.6333"	"16364"	"16364"	"16355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"394.7"	""	"373.7"	""	"321.7"	""	"377.8"	"0.3"	"429.2"	"439.7"	""	"895"	"22"	"36.000"	"29.000"	"0.297709737400279"	"16"	"0"	"0.0001244"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLWPFLIDK"	"[K].eSLWPFLIDk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"853.49921"	"1705.99114"	"1705.99291"	"-1.04"	"-0.00089"	"12/88"	"12"	"88"	"345150.245239258"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"80.9757"	"27494"	"27494"	"27470"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.2"	""	"32.3"	""	"38.9"	""	"42.9"	"1.3"	"38.6"	"39.3"	""	"900"	"42"	"36.000"	"29.000"	"0.00291885495096707"	"28"	"0.0001889"	"0.0004791"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLWPFLIDK"	"[K].eSLWPFLIDk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"853.49969"	"1705.99211"	"1705.99291"	"-0.47"	"-0.00040"	"5/88"	"5"	"88"	"120008.823913574"	"HCD"	"MS2"	"22.87721"	"10.9"	"100.000"	"81.2668"	"27562"	"27562"	"27536"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.4"	""	"12.7"	""	"16.6"	""	"21.0"	"1.5"	"18.5"	"16.9"	""	"898"	"7"	"36.000"	"29.000"	"8.28411923211584"	"15"	"0.009489"	"0.4232"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLWPFLIDK"	"[K].eSLWPFLIDk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"0"	"3"	"3"	"0.6042"	"0.0000"	"1"	"1"	"1"	"569.33569"	"1705.99253"	"1705.99291"	"-0.23"	"-0.00013"	"12/88"	"12"	"88"	"930894.592041016"	"HCD"	"MS2"	"20.47603"	"31.4"	"100.000"	"80.9780"	"27495"	"27495"	"27470"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.9"	""	"37.4"	""	"45.3"	""	"46.2"	"0.1"	"47.8"	"80.2"	""	"889"	"48"	"36.000"	"29.000"	"0.000643979088900647"	""	"0.0001308"	"0.0002664"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLWPFLIDK"	"[K].eSLWPFLIDk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"569.33582"	"1705.99289"	"1705.99291"	"-0.01"	"-0.00001"	"12/88"	"12"	"88"	"705136.823425293"	"HCD"	"MS2"	"11.66431"	"24.4"	"100.000"	"80.9877"	"27448"	"27448"	"27424"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.8"	""	"37.2"	""	"33.3"	""	"37.7"	""	"44.3"	"45.6"	""	"875"	"33"	"36.000"	"29.000"	"0.0197232308236889"	"25"	"0.0001889"	"0.0005724"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLWPFLIDK"	"[K].eSLWPFLIDk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"Q5U2R0"	"Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"853.50073"	"1705.99419"	"1705.99291"	"0.75"	"0.00064"	"12/88"	"12"	"88"	"280252.515869141"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"80.9554"	"27435"	"27435"	"27408"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"31.6"	""	"29.0"	""	"37.3"	"0.5"	"38.5"	"39.3"	""	"866"	"32"	"36.000"	"29.000"	"0.0276368089520508"	"24"	"0.0001889"	"0.0006445"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVDWLTEK"	"[R].kVDWLTEk.[M]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q3B8Q2; Q5RKI1"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1; Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"1"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"853.52539"	"1706.04350"	"1706.04557"	"-1.21"	"-0.00103"	"6/78"	"6"	"78"	"874445.629882813"	"HCD"	"MS2"	"0"	"90.9"	"100.000"	"42.0175"	"11645"	"11645"	"11618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.8"	""	"109.7"	""	"117.1"	""	"155.3"	"1.9"	"171.3"	"174.6"	""	"444"	"37"	"33.000"	"26.000"	"0.00410537633413134"	"17"	"0.0001889"	"0.0005033"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVDWLTEK"	"[R].kVDWLTEk.[M]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q3B8Q2; Q5RKI1"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1; Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.35297"	"1706.04435"	"1706.04557"	"-0.72"	"-0.00041"	"4/78"	"4"	"78"	"34268885.0728149"	"HCD"	"MS2"	"34.38634"	"1447.1"	"79.210"	"41.9351"	"11611"	"11611"	"11586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2205.1"	""	"1808.8"	""	"1913.3"	""	"2345.0"	"6.0"	"2678.8"	"2754.8"	""	"443"	"14"	"33.000"	"26.000"	"0.912796004800586"	"13"	"0.0002277"	"0.001335"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVDWLTEK"	"[R].kVDWLTEk.[M]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q3B8Q2; Q5RKI1"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1; Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.35321"	"1706.04508"	"1706.04557"	"-0.29"	"-0.00016"	"4/78"	"4"	"78"	"35592530.9151001"	"HCD"	"MS2"	"15.89581"	"1239.0"	"58.343"	"41.7102"	"11475"	"11475"	"11451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1912.7"	""	"1538.0"	""	"1617.4"	""	"1998.5"	"10.4"	"2304.3"	"2358.8"	""	"439"	"14"	"33.000"	"26.000"	"0.949367859121843"	"13"	"0.0002277"	"0.001354"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDYVFSFDK"	"[R].lnDYVFSFDk.[M]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"853.96313"	"1706.91899"	"1706.90416"	"8.69"	"0.00742"	"8/100"	"8"	"100"	"762702.934997559"	"HCD"	"MS2"	"0"	"75.6"	"100.000"	"67.2030"	"21840"	"21840"	"21821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.1"	""	"90.9"	""	"110.2"	""	"120.6"	""	"148.9"	"148.7"	""	"1139"	"30"	"37.000"	"30.000"	"0.053026593507893"	"21"	"0.004819"	"0.1419"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPDLLTMVVDYR"	"[R].rPDLLTMVVDYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U318"	"Astrocytic phosphoprotein PEA-15 OS=Rattus norvegicus OX=10116 GN=Pea15 PE=1 SV=1"	"Q5U318"	"Astrocytic phosphoprotein PEA-15 OS=Rattus norvegicus OX=10116 GN=Pea15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.65356"	"1706.94614"	"1706.94609"	"0.03"	"0.00002"	"8/124"	"8"	"124"	"2883709.58422852"	"HCD"	"MS2"	"16.19889"	"66.6"	"100.000"	"57.6815"	"17957"	"17957"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.4"	""	"96.6"	""	"94.8"	""	"87.0"	"3.6"	"119.5"	"120.4"	""	"1138"	"27"	"37.000"	"30.000"	"0.113008800797634"	"14"	"0"	"4.357E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPDLLTMVVDYR"	"[R].rPDLLTMVVDYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U318"	"Astrocytic phosphoprotein PEA-15 OS=Rattus norvegicus OX=10116 GN=Pea15 PE=1 SV=1"	"Q5U318"	"Astrocytic phosphoprotein PEA-15 OS=Rattus norvegicus OX=10116 GN=Pea15 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"569.65356"	"1706.94614"	"1706.94609"	"0.03"	"0.00002"	"8/124"	"8"	"124"	"3639113.15136719"	"HCD"	"MS2"	"19.78023"	"59.6"	"100.000"	"57.6848"	"18012"	"18012"	"17989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.7"	"2.6"	"78.9"	""	"88.6"	""	"84.3"	"1.6"	"99.6"	"114.0"	""	"1138"	"45"	"37.000"	"30.000"	"0.00181598503955233"	"22"	"0"	"7.564E-06"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFYEAFSK"	"[K].kFYEAFSk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"569.67419"	"1707.00803"	"1707.00845"	"-0.25"	"-0.00014"	"5/76"	"5"	"76"	"8024341.71057129"	"HCD"	"MS2"	"46.41111"	"551.9"	"100.000"	"41.8525"	"11577"	"11577"	"11554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"873.3"	""	"785.6"	""	"881.0"	""	"871.1"	""	"878.2"	"928.2"	""	"747"	"16"	"35.000"	"28.000"	"0.875569462521992"	"16"	"0.0004166"	"0.002346"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFYEAFSK"	"[K].kFYEAFSk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.67456"	"1707.00913"	"1707.00845"	"0.39"	"0.00022"	"7/76"	"7"	"76"	"9083532.74804688"	"HCD"	"MS2"	"41.23235"	"623.8"	"100.000"	"41.6276"	"11441"	"11441"	"11419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"969.6"	""	"875.9"	""	"953.5"	""	"983.3"	""	"1064.7"	"1056.9"	""	"746"	"5"	"35.000"	"28.000"	"11.5533739860778"	"13"	"0.000523"	"0.003229"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAYTTVLQEWLR"	"[K].vAYTTVLQEWLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"854.48425"	"1707.96123"	"1707.96312"	"-1.11"	"-0.00095"	"11/106"	"11"	"106"	"370913.753295898"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"79.9162"	"27062"	"27062"	"27039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.9"	""	"26.1"	""	"38.8"	""	"34.7"	""	"37.3"	"43.6"	""	"1007"	"48"	"37.000"	"30.000"	"0.000774460861392577"	"17"	"0"	"4.855E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAYTTVLQEWLR"	"[K].vAYTTVLQEWLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.48462"	"1707.96196"	"1707.96312"	"-0.68"	"-0.00058"	"8/106"	"8"	"106"	"430889.744262695"	"HCD"	"MS2"	"24.66857"	"26.8"	"100.000"	"79.9723"	"27034"	"27034"	"27009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.0"	""	"38.4"	""	"45.3"	""	"44.9"	""	"44.7"	"48.6"	""	"998"	"31"	"36.000"	"29.000"	"0.0439643387630998"	"14"	"7.476E-05"	"0.0002038"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAYTTVLQEWLR"	"[K].vAYTTVLQEWLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.99225"	"1707.96219"	"1707.96312"	"-0.54"	"-0.00031"	"13/106"	"13"	"106"	"1537457.26678467"	"HCD"	"MS2"	"33.44648"	"39.2"	"100.000"	"79.9601"	"27080"	"27080"	"27055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.6"	""	"46.5"	""	"55.2"	""	"60.3"	""	"82.3"	"82.6"	""	"998"	"19"	"36.000"	"29.000"	"0.645803724883543"	"14"	"0.0001889"	"0.000569"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQEALAQLLKTK"	"[R].hVQEALAQLLKTK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ET61"	"Complement component C1q receptor OS=Rattus norvegicus OX=10116 GN=Cd93 PE=1 SV=1"	"Q9ET61"	"Complement component C1q receptor OS=Rattus norvegicus OX=10116 GN=Cd93 PE=1 SV=1"	"1"	"3"	"3"	"0.0750"	"0.0000"	"1"	"1"	"1"	"570.02155"	"1708.05008"	"1708.03187"	"10.66"	"0.00607"	"8/132"	"8"	"132"	"8159982.35595703"	"HCD"	"MS2"	"22.80834"	"203.3"	"100.000"	"52.4070"	"15872"	"15872"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.8"	""	"252.0"	""	"273.1"	""	"346.5"	""	"414.8"	"422.7"	""	"385"	"40"	"32.000"	"25.000"	"0.00196530850613728"	""	"0.0003839"	"0.001853"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQEALAQLLKTK"	"[R].hVQEALAQLLKTK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ET61"	"Complement component C1q receptor OS=Rattus norvegicus OX=10116 GN=Cd93 PE=1 SV=1"	"Q9ET61"	"Complement component C1q receptor OS=Rattus norvegicus OX=10116 GN=Cd93 PE=1 SV=1"	"1"	"3"	"3"	"0.0750"	"0.0000"	"1"	"1"	"1"	"570.02167"	"1708.05045"	"1708.03187"	"10.88"	"0.00619"	"8/132"	"8"	"132"	"7657391.50848389"	"HCD"	"MS2"	"23.77652"	"202.9"	"100.000"	"52.2043"	"15739"	"15739"	"15714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.4"	""	"244.0"	""	"271.2"	""	"374.7"	""	"397.0"	"414.1"	""	"385"	"40"	"32.000"	"25.000"	"0.00178414741000525"	""	"0.0005564"	"0.003464"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGYTPDWIFLLR"	"[K].vGYTPDWIFLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.98413"	"1708.96099"	"1708.96239"	"-0.82"	"-0.00070"	"6/92"	"6"	"92"	"194451.108032227"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"87.3128"	"30068"	"30068"	"30047"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.0"	""	"12.8"	""	"13.5"	""	"20.6"	"2.0"	"23.0"	"25.0"	""	"1056"	"23"	"37.000"	"30.000"	"0.283552788483493"	"14"	"0.0004166"	"0.002286"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGYTPDWIFLLR"	"[K].vGYTPDWIFLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"854.98462"	"1708.96196"	"1708.96239"	"-0.25"	"-0.00022"	"9/92"	"9"	"92"	"117573.257019043"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"87.8631"	"30277"	"30277"	"30269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.8"	""	"10.5"	""	"10.4"	""	"17.9"	""	"16.3"	"19.8"	""	"1047"	"11"	"37.000"	"30.000"	"4.50730229268638"	"14"	"0.0006037"	"0.004793"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGYTPDWIFLLR"	"[K].vGYTPDWIFLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"854.98468"	"1708.96208"	"1708.96239"	"-0.18"	"-0.00016"	"10/92"	"10"	"92"	"1257975.71270752"	"HCD"	"MS2"	"0.746833"	"60.8"	"100.000"	"87.5855"	"30175"	"30175"	"30169"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.2"	""	"79.4"	""	"66.0"	""	"116.0"	"0.3"	"126.0"	"131.8"	""	"1040"	"38"	"37.000"	"30.000"	"0.00737909911278328"	"17"	"0"	"0.0001111"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGYTPDWIFLLR"	"[K].vGYTPDWIFLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.98499"	"1708.96269"	"1708.96239"	"0.18"	"0.00015"	"4/92"	"4"	"92"	"107191.284790039"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"87.7882"	"30199"	"30199"	"30183"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"6.7"	""	"13.4"	""	"9.9"	"1.5"	"13.9"	"18.0"	""	"1040"	"8"	"37.000"	"30.000"	"8.43341250626643"	"13"	"0.002361"	"0.03465"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGYTPDWIFLLR"	"[K].vGYTPDWIFLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.98511"	"1708.96294"	"1708.96239"	"0.32"	"0.00027"	"10/92"	"10"	"92"	"1262250.66882324"	"HCD"	"MS2"	"1.36468"	"67.5"	"100.000"	"87.5043"	"30092"	"30092"	"30088"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.7"	""	"78.1"	""	"68.2"	""	"136.8"	"1.9"	"129.6"	"153.9"	""	"1034"	"39"	"37.000"	"30.000"	"0.00718605510337304"	"15"	"0"	"0.0001015"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGYTPDWIFLLR"	"[K].vGYTPDWIFLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.98547"	"1708.96367"	"1708.96239"	"0.75"	"0.00064"	"13/92"	"13"	"92"	"291709.137817383"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"87.2471"	"29990"	"29990"	"29967"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.5"	""	"17.7"	""	"20.5"	""	"34.3"	""	"28.2"	"33.7"	""	"1023"	"24"	"37.000"	"30.000"	"0.207895762868006"	"14"	"0.0006737"	"0.006694"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLSWLLPPQER"	"[R].iQLSWLLPPQER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.00006"	"1708.99285"	"1708.99476"	"-1.12"	"-0.00096"	"6/122"	"6"	"122"	"128888.119934082"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"75.5511"	"25293"	"25293"	"25263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.1"	""	"15.0"	""	"19.9"	""	"15.4"	""	"18.2"	"19.5"	""	"810"	"24"	"36.000"	"29.000"	"0.163853236137464"	"14"	"0.0001889"	"0.0008924"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEAMTNSK"	"[R].kLEAMTNSk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.34448"	"1709.01889"	"1709.02345"	"-2.67"	"-0.00152"	"11/90"	"11"	"90"	"9541842.94012451"	"HCD"	"MS2"	"4.626738"	"591.8"	"100.000"	"32.1567"	"7572"	"7572"	"7549"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1155.2"	""	"861.3"	""	"845.9"	""	"780.6"	"0.7"	"949.5"	"998.9"	""	"601"	"28"	"34.000"	"27.000"	"0.0522209149039187"	"14"	"0"	"0.0001613"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEAMTNSK"	"[R].kLEAMTNSk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.34521"	"1709.02109"	"1709.02345"	"-1.38"	"-0.00079"	"7/90"	"7"	"90"	"17029197.4498291"	"HCD"	"MS2"	"11.9382"	"1090.0"	"100.000"	"32.3071"	"7676"	"7676"	"7657"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2137.8"	""	"1602.8"	""	"1583.2"	""	"1454.2"	""	"1675.4"	"1845.7"	""	"575"	"25"	"34.000"	"27.000"	"0.086225922420895"	"14"	"0"	"0.0001556"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEAMTNSK"	"[R].kLEAMTNSk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"1"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"855.01477"	"1709.02226"	"1709.02345"	"-0.70"	"-0.00059"	"13/90"	"13"	"90"	"738785.04901123"	"HCD"	"MS2"	"0"	"77.7"	"100.000"	"32.3646"	"7700"	"7700"	"7670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.4"	""	"106.6"	""	"123.9"	""	"92.2"	"3.2"	"114.9"	"128.3"	""	"574"	"38"	"34.000"	"27.000"	"0.0045069412484373"	"15"	"0.0001859"	"0.0003204"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEAMTNSK"	"[R].kLEAMTNSk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"1"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"855.01477"	"1709.02226"	"1709.02345"	"-0.70"	"-0.00059"	"13/90"	"13"	"90"	"708909.772338867"	"HCD"	"MS2"	"0"	"71.6"	"100.000"	"32.2418"	"7607"	"7607"	"7576"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.2"	""	"99.1"	""	"108.7"	""	"83.1"	"2.5"	"112.0"	"120.0"	""	"574"	"35"	"34.000"	"27.000"	"0.00907573688468326"	"16"	"0.0001308"	"0.0002501"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDASFFGVHPK"	"[K].fDASFFGVHPk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"570.65125"	"1709.93918"	"1709.94155"	"-1.38"	"-0.00079"	"9/84"	"9"	"84"	"21680863.2194214"	"HCD"	"MS2"	"7.801645"	"496.2"	"88.085"	"54.8581"	"16856"	"16856"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"761.6"	""	"593.3"	""	"731.5"	""	"829.5"	"1.9"	"759.4"	"1018.2"	""	"1066"	"46"	"37.000"	"30.000"	"0.00120150950007724"	"18"	"0"	"3.273E-06"	"1.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDASFFGVHPK"	"[K].fDASFFGVHPk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9038"	"0.0000"	"1"	"1"	"1"	"570.65161"	"1709.94028"	"1709.94155"	"-0.74"	"-0.00042"	"9/84"	"9"	"84"	"7581429.00146484"	"HCD"	"MS2"	"4.833386"	"204.4"	"90.366"	"55.1637"	"16982"	"16982"	"16965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"297.3"	""	"249.6"	""	"297.7"	""	"344.6"	"3.0"	"324.3"	"418.1"	""	"1053"	"52"	"37.000"	"30.000"	"0.000328396390881494"	"21"	"0"	"3.236E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNHFIAEFK"	"[R].mVNHFIAEFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"570.65161"	"1709.94028"	"1709.94492"	"-2.71"	"-0.00155"	"9/86"	"9"	"86"	"11911406.8857422"	"HCD"	"MS2"	"3.342766"	"246.2"	"64.020"	"43.8324"	"12379"	"12379"	"12359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"283.5"	""	"316.9"	""	"347.1"	""	"544.8"	""	"433.6"	"407.2"	""	"1053"	"20"	"37.000"	"30.000"	"0.531371644519374"	"19"	"0.0004557"	"0.002569"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNHFIAEFK"	"[R].mVNHFIAEFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.65167"	"1709.94046"	"1709.94492"	"-2.61"	"-0.00149"	"9/86"	"9"	"86"	"10775719.668335"	"HCD"	"MS2"	"34.4922"	"231.5"	"69.815"	"43.4910"	"12240"	"12240"	"12223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"258.6"	""	"270.7"	""	"331.6"	""	"562.6"	"8.6"	"376.8"	"382.8"	""	"1052"	"28"	"37.000"	"30.000"	"0.0905702870442641"	"14"	"0.0001889"	"0.0007199"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDASFFGVHPK"	"[K].fDASFFGVHPk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"570.65173"	"1709.94065"	"1709.94155"	"-0.53"	"-0.00030"	"10/84"	"10"	"84"	"8211679.59545898"	"HCD"	"MS2"	"4.721319"	"232.1"	"100.000"	"54.9644"	"16846"	"16846"	"16828"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"326.7"	""	"287.4"	""	"349.8"	""	"376.6"	""	"392.8"	"465.3"	""	"1075"	"59"	"37.000"	"30.000"	"7.52278185882783E-05"	"24"	"0"	"3.423E-06"	"1.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDASFFGVHPK"	"[K].fDASFFGVHPk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"570.65192"	"1709.94120"	"1709.94155"	"-0.21"	"-0.00012"	"9/84"	"9"	"84"	"17215796.5598755"	"HCD"	"MS2"	"12.14782"	"441.4"	"100.000"	"54.6634"	"16723"	"16723"	"16704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"656.9"	""	"558.3"	""	"658.2"	""	"730.4"	"5.8"	"681.6"	"885.8"	""	"1064"	"49"	"37.000"	"30.000"	"0.00073267543745158"	"19"	"0"	"6.374E-06"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNHFIAEFK"	"[R].mVNHFIAEFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.65192"	"1709.94120"	"1709.94492"	"-2.18"	"-0.00124"	"6/86"	"6"	"86"	"13064160.9868164"	"HCD"	"MS2"	"78.98038"	"340.3"	"90.586"	"43.2409"	"12089"	"12089"	"12076"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"418.4"	""	"415.7"	""	"443.5"	""	"767.1"	"11.1"	"590.4"	"576.9"	""	"1064"	"14"	"37.000"	"30.000"	"2.37089124147472"	"13"	"0.0003146"	"0.001444"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVSDTFNKWTR"	"[R].iLVSDTFnKWTR.[I]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P58751"	"Reelin OS=Rattus norvegicus OX=10116 GN=Reln PE=2 SV=1"	"P58751"	"Reelin OS=Rattus norvegicus OX=10116 GN=Reln PE=2 SV=1"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"855.47559"	"1709.94390"	"1709.94239"	"0.88"	"0.00075"	"3/110"	"3"	"110"	"77543.0958251953"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"87.0836"	"29924"	"29924"	"29900"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.7"	""	"5.6"	""	"8.4"	""	"8.3"	""	"8.6"	"11.6"	""	"1037"	"1"	"37.000"	"30.000"	"40.8083241956909"	"13"	"0.008495"	"0.3592"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLVNSMNTVK"	"[R].vmLVNSMNTVk.[E]"	"N-Term(TMT6plex); M2(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"855.48724"	"1709.96721"	"1709.96942"	"-1.29"	"-0.00110"	"10/98"	"10"	"98"	"1209208.35772705"	"HCD"	"MS2"	"100"	"103.7"	"100.000"	"43.7108"	"12330"	"12330"	"12302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.9"	""	"153.4"	""	"136.2"	""	"256.0"	""	"157.2"	"158.6"	""	"919"	"31"	"36.000"	"29.000"	"0.0336732872977326"	""	"0.0001889"	"0.000902"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLVNSMNTVK"	"[R].vmLVNSMNTVk.[E]"	"N-Term(TMT6plex); M2(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3214"	"0.0000"	"1"	"1"	"1"	"855.48914"	"1709.97099"	"1709.96942"	"0.92"	"0.00079"	"15/98"	"15"	"98"	"939357.530090332"	"HCD"	"MS2"	"0"	"82.8"	"100.000"	"43.4996"	"12195"	"12195"	"12171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.0"	""	"104.0"	""	"113.1"	""	"197.9"	"0.5"	"133.9"	"146.2"	""	"888"	"28"	"36.000"	"29.000"	"0.0706940674810719"	""	"0.0001859"	"0.0003713"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKLEATITEFA"	"[K].ekLEATITEFA.[-]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.49036"	"1709.97344"	"1709.97257"	"0.50"	"0.00043"	"7/96"	"7"	"96"	"957458.440002441"	"HCD"	"MS2"	"0"	"40.5"	"100.000"	"61.2494"	"19410"	"19410"	"19385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.2"	""	"56.8"	""	"51.7"	""	"73.8"	""	"76.8"	"75.9"	""	"876"	"49"	"36.000"	"29.000"	"0.00050637716208014"	"16"	"0.006441"	"0.231"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYQTIEIPPK"	"[R].yYQTIEIPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"855.49518"	"1709.98308"	"1709.98783"	"-2.78"	"-0.00237"	"7/90"	"7"	"90"	"682116.945617676"	"HCD"	"MS2"	"0"	"51.2"	"100.000"	"50.5530"	"15114"	"15114"	"15092"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.3"	""	"81.1"	""	"63.1"	""	"76.0"	"0.0"	"82.3"	"78.8"	""	"818"	"36"	"36.000"	"29.000"	"0.0109830587827433"	"23"	"0.0001889"	"0.0005709"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYQTIEIPPK"	"[R].yYQTIEIPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"855.49554"	"1709.98381"	"1709.98783"	"-2.35"	"-0.00201"	"8/90"	"8"	"90"	"509203.587646484"	"HCD"	"MS2"	"100"	"37.7"	"100.000"	"50.4282"	"15013"	"15013"	"14984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.7"	""	"52.4"	""	"48.4"	""	"62.5"	""	"64.3"	"59.2"	""	"804"	"29"	"36.000"	"29.000"	"0.0547300762351312"	"21"	"0.0001889"	"0.0005126"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYQTIEIPPK"	"[R].yYQTIEIPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"570.66669"	"1709.98551"	"1709.98783"	"-1.36"	"-0.00077"	"8/90"	"8"	"90"	"3791106.06390381"	"HCD"	"MS2"	"0"	"127.9"	"100.000"	"50.4820"	"15085"	"15085"	"15064"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.3"	""	"179.4"	""	"169.7"	""	"228.1"	"2.4"	"219.1"	"206.5"	""	"784"	"32"	"35.000"	"28.000"	"0.023242672723536"	"24"	"0.0001889"	"0.0004086"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYQTIEIPPK"	"[R].yYQTIEIPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"855.49689"	"1709.98650"	"1709.98783"	"-0.78"	"-0.00067"	"7/90"	"7"	"90"	"603898.071533203"	"HCD"	"MS2"	"0"	"48.2"	"100.000"	"50.9177"	"15263"	"15263"	"15238"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.7"	""	"74.2"	""	"62.5"	""	"70.9"	""	"82.7"	"81.1"	""	"767"	"31"	"35.000"	"28.000"	"0.0294283131170258"	"21"	"0.0001889"	"0.0005648"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYQTIEIPPK"	"[R].yYQTIEIPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"855.49689"	"1709.98650"	"1709.98783"	"-0.78"	"-0.00067"	"7/90"	"7"	"90"	"549516.623657227"	"HCD"	"MS2"	"33.7358"	"44.5"	"100.000"	"50.7634"	"15150"	"15150"	"15122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.4"	""	"68.0"	""	"58.5"	""	"69.4"	""	"65.3"	"83.2"	""	"767"	"22"	"35.000"	"28.000"	"0.241972141608154"	"17"	"0.0001889"	"0.001004"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYQTIEIPPK"	"[R].yYQTIEIPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"570.66718"	"1709.98697"	"1709.98783"	"-0.50"	"-0.00029"	"9/90"	"9"	"90"	"4461247.37774658"	"HCD"	"MS2"	"48.81303"	"129.0"	"100.000"	"50.6370"	"15098"	"15098"	"15074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"225.7"	""	"202.6"	""	"151.9"	""	"202.7"	""	"222.4"	"215.5"	""	"762"	"32"	"35.000"	"28.000"	"0.0244864020297784"	"20"	"0.0001889"	"0.0004726"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYQTIEIPPK"	"[R].yYQTIEIPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"570.66730"	"1709.98734"	"1709.98783"	"-0.29"	"-0.00016"	"9/90"	"9"	"90"	"4045883.90081787"	"HCD"	"MS2"	"16.91921"	"160.8"	"100.000"	"50.3021"	"14962"	"14962"	"14940"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"238.7"	""	"239.0"	""	"205.5"	""	"296.0"	"1.8"	"276.6"	"264.3"	""	"762"	"22"	"35.000"	"28.000"	"0.247699412020718"	"19"	"0.0001889"	"0.0004631"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYQTIEIPPK"	"[R].yYQTIEIPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"570.66736"	"1709.98752"	"1709.98783"	"-0.18"	"-0.00010"	"9/90"	"9"	"90"	"4877302.25738525"	"HCD"	"MS2"	"30.16757"	"146.4"	"100.000"	"50.7938"	"15212"	"15212"	"15190"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.0"	""	"211.3"	""	"184.3"	""	"241.4"	""	"253.8"	"242.8"	""	"762"	"25"	"35.000"	"28.000"	"0.116124799104826"	"18"	"0.0001889"	"0.0006045"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYQTIEIPPK"	"[R].yYQTIEIPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"570.66791"	"1709.98917"	"1709.98783"	"0.78"	"0.00045"	"7/90"	"7"	"90"	"3459237.3236084"	"HCD"	"MS2"	"7.546685"	"108.9"	"100.000"	"51.1177"	"15345"	"15345"	"15318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.5"	""	"146.7"	""	"145.2"	""	"177.3"	""	"187.5"	"194.2"	""	"743"	"38"	"35.000"	"28.000"	"0.00536980874832112"	"24"	"0"	"0.0001691"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPmITVDGk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"570.66827"	"1709.99027"	"1709.99120"	"-0.55"	"-0.00031"	"9/84"	"9"	"84"	"1728491.44238281"	"HCD"	"MS2"	"17.31422"	"70.0"	"100.000"	"56.8690"	"17679"	"17679"	"17653"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.9"	""	"98.8"	""	"98.2"	""	"128.2"	"0.9"	"122.2"	"119.6"	""	"744"	"34"	"35.000"	"28.000"	"0.015400787903294"	"17"	"0.0001889"	"0.0005912"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPmITVDGk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"570.66852"	"1709.99100"	"1709.99120"	"-0.12"	"-0.00007"	"10/84"	"10"	"84"	"4983960.15307617"	"HCD"	"MS2"	"12.98816"	"131.2"	"100.000"	"56.5094"	"17532"	"17532"	"17509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.6"	""	"181.0"	""	"204.6"	""	"261.8"	"1.7"	"209.8"	"204.2"	""	"747"	"41"	"35.000"	"28.000"	"0.00291266546280438"	"16"	"0"	"0.0001641"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPmITVDGk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"855.49927"	"1709.99126"	"1709.99120"	"0.03"	"0.00003"	"10/84"	"10"	"84"	"1462013.90753174"	"HCD"	"MS2"	"0"	"83.2"	"100.000"	"56.5232"	"17538"	"17538"	"17509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.1"	""	"112.5"	""	"129.5"	""	"157.4"	"2.0"	"125.8"	"141.4"	""	"732"	"55"	"35.000"	"28.000"	"0.000111296391939752"	"27"	"0.0001889"	"0.0005268"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPmITVDGk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.49939"	"1709.99150"	"1709.99120"	"0.18"	"0.00015"	"9/84"	"9"	"84"	"507651.57220459"	"HCD"	"MS2"	"100"	"38.5"	"100.000"	"56.9104"	"17696"	"17696"	"17669"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.6"	""	"47.1"	""	"52.1"	""	"68.0"	""	"76.0"	"70.5"	""	"732"	"6"	"35.000"	"28.000"	"9.21469755559739"	"13"	"0.001587"	"0.02107"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPmITVDGk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.50037"	"1709.99346"	"1709.99120"	"1.32"	"0.00113"	"6/84"	"6"	"84"	"561261.617248535"	"HCD"	"MS2"	"27.25253"	"40.7"	"100.000"	"56.7031"	"17557"	"17557"	"17531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.1"	""	"56.1"	""	"57.4"	""	"69.1"	""	"72.1"	"82.7"	""	"712"	"9"	"35.000"	"28.000"	"4.82447430796969"	"13"	"0.003818"	"0.09722"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPmITVDGk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"855.50067"	"1709.99407"	"1709.99120"	"1.68"	"0.00143"	"10/84"	"10"	"84"	"1332121.85192871"	"HCD"	"MS2"	"16.5968"	"83.2"	"100.000"	"56.2832"	"17386"	"17386"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.7"	""	"108.0"	""	"131.3"	""	"178.7"	"2.2"	"127.1"	"130.6"	""	"707"	"57"	"35.000"	"28.000"	"7.16785841350773E-05"	"28"	"0.0006037"	"0.005002"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIVPMITVDGK"	"[R].yIVPmITVDGk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"570.66968"	"1709.99448"	"1709.99120"	"1.92"	"0.00109"	"12/84"	"12"	"84"	"4841479.71386719"	"HCD"	"MS2"	"9.428508"	"128.4"	"100.000"	"56.3894"	"17429"	"17429"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.6"	""	"167.2"	""	"189.7"	""	"263.1"	"4.7"	"214.1"	"207.8"	""	"707"	"43"	"35.000"	"28.000"	"0.00162326497537833"	"16"	"0"	"0.0001578"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEMPSVFGK"	"[K].kEMPSVFGk.[ED]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"570.67889"	"1710.02213"	"1710.02272"	"-0.35"	"-0.00020"	"6/86"	"6"	"86"	"13783865.7275391"	"HCD"	"MS2"	"45.04544"	"463.5"	"61.240"	"40.5472"	"11042"	"11042"	"11021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"734.9"	""	"700.2"	""	"675.2"	""	"540.5"	""	"861.4"	"881.7"	""	"504"	"22"	"34.000"	"27.000"	"0.161957304763889"	"17"	"0.0001308"	"0.0002377"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEMPSVFGK"	"[K].kEMPSVFGk.[ED]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"570.67896"	"1710.02231"	"1710.02272"	"-0.24"	"-0.00014"	"6/86"	"6"	"86"	"11623593.1203003"	"HCD"	"MS2"	"45.72996"	"588.4"	"86.509"	"40.4032"	"10939"	"10939"	"10917"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"896.3"	""	"897.4"	""	"874.1"	""	"719.8"	""	"1080.9"	"1115.3"	""	"503"	"21"	"34.000"	"27.000"	"0.17928253707682"	"17"	"0"	"8.477E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSISDLFVPK"	"[K].fVSISDLFVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.51508"	"1710.02287"	"1710.02422"	"-0.78"	"-0.00067"	"9/86"	"9"	"86"	"956257.020996094"	"HCD"	"MS2"	"0"	"59.4"	"100.000"	"81.7123"	"27794"	"27794"	"27774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.4"	""	"103.0"	""	"94.6"	""	"100.8"	"1.6"	"88.9"	"100.9"	""	"503"	"59"	"34.000"	"27.000"	"3.15891535869261E-05"	"16"	"0"	"2.811E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSISDLFVPK"	"[K].fVSISDLFVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"570.67920"	"1710.02304"	"1710.02422"	"-0.68"	"-0.00039"	"7/86"	"7"	"86"	"362800.098632813"	"HCD"	"MS2"	"25.00152"	"15.4"	"100.000"	"82.3379"	"27999"	"27999"	"27968"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.2"	""	"21.9"	""	"25.1"	""	"24.9"	""	"27.5"	"33.4"	""	"502"	"35"	"33.000"	"27.000"	"0.00876342191851251"	"15"	"7.476E-05"	"0.0001887"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSISDLFVPK"	"[K].fVSISDLFVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"570.67926"	"1710.02323"	"1710.02422"	"-0.58"	"-0.00033"	"8/86"	"8"	"86"	"2078418.49853516"	"HCD"	"MS2"	"15.52825"	"50.9"	"100.000"	"81.6799"	"27730"	"27730"	"27712"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.9"	""	"81.1"	""	"81.6"	""	"90.7"	""	"76.3"	"84.7"	""	"502"	"45"	"33.000"	"27.000"	"0.000797395391733093"	"24"	"0"	"0.0001088"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSISDLFVPK"	"[K].fVSISDLFVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.67926"	"1710.02323"	"1710.02422"	"-0.58"	"-0.00033"	"8/86"	"8"	"86"	"2442586.66290283"	"HCD"	"MS2"	"3.783697"	"62.0"	"100.000"	"81.7029"	"27791"	"27791"	"27774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.1"	""	"98.8"	""	"105.4"	""	"113.6"	""	"101.9"	"107.8"	""	"502"	"38"	"33.000"	"27.000"	"0.00415598260830851"	"15"	"0"	"0.000178"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSISDLFVPK"	"[K].fVSISDLFVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.51532"	"1710.02336"	"1710.02422"	"-0.50"	"-0.00043"	"6/86"	"6"	"86"	"101207.398254395"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"82.3652"	"28061"	"28061"	"28030"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.5"	""	"9.8"	""	"9.8"	""	"14.0"	""	"12.3"	"16.4"	""	"502"	"10"	"33.000"	"27.000"	"2.49272128153654"	"13"	"0.003945"	"0.1005"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSISDLFVPK"	"[K].fVSISDLFVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.9839"	"0.0000"	"1"	"1"	"1"	"855.51532"	"1710.02336"	"1710.02422"	"-0.50"	"-0.00043"	"8/86"	"8"	"86"	"1128798.79998779"	"HCD"	"MS2"	"5.355504"	"68.6"	"100.000"	"81.7215"	"27747"	"27747"	"27728"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.5"	""	"105.7"	""	"113.7"	""	"124.1"	"1.1"	"118.4"	"111.7"	""	"502"	"62"	"33.000"	"27.000"	"1.66216342429142E-05"	"18"	"0"	"3.53E-05"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSISDLFVPK"	"[K].fVSISDLFVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.51532"	"1710.02336"	"1710.02422"	"-0.50"	"-0.00043"	"8/86"	"8"	"86"	"1288169.8729248"	"HCD"	"MS2"	"0"	"78.5"	"100.000"	"82.0288"	"27873"	"27873"	"27856"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.1"	""	"110.6"	""	"130.0"	""	"135.2"	""	"129.8"	"149.1"	""	"502"	"59"	"33.000"	"27.000"	"3.38589683530505E-05"	"16"	"0"	"2.181E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSISDLFVPK"	"[K].fVSISDLFVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"570.67950"	"1710.02396"	"1710.02422"	"-0.15"	"-0.00009"	"8/86"	"8"	"86"	"5020470.83032227"	"HCD"	"MS2"	"0.5562032"	"115.2"	"100.000"	"81.9896"	"27857"	"27857"	"27840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.0"	""	"172.0"	""	"178.1"	""	"203.5"	""	"196.6"	"220.6"	""	"504"	"41"	"34.000"	"27.000"	"0.00218978028180148"	"18"	"0"	"0.0001175"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSISDLFVPK"	"[K].fVSISDLFVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.51630"	"1710.02532"	"1710.02422"	"0.64"	"0.00055"	"8/86"	"8"	"86"	"1445926.25708008"	"HCD"	"MS2"	"0"	"82.4"	"100.000"	"82.0215"	"27920"	"27920"	"27902"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.6"	""	"126.2"	""	"138.0"	""	"123.8"	""	"138.6"	"157.0"	""	"494"	"58"	"33.000"	"26.000"	"3.71276065624236E-05"	"16"	"0"	"6.039E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSISDLFVPK"	"[K].fVSISDLFVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"570.68011"	"1710.02579"	"1710.02422"	"0.92"	"0.00053"	"8/86"	"8"	"86"	"5091382.82501221"	"HCD"	"MS2"	"3.051554"	"113.9"	"100.000"	"82.0170"	"27919"	"27919"	"27902"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.8"	""	"177.4"	""	"184.1"	""	"183.9"	""	"188.3"	"217.6"	""	"484"	"48"	"33.000"	"26.000"	"0.000420547800557349"	"22"	"0"	"0.0001824"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAGYDPTPTMR"	"[R].lFLAGYDPTPTMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.97394"	"1710.90726"	"1710.90864"	"-0.81"	"-0.00046"	"11/104"	"11"	"104"	"2922306.73120117"	"HCD"	"MS2"	"6.470669"	"52.8"	"100.000"	"63.0225"	"20187"	"20187"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.2"	""	"70.3"	""	"82.3"	""	"80.2"	"3.5"	"97.8"	"92.0"	""	"1076"	"38"	"37.000"	"30.000"	"0.00907365527659144"	"15"	"0"	"5.75E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAGYDPTPTMR"	"[R].lFLAGYDPTPTMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"855.95807"	"1710.90886"	"1710.90864"	"0.13"	"0.00011"	"15/104"	"15"	"104"	"2947729.32348633"	"HCD"	"MS2"	"38.11544"	"124.6"	"100.000"	"62.8981"	"20136"	"20136"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.9"	""	"197.8"	""	"174.9"	""	"150.2"	""	"208.6"	"225.2"	""	"1091"	"34"	"37.000"	"30.000"	"0.0194892333211877"	"17"	"0"	"5.116E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAGYDPTPTMR"	"[R].lFLAGYDPTPTMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.97455"	"1710.90909"	"1710.90864"	"0.26"	"0.00015"	"16/104"	"16"	"104"	"3366919.8059082"	"HCD"	"MS2"	"7.427186"	"55.6"	"100.000"	"62.8926"	"20081"	"20081"	"20057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.9"	""	"80.3"	""	"81.3"	""	"80.0"	""	"96.5"	"105.4"	""	"1074"	"38"	"37.000"	"30.000"	"0.00849130197088196"	"15"	"0"	"3.214E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAGYDPTPTMR"	"[R].lFLAGYDPTPTMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"855.95862"	"1710.90996"	"1710.90864"	"0.77"	"0.00066"	"8/104"	"8"	"104"	"2302030.699646"	"HCD"	"MS2"	"49.69339"	"103.9"	"100.000"	"62.7382"	"20018"	"20018"	"19993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.7"	""	"155.7"	""	"169.8"	""	"136.8"	""	"181.1"	"175.4"	""	"1071"	"24"	"37.000"	"30.000"	"0.235917129407759"	"15"	"0.0001889"	"0.000579"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQMFGDNVQK"	"[K].vSQMFGDNVQk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"855.96509"	"1710.92290"	"1710.92491"	"-1.18"	"-0.00101"	"10/106"	"10"	"106"	"941965.641967773"	"HCD"	"MS2"	"0"	"92.6"	"100.000"	"43.1292"	"12097"	"12097"	"12079"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.5"	""	"112.6"	""	"130.6"	""	"118.2"	"1.0"	"145.8"	"197.5"	""	"1074"	"55"	"37.000"	"30.000"	"0.000157751786310334"	"24"	"0"	"1.605E-05"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGVATYAAAVLFR"	"[R].nEGVATYAAAVLFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.97217"	"1710.93706"	"1710.93764"	"-0.34"	"-0.00029"	"11/138"	"11"	"138"	"638860.674682617"	"HCD"	"MS2"	"0"	"38.8"	"100.000"	"67.6604"	"22021"	"22021"	"21999"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.4"	""	"60.8"	""	"53.6"	""	"57.5"	"1.6"	"72.1"	"71.1"	""	"1104"	"69"	"37.000"	"30.000"	"7.54986311728908E-06"	"17"	"0"	"2.099E-06"	"1.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGVATYAAAVLFR"	"[R].nEGVATYAAAVLFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.97241"	"1710.93755"	"1710.93764"	"-0.05"	"-0.00004"	"12/138"	"12"	"138"	"897034.473083496"	"HCD"	"MS2"	"100"	"50.7"	"100.000"	"67.6401"	"22063"	"22063"	"22042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.8"	""	"77.1"	""	"65.7"	""	"76.8"	""	"101.5"	"112.7"	""	"1095"	"51"	"37.000"	"30.000"	"0.000424995296354208"	"16"	"0"	"1.427E-06"	"1.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGVATYAAAVLFR"	"[R].nEGVATYAAAVLFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"855.97260"	"1710.93791"	"1710.93764"	"0.16"	"0.00014"	"10/138"	"10"	"138"	"415979.30645752"	"HCD"	"MS2"	"18.43812"	"35.2"	"100.000"	"67.9660"	"22145"	"22145"	"22122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.8"	""	"46.4"	""	"52.4"	""	"60.7"	"0.1"	"65.3"	"70.3"	""	"1091"	"41"	"37.000"	"30.000"	"0.00393364129894271"	"18"	"0"	"0.0001307"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFDKDAMVAR"	"[R].lSFDkDAMVAR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.99164"	"1710.96036"	"1710.96130"	"-0.55"	"-0.00031"	"8/100"	"8"	"100"	"16106147.7869873"	"HCD"	"MS2"	"30.88156"	"863.1"	"100.000"	"42.3478"	"11733"	"11733"	"11708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1587.4"	""	"1512.6"	""	"1463.4"	""	"999.0"	"9.8"	"1254.5"	"1317.3"	""	"992"	"10"	"36.000"	"29.000"	"4.92585560016783"	"13"	"0.0001308"	"0.0002686"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFDKDAMVAR"	"[R].lSFDkDAMVAR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.99176"	"1710.96073"	"1710.96130"	"-0.33"	"-0.00019"	"7/100"	"7"	"100"	"18570634.4243164"	"HCD"	"MS2"	"13.07752"	"886.0"	"88.206"	"42.6434"	"11898"	"11898"	"11875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1546.0"	""	"1516.8"	""	"1531.4"	""	"1060.0"	""	"1344.6"	"1371.8"	""	"967"	"2"	"36.000"	"29.000"	"30.0882187879289"	"13"	"0.000523"	"0.003098"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQIFNIEMK"	"[K].tLQIFNIEmk.[S]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"855.99658"	"1710.98589"	"1710.98645"	"-0.33"	"-0.00028"	"9/100"	"9"	"100"	"1331599.46313477"	"HCD"	"MS2"	"0"	"102.0"	"100.000"	"60.9590"	"19345"	"19345"	"19315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.7"	""	"94.1"	""	"98.0"	""	"285.7"	""	"217.3"	"184.3"	""	"815"	"29"	"36.000"	"29.000"	"0.0486550152569191"	"17"	"0.0006037"	"0.005873"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQIFNIEMK"	"[K].tLQIFNIEmk.[S]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7414"	"0.0000"	"1"	"1"	"1"	"855.99841"	"1710.98955"	"1710.98645"	"1.81"	"0.00155"	"9/100"	"9"	"100"	"1327236.32757568"	"HCD"	"MS2"	"0"	"105.1"	"100.000"	"60.7908"	"19223"	"19223"	"19193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.5"	""	"109.6"	""	"109.1"	""	"295.9"	"3.8"	"200.8"	"183.9"	""	"798"	"58"	"36.000"	"29.000"	"6.87025561419417E-05"	""	"0"	"0.0001165"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQIFNIEMK"	"[K].tLQIFNIEmk.[S]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"855.99854"	"1710.98979"	"1710.98645"	"1.95"	"0.00167"	"10/100"	"10"	"100"	"276716.045715332"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"61.0972"	"19348"	"19348"	"19321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.7"	""	"35.9"	""	"40.0"	""	"57.4"	""	"53.0"	"58.9"	""	"798"	"14"	"36.000"	"29.000"	"1.72573018582969"	"19"	"0.002953"	"0.0525"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8987"	"0.0000"	"1"	"1"	"1"	"856.02216"	"1711.03703"	"1711.04059"	"-2.08"	"-0.00178"	"20/102"	"20"	"102"	"2717048.96203613"	"HCD"	"MS2"	"0"	"178.6"	"100.000"	"65.4582"	"21182"	"21182"	"21155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.5"	""	"172.3"	""	"185.8"	""	"428.2"	""	"373.5"	"381.9"	""	"450"	"79"	"33.000"	"26.000"	"2.78088172525015E-07"	"26"	"0"	"3.879E-06"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"856.02234"	"1711.03740"	"1711.04059"	"-1.87"	"-0.00160"	"15/102"	"15"	"102"	"353230.286499023"	"HCD"	"MS2"	"24.11926"	"31.7"	"100.000"	"73.2376"	"24297"	"24297"	"24273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.5"	""	"22.5"	""	"38.1"	""	"66.4"	"0.8"	"80.2"	"71.4"	""	"450"	"58"	"33.000"	"26.000"	"3.47682248896143E-05"	"21"	"0"	"1.595E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"856.02246"	"1711.03765"	"1711.04059"	"-1.72"	"-0.00147"	"19/102"	"19"	"102"	"374542.705322266"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"73.1040"	"24294"	"24294"	"24271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.6"	""	"26.5"	""	"36.4"	""	"72.2"	"0.4"	"97.2"	"73.2"	""	"450"	"65"	"33.000"	"26.000"	"7.46762529493371E-06"	"23"	"0"	"4.215E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"856.02252"	"1711.03777"	"1711.04059"	"-1.65"	"-0.00141"	"20/102"	"20"	"102"	"3451244.39855957"	"HCD"	"MS2"	"0"	"231.7"	"100.000"	"65.7465"	"21300"	"21300"	"21283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.3"	""	"223.4"	""	"249.1"	""	"510.1"	"2.6"	"501.3"	"524.3"	""	"450"	"76"	"33.000"	"26.000"	"5.38496045191212E-07"	"25"	"0"	"5.951E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"571.01752"	"1711.03800"	"1711.04059"	"-1.52"	"-0.00087"	"11/102"	"11"	"102"	"4817674.91534424"	"HCD"	"MS2"	"12.92157"	"113.6"	"89.856"	"64.3864"	"20744"	"20744"	"20723"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.6"	"3.6"	"152.1"	""	"161.0"	""	"184.7"	""	"215.2"	"220.8"	""	"462"	"25"	"33.000"	"26.000"	"0.071550385811903"	"15"	"0.0001308"	"0.0002732"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9467"	"0.0000"	"1"	"1"	"1"	"856.02271"	"1711.03813"	"1711.04059"	"-1.44"	"-0.00123"	"11/102"	"11"	"102"	"1153797.15509033"	"HCD"	"MS2"	"0"	"85.0"	"100.000"	"72.4750"	"24037"	"24037"	"24015"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.2"	""	"73.7"	""	"85.9"	""	"194.7"	"1.5"	"191.0"	"209.9"	""	"461"	"75"	"33.000"	"26.000"	"6.69377221854054E-07"	"21"	"0"	"1.709E-06"	"1.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"856.02289"	"1711.03850"	"1711.04059"	"-1.22"	"-0.00105"	"11/102"	"11"	"102"	"3664863.68432617"	"HCD"	"MS2"	"0"	"241.2"	"100.000"	"71.6345"	"23642"	"23642"	"23619"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.4"	""	"195.5"	""	"233.8"	""	"640.9"	""	"528.9"	"579.3"	""	"444"	"90"	"33.000"	"26.000"	"2.0861857494535E-08"	""	"0"	"1.939E-06"	"1.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"571.01776"	"1711.03873"	"1711.04059"	"-1.09"	"-0.00062"	"12/102"	"12"	"102"	"1791722.27032471"	"HCD"	"MS2"	"27.27778"	"48.3"	"100.000"	"77.2665"	"25981"	"25981"	"25957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.1"	""	"48.5"	""	"64.4"	""	"117.3"	""	"99.2"	"93.3"	""	"444"	"34"	"33.000"	"26.000"	"0.00975782386271971"	"20"	"0"	"0.0001175"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9452"	"0.0000"	"1"	"1"	"1"	"571.01782"	"1711.03891"	"1711.04059"	"-0.98"	"-0.00056"	"9/102"	"9"	"102"	"6489456.23492432"	"HCD"	"MS2"	"13.71903"	"128.7"	"77.489"	"65.7923"	"21318"	"21318"	"21299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.3"	"4.0"	"133.3"	""	"140.4"	""	"268.4"	""	"278.4"	"270.7"	""	"443"	"73"	"33.000"	"26.000"	"1.03842164145176E-06"	"21"	"0"	"1.776E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.01782"	"1711.03891"	"1711.04059"	"-0.98"	"-0.00056"	"9/102"	"9"	"102"	"2958509.38354492"	"HCD"	"MS2"	"50.17585"	"75.7"	"100.000"	"73.4846"	"24449"	"24449"	"24431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.0"	""	"105.1"	""	"85.1"	""	"111.8"	""	"180.8"	"134.0"	""	"443"	"9"	"33.000"	"26.000"	"3.02255164754447"	"13"	"0.0009727"	"0.01064"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"571.01782"	"1711.03891"	"1711.04059"	"-0.98"	"-0.00056"	"12/102"	"12"	"102"	"4021008.5324707"	"HCD"	"MS2"	"18.96512"	"88.0"	"100.000"	"74.0403"	"24676"	"24676"	"24655"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.8"	""	"108.6"	""	"103.4"	""	"187.0"	""	"165.1"	"190.1"	""	"443"	"38"	"33.000"	"26.000"	"0.00392079134267309"	"17"	"0"	"0.0001627"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"571.01782"	"1711.03891"	"1711.04059"	"-0.98"	"-0.00056"	"9/102"	"9"	"102"	"11187096.4124756"	"HCD"	"MS2"	"11.68951"	"254.6"	"100.000"	"65.4860"	"21193"	"21193"	"21171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.3"	""	"241.5"	""	"271.5"	""	"577.0"	"7.5"	"552.9"	"533.3"	""	"443"	"66"	"33.000"	"26.000"	"5.20443669817899E-06"	"19"	"0"	"1.5E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"856.02313"	"1711.03899"	"1711.04059"	"-0.94"	"-0.00080"	"13/102"	"13"	"102"	"466163.723693848"	"HCD"	"MS2"	"41.62608"	"43.7"	"100.000"	"64.4878"	"20786"	"20786"	"20755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.5"	""	"47.1"	""	"52.2"	""	"80.5"	""	"97.5"	"94.0"	""	"443"	"31"	"33.000"	"26.000"	"0.0168800500720629"	"17"	"0.0001889"	"0.0006956"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9140"	"0.0000"	"1"	"1"	"1"	"856.02313"	"1711.03899"	"1711.04059"	"-0.94"	"-0.00080"	"11/102"	"11"	"102"	"3262135.92663574"	"HCD"	"MS2"	"1.82699"	"231.6"	"100.000"	"65.8190"	"21276"	"21276"	"21257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"206.2"	""	"210.2"	""	"233.3"	""	"528.4"	"5.8"	"507.4"	"513.1"	""	"443"	"93"	"33.000"	"26.000"	"1.08986757153441E-08"	""	"0"	"4.093E-06"	"1.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"571.01788"	"1711.03910"	"1711.04059"	"-0.87"	"-0.00050"	"12/102"	"12"	"102"	"1829750.14746094"	"HCD"	"MS2"	"21.82711"	"48.5"	"100.000"	"77.3208"	"25952"	"25952"	"25929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.0"	""	"58.3"	""	"62.5"	""	"119.7"	"0.3"	"93.9"	"90.9"	""	"443"	"43"	"33.000"	"26.000"	"0.00106505915681615"	"20"	"0"	"0.0001339"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8871"	"0.0000"	"1"	"1"	"1"	"571.01788"	"1711.03910"	"1711.04059"	"-0.87"	"-0.00050"	"12/102"	"12"	"102"	"5153655.61126709"	"HCD"	"MS2"	"30.17631"	"123.0"	"100.000"	"63.4113"	"20346"	"20346"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.8"	""	"128.5"	""	"142.4"	""	"246.2"	""	"266.6"	"266.7"	""	"443"	"62"	"33.000"	"26.000"	"1.54302772875535E-05"	"23"	"0"	"1.81E-05"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8831"	"0.0000"	"1"	"1"	"1"	"856.02319"	"1711.03911"	"1711.04059"	"-0.87"	"-0.00074"	"10/102"	"10"	"102"	"462444.482177734"	"HCD"	"MS2"	"0"	"38.5"	"100.000"	"72.7882"	"24165"	"24165"	"24143"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.2"	""	"36.2"	""	"35.5"	""	"87.2"	"1.2"	"83.5"	"98.5"	""	"443"	"77"	"33.000"	"26.000"	"4.09612999103645E-07"	"26"	"0"	"1.668E-06"	"1.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"856.02319"	"1711.03911"	"1711.04059"	"-0.87"	"-0.00074"	"11/102"	"11"	"102"	"1425833.36694336"	"HCD"	"MS2"	"28.02712"	"110.9"	"100.000"	"63.3622"	"20273"	"20273"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.1"	""	"121.2"	""	"132.9"	""	"221.0"	""	"248.5"	"230.2"	""	"443"	"54"	"33.000"	"26.000"	"9.14900216908206E-05"	"23"	"0"	"4.891E-06"	"1.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9054"	"0.0000"	"1"	"1"	"1"	"856.02319"	"1711.03911"	"1711.04059"	"-0.87"	"-0.00074"	"20/102"	"20"	"102"	"2163618.14874268"	"HCD"	"MS2"	"0"	"153.1"	"100.000"	"65.5124"	"21151"	"21151"	"21129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.1"	""	"154.5"	""	"164.8"	""	"365.1"	"0.2"	"309.5"	"311.1"	""	"443"	"74"	"33.000"	"26.000"	"8.65712584180171E-07"	"24"	"0"	"1.69E-06"	"1.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"856.02325"	"1711.03923"	"1711.04059"	"-0.80"	"-0.00068"	"19/102"	"19"	"102"	"5461566.80908203"	"HCD"	"MS2"	"0"	"329.3"	"100.000"	"71.5729"	"23669"	"23669"	"23642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.0"	""	"274.5"	""	"312.9"	""	"849.4"	"3.5"	"737.3"	"792.7"	""	"443"	"80"	"33.000"	"26.000"	"2.04820645527316E-07"	"26"	"0"	"5.282E-06"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"571.01794"	"1711.03928"	"1711.04059"	"-0.77"	"-0.00044"	"11/102"	"11"	"102"	"2071120.91711426"	"HCD"	"MS2"	"39.39439"	"54.5"	"100.000"	"73.1847"	"24327"	"24327"	"24303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.4"	""	"48.4"	""	"59.2"	""	"116.8"	"0.4"	"133.9"	"119.2"	""	"441"	"50"	"33.000"	"26.000"	"0.000205309286540656"	"22"	"0"	"6.691E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9054"	"0.0000"	"1"	"1"	"1"	"571.01794"	"1711.03928"	"1711.04059"	"-0.77"	"-0.00044"	"9/102"	"9"	"102"	"9472014.60717773"	"HCD"	"MS2"	"17.68647"	"231.5"	"100.000"	"64.0476"	"20606"	"20606"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.0"	"8.7"	"226.0"	""	"239.3"	""	"525.7"	"0.1"	"507.5"	"474.1"	""	"441"	"74"	"33.000"	"26.000"	"8.59822080621778E-07"	"24"	"0"	"1.083E-05"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.02332"	"1711.03935"	"1711.04059"	"-0.72"	"-0.00062"	"15/102"	"15"	"102"	"563543.510131836"	"HCD"	"MS2"	"45.12336"	"41.4"	"100.000"	"74.1857"	"24684"	"24684"	"24657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.2"	""	"58.7"	""	"56.2"	""	"80.6"	""	"70.1"	"90.6"	""	"441"	"44"	"33.000"	"26.000"	"0.000892089841192861"	"15"	"0"	"0.0001043"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"571.01801"	"1711.03946"	"1711.04059"	"-0.66"	"-0.00038"	"9/102"	"9"	"102"	"6875579.6260376"	"HCD"	"MS2"	"8.226405"	"145.8"	"86.370"	"64.2939"	"20653"	"20653"	"20633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.2"	"6.5"	"160.7"	""	"171.4"	""	"304.8"	"2.8"	"288.3"	"299.3"	""	"441"	"77"	"33.000"	"26.000"	"4.58573119506365E-07"	"25"	"0"	"6.108E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"856.02338"	"1711.03948"	"1711.04059"	"-0.65"	"-0.00056"	"11/102"	"11"	"102"	"224629.58807373"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"73.6667"	"24524"	"24524"	"24495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.8"	""	"20.1"	""	"21.7"	""	"40.7"	""	"59.6"	"44.4"	""	"441"	"41"	"33.000"	"26.000"	"0.0018256124709857"	"19"	"0"	"0.0001685"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8939"	"0.0000"	"1"	"1"	"1"	"856.02344"	"1711.03960"	"1711.04059"	"-0.58"	"-0.00050"	"16/102"	"16"	"102"	"267989.06854248"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"77.5893"	"26113"	"26113"	"26085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.5"	""	"24.2"	""	"24.7"	""	"44.7"	"0.8"	"46.4"	"43.5"	""	"441"	"66"	"33.000"	"26.000"	"5.85340526415605E-06"	"23"	"0"	"3.384E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"856.02344"	"1711.03960"	"1711.04059"	"-0.58"	"-0.00050"	"19/102"	"19"	"102"	"63978443.7348633"	"HCD"	"MS2"	"0"	"652.5"	"17.122"	"71.8394"	"23778"	"23778"	"23769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"319.8"	""	"539.4"	""	"665.2"	""	"1534.5"	"18.3"	"1486.5"	"1658.2"	""	"441"	"80"	"33.000"	"26.000"	"2.01098390077978E-07"	"24"	"0"	"2.486E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"571.01807"	"1711.03965"	"1711.04059"	"-0.55"	"-0.00032"	"11/102"	"11"	"102"	"2419043.18621826"	"HCD"	"MS2"	"18.60892"	"54.7"	"100.000"	"72.8319"	"24183"	"24183"	"24159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.6"	""	"52.7"	""	"59.4"	""	"121.0"	"0.5"	"114.0"	"136.3"	""	"441"	"53"	"33.000"	"26.000"	"0.000116522178016427"	"23"	"0"	"4.558E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"571.01807"	"1711.03965"	"1711.04059"	"-0.55"	"-0.00032"	"12/102"	"12"	"102"	"4356444.18499756"	"HCD"	"MS2"	"27.36568"	"107.0"	"100.000"	"63.3275"	"20259"	"20259"	"20233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.8"	""	"119.8"	""	"129.0"	""	"225.5"	""	"216.6"	"217.3"	""	"441"	"61"	"33.000"	"26.000"	"1.59004199159829E-05"	"19"	"0"	"2.243E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"856.02350"	"1711.03972"	"1711.04059"	"-0.51"	"-0.00044"	"19/102"	"19"	"102"	"73236446.2373047"	"HCD"	"MS2"	"0"	"507.0"	"11.504"	"71.9261"	"23762"	"23762"	"23745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.9"	""	"418.5"	""	"513.9"	""	"1214.8"	"9.7"	"1139.7"	"1290.2"	""	"441"	"80"	"33.000"	"26.000"	"2.02959130571574E-07"	"24"	"0"	"2.705E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.01813"	"1711.03983"	"1711.04059"	"-0.45"	"-0.00025"	"12/102"	"12"	"102"	"1231414.83953857"	"HCD"	"MS2"	"47.21423"	"41.5"	"100.000"	"74.3607"	"24807"	"24807"	"24783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.2"	""	"60.2"	""	"54.8"	""	"74.2"	""	"75.4"	"83.5"	""	"438"	"30"	"33.000"	"26.000"	"0.0233047320991125"	"14"	"0.0001308"	"0.0002664"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"571.01813"	"1711.03983"	"1711.04059"	"-0.45"	"-0.00025"	"9/102"	"9"	"102"	"9426375.37255859"	"HCD"	"MS2"	"10.61127"	"180.6"	"81.860"	"65.8167"	"21275"	"21275"	"21257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.4"	""	"168.1"	""	"201.3"	""	"379.6"	""	"405.2"	"401.1"	""	"438"	"68"	"33.000"	"26.000"	"3.23924737008838E-06"	"25"	"0"	"3.869E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8852"	"0.0000"	"1"	"1"	"1"	"571.01813"	"1711.03983"	"1711.04059"	"-0.45"	"-0.00025"	"9/102"	"9"	"102"	"26133211.5505981"	"HCD"	"MS2"	"15.82135"	"505.4"	"87.955"	"71.6620"	"23653"	"23653"	"23635"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.0"	"12.1"	"399.4"	""	"494.3"	""	"1295.4"	"15.2"	"1130.9"	"1224.5"	""	"438"	"61"	"33.000"	"26.000"	"1.903023340137E-05"	"23"	"0"	"5.472E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9242"	"0.0000"	"1"	"1"	"1"	"856.02362"	"1711.03996"	"1711.04059"	"-0.37"	"-0.00031"	"16/102"	"16"	"102"	"434563.240783691"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"72.9261"	"24170"	"24170"	"24145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.4"	""	"30.3"	""	"40.0"	""	"83.5"	"0.4"	"84.8"	"81.7"	""	"438"	"66"	"33.000"	"26.000"	"5.1102731563954E-06"	"22"	"0"	"2.282E-06"	"1.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"856.02362"	"1711.03996"	"1711.04059"	"-0.37"	"-0.00031"	"11/102"	"11"	"102"	"613013.930603027"	"HCD"	"MS2"	"0"	"49.3"	"100.000"	"77.2642"	"25980"	"25980"	"25957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.6"	""	"58.3"	""	"56.2"	""	"112.6"	"0.2"	"101.1"	"101.3"	""	"438"	"74"	"33.000"	"26.000"	"8.2688309812666E-07"	"23"	"0"	"2.095E-06"	"1.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9605"	"0.0000"	"1"	"1"	"1"	"856.02362"	"1711.03996"	"1711.04059"	"-0.37"	"-0.00031"	"11/102"	"11"	"102"	"990791.650512695"	"HCD"	"MS2"	"0"	"74.0"	"100.000"	"72.5689"	"24024"	"24024"	"24001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.5"	""	"71.1"	""	"88.1"	""	"168.5"	""	"164.3"	"179.3"	""	"438"	"76"	"33.000"	"26.000"	"5.90804935705438E-07"	"21"	"0"	"1.154E-06"	"1.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"856.02362"	"1711.03996"	"1711.04059"	"-0.37"	"-0.00031"	"11/102"	"11"	"102"	"3221725.97381592"	"HCD"	"MS2"	"0"	"215.3"	"100.000"	"64.0709"	"20615"	"20615"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.0"	""	"205.5"	""	"226.1"	""	"495.4"	"1.5"	"459.6"	"448.1"	""	"438"	"90"	"33.000"	"26.000"	"2.01114838629904E-08"	"26"	"0"	"3.872E-06"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"856.02362"	"1711.03996"	"1711.04059"	"-0.37"	"-0.00031"	"11/102"	"11"	"102"	"8405041.21276855"	"HCD"	"MS2"	"0"	"377.8"	"73.762"	"72.1477"	"23904"	"23904"	"23887"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.1"	""	"318.5"	""	"389.7"	""	"856.2"	"9.7"	"868.6"	"979.3"	""	"438"	"76"	"33.000"	"26.000"	"5.46316245200506E-07"	"23"	"0"	"1.048E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9649"	"0.0000"	"1"	"1"	"1"	"571.01825"	"1711.04020"	"1711.04059"	"-0.23"	"-0.00013"	"12/102"	"12"	"102"	"5771929.8338623"	"HCD"	"MS2"	"21.21944"	"140.7"	"100.000"	"65.5080"	"21149"	"21149"	"21129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.8"	""	"145.6"	""	"150.7"	""	"332.3"	""	"293.4"	"278.1"	""	"440"	"57"	"33.000"	"26.000"	"4.33933001945268E-05"	"19"	"0"	"1.414E-05"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8987"	"0.0000"	"1"	"1"	"1"	"856.02380"	"1711.04033"	"1711.04059"	"-0.15"	"-0.00013"	"19/102"	"19"	"102"	"460060.100280762"	"HCD"	"MS2"	"10.08575"	"38.1"	"100.000"	"77.2793"	"25935"	"25935"	"25913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.3"	""	"44.9"	""	"45.0"	""	"90.5"	"0.6"	"82.2"	"73.3"	""	"440"	"79"	"33.000"	"26.000"	"2.52593796729314E-07"	"26"	"0"	"1.429E-06"	"1.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"571.01831"	"1711.04038"	"1711.04059"	"-0.13"	"-0.00007"	"14/102"	"14"	"102"	"4045405.96838379"	"HCD"	"MS2"	"9.060531"	"99.8"	"100.000"	"72.6036"	"24038"	"24038"	"24017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.4"	""	"89.9"	""	"98.5"	""	"226.4"	""	"229.7"	"252.3"	""	"440"	"52"	"33.000"	"26.000"	"0.000130744274895426"	"22"	"0"	"3.761E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"571.01831"	"1711.04038"	"1711.04059"	"-0.13"	"-0.00007"	"9/102"	"9"	"102"	"4766358.00476074"	"HCD"	"MS2"	"28.3831"	"110.2"	"100.000"	"73.9687"	"24595"	"24595"	"24577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.1"	""	"154.4"	""	"129.1"	""	"227.4"	"0.0"	"207.1"	"208.5"	""	"440"	"39"	"33.000"	"26.000"	"0.00293374715075931"	"16"	"0"	"3.513E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9865"	"0.0000"	"1"	"1"	"1"	"856.02386"	"1711.04045"	"1711.04059"	"-0.08"	"-0.00007"	"17/102"	"17"	"102"	"316032.391967773"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"77.5885"	"26061"	"26061"	"26041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.4"	""	"30.3"	""	"36.5"	""	"53.7"	"0.0"	"57.9"	"54.6"	""	"440"	"74"	"33.000"	"26.000"	"7.91448537342632E-07"	"18"	"0"	"7.598E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"856.02386"	"1711.04045"	"1711.04059"	"-0.08"	"-0.00007"	"11/102"	"11"	"102"	"1103280.15814209"	"HCD"	"MS2"	"18.86056"	"87.7"	"100.000"	"63.5382"	"20398"	"20398"	"20371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.6"	""	"98.9"	""	"100.8"	""	"172.1"	""	"200.2"	"184.1"	""	"440"	"53"	"33.000"	"26.000"	"0.000121177693209189"	"21"	"0"	"1.027E-05"	"1.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"571.01837"	"1711.04056"	"1711.04059"	"-0.02"	"-0.00001"	"12/102"	"12"	"102"	"4329130.98748779"	"HCD"	"MS2"	"8.18094"	"96.2"	"100.000"	"72.5071"	"24050"	"24050"	"24031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.2"	"2.6"	"79.2"	""	"107.5"	""	"218.0"	""	"203.2"	"246.1"	""	"431"	"51"	"33.000"	"26.000"	"0.000182998392370325"	"23"	"0"	"4.227E-05"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8961"	"0.0000"	"1"	"1"	"1"	"856.02393"	"1711.04057"	"1711.04059"	"-0.01"	"-0.00001"	"18/102"	"18"	"102"	"854080.226745605"	"HCD"	"MS2"	"0"	"66.2"	"100.000"	"73.9620"	"24644"	"24644"	"24623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.6"	""	"58.5"	""	"79.0"	""	"155.0"	"1.8"	"140.3"	"146.6"	""	"425"	"77"	"33.000"	"26.000"	"3.92065776575638E-07"	"25"	"0"	"9.81E-07"	"1.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.02393"	"1711.04057"	"1711.04059"	"-0.01"	"-0.00001"	"11/102"	"11"	"102"	"1915851.94610596"	"HCD"	"MS2"	"33.31748"	"252.2"	"100.000"	"72.2529"	"23895"	"23895"	"23873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.7"	""	"228.1"	""	"257.4"	""	"565.2"	"1.4"	"565.9"	"639.7"	""	"425"	"6"	"33.000"	"26.000"	"5.98906372893697"	"13"	"0.0001308"	"0.0002504"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"856.02393"	"1711.04057"	"1711.04059"	"-0.01"	"-0.00001"	"11/102"	"11"	"102"	"6266575.61071777"	"HCD"	"MS2"	"0"	"252.2"	"100.000"	"72.2391"	"23890"	"23890"	"23873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.7"	""	"228.1"	""	"257.4"	""	"565.2"	"1.4"	"565.9"	"639.7"	""	"425"	"78"	"33.000"	"26.000"	"3.59218697974194E-07"	"24"	"0"	"8.852E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.01843"	"1711.04074"	"1711.04059"	"0.09"	"0.00005"	"11/102"	"11"	"102"	"2113063.453125"	"HCD"	"MS2"	"31.88425"	"60.4"	"100.000"	"73.5098"	"24408"	"24408"	"24385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.7"	""	"75.9"	""	"63.6"	""	"80.8"	"1.2"	"168.6"	"113.8"	""	"424"	"34"	"33.000"	"26.000"	"0.00867632598627623"	"15"	"0.0001889"	"0.0004544"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"571.01843"	"1711.04074"	"1711.04059"	"0.09"	"0.00005"	"9/102"	"9"	"102"	"7504186.99676514"	"HCD"	"MS2"	"36.18091"	"181.9"	"100.000"	"64.0030"	"20535"	"20535"	"20505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.7"	"6.2"	"180.3"	""	"205.7"	""	"405.1"	""	"369.1"	"383.5"	""	"424"	"64"	"33.000"	"26.000"	"7.59164446657589E-06"	"19"	"0"	"1.211E-05"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"571.01843"	"1711.04074"	"1711.04059"	"0.09"	"0.00005"	"9/102"	"9"	"102"	"30194419.6891479"	"HCD"	"MS2"	"11.23604"	"644.3"	"100.000"	"71.5935"	"23677"	"23677"	"23658"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.4"	"13.8"	"533.8"	""	"649.8"	""	"1619.4"	"2.3"	"1460.7"	"1564.4"	""	"424"	"58"	"33.000"	"26.000"	"3.76995234928252E-05"	"19"	"0"	"2.587E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"856.02405"	"1711.04082"	"1711.04059"	"0.13"	"0.00011"	"19/102"	"19"	"102"	"1481444.7958374"	"HCD"	"MS2"	"19.57996"	"107.0"	"100.000"	"64.3349"	"20670"	"20670"	"20649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.0"	""	"104.1"	""	"120.9"	""	"207.1"	"0.7"	"226.6"	"245.0"	""	"423"	"75"	"33.000"	"26.000"	"6.09972662911277E-07"	"20"	"0"	"2.468E-06"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9492"	"0.0000"	"1"	"1"	"1"	"571.01849"	"1711.04093"	"1711.04059"	"0.20"	"0.00011"	"9/102"	"9"	"102"	"30430426.8308105"	"HCD"	"MS2"	"5.918598"	"151.1"	"23.924"	"72.1869"	"23920"	"23920"	"23903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.6"	"2.3"	"125.8"	""	"163.8"	""	"345.6"	"1.8"	"341.9"	"390.8"	""	"423"	"59"	"33.000"	"26.000"	"2.56631741873343E-05"	"19"	"0"	"7.948E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"571.01849"	"1711.04093"	"1711.04059"	"0.20"	"0.00011"	"11/102"	"11"	"102"	"21332010.1737061"	"HCD"	"MS2"	"5.464961"	"189.2"	"39.012"	"72.2783"	"23906"	"23906"	"23889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.0"	"5.4"	"151.6"	""	"195.9"	""	"444.5"	""	"441.8"	"461.6"	""	"423"	"46"	"33.000"	"26.000"	"0.000553745706238315"	"18"	"0"	"7.463E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"856.02417"	"1711.04106"	"1711.04059"	"0.27"	"0.00023"	"20/102"	"20"	"102"	"2205803.60681152"	"HCD"	"MS2"	"0"	"171.1"	"100.000"	"64.0145"	"20539"	"20539"	"20521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.7"	""	"170.0"	""	"193.1"	""	"383.8"	"0.3"	"352.9"	"363.2"	""	"421"	"78"	"33.000"	"26.000"	"3.02867100722855E-07"	"25"	"0"	"2.937E-06"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"856.02435"	"1711.04143"	"1711.04059"	"0.49"	"0.00042"	"16/102"	"16"	"102"	"290607.256164551"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"73.5537"	"24426"	"24426"	"24401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.9"	""	"20.7"	""	"29.5"	""	"45.4"	"0.8"	"86.6"	"57.5"	""	"421"	"58"	"33.000"	"26.000"	"3.2081310467433E-05"	"22"	"0"	"5.924E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"856.02466"	"1711.04204"	"1711.04059"	"0.85"	"0.00072"	"19/102"	"19"	"102"	"577122.394287109"	"HCD"	"MS2"	"0"	"45.7"	"100.000"	"73.8743"	"24557"	"24557"	"24529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.1"	""	"41.3"	""	"57.2"	""	"115.3"	"0.1"	"91.4"	"97.9"	""	"422"	"64"	"33.000"	"26.000"	"8.83654422398807E-06"	"24"	"0"	"2.851E-06"	"1.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"571.01898"	"1711.04239"	"1711.04059"	"1.05"	"0.00060"	"8/102"	"8"	"102"	"332928794.173828"	"HCD"	"MS2"	"3.146863"	"209.4"	"2.991"	"71.8784"	"23794"	"23794"	"23777"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.2"	""	"169.7"	""	"204.6"	""	"505.0"	"0.8"	"470.1"	"549.0"	""	"422"	"55"	"33.000"	"26.000"	"6.0018129367151E-05"	"19"	"0"	"0.0001499"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLASVSTVLTSK"	"[K].fLASVSTVLTSk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"571.01910"	"1711.04276"	"1711.04059"	"1.27"	"0.00072"	"9/102"	"9"	"102"	"272161197.046875"	"HCD"	"MS2"	"3.346239"	"172.0"	"2.918"	"71.9652"	"23778"	"23778"	"23761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.7"	""	"137.2"	""	"172.4"	""	"409.5"	""	"392.8"	"453.6"	""	"422"	"56"	"33.000"	"26.000"	"5.09662236067882E-05"	"18"	"0"	"0.0001641"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAFDWGSSDK"	"[K].lQAFDWGSSDk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"856.45599"	"1711.90471"	"1711.90556"	"-0.49"	"-0.00042"	"9/108"	"9"	"108"	"1629267.21960449"	"HCD"	"MS2"	"39.20749"	"122.1"	"100.000"	"56.5532"	"17550"	"17550"	"17525"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.5"	""	"169.3"	""	"175.1"	""	"227.2"	"0.2"	"207.3"	"212.6"	""	"1010"	"24"	"37.000"	"30.000"	"0.191995645141883"	"18"	"0"	"9.218E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLTLSLQDMASR"	"[K].tFLTLSLQDMASR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.31140"	"1711.91965"	"1711.92502"	"-3.14"	"-0.00179"	"15/128"	"15"	"128"	"2054043.55157471"	"HCD"	"MS2"	"41.2867"	"49.0"	"100.000"	"70.1941"	"23106"	"23106"	"23082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.9"	""	"67.5"	""	"57.7"	""	"116.8"	""	"84.0"	"84.7"	""	"1012"	"25"	"37.000"	"30.000"	"0.163738390406392"	"14"	"0.0001889"	"0.0006713"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLTLSLQDMASR"	"[K].tFLTLSLQDMASR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"571.31189"	"1711.92112"	"1711.92502"	"-2.28"	"-0.00130"	"14/128"	"14"	"128"	"1793211.69085693"	"HCD"	"MS2"	"52.69246"	"41.0"	"100.000"	"70.3156"	"23104"	"23104"	"23075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.4"	""	"50.2"	""	"55.8"	""	"91.9"	"0.7"	"78.4"	"69.8"	""	"1034"	"41"	"37.000"	"30.000"	"0.00442069490561382"	"23"	"7.476E-05"	"0.000189"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLTLSLQDMASR"	"[K].tFLTLSLQDMASR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"856.46429"	"1711.92131"	"1711.92502"	"-2.17"	"-0.00185"	"12/128"	"12"	"128"	"542826.862304688"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"70.2559"	"23079"	"23079"	"23059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.0"	""	"40.0"	""	"53.9"	""	"73.5"	""	"64.1"	"64.0"	""	"1030"	"62"	"37.000"	"30.000"	"3.01166893334408E-05"	"19"	"0"	"3.619E-06"	"1.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLTLSLQDMASR"	"[K].tFLTLSLQDMASR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"856.46466"	"1711.92204"	"1711.92502"	"-1.74"	"-0.00149"	"10/128"	"10"	"128"	"509964.298339844"	"HCD"	"MS2"	"0"	"33.3"	"100.000"	"70.1549"	"23090"	"23090"	"23066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.6"	""	"41.7"	""	"39.7"	""	"59.3"	""	"68.1"	"62.9"	""	"1020"	"39"	"37.000"	"30.000"	"0.00631786259130488"	"20"	"0"	"0.0001831"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"WLNSPNTYMK"	"[].wLNSPNTYMk.[]"	"N-Term(TMT6plex); K10(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"856.46527"	"1711.92327"	"1711.92418"	"-0.54"	"-0.00046"	"5/92"	"5"	"92"	"616951.86126709"	"HCD"	"MS2"	"36.95541"	"61.4"	"100.000"	"51.1222"	"15297"	"15297"	"15266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.7"	""	"85.3"	""	"93.5"	""	"90.5"	"0.3"	"103.5"	"117.5"	""	"1003"	"3"	"37.000"	"30.000"	"27.68668357993"	"15"	"0.00132"	"0.019"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVPLTLTMVHK"	"[K].dVPLTLTMVHk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"3"	"3"	"0.8136"	"0.0000"	"1"	"1"	"1"	"571.34314"	"1712.01487"	"1712.01808"	"-1.88"	"-0.00107"	"17/92"	"17"	"92"	"14699059.1109009"	"HCD"	"MS2"	"39.20968"	"260.9"	"70.169"	"49.1617"	"14552"	"14552"	"14527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"422.8"	""	"353.9"	""	"323.5"	""	"427.9"	"2.1"	"463.3"	"477.1"	""	"597"	"59"	"34.000"	"27.000"	"3.43513916099914E-05"	"27"	"0"	"2.564E-06"	"1.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHLFDIDVPGK"	"[K].iHLFDIDVPGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"3"	"3"	"0.9811"	"0.0000"	"1"	"1"	"1"	"571.34320"	"1712.01505"	"1712.01471"	"0.20"	"0.00011"	"8/84"	"8"	"84"	"6084370.67425537"	"HCD"	"MS2"	"18.23703"	"136.6"	"100.000"	"60.6918"	"19182"	"19182"	"19161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.8"	""	"166.1"	""	"180.8"	""	"253.5"	"0.3"	"270.7"	"231.7"	""	"598"	"53"	"34.000"	"27.000"	"0.000163557772905297"	"17"	"0"	"1.663E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHLFDIDVPGK"	"[K].iHLFDIDVPGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"3"	"3"	"0.9804"	"0.0000"	"1"	"1"	"1"	"571.34326"	"1712.01523"	"1712.01471"	"0.30"	"0.00017"	"8/84"	"8"	"84"	"4964221.47515869"	"HCD"	"MS2"	"17.65473"	"113.2"	"100.000"	"60.7999"	"19280"	"19280"	"19251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.7"	""	"146.7"	""	"151.0"	""	"195.6"	""	"207.2"	"205.1"	""	"600"	"51"	"34.000"	"27.000"	"0.000244974711407578"	"17"	"0"	"1.489E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVPLTLTMVHK"	"[K].dVPLTLTMVHk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"571.34363"	"1712.01633"	"1712.01808"	"-1.02"	"-0.00058"	"17/92"	"17"	"92"	"13965551.387146"	"HCD"	"MS2"	"24.33847"	"320.9"	"100.000"	"48.8842"	"14391"	"14391"	"14367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"527.5"	""	"414.7"	""	"417.6"	""	"518.4"	"1.3"	"577.7"	"580.8"	""	"591"	"60"	"34.000"	"27.000"	"2.989217287338E-05"	"26"	"0"	"5.125E-06"	"1.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVDYTTAK"	"[K].kVVDYTTAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.35669"	"1712.05552"	"1712.05613"	"-0.36"	"-0.00021"	"8/86"	"8"	"86"	"13792362.3394775"	"HCD"	"MS2"	"3.137748"	"852.8"	"100.000"	"32.9683"	"7947"	"7947"	"7926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1191.9"	""	"1294.8"	""	"1307.5"	""	"1166.5"	""	"1549.8"	"1583.0"	""	"324"	"27"	"32.000"	"25.000"	"0.0335362898504149"	"14"	"0.0001859"	"0.0003341"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVDYTTAK"	"[K].kVVDYTTAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.35699"	"1712.05643"	"1712.05613"	"0.17"	"0.00010"	"7/86"	"7"	"86"	"13045855.1396484"	"HCD"	"MS2"	"10.08119"	"769.3"	"100.000"	"32.8799"	"7868"	"7868"	"7848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1153.7"	""	"1171.1"	""	"1202.2"	""	"1053.3"	""	"1325.5"	"1378.5"	""	"312"	"42"	"31.000"	"24.000"	"0.00103068177889185"	"15"	"0"	"0.0001256"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVDYTTAK"	"[K].kVVDYTTAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.53186"	"1712.05644"	"1712.05613"	"0.18"	"0.00016"	"8/86"	"8"	"86"	"371487.740600586"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"32.9715"	"7906"	"7906"	"7880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.4"	""	"48.0"	""	"56.3"	""	"50.5"	"1.8"	"65.7"	"73.0"	""	"312"	"51"	"31.000"	"24.000"	"0.00012945671973225"	"16"	"0.0001308"	"0.0002903"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVDYTTAK"	"[K].kVVDYTTAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.53217"	"1712.05705"	"1712.05613"	"0.54"	"0.00046"	"9/86"	"9"	"86"	"314216.1171875"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"33.0692"	"7989"	"7989"	"7958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.5"	""	"43.7"	""	"41.6"	""	"39.9"	""	"44.3"	"51.4"	""	"318"	"37"	"32.000"	"25.000"	"0.00329911249275331"	"15"	"0.0001889"	"0.0005284"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPQSAFFQGK"	"[K].mNPQSAFFQGk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.96350"	"1712.91973"	"1712.91943"	"0.17"	"0.00015"	"10/98"	"10"	"98"	"608596.466430664"	"HCD"	"MS2"	"0"	"59.4"	"100.000"	"47.9769"	"14020"	"14020"	"13992"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.7"	""	"77.7"	""	"59.6"	""	"82.2"	"0.2"	"109.9"	"120.8"	""	"975"	"52"	"36.000"	"29.000"	"0.000276677995136667"	"16"	"0"	"1.948E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPQSAFFQGK"	"[K].mNPQSAFFQGk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"856.96381"	"1712.92034"	"1712.91943"	"0.53"	"0.00045"	"10/98"	"10"	"98"	"680055.076477051"	"HCD"	"MS2"	"0"	"67.1"	"100.000"	"48.3412"	"14216"	"14216"	"14197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.1"	""	"86.3"	""	"83.6"	""	"87.5"	""	"133.1"	"145.9"	""	"981"	"60"	"36.000"	"29.000"	"4.77132513262602E-05"	"19"	"0"	"7.363E-06"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADIFLASQYK"	"[K].vADIFLASQYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"571.67035"	"1712.99649"	"1712.99873"	"-1.30"	"-0.00074"	"10/94"	"10"	"94"	"3681787.24145508"	"HCD"	"MS2"	"29.49536"	"116.6"	"100.000"	"65.1794"	"21068"	"21068"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.9"	""	"145.7"	""	"147.6"	""	"215.1"	"1.7"	"210.6"	"226.1"	""	"762"	"27"	"35.000"	"28.000"	"0.0847081068338185"	"17"	"0.0001308"	"0.000296"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADIFLASQYK"	"[K].vADIFLASQYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"0"	"2"	"2"	"0.8356"	"0.0000"	"1"	"1"	"1"	"857.00226"	"1712.99724"	"1712.99873"	"-0.87"	"-0.00074"	"10/94"	"10"	"94"	"624972.937011719"	"HCD"	"MS2"	"9.067545"	"54.1"	"100.000"	"65.1840"	"21070"	"21070"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.0"	""	"71.4"	""	"76.9"	""	"97.9"	""	"93.6"	"98.8"	""	"761"	"73"	"35.000"	"28.000"	"1.7392205614846E-06"	""	"0"	"1.151E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADIFLASQYK"	"[K].vADIFLASQYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"857.00269"	"1712.99809"	"1712.99873"	"-0.37"	"-0.00032"	"14/94"	"14"	"94"	"530540.54864502"	"HCD"	"MS2"	"17.78305"	"52.0"	"100.000"	"65.1644"	"21009"	"21009"	"20985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.8"	""	"72.3"	""	"74.7"	""	"84.5"	"1.1"	"93.8"	"91.0"	""	"748"	"35"	"35.000"	"28.000"	"0.0127019851948813"	"23"	"0"	"9.43E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADIFLASQYK"	"[K].vADIFLASQYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"Q5U2V4"	"Phospholipase B-like 1 OS=Rattus norvegicus OX=10116 GN=Plbd1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.67139"	"1712.99961"	"1712.99873"	"0.51"	"0.00029"	"10/94"	"10"	"94"	"3598136.08319092"	"HCD"	"MS2"	"44.70209"	"118.5"	"100.000"	"65.2404"	"21040"	"21040"	"21017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.6"	""	"147.3"	""	"159.4"	""	"214.7"	""	"210.8"	"236.0"	""	"726"	"14"	"35.000"	"28.000"	"1.44180532457407"	"14"	"0.0001308"	"0.0002188"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANLVAATLGAILNR"	"[R].sANLVAATLGAILNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"571.67841"	"1713.02066"	"1713.02203"	"-0.80"	"-0.00046"	"16/150"	"16"	"150"	"556906.606994629"	"HCD"	"MS2"	"37.99113"	"10.8"	"100.000"	"87.0205"	"29949"	"29949"	"29933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"14.3"	""	"17.0"	""	"20.9"	""	"21.7"	"17.3"	""	"550"	"36"	"34.000"	"27.000"	"0.00741878343922354"	"25"	"0"	"1.672E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGIWEPLAVK"	"[K].eLGIWEPLAVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"857.01971"	"1713.03215"	"1713.03511"	"-1.73"	"-0.00148"	"10/90"	"10"	"90"	"2806965.24572754"	"HCD"	"MS2"	"0"	"178.7"	"100.000"	"70.8077"	"23356"	"23356"	"23338"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"253.8"	""	"231.5"	""	"228.7"	""	"296.1"	""	"352.6"	"332.1"	""	"485"	"74"	"33.000"	"26.000"	"1.07080833483178E-06"	"21"	"0"	"1.171E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGIWEPLAVK"	"[K].eLGIWEPLAVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"571.68243"	"1713.03275"	"1713.03511"	"-1.38"	"-0.00079"	"11/90"	"11"	"90"	"5123971.46936035"	"HCD"	"MS2"	"16.59811"	"115.1"	"100.000"	"70.9323"	"23407"	"23407"	"23386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.3"	""	"134.1"	""	"140.7"	""	"229.7"	"0.3"	"213.6"	"226.6"	""	"488"	"27"	"33.000"	"26.000"	"0.0510963439227617"	"16"	"0.0001308"	"0.0002061"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGIWEPLAVK"	"[K].eLGIWEPLAVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"571.68304"	"1713.03458"	"1713.03511"	"-0.31"	"-0.00018"	"10/90"	"10"	"90"	"6284252.37738037"	"HCD"	"MS2"	"7.598197"	"136.9"	"100.000"	"70.9523"	"23364"	"23364"	"23347"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.1"	""	"176.1"	""	"163.2"	""	"247.3"	""	"270.5"	"252.1"	""	"480"	"32"	"33.000"	"26.000"	"0.0139062887142451"	"19"	"0.0001308"	"0.0003011"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGIWEPLAVK"	"[K].eLGIWEPLAVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.9178"	"0.0000"	"1"	"1"	"1"	"857.02142"	"1713.03557"	"1713.03511"	"0.27"	"0.00023"	"9/90"	"9"	"90"	"2983508.89068604"	"HCD"	"MS2"	"0"	"119.7"	"100.000"	"70.9132"	"23348"	"23348"	"23331"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.8"	""	"150.6"	""	"151.0"	""	"196.6"	""	"250.8"	"229.1"	""	"470"	"73"	"33.000"	"26.000"	"1.05941925567243E-06"	"23"	"0"	"9.357E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDPALWTIQK"	"[K].aLDPALWTIQk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"572.01367"	"1714.02646"	"1714.03036"	"-2.28"	"-0.00130"	"14/92"	"14"	"92"	"9790220.27502441"	"HCD"	"MS2"	"0"	"218.7"	"100.000"	"66.9935"	"21808"	"21808"	"21795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"254.3"	""	"265.1"	""	"252.0"	""	"421.8"	"1.9"	"427.6"	"453.1"	""	"579"	"29"	"34.000"	"27.000"	"0.0344071394843017"	"17"	"0"	"0.0001692"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDPALWTIQK"	"[K].aLDPALWTIQk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"572.01373"	"1714.02665"	"1714.03036"	"-2.17"	"-0.00124"	"14/92"	"14"	"92"	"8381178.2276001"	"HCD"	"MS2"	"0"	"188.6"	"100.000"	"67.1001"	"21799"	"21799"	"21789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.0"	""	"232.4"	""	"222.1"	""	"371.2"	"1.5"	"375.6"	"370.8"	""	"575"	"28"	"34.000"	"27.000"	"0.0465198010822381"	"18"	"0"	"0.0001029"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDPALWTIQK"	"[K].aLDPALWTIQk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"572.01398"	"1714.02738"	"1714.03036"	"-1.74"	"-0.00100"	"12/92"	"12"	"92"	"10732614.3989868"	"HCD"	"MS2"	"0"	"193.2"	"77.096"	"67.2730"	"21915"	"21915"	"21906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.7"	""	"209.3"	""	"231.5"	""	"351.7"	""	"399.1"	"446.2"	""	"570"	"26"	"34.000"	"27.000"	"0.0661979986961775"	"17"	"0"	"0.0001819"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDPALWTIQK"	"[K].aLDPALWTIQk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"572.01440"	"1714.02866"	"1714.03036"	"-0.99"	"-0.00057"	"12/92"	"12"	"92"	"8199605.10046387"	"HCD"	"MS2"	"0"	"186.7"	"100.000"	"67.4345"	"21930"	"21930"	"21918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.2"	""	"214.6"	""	"212.7"	""	"350.2"	"1.7"	"394.0"	"412.7"	""	"582"	"31"	"34.000"	"27.000"	"0.0247681169116892"	"17"	"0"	"8.961E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDPALWTIQK"	"[K].aLDPALWTIQk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"857.51819"	"1714.02910"	"1714.03036"	"-0.74"	"-0.00063"	"9/92"	"9"	"92"	"4223486.43023682"	"HCD"	"MS2"	"0"	"264.8"	"100.000"	"67.2774"	"21916"	"21916"	"21906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.5"	""	"301.0"	""	"298.0"	""	"488.6"	""	"533.8"	"632.1"	""	"567"	"52"	"34.000"	"27.000"	"0.000197039394036424"	"23"	"0"	"1.348E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDPALWTIQK"	"[K].aLDPALWTIQk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"857.51855"	"1714.02983"	"1714.03036"	"-0.31"	"-0.00027"	"18/92"	"18"	"92"	"7097890.4498291"	"HCD"	"MS2"	"0"	"423.6"	"100.000"	"67.3475"	"21898"	"21898"	"21885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"457.5"	"2.9"	"496.7"	""	"508.3"	""	"737.5"	"4.5"	"838.2"	"979.1"	""	"565"	"61"	"34.000"	"27.000"	"2.07022930611741E-05"	"23"	"0"	"1.181E-05"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDPALWTIQK"	"[K].aLDPALWTIQk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"857.51880"	"1714.03032"	"1714.03036"	"-0.02"	"-0.00002"	"16/92"	"16"	"92"	"3732892.68145752"	"HCD"	"MS2"	"0"	"241.0"	"100.000"	"66.9983"	"21810"	"21810"	"21795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.5"	""	"289.5"	""	"265.4"	""	"475.9"	""	"474.3"	"521.3"	""	"562"	"48"	"34.000"	"27.000"	"0.000427273855854831"	"22"	"0"	"0.0001035"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDPALWTIQK"	"[K].aLDPALWTIQk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"857.52020"	"1714.03313"	"1714.03036"	"1.61"	"0.00138"	"18/92"	"18"	"92"	"2206699.41412354"	"HCD"	"MS2"	"0"	"153.3"	"100.000"	"67.0679"	"21786"	"21786"	"21769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.4"	""	"190.8"	""	"176.3"	""	"286.3"	"0.9"	"288.8"	"337.7"	""	"542"	"63"	"34.000"	"27.000"	"1.29708755019435E-05"	"22"	"0"	"6.874E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWFWDFATR"	"[R].kWFWDFATR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.32050"	"1714.94693"	"1714.94697"	"-0.02"	"-0.00001"	"8/86"	"8"	"86"	"4803936.92126465"	"HCD"	"MS2"	"19.08396"	"229.3"	"100.000"	"62.7336"	"20016"	"20016"	"19993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"389.9"	""	"413.5"	""	"334.0"	""	"394.1"	"0.9"	"324.7"	"306.6"	""	"952"	"14"	"36.000"	"29.000"	"1.76038213575407"	"13"	"0.0001889"	"0.0004771"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWFWDFATR"	"[R].kWFWDFATR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.32092"	"1714.94822"	"1714.94697"	"0.73"	"0.00042"	"7/86"	"7"	"86"	"5227390.53759766"	"HCD"	"MS2"	"22.32896"	"243.7"	"100.000"	"62.8289"	"20108"	"20108"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"419.4"	""	"452.7"	""	"327.8"	""	"418.2"	"4.9"	"340.8"	"335.7"	""	"953"	"13"	"36.000"	"29.000"	"2.56485551369012"	"13"	"0.0001889"	"0.0005886"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAINVNDSVTK"	"[K].vPAINVNDSVTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.9868"	"0.0000"	"1"	"1"	"1"	"858.00739"	"1715.00749"	"1715.01036"	"-1.67"	"-0.00143"	"10/108"	"10"	"108"	"890830.066101074"	"HCD"	"MS2"	"0"	"55.2"	"100.000"	"43.7632"	"12302"	"12302"	"12280"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.0"	""	"74.9"	""	"73.3"	""	"92.6"	""	"91.5"	"95.2"	""	"722"	"76"	"35.000"	"28.000"	"9.64955313527454E-07"	"19"	"0"	"2.817E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAINVNDSVTK"	"[K].vPAINVNDSVTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.9136"	"0.0000"	"1"	"1"	"1"	"858.00745"	"1715.00762"	"1715.01036"	"-1.60"	"-0.00137"	"10/108"	"10"	"108"	"793511.40447998"	"HCD"	"MS2"	"0"	"47.3"	"100.000"	"44.0269"	"12459"	"12459"	"12431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.0"	""	"68.4"	""	"60.7"	""	"70.5"	""	"78.9"	"89.7"	""	"727"	"81"	"35.000"	"28.000"	"3.20261265338414E-07"	"24"	"0"	"2.465E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAANILSQESK"	"[K].vPAANILSQESk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"858.00763"	"1715.00798"	"1715.01036"	"-1.38"	"-0.00119"	"8/108"	"8"	"108"	"432192.867004395"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"44.7404"	"12700"	"12700"	"12673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.5"	""	"39.7"	""	"52.2"	""	"52.0"	"0.5"	"67.8"	"59.3"	""	"724"	"56"	"35.000"	"28.000"	"9.28343221219415E-05"	"16"	"0"	"0.0001453"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAINVNDSVTK"	"[K].vPAINVNDSVTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"572.34100"	"1715.00846"	"1715.01036"	"-1.11"	"-0.00063"	"11/108"	"11"	"108"	"7815793.19299316"	"HCD"	"MS2"	"26.11374"	"331.4"	"100.000"	"44.1256"	"12499"	"12499"	"12476"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"489.2"	""	"434.9"	""	"440.3"	""	"537.5"	""	"609.4"	"628.7"	""	"712"	"37"	"35.000"	"28.000"	"0.00673674328237612"	"22"	"0"	"4.075E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAINVNDSVTK"	"[K].vPAINVNDSVTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.34131"	"1715.00937"	"1715.01036"	"-0.57"	"-0.00033"	"8/108"	"8"	"108"	"6135688.95684814"	"HCD"	"MS2"	"30.20243"	"287.6"	"100.000"	"44.0500"	"12419"	"12419"	"12390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"369.9"	""	"328.3"	""	"367.5"	""	"510.5"	""	"571.7"	"581.7"	""	"706"	"19"	"35.000"	"28.000"	"0.471818217340894"	"14"	"0.0004557"	"0.002569"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAINVNDSVTK"	"[K].vPAINVNDSVTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.9178"	"0.0000"	"1"	"1"	"1"	"858.00897"	"1715.01067"	"1715.01036"	"0.18"	"0.00016"	"9/108"	"9"	"108"	"310104.195983887"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"44.0914"	"12436"	"12436"	"12406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.6"	""	"35.1"	""	"35.5"	""	"34.7"	""	"41.9"	"44.8"	""	"684"	"73"	"35.000"	"28.000"	"1.64447057169807E-06"	"23"	"0"	"0.0001506"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPAANILSQESK"	"[K].vPAANILSQESk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"572.34174"	"1715.01065"	"1715.01036"	"0.17"	"0.00010"	"9/108"	"9"	"108"	"4540035.45495605"	"HCD"	"MS2"	"15.36359"	"248.8"	"100.000"	"44.9975"	"12854"	"12854"	"12827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"368.3"	""	"351.5"	""	"335.4"	""	"380.0"	""	"436.1"	"487.1"	""	"684"	"27"	"35.000"	"28.000"	"0.0674568575751279"	"17"	"0.0001889"	"0.0005307"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDPALWTIQK"	"[K].aLDPALWTIqk.[V]"	"N-Term(TMT6plex); Q10(Deamidated); K11(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"858.01813"	"1715.02898"	"1715.01438"	"8.51"	"0.00730"	"7/92"	"7"	"92"	"3140002.66845703"	"HCD"	"MS2"	"0"	"212.5"	"100.000"	"66.9844"	"21805"	"21805"	"21779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"230.8"	""	"269.0"	""	"241.8"	""	"409.3"	""	"430.4"	"439.6"	""	"602"	"28"	"34.000"	"27.000"	"0.0502998274907523"	"20"	"0.0001889"	"0.0005105"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTLSALDILIK"	"[K].lGTLSALDILIk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.4318"	"0.0000"	"1"	"1"	"1"	"572.37274"	"1715.10367"	"1715.10828"	"-2.69"	"-0.00154"	"11/98"	"11"	"98"	"1073693.690979"	"HCD"	"MS2"	"33.05738"	"30.0"	"100.000"	"86.8191"	"29868"	"29868"	"29846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.4"	""	"40.9"	""	"47.1"	""	"50.8"	""	"55.1"	"50.4"	""	"192"	"44"	"29.000"	"22.000"	"0.00035178007166192"	""	"0"	"0.0001235"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTLSALDILIK"	"[K].lGTLSALDILIk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.5143"	"0.0000"	"1"	"1"	"1"	"572.37299"	"1715.10440"	"1715.10828"	"-2.26"	"-0.00129"	"13/98"	"13"	"98"	"981870.3046875"	"HCD"	"MS2"	"15.43233"	"29.8"	"100.000"	"86.7399"	"29784"	"29784"	"29761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.8"	""	"38.2"	""	"39.7"	""	"54.0"	""	"52.4"	"57.7"	""	"192"	"35"	"29.000"	"22.000"	"0.00289915365158593"	""	"7.476E-05"	"0.000201"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTLSALDILIK"	"[K].lGTLSALDILIk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"858.05695"	"1715.10661"	"1715.10828"	"-0.97"	"-0.00083"	"12/98"	"12"	"98"	"288373.17578125"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"86.7959"	"29859"	"29859"	"29830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.7"	""	"29.6"	""	"44.5"	""	"41.0"	""	"37.3"	"36.9"	""	"176"	"41"	"29.000"	"22.000"	"0.000743845383741056"	""	"0"	"0.0001746"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTLSALDILIK"	"[K].lGTLSALDILIk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"858.05701"	"1715.10674"	"1715.10828"	"-0.90"	"-0.00077"	"11/98"	"11"	"98"	"199782.262145996"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"86.6796"	"29760"	"29760"	"29732"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.3"	""	"20.3"	""	"22.9"	""	"28.4"	""	"26.8"	"31.9"	""	"176"	"28"	"29.000"	"22.000"	"0.0147394973090326"	"19"	"0.0003839"	"0.001788"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTLSALDILIK"	"[K].lGTLSALDILIk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"5"	"858.05756"	"1715.10784"	"1715.10828"	"-0.26"	"-0.00022"	"6/98"	"6"	"98"	"83323.7589111328"	"HCD"	"MS2"	"24.90606"	"6.8"	"100.000"	"87.0076"	"29893"	"29893"	"29870"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"8.3"	""	"10.2"	""	"11.2"	""	"14.0"	"13.2"	""	"166"	"7"	"29.000"	"22.000"	"1.79505637469343"	"13"	"0.004291"	"0.1108"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLEVADILEK"	"[K].dLLEVADILEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"572.67749"	"1716.01792"	"1716.01952"	"-0.94"	"-0.00054"	"11/98"	"11"	"98"	"464138.821350098"	"HCD"	"MS2"	"16.45066"	"19.5"	"100.000"	"82.7415"	"28214"	"28214"	"28189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.3"	""	"21.3"	""	"29.1"	""	"34.0"	"0.9"	"40.7"	"41.2"	""	"708"	"48"	"35.000"	"28.000"	"0.000537035830080606"	"18"	"0"	"6.819E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALNRPPTYPTK"	"[K].aLNRPPTYPTk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.67749"	"1716.01792"	"1716.02086"	"-1.72"	"-0.00098"	"6/102"	"6"	"102"	"5446437.90698242"	"HCD"	"MS2"	"25.06484"	"310.9"	"100.000"	"31.7159"	"7392"	"7392"	"7366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"465.8"	""	"420.8"	""	"416.2"	""	"452.3"	"4.0"	"606.6"	"581.3"	""	"708"	"21"	"35.000"	"28.000"	"0.268536461560331"	"14"	"0"	"0.0001187"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLEVADILEK"	"[K].dLLEVADILEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"858.51282"	"1716.01836"	"1716.01952"	"-0.68"	"-0.00058"	"11/98"	"11"	"98"	"121054.063354492"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"82.7830"	"28231"	"28231"	"28205"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"8.6"	""	"10.5"	""	"12.5"	""	"20.2"	"27.6"	""	"704"	"39"	"35.000"	"28.000"	"0.00478126333198678"	"27"	"0.0001889"	"0.0004071"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLEVADILEK"	"[K].dLLEVADILEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"572.67786"	"1716.01902"	"1716.01952"	"-0.30"	"-0.00017"	"12/98"	"12"	"98"	"321076.686218262"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"82.8044"	"28189"	"28189"	"28160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.0"	""	"12.9"	""	"17.9"	""	"26.7"	""	"24.4"	"30.2"	""	"719"	"49"	"35.000"	"28.000"	"0.000438226760813489"	"23"	"0"	"6.05E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALNRPPTYPTK"	"[K].aLNRPPTYPTk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.67804"	"1716.01957"	"1716.02086"	"-0.76"	"-0.00043"	"6/102"	"6"	"102"	"5690638.50427246"	"HCD"	"MS2"	"19.73885"	"301.6"	"100.000"	"31.8601"	"7493"	"7493"	"7466"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"440.6"	""	"429.4"	""	"424.3"	""	"435.3"	""	"574.2"	"555.0"	""	"717"	"19"	"35.000"	"28.000"	"0.49372959459848"	"14"	"0"	"5.794E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVEAPFIPK"	"[R].kVEAPFIPk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.70526"	"1716.10123"	"1716.10269"	"-0.85"	"-0.00049"	"12/80"	"12"	"80"	"58428133.1569824"	"HCD"	"MS2"	"33.64307"	"736.5"	"31.985"	"40.8228"	"11111"	"11111"	"11093"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1038.9"	""	"1047.3"	""	"1051.6"	""	"1214.3"	"0.8"	"1292.2"	"1328.2"	""	"256"	"22"	"31.000"	"24.000"	"0.0792884576098281"	"14"	"0.0001308"	"0.0002925"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVEAPFIPK"	"[R].kVEAPFIPk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.70563"	"1716.10233"	"1716.10269"	"-0.21"	"-0.00012"	"12/80"	"12"	"80"	"49258817.6065674"	"HCD"	"MS2"	"31.16755"	"874.7"	"47.530"	"41.0108"	"11232"	"11232"	"11213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1238.3"	""	"1257.7"	""	"1229.6"	""	"1445.4"	"3.8"	"1537.0"	"1570.1"	""	"230"	"22"	"30.000"	"23.000"	"0.0713999389364573"	"14"	"7.476E-05"	"0.0002001"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLTEVLLPVVK"	"[K].fLTEVLLPVVk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5EB59"	"Mediator of RNA polymerase II transcription subunit 23 OS=Rattus norvegicus OX=10116 GN=Med23 PE=2 SV=2"	"Q5EB59"	"Mediator of RNA polymerase II transcription subunit 23 OS=Rattus norvegicus OX=10116 GN=Med23 PE=2 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"858.55591"	"1716.10454"	"1716.10755"	"-1.75"	"-0.00151"	"7/82"	"7"	"82"	"77842.8667602539"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"85.8133"	"29462"	"29462"	"29437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.6"	""	"4.6"	""	"9.5"	""	"9.9"	""	"8.5"	"9.8"	""	"224"	"21"	"30.000"	"23.000"	"0.0982240919680871"	"18"	"0.001966"	"0.03092"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTGDNMFFIK"	"[K].wTGDNMFFIk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8B0"	"Oxidation resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Oxr1 PE=1 SV=3"	"Q4V8B0"	"Oxidation resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Oxr1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"858.96130"	"1716.91533"	"1716.91837"	"-1.77"	"-0.00152"	"6/86"	"6"	"86"	"378152.123962402"	"HCD"	"MS2"	"0"	"44.3"	"100.000"	"71.6851"	"23663"	"23663"	"23635"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.0"	""	"63.4"	""	"63.7"	""	"60.6"	""	"78.9"	"93.1"	""	"1033"	"16"	"37.000"	"30.000"	"1.23046800592376"	"14"	"0.0008125"	"0.007687"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFMASEILPPTLR"	"[K].iFMASEILPPTLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50904"	"Ras GTPase-activating protein 1 OS=Rattus norvegicus OX=10116 GN=Rasa1 PE=3 SV=1"	"P50904"	"Ras GTPase-activating protein 1 OS=Rattus norvegicus OX=10116 GN=Rasa1 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"858.99872"	"1716.99016"	"1716.99198"	"-1.06"	"-0.00091"	"5/108"	"5"	"108"	"290068.149841309"	"HCD"	"MS2"	"43.52318"	"20.0"	"100.000"	"77.7391"	"26174"	"26174"	"26149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.8"	""	"27.0"	""	"29.2"	""	"29.8"	""	"38.3"	"41.1"	""	"888"	"18"	"36.000"	"29.000"	"0.634428917578929"	"14"	"0.0003571"	"0.001527"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFMASEILPPTLR"	"[K].iFMASEILPPTLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50904"	"Ras GTPase-activating protein 1 OS=Rattus norvegicus OX=10116 GN=Rasa1 PE=3 SV=1"	"P50904"	"Ras GTPase-activating protein 1 OS=Rattus norvegicus OX=10116 GN=Rasa1 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"858.99884"	"1716.99040"	"1716.99198"	"-0.92"	"-0.00079"	"6/108"	"6"	"108"	"281253.422119141"	"HCD"	"MS2"	"36.12278"	"21.2"	"100.000"	"77.7633"	"26133"	"26133"	"26105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.8"	""	"30.0"	""	"33.8"	""	"27.8"	""	"43.7"	"39.3"	""	"888"	"34"	"36.000"	"29.000"	"0.0161206656317925"	"15"	"0"	"5.648E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFMASEILPPTLR"	"[K].iFMASEILPPTLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50904"	"Ras GTPase-activating protein 1 OS=Rattus norvegicus OX=10116 GN=Rasa1 PE=3 SV=1"	"P50904"	"Ras GTPase-activating protein 1 OS=Rattus norvegicus OX=10116 GN=Rasa1 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.00201"	"1716.99149"	"1716.99198"	"-0.29"	"-0.00016"	"13/108"	"13"	"108"	"900733.15625"	"HCD"	"MS2"	"39.6219"	"25.8"	"100.000"	"77.7874"	"26194"	"26194"	"26165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.0"	""	"30.0"	""	"32.2"	""	"48.0"	""	"53.1"	"49.6"	""	"884"	"16"	"36.000"	"29.000"	"1.20066615682687"	"13"	"0"	"0.0001229"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFGPGLEGGLVNK"	"[R].aFGPGLEGGLVNk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"573.00543"	"1717.00174"	"1717.00488"	"-1.82"	"-0.00104"	"10/98"	"10"	"98"	"5847521.42468262"	"HCD"	"MS2"	"26.17822"	"170.7"	"100.000"	"52.1720"	"15726"	"15726"	"15698"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"242.3"	""	"214.1"	""	"230.5"	""	"300.0"	""	"267.7"	"362.7"	""	"847"	"45"	"36.000"	"29.000"	"0.00150263470340419"	"22"	"0"	"1.036E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFGPGLEGGLVNK"	"[R].aFGPGLEGGLVNk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.00580"	"1717.00284"	"1717.00488"	"-1.19"	"-0.00068"	"8/98"	"8"	"98"	"4466455.25762939"	"HCD"	"MS2"	"2.662306"	"157.7"	"100.000"	"52.4001"	"15869"	"15869"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.3"	""	"207.0"	""	"197.5"	""	"264.4"	""	"268.8"	"363.4"	""	"829"	"40"	"36.000"	"29.000"	"0.00434034783167098"	"15"	"0"	"1.538E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFGPGLEGGLVNK"	"[R].aFGPGLEGGLVNk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9114"	"0.0000"	"1"	"1"	"1"	"859.00568"	"1717.00408"	"1717.00488"	"-0.47"	"-0.00040"	"19/98"	"19"	"98"	"768026.768371582"	"HCD"	"MS2"	"0"	"70.2"	"100.000"	"52.2134"	"15743"	"15743"	"15714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.5"	""	"87.5"	""	"95.8"	""	"87.4"	"1.1"	"114.0"	"183.0"	""	"845"	"79"	"36.000"	"29.000"	"5.24598099957793E-07"	"25"	"0"	"6.25E-06"	"1.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFGPGLEGGLVNK"	"[R].aFGPGLEGGLVNk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9390"	"0.0000"	"1"	"1"	"1"	"859.00592"	"1717.00456"	"1717.00488"	"-0.18"	"-0.00016"	"12/98"	"12"	"98"	"866713.344604492"	"HCD"	"MS2"	"0"	"77.7"	"100.000"	"52.3747"	"15859"	"15859"	"15830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.8"	""	"93.4"	""	"118.9"	""	"103.7"	"1.3"	"131.7"	"187.4"	""	"835"	"82"	"36.000"	"29.000"	"2.4754632301215E-07"	"23"	"0"	"2.567E-06"	"1.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDGIIADVK"	"[R].sLDLDGIIADVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"859.01080"	"1717.01433"	"1717.01477"	"-0.26"	"-0.00022"	"20/106"	"20"	"106"	"1037802.17370605"	"HCD"	"MS2"	"0"	"81.7"	"100.000"	"75.0550"	"25090"	"25090"	"25071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.7"	""	"104.4"	""	"142.1"	""	"117.1"	""	"134.7"	"180.1"	""	"811"	"82"	"36.000"	"29.000"	"2.78606252425771E-07"	"24"	"0"	"1.477E-06"	"1.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDGIIADVK"	"[R].sLDLDGIIADVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.9205"	"0.0000"	"1"	"1"	"1"	"859.01111"	"1717.01494"	"1717.01477"	"0.10"	"0.00008"	"11/106"	"11"	"106"	"1113693.94470215"	"HCD"	"MS2"	"0"	"91.4"	"100.000"	"74.7553"	"24968"	"24968"	"24943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.4"	""	"127.0"	""	"138.4"	""	"148.2"	""	"140.9"	"185.4"	""	"801"	"88"	"36.000"	"29.000"	"6.39149598468312E-08"	"25"	"0"	"3.921E-07"	"1.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDGIIADVK"	"[R].sLDLDGIIADVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.8736"	"0.0000"	"1"	"1"	"1"	"859.01135"	"1717.01543"	"1717.01477"	"0.38"	"0.00033"	"11/106"	"11"	"106"	"1028630.67785645"	"HCD"	"MS2"	"0"	"87.7"	"100.000"	"75.0693"	"25044"	"25044"	"25025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.9"	""	"112.7"	""	"133.2"	""	"144.5"	"0.7"	"140.5"	"190.8"	""	"799"	"87"	"36.000"	"29.000"	"7.28646333076695E-08"	"29"	"0"	"3.812E-06"	"1.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDGIIADVK"	"[R].sLDLDGIIADVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"859.01141"	"1717.01555"	"1717.01477"	"0.45"	"0.00039"	"11/106"	"11"	"106"	"1310849.25183105"	"HCD"	"MS2"	"0"	"102.9"	"100.000"	"74.7717"	"24923"	"24923"	"24897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"138.7"	""	"139.2"	""	"165.3"	""	"167.2"	""	"166.9"	"204.1"	""	"799"	"88"	"36.000"	"29.000"	"5.76125082934186E-08"	"28"	"0"	"4.696E-07"	"1.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDGIIADVK"	"[R].sLDLDGIIADVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"3"	"3"	"0.8594"	"0.0000"	"1"	"1"	"1"	"573.01013"	"1717.01584"	"1717.01477"	"0.62"	"0.00036"	"9/106"	"9"	"106"	"11260082.4661865"	"HCD"	"MS2"	"5.911733"	"219.5"	"77.109"	"74.8958"	"25025"	"25025"	"25007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"296.1"	""	"276.3"	"3.0"	"335.3"	""	"359.9"	""	"346.8"	"462.7"	""	"797"	"64"	"36.000"	"29.000"	"1.65359185989794E-05"	"26"	"0"	"4.021E-05"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDGIIADVK"	"[R].sLDLDGIIADVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"3"	"3"	"0.8873"	"0.0000"	"1"	"1"	"1"	"573.01013"	"1717.01584"	"1717.01477"	"0.62"	"0.00036"	"10/106"	"10"	"106"	"10609164.4078369"	"HCD"	"MS2"	"5.611718"	"282.0"	"100.000"	"74.8663"	"24962"	"24962"	"24945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"396.1"	""	"362.2"	""	"450.0"	""	"426.0"	"4.9"	"451.6"	"579.3"	""	"797"	"71"	"36.000"	"29.000"	"3.10047565589362E-06"	"25"	"0"	"7.431E-06"	"1.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLmAYmASk.[E]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"859.46448"	"1717.92168"	"1717.92689"	"-3.03"	"-0.00260"	"9/94"	"9"	"94"	"601998.593566895"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"46.2935"	"13331"	"13331"	"13304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.3"	""	"43.9"	""	"48.6"	""	"130.3"	"1.6"	"79.0"	"90.1"	""	"1048"	"56"	"37.000"	"30.000"	"0.000143989653622566"	"20"	"0.0004166"	"0.00232"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLmAYmASk.[E]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"859.46576"	"1717.92424"	"1717.92689"	"-1.54"	"-0.00132"	"9/94"	"9"	"94"	"649551.565185547"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"46.5531"	"13485"	"13485"	"13459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.6"	""	"41.1"	""	"49.3"	""	"134.2"	"0.1"	"82.4"	"101.2"	""	"1056"	"60"	"37.000"	"30.000"	"5.54158402328426E-05"	"16"	"0.0001889"	"0.0009401"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLmAYmASk.[E]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"859.46625"	"1717.92522"	"1717.92689"	"-0.97"	"-0.00083"	"10/94"	"10"	"94"	"378119.091308594"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"46.8654"	"13613"	"13613"	"13586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.1"	""	"27.9"	""	"34.9"	""	"81.7"	"0.3"	"58.3"	"62.5"	""	"1063"	"52"	"37.000"	"30.000"	"0.000318788957029803"	"20"	"0.0003146"	"0.001406"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASK"	"[R].vVDLmAYmASk.[E]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"859.46667"	"1717.92607"	"1717.92689"	"-0.47"	"-0.00041"	"7/94"	"7"	"94"	"398352.668518066"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"46.6080"	"13460"	"13460"	"13432"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.8"	""	"38.1"	""	"33.3"	""	"73.5"	"1.6"	"55.9"	"58.4"	""	"1071"	"23"	"37.000"	"30.000"	"0.261673338428087"	"18"	"0.00103"	"0.01171"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVAGVPAEFSIWTR"	"[R].gVAGVPAEFSIWTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"859.97394"	"1718.94060"	"1718.94272"	"-1.23"	"-0.00106"	"21/114"	"21"	"114"	"1056749.97479248"	"HCD"	"MS2"	"10.91154"	"60.3"	"100.000"	"66.5999"	"21648"	"21648"	"21619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.7"	""	"72.3"	""	"84.0"	""	"71.4"	""	"108.5"	"152.5"	""	"1089"	"42"	"37.000"	"30.000"	"0.00375835573191012"	"18"	"0.0001308"	"0.0002456"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVAGVPAEFSIWTR"	"[R].gVAGVPAEFSIWTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"859.97406"	"1718.94084"	"1718.94272"	"-1.09"	"-0.00094"	"10/114"	"10"	"114"	"924485.387084961"	"HCD"	"MS2"	"0"	"52.3"	"100.000"	"66.7275"	"21647"	"21647"	"21625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.5"	""	"73.6"	""	"68.5"	""	"62.4"	"0.9"	"91.9"	"120.3"	""	"1107"	"33"	"37.000"	"30.000"	"0.0275497476535841"	"16"	"0.0001308"	"0.0003131"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVAGVPAEFSIWTR"	"[R].gVAGVPAEFSIWTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"573.65247"	"1718.94284"	"1718.94272"	"0.07"	"0.00004"	"9/114"	"9"	"114"	"1076357.07183838"	"HCD"	"MS2"	"32.54424"	"43.6"	"100.000"	"66.8242"	"21687"	"21687"	"21657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.3"	""	"49.4"	""	"60.0"	""	"68.6"	"1.0"	"85.3"	"92.6"	""	"1084"	"18"	"37.000"	"30.000"	"0.794326929798104"	"16"	"0.0001889"	"0.0006445"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQDWITPEK"	"[R].mLQDWITPEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"3"	"3"	"0.4211"	"0.0000"	"1"	"1"	"1"	"573.65619"	"1718.95401"	"1718.95515"	"-0.66"	"-0.00038"	"10/96"	"10"	"96"	"4498987.31542969"	"HCD"	"MS2"	"41.45425"	"128.3"	"100.000"	"63.1007"	"20219"	"20219"	"20195"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.4"	""	"202.4"	""	"174.9"	""	"173.0"	"1.6"	"249.6"	"241.2"	""	"1093"	"19"	"37.000"	"30.000"	"0.768404971936998"	"25"	"0.0001859"	"0.0003274"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIATYYGAFIK"	"[R].nIATYYGAFIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1LP90"	"Misshapen-like kinase 1 OS=Rattus norvegicus OX=10116 GN=Mink1 PE=1 SV=2"	"F1LP90"	"Misshapen-like kinase 1 OS=Rattus norvegicus OX=10116 GN=Mink1 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"573.65643"	"1718.95475"	"1718.98816"	"-19.44"	"-0.01114"	"7/100"	"7"	"100"	"4041157.85620117"	"HCD"	"MS2"	"51.48289"	"122.3"	"100.000"	"63.0491"	"20145"	"20145"	"20121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.4"	""	"163.1"	""	"193.9"	""	"173.3"	"0.8"	"225.2"	"241.0"	""	"1102"	"21"	"37.000"	"30.000"	"0.474407557453715"	"20"	"0.0003571"	"0.001506"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPENPPSmVFk.[Q]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"859.98108"	"1718.95488"	"1718.95515"	"-0.16"	"-0.00013"	"6/102"	"6"	"102"	"292179.987548828"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"41.6873"	"11466"	"11466"	"11435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.6"	""	"27.6"	""	"33.7"	""	"33.1"	""	"42.7"	"38.6"	""	"1102"	"32"	"37.000"	"30.000"	"0.0311997848260078"	"15"	"0.002683"	"0.03999"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQDWITPEK"	"[R].mLQDWITPEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"859.98126"	"1718.95525"	"1718.95515"	"0.06"	"0.00005"	"7/96"	"7"	"96"	"977307.711914063"	"HCD"	"MS2"	"17.04064"	"87.0"	"100.000"	"62.9478"	"20104"	"20104"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.0"	""	"120.3"	""	"124.1"	""	"107.9"	""	"171.9"	"184.0"	""	"1102"	"25"	"37.000"	"30.000"	"0.168714185196356"	"21"	"0.0001859"	"0.0003498"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQDWITPEK"	"[R].mLQDWITPEk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"859.98169"	"1718.95610"	"1718.95515"	"0.55"	"0.00048"	"11/96"	"11"	"96"	"1398446.22241211"	"HCD"	"MS2"	"12.92678"	"114.5"	"100.000"	"63.0754"	"20209"	"20209"	"20179"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.4"	""	"150.4"	""	"158.0"	""	"150.8"	"2.2"	"221.4"	"233.8"	""	"1089"	"37"	"37.000"	"30.000"	"0.0110916941131077"	"26"	"0.0001308"	"0.000269"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPENPPSMVFK"	"[K].vPENPPSmVFk.[Q]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"859.98260"	"1718.95793"	"1718.95515"	"1.62"	"0.00139"	"8/102"	"8"	"102"	"1114541.49694824"	"HCD"	"MS2"	"0"	"67.0"	"100.000"	"41.6367"	"11489"	"11489"	"11461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.8"	""	"88.8"	""	"96.9"	""	"111.4"	"0.9"	"126.2"	"113.7"	""	"1077"	"39"	"37.000"	"30.000"	"0.00635602662298456"	"18"	"0.0003839"	"0.001788"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIATYYGAFIK"	"[R].nIATYYGAFIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1LP90"	"Misshapen-like kinase 1 OS=Rattus norvegicus OX=10116 GN=Mink1 PE=1 SV=2"	"F1LP90"	"Misshapen-like kinase 1 OS=Rattus norvegicus OX=10116 GN=Mink1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.66846"	"1718.99082"	"1718.98816"	"1.54"	"0.00088"	"6/100"	"6"	"100"	"2734279.14422607"	"HCD"	"MS2"	"38.92092"	"100.1"	"100.000"	"63.1340"	"20180"	"20180"	"20153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.8"	""	"136.7"	""	"144.1"	""	"148.2"	"1.3"	"197.3"	"200.4"	""	"953"	"17"	"36.000"	"29.000"	"0.903780371457112"	"14"	"0.0001889"	"0.0004041"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIATYYGAFIK"	"[R].nIATYYGAFIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1LP90"	"Misshapen-like kinase 1 OS=Rattus norvegicus OX=10116 GN=Mink1 PE=1 SV=2"	"F1LP90"	"Misshapen-like kinase 1 OS=Rattus norvegicus OX=10116 GN=Mink1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.66852"	"1718.99100"	"1718.98816"	"1.65"	"0.00095"	"11/100"	"11"	"100"	"1767383.62591553"	"HCD"	"MS2"	"21.45685"	"70.5"	"100.000"	"63.3097"	"20305"	"20305"	"20275"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.7"	""	"98.8"	""	"105.4"	""	"102.1"	""	"129.6"	"145.3"	""	"955"	"11"	"36.000"	"29.000"	"3.56429282140807"	"13"	"0.0003839"	"0.001986"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKYEMYLK"	"[K].gkYEMYLk.[V]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.67548"	"1719.01187"	"1719.01183"	"0.03"	"0.00002"	"5/68"	"5"	"68"	"28740752.463501"	"HCD"	"MS2"	"28.50639"	"769.6"	"41.170"	"39.3265"	"10544"	"10544"	"10526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1487.3"	""	"1364.7"	""	"910.5"	""	"1056.1"	""	"1196.8"	"1256.5"	""	"811"	"8"	"36.000"	"29.000"	"5.88831260931829"	"13"	"0.0002277"	"0.001274"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDDMVAQVLK"	"[R].lIDDmVAQVLk.[S]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"860.01013"	"1719.01299"	"1719.01266"	"0.19"	"0.00016"	"10/88"	"10"	"88"	"819860.328430176"	"HCD"	"MS2"	"10.20241"	"62.0"	"100.000"	"60.2764"	"19066"	"19066"	"19043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.6"	""	"77.2"	""	"82.5"	""	"139.0"	"1.9"	"104.0"	"106.9"	""	"794"	"74"	"35.000"	"28.000"	"1.6664431664443E-06"	""	"0"	"9.617E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APSDLYQIILK"	"[K].aPSDLYQIILk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"860.02533"	"1719.04338"	"1719.04568"	"-1.34"	"-0.00115"	"16/90"	"16"	"90"	"2177425.45672607"	"HCD"	"MS2"	"3.746819"	"142.7"	"100.000"	"71.2046"	"23518"	"23518"	"23498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.7"	""	"188.5"	""	"203.2"	""	"214.5"	""	"253.2"	"271.3"	""	"561"	"28"	"34.000"	"27.000"	"0.0404513356102726"	"17"	"0"	"6.028E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVVTGIEMFHK"	"[R].tVVTGIEMFHk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"573.99976"	"1719.98471"	"1719.98678"	"-1.20"	"-0.00069"	"15/92"	"15"	"92"	"5955152.73883057"	"HCD"	"MS2"	"6.451847"	"239.5"	"100.000"	"48.0298"	"14041"	"14041"	"14022"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"297.2"	""	"368.7"	""	"343.8"	""	"350.1"	""	"455.1"	"457.4"	""	"995"	"37"	"36.000"	"29.000"	"0.00952342322697991"	"22"	"0"	"1.949E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVPQNLMFGK"	"[R].lDVPQNLMFGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"574.00006"	"1719.98563"	"1719.98678"	"-0.67"	"-0.00038"	"12/92"	"12"	"92"	"5314046.73516846"	"HCD"	"MS2"	"11.87572"	"140.6"	"100.000"	"66.2793"	"21517"	"21517"	"21491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.4"	""	"200.2"	""	"181.8"	""	"169.4"	""	"269.1"	"305.2"	""	"972"	"39"	"36.000"	"29.000"	"0.00555438870707829"	"22"	"0"	"3.845E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVPQNLMFGK"	"[R].lDVPQNLMFGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"860.49652"	"1719.98577"	"1719.98678"	"-0.59"	"-0.00051"	"10/92"	"10"	"92"	"2098446.87609863"	"HCD"	"MS2"	"0"	"145.6"	"100.000"	"66.2999"	"21525"	"21525"	"21507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"217.9"	""	"197.9"	""	"212.0"	""	"162.2"	""	"283.5"	"310.0"	""	"971"	"34"	"36.000"	"29.000"	"0.017385582021333"	"21"	"0"	"3.856E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVPQNLMFGK"	"[R].lDVPQNLMFGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"574.00049"	"1719.98691"	"1719.98678"	"0.07"	"0.00004"	"12/92"	"12"	"92"	"4095025.39459229"	"HCD"	"MS2"	"21.7452"	"117.9"	"100.000"	"66.3446"	"21491"	"21491"	"21465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.8"	""	"161.4"	""	"166.4"	""	"141.9"	""	"218.0"	"260.0"	""	"991"	"43"	"36.000"	"29.000"	"0.00224410750842244"	"21"	"0"	"3.253E-05"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVPQNLMFGK"	"[R].lDVPQNLMFGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"860.49854"	"1719.98979"	"1719.98678"	"1.75"	"0.00150"	"10/92"	"10"	"92"	"1188296.32073975"	"HCD"	"MS2"	"0"	"91.8"	"100.000"	"66.3168"	"21480"	"21480"	"21449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.4"	""	"136.4"	""	"139.3"	""	"110.3"	""	"169.7"	"190.5"	""	"940"	"38"	"36.000"	"29.000"	"0.00721269981915668"	"17"	"0"	"2.69E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEIPFNSTNK"	"[K].iVEIPFNSTNk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"860.50262"	"1719.99797"	"1720.00454"	"-3.82"	"-0.00328"	"10/100"	"10"	"100"	"1717150.2635498"	"HCD"	"MS2"	"27.36762"	"128.2"	"100.000"	"55.1460"	"16921"	"16921"	"16891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.1"	""	"162.4"	""	"176.7"	""	"218.1"	"0.5"	"241.9"	"241.6"	""	"877"	"41"	"36.000"	"29.000"	"0.0038723053633354"	"26"	"0"	"0.000122"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITGASLADIMAK"	"[R].aITGASLADIMAk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"574.00635"	"1720.00449"	"1720.00791"	"-1.99"	"-0.00114"	"12/108"	"12"	"108"	"1406209.58508301"	"HCD"	"MS2"	"26.69369"	"55.8"	"100.000"	"64.1305"	"20640"	"20640"	"20611"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.2"	""	"78.0"	""	"89.0"	""	"94.1"	""	"87.1"	"102.6"	""	"790"	"27"	"35.000"	"28.000"	"0.0878207406807303"	"20"	"0"	"8.475E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEIPFNSTNK"	"[K].iVEIPFNSTNk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"860.50635"	"1720.00542"	"1720.00454"	"0.51"	"0.00044"	"10/100"	"10"	"100"	"2026665.60687256"	"HCD"	"MS2"	"0"	"140.6"	"100.000"	"55.4140"	"17084"	"17084"	"17061"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.1"	""	"185.9"	""	"186.9"	""	"224.8"	"0.6"	"279.1"	"275.1"	""	"776"	"61"	"35.000"	"28.000"	"3.44216532670728E-05"	"28"	"0"	"0.0001068"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPVNSDVGVLK"	"[K].sFPVNSDVGVLk.[W]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"860.50641"	"1720.00554"	"1720.00454"	"0.58"	"0.00050"	"18/114"	"18"	"114"	"1338966.73187256"	"HCD"	"MS2"	"0"	"110.5"	"100.000"	"51.7872"	"15619"	"15619"	"15590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.8"	""	"139.3"	""	"152.3"	""	"185.8"	""	"219.9"	"205.2"	""	"776"	"38"	"35.000"	"28.000"	"0.00603714665062769"	"21"	"0"	"2.106E-05"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITGASLADIMAK"	"[R].aITGASLADIMAk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"574.00696"	"1720.00632"	"1720.00791"	"-0.93"	"-0.00053"	"10/108"	"10"	"108"	"7572610.77807617"	"HCD"	"MS2"	"6.49066"	"196.6"	"100.000"	"63.7597"	"20488"	"20488"	"20467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"368.2"	""	"392.5"	""	"331.2"	""	"232.6"	"1.0"	"279.1"	"248.6"	""	"758"	"69"	"35.000"	"28.000"	"5.18369224900827E-06"	"20"	"0"	"6.899E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITGASLADIMAK"	"[R].aITGASLADIMAk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.00714"	"1720.00687"	"1720.00791"	"-0.61"	"-0.00035"	"9/108"	"9"	"108"	"1441082.63922119"	"HCD"	"MS2"	"5.846181"	"59.2"	"100.000"	"64.0285"	"20545"	"20545"	"20521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.9"	""	"90.4"	""	"83.0"	""	"88.2"	""	"93.5"	"116.0"	""	"783"	"27"	"35.000"	"28.000"	"0.0756365596112125"	"15"	"0"	"7.584E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITGASLADIMAK"	"[R].aITGASLADIMAk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"860.50708"	"1720.00688"	"1720.00791"	"-0.60"	"-0.00051"	"11/108"	"11"	"108"	"2236475.73425293"	"HCD"	"MS2"	"23.02971"	"168.3"	"100.000"	"63.7642"	"20490"	"20490"	"20467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"408.3"	""	"342.9"	""	"282.2"	""	"174.2"	"0.2"	"182.7"	"191.2"	""	"783"	"93"	"35.000"	"28.000"	"2.1514525211526E-08"	"24"	"0"	"6.873E-07"	"1.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPVNSDVGVLK"	"[K].sFPVNSDVGVLk.[W]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"860.50757"	"1720.00786"	"1720.00454"	"1.93"	"0.00166"	"19/114"	"19"	"114"	"1228565.66833496"	"HCD"	"MS2"	"0"	"101.8"	"100.000"	"51.5508"	"15472"	"15472"	"15442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.9"	""	"124.1"	"2.8"	"144.6"	""	"175.7"	""	"194.6"	"197.2"	""	"775"	"42"	"35.000"	"28.000"	"0.00250191013750929"	"20"	"0"	"1.238E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITGASLADIMAK"	"[R].aITGASLADIMAk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"574.00769"	"1720.00852"	"1720.00791"	"0.35"	"0.00020"	"10/108"	"10"	"108"	"6891798.72784424"	"HCD"	"MS2"	"6.024486"	"175.4"	"100.000"	"63.7130"	"20416"	"20416"	"20393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.0"	""	"321.1"	""	"293.6"	""	"211.6"	"2.1"	"244.3"	"236.3"	""	"772"	"65"	"35.000"	"28.000"	"1.1956038494976E-05"	"20"	"0"	"3.95E-06"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPVNSDVGVLK"	"[K].sFPVNSDVGVLk.[W]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"574.00781"	"1720.00888"	"1720.00454"	"2.52"	"0.00145"	"13/114"	"13"	"114"	"5886175.50115967"	"HCD"	"MS2"	"31.19817"	"185.8"	"100.000"	"51.7414"	"15600"	"15600"	"15574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.2"	""	"246.5"	""	"250.1"	""	"309.6"	"4.5"	"350.4"	"349.9"	""	"762"	"43"	"35.000"	"28.000"	"0.00190952336011991"	"17"	"0"	"1.47E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPVNSDVGVLK"	"[K].sFPVNSDVGVLk.[W]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.00787"	"1720.00907"	"1720.00454"	"2.63"	"0.00151"	"11/114"	"11"	"114"	"5440849.50646973"	"HCD"	"MS2"	"74.40958"	"213.9"	"100.000"	"51.5462"	"15470"	"15470"	"15442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"317.3"	""	"274.7"	""	"286.4"	""	"351.9"	""	"398.3"	"399.7"	""	"762"	"27"	"35.000"	"28.000"	"0.0774328021166701"	"14"	"0"	"0.0001017"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.32495"	"1720.96030"	"1720.96239"	"-1.22"	"-0.00070"	"6/102"	"6"	"102"	"198761.596984863"	"HCD"	"MS2"	"25.22146"	"3.4"	"100.000"	"88.9770"	"30699"	"30699"	"30688"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.4"	""	"6.1"	""	"7.4"	""	"8.0"	""	"2.1"	"3.8"	""	"1094"	"11"	"37.000"	"30.000"	"4.68799701341012"	"13"	"0.001966"	"0.02998"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"574.32501"	"1720.96048"	"1720.96239"	"-1.11"	"-0.00064"	"15/102"	"15"	"102"	"3418938.40209961"	"HCD"	"MS2"	"4.208434"	"22.6"	"100.000"	"88.1535"	"30387"	"30387"	"30381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.4"	""	"31.4"	""	"28.9"	""	"44.0"	""	"39.1"	"42.8"	""	"1104"	"40"	"37.000"	"30.000"	"0.00538194280019997"	"27"	"0"	"2.015E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"574.32507"	"1720.96067"	"1720.96239"	"-1.00"	"-0.00058"	"14/102"	"14"	"102"	"3078387.94458008"	"HCD"	"MS2"	"4.800863"	"19.6"	"100.000"	"88.0296"	"30294"	"30294"	"30277"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.0"	""	"23.5"	""	"28.6"	""	"33.3"	""	"29.8"	"41.2"	""	"1103"	"37"	"37.000"	"30.000"	"0.00987519128500464"	"25"	"0"	"3.791E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"574.32513"	"1720.96085"	"1720.96239"	"-0.90"	"-0.00051"	"6/102"	"6"	"102"	"400108.401245117"	"HCD"	"MS2"	"53.8505"	"4.8"	"100.000"	"87.7417"	"30181"	"30181"	"30169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	"5.4"	""	"7.2"	""	"10.5"	""	"10.5"	"7.2"	""	"1103"	"16"	"37.000"	"30.000"	"1.55433818659234"	"15"	"0.001158"	"0.01534"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"574.32520"	"1720.96103"	"1720.96239"	"-0.79"	"-0.00045"	"14/102"	"14"	"102"	"1569975.03051758"	"HCD"	"MS2"	"4.561172"	"12.7"	"100.000"	"88.5672"	"30503"	"30503"	"30493"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.5"	""	"20.7"	""	"16.9"	""	"23.9"	""	"20.5"	"23.8"	""	"1103"	"41"	"37.000"	"30.000"	"0.00478129474480656"	"25"	"0"	"0.000157"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"574.32526"	"1720.96122"	"1720.96239"	"-0.68"	"-0.00039"	"13/102"	"13"	"102"	"1130435.16491699"	"HCD"	"MS2"	"4.463133"	"8.7"	"100.000"	"88.7051"	"30599"	"30599"	"30585"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.2"	""	"13.1"	""	"15.2"	""	"12.8"	""	"12.3"	"16.5"	""	"1099"	"32"	"37.000"	"30.000"	"0.0340382870754691"	"19"	"0.0001889"	"0.0007369"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"860.98444"	"1720.96160"	"1720.96239"	"-0.46"	"-0.00040"	"10/102"	"10"	"102"	"616120.761535645"	"HCD"	"MS2"	"40.18229"	"19.1"	"100.000"	"87.9142"	"30297"	"30297"	"30284"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.5"	""	"29.3"	""	"24.8"	""	"35.6"	""	"30.8"	"33.8"	""	"1090"	"27"	"37.000"	"30.000"	"0.113866639131545"	"14"	"0.0001889"	"0.0007546"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"860.98450"	"1720.96172"	"1720.96239"	"-0.39"	"-0.00034"	"12/102"	"12"	"102"	"1160963.51593018"	"HCD"	"MS2"	"13.73286"	"50.9"	"100.000"	"88.7139"	"30601"	"30601"	"30598"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.2"	""	"67.7"	""	"78.7"	""	"86.9"	""	"86.0"	"102.0"	""	"1090"	"46"	"37.000"	"30.000"	"0.00138483012452437"	"24"	"0"	"9.978E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"860.98456"	"1720.96184"	"1720.96239"	"-0.32"	"-0.00028"	"4/102"	"4"	"102"	"110997.796203613"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"88.9932"	"30704"	"30704"	"30698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.0"	""	"8.2"	""	"10.0"	""	"12.9"	""	"6.4"	"8.6"	""	"1090"	"12"	"37.000"	"30.000"	"3.72731847768379"	"14"	"0.001286"	"0.01881"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"860.98474"	"1720.96221"	"1720.96239"	"-0.11"	"-0.00009"	"12/102"	"12"	"102"	"1225519.37664795"	"HCD"	"MS2"	"15.76171"	"53.6"	"100.000"	"88.6068"	"30519"	"30519"	"30510"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.0"	""	"72.4"	""	"88.5"	""	"88.8"	"0.5"	"87.3"	"98.0"	""	"1096"	"43"	"37.000"	"30.000"	"0.00272132592154784"	"30"	"0"	"1.339E-05"	"1.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"860.98474"	"1720.96221"	"1720.96239"	"-0.11"	"-0.00009"	"12/102"	"12"	"102"	"3554524.4331665"	"HCD"	"MS2"	"0"	"137.3"	"100.000"	"88.1790"	"30397"	"30397"	"30386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.2"	""	"203.5"	""	"200.2"	""	"249.6"	"3.7"	"210.1"	"239.6"	""	"1096"	"53"	"37.000"	"30.000"	"0.000262289290592806"	"26"	"0"	"2.075E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"574.32562"	"1720.96231"	"1720.96239"	"-0.05"	"-0.00003"	"14/102"	"14"	"102"	"4656024.37908936"	"HCD"	"MS2"	"3.02563"	"25.3"	"100.000"	"88.4181"	"30486"	"30486"	"30478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.2"	""	"37.3"	""	"38.0"	""	"41.2"	""	"42.9"	"46.4"	""	"1091"	"38"	"37.000"	"30.000"	"0.00821854154604867"	"25"	"0"	"2.09E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"574.32562"	"1720.96231"	"1720.96239"	"-0.05"	"-0.00003"	"15/102"	"15"	"102"	"4844515.32421875"	"HCD"	"MS2"	"2.655794"	"30.4"	"100.000"	"88.2967"	"30397"	"30397"	"30390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.5"	""	"38.5"	""	"48.0"	""	"56.7"	""	"50.7"	"56.0"	""	"1091"	"38"	"37.000"	"30.000"	"0.00882662660534292"	"23"	"0"	"2.303E-05"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"860.98480"	"1720.96233"	"1720.96239"	"-0.04"	"-0.00003"	"9/102"	"9"	"102"	"675080.679199219"	"HCD"	"MS2"	"38.69438"	"19.7"	"100.000"	"87.8070"	"30207"	"30207"	"30197"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.5"	""	"32.2"	""	"25.5"	""	"36.8"	""	"28.6"	"32.5"	""	"1091"	"15"	"37.000"	"30.000"	"1.86549785891228"	"18"	"0.0002277"	"0.001162"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"860.98486"	"1720.96245"	"1720.96239"	"0.03"	"0.00003"	"12/102"	"12"	"102"	"4477745.27416992"	"HCD"	"MS2"	"0"	"158.3"	"100.000"	"88.4344"	"30492"	"30492"	"30485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.3"	""	"230.2"	""	"232.7"	""	"266.0"	"5.6"	"248.3"	"277.2"	""	"1091"	"48"	"37.000"	"30.000"	"0.000907391600776927"	"23"	"0"	"2.64E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"860.98492"	"1720.96257"	"1720.96239"	"0.10"	"0.00009"	"12/102"	"12"	"102"	"4868297.75280762"	"HCD"	"MS2"	"0.1582935"	"183.5"	"100.000"	"88.3431"	"30415"	"30415"	"30409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.4"	""	"249.5"	""	"279.2"	""	"333.6"	"3.1"	"284.8"	"336.2"	""	"1091"	"51"	"37.000"	"30.000"	"0.000421497259169705"	"23"	"0"	"2.768E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.32587"	"1720.96305"	"1720.96239"	"0.38"	"0.00022"	"12/102"	"12"	"102"	"439737.754211426"	"HCD"	"MS2"	"31.45116"	"5.3"	"100.000"	"87.8886"	"30287"	"30287"	"30274"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.9"	""	"9.7"	""	"10.1"	""	"7.8"	""	"9.2"	"8.6"	""	"1092"	"27"	"37.000"	"30.000"	"0.116196391910656"	"14"	"0.0001889"	"0.0005273"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"860.98541"	"1720.96355"	"1720.96239"	"0.67"	"0.00058"	"8/102"	"8"	"102"	"117564.705322266"	"HCD"	"MS2"	"8.963622"	"5.7"	"100.000"	"88.8697"	"30615"	"30615"	"30610"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"8.2"	""	"10.3"	""	"8.9"	""	"8.2"	"11.5"	""	"1076"	"12"	"37.000"	"30.000"	"3.76514993849223"	"13"	"0.00103"	"0.01196"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPDFPIPGVLFR"	"[R].sFPDFPIPGVLFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"860.98547"	"1720.96367"	"1720.96239"	"0.74"	"0.00064"	"12/102"	"12"	"102"	"3985765.74914551"	"HCD"	"MS2"	"0"	"142.9"	"100.000"	"88.0853"	"30316"	"30316"	"30301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.9"	""	"218.4"	""	"216.7"	""	"264.9"	"0.6"	"217.1"	"243.5"	""	"1069"	"46"	"37.000"	"30.000"	"0.00119935488826189"	"22"	"0"	"2.114E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IELLGSYDPQK"	"[K].iELLGSYDPQk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"860.99670"	"1720.98613"	"1720.98856"	"-1.41"	"-0.00121"	"15/94"	"15"	"94"	"1621579.40252686"	"HCD"	"MS2"	"13.72626"	"122.3"	"100.000"	"57.0500"	"17699"	"17699"	"17675"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.5"	""	"177.8"	""	"189.3"	""	"177.2"	"7.8"	"192.4"	"207.9"	""	"1014"	"36"	"37.000"	"30.000"	"0.0115613343050421"	"18"	"0"	"3.154E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IELLGSYDPQK"	"[K].iELLGSYDPQk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"574.33380"	"1720.98685"	"1720.98856"	"-0.99"	"-0.00057"	"7/94"	"7"	"94"	"6045407.38092041"	"HCD"	"MS2"	"36.94201"	"171.7"	"100.000"	"57.3298"	"17867"	"17867"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.1"	""	"219.2"	""	"238.2"	""	"270.7"	"2.3"	"309.0"	"317.2"	""	"1011"	"9"	"37.000"	"30.000"	"5.76396267612171"	"17"	"0.0003839"	"0.001946"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVNTKPEK"	"[K].sMVNTkPEk.[A]"	"N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"574.34583"	"1721.02292"	"1721.02345"	"-0.31"	"-0.00018"	"5/88"	"5"	"88"	"13157060.1282349"	"HCD"	"MS2"	"32.01964"	"675.9"	"100.000"	"29.6385"	"6584"	"6584"	"6560"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"968.8"	""	"849.2"	""	"850.7"	""	"1011.0"	""	"1313.1"	"1430.0"	""	"746"	"1"	"35.000"	"28.000"	"32.3376779657815"	"13"	"0.00103"	"0.01286"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPITPLQFYK"	"[K].vGPITPLQFYk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"574.35077"	"1721.03775"	"1721.04020"	"-1.42"	"-0.00082"	"11/86"	"11"	"86"	"1716657.30163574"	"HCD"	"MS2"	"9.338384"	"61.2"	"100.000"	"65.2554"	"21099"	"21099"	"21075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.4"	""	"75.0"	""	"88.6"	""	"105.8"	""	"109.1"	"124.7"	""	"604"	"24"	"34.000"	"27.000"	"0.117762479976316"	"16"	"0.0001889"	"0.0008381"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPITPLQFYK"	"[K].vGPITPLQFYk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.9483"	"0.0000"	"1"	"1"	"1"	"861.02277"	"1721.03826"	"1721.04020"	"-1.13"	"-0.00097"	"9/86"	"9"	"86"	"2617940.12121582"	"HCD"	"MS2"	"11.39604"	"182.8"	"100.000"	"64.8727"	"20943"	"20943"	"20915"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"323.4"	""	"270.5"	""	"284.5"	""	"270.5"	"0.2"	"283.6"	"293.8"	""	"622"	"58"	"34.000"	"27.000"	"4.79468840867313E-05"	"19"	"0"	"7.694E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPITPLQFYK"	"[K].vGPITPLQFYk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"861.02295"	"1721.03862"	"1721.04020"	"-0.92"	"-0.00079"	"8/86"	"8"	"86"	"2853424.75476074"	"HCD"	"MS2"	"27.41962"	"187.8"	"100.000"	"65.1587"	"21060"	"21060"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.6"	""	"274.1"	""	"282.0"	""	"264.1"	""	"310.9"	"323.8"	""	"623"	"41"	"34.000"	"27.000"	"0.0022566180156336"	"22"	"0"	"6.374E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPITPLQFYK"	"[K].vGPITPLQFYk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"574.35120"	"1721.03904"	"1721.04020"	"-0.68"	"-0.00039"	"13/86"	"13"	"86"	"6178430.9979248"	"HCD"	"MS2"	"3.815174"	"168.4"	"100.000"	"64.8958"	"20952"	"20952"	"20931"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"264.2"	""	"240.8"	""	"260.0"	""	"261.4"	"3.5"	"272.7"	"290.2"	""	"602"	"46"	"34.000"	"27.000"	"0.000770134351958598"	"22"	"0"	"5.706E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPITPLQFYK"	"[K].vGPITPLQFYk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"574.35144"	"1721.03977"	"1721.04020"	"-0.25"	"-0.00014"	"9/86"	"9"	"86"	"1246594.55908203"	"HCD"	"MS2"	"20.85074"	"48.9"	"100.000"	"65.3302"	"21077"	"21077"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.9"	""	"54.8"	""	"68.1"	""	"88.1"	"0.0"	"101.4"	"93.0"	""	"581"	"15"	"34.000"	"27.000"	"0.970836591275863"	"18"	"0.0001889"	"0.0009313"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPITPLQFYK"	"[K].vGPITPLQFYk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.9636"	"0.0000"	"1"	"1"	"1"	"861.02362"	"1721.03996"	"1721.04020"	"-0.14"	"-0.00012"	"10/86"	"10"	"86"	"2030472.17614746"	"HCD"	"MS2"	"0"	"149.9"	"100.000"	"64.8857"	"20895"	"20895"	"20873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"273.7"	""	"224.5"	""	"239.2"	""	"224.9"	"1.9"	"229.3"	"221.9"	""	"581"	"55"	"34.000"	"27.000"	"8.69252876934679E-05"	"18"	"0"	"0.0001216"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPITPLQFYK"	"[K].vGPITPLQFYk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"861.02393"	"1721.04057"	"1721.04020"	"0.22"	"0.00019"	"8/86"	"8"	"86"	"3242565.06488037"	"HCD"	"MS2"	"26.11863"	"204.5"	"100.000"	"65.1897"	"21019"	"21019"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"345.4"	""	"310.8"	""	"310.5"	""	"277.0"	""	"348.5"	"342.3"	""	"573"	"39"	"34.000"	"27.000"	"0.00369934321890278"	"22"	"0.0001889"	"0.0005466"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPITPLQFYK"	"[K].vGPITPLQFYk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"574.35187"	"1721.04105"	"1721.04020"	"0.49"	"0.00028"	"12/86"	"12"	"86"	"5398040.93206787"	"HCD"	"MS2"	"1.883247"	"157.0"	"100.000"	"64.9295"	"20913"	"20913"	"20889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.7"	""	"231.7"	""	"242.6"	""	"235.7"	"0.8"	"250.7"	"262.5"	""	"574"	"35"	"34.000"	"27.000"	"0.00972482728119512"	"16"	"0"	"6.834E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLPEVTLGILPGAR"	"[R].vGLPEVTLGILPGAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.35541"	"1721.05167"	"1721.05227"	"-0.35"	"-0.00020"	"12/116"	"12"	"116"	"978452.795654297"	"HCD"	"MS2"	"26.59956"	"25.5"	"100.000"	"74.3449"	"24749"	"24749"	"24721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.5"	""	"31.1"	""	"32.2"	""	"36.4"	"2.0"	"53.0"	"51.0"	""	"461"	"27"	"33.000"	"26.000"	"0.0459907963600327"	"14"	"0.0001889"	"0.0004724"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLPEVTLGILPGAR"	"[R].vGLPEVTLGILPGAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.35541"	"1721.05167"	"1721.05227"	"-0.35"	"-0.00020"	"14/116"	"14"	"116"	"1060594.47247314"	"HCD"	"MS2"	"34.32869"	"27.6"	"100.000"	"74.3375"	"24798"	"24798"	"24767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.8"	""	"34.6"	""	"36.7"	""	"46.3"	""	"52.7"	"51.9"	""	"461"	"20"	"33.000"	"26.000"	"0.208771364507035"	"14"	"0.0001859"	"0.0003704"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLPEVTLGILPGAR"	"[R].vGLPEVTLGILPGAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"861.03015"	"1721.05303"	"1721.05227"	"0.44"	"0.00038"	"5/116"	"5"	"116"	"184143.659118652"	"HCD"	"MS2"	"20.96756"	"13.7"	"100.000"	"74.4137"	"24829"	"24829"	"24799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.9"	""	"13.4"	""	"19.4"	""	"23.7"	"1.1"	"24.5"	"26.4"	""	"451"	"11"	"33.000"	"26.000"	"1.63736893401627"	"13"	"0.001587"	"0.02126"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLQDLGYTVK"	"[K].lLLQDLGYTVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"861.03290"	"1721.05852"	"1721.06133"	"-1.63"	"-0.00140"	"10/102"	"10"	"102"	"1080672.62518311"	"HCD"	"MS2"	"0"	"87.2"	"100.000"	"70.9506"	"23415"	"23415"	"23386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.5"	""	"121.5"	""	"127.0"	""	"150.6"	"1.5"	"155.2"	"145.2"	""	"419"	"76"	"33.000"	"26.000"	"5.40983509937949E-07"	"26"	"0"	"4.22E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLQDLGYTVK"	"[K].lLLQDLGYTVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"0"	"2"	"2"	"0.9103"	"0.0000"	"1"	"1"	"1"	"861.03375"	"1721.06023"	"1721.06133"	"-0.64"	"-0.00055"	"10/102"	"10"	"102"	"1070541.72991943"	"HCD"	"MS2"	"10.5022"	"86.5"	"100.000"	"71.0122"	"23388"	"23388"	"23363"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.2"	""	"118.9"	""	"124.4"	""	"137.1"	""	"163.8"	"158.7"	""	"399"	"78"	"32.000"	"26.000"	"3.35693475183559E-07"	"25"	"0"	"3.822E-06"	"1.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDPFGINSGK"	"[R].sLEDPFGINSGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"861.47748"	"1721.94768"	"1721.94742"	"0.15"	"0.00013"	"10/112"	"10"	"112"	"2290446.72277832"	"HCD"	"MS2"	"8.594996"	"186.0"	"100.000"	"55.4036"	"17026"	"17026"	"17003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"179.1"	""	"205.5"	""	"213.0"	""	"350.6"	""	"426.2"	"395.7"	""	"1109"	"68"	"37.000"	"30.000"	"8.56843586724051E-06"	""	"0"	"6.362E-06"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDPFGINSGK"	"[R].sLEDPFGINSGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"861.47766"	"1721.94805"	"1721.94742"	"0.36"	"0.00031"	"11/112"	"11"	"112"	"2327162.67095947"	"HCD"	"MS2"	"22.25341"	"180.4"	"100.000"	"55.5817"	"17153"	"17153"	"17125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.4"	""	"215.7"	""	"197.8"	""	"358.8"	"0.0"	"387.8"	"376.5"	""	"1126"	"80"	"37.000"	"30.000"	"5.51452861785097E-07"	""	"0"	"2.677E-06"	"1.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPNGPYPYTLK"	"[K].nPNGPYPYTLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"861.48492"	"1721.96257"	"1721.96268"	"-0.06"	"-0.00005"	"8/100"	"8"	"100"	"595107.557067871"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"40.8022"	"11103"	"11103"	"11077"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.0"	""	"64.5"	""	"41.9"	""	"81.0"	""	"91.0"	"95.3"	""	"1080"	"56"	"37.000"	"30.000"	"0.000123138471888023"	"17"	"0"	"2.255E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPNFLVDFGK"	"[K].lNPNFLVDFGk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"861.50159"	"1721.99590"	"1721.99906"	"-1.84"	"-0.00158"	"9/98"	"9"	"98"	"1579636.84259033"	"HCD"	"MS2"	"17.89499"	"118.2"	"100.000"	"74.9212"	"25036"	"25036"	"25007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.5"	""	"158.2"	""	"158.3"	""	"195.9"	"0.1"	"239.2"	"231.1"	""	"947"	"59"	"36.000"	"29.000"	"6.52108683521283E-05"	"25"	"0"	"1.313E-05"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPNFLVDFGK"	"[K].lNPNFLVDFGk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"861.50183"	"1721.99639"	"1721.99906"	"-1.55"	"-0.00134"	"9/98"	"9"	"98"	"1810690.06335449"	"HCD"	"MS2"	"14.83192"	"139.6"	"100.000"	"74.9377"	"24991"	"24991"	"24961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.1"	""	"176.4"	""	"190.6"	""	"245.7"	"1.4"	"276.9"	"267.1"	""	"949"	"57"	"36.000"	"29.000"	"9.66576465871364E-05"	"24"	"0"	"1.813E-05"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPNFLVDFGK"	"[K].lNPNFLVDFGk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.67078"	"1721.99778"	"1721.99906"	"-0.75"	"-0.00043"	"15/98"	"15"	"98"	"12319930.249939"	"HCD"	"MS2"	"6.052178"	"291.7"	"100.000"	"75.0483"	"25088"	"25088"	"25071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"335.3"	""	"348.4"	""	"399.8"	""	"523.6"	""	"574.1"	"587.1"	""	"944"	"34"	"36.000"	"29.000"	"0.0201345532874352"	"15"	"0"	"0.0001018"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPNFLVDFGK"	"[K].lNPNFLVDFGk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.67133"	"1721.99942"	"1721.99906"	"0.21"	"0.00012"	"15/98"	"15"	"98"	"12123486.6151123"	"HCD"	"MS2"	"7.371497"	"303.7"	"100.000"	"75.0625"	"25042"	"25042"	"25025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.9"	""	"360.4"	""	"414.3"	""	"537.5"	"1.0"	"613.1"	"607.4"	""	"876"	"35"	"36.000"	"29.000"	"0.0131969663859352"	"15"	"0"	"5.475E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPNFLVDFGK"	"[K].lNPNFLVDFGk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"861.50354"	"1721.99980"	"1721.99906"	"0.43"	"0.00037"	"9/98"	"9"	"98"	"3252567.40136719"	"HCD"	"MS2"	"0.6628441"	"222.1"	"100.000"	"75.2053"	"25152"	"25152"	"25135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"263.9"	""	"249.5"	""	"304.6"	""	"388.2"	""	"433.5"	"470.6"	""	"879"	"63"	"36.000"	"29.000"	"2.02749074019286E-05"	"24"	"0"	"7.977E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNPNFLVDFGK"	"[K].lNPNFLVDFGk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"861.50378"	"1722.00029"	"1721.99906"	"0.71"	"0.00061"	"9/98"	"9"	"98"	"2788284.30065918"	"HCD"	"MS2"	"0.5885507"	"205.3"	"100.000"	"75.2240"	"25107"	"25107"	"25089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.3"	""	"237.6"	""	"276.7"	""	"354.2"	""	"392.5"	"443.9"	""	"871"	"57"	"36.000"	"29.000"	"8.43311765298747E-05"	"23"	"0"	"1.682E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].QLGSGLLLVTGPLALNR.[V]"	""	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"861.51617"	"1722.02507"	"1722.02723"	"-1.25"	"-0.00108"	"6/172"	"6"	"172"	"202788.940185547"	"HCD"	"MS2"	"0"	""	"100.000"	"97.9505"	"33601"	"33601"	"33597"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	""	""	""	""	"NoQuanLabels"	"701"	"27"	"35.000"	"28.000"	"0.063050425575264"	"24"	"0.00175"	"0.0239"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].QLGSGLLLVTGPLALNR.[V]"	""	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"861.51666"	"1722.02605"	"1722.02723"	"-0.69"	"-0.00059"	"10/172"	"10"	"172"	"289258.717895508"	"HCD"	"MS2"	"0"	""	"100.000"	"98.2017"	"33664"	"33664"	"33662"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	""	""	""	""	"NoQuanLabels"	"684"	"36"	"35.000"	"28.000"	"0.00826087605380168"	"27"	"0.0008125"	"0.007536"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].QLGSGLLLVTGPLALNR.[V]"	""	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"861.51727"	"1722.02727"	"1722.02723"	"0.02"	"0.00002"	"7/172"	"7"	"172"	"352418.867553711"	"HCD"	"MS2"	"0"	""	"100.000"	"98.0460"	"33623"	"33623"	"33619"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	""	""	""	""	"NoQuanLabels"	"688"	"47"	"35.000"	"28.000"	"0.000634685304197738"	""	"0.00119"	"0.01553"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].QLGSGLLLVTGPLALNR.[V]"	""	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"861.51758"	"1722.02788"	"1722.02723"	"0.38"	"0.00032"	"6/172"	"6"	"172"	"185840.765014648"	"HCD"	"MS2"	"0"	""	"100.000"	"97.7901"	"33553"	"33553"	"33550"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	""	""	""	""	"NoQuanLabels"	"674"	"31"	"35.000"	"28.000"	"0.0266458697635941"	"27"	"0.0008125"	"0.007504"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKPSYLIDK"	"[K].akPSYLIDk.[N]"	"N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.69653"	"1722.07505"	"1722.07687"	"-1.06"	"-0.00061"	"9/86"	"9"	"86"	"10069421.0262451"	"HCD"	"MS2"	"18.69654"	"332.1"	"53.976"	"37.2395"	"9644"	"9644"	"9624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"485.7"	""	"431.0"	""	"463.8"	""	"504.9"	""	"627.9"	"634.4"	""	"326"	"9"	"32.000"	"25.000"	"2.03792221925488"	"13"	"0.0001889"	"0.0005249"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPIIKPQGR"	"[K].eLLPIIkPQGR.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.70575"	"1722.10270"	"1722.10420"	"-0.87"	"-0.00050"	"6/88"	"6"	"88"	"4763116.93804932"	"HCD"	"MS2"	"29.08133"	"225.1"	"100.000"	"46.3673"	"13409"	"13409"	"13388"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"345.4"	""	"302.7"	""	"314.5"	""	"360.4"	"7.9"	"380.6"	"420.0"	""	"163"	"17"	"29.000"	"22.000"	"0.152812052407495"	"14"	"0"	"4.705E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPIIKPQGR"	"[K].eLLPIIkPQGR.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.70599"	"1722.10343"	"1722.10420"	"-0.45"	"-0.00026"	"6/88"	"6"	"88"	"4644029.45556641"	"HCD"	"MS2"	"0"	"208.2"	"100.000"	"46.1057"	"13254"	"13254"	"13229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.0"	""	"270.5"	""	"302.3"	""	"327.4"	""	"369.4"	"378.2"	""	"163"	"20"	"29.000"	"22.000"	"0.0912341875025728"	"14"	"0"	"0.0001072"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPIIKPQGR"	"[K].eLLPIIkPQGR.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.70599"	"1722.10343"	"1722.10420"	"-0.45"	"-0.00026"	"9/88"	"9"	"88"	"5571419.45843506"	"HCD"	"MS2"	"26.52358"	"255.4"	"100.000"	"46.4058"	"13377"	"13377"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"362.2"	""	"343.5"	""	"363.5"	""	"387.8"	"1.3"	"468.8"	"492.6"	""	"163"	"11"	"29.000"	"22.000"	"0.638495158854463"	"13"	"0.0001889"	"0.0004031"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLPIIKPQGR"	"[K].eLLPIIkPQGR.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"574.70612"	"1722.10379"	"1722.10420"	"-0.23"	"-0.00013"	"6/88"	"6"	"88"	"6363285.25976563"	"HCD"	"MS2"	"30.54122"	"267.0"	"100.000"	"46.7092"	"13549"	"13549"	"13522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.3"	""	"354.5"	""	"386.4"	""	"413.1"	"1.4"	"491.6"	"485.2"	""	"163"	"16"	"29.000"	"22.000"	"0.198224626739516"	"14"	"0"	"0.0001789"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVWDVGGQDK"	"[K].fNVWDVGGQDk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"2"	"2"	"0.8493"	"0.0000"	"1"	"1"	"1"	"861.96503"	"1722.92278"	"1722.92154"	"0.72"	"0.00062"	"20/108"	"20"	"108"	"2514282.68933105"	"HCD"	"MS2"	"9.484458"	"216.0"	"100.000"	"57.3759"	"17886"	"17886"	"17861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"340.2"	""	"295.2"	""	"288.2"	""	"351.4"	""	"389.9"	"381.6"	""	"1086"	"73"	"37.000"	"30.000"	"2.56330231406129E-06"	"28"	"0"	"5.881E-06"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVWDVGGQDK"	"[K].fNVWDVGGQDk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"574.97931"	"1722.92337"	"1722.92154"	"1.06"	"0.00061"	"10/108"	"10"	"108"	"6400391.8894043"	"HCD"	"MS2"	"24.52861"	"189.6"	"100.000"	"57.1654"	"17746"	"17746"	"17723"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"275.0"	""	"279.7"	""	"251.9"	""	"306.4"	""	"357.4"	"327.8"	""	"1097"	"33"	"37.000"	"30.000"	"0.0283254378545731"	"17"	"0"	"0.0001323"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVWDVGGQDK"	"[K].fNVWDVGGQDk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"574.97931"	"1722.92337"	"1722.92154"	"1.06"	"0.00061"	"14/108"	"14"	"108"	"7386609.7555542"	"HCD"	"MS2"	"30.6622"	"207.6"	"100.000"	"57.3690"	"17883"	"17883"	"17861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"324.2"	""	"263.9"	""	"294.8"	""	"338.8"	"1.4"	"383.1"	"359.6"	""	"1097"	"44"	"37.000"	"30.000"	"0.00208054269258064"	"19"	"0"	"6.502E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVWDVGGQDK"	"[K].fNVWDVGGQDk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"2"	"2"	"0.8732"	"0.0000"	"1"	"1"	"1"	"861.96545"	"1722.92363"	"1722.92154"	"1.21"	"0.00105"	"20/108"	"20"	"108"	"2671387.97418213"	"HCD"	"MS2"	"19.72109"	"225.0"	"100.000"	"57.1699"	"17748"	"17748"	"17723"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.4"	""	"270.4"	""	"317.4"	""	"366.5"	""	"408.7"	"397.1"	""	"1101"	"71"	"37.000"	"30.000"	"4.71799333799318E-06"	"26"	"0"	"1.097E-05"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFITNIPFDVK"	"[R].aFITNIPFDVk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"575.01074"	"1723.01767"	"1723.01946"	"-1.04"	"-0.00060"	"11/102"	"11"	"102"	"5919507.17315674"	"HCD"	"MS2"	"11.90481"	"148.6"	"100.000"	"71.3118"	"23510"	"23510"	"23491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.3"	""	"154.1"	""	"167.5"	""	"289.1"	"1.4"	"310.4"	"308.0"	""	"733"	"37"	"35.000"	"28.000"	"0.00688769613358398"	"24"	"0.0001308"	"0.0002197"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFITNIPFDVK"	"[R].aFITNIPFDVk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"862.01263"	"1723.01799"	"1723.01946"	"-0.85"	"-0.00074"	"16/102"	"16"	"102"	"4559290.42736816"	"HCD"	"MS2"	"25.61008"	"259.2"	"100.000"	"71.2411"	"23533"	"23533"	"23514"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"346.5"	""	"291.1"	""	"294.3"	""	"461.8"	"4.9"	"514.9"	"546.9"	""	"732"	"48"	"35.000"	"28.000"	"0.000643400042708881"	"17"	"0"	"1.192E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFITNIPFDVK"	"[R].aFITNIPFDVk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"575.01086"	"1723.01804"	"1723.01946"	"-0.83"	"-0.00047"	"10/102"	"10"	"102"	"6172997.55664063"	"HCD"	"MS2"	"9.819201"	"175.9"	"100.000"	"71.2459"	"23535"	"23535"	"23514"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"206.7"	""	"211.9"	""	"207.9"	""	"338.5"	""	"342.8"	"362.1"	""	"732"	"32"	"35.000"	"28.000"	"0.0225673770681302"	"16"	"0.0001889"	"0.0006873"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFITNIPFDVK"	"[R].aFITNIPFDVk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"862.01294"	"1723.01860"	"1723.01946"	"-0.50"	"-0.00043"	"16/102"	"16"	"102"	"3274181.50982666"	"HCD"	"MS2"	"40.48845"	"184.3"	"100.000"	"71.2726"	"23494"	"23494"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.7"	""	"212.2"	""	"217.8"	""	"324.9"	"0.5"	"370.1"	"372.4"	""	"699"	"48"	"35.000"	"28.000"	"0.000521731646147859"	"20"	"0"	"0.0001062"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFITNIPFDVK"	"[R].aFITNIPFDVk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"862.01300"	"1723.01872"	"1723.01946"	"-0.43"	"-0.00037"	"12/102"	"12"	"102"	"517357.694580078"	"HCD"	"MS2"	"17.97436"	"41.5"	"100.000"	"71.5637"	"23665"	"23665"	"23642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.5"	""	"44.6"	""	"55.1"	""	"71.0"	""	"78.1"	"86.5"	""	"699"	"43"	"35.000"	"28.000"	"0.00183420207357296"	"17"	"0"	"0.0001053"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFITNIPFDVK"	"[R].aFITNIPFDVk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"575.01117"	"1723.01896"	"1723.01946"	"-0.30"	"-0.00017"	"9/102"	"9"	"102"	"1414876.00769043"	"HCD"	"MS2"	"23.88126"	"57.1"	"100.000"	"71.5775"	"23671"	"23671"	"23642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.8"	""	"60.1"	""	"60.4"	""	"123.7"	""	"121.3"	"114.5"	""	"698"	"28"	"35.000"	"28.000"	"0.056470993313743"	"17"	"0.0002277"	"0.001215"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFITNIPFDVK"	"[R].aFITNIPFDVk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"862.01385"	"1723.02043"	"1723.01946"	"0.56"	"0.00048"	"11/102"	"11"	"102"	"961369.91192627"	"HCD"	"MS2"	"20.65841"	"67.7"	"100.000"	"71.5859"	"23622"	"23622"	"23603"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.8"	""	"83.3"	""	"77.0"	""	"113.8"	""	"136.6"	"141.6"	""	"692"	"49"	"35.000"	"28.000"	"0.000425672994701084"	"18"	"0"	"0.0001006"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFPVSENSK"	"[K].kFPVSENSk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.01611"	"1723.03379"	"1723.03573"	"-1.13"	"-0.00065"	"8/86"	"8"	"86"	"4409085.26647949"	"HCD"	"MS2"	"23.61816"	"290.9"	"100.000"	"32.2428"	"7650"	"7650"	"7626"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"495.1"	""	"350.9"	""	"380.9"	""	"462.4"	"0.7"	"556.0"	"509.0"	""	"584"	"30"	"34.000"	"27.000"	"0.0264473919462274"	"14"	"0"	"9.533E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFPVSENSK"	"[K].kFPVSENSk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.01678"	"1723.03580"	"1723.03573"	"0.04"	"0.00002"	"8/86"	"8"	"86"	"5316048.5112915"	"HCD"	"MS2"	"27.71371"	"345.8"	"100.000"	"32.0808"	"7541"	"7541"	"7522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"573.5"	""	"414.4"	""	"446.1"	""	"549.9"	""	"636.1"	"656.5"	""	"565"	"29"	"34.000"	"27.000"	"0.0370696471472925"	"14"	"0"	"0.0001068"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLEFGDPASSVFR"	"[K].lGLEFGDPASSVFR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXQ5"	"2',5'-phosphodiesterase 12 OS=Rattus norvegicus OX=10116 GN=Pde12 PE=2 SV=1"	"Q6AXQ5"	"2',5'-phosphodiesterase 12 OS=Rattus norvegicus OX=10116 GN=Pde12 PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"862.46362"	"1723.91997"	"1723.92165"	"-0.98"	"-0.00084"	"4/118"	"4"	"118"	"344469.403686523"	"HCD"	"MS2"	"42.42463"	"25.1"	"100.000"	"70.0902"	"23064"	"23064"	"23034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.9"	""	"33.7"	""	"34.8"	""	"43.4"	"0.7"	"41.3"	"50.4"	""	"1053"	"11"	"37.000"	"30.000"	"4.13426561622203"	"16"	"0.0002277"	"0.001163"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANNFLWPFK"	"[K].eANNFLWPFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"575.32324"	"1723.95517"	"1723.95720"	"-1.17"	"-0.00067"	"11/86"	"11"	"86"	"3883977.31939697"	"HCD"	"MS2"	"8.622335"	"107.5"	"100.000"	"73.3348"	"24388"	"24388"	"24367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.8"	""	"159.0"	""	"151.8"	""	"185.4"	""	"193.3"	"178.8"	""	"1020"	"39"	"37.000"	"30.000"	"0.00615985055904458"	"16"	"0.0001889"	"0.0008974"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANNFLWPFK"	"[K].eANNFLWPFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"575.32336"	"1723.95554"	"1723.95720"	"-0.96"	"-0.00055"	"12/86"	"12"	"86"	"4239847.42547607"	"HCD"	"MS2"	"58.57118"	"115.4"	"100.000"	"73.3484"	"24342"	"24342"	"24321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.3"	""	"156.3"	""	"171.3"	""	"197.3"	"0.5"	"207.4"	"197.4"	""	"1011"	"32"	"37.000"	"30.000"	"0.0293576413057023"	"18"	"0"	"0.0001522"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANNFLWPFK"	"[K].eANNFLWPFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"862.48169"	"1723.95610"	"1723.95720"	"-0.64"	"-0.00055"	"12/86"	"12"	"86"	"1581716.38623047"	"HCD"	"MS2"	"3.897613"	"118.7"	"100.000"	"73.3276"	"24385"	"24385"	"24367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.8"	""	"172.8"	""	"190.7"	""	"179.5"	""	"207.2"	"199.7"	""	"1020"	"38"	"37.000"	"30.000"	"0.00888321505429722"	"16"	"0.0001859"	"0.0003609"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVNEIFYDLVR"	"[K].iNVNEIFYDLVR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.32361"	"1723.95627"	"1723.95804"	"-1.02"	"-0.00059"	"12/116"	"12"	"116"	"576793.824035645"	"HCD"	"MS2"	"13.35897"	"7.3"	"100.000"	"89.6390"	"30935"	"30935"	"30925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.5"	""	"8.7"	""	"10.4"	""	"17.3"	""	"12.1"	"12.2"	""	"1019"	"46"	"37.000"	"30.000"	"0.00124206461195888"	"16"	"0"	"9.478E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANNFLWPFK"	"[K].eANNFLWPFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"575.32373"	"1723.95664"	"1723.95720"	"-0.32"	"-0.00019"	"11/86"	"11"	"86"	"6774347.55938721"	"HCD"	"MS2"	"18.06944"	"160.2"	"95.794"	"73.6551"	"24467"	"24467"	"24449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.1"	""	"194.3"	""	"220.9"	""	"266.7"	"0.5"	"312.6"	"306.6"	""	"1019"	"24"	"37.000"	"30.000"	"0.187994086471492"	"19"	"0.0001889"	"0.001058"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANNFLWPFK"	"[K].eANNFLWPFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"862.48199"	"1723.95671"	"1723.95720"	"-0.28"	"-0.00024"	"7/86"	"7"	"86"	"3025523.56103516"	"HCD"	"MS2"	"18.06607"	"205.9"	"100.000"	"73.6414"	"24513"	"24513"	"24495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"235.7"	""	"257.6"	""	"268.7"	""	"351.5"	"3.0"	"425.6"	"412.9"	""	"1019"	"28"	"37.000"	"30.000"	"0.0893602115688378"	"21"	"0.0003146"	"0.001409"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANNFLWPFK"	"[K].eANNFLWPFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"575.32379"	"1723.95682"	"1723.95720"	"-0.22"	"-0.00013"	"11/86"	"11"	"86"	"6854138.10375977"	"HCD"	"MS2"	"17.93861"	"160.2"	"100.000"	"73.6436"	"24514"	"24514"	"24495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.0"	""	"208.2"	""	"204.9"	""	"255.5"	"1.3"	"329.1"	"316.2"	""	"1019"	"25"	"37.000"	"30.000"	"0.162234863731946"	"21"	"0.0001889"	"0.0009541"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVNEIFYDLVR"	"[K].iNVNEIFYDLVR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"862.48206"	"1723.95683"	"1723.95804"	"-0.70"	"-0.00060"	"8/116"	"8"	"116"	"265224.465698242"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"90.0712"	"31098"	"31098"	"31090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.6"	""	"17.3"	""	"18.3"	""	"28.3"	""	"22.1"	"32.4"	""	"1019"	"39"	"37.000"	"30.000"	"0.00601373363864557"	"18"	"0"	"0.0001441"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVNEIFYDLVR"	"[K].iNVNEIFYDLVR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.32391"	"1723.95719"	"1723.95804"	"-0.49"	"-0.00028"	"13/116"	"13"	"116"	"584150.293945313"	"HCD"	"MS2"	"20.89198"	"7.5"	"100.000"	"89.5024"	"30844"	"30844"	"30830"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"10.9"	""	"9.2"	""	"16.4"	""	"10.3"	"14.5"	""	"1013"	"48"	"37.000"	"30.000"	"0.000749168398607197"	"16"	"0"	"3.05E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVNEIFYDLVR"	"[K].iNVNEIFYDLVR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"575.32391"	"1723.95719"	"1723.95804"	"-0.49"	"-0.00028"	"13/116"	"13"	"116"	"1580644.55212402"	"HCD"	"MS2"	"2.690145"	"11.0"	"100.000"	"89.7676"	"30948"	"30948"	"30939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.4"	""	"17.8"	""	"13.2"	""	"21.8"	""	"15.8"	"24.3"	""	"1013"	"55"	"37.000"	"30.000"	"0.000160169363487528"	"19"	"0"	"2.898E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVNEIFYDLVR"	"[K].iNVNEIFYDLVR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"575.32397"	"1723.95737"	"1723.95804"	"-0.39"	"-0.00022"	"13/116"	"13"	"116"	"1024725.13226318"	"HCD"	"MS2"	"2.578699"	"8.7"	"100.000"	"89.9035"	"31034"	"31034"	"31027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.8"	""	"12.4"	""	"11.1"	""	"19.7"	""	"16.1"	"13.3"	""	"1020"	"37"	"37.000"	"30.000"	"0.00932331110232798"	"19"	"0"	"4.677E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVNEIFYDLVR"	"[K].iNVNEIFYDLVR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"862.48236"	"1723.95745"	"1723.95804"	"-0.34"	"-0.00030"	"17/116"	"17"	"116"	"1783474.33691406"	"HCD"	"MS2"	"0"	"88.0"	"100.000"	"89.7956"	"30995"	"30995"	"30987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.8"	""	"116.8"	""	"108.1"	""	"157.6"	"0.8"	"164.7"	"179.8"	""	"1020"	"61"	"37.000"	"30.000"	"4.31092211031748E-05"	"24"	"0"	"3.715E-06"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVNEIFYDLVR"	"[K].iNVNEIFYDLVR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"862.48242"	"1723.95757"	"1723.95804"	"-0.27"	"-0.00023"	"5/116"	"5"	"116"	"141488.700256348"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"89.4215"	"30812"	"30812"	"30803"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.0"	""	"15.3"	""	"10.6"	""	"20.5"	""	"20.7"	"18.3"	""	"1020"	"23"	"37.000"	"30.000"	"0.25094016319754"	"14"	"0.000523"	"0.002912"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANNFLWPFK"	"[K].eANNFLWPFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"862.48248"	"1723.95769"	"1723.95720"	"0.28"	"0.00025"	"12/86"	"12"	"86"	"1612986.32501221"	"HCD"	"MS2"	"10.89072"	"120.3"	"100.000"	"73.3507"	"24343"	"24343"	"24321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.6"	""	"163.6"	"2.3"	"169.6"	""	"196.2"	"3.2"	"222.8"	"210.6"	""	"1020"	"36"	"37.000"	"30.000"	"0.0121778375428572"	"16"	"0.0001889"	"0.0006383"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANNFLWPFK"	"[K].eANNFLWPFk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"862.48248"	"1723.95769"	"1723.95720"	"0.28"	"0.00025"	"7/86"	"7"	"86"	"2931061.53070068"	"HCD"	"MS2"	"16.06738"	"216.9"	"100.000"	"73.6507"	"24466"	"24466"	"24449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"275.9"	""	"267.5"	""	"282.3"	""	"369.6"	"1.5"	"436.0"	"425.6"	""	"1020"	"29"	"37.000"	"30.000"	"0.0703995974947471"	"21"	"0.0003839"	"0.0019"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVNEIFYDLVR"	"[K].iNVNEIFYDLVR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"862.48254"	"1723.95781"	"1723.95804"	"-0.13"	"-0.00011"	"10/116"	"10"	"116"	"2340709.86120605"	"HCD"	"MS2"	"0"	"111.5"	"100.000"	"89.7119"	"30926"	"30926"	"30915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"126.0"	""	"140.6"	""	"137.0"	""	"210.4"	"5.3"	"217.3"	"222.0"	""	"1019"	"57"	"37.000"	"30.000"	"0.000105231118938547"	"24"	"0"	"2.723E-06"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVNEIFYDLVR"	"[K].iNVNEIFYDLVR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2;Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"862.48309"	"1723.95891"	"1723.95804"	"0.51"	"0.00044"	"8/116"	"8"	"116"	"248327.339294434"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"89.9886"	"31034"	"31034"	"31025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.5"	""	"17.4"	""	"17.4"	""	"28.5"	""	"30.0"	"24.6"	""	"1006"	"38"	"37.000"	"30.000"	"0.00856185729722661"	"18"	"7.476E-05"	"0.0002023"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEFSIIHYAGK"	"[K].tEFSIIHYAGk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"575.32990"	"1723.97513"	"1723.97833"	"-1.85"	"-0.00107"	"8/86"	"8"	"86"	"4139189.60351563"	"HCD"	"MS2"	"30.58665"	"205.7"	"100.000"	"45.1931"	"12934"	"12934"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"240.1"	""	"249.9"	""	"252.7"	""	"362.6"	"3.6"	"448.6"	"396.7"	""	"1005"	"19"	"37.000"	"30.000"	"0.586321832573134"	"15"	"0.0001889"	"0.0006088"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMYNSSNPVLK"	"[R].lMYNSSNPVLk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.9296"	"0.0000"	"1"	"1"	"1"	"862.49512"	"1723.98296"	"1723.98170"	"0.73"	"0.00063"	"9/96"	"9"	"96"	"1189964.91650391"	"HCD"	"MS2"	"17.91403"	"101.3"	"100.000"	"47.1818"	"13694"	"13694"	"13672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.8"	""	"172.6"	""	"168.1"	""	"89.8"	"0.7"	"178.8"	"203.1"	""	"961"	"71"	"36.000"	"29.000"	"3.70419116885459E-06"	"22"	"0"	"3.639E-06"	"1.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMYNSSNPVLK"	"[R].lMYNSSNPVLk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"862.49518"	"1723.98308"	"1723.98170"	"0.80"	"0.00069"	"10/96"	"10"	"96"	"1122557.56500244"	"HCD"	"MS2"	"16.4757"	"96.9"	"100.000"	"47.4545"	"13854"	"13854"	"13826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.6"	""	"170.1"	""	"149.2"	""	"95.9"	""	"176.0"	"197.8"	""	"960"	"70"	"36.000"	"29.000"	"5.08441788085098E-06"	"21"	"0"	"3.947E-06"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSFAIPLIEK"	"[K].tFSFAIPLIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"575.35083"	"1724.03794"	"1724.03987"	"-1.12"	"-0.00064"	"11/98"	"11"	"98"	"962140.982299805"	"HCD"	"MS2"	"22.80473"	"31.0"	"100.000"	"80.7477"	"27350"	"27350"	"27328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.8"	""	"39.0"	""	"42.7"	""	"51.3"	""	"53.9"	"66.2"	""	"557"	"28"	"34.000"	"27.000"	"0.0462194953721361"	"24"	"0.0001889"	"0.0007538"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSFAIPLIEK"	"[K].tFSFAIPLIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"0"	"3"	"3"	"0.5312"	"0.0000"	"1"	"1"	"1"	"575.35101"	"1724.03849"	"1724.03987"	"-0.80"	"-0.00046"	"9/98"	"9"	"98"	"836287.90045166"	"HCD"	"MS2"	"29.76514"	"27.2"	"100.000"	"80.7794"	"27414"	"27414"	"27390"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.2"	""	"34.4"	""	"40.5"	""	"45.6"	""	"57.8"	"46.6"	""	"553"	"32"	"34.000"	"27.000"	"0.0163190598667515"	""	"0.0001889"	"0.0007594"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSFAIPLIEK"	"[K].tFSFAIPLIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"862.52319"	"1724.03911"	"1724.03987"	"-0.44"	"-0.00038"	"11/98"	"11"	"98"	"281165.115539551"	"HCD"	"MS2"	"28.77724"	"25.9"	"100.000"	"80.7032"	"27383"	"27383"	"27358"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.6"	""	"35.0"	""	"39.1"	""	"40.9"	""	"45.4"	"53.0"	""	"537"	"29"	"34.000"	"27.000"	"0.0322808000694775"	"16"	"0.0001889"	"0.000792"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSFAIPLIEK"	"[K].tFSFAIPLIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"862.52374"	"1724.04021"	"1724.03987"	"0.20"	"0.00017"	"8/98"	"8"	"98"	"265359.860778809"	"HCD"	"MS2"	"39.15799"	"23.1"	"100.000"	"80.6829"	"27324"	"27324"	"27296"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.8"	""	"30.2"	""	"33.5"	""	"45.5"	""	"36.7"	"42.7"	""	"506"	"25"	"34.000"	"27.000"	"0.0807459077340492"	"16"	"0.0001889"	"0.0007347"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDFLALDLGGTNFR"	"[RK].gDFLALDLGGTNFR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P27926"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1"	"P27926; P27881"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1; Hexokinase-2 OS=Rattus norvegicus OX=10116 GN=Hk2 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"862.96021"	"1724.91313"	"1724.91690"	"-2.18"	"-0.00188"	"5/126"	"5"	"126"	"368606.911254883"	"HCD"	"MS2"	"29.33703"	"33.0"	"100.000"	"70.9867"	"23378"	"23378"	"23347"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.5"	""	"50.6"	""	"45.9"	""	"52.4"	"0.7"	"59.9"	"58.6"	""	"1075"	"25"	"37.000"	"30.000"	"0.177573628307288"	"20"	"0.0002277"	"0.001284"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDFLALDLGGTNFR"	"[RK].gDFLALDLGGTNFR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P27926"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1"	"P27926; P27881"	"Hexokinase-3 OS=Rattus norvegicus OX=10116 GN=Hk3 PE=2 SV=1; Hexokinase-2 OS=Rattus norvegicus OX=10116 GN=Hk2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"862.96332"	"1724.91936"	"1724.91690"	"1.43"	"0.00123"	"5/126"	"5"	"126"	"281596.301818848"	"HCD"	"MS2"	"19.10328"	"29.2"	"100.000"	"70.9853"	"23429"	"23429"	"23402"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.3"	""	"42.1"	""	"40.9"	""	"41.4"	""	"56.7"	"56.9"	""	"1068"	"4"	"37.000"	"30.000"	"20.0697173890029"	"13"	"0.003107"	"0.05904"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSLGSALRPSTSR"	"[R].tYSLGSALRPSTSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.65405"	"1724.94760"	"1724.94926"	"-0.96"	"-0.00055"	"9/138"	"9"	"138"	"7839306.03466797"	"HCD"	"MS2"	"42.62019"	"317.0"	"100.000"	"34.4622"	"8548"	"8548"	"8522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"318.9"	""	"376.7"	""	"367.4"	""	"714.3"	""	"636.1"	"600.0"	""	"1069"	"14"	"37.000"	"30.000"	"2.29587220105832"	"13"	"0.0001308"	"0.0002784"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSLGSALRPSTSR"	"[R].tYSLGSALRPSTSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.65472"	"1724.94962"	"1724.94926"	"0.21"	"0.00012"	"8/138"	"8"	"138"	"7262838.80218506"	"HCD"	"MS2"	"29.23524"	"260.5"	"100.000"	"34.4281"	"8491"	"8491"	"8467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.7"	""	"321.2"	""	"298.7"	""	"538.8"	"8.8"	"539.7"	"505.9"	""	"1076"	"35"	"37.000"	"30.000"	"0.0176922177411279"	"15"	"0"	"3.206E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"862.97992"	"1724.95256"	"1724.96234"	"-5.67"	"-0.00489"	"9/106"	"9"	"106"	"1994336.2366333"	"HCD"	"MS2"	"0"	"122.9"	"100.000"	"61.5239"	"19575"	"19575"	"19555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.0"	""	"240.5"	""	"148.6"	""	"152.4"	"1.3"	"219.9"	"166.3"	""	"1056"	"12"	"37.000"	"30.000"	"3.43268476501152"	"22"	"0.0003839"	"0.002032"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"862.98065"	"1724.95403"	"1724.96234"	"-4.82"	"-0.00416"	"6/106"	"6"	"106"	"599288.085266113"	"HCD"	"MS2"	"33.48014"	"55.3"	"100.000"	"62.4730"	"19910"	"19910"	"19881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.0"	""	"93.8"	""	"80.3"	""	"77.0"	""	"103.3"	"85.4"	""	"1057"	"17"	"37.000"	"30.000"	"1.15357275840903"	"16"	"0.003107"	"0.06252"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"862.98108"	"1724.95488"	"1724.96234"	"-4.33"	"-0.00373"	"9/106"	"9"	"106"	"1993486.40917969"	"HCD"	"MS2"	"0"	"133.8"	"100.000"	"61.3953"	"19469"	"19469"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.5"	""	"256.7"	""	"152.0"	""	"170.7"	"2.1"	"242.7"	"200.8"	""	"1043"	"7"	"37.000"	"30.000"	"9.64393584797068"	"16"	"0.004346"	"0.1211"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"575.65698"	"1724.95639"	"1724.96234"	"-3.45"	"-0.00198"	"7/106"	"7"	"106"	"2770538.91693115"	"HCD"	"MS2"	"37.73928"	"82.7"	"100.000"	"61.6393"	"19569"	"19569"	"19545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.0"	""	"107.8"	""	"100.3"	""	"137.2"	""	"169.0"	"167.2"	""	"1061"	"7"	"37.000"	"30.000"	"10.6092672184017"	"14"	"0.0005564"	"0.003598"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.65698"	"1724.95639"	"1724.96234"	"-3.45"	"-0.00198"	"7/106"	"7"	"106"	"3268579.28875732"	"HCD"	"MS2"	"12.72304"	"107.9"	"100.000"	"61.4243"	"19535"	"19535"	"19507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.2"	""	"174.3"	""	"116.0"	""	"153.3"	"2.0"	"222.6"	"205.7"	""	"1061"	"6"	"37.000"	"30.000"	"11.9312346839588"	"13"	"0.001846"	"0.02548"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"862.98199"	"1724.95671"	"1724.96234"	"-3.26"	"-0.00282"	"13/106"	"13"	"106"	"406703.050292969"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"62.7113"	"20060"	"20060"	"20035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.2"	""	"52.1"	""	"52.7"	""	"58.6"	"0.9"	"62.5"	"54.5"	""	"1054"	"14"	"37.000"	"30.000"	"1.9852290206452"	"17"	"0.0006037"	"0.004247"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"575.65826"	"1724.96024"	"1724.96234"	"-1.22"	"-0.00070"	"7/106"	"7"	"106"	"3318977.19805908"	"HCD"	"MS2"	"5.540816"	"101.4"	"100.000"	"61.2539"	"19412"	"19412"	"19385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.7"	""	"149.3"	""	"135.9"	""	"141.5"	"3.2"	"195.8"	"188.2"	""	"1051"	"18"	"37.000"	"30.000"	"0.898613048079946"	"17"	"0.000523"	"0.003243"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"862.98395"	"1724.96062"	"1724.96234"	"-1.00"	"-0.00086"	"18/106"	"18"	"106"	"1509837.61474609"	"HCD"	"MS2"	"0"	"116.0"	"100.000"	"61.0764"	"19339"	"19339"	"19321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"190.6"	""	"206.2"	""	"162.1"	""	"155.2"	"2.8"	"191.2"	"188.2"	""	"1044"	"35"	"37.000"	"30.000"	"0.01474587346906"	"18"	"0"	"1.514E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9492"	"0.0000"	"1"	"1"	"1"	"862.98431"	"1724.96135"	"1724.96234"	"-0.57"	"-0.00050"	"10/106"	"10"	"106"	"1798448.06469727"	"HCD"	"MS2"	"0"	"148.2"	"100.000"	"60.2394"	"19051"	"19051"	"19027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.5"	""	"125.1"	""	"180.0"	""	"138.5"	""	"603.9"	"268.8"	""	"1016"	"59"	"37.000"	"30.000"	"6.17822488328356E-05"	"20"	"0"	"9.47E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"862.98431"	"1724.96135"	"1724.96234"	"-0.57"	"-0.00050"	"10/106"	"10"	"106"	"1726129.19403076"	"HCD"	"MS2"	"0"	"138.5"	"100.000"	"60.3918"	"19113"	"19113"	"19091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.1"	""	"129.5"	""	"180.4"	""	"136.0"	""	"524.7"	"249.2"	""	"1016"	"60"	"37.000"	"30.000"	"5.18637257723502E-05"	"21"	"0"	"1.214E-05"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"862.98431"	"1724.96135"	"1724.96234"	"-0.57"	"-0.00050"	"10/106"	"10"	"106"	"192328984.990234"	"HCD"	"MS2"	"0"	"395.1"	"3.247"	"58.6948"	"18422"	"18422"	"18405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"627.7"	""	"631.6"	""	"588.1"	""	"535.0"	"9.9"	"700.4"	"645.1"	""	"1016"	"62"	"37.000"	"30.000"	"3.36405983880495E-05"	"21"	"0"	"0.0001163"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"575.65869"	"1724.96152"	"1724.96234"	"-0.48"	"-0.00027"	"7/106"	"7"	"106"	"37905248.9382324"	"HCD"	"MS2"	"5.17037"	"184.0"	"20.080"	"59.0903"	"18582"	"18582"	"18565"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.1"	""	"306.5"	""	"270.7"	""	"255.7"	""	"314.4"	"314.7"	""	"1015"	"35"	"37.000"	"30.000"	"0.0159748226940642"	"16"	"0"	"0.0001553"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"575.65869"	"1724.96152"	"1724.96234"	"-0.48"	"-0.00027"	"16/106"	"16"	"106"	"14409818.3222656"	"HCD"	"MS2"	"0"	"348.8"	"100.000"	"57.9186"	"18054"	"18054"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"496.6"	""	"584.7"	""	"504.8"	""	"518.3"	""	"632.3"	"570.1"	""	"1015"	"29"	"37.000"	"30.000"	"0.0711927955065193"	"16"	"0"	"0.0001138"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"862.98450"	"1724.96172"	"1724.96234"	"-0.36"	"-0.00031"	"10/106"	"10"	"106"	"610428.863769531"	"HCD"	"MS2"	"0"	"59.5"	"100.000"	"60.6318"	"19158"	"19158"	"19129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.5"	""	"79.9"	""	"86.5"	"1.8"	"74.2"	"3.4"	"138.1"	"103.8"	""	"1016"	"52"	"37.000"	"30.000"	"0.000324985296425186"	"22"	"0"	"7.506E-06"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9492"	"0.0000"	"1"	"1"	"1"	"862.98450"	"1724.96172"	"1724.96234"	"-0.36"	"-0.00031"	"10/106"	"10"	"106"	"5609189.88604736"	"HCD"	"MS2"	"0"	"195.0"	"100.000"	"58.0668"	"18168"	"18168"	"18149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.8"	""	"311.0"	""	"272.1"	""	"295.0"	"2.9"	"335.5"	"313.3"	""	"1016"	"59"	"37.000"	"30.000"	"6.51423935989259E-05"	"19"	"0"	"2.659E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"862.98456"	"1724.96184"	"1724.96234"	"-0.29"	"-0.00025"	"10/106"	"10"	"106"	"27047133.0418701"	"HCD"	"MS2"	"0"	"491.2"	"28.993"	"59.0104"	"18550"	"18550"	"18533"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"771.6"	""	"800.9"	""	"720.3"	""	"685.2"	"5.4"	"850.0"	"813.1"	""	"1016"	"62"	"37.000"	"30.000"	"3.34860338784115E-05"	"20"	"0"	"5.794E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"862.98462"	"1724.96196"	"1724.96234"	"-0.22"	"-0.00019"	"10/106"	"10"	"106"	"1485943.11798096"	"HCD"	"MS2"	"16.61931"	"96.3"	"100.000"	"59.6507"	"18810"	"18810"	"18789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.1"	""	"153.6"	""	"144.7"	""	"125.8"	"3.1"	"177.2"	"165.9"	""	"1014"	"57"	"37.000"	"30.000"	"0.000108644553476787"	"19"	"0"	"1.371E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"862.98462"	"1724.96196"	"1724.96234"	"-0.22"	"-0.00019"	"10/106"	"10"	"106"	"4068369.94006348"	"HCD"	"MS2"	"0"	"266.8"	"100.000"	"59.1191"	"18540"	"18540"	"18521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"422.5"	""	"440.5"	""	"383.3"	""	"359.9"	"2.6"	"466.7"	"448.5"	""	"1014"	"60"	"37.000"	"30.000"	"4.89787795647835E-05"	"21"	"0"	"2.154E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"575.65887"	"1724.96207"	"1724.96234"	"-0.16"	"-0.00009"	"7/106"	"7"	"106"	"22997080.817688"	"HCD"	"MS2"	"7.910537"	"407.6"	"78.368"	"58.1060"	"18184"	"18184"	"18165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"630.3"	""	"688.7"	""	"587.0"	""	"592.6"	"4.4"	"705.8"	"646.3"	""	"1014"	"35"	"37.000"	"30.000"	"0.0158492223913185"	"16"	"0"	"7.447E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"575.65887"	"1724.96207"	"1724.96234"	"-0.16"	"-0.00009"	"7/106"	"7"	"106"	"8290896.03967285"	"HCD"	"MS2"	"20.43061"	"214.3"	"100.000"	"59.2036"	"18574"	"18574"	"18553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.7"	""	"322.1"	""	"310.5"	""	"311.6"	"6.2"	"374.5"	"378.9"	""	"1014"	"33"	"37.000"	"30.000"	"0.0272902779735758"	"16"	"0"	"0.0001304"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9365"	"0.0000"	"1"	"1"	"1"	"862.98486"	"1724.96245"	"1724.96234"	"0.06"	"0.00005"	"10/106"	"10"	"106"	"216737504.399414"	"HCD"	"MS2"	"0"	"539.1"	"4.008"	"58.3730"	"18294"	"18294"	"18277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"907.9"	""	"920.0"	""	"771.1"	""	"715.7"	"8.1"	"921.9"	"852.8"	""	"1016"	"63"	"37.000"	"30.000"	"2.33272590521129E-05"	"21"	"0"	"0.0001735"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"575.65912"	"1724.96280"	"1724.96234"	"0.27"	"0.00015"	"6/106"	"6"	"106"	"8035974.5526123"	"HCD"	"MS2"	"16.17825"	"207.1"	"100.000"	"59.4154"	"18714"	"18714"	"18693"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"291.8"	""	"283.1"	""	"304.0"	""	"318.0"	"2.2"	"385.7"	"377.3"	""	"1004"	"20"	"37.000"	"30.000"	"0.522039923246188"	"18"	"0.0006037"	"0.004364"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"862.98517"	"1724.96306"	"1724.96234"	"0.42"	"0.00036"	"6/106"	"6"	"106"	"266559.748596191"	"HCD"	"MS2"	"0"	"27.5"	"100.000"	"62.8672"	"20071"	"20071"	"20041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.1"	""	"39.1"	""	"39.7"	""	"32.2"	"1.2"	"57.9"	"49.3"	""	"1004"	"16"	"37.000"	"30.000"	"1.22660213745237"	"14"	"0.003107"	"0.05908"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"862.98517"	"1724.96306"	"1724.96234"	"0.42"	"0.00036"	"10/106"	"10"	"106"	"39166962.7133789"	"HCD"	"MS2"	"0"	"405.8"	"16.306"	"58.8268"	"18426"	"18426"	"18409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"632.6"	""	"687.1"	""	"585.5"	""	"549.8"	"7.9"	"697.4"	"678.1"	""	"1004"	"59"	"37.000"	"30.000"	"6.26186524149957E-05"	"22"	"0"	"5.234E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"862.98523"	"1724.96318"	"1724.96234"	"0.49"	"0.00042"	"10/106"	"10"	"106"	"1741997.26965332"	"HCD"	"MS2"	"0"	"134.7"	"100.000"	"60.0646"	"18926"	"18926"	"18905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.1"	""	"112.1"	""	"156.9"	""	"127.3"	"2.1"	"534.7"	"250.4"	""	"1004"	"60"	"37.000"	"30.000"	"5.25658531121552E-05"	"19"	"0"	"9.738E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"862.98523"	"1724.96318"	"1724.96234"	"0.49"	"0.00042"	"10/106"	"10"	"106"	"218017254.881836"	"HCD"	"MS2"	"0"	"593.2"	"4.282"	"58.2065"	"18172"	"18172"	"18155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"938.2"	""	"1033.4"	""	"864.3"	""	"826.1"	"9.6"	"991.7"	"945.5"	""	"1004"	"62"	"37.000"	"30.000"	"3.30905295412649E-05"	"20"	"7.476E-05"	"0.0002008"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"862.98529"	"1724.96330"	"1724.96234"	"0.56"	"0.00048"	"10/106"	"10"	"106"	"7338471.68139648"	"HCD"	"MS2"	"0"	"509.1"	"100.000"	"57.9117"	"18051"	"18051"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"739.1"	""	"854.1"	""	"745.5"	""	"759.9"	""	"892.9"	"833.4"	""	"1004"	"41"	"37.000"	"30.000"	"0.00384329496669451"	"20"	"0"	"5.666E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9180"	"0.0000"	"1"	"1"	"1"	"862.98535"	"1724.96343"	"1724.96234"	"0.63"	"0.00054"	"10/106"	"10"	"106"	"1483112.96777344"	"HCD"	"MS2"	"4.988065"	"105.6"	"100.000"	"59.4480"	"18674"	"18674"	"18649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.8"	""	"177.1"	""	"143.6"	""	"153.0"	"0.8"	"185.4"	"185.7"	""	"1005"	"61"	"37.000"	"30.000"	"4.42727058686527E-05"	"21"	"0"	"1.068E-05"	"1.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"862.98535"	"1724.96343"	"1724.96234"	"0.63"	"0.00054"	"10/106"	"10"	"106"	"2977500.90374756"	"HCD"	"MS2"	"0"	"206.7"	"100.000"	"59.3320"	"18680"	"18680"	"18661"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"324.3"	""	"342.0"	""	"302.8"	""	"286.8"	"1.9"	"352.1"	"345.4"	""	"1005"	"61"	"37.000"	"30.000"	"3.71651650716764E-05"	"22"	"0"	"1.445E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"862.98535"	"1724.96343"	"1724.96234"	"0.63"	"0.00054"	"10/106"	"10"	"106"	"189481654.075195"	"HCD"	"MS2"	"0"	"454.4"	"3.822"	"58.5140"	"18298"	"18298"	"18281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"706.6"	""	"784.3"	""	"665.3"	""	"615.4"	"6.1"	"760.9"	"758.6"	""	"1005"	"60"	"37.000"	"30.000"	"4.76580277808701E-05"	"24"	"7.476E-05"	"0.0001938"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDTMNFDVIK"	"[R].aLDTMNFDVIk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"575.65948"	"1724.96390"	"1724.96571"	"-1.05"	"-0.00060"	"6/100"	"6"	"100"	"4111089.14337158"	"HCD"	"MS2"	"20.4704"	"127.3"	"100.000"	"63.5058"	"20385"	"20385"	"20355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.4"	""	"178.7"	""	"170.0"	""	"167.6"	"1.9"	"250.2"	"252.0"	""	"989"	"32"	"36.000"	"29.000"	"0.0284555049013224"	"17"	"0.0001889"	"0.0003928"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDTMNFDVIK"	"[R].aLDTMNFDVIk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8553"	"0.0000"	"1"	"1"	"1"	"862.98602"	"1724.96477"	"1724.96571"	"-0.55"	"-0.00047"	"20/100"	"20"	"100"	"2413078.83270264"	"HCD"	"MS2"	"9.779257"	"203.6"	"100.000"	"63.5405"	"20399"	"20399"	"20371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"326.3"	""	"286.3"	""	"303.4"	""	"264.8"	"1.7"	"360.6"	"384.7"	""	"994"	"76"	"36.000"	"29.000"	"1.29525831434945E-06"	"28"	"0"	"3.749E-06"	"1.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDTMNFDVIK"	"[R].aLDTMNFDVIk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"862.98621"	"1724.96514"	"1724.96571"	"-0.34"	"-0.00029"	"10/100"	"10"	"100"	"2442621.12744141"	"HCD"	"MS2"	"0"	"223.3"	"100.000"	"63.4659"	"20315"	"20315"	"20297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.1"	""	"343.5"	""	"315.9"	""	"289.7"	""	"426.7"	"408.1"	""	"1000"	"59"	"36.000"	"30.000"	"6.23691757121472E-05"	"24"	"0"	"1.169E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDTMNFDVIK"	"[R].aLDTMNFDVIk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"575.65997"	"1724.96537"	"1724.96571"	"-0.20"	"-0.00012"	"7/100"	"7"	"100"	"4753615.87286377"	"HCD"	"MS2"	"18.35208"	"140.2"	"100.000"	"63.4754"	"20319"	"20319"	"20297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.5"	"2.9"	"201.3"	""	"217.8"	""	"172.2"	"1.7"	"272.9"	"262.1"	""	"1004"	"45"	"37.000"	"30.000"	"0.00170491886840385"	"23"	"0.0001308"	"0.000221"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"575.66010"	"1724.96573"	"1724.96234"	"1.96"	"0.00113"	"7/106"	"7"	"106"	"415900888.976563"	"HCD"	"MS2"	"3.54217"	"272.8"	"2.883"	"58.5530"	"18314"	"18314"	"18297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"405.5"	""	"467.9"	""	"398.4"	""	"388.0"	""	"467.6"	"455.8"	""	"1002"	"37"	"36.000"	"30.000"	"0.0111131640631991"	"18"	"0.0001308"	"0.000225"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"575.66028"	"1724.96628"	"1724.96234"	"2.28"	"0.00131"	"7/106"	"7"	"106"	"321149054.462891"	"HCD"	"MS2"	"3.753442"	"221.6"	"3.096"	"58.7737"	"18454"	"18454"	"18437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.9"	""	"368.2"	""	"325.9"	""	"304.7"	""	"385.0"	"363.0"	""	"993"	"34"	"36.000"	"29.000"	"0.0204135836528395"	"17"	"0.0001859"	"0.0003386"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"575.66040"	"1724.96665"	"1724.96234"	"2.50"	"0.00143"	"7/106"	"7"	"106"	"374176079.439453"	"HCD"	"MS2"	"3.345747"	"234.4"	"2.730"	"58.2109"	"18173"	"18173"	"18155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.0"	""	"391.6"	""	"365.2"	""	"332.4"	"3.6"	"376.0"	"381.5"	""	"995"	"37"	"36.000"	"29.000"	"0.0110609667059907"	"18"	"0.0001308"	"0.0002095"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"575.66046"	"1724.96683"	"1724.96234"	"2.60"	"0.00150"	"7/106"	"7"	"106"	"518137037.453125"	"HCD"	"MS2"	"3.257404"	"256.2"	"2.297"	"58.4120"	"18310"	"18310"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"379.3"	""	"432.7"	""	"377.9"	""	"361.5"	""	"453.7"	"420.0"	""	"995"	"37"	"36.000"	"29.000"	"0.0110101461802881"	"17"	"0.0001859"	"0.0003438"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"575.66046"	"1724.96683"	"1724.96234"	"2.60"	"0.00150"	"7/106"	"7"	"106"	"52212104.3654785"	"HCD"	"MS2"	"4.033566"	"279.3"	"22.627"	"58.8754"	"18442"	"18442"	"18425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"415.5"	""	"465.8"	""	"422.2"	""	"383.3"	""	"484.0"	"472.2"	""	"995"	"36"	"36.000"	"29.000"	"0.011292577638122"	"18"	"0"	"9.205E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLVSSEDYGR"	"[K].kLLVSSEDYGR.[D]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.66949"	"1724.99393"	"1724.99471"	"-0.45"	"-0.00026"	"5/106"	"5"	"106"	"5000392.40710449"	"HCD"	"MS2"	"0"	"311.2"	"100.000"	"35.6665"	"9042"	"9042"	"9017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"476.9"	""	"480.2"	""	"478.4"	""	"430.5"	"1.0"	"504.6"	"572.3"	""	"772"	"6"	"35.000"	"28.000"	"8.94514334887834"	"13"	"0"	"0.0001522"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLVSSEDYGR"	"[K].kLLVSSEDYGR.[D]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.67004"	"1724.99558"	"1724.99471"	"0.51"	"0.00029"	"8/106"	"8"	"106"	"6132709.84259033"	"HCD"	"MS2"	"37.45677"	"288.3"	"100.000"	"35.5516"	"8952"	"8952"	"8923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"439.6"	""	"492.2"	""	"455.0"	""	"353.9"	"5.0"	"441.7"	"539.0"	""	"756"	"28"	"35.000"	"28.000"	"0.0576091940935376"	"14"	"0"	"6.134E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEAMTNSK"	"[R].kLEAmTNSk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.67688"	"1725.01609"	"1725.01837"	"-1.32"	"-0.00076"	"8/90"	"8"	"90"	"1584796.09448242"	"HCD"	"MS2"	"48.51931"	"93.3"	"100.000"	"27.1005"	"5549"	"5549"	"5536"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.9"	""	"121.4"	"2.4"	"108.3"	""	"171.6"	""	"158.3"	"175.6"	""	"627"	"17"	"34.000"	"27.000"	"0.651984911407008"	"14"	"0.001686"	"0.02281"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEAMTNSK"	"[R].kLEAmTNSk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.67688"	"1725.01609"	"1725.01837"	"-1.32"	"-0.00076"	"13/90"	"13"	"90"	"1555420.32489014"	"HCD"	"MS2"	"0"	"93.3"	"100.000"	"27.1704"	"5614"	"5614"	"5596"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.0"	""	"124.4"	""	"127.6"	""	"174.0"	""	"153.6"	"168.9"	""	"627"	"19"	"34.000"	"27.000"	"0.385689259649681"	"14"	"0.003286"	"0.07384"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTPVFLGSALK"	"[R].sFTPVFLGSALk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07803"	"Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2"	"Q07803"	"Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.68292"	"1725.03421"	"1725.03511"	"-0.52"	"-0.00030"	"6/104"	"6"	"104"	"1791111.30804443"	"HCD"	"MS2"	"38.83387"	"43.9"	"100.000"	"69.3873"	"22777"	"22777"	"22746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.1"	""	"52.5"	""	"60.8"	""	"67.5"	"1.8"	"97.9"	"89.2"	""	"487"	"3"	"33.000"	"26.000"	"11.0280560706532"	"13"	"0.0001889"	"0.0007967"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTPVFLGSALK"	"[R].sFTPVFLGSALk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07803"	"Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2"	"Q07803"	"Elongation factor G, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gfm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.68311"	"1725.03476"	"1725.03511"	"-0.20"	"-0.00012"	"11/104"	"11"	"104"	"1809579.86236572"	"HCD"	"MS2"	"44.89468"	"46.5"	"100.000"	"69.5111"	"22776"	"22776"	"22746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.5"	""	"53.6"	""	"59.8"	""	"74.4"	""	"99.2"	"94.4"	""	"487"	"9"	"33.000"	"26.000"	"3.29229669137807"	"13"	"0.0001889"	"0.0009079"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"575.98553"	"1725.94205"	"1725.94636"	"-2.50"	"-0.00144"	"12/106"	"12"	"106"	"4519423.91967773"	"HCD"	"MS2"	"6.016982"	"135.0"	"100.000"	"63.7107"	"20415"	"20415"	"20393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.0"	""	"174.6"	""	"192.2"	""	"195.1"	""	"262.8"	"260.4"	""	"1001"	"39"	"36.000"	"30.000"	"0.0057597559466669"	"22"	"0.0002277"	"0.001348"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"575.98572"	"1725.94260"	"1725.94636"	"-2.18"	"-0.00125"	"12/106"	"12"	"106"	"5017454.02392578"	"HCD"	"MS2"	"8.505349"	"135.9"	"100.000"	"63.8449"	"20523"	"20523"	"20499"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.2"	""	"181.5"	""	"179.4"	""	"212.4"	""	"273.7"	"267.5"	""	"999"	"46"	"36.000"	"29.000"	"0.00133209590292848"	"25"	"0.0001889"	"0.000375"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"863.47614"	"1725.94499"	"1725.94636"	"-0.79"	"-0.00068"	"9/106"	"9"	"106"	"598586.515197754"	"HCD"	"MS2"	"0"	"55.1"	"100.000"	"64.0913"	"20624"	"20624"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.7"	""	"74.4"	""	"85.3"	""	"78.0"	""	"100.1"	"98.9"	""	"977"	"46"	"36.000"	"29.000"	"0.00119912530531214"	"16"	"0.0003146"	"0.001422"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"863.47650"	"1725.94573"	"1725.94636"	"-0.37"	"-0.00032"	"9/106"	"9"	"106"	"596040.87878418"	"HCD"	"MS2"	"0"	"52.6"	"100.000"	"64.0307"	"20546"	"20546"	"20521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.4"	""	"78.0"	""	"77.7"	""	"75.7"	""	"100.4"	"91.2"	""	"961"	"47"	"36.000"	"29.000"	"0.00105121946030776"	"23"	"0"	"8.591E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"863.47668"	"1725.94609"	"1725.94636"	"-0.15"	"-0.00013"	"10/106"	"10"	"106"	"2659784.29626465"	"HCD"	"MS2"	"0"	"197.5"	"100.000"	"63.7481"	"20484"	"20484"	"20467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"280.6"	""	"277.3"	""	"282.8"	""	"301.8"	""	"388.4"	"345.6"	""	"960"	"51"	"36.000"	"29.000"	"0.000394676471974594"	"25"	"0"	"5.809E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"863.47931"	"1725.95134"	"1725.94636"	"2.89"	"0.00249"	"9/106"	"9"	"106"	"2750168.53137207"	"HCD"	"MS2"	"0"	"211.8"	"100.000"	"63.7012"	"20411"	"20411"	"20393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.7"	""	"307.5"	""	"275.2"	""	"312.4"	"0.2"	"415.2"	"394.1"	""	"963"	"59"	"36.000"	"29.000"	"6.07569957905408E-05"	"27"	"0"	"2.403E-05"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"863.48315"	"1725.95903"	"1725.94636"	"7.34"	"0.00634"	"10/106"	"10"	"106"	"1646725.2510376"	"HCD"	"MS2"	"0"	"132.5"	"100.000"	"57.9979"	"18140"	"18140"	"18117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.1"	""	"175.1"	""	"150.7"	""	"257.7"	""	"286.6"	"234.2"	""	"908"	"35"	"36.000"	"29.000"	"0.0129734610669223"	""	"0.0001889"	"0.000728"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDYNASAWLTK"	"[K].vDYNASAWLTk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"863.48340"	"1725.95952"	"1725.95759"	"1.12"	"0.00096"	"5/110"	"5"	"110"	"1301264.57696533"	"HCD"	"MS2"	"0"	"122.2"	"100.000"	"57.8310"	"18018"	"18018"	"17995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.6"	""	"146.9"	""	"126.0"	""	"257.6"	""	"305.9"	"211.4"	""	"900"	"22"	"36.000"	"29.000"	"0.261946447996892"	"25"	"0.0001889"	"0.0004831"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.48346"	"1725.95964"	"1725.94636"	"7.70"	"0.00664"	"9/106"	"9"	"106"	"1328968.9744873"	"HCD"	"MS2"	"0"	"98.0"	"100.000"	"61.2239"	"19453"	"19453"	"19427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.9"	""	"170.2"	""	"133.8"	""	"139.6"	""	"174.1"	"159.0"	""	"900"	"20"	"36.000"	"29.000"	"0.464742632592628"	"14"	"0.000523"	"0.003141"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGQQYLYVLR"	"[K].lFPGQQYLYVLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"863.49731"	"1725.98735"	"1725.98894"	"-0.92"	"-0.00080"	"11/104"	"11"	"104"	"5083920.90185547"	"HCD"	"MS2"	"0"	"190.7"	"100.000"	"75.2489"	"25169"	"25169"	"25151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.4"	""	"314.4"	""	"210.8"	""	"373.8"	""	"377.7"	"312.2"	""	"780"	"32"	"35.000"	"28.000"	"0.0244379407222211"	"16"	"0.0001859"	"0.0003505"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGQQYLYVLR"	"[K].lFPGQQYLYVLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"863.49762"	"1725.98796"	"1725.98894"	"-0.57"	"-0.00049"	"6/104"	"6"	"104"	"407757.210388184"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"75.5720"	"25301"	"25301"	"25279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.6"	""	"34.7"	""	"28.6"	""	"45.8"	"0.7"	"42.8"	"42.6"	""	"775"	"33"	"35.000"	"28.000"	"0.0176714304931127"	"15"	"0.0001889"	"0.001103"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGQQYLYVLR"	"[K].lFPGQQYLYVLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"863.49786"	"1725.98845"	"1725.98894"	"-0.29"	"-0.00025"	"17/104"	"17"	"104"	"4837170.80499268"	"HCD"	"MS2"	"0"	"176.6"	"100.000"	"75.2588"	"25122"	"25122"	"25105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.4"	""	"273.6"	""	"211.6"	""	"362.3"	"4.0"	"319.9"	"291.8"	""	"769"	"44"	"35.000"	"28.000"	"0.00159549829392912"	"18"	"0"	"1.276E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGQQYLYVLR"	"[K].lFPGQQYLYVLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"863.49799"	"1725.98870"	"1725.98894"	"-0.14"	"-0.00012"	"6/104"	"6"	"104"	"402957.5703125"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"75.5843"	"25254"	"25254"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"40.7"	""	"30.2"	""	"47.6"	""	"41.0"	"42.5"	""	"766"	"38"	"35.000"	"28.000"	"0.0055360343219569"	"17"	"0.0001889"	"0.0004273"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLAFLYMDK"	"[K].lPGLAFLYMDk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.50385"	"1726.00041"	"1726.00137"	"-0.55"	"-0.00048"	"8/80"	"8"	"80"	"406461.972229004"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"84.4303"	"28903"	"28903"	"28881"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.0"	""	"21.1"	""	"18.8"	""	"54.2"	"0.7"	"66.8"	"70.8"	""	"683"	"35"	"35.000"	"28.000"	"0.0106755610387283"	"15"	"0.0001889"	"0.0003778"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLAFLYMDK"	"[K].lPGLAFLYMDk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"863.50403"	"1726.00078"	"1726.00137"	"-0.34"	"-0.00030"	"7/80"	"7"	"80"	"469030.076416016"	"HCD"	"MS2"	"41.13383"	"25.3"	"100.000"	"84.3618"	"28824"	"28824"	"28801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.4"	""	"21.9"	""	"18.4"	""	"46.2"	""	"76.0"	"66.2"	""	"684"	"15"	"35.000"	"28.000"	"1.10160552661893"	"15"	"0.0003839"	"0.001739"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLHMLVDLAK"	"[K].eVLHMLVDLAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.01569"	"1726.03250"	"1726.03373"	"-0.71"	"-0.00041"	"12/94"	"12"	"94"	"6395076.5213623"	"HCD"	"MS2"	"14.57388"	"156.2"	"100.000"	"68.6541"	"22477"	"22477"	"22458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.6"	""	"212.0"	""	"229.9"	""	"184.5"	""	"297.4"	"335.2"	""	"529"	"39"	"34.000"	"27.000"	"0.00344687612900633"	"15"	"7.476E-05"	"0.0001989"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLHMLVDLAK"	"[K].eVLHMLVDLAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.01581"	"1726.03287"	"1726.03373"	"-0.50"	"-0.00029"	"12/94"	"12"	"94"	"6146894.83862305"	"HCD"	"MS2"	"13.68585"	"150.5"	"100.000"	"68.8169"	"22492"	"22492"	"22474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"214.9"	""	"217.1"	""	"226.1"	""	"164.6"	""	"290.7"	"315.2"	""	"529"	"38"	"34.000"	"27.000"	"0.00460707918012081"	"15"	"0"	"5.277E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLHMLVDLAK"	"[K].eVLHMLVDLAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"576.01587"	"1726.03305"	"1726.03373"	"-0.39"	"-0.00023"	"13/94"	"13"	"94"	"6213964.75061035"	"HCD"	"MS2"	"11.58728"	"144.2"	"100.000"	"68.3569"	"22356"	"22356"	"22330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.4"	""	"217.9"	""	"223.3"	""	"164.8"	"2.2"	"257.5"	"279.7"	""	"535"	"47"	"34.000"	"27.000"	"0.000512063459943141"	"17"	"0"	"0.0001021"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLHMLVDLAK"	"[K].eVLHMLVDLAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"863.52045"	"1726.03362"	"1726.03373"	"-0.07"	"-0.00006"	"15/94"	"15"	"94"	"495147.548950195"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"68.5506"	"22435"	"22435"	"22410"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.6"	""	"56.1"	""	"57.8"	""	"50.8"	""	"70.8"	"76.6"	""	"507"	"48"	"34.000"	"27.000"	"0.000364735439587856"	"18"	"0"	"4.243E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLHMLVDLAK"	"[K].eVLHMLVDLAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.9811"	"0.0000"	"1"	"1"	"1"	"576.01624"	"1726.03415"	"1726.03373"	"0.24"	"0.00014"	"8/94"	"8"	"94"	"6027261.46789551"	"HCD"	"MS2"	"20.68308"	"144.4"	"100.000"	"68.5173"	"22370"	"22370"	"22346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.9"	""	"212.8"	""	"219.4"	""	"158.2"	""	"254.1"	"290.4"	""	"505"	"53"	"34.000"	"27.000"	"0.00012538956116621"	"17"	"0"	"6.878E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLHMLVDLAK"	"[K].eVLHMLVDLAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"863.52106"	"1726.03484"	"1726.03373"	"0.64"	"0.00055"	"16/94"	"16"	"94"	"530534.36932373"	"HCD"	"MS2"	"54.06185"	"39.4"	"100.000"	"68.6878"	"22440"	"22440"	"22410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.1"	""	"50.9"	""	"56.8"	""	"52.3"	"1.6"	"74.3"	"82.8"	""	"505"	"56"	"34.000"	"27.000"	"6.47532219220724E-05"	"24"	"0"	"2.164E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAGYDPTPTMR"	"[R].lFLAGYDPTPTmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"863.95490"	"1726.90251"	"1726.90356"	"-0.61"	"-0.00052"	"7/104"	"7"	"104"	"884455.099243164"	"HCD"	"MS2"	"34.11313"	"49.8"	"100.000"	"56.6431"	"17587"	"17587"	"17557"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.0"	""	"63.5"	""	"65.8"	""	"95.5"	"1.3"	"90.4"	"95.1"	""	"940"	"33"	"36.000"	"29.000"	"0.0243275211016767"	"20"	"0.000523"	"0.002876"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLAGYDPTPTMR"	"[R].lFLAGYDPTPTmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.95563"	"1726.90398"	"1726.90356"	"0.24"	"0.00021"	"5/104"	"5"	"104"	"776999.16003418"	"HCD"	"MS2"	"0"	"42.5"	"100.000"	"56.4701"	"17462"	"17462"	"17435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.8"	""	"44.4"	""	"51.4"	""	"91.6"	"0.4"	"87.1"	"81.9"	""	"956"	"21"	"36.000"	"29.000"	"0.424060573754146"	"14"	"0.0006037"	"0.005899"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPETDFLTGK"	"[K].fNPETDFLTGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"863.97144"	"1726.93559"	"1726.94161"	"-3.48"	"-0.00301"	"9/108"	"9"	"108"	"3104626.48010254"	"HCD"	"MS2"	"0"	"245.0"	"100.000"	"59.8021"	"18872"	"18872"	"18853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"430.3"	""	"366.8"	""	"350.0"	""	"341.1"	""	"417.2"	"411.7"	""	"1029"	"58"	"37.000"	"30.000"	"7.62755554807593E-05"	"22"	"0"	"2.33E-05"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPETDFLTGK"	"[K].fNPETDFLTGk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"863.97247"	"1726.93767"	"1726.94161"	"-2.28"	"-0.00197"	"17/108"	"17"	"108"	"4422738.47442627"	"HCD"	"MS2"	"0"	"382.7"	"100.000"	"59.7126"	"18782"	"18782"	"18761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"661.2"	""	"557.9"	""	"565.6"	""	"540.5"	""	"642.7"	"659.3"	""	"1031"	"39"	"37.000"	"30.000"	"0.0057973386407995"	"22"	"0"	"4.76E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENLLGSYFPK"	"[K].tENLLGSYFPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"863.99072"	"1726.97417"	"1726.97799"	"-2.21"	"-0.00191"	"8/108"	"8"	"108"	"2649034.63586426"	"HCD"	"MS2"	"0"	"201.5"	"100.000"	"60.8187"	"19287"	"19287"	"19267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"252.9"	""	"244.3"	""	"272.8"	""	"357.1"	""	"391.3"	"396.7"	""	"908"	"35"	"36.000"	"29.000"	"0.0128545196609292"	"22"	"0"	"4.011E-05"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENLLGSYFPK"	"[K].tENLLGSYFPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"576.32977"	"1726.97477"	"1726.97799"	"-1.87"	"-0.00108"	"7/108"	"7"	"108"	"9557833.64910889"	"HCD"	"MS2"	"26.20306"	"230.6"	"92.730"	"60.8137"	"19285"	"19285"	"19267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"293.1"	""	"271.6"	""	"314.6"	""	"416.8"	""	"443.5"	"452.5"	""	"893"	"25"	"36.000"	"29.000"	"0.14921808537166"	"16"	"0"	"0.0001293"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENLLGSYFPK"	"[K].tENLLGSYFPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"863.99164"	"1726.97600"	"1726.97799"	"-1.15"	"-0.00100"	"7/108"	"7"	"108"	"1325465.34448242"	"HCD"	"MS2"	"0"	"111.9"	"100.000"	"61.1387"	"19418"	"19418"	"19395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.8"	""	"157.1"	""	"156.8"	""	"179.8"	"1.2"	"214.9"	"200.2"	""	"915"	"45"	"36.000"	"29.000"	"0.00143347821887438"	"22"	"0"	"6.15E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENLLGSYFPK"	"[K].tENLLGSYFPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.8367"	"0.0000"	"1"	"1"	"1"	"576.33051"	"1726.97696"	"1726.97799"	"-0.60"	"-0.00034"	"9/108"	"9"	"108"	"12352220.057312"	"HCD"	"MS2"	"18.95804"	"281.9"	"100.000"	"60.6803"	"19178"	"19178"	"19161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"368.1"	""	"351.6"	"3.3"	"379.1"	""	"492.5"	""	"530.2"	"552.9"	""	"892"	"49"	"36.000"	"29.000"	"0.000502730065454278"	"23"	"0"	"2.847E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENLLGSYFPK"	"[K].tENLLGSYFPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"863.99213"	"1726.97698"	"1726.97799"	"-0.59"	"-0.00051"	"9/108"	"9"	"108"	"3317682.54742432"	"HCD"	"MS2"	"0"	"248.1"	"100.000"	"60.6847"	"19179"	"19179"	"19161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"339.7"	""	"304.8"	""	"344.1"	""	"428.3"	"0.7"	"468.7"	"465.5"	""	"892"	"55"	"36.000"	"29.000"	"0.000132841832752542"	"21"	"0"	"1.635E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENLLGSYFPK"	"[K].tENLLGSYFPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"863.99353"	"1726.97978"	"1726.97799"	"1.04"	"0.00090"	"7/108"	"7"	"108"	"1188012.61749268"	"HCD"	"MS2"	"0"	"106.3"	"100.000"	"61.0054"	"19310"	"19310"	"19289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.5"	""	"129.5"	""	"143.7"	""	"175.8"	"1.0"	"216.3"	"192.4"	""	"872"	"45"	"36.000"	"29.000"	"0.00137558201579134"	"22"	"0"	"1.943E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPGITLLNVSK"	"[R].nIPGITLLNVSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.36536"	"1727.08152"	"1727.08313"	"-0.93"	"-0.00054"	"8/120"	"8"	"120"	"15270836.5603027"	"HCD"	"MS2"	"10.1228"	"323.2"	"100.000"	"65.7900"	"21317"	"21317"	"21299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"442.0"	""	"442.0"	""	"452.9"	""	"542.6"	""	"614.5"	"571.7"	""	"227"	"51"	"30.000"	"23.000"	"9.31099002814344E-05"	"16"	"0"	"3.301E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPGITLLNVSK"	"[R].nIPGITLLNVSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.04449"	"1727.08171"	"1727.08313"	"-0.82"	"-0.00071"	"11/120"	"11"	"120"	"1407481.03778076"	"HCD"	"MS2"	"0"	"87.4"	"100.000"	"66.0273"	"21414"	"21414"	"21395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.9"	""	"109.4"	""	"144.9"	""	"142.1"	"2.1"	"164.3"	"156.0"	""	"227"	"67"	"30.000"	"23.000"	"2.34961043087783E-06"	"17"	"0"	"5.583E-06"	"1.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPGITLLNVSK"	"[R].nIPGITLLNVSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.04456"	"1727.08183"	"1727.08313"	"-0.75"	"-0.00065"	"19/120"	"19"	"120"	"1811582.76629639"	"HCD"	"MS2"	"2.315265"	"108.6"	"100.000"	"66.0929"	"21388"	"21388"	"21369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.8"	""	"154.6"	""	"146.8"	""	"180.8"	""	"209.7"	"195.4"	""	"227"	"59"	"30.000"	"23.000"	"1.36143170907454E-05"	"16"	"0"	"8.478E-06"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPGITLLNVSK"	"[R].nIPGITLLNVSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.04474"	"1727.08220"	"1727.08313"	"-0.54"	"-0.00046"	"11/120"	"11"	"120"	"2344336.35296631"	"HCD"	"MS2"	"0"	"135.4"	"100.000"	"65.7303"	"21293"	"21293"	"21267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.0"	""	"192.0"	""	"180.5"	""	"227.6"	"5.2"	"252.8"	"229.0"	""	"227"	"74"	"30.000"	"23.000"	"5.06985877091343E-07"	"17"	"0"	"8.084E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQALALQGDVK"	"[R].lIQALALQGDVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"864.04480"	"1727.08232"	"1727.08313"	"-0.47"	"-0.00040"	"14/106"	"14"	"106"	"365497.016174316"	"HCD"	"MS2"	"19.94214"	"34.8"	"100.000"	"64.2918"	"20706"	"20706"	"20675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.0"	""	"49.1"	""	"46.8"	""	"55.9"	""	"65.0"	"68.1"	""	"227"	"49"	"30.000"	"23.000"	"0.000156673614032427"	""	"0"	"9.472E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPGITLLNVSK"	"[R].nIPGITLLNVSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.36566"	"1727.08243"	"1727.08313"	"-0.40"	"-0.00023"	"8/120"	"8"	"120"	"10911158.2582397"	"HCD"	"MS2"	"13.85504"	"260.2"	"100.000"	"65.8237"	"21278"	"21278"	"21257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"324.3"	""	"336.3"	""	"357.5"	""	"466.2"	""	"505.1"	"482.9"	""	"227"	"47"	"30.000"	"23.000"	"0.00020940925007687"	"15"	"0"	"4.36E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQALALQGDVK"	"[R].lIQALALQGDVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"864.04572"	"1727.08415"	"1727.08313"	"0.59"	"0.00051"	"13/106"	"13"	"106"	"323257.962890625"	"HCD"	"MS2"	"53.06068"	"32.5"	"100.000"	"64.2728"	"20645"	"20645"	"20617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.4"	""	"42.8"	""	"38.6"	""	"55.4"	"1.9"	"56.4"	"61.9"	""	"223"	"45"	"30.000"	"23.000"	"0.000323798525972786"	""	"0.0001889"	"0.0006727"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPGITLLNVSK"	"[R].nIPGITLLNVSk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.04596"	"1727.08464"	"1727.08313"	"0.88"	"0.00076"	"15/120"	"15"	"120"	"1802455.38092041"	"HCD"	"MS2"	"0"	"107.2"	"100.000"	"65.7961"	"21267"	"21267"	"21241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.7"	""	"132.9"	""	"160.0"	""	"201.2"	""	"191.3"	"199.2"	""	"221"	"34"	"30.000"	"23.000"	"0.00476828579894681"	"15"	"0"	"9.034E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIQQYNSFVSLSV"	"[R].nIQQYNSFVSLSV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"0"	"2"	"2"	"0.9787"	"0.0000"	"1"	"1"	"1"	"864.46204"	"1727.91680"	"1727.91657"	"0.13"	"0.00011"	"7/116"	"7"	"116"	"151161.448242188"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"72.8734"	"24200"	"24200"	"24175"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"11.8"	""	"12.0"	""	"18.4"	""	"15.9"	"19.6"	""	"972"	"47"	"36.000"	"29.000"	"0.00100840796948309"	"16"	"0.0001889"	"0.0005294"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIQQYNSFVSLSV"	"[R].nIQQYNSFVSLSV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.46368"	"1727.92009"	"1727.91657"	"2.04"	"0.00176"	"4/116"	"4"	"116"	"146838.280090332"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"72.9790"	"24192"	"24192"	"24161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.1"	""	"11.8"	""	"11.8"	""	"18.8"	""	"21.0"	"13.5"	""	"969"	"12"	"36.000"	"29.000"	"3.41423791914583"	"13"	"0.002829"	"0.04718"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPPYTIVYFPVR"	"[-].mPPYTIVYFPVR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"864.47125"	"1727.93523"	"1727.93922"	"-2.31"	"-0.00199"	"8/88"	"8"	"88"	"1055767.1295166"	"HCD"	"MS2"	"14.25562"	"59.9"	"100.000"	"63.4083"	"20292"	"20292"	"20265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.8"	""	"82.3"	""	"80.8"	""	"112.2"	"0.5"	"118.7"	"99.8"	""	"954"	"25"	"36.000"	"29.000"	"0.149802264697896"	"15"	"0.0006037"	"0.004614"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.50836"	"1728.00945"	"1728.00560"	"2.22"	"0.00192"	"15/114"	"15"	"114"	"1255833.06030273"	"HCD"	"MS2"	"0"	"104.2"	"100.000"	"38.8094"	"10289"	"10289"	"10262"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.0"	""	"123.9"	""	"135.1"	""	"244.7"	""	"185.5"	"176.7"	""	"778"	"23"	"35.000"	"28.000"	"0.185758887452842"	"14"	"0.0001859"	"0.0003202"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDVLQAEVAALK"	"[K].iDVLQAEVAALk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62739"	"Rab-3A-interacting protein OS=Rattus norvegicus OX=10116 GN=Rab3ip PE=1 SV=1"	"Q62739"	"Rab-3A-interacting protein OS=Rattus norvegicus OX=10116 GN=Rab3ip PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"864.53741"	"1728.06755"	"1728.06714"	"0.24"	"0.00021"	"9/112"	"9"	"112"	"128582.897705078"	"HCD"	"MS2"	"15.86366"	"11.2"	"100.000"	"78.5201"	"26493"	"26493"	"26463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.1"	"1.9"	"11.7"	""	"15.0"	""	"21.8"	""	"23.8"	"23.4"	""	"349"	"20"	"32.000"	"25.000"	"0.16780134257795"	"14"	"0.0003146"	"0.001467"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FATYNPSTLEK"	"[K].fATYNPSTLEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"864.98157"	"1728.95586"	"1728.95726"	"-0.81"	"-0.00070"	"12/106"	"12"	"106"	"574795.204711914"	"HCD"	"MS2"	"0"	"54.3"	"100.000"	"46.5276"	"13427"	"13427"	"13400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.5"	""	"82.2"	""	"84.9"	""	"74.8"	"1.3"	"95.2"	"97.5"	""	"1041"	"36"	"37.000"	"30.000"	"0.0127767599061406"	"23"	"0.0001859"	"0.0003743"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FATYNPSTLEK"	"[K].fATYNPSTLEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"864.98187"	"1728.95647"	"1728.95726"	"-0.46"	"-0.00039"	"11/106"	"11"	"106"	"550948.681091309"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"46.8263"	"13597"	"13597"	"13570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.8"	""	"70.9"	""	"80.9"	""	"87.7"	""	"99.8"	"90.3"	""	"1031"	"32"	"37.000"	"30.000"	"0.0336688799889772"	"17"	"0.0001859"	"0.0003155"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLMDTLFNTK"	"[K].sTLMDTLFNTk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.99091"	"1728.95816"	"1728.96063"	"-1.43"	"-0.00082"	"10/102"	"10"	"102"	"4067800.64752197"	"HCD"	"MS2"	"19.2792"	"134.8"	"100.000"	"67.1343"	"21812"	"21812"	"21798"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"201.6"	""	"172.8"	""	"194.3"	""	"224.7"	""	"230.3"	"252.3"	""	"1024"	"34"	"37.000"	"30.000"	"0.0195555466670104"	"15"	"0.0001889"	"0.0006267"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLMDTLFNTK"	"[K].sTLMDTLFNTk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"864.98285"	"1728.95842"	"1728.96063"	"-1.28"	"-0.00110"	"10/102"	"10"	"102"	"1308165.07269287"	"HCD"	"MS2"	"0"	"120.8"	"100.000"	"67.3371"	"21940"	"21940"	"21925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.8"	""	"146.2"	""	"183.9"	""	"182.7"	""	"216.8"	"237.1"	""	"1017"	"78"	"37.000"	"30.000"	"8.41959026424255E-07"	"23"	"0"	"5.327E-06"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLMDTLFNTK"	"[K].sTLMDTLFNTk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"576.99127"	"1728.95926"	"1728.96063"	"-0.79"	"-0.00046"	"8/102"	"8"	"102"	"6105935.15380859"	"HCD"	"MS2"	"0"	"167.9"	"100.000"	"67.0712"	"21837"	"21837"	"21827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.0"	""	"219.6"	""	"229.6"	""	"282.1"	"1.5"	"318.2"	"320.9"	""	"1024"	"31"	"37.000"	"30.000"	"0.0377806965826099"	"18"	"0.0001889"	"0.0006118"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLMDTLFNTK"	"[K].sTLMDTLFNTk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"2"	"2"	"0.9324"	"0.0000"	"1"	"1"	"1"	"864.98352"	"1728.95976"	"1728.96063"	"-0.50"	"-0.00043"	"10/102"	"10"	"102"	"1287638.62579346"	"HCD"	"MS2"	"0"	"126.9"	"100.000"	"67.0418"	"21828"	"21828"	"21819"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.2"	""	"170.3"	""	"174.9"	""	"205.9"	""	"235.8"	"239.2"	""	"1028"	"74"	"37.000"	"30.000"	"2.24886362051341E-06"	"22"	"0"	"9.192E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLMDTLFNTK"	"[K].sTLMDTLFNTk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"864.98383"	"1728.96037"	"1728.96063"	"-0.15"	"-0.00013"	"17/102"	"17"	"102"	"1364970.53961182"	"HCD"	"MS2"	"100"	"137.5"	"100.000"	"67.1665"	"21825"	"21825"	"21810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"190.9"	""	"169.5"	""	"200.0"	""	"225.6"	""	"252.0"	"268.9"	""	"1023"	"45"	"37.000"	"30.000"	"0.00164757668674148"	"19"	"0"	"3.646E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLMDTLFNTK"	"[K].sTLMDTLFNTk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"864.98462"	"1728.96196"	"1728.96063"	"0.77"	"0.00067"	"14/102"	"14"	"102"	"938245.668640137"	"HCD"	"MS2"	"100"	"99.1"	"100.000"	"67.4737"	"21946"	"21946"	"21929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.7"	""	"137.2"	""	"141.5"	""	"158.6"	""	"173.8"	"199.3"	""	"1017"	"35"	"37.000"	"30.000"	"0.0179180587925105"	"19"	"0"	"0.000154"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVINPSGGLISK"	"[K].wVINPSGGLISk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"577.01801"	"1729.03946"	"1729.04126"	"-1.04"	"-0.00060"	"12/114"	"12"	"114"	"2469644.93481445"	"HCD"	"MS2"	"5.323323"	"72.5"	"100.000"	"63.2937"	"20298"	"20298"	"20275"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.5"	""	"81.7"	""	"106.3"	""	"116.9"	"1.1"	"127.4"	"138.1"	""	"615"	"45"	"34.000"	"27.000"	"0.000988200615631898"	"17"	"0"	"2.378E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVINPSGGLISK"	"[K].wVINPSGGLISk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"577.01849"	"1729.04093"	"1729.04126"	"-0.19"	"-0.00011"	"9/114"	"9"	"114"	"2422616.32855225"	"HCD"	"MS2"	"9.010932"	"70.9"	"100.000"	"63.1708"	"20195"	"20195"	"20169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.2"	""	"102.8"	""	"91.7"	""	"116.9"	"0.7"	"122.0"	"136.6"	""	"560"	"42"	"34.000"	"27.000"	"0.00167169880243474"	"16"	"0"	"2.628E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVMILTNPVAAK"	"[R].nVMILTNPVAAk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"3"	"3"	"0.9038"	"0.0000"	"1"	"1"	"1"	"577.01886"	"1729.04203"	"1729.04463"	"-1.51"	"-0.00087"	"12/110"	"12"	"110"	"3256733.59216309"	"HCD"	"MS2"	"23.90702"	"103.9"	"100.000"	"54.2242"	"16597"	"16597"	"16577"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.7"	""	"147.8"	""	"160.1"	""	"118.3"	"2.6"	"197.0"	"207.1"	""	"546"	"52"	"34.000"	"27.000"	"0.000182457889496232"	"20"	"0"	"2.801E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVMILTNPVAAK"	"[R].nVMILTNPVAAk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"3"	"3"	"0.9800"	"0.0000"	"1"	"1"	"1"	"577.01959"	"1729.04422"	"1729.04463"	"-0.24"	"-0.00014"	"12/110"	"12"	"110"	"3541408.70019531"	"HCD"	"MS2"	"35.7099"	"109.7"	"100.000"	"54.0890"	"16489"	"16489"	"16461"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.2"	""	"157.2"	""	"156.9"	""	"147.7"	"3.0"	"201.6"	"214.6"	""	"543"	"50"	"34.000"	"27.000"	"0.000270875567327824"	"16"	"0"	"3.566E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVMILTNPVAAK"	"[R].nVMILTNPVAAk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"865.02588"	"1729.04448"	"1729.04463"	"-0.09"	"-0.00008"	"9/110"	"9"	"110"	"639563.280639648"	"HCD"	"MS2"	"0"	"47.3"	"100.000"	"54.0500"	"16473"	"16473"	"16445"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.8"	""	"65.3"	""	"72.0"	""	"49.5"	"1.2"	"100.8"	"94.2"	""	"536"	"54"	"34.000"	"27.000"	"0.000105714556956175"	"25"	"0"	"3.114E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVMILTNPVAAK"	"[R].nVMILTNPVAAk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"865.02612"	"1729.04497"	"1729.04463"	"0.19"	"0.00017"	"12/110"	"12"	"110"	"687170.446228027"	"HCD"	"MS2"	"100"	"52.0"	"100.000"	"54.3091"	"16632"	"16632"	"16605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.2"	""	"67.7"	""	"67.5"	""	"56.8"	"1.5"	"113.6"	"109.5"	""	"534"	"41"	"34.000"	"27.000"	"0.00200683312702861"	"20"	"0"	"0.0001094"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDGAEGSWFQK"	"[R].fDGAEGSWFQk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"865.45044"	"1729.89360"	"1729.89499"	"-0.80"	"-0.00069"	"16/92"	"16"	"92"	"648524.969055176"	"HCD"	"MS2"	"0"	"73.4"	"100.000"	"57.9771"	"18132"	"18132"	"18101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.7"	""	"92.8"	""	"96.4"	""	"121.6"	""	"137.5"	"140.8"	""	"968"	"53"	"36.000"	"29.000"	"0.000218698277077462"	"17"	"0"	"1.689E-05"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDGAEGSWFQK"	"[R].fDGAEGSWFQk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"865.45117"	"1729.89507"	"1729.89499"	"0.04"	"0.00004"	"7/92"	"7"	"92"	"269908.047424316"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"57.8771"	"18037"	"18037"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.6"	""	"48.5"	""	"47.9"	""	"52.7"	"0.1"	"70.6"	"61.0"	""	"966"	"4"	"36.000"	"29.000"	"18.0279826215333"	"13"	"0.001217"	"0.01662"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESVFFAEAPFK"	"[K].eSVFFAEAPFk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"577.32306"	"1729.95462"	"1729.95653"	"-1.10"	"-0.00064"	"8/92"	"8"	"92"	"1822272.06665039"	"HCD"	"MS2"	"47.01162"	"59.3"	"100.000"	"65.3038"	"21119"	"21119"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.9"	""	"90.5"	""	"83.5"	""	"101.8"	""	"106.5"	"103.3"	""	"1064"	"26"	"37.000"	"30.000"	"0.148221646171104"	"21"	"0"	"0.0001162"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESVFFAEAPFK"	"[K].eSVFFAEAPFk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"577.32373"	"1729.95664"	"1729.95653"	"0.06"	"0.00004"	"5/92"	"5"	"92"	"1697159.85101318"	"HCD"	"MS2"	"43.33346"	"56.3"	"100.000"	"65.3371"	"21080"	"21080"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.8"	""	"77.3"	""	"76.2"	""	"100.8"	"1.9"	"93.7"	"103.3"	""	"1103"	"27"	"37.000"	"30.000"	"0.119273926583545"	"17"	"0"	"0.0001617"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVLVAYSALGSHR"	"[K].dIVLVAYSALGSHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"577.33136"	"1729.97953"	"1729.97983"	"-0.18"	"-0.00010"	"15/126"	"15"	"126"	"4739308.0536499"	"HCD"	"MS2"	"18.55462"	"72.1"	"100.000"	"60.1802"	"18973"	"18973"	"18953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.8"	""	"101.0"	""	"108.7"	""	"122.1"	""	"132.6"	"130.6"	""	"929"	"48"	"36.000"	"29.000"	"0.000781602101367232"	"29"	"0"	"1.904E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVLVAYSALGSHR"	"[K].dIVLVAYSALGSHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"577.33142"	"1729.97971"	"1729.97983"	"-0.07"	"-0.00004"	"15/126"	"15"	"126"	"5515865.01507568"	"HCD"	"MS2"	"20.04689"	"70.7"	"100.000"	"60.3156"	"19082"	"19082"	"19059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.0"	""	"100.6"	""	"89.7"	""	"115.6"	""	"125.8"	"146.5"	""	"929"	"75"	"36.000"	"29.000"	"1.39632244257081E-06"	""	"0"	"1.201E-06"	"1.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYLDMLNVYK"	"[R].iYLDMLNVYk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"865.49890"	"1729.99053"	"1729.99629"	"-3.33"	"-0.00288"	"7/78"	"7"	"78"	"630071.471313477"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"76.5991"	"25663"	"25663"	"25649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.8"	""	"69.1"	""	"84.2"	""	"79.8"	""	"98.8"	"101.8"	""	"866"	"48"	"36.000"	"29.000"	"0.000638980928908462"	"16"	"0"	"6.309E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYLDMLNVYK"	"[R].iYLDMLNVYk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"865.50049"	"1729.99370"	"1729.99629"	"-1.49"	"-0.00129"	"14/78"	"14"	"78"	"466160.277526855"	"HCD"	"MS2"	"0"	"40.5"	"100.000"	"76.6525"	"25733"	"25733"	"25722"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.3"	""	"62.4"	""	"64.1"	""	"65.7"	""	"63.2"	"67.7"	""	"899"	"38"	"36.000"	"29.000"	"0.00636399304090708"	"16"	"0"	"3.883E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLNPNMLSPK"	"[].lQLNPnmLSPk.[]"	"N-Term(TMT6plex); N6(Deamidated); M7(Oxidation); K11(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"4"	"577.33667"	"1729.99546"	"1729.99226"	"1.85"	"0.00106"	"3/98"	"3"	"98"	"267235.591003418"	"HCD"	"MS2"	"9.423672"	"11.1"	"100.000"	"85.0738"	"29165"	"29165"	"29138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.2"	""	"16.1"	""	"18.4"	""	"17.7"	""	"20.1"	"21.7"	""	"881"	"3"	"36.000"	"29.000"	"20.7465512277858"	"15"	"0.003818"	"0.09572"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLNPNMLSPK"	"[].lQLnPNmLSPk.[]"	"N-Term(TMT6plex); N4(Deamidated); M7(Oxidation); K11(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"3"	"5"	"577.33667"	"1729.99546"	"1729.99226"	"1.85"	"0.00106"	"3/98"	"3"	"98"	"267235.591003418"	"HCD"	"MS2"	"9.423672"	"11.1"	"100.000"	"85.0738"	"29165"	"29165"	"29138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.2"	""	"16.1"	""	"18.4"	""	"17.7"	""	"20.1"	"21.7"	""	"881"	"3"	"36.000"	"29.000"	"20.7465512277858"	"15"	"0.003818"	"0.09572"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLNPNMLSPK"	"[].lqLNPNmLSPk.[]"	"N-Term(TMT6plex); Q2(Deamidated); M7(Oxidation); K11(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"4"	"6"	"577.33667"	"1729.99546"	"1729.99226"	"1.85"	"0.00106"	"3/98"	"3"	"98"	"267235.591003418"	"HCD"	"MS2"	"9.423672"	"11.1"	"100.000"	"85.0738"	"29165"	"29165"	"29138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.2"	""	"16.1"	""	"18.4"	""	"17.7"	""	"20.1"	"21.7"	""	"881"	"3"	"36.000"	"29.000"	"20.7465512277858"	"15"	"0.003818"	"0.09572"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIATALEYVYK"	"[R].tIATALEYVYk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3ZKU7"	"Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Rattus norvegicus OX=10116 GN=Bloc1s1 PE=3 SV=1"	"D3ZKU7"	"Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Rattus norvegicus OX=10116 GN=Bloc1s1 PE=3 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"865.50897"	"1730.01067"	"1730.01404"	"-1.95"	"-0.00169"	"15/92"	"15"	"92"	"341122.739074707"	"HCD"	"MS2"	"20.54055"	"30.7"	"100.000"	"67.9276"	"22181"	"22181"	"22154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.2"	""	"44.3"	""	"42.4"	""	"47.1"	""	"55.9"	"62.6"	""	"745"	"57"	"35.000"	"28.000"	"7.9273179462856E-05"	"23"	"0"	"8.533E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIATALEYVYK"	"[R].tIATALEYVYk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D3ZKU7"	"Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Rattus norvegicus OX=10116 GN=Bloc1s1 PE=3 SV=1"	"D3ZKU7"	"Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Rattus norvegicus OX=10116 GN=Bloc1s1 PE=3 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"577.34363"	"1730.01633"	"1730.01404"	"1.32"	"0.00076"	"13/92"	"13"	"92"	"1174916.32440186"	"HCD"	"MS2"	"16.83223"	"46.0"	"100.000"	"67.9345"	"22184"	"22184"	"22154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.0"	""	"65.2"	""	"71.2"	""	"72.7"	"0.8"	"76.5"	"90.7"	""	"741"	"23"	"35.000"	"28.000"	"0.186117929418045"	"17"	"0.0001889"	"0.0006974"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHKPLDMSK"	"[R].sHkPLDMSk.[V]"	"N-Term(TMT6plex); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.34613"	"1730.02384"	"1730.02379"	"0.03"	"0.00002"	"6/90"	"6"	"90"	"5691183.32421875"	"HCD"	"MS2"	"21.16662"	"362.2"	"100.000"	"28.0598"	"5975"	"5975"	"5953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"769.2"	""	"565.1"	""	"424.4"	""	"536.9"	"2.3"	"637.7"	"486.2"	""	"747"	"12"	"35.000"	"28.000"	"2.4563520225225"	"13"	"0.0001859"	"0.0003656"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHKPLDMSK"	"[R].sHkPLDMSk.[V]"	"N-Term(TMT6plex); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.34662"	"1730.02530"	"1730.02379"	"0.88"	"0.00051"	"7/90"	"7"	"90"	"4526154.87469482"	"HCD"	"MS2"	"28.10066"	"328.7"	"100.000"	"27.9851"	"5910"	"5910"	"5884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"668.4"	""	"533.5"	""	"404.7"	""	"462.7"	""	"582.4"	"457.4"	""	"700"	"19"	"35.000"	"28.000"	"0.416934702809581"	"14"	"0.0001859"	"0.0003672"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLAVNMVPFPR"	"[R].kLAVNMVPFPR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.35632"	"1730.05442"	"1730.05514"	"-0.42"	"-0.00024"	"5/102"	"5"	"102"	"22664205.850647"	"HCD"	"MS2"	"14.68566"	"728.1"	"93.351"	"48.9556"	"14420"	"14420"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1536.8"	""	"1520.4"	""	"1539.3"	""	"578.6"	"2.1"	"781.8"	"885.0"	""	"523"	"32"	"34.000"	"27.000"	"0.0168838580892562"	"14"	"0"	"0.0001018"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLAVNMVPFPR"	"[R].kLAVNMVPFPR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.35687"	"1730.05606"	"1730.05514"	"0.54"	"0.00031"	"6/102"	"6"	"102"	"18770983.8490601"	"HCD"	"MS2"	"12.3381"	"625.2"	"100.000"	"49.2262"	"14578"	"14578"	"14558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1223.7"	""	"1228.1"	""	"1326.6"	""	"572.2"	""	"734.4"	"798.6"	""	"499"	"19"	"33.000"	"26.000"	"0.338119758381583"	"14"	"0"	"8.932E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPLIVFTPK"	"[R].kPLIVFTPk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.38928"	"1730.15329"	"1730.15472"	"-0.83"	"-0.00048"	"6/80"	"6"	"80"	"10742801.6044922"	"HCD"	"MS2"	"28.38911"	"394.0"	"100.000"	"47.0227"	"13629"	"13629"	"13608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"496.5"	""	"510.1"	""	"556.5"	""	"662.3"	""	"767.7"	"744.1"	""	"97"	"18"	"26.000"	"19.000"	"0.071736756826158"	"14"	"0"	"8.045E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPLIVFTPK"	"[R].kPLIVFTPk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.39001"	"1730.15549"	"1730.15472"	"0.44"	"0.00026"	"6/80"	"6"	"80"	"10132275.0446777"	"HCD"	"MS2"	"41.57415"	"398.5"	"100.000"	"47.2840"	"13784"	"13784"	"13762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"511.7"	""	"549.4"	""	"582.0"	""	"686.8"	""	"717.0"	"732.4"	""	"87"	"17"	"26.000"	"19.000"	"0.0921487093833099"	"14"	"0"	"0.0001698"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHSFYNELR"	"[K].iWHHSFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"577.63617"	"1730.89396"	"1730.89644"	"-1.44"	"-0.00083"	"10/94"	"10"	"94"	"6793316.84185791"	"HCD"	"MS2"	"4.966863"	"174.5"	"100.000"	"36.4755"	"9331"	"9331"	"9306"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.1"	""	"233.0"	""	"248.8"	""	"281.2"	"0.2"	"344.2"	"314.1"	""	"975"	"32"	"36.000"	"29.000"	"0.028312265354164"	"17"	"0"	"2.427E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHSFYNELR"	"[K].iWHHSFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"577.63660"	"1730.89524"	"1730.89644"	"-0.69"	"-0.00040"	"9/94"	"9"	"94"	"10976668.4698486"	"HCD"	"MS2"	"22.06478"	"190.8"	"84.089"	"36.5350"	"9399"	"9399"	"9369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"264.7"	""	"243.6"	""	"257.6"	""	"314.2"	""	"386.7"	"343.5"	""	"972"	"39"	"36.000"	"29.000"	"0.00633339054327818"	"18"	"0"	"7.427E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLDLISIWK"	"[R].lDGLDLISIWk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.02545"	"1731.04363"	"1731.04568"	"-1.19"	"-0.00103"	"4/92"	"4"	"92"	"109447.006958008"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"92.3883"	"31899"	"31899"	"31893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.2"	""	"2.4"	""	"6.5"	""	"13.3"	""	"7.3"	"12.7"	""	"665"	"10"	"35.000"	"28.000"	"3.48972857526897"	"13"	"0.00252"	"0.03864"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLDLISIWK"	"[R].lDGLDLISIWk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"577.68634"	"1731.04447"	"1731.04568"	"-0.70"	"-0.00040"	"10/92"	"10"	"92"	"254531.936523438"	"HCD"	"MS2"	"9.121166"	"7.8"	"100.000"	"92.4246"	"31908"	"31908"	"31904"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"8.8"	""	"8.8"	""	"15.3"	""	"15.5"	"17.4"	""	"659"	"34"	"35.000"	"28.000"	"0.0121298496815214"	"22"	"0.0001889"	"0.0004863"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLDLISIWK"	"[R].lDGLDLISIWk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.02643"	"1731.04558"	"1731.04568"	"-0.06"	"-0.00005"	"7/92"	"7"	"92"	"85540.7863769531"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"92.2384"	"31826"	"31826"	"31821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	"7.0"	""	"3.2"	""	"11.6"	""	"8.8"	"15.9"	""	"624"	"12"	"34.000"	"27.000"	"1.91053322218129"	"13"	"0.0008125"	"0.007715"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLDLISIWK"	"[R].lDGLDLISIWk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"577.68689"	"1731.04612"	"1731.04568"	"0.25"	"0.00015"	"10/92"	"10"	"92"	"180773.445800781"	"HCD"	"MS2"	"3.657877"	"7.0"	"100.000"	"92.2635"	"31833"	"31833"	"31828"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.3"	""	"8.6"	""	"7.0"	""	"13.4"	""	"14.5"	"17.1"	""	"598"	"35"	"34.000"	"27.000"	"0.0101547956504532"	"26"	"0.0001889"	"0.0003877"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPLSGLALPTLK"	"[R].yPLSGLALPTLk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQR2"	"Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus OX=10116 GN=Agps PE=2 SV=1"	"Q9EQR2"	"Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus OX=10116 GN=Agps PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"577.69794"	"1731.07926"	"1731.08206"	"-1.62"	"-0.00094"	"7/100"	"7"	"100"	"755549.09979248"	"HCD"	"MS2"	"4.470453"	"32.9"	"100.000"	"73.2677"	"24361"	"24361"	"24335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.2"	""	"43.0"	""	"43.9"	""	"54.9"	"0.2"	"60.3"	"70.0"	""	"372"	"22"	"32.000"	"25.000"	"0.124598537351474"	"25"	"0.0001859"	"0.0003697"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPLSGLALPTLK"	"[R].yPLSGLALPTLk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQR2"	"Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus OX=10116 GN=Agps PE=2 SV=1"	"Q9EQR2"	"Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus OX=10116 GN=Agps PE=2 SV=1"	"0"	"3"	"3"	"0.4333"	"0.0000"	"1"	"1"	"1"	"577.69830"	"1731.08036"	"1731.08206"	"-0.99"	"-0.00057"	"7/100"	"7"	"100"	"531907.241210938"	"HCD"	"MS2"	"6.664042"	"25.2"	"100.000"	"73.3598"	"24347"	"24347"	"24321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.3"	""	"35.3"	""	"34.3"	""	"45.0"	"0.3"	"41.1"	"50.2"	""	"368"	"30"	"32.000"	"25.000"	"0.0167424042164334"	""	"7.476E-05"	"0.0001898"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GATYAFSGSHYWR"	"[R].gATYAFSGSHYWR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.42462"	"1731.84197"	"1731.84407"	"-1.21"	"-0.00105"	"10/108"	"10"	"108"	"639270.188354492"	"HCD"	"MS2"	"0"	"42.1"	"100.000"	"37.6487"	"9856"	"9856"	"9825"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.1"	""	"86.5"	""	"63.0"	""	"58.2"	""	"63.1"	"53.4"	""	"566"	"46"	"34.000"	"27.000"	"0.000768752313081461"	"15"	"0"	"3.884E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GATYAFSGSHYWR"	"[R].gATYAFSGSHYWR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.95239"	"1731.84262"	"1731.84407"	"-0.83"	"-0.00048"	"17/108"	"17"	"108"	"45395812.3325195"	"HCD"	"MS2"	"5.233978"	"192.5"	"32.433"	"37.4707"	"9739"	"9739"	"9720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"335.0"	""	"324.8"	""	"274.4"	""	"301.5"	"2.4"	"302.9"	"276.7"	""	"574"	"43"	"34.000"	"27.000"	"0.00158811481344917"	"15"	"0"	"1.384E-05"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GATYAFSGSHYWR"	"[R].gATYAFSGSHYWR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.95288"	"1731.84409"	"1731.84407"	"0.01"	"0.00001"	"19/108"	"19"	"108"	"60363788.6877441"	"HCD"	"MS2"	"14.25332"	"144.7"	"23.563"	"37.5850"	"9829"	"9829"	"9809"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"230.9"	""	"281.8"	""	"214.9"	""	"221.6"	""	"207.6"	"209.6"	""	"577"	"50"	"34.000"	"27.000"	"0.000305594699713648"	"16"	"0"	"9.782E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLITAVAPGAFLGMK"	"[R].nLITAVAPGAFLGMK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.50171"	"1731.99614"	"1732.00288"	"-3.89"	"-0.00337"	"3/140"	"3"	"140"	"152198.807128906"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"84.6814"	"29005"	"29005"	"28984"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.1"	""	"4.8"	""	"4.7"	""	"4.6"	""	"6.1"	"8.0"	""	"971"	"4"	"36.000"	"29.000"	"20.4262778080648"	"13"	"0.007626"	"0.3026"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLITAVAPGAFLGMK"	"[R].nLITAVAPGAFLGMK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.50330"	"1731.99932"	"1732.00288"	"-2.06"	"-0.00178"	"3/140"	"3"	"140"	"179089.964538574"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"84.7075"	"28965"	"28965"	"28939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.0"	""	"6.5"	""	"6.8"	""	"5.9"	""	"7.9"	"10.8"	""	"933"	"2"	"36.000"	"29.000"	"28.23915180727"	"13"	"0.008737"	"0.3919"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVLFPSGTPLPAR"	"[R].fTVLFPSGTPLPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYB4"	"Heat shock 70 kDa protein 14 OS=Rattus norvegicus OX=10116 GN=Hspa14 PE=2 SV=1"	"Q6AYB4"	"Heat shock 70 kDa protein 14 OS=Rattus norvegicus OX=10116 GN=Hspa14 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.50604"	"1732.00481"	"1731.99951"	"3.06"	"0.00265"	"9/118"	"9"	"118"	"282582.823364258"	"HCD"	"MS2"	"21.28762"	"22.2"	"100.000"	"70.2033"	"23110"	"23110"	"23082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.3"	""	"30.8"	""	"25.3"	""	"39.4"	""	"42.0"	"45.6"	""	"917"	"14"	"36.000"	"29.000"	"1.68011627976032"	"13"	"0.000523"	"0.003087"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVLFPSGTPLPAR"	"[R].fTVLFPSGTPLPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYB4"	"Heat shock 70 kDa protein 14 OS=Rattus norvegicus OX=10116 GN=Hspa14 PE=2 SV=1"	"Q6AYB4"	"Heat shock 70 kDa protein 14 OS=Rattus norvegicus OX=10116 GN=Hspa14 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.50702"	"1732.00676"	"1731.99951"	"4.19"	"0.00363"	"9/118"	"9"	"118"	"404358.838317871"	"HCD"	"MS2"	"50.8345"	"28.6"	"100.000"	"70.2348"	"23071"	"23071"	"23043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.5"	""	"37.9"	""	"39.5"	""	"46.6"	""	"51.2"	"56.5"	""	"910"	"27"	"36.000"	"29.000"	"0.0935430221172785"	"14"	"0.0001889"	"0.000844"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFQVPMSVPK"	"[K].qLFQVPMSVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"866.51117"	"1732.01506"	"1732.02317"	"-4.68"	"-0.00405"	"8/100"	"8"	"100"	"348213.276245117"	"HCD"	"MS2"	"100"	"26.1"	"100.000"	"62.7642"	"20082"	"20082"	"20051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.9"	""	"40.3"	""	"29.9"	""	"35.8"	""	"52.1"	"48.4"	""	"822"	"14"	"36.000"	"29.000"	"1.46839136480443"	"15"	"0.0007793"	"0.007382"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFQVPMSVPK"	"[K].qLFQVPMSVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"578.01233"	"1732.02243"	"1732.02317"	"-0.42"	"-0.00025"	"5/100"	"5"	"100"	"2652706.82232666"	"HCD"	"MS2"	"40.25374"	"94.2"	"100.000"	"62.7182"	"20063"	"20063"	"20035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.4"	""	"128.0"	""	"148.2"	""	"125.9"	"0.4"	"157.0"	"184.4"	""	"778"	"15"	"35.000"	"28.000"	"1.38022408411861"	"20"	"0.0001859"	"0.0003154"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFQVPMSVPK"	"[K].qLFQVPMSVPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"578.01318"	"1732.02500"	"1732.02317"	"1.06"	"0.00061"	"5/100"	"5"	"100"	"2168685.08673096"	"HCD"	"MS2"	"29.5536"	"90.9"	"100.000"	"62.5814"	"19954"	"19954"	"19929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.6"	""	"134.9"	""	"122.0"	""	"128.2"	"0.5"	"161.8"	"173.0"	""	"742"	"18"	"35.000"	"28.000"	"0.627153585639651"	"17"	"0.0001889"	"0.0006902"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVFASLPQVER"	"[K].kVFASLPQVER.[G]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"5"	"578.02179"	"1732.05082"	"1732.05216"	"-0.78"	"-0.00045"	"13/110"	"13"	"110"	"11386296.9783325"	"HCD"	"MS2"	"30.64478"	"528.1"	"100.000"	"40.7220"	"11070"	"11070"	"11045"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"670.5"	""	"608.6"	""	"619.8"	""	"909.1"	"4.0"	"1090.0"	"1113.4"	""	"547"	"2"	"34.000"	"27.000"	"17.1378891987884"	"13"	"0.0001889"	"0.0008655"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLDKLDVK"	"[K].lTLDkLDVk.[G]"	"N-Term(TMT6plex); K5(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.04376"	"1732.11673"	"1732.11873"	"-1.15"	"-0.00067"	"7/82"	"7"	"82"	"12568930.1395874"	"HCD"	"MS2"	"18.87302"	"731.0"	"100.000"	"48.2200"	"14119"	"14119"	"14096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1943.1"	""	"1494.5"	""	"1368.8"	""	"698.3"	""	"618.2"	"732.6"	""	"192"	"1"	"29.000"	"22.000"	"8.28459405856291"	"13"	"0.000523"	"0.003108"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLEATELK"	"[K].kLLEATELk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"578.04419"	"1732.11802"	"1732.11873"	"-0.41"	"-0.00024"	"11/86"	"11"	"86"	"24512261.4370117"	"HCD"	"MS2"	"40.10469"	"539.6"	"35.800"	"41.7034"	"11472"	"11472"	"11451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"743.3"	""	"782.6"	""	"770.5"	""	"711.1"	""	"958.3"	"1157.7"	""	"177"	"12"	"29.000"	"22.000"	"0.579353014049539"	"14"	"0.0001889"	"0.0005248"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFEDFVTMTASR"	"[R].lSFEDFVTMTASR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z8"	"Peflin OS=Rattus norvegicus OX=10116 GN=Pef1 PE=2 SV=1"	"Q641Z8"	"Peflin OS=Rattus norvegicus OX=10116 GN=Pef1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.29657"	"1732.87516"	"1732.87774"	"-1.49"	"-0.00086"	"11/116"	"11"	"116"	"457240.333618164"	"HCD"	"MS2"	"16.76558"	"16.4"	"100.000"	"75.7495"	"25374"	"25374"	"25343"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.2"	""	"17.2"	""	"23.5"	""	"30.7"	""	"34.0"	"31.6"	""	"815"	"26"	"36.000"	"29.000"	"0.0935680574105788"	"14"	"0"	"0.000147"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSVLYQYTDGK"	"[K].tSVLYQYTDGk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P23640"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1"	"P23640"	"Ras-related protein Rab-27A OS=Rattus norvegicus OX=10116 GN=Rab27a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.97919"	"1732.95110"	"1732.95217"	"-0.62"	"-0.00054"	"10/106"	"10"	"106"	"192012.461791992"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"45.1383"	"12863"	"12863"	"12832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.1"	""	"27.4"	""	"20.8"	""	"31.9"	""	"32.8"	"35.6"	""	"1213"	"34"	"37.000"	"30.000"	"0.0238139153319857"	"15"	"0.0001859"	"0.0003389"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFATSLYSMIK"	"[K].nFATSLYSMIk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"866.98749"	"1732.96770"	"1732.97080"	"-1.79"	"-0.00155"	"10/108"	"10"	"108"	"1816530.82202148"	"HCD"	"MS2"	"13.3194"	"152.4"	"100.000"	"71.7841"	"23703"	"23703"	"23683"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.2"	""	"190.2"	""	"233.1"	""	"258.9"	""	"275.4"	"306.5"	""	"1172"	"57"	"37.000"	"30.000"	"0.000112952959912989"	"20"	"0"	"6.177E-06"	"1.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFATSLYSMIK"	"[K].nFATSLYSMIk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"866.98767"	"1732.96807"	"1732.97080"	"-1.58"	"-0.00137"	"10/108"	"10"	"108"	"1848448.50970459"	"HCD"	"MS2"	"6.600649"	"150.8"	"100.000"	"71.7041"	"23723"	"23723"	"23706"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.5"	""	"178.7"	""	"225.7"	""	"263.5"	"2.7"	"270.3"	"308.1"	""	"1164"	"56"	"37.000"	"30.000"	"0.000149597034557148"	"23"	"0"	"7.083E-06"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFATSLYSMIK"	"[K].nFATSLYSMIk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"578.32776"	"1732.96872"	"1732.97080"	"-1.20"	"-0.00069"	"13/108"	"13"	"108"	"6712781.79345703"	"HCD"	"MS2"	"10.63749"	"177.3"	"100.000"	"71.3976"	"23597"	"23597"	"23578"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"235.5"	""	"251.3"	""	"286.3"	""	"272.9"	"1.0"	"296.5"	"334.7"	""	"1155"	"43"	"37.000"	"30.000"	"0.0027198940599424"	"22"	"0"	"4.406E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFATSLYSMIK"	"[K].nFATSLYSMIk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"866.98810"	"1732.96892"	"1732.97080"	"-1.08"	"-0.00094"	"10/108"	"10"	"108"	"1954851.65167236"	"HCD"	"MS2"	"0"	"165.1"	"100.000"	"71.4023"	"23599"	"23599"	"23578"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"243.8"	""	"227.2"	""	"284.7"	""	"241.7"	"4.4"	"261.5"	"297.8"	""	"1153"	"61"	"37.000"	"30.000"	"4.86182487851104E-05"	"27"	"0"	"7.781E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFATSLYSMIK"	"[K].nFATSLYSMIk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"866.98859"	"1732.96990"	"1732.97080"	"-0.52"	"-0.00045"	"10/108"	"10"	"108"	"1723065.79693604"	"HCD"	"MS2"	"0"	"150.4"	"100.000"	"71.4731"	"23576"	"23576"	"23555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.7"	""	"196.5"	""	"249.4"	""	"229.3"	"2.2"	"230.5"	"304.7"	""	"1134"	"64"	"37.000"	"30.000"	"2.45800668045729E-05"	"18"	"0"	"3.889E-06"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFATSLYSMIK"	"[K].nFATSLYSMIk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"578.32819"	"1732.97000"	"1732.97080"	"-0.46"	"-0.00026"	"9/108"	"9"	"108"	"10596183.5280762"	"HCD"	"MS2"	"4.469145"	"255.9"	"100.000"	"71.5444"	"23605"	"23605"	"23587"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"345.1"	""	"347.8"	""	"409.0"	""	"413.1"	"2.1"	"415.4"	"490.1"	""	"1141"	"55"	"37.000"	"30.000"	"0.000192865989055512"	"22"	"0"	"1.517E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVLPDSDKK"	"[K].gSVLPDSDkk.[A]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.35168"	"1733.04050"	"1733.04121"	"-0.41"	"-0.00024"	"11/86"	"11"	"86"	"4559774.07965088"	"HCD"	"MS2"	"13.69159"	"304.3"	"100.000"	"31.9842"	"7502"	"7502"	"7474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"448.7"	""	"343.4"	""	"357.9"	""	"558.1"	""	"568.1"	"615.5"	""	"647"	"11"	"35.000"	"28.000"	"2.75343155358469"	"13"	"0.0001889"	"0.0009446"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVLPDSDKK"	"[K].gSVLPDSDkk.[A]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.35181"	"1733.04087"	"1733.04121"	"-0.20"	"-0.00011"	"10/86"	"10"	"86"	"3235253.59197998"	"HCD"	"MS2"	"9.525909"	"241.4"	"100.000"	"32.1349"	"7606"	"7606"	"7578"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"348.7"	""	"278.2"	""	"260.7"	""	"464.7"	"1.9"	"461.1"	"474.5"	""	"641"	"8"	"35.000"	"28.000"	"4.66474635326521"	"13"	"0.0007076"	"0.006822"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYHNVGLSK"	"[K].kYHNVGLSk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.35950"	"1733.06394"	"1733.06770"	"-2.17"	"-0.00125"	"7/80"	"7"	"80"	"1682999.22747803"	"HCD"	"MS2"	"0"	"120.0"	"100.000"	"28.1546"	"5979"	"5979"	"5964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"188.3"	""	"141.1"	""	"155.3"	""	"214.1"	"0.7"	"219.4"	"218.2"	""	"481"	"16"	"33.000"	"26.000"	"0.668521040896109"	"14"	"0.0001889"	"0.0003793"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYHNVGLSK"	"[K].kYHNVGLSk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.35950"	"1733.06394"	"1733.06770"	"-2.17"	"-0.00125"	"8/80"	"8"	"80"	"2222092.67425537"	"HCD"	"MS2"	"26.2659"	"148.8"	"100.000"	"28.2178"	"6040"	"6040"	"6017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"233.1"	""	"184.5"	""	"174.1"	""	"258.4"	"0.5"	"282.8"	"277.0"	""	"481"	"22"	"33.000"	"26.000"	"0.152797089110344"	"14"	"0"	"8.429E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILPHVDVQLK"	"[K].lILPHVDVQLk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9800"	"0.0000"	"1"	"1"	"1"	"578.37415"	"1733.10788"	"1733.10895"	"-0.61"	"-0.00035"	"7/84"	"7"	"84"	"9845134.44628906"	"HCD"	"MS2"	"7.421236"	"220.5"	"83.837"	"59.4665"	"18682"	"18682"	"18665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"323.8"	""	"334.1"	""	"328.8"	""	"325.1"	""	"360.9"	"413.7"	""	"215"	"50"	"30.000"	"23.000"	"0.000101020255885699"	"17"	"0"	"1.464E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILPHVDVQLK"	"[K].lILPHVDVQLk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"434.03244"	"1733.10793"	"1733.10895"	"-0.59"	"-0.00025"	"5/84"	"5"	"84"	"2513369.73736572"	"HCD"	"MS2"	"34.5864"	"88.3"	"100.000"	"59.3787"	"18646"	"18646"	"18617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"126.1"	""	"138.4"	""	"142.4"	""	"116.8"	""	"143.3"	"169.8"	""	"215"	"13"	"30.000"	"23.000"	"0.550057973205831"	"13"	"0.0006037"	"0.00426"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILPHVDVQLK"	"[K].lILPHVDVQLk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"578.37427"	"1733.10825"	"1733.10895"	"-0.40"	"-0.00023"	"7/84"	"7"	"84"	"10239520.7229614"	"HCD"	"MS2"	"5.235216"	"214.4"	"75.239"	"59.6000"	"18790"	"18790"	"18773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"304.2"	""	"318.5"	""	"324.3"	""	"308.5"	""	"366.0"	"409.8"	""	"215"	"53"	"30.000"	"23.000"	"4.86864898396393E-05"	"18"	"0"	"2.707E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILPHVDVQLK"	"[K].lILPHVDVQLk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"578.37427"	"1733.10825"	"1733.10895"	"-0.40"	"-0.00023"	"7/84"	"7"	"84"	"11385906.447937"	"HCD"	"MS2"	"11.09915"	"292.7"	"100.000"	"59.3045"	"18669"	"18669"	"18645"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"437.1"	""	"445.9"	""	"451.3"	""	"438.2"	"0.4"	"468.0"	"528.0"	""	"215"	"51"	"30.000"	"23.000"	"9.12869010664037E-05"	"23"	"0"	"8.98E-06"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILPHVDVQLK"	"[K].lILPHVDVQLk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"578.37445"	"1733.10880"	"1733.10895"	"-0.09"	"-0.00005"	"7/84"	"7"	"84"	"10513202.833313"	"HCD"	"MS2"	"13.19049"	"293.9"	"100.000"	"59.1685"	"18560"	"18560"	"18537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.3"	""	"446.8"	""	"460.1"	""	"443.6"	"2.9"	"476.2"	"516.3"	""	"215"	"53"	"30.000"	"23.000"	"4.97059598004205E-05"	"18"	"0"	"9.801E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFATSLYSMIK"	"[K].nFATSLYSMIk.[G]"	"N-Term(TMT6plex); N1(Deamidated); K11(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"578.65570"	"1733.95255"	"1733.95482"	"-1.31"	"-0.00076"	"10/108"	"10"	"108"	"534242.992736816"	"HCD"	"MS2"	"19.62184"	"19.1"	"100.000"	"80.5508"	"27321"	"27321"	"27295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.9"	""	"20.2"	""	"27.0"	""	"30.7"	"0.6"	"41.5"	"39.8"	""	"1183"	"31"	"37.000"	"30.000"	"0.0439495820065899"	"16"	"0"	"0.0001102"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFATSLYSMIK"	"[K].nFATSLYSMIk.[G]"	"N-Term(TMT6plex); N1(Deamidated); K11(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"578.65619"	"1733.95401"	"1733.95482"	"-0.46"	"-0.00027"	"8/108"	"8"	"108"	"532774.879699707"	"HCD"	"MS2"	"4.680638"	"22.0"	"100.000"	"80.5495"	"27269"	"27269"	"27249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.8"	""	"29.7"	""	"25.4"	""	"34.4"	""	"47.8"	"47.7"	""	"1150"	"20"	"37.000"	"30.000"	"0.513650653146645"	"16"	"0.0001859"	"0.0003711"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNASDALDK"	"[R].eLISNASDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2;Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2; Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8352"	"0.0000"	"1"	"1"	"1"	"867.48798"	"1733.96868"	"1733.96855"	"0.07"	"0.00006"	"11/122"	"11"	"122"	"1068737.77026367"	"HCD"	"MS2"	"0"	"84.6"	"100.000"	"46.7901"	"13534"	"13534"	"13512"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.8"	""	"88.0"	""	"110.9"	""	"138.4"	"0.8"	"147.6"	"160.7"	""	"1069"	"91"	"37.000"	"30.000"	"4.66603196403446E-08"	""	"0"	"5.533E-07"	"1.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNASDALDK"	"[R].eLISNASDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2;Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2; Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8602"	"0.0000"	"1"	"1"	"1"	"867.48810"	"1733.96892"	"1733.96855"	"0.21"	"0.00018"	"11/122"	"11"	"122"	"1146867.09411621"	"HCD"	"MS2"	"0"	"89.4"	"100.000"	"47.0676"	"13696"	"13696"	"13666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.3"	""	"104.9"	""	"118.0"	""	"138.8"	""	"169.2"	"169.0"	""	"1069"	"93"	"37.000"	"30.000"	"2.50004433018008E-08"	""	"0"	"6.211E-07"	"1.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIGGDDLSTLTGK"	"[K].vIGGDDLSTLTGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"578.67249"	"1734.00290"	"1734.00494"	"-1.17"	"-0.00068"	"14/108"	"14"	"108"	"6290705.51208496"	"HCD"	"MS2"	"7.326909"	"197.4"	"100.000"	"56.4725"	"17517"	"17517"	"17493"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.1"	""	"267.7"	""	"299.8"	""	"310.4"	""	"362.1"	"339.1"	""	"959"	"41"	"36.000"	"29.000"	"0.00370500340553389"	"22"	"0"	"5.266E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIGGDDLSTLTGK"	"[K].vIGGDDLSTLTGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7759"	"0.0000"	"1"	"1"	"1"	"867.50549"	"1734.00371"	"1734.00494"	"-0.71"	"-0.00061"	"19/108"	"19"	"108"	"2291160.93218994"	"HCD"	"MS2"	"0"	"178.0"	"100.000"	"56.5071"	"17531"	"17531"	"17509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.0"	""	"254.6"	""	"250.4"	""	"284.9"	""	"329.5"	"292.8"	""	"925"	"58"	"36.000"	"29.000"	"7.78236753245091E-05"	"29"	"0"	"1.035E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIGGDDLSTLTGK"	"[K].vIGGDDLSTLTGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"578.67310"	"1734.00473"	"1734.00494"	"-0.12"	"-0.00007"	"15/108"	"15"	"108"	"6506397.64886475"	"HCD"	"MS2"	"12.71312"	"195.5"	"100.000"	"56.2694"	"17380"	"17380"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"305.5"	""	"245.1"	""	"274.4"	""	"324.2"	"4.3"	"359.3"	"338.4"	""	"911"	"46"	"36.000"	"29.000"	"0.00126034191948494"	"23"	"0"	"4.1E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIGGDDLSTLTGK"	"[K].vIGGDDLSTLTGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"867.50653"	"1734.00578"	"1734.00494"	"0.49"	"0.00042"	"21/108"	"21"	"108"	"1936616.43286133"	"HCD"	"MS2"	"0"	"151.3"	"100.000"	"56.2809"	"17385"	"17385"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.4"	""	"217.9"	""	"200.3"	""	"255.3"	""	"254.4"	"272.3"	""	"909"	"94"	"36.000"	"29.000"	"1.61634434289604E-08"	""	"0"	"5.38E-07"	"1.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVSQISVLSGGK"	"[K].nSVSQISVLSGGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"578.67633"	"1734.01444"	"1734.01617"	"-1.00"	"-0.00058"	"13/136"	"13"	"136"	"8949132.54827881"	"HCD"	"MS2"	"39.71613"	"366.9"	"95.418"	"42.2418"	"11690"	"11690"	"11660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.1"	""	"318.7"	""	"350.9"	""	"402.9"	""	"1648.9"	"471.0"	""	"831"	"46"	"36.000"	"29.000"	"0.00117103810794038"	"24"	"0"	"1.475E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVSQISVLSGGK"	"[K].nSVSQISVLSGGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.9359"	"0.0000"	"1"	"1"	"1"	"867.51117"	"1734.01506"	"1734.01617"	"-0.64"	"-0.00055"	"21/136"	"21"	"136"	"806088.707214355"	"HCD"	"MS2"	"0"	"65.8"	"100.000"	"42.3224"	"11723"	"11723"	"11692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.6"	""	"79.0"	""	"80.0"	""	"121.2"	""	"141.8"	"124.1"	""	"827"	"78"	"36.000"	"29.000"	"6.41912028617666E-07"	"22"	"0"	"9.056E-07"	"1.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVSQISVLSGGK"	"[K].nSVSQISVLSGGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.8925"	"0.0000"	"1"	"1"	"1"	"867.51123"	"1734.01518"	"1734.01617"	"-0.57"	"-0.00049"	"11/136"	"11"	"136"	"1267452.6149292"	"HCD"	"MS2"	"0"	"93.9"	"100.000"	"42.5008"	"11840"	"11840"	"11811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.3"	""	"128.9"	""	"123.2"	""	"165.5"	"0.7"	"189.1"	"166.4"	""	"826"	"93"	"36.000"	"29.000"	"2.11324598078147E-08"	"28"	"0"	"8.739E-07"	"1.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQDAFLAIDAK"	"[K].aLQDAFLAIDAk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"F1LNI5"	"Protein phosphatase 1G OS=Rattus norvegicus OX=10116 GN=Ppm1g PE=1 SV=2"	"F1LNI5"	"Protein phosphatase 1G OS=Rattus norvegicus OX=10116 GN=Ppm1g PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"578.67834"	"1734.02048"	"1734.02019"	"0.17"	"0.00010"	"12/118"	"12"	"118"	"4180088.09533691"	"HCD"	"MS2"	"26.49339"	"102.1"	"100.000"	"70.6063"	"23222"	"23222"	"23203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.1"	""	"115.2"	""	"113.7"	""	"178.7"	"1.0"	"222.3"	"208.4"	""	"804"	"18"	"36.000"	"29.000"	"0.654977005121168"	"18"	"0"	"0.0001557"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQDAFLAIDAK"	"[K].aLQDAFLAIDAk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"F1LNI5"	"Protein phosphatase 1G OS=Rattus norvegicus OX=10116 GN=Ppm1g PE=1 SV=2"	"F1LNI5"	"Protein phosphatase 1G OS=Rattus norvegicus OX=10116 GN=Ppm1g PE=1 SV=2"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"578.67865"	"1734.02140"	"1734.02019"	"0.69"	"0.00040"	"12/118"	"12"	"118"	"4298124.94824219"	"HCD"	"MS2"	"25.31839"	"107.9"	"100.000"	"70.5081"	"23234"	"23234"	"23210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.7"	""	"129.7"	""	"121.6"	""	"188.4"	"0.3"	"232.8"	"210.8"	""	"782"	"17"	"35.000"	"28.000"	"0.803853223029799"	"18"	"0"	"0.0001392"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLADQGQSWK"	"[R].mLLADQGQSWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8406"	"0.0000"	"1"	"1"	"1"	"867.98364"	"1734.96001"	"1734.96130"	"-0.74"	"-0.00064"	"10/98"	"10"	"98"	"3938553.82806396"	"HCD"	"MS2"	"0"	"300.4"	"100.000"	"52.3978"	"15868"	"15868"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"349.1"	""	"318.9"	""	"337.7"	""	"467.5"	"7.2"	"689.9"	"688.0"	""	"1122"	"69"	"37.000"	"30.000"	"6.38208907346946E-06"	"28"	"0"	"1.162E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLADQGQSWK"	"[R].mLLADQGQSWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"867.98401"	"1734.96074"	"1734.96130"	"-0.32"	"-0.00028"	"10/98"	"10"	"98"	"1327919.07873535"	"HCD"	"MS2"	"0"	"108.6"	"100.000"	"52.7036"	"15993"	"15993"	"15974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.2"	""	"117.2"	""	"134.5"	""	"166.9"	"2.8"	"227.9"	"247.8"	""	"1133"	"60"	"37.000"	"30.000"	"5.3358045643019E-05"	"22"	"0"	"1.02E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLADQGQSWK"	"[R].mLLADQGQSWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"3"	"3"	"0.7736"	"0.0000"	"1"	"1"	"1"	"578.99182"	"1734.96091"	"1734.96130"	"-0.22"	"-0.00013"	"8/98"	"8"	"98"	"14986928.8752441"	"HCD"	"MS2"	"3.919051"	"392.3"	"96.898"	"52.3122"	"15783"	"15783"	"15762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"465.9"	""	"416.6"	""	"465.7"	""	"597.0"	"8.1"	"870.2"	"908.1"	""	"1133"	"53"	"37.000"	"30.000"	"0.000302134218293738"	"28"	"0"	"6.232E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLADQGQSWK"	"[R].mLLADQGQSWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8289"	"0.0000"	"1"	"1"	"1"	"867.98413"	"1734.96099"	"1734.96130"	"-0.18"	"-0.00016"	"10/98"	"10"	"98"	"3561533.65911865"	"HCD"	"MS2"	"0"	"286.1"	"100.000"	"52.1951"	"15735"	"15735"	"15714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"326.0"	""	"310.3"	""	"317.0"	""	"447.3"	"5.5"	"677.3"	"639.9"	""	"1133"	"76"	"37.000"	"30.000"	"1.58927815589965E-06"	"30"	"0"	"7.126E-06"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLADQGQSWK"	"[R].mLLADQGQSWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"578.99219"	"1734.96201"	"1734.96130"	"0.41"	"0.00024"	"8/98"	"8"	"98"	"15450651.5903931"	"HCD"	"MS2"	"4.093821"	"366.3"	"90.820"	"52.4718"	"15898"	"15898"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"447.7"	""	"389.1"	""	"428.5"	""	"557.8"	""	"838.8"	"822.8"	""	"1110"	"55"	"37.000"	"30.000"	"0.000169548121783461"	"30"	"0"	"6.646E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLADQGQSWK"	"[R].mLLADQGQSWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9067"	"0.0000"	"1"	"1"	"1"	"867.98486"	"1734.96245"	"1734.96130"	"0.66"	"0.00058"	"10/98"	"10"	"98"	"1374063.77081299"	"HCD"	"MS2"	"2.527374"	"110.3"	"100.000"	"52.5102"	"15864"	"15864"	"15842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.9"	""	"119.7"	""	"127.5"	""	"152.2"	"3.1"	"256.9"	"261.4"	""	"1096"	"75"	"37.000"	"30.000"	"1.75299452011088E-06"	"24"	"0"	"2.819E-06"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFPVQMEGVK"	"[K].eLFPVQMEGVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q75Q40"	"Mitochondrial import receptor subunit TOM40 homolog OS=Rattus norvegicus OX=10116 GN=Tomm40 PE=1 SV=1"	"Q75Q40"	"Mitochondrial import receptor subunit TOM40 homolog OS=Rattus norvegicus OX=10116 GN=Tomm40 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"578.99530"	"1734.97135"	"1734.98645"	"-8.70"	"-0.00503"	"10/104"	"10"	"104"	"1856858.15100098"	"HCD"	"MS2"	"11.3664"	"91.2"	"100.000"	"60.1198"	"18949"	"18949"	"18921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.4"	""	"118.5"	""	"126.1"	""	"144.5"	""	"173.5"	"200.8"	""	"1074"	"7"	"37.000"	"30.000"	"11.1679712097468"	"14"	"0.00162"	"0.02212"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSTWEGIQAGK"	"[K].lSSTWEGIQAGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"867.99133"	"1734.97539"	"1734.97906"	"-2.11"	"-0.00183"	"16/102"	"16"	"102"	"2071508.80651855"	"HCD"	"MS2"	"0"	"165.0"	"100.000"	"49.0514"	"14507"	"14507"	"14479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.9"	""	"249.9"	""	"248.2"	""	"250.6"	"2.0"	"255.3"	"271.6"	""	"1103"	"60"	"37.000"	"30.000"	"5.56602966671291E-05"	"21"	"0"	"3.462E-06"	"1.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSTWEGIQAGK"	"[K].lSSTWEGIQAGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8841"	"0.0000"	"1"	"1"	"1"	"867.99200"	"1734.97673"	"1734.97906"	"-1.34"	"-0.00116"	"11/102"	"11"	"102"	"1892398.1675415"	"HCD"	"MS2"	"0"	"165.1"	"100.000"	"48.7416"	"14333"	"14333"	"14303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.6"	""	"237.2"	""	"229.0"	""	"243.2"	"1.7"	"291.6"	"284.6"	""	"1095"	"69"	"37.000"	"30.000"	"7.47109267282435E-06"	"25"	"0"	"2.438E-06"	"1.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSTWEGIQAGK"	"[K].lSSTWEGIQAGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"578.99756"	"1734.97812"	"1734.97906"	"-0.54"	"-0.00031"	"9/102"	"9"	"102"	"9060376.76647949"	"HCD"	"MS2"	"18.18648"	"288.4"	"100.000"	"49.0076"	"14489"	"14489"	"14463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"429.2"	""	"399.5"	""	"374.5"	""	"462.7"	""	"535.8"	"530.5"	""	"1094"	"22"	"37.000"	"30.000"	"0.321356675833788"	"20"	"0.0001889"	"0.0005345"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSSTWEGIQAGK"	"[K].lSSTWEGIQAGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"578.99817"	"1734.97995"	"1734.97906"	"0.52"	"0.00030"	"11/102"	"11"	"102"	"7590705.13842773"	"HCD"	"MS2"	"36.70369"	"273.2"	"100.000"	"48.7050"	"14318"	"14318"	"14287"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"410.1"	""	"366.5"	""	"391.2"	""	"421.9"	"3.7"	"509.4"	"484.5"	""	"1052"	"26"	"37.000"	"30.000"	"0.135202818173642"	"20"	"0.0001308"	"0.0002245"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPSIFESLQK"	"[K].lDPSIFESLQk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"579.00580"	"1735.00284"	"1735.00421"	"-0.79"	"-0.00046"	"7/94"	"7"	"94"	"2966467.08135986"	"HCD"	"MS2"	"11.64412"	"75.7"	"100.000"	"71.2988"	"23557"	"23557"	"23530"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.6"	""	"85.5"	""	"92.6"	""	"134.3"	""	"152.6"	"152.1"	""	"881"	"25"	"36.000"	"29.000"	"0.148917560348735"	"20"	"0.0001308"	"0.0002371"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPSIFESLQK"	"[K].lDPSIFESLQk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"579.00635"	"1735.00449"	"1735.00421"	"0.16"	"0.00009"	"14/94"	"14"	"94"	"2882182.93255615"	"HCD"	"MS2"	"5.35129"	"80.5"	"100.000"	"71.4385"	"23562"	"23562"	"23539"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.6"	""	"95.0"	""	"107.5"	""	"147.2"	""	"156.1"	"157.3"	""	"872"	"22"	"36.000"	"29.000"	"0.287399818326524"	"23"	"0.0001308"	"0.0002631"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPSIFESLQK"	"[K].lDPSIFESLQk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"868.00702"	"1735.00676"	"1735.00421"	"1.47"	"0.00128"	"8/94"	"8"	"94"	"691353.196899414"	"HCD"	"MS2"	"22.87505"	"68.5"	"100.000"	"71.3655"	"23584"	"23584"	"23562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.8"	""	"86.5"	""	"92.7"	""	"118.5"	""	"130.1"	"136.0"	""	"837"	"11"	"36.000"	"29.000"	"3.16006097277984"	"16"	"0.0006396"	"0.006397"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWFEPLVEDMQR"	"[K].gWFEPLVEDMQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"868.43555"	"1735.86382"	"1735.86751"	"-2.13"	"-0.00185"	"11/100"	"11"	"100"	"432513.175415039"	"HCD"	"MS2"	"42.09415"	"35.2"	"100.000"	"73.2399"	"24298"	"24298"	"24273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.0"	""	"42.7"	""	"52.0"	""	"54.5"	""	"68.9"	"72.5"	""	"772"	"8"	"35.000"	"28.000"	"5.69622721844496"	"20"	"0.005478"	"0.1749"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWFEPLVEDMQR"	"[K].gWFEPLVEDMQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"868.43738"	"1735.86748"	"1735.86751"	"-0.02"	"-0.00001"	"8/100"	"8"	"100"	"442183.852600098"	"HCD"	"MS2"	"21.94669"	"37.8"	"100.000"	"73.0763"	"24283"	"24283"	"24255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.1"	""	"50.7"	""	"48.8"	""	"66.3"	""	"76.0"	"68.9"	""	"791"	"42"	"35.000"	"28.000"	"0.00248397080910667"	"27"	"0"	"0.0001177"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTLEEFLASTQR"	"[R].lVTLEEFLASTQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.49213"	"1735.97698"	"1735.97917"	"-1.26"	"-0.00109"	"4/114"	"4"	"114"	"98866.4905395508"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"84.1259"	"28779"	"28779"	"28753"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.4"	""	"6.4"	""	"10.2"	""	"13.6"	""	"14.5"	"17.6"	""	"1073"	"18"	"37.000"	"30.000"	"0.884239123053435"	"14"	"0.001454"	"0.01982"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTLEEFLASTQR"	"[R].lVTLEEFLASTQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.49261"	"1735.97795"	"1735.97917"	"-0.70"	"-0.00061"	"6/114"	"6"	"114"	"136829.939758301"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"84.0735"	"28707"	"28707"	"28676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.7"	""	"7.9"	""	"11.9"	""	"15.2"	""	"13.7"	"14.7"	""	"1034"	"16"	"37.000"	"30.000"	"1.26034819309665"	"14"	"0.0006037"	"0.006019"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVPQNLMFGK"	"[R].lDVPQNLmFGk.[W]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"868.49286"	"1735.97844"	"1735.98170"	"-1.88"	"-0.00163"	"10/92"	"10"	"92"	"735617.815490723"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"57.8033"	"18007"	"18007"	"17979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.0"	""	"59.4"	""	"78.1"	""	"131.6"	""	"112.4"	"101.1"	""	"1046"	"39"	"37.000"	"30.000"	"0.00594979070485655"	"16"	"0.0001889"	"0.0004508"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEEWAQGIFK"	"[K].vAEEWAQGIFk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"868.49329"	"1735.97930"	"1735.97833"	"0.56"	"0.00048"	"15/90"	"15"	"90"	"430334.613464355"	"HCD"	"MS2"	"0"	"42.4"	"100.000"	"65.9501"	"21330"	"21330"	"21305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.5"	""	"64.7"	""	"65.3"	""	"66.5"	"2.1"	"74.4"	"79.4"	""	"1032"	"53"	"37.000"	"30.000"	"0.000267700820087344"	"24"	"0"	"2.532E-06"	"1.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEEWAQGIFK"	"[K].vAEEWAQGIFk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"868.49359"	"1735.97991"	"1735.97833"	"0.91"	"0.00079"	"15/90"	"15"	"90"	"506089.907470703"	"HCD"	"MS2"	"0"	"49.9"	"100.000"	"65.8521"	"21343"	"21343"	"21315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.2"	""	"73.2"	""	"76.4"	""	"72.3"	"0.7"	"101.3"	"87.9"	""	"1051"	"48"	"37.000"	"30.000"	"0.000880182481351893"	"18"	"0"	"6.436E-06"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVPQNLMFGK"	"[R].lDVPQNLmFGk.[W]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"868.49408"	"1735.98088"	"1735.98170"	"-0.47"	"-0.00041"	"10/92"	"10"	"92"	"986966.405761719"	"HCD"	"MS2"	"0"	"70.1"	"100.000"	"58.0808"	"18174"	"18174"	"18149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.7"	""	"78.5"	""	"78.8"	""	"189.7"	"8.6"	"120.3"	"120.3"	""	"1054"	"55"	"37.000"	"30.000"	"0.000173304809471643"	"18"	"0.0001889"	"0.0003765"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITGASLADIMAK"	"[R].aITGASLADImAk.[R]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"579.33832"	"1736.00040"	"1736.00283"	"-1.40"	"-0.00081"	"13/108"	"13"	"108"	"3514609.28424072"	"HCD"	"MS2"	"39.43498"	"134.0"	"100.000"	"49.3629"	"14587"	"14587"	"14559"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.7"	""	"182.9"	""	"184.6"	""	"240.6"	"4.6"	"230.6"	"225.4"	""	"953"	"28"	"36.000"	"29.000"	"0.0738011118911797"	"17"	"0.0001889"	"0.0005465"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITGASLADIMAK"	"[R].aITGASLADImAk.[R]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"0.9815"	"0.0000"	"1"	"1"	"1"	"868.50531"	"1736.00334"	"1736.00283"	"0.30"	"0.00026"	"16/108"	"16"	"108"	"373584.139587402"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"49.6476"	"14747"	"14747"	"14718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.6"	""	"46.4"	""	"45.3"	""	"81.3"	""	"65.5"	"50.0"	""	"941"	"54"	"36.000"	"29.000"	"0.000186878624025372"	"17"	"0"	"0.0001809"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNNNVYTIAK"	"[K].lQNNNVYTIAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"868.50806"	"1736.00884"	"1736.01069"	"-1.07"	"-0.00093"	"9/98"	"9"	"98"	"468139.926635742"	"HCD"	"MS2"	"100"	"47.1"	"100.000"	"41.5954"	"11472"	"11472"	"11447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.4"	""	"54.8"	""	"69.0"	""	"80.4"	""	"80.3"	"93.0"	""	"911"	"54"	"36.000"	"29.000"	"0.000192525553797982"	""	"0"	"6.277E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVETLLDLIMK"	"[K].sVETLLDLImk.[R]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"579.34680"	"1736.02585"	"1736.02798"	"-1.23"	"-0.00071"	"9/92"	"9"	"92"	"286806.296936035"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"85.7458"	"29435"	"29435"	"29405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"11.0"	""	"8.9"	""	"29.6"	""	"26.0"	"19.4"	""	"722"	"34"	"35.000"	"28.000"	"0.0146726041828642"	"20"	"0"	"0.0001707"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVETLLDLIMK"	"[K].sVETLLDLImk.[R]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"Q99P74"	"Ras-related protein Rab-27B OS=Rattus norvegicus OX=10116 GN=Rab27b PE=2 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"579.34735"	"1736.02750"	"1736.02798"	"-0.28"	"-0.00016"	"10/92"	"10"	"92"	"246401.264404297"	"HCD"	"MS2"	"12.87818"	"10.9"	"100.000"	"85.6930"	"29366"	"29366"	"29336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.3"	""	"13.3"	"2.1"	"11.9"	""	"23.5"	""	"24.2"	"25.2"	""	"716"	"32"	"35.000"	"28.000"	"0.0234359750316084"	"18"	"0.0002277"	"0.001322"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLPGLLPGPADK"	"[R].sLLPGLLPGPADk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.36145"	"1736.06980"	"1736.07223"	"-1.40"	"-0.00081"	"12/118"	"12"	"118"	"3199531.62982178"	"HCD"	"MS2"	"18.35359"	"81.5"	"100.000"	"66.3623"	"21551"	"21551"	"21523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.4"	""	"107.9"	""	"104.9"	""	"130.4"	"1.5"	"166.5"	"164.4"	""	"408"	"22"	"33.000"	"26.000"	"0.13050590643846"	"14"	"0.0001859"	"0.0003293"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLPGLLPGPADK"	"[R].sLLPGLLPGPADk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.36157"	"1736.07016"	"1736.07223"	"-1.19"	"-0.00069"	"12/118"	"12"	"118"	"2411148.76623535"	"HCD"	"MS2"	"24.61965"	"65.7"	"100.000"	"66.3561"	"21496"	"21496"	"21465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.3"	""	"76.2"	""	"82.0"	""	"118.2"	"0.4"	"137.7"	"137.2"	""	"408"	"29"	"33.000"	"26.000"	"0.0240785409672953"	"14"	"0"	"0.0001432"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLPGLLPGPADK"	"[R].sLLPGLLPGPADk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"868.53992"	"1736.07256"	"1736.07223"	"0.19"	"0.00016"	"6/118"	"6"	"118"	"278099.651733398"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"66.4476"	"21586"	"21586"	"21555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.2"	""	"22.2"	""	"20.4"	""	"32.6"	""	"43.6"	"39.6"	""	"385"	"35"	"32.000"	"25.000"	"0.00550086179599677"	"19"	"0.0003839"	"0.001728"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLPGLLPGPADK"	"[R].sLLPGLLPGPADk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.54010"	"1736.07292"	"1736.07223"	"0.40"	"0.00035"	"12/118"	"12"	"118"	"345716.207275391"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"66.4715"	"21543"	"21543"	"21513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.4"	""	"24.1"	""	"19.9"	""	"46.4"	"0.5"	"57.5"	"49.3"	""	"370"	"40"	"32.000"	"25.000"	"0.00184150002210032"	"15"	"0.0001889"	"0.001078"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAHYAEYWK"	"[R].nPAHYAEYWk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"579.64337"	"1736.91556"	"1736.91606"	"-0.29"	"-0.00017"	"8/90"	"8"	"90"	"9575716.9473877"	"HCD"	"MS2"	"24.20601"	"324.2"	"100.000"	"38.0395"	"9973"	"9973"	"9943"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"475.3"	""	"428.7"	""	"474.4"	""	"545.6"	"20.3"	"535.8"	"588.2"	""	"1138"	"36"	"37.000"	"30.000"	"0.0133694107506269"	"18"	"0"	"2.067E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAHYAEYWK"	"[R].nPAHYAEYWk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"579.64349"	"1736.91593"	"1736.91606"	"-0.08"	"-0.00004"	"7/90"	"7"	"90"	"10278432.5355225"	"HCD"	"MS2"	"12.18286"	"305.0"	"89.712"	"38.1418"	"10058"	"10058"	"10033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"459.6"	""	"406.7"	""	"444.8"	""	"506.7"	"19.0"	"506.0"	"543.5"	""	"1155"	"32"	"37.000"	"30.000"	"0.040137654340753"	"24"	"0"	"6.828E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNAIVYMIDAADR"	"[R].gVNAIVYMIDAADR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.64441"	"1736.91867"	"1736.92027"	"-0.92"	"-0.00053"	"14/132"	"14"	"132"	"814596.993530273"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"76.0113"	"25476"	"25476"	"25455"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.0"	""	"9.6"	""	"22.4"	""	"27.5"	""	"29.1"	"29.3"	""	"1138"	"51"	"37.000"	"30.000"	"0.000459316732211589"	"16"	"0"	"3.617E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNAIVYMIDAADR"	"[R].gVNAIVYMIDAADR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"579.64508"	"1736.92069"	"1736.92027"	"0.24"	"0.00014"	"13/132"	"13"	"132"	"831076.610595703"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"75.9906"	"25420"	"25420"	"25393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.8"	""	"13.8"	""	"20.5"	""	"25.7"	""	"30.2"	"31.3"	""	"1150"	"45"	"37.000"	"30.000"	"0.00184785480971818"	"16"	"0"	"9.11E-06"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEEWAQGIFK"	"[K].vAEEWAqGIFk.[L]"	"N-Term(TMT6plex); Q7(Deamidated); K11(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"868.99280"	"1736.97832"	"1736.96234"	"9.20"	"0.00799"	"9/90"	"9"	"90"	"601158.552429199"	"HCD"	"MS2"	"0"	"59.0"	"100.000"	"65.7785"	"21313"	"21313"	"21283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.4"	""	"86.2"	""	"86.8"	""	"90.0"	"1.3"	"106.2"	"113.4"	""	"1018"	"30"	"37.000"	"30.000"	"0.0484973247488039"	"20"	"0.0006037"	"0.005887"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNLEDILSYPK"	"[K].sNLEDILSYPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"868.99506"	"1736.98284"	"1736.98347"	"-0.37"	"-0.00032"	"14/112"	"14"	"112"	"1060074.54003906"	"HCD"	"MS2"	"0"	"80.1"	"100.000"	"60.9499"	"19288"	"19288"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.3"	""	"124.0"	""	"100.3"	""	"139.1"	""	"130.3"	"126.0"	""	"991"	"52"	"36.000"	"29.000"	"0.000305522823422364"	"23"	"0"	"3.08E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNLEDILSYPK"	"[K].sNLEDILSYPk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"868.99518"	"1736.98308"	"1736.98347"	"-0.23"	"-0.00020"	"15/112"	"15"	"112"	"892279.998779297"	"HCD"	"MS2"	"0"	"66.3"	"100.000"	"61.0762"	"19393"	"19393"	"19363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.1"	""	"112.5"	""	"83.7"	""	"109.9"	"0.8"	"113.2"	"90.3"	""	"986"	"52"	"36.000"	"29.000"	"0.000322735633815167"	"21"	"0"	"1.627E-05"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLVEMPLAHK"	"[K].lQLVEMPLAHk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"3"	"3"	"0.4923"	"0.0000"	"1"	"1"	"1"	"579.68774"	"1737.04868"	"1737.04972"	"-0.60"	"-0.00035"	"8/98"	"8"	"98"	"5006486.21191406"	"HCD"	"MS2"	"32.21619"	"132.3"	"100.000"	"53.9125"	"16417"	"16417"	"16403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.9"	""	"186.8"	""	"213.4"	""	"176.6"	"1.0"	"251.8"	"230.9"	""	"502"	"65"	"33.000"	"27.000"	"8.0292267253254E-06"	""	"0"	"4.624E-06"	"1.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEQPGVYTK"	"[R].kEQPGVYTk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.68787"	"1737.04905"	"1737.05138"	"-1.35"	"-0.00078"	"6/92"	"6"	"92"	"3335498.38525391"	"HCD"	"MS2"	"21.74299"	"221.0"	"100.000"	"29.3359"	"6460"	"6460"	"6439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"339.4"	""	"373.5"	""	"235.6"	""	"392.2"	""	"412.9"	"339.2"	""	"508"	"15"	"34.000"	"27.000"	"0.777738712157432"	"13"	"0.0001308"	"0.0002073"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEQPGVYTK"	"[R].kEQPGVYTk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.68823"	"1737.05014"	"1737.05138"	"-0.71"	"-0.00041"	"6/92"	"6"	"92"	"2608336.15490723"	"HCD"	"MS2"	"14.04064"	"177.7"	"100.000"	"29.2895"	"6400"	"6400"	"6374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.5"	""	"279.3"	""	"214.8"	""	"303.5"	"0.7"	"340.2"	"277.2"	""	"494"	"18"	"33.000"	"26.000"	"0.422373782827301"	"14"	"0.0001308"	"0.0002423"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFLALASSSLLK"	"[K].eFLALASSSLLk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.02911"	"1737.05095"	"1737.05624"	"-3.05"	"-0.00265"	"11/104"	"11"	"104"	"147904.152770996"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"77.1512"	"25934"	"25934"	"25909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.5"	""	"15.6"	""	"20.7"	""	"22.0"	""	"32.9"	"24.7"	""	"492"	"25"	"33.000"	"26.000"	"0.0751510593851017"	"14"	"0.0001889"	"0.0009241"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFLALASSSLLK"	"[K].eFLALASSSLLk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"579.68951"	"1737.05399"	"1737.05624"	"-1.30"	"-0.00075"	"11/104"	"11"	"104"	"1358692.00415039"	"HCD"	"MS2"	"49.08498"	"44.0"	"100.000"	"77.0096"	"25825"	"25825"	"25801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.5"	""	"45.9"	""	"53.5"	""	"91.1"	"0.1"	"93.7"	"91.6"	""	"481"	"37"	"33.000"	"26.000"	"0.00428662093571265"	"17"	"0"	"6.522E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFLALASSSLLK"	"[K].eFLALASSSLLk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"579.68970"	"1737.05454"	"1737.05624"	"-0.98"	"-0.00057"	"13/104"	"13"	"104"	"1357937.3092041"	"HCD"	"MS2"	"21.8867"	"56.0"	"100.000"	"76.9553"	"25854"	"25854"	"25829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.6"	""	"55.5"	""	"70.1"	""	"107.9"	"0.0"	"117.9"	"118.1"	""	"467"	"33"	"33.000"	"26.000"	"0.0118928758391855"	"18"	"0.0001308"	"0.0002197"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFLALASSSLLK"	"[K].eFLALASSSLLk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"869.03381"	"1737.06035"	"1737.05624"	"2.36"	"0.00205"	"14/104"	"14"	"104"	"271410.357910156"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"76.9842"	"25815"	"25815"	"25789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.3"	""	"22.5"	""	"28.8"	""	"32.1"	""	"46.0"	"45.7"	""	"441"	"47"	"33.000"	"26.000"	"0.000418223655627058"	"23"	"0"	"5.787E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYTPIYTPFFMR"	"[R].gYTPIYTPFFmR.[K]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.44781"	"1737.88835"	"1737.88718"	"0.67"	"0.00059"	"6/96"	"6"	"96"	"374360.093505859"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"63.3321"	"20261"	"20261"	"20233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.6"	""	"31.9"	""	"42.3"	""	"67.1"	""	"31.9"	"41.1"	""	"967"	"23"	"36.000"	"29.000"	"0.256682628785683"	"14"	"0.004291"	"0.1127"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGFEIETVK"	"[K].lFPGFEIETVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"869.51208"	"1738.01689"	"1738.01913"	"-1.29"	"-0.00112"	"10/86"	"10"	"86"	"844024.167358398"	"HCD"	"MS2"	"0"	"63.3"	"100.000"	"73.5680"	"24483"	"24483"	"24463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.6"	""	"106.9"	""	"102.8"	""	"85.1"	""	"91.3"	"89.0"	""	"747"	"39"	"35.000"	"28.000"	"0.00491236474823801"	"21"	"0"	"0.0001047"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGFEIETVK"	"[K].lFPGFEIETVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"3"	"3"	"0.6585"	"0.0000"	"1"	"1"	"1"	"580.01086"	"1738.01804"	"1738.01913"	"-0.63"	"-0.00036"	"12/86"	"12"	"86"	"2385687.56060791"	"HCD"	"MS2"	"28.53588"	"71.1"	"100.000"	"73.5746"	"24486"	"24486"	"24463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.1"	""	"110.9"	""	"100.5"	""	"104.8"	"0.3"	"114.1"	"137.1"	""	"740"	"41"	"35.000"	"28.000"	"0.00302831971609872"	""	"0"	"5.073E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGFEIETVK"	"[K].lFPGFEIETVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"869.51276"	"1738.01824"	"1738.01913"	"-0.51"	"-0.00045"	"10/86"	"10"	"86"	"1073952.97979736"	"HCD"	"MS2"	"25.91091"	"87.9"	"100.000"	"73.5906"	"24441"	"24441"	"24417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.6"	""	"141.8"	""	"146.9"	""	"122.7"	""	"138.4"	"117.4"	""	"739"	"37"	"35.000"	"28.000"	"0.0069761280349108"	"16"	"0"	"0.0001233"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPGFEIETVK"	"[K].lFPGFEIETVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"580.01105"	"1738.01859"	"1738.01913"	"-0.31"	"-0.00018"	"12/86"	"12"	"86"	"2798789.77581787"	"HCD"	"MS2"	"14.46997"	"79.8"	"100.000"	"73.6275"	"24456"	"24456"	"24433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.1"	""	"129.6"	""	"120.1"	""	"107.6"	"0.2"	"135.5"	"137.7"	""	"728"	"39"	"35.000"	"28.000"	"0.00444735076300013"	"27"	"0"	"5.212E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLLDSSLEYK"	"[R].iVLLDSSLEYk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"869.52148"	"1738.03569"	"1738.04026"	"-2.63"	"-0.00228"	"9/88"	"9"	"88"	"1042087.73974609"	"HCD"	"MS2"	"0"	"82.9"	"100.000"	"67.0838"	"21842"	"21842"	"21827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.8"	""	"101.9"	""	"107.1"	""	"144.3"	"0.8"	"170.4"	"158.4"	""	"620"	"59"	"34.000"	"27.000"	"3.6505785179145E-05"	"25"	"0"	"1.333E-05"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLLDSSLEYK"	"[R].iVLLDSSLEYk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.8592"	"0.0000"	"1"	"1"	"1"	"869.52362"	"1738.03996"	"1738.04026"	"-0.17"	"-0.00015"	"10/88"	"10"	"88"	"965815.598388672"	"HCD"	"MS2"	"0"	"80.5"	"100.000"	"67.1458"	"21817"	"21817"	"21798"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.6"	""	"99.1"	""	"101.2"	""	"137.3"	""	"168.2"	"164.1"	""	"589"	"71"	"34.000"	"27.000"	"2.33929665126301E-06"	"27"	"0"	"2.93E-06"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHTLILVNNK"	"[K].dLHTLILVNNk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.02539"	"1738.06162"	"1738.06273"	"-0.64"	"-0.00037"	"13/90"	"13"	"90"	"10458928.8850708"	"HCD"	"MS2"	"60.50004"	"280.0"	"100.000"	"46.7947"	"13536"	"13536"	"13512"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"304.0"	""	"324.1"	""	"336.2"	""	"492.4"	"3.9"	"623.6"	"577.3"	""	"412"	"20"	"33.000"	"26.000"	"0.184445141703216"	"14"	"0.0001889"	"0.0005173"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHTLILVNNK"	"[K].dLHTLILVNNk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.02637"	"1738.06455"	"1738.06273"	"1.05"	"0.00061"	"6/90"	"6"	"90"	"8830942.47302246"	"HCD"	"MS2"	"40.82161"	"244.9"	"100.000"	"47.0999"	"13709"	"13709"	"13682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"280.3"	""	"290.5"	""	"301.1"	""	"413.3"	"2.1"	"537.9"	"501.9"	""	"418"	"4"	"33.000"	"26.000"	"7.46700231737531"	"13"	"0.0001889"	"0.000854"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSKPIFAK"	"[R].fLSkPIFAk.[M]"	"N-Term(TMT6plex); K4(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.04559"	"1738.12223"	"1738.12342"	"-0.69"	"-0.00040"	"8/74"	"8"	"74"	"8999505.41918945"	"HCD"	"MS2"	"33.42461"	"586.5"	"100.000"	"52.0522"	"15677"	"15677"	"15650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1023.2"	""	"1062.8"	""	"1165.7"	""	"779.0"	""	"723.3"	"777.5"	""	"129"	"2"	"28.000"	"21.000"	"4.39096236357463"	"13"	"0.0006737"	"0.00667"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMDNNWTLMK"	"[K].qMDNNWTLMk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"869.95496"	"1738.90264"	"1738.90207"	"0.33"	"0.00028"	"8/98"	"8"	"98"	"426402.450683594"	"HCD"	"MS2"	"0"	"49.7"	"100.000"	"50.7611"	"15149"	"15149"	"15122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.7"	""	"74.2"	""	"70.5"	""	"59.0"	""	"94.7"	"92.8"	""	"1102"	"40"	"37.000"	"30.000"	"0.00496765696820882"	"26"	"0"	"9.684E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEPQLPSCFK"	"[R].wEPQLPScFk.[V]"	"N-Term(TMT6plex); C8(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.30664"	"1738.90537"	"1738.90609"	"-0.42"	"-0.00024"	"9/94"	"9"	"94"	"1499815.22955322"	"HCD"	"MS2"	"64.46513"	"58.5"	"100.000"	"72.9911"	"24248"	"24248"	"24223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.4"	""	"83.9"	""	"75.2"	""	"84.1"	""	"120.0"	"123.5"	""	"1104"	"17"	"37.000"	"30.000"	"1.09380291824441"	"14"	"0.0001859"	"0.0003444"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEPQLPSCFK"	"[R].wEPQLPScFk.[V]"	"N-Term(TMT6plex); C8(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"869.95636"	"1738.90544"	"1738.90609"	"-0.37"	"-0.00032"	"6/94"	"6"	"94"	"370963.408447266"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"73.1569"	"24264"	"24264"	"24241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.2"	""	"42.0"	""	"43.1"	""	"59.4"	"0.2"	"71.1"	"74.0"	""	"1104"	"12"	"37.000"	"30.000"	"3.17642845410111"	"15"	"0.0006037"	"0.004176"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEPQLPSCFK"	"[R].wEPQLPScFk.[V]"	"N-Term(TMT6plex); C8(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.30725"	"1738.90720"	"1738.90609"	"0.64"	"0.00037"	"9/94"	"9"	"94"	"1608407.82061768"	"HCD"	"MS2"	"12.88093"	"55.1"	"100.000"	"73.0507"	"24221"	"24221"	"24193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.2"	""	"76.3"	""	"69.1"	""	"82.9"	"1.2"	"118.6"	"111.1"	""	"1113"	"18"	"37.000"	"30.000"	"0.852050172426051"	"14"	"0.0003839"	"0.001674"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEPQLPSCFK"	"[R].wEPQLPScFk.[V]"	"N-Term(TMT6plex); C8(Methylthio); K10(TMT6plex)"	"1"	"1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"Q63135"	"Complement component receptor 1-like protein OS=Rattus norvegicus OX=10116 GN=Cr1l PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.95801"	"1738.90874"	"1738.90609"	"1.52"	"0.00132"	"6/94"	"6"	"94"	"186425.628295898"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"73.2307"	"24346"	"24346"	"24319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"23.3"	""	"20.7"	""	"28.3"	""	"34.5"	"38.7"	""	"1136"	"9"	"37.000"	"30.000"	"7.57440173468769"	"13"	"0.003286"	"0.06835"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPVPFFSLLQYE"	"[K].lGPVPFFSLLQYE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.98383"	"1738.96037"	"1738.96173"	"-0.78"	"-0.00068"	"7/106"	"7"	"106"	"164509.454833984"	"HCD"	"MS2"	"0"	"0.9"	"100.000"	"113.0203"	"36574"	"36574"	"36572"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"3.4"	""	"2.7"	""	""	""	"2.3"	""	""	"1142"	"13"	"37.000"	"30.000"	"2.58604518124968"	"13"	"0.001217"	"0.01861"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPVPFFSLLQYE"	"[K].lGPVPFFSLLQYE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"869.98492"	"1738.96257"	"1738.96173"	"0.49"	"0.00042"	"7/106"	"7"	"106"	"266873.618286133"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"112.8648"	"36558"	"36558"	"36556"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	"5.4"	""	"6.5"	""	"2.8"	""	"1.9"	"2.3"	""	"1136"	"24"	"37.000"	"30.000"	"0.202464243786107"	"15"	"0.0006037"	"0.004894"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPVPFFSLLQYE"	"[K].lGPVPFFSLLQYE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.98517"	"1738.96306"	"1738.96173"	"0.77"	"0.00067"	"3/106"	"3"	"106"	"79980.4970703125"	"HCD"	"MS2"	"0"	"0.3"	"100.000"	"112.6092"	"36520"	"36520"	"36518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"2.7"	""	""	""	""	""	""	"1133"	"1"	"37.000"	"30.000"	"47.2280391087023"	"13"	"0.006875"	"0.2598"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFFPDEAINK"	"[K].sLFFPDEAINk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"869.99048"	"1738.97368"	"1738.97799"	"-2.48"	"-0.00216"	"17/94"	"17"	"94"	"1935536.68206787"	"HCD"	"MS2"	"0"	"148.1"	"100.000"	"62.0818"	"19803"	"19803"	"19779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.8"	""	"194.9"	""	"189.7"	""	"258.1"	""	"268.2"	"259.1"	""	"1059"	"32"	"37.000"	"30.000"	"0.0358811178279852"	"16"	"0.0001889"	"0.0004663"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFFPDEAINK"	"[K].sLFFPDEAINk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"869.99127"	"1738.97527"	"1738.97799"	"-1.57"	"-0.00136"	"17/94"	"17"	"94"	"1646848.80682373"	"HCD"	"MS2"	"48.40088"	"121.3"	"100.000"	"61.9273"	"19687"	"19687"	"19657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"213.5"	""	"154.6"	""	"167.8"	""	"190.2"	"0.2"	"211.9"	"209.8"	""	"1051"	"60"	"37.000"	"30.000"	"5.64381436185324E-05"	"23"	"0"	"7.823E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFFPDEAINK"	"[K].sLFFPDEAINk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"580.33105"	"1738.97861"	"1738.97799"	"0.36"	"0.00021"	"12/94"	"12"	"94"	"7089070.04589844"	"HCD"	"MS2"	"14.03021"	"156.3"	"100.000"	"62.1186"	"19818"	"19818"	"19795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"247.6"	""	"205.3"	""	"217.7"	""	"250.0"	""	"283.3"	"276.3"	""	"1008"	"34"	"37.000"	"30.000"	"0.022255150546607"	"20"	"0.0003571"	"0.001531"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLDELYGTWR"	"[R].kLDELYGTWR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.99585"	"1738.98442"	"1738.98923"	"-2.76"	"-0.00240"	"15/100"	"15"	"100"	"794172.404052734"	"HCD"	"MS2"	"0"	"70.2"	"100.000"	"46.3393"	"13350"	"13350"	"13320"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.9"	""	"88.1"	""	"98.7"	""	"109.9"	"1.1"	"156.2"	"115.5"	""	"977"	"9"	"36.000"	"29.000"	"6.90024590548215"	"13"	"0.0009404"	"0.00993"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLDELYGTWR"	"[R].kLDELYGTWR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"1"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"869.99786"	"1738.98845"	"1738.98923"	"-0.45"	"-0.00039"	"8/100"	"8"	"100"	"846174.62310791"	"HCD"	"MS2"	"0"	"62.6"	"100.000"	"46.5485"	"13483"	"13483"	"13459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.0"	""	"93.7"	""	"100.0"	""	"93.1"	"0.2"	"105.5"	"103.8"	""	"930"	"28"	"36.000"	"29.000"	"0.0823100665617601"	"26"	"0.0001308"	"0.0002478"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLDELYGTWR"	"[R].kLDELYGTWR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.33459"	"1738.98923"	"1738.98923"	"0.00"	"0.00000"	"8/100"	"8"	"100"	"23594566.8944092"	"HCD"	"MS2"	"13.44671"	"550.5"	"49.475"	"46.5324"	"13476"	"13476"	"13459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"789.4"	""	"821.1"	""	"860.5"	""	"844.2"	""	"981.2"	"918.4"	""	"932"	"8"	"36.000"	"29.000"	"7.36861586299998"	"13"	"0"	"0.000118"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLDELYGTWR"	"[R].kLDELYGTWR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"1"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"580.33466"	"1738.98941"	"1738.98923"	"0.11"	"0.00006"	"7/100"	"7"	"100"	"27433803.5439453"	"HCD"	"MS2"	"27.02419"	"550.9"	"42.543"	"46.2389"	"13308"	"13308"	"13288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"841.9"	""	"812.6"	""	"820.0"	""	"815.5"	"0.2"	"950.4"	"972.8"	""	"922"	"18"	"36.000"	"29.000"	"0.702588319500551"	"20"	"0.0001308"	"0.0002127"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].eSNTAGIDIFSk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"870.48175"	"1739.95622"	"1739.95799"	"-1.01"	"-0.00088"	"15/126"	"15"	"126"	"1309563.14550781"	"HCD"	"MS2"	"0"	"119.2"	"100.000"	"51.3153"	"15426"	"15426"	"15398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.4"	""	"158.3"	""	"156.7"	""	"200.8"	""	"240.2"	"239.1"	""	"1085"	"53"	"37.000"	"30.000"	"0.000298125924067761"	""	"0"	"1.093E-05"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].eSNTAGIDIFSk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.3600"	"0.0000"	"1"	"1"	"1"	"580.65735"	"1739.95749"	"1739.95799"	"-0.28"	"-0.00016"	"13/126"	"13"	"126"	"5252528.16149902"	"HCD"	"MS2"	"12.42691"	"176.6"	"100.000"	"51.1846"	"15322"	"15322"	"15298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"207.2"	""	"202.0"	""	"223.4"	""	"302.4"	"3.7"	"360.7"	"377.7"	""	"1079"	"25"	"37.000"	"30.000"	"0.157758020784648"	"30"	"0"	"0.0001054"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].eSNTAGIDIFSk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"580.65747"	"1739.95786"	"1739.95799"	"-0.07"	"-0.00004"	"13/126"	"13"	"126"	"5317654.04040527"	"HCD"	"MS2"	"27.68952"	"171.4"	"100.000"	"51.4283"	"15472"	"15472"	"15446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.4"	""	"198.3"	""	"216.4"	""	"317.1"	"7.0"	"332.3"	"342.6"	""	"1077"	"18"	"37.000"	"30.000"	"0.875358004971636"	"20"	"0.0001889"	"0.0006551"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].eSNTAGIDIFSk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.7887"	"0.0000"	"1"	"1"	"1"	"870.48267"	"1739.95806"	"1739.95799"	"0.04"	"0.00003"	"18/126"	"18"	"126"	"976432.30078125"	"HCD"	"MS2"	"0"	"95.3"	"100.000"	"51.0762"	"15278"	"15278"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.7"	""	"135.5"	""	"121.0"	""	"154.3"	""	"183.9"	"193.5"	""	"1076"	"71"	"37.000"	"30.000"	"4.31302798102572E-06"	""	"0"	"2.076E-06"	"1.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESISDVGFGMLK"	"[K].eSISDVGFGMLk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQR2"	"Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus OX=10116 GN=Agps PE=2 SV=1"	"Q9EQR2"	"Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus OX=10116 GN=Agps PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.99036"	"1740.95652"	"1740.96063"	"-2.36"	"-0.00137"	"7/96"	"7"	"96"	"1301507.10980225"	"HCD"	"MS2"	"39.07808"	"67.6"	"100.000"	"63.2706"	"20289"	"20289"	"20259"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.3"	""	"98.6"	""	"97.6"	""	"88.7"	""	"131.9"	"137.9"	""	"1016"	"19"	"37.000"	"30.000"	"0.629308665957428"	"14"	"0.0001889"	"0.0006394"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDVSGYPTLK"	"[K].rFDVSGYPTLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"1"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"581.00574"	"1741.00266"	"1741.00488"	"-1.27"	"-0.00074"	"14/112"	"14"	"112"	"9162715.30944824"	"HCD"	"MS2"	"0"	"270.2"	"82.535"	"41.8636"	"11537"	"11537"	"11518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"380.9"	""	"358.1"	""	"396.2"	""	"422.6"	""	"503.2"	"500.7"	""	"821"	"15"	"36.000"	"29.000"	"1.31920765111185"	"22"	"0"	"0.0001536"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDVSGYPTLK"	"[K].rFDVSGYPTLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"1"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"581.00574"	"1741.00266"	"1741.00488"	"-1.27"	"-0.00074"	"5/112"	"5"	"112"	"7558736.39111328"	"HCD"	"MS2"	"56.12478"	"287.1"	"100.000"	"42.0839"	"11672"	"11672"	"11649"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"403.2"	""	"392.6"	""	"415.6"	""	"469.2"	""	"513.0"	"527.8"	""	"821"	"21"	"36.000"	"29.000"	"0.302213013521589"	"17"	"0.0001859"	"0.00032"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDVSGYPTLK"	"[K].rFDVSGYPTLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"1"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"581.00623"	"1741.00412"	"1741.00488"	"-0.43"	"-0.00025"	"5/112"	"5"	"112"	"5322434.24127197"	"HCD"	"MS2"	"19.93295"	"306.1"	"100.000"	"42.2004"	"11673"	"11673"	"11644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"446.8"	""	"412.4"	""	"450.2"	""	"416.9"	"0.1"	"585.5"	"589.5"	""	"792"	"0"	"35.000"	"28.000"	"37.6439498287888"	"13"	"0.001783"	"0.02476"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDVSGYPTLK"	"[K].rFDVSGYPTLk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"1"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"581.00665"	"1741.00541"	"1741.00488"	"0.30"	"0.00018"	"5/112"	"5"	"112"	"7160854.02514648"	"HCD"	"MS2"	"19.4207"	"340.2"	"100.000"	"42.3725"	"11787"	"11787"	"11767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"513.0"	""	"465.3"	""	"501.3"	""	"487.9"	"5.6"	"616.4"	"632.1"	""	"790"	"23"	"35.000"	"28.000"	"0.220088370828112"	"21"	"7.476E-05"	"0.0001914"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPLQELIEK"	"[R].eLAPLQELIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3T1J9"	"MOB kinase activator 1A OS=Rattus norvegicus OX=10116 GN=Mob1a PE=2 SV=3"	"Q3T1J9"	"MOB kinase activator 1A OS=Rattus norvegicus OX=10116 GN=Mob1a PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.02856"	"1741.04985"	"1741.05116"	"-0.75"	"-0.00065"	"13/108"	"13"	"108"	"691193.596557617"	"HCD"	"MS2"	"34.06932"	"41.9"	"100.000"	"71.3838"	"23592"	"23592"	"23562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.0"	""	"63.1"	""	"61.5"	""	"59.0"	"0.6"	"72.0"	"71.9"	""	"418"	"20"	"33.000"	"26.000"	"0.222918589337124"	"14"	"0.0003839"	"0.002046"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPLQELIEK"	"[R].eLAPLQELIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3T1J9"	"MOB kinase activator 1A OS=Rattus norvegicus OX=10116 GN=Mob1a PE=2 SV=3"	"Q3T1J9"	"MOB kinase activator 1A OS=Rattus norvegicus OX=10116 GN=Mob1a PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.02863"	"1741.04997"	"1741.05116"	"-0.68"	"-0.00059"	"8/108"	"8"	"108"	"855030.288024902"	"HCD"	"MS2"	"41.69132"	"47.2"	"100.000"	"71.4914"	"23584"	"23584"	"23555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.7"	""	"66.4"	""	"68.6"	""	"61.6"	""	"84.3"	"88.8"	""	"418"	"20"	"33.000"	"26.000"	"0.223432469757535"	"14"	"0.0001308"	"0.0002856"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPLQELIEK"	"[R].eLAPLQELIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3T1J9"	"MOB kinase activator 1A OS=Rattus norvegicus OX=10116 GN=Mob1a PE=2 SV=3"	"Q3T1J9"	"MOB kinase activator 1A OS=Rattus norvegicus OX=10116 GN=Mob1a PE=2 SV=3"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"581.02307"	"1741.05466"	"1741.05116"	"2.01"	"0.00117"	"11/108"	"11"	"108"	"1055292.29742432"	"HCD"	"MS2"	"15.90062"	"44.1"	"100.000"	"71.5721"	"23617"	"23617"	"23587"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.2"	""	"45.8"	""	"54.4"	""	"83.5"	"0.5"	"85.4"	"90.4"	""	"381"	"25"	"32.000"	"25.000"	"0.0613613604739494"	"16"	"0.0001889"	"0.0004657"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNIPYFETSAK"	"[K].nNIPYFETSAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"581.32281"	"1741.95389"	"1741.95251"	"0.80"	"0.00046"	"10/104"	"10"	"104"	"3089696.84564209"	"HCD"	"MS2"	"49.70315"	"142.7"	"100.000"	"44.2751"	"12511"	"12511"	"12486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.6"	""	"169.1"	""	"173.9"	""	"260.5"	"1.8"	"292.0"	"281.5"	""	"969"	"13"	"36.000"	"29.000"	"2.58996432127833"	"20"	"0.0001889"	"0.000964"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLAFLYMDK"	"[K].lPGLAFLYmDk.[N]"	"N-Term(TMT6plex); M9(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"871.50079"	"1741.99431"	"1741.99629"	"-1.13"	"-0.00099"	"8/80"	"8"	"80"	"367033.54876709"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"76.9668"	"25859"	"25859"	"25829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.7"	""	"14.8"	""	"18.3"	""	"87.3"	"0.8"	"52.7"	"49.3"	""	"763"	"40"	"35.000"	"28.000"	"0.00409726960808185"	"17"	"0.0009404"	"0.009713"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLAFLYMDK"	"[K].lPGLAFLYmDk.[N]"	"N-Term(TMT6plex); M9(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"871.50098"	"1741.99468"	"1741.99629"	"-0.92"	"-0.00080"	"7/80"	"7"	"80"	"354144.324279785"	"HCD"	"MS2"	"29.86851"	"27.6"	"100.000"	"76.9796"	"25813"	"25813"	"25789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.4"	""	"20.6"	""	"18.4"	""	"95.5"	"0.2"	"59.8"	"49.4"	""	"752"	"26"	"35.000"	"28.000"	"0.0970929831678608"	"17"	"0.002772"	"0.04447"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSIAAQLLQDPK"	"[R].vSIAAQLLqDPk.[V]"	"N-Term(TMT6plex); Q9(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q99PE7"	"ATP-binding cassette sub-family G member 5 OS=Rattus norvegicus OX=10116 GN=Abcg5 PE=1 SV=3"	"Q99PE7"	"ATP-binding cassette sub-family G member 5 OS=Rattus norvegicus OX=10116 GN=Abcg5 PE=1 SV=3"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"581.34467"	"1742.01944"	"1742.04641"	"-15.48"	"-0.00899"	"11/116"	"11"	"116"	"8689936.42810059"	"HCD"	"MS2"	"60.42675"	"342.9"	"79.808"	"34.0083"	"8365"	"8365"	"8349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"391.4"	""	"378.4"	""	"451.2"	""	"649.0"	""	"707.7"	"680.7"	""	"693"	"9"	"35.000"	"28.000"	"4.20439236686115"	"18"	"0.004346"	"0.1259"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLHMLVDLAK"	"[K].eVLHmLVDLAk.[S]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"581.34729"	"1742.02732"	"1742.02865"	"-0.76"	"-0.00044"	"7/94"	"7"	"94"	"3398703.86767578"	"HCD"	"MS2"	"24.41529"	"111.4"	"100.000"	"55.8313"	"17201"	"17201"	"17179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.8"	""	"116.3"	""	"128.5"	""	"268.3"	"4.3"	"220.4"	"223.5"	""	"618"	"24"	"34.000"	"27.000"	"0.130905676509308"	"17"	"0.0001889"	"0.0007545"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLHMLVDLAK"	"[K].eVLHmLVDLAk.[S]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"581.34735"	"1742.02750"	"1742.02865"	"-0.66"	"-0.00038"	"7/94"	"7"	"94"	"9114776.26025391"	"HCD"	"MS2"	"55.93051"	"217.8"	"100.000"	"55.4998"	"17066"	"17066"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.5"	""	"160.5"	""	"176.0"	""	"780.6"	"6.2"	"395.6"	"392.8"	""	"619"	"31"	"34.000"	"27.000"	"0.0255070746596524"	"20"	"0.0001859"	"0.0003595"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLHMLVDLAK"	"[K].eVLHmLVDLAk.[S]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"581.34741"	"1742.02768"	"1742.02865"	"-0.55"	"-0.00032"	"8/94"	"8"	"94"	"9012201.87927246"	"HCD"	"MS2"	"20.27237"	"219.5"	"100.000"	"55.6875"	"17196"	"17196"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.6"	""	"152.2"	""	"177.1"	""	"785.9"	"2.3"	"403.8"	"396.7"	""	"627"	"36"	"34.000"	"27.000"	"0.0085553453491032"	"19"	"0.0001308"	"0.0002627"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDTVLFGPPLLTR"	"[K].aLDTVLFGPPLLTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.35144"	"1742.03977"	"1742.04137"	"-0.92"	"-0.00053"	"15/124"	"15"	"124"	"2996145.83532715"	"HCD"	"MS2"	"18.58388"	"29.0"	"100.000"	"80.1473"	"27156"	"27156"	"27135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.4"	""	"31.0"	""	"42.7"	""	"45.8"	""	"62.1"	"63.4"	""	"563"	"41"	"34.000"	"27.000"	"0.00229867937537443"	"15"	"0"	"2.629E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDTVLFGPPLLTR"	"[K].aLDTVLFGPPLLTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.52368"	"1742.04009"	"1742.04137"	"-0.74"	"-0.00064"	"7/124"	"7"	"124"	"231870.665100098"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"80.4269"	"27219"	"27219"	"27201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.6"	""	"26.0"	""	"25.7"	""	"31.4"	""	"29.7"	"37.2"	""	"548"	"43"	"34.000"	"27.000"	"0.00132358111758898"	"15"	"0"	"2.203E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDTVLFGPPLLTR"	"[K].aLDTVLFGPPLLTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.52386"	"1742.04045"	"1742.04137"	"-0.53"	"-0.00046"	"8/124"	"8"	"124"	"402351.744384766"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"80.1226"	"27095"	"27095"	"27073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.7"	""	"27.8"	""	"30.3"	""	"41.2"	""	"46.3"	"49.3"	""	"548"	"39"	"34.000"	"27.000"	"0.00322664036744701"	"15"	"0"	"3.942E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDTVLFGPPLLTR"	"[K].aLDTVLFGPPLLTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.35175"	"1742.04068"	"1742.04137"	"-0.40"	"-0.00023"	"14/124"	"14"	"124"	"2922029.44128418"	"HCD"	"MS2"	"18.32741"	"27.4"	"100.000"	"80.1917"	"27123"	"27123"	"27105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.9"	""	"41.0"	""	"39.8"	""	"39.2"	""	"51.9"	"61.7"	""	"538"	"48"	"34.000"	"27.000"	"0.000462117356145392"	"15"	"0"	"1.375E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDTVLFGPPLLTR"	"[K].aLDTVLFGPPLLTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.52399"	"1742.04070"	"1742.04137"	"-0.39"	"-0.00034"	"6/124"	"6"	"124"	"284038.378173828"	"HCD"	"MS2"	"5.374517"	"16.6"	"100.000"	"80.3917"	"27256"	"27256"	"27231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.8"	""	"21.9"	""	"22.3"	""	"26.8"	"1.3"	"27.2"	"31.2"	""	"538"	"17"	"34.000"	"27.000"	"0.581771282882569"	"14"	"0.0001889"	"0.0009292"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDTVLFGPPLLTR"	"[K].aLDTVLFGPPLLTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.52423"	"1742.04119"	"1742.04137"	"-0.11"	"-0.00009"	"8/124"	"8"	"124"	"373554.626342773"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"80.0872"	"27132"	"27132"	"27103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.6"	""	"26.2"	""	"29.0"	""	"36.2"	""	"37.6"	"37.7"	""	"532"	"39"	"34.000"	"27.000"	"0.00339532723143818"	"15"	"0"	"2.116E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDDPLLQLLQK"	"[R].tDDPLLQLLQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.35315"	"1742.04489"	"1742.04641"	"-0.87"	"-0.00050"	"7/92"	"7"	"92"	"1579307.46704102"	"HCD"	"MS2"	"24.08069"	"47.2"	"100.000"	"77.3599"	"25968"	"25968"	"25945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.3"	""	"46.4"	""	"57.1"	""	"88.5"	""	"96.5"	"98.8"	""	"532"	"20"	"34.000"	"27.000"	"0.256378520283976"	"14"	"0.0001308"	"0.0002686"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDDPLLQLLQK"	"[R].tDDPLLQLLQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"581.35333"	"1742.04544"	"1742.04641"	"-0.55"	"-0.00032"	"8/92"	"8"	"92"	"2170007.26092529"	"HCD"	"MS2"	"49.51769"	"54.0"	"100.000"	"77.3057"	"25997"	"25997"	"25973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.6"	""	"57.5"	""	"71.3"	""	"95.0"	"0.3"	"108.3"	"108.9"	""	"534"	"30"	"34.000"	"27.000"	"0.0288078774835364"	"16"	"0"	"4.603E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDDPLLQLLQK"	"[R].tDDPLLQLLQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"871.52673"	"1742.04619"	"1742.04641"	"-0.12"	"-0.00011"	"12/92"	"12"	"92"	"448040.389892578"	"HCD"	"MS2"	"100"	"37.9"	"100.000"	"77.3576"	"25967"	"25967"	"25945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.3"	""	"38.2"	""	"46.2"	""	"78.3"	"1.1"	"76.1"	"64.3"	""	"519"	"25"	"34.000"	"27.000"	"0.0855337203100502"	"21"	"0.000494"	"0.002667"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDPNSGLPK"	"[R].vkDPNSGLPk.[F]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.36353"	"1742.07602"	"1742.07793"	"-1.10"	"-0.00064"	"7/94"	"7"	"94"	"2500304.58618164"	"HCD"	"MS2"	"0"	"166.1"	"100.000"	"32.4211"	"7680"	"7680"	"7656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.0"	""	"211.6"	""	"217.0"	""	"292.9"	""	"326.7"	"293.3"	""	"394"	"7"	"32.000"	"25.000"	"4.29008825153572"	"13"	"0.0001859"	"0.0003434"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDPNSGLPK"	"[R].vkDPNSGLPk.[F]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"1"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"581.36371"	"1742.07657"	"1742.07793"	"-0.78"	"-0.00045"	"8/94"	"8"	"94"	"2154057.72711182"	"HCD"	"MS2"	"8.987388"	"149.1"	"100.000"	"32.5416"	"7772"	"7772"	"7750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"210.5"	""	"175.1"	""	"207.0"	""	"244.5"	""	"286.3"	"290.3"	""	"377"	"12"	"32.000"	"25.000"	"1.18116713490735"	"14"	"0.0001308"	"0.0002664"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKLPTLGAGGK"	"[K].lkLPTLGAGGk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"1"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"581.38812"	"1742.14981"	"1742.15070"	"-0.51"	"-0.00030"	"8/98"	"8"	"98"	"7116167.00805664"	"HCD"	"MS2"	"25.73059"	"338.4"	"100.000"	"45.0043"	"12857"	"12857"	"12827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"425.5"	""	"372.5"	""	"425.0"	""	"620.0"	""	"728.9"	"646.6"	""	"77"	"11"	"25.000"	"18.000"	"0.288045257696794"	"17"	"0.0004166"	"0.002266"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKLPTLGAGGK"	"[K].lkLPTLGAGGk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.38867"	"1742.15146"	"1742.15070"	"0.44"	"0.00025"	"12/98"	"12"	"98"	"11708707.6668091"	"HCD"	"MS2"	"36.51022"	"446.9"	"100.000"	"44.7816"	"12717"	"12717"	"12688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"492.3"	""	"472.6"	""	"592.2"	""	"783.5"	""	"960.1"	"946.9"	""	"73"	"15"	"25.000"	"18.000"	"0.129209029495454"	"13"	"0.0001889"	"0.0009475"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97870"	"1742.95012"	"1742.94859"	"0.88"	"0.00076"	"10/128"	"10"	"128"	"415240.992858887"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"52.0958"	"15745"	"15745"	"15718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.2"	""	"39.5"	""	"35.8"	""	"46.7"	""	"47.9"	"50.1"	""	"1021"	"53"	"37.000"	"30.000"	"0.000261213577043328"	"25"	"0"	"4.694E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97870"	"1742.95012"	"1742.94859"	"0.88"	"0.00076"	"10/128"	"10"	"128"	"415240.992858887"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"52.0958"	"15745"	"15745"	"15718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.2"	""	"39.5"	""	"35.8"	""	"46.7"	""	"47.9"	"50.1"	""	"1021"	"53"	"37.000"	"30.000"	"0.000261213577043328"	"25"	"0"	"4.694E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSPFGTITSAK"	"[K].eFSPFGTITSAk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"581.66235"	"1742.97251"	"1742.97291"	"-0.23"	"-0.00013"	"12/106"	"12"	"106"	"3848431.41516113"	"HCD"	"MS2"	"9.599152"	"133.7"	"100.000"	"56.8621"	"17676"	"17676"	"17653"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.0"	""	"161.6"	""	"173.2"	""	"247.6"	"2.2"	"239.5"	"263.1"	""	"954"	"44"	"36.000"	"29.000"	"0.00205361193204546"	"19"	"0"	"0.0001693"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSPFGTITSAK"	"[K].eFSPFGTITSAk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"581.66254"	"1742.97306"	"1742.97291"	"0.09"	"0.00005"	"12/106"	"12"	"106"	"4607814.22723389"	"HCD"	"MS2"	"5.714973"	"150.5"	"100.000"	"56.6134"	"17520"	"17520"	"17499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.0"	""	"185.1"	""	"188.4"	""	"264.5"	"2.6"	"293.9"	"280.3"	""	"975"	"46"	"36.000"	"29.000"	"0.00135199355101777"	"20"	"0"	"3.683E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSPFGTITSAK"	"[K].eFSPFGTITSAk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"871.99036"	"1742.97344"	"1742.97291"	"0.30"	"0.00026"	"18/106"	"18"	"106"	"1625767.12597656"	"HCD"	"MS2"	"0"	"131.5"	"100.000"	"56.5856"	"17509"	"17509"	"17483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"179.9"	""	"147.8"	""	"159.5"	""	"239.4"	""	"252.6"	"271.1"	""	"974"	"43"	"36.000"	"29.000"	"0.00236880309171742"	"16"	"0"	"6.714E-06"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSPFGTITSAK"	"[K].eFSPFGTITSAk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"871.99048"	"1742.97368"	"1742.97291"	"0.44"	"0.00039"	"10/106"	"10"	"106"	"1730841.58013916"	"HCD"	"MS2"	"0"	"134.7"	"100.000"	"56.7494"	"17630"	"17630"	"17605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.8"	""	"157.5"	""	"147.8"	""	"244.5"	""	"268.3"	"272.7"	""	"963"	"48"	"36.000"	"29.000"	"0.000754390640257074"	"17"	"0"	"4.435E-06"	"1.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDDPLLQLLQK"	"[R].tDDPLLQLLqk.[A]"	"N-Term(TMT6plex); Q10(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"2"	"2"	"0.0606"	"0.0000"	"1"	"1"	"1"	"872.00250"	"1742.99773"	"1743.03042"	"-18.76"	"-0.01635"	"9/92"	"9"	"92"	"600878.179626465"	"HCD"	"MS2"	"60.92236"	"47.4"	"100.000"	"77.2157"	"25960"	"25960"	"25941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.3"	""	"46.2"	""	"48.4"	""	"119.5"	""	"85.7"	"96.3"	""	"835"	"33"	"36.000"	"29.000"	"0.0198909936991261"	"15"	"0.0003839"	"0.001939"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLNSFSTLLK"	"[K].dFLNSFSTLLk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"581.67401"	"1743.00748"	"1743.00929"	"-1.04"	"-0.00060"	"11/108"	"11"	"108"	"535499.083435059"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"82.2753"	"28024"	"28024"	"27998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.0"	""	"32.6"	""	"28.5"	""	"35.4"	""	"32.9"	"33.0"	""	"790"	"44"	"35.000"	"28.000"	"0.00168498909926629"	"19"	"0"	"0.0001163"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLNSFSTLLK"	"[K].dFLNSFSTLLk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"872.00745"	"1743.00762"	"1743.00929"	"-0.96"	"-0.00084"	"11/108"	"11"	"108"	"175189.304016113"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"82.2844"	"28028"	"28028"	"27998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.4"	""	"21.9"	""	"27.8"	""	"22.9"	""	"25.2"	"29.7"	""	"790"	"33"	"35.000"	"28.000"	"0.0197968957282772"	"15"	"0.0001889"	"0.0009323"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLNSFSTLLK"	"[K].dFLNSFSTLLk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"581.67450"	"1743.00895"	"1743.00929"	"-0.20"	"-0.00012"	"13/108"	"13"	"108"	"817909.215576172"	"HCD"	"MS2"	"8.621939"	"26.3"	"100.000"	"82.3264"	"27994"	"27994"	"27968"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.4"	""	"37.2"	""	"42.4"	""	"50.6"	""	"41.7"	"46.7"	""	"760"	"37"	"35.000"	"28.000"	"0.00725744238255171"	"17"	"0"	"9.096E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLNSFSTLLK"	"[K].dFLNSFSTLLk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"872.00818"	"1743.00908"	"1743.00929"	"-0.12"	"-0.00011"	"12/108"	"12"	"108"	"232019.666870117"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"82.3242"	"27993"	"27993"	"27968"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.3"	""	"33.9"	""	"30.9"	""	"36.2"	""	"37.8"	"41.6"	""	"761"	"49"	"35.000"	"28.000"	"0.000499292061576806"	"18"	"7.476E-05"	"0.0001885"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLNSFSTLLK"	"[K].dFLNSFSTLLk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"581.67468"	"1743.00949"	"1743.00929"	"0.12"	"0.00007"	"9/108"	"9"	"108"	"263868.721130371"	"HCD"	"MS2"	"6.937806"	"12.0"	"100.000"	"82.5959"	"28155"	"28155"	"28125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.9"	""	"12.7"	""	"15.0"	""	"18.6"	""	"27.1"	"25.4"	""	"756"	"40"	"35.000"	"28.000"	"0.00415424207305493"	"18"	"0.0001859"	"0.000346"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDQLVILDMK"	"[R].iPDQLVILDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"581.68695"	"1743.04630"	"1743.04905"	"-1.58"	"-0.00092"	"7/106"	"7"	"106"	"7499493.92614746"	"HCD"	"MS2"	"7.170126"	"190.7"	"100.000"	"74.8589"	"25010"	"25010"	"24991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.2"	""	"247.5"	""	"234.8"	""	"296.8"	"1.0"	"393.2"	"419.3"	""	"541"	"51"	"34.000"	"27.000"	"0.000236138755148984"	"22"	"0"	"6.205E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDQLVILDMK"	"[R].iPDQLVILDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"872.02734"	"1743.04741"	"1743.04905"	"-0.94"	"-0.00082"	"8/106"	"8"	"106"	"1735502.85552979"	"HCD"	"MS2"	"0"	"94.6"	"100.000"	"74.8175"	"24993"	"24993"	"24975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.6"	""	"116.4"	""	"120.6"	""	"151.7"	"1.7"	"184.0"	"204.2"	""	"534"	"55"	"34.000"	"27.000"	"8.06327109347339E-05"	"19"	"0"	"2.151E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDQLVILDMK"	"[R].iPDQLVILDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"872.02759"	"1743.04790"	"1743.04905"	"-0.66"	"-0.00058"	"8/106"	"8"	"106"	"1965466.49768066"	"HCD"	"MS2"	"5.342278"	"101.2"	"100.000"	"74.8386"	"24950"	"24950"	"24929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.3"	""	"131.4"	""	"124.0"	""	"163.6"	"0.0"	"218.1"	"198.3"	""	"534"	"58"	"34.000"	"27.000"	"4.06922085263877E-05"	"16"	"0"	"3.376E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDQLVILDMK"	"[R].iPDQLVILDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"872.02777"	"1743.04827"	"1743.04905"	"-0.45"	"-0.00039"	"8/106"	"8"	"106"	"497773.458435059"	"HCD"	"MS2"	"4.507845"	"33.0"	"100.000"	"75.1406"	"25125"	"25125"	"25103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.4"	""	"46.3"	""	"42.2"	""	"46.7"	"0.6"	"73.0"	"73.8"	""	"536"	"60"	"34.000"	"27.000"	"2.98630935002584E-05"	"20"	"0"	"9.292E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDQLVILDMK"	"[R].iPDQLVILDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"581.68762"	"1743.04831"	"1743.04905"	"-0.42"	"-0.00025"	"14/106"	"14"	"106"	"5639439.38360596"	"HCD"	"MS2"	"10.26665"	"150.5"	"100.000"	"74.8339"	"24948"	"24948"	"24929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.3"	""	"183.0"	""	"209.9"	""	"255.0"	"2.6"	"291.4"	"301.4"	""	"536"	"55"	"34.000"	"27.000"	"9.48712874103605E-05"	"24"	"0"	"3.956E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVNPNKPATK"	"[R].sVNPNkPATk.[D]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80WE1"	"Synaptic functional regulator FMR1 OS=Rattus norvegicus OX=10116 GN=Fmr1 PE=1 SV=2"	"Q80WE1"	"Synaptic functional regulator FMR1 OS=Rattus norvegicus OX=10116 GN=Fmr1 PE=1 SV=2"	"0"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"581.69482"	"1743.06992"	"1743.07318"	"-1.87"	"-0.00109"	"7/102"	"7"	"102"	"627348.976196289"	"HCD"	"MS2"	"38.90948"	"49.8"	"100.000"	"26.9698"	"5499"	"5499"	"5476"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.1"	""	"60.7"	""	"59.6"	""	"87.0"	""	"109.7"	"90.9"	""	"436"	"13"	"33.000"	"26.000"	"1.02201317307668"	"19"	"0.0002277"	"0.001259"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVNPNKPATK"	"[R].sVNPNkPATk.[D]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80WE1"	"Synaptic functional regulator FMR1 OS=Rattus norvegicus OX=10116 GN=Fmr1 PE=1 SV=2"	"Q80WE1"	"Synaptic functional regulator FMR1 OS=Rattus norvegicus OX=10116 GN=Fmr1 PE=1 SV=2"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"581.69574"	"1743.07267"	"1743.07318"	"-0.29"	"-0.00017"	"6/102"	"6"	"102"	"693463.831420898"	"HCD"	"MS2"	"0"	"55.7"	"100.000"	"27.0672"	"5574"	"5574"	"5557"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.1"	""	"65.2"	""	"73.7"	""	"101.8"	""	"111.2"	"103.3"	""	"398"	"8"	"32.000"	"25.000"	"3.37950486839888"	"18"	"0.0001889"	"0.0007187"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLNSFSTLLK"	"[K].dFLnSFSTLLk.[Q]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"872.49927"	"1743.99126"	"1743.99331"	"-1.18"	"-0.00103"	"6/108"	"6"	"108"	"110956.684082031"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"78.5224"	"26494"	"26494"	"26463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.4"	""	"12.6"	""	"12.1"	""	"13.3"	""	"19.7"	"19.0"	""	"910"	"9"	"36.000"	"29.000"	"5.15242165272178"	"13"	"0.001846"	"0.02537"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGKYDLDFK"	"[R].aGkYDLDFk.[S]"	"N-Term(TMT6plex); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.01276"	"1744.02372"	"1744.02483"	"-0.64"	"-0.00037"	"7/80"	"7"	"80"	"13197551.1807861"	"HCD"	"MS2"	"14.08832"	"651.9"	"66.411"	"40.9746"	"11217"	"11217"	"11197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1571.4"	""	"1200.7"	""	"1187.6"	""	"611.1"	"11.9"	"758.5"	"788.3"	""	"741"	"3"	"35.000"	"28.000"	"20.643731997928"	"13"	"0.000494"	"0.002653"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVQDLQQAISK"	"[R].gVVQDLQQAISk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"872.52246"	"1744.03765"	"1744.03690"	"0.42"	"0.00037"	"17/116"	"17"	"116"	"936868.914123535"	"HCD"	"MS2"	"0"	"79.7"	"100.000"	"57.0592"	"17703"	"17703"	"17675"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.5"	""	"83.3"	""	"90.6"	""	"148.8"	""	"174.8"	"163.7"	""	"651"	"47"	"35.000"	"28.000"	"0.000675384349931574"	"26"	"0"	"1.77E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVQDLQQAISK"	"[R].gVVQDLQQAISk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"872.52271"	"1744.03813"	"1744.03690"	"0.70"	"0.00061"	"10/116"	"10"	"116"	"869407.32409668"	"HCD"	"MS2"	"13.40216"	"67.9"	"100.000"	"57.1939"	"17812"	"17812"	"17781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.9"	""	"79.5"	""	"69.1"	""	"121.7"	"3.2"	"141.8"	"140.7"	""	"644"	"77"	"35.000"	"28.000"	"6.58955173025344E-07"	"28"	"0"	"1.858E-06"	"1.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KHGVYNPNK"	"[K].kHGVYNPNk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.02032"	"1744.04642"	"1744.04730"	"-0.50"	"-0.00029"	"6/82"	"6"	"82"	"1427197.69836426"	"HCD"	"MS2"	"0"	"86.0"	"100.000"	"24.3891"	"4450"	"4450"	"4421"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.4"	""	"116.7"	""	"132.5"	""	"130.0"	"3.0"	"144.9"	"146.5"	""	"632"	"21"	"34.000"	"28.000"	"0.24081696716803"	"14"	"0"	"0.0001321"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KHGVYNPNK"	"[K].kHGVYNPNk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.02069"	"1744.04752"	"1744.04730"	"0.13"	"0.00007"	"7/82"	"7"	"82"	"1484212.86383057"	"HCD"	"MS2"	"17.49383"	"90.5"	"100.000"	"24.4598"	"4513"	"4513"	"4488"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.4"	""	"118.9"	""	"140.5"	""	"142.3"	"0.1"	"160.0"	"148.8"	""	"614"	"13"	"34.000"	"27.000"	"1.4693943834305"	"13"	"0.0001308"	"0.0002088"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQATVVAVGSGGK"	"[K].vLQATVVAVGSGGk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"872.53961"	"1744.07195"	"1744.07329"	"-0.77"	"-0.00067"	"12/138"	"12"	"138"	"457886.722839355"	"HCD"	"MS2"	"0"	"37.7"	"100.000"	"49.6522"	"14749"	"14749"	"14718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.8"	""	"48.7"	""	"53.0"	""	"75.0"	"0.8"	"70.5"	"74.2"	""	"457"	"80"	"33.000"	"26.000"	"2.50545267818718E-07"	""	"0"	"2.415E-06"	"1.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGTQALSGAGLLK"	"[R].aVGTQALSGAGLLk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"582.02893"	"1744.07224"	"1744.07329"	"-0.60"	"-0.00035"	"11/130"	"11"	"130"	"7031145.50372314"	"HCD"	"MS2"	"16.94589"	"241.4"	"100.000"	"51.6035"	"15493"	"15493"	"15474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"323.8"	""	"335.9"	""	"350.8"	""	"376.1"	"12.6"	"449.9"	"438.6"	""	"457"	"36"	"33.000"	"26.000"	"0.00517471224285014"	"16"	"0"	"1.145E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGTQALSGAGLLK"	"[R].aVGTQALSGAGLLk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"872.53986"	"1744.07244"	"1744.07329"	"-0.49"	"-0.00043"	"23/130"	"23"	"130"	"1311641.987854"	"HCD"	"MS2"	"8.468244"	"107.9"	"100.000"	"51.5737"	"15481"	"15481"	"15458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.5"	""	"142.2"	""	"157.5"	""	"179.9"	"0.1"	"187.1"	"198.2"	""	"457"	"108"	"33.000"	"26.000"	"3.53090639434528E-10"	""	"0"	"7.37E-08"	"1.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQATVVAVGSGGK"	"[K].vLQATVVAVGSGGk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.02917"	"1744.07297"	"1744.07329"	"-0.18"	"-0.00011"	"15/138"	"15"	"138"	"3815188.83599854"	"HCD"	"MS2"	"73.37128"	"174.7"	"100.000"	"49.6871"	"14763"	"14763"	"14734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"264.1"	""	"233.7"	""	"267.9"	""	"281.1"	"3.4"	"301.9"	"301.1"	""	"457"	"36"	"33.000"	"26.000"	"0.00559610950761525"	"15"	"0"	"2.974E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGTQALSGAGLLK"	"[R].aVGTQALSGAGLLk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9151"	"0.0000"	"1"	"1"	"1"	"872.54041"	"1744.07353"	"1744.07329"	"0.14"	"0.00012"	"12/130"	"12"	"130"	"1286370.59747314"	"HCD"	"MS2"	"0"	"101.0"	"100.000"	"51.7460"	"15602"	"15602"	"15574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.1"	""	"141.5"	""	"129.7"	""	"177.8"	""	"199.0"	"178.1"	""	"455"	"106"	"33.000"	"26.000"	"5.68828569785938E-10"	""	"0"	"6.722E-08"	"1.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVGTQALSGAGLLK"	"[R].aVGTQALSGAGLLk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"582.02966"	"1744.07444"	"1744.07329"	"0.66"	"0.00038"	"9/130"	"9"	"130"	"7022670.5960083"	"HCD"	"MS2"	"15.66435"	"217.3"	"100.000"	"51.8082"	"15627"	"15627"	"15606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.2"	""	"309.3"	""	"312.7"	""	"350.9"	"5.7"	"376.6"	"410.5"	""	"441"	"68"	"33.000"	"26.000"	"3.27648809124285E-06"	"26"	"0"	"5.05E-06"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPNGVIk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"582.03015"	"1744.07590"	"1744.07731"	"-0.81"	"-0.00047"	"13/96"	"13"	"96"	"8263336.84539795"	"HCD"	"MS2"	"65.87598"	"173.0"	"100.000"	"73.7197"	"24545"	"24545"	"24527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.1"	""	"253.1"	""	"278.8"	""	"246.8"	"3.4"	"289.4"	"315.9"	""	"452"	"38"	"33.000"	"26.000"	"0.00386463461210405"	"17"	"0"	"3.706E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPNGVIk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"872.54163"	"1744.07598"	"1744.07731"	"-0.77"	"-0.00067"	"10/96"	"10"	"96"	"2126061.79071045"	"HCD"	"MS2"	"41.65864"	"127.3"	"100.000"	"73.6805"	"24529"	"24529"	"24511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.7"	""	"175.8"	""	"185.6"	""	"186.6"	"0.2"	"200.3"	"256.2"	""	"452"	"66"	"33.000"	"26.000"	"5.8899070229975E-06"	"25"	"0"	"6.594E-06"	"1.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPNGVIk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"582.03052"	"1744.07700"	"1744.07731"	"-0.18"	"-0.00010"	"15/96"	"15"	"96"	"8376816.89520264"	"HCD"	"MS2"	"25.30596"	"194.0"	"100.000"	"73.7683"	"24514"	"24514"	"24497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.6"	""	"285.5"	""	"292.8"	""	"286.4"	"0.7"	"335.3"	"359.7"	""	"432"	"41"	"33.000"	"26.000"	"0.0018132335708819"	"19"	"0"	"0.0001652"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPNGVIk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"872.54218"	"1744.07707"	"1744.07731"	"-0.14"	"-0.00012"	"12/96"	"12"	"96"	"1948343.3651123"	"HCD"	"MS2"	"42.8877"	"126.4"	"100.000"	"73.6943"	"24483"	"24483"	"24465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.9"	""	"182.2"	""	"196.5"	""	"183.8"	""	"212.3"	"234.0"	""	"432"	"35"	"33.000"	"26.000"	"0.00742085167463729"	"20"	"0"	"0.0001509"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKLPNTVLGK"	"[K].skLPNTVLGk.[I]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"1"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"582.04785"	"1744.12900"	"1744.12997"	"-0.55"	"-0.00032"	"6/98"	"6"	"98"	"25079773.2259521"	"HCD"	"MS2"	"13.29338"	"1211.3"	"100.000"	"37.7474"	"9896"	"9896"	"9873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2254.4"	""	"1798.2"	""	"2049.3"	""	"1774.2"	"7.8"	"1721.0"	"1823.4"	""	"146"	"30"	"28.000"	"21.000"	"0.00690753127797029"	"18"	"0"	"5.426E-05"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKLPNTVLGK"	"[K].skLPNTVLGk.[I]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"1"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"582.04816"	"1744.12992"	"1744.12997"	"-0.03"	"-0.00002"	"9/98"	"9"	"98"	"26899347.3267212"	"HCD"	"MS2"	"6.985196"	"1124.3"	"83.534"	"37.6682"	"9820"	"9820"	"9800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2059.9"	""	"1666.1"	""	"1916.9"	""	"1626.0"	"0.5"	"1617.3"	"1723.0"	""	"144"	"23"	"28.000"	"21.000"	"0.0332148653683473"	"17"	"0"	"0.000123"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"436.98254"	"1744.90835"	"1744.91209"	"-2.15"	"-0.00094"	"9/94"	"9"	"94"	"7978136.00909424"	"HCD"	"MS2"	"21.05592"	"162.0"	"100.000"	"37.0994"	"9587"	"9587"	"9562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.2"	""	"206.2"	""	"223.4"	""	"260.2"	""	"330.6"	"325.8"	""	"944"	"15"	"36.000"	"29.000"	"1.37385847972744"	"13"	"0.001454"	"0.02009"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"0.7273"	"0.0000"	"1"	"1"	"1"	"436.98257"	"1744.90847"	"1744.91209"	"-2.08"	"-0.00091"	"9/94"	"9"	"94"	"6371615.55645752"	"HCD"	"MS2"	"24.13355"	"118.2"	"96.839"	"37.2204"	"9680"	"9680"	"9654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.5"	""	"137.1"	""	"168.3"	""	"188.2"	""	"234.0"	"247.2"	""	"944"	"22"	"36.000"	"29.000"	"0.305451314633331"	"20"	"0.0006037"	"0.00544"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"0.8696"	"0.0000"	"1"	"1"	"1"	"436.98260"	"1744.90859"	"1744.91209"	"-2.01"	"-0.00087"	"4/94"	"4"	"94"	"45079424.2843018"	"HCD"	"MS2"	"18.28809"	"278.8"	"100.000"	"36.5556"	"9407"	"9407"	"9385"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.9"	""	"342.6"	""	"349.4"	""	"510.9"	""	"566.9"	"581.4"	""	"933"	"23"	"36.000"	"29.000"	"0.25342627964122"	"17"	"0.0001889"	"0.0007107"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"0.7826"	"0.0000"	"1"	"1"	"1"	"436.98279"	"1744.90932"	"1744.91209"	"-1.59"	"-0.00069"	"4/94"	"4"	"94"	"56349064.2784424"	"HCD"	"MS2"	"0"	"298.3"	"100.000"	"36.4801"	"9333"	"9333"	"9306"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"317.7"	""	"379.5"	""	"381.2"	""	"542.9"	"3.8"	"591.1"	"616.5"	""	"933"	"23"	"36.000"	"29.000"	"0.240908236265421"	"19"	"0.0001889"	"0.0005296"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"582.30823"	"1744.91013"	"1744.91209"	"-1.12"	"-0.00065"	"8/94"	"8"	"94"	"47148050.7629395"	"HCD"	"MS2"	"8.325508"	"234.5"	"32.474"	"36.5053"	"9343"	"9343"	"9322"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.0"	""	"280.2"	""	"320.7"	""	"390.5"	"0.0"	"466.4"	"482.3"	""	"930"	"46"	"36.000"	"29.000"	"0.00117071977140787"	"19"	"0"	"9.928E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"582.30841"	"1744.91068"	"1744.91209"	"-0.81"	"-0.00047"	"9/94"	"9"	"94"	"31057132.5401001"	"HCD"	"MS2"	"9.967636"	"323.4"	"75.607"	"36.5877"	"9420"	"9420"	"9401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"363.6"	""	"409.3"	""	"415.5"	""	"540.3"	""	"658.4"	"685.7"	""	"939"	"32"	"36.000"	"29.000"	"0.0316690909004174"	"16"	"0.0001859"	"0.0003707"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"872.95929"	"1744.91130"	"1744.91209"	"-0.45"	"-0.00039"	"9/94"	"9"	"94"	"1454142.78070068"	"HCD"	"MS2"	"0"	"55.3"	"100.000"	"36.5605"	"9366"	"9366"	"9338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.1"	""	"65.7"	""	"68.0"	""	"95.8"	""	"111.4"	"122.3"	""	"934"	"35"	"36.000"	"29.000"	"0.0139417368303469"	"16"	"0.0001308"	"0.0002234"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"0.8000"	"0.0000"	"1"	"1"	"1"	"436.98334"	"1744.91152"	"1744.91209"	"-0.33"	"-0.00014"	"4/94"	"4"	"94"	"88310564.5947266"	"HCD"	"MS2"	"2.343936"	"57.0"	"11.094"	"36.7671"	"9451"	"9451"	"9434"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.7"	""	"80.2"	""	"66.6"	""	"88.1"	""	"116.9"	"126.1"	""	"930"	"25"	"36.000"	"29.000"	"0.132877960266935"	"19"	"0.0003839"	"0.0016"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"872.95959"	"1744.91191"	"1744.91209"	"-0.10"	"-0.00009"	"9/94"	"9"	"94"	"1679935.05847168"	"HCD"	"MS2"	"0"	"64.2"	"100.000"	"36.6335"	"9439"	"9439"	"9415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.8"	""	"71.7"	""	"74.2"	""	"115.0"	""	"142.9"	"144.8"	""	"942"	"27"	"36.000"	"29.000"	"0.0909957077314971"	"14"	"0.0001859"	"0.0003602"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYNELR.[V]"	"N-Term(TMT6plex)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"0.8000"	"0.0000"	"1"	"1"	"1"	"436.98370"	"1744.91298"	"1744.91209"	"0.51"	"0.00022"	"4/94"	"4"	"94"	"120109682.876953"	"HCD"	"MS2"	"1.980151"	"67.4"	"10.271"	"36.8468"	"9527"	"9527"	"9510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.2"	""	"72.3"	""	"84.6"	""	"119.2"	"4.2"	"146.8"	"141.5"	""	"939"	"25"	"36.000"	"29.000"	"0.134473155687114"	"20"	"0.0002277"	"0.001318"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLMDTLFNTK"	"[K].sTLmDTLFNTk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"872.98175"	"1744.95622"	"1744.95554"	"0.39"	"0.00034"	"14/102"	"14"	"102"	"384619.020202637"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"51.1591"	"15312"	"15312"	"15282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.2"	""	"39.9"	""	"60.8"	""	"77.9"	""	"73.3"	"79.6"	""	"1080"	"34"	"37.000"	"30.000"	"0.0193817844708303"	"15"	"0.0004166"	"0.002118"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLMDTLFNTK"	"[K].sTLmDTLFNTk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"872.98212"	"1744.95696"	"1744.95554"	"0.81"	"0.00071"	"13/102"	"13"	"102"	"363281.783874512"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"51.3614"	"15445"	"15445"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.7"	""	"32.7"	""	"55.9"	""	"73.8"	"0.2"	"67.1"	"67.2"	""	"1073"	"34"	"37.000"	"30.000"	"0.0200248709657404"	"15"	"0.0002277"	"0.001291"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPMTLELLQSTR"	"[K].nIPMTLELLQSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLL0"	"Transcription elongation factor A protein 1 OS=Rattus norvegicus OX=10116 GN=Tcea1 PE=1 SV=1"	"Q4KLL0"	"Transcription elongation factor A protein 1 OS=Rattus norvegicus OX=10116 GN=Tcea1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"872.99652"	"1744.98577"	"1744.98287"	"1.66"	"0.00145"	"16/134"	"16"	"134"	"301474.005249023"	"HCD"	"MS2"	"19.52296"	"21.2"	"100.000"	"68.0605"	"22184"	"22184"	"22154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.8"	""	"25.9"	""	"29.8"	""	"31.4"	""	"42.2"	"46.0"	""	"1026"	"32"	"37.000"	"30.000"	"0.0325924768039944"	"24"	"0.0001889"	"0.0007954"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMLESIGVPLEK"	"[K].aMLESIGVPLEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"582.34753"	"1745.02805"	"1745.02831"	"-0.15"	"-0.00009"	"12/102"	"12"	"102"	"2954791.06445313"	"HCD"	"MS2"	"8.610044"	"92.0"	"100.000"	"63.9478"	"20512"	"20512"	"20489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.3"	""	"145.1"	""	"131.9"	""	"127.1"	"2.9"	"167.9"	"161.2"	""	"814"	"52"	"36.000"	"29.000"	"0.000240211839629941"	"20"	"0"	"3.123E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMLESIGVPLEK"	"[K].aMLESIGVPLEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"582.34778"	"1745.02878"	"1745.02831"	"0.27"	"0.00016"	"11/102"	"11"	"102"	"3169456.67144775"	"HCD"	"MS2"	"6.791355"	"87.0"	"100.000"	"63.9992"	"20586"	"20586"	"20563"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.4"	""	"137.0"	""	"142.0"	""	"131.1"	""	"147.3"	"152.3"	""	"824"	"48"	"36.000"	"29.000"	"0.000585999460294602"	"19"	"0"	"3.487E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLSSETPIEGK"	"[K].lLLSSETPIEGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.35242"	"1745.04270"	"1745.04607"	"-1.93"	"-0.00112"	"13/100"	"13"	"100"	"3591123.58172607"	"HCD"	"MS2"	"26.72438"	"159.0"	"100.000"	"54.3000"	"16575"	"16575"	"16554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.8"	"3.5"	"211.9"	""	"225.9"	""	"248.6"	""	"295.3"	"304.0"	""	"700"	"26"	"35.000"	"28.000"	"0.0897569412781201"	"14"	"0.0001308"	"0.0002439"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLSSETPIEGK"	"[K].lLLSSETPIEGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"873.02539"	"1745.04350"	"1745.04607"	"-1.47"	"-0.00128"	"9/100"	"9"	"100"	"1051294.54034424"	"HCD"	"MS2"	"0"	"82.3"	"100.000"	"54.1739"	"16524"	"16524"	"16493"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.3"	""	"106.8"	""	"126.4"	""	"125.1"	""	"152.3"	"150.1"	""	"694"	"42"	"35.000"	"28.000"	"0.00213466374830324"	"24"	"0"	"2.367E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLSSETPIEGK"	"[K].lLLSSETPIEGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"873.02576"	"1745.04424"	"1745.04607"	"-1.05"	"-0.00092"	"9/100"	"9"	"100"	"872264.507324219"	"HCD"	"MS2"	"0"	"67.8"	"100.000"	"54.3343"	"16642"	"16642"	"16621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.0"	""	"87.2"	""	"94.2"	""	"117.9"	""	"126.6"	"130.7"	""	"692"	"63"	"35.000"	"28.000"	"1.79504813469421E-05"	""	"0"	"9.43E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPnGVIk.[H]"	"N-Term(TMT6plex); N8(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"582.35760"	"1745.05826"	"1745.06133"	"-1.76"	"-0.00102"	"12/96"	"12"	"96"	"614185.786437988"	"HCD"	"MS2"	"0"	"27.8"	"100.000"	"75.7250"	"25312"	"25312"	"25281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.9"	""	"40.2"	""	"38.3"	""	"42.3"	""	"47.6"	"62.5"	""	"544"	"25"	"34.000"	"27.000"	"0.0904833984959692"	"16"	"0.0001889"	"0.0007033"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTLLGAEANLGK"	"[K].lSTLLGAEANLGk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"873.03284"	"1745.05840"	"1745.05731"	"0.63"	"0.00055"	"11/114"	"11"	"114"	"435000.937194824"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"65.6116"	"21192"	"21192"	"21161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.1"	""	"56.8"	""	"50.1"	""	"56.3"	"0.2"	"61.5"	"57.6"	""	"542"	"88"	"34.000"	"27.000"	"4.3548107956649E-08"	""	"0"	"9.864E-07"	"1.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPnGVIk.[H]"	"N-Term(TMT6plex); N8(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8194"	"0.0000"	"1"	"1"	"1"	"873.03302"	"1745.05876"	"1745.06133"	"-1.47"	"-0.00128"	"16/96"	"16"	"96"	"1106770.17663574"	"HCD"	"MS2"	"15.28215"	"72.0"	"100.000"	"74.0448"	"24678"	"24678"	"24655"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.8"	""	"105.3"	""	"107.2"	""	"104.8"	"2.4"	"134.1"	"135.9"	""	"546"	"72"	"34.000"	"27.000"	"1.65258058807818E-06"	""	"0"	"7.274E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPnGVIk.[H]"	"N-Term(TMT6plex); N8(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"3"	"3"	"0.7447"	"0.0000"	"1"	"1"	"1"	"582.35797"	"1745.05936"	"1745.06133"	"-1.13"	"-0.00066"	"9/96"	"9"	"96"	"1570857.69268799"	"HCD"	"MS2"	"11.52376"	"44.9"	"100.000"	"76.3292"	"25604"	"25604"	"25583"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.9"	""	"64.5"	""	"63.3"	""	"75.1"	"0.5"	"79.3"	"83.5"	""	"563"	"47"	"34.000"	"27.000"	"0.000581404513860663"	""	"0"	"0.0001046"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPnGVIk.[H]"	"N-Term(TMT6plex); N8(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"873.03339"	"1745.05950"	"1745.06133"	"-1.05"	"-0.00092"	"14/96"	"14"	"96"	"589176.916625977"	"HCD"	"MS2"	"18.39398"	"39.7"	"100.000"	"76.3315"	"25605"	"25605"	"25583"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.7"	""	"54.8"	""	"55.2"	""	"66.8"	""	"78.3"	"73.8"	""	"563"	"53"	"34.000"	"27.000"	"0.000138190567136958"	"26"	"0"	"6.427E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPnGVIk.[H]"	"N-Term(TMT6plex); N8(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"582.35809"	"1745.05973"	"1745.06133"	"-0.92"	"-0.00053"	"11/96"	"11"	"96"	"2073363.02166748"	"HCD"	"MS2"	"13.5082"	"51.5"	"100.000"	"76.4678"	"25610"	"25610"	"25585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.2"	""	"63.6"	""	"77.6"	""	"91.3"	""	"99.9"	"96.0"	""	"563"	"40"	"34.000"	"27.000"	"0.00278919192487314"	"27"	"0.0001308"	"0.0002758"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTLLGAEANLGK"	"[K].lSTLLGAEANLGk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"873.03375"	"1745.06023"	"1745.05731"	"1.67"	"0.00146"	"17/114"	"17"	"114"	"778009.386535645"	"HCD"	"MS2"	"0"	"57.6"	"100.000"	"65.3016"	"21118"	"21118"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.3"	""	"82.2"	""	"86.4"	""	"90.8"	""	"119.7"	"99.5"	""	"568"	"27"	"34.000"	"27.000"	"0.058656796425019"	"24"	"0"	"0.0001328"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPnGVIk.[H]"	"N-Term(TMT6plex); N8(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"873.03381"	"1745.06035"	"1745.06133"	"-0.56"	"-0.00049"	"15/96"	"15"	"96"	"774235.62097168"	"HCD"	"MS2"	"0"	"49.6"	"100.000"	"76.4216"	"25591"	"25591"	"25569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.1"	""	"59.2"	""	"73.4"	""	"89.2"	""	"88.5"	"95.8"	""	"568"	"61"	"34.000"	"27.000"	"2.42280432380996E-05"	"26"	"0"	"7.435E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTLLGAEANLGK"	"[K].lSTLLGAEANLGk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"582.35840"	"1745.06064"	"1745.05731"	"1.91"	"0.00111"	"10/114"	"10"	"114"	"2483921.20263672"	"HCD"	"MS2"	"0"	"76.6"	"100.000"	"65.3107"	"21122"	"21122"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.7"	""	"105.5"	""	"102.0"	""	"117.6"	""	"150.2"	"138.7"	""	"557"	"38"	"34.000"	"27.000"	"0.00409095968323817"	"23"	"0"	"4.936E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPnGVIk.[H]"	"N-Term(TMT6plex); N8(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"873.03418"	"1745.06108"	"1745.06133"	"-0.14"	"-0.00012"	"11/96"	"11"	"96"	"893559.303222656"	"HCD"	"MS2"	"0"	"63.5"	"100.000"	"74.0935"	"24646"	"24646"	"24625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.5"	""	"77.7"	""	"102.6"	""	"96.9"	"0.2"	"121.4"	"120.7"	""	"555"	"44"	"34.000"	"27.000"	"0.00123101398690973"	"23"	"0.0001308"	"0.0002717"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPnGVIk.[H]"	"N-Term(TMT6plex); N8(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"582.35901"	"1745.06247"	"1745.06133"	"0.66"	"0.00038"	"10/96"	"10"	"96"	"706627.120422363"	"HCD"	"MS2"	"12.30603"	"29.8"	"100.000"	"75.7103"	"25358"	"25358"	"25327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.0"	""	"38.3"	""	"44.3"	""	"47.3"	""	"56.4"	"55.7"	""	"543"	"27"	"34.000"	"27.000"	"0.058313597372644"	"22"	"0.0001889"	"0.0007687"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDPNGVIK"	"[R].gLFIIDPnGVIk.[H]"	"N-Term(TMT6plex); N8(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.7288"	"0.0000"	"1"	"1"	"1"	"873.04108"	"1745.07488"	"1745.06133"	"7.76"	"0.00677"	"13/96"	"13"	"96"	"1123359.70025635"	"HCD"	"MS2"	"17.27003"	"77.3"	"100.000"	"74.0151"	"24614"	"24614"	"24593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.6"	""	"96.1"	""	"110.2"	""	"122.9"	""	"138.9"	"141.5"	""	"421"	"59"	"33.000"	"26.000"	"2.82001942703159E-05"	""	"0.0001889"	"0.0008415"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGPEGPYGVFAGR"	"[K].fYGPEGPYGVFAGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"873.44470"	"1745.88213"	"1745.88487"	"-1.57"	"-0.00137"	"12/104"	"12"	"104"	"1600338.4309082"	"HCD"	"MS2"	"37.68668"	"87.9"	"100.000"	"59.7493"	"18851"	"18851"	"18821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.4"	""	"93.7"	""	"125.3"	""	"170.3"	"1.9"	"180.1"	"163.1"	""	"920"	"41"	"36.000"	"29.000"	"0.0035380000253184"	"20"	"7.476E-05"	"0.0001936"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGPEGPYGVFAGR"	"[K].fYGPEGPYGVFAGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"873.44476"	"1745.88225"	"1745.88487"	"-1.50"	"-0.00131"	"15/104"	"15"	"104"	"496568.099914551"	"HCD"	"MS2"	"0"	"40.5"	"100.000"	"60.0758"	"18984"	"18984"	"18964"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.3"	""	"54.3"	""	"59.8"	"2.2"	"61.2"	""	"65.4"	"83.1"	""	"918"	"11"	"36.000"	"29.000"	"3.65437141841549"	"15"	"0.0005564"	"0.003625"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGPEGPYGVFAGR"	"[K].fYGPEGPYGVFAGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"582.63348"	"1745.88590"	"1745.88487"	"0.59"	"0.00034"	"15/104"	"15"	"104"	"4946931.08441162"	"HCD"	"MS2"	"43.66575"	"128.1"	"100.000"	"59.7217"	"18786"	"18786"	"18761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.0"	""	"146.8"	""	"181.0"	""	"233.2"	"0.6"	"249.6"	"217.4"	""	"949"	"17"	"36.000"	"29.000"	"0.925201262585192"	"14"	"0.0001889"	"0.0005301"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGPEGPYGVFAGR"	"[K].fYGPEGPYGVFAGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"873.44727"	"1745.88725"	"1745.88487"	"1.36"	"0.00119"	"12/104"	"12"	"104"	"1728240.04962158"	"HCD"	"MS2"	"38.4568"	"109.1"	"100.000"	"59.6091"	"18740"	"18740"	"18713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.9"	""	"111.2"	""	"156.9"	""	"209.9"	""	"227.9"	"206.4"	""	"975"	"37"	"36.000"	"29.000"	"0.0104465916804603"	"23"	"0"	"4.487E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFEVDFPMIVTR"	"[K].yFEVDFPMIVTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P4Z6"	"Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lcmt1 PE=2 SV=1"	"Q6P4Z6"	"Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lcmt1 PE=2 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"873.45941"	"1745.91155"	"1745.91339"	"-1.06"	"-0.00092"	"6/104"	"6"	"104"	"196404.843322754"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"80.1587"	"27161"	"27161"	"27135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.7"	""	"19.2"	""	"18.3"	""	"18.3"	""	"20.2"	"24.2"	""	"1022"	"28"	"37.000"	"30.000"	"0.0867802506407951"	"17"	"0.0006037"	"0.004139"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].iWHHTFYnELR.[V]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"4"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"0.6923"	"0.0000"	"1"	"1"	"1"	"437.23383"	"1745.91347"	"1745.89611"	"9.95"	"0.00434"	"6/94"	"6"	"94"	"5160176.54296875"	"HCD"	"MS2"	"0"	"111.2"	"95.111"	"37.1750"	"9618"	"9618"	"9594"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.4"	""	"152.9"	""	"146.7"	""	"173.0"	""	"222.0"	"220.0"	""	"1061"	"13"	"37.000"	"30.000"	"2.97635951285226"	"18"	"0.005353"	"0.1672"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFEVDFPMIVTR"	"[K].yFEVDFPMIVTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P4Z6"	"Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lcmt1 PE=2 SV=1"	"Q6P4Z6"	"Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lcmt1 PE=2 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"873.46039"	"1745.91350"	"1745.91339"	"0.06"	"0.00005"	"7/104"	"7"	"104"	"175470.518920898"	"HCD"	"MS2"	"26.88311"	"13.9"	"100.000"	"80.1733"	"27116"	"27116"	"27089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.2"	""	"25.1"	""	"23.3"	""	"18.6"	""	"28.6"	"20.9"	""	"1061"	"17"	"37.000"	"30.000"	"1.17404674344579"	"15"	"0.001557"	"0.02078"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSDVYPDGFK"	"[K].fLSDVYPDGFk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"582.65417"	"1745.94797"	"1745.95144"	"-1.99"	"-0.00116"	"12/90"	"12"	"90"	"3157643.26300049"	"HCD"	"MS2"	"2.486564"	"95.4"	"100.000"	"66.0807"	"21436"	"21436"	"21411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.3"	""	"128.9"	""	"132.5"	""	"144.0"	""	"174.2"	"181.5"	""	"1149"	"28"	"37.000"	"30.000"	"0.0863555059518718"	"21"	"0.0001889"	"0.001"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSDVYPDGFK"	"[K].fLSDVYPDGFk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"582.65485"	"1745.94999"	"1745.95144"	"-0.84"	"-0.00049"	"11/90"	"11"	"90"	"3492102.18103027"	"HCD"	"MS2"	"6.001905"	"100.5"	"100.000"	"66.1923"	"21429"	"21429"	"21401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.6"	""	"139.5"	""	"148.5"	""	"144.2"	""	"182.6"	"192.6"	""	"1185"	"38"	"37.000"	"30.000"	"0.00945558394737764"	"18"	"0.0001308"	"0.0002568"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSDVYPDGFK"	"[K].fLSDVYPDGFk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"873.47913"	"1745.95098"	"1745.95144"	"-0.27"	"-0.00023"	"8/90"	"8"	"90"	"1522685.78363037"	"HCD"	"MS2"	"22.56696"	"124.7"	"100.000"	"66.2223"	"21441"	"21441"	"21417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.5"	""	"180.0"	""	"180.9"	""	"188.8"	""	"211.9"	"234.6"	""	"1183"	"44"	"37.000"	"30.000"	"0.0021230232434252"	"20"	"0"	"6.11E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSDVYPDGFK"	"[K].fLSDVYPDGFk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"873.47980"	"1745.95232"	"1745.95144"	"0.50"	"0.00044"	"7/90"	"7"	"90"	"1553609.01867676"	"HCD"	"MS2"	"35.72206"	"119.8"	"100.000"	"66.0945"	"21442"	"21442"	"21411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.2"	""	"166.1"	""	"173.3"	""	"188.1"	""	"196.0"	"247.0"	""	"1197"	"32"	"37.000"	"30.000"	"0.0340458479110039"	"22"	"0.0001308"	"0.0002069"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGFLLPIDLSSLAR"	"[R].dGFLLPIDLSSLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXU7"	"MIF4G domain-containing protein OS=Rattus norvegicus OX=10116 GN=Mif4gd PE=2 SV=1"	"Q6AXU7"	"MIF4G domain-containing protein OS=Rattus norvegicus OX=10116 GN=Mif4gd PE=2 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"873.50153"	"1745.99578"	"1745.99990"	"-2.36"	"-0.00206"	"6/124"	"6"	"124"	"136374.736999512"	"HCD"	"MS2"	"5.864398"	"8.3"	"100.000"	"88.4875"	"30512"	"30512"	"30498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.6"	""	"10.2"	""	"13.0"	""	"15.1"	""	"15.8"	"11.7"	""	"1069"	"29"	"37.000"	"30.000"	"0.0642610340303008"	"18"	"0.0001889"	"0.000831"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGFLLPIDLSSLAR"	"[R].dGFLLPIDLSSLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXU7"	"MIF4G domain-containing protein OS=Rattus norvegicus OX=10116 GN=Mif4gd PE=2 SV=1"	"Q6AXU7"	"MIF4G domain-containing protein OS=Rattus norvegicus OX=10116 GN=Mif4gd PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"873.50287"	"1745.99846"	"1745.99990"	"-0.83"	"-0.00072"	"4/124"	"4"	"124"	"219514.133300781"	"HCD"	"MS2"	"20.91341"	"13.6"	"100.000"	"88.3844"	"30431"	"30431"	"30414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.6"	""	"16.8"	""	"19.5"	""	"24.0"	""	"22.6"	"31.2"	""	"1077"	"12"	"37.000"	"30.000"	"3.20026327414486"	"16"	"0.000523"	"0.002842"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HALIIYDDLSK"	"[K].hALIIYDDLSk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"582.67816"	"1746.01993"	"1746.02019"	"-0.15"	"-0.00009"	"13/86"	"13"	"86"	"17164796.9118652"	"HCD"	"MS2"	"13.86967"	"509.5"	"89.714"	"45.1546"	"12869"	"12869"	"12848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"656.3"	""	"704.8"	""	"671.5"	""	"833.2"	""	"918.0"	"1046.8"	""	"922"	"50"	"36.000"	"29.000"	"0.000423351326978931"	"18"	"0"	"4.342E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HALIIYDDLSK"	"[K].hALIIYDDLSk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"582.67816"	"1746.01993"	"1746.02019"	"-0.15"	"-0.00009"	"12/86"	"12"	"86"	"18166328.6107788"	"HCD"	"MS2"	"20.83875"	"586.3"	"100.000"	"45.4163"	"13025"	"13025"	"13003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"769.1"	""	"813.1"	""	"754.2"	""	"979.1"	""	"1086.8"	"1166.9"	""	"922"	"45"	"36.000"	"29.000"	"0.00147469064556773"	"18"	"0"	"3.601E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLAVNMVPFPR"	"[R].kLAVNmVPFPR.[L]"	"N-Term(TMT6plex); K1(TMT6plex); M6(Oxidation)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.68787"	"1746.04905"	"1746.05005"	"-0.58"	"-0.00034"	"8/102"	"8"	"102"	"30226327.9771729"	"HCD"	"MS2"	"46.00896"	"392.1"	"38.288"	"41.0229"	"11193"	"11193"	"11173"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"462.0"	""	"489.0"	""	"578.2"	""	"941.7"	"3.1"	"637.4"	"597.9"	""	"654"	"18"	"35.000"	"28.000"	"0.496075470159203"	"14"	"0.0001859"	"0.0003308"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIVISGVVLSDAK"	"[K].sIVISGVVLSDAk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"582.69830"	"1746.08036"	"1746.07771"	"1.52"	"0.00088"	"14/116"	"14"	"116"	"3875331.57855225"	"HCD"	"MS2"	"42.57163"	"119.8"	"100.000"	"59.7883"	"18867"	"18867"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.1"	""	"136.1"	""	"165.5"	""	"228.9"	"4.8"	"242.7"	"194.6"	""	"421"	"28"	"33.000"	"26.000"	"0.0354202889855333"	"16"	"0.0005564"	"0.003391"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSYTLNPDYIR"	"[R].yLSYTLNPDYIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"873.97443"	"1746.94158"	"1746.92640"	"8.69"	"0.00759"	"10/110"	"10"	"110"	"1330179.10198975"	"HCD"	"MS2"	"0"	"86.1"	"100.000"	"58.2548"	"18191"	"18191"	"18171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.2"	""	"140.4"	""	"125.6"	""	"139.1"	"0.9"	"138.8"	"134.8"	""	"1082"	"18"	"37.000"	"30.000"	"0.910326667039122"	"14"	"0.0002277"	"0.001347"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSYTLNPDYIR"	"[R].yLSYTLNPDYIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"873.97516"	"1746.94304"	"1746.92640"	"9.52"	"0.00832"	"7/110"	"7"	"110"	"1477847.63220215"	"HCD"	"MS2"	"0"	"95.3"	"100.000"	"58.3958"	"18303"	"18303"	"18277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.0"	""	"145.2"	""	"135.2"	""	"141.9"	"3.7"	"169.0"	"151.5"	""	"1064"	"11"	"37.000"	"30.000"	"4.74145499087153"	"14"	"0.001966"	"0.0299"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLAGFGYGLPISR"	"[R].aVPLAGFGYGLPISR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63065"	"[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdk1 PE=1 SV=1"	"Q63065"	"[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdk1 PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"874.00769"	"1747.00810"	"1747.01041"	"-1.32"	"-0.00115"	"13/112"	"13"	"112"	"400666.844848633"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"70.1194"	"23024"	"23024"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.5"	""	"23.3"	""	"19.6"	""	"29.9"	""	"29.8"	"31.5"	""	"1043"	"43"	"37.000"	"30.000"	"0.002919135891797"	"19"	"0"	"0.0001317"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLAGFGYGLPISR"	"[R].aVPLAGFGYGLPISR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63065"	"[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdk1 PE=1 SV=1"	"Q63065"	"[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdk1 PE=1 SV=1"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"583.00861"	"1747.01126"	"1747.01041"	"0.49"	"0.00029"	"12/112"	"12"	"112"	"1120597.6786499"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"69.9611"	"23011"	"23011"	"22986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.0"	""	"30.2"	""	"31.7"	""	"36.6"	""	"47.9"	"51.8"	""	"963"	"47"	"36.000"	"29.000"	"0.00106806157613381"	"17"	"0"	"2.034E-06"	"1.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLAGFGYGLPISR"	"[R].aVPLAGFGYGLPISR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63065"	"[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdk1 PE=1 SV=1"	"Q63065"	"[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdk1 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"583.00879"	"1747.01181"	"1747.01041"	"0.81"	"0.00047"	"17/112"	"17"	"112"	"995976.335998535"	"HCD"	"MS2"	"7.776547"	"24.6"	"100.000"	"70.1563"	"23039"	"23039"	"23011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.8"	""	"28.7"	""	"31.4"	""	"39.3"	""	"43.1"	"64.8"	""	"963"	"36"	"36.000"	"29.000"	"0.0117651181112215"	"17"	"0"	"7.949E-06"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLNNQLLEMK"	"[R].sVLNNQLLEMk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"874.01190"	"1747.01653"	"1747.01881"	"-1.31"	"-0.00114"	"14/110"	"14"	"110"	"680321.610656738"	"HCD"	"MS2"	"0"	"60.2"	"100.000"	"56.3711"	"17476"	"17476"	"17445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.9"	""	"79.4"	""	"85.7"	""	"65.5"	""	"108.8"	"136.9"	""	"918"	"46"	"36.000"	"29.000"	"0.00119898206166924"	"22"	"0"	"3.386E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLNNQLLEMK"	"[R].sVLNNQLLEMk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.01135"	"1747.01950"	"1747.01881"	"0.40"	"0.00023"	"12/110"	"12"	"110"	"2619040.38018799"	"HCD"	"MS2"	"19.61717"	"117.0"	"100.000"	"56.2024"	"17353"	"17353"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.0"	""	"142.4"	""	"157.0"	""	"171.7"	"5.2"	"244.8"	"238.5"	""	"899"	"12"	"36.000"	"29.000"	"3.01113131932728"	"13"	"0.0001889"	"0.0004814"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLNNQLLEMK"	"[R].sVLNNQLLEMk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"874.01361"	"1747.01995"	"1747.01881"	"0.65"	"0.00057"	"9/110"	"9"	"110"	"748641.483215332"	"HCD"	"MS2"	"0"	"68.8"	"100.000"	"56.1655"	"17338"	"17338"	"17307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.2"	""	"100.1"	""	"106.0"	""	"70.2"	""	"138.7"	"138.2"	""	"887"	"49"	"36.000"	"29.000"	"0.000563499615659988"	"24"	"0"	"1.716E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPPETGLFLVR"	"[R].lLYPPETGLFLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"874.02032"	"1747.03337"	"1747.03556"	"-1.25"	"-0.00109"	"5/98"	"5"	"98"	"873559.935180664"	"HCD"	"MS2"	"14.80241"	"29.9"	"100.000"	"79.5471"	"26912"	"26912"	"26895"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.0"	""	"36.8"	""	"44.5"	""	"47.3"	"1.3"	"54.3"	"52.6"	""	"843"	"24"	"36.000"	"29.000"	"0.151983898033622"	"22"	"0.0003839"	"0.002026"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPPETGLFLVR"	"[R].lLYPPETGLFLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"583.01605"	"1747.03360"	"1747.03556"	"-1.12"	"-0.00065"	"9/98"	"9"	"98"	"476783.46081543"	"HCD"	"MS2"	"3.94722"	"14.0"	"100.000"	"79.6492"	"26902"	"26902"	"26881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.1"	""	"18.1"	""	"23.5"	""	"24.2"	""	"22.7"	"25.0"	""	"805"	"33"	"36.000"	"29.000"	"0.0213189536166392"	"15"	"0"	"0.0001256"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPPETGLFLVR"	"[R].lLYPPETGLFLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"874.02087"	"1747.03447"	"1747.03556"	"-0.62"	"-0.00054"	"10/98"	"10"	"98"	"1060123.54644775"	"HCD"	"MS2"	"15.49198"	"37.3"	"100.000"	"79.2425"	"26787"	"26787"	"26767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.7"	""	"55.8"	""	"47.4"	""	"60.5"	""	"65.5"	"65.2"	""	"802"	"22"	"36.000"	"29.000"	"0.275514444445707"	"16"	"0.0001889"	"0.0006902"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPPETGLFLVR"	"[R].lLYPPETGLFLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"874.02100"	"1747.03472"	"1747.03556"	"-0.48"	"-0.00042"	"9/98"	"9"	"98"	"800663.620300293"	"HCD"	"MS2"	"14.28311"	"29.0"	"100.000"	"79.2568"	"26742"	"26742"	"26721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.7"	""	"43.6"	""	"46.1"	""	"46.5"	""	"52.2"	"45.5"	""	"803"	"17"	"36.000"	"29.000"	"0.810374095018147"	"25"	"0.000523"	"0.002865"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPPETGLFLVR"	"[R].lLYPPETGLFLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"583.01648"	"1747.03489"	"1747.03556"	"-0.39"	"-0.00022"	"10/98"	"10"	"98"	"1959968.51391602"	"HCD"	"MS2"	"19.79407"	"18.3"	"100.000"	"79.3400"	"26776"	"26776"	"26753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.2"	""	"23.6"	""	"42.1"	""	"23.5"	""	"24.8"	"32.8"	""	"803"	"42"	"36.000"	"29.000"	"0.00261027070672751"	"21"	"0"	"6.958E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPPETGLFLVR"	"[R].lLYPPETGLFLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"583.01660"	"1747.03525"	"1747.03556"	"-0.18"	"-0.00010"	"10/98"	"10"	"98"	"1940511.67260742"	"HCD"	"MS2"	"6.967838"	"17.9"	"100.000"	"79.3211"	"26819"	"26819"	"26799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.4"	""	"18.2"	""	"33.1"	""	"34.5"	"1.4"	"30.1"	"31.2"	""	"746"	"41"	"35.000"	"28.000"	"0.00329388802856124"	"17"	"0.0001859"	"0.0003146"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPPETGLFLVR"	"[R].lLYPPETGLFLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"874.02130"	"1747.03533"	"1747.03556"	"-0.13"	"-0.00012"	"14/98"	"14"	"98"	"1041741.31713867"	"HCD"	"MS2"	"3.15328"	"41.0"	"100.000"	"79.5661"	"26868"	"26868"	"26849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.6"	""	"55.4"	""	"52.2"	""	"67.8"	"1.4"	"70.0"	"83.8"	""	"746"	"11"	"35.000"	"28.000"	"2.79067223690661"	"17"	"0.0007076"	"0.006795"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYPPETGLFLVR"	"[R].lLYPPETGLFLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"583.01666"	"1747.03543"	"1747.03556"	"-0.07"	"-0.00004"	"9/98"	"9"	"98"	"432038.85333252"	"HCD"	"MS2"	"3.232759"	"14.8"	"100.000"	"79.6462"	"26952"	"26952"	"26927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.8"	""	"11.1"	""	"28.3"	""	"25.0"	""	"24.6"	"31.9"	""	"746"	"29"	"35.000"	"28.000"	"0.0512517656679668"	"22"	"0.0001889"	"0.0005071"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDILTLLNSTNK"	"[K].gDILTLLNSTNk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"583.01709"	"1747.03672"	"1747.03657"	"0.08"	"0.00005"	"10/112"	"10"	"112"	"1321243.28070068"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"67.8269"	"22089"	"22089"	"22058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.2"	""	"57.3"	""	"55.7"	""	"81.2"	""	"98.0"	"103.4"	""	"732"	"35"	"35.000"	"28.000"	"0.0116541629295176"	"18"	"0"	"0.0001061"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLALPWVPPLLR"	"[R].dQLALPWVPPLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"874.02612"	"1747.04497"	"1747.04679"	"-1.04"	"-0.00091"	"7/118"	"7"	"118"	"148221.911865234"	"HCD"	"MS2"	"43.06567"	"7.0"	"100.000"	"88.6264"	"30567"	"30567"	"30551"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"8.1"	""	"7.9"	""	"15.0"	""	"14.0"	"13.9"	""	"706"	"49"	"35.000"	"28.000"	"0.000422449407551457"	"21"	"0.0001889"	"0.0005231"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLALPWVPPLLR"	"[R].dQLALPWVPPLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"874.02637"	"1747.04546"	"1747.04679"	"-0.76"	"-0.00067"	"3/118"	"3"	"118"	"55910.5308837891"	"HCD"	"MS2"	"9.924457"	"1.4"	"100.000"	"89.1555"	"30757"	"30757"	"30752"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.0"	""	""	""	"6.8"	""	"1.9"	"3.2"	""	"690"	"3"	"35.000"	"28.000"	"15.8058950916514"	"13"	"0.002424"	"0.03572"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLALPWVPPLLR"	"[R].dQLALPWVPPLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"3"	"874.02661"	"1747.04595"	"1747.04679"	"-0.48"	"-0.00042"	"5/118"	"5"	"118"	"137459.761657715"	"HCD"	"MS2"	"25.74842"	"7.0"	"100.000"	"88.5463"	"30495"	"30495"	"30479"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"11.0"	""	"10.3"	""	"11.3"	""	"14.1"	"11.9"	""	"690"	"22"	"35.000"	"28.000"	"0.222238396602736"	"15"	"0.0003839"	"0.001716"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLALPWVPPLLR"	"[R].dQLALPWVPPLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"874.02679"	"1747.04631"	"1747.04679"	"-0.27"	"-0.00024"	"12/118"	"12"	"118"	"150861.874633789"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"88.8329"	"30602"	"30602"	"30592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.5"	""	"6.8"	""	"7.6"	""	"10.4"	""	"8.0"	"9.8"	""	"675"	"31"	"35.000"	"28.000"	"0.0285281610241598"	"25"	"0.0001889"	"0.0004652"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLALPWVPPLLR"	"[R].dQLALPWVPPLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"874.02686"	"1747.04643"	"1747.04679"	"-0.20"	"-0.00018"	"5/118"	"5"	"118"	"162402.34375"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"88.8933"	"30669"	"30669"	"30664"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.8"	""	"6.8"	""	"9.9"	""	"11.8"	""	"7.8"	"15.5"	""	"649"	"32"	"35.000"	"28.000"	"0.0187160717370785"	"23"	"0.0001889"	"0.0004589"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVSDSEYLYK"	"[R].wVSDSEYLYk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"874.46851"	"1747.92974"	"1747.93071"	"-0.56"	"-0.00049"	"16/78"	"16"	"78"	"2861900.47198486"	"HCD"	"MS2"	"6.694948"	"272.0"	"100.000"	"55.4837"	"17059"	"17059"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.7"	""	"272.8"	""	"218.7"	""	"537.3"	"4.3"	"661.2"	"690.8"	""	"1070"	"51"	"37.000"	"30.000"	"0.000443970160620216"	"29"	"0"	"3.619E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVSDSEYLYK"	"[R].wVSDSEYLYk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"874.46875"	"1747.93022"	"1747.93071"	"-0.28"	"-0.00024"	"9/78"	"9"	"78"	"2746418.9072876"	"HCD"	"MS2"	"0"	"239.5"	"100.000"	"55.6552"	"17183"	"17183"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.6"	""	"240.9"	""	"215.6"	""	"469.7"	"6.1"	"567.4"	"604.0"	""	"1058"	"60"	"37.000"	"30.000"	"4.93691525121608E-05"	""	"0"	"2.765E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQLVYFLDK"	"[K].tYQLVYFLDk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"874.50488"	"1748.00249"	"1748.00348"	"-0.57"	"-0.00050"	"14/102"	"14"	"102"	"1075505.19696045"	"HCD"	"MS2"	"0"	"94.2"	"100.000"	"72.5558"	"24070"	"24070"	"24047"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.2"	""	"141.1"	""	"158.9"	""	"148.0"	"1.1"	"149.2"	"148.1"	""	"1011"	"33"	"37.000"	"30.000"	"0.0248153931395141"	"20"	"0"	"0.000153"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQLVYFLDK"	"[K].tYQLVYFLDk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"874.50525"	"1748.00322"	"1748.00348"	"-0.15"	"-0.00013"	"11/102"	"11"	"102"	"770023.974121094"	"HCD"	"MS2"	"0"	"70.4"	"100.000"	"72.5480"	"24016"	"24016"	"23985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.6"	""	"107.4"	""	"105.0"	""	"115.4"	""	"113.2"	"119.6"	""	"1010"	"32"	"37.000"	"30.000"	"0.0332882817098382"	"15"	"0"	"0.0001333"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQLVYFLDK"	"[K].tYQLVYFLDk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"874.50562"	"1748.00395"	"1748.00348"	"0.27"	"0.00024"	"5/102"	"5"	"102"	"165301.650634766"	"HCD"	"MS2"	"18.66435"	"17.7"	"100.000"	"72.8984"	"24159"	"24159"	"24129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.7"	""	"25.1"	""	"27.9"	""	"28.4"	""	"30.0"	"34.6"	""	"992"	"16"	"36.000"	"29.000"	"1.13888972946373"	"22"	"0.0007076"	"0.007172"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVGALLVYDIAK"	"[R].gAVGALLVYDIAk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"0.7347"	"0.0000"	"1"	"1"	"1"	"583.36145"	"1748.06980"	"1748.07223"	"-1.39"	"-0.00081"	"16/96"	"16"	"96"	"10539747.6623535"	"HCD"	"MS2"	"10.49017"	"220.2"	"100.000"	"70.8463"	"23320"	"23320"	"23299"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.4"	""	"290.1"	""	"290.0"	""	"403.7"	"3.0"	"411.7"	"403.0"	""	"490"	"49"	"33.000"	"26.000"	"0.000287849900960185"	""	"0"	"1.158E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVGALLVYDIAK"	"[R].gAVGALLVYDIAk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"0.7609"	"0.0000"	"1"	"1"	"1"	"583.36151"	"1748.06998"	"1748.07223"	"-1.29"	"-0.00075"	"15/96"	"15"	"96"	"6544258.13250732"	"HCD"	"MS2"	"9.349357"	"151.1"	"100.000"	"71.1484"	"23444"	"23444"	"23427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.5"	""	"191.2"	""	"204.9"	""	"248.3"	""	"287.4"	"321.9"	""	"488"	"46"	"33.000"	"26.000"	"0.00063297976435699"	""	"0"	"3.229E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVGALLVYDIAK"	"[R].gAVGALLVYDIAk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"583.36163"	"1748.07035"	"1748.07223"	"-1.08"	"-0.00063"	"16/96"	"16"	"96"	"5932638.85174561"	"HCD"	"MS2"	"13.93311"	"134.6"	"100.000"	"70.7133"	"23318"	"23318"	"23290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.8"	""	"175.1"	""	"184.4"	""	"235.6"	"0.7"	"251.0"	"259.5"	""	"488"	"52"	"33.000"	"26.000"	"0.000153599508617156"	""	"0"	"1.024E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVGALLVYDIAK"	"[R].gAVGALLVYDIAk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"874.53906"	"1748.07085"	"1748.07223"	"-0.79"	"-0.00069"	"11/96"	"11"	"96"	"1240306.60321045"	"HCD"	"MS2"	"30.74441"	"86.3"	"100.000"	"70.7110"	"23317"	"23317"	"23290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.0"	""	"117.7"	""	"123.1"	""	"156.0"	"1.7"	"146.8"	"158.1"	""	"477"	"82"	"33.000"	"26.000"	"1.66145423615419E-07"	""	"0"	"1.081E-06"	"1.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVGALLVYDIAK"	"[R].gAVGALLVYDIAk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"583.36182"	"1748.07090"	"1748.07223"	"-0.76"	"-0.00044"	"14/96"	"14"	"96"	"12502315.7926636"	"HCD"	"MS2"	"6.337886"	"193.5"	"71.268"	"70.9992"	"23435"	"23435"	"23418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"230.8"	""	"237.3"	""	"258.8"	""	"334.5"	"1.5"	"372.2"	"401.2"	""	"477"	"55"	"33.000"	"26.000"	"7.50737972913163E-05"	""	"0"	"1.215E-05"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVGALLVYDIAK"	"[R].gAVGALLVYDIAk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.8131"	"0.0000"	"1"	"1"	"1"	"874.53943"	"1748.07158"	"1748.07223"	"-0.37"	"-0.00032"	"12/96"	"12"	"96"	"2858329.80804443"	"HCD"	"MS2"	"0"	"182.7"	"100.000"	"71.0108"	"23439"	"23439"	"23418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"230.7"	""	"229.1"	""	"244.7"	""	"299.3"	"2.2"	"346.0"	"381.2"	""	"479"	"107"	"33.000"	"26.000"	"4.84513093293447E-10"	""	"0"	"5.023E-07"	"1.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVGALLVYDIAK"	"[R].gAVGALLVYDIAk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"874.53961"	"1748.07195"	"1748.07223"	"-0.16"	"-0.00014"	"22/96"	"22"	"96"	"1800443.49255371"	"HCD"	"MS2"	"38.73709"	"126.8"	"100.000"	"70.8185"	"23309"	"23309"	"23283"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.7"	""	"162.9"	""	"156.7"	""	"229.6"	"1.1"	"232.2"	"251.3"	""	"477"	"94"	"33.000"	"26.000"	"8.69938163417576E-09"	""	"0"	"2.764E-07"	"1.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVGALLVYDIAK"	"[R].gAVGALLVYDIAk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.7582"	"0.0000"	"1"	"1"	"1"	"874.53973"	"1748.07219"	"1748.07223"	"-0.02"	"-0.00002"	"11/96"	"11"	"96"	"2139400.37786865"	"HCD"	"MS2"	"0"	"144.7"	"100.000"	"71.1187"	"23431"	"23431"	"23411"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.7"	""	"182.1"	""	"181.8"	""	"259.9"	"4.8"	"280.3"	"292.0"	""	"484"	"91"	"33.000"	"26.000"	"2.06926144518093E-08"	""	"0"	"2.083E-07"	"1.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCPFAGILENGVVR"	"[R].vcPFAGILENGVVR.[Y]"	"N-Term(TMT6plex); C2(Methylthio)"	"1"	"1"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"874.97290"	"1748.93852"	"1748.93890"	"-0.21"	"-0.00019"	"5/112"	"5"	"112"	"182171.119812012"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"81.8898"	"27867"	"27867"	"27838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.0"	""	"23.3"	""	"16.9"	""	"13.1"	""	"19.0"	"14.1"	""	"1138"	"24"	"37.000"	"30.000"	"0.251832783874335"	"14"	"0.0006037"	"0.004852"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCPFAGILENGVVR"	"[R].vcPFAGILENGVVR.[Y]"	"N-Term(TMT6plex); C2(Methylthio)"	"1"	"1"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"874.97290"	"1748.93852"	"1748.93890"	"-0.21"	"-0.00019"	"13/112"	"13"	"112"	"176490.002624512"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"81.8624"	"27805"	"27805"	"27776"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.2"	""	"20.3"	""	"18.3"	""	"15.0"	""	"16.3"	"17.0"	""	"1138"	"39"	"37.000"	"30.000"	"0.00663914672107688"	"18"	"0.0001889"	"0.0006961"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFATSLYSMIK"	"[K].nFATSLYSmIk.[G]"	"N-Term(TMT6plex); M9(Oxidation); K11(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"874.98694"	"1748.96660"	"1748.96571"	"0.51"	"0.00044"	"10/108"	"10"	"108"	"1918537.23803711"	"HCD"	"MS2"	"17.66669"	"147.1"	"100.000"	"58.2651"	"18249"	"18249"	"18229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.9"	""	"191.2"	""	"183.2"	""	"331.8"	"2.2"	"245.2"	"262.3"	""	"1128"	"43"	"37.000"	"30.000"	"0.00302189314837525"	"17"	"0.0003839"	"0.002049"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFATSLYSMIK"	"[K].nFATSLYSmIk.[G]"	"N-Term(TMT6plex); M9(Oxidation); K11(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"874.98779"	"1748.96831"	"1748.96571"	"1.48"	"0.00130"	"9/108"	"9"	"108"	"2050111.32824707"	"HCD"	"MS2"	"11.26549"	"169.8"	"100.000"	"58.0729"	"18117"	"18117"	"18091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.8"	""	"198.4"	""	"195.9"	""	"412.8"	""	"301.3"	"322.9"	""	"1128"	"53"	"37.000"	"30.000"	"0.00027496606841831"	"17"	"0.0003839"	"0.001933"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAPTLTLYVGK"	"[K].dIAPTLTLYVGk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.69000"	"1749.05545"	"1749.05624"	"-0.45"	"-0.00026"	"11/100"	"11"	"100"	"3188096.16040039"	"HCD"	"MS2"	"18.4102"	"100.1"	"100.000"	"64.3060"	"20711"	"20711"	"20691"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.5"	""	"132.8"	""	"98.1"	""	"230.5"	""	"194.4"	"162.6"	""	"571"	"34"	"34.000"	"27.000"	"0.0109800953773949"	"15"	"0"	"0.0001746"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAPTLTLYVGK"	"[K].dIAPTLTLYVGk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"875.03149"	"1749.05571"	"1749.05624"	"-0.30"	"-0.00027"	"19/100"	"19"	"100"	"740160.829467773"	"HCD"	"MS2"	"0"	"51.3"	"100.000"	"64.3241"	"20719"	"20719"	"20691"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.0"	""	"57.7"	""	"52.6"	""	"120.9"	"0.5"	"86.7"	"83.3"	""	"564"	"86"	"34.000"	"27.000"	"6.73362781781516E-08"	"20"	"0"	"1.842E-06"	"1.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAPTLTLYVGK"	"[K].dIAPTLTLYVGk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.69012"	"1749.05582"	"1749.05624"	"-0.24"	"-0.00014"	"12/100"	"12"	"100"	"4651427.85333252"	"HCD"	"MS2"	"16.08159"	"119.3"	"100.000"	"64.3395"	"20672"	"20672"	"20649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.5"	""	"136.7"	""	"116.9"	""	"274.7"	""	"210.4"	"197.9"	""	"564"	"41"	"34.000"	"27.000"	"0.00236183257559781"	"15"	"0"	"0.000119"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAPTLTLYVGK"	"[K].dIAPTLTLYVGk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.03192"	"1749.05657"	"1749.05624"	"0.18"	"0.00016"	"10/100"	"10"	"100"	"1000150.79931641"	"HCD"	"MS2"	"0"	"72.0"	"100.000"	"64.3510"	"20677"	"20677"	"20649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.2"	""	"83.5"	""	"71.1"	""	"170.4"	"1.4"	"124.9"	"105.7"	""	"576"	"76"	"34.000"	"27.000"	"6.90863880677613E-07"	"17"	"0"	"1.767E-06"	"1.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAPTLTLYVGK"	"[K].dIAPTLTLYVGk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"583.69043"	"1749.05674"	"1749.05624"	"0.28"	"0.00016"	"8/100"	"8"	"100"	"1341184.99908447"	"HCD"	"MS2"	"8.212783"	"55.9"	"100.000"	"64.6330"	"20845"	"20845"	"20819"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.7"	""	"67.7"	""	"65.8"	""	"114.9"	""	"102.6"	"107.1"	""	"576"	"23"	"34.000"	"27.000"	"0.138800965716037"	"15"	"0.0001859"	"0.0003305"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCPFAGILENGVVR"	"[R].vcPFAGILEnGVVR.[Y]"	"N-Term(TMT6plex); C2(Methylthio); N10(Deamidated)"	"1"	"1"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.46411"	"1749.92095"	"1749.92291"	"-1.12"	"-0.00098"	"11/112"	"11"	"112"	"482411.622680664"	"HCD"	"MS2"	"37.14932"	"20.4"	"100.000"	"82.2088"	"27946"	"27946"	"27920"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.4"	""	"31.9"	""	"33.3"	""	"26.0"	""	"37.8"	"34.7"	""	"1095"	"6"	"37.000"	"30.000"	"13.879829251976"	"13"	"0.001966"	"0.02886"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCPFAGILENGVVR"	"[R].vcPFAGILEnGVVR.[Y]"	"N-Term(TMT6plex); C2(Methylthio); N10(Deamidated)"	"1"	"1"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.46515"	"1749.92302"	"1749.92291"	"0.06"	"0.00005"	"4/112"	"4"	"112"	"245539.107299805"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"82.1969"	"27992"	"27992"	"27966"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.1"	""	"18.7"	""	"21.5"	""	"18.0"	""	"18.9"	"22.7"	""	"1102"	"1"	"37.000"	"30.000"	"42.8698139622932"	"13"	"0.003197"	"0.0647"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCPFAGILENGVVR"	"[R].vcPFAGILEnGVVR.[Y]"	"N-Term(TMT6plex); C2(Methylthio); N10(Deamidated)"	"1"	"1"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"P26644"	"Beta-2-glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Apoh PE=2 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"583.97943"	"1749.92374"	"1749.92291"	"0.47"	"0.00028"	"11/112"	"11"	"112"	"301423.789306641"	"HCD"	"MS2"	"12.31818"	"10.6"	"100.000"	"82.4072"	"28027"	"28027"	"28000"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"13.4"	""	"15.0"	""	"20.7"	""	"20.8"	"21.7"	""	"1150"	"19"	"37.000"	"30.000"	"0.804762710479256"	"16"	"0.0004166"	"0.002365"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWGVDYFFEK"	"[K].tWGVDYFFEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0T0"	"Thiopurine S-methyltransferase OS=Rattus norvegicus OX=10116 GN=Tpmt PE=2 SV=1"	"Q9Z0T0"	"Thiopurine S-methyltransferase OS=Rattus norvegicus OX=10116 GN=Tpmt PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"875.46576"	"1749.92424"	"1749.92523"	"-0.56"	"-0.00049"	"10/88"	"10"	"88"	"500311.20892334"	"HCD"	"MS2"	"29.17119"	"52.5"	"100.000"	"73.7612"	"24511"	"24511"	"24481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.2"	""	"80.1"	""	"76.1"	""	"70.9"	"2.8"	"95.1"	"94.5"	""	"1134"	"13"	"37.000"	"30.000"	"3.18114202410411"	"18"	"0.0002277"	"0.00122"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMENWIPFLK"	"[K].nMENWIPFLk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P80299"	"Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1"	"P80299"	"Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"875.49164"	"1749.97600"	"1749.97622"	"-0.13"	"-0.00011"	"8/90"	"8"	"90"	"148605.316162109"	"HCD"	"MS2"	"33.04633"	"16.5"	"100.000"	"78.3986"	"26392"	"26392"	"26369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.3"	""	"20.9"	""	"17.2"	""	"22.2"	""	"23.0"	"34.0"	""	"1052"	"17"	"37.000"	"30.000"	"1.16408781725257"	"25"	"0.0003839"	"0.00174"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMENWIPFLK"	"[K].nMENWIPFLk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P80299"	"Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1"	"P80299"	"Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"875.49164"	"1749.97600"	"1749.97622"	"-0.13"	"-0.00011"	"9/90"	"9"	"90"	"178730.878356934"	"HCD"	"MS2"	"100"	"15.0"	"100.000"	"78.2824"	"26396"	"26396"	"26367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.0"	""	"25.1"	""	"17.3"	""	"18.2"	""	"19.3"	"34.7"	""	"1052"	"24"	"37.000"	"30.000"	"0.196329583000549"	"20"	"0.0001859"	"0.0003615"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILIANTGMDTDK"	"[K].iLIANTGMDTDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"875.49286"	"1749.97844"	"1749.98209"	"-2.09"	"-0.00183"	"11/112"	"11"	"112"	"651001.88293457"	"HCD"	"MS2"	"0"	"55.7"	"100.000"	"48.7439"	"14334"	"14334"	"14303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.4"	""	"70.3"	""	"74.1"	""	"76.4"	""	"117.7"	"116.2"	""	"1063"	"78"	"37.000"	"30.000"	"7.54229072777752E-07"	"21"	"0"	"3.755E-06"	"1.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAQFLYPAVQLQR"	"[R].sAQFLYPAVQLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"875.49451"	"1749.98174"	"1749.98492"	"-1.82"	"-0.00159"	"7/116"	"7"	"116"	"377324.783203125"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"54.5293"	"16722"	"16722"	"16696"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.8"	""	"32.0"	""	"32.8"	""	"49.0"	""	"54.7"	"57.4"	""	"1031"	"35"	"37.000"	"30.000"	"0.0149702367837643"	"23"	"0.0001308"	"0.0002675"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILIANTGMDTDK"	"[K].iLIANTGMDTDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.9828"	"0.0000"	"1"	"1"	"1"	"875.49591"	"1749.98454"	"1749.98209"	"1.40"	"0.00123"	"14/112"	"14"	"112"	"257705.975952148"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"49.1294"	"14539"	"14539"	"14511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.8"	""	"29.9"	""	"28.6"	""	"39.2"	""	"59.2"	"50.8"	""	"1040"	"58"	"37.000"	"30.000"	"7.96165480074655E-05"	"17"	"0.0001308"	"0.0002122"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAQFLYPAVQLQR"	"[R].sAQFLYPAVQLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"875.49622"	"1749.98516"	"1749.98492"	"0.13"	"0.00012"	"9/116"	"9"	"116"	"368093.767883301"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"54.2839"	"16569"	"16569"	"16541"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.8"	""	"33.5"	""	"32.8"	""	"47.7"	"1.9"	"52.9"	"52.2"	""	"1064"	"29"	"37.000"	"30.000"	"0.0737754100959845"	"29"	"0"	"0.0001278"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFTDVVTTNLK"	"[RK].gPFTDVVTTNLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z269; Q9Z270"	"Vesicle-associated membrane protein-associated protein B OS=Rattus norvegicus OX=10116 GN=Vapb PE=1 SV=3; Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"875.50952"	"1750.01177"	"1750.01511"	"-1.91"	"-0.00167"	"10/102"	"10"	"102"	"1193629.2598877"	"HCD"	"MS2"	"0"	"114.2"	"100.000"	"55.3104"	"17042"	"17042"	"17013"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.2"	""	"126.8"	""	"129.2"	""	"213.3"	""	"258.0"	"248.3"	""	"847"	"50"	"36.000"	"29.000"	"0.000474081943648339"	"20"	"0"	"3.227E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDTVNNVFK"	"[K].eLLDTVNNVFk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6NX65"	"Programmed cell death protein 10 OS=Rattus norvegicus OX=10116 GN=Pdcd10 PE=2 SV=1"	"Q6NX65"	"Programmed cell death protein 10 OS=Rattus norvegicus OX=10116 GN=Pdcd10 PE=2 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"875.51031"	"1750.01335"	"1750.01511"	"-1.00"	"-0.00088"	"8/96"	"8"	"96"	"246945.530395508"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"67.5384"	"22022"	"22022"	"21994"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.6"	""	"28.5"	""	"30.2"	""	"35.2"	""	"42.0"	"49.4"	""	"841"	"50"	"36.000"	"29.000"	"0.00039515365209243"	"18"	"0"	"7.826E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFTDVVTTNLK"	"[RK].gPFTDVVTTNLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z269; Q9Z270"	"Vesicle-associated membrane protein-associated protein B OS=Rattus norvegicus OX=10116 GN=Vapb PE=1 SV=3; Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"584.00934"	"1750.01346"	"1750.01511"	"-0.94"	"-0.00055"	"7/102"	"7"	"102"	"9429579.21148682"	"HCD"	"MS2"	"17.41578"	"282.2"	"100.000"	"55.3450"	"17056"	"17056"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"323.6"	""	"348.1"	""	"357.0"	""	"535.3"	"0.9"	"549.0"	"563.7"	""	"841"	"23"	"36.000"	"29.000"	"0.202659048901366"	"23"	"0"	"0.0001446"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFTDVVTTNLK"	"[RK].gPFTDVVTTNLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z269; Q9Z270"	"Vesicle-associated membrane protein-associated protein B OS=Rattus norvegicus OX=10116 GN=Vapb PE=1 SV=3; Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"584.00958"	"1750.01419"	"1750.01511"	"-0.52"	"-0.00030"	"9/102"	"9"	"102"	"8453308.2243042"	"HCD"	"MS2"	"6.850972"	"271.0"	"100.000"	"55.1987"	"16942"	"16942"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"294.4"	""	"339.5"	""	"337.5"	""	"497.6"	""	"577.8"	"531.1"	""	"826"	"27"	"36.000"	"29.000"	"0.0866862171936515"	"20"	"0"	"0.0001551"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFTDVVTTNLK"	"[RK].gPFTDVVTTNLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z269; Q9Z270"	"Vesicle-associated membrane protein-associated protein B OS=Rattus norvegicus OX=10116 GN=Vapb PE=1 SV=3; Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"2"	"2"	"0.8795"	"0.0000"	"1"	"1"	"1"	"875.51123"	"1750.01518"	"1750.01511"	"0.04"	"0.00004"	"20/102"	"20"	"102"	"1752322.637146"	"HCD"	"MS2"	"10.20783"	"161.1"	"100.000"	"55.2149"	"16949"	"16949"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.1"	""	"169.5"	""	"163.2"	""	"300.8"	"1.5"	"351.5"	"365.1"	""	"840"	"83"	"36.000"	"29.000"	"2.17394869419238E-07"	"28"	"0"	"1.625E-06"	"1.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPFTDVVTTNLK"	"[RK].gPFTDVVTTNLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z269; Q9Z270"	"Vesicle-associated membrane protein-associated protein B OS=Rattus norvegicus OX=10116 GN=Vapb PE=1 SV=3; Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"584.01001"	"1750.01548"	"1750.01511"	"0.21"	"0.00012"	"12/102"	"12"	"102"	"6669881.84472656"	"HCD"	"MS2"	"1.597714"	"246.2"	"100.000"	"55.6575"	"17184"	"17184"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.8"	""	"253.0"	""	"291.6"	""	"449.8"	""	"578.2"	"564.8"	""	"832"	"27"	"36.000"	"29.000"	"0.0910108835563013"	"23"	"0.0001859"	"0.0003729"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVFNVTTVDLK"	"[K].gVVFNVTTVDLk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"584.02209"	"1750.05173"	"1750.05149"	"0.14"	"0.00008"	"12/108"	"12"	"108"	"7320477.60296631"	"HCD"	"MS2"	"10.63744"	"201.9"	"100.000"	"62.8858"	"20078"	"20078"	"20057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.7"	""	"265.2"	""	"261.1"	""	"362.2"	""	"432.8"	"462.1"	""	"580"	"41"	"34.000"	"27.000"	"0.00205777552709383"	"17"	"0"	"0.0001585"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVFNVTTVDLK"	"[K].gVVFNVTTVDLk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"875.52972"	"1750.05217"	"1750.05149"	"0.39"	"0.00034"	"18/108"	"18"	"108"	"2241752.79718018"	"HCD"	"MS2"	"100"	"177.1"	"100.000"	"62.9018"	"20085"	"20085"	"20057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.5"	""	"229.4"	""	"217.5"	""	"323.1"	""	"393.5"	"397.9"	""	"579"	"54"	"34.000"	"27.000"	"0.000120961891144197"	"22"	"0"	"6.872E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVFNVTTVDLK"	"[K].gVVFNVTTVDLk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.8554"	"0.0000"	"1"	"1"	"1"	"875.52979"	"1750.05229"	"1750.05149"	"0.46"	"0.00040"	"19/108"	"19"	"108"	"2437812.26318359"	"HCD"	"MS2"	"18.8771"	"183.5"	"100.000"	"62.9833"	"20171"	"20171"	"20147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.5"	""	"237.5"	""	"239.2"	""	"333.7"	"0.1"	"398.3"	"406.2"	""	"570"	"83"	"34.000"	"27.000"	"1.57704781126485E-07"	""	"0"	"5.725E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVFNVTTVDLK"	"[K].gVVFNVTTVDLk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"584.02234"	"1750.05246"	"1750.05149"	"0.55"	"0.00032"	"13/108"	"13"	"108"	"9921850.81958008"	"HCD"	"MS2"	"42.87682"	"269.9"	"100.000"	"62.9744"	"20167"	"20167"	"20147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.3"	""	"379.1"	""	"338.1"	""	"494.0"	""	"545.9"	"582.5"	""	"570"	"43"	"34.000"	"27.000"	"0.00158432713322065"	"22"	"0"	"5.163E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLALALISVSNPR"	"[R].aVPLALALISVSNPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.03052"	"1750.07700"	"1750.07882"	"-1.04"	"-0.00061"	"13/120"	"13"	"120"	"1030487.46447754"	"HCD"	"MS2"	"39.13448"	"11.8"	"100.000"	"80.8255"	"27433"	"27433"	"27406"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.0"	""	"11.2"	""	"15.0"	""	"28.3"	""	"18.2"	"22.5"	""	"380"	"47"	"32.000"	"25.000"	"0.000347339041067121"	"15"	"0"	"4.187E-06"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLALALISVSNPR"	"[R].aVPLALALISVSNPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"584.03076"	"1750.07773"	"1750.07882"	"-0.62"	"-0.00036"	"13/120"	"13"	"120"	"1446065.73321533"	"HCD"	"MS2"	"20.31616"	"11.5"	"100.000"	"80.8631"	"27397"	"27397"	"27376"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.4"	""	"18.4"	""	"14.9"	""	"17.4"	""	"20.7"	"22.0"	""	"364"	"84"	"32.000"	"25.000"	"7.69256877963397E-08"	""	"0"	"2.609E-06"	"1.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLALALISVSNPR"	"[R].aVPLALALISVSNPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"875.54279"	"1750.07829"	"1750.07882"	"-0.30"	"-0.00026"	"13/120"	"13"	"120"	"623184.493591309"	"HCD"	"MS2"	"41.46841"	"17.4"	"100.000"	"81.0571"	"27476"	"27476"	"27456"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.0"	""	"23.1"	""	"27.5"	""	"22.8"	""	"34.7"	"34.3"	""	"364"	"56"	"32.000"	"25.000"	"4.52972031927395E-05"	"17"	"0"	"9.086E-06"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLALALISVSNPR"	"[R].aVPLALALISVSNPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9865"	"0.0000"	"1"	"1"	"1"	"584.03101"	"1750.07846"	"1750.07882"	"-0.20"	"-0.00012"	"17/120"	"17"	"120"	"2567898.15197754"	"HCD"	"MS2"	"1.079559"	"12.1"	"100.000"	"81.1142"	"27551"	"27551"	"27534"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.2"	""	"18.3"	""	"18.1"	""	"19.2"	""	"18.4"	"25.4"	""	"362"	"74"	"32.000"	"25.000"	"7.04171712439649E-07"	"18"	"0"	"2.915E-06"	"1.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLALALISVSNPR"	"[R].aVPLALALISVSNPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9383"	"0.0000"	"1"	"1"	"1"	"584.03107"	"1750.07865"	"1750.07882"	"-0.10"	"-0.00006"	"10/120"	"10"	"120"	"2335824.70977783"	"HCD"	"MS2"	"4.785155"	"12.7"	"100.000"	"81.1654"	"27521"	"27521"	"27504"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.0"	""	"16.4"	"1.8"	"17.7"	""	"23.6"	"1.5"	"23.8"	"22.1"	""	"363"	"81"	"32.000"	"25.000"	"1.43178111347768E-07"	"23"	"0"	"1.445E-06"	"1.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPLALALISVSNPR"	"[R].aVPLALALISVSNPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.54321"	"1750.07915"	"1750.07882"	"0.19"	"0.00016"	"3/120"	"3"	"120"	"148884.092346191"	"HCD"	"MS2"	"39.39241"	"7.3"	"100.000"	"81.2873"	"27621"	"27621"	"27598"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.2"	""	"9.9"	""	"10.2"	""	"13.2"	""	"16.1"	"11.2"	""	"361"	"3"	"32.000"	"25.000"	"9.71576957441902"	"13"	"0.005916"	"0.1971"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLADQGQSWK"	"[R].mLLADQGQSWk.[E]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"875.98077"	"1750.95427"	"1750.95621"	"-1.11"	"-0.00097"	"9/98"	"9"	"98"	"645721.218811035"	"HCD"	"MS2"	"0"	"49.6"	"100.000"	"44.4629"	"12587"	"12587"	"12562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.7"	""	"44.8"	""	"45.8"	""	"96.5"	"1.2"	"124.8"	"111.8"	""	"1195"	"63"	"37.000"	"30.000"	"3.28350672129931E-05"	"24"	"0.0001889"	"0.0003831"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLADQGQSWK"	"[R].mLLADQGQSWk.[E]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"875.98108"	"1750.95488"	"1750.95621"	"-0.76"	"-0.00067"	"9/98"	"9"	"98"	"604780.159362793"	"HCD"	"MS2"	"0"	"50.2"	"100.000"	"44.7542"	"12755"	"12755"	"12734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.6"	""	"50.8"	""	"44.1"	""	"93.6"	""	"119.5"	"115.7"	""	"1182"	"58"	"37.000"	"30.000"	"0.000100829469190085"	"23"	"0.0001308"	"0.0002737"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYMYAQYVK"	"[K].iNYMYAQYVk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"875.98419"	"1750.96111"	"1750.96023"	"0.50"	"0.00044"	"6/90"	"6"	"90"	"678086.02130127"	"HCD"	"MS2"	"15.63268"	"72.5"	"100.000"	"55.1199"	"16964"	"16964"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.0"	""	"107.3"	""	"100.0"	""	"93.7"	"1.1"	"135.1"	"140.1"	""	"1166"	"21"	"37.000"	"30.000"	"0.468455729234215"	"20"	"0.0001889"	"0.0005053"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYLLSMGIANPVTR"	"[K].sYLLSMGIANPVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"875.98901"	"1750.97075"	"1750.97231"	"-0.89"	"-0.00078"	"14/136"	"14"	"136"	"399153.58380127"	"HCD"	"MS2"	"0"	"29.8"	"100.000"	"61.6001"	"19553"	"19553"	"19529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.6"	""	"39.2"	""	"43.6"	""	"36.8"	""	"71.9"	"58.5"	""	"1130"	"31"	"37.000"	"30.000"	"0.0492094428325186"	"18"	"0.0001889"	"0.0003965"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYLLSMGIANPVTR"	"[K].sYLLSMGIANPVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"875.98932"	"1750.97136"	"1750.97231"	"-0.54"	"-0.00047"	"9/136"	"9"	"136"	"454595.911621094"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"61.6967"	"19646"	"19646"	"19619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.6"	""	"42.0"	""	"40.3"	""	"44.2"	""	"72.1"	"64.8"	""	"1114"	"61"	"37.000"	"30.000"	"4.55884886991079E-05"	"23"	"0"	"4.459E-06"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMYESLPVVAVK"	"[R].gMYESLPVVAVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9531"	"0.0000"	"1"	"1"	"1"	"876.01270"	"1751.01811"	"1751.01775"	"0.21"	"0.00018"	"10/90"	"10"	"90"	"2838948.99816895"	"HCD"	"MS2"	"0"	"194.8"	"100.000"	"57.3089"	"17859"	"17859"	"17829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"441.4"	""	"325.4"	""	"308.0"	""	"257.9"	""	"236.2"	"265.9"	""	"837"	"64"	"36.000"	"29.000"	"1.65080380918504E-05"	"19"	"0"	"5.901E-06"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMYESLPVVAVK"	"[R].gMYESLPVVAVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"584.34424"	"1751.01816"	"1751.01775"	"0.24"	"0.00014"	"13/90"	"13"	"90"	"7449305.38458252"	"HCD"	"MS2"	"9.478827"	"194.1"	"100.000"	"57.2631"	"17840"	"17840"	"17813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.4"	""	"312.6"	""	"287.6"	""	"289.6"	""	"286.2"	"291.2"	""	"837"	"30"	"36.000"	"29.000"	"0.0402434738503563"	"17"	"7.476E-05"	"0.0001999"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMYESLPVVAVK"	"[R].gMYESLPVVAVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8539"	"0.0000"	"1"	"1"	"1"	"876.01282"	"1751.01836"	"1751.01775"	"0.35"	"0.00030"	"11/90"	"11"	"90"	"3757375.22418213"	"HCD"	"MS2"	"0"	"240.9"	"100.000"	"57.4281"	"17853"	"17853"	"17835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"530.7"	""	"398.3"	""	"352.9"	""	"336.0"	"0.9"	"314.5"	"336.7"	""	"838"	"89"	"36.000"	"29.000"	"5.89133912610434E-08"	""	"0"	"1.733E-06"	"1.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMYESLPVVAVK"	"[R].gMYESLPVVAVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"876.01288"	"1751.01848"	"1751.01775"	"0.42"	"0.00037"	"11/90"	"11"	"90"	"3175758.41485596"	"HCD"	"MS2"	"0"	"197.9"	"100.000"	"57.1262"	"17730"	"17730"	"17707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"459.5"	""	"352.4"	""	"279.9"	""	"251.9"	"2.4"	"251.2"	"266.0"	""	"838"	"93"	"36.000"	"29.000"	"1.87591874449896E-08"	""	"0"	"9.208E-07"	"1.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMYESLPVVAVK"	"[R].gMYESLPVVAVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8539"	"0.0000"	"1"	"1"	"1"	"876.01288"	"1751.01848"	"1751.01775"	"0.42"	"0.00037"	"11/90"	"11"	"90"	"4799027.92425537"	"HCD"	"MS2"	"6.002661"	"300.4"	"100.000"	"57.5905"	"17974"	"17974"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"657.4"	""	"488.5"	""	"447.7"	""	"410.2"	"3.4"	"386.7"	"436.4"	""	"838"	"89"	"36.000"	"29.000"	"5.69133334120017E-08"	""	"0"	"2.938E-06"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMYESLPVVAVK"	"[R].gMYESLPVVAVk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"584.34467"	"1751.01944"	"1751.01775"	"0.97"	"0.00056"	"13/90"	"13"	"90"	"7754015.66131592"	"HCD"	"MS2"	"24.80119"	"205.6"	"100.000"	"57.0660"	"17706"	"17706"	"17675"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"380.3"	""	"351.1"	""	"304.5"	""	"302.5"	""	"303.5"	"300.8"	""	"824"	"33"	"36.000"	"29.000"	"0.0209361690334951"	"17"	"0"	"0.0001265"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIFSQQADLSR"	"[R].kIFSQQADLSR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.34491"	"1751.02018"	"1751.02159"	"-0.81"	"-0.00047"	"10/112"	"10"	"112"	"12209334.4593506"	"HCD"	"MS2"	"11.29836"	"329.9"	"55.536"	"34.8758"	"8674"	"8674"	"8654"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"534.2"	""	"494.1"	""	"460.3"	""	"496.0"	"9.0"	"584.5"	"543.4"	""	"803"	"28"	"36.000"	"29.000"	"0.0624720201089438"	"14"	"0"	"1.538E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIFSQQADLSR"	"[R].kIFSQQADLSR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"1"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"584.34491"	"1751.02018"	"1751.02159"	"-0.81"	"-0.00047"	"10/112"	"10"	"112"	"13339784.494751"	"HCD"	"MS2"	"13.41153"	"467.6"	"75.828"	"34.9120"	"8732"	"8732"	"8714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"841.4"	""	"676.0"	""	"627.0"	""	"729.2"	"4.4"	"813.6"	"729.8"	""	"803"	"29"	"36.000"	"29.000"	"0.0480491323319859"	"15"	"0"	"1.784E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELGLAMASFLK"	"[K].gGELGLAMASFLk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"584.67505"	"1752.01059"	"1752.01300"	"-1.37"	"-0.00080"	"12/110"	"12"	"110"	"2027362.48144531"	"HCD"	"MS2"	"24.2162"	"47.9"	"100.000"	"77.7414"	"26175"	"26175"	"26149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.8"	""	"78.5"	""	"80.7"	""	"53.8"	"1.6"	"77.0"	"92.0"	""	"891"	"54"	"36.000"	"29.000"	"0.000165518944562791"	"23"	"0"	"9.307E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELGLAMASFLK"	"[K].gGELGLAMASFLk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.9733"	"0.0000"	"1"	"1"	"1"	"876.50903"	"1752.01079"	"1752.01300"	"-1.26"	"-0.00110"	"11/110"	"11"	"110"	"347200.052612305"	"HCD"	"MS2"	"39.24095"	"32.6"	"100.000"	"77.7506"	"26179"	"26179"	"26149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.2"	""	"54.7"	""	"44.2"	""	"47.4"	"0.5"	"48.9"	"63.0"	""	"891"	"75"	"36.000"	"29.000"	"1.44493299529135E-06"	"19"	"0"	"9.173E-07"	"1.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELGLAMASFLK"	"[K].gGELGLAMASFLk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.9306"	"0.0000"	"1"	"1"	"1"	"876.50928"	"1752.01128"	"1752.01300"	"-0.98"	"-0.00086"	"9/110"	"9"	"110"	"411597.76171875"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"77.8184"	"26155"	"26155"	"26137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.4"	""	"78.5"	""	"59.3"	""	"38.7"	"0.5"	"72.3"	"72.4"	""	"895"	"72"	"36.000"	"29.000"	"3.09594359486224E-06"	"22"	"0"	"2.754E-06"	"1.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELGLAMASFLK"	"[K].gGELGLAMASFLk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"584.67572"	"1752.01261"	"1752.01300"	"-0.22"	"-0.00013"	"13/110"	"13"	"110"	"1952483.30279541"	"HCD"	"MS2"	"30.00776"	"49.2"	"100.000"	"77.7909"	"26144"	"26144"	"26121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.8"	""	"84.4"	""	"71.8"	""	"49.2"	"0.6"	"93.2"	"94.1"	""	"890"	"50"	"36.000"	"29.000"	"0.000406780392454261"	"18"	"0"	"4.548E-06"	"1.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAILGIHNEVSK"	"[R].lAILGIHNEVSk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.9038"	"0.0000"	"1"	"1"	"1"	"584.69769"	"1752.07853"	"1752.07838"	"0.09"	"0.00005"	"16/100"	"16"	"100"	"11205783.8827515"	"HCD"	"MS2"	"18.58729"	"304.8"	"100.000"	"47.2563"	"13773"	"13773"	"13746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"436.8"	""	"412.9"	""	"371.0"	""	"476.5"	"0.3"	"604.9"	"588.0"	""	"339"	"52"	"32.000"	"25.000"	"9.91219192624895E-05"	"21"	"0"	"2.722E-06"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAILGIHNEVSK"	"[R].lAILGIHNEVSk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"584.69794"	"1752.07926"	"1752.07838"	"0.50"	"0.00029"	"13/100"	"13"	"100"	"10988721.8353882"	"HCD"	"MS2"	"15.13767"	"313.0"	"100.000"	"46.9858"	"13614"	"13614"	"13592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"448.7"	""	"412.8"	""	"372.1"	""	"479.5"	""	"620.1"	"638.4"	""	"335"	"48"	"32.000"	"25.000"	"0.000264859046577789"	"20"	"0"	"8.798E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLATLSIPITPER"	"[R].vLLATLSIPITPER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"584.69861"	"1752.08127"	"1752.08324"	"-1.12"	"-0.00066"	"13/120"	"13"	"120"	"1456243.48168945"	"HCD"	"MS2"	"39.07547"	"36.3"	"100.000"	"77.7496"	"26127"	"26127"	"26105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.4"	""	"62.5"	""	"56.8"	""	"45.9"	""	"58.4"	"64.1"	""	"335"	"16"	"32.000"	"25.000"	"0.419773299882879"	"20"	"0.0001889"	"0.0004575"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLATLSIPITPER"	"[R].vLLATLSIPITPER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.69879"	"1752.08182"	"1752.08324"	"-0.81"	"-0.00047"	"12/120"	"12"	"120"	"1451201.69445801"	"HCD"	"MS2"	"31.33239"	"31.6"	"100.000"	"77.6888"	"26153"	"26153"	"26133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.9"	""	"52.4"	""	"57.5"	""	"41.4"	""	"47.5"	"57.8"	""	"334"	"21"	"32.000"	"25.000"	"0.143455258091401"	"14"	"7.476E-05"	"0.0001995"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLATLSIPITPER"	"[R].vLLATLSIPITPER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"876.54529"	"1752.08330"	"1752.08324"	"0.04"	"0.00003"	"9/120"	"9"	"120"	"276835.607788086"	"HCD"	"MS2"	"29.16278"	"14.1"	"100.000"	"77.4497"	"26005"	"26005"	"25977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.7"	""	"17.4"	""	"17.3"	""	"25.3"	""	"27.0"	"28.1"	""	"320"	"47"	"32.000"	"25.000"	"0.000322195879977982"	"22"	"0"	"3.115E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLATLSIPITPER"	"[R].vLLATLSIPITPER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.69940"	"1752.08365"	"1752.08324"	"0.24"	"0.00014"	"13/120"	"13"	"120"	"1731746.4119873"	"HCD"	"MS2"	"11.08305"	"16.2"	"100.000"	"77.4382"	"26000"	"26000"	"25977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.3"	""	"21.5"	""	"23.3"	""	"28.5"	"1.2"	"27.5"	"31.8"	""	"320"	"43"	"32.000"	"25.000"	"0.00071964776782926"	"15"	"0"	"5.7E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLATLSIPITPER"	"[R].vLLATLSIPITPER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"876.54584"	"1752.08440"	"1752.08324"	"0.66"	"0.00058"	"9/120"	"9"	"120"	"300074.058898926"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"77.4323"	"26049"	"26049"	"26021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.2"	""	"21.1"	""	"23.2"	""	"28.8"	""	"28.1"	"27.4"	""	"314"	"60"	"31.000"	"24.000"	"1.52019623433016E-05"	"16"	"0"	"2.887E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLATLSIPITPER"	"[R].vLLATLSIPITPER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"584.69971"	"1752.08457"	"1752.08324"	"0.76"	"0.00044"	"14/120"	"14"	"120"	"1557882.08001709"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"77.3818"	"26028"	"26028"	"26005"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.4"	""	"17.9"	""	"25.8"	""	"19.1"	""	"29.8"	"27.9"	""	"310"	"64"	"31.000"	"24.000"	"6.43178766083262E-06"	"21"	"0"	"4.748E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLYDIDVAK"	"[K].kLYDIDVAk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.70050"	"1752.08695"	"1752.08743"	"-0.28"	"-0.00016"	"7/84"	"7"	"84"	"9651094.3503418"	"HCD"	"MS2"	"18.03635"	"476.8"	"83.042"	"41.8479"	"11575"	"11575"	"11554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"752.2"	""	"742.3"	""	"757.7"	""	"801.4"	"2.1"	"748.7"	"699.8"	""	"298"	"34"	"31.000"	"24.000"	"0.00569096963551669"	"15"	"0"	"0.0001318"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLYDIDVAK"	"[K].kLYDIDVAk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"P62752"	"60S ribosomal protein L23a OS=Rattus norvegicus OX=10116 GN=Rpl23a PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.70074"	"1752.08768"	"1752.08743"	"0.14"	"0.00008"	"8/84"	"8"	"84"	"11387781.5039673"	"HCD"	"MS2"	"24.73512"	"669.8"	"94.785"	"41.5794"	"11421"	"11421"	"11403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1029.5"	""	"1011.1"	""	"1053.0"	""	"1191.4"	""	"1084.0"	"962.7"	""	"304"	"21"	"31.000"	"24.000"	"0.108104454075306"	"14"	"7.476E-05"	"0.0001905"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVWDTAGQEK"	"[K].fNVWDTAGQEk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"584.98206"	"1752.93161"	"1752.93211"	"-0.28"	"-0.00016"	"13/108"	"13"	"108"	"9503042.04431152"	"HCD"	"MS2"	"3.849276"	"256.0"	"100.000"	"51.1801"	"15370"	"15370"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"464.6"	""	"359.9"	""	"375.2"	""	"414.6"	"2.6"	"419.0"	"383.1"	""	"1124"	"54"	"37.000"	"30.000"	"0.000201250197651681"	"30"	"0"	"0.0001297"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVWDTAGQEK"	"[K].fNVWDTAGQEk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.7551"	"0.0000"	"1"	"1"	"1"	"584.98218"	"1752.93198"	"1752.93211"	"-0.07"	"-0.00004"	"13/108"	"13"	"108"	"9574986.94458008"	"HCD"	"MS2"	"6.25358"	"267.2"	"100.000"	"50.9356"	"15220"	"15220"	"15202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"495.4"	""	"363.1"	""	"392.2"	""	"428.6"	"3.6"	"455.1"	"386.5"	""	"1127"	"49"	"37.000"	"30.000"	"0.000655985017572811"	"27"	"0"	"0.0001153"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVWDTAGQEK"	"[K].fNVWDTAGQEk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.5800"	"0.0000"	"1"	"1"	"1"	"876.96979"	"1752.93230"	"1752.93211"	"0.11"	"0.00010"	"10/108"	"10"	"108"	"1308552.86804199"	"HCD"	"MS2"	"0"	"121.7"	"100.000"	"51.0463"	"15316"	"15316"	"15286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"247.7"	""	"185.5"	"2.0"	"172.5"	""	"181.5"	""	"205.4"	"159.9"	""	"1127"	"50"	"37.000"	"30.000"	"0.000620717400926587"	""	"0"	"2.546E-05"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVWDTAGQEK"	"[K].fNVWDTAGQEk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"876.97015"	"1752.93303"	"1752.93211"	"0.53"	"0.00046"	"20/108"	"20"	"108"	"1658898.87768555"	"HCD"	"MS2"	"0"	"148.4"	"100.000"	"50.8669"	"15192"	"15192"	"15170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"307.8"	""	"200.6"	""	"211.7"	""	"232.0"	"2.4"	"237.8"	"208.3"	""	"1125"	"76"	"37.000"	"30.000"	"1.55640467554398E-06"	"30"	"0"	"2.831E-06"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEESNFPFIK"	"[K].iAEESNFPFIk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"585.00214"	"1752.99186"	"1752.99364"	"-1.02"	"-0.00060"	"11/94"	"11"	"94"	"2719901.07489014"	"HCD"	"MS2"	"24.60424"	"94.1"	"100.000"	"62.8166"	"20050"	"20050"	"20025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.7"	""	"137.9"	""	"128.4"	""	"153.4"	""	"173.9"	"182.9"	""	"933"	"35"	"36.000"	"29.000"	"0.0134540069620856"	"16"	"0.0001889"	"0.0006527"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEESNFPFIK"	"[K].iAEESNFPFIk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"877.00024"	"1752.99321"	"1752.99364"	"-0.25"	"-0.00022"	"17/94"	"17"	"94"	"733029.106506348"	"HCD"	"MS2"	"0"	"59.9"	"100.000"	"62.7897"	"20092"	"20092"	"20067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.5"	""	"95.5"	""	"88.1"	""	"79.8"	"1.2"	"114.9"	"96.0"	""	"923"	"63"	"36.000"	"29.000"	"2.49558120039386E-05"	"23"	"0"	"8.282E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEESNFPFIK"	"[K].iAEESNFPFIk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"585.00269"	"1752.99350"	"1752.99364"	"-0.08"	"-0.00005"	"10/94"	"10"	"94"	"2454010.20568848"	"HCD"	"MS2"	"17.28572"	"80.6"	"100.000"	"62.9004"	"20137"	"20137"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.8"	""	"109.5"	""	"111.8"	""	"123.0"	""	"153.5"	"163.8"	""	"924"	"32"	"36.000"	"29.000"	"0.0296238824382345"	"19"	"0.0001889"	"0.0008612"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSELLGPYGMK"	"[R].sLSELLGPYGMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"585.00299"	"1752.99442"	"1752.99701"	"-1.48"	"-0.00087"	"11/94"	"11"	"94"	"2759222.89086914"	"HCD"	"MS2"	"0"	"87.0"	"100.000"	"69.8349"	"22908"	"22908"	"22885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.3"	""	"122.6"	""	"127.0"	""	"135.8"	""	"161.4"	"171.6"	""	"923"	"31"	"36.000"	"29.000"	"0.0378592237708211"	"21"	"0.0001308"	"0.0002275"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEESNFPFIK"	"[K].iAEESNFPFIk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"877.00085"	"1752.99443"	"1752.99364"	"0.45"	"0.00039"	"7/94"	"7"	"94"	"748767.735351563"	"HCD"	"MS2"	"0"	"66.6"	"100.000"	"62.6990"	"20002"	"20002"	"19977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.8"	""	"93.5"	""	"98.9"	""	"102.8"	""	"121.5"	"106.9"	""	"923"	"28"	"36.000"	"29.000"	"0.0741603388265443"	"20"	"0"	"0.0001552"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSELLGPYGMK"	"[R].sLSELLGPYGMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"877.00104"	"1752.99480"	"1752.99701"	"-1.26"	"-0.00111"	"10/94"	"10"	"94"	"684263.429199219"	"HCD"	"MS2"	"0"	"59.7"	"100.000"	"69.6742"	"22894"	"22894"	"22873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.3"	""	"88.6"	""	"105.5"	""	"68.7"	"1.1"	"106.7"	"107.8"	""	"900"	"59"	"36.000"	"29.000"	"5.60031575297123E-05"	"29"	"0"	"6.127E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSELLGPYGMK"	"[R].sLSELLGPYGMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"3"	"3"	"0.6512"	"0.0000"	"1"	"1"	"1"	"585.00323"	"1752.99515"	"1752.99701"	"-1.06"	"-0.00062"	"12/94"	"12"	"94"	"2970823.10900879"	"HCD"	"MS2"	"47.61842"	"84.2"	"100.000"	"69.7339"	"22918"	"22918"	"22897"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.2"	""	"112.4"	""	"121.2"	""	"125.7"	"2.6"	"166.0"	"157.3"	""	"906"	"43"	"36.000"	"29.000"	"0.00236645473616601"	""	"0"	"0.0001392"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSELLGPYGMK"	"[R].sLSELLGPYGMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"877.00299"	"1752.99870"	"1752.99701"	"0.96"	"0.00085"	"16/94"	"16"	"94"	"679939.431335449"	"HCD"	"MS2"	"0"	"59.3"	"100.000"	"69.8716"	"22923"	"22923"	"22901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.1"	""	"95.6"	""	"94.7"	""	"75.7"	"0.5"	"101.3"	"109.4"	""	"892"	"51"	"36.000"	"29.000"	"0.000323098438193445"	"29"	"0"	"4.43E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEFPHILTLIGR"	"[K].tQEFPHILTLIGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"3"	"3"	"0.9836"	"0.0000"	"1"	"1"	"1"	"585.34320"	"1754.01505"	"1754.01622"	"-0.67"	"-0.00039"	"11/134"	"11"	"134"	"4163619.72973633"	"HCD"	"MS2"	"14.89681"	"59.3"	"100.000"	"60.1241"	"19004"	"19004"	"18979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.4"	""	"89.6"	""	"83.1"	""	"98.0"	""	"99.4"	"116.3"	""	"708"	"61"	"35.000"	"28.000"	"2.79900234311938E-05"	"17"	"0"	"2.061E-06"	"1.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEFPHILTLIGR"	"[K].tQEFPHILTLIGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.34393"	"1754.01725"	"1754.01622"	"0.58"	"0.00034"	"10/134"	"10"	"134"	"3525359.63763428"	"HCD"	"MS2"	"6.655279"	"51.7"	"100.000"	"59.9862"	"18894"	"18894"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.6"	""	"62.2"	""	"71.1"	""	"85.4"	""	"99.9"	"100.9"	""	"699"	"45"	"35.000"	"28.000"	"0.0010800582536635"	"15"	"0"	"1.476E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTHLFALTEVK"	"[K].hTHLFALTEVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.9032"	"0.0000"	"1"	"1"	"1"	"439.26324"	"1754.03115"	"1754.03651"	"-3.06"	"-0.00134"	"5/94"	"5"	"94"	"13520038.0510864"	"HCD"	"MS2"	"13.16244"	"336.2"	"100.000"	"36.7640"	"9493"	"9493"	"9462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"347.7"	""	"365.3"	""	"182.0"	""	"1081.3"	"10.1"	"963.6"	"247.1"	""	"628"	"31"	"34.000"	"27.000"	"0.0232236056368287"	"17"	"0"	"0.0001422"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTHLFALTEVK"	"[K].hTHLFALTEVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.9130"	"0.0000"	"1"	"1"	"1"	"439.26416"	"1754.03481"	"1754.03651"	"-0.97"	"-0.00043"	"6/94"	"6"	"94"	"11270421.4391479"	"HCD"	"MS2"	"4.085049"	"301.1"	"100.000"	"36.7921"	"9461"	"9461"	"9434"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"337.1"	""	"385.3"	""	"221.4"	""	"873.9"	""	"794.0"	"257.6"	""	"610"	"23"	"34.000"	"27.000"	"0.139733275447933"	"16"	"0.0001859"	"0.0003284"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKDSLYAQGK"	"[K].gkDSLYAQGk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.35181"	"1754.04087"	"1754.04155"	"-0.39"	"-0.00023"	"8/90"	"8"	"90"	"2293931.94158936"	"HCD"	"MS2"	"19.73005"	"159.3"	"100.000"	"31.0615"	"7166"	"7166"	"7136"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"371.7"	""	"292.4"	""	"280.4"	""	"220.2"	""	"190.3"	"147.7"	""	"540"	"20"	"34.000"	"27.000"	"0.266295461120427"	"14"	"0"	"0.0001592"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKDSLYAQGK"	"[K].gkDSLYAQGk.[R]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.35217"	"1754.04197"	"1754.04155"	"0.24"	"0.00014"	"8/90"	"8"	"90"	"1885088.90551758"	"HCD"	"MS2"	"13.95853"	"134.6"	"100.000"	"30.9858"	"7093"	"7093"	"7064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"283.5"	""	"240.7"	""	"244.6"	""	"186.5"	"0.1"	"169.3"	"141.2"	""	"544"	"15"	"34.000"	"27.000"	"0.940955107687052"	"13"	"0.0001308"	"0.0002435"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKLPAVVTADLR"	"[R].lkLPAVVTADLR.[L]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"1"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"585.38135"	"1754.12949"	"1754.13041"	"-0.53"	"-0.00031"	"10/112"	"10"	"112"	"10736555.3374634"	"HCD"	"MS2"	"9.672103"	"311.0"	"100.000"	"54.8543"	"16801"	"16801"	"16780"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"575.5"	""	"450.9"	""	"502.2"	""	"472.0"	"1.1"	"472.6"	"461.6"	""	"99"	"28"	"26.000"	"19.000"	"0.00756145198827846"	"18"	"0"	"5.971E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKLPAVVTADLR"	"[R].lkLPAVVTADLR.[L]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"1"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"585.38159"	"1754.13022"	"1754.13041"	"-0.11"	"-0.00006"	"10/112"	"10"	"112"	"10283395.2207031"	"HCD"	"MS2"	"5.305143"	"314.9"	"100.000"	"55.0169"	"16921"	"16921"	"16901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"601.4"	""	"476.9"	""	"521.9"	""	"471.3"	"1.5"	"442.9"	"454.1"	""	"99"	"28"	"26.000"	"19.000"	"0.00763141724210032"	"18"	"0"	"6.56E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFENIQNWMK"	"[K].sFENIQNWMk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35286"	"Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"P35286"	"Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"877.96735"	"1754.92742"	"1754.93000"	"-1.47"	"-0.00129"	"12/88"	"12"	"88"	"349962.742736816"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"61.2330"	"19457"	"19457"	"19427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.1"	""	"46.3"	""	"56.5"	""	"55.5"	"0.1"	"63.1"	"69.0"	""	"1139"	"28"	"37.000"	"30.000"	"0.0953879967897057"	"16"	"0.0001889"	"0.0004528"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFENIQNWMK"	"[K].sFENIQNWMk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35286"	"Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"P35286"	"Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"877.96851"	"1754.92974"	"1754.93000"	"-0.15"	"-0.00013"	"10/88"	"10"	"88"	"282150.399291992"	"HCD"	"MS2"	"14.04342"	"37.5"	"100.000"	"61.0903"	"19345"	"19345"	"19321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.3"	""	"58.7"	""	"51.7"	""	"50.3"	"0.2"	"64.3"	"72.9"	""	"1129"	"27"	"37.000"	"30.000"	"0.102485859163543"	"17"	"0.0001859"	"0.0003143"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYNQYIHFK"	"[K].aLYNQYIHFk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.0667"	"0.0000"	"1"	"1"	"1"	"585.67126"	"1754.99924"	"1754.99940"	"-0.09"	"-0.00005"	"9/86"	"9"	"86"	"6661953.98999023"	"HCD"	"MS2"	"6.191662"	"225.0"	"100.000"	"47.9216"	"14045"	"14045"	"14018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.1"	""	"269.1"	""	"277.0"	""	"467.4"	""	"419.6"	"433.7"	""	"868"	"15"	"36.000"	"29.000"	"1.42721607800177"	"14"	"0.0001889"	"0.0004735"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDFLVDSINK"	"[R].vFDFLVDSINk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.67493"	"1755.01023"	"1755.00929"	"0.53"	"0.00031"	"8/92"	"8"	"92"	"370707.390441895"	"HCD"	"MS2"	"38.19694"	"13.5"	"100.000"	"85.0330"	"29098"	"29098"	"29067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.8"	""	"16.0"	""	"20.1"	""	"23.3"	""	"25.6"	"29.5"	""	"791"	"7"	"35.000"	"28.000"	"8.43619263149471"	"13"	"0.0001889"	"0.0008725"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"878.46521"	"1755.92314"	"1755.92271"	"0.24"	"0.00021"	"13/138"	"13"	"138"	"2328757.17504883"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"52.3260"	"15789"	"15789"	"15762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.3"	""	"96.8"	""	"98.0"	""	"127.5"	"0.1"	"150.8"	"146.3"	""	"1028"	"64"	"37.000"	"30.000"	"2.29595366365595E-05"	"25"	"0"	"8.977E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"878.46545"	"1755.92363"	"1755.92271"	"0.52"	"0.00046"	"12/138"	"12"	"138"	"2017653.60845947"	"HCD"	"MS2"	"0"	"75.3"	"100.000"	"52.4920"	"15907"	"15907"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.5"	""	"101.7"	""	"87.4"	""	"134.5"	""	"150.5"	"150.8"	""	"1032"	"51"	"37.000"	"30.000"	"0.000410818224815336"	"20"	"0"	"4.078E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.46558"	"1755.92388"	"1755.92271"	"0.66"	"0.00058"	"4/138"	"4"	"138"	"223196.485046387"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"52.6479"	"15921"	"15921"	"15890"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.4"	""	"20.7"	""	"24.8"	""	"27.6"	""	"32.4"	"28.0"	""	"1039"	"7"	"37.000"	"30.000"	"9.85338726069191"	"13"	"0.001966"	"0.02962"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSMVTLGcLVk.[G]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"585.98993"	"1755.95523"	"1755.95714"	"-1.09"	"-0.00064"	"6/118"	"6"	"118"	"1739277.75048828"	"HCD"	"MS2"	"8.419209"	"64.6"	"100.000"	"65.5030"	"21147"	"21147"	"21129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.0"	""	"107.4"	""	"100.2"	""	"78.7"	""	"118.2"	"117.5"	""	"1017"	"41"	"37.000"	"30.000"	"0.00419074231484111"	"17"	"0"	"1.2E-05"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSMVTLGcLVk.[G]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"585.98993"	"1755.95523"	"1755.95714"	"-1.09"	"-0.00064"	"11/118"	"11"	"118"	"7861503.92694092"	"HCD"	"MS2"	"0.7720259"	"213.8"	"100.000"	"65.1682"	"21063"	"21063"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"336.2"	""	"401.2"	""	"411.3"	""	"212.3"	""	"315.2"	"345.1"	""	"1017"	"37"	"37.000"	"30.000"	"0.0107223741424108"	"19"	"0"	"1.762E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSMVTLGcLVk.[G]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"585.98999"	"1755.95542"	"1755.95714"	"-0.98"	"-0.00057"	"7/118"	"7"	"118"	"1566031.72924805"	"HCD"	"MS2"	"6.067971"	"57.1"	"100.000"	"65.4928"	"21196"	"21196"	"21171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.2"	""	"88.0"	""	"94.0"	""	"66.9"	""	"98.4"	"108.4"	""	"1018"	"53"	"37.000"	"30.000"	"0.000286231734521888"	"19"	"0"	"1.255E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSMVTLGcLVk.[G]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9277"	"0.0000"	"1"	"1"	"1"	"878.48181"	"1755.95635"	"1755.95714"	"-0.45"	"-0.00040"	"11/118"	"11"	"118"	"1926723.39257813"	"HCD"	"MS2"	"22.01488"	"154.8"	"100.000"	"65.1771"	"21067"	"21067"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.8"	""	"287.5"	""	"286.2"	""	"143.0"	""	"233.6"	"261.8"	""	"1017"	"83"	"37.000"	"30.000"	"2.79441534356603E-07"	"24"	"0"	"1.931E-06"	"1.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSMVTLGcLVk.[G]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"878.48230"	"1755.95732"	"1755.95714"	"0.10"	"0.00009"	"8/118"	"8"	"118"	"1282612.05847168"	"HCD"	"MS2"	"10.47019"	"113.2"	"100.000"	"65.1576"	"21006"	"21006"	"20985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.9"	""	"214.4"	""	"212.4"	""	"104.0"	"1.5"	"159.3"	"179.5"	""	"1019"	"60"	"37.000"	"30.000"	"5.37210123711347E-05"	"19"	"0"	"3.021E-06"	"1.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSMVTLGcLVk.[G]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"585.99072"	"1755.95761"	"1755.95714"	"0.27"	"0.00016"	"8/118"	"8"	"118"	"7517962.06140137"	"HCD"	"MS2"	"8.826263"	"182.8"	"100.000"	"65.1946"	"21021"	"21021"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"318.2"	""	"346.2"	""	"346.9"	""	"183.6"	"1.1"	"260.8"	"267.0"	""	"1016"	"51"	"37.000"	"30.000"	"0.000369712140704707"	"21"	"0"	"2.878E-06"	"1.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSMVTLGcLVk.[G]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"878.48248"	"1755.95769"	"1755.95714"	"0.31"	"0.00027"	"10/118"	"10"	"118"	"387198.938659668"	"HCD"	"MS2"	"32.12038"	"39.3"	"100.000"	"65.4755"	"21136"	"21136"	"21113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.1"	""	"60.9"	""	"73.6"	""	"46.8"	"0.1"	"58.6"	"67.9"	""	"1018"	"47"	"37.000"	"30.000"	"0.00104644831335593"	"19"	"0"	"1.196E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLQDIVIGIIK"	"[R].eGLQDIVIGIIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"878.55115"	"1756.09502"	"1756.09844"	"-1.95"	"-0.00171"	"15/112"	"15"	"112"	"298202.095214844"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"81.3727"	"27656"	"27656"	"27630"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.8"	""	"39.3"	""	"32.4"	""	"39.7"	""	"34.6"	"40.5"	""	"249"	"46"	"30.000"	"23.000"	"0.000325214088622701"	"18"	"0"	"6.482E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLQDIVIGIIK"	"[R].eGLQDIVIGIIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.55219"	"1756.09709"	"1756.09844"	"-0.77"	"-0.00067"	"10/112"	"10"	"112"	"150395.313049316"	"HCD"	"MS2"	"13.26539"	"8.6"	"100.000"	"81.6821"	"27782"	"27782"	"27758"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"13.4"	""	"11.9"	""	"13.7"	""	"17.3"	"17.4"	""	"249"	"24"	"30.000"	"23.000"	"0.0509529521363864"	"14"	"0.0003839"	"0.001567"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLQDIVIGIIK"	"[R].eGLQDIVIGIIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"586.03729"	"1756.09732"	"1756.09844"	"-0.64"	"-0.00037"	"12/112"	"12"	"112"	"882204.726196289"	"HCD"	"MS2"	"16.61578"	"28.0"	"100.000"	"81.3426"	"27644"	"27644"	"27614"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.1"	""	"37.4"	""	"40.4"	""	"52.8"	"0.7"	"48.3"	"49.1"	""	"243"	"29"	"30.000"	"23.000"	"0.0159065603644428"	"19"	"0"	"0.0001308"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLQDIVIGIIK"	"[R].eGLQDIVIGIIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"586.03766"	"1756.09842"	"1756.09844"	"-0.01"	"-0.00001"	"13/112"	"13"	"112"	"1076562.06848145"	"HCD"	"MS2"	"32.69842"	"32.3"	"100.000"	"81.3567"	"27599"	"27599"	"27568"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.6"	""	"48.0"	""	"40.7"	""	"56.3"	""	"58.7"	"61.1"	""	"238"	"38"	"30.000"	"23.000"	"0.00199318202247146"	"20"	"0"	"4.121E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLQDIVIGIIK"	"[R].eGLQDIVIGIIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"878.55286"	"1756.09844"	"1756.09844"	"0.00"	"0.00000"	"11/112"	"11"	"112"	"141238.289978027"	"HCD"	"MS2"	"15.71501"	"10.7"	"100.000"	"81.6916"	"27735"	"27735"	"27712"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.3"	""	"14.9"	""	"11.9"	""	"13.3"	""	"25.0"	"23.4"	""	"238"	"31"	"30.000"	"23.000"	"0.0106058861637916"	"18"	"0.0005564"	"0.003523"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLQDIVIGIIK"	"[R].eGLQDIVIGIIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"878.55347"	"1756.09966"	"1756.09844"	"0.69"	"0.00061"	"17/112"	"17"	"112"	"340918.182250977"	"HCD"	"MS2"	"19.80036"	"28.0"	"100.000"	"81.3776"	"27607"	"27607"	"27584"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.4"	""	"46.5"	""	"40.8"	""	"38.9"	""	"55.2"	"49.7"	""	"220"	"70"	"30.000"	"23.000"	"1.0289462415623E-06"	""	"0"	"1.273E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].snSMVTLGcLVk.[G]"	"N-Term(TMT6plex); N2(Deamidated); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"586.31732"	"1756.93741"	"1756.94116"	"-2.13"	"-0.00125"	"8/118"	"8"	"118"	"4159297.49438477"	"HCD"	"MS2"	"5.206164"	"121.3"	"100.000"	"71.7498"	"23741"	"23741"	"23722"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.7"	""	"208.9"	""	"185.9"	""	"135.0"	""	"217.9"	"207.6"	""	"1021"	"47"	"37.000"	"30.000"	"0.00094405162998831"	"20"	"0"	"4.292E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].snSMVTLGcLVk.[G]"	"N-Term(TMT6plex); N2(Deamidated); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.31818"	"1756.93998"	"1756.94116"	"-0.67"	"-0.00039"	"16/118"	"16"	"118"	"4530576.29107666"	"HCD"	"MS2"	"35.22843"	"127.2"	"100.000"	"71.8572"	"23733"	"23733"	"23715"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.0"	""	"198.9"	""	"205.3"	""	"135.4"	""	"218.0"	"254.3"	""	"1026"	"52"	"37.000"	"30.000"	"0.000335055973508153"	"16"	"0"	"4.17E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].snSMVTLGcLVk.[G]"	"N-Term(TMT6plex); N2(Deamidated); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.97375"	"1756.94023"	"1756.94116"	"-0.53"	"-0.00046"	"11/118"	"11"	"118"	"1086771.46514893"	"HCD"	"MS2"	"0"	"98.6"	"100.000"	"71.8297"	"23722"	"23722"	"23699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.1"	""	"169.0"	""	"155.0"	""	"99.3"	""	"163.8"	"173.4"	""	"1015"	"61"	"37.000"	"30.000"	"4.14415553464485E-05"	"16"	"0"	"6.846E-06"	"1.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAVDATVNQVLASR"	"[K].lAAVDATVNQVLASR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.9103"	"0.0000"	"1"	"1"	"1"	"586.34174"	"1757.01065"	"1757.01186"	"-0.69"	"-0.00040"	"21/142"	"21"	"142"	"8690200.30426025"	"HCD"	"MS2"	"16.77336"	"94.0"	"100.000"	"68.6910"	"22492"	"22492"	"22474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.4"	"7.5"	"136.4"	""	"139.3"	""	"124.6"	"2.5"	"162.9"	"177.6"	""	"823"	"78"	"36.000"	"29.000"	"6.8134933996771E-07"	"25"	"0"	"2.578E-06"	"1.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAVDATVNQVLASR"	"[K].lAAVDATVNQVLASR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.9390"	"0.0000"	"1"	"1"	"1"	"879.00916"	"1757.01103"	"1757.01186"	"-0.47"	"-0.00041"	"14/142"	"14"	"142"	"1929467.60644531"	"HCD"	"MS2"	"7.769654"	"100.3"	"100.000"	"68.6933"	"22493"	"22493"	"22474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.8"	""	"134.6"	""	"139.2"	""	"149.0"	"0.3"	"183.6"	"198.9"	""	"820"	"82"	"36.000"	"29.000"	"2.44221478846894E-07"	"23"	"0"	"2.819E-07"	"1.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAVDATVNQVLASR"	"[K].lAAVDATVNQVLASR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.8941"	"0.0000"	"1"	"1"	"1"	"586.34247"	"1757.01285"	"1757.01186"	"0.56"	"0.00033"	"20/142"	"20"	"142"	"11482601.8109131"	"HCD"	"MS2"	"12.11951"	"85.3"	"85.292"	"68.7733"	"22475"	"22475"	"22458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.6"	"8.1"	"116.4"	""	"123.2"	""	"112.5"	"1.5"	"161.9"	"168.8"	""	"811"	"85"	"36.000"	"29.000"	"1.30014221108697E-07"	"27"	"0"	"1.43E-06"	"1.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAVDATVNQVLASR"	"[K].lAAVDATVNQVLASR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.9324"	"0.0000"	"1"	"1"	"1"	"879.01007"	"1757.01286"	"1757.01186"	"0.57"	"0.00050"	"14/142"	"14"	"142"	"2548146.61291504"	"HCD"	"MS2"	"5.342296"	"119.2"	"100.000"	"68.7778"	"22476"	"22476"	"22458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.5"	""	"154.0"	""	"164.2"	""	"193.8"	"0.6"	"226.6"	"231.8"	""	"811"	"74"	"36.000"	"29.000"	"1.69820790655316E-06"	"22"	"0"	"6.975E-07"	"1.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAVDATVNQVLASR"	"[K].lAAVDATVNQVLASR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.34412"	"1757.01780"	"1757.01186"	"3.38"	"0.00198"	"16/142"	"16"	"142"	"3345075.83337402"	"HCD"	"MS2"	"45.2697"	"78.1"	"100.000"	"68.3938"	"22371"	"22371"	"22346"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.9"	""	"101.4"	""	"93.0"	""	"134.6"	""	"146.5"	"170.2"	""	"767"	"43"	"35.000"	"28.000"	"0.00207857341469023"	"15"	"0"	"6.485E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAVDATVNQVLASR"	"[K].lAAVDATVNQVLASR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.34631"	"1757.02439"	"1757.01186"	"7.13"	"0.00417"	"13/142"	"13"	"142"	"2523721.65045166"	"HCD"	"MS2"	"78.50224"	"70.6"	"100.000"	"68.4803"	"22355"	"22355"	"22330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.5"	""	"92.2"	""	"99.5"	""	"105.8"	""	"146.8"	"140.5"	""	"722"	"11"	"35.000"	"28.000"	"2.9343181633524"	"13"	"0.0001859"	"0.0003259"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAVDATVNQVLASR"	"[K].lAAVDATVNQVLASR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"879.01593"	"1757.02458"	"1757.01186"	"7.24"	"0.00636"	"14/142"	"14"	"142"	"658949.464355469"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"68.4030"	"22375"	"22375"	"22346"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.0"	""	"54.9"	""	"55.2"	""	"71.4"	""	"67.4"	"80.9"	""	"716"	"86"	"35.000"	"28.000"	"8.54836439282918E-08"	"22"	"0"	"4.184E-06"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAVDATVNQVLASR"	"[K].lAAVDATVNQVLASR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.01642"	"1757.02556"	"1757.01186"	"7.80"	"0.00685"	"11/142"	"11"	"142"	"454429.504516602"	"HCD"	"MS2"	"19.41965"	"41.3"	"100.000"	"68.4895"	"22359"	"22359"	"22330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.3"	""	"56.0"	""	"60.2"	""	"62.0"	""	"80.4"	"78.7"	""	"713"	"4"	"35.000"	"28.000"	"13.0634995361953"	"13"	"0.004726"	"0.1366"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLAPGNSAGAFLIR"	"[R].qLLAPGNSAGAFLIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.8472"	"0.0000"	"1"	"1"	"1"	"879.01764"	"1757.02800"	"1757.02712"	"0.50"	"0.00044"	"14/140"	"14"	"140"	"1415075.12219238"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"60.8579"	"19303"	"19303"	"19283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.4"	""	"77.5"	""	"61.2"	""	"114.6"	"0.9"	"108.1"	"111.0"	""	"686"	"72"	"35.000"	"28.000"	"1.98286944260161E-06"	"28"	"0"	"3.648E-06"	"1.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLAPGNSAGAFLIR"	"[R].qLLAPGNSAGAFLIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"879.01807"	"1757.02886"	"1757.02712"	"0.99"	"0.00087"	"13/140"	"13"	"140"	"1269783.43450928"	"HCD"	"MS2"	"0"	"54.8"	"100.000"	"60.6898"	"19181"	"19181"	"19161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.1"	""	"82.4"	""	"57.1"	""	"105.1"	""	"102.6"	"113.3"	""	"689"	"58"	"35.000"	"28.000"	"4.87740957195215E-05"	"27"	"0"	"3.432E-06"	"1.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLVGIDIFTGK"	"[K].vHLVGIDIFTGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.36127"	"1757.06925"	"1757.07256"	"-1.89"	"-0.00110"	"13/94"	"13"	"94"	"2087100.7479248"	"HCD"	"MS2"	"12.16077"	"79.4"	"100.000"	"62.3283"	"19904"	"19904"	"19875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.9"	""	"103.4"	""	"128.9"	""	"135.0"	""	"147.1"	"153.3"	""	"396"	"42"	"32.000"	"25.000"	"0.00136353154676167"	"15"	"0"	"4.383E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSITPGTVLIILTGR"	"[R].sSITPGTVLIILTGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.03918"	"1757.07109"	"1757.07340"	"-1.31"	"-0.00115"	"20/136"	"20"	"136"	"370567.04876709"	"HCD"	"MS2"	"3.577919"	"15.5"	"100.000"	"82.9265"	"28289"	"28289"	"28269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.1"	""	"22.5"	""	"24.1"	""	"25.2"	""	"29.3"	"32.2"	""	"423"	"57"	"33.000"	"26.000"	"4.05798438651766E-05"	"16"	"0"	"0.0001046"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLVGIDIFTGK"	"[K].vHLVGIDIFTGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.36188"	"1757.07108"	"1757.07256"	"-0.84"	"-0.00049"	"15/94"	"15"	"94"	"11856112.6358032"	"HCD"	"MS2"	"23.8696"	"263.1"	"100.000"	"61.9597"	"19753"	"19753"	"19731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.9"	""	"356.3"	""	"416.1"	""	"493.5"	"0.9"	"474.4"	"476.9"	""	"423"	"54"	"33.000"	"26.000"	"7.82186600235263E-05"	"16"	"0"	"2E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSITPGTVLIILTGR"	"[R].sSITPGTVLIILTGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"879.03949"	"1757.07170"	"1757.07340"	"-0.97"	"-0.00085"	"6/136"	"6"	"136"	"285242.996948242"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"82.6125"	"28161"	"28161"	"28141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.6"	""	"21.6"	""	"19.8"	""	"27.1"	""	"24.9"	"28.7"	""	"405"	"36"	"33.000"	"26.000"	"0.00480203175396485"	"17"	"0.0001889"	"0.0004895"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSITPGTVLIILTGR"	"[R].sSITPGTVLIILTGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.36224"	"1757.07218"	"1757.07340"	"-0.70"	"-0.00041"	"15/136"	"15"	"136"	"2191356.5402832"	"HCD"	"MS2"	"7.243424"	"14.4"	"100.000"	"82.6931"	"28194"	"28194"	"28173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.9"	"2.6"	"18.1"	""	"21.0"	""	"24.1"	""	"22.3"	"31.6"	""	"382"	"74"	"32.000"	"25.000"	"6.79255818466763E-07"	"17"	"0"	"1.234E-05"	"1.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSITPGTVLIILTGR"	"[R].sSITPGTVLIILTGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.36237"	"1757.07254"	"1757.07340"	"-0.49"	"-0.00029"	"15/136"	"15"	"136"	"844144.960327148"	"HCD"	"MS2"	"5.2307"	"7.8"	"100.000"	"83.0049"	"28321"	"28321"	"28301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.2"	""	"9.6"	""	"10.2"	""	"12.6"	""	"19.5"	"12.5"	""	"384"	"80"	"32.000"	"25.000"	"1.75914334103424E-07"	"18"	"0"	"7.776E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSITPGTVLIILTGR"	"[R].sSITPGTVLIILTGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.36261"	"1757.07328"	"1757.07340"	"-0.07"	"-0.00004"	"19/136"	"19"	"136"	"745990.056091309"	"HCD"	"MS2"	"1.524506"	"8.5"	"100.000"	"82.9801"	"28260"	"28260"	"28240"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.7"	""	"9.8"	""	"13.6"	""	"14.1"	""	"17.3"	"18.4"	""	"381"	"58"	"32.000"	"25.000"	"2.73460737053872E-05"	"16"	"0"	"2.155E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSITPGTVLIILTGR"	"[R].sSITPGTVLIILTGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.36261"	"1757.07328"	"1757.07340"	"-0.07"	"-0.00004"	"15/136"	"15"	"136"	"1907954.13037109"	"HCD"	"MS2"	"17.98725"	"17.0"	"100.000"	"82.6662"	"28132"	"28132"	"28112"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.0"	"3.4"	"23.2"	""	"21.6"	""	"25.4"	""	"34.2"	"31.9"	""	"381"	"54"	"32.000"	"25.000"	"8.16384931357123E-05"	"16"	"0"	"3.134E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLVGIDIFTGK"	"[K].vHLVGIDIFTGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.36261"	"1757.07328"	"1757.07256"	"0.41"	"0.00024"	"13/94"	"13"	"94"	"2669947.81591797"	"HCD"	"MS2"	"24.19763"	"85.4"	"100.000"	"62.1414"	"19774"	"19774"	"19753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.6"	""	"119.8"	""	"129.8"	""	"138.9"	""	"153.9"	"166.6"	""	"381"	"49"	"32.000"	"25.000"	"0.000264176985400095"	"16"	"0"	"4.241E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLVGIDIFTGK"	"[K].vHLVGIDIFTGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.36261"	"1757.07328"	"1757.07256"	"0.41"	"0.00024"	"13/94"	"13"	"94"	"10228821.2266235"	"HCD"	"MS2"	"28.05483"	"242.2"	"100.000"	"61.7893"	"19630"	"19630"	"19609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.8"	""	"331.3"	""	"376.5"	""	"441.5"	""	"450.3"	"465.9"	""	"381"	"47"	"32.000"	"25.000"	"0.000398928422839595"	"15"	"0"	"1.996E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSITPGTVLIILTGR"	"[R].sSITPGTVLIILTGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.04047"	"1757.07366"	"1757.07340"	"0.15"	"0.00013"	"8/136"	"8"	"136"	"281182.541687012"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"82.6080"	"28109"	"28109"	"28080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.4"	""	"21.3"	""	"24.4"	""	"26.9"	""	"28.9"	"27.2"	""	"374"	"24"	"32.000"	"25.000"	"0.0685238264591449"	"14"	"0.0002277"	"0.001284"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSITPGTVLIILTGR"	"[R].sSITPGTVLIILTGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.04108"	"1757.07488"	"1757.07340"	"0.84"	"0.00074"	"20/136"	"20"	"136"	"393314.90222168"	"HCD"	"MS2"	"5.936747"	"16.9"	"100.000"	"82.9017"	"28228"	"28228"	"28208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.9"	""	"24.9"	""	"30.7"	""	"29.7"	""	"25.3"	"31.2"	""	"376"	"53"	"32.000"	"25.000"	"0.000103790558584782"	"16"	"0"	"0.0001164"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQGEKPLAGAK"	"[R].aQGEkPLAGAk.[I]"	"N-Term(TMT6plex); K5(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.36652"	"1757.08500"	"1757.08883"	"-2.18"	"-0.00128"	"6/98"	"6"	"98"	"3363268.77471924"	"HCD"	"MS2"	"7.996595"	"221.5"	"100.000"	"29.2786"	"6437"	"6437"	"6413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"360.9"	""	"288.6"	""	"303.3"	""	"341.0"	""	"414.0"	"396.0"	""	"337"	"1"	"32.000"	"25.000"	"14.7774638362702"	"13"	"0.0002277"	"0.001138"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KKPAATPK"	"[K].kkPAATPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.39807"	"1757.17966"	"1757.18189"	"-1.27"	"-0.00074"	"5/70"	"5"	"70"	"2519367.47033691"	"HCD"	"MS2"	"0"	"143.6"	"100.000"	"24.7557"	"4634"	"4634"	"4611"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.5"	""	"279.6"	""	"362.4"	""	"146.0"	""	"206.7"	"130.0"	""	"54"	"3"	"24.000"	"17.000"	"1.248428757778"	"13"	"0.003698"	"0.08576"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KKPAATPK"	"[K].kkPAATPk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.39825"	"1757.18021"	"1757.18189"	"-0.96"	"-0.00056"	"3/70"	"3"	"70"	"1351428.4407959"	"HCD"	"MS2"	"7.731807"	"86.2"	"100.000"	"24.7426"	"4594"	"4594"	"4571"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.2"	""	"156.0"	""	"209.1"	""	"89.4"	"0.7"	"127.1"	"87.1"	""	"54"	"2"	"24.000"	"17.000"	"1.71934790645137"	"13"	"0.00373"	"0.08641"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPNPYADYNK"	"[R].aFPNPYADYNk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.46613"	"1757.92497"	"1757.92629"	"-0.75"	"-0.00066"	"8/94"	"8"	"94"	"431371.977539063"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"46.4563"	"13398"	"13398"	"13368"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.4"	""	"43.8"	""	"51.3"	""	"58.3"	"0.7"	"63.6"	"69.6"	""	"1058"	"55"	"37.000"	"30.000"	"0.000152916965777133"	"16"	"0"	"7.563E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPNPYADYNK"	"[R].aFPNPYADYNk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"879.46637"	"1757.92546"	"1757.92629"	"-0.47"	"-0.00041"	"9/94"	"9"	"94"	"630284.766174316"	"HCD"	"MS2"	"100"	"52.7"	"100.000"	"46.6793"	"13537"	"13537"	"13506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.5"	""	"63.0"	""	"78.5"	""	"79.8"	"1.6"	"92.7"	"94.6"	""	"1069"	"42"	"37.000"	"30.000"	"0.00373205219979248"	"20"	"0.0001889"	"0.0006365"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEFPINLK"	"[R].fYEEFPINLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"586.66711"	"1757.98679"	"1757.98783"	"-0.59"	"-0.00035"	"7/78"	"7"	"78"	"2207890.93292236"	"HCD"	"MS2"	"27.53121"	"83.0"	"100.000"	"71.4661"	"23573"	"23573"	"23555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.9"	""	"118.2"	""	"115.1"	""	"131.8"	""	"140.7"	"164.8"	""	"1018"	"17"	"37.000"	"30.000"	"1.11871067524748"	"22"	"0.0005564"	"0.003483"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEFPINLK"	"[R].fYEEFPINLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"0"	"3"	"3"	"0.4737"	"0.0000"	"1"	"1"	"1"	"586.66748"	"1757.98789"	"1757.98783"	"0.03"	"0.00002"	"9/78"	"9"	"78"	"2205487.57122803"	"HCD"	"MS2"	"31.55573"	"88.2"	"100.000"	"71.4046"	"23600"	"23600"	"23578"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.1"	""	"125.2"	""	"122.3"	""	"148.0"	""	"150.0"	"167.4"	""	"1020"	"19"	"37.000"	"30.000"	"0.596444689420134"	"23"	"0.0003839"	"0.001723"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEFPINLK"	"[R].fYEEFPINLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"879.49780"	"1757.98833"	"1757.98783"	"0.28"	"0.00025"	"10/78"	"10"	"78"	"531004.842834473"	"HCD"	"MS2"	"0"	"48.7"	"100.000"	"71.3425"	"23575"	"23575"	"23546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.1"	""	"68.6"	""	"79.6"	""	"76.6"	""	"81.6"	"81.1"	""	"995"	"25"	"36.000"	"29.000"	"0.166262032412992"	"16"	"0.0001889"	"0.0004819"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEFPINLK"	"[R].fYEEFPINLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"Q32KJ6"	"N-acetylgalactosamine-6-sulfatase OS=Rattus norvegicus OX=10116 GN=Galns PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"879.49951"	"1757.99175"	"1757.98783"	"2.23"	"0.00196"	"10/78"	"10"	"78"	"419929.757446289"	"HCD"	"MS2"	"20.42947"	"39.0"	"100.000"	"71.3763"	"23537"	"23537"	"23507"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.2"	""	"57.3"	""	"55.3"	""	"57.8"	"1.7"	"58.2"	"74.3"	""	"981"	"25"	"36.000"	"29.000"	"0.15368766477768"	"18"	"0.0001889"	"0.0006872"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLQTLPEIVAK"	"[K].sTLQTLPEIVAk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.54242"	"1758.07756"	"1758.07771"	"-0.08"	"-0.00007"	"12/118"	"12"	"118"	"690616.199768066"	"HCD"	"MS2"	"80.11018"	"65.6"	"100.000"	"56.4885"	"17524"	"17524"	"17493"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.2"	""	"68.7"	""	"89.4"	""	"101.2"	""	"77.0"	"221.1"	""	"463"	"6"	"33.000"	"26.000"	"5.54052597607847"	"13"	"0.0008125"	"0.007877"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYGTGSLALYEK"	"[R].vYGTGSLALYEk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"880.00256"	"1758.99785"	"1759.00421"	"-3.61"	"-0.00318"	"11/102"	"11"	"102"	"2196662.79345703"	"HCD"	"MS2"	"0"	"188.2"	"100.000"	"51.2628"	"15354"	"15354"	"15330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.4"	""	"253.7"	""	"264.4"	""	"323.1"	""	"371.8"	"379.2"	""	"985"	"50"	"36.000"	"29.000"	"0.000535064619631405"	"24"	"0"	"4.045E-06"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYGTGSLALYEK"	"[R].vYGTGSLALYEk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"880.00366"	"1759.00005"	"1759.00421"	"-2.37"	"-0.00208"	"11/102"	"11"	"102"	"2241969.46112061"	"HCD"	"MS2"	"0"	"182.9"	"100.000"	"51.4581"	"15484"	"15484"	"15462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.0"	""	"254.2"	""	"255.2"	""	"290.4"	""	"382.6"	"353.4"	""	"954"	"51"	"36.000"	"29.000"	"0.000416407342721129"	"24"	"0"	"6.446E-06"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYGTGSLALYEK"	"[R].vYGTGSLALYEk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"587.00568"	"1759.00248"	"1759.00421"	"-0.98"	"-0.00058"	"12/102"	"12"	"102"	"7440538.4541626"	"HCD"	"MS2"	"5.904876"	"265.8"	"92.297"	"51.3410"	"15386"	"15386"	"15362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"329.5"	""	"373.0"	""	"399.9"	""	"410.9"	""	"500.8"	"506.1"	""	"969"	"28"	"36.000"	"29.000"	"0.0776772391789325"	"15"	"0"	"0.0001729"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYGTGSLALYEK"	"[R].vYGTGSLALYEk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"587.00574"	"1759.00266"	"1759.00421"	"-0.88"	"-0.00052"	"13/102"	"13"	"102"	"9783619.2678833"	"HCD"	"MS2"	"24.56668"	"305.7"	"100.000"	"51.4973"	"15500"	"15500"	"15478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.8"	""	"438.1"	""	"448.9"	""	"475.4"	"4.3"	"561.0"	"581.0"	""	"971"	"43"	"36.000"	"29.000"	"0.00260129277222727"	"19"	"0"	"7.553E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSPLQQNLLK"	"[R].fLSPLQQNLLk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"587.03339"	"1759.08561"	"1759.08821"	"-1.48"	"-0.00087"	"7/90"	"7"	"90"	"2877649.23608398"	"HCD"	"MS2"	"0"	"84.4"	"100.000"	"67.6470"	"22066"	"22066"	"22042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.6"	""	"96.1"	""	"123.6"	""	"148.9"	"2.4"	"156.3"	"153.3"	""	"379"	"40"	"32.000"	"25.000"	"0.001895"	""	"0"	"0.0001014"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLFKPVAELR"	"[R].dLLFkPVAELR.[K]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.03400"	"1759.08744"	"1759.08821"	"-0.44"	"-0.00026"	"4/108"	"4"	"108"	"10041038.7436523"	"HCD"	"MS2"	"9.034569"	"443.3"	"96.568"	"55.8788"	"17274"	"17274"	"17253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"651.5"	""	"571.0"	""	"544.5"	""	"745.1"	""	"868.2"	"826.3"	""	"366"	"1"	"32.000"	"25.000"	"13.4725898841537"	"13"	"0.0001308"	"0.0002345"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLFKPVAELR"	"[R].dLLFkPVAELR.[K]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.03436"	"1759.08854"	"1759.08821"	"0.18"	"0.00011"	"8/108"	"8"	"108"	"10803298.4927368"	"HCD"	"MS2"	"19.00522"	"493.6"	"100.000"	"55.7069"	"17150"	"17150"	"17131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"783.6"	""	"596.3"	""	"619.6"	""	"783.6"	""	"939.4"	"960.5"	""	"351"	"10"	"32.000"	"25.000"	"1.5968977934696"	"13"	"0"	"0.000115"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVMVSNVLLINK"	"[R].aVMVSNVLLINk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.6207"	"0.0000"	"1"	"1"	"1"	"587.03461"	"1759.08927"	"1759.09158"	"-1.32"	"-0.00077"	"8/100"	"8"	"100"	"4180753.33392334"	"HCD"	"MS2"	"49.65667"	"92.2"	"100.000"	"64.1743"	"20658"	"20658"	"20627"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.0"	""	"112.1"	""	"136.4"	""	"165.1"	""	"169.7"	"188.4"	""	"342"	"29"	"32.000"	"25.000"	"0.0220290673339526"	"25"	"0"	"0.0001575"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSPLQQNLLK"	"[R].fLSPLQQNLLk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"587.03461"	"1759.08927"	"1759.08821"	"0.60"	"0.00035"	"10/90"	"10"	"90"	"2533071.86334229"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"67.7482"	"22057"	"22057"	"22029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.7"	""	"92.6"	""	"87.9"	""	"132.8"	"0.4"	"140.8"	"147.3"	""	"342"	"24"	"32.000"	"25.000"	"0.0647136819866229"	"20"	"0.0001889"	"0.0007809"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVMVSNVLLINK"	"[R].aVMVSNVLLINk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9155"	"0.0000"	"1"	"1"	"1"	"880.04895"	"1759.09062"	"1759.09158"	"-0.55"	"-0.00048"	"9/100"	"9"	"100"	"236790.155944824"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"64.2682"	"20643"	"20643"	"20617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.7"	""	"33.1"	""	"38.0"	""	"27.3"	""	"43.2"	"41.2"	""	"339"	"71"	"32.000"	"25.000"	"1.44600469325982E-06"	"23"	"0"	"2.233E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKVPVDWSK"	"[R].ikVPVDWSk.[V]"	"N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.04053"	"1759.10703"	"1759.10850"	"-0.84"	"-0.00049"	"5/82"	"5"	"82"	"11987205.0726318"	"HCD"	"MS2"	"11.17296"	"494.0"	"79.534"	"48.1052"	"14120"	"14120"	"14098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"884.3"	""	"733.8"	""	"787.1"	""	"689.7"	"14.8"	"768.5"	"788.0"	""	"293"	"18"	"31.000"	"24.000"	"0.235416893566387"	"14"	"0.0001889"	"0.0006437"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKVPVDWSK"	"[R].ikVPVDWSk.[V]"	"N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.04126"	"1759.10923"	"1759.10850"	"0.41"	"0.00024"	"5/82"	"5"	"82"	"11460710.9450073"	"HCD"	"MS2"	"14.08039"	"610.8"	"100.000"	"47.7220"	"13915"	"13915"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1117.9"	""	"923.8"	""	"991.5"	""	"840.4"	"4.1"	"933.9"	"955.5"	""	"256"	"18"	"31.000"	"24.000"	"0.208549892177885"	"14"	"0.0001889"	"0.000459"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGQVEWTGK"	"[R].nPWGQVEWTGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8413"	"0.0000"	"1"	"1"	"1"	"880.47845"	"1759.94963"	"1759.95318"	"-2.01"	"-0.00177"	"8/104"	"8"	"104"	"1160470.13580322"	"HCD"	"MS2"	"0"	"99.6"	"100.000"	"54.0293"	"16464"	"16464"	"16445"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.1"	""	"151.9"	""	"142.6"	""	"130.7"	""	"177.4"	"194.5"	""	"1161"	"63"	"37.000"	"30.000"	"2.72146168335326E-05"	"26"	"0"	"1.79E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGQVEWTGK"	"[R].nPWGQVEWTGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"880.47845"	"1759.94963"	"1759.95318"	"-2.01"	"-0.00177"	"8/104"	"8"	"104"	"1339490.86663818"	"HCD"	"MS2"	"0"	"106.9"	"100.000"	"53.8646"	"16453"	"16453"	"16439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.8"	""	"151.3"	""	"142.1"	""	"160.3"	"1.4"	"195.4"	"202.5"	""	"1161"	"60"	"37.000"	"30.000"	"5.58215927601717E-05"	"19"	"0"	"1.122E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGQVEWTGK"	"[R].nPWGQVEWTGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"880.47876"	"1759.95024"	"1759.95318"	"-1.67"	"-0.00147"	"17/104"	"17"	"104"	"2371033.60498047"	"HCD"	"MS2"	"0"	"174.4"	"100.000"	"53.7225"	"16342"	"16342"	"16328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.9"	""	"257.3"	""	"251.2"	""	"269.7"	"0.2"	"304.1"	"310.3"	""	"1162"	"39"	"37.000"	"30.000"	"0.00811290017773501"	"18"	"0"	"4.825E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGQVEWTGK"	"[R].nPWGQVEWTGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"587.32184"	"1759.95096"	"1759.95318"	"-1.26"	"-0.00074"	"13/104"	"13"	"104"	"12564386.7008667"	"HCD"	"MS2"	"7.766963"	"263.5"	"64.997"	"53.9928"	"16504"	"16504"	"16490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"390.3"	""	"389.5"	""	"379.3"	""	"382.9"	"2.5"	"451.5"	"498.4"	""	"1168"	"32"	"37.000"	"30.000"	"0.0386734438161829"	"18"	"0"	"0.0001293"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGQVEWTGK"	"[R].nPWGQVEWTGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9508"	"0.0000"	"1"	"1"	"1"	"880.47913"	"1759.95098"	"1759.95318"	"-1.25"	"-0.00110"	"8/104"	"8"	"104"	"2055590.67907715"	"HCD"	"MS2"	"0"	"151.0"	"100.000"	"54.1486"	"16566"	"16566"	"16555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.4"	"2.5"	"207.1"	""	"206.5"	""	"227.6"	"3.5"	"271.6"	"289.4"	""	"1167"	"61"	"37.000"	"30.000"	"5.12909638570821E-05"	"20"	"0"	"1.475E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVYYNEATGGK"	"[R].iSVYYNEATGGk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.8533"	"0.0000"	"1"	"1"	"1"	"880.48450"	"1759.96172"	"1759.96307"	"-0.77"	"-0.00068"	"10/114"	"10"	"114"	"2270941.09338379"	"HCD"	"MS2"	"0"	"187.2"	"100.000"	"45.3796"	"13010"	"13010"	"12987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"236.5"	""	"238.2"	""	"247.2"	""	"323.3"	""	"402.7"	"331.1"	""	"1161"	"75"	"37.000"	"30.000"	"1.83148018386897E-06"	"28"	"0"	"3.428E-06"	"1.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVYYNEATGGK"	"[R].iSVYYNEATGGk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.8305"	"0.0000"	"1"	"1"	"1"	"880.48474"	"1759.96221"	"1759.96307"	"-0.49"	"-0.00043"	"11/114"	"11"	"114"	"1563040.16485596"	"HCD"	"MS2"	"0"	"131.1"	"100.000"	"45.0878"	"12842"	"12842"	"12816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.4"	""	"175.1"	""	"169.2"	""	"215.0"	"0.1"	"265.0"	"241.4"	""	"1157"	"59"	"37.000"	"30.000"	"7.1829585994221E-05"	"26"	"0"	"7.057E-06"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVYYNEATGGK"	"[R].iSVYYNEATGGk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.32574"	"1759.96268"	"1759.96307"	"-0.22"	"-0.00013"	"12/114"	"12"	"114"	"11754328.7563477"	"HCD"	"MS2"	"20.65462"	"222.0"	"58.778"	"45.4121"	"13023"	"13023"	"13003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.2"	""	"280.6"	""	"301.1"	""	"339.0"	"0.5"	"452.7"	"426.8"	""	"1153"	"29"	"37.000"	"30.000"	"0.0669575125878957"	"14"	"0.0001889"	"0.0004921"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVYYNEATGGK"	"[R].iSVYYNEATGGk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"587.32605"	"1759.96360"	"1759.96307"	"0.30"	"0.00017"	"12/114"	"12"	"114"	"12184733.6669922"	"HCD"	"MS2"	"11.82933"	"281.3"	"73.624"	"45.1569"	"12870"	"12870"	"12848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"358.0"	""	"365.2"	""	"388.5"	""	"490.0"	"3.5"	"551.8"	"509.8"	""	"1132"	"43"	"37.000"	"30.000"	"0.00255162254770466"	"19"	"0"	"0.000134"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFYNQAIMSSK"	"[R].iFYNQAIMSSk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"880.49329"	"1759.97930"	"1759.98170"	"-1.37"	"-0.00120"	"13/96"	"13"	"96"	"371546.150756836"	"HCD"	"MS2"	"0"	"38.6"	"100.000"	"54.2771"	"16566"	"16566"	"16541"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.9"	""	"62.7"	""	"64.7"	""	"42.7"	"2.2"	"64.1"	"68.9"	""	"1077"	"37"	"37.000"	"30.000"	"0.0107940818673614"	"19"	"0"	"0.000169"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFYNQAIMSSK"	"[R].iFYNQAIMSSk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"880.49420"	"1759.98113"	"1759.98170"	"-0.32"	"-0.00029"	"10/96"	"10"	"96"	"419333.460693359"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"54.4626"	"16695"	"16695"	"16667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.9"	""	"63.3"	""	"62.2"	""	"50.3"	""	"68.7"	"84.8"	""	"1088"	"54"	"37.000"	"30.000"	"0.000235287524083045"	"20"	"0"	"1.54E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNSDLGELISK"	"[K].lLNSDLGELISk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35346"	"Focal adhesion kinase 1 OS=Rattus norvegicus OX=10116 GN=Ptk2 PE=1 SV=1"	"O35346"	"Focal adhesion kinase 1 OS=Rattus norvegicus OX=10116 GN=Ptk2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"880.53015"	"1760.05303"	"1760.05697"	"-2.24"	"-0.00197"	"7/120"	"7"	"120"	"176763.019897461"	"HCD"	"MS2"	"26.21621"	"18.3"	"100.000"	"72.0685"	"23820"	"23820"	"23793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.8"	""	"21.2"	""	"27.0"	""	"30.2"	""	"33.7"	"36.7"	""	"713"	"5"	"35.000"	"28.000"	"11.0169032169109"	"13"	"0.003788"	"0.09033"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPLFEELIK"	"[K].eLAPLFEELIk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"0"	"2"	"2"	"0.6909"	"0.0000"	"1"	"1"	"1"	"880.53320"	"1760.05913"	"1760.06099"	"-1.06"	"-0.00093"	"8/94"	"8"	"94"	"175853.657043457"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"86.8690"	"29837"	"29837"	"29809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.0"	""	"10.3"	""	"10.9"	""	"26.0"	"1.7"	"26.4"	"27.4"	""	"688"	"55"	"35.000"	"28.000"	"0.000101055148027477"	""	"0.0001308"	"0.0002323"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPLFEELIK"	"[K].eLAPLFEELIk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"587.35791"	"1760.05918"	"1760.06099"	"-1.03"	"-0.00061"	"8/94"	"8"	"94"	"728184.944519043"	"HCD"	"MS2"	"4.878303"	"24.5"	"100.000"	"86.9877"	"29936"	"29936"	"29922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.8"	""	"33.2"	""	"25.5"	""	"44.1"	"1.5"	"50.2"	"52.6"	""	"688"	"28"	"35.000"	"28.000"	"0.0500677923720196"	"24"	"0.0001308"	"0.0002619"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPLFEELIK"	"[K].eLAPLFEELIk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"880.53339"	"1760.05950"	"1760.06099"	"-0.85"	"-0.00075"	"11/94"	"11"	"94"	"133381.209594727"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"86.9460"	"29920"	"29920"	"29894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.0"	""	"8.9"	""	"11.6"	""	"21.2"	""	"20.4"	"19.4"	""	"691"	"47"	"35.000"	"28.000"	"0.000766386863040977"	""	"0.0002277"	"0.001288"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPLFEELIK"	"[K].eLAPLFEELIk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"587.35815"	"1760.05991"	"1760.06099"	"-0.62"	"-0.00036"	"12/94"	"12"	"94"	"886145.006408691"	"HCD"	"MS2"	"10.10021"	"29.0"	"100.000"	"86.9245"	"29859"	"29859"	"29838"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.6"	""	"32.7"	""	"36.1"	""	"47.0"	""	"62.1"	"62.7"	""	"691"	"27"	"35.000"	"28.000"	"0.0684617587415662"	"19"	"0"	"0.0001509"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPLFEELIK"	"[K].eLAPLFEELIk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"880.53467"	"1760.06206"	"1760.06099"	"0.61"	"0.00053"	"5/94"	"5"	"94"	"127738.505371094"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"87.1623"	"29955"	"29955"	"29943"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.8"	""	"8.2"	""	"14.2"	""	"15.5"	""	"16.5"	"22.5"	""	"650"	"4"	"35.000"	"28.000"	"12.5858734599526"	"16"	"0.004039"	"0.1046"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPLFEELIK"	"[K].eLAPLFEELIk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"Q5U204"	"Ragulator complex protein LAMTOR3 OS=Rattus norvegicus OX=10116 GN=Lamtor3 PE=2 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"880.53491"	"1760.06255"	"1760.06099"	"0.88"	"0.00078"	"11/94"	"11"	"94"	"140921.421813965"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"87.2369"	"30037"	"30037"	"30018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.0"	""	"7.6"	""	"9.8"	""	"23.8"	""	"18.7"	"18.4"	""	"650"	"36"	"35.000"	"28.000"	"0.00818245001521628"	"26"	"0.0001889"	"0.001003"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLIEAFPVLGGK"	"[K].gTLIEAFPVLGGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"880.53693"	"1760.06658"	"1760.07223"	"-3.21"	"-0.00283"	"15/102"	"15"	"102"	"477875.817626953"	"HCD"	"MS2"	"0"	"36.8"	"100.000"	"72.3757"	"23997"	"23997"	"23967"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.5"	""	"47.4"	""	"57.2"	""	"51.1"	"0.6"	"61.7"	"71.5"	""	"654"	"53"	"35.000"	"28.000"	"0.00016238568911426"	"19"	"0"	"0.00011"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLIEAFPVLGGK"	"[K].gTLIEAFPVLGGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"880.53888"	"1760.07048"	"1760.07223"	"-0.99"	"-0.00087"	"16/102"	"16"	"102"	"595173.883605957"	"HCD"	"MS2"	"0"	"44.4"	"100.000"	"72.5064"	"23999"	"23999"	"23969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.2"	""	"65.6"	""	"63.2"	""	"67.7"	""	"75.8"	"82.3"	""	"567"	"46"	"34.000"	"27.000"	"0.000713761409019635"	"21"	"0"	"5.11E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLIEAFPVLGGK"	"[K].gTLIEAFPVLGGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"587.36206"	"1760.07163"	"1760.07223"	"-0.34"	"-0.00020"	"15/102"	"15"	"102"	"2327154.85180664"	"HCD"	"MS2"	"4.893124"	"59.4"	"100.000"	"72.4034"	"24008"	"24008"	"23983"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.6"	""	"82.4"	""	"93.8"	""	"87.0"	"0.2"	"104.0"	"106.0"	""	"563"	"47"	"34.000"	"27.000"	"0.000566863376336262"	"23"	"0"	"1.57E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLIEAFPVLGGK"	"[K].gTLIEAFPVLGGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"587.36206"	"1760.07163"	"1760.07223"	"-0.34"	"-0.00020"	"13/102"	"13"	"102"	"1711576.90319824"	"HCD"	"MS2"	"37.34772"	"51.2"	"100.000"	"72.7099"	"24133"	"24133"	"24111"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.6"	""	"79.5"	""	"71.2"	""	"66.3"	""	"103.0"	"93.9"	""	"563"	"25"	"34.000"	"27.000"	"0.0980569541826373"	"21"	"0"	"0.0001652"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLIEAFPVLGGK"	"[K].gTLIEAFPVLGGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"3"	"3"	"0.7959"	"0.0000"	"1"	"1"	"1"	"587.36255"	"1760.07309"	"1760.07223"	"0.49"	"0.00029"	"12/102"	"12"	"102"	"2850530.82818604"	"HCD"	"MS2"	"8.355516"	"72.3"	"100.000"	"72.4972"	"23995"	"23995"	"23969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.5"	""	"98.6"	""	"102.2"	""	"119.2"	"1.1"	"117.0"	"138.1"	""	"550"	"49"	"34.000"	"27.000"	"0.000312847503601444"	"25"	"0"	"2.15E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLIEAFPVLGGK"	"[K].gTLIEAFPVLGGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"880.54187"	"1760.07646"	"1760.07223"	"2.41"	"0.00212"	"12/102"	"12"	"102"	"407486.618164063"	"HCD"	"MS2"	"0"	"34.7"	"100.000"	"72.6915"	"24126"	"24126"	"24095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.4"	""	"43.4"	""	"48.1"	""	"45.9"	""	"62.9"	"73.2"	""	"539"	"26"	"34.000"	"27.000"	"0.0656990015550378"	"14"	"0.0001889"	"0.0006011"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPIDGDFFSYTR"	"[K].tIPIDGDFFSYTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"587.63916"	"1760.90293"	"1760.90567"	"-1.56"	"-0.00091"	"12/118"	"12"	"118"	"6215147.00891113"	"HCD"	"MS2"	"60.64114"	"62.5"	"100.000"	"67.7183"	"22095"	"22095"	"22074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.7"	""	"78.0"	""	"87.5"	""	"102.7"	"0.1"	"112.7"	"122.7"	""	"988"	"46"	"36.000"	"29.000"	"0.00130835906847171"	"19"	"0"	"1.46E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPIDGDFFSYTR"	"[K].tIPIDGDFFSYTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"880.95593"	"1760.90459"	"1760.90567"	"-0.61"	"-0.00054"	"12/118"	"12"	"118"	"2960621.6182251"	"HCD"	"MS2"	"28.08978"	"135.9"	"100.000"	"67.7740"	"22067"	"22067"	"22042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.5"	""	"173.2"	""	"200.4"	""	"219.6"	"2.6"	"241.4"	"257.0"	""	"973"	"50"	"36.000"	"29.000"	"0.000528546065889702"	"16"	"0"	"6.273E-06"	"1.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPIDGDFFSYTR"	"[K].tIPIDGDFFSYTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"587.63989"	"1760.90512"	"1760.90567"	"-0.31"	"-0.00018"	"17/118"	"17"	"118"	"4717614.5213623"	"HCD"	"MS2"	"14.39808"	"48.7"	"100.000"	"67.8384"	"22093"	"22093"	"22074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.5"	""	"66.3"	""	"66.3"	""	"86.4"	""	"94.2"	"91.2"	""	"980"	"33"	"36.000"	"29.000"	"0.0224489524490121"	"16"	"0"	"8.578E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPIDGDFFSYTR"	"[K].tIPIDGDFFSYTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"880.95673"	"1760.90618"	"1760.90567"	"0.29"	"0.00025"	"12/118"	"12"	"118"	"5646867.89886475"	"HCD"	"MS2"	"0.6416394"	"186.7"	"100.000"	"67.9415"	"22187"	"22187"	"22170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"276.8"	""	"245.5"	""	"293.3"	""	"286.0"	"1.0"	"306.0"	"358.4"	""	"994"	"55"	"36.000"	"29.000"	"0.000169182870281397"	"16"	"0"	"7.941E-06"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPIDGDFFSYTR"	"[K].tIPIDGDFFSYTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.64026"	"1760.90622"	"1760.90567"	"0.32"	"0.00019"	"10/118"	"10"	"118"	"1970023.84619141"	"HCD"	"MS2"	"9.130743"	"47.8"	"100.000"	"68.1555"	"22222"	"22222"	"22202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.4"	""	"57.5"	""	"64.3"	""	"81.9"	"4.3"	"96.1"	"95.7"	""	"994"	"32"	"36.000"	"29.000"	"0.0310710828309516"	"15"	"0"	"3.197E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPIDGDFFSYTR"	"[K].tIPIDGDFFSYTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"880.95685"	"1760.90642"	"1760.90567"	"0.43"	"0.00038"	"12/118"	"12"	"118"	"4770241.18322754"	"HCD"	"MS2"	"0"	"157.0"	"100.000"	"68.0675"	"22187"	"22187"	"22170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.4"	""	"210.2"	""	"241.1"	""	"239.4"	""	"271.4"	"306.6"	""	"994"	"53"	"36.000"	"29.000"	"0.000276284415863391"	"16"	"0"	"4.671E-06"	"1.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPIDGDFFSYTR"	"[K].tIPIDGDFFSYTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"880.95721"	"1760.90715"	"1760.90567"	"0.84"	"0.00074"	"12/118"	"12"	"118"	"3075599.73516846"	"HCD"	"MS2"	"0"	"127.9"	"100.000"	"67.6561"	"22070"	"22070"	"22042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.3"	""	"178.3"	""	"188.2"	""	"190.0"	""	"232.7"	"250.1"	""	"998"	"45"	"36.000"	"29.000"	"0.00165234429619813"	"15"	"0"	"2.72E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGQVEWTGK"	"[R].nPWGqVEWTGk.[W]"	"N-Term(TMT6plex); Q5(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.3404"	"0.0000"	"1"	"1"	"1"	"880.97986"	"1760.95244"	"1760.93719"	"8.66"	"0.00762"	"10/104"	"10"	"104"	"1508768.32305908"	"HCD"	"MS2"	"0"	"119.8"	"100.000"	"53.6790"	"16325"	"16325"	"16307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.3"	""	"179.8"	""	"164.6"	""	"179.7"	""	"218.3"	"228.6"	""	"1115"	"47"	"37.000"	"30.000"	"0.00122530687907754"	"15"	"0.0002723"	"0.001389"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGQVEWTGK"	"[R].nPWGqVEWTGk.[W]"	"N-Term(TMT6plex); Q5(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"587.65576"	"1760.95273"	"1760.93719"	"8.83"	"0.00518"	"12/104"	"12"	"104"	"11301857.7807617"	"HCD"	"MS2"	"46.78936"	"190.6"	"58.577"	"53.7845"	"16367"	"16367"	"16356"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"277.0"	""	"277.9"	""	"283.4"	""	"272.0"	"0.2"	"348.5"	"346.0"	""	"1115"	"26"	"37.000"	"30.000"	"0.132814310416747"	"14"	"0.0003839"	"0.001724"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDSIIAEVK"	"[R].sLDLDSIIAEVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"3"	"Q6IG05"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2"	"Q6IG05; Q6P6Q2; Q4FZU2"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"881.02289"	"1761.03850"	"1761.04099"	"-1.41"	"-0.00124"	"10/106"	"10"	"106"	"520853.878540039"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"81.4558"	"27690"	"27690"	"27662"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.3"	""	"54.8"	""	"63.6"	""	"60.2"	""	"77.1"	"56.4"	""	"864"	"54"	"36.000"	"29.000"	"0.000167295302606139"	"25"	"0"	"3.121E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDSIIAEVK"	"[R].sLDLDSIIAEVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"3"	"Q6IG05"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2"	"Q6IG05; Q6P6Q2; Q4FZU2"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"3"	"3"	"0.8769"	"0.0000"	"1"	"1"	"1"	"587.68445"	"1761.03879"	"1761.04099"	"-1.25"	"-0.00073"	"9/106"	"9"	"106"	"4905336.30944824"	"HCD"	"MS2"	"7.232464"	"123.4"	"100.000"	"81.5067"	"27711"	"27711"	"27694"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"276.8"	""	"159.1"	""	"205.9"	""	"164.3"	"1.2"	"204.6"	"151.9"	""	"865"	"65"	"36.000"	"29.000"	"1.44872552435761E-05"	"24"	"0"	"9.146E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDSIIAEVK"	"[R].sLDLDSIIAEVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"3"	"Q6IG05"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2"	"Q6IG05; Q6P6Q2; Q4FZU2"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"587.68457"	"1761.03916"	"1761.04099"	"-1.04"	"-0.00061"	"13/106"	"13"	"106"	"827309.362609863"	"HCD"	"MS2"	"6.323925"	"25.7"	"100.000"	"81.9086"	"27874"	"27874"	"27854"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.6"	""	"33.6"	""	"40.9"	""	"31.5"	""	"46.3"	"39.4"	""	"865"	"43"	"36.000"	"29.000"	"0.00194978224714182"	"24"	"0"	"9.447E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDSIIAEVK"	"[R].sLDLDSIIAEVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"3"	"Q6IG05"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2"	"Q6IG05; Q6P6Q2; Q4FZU2"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"587.68463"	"1761.03934"	"1761.04099"	"-0.93"	"-0.00055"	"11/106"	"11"	"106"	"1008103.99523926"	"HCD"	"MS2"	"8.24318"	"32.1"	"100.000"	"81.8813"	"27812"	"27812"	"27792"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.2"	""	"43.7"	""	"49.0"	""	"45.7"	""	"61.3"	"51.4"	""	"865"	"41"	"36.000"	"29.000"	"0.00338054025484453"	"26"	"0"	"7.148E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDSIIAEVK"	"[R].sLDLDSIIAEVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"3"	"Q6IG05"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2"	"Q6IG05; Q6P6Q2; Q4FZU2"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"3"	"3"	"0.8852"	"0.0000"	"1"	"1"	"1"	"587.68469"	"1761.03952"	"1761.04099"	"-0.83"	"-0.00049"	"9/106"	"9"	"106"	"6130057.21661377"	"HCD"	"MS2"	"6.269665"	"155.1"	"100.000"	"81.5186"	"27665"	"27665"	"27648"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"346.2"	""	"191.9"	""	"252.5"	""	"214.9"	""	"268.6"	"189.3"	""	"864"	"61"	"36.000"	"29.000"	"3.53576788474229E-05"	"23"	"0"	"8.232E-06"	"1.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDSIIAEVK"	"[R].sLDLDSIIAEVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"3"	"Q6IG05"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2"	"Q6IG05; Q6P6Q2; Q4FZU2"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"2"	"2"	"0.8072"	"0.0000"	"1"	"1"	"1"	"881.02356"	"1761.03984"	"1761.04099"	"-0.65"	"-0.00057"	"19/106"	"19"	"106"	"743858.195007324"	"HCD"	"MS2"	"9.295987"	"59.5"	"100.000"	"81.4676"	"27644"	"27644"	"27616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.7"	""	"72.4"	""	"98.3"	""	"84.8"	""	"95.6"	"74.6"	""	"852"	"83"	"36.000"	"29.000"	"2.09126755241009E-07"	""	"0"	"1.527E-06"	"1.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDSIIAEVK"	"[R].sLDLDSIIAEVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"3"	"Q6IG05"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2"	"Q6IG05; Q6P6Q2; Q4FZU2"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"881.02368"	"1761.04009"	"1761.04099"	"-0.51"	"-0.00045"	"10/106"	"10"	"106"	"516978.682128906"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"81.7881"	"27825"	"27825"	"27806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.3"	""	"49.3"	""	"74.4"	""	"51.7"	""	"71.2"	"51.1"	""	"852"	"77"	"36.000"	"29.000"	"8.02434512122655E-07"	"29"	"0"	"8.786E-06"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDSIIAEVK"	"[R].sLDLDSIIAEVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"3"	"Q6IG05"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2"	"Q6IG05; Q6P6Q2; Q4FZU2"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1; Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"2"	"2"	"0.8172"	"0.0000"	"1"	"1"	"1"	"881.02380"	"1761.04033"	"1761.04099"	"-0.37"	"-0.00033"	"11/106"	"11"	"106"	"676806.895385742"	"HCD"	"MS2"	"0"	"54.1"	"100.000"	"81.7584"	"27762"	"27762"	"27744"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.5"	""	"62.2"	""	"89.7"	""	"74.5"	"1.1"	"99.2"	"70.7"	""	"854"	"93"	"36.000"	"29.000"	"1.99722905329634E-08"	""	"0"	"2.72E-06"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKPVLMMNK"	"[R].ikPVLMMNk.[M]"	"N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.70789"	"1761.10910"	"1761.10977"	"-0.38"	"-0.00022"	"7/80"	"7"	"80"	"17508792.9189453"	"HCD"	"MS2"	"42.43525"	"406.7"	"41.565"	"45.5761"	"13037"	"13037"	"13027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"602.2"	""	"511.3"	""	"617.9"	""	"560.1"	"7.0"	"744.0"	"811.3"	""	"278"	"11"	"31.000"	"24.000"	"1.13243895478897"	"13"	"0.0001859"	"0.0003401"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVVNPLFEK"	"[K].kVVNPLFEk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"1"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"587.71204"	"1761.12156"	"1761.12415"	"-1.48"	"-0.00087"	"7/80"	"7"	"80"	"49925842.387207"	"HCD"	"MS2"	"39.24635"	"387.7"	"24.051"	"41.7492"	"11491"	"11491"	"11467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"539.5"	""	"536.3"	""	"560.9"	""	"647.1"	""	"709.5"	"683.5"	""	"219"	"16"	"30.000"	"23.000"	"0.292694201748633"	"19"	"0.0001889"	"0.0006773"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLESYAFNMK"	"[K].nSLESYAFNMk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"881.46442"	"1761.92156"	"1761.92458"	"-1.71"	"-0.00151"	"10/106"	"10"	"106"	"1917259.59649658"	"HCD"	"MS2"	"0"	"187.1"	"100.000"	"53.2416"	"16157"	"16157"	"16143"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"392.0"	""	"293.2"	""	"281.5"	""	"218.8"	""	"287.1"	"295.5"	""	"1078"	"68"	"37.000"	"30.000"	"9.3452035478948E-06"	"17"	"0"	"4.226E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLESYAFNMK"	"[K].nSLESYAFNMk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"587.97882"	"1761.92191"	"1761.92458"	"-1.51"	"-0.00089"	"8/106"	"8"	"106"	"13277306.8979492"	"HCD"	"MS2"	"13.12768"	"255.8"	"66.906"	"53.3217"	"16187"	"16187"	"16178"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"464.2"	""	"395.3"	""	"384.3"	""	"333.6"	""	"403.6"	"437.1"	""	"1073"	"49"	"37.000"	"30.000"	"0.000754344496695698"	"20"	"0"	"9.53E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLESYAFNMK"	"[K].nSLESYAFNMk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.97882"	"1761.92191"	"1761.92458"	"-1.51"	"-0.00089"	"9/106"	"9"	"106"	"9607540.73291016"	"HCD"	"MS2"	"13.13192"	"262.3"	"100.000"	"53.4272"	"16284"	"16284"	"16272"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"454.1"	""	"373.8"	""	"378.9"	""	"396.7"	""	"443.5"	"435.1"	""	"1073"	"56"	"37.000"	"30.000"	"0.000134452761425173"	"16"	"0"	"3.886E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLESYAFNMK"	"[K].nSLESYAFNMk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"881.46576"	"1761.92424"	"1761.92458"	"-0.19"	"-0.00017"	"17/106"	"17"	"106"	"1148671.21411133"	"HCD"	"MS2"	"0"	"117.3"	"100.000"	"53.5209"	"16263"	"16263"	"16252"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"214.6"	""	"178.9"	""	"186.8"	""	"134.5"	"0.6"	"185.1"	"207.6"	""	"1074"	"60"	"37.000"	"30.000"	"5.87454568688114E-05"	"16"	"0"	"1.065E-05"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLESYAFNMK"	"[K].nSLESYAFNMk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"881.46588"	"1761.92449"	"1761.92458"	"-0.05"	"-0.00005"	"14/106"	"14"	"106"	"1548677.08361816"	"HCD"	"MS2"	"100"	"158.3"	"100.000"	"53.3928"	"16271"	"16271"	"16258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"296.8"	""	"252.9"	""	"253.0"	""	"186.2"	"0.6"	"251.1"	"254.5"	""	"1071"	"43"	"37.000"	"30.000"	"0.0025104956613879"	"20"	"0"	"5.976E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLESYAFNMK"	"[K].nSLESYAFNMk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"881.46588"	"1761.92449"	"1761.92458"	"-0.05"	"-0.00005"	"15/106"	"15"	"106"	"1670294.04980469"	"HCD"	"MS2"	"22.34314"	"164.5"	"100.000"	"53.6701"	"16378"	"16378"	"16369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.0"	""	"262.6"	""	"280.8"	""	"175.5"	""	"242.8"	"279.5"	""	"1071"	"46"	"37.000"	"30.000"	"0.00125244734130208"	"15"	"0"	"4.121E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGMAVEDLVAAK"	"[K].sLGMAVEDLVAAk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"588.01044"	"1762.01676"	"1762.01848"	"-0.98"	"-0.00057"	"14/110"	"14"	"110"	"632674.716552734"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"71.1828"	"23458"	"23458"	"23427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.3"	""	"34.2"	""	"38.6"	""	"42.9"	""	"54.8"	"48.8"	""	"964"	"32"	"36.000"	"29.000"	"0.0311922740790817"	"20"	"0"	"7.698E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGMAVEDLVAAK"	"[K].sLGMAVEDLVAAk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"588.01074"	"1762.01767"	"1762.01848"	"-0.46"	"-0.00027"	"8/110"	"8"	"110"	"648701.875305176"	"HCD"	"MS2"	"21.75678"	"28.8"	"100.000"	"71.1029"	"23477"	"23477"	"23450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.3"	""	"34.1"	""	"40.1"	""	"46.6"	"0.1"	"51.0"	"60.7"	""	"948"	"35"	"36.000"	"29.000"	"0.0151278894331776"	"18"	"0"	"6.928E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYADIVQLLLAK"	"[K].gYADIVQLLLAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"588.03271"	"1762.08359"	"1762.08788"	"-2.43"	"-0.00143"	"7/98"	"7"	"98"	"182027.362792969"	"HCD"	"MS2"	"40.87291"	"6.6"	"100.000"	"93.9054"	"32360"	"32360"	"32354"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"6.8"	""	"9.3"	""	"12.8"	""	"10.6"	"17.1"	""	"400"	"29"	"33.000"	"26.000"	"0.0252365506918134"	"19"	"0.0002277"	"0.001293"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYADIVQLLLAK"	"[K].gYADIVQLLLAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"588.03326"	"1762.08524"	"1762.08788"	"-1.50"	"-0.00088"	"7/98"	"7"	"98"	"292838.597595215"	"HCD"	"MS2"	"32.95544"	"10.1"	"100.000"	"94.1918"	"32487"	"32487"	"32481"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.4"	""	"8.9"	""	"14.6"	""	"19.8"	""	"18.9"	"22.4"	""	"393"	"28"	"32.000"	"25.000"	"0.0329126275139195"	"17"	"0.0001889"	"0.0006231"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMPWNVDTLSK"	"[K].nMPWNVDTLSk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"588.32275"	"1762.95371"	"1762.95621"	"-1.42"	"-0.00083"	"11/106"	"11"	"106"	"2703746.20056152"	"HCD"	"MS2"	"2.532548"	"108.1"	"100.000"	"56.2031"	"17407"	"17407"	"17381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.5"	""	"123.7"	""	"139.1"	""	"148.3"	""	"222.2"	"240.7"	""	"1118"	"38"	"37.000"	"30.000"	"0.00873799532236292"	"21"	"0"	"0.0001231"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMPWNVDTLSK"	"[K].nMPWNVDTLSk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"881.98187"	"1762.95647"	"1762.95621"	"0.15"	"0.00013"	"10/106"	"10"	"106"	"763989.42755127"	"HCD"	"MS2"	"0"	"66.4"	"100.000"	"56.2352"	"17420"	"17420"	"17397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.3"	""	"76.5"	""	"84.0"	""	"82.5"	""	"125.4"	"153.7"	""	"1140"	"57"	"37.000"	"30.000"	"0.000109616228547879"	"25"	"0"	"6.92E-06"	"1.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMPWNVDTLSK"	"[K].nMPWNVDTLSk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"588.32391"	"1762.95719"	"1762.95621"	"0.55"	"0.00033"	"12/106"	"12"	"106"	"3327330.57220459"	"HCD"	"MS2"	"11.91961"	"118.7"	"100.000"	"55.9904"	"17266"	"17266"	"17243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.2"	""	"156.8"	""	"140.3"	""	"164.4"	""	"250.3"	"253.8"	""	"1135"	"41"	"37.000"	"30.000"	"0.00411117407342557"	"21"	"0.0001308"	"0.000226"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMPWNVDTLSK"	"[K].nMPWNVDTLSk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"881.98224"	"1762.95720"	"1762.95621"	"0.56"	"0.00049"	"9/106"	"9"	"106"	"925380.975402832"	"HCD"	"MS2"	"0"	"82.1"	"100.000"	"55.9995"	"17270"	"17270"	"17243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.7"	""	"116.1"	""	"93.6"	""	"100.8"	"0.4"	"167.7"	"182.2"	""	"1135"	"39"	"37.000"	"30.000"	"0.00666754362428184"	"22"	"0"	"0.0001651"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFWGPLELVEK"	"[K].sFWGPLELVEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"882.00977"	"1763.01225"	"1763.01438"	"-1.20"	"-0.00106"	"9/98"	"9"	"98"	"144071.605224609"	"HCD"	"MS2"	"26.32335"	"14.1"	"100.000"	"79.2953"	"26809"	"26809"	"26783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.3"	""	"18.0"	""	"17.6"	""	"21.8"	""	"27.9"	"28.0"	""	"988"	"14"	"36.000"	"29.000"	"1.84810630606394"	"19"	"0.0003839"	"0.001547"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFWGPLELVEK"	"[K].sFWGPLELVEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"882.01050"	"1763.01372"	"1763.01438"	"-0.37"	"-0.00033"	"9/98"	"9"	"98"	"156105.694519043"	"HCD"	"MS2"	"22.47601"	"15.3"	"100.000"	"79.2729"	"26749"	"26749"	"26721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.2"	""	"17.5"	""	"20.9"	""	"23.5"	""	"31.8"	"26.8"	""	"979"	"13"	"36.000"	"29.000"	"2.48744047133394"	"13"	"0.0003839"	"0.001833"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFWGPLELVEK"	"[K].sFWGPLELVEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"588.34393"	"1763.01725"	"1763.01438"	"1.63"	"0.00096"	"10/98"	"10"	"98"	"271833.191223145"	"HCD"	"MS2"	"35.66039"	"14.1"	"100.000"	"79.2797"	"26752"	"26752"	"26721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.4"	""	"13.1"	""	"18.7"	""	"23.8"	""	"21.2"	"42.8"	""	"975"	"13"	"36.000"	"29.000"	"2.494448948259"	"17"	"0.0001889"	"0.0004963"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQLLEIITTDK"	"[K].mQLLEIITTDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"0.6286"	"0.0000"	"1"	"1"	"1"	"588.35107"	"1763.03867"	"1763.03888"	"-0.12"	"-0.00007"	"10/108"	"10"	"108"	"964581.424133301"	"HCD"	"MS2"	"14.49413"	"31.5"	"100.000"	"77.5455"	"26095"	"26095"	"26069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.6"	""	"37.8"	""	"52.9"	""	"45.8"	"0.4"	"50.9"	"66.7"	""	"731"	"35"	"35.000"	"28.000"	"0.0103725940489539"	"27"	"0"	"5.393E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQLLEIITTDK"	"[K].mQLLEIITTDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"882.02313"	"1763.03899"	"1763.03888"	"0.06"	"0.00005"	"14/108"	"14"	"108"	"319469.429504395"	"HCD"	"MS2"	"26.60015"	"25.6"	"100.000"	"77.5524"	"26098"	"26098"	"26069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.6"	""	"38.7"	""	"35.1"	""	"32.1"	"0.3"	"46.9"	"54.2"	""	"732"	"53"	"35.000"	"28.000"	"0.000175582442201028"	"26"	"0"	"3.395E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQLLEIITTDK"	"[K].mQLLEIITTDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"0.7250"	"0.0000"	"1"	"1"	"1"	"588.35162"	"1763.04032"	"1763.03888"	"0.82"	"0.00048"	"11/108"	"11"	"108"	"967440.914489746"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"77.6043"	"26068"	"26068"	"26041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.8"	""	"39.4"	""	"44.1"	""	"38.1"	""	"60.3"	"65.9"	""	"706"	"40"	"35.000"	"28.000"	"0.00325667713785631"	"26"	"0"	"5.368E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQLLEIITTDK"	"[K].mQLLEIITTDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"882.02380"	"1763.04033"	"1763.03888"	"0.82"	"0.00073"	"14/108"	"14"	"108"	"283317.142883301"	"HCD"	"MS2"	"29.34353"	"22.0"	"100.000"	"77.5673"	"26053"	"26053"	"26025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.6"	""	"27.9"	""	"32.4"	""	"33.9"	""	"43.0"	"45.6"	""	"706"	"55"	"35.000"	"28.000"	"0.000124673658936561"	"26"	"0"	"5.551E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEFELAQLTK"	"[R].lLEFELAQLTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"588.36182"	"1763.07090"	"1763.07189"	"-0.57"	"-0.00033"	"8/100"	"8"	"100"	"826106.790649414"	"HCD"	"MS2"	"17.0969"	"27.5"	"100.000"	"82.4947"	"28113"	"28113"	"28094"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.0"	""	"40.4"	""	"36.9"	""	"44.8"	""	"48.2"	"53.2"	""	"486"	"57"	"33.000"	"26.000"	"4.90463026374619E-05"	"23"	"0"	"0.0001297"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEFELAQLTK"	"[R].lLEFELAQLTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"3"	"3"	"0.8868"	"0.0000"	"1"	"1"	"1"	"588.36200"	"1763.07145"	"1763.07189"	"-0.25"	"-0.00015"	"8/100"	"8"	"100"	"850592.016540527"	"HCD"	"MS2"	"13.50517"	"27.5"	"100.000"	"82.5943"	"28103"	"28103"	"28080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.1"	""	"38.3"	""	"42.0"	""	"41.5"	""	"50.4"	"52.7"	""	"479"	"53"	"33.000"	"26.000"	"0.000132222546707741"	"21"	"0"	"3.61E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEFELAQLTK"	"[R].lLEFELAQLTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"882.03955"	"1763.07182"	"1763.07189"	"-0.04"	"-0.00003"	"10/100"	"10"	"100"	"191911.726318359"	"HCD"	"MS2"	"0"	"18.9"	"100.000"	"82.4736"	"28105"	"28105"	"28078"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.9"	""	"26.9"	""	"22.6"	""	"37.9"	""	"38.0"	"34.3"	""	"491"	"35"	"33.000"	"26.000"	"0.00792595306880453"	"18"	"0.0001889"	"0.0004102"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEFELAQLTK"	"[R].lLEFELAQLTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"882.04089"	"1763.07451"	"1763.07189"	"1.48"	"0.00131"	"13/100"	"13"	"100"	"253351.048278809"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"82.4879"	"28060"	"28060"	"28032"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.1"	""	"31.6"	""	"28.1"	""	"36.5"	""	"43.2"	"39.0"	""	"459"	"48"	"33.000"	"26.000"	"0.00034736230651611"	"16"	"0"	"3.484E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNFFGTQDVCK"	"[K].tNFFGTQDVck.[E]"	"N-Term(TMT6plex); C10(Methylthio); K11(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"882.44629"	"1763.88530"	"1763.88608"	"-0.44"	"-0.00039"	"12/112"	"12"	"112"	"357027.871643066"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"58.1235"	"18138"	"18138"	"18107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.0"	""	"54.5"	""	"65.7"	""	"65.0"	"1.3"	"63.9"	"75.7"	""	"849"	"15"	"36.000"	"29.000"	"1.24990698354757"	"15"	"0.0005564"	"0.003526"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGDESVPGSPFK"	"[K].wGDESVPGSPFk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"882.47052"	"1763.93376"	"1763.93686"	"-1.75"	"-0.00155"	"11/100"	"11"	"100"	"420174.214294434"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"54.3758"	"16606"	"16606"	"16577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.7"	""	"36.3"	""	"55.0"	""	"58.6"	"1.7"	"71.9"	"90.9"	""	"1069"	"32"	"37.000"	"30.000"	"0.0309704638240168"	""	"0.0001859"	"0.0003696"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGDESVPGSPFK"	"[K].wGDESVPGSPFk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"882.47253"	"1763.93779"	"1763.93686"	"0.53"	"0.00047"	"10/100"	"10"	"100"	"429830.89050293"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"54.5706"	"16739"	"16739"	"16709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.0"	""	"47.5"	""	"44.5"	""	"69.6"	"0.2"	"67.0"	"90.8"	""	"1068"	"24"	"37.000"	"30.000"	"0.228844909892233"	""	"0.0001889"	"0.0009965"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAAGSIADCLAK"	"[K].qLAAGSIADcLAk.[C]"	"N-Term(TMT6plex); C10(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"882.98877"	"1764.97026"	"1764.97523"	"-2.82"	"-0.00249"	"19/126"	"19"	"126"	"472656.80267334"	"HCD"	"MS2"	"40.09536"	"44.4"	"100.000"	"65.2715"	"21106"	"21106"	"21075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.2"	""	"75.4"	""	"63.1"	""	"64.2"	"0.2"	"72.3"	"83.0"	""	"1147"	"74"	"37.000"	"30.000"	"2.22604234895637E-06"	"19"	"0"	"1.156E-06"	"1.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"882.98993"	"1764.97258"	"1764.97588"	"-1.87"	"-0.00165"	"7/82"	"7"	"82"	"115758.708374023"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"80.3616"	"27244"	"27244"	"27215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.0"	""	"11.6"	""	"12.2"	""	"11.1"	""	"20.5"	"24.6"	""	"1164"	"15"	"37.000"	"30.000"	"2.02732317350959"	"16"	"0.0009404"	"0.009979"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"588.99615"	"1764.97391"	"1764.97588"	"-1.12"	"-0.00066"	"7/82"	"7"	"82"	"1691127.48620605"	"HCD"	"MS2"	"0"	"52.1"	"100.000"	"79.7292"	"26986"	"26986"	"26959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.4"	""	"63.7"	""	"61.9"	""	"70.6"	""	"116.9"	"115.9"	""	"1153"	"33"	"37.000"	"30.000"	"0.0266562658836673"	"24"	"0.0001308"	"0.0002579"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"588.99622"	"1764.97409"	"1764.97588"	"-1.01"	"-0.00060"	"11/82"	"11"	"82"	"3225975.96087646"	"HCD"	"MS2"	"4.480419"	"93.0"	"100.000"	"80.0225"	"27105"	"27105"	"27087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.4"	""	"107.3"	""	"125.2"	""	"110.5"	""	"205.0"	"216.1"	""	"1150"	"38"	"37.000"	"30.000"	"0.00831127868178909"	"19"	"0"	"0.000144"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"882.99078"	"1764.97429"	"1764.97588"	"-0.90"	"-0.00080"	"16/82"	"16"	"82"	"547561.85345459"	"HCD"	"MS2"	"14.45718"	"47.8"	"100.000"	"79.7367"	"26938"	"26938"	"26913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.0"	""	"61.5"	""	"52.6"	""	"66.9"	"0.3"	"105.6"	"98.2"	""	"1149"	"54"	"37.000"	"30.000"	"0.000253098769084515"	"21"	"0"	"1.786E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"882.99078"	"1764.97429"	"1764.97588"	"-0.90"	"-0.00080"	"9/82"	"9"	"82"	"1770338.77050781"	"HCD"	"MS2"	"0"	"147.1"	"100.000"	"80.0180"	"27104"	"27104"	"27087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.6"	""	"167.1"	""	"175.8"	""	"163.9"	"2.2"	"334.6"	"343.5"	""	"1149"	"57"	"37.000"	"30.000"	"0.000112276801734296"	"21"	"0"	"1.534E-05"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAAGSIADCLAK"	"[K].qLAAGSIADcLAk.[C]"	"N-Term(TMT6plex); C10(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"588.99634"	"1764.97446"	"1764.97523"	"-0.44"	"-0.00026"	"9/126"	"9"	"126"	"3088542.12530518"	"HCD"	"MS2"	"29.76084"	"83.0"	"100.000"	"65.2947"	"21115"	"21115"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.2"	""	"131.1"	""	"117.2"	""	"115.4"	"1.1"	"143.3"	"149.2"	""	"1141"	"66"	"37.000"	"30.000"	"1.42973532885482E-05"	"23"	"0"	"5.218E-06"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAAGSIADCLAK"	"[K].qLAAGSIADcLAk.[C]"	"N-Term(TMT6plex); C10(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"588.99646"	"1764.97483"	"1764.97523"	"-0.23"	"-0.00014"	"10/126"	"10"	"126"	"3088153.65802002"	"HCD"	"MS2"	"34.50148"	"85.4"	"100.000"	"65.3234"	"21074"	"21074"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.0"	""	"134.3"	""	"116.9"	""	"134.0"	"2.9"	"155.7"	"149.1"	""	"1136"	"58"	"37.000"	"30.000"	"8.63670996888058E-05"	"24"	"0"	"1.154E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"882.99109"	"1764.97490"	"1764.97588"	"-0.56"	"-0.00049"	"11/82"	"11"	"82"	"863339.73828125"	"HCD"	"MS2"	"0"	"78.6"	"100.000"	"79.7269"	"26985"	"26985"	"26959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.7"	""	"86.2"	""	"96.8"	""	"96.1"	""	"180.4"	"180.4"	""	"1136"	"25"	"37.000"	"30.000"	"0.177561308052641"	"20"	"0.0001308"	"0.0003134"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"588.99683"	"1764.97593"	"1764.97588"	"0.02"	"0.00001"	"11/82"	"11"	"82"	"3661646.63421631"	"HCD"	"MS2"	"4.265646"	"112.4"	"100.000"	"80.0347"	"27059"	"27059"	"27041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.1"	""	"134.4"	""	"146.2"	""	"141.1"	""	"240.9"	"275.7"	""	"1132"	"39"	"37.000"	"30.000"	"0.00724129818153159"	"19"	"0.0001308"	"0.0002635"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"882.99164"	"1764.97600"	"1764.97588"	"0.07"	"0.00006"	"9/82"	"9"	"82"	"2115430.58850098"	"HCD"	"MS2"	"0"	"178.4"	"100.000"	"80.0302"	"27058"	"27058"	"27041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.5"	""	"214.6"	""	"211.3"	""	"219.0"	""	"430.0"	"406.7"	""	"1132"	"52"	"37.000"	"30.000"	"0.000333285508931263"	"20"	"0"	"2.918E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"588.99707"	"1764.97666"	"1764.97588"	"0.44"	"0.00026"	"11/82"	"11"	"82"	"1339589.52697754"	"HCD"	"MS2"	"11.51801"	"46.0"	"100.000"	"79.7436"	"26941"	"26941"	"26913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.1"	""	"55.1"	""	"57.4"	"2.2"	"67.2"	""	"89.0"	"100.0"	""	"1134"	"35"	"37.000"	"30.000"	"0.01627732590008"	"19"	"0.0001308"	"0.0002291"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWMk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"882.99255"	"1764.97783"	"1764.97588"	"1.10"	"0.00097"	"7/82"	"7"	"82"	"121610.640075684"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"80.3647"	"27194"	"27194"	"27169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.6"	""	"15.6"	""	"12.8"	""	"16.4"	""	"24.4"	"22.4"	""	"1111"	"8"	"37.000"	"30.000"	"9.13448492245894"	"13"	"0.001966"	"0.03075"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPLFSPDFNEK"	"[K].iPLFSPDFNEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8CGS5"	"Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus OX=10116 GN=Elac2 PE=1 SV=1"	"Q8CGS5"	"Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus OX=10116 GN=Elac2 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"882.99854"	"1764.98979"	"1764.99364"	"-2.18"	"-0.00192"	"5/94"	"5"	"94"	"191802.712768555"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"68.9147"	"22584"	"22584"	"22554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.0"	""	"19.2"	""	"27.9"	""	"27.2"	"1.8"	"43.0"	"40.5"	""	"1056"	"17"	"37.000"	"30.000"	"1.14983075980247"	"15"	"0.003197"	"0.06642"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPLFSPDFNEK"	"[K].iPLFSPDFNEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8CGS5"	"Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus OX=10116 GN=Elac2 PE=1 SV=1"	"Q8CGS5"	"Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus OX=10116 GN=Elac2 PE=1 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"589.00208"	"1764.99167"	"1764.99364"	"-1.12"	"-0.00066"	"10/94"	"10"	"94"	"1703168.21313477"	"HCD"	"MS2"	"32.63609"	"57.1"	"100.000"	"68.9878"	"22562"	"22562"	"22538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.5"	""	"63.3"	""	"73.3"	""	"105.1"	"5.4"	"108.5"	"116.2"	""	"1072"	"26"	"37.000"	"30.000"	"0.125650664501148"	"22"	"0.0004557"	"0.002597"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVIYPILVEFTR"	"[R].dAVIYPILVEFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"589.00696"	"1765.00632"	"1765.00974"	"-1.94"	"-0.00114"	"15/118"	"15"	"118"	"712591.360961914"	"HCD"	"MS2"	"6.020574"	"8.7"	"100.000"	"85.6137"	"29381"	"29381"	"29358"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.4"	""	"11.4"	""	"11.5"	""	"14.4"	""	"16.0"	"20.1"	""	"901"	"44"	"36.000"	"29.000"	"0.00188232580174303"	"21"	"0"	"9.534E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVIYPILVEFTR"	"[R].dAVIYPILVEFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"589.00751"	"1765.00797"	"1765.00974"	"-1.00"	"-0.00059"	"14/118"	"14"	"118"	"1156197.96685791"	"HCD"	"MS2"	"3.977232"	"8.0"	"100.000"	"85.8389"	"29420"	"29420"	"29400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.5"	""	"8.6"	""	"10.6"	""	"18.8"	""	"10.8"	"17.8"	""	"918"	"42"	"36.000"	"29.000"	"0.00259306071438847"	"17"	"0"	"4.716E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVIYPILVEFTR"	"[R].dAVIYPILVEFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"589.00763"	"1765.00833"	"1765.00974"	"-0.79"	"-0.00047"	"14/118"	"14"	"118"	"568311.012390137"	"HCD"	"MS2"	"9.914559"	"8.5"	"100.000"	"85.5247"	"29297"	"29297"	"29278"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.3"	""	"9.0"	""	"10.9"	""	"12.3"	""	"14.9"	"25.0"	""	"922"	"41"	"36.000"	"29.000"	"0.00406163530456695"	"18"	"0"	"5.308E-05"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVIYPILVEFTR"	"[R].dAVIYPILVEFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.00775"	"1765.00870"	"1765.00974"	"-0.59"	"-0.00035"	"16/118"	"16"	"118"	"1029468.21240234"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"85.9066"	"29499"	"29499"	"29483"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.8"	""	"11.9"	""	"15.3"	""	"15.0"	""	"18.5"	"12.9"	""	"917"	"47"	"36.000"	"29.000"	"0.000883770172698045"	"15"	"0"	"4.995E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVIYPILVEFTR"	"[R].dAVIYPILVEFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"883.00812"	"1765.00896"	"1765.00974"	"-0.44"	"-0.00039"	"11/118"	"11"	"118"	"565848.071350098"	"HCD"	"MS2"	"4.695403"	"23.5"	"100.000"	"85.7964"	"29403"	"29403"	"29384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.8"	""	"32.3"	""	"34.2"	""	"45.7"	""	"41.5"	"37.0"	""	"920"	"50"	"36.000"	"29.000"	"0.000450565393288001"	"24"	"0"	"1.738E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVIYPILVEFTR"	"[R].dAVIYPILVEFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"883.00824"	"1765.00920"	"1765.00974"	"-0.30"	"-0.00027"	"10/118"	"10"	"118"	"553772.881103516"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"85.8769"	"29487"	"29487"	"29467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.9"	""	"27.0"	""	"27.6"	""	"43.6"	""	"36.2"	"42.3"	""	"920"	"55"	"36.000"	"29.000"	"0.000154084102012601"	"23"	"0"	"2.208E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVIYPILVEFTR"	"[R].dAVIYPILVEFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"883.00909"	"1765.01091"	"1765.00974"	"0.67"	"0.00059"	"15/118"	"15"	"118"	"188214.537780762"	"HCD"	"MS2"	"30.43126"	"8.6"	"100.000"	"85.5039"	"29289"	"29289"	"29268"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.7"	""	"10.7"	""	"13.1"	""	"13.6"	""	"19.3"	"13.8"	""	"885"	"47"	"36.000"	"29.000"	"0.000788702604595779"	"18"	"0"	"6.993E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVIYPILVEFTR"	"[R].dAVIYPILVEFTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"883.00928"	"1765.01128"	"1765.00974"	"0.87"	"0.00077"	"12/118"	"12"	"118"	"225205.442565918"	"HCD"	"MS2"	"17.81577"	"10.1"	"100.000"	"85.5834"	"29369"	"29369"	"29342"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.3"	""	"13.2"	""	"9.6"	""	"20.5"	""	"19.4"	"20.1"	""	"882"	"35"	"36.000"	"29.000"	"0.0128362624906737"	"17"	"7.476E-05"	"0.0001973"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLEAIAETAFK"	"[R].dVLEAIAETAFk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"883.01038"	"1765.01348"	"1765.01477"	"-0.73"	"-0.00065"	"7/104"	"7"	"104"	"242016.768127441"	"HCD"	"MS2"	"47.38589"	"18.6"	"100.000"	"84.4631"	"28865"	"28865"	"28844"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.4"	""	"19.3"	""	"22.2"	""	"32.4"	""	"42.3"	"43.0"	""	"874"	"30"	"36.000"	"29.000"	"0.0392176383196827"	"21"	"0.0001889"	"0.0003867"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLEAIAETAFK"	"[R].dVLEAIAETAFk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"883.01062"	"1765.01396"	"1765.01477"	"-0.46"	"-0.00040"	"7/104"	"7"	"104"	"267627.365661621"	"HCD"	"MS2"	"48.6551"	"17.6"	"100.000"	"84.5177"	"28939"	"28939"	"28913"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.2"	""	"14.7"	""	"24.8"	""	"34.8"	""	"35.3"	"40.6"	""	"865"	"33"	"36.000"	"29.000"	"0.0228026915065371"	"18"	"0.0001889"	"0.0004424"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLEAIAETAFK"	"[R].dVLEAIAETAFk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"589.00983"	"1765.01493"	"1765.01477"	"0.09"	"0.00005"	"13/104"	"13"	"104"	"1273288.52764893"	"HCD"	"MS2"	"8.64671"	"35.1"	"100.000"	"84.5477"	"28951"	"28951"	"28929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.1"	""	"41.9"	""	"40.8"	""	"61.2"	""	"75.0"	"82.4"	""	"862"	"50"	"36.000"	"29.000"	"0.000439012888251324"	"26"	"0"	"1.491E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLEAIAETAFK"	"[R].dVLEAIAETAFk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"589.00989"	"1765.01511"	"1765.01477"	"0.19"	"0.00011"	"13/104"	"13"	"104"	"1458968.31750488"	"HCD"	"MS2"	"5.139315"	"38.6"	"100.000"	"84.5393"	"28896"	"28896"	"28876"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.6"	""	"31.3"	""	"57.8"	""	"61.8"	""	"83.9"	"87.2"	""	"856"	"46"	"36.000"	"29.000"	"0.00096703850965458"	"24"	"0"	"1.622E-05"	"1.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNSINIAVFSK"	"[K].tLNSINIAVFSk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"883.03436"	"1765.06145"	"1765.06239"	"-0.53"	"-0.00047"	"16/126"	"16"	"126"	"496664.528930664"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"65.1516"	"21057"	"21057"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.5"	""	"79.0"	""	"69.5"	""	"70.7"	"0.4"	"72.1"	"74.4"	""	"472"	"47"	"33.000"	"26.000"	"0.000494210539580811"	"15"	"0"	"4.695E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNSINIAVFSK"	"[K].tLNSINIAVFSk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.02539"	"1765.06162"	"1765.06239"	"-0.44"	"-0.00026"	"13/126"	"13"	"126"	"3020737.09069824"	"HCD"	"MS2"	"29.59656"	"95.4"	"100.000"	"65.0685"	"21023"	"21023"	"20995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.0"	""	"173.6"	""	"148.0"	""	"139.7"	"1.0"	"163.8"	"144.5"	""	"472"	"36"	"33.000"	"26.000"	"0.00544392336537937"	"15"	"0"	"3.408E-05"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNSINIAVFSK"	"[K].tLNSINIAVFSk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"883.03485"	"1765.06243"	"1765.06239"	"0.02"	"0.00002"	"9/126"	"9"	"126"	"539026.144775391"	"HCD"	"MS2"	"26.25422"	"52.7"	"100.000"	"65.1344"	"20997"	"20997"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.8"	""	"102.1"	""	"85.3"	""	"79.6"	""	"75.5"	"82.1"	""	"479"	"53"	"33.000"	"26.000"	"0.000129212794092373"	"17"	"0"	"1.865E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNSINIAVFSK"	"[K].tLNSINIAVFSk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"589.02600"	"1765.06345"	"1765.06239"	"0.60"	"0.00035"	"11/126"	"11"	"126"	"2727046.1350708"	"HCD"	"MS2"	"83.25691"	"85.7"	"100.000"	"65.0975"	"20982"	"20982"	"20953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.9"	""	"142.0"	""	"128.1"	""	"133.7"	"1.2"	"145.8"	"137.4"	""	"474"	"33"	"33.000"	"26.000"	"0.0122955609226164"	"16"	"0"	"3.581E-05"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADILPLGVPHK"	"[R].fADILPLGVPHk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q64680"	"Cytochrome P450 2D4 OS=Rattus norvegicus OX=10116 GN=Cyp2d4 PE=2 SV=1"	"Q64680"	"Cytochrome P450 2D4 OS=Rattus norvegicus OX=10116 GN=Cyp2d4 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.03033"	"1765.07645"	"1765.07765"	"-0.68"	"-0.00040"	"9/88"	"9"	"88"	"3317455.11767578"	"HCD"	"MS2"	"6.724074"	"77.5"	"100.000"	"63.4388"	"20357"	"20357"	"20339"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.6"	""	"96.8"	""	"94.3"	""	"152.5"	"2.4"	"157.9"	"133.3"	""	"412"	"46"	"33.000"	"26.000"	"0.000548109362318555"	"15"	"0"	"2.226E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADILPLGVPHK"	"[R].fADILPLGVPHk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q64680"	"Cytochrome P450 2D4 OS=Rattus norvegicus OX=10116 GN=Cyp2d4 PE=2 SV=1"	"Q64680"	"Cytochrome P450 2D4 OS=Rattus norvegicus OX=10116 GN=Cyp2d4 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.03058"	"1765.07718"	"1765.07765"	"-0.26"	"-0.00016"	"13/88"	"13"	"88"	"3162415.18206787"	"HCD"	"MS2"	"13.47355"	"76.6"	"100.000"	"63.4014"	"20289"	"20289"	"20265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.3"	""	"100.3"	""	"109.0"	""	"132.9"	""	"143.5"	"162.5"	""	"404"	"50"	"33.000"	"26.000"	"0.000226126452460365"	"16"	"0"	"1.758E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDASFETK"	"[R].yALYDASFETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"589.31915"	"1765.94291"	"1765.94127"	"0.92"	"0.00054"	"11/90"	"11"	"90"	"8408789.11480713"	"HCD"	"MS2"	"25.47337"	"276.6"	"100.000"	"52.3603"	"15803"	"15803"	"15778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.9"	""	"368.3"	""	"404.2"	""	"415.2"	""	"549.5"	"555.5"	""	"1195"	"44"	"37.000"	"30.000"	"0.0025783264840459"	"24"	"0"	"0.0001347"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDASFETK"	"[R].yALYDASFETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"589.31946"	"1765.94382"	"1765.94127"	"1.44"	"0.00085"	"8/90"	"8"	"90"	"9489596.08398438"	"HCD"	"MS2"	"20.59461"	"296.7"	"100.000"	"52.5678"	"15938"	"15938"	"15910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"347.1"	"3.5"	"400.5"	""	"418.5"	""	"422.6"	""	"602.8"	"622.7"	""	"1193"	"46"	"37.000"	"30.000"	"0.00149145600825192"	"22"	"0.0001308"	"0.0002414"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDASFETK"	"[R].yALYDASFETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"883.47559"	"1765.94390"	"1765.94127"	"1.48"	"0.00131"	"9/90"	"9"	"90"	"2381417.93395996"	"HCD"	"MS2"	"0"	"218.8"	"100.000"	"52.3672"	"15806"	"15806"	"15778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.1"	""	"281.9"	""	"328.6"	""	"332.5"	"3.6"	"425.0"	"450.5"	""	"1193"	"62"	"37.000"	"30.000"	"3.64426917856174E-05"	"20"	"0"	"6.529E-06"	"1.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDASFETK"	"[R].yALYDASFETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"0.9028"	"0.0000"	"1"	"1"	"1"	"883.47626"	"1765.94524"	"1765.94127"	"2.25"	"0.00198"	"18/90"	"18"	"90"	"2470274.02764893"	"HCD"	"MS2"	"0"	"224.6"	"100.000"	"52.5724"	"15940"	"15940"	"15910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.6"	""	"287.2"	""	"341.3"	""	"341.1"	"9.6"	"424.4"	"452.1"	""	"1183"	"72"	"37.000"	"30.000"	"3.5071532948907E-06"	"24"	"0"	"5.323E-06"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSVEMDWVLK"	"[K].sNSVEMDWVLk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"883.48090"	"1765.95452"	"1765.95588"	"-0.77"	"-0.00068"	"9/110"	"9"	"110"	"252043.276184082"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"59.9194"	"18867"	"18867"	"18841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.6"	""	"33.7"	""	"26.1"	""	"37.1"	"0.4"	"49.2"	"55.1"	""	"1197"	"62"	"37.000"	"30.000"	"4.00003834664815E-05"	"21"	"0"	"2.573E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETFSQLVWK"	"[R].gLETFSQLVWk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"883.51605"	"1766.02483"	"1766.02528"	"-0.25"	"-0.00022"	"9/94"	"9"	"94"	"302802.75579834"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"74.9655"	"25002"	"25002"	"24977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.3"	""	"39.7"	""	"35.1"	""	"47.5"	"1.1"	"46.6"	"55.6"	""	"793"	"59"	"35.000"	"28.000"	"4.80002159952766E-05"	"16"	"0"	"5.229E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETFSQLVWK"	"[R].gLETFSQLVWk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"883.51617"	"1766.02507"	"1766.02528"	"-0.12"	"-0.00010"	"9/94"	"9"	"94"	"305930.245056152"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"74.9627"	"25053"	"25053"	"25023"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.0"	""	"34.8"	""	"41.3"	""	"47.2"	""	"42.4"	"53.8"	""	"763"	"54"	"35.000"	"28.000"	"0.000136299587754961"	"20"	"0"	"4.134E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAAAVIVYDITK"	"[R].gSAAAVIVYDITk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"0"	"2"	"2"	"0.9398"	"0.0000"	"1"	"1"	"1"	"883.52527"	"1766.04326"	"1766.04641"	"-1.78"	"-0.00157"	"16/116"	"16"	"116"	"411647.145690918"	"HCD"	"MS2"	"0"	"34.4"	"100.000"	"63.8096"	"20456"	"20456"	"20425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.1"	""	"46.4"	""	"49.2"	""	"60.2"	"0.8"	"66.4"	"69.7"	""	"672"	"83"	"35.000"	"28.000"	"1.86354239553858E-07"	"23"	"0"	"6.904E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAAAVIVYDITK"	"[R].gSAAAVIVYDITk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"589.35297"	"1766.04435"	"1766.04641"	"-1.17"	"-0.00069"	"11/116"	"11"	"116"	"1829470.89483643"	"HCD"	"MS2"	"0"	"68.3"	"100.000"	"63.8050"	"20454"	"20454"	"20425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.7"	""	"99.2"	""	"86.0"	""	"110.0"	"1.2"	"146.9"	"124.2"	""	"651"	"42"	"35.000"	"28.000"	"0.00192110451595935"	"22"	"0"	"2.72E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVPPVQVSPLIK"	"[-].mVPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"589.37201"	"1766.10147"	"1766.10142"	"0.03"	"0.00002"	"13/100"	"13"	"100"	"1714378.39331055"	"HCD"	"MS2"	"10.53753"	"55.4"	"100.000"	"62.7966"	"20095"	"20095"	"20067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.4"	""	"64.9"	""	"76.3"	""	"94.1"	"0.8"	"108.2"	"118.1"	""	"271"	"38"	"31.000"	"24.000"	"0.00197214705418857"	"20"	"0.0001308"	"0.0003022"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVPPVQVSPLIK"	"[-].mVPPVQVSPLIk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"P29419"	"ATP synthase subunit e, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5me PE=1 SV=3"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"589.37244"	"1766.10276"	"1766.10142"	"0.76"	"0.00045"	"13/100"	"13"	"100"	"1494184.51287842"	"HCD"	"MS2"	"0"	"54.1"	"100.000"	"62.5906"	"19958"	"19958"	"19929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.3"	""	"78.9"	""	"75.1"	""	"73.1"	"2.9"	"105.9"	"99.0"	""	"275"	"58"	"31.000"	"24.000"	"2.3458632848793E-05"	"24"	"0"	"1.648E-05"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQWDLNAWTK"	"[K].fQWDLNAWTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"883.98303"	"1766.95879"	"1766.96301"	"-2.39"	"-0.00211"	"12/98"	"12"	"98"	"263860.745849609"	"HCD"	"MS2"	"27.55937"	"27.6"	"100.000"	"74.0217"	"24669"	"24669"	"24639"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.6"	""	"37.0"	""	"41.1"	""	"49.5"	"0.7"	"45.3"	"50.6"	""	"1065"	"38"	"37.000"	"30.000"	"0.00822847989054206"	"22"	"0"	"0.0001103"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQWDLNAWTK"	"[K].fQWDLNAWTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"883.98419"	"1766.96111"	"1766.96301"	"-1.08"	"-0.00095"	"11/98"	"11"	"98"	"263728.670471191"	"HCD"	"MS2"	"39.73845"	"28.1"	"100.000"	"74.0311"	"24621"	"24621"	"24593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.2"	""	"31.6"	""	"40.6"	""	"51.3"	""	"52.1"	"53.2"	""	"1083"	"29"	"37.000"	"30.000"	"0.075613346751179"	"22"	"0.0006037"	"0.004064"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THSDQFLVSFK"	"[R].tHSDQFLVSFk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"589.66553"	"1766.98203"	"1766.98414"	"-1.20"	"-0.00070"	"12/108"	"12"	"108"	"7413889.2130127"	"HCD"	"MS2"	"21.75567"	"228.0"	"100.000"	"43.7426"	"12293"	"12293"	"12280"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.4"	""	"288.7"	""	"289.6"	""	"456.6"	""	"449.9"	"409.7"	""	"1018"	"27"	"37.000"	"30.000"	"0.104404154902221"	"21"	"0.0001859"	"0.0003179"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSVVAGFQWATK"	"[K].dSVVAGFQWATk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"883.99512"	"1766.98296"	"1766.98414"	"-0.67"	"-0.00059"	"17/116"	"17"	"116"	"395595.948974609"	"HCD"	"MS2"	"0"	"39.0"	"100.000"	"59.6573"	"18760"	"18760"	"18729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.8"	""	"46.1"	""	"52.6"	""	"63.7"	"1.9"	"78.9"	"84.8"	""	"1003"	"65"	"37.000"	"30.000"	"1.43969646188538E-05"	"17"	"0"	"2.816E-06"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSVVAGFQWATK"	"[K].dSVVAGFQWATk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8036"	"0.0000"	"1"	"1"	"1"	"589.66620"	"1766.98404"	"1766.98414"	"-0.06"	"-0.00003"	"12/116"	"12"	"116"	"6556839.70581055"	"HCD"	"MS2"	"33.68978"	"152.3"	"100.000"	"59.3283"	"18625"	"18625"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.0"	"3.1"	"176.7"	""	"191.6"	""	"282.1"	"0.9"	"320.4"	"314.9"	""	"984"	"56"	"36.000"	"29.000"	"0.000128518338636441"	"27"	"0"	"4.764E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSVVAGFQWATK"	"[K].dSVVAGFQWATk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"883.99585"	"1766.98442"	"1766.98414"	"0.16"	"0.00014"	"13/116"	"13"	"116"	"1998090.82391357"	"HCD"	"MS2"	"0"	"153.6"	"100.000"	"59.3421"	"18631"	"18631"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.4"	""	"163.6"	""	"191.2"	""	"293.4"	""	"346.1"	"324.4"	""	"985"	"39"	"36.000"	"29.000"	"0.00637391451914118"	"15"	"0"	"1.738E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSVVAGFQWATK"	"[K].dSVVAGFQWATk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"589.66650"	"1766.98496"	"1766.98414"	"0.46"	"0.00027"	"12/116"	"12"	"116"	"8622986.15948486"	"HCD"	"MS2"	"19.21096"	"180.5"	"100.000"	"59.4962"	"18747"	"18747"	"18725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.3"	"3.1"	"209.1"	""	"223.8"	""	"339.5"	""	"376.2"	"378.6"	""	"984"	"40"	"36.000"	"29.000"	"0.00494270968816971"	"23"	"0"	"0.0001613"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSVVAGFQWATK"	"[K].dSVVAGFQWATk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.9420"	"0.0000"	"1"	"1"	"1"	"883.99658"	"1766.98589"	"1766.98414"	"0.99"	"0.00087"	"11/116"	"11"	"116"	"2245862.54315186"	"HCD"	"MS2"	"0"	"162.7"	"100.000"	"59.5008"	"18749"	"18749"	"18725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"172.7"	""	"168.1"	""	"205.6"	""	"312.2"	"0.7"	"326.8"	"359.4"	""	"991"	"69"	"36.000"	"29.000"	"6.01234175405396E-06"	"21"	"0"	"2.941E-06"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THSDQFLVSFK"	"[R].tHSDQFLVSFk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"589.66711"	"1766.98679"	"1766.98414"	"1.50"	"0.00088"	"10/108"	"10"	"108"	"8194937.66168213"	"HCD"	"MS2"	"33.96294"	"205.8"	"79.420"	"44.0499"	"12468"	"12468"	"12447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.7"	""	"262.7"	""	"287.9"	""	"384.6"	""	"387.7"	"375.0"	""	"986"	"24"	"36.000"	"29.000"	"0.210788502872732"	"22"	"0.0001859"	"0.000335"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEPTLEALFGK"	"[K].gFEPTLEALFGk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"589.67377"	"1767.00675"	"1767.00929"	"-1.44"	"-0.00085"	"10/96"	"10"	"96"	"641076.984436035"	"HCD"	"MS2"	"19.72691"	"18.2"	"100.000"	"82.9354"	"28293"	"28293"	"28269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.2"	""	"24.6"	""	"21.3"	""	"35.5"	""	"31.5"	"37.5"	""	"911"	"26"	"36.000"	"29.000"	"0.118983949692884"	"16"	"0.0004166"	"0.002418"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEPTLEALFGK"	"[K].gFEPTLEALFGk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"589.67389"	"1767.00711"	"1767.00929"	"-1.23"	"-0.00073"	"10/96"	"10"	"96"	"594991.942810059"	"HCD"	"MS2"	"11.362"	"19.8"	"100.000"	"82.9567"	"28251"	"28251"	"28224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.9"	""	"20.9"	""	"30.0"	""	"33.2"	"0.9"	"37.7"	"39.9"	""	"913"	"27"	"36.000"	"29.000"	"0.0951570088133912"	"18"	"0.0001308"	"0.0002138"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMPYISTTPAK"	"[K].tVMPYISTTPAk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9322"	"0.0000"	"1"	"1"	"1"	"884.00946"	"1767.01164"	"1767.01266"	"-0.58"	"-0.00051"	"16/104"	"16"	"104"	"1534669.60131836"	"HCD"	"MS2"	"5.561647"	"98.7"	"100.000"	"47.5651"	"13899"	"13899"	"13874"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.3"	""	"191.3"	""	"167.8"	""	"97.6"	""	"123.9"	"150.8"	""	"850"	"59"	"36.000"	"29.000"	"5.25277659213918E-05"	"21"	"0"	"1.242E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMPYISTTPAK"	"[K].tVMPYISTTPAk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"589.67548"	"1767.01187"	"1767.01266"	"-0.45"	"-0.00026"	"12/104"	"12"	"104"	"9984072.26831055"	"HCD"	"MS2"	"23.54258"	"346.9"	"100.000"	"47.2276"	"13713"	"13713"	"13688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"512.5"	""	"576.7"	""	"547.3"	""	"418.2"	""	"602.0"	"631.5"	""	"853"	"49"	"36.000"	"29.000"	"0.000550705020196173"	"21"	"0"	"0.000118"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMYESLPVVAVK"	"[R].gmYESLPVVAVk.[S]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"884.00983"	"1767.01238"	"1767.01266"	"-0.16"	"-0.00014"	"11/90"	"11"	"90"	"933977.58026123"	"HCD"	"MS2"	"0"	"69.7"	"100.000"	"49.4455"	"14621"	"14621"	"14591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.4"	""	"96.2"	""	"91.4"	""	"149.9"	"0.1"	"98.1"	"100.1"	""	"862"	"60"	"36.000"	"29.000"	"4.28033016869422E-05"	"17"	"0"	"7.987E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMPYISTTPAK"	"[K].tVMPYISTTPAk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"884.01007"	"1767.01286"	"1767.01266"	"0.11"	"0.00010"	"9/104"	"9"	"104"	"1437115.19415283"	"HCD"	"MS2"	"0"	"95.8"	"100.000"	"47.1910"	"13698"	"13698"	"13672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.6"	""	"209.7"	""	"154.0"	""	"95.4"	""	"134.9"	"136.0"	""	"866"	"62"	"36.000"	"29.000"	"2.63929476504993E-05"	"21"	"0"	"8.921E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMYESLPVVAVK"	"[R].gmYESLPVVAVk.[S]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"884.01019"	"1767.01311"	"1767.01266"	"0.25"	"0.00022"	"11/90"	"11"	"90"	"1111327.67077637"	"HCD"	"MS2"	"0"	"76.4"	"100.000"	"49.7290"	"14780"	"14780"	"14750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.4"	""	"109.2"	""	"103.7"	""	"155.6"	"1.1"	"107.7"	"109.8"	""	"861"	"64"	"36.000"	"29.000"	"1.56305102578529E-05"	"18"	"0"	"6.291E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMPYISTTPAK"	"[K].tVMPYISTTPAk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"589.67596"	"1767.01334"	"1767.01266"	"0.38"	"0.00023"	"11/104"	"11"	"104"	"10290195.0491333"	"HCD"	"MS2"	"37.0486"	"318.9"	"100.000"	"47.4868"	"13867"	"13867"	"13842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"485.2"	""	"590.7"	""	"503.4"	""	"393.2"	"4.6"	"488.4"	"548.7"	""	"863"	"41"	"36.000"	"29.000"	"0.00319139676187629"	"20"	"0"	"3.748E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTVTSLLQAGYK"	"[K].qTVTSLLQAGYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"589.68536"	"1767.04154"	"1767.04166"	"-0.07"	"-0.00004"	"12/116"	"12"	"116"	"9964722.45758057"	"HCD"	"MS2"	"43.42634"	"435.3"	"100.000"	"52.9914"	"16111"	"16111"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"636.3"	""	"644.9"	""	"623.4"	""	"677.6"	"7.9"	"757.7"	"772.9"	""	"649"	"21"	"35.000"	"28.000"	"0.232924247517557"	"18"	"0.0001859"	"0.0003314"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTVTSLLQAGYK"	"[K].qTVTSLLQAGYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.9595"	"0.0000"	"1"	"1"	"1"	"884.02478"	"1767.04228"	"1767.04166"	"0.36"	"0.00031"	"11/116"	"11"	"116"	"920967.306274414"	"HCD"	"MS2"	"9.794195"	"80.1"	"100.000"	"53.0376"	"16130"	"16130"	"16102"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.0"	""	"107.0"	""	"99.4"	""	"119.6"	"0.7"	"144.4"	"143.7"	""	"654"	"74"	"35.000"	"28.000"	"1.36945495793559E-06"	"20"	"0"	"1.023E-06"	"1.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTVTSLLQAGYK"	"[K].qTVTSLLQAGYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"589.68628"	"1767.04428"	"1767.04166"	"1.49"	"0.00088"	"12/116"	"12"	"116"	"7198255.27545166"	"HCD"	"MS2"	"61.81363"	"276.8"	"100.000"	"52.8254"	"15993"	"15993"	"15970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.1"	""	"359.4"	""	"371.1"	""	"435.0"	"27.1"	"495.4"	"494.9"	""	"643"	"35"	"35.000"	"28.000"	"0.00959800511982124"	"21"	"0"	"6.173E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYGNANVWK"	"[R].kYGNANVWk.[Y]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"1"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"589.68799"	"1767.04941"	"1767.05205"	"-1.49"	"-0.00088"	"6/82"	"6"	"82"	"10979684.1270752"	"HCD"	"MS2"	"4.015375"	"573.4"	"93.410"	"35.2055"	"8853"	"8853"	"8826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"896.7"	""	"907.5"	""	"940.0"	""	"813.3"	""	"950.5"	"919.4"	""	"588"	"6"	"34.000"	"27.000"	"8.0974323878142"	"13"	"0.0001308"	"0.0002925"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYGNANVWK"	"[R].kYGNANVWk.[Y]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P62716"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.68866"	"1767.05143"	"1767.05205"	"-0.35"	"-0.00021"	"6/82"	"6"	"82"	"13149915.3048096"	"HCD"	"MS2"	"7.526357"	"806.4"	"100.000"	"35.1527"	"8788"	"8788"	"8766"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1272.3"	""	"1278.3"	""	"1328.3"	""	"1118.4"	""	"1292.6"	"1334.7"	""	"579"	"19"	"34.000"	"27.000"	"0.393231742786981"	"14"	"0.0001308"	"0.0002417"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFPVGADVPLLILR"	"[K].qFPVGADVPLLILR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"884.03906"	"1767.07085"	"1767.07301"	"-1.22"	"-0.00108"	"3/130"	"3"	"130"	"115951.691345215"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"81.7605"	"27814"	"27814"	"27790"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"8.4"	""	"6.8"	""	"9.8"	""	"13.9"	"16.0"	""	"438"	"8"	"33.000"	"26.000"	"3.34536966754138"	"14"	"0.002981"	"0.05634"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFPVGADVPLLILR"	"[K].qFPVGADVPLLILR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"884.03973"	"1767.07219"	"1767.07301"	"-0.46"	"-0.00041"	"9/130"	"9"	"130"	"300774.848937988"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"81.4977"	"27656"	"27656"	"27632"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.0"	""	"13.3"	""	"20.4"	""	"26.8"	""	"28.1"	"34.3"	""	"422"	"33"	"33.000"	"26.000"	"0.00982386657333443"	"16"	"0.0002277"	"0.001196"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFPVGADVPLLILR"	"[K].qFPVGADVPLLILR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"Q9JK71"	"Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Magi3 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"884.03998"	"1767.07268"	"1767.07301"	"-0.19"	"-0.00016"	"6/130"	"6"	"130"	"220821.39666748"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"81.4581"	"27691"	"27691"	"27662"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"14.4"	""	"13.0"	""	"20.2"	""	"19.3"	"23.0"	""	"420"	"38"	"33.000"	"26.000"	"0.00360760761303093"	"17"	"0.0004166"	"0.002254"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NKPLFFADK"	"[K].nkPLFFADk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"589.69659"	"1767.07523"	"1767.07720"	"-1.12"	"-0.00066"	"7/80"	"7"	"80"	"137183539.74707"	"HCD"	"MS2"	"26.25469"	"509.5"	"5.940"	"42.7834"	"11956"	"11956"	"11939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"728.9"	""	"651.5"	""	"712.3"	""	"835.1"	""	"927.9"	"976.6"	""	"422"	"18"	"33.000"	"26.000"	"0.336730500066951"	"14"	"0.0001889"	"0.0004497"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NKPLFFADK"	"[K].nkPLFFADk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.69672"	"1767.07560"	"1767.07720"	"-0.91"	"-0.00054"	"7/80"	"7"	"80"	"110207888.381836"	"HCD"	"MS2"	"35.15303"	"494.8"	"6.744"	"42.5224"	"11805"	"11805"	"11788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"663.4"	""	"640.2"	""	"663.9"	""	"813.5"	""	"927.1"	"984.2"	""	"414"	"15"	"33.000"	"26.000"	"0.671383007913153"	"13"	"0.0001889"	"0.0005421"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGANGQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"884.50092"	"1767.99455"	"1767.99548"	"-0.53"	"-0.00047"	"10/110"	"10"	"110"	"1239788.48828125"	"HCD"	"MS2"	"0"	"65.1"	"100.000"	"62.0837"	"19751"	"19751"	"19721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.6"	""	"103.3"	""	"78.4"	""	"104.6"	""	"118.3"	"107.7"	""	"916"	"54"	"36.000"	"29.000"	"0.00016325461910922"	"25"	"0"	"2.99E-06"	"1.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGANGQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"884.50092"	"1767.99455"	"1767.99548"	"-0.53"	"-0.00047"	"7/110"	"7"	"110"	"1346805.0501709"	"HCD"	"MS2"	"0"	"66.4"	"100.000"	"62.1716"	"19840"	"19840"	"19811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.7"	""	"102.9"	""	"89.4"	""	"110.3"	""	"118.9"	"103.8"	""	"916"	"40"	"36.000"	"29.000"	"0.0047191684316226"	"18"	"0"	"2.899E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGANGQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"590.00330"	"1767.99533"	"1767.99548"	"-0.09"	"-0.00005"	"16/110"	"16"	"110"	"5418863.67749023"	"HCD"	"MS2"	"18.57141"	"81.2"	"100.000"	"62.1601"	"19835"	"19835"	"19811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.1"	""	"122.9"	""	"129.6"	""	"143.5"	""	"123.7"	"124.2"	""	"912"	"32"	"36.000"	"29.000"	"0.0308293836778743"	"20"	"0"	"6.974E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGANGQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"590.00354"	"1767.99607"	"1767.99548"	"0.33"	"0.00019"	"15/110"	"15"	"110"	"5469820.06115723"	"HCD"	"MS2"	"15.40906"	"77.6"	"100.000"	"62.0287"	"19728"	"19728"	"19705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.5"	""	"106.4"	""	"134.8"	""	"137.0"	""	"119.7"	"118.4"	""	"905"	"40"	"36.000"	"29.000"	"0.00492740867233378"	"20"	"0"	"0.0001122"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTAPVPMPDLK"	"[R].lQTAPVPMPDLk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.02203"	"1768.05155"	"1768.04430"	"4.10"	"0.00242"	"10/122"	"10"	"122"	"5356581.0479126"	"HCD"	"MS2"	"59.05967"	"140.1"	"100.000"	"57.1053"	"17722"	"17722"	"17691"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.9"	""	"179.2"	""	"187.2"	""	"218.0"	"2.6"	"249.8"	"257.5"	""	"597"	"11"	"34.000"	"27.000"	"2.5759909650844"	"13"	"0.0001889"	"0.0009518"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSYPLDLLLK"	"[K].tFSYPLDLLLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"590.02606"	"1768.06363"	"1768.06608"	"-1.38"	"-0.00082"	"7/92"	"7"	"92"	"391970.341430664"	"HCD"	"MS2"	"34.25223"	"14.7"	"100.000"	"86.1751"	"29608"	"29608"	"29586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.2"	""	"14.1"	""	"19.4"	""	"29.4"	""	"28.9"	"30.5"	""	"480"	"27"	"33.000"	"26.000"	"0.0513110901480535"	"23"	"0.0003571"	"0.001511"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSYPLDLLLK"	"[K].tFSYPLDLLLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"884.53552"	"1768.06377"	"1768.06608"	"-1.31"	"-0.00116"	"11/92"	"11"	"92"	"218154.434448242"	"HCD"	"MS2"	"22.81496"	"17.3"	"100.000"	"86.0897"	"29573"	"29573"	"29559"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.9"	""	"23.8"	""	"21.6"	""	"32.6"	""	"34.7"	"29.7"	""	"480"	"35"	"33.000"	"26.000"	"0.00687402712777579"	"20"	"0.0001889"	"0.0005444"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSYPLDLLLK"	"[K].tFSYPLDLLLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"884.53564"	"1768.06401"	"1768.06608"	"-1.17"	"-0.00103"	"9/92"	"9"	"92"	"116392.304626465"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"86.3402"	"29622"	"29622"	"29601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"11.1"	""	"9.5"	""	"20.9"	""	"17.7"	"24.9"	""	"480"	"14"	"33.000"	"26.000"	"1.00742156157842"	"18"	"0.0003839"	"0.001671"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSYPLDLLLK"	"[K].tFSYPLDLLLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"590.02661"	"1768.06528"	"1768.06608"	"-0.45"	"-0.00027"	"8/92"	"8"	"92"	"376102.802978516"	"HCD"	"MS2"	"20.28666"	"16.5"	"100.000"	"86.0876"	"29520"	"29520"	"29505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.5"	""	"20.6"	""	"22.7"	""	"29.7"	""	"34.0"	"33.2"	""	"487"	"16"	"33.000"	"26.000"	"0.631682674675932"	"22"	"0.0005564"	"0.003585"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSYPLDLLLK"	"[K].tFSYPLDLLLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"884.53632"	"1768.06536"	"1768.06608"	"-0.41"	"-0.00036"	"6/92"	"6"	"92"	"220338.171936035"	"HCD"	"MS2"	"24.85675"	"17.7"	"100.000"	"86.0243"	"29495"	"29495"	"29480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.7"	""	"19.0"	""	"24.3"	""	"34.6"	""	"32.2"	"40.1"	""	"486"	"28"	"33.000"	"26.000"	"0.0427175438191962"	"16"	"0.0001889"	"0.0009639"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGDNLIVPGGVK"	"[K].qIGDNLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"590.02850"	"1768.07096"	"1768.07329"	"-1.32"	"-0.00078"	"13/120"	"13"	"120"	"6863647.45593262"	"HCD"	"MS2"	"33.7741"	"225.9"	"100.000"	"52.1305"	"15709"	"15709"	"15682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"330.9"	""	"335.3"	""	"334.2"	""	"339.9"	"0.8"	"386.3"	"410.4"	""	"465"	"42"	"33.000"	"26.000"	"0.00158643746387938"	"23"	"0"	"3.94E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGDNLIVPGGVK"	"[K].qIGDNLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"590.02893"	"1768.07224"	"1768.07329"	"-0.59"	"-0.00035"	"12/120"	"12"	"120"	"7027856.96813965"	"HCD"	"MS2"	"40.13121"	"226.2"	"100.000"	"52.2871"	"15823"	"15823"	"15798"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"328.1"	""	"309.4"	""	"336.7"	""	"356.0"	"0.6"	"403.1"	"407.3"	""	"456"	"38"	"33.000"	"26.000"	"0.0034114172958953"	"18"	"0"	"6.59E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGDNLIVPGGVK"	"[K].qIGDNLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"884.53979"	"1768.07231"	"1768.07329"	"-0.55"	"-0.00049"	"12/120"	"12"	"120"	"1091771.74987793"	"HCD"	"MS2"	"13.63902"	"76.8"	"100.000"	"52.1697"	"15725"	"15725"	"15698"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.7"	""	"112.2"	""	"105.2"	""	"116.9"	""	"138.9"	"148.5"	""	"452"	"42"	"33.000"	"26.000"	"0.00151393921728135"	"15"	"0"	"0.0001065"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGDNLIVPGGVK"	"[K].qIGDNLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"884.54034"	"1768.07341"	"1768.07329"	"0.07"	"0.00006"	"11/120"	"11"	"120"	"1686295.7678833"	"HCD"	"MS2"	"10.57373"	"109.5"	"100.000"	"52.3400"	"15845"	"15845"	"15814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.4"	""	"157.2"	""	"138.6"	""	"158.2"	"0.1"	"184.9"	"222.9"	""	"447"	"75"	"33.000"	"26.000"	"6.3573705751461E-07"	"17"	"0"	"5.221E-06"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGATWVVLGHSER"	"[K].dLGATWVVLGHSER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"590.32281"	"1768.95389"	"1768.95435"	"-0.26"	"-0.00015"	"17/128"	"17"	"128"	"6902240.38977051"	"HCD"	"MS2"	"21.99974"	"100.2"	"100.000"	"48.7325"	"14329"	"14329"	"14303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.7"	""	"120.5"	""	"123.3"	""	"178.5"	"1.8"	"190.6"	"200.2"	""	"1008"	"54"	"37.000"	"30.000"	"0.000181313664918494"	"19"	"0"	"1.356E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGATWVVLGHSER"	"[K].dLGATWVVLGHSER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"590.32288"	"1768.95407"	"1768.95435"	"-0.15"	"-0.00009"	"17/128"	"17"	"128"	"8810637.16650391"	"HCD"	"MS2"	"18.35285"	"129.6"	"100.000"	"49.0468"	"14505"	"14505"	"14479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.3"	""	"158.4"	""	"180.7"	""	"210.8"	"0.5"	"253.5"	"247.6"	""	"1013"	"62"	"37.000"	"30.000"	"3.4480968017838E-05"	"19"	"0"	"2.995E-06"	"1.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGAnGQR.[E]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"884.98969"	"1768.97209"	"1768.97950"	"-4.19"	"-0.00370"	"15/110"	"15"	"110"	"899685.882629395"	"HCD"	"MS2"	"26.46297"	"69.3"	"100.000"	"66.0814"	"21384"	"21384"	"21353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.1"	""	"73.3"	""	"64.8"	""	"148.0"	""	"130.1"	"148.9"	""	"1014"	"16"	"37.000"	"30.000"	"1.19400998693528"	"19"	"0.0002277"	"0.001158"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGAnGQR.[E]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"884.99207"	"1768.97685"	"1768.97950"	"-1.50"	"-0.00132"	"9/110"	"9"	"110"	"776632.706298828"	"HCD"	"MS2"	"0"	"42.9"	"100.000"	"64.3287"	"20721"	"20721"	"20691"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.7"	""	"73.6"	""	"61.1"	""	"73.1"	""	"58.2"	"72.1"	""	"988"	"48"	"36.000"	"29.000"	"0.000838932364316102"	"24"	"0"	"6.298E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGAnGQR.[E]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.3026"	"0.0000"	"1"	"1"	"1"	"884.99243"	"1768.97759"	"1768.97950"	"-1.08"	"-0.00096"	"12/110"	"12"	"110"	"1718241.13244629"	"HCD"	"MS2"	"0"	"66.2"	"100.000"	"65.7570"	"21251"	"21251"	"21225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.9"	""	"104.1"	""	"84.3"	""	"105.7"	"0.2"	"85.9"	"89.1"	""	"991"	"76"	"36.000"	"29.000"	"1.21351083633407E-06"	"23"	"0"	"1.212E-06"	"1.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGAnGQR.[E]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.1791"	"0.0000"	"1"	"1"	"1"	"884.99274"	"1768.97820"	"1768.97950"	"-0.74"	"-0.00065"	"17/110"	"17"	"110"	"1592886.88360596"	"HCD"	"MS2"	"0"	"62.5"	"100.000"	"65.6889"	"21276"	"21276"	"21251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.1"	""	"94.5"	""	"73.7"	""	"96.6"	"2.6"	"89.9"	"85.5"	""	"992"	"67"	"36.000"	"29.000"	"9.15127647913018E-06"	"18"	"0"	"1.665E-06"	"1.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGAnGQR.[E]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.0732"	"0.0000"	"1"	"1"	"1"	"590.33099"	"1768.97843"	"1768.97950"	"-0.61"	"-0.00036"	"10/110"	"10"	"110"	"5286523.59765625"	"HCD"	"MS2"	"3.319569"	"40.2"	"100.000"	"65.6844"	"21274"	"21274"	"21251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.2"	""	"62.5"	""	"55.3"	""	"62.2"	""	"62.7"	"74.0"	""	"992"	"41"	"36.000"	"29.000"	"0.00435995168348119"	"21"	"0"	"7.991E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGAnGQR.[E]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.1724"	"0.0000"	"1"	"1"	"1"	"590.33124"	"1768.97916"	"1768.97950"	"-0.19"	"-0.00011"	"13/110"	"13"	"110"	"4830713.18902588"	"HCD"	"MS2"	"8.583671"	"57.4"	"100.000"	"64.4548"	"20719"	"20719"	"20697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.4"	""	"69.2"	""	"77.9"	""	"103.8"	""	"106.7"	"109.9"	""	"988"	"58"	"36.000"	"29.000"	"8.17950361953947E-05"	"24"	"0"	"2.957E-05"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGAnGQR.[E]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.0732"	"0.0000"	"1"	"1"	"1"	"590.33136"	"1768.97953"	"1768.97950"	"0.01"	"0.00001"	"10/110"	"10"	"110"	"4360316.64575195"	"HCD"	"MS2"	"3.176999"	"39.1"	"100.000"	"65.7155"	"21234"	"21234"	"21209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.5"	""	"51.6"	""	"52.6"	""	"64.3"	"1.0"	"75.1"	"73.7"	""	"978"	"41"	"36.000"	"29.000"	"0.00433819289886562"	"20"	"0"	"4.596E-05"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGAnGQR.[E]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.1692"	"0.0000"	"1"	"1"	"1"	"590.33136"	"1768.97953"	"1768.97950"	"0.01"	"0.00001"	"13/110"	"13"	"110"	"5431972.39453125"	"HCD"	"MS2"	"14.10412"	"61.9"	"100.000"	"64.4628"	"20775"	"20775"	"20755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.8"	""	"82.2"	""	"81.9"	""	"124.2"	""	"118.5"	"106.2"	""	"978"	"65"	"36.000"	"29.000"	"1.69164355756974E-05"	"26"	"0"	"2.643E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGANGqR.[E]"	"N-Term(TMT6plex); Q13(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"884.99371"	"1768.98015"	"1768.97950"	"0.37"	"0.00032"	"5/110"	"5"	"110"	"356375.655273438"	"HCD"	"MS2"	"14.27821"	"26.3"	"100.000"	"64.6445"	"20850"	"20850"	"20819"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.8"	""	"36.2"	""	"34.9"	""	"43.1"	"0.3"	"45.1"	"43.9"	""	"974"	"22"	"36.000"	"29.000"	"0.296161745622736"	"20"	"0.0001889"	"0.0009626"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGAnGQR.[E]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"2"	"2"	"884.99371"	"1768.98015"	"1768.97950"	"0.37"	"0.00032"	"5/110"	"5"	"110"	"356375.655273438"	"HCD"	"MS2"	"14.27821"	"26.3"	"100.000"	"64.6445"	"20850"	"20850"	"20819"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.8"	""	"36.2"	""	"34.9"	""	"43.1"	"0.3"	"45.1"	"43.9"	""	"974"	"22"	"36.000"	"29.000"	"0.296161745622736"	"20"	"0.0001889"	"0.0006882"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGAnGQR.[E]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.0244"	"0.0000"	"1"	"1"	"1"	"884.99396"	"1768.98064"	"1768.97950"	"0.64"	"0.00057"	"11/110"	"11"	"110"	"1134201.0668335"	"HCD"	"MS2"	"0"	"58.4"	"100.000"	"64.3555"	"20679"	"20679"	"20649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.6"	""	"113.7"	""	"73.8"	""	"94.8"	""	"93.1"	"85.4"	""	"988"	"41"	"36.000"	"29.000"	"0.00432241984962354"	"17"	"0"	"5.954E-07"	"1.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAYYTLIGANGQR"	"[R].lVAYYTLIGANGqR.[E]"	"N-Term(TMT6plex); Q13(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0244"	"2"	"2"	"2"	"884.99396"	"1768.98064"	"1768.97950"	"0.64"	"0.00057"	"11/110"	"11"	"110"	"1134201.0668335"	"HCD"	"MS2"	"0"	"58.4"	"100.000"	"64.3555"	"20679"	"20679"	"20649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.6"	""	"113.7"	""	"73.8"	""	"94.8"	""	"93.1"	"85.4"	""	"988"	"40"	"36.000"	"29.000"	"0.00526898483887748"	"17"	"0"	"1.82E-06"	"1.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAPDFVFYAPR"	"[K].kAPDFVFYAPR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.34210"	"1769.01175"	"1769.01505"	"-1.86"	"-0.00110"	"10/100"	"10"	"100"	"102269460.151855"	"HCD"	"MS2"	"3.835735"	"457.4"	"11.859"	"46.3119"	"13338"	"13338"	"13320"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"651.5"	""	"612.7"	""	"622.3"	""	"800.6"	"1.5"	"815.7"	"827.9"	""	"805"	"24"	"36.000"	"29.000"	"0.149887661767464"	"14"	"0"	"0.0001489"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAPDFVFYAPR"	"[K].kAPDFVFYAPR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"885.01031"	"1769.01335"	"1769.01505"	"-0.96"	"-0.00085"	"13/100"	"13"	"100"	"689475.836486816"	"HCD"	"MS2"	"0"	"45.2"	"100.000"	"46.5967"	"13503"	"13503"	"13474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.8"	""	"62.5"	""	"54.0"	""	"85.0"	"1.0"	"76.2"	"90.5"	""	"835"	"35"	"36.000"	"29.000"	"0.0122929603211098"	"15"	"0.0001889"	"0.000653"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAPDFVFYAPR"	"[K].kAPDFVFYAPR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.34271"	"1769.01358"	"1769.01505"	"-0.83"	"-0.00049"	"9/100"	"9"	"100"	"79048379.8183594"	"HCD"	"MS2"	"2.759967"	"796.0"	"26.555"	"46.5670"	"13491"	"13491"	"13474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1156.3"	""	"1068.8"	""	"1070.1"	""	"1322.5"	"9.3"	"1395.8"	"1517.4"	""	"829"	"24"	"36.000"	"29.000"	"0.176410542243936"	"14"	"0"	"0.0001111"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAPDFVFYAPR"	"[K].kAPDFVFYAPR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"885.01056"	"1769.01384"	"1769.01505"	"-0.68"	"-0.00060"	"10/100"	"10"	"100"	"392803.537475586"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"46.4126"	"13380"	"13380"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.7"	""	"31.9"	""	"39.9"	""	"40.3"	""	"51.6"	"57.5"	""	"831"	"26"	"36.000"	"29.000"	"0.108785503991499"	"17"	"0.003286"	"0.06879"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTAMDVVYALK"	"[K].tVTAMDVVYALk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"590.34692"	"1769.02622"	"1769.02831"	"-1.18"	"-0.00070"	"13/98"	"13"	"98"	"3947417.77362061"	"HCD"	"MS2"	"5.476038"	"98.8"	"100.000"	"72.7420"	"24146"	"24146"	"24127"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.5"	""	"77.3"	""	"72.1"	""	"133.1"	""	"249.6"	"343.5"	""	"735"	"41"	"35.000"	"28.000"	"0.00291244238951574"	"17"	"0"	"6.484E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTAMDVVYALK"	"[K].tVTAMDVVYALk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"885.01685"	"1769.02641"	"1769.02831"	"-1.07"	"-0.00095"	"16/98"	"16"	"98"	"853275.869628906"	"HCD"	"MS2"	"36.52941"	"64.4"	"100.000"	"72.6755"	"24119"	"24119"	"24095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.1"	""	"40.7"	""	"55.2"	""	"90.7"	""	"177.5"	"215.8"	""	"735"	"46"	"35.000"	"28.000"	"0.00101685105468873"	"15"	"0"	"2.559E-05"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTAMDVVYALK"	"[K].tVTAMDVVYALk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"590.34808"	"1769.02970"	"1769.02831"	"0.78"	"0.00046"	"9/98"	"9"	"98"	"3617154.49481201"	"HCD"	"MS2"	"12.22954"	"103.9"	"100.000"	"72.7233"	"24087"	"24087"	"24065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.6"	""	"83.8"	""	"78.1"	""	"153.5"	""	"271.1"	"328.0"	""	"696"	"45"	"35.000"	"28.000"	"0.00122343033303848"	"26"	"0"	"2.357E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTAMDVVYALK"	"[K].tVTAMDVVYALk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"885.01880"	"1769.03032"	"1769.02831"	"1.13"	"0.00100"	"11/98"	"11"	"98"	"898386.128540039"	"HCD"	"MS2"	"36.94315"	"65.8"	"100.000"	"72.7256"	"24088"	"24088"	"24065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.1"	""	"51.1"	""	"49.5"	""	"91.8"	"1.7"	"164.1"	"227.2"	""	"695"	"69"	"35.000"	"28.000"	"4.75285766894557E-06"	"22"	"0"	"2.723E-06"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVLPLQDHTIK"	"[R].fVLPLQDHTIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.36218"	"1769.07199"	"1769.07256"	"-0.32"	"-0.00019"	"12/94"	"12"	"94"	"5727547.31573486"	"HCD"	"MS2"	"18.79659"	"215.2"	"100.000"	"51.8454"	"15642"	"15642"	"15622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"263.2"	""	"253.7"	""	"274.2"	""	"380.3"	""	"437.3"	"435.1"	""	"432"	"41"	"33.000"	"26.000"	"0.00192067441457317"	"16"	"0"	"0.0001058"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVLPLQDHTIK"	"[R].fVLPLQDHTIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"590.36255"	"1769.07309"	"1769.07256"	"0.30"	"0.00018"	"12/94"	"12"	"94"	"5669800.82617188"	"HCD"	"MS2"	"14.06258"	"212.9"	"100.000"	"51.6610"	"15517"	"15517"	"15490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.6"	""	"249.7"	""	"263.4"	""	"365.7"	""	"453.1"	"427.2"	""	"419"	"36"	"33.000"	"26.000"	"0.00502555496534583"	"16"	"0"	"8.917E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPNIITLADIVK"	"[R].gGPNIITLADIVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.36853"	"1769.09104"	"1769.09369"	"-1.50"	"-0.00088"	"12/120"	"12"	"120"	"1264239.51171875"	"HCD"	"MS2"	"10.84868"	"40.3"	"100.000"	"73.1433"	"24310"	"24310"	"24287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.8"	""	"41.0"	""	"48.8"	""	"71.1"	""	"90.8"	"92.9"	""	"315"	"40"	"31.000"	"24.000"	"0.00144637383946164"	"15"	"0"	"4.767E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPNIITLADIVK"	"[R].gGPNIITLADIVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.36853"	"1769.09104"	"1769.09369"	"-1.50"	"-0.00088"	"12/120"	"12"	"120"	"1413443.13745117"	"HCD"	"MS2"	"5.98358"	"43.6"	"100.000"	"73.1546"	"24263"	"24263"	"24241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.1"	""	"43.0"	""	"53.3"	""	"77.7"	"0.4"	"97.6"	"98.1"	""	"315"	"35"	"31.000"	"24.000"	"0.0048672153062089"	"15"	"0.0001308"	"0.0002756"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPNIITLADIVK"	"[R].gGPNIITLADIVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"885.05029"	"1769.09331"	"1769.09369"	"-0.22"	"-0.00019"	"15/120"	"15"	"120"	"435841.24005127"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"73.1018"	"24293"	"24293"	"24271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.4"	""	"27.2"	""	"31.4"	""	"53.4"	"1.4"	"51.4"	"51.4"	""	"292"	"33"	"31.000"	"24.000"	"0.00794973873149935"	"15"	"0.0004166"	"0.002482"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVPAVPETLK"	"[K].kVPAVPETLk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"1"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"590.38586"	"1769.14304"	"1769.15037"	"-4.14"	"-0.00244"	"9/92"	"9"	"92"	"24778312.8157959"	"HCD"	"MS2"	"26.24037"	"504.1"	"48.497"	"38.5206"	"10170"	"10170"	"10151"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"606.1"	""	"629.7"	""	"672.4"	""	"836.0"	""	"1071.8"	"978.1"	""	"115"	"16"	"27.000"	"20.000"	"0.132332904500989"	"17"	"0.0001889"	"0.001098"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVPAVPETLK"	"[K].kVPAVPETLk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"1"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"590.38690"	"1769.14615"	"1769.15037"	"-2.38"	"-0.00141"	"10/92"	"10"	"92"	"32929780.2407227"	"HCD"	"MS2"	"7.493503"	"336.0"	"27.310"	"38.7029"	"10288"	"10288"	"10270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"378.6"	""	"422.2"	""	"464.1"	""	"579.8"	"3.3"	"695.5"	"646.3"	""	"108"	"33"	"27.000"	"20.000"	"0.00266927770972891"	""	"0.0001308"	"0.0002995"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANDTTFGLAAGVFTR"	"[R].aNDTTFGLAAGVFTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"885.47095"	"1769.93462"	"1769.93836"	"-2.12"	"-0.00187"	"13/160"	"13"	"160"	"926803.903869629"	"HCD"	"MS2"	"0"	"58.2"	"100.000"	"60.2116"	"19040"	"19040"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.2"	""	"81.8"	""	"84.1"	""	"95.4"	"2.9"	"98.8"	"105.9"	""	"1052"	"94"	"37.000"	"30.000"	"2.07962842155836E-08"	"30"	"0"	"8.555E-08"	"1.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANDTTFGLAAGVFTR"	"[R].aNDTTFGLAAGVFTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"885.47290"	"1769.93852"	"1769.93836"	"0.09"	"0.00008"	"10/160"	"10"	"160"	"844214.538330078"	"HCD"	"MS2"	"0"	"55.4"	"100.000"	"60.0784"	"18932"	"18932"	"18905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.1"	""	"70.4"	""	"80.7"	""	"88.1"	"1.9"	"93.9"	"99.5"	""	"1032"	"78"	"37.000"	"30.000"	"8.42654805113475E-07"	"24"	"0"	"7.88E-07"	"1.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANDTTFGLAAGVFTR"	"[R].aNDTTFGLAAGVFTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.65112"	"1769.93882"	"1769.93836"	"0.26"	"0.00015"	"17/160"	"17"	"160"	"3977875.06982422"	"HCD"	"MS2"	"40.24107"	"104.2"	"100.000"	"60.0738"	"18930"	"18930"	"18905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.5"	""	"148.8"	""	"147.1"	""	"164.8"	"2.2"	"212.9"	"187.2"	""	"1029"	"37"	"37.000"	"30.000"	"0.011386372280921"	"15"	"0"	"4.854E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDWHVANTDK"	"[R].iLDWHVANTDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"590.66968"	"1769.99448"	"1769.99504"	"-0.32"	"-0.00019"	"10/100"	"10"	"100"	"27154468.5174561"	"HCD"	"MS2"	"72.26317"	"366.3"	"42.725"	"46.6312"	"13469"	"13469"	"13448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"557.5"	""	"510.5"	""	"525.3"	""	"579.1"	"5.1"	"622.4"	"666.7"	""	"909"	"10"	"36.000"	"29.000"	"4.17382165101787"	"19"	"0.0001859"	"0.000349"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLYEALEYAK"	"[K].vLLYEALEYAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q4G069"	"Regulator of microtubule dynamics protein 1 OS=Rattus norvegicus OX=10116 GN=Rmdn1 PE=2 SV=1"	"Q4G069"	"Regulator of microtubule dynamics protein 1 OS=Rattus norvegicus OX=10116 GN=Rmdn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"885.52698"	"1770.04668"	"1770.04534"	"0.75"	"0.00067"	"8/86"	"8"	"86"	"134273.510925293"	"HCD"	"MS2"	"100"	"13.8"	"100.000"	"79.9353"	"27019"	"27019"	"26993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.2"	""	"19.0"	""	"22.4"	""	"20.8"	""	"22.8"	"31.6"	""	"637"	"25"	"35.000"	"28.000"	"0.0957435302387091"	"19"	"0.0003839"	"0.002073"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQSNGWGVMVSHR"	"[K].lAQSNGWGVMVSHR.[S]"	"N-Term(TMT6plex)"	"2"	"2"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3;Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3; Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.98077"	"1770.92777"	"1770.92709"	"0.38"	"0.00023"	"14/142"	"14"	"142"	"11091710.5315552"	"HCD"	"MS2"	"16.63697"	"534.5"	"100.000"	"39.4213"	"10540"	"10540"	"10518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"843.7"	""	"826.4"	""	"793.2"	""	"778.5"	""	"898.2"	"922.9"	""	"1073"	"9"	"37.000"	"30.000"	"6.49485898649833"	"13"	"0.000523"	"0.002936"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYGIPFIETSAK"	"[RK].sYGIPFIETSAk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644; Q04970"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3; GTPase NRas OS=Rattus norvegicus OX=10116 GN=Nras PE=1 SV=1"	"0"	"2"	"2"	"0.8971"	"0.0000"	"1"	"1"	"1"	"886.00439"	"1771.00151"	"1771.00421"	"-1.52"	"-0.00135"	"11/106"	"11"	"106"	"1406037.81506348"	"HCD"	"MS2"	"0"	"107.4"	"100.000"	"59.8205"	"18880"	"18880"	"18853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.2"	""	"166.4"	""	"148.0"	""	"160.0"	"2.5"	"207.8"	"194.3"	""	"916"	"68"	"36.000"	"29.000"	"7.67123837220107E-06"	"24"	"0"	"3.687E-06"	"1.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYGIPFIETSAK"	"[RK].sYGIPFIETSAk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644; Q04970"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3; GTPase NRas OS=Rattus norvegicus OX=10116 GN=Nras PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.00537"	"1771.00347"	"1771.00421"	"-0.42"	"-0.00037"	"16/106"	"16"	"106"	"1554789.06988525"	"HCD"	"MS2"	"16.52049"	"106.9"	"100.000"	"60.1128"	"18999"	"18999"	"18979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.4"	""	"148.4"	""	"151.0"	""	"166.3"	"0.1"	"201.7"	"201.5"	""	"914"	"31"	"36.000"	"29.000"	"0.035967992589066"	"14"	"0"	"3.525E-05"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYGIPFIETSAK"	"[RK].sYGIPFIETSAk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644; Q04970"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3; GTPase NRas OS=Rattus norvegicus OX=10116 GN=Nras PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"886.00549"	"1771.00371"	"1771.00421"	"-0.28"	"-0.00025"	"10/106"	"10"	"106"	"1243493.27764893"	"HCD"	"MS2"	"45.41321"	"91.4"	"100.000"	"60.0254"	"18910"	"18910"	"18889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.7"	""	"118.8"	""	"136.5"	""	"139.1"	""	"177.2"	"162.5"	""	"918"	"18"	"36.000"	"29.000"	"0.740990577583356"	"18"	"0.0001308"	"0.000224"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYGIPFIETSAK"	"[RK].sYGIPFIETSAk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644; Q04970"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3; GTPase NRas OS=Rattus norvegicus OX=10116 GN=Nras PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"886.00574"	"1771.00420"	"1771.00421"	"-0.01"	"0.00000"	"15/106"	"15"	"106"	"1669069.93536377"	"HCD"	"MS2"	"0"	"120.3"	"100.000"	"59.6872"	"18772"	"18772"	"18745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.5"	""	"175.7"	""	"162.5"	""	"195.9"	""	"229.8"	"221.2"	""	"911"	"34"	"36.000"	"29.000"	"0.0163865822163441"	"22"	"0"	"0.000129"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYGIPFIETSAK"	"[RK].sYGIPFIETSAk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644; Q04970"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3; GTPase NRas OS=Rattus norvegicus OX=10116 GN=Nras PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"591.00635"	"1771.00449"	"1771.00421"	"0.16"	"0.00009"	"13/106"	"13"	"106"	"6381597.6473999"	"HCD"	"MS2"	"29.23977"	"160.3"	"100.000"	"60.1079"	"18997"	"18997"	"18979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.8"	""	"243.6"	""	"235.3"	""	"221.2"	""	"326.2"	"298.8"	""	"914"	"42"	"36.000"	"29.000"	"0.00293032776499419"	"19"	"0.0001308"	"0.0002156"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYGIPFIETSAK"	"[RK].sYGIPFIETSAk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644; Q04970"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3; GTPase NRas OS=Rattus norvegicus OX=10116 GN=Nras PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"591.00653"	"1771.00504"	"1771.00421"	"0.47"	"0.00028"	"15/106"	"15"	"106"	"7240418.85400391"	"HCD"	"MS2"	"18.32774"	"194.2"	"100.000"	"59.9009"	"18859"	"18859"	"18841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.5"	""	"272.8"	""	"304.1"	""	"275.4"	"0.0"	"368.0"	"362.9"	""	"912"	"48"	"36.000"	"29.000"	"0.000665219302685558"	"19"	"0"	"7.035E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLSSPSLAFTPPIR"	"[R].gVLSSPSLAFTPPIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FY1"	"Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1"	"Q68FY1"	"Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.01837"	"1771.02947"	"1771.03154"	"-1.17"	"-0.00103"	"12/126"	"12"	"126"	"339402.892456055"	"HCD"	"MS2"	"0"	"29.4"	"100.000"	"63.2292"	"20272"	"20272"	"20243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.9"	""	"34.5"	""	"39.6"	""	"51.0"	"1.1"	"50.9"	"56.0"	""	"787"	"12"	"35.000"	"28.000"	"2.46572555748564"	"13"	"0.0003839"	"0.002088"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRDWNVDLIPK"	"[R].gRDWNVDLIPk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"1"	"3"	"3"	"0.1000"	"0.0000"	"1"	"1"	"1"	"591.01489"	"1771.03012"	"1771.02667"	"1.95"	"0.00115"	"12/106"	"12"	"106"	"39620028.1624756"	"HCD"	"MS2"	"38.42469"	"446.0"	"34.802"	"46.6980"	"13497"	"13497"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"794.3"	""	"735.0"	""	"724.3"	""	"598.4"	"0.1"	"669.4"	"688.7"	""	"788"	"10"	"35.000"	"28.000"	"4.29038456773373"	"19"	"0.0004166"	"0.002475"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GRDWNVDLIPK"	"[R].gRDWNVDLIPk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"591.01550"	"1771.03196"	"1771.02667"	"2.98"	"0.00176"	"13/106"	"13"	"106"	"37488922.1972656"	"HCD"	"MS2"	"42.58721"	"482.4"	"41.069"	"46.9618"	"13652"	"13652"	"13634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"872.0"	""	"782.3"	""	"785.4"	""	"660.9"	"7.1"	"707.4"	"737.9"	""	"768"	"11"	"35.000"	"28.000"	"2.80111683937755"	"24"	"0.0001889"	"0.0005604"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTTIFEVLPQK"	"[K].hTTIFEVLPQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.5745"	"0.0000"	"1"	"1"	"1"	"591.01990"	"1771.04514"	"1771.05183"	"-3.78"	"-0.00223"	"9/90"	"9"	"90"	"36965313.3948975"	"HCD"	"MS2"	"6.607538"	"278.5"	"32.881"	"46.0117"	"13215"	"13215"	"13197"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"444.5"	""	"386.9"	""	"377.9"	""	"448.0"	""	"460.2"	"519.5"	""	"657"	"47"	"35.000"	"28.000"	"0.000683180361713564"	""	"0"	"6.652E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTTIFEVLPQK"	"[K].hTTIFEVLPQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"591.02051"	"1771.04697"	"1771.05183"	"-2.74"	"-0.00162"	"7/90"	"7"	"90"	"33202230.1098633"	"HCD"	"MS2"	"1.973875"	"240.2"	"31.986"	"46.2873"	"13377"	"13377"	"13360"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"358.5"	""	"312.9"	""	"353.4"	""	"394.8"	""	"396.2"	"465.7"	""	"608"	"31"	"34.000"	"27.000"	"0.0250537986963953"	""	"0.0001308"	"0.0002884"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTTIFEVLPQK"	"[K].hTTIFEVLPQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"4"	"4"	"0.7949"	"0.0000"	"1"	"1"	"1"	"443.51743"	"1771.04787"	"1771.05183"	"-2.23"	"-0.00099"	"11/90"	"11"	"90"	"9975616.19537354"	"HCD"	"MS2"	"0"	"252.3"	"95.695"	"46.2345"	"13355"	"13355"	"13328"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"404.3"	""	"357.8"	""	"358.0"	""	"398.2"	""	"417.9"	"453.3"	""	"605"	"39"	"34.000"	"27.000"	"0.00402462461438373"	"22"	"0"	"0.0001544"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTTIFEVLPQK"	"[K].hTTIFEVLPQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"4"	"4"	"0.7429"	"0.0000"	"1"	"1"	"1"	"443.51770"	"1771.04897"	"1771.05183"	"-1.61"	"-0.00071"	"11/90"	"11"	"90"	"13818358.425293"	"HCD"	"MS2"	"5.690587"	"249.9"	"72.958"	"46.2042"	"13294"	"13294"	"13272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"384.7"	""	"339.0"	""	"368.3"	""	"390.3"	"4.6"	"438.5"	"439.9"	""	"633"	"35"	"35.000"	"28.000"	"0.0109237993499799"	"23"	"0"	"0.0001718"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTTIFEVLPQK"	"[K].hTTIFEVLPQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"4"	"4"	"0.7576"	"0.0000"	"1"	"1"	"1"	"443.51810"	"1771.05056"	"1771.05183"	"-0.72"	"-0.00032"	"9/90"	"9"	"90"	"11923934.2572632"	"HCD"	"MS2"	"4.107388"	"267.2"	"84.751"	"46.5347"	"13477"	"13477"	"13459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"387.9"	""	"354.9"	""	"383.2"	""	"441.7"	"0.3"	"441.1"	"520.2"	""	"625"	"33"	"34.000"	"27.000"	"0.0157343940246221"	"22"	"7.476E-05"	"0.000205"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTTIFEVLPQK"	"[K].hTTIFEVLPQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"4"	"4"	"0.8500"	"0.0000"	"1"	"1"	"1"	"443.51819"	"1771.05092"	"1771.05183"	"-0.51"	"-0.00023"	"11/90"	"11"	"90"	"7896179.85894775"	"HCD"	"MS2"	"54.67167"	"200.7"	"100.000"	"45.9107"	"13174"	"13174"	"13149"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"305.0"	""	"294.5"	""	"286.9"	""	"330.9"	"3.0"	"308.1"	"369.8"	""	"606"	"40"	"34.000"	"27.000"	"0.00332998769348053"	"21"	"0"	"7.845E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFLLNEDALK"	"[R].iHFLLNEDALk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"591.02197"	"1771.05136"	"1771.05183"	"-0.26"	"-0.00015"	"10/92"	"10"	"92"	"11542406.8723145"	"HCD"	"MS2"	"21.67057"	"186.4"	"59.119"	"55.9132"	"17288"	"17288"	"17269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"299.2"	""	"340.3"	""	"286.5"	""	"232.9"	"4.3"	"296.6"	"301.5"	""	"609"	"34"	"34.000"	"27.000"	"0.0122627336952102"	"20"	"7.476E-05"	"0.0002048"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTTIFEVLPQK"	"[K].hTTIFEVLPQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"886.02948"	"1771.05168"	"1771.05183"	"-0.08"	"-0.00007"	"8/90"	"8"	"90"	"616269.818237305"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"46.0759"	"13242"	"13242"	"13213"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.4"	""	"64.6"	""	"57.6"	""	"72.2"	"1.7"	"74.0"	"93.1"	""	"576"	"44"	"34.000"	"27.000"	"0.00122009174222268"	""	"0"	"9.82E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFLLNEDALK"	"[R].iHFLLNEDALk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9808"	"0.0000"	"1"	"1"	"1"	"591.02222"	"1771.05210"	"1771.05183"	"0.15"	"0.00009"	"8/92"	"8"	"92"	"28970534.2932739"	"HCD"	"MS2"	"6.812099"	"638.5"	"100.000"	"55.3528"	"17005"	"17005"	"16987"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1095.9"	""	"1167.0"	""	"777.9"	""	"1090.7"	"4.6"	"1002.7"	"892.0"	""	"576"	"52"	"34.000"	"27.000"	"0.000196513543912801"	"17"	"0"	"2.177E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTTIFEVLPQK"	"[K].hTTIFEVLPQk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"886.02972"	"1771.05217"	"1771.05183"	"0.19"	"0.00017"	"7/90"	"7"	"90"	"621923.580871582"	"HCD"	"MS2"	"0"	"47.1"	"100.000"	"46.3653"	"13408"	"13408"	"13388"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.9"	""	"57.1"	""	"66.3"	""	"76.9"	"0.5"	"77.3"	"85.5"	""	"576"	"52"	"34.000"	"27.000"	"0.00016534554111571"	"21"	"0"	"1.659E-05"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFLLNEDALK"	"[R].iHFLLNEDALk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"591.02228"	"1771.05228"	"1771.05183"	"0.26"	"0.00015"	"8/92"	"8"	"92"	"48493526.7672119"	"HCD"	"MS2"	"3.774219"	"464.6"	"44.964"	"55.5586"	"17143"	"17143"	"17125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"809.3"	""	"840.6"	""	"538.9"	""	"824.1"	""	"717.0"	"659.3"	""	"576"	"52"	"34.000"	"27.000"	"0.000193817277009884"	"17"	"0"	"3.073E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFLLNEDALK"	"[R].iHFLLNEDALk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.03040"	"1771.05351"	"1771.05183"	"0.95"	"0.00084"	"18/92"	"18"	"92"	"1282679.8503418"	"HCD"	"MS2"	"0"	"93.0"	"100.000"	"55.6071"	"17163"	"17163"	"17141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.0"	""	"185.5"	""	"97.9"	""	"162.4"	""	"146.7"	"138.3"	""	"559"	"62"	"34.000"	"27.000"	"1.57536724803354E-05"	"17"	"0"	"6.997E-06"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFLLNEDALK"	"[R].iHFLLNEDALk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.02271"	"1771.05356"	"1771.05183"	"0.98"	"0.00058"	"12/92"	"12"	"92"	"16498760.3773804"	"HCD"	"MS2"	"4.790778"	"300.9"	"69.013"	"55.6612"	"17132"	"17132"	"17115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"504.3"	""	"544.3"	""	"425.4"	""	"442.5"	"4.5"	"459.1"	"461.8"	""	"559"	"44"	"34.000"	"27.000"	"0.00122006175111126"	"15"	"0"	"2.597E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFLLNEDALK"	"[R].iHFLLNEDALk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9483"	"0.0000"	"1"	"1"	"1"	"886.03052"	"1771.05376"	"1771.05183"	"1.09"	"0.00097"	"10/92"	"10"	"92"	"1256618.63354492"	"HCD"	"MS2"	"0"	"95.7"	"100.000"	"55.4081"	"17028"	"17028"	"17003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.8"	""	"173.0"	""	"100.0"	""	"183.3"	"1.0"	"144.8"	"134.0"	""	"577"	"58"	"34.000"	"27.000"	"4.58295736970459E-05"	"19"	"0"	"9.396E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAINGGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"591.04108"	"1771.10868"	"1771.10934"	"-0.38"	"-0.00022"	"13/106"	"13"	"106"	"2111510.66699219"	"HCD"	"MS2"	"8.512219"	"49.2"	"100.000"	"84.7807"	"29045"	"29045"	"29026"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.3"	""	"75.8"	""	"101.1"	""	"62.6"	""	"64.5"	"86.5"	""	"257"	"56"	"31.000"	"24.000"	"3.55552001435379E-05"	"24"	"0"	"0.0001501"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAINGGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"886.05811"	"1771.10893"	"1771.10934"	"-0.23"	"-0.00020"	"17/106"	"17"	"106"	"192030.451965332"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"84.7229"	"29022"	"29022"	"29000"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.4"	""	"23.1"	""	"22.9"	""	"16.1"	""	"21.1"	"19.1"	""	"257"	"74"	"31.000"	"24.000"	"5.48154681660046E-07"	"23"	"0"	"7.628E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAINGGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"886.05847"	"1771.10967"	"1771.10934"	"0.18"	"0.00016"	"15/106"	"15"	"106"	"199132.791748047"	"HCD"	"MS2"	"8.429336"	"13.0"	"100.000"	"85.0253"	"29145"	"29145"	"29122"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.9"	""	"23.7"	""	"26.8"	""	"15.4"	""	"14.7"	"21.3"	""	"255"	"52"	"31.000"	"24.000"	"7.52506377219102E-05"	"17"	"0"	"0.0001706"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAINGGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9104"	"0.0000"	"1"	"1"	"1"	"886.05847"	"1771.10967"	"1771.10934"	"0.18"	"0.00016"	"11/106"	"11"	"106"	"296788.101928711"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"84.7098"	"28966"	"28966"	"28939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.6"	""	"35.4"	""	"44.6"	""	"24.9"	""	"26.9"	"38.0"	""	"255"	"67"	"31.000"	"24.000"	"2.59722864907479E-06"	"23"	"0"	"1.699E-06"	"1.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAINGGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8491"	"0.0000"	"1"	"1"	"1"	"591.04144"	"1771.10978"	"1771.10934"	"0.24"	"0.00014"	"13/106"	"13"	"106"	"637222.130737305"	"HCD"	"MS2"	"4.545082"	"20.0"	"100.000"	"85.0994"	"29175"	"29175"	"29154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.6"	""	"31.9"	""	"34.6"	""	"29.0"	""	"25.6"	"39.9"	""	"249"	"53"	"30.000"	"23.000"	"6.62474782787159E-05"	""	"0"	"8.015E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAINGGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"591.04156"	"1771.11014"	"1771.10934"	"0.45"	"0.00027"	"13/106"	"13"	"106"	"2001888.17431641"	"HCD"	"MS2"	"9.627745"	"49.0"	"100.000"	"84.7239"	"28972"	"28972"	"28955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.6"	""	"79.7"	""	"91.4"	""	"62.4"	"2.7"	"64.8"	"90.2"	""	"249"	"54"	"30.000"	"23.000"	"5.34772851322285E-05"	""	"0"	"0.0001192"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAINGGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"886.05878"	"1771.11028"	"1771.10934"	"0.53"	"0.00047"	"13/106"	"13"	"106"	"142148.774414063"	"HCD"	"MS2"	"19.07418"	"9.4"	"100.000"	"85.0147"	"29090"	"29090"	"29067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.4"	""	"13.5"	""	"17.9"	""	"11.6"	""	"10.8"	"18.2"	""	"263"	"44"	"31.000"	"24.000"	"0.000525927345935844"	"19"	"0.0001308"	"0.0002997"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAINGGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"591.04224"	"1771.11216"	"1771.10934"	"1.59"	"0.00094"	"13/106"	"13"	"106"	"425188.243164063"	"HCD"	"MS2"	"4.791487"	"15.7"	"100.000"	"85.0866"	"29119"	"29119"	"29099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.6"	""	"25.6"	""	"24.9"	""	"19.0"	""	"24.2"	"33.8"	""	"261"	"49"	"31.000"	"24.000"	"0.000167729909122642"	"21"	"0"	"4.832E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSmVTLGcLVk.[G]"	"N-Term(TMT6plex); M4(Oxidation); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9104"	"0.0000"	"1"	"1"	"1"	"886.47937"	"1771.95146"	"1771.95206"	"-0.33"	"-0.00030"	"11/118"	"11"	"118"	"1144447.20440674"	"HCD"	"MS2"	"0"	"93.9"	"100.000"	"56.2650"	"17432"	"17432"	"17413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.9"	""	"145.3"	""	"149.8"	""	"195.9"	"2.6"	"151.4"	"137.0"	""	"992"	"67"	"36.000"	"29.000"	"1.04829056375898E-05"	"22"	"0"	"8.197E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSmVTLGcLVk.[G]"	"N-Term(TMT6plex); M4(Oxidation); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"886.47937"	"1771.95146"	"1771.95206"	"-0.33"	"-0.00030"	"11/118"	"11"	"118"	"1149780.6328125"	"HCD"	"MS2"	"0"	"87.7"	"100.000"	"56.0318"	"17283"	"17283"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.4"	""	"127.1"	""	"127.6"	""	"185.7"	"2.3"	"137.1"	"138.0"	""	"992"	"66"	"36.000"	"29.000"	"1.20637318850061E-05"	"23"	"0"	"3.142E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSmVTLGcLVk.[G]"	"N-Term(TMT6plex); M4(Oxidation); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"591.32214"	"1771.95188"	"1771.95206"	"-0.10"	"-0.00006"	"14/118"	"14"	"118"	"6717345.16851807"	"HCD"	"MS2"	"24.24471"	"192.3"	"100.000"	"56.2583"	"17430"	"17430"	"17413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"243.4"	""	"280.3"	""	"306.7"	""	"358.5"	"0.9"	"329.2"	"300.4"	""	"992"	"41"	"36.000"	"29.000"	"0.00368537492396764"	"16"	"0"	"1.782E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNSMVTLGCLVK"	"[K].sNSmVTLGcLVk.[G]"	"N-Term(TMT6plex); M4(Oxidation); C9(Methylthio); K12(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"591.32227"	"1771.95224"	"1771.95206"	"0.11"	"0.00006"	"14/118"	"14"	"118"	"5732426.39709473"	"HCD"	"MS2"	"44.60996"	"176.2"	"100.000"	"55.9695"	"17258"	"17258"	"17227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"211.7"	""	"268.4"	""	"265.3"	""	"325.8"	""	"287.0"	"309.8"	""	"989"	"44"	"36.000"	"29.000"	"0.00198685555964801"	"21"	"0"	"3.206E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKGVDEVTIVNILTNR"	"[K].TKGVDEVTIVNILTNR.[S]"	""	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.1728"	"0.0000"	"1"	"1"	"1"	"886.50830"	"1772.00932"	"1771.99124"	"10.21"	"0.00904"	"24/174"	"24"	"174"	"831100.950683594"	"HCD"	"MS2"	"7.613524"	"40.7"	"100.000"	"73.6761"	"24528"	"24528"	"24511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.8"	""	"43.9"	""	"44.0"	""	"74.6"	"1.6"	"78.2"	"85.8"	"NoQuanLabels"	"888"	"81"	"36.000"	"29.000"	"3.3448987029777E-07"	"29"	"0"	"6.428E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKGVDEVTIVNILTNR"	"[K].TKGVDEVTIVNILTNR.[S]"	""	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.1864"	"0.0000"	"1"	"1"	"1"	"591.34167"	"1772.01047"	"1771.99124"	"10.85"	"0.00641"	"19/174"	"19"	"174"	"4113855.23370361"	"HCD"	"MS2"	"10.93616"	"25.7"	"100.000"	"73.3047"	"24376"	"24376"	"24351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.7"	""	"26.8"	""	"30.9"	""	"46.1"	""	"52.2"	"54.9"	"NoQuanLabels"	"884"	"59"	"36.000"	"29.000"	"5.00520960550116E-05"	"27"	"0.0003839"	"0.001758"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKGVDEVTIVNILTNR"	"[K].TKGVDEVTIVNILTNR.[S]"	""	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.1224"	"0.0000"	"1"	"1"	"1"	"591.34180"	"1772.01084"	"1771.99124"	"11.06"	"0.00653"	"20/174"	"20"	"174"	"8147824.34887695"	"HCD"	"MS2"	"6.328597"	"37.1"	"100.000"	"73.5977"	"24496"	"24496"	"24479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.2"	""	"44.6"	""	"44.6"	""	"62.9"	""	"83.2"	"78.9"	"NoQuanLabels"	"856"	"49"	"36.000"	"29.000"	"0.000582698324095428"	"22"	"0.0001889"	"0.0005638"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKGVDEVTIVNILTNR"	"[K].TKGVDEVTIVNILTNR.[S]"	""	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.1461"	"0.0000"	"1"	"1"	"1"	"886.50934"	"1772.01140"	"1771.99124"	"11.38"	"0.01008"	"13/174"	"13"	"174"	"2454971.55322266"	"HCD"	"MS2"	"20.46716"	"114.4"	"100.000"	"73.3692"	"24402"	"24402"	"24383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.1"	""	"115.9"	""	"133.6"	""	"209.6"	""	"236.7"	"247.6"	"NoQuanLabels"	"856"	"89"	"36.000"	"29.000"	"5.55192727981133E-08"	""	"0"	"6.741E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKGVDEVTIVNILTNR"	"[K].TKGVDEVTIVNILTNR.[S]"	""	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.1064"	"0.0000"	"1"	"1"	"1"	"591.34210"	"1772.01175"	"1771.99124"	"11.58"	"0.00684"	"19/174"	"19"	"174"	"8209816.38989258"	"HCD"	"MS2"	"6.913052"	"34.8"	"100.000"	"73.6115"	"24450"	"24450"	"24433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.7"	""	"38.4"	""	"46.2"	""	"56.0"	""	"71.3"	"76.3"	"NoQuanLabels"	"874"	"47"	"36.000"	"29.000"	"0.000875954275958576"	"22"	"0.0003839"	"0.001717"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKGVDEVTIVNILTNR"	"[K].TKGVDEVTIVNILTNR.[S]"	""	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.0938"	"0.0000"	"1"	"1"	"1"	"591.34216"	"1772.01194"	"1771.99124"	"11.68"	"0.00690"	"16/174"	"16"	"174"	"4389281.14367676"	"HCD"	"MS2"	"20.65025"	"27.1"	"100.000"	"73.3207"	"24331"	"24331"	"24305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.0"	""	"31.1"	""	"36.0"	""	"47.1"	""	"51.7"	"58.2"	"NoQuanLabels"	"872"	"64"	"36.000"	"29.000"	"1.60135083017165E-05"	"28"	"0.0001889"	"0.0006264"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKGVDEVTIVNILTNR"	"[K].TKGVDEVTIVNILTNR.[S]"	""	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.1609"	"0.0000"	"1"	"1"	"1"	"886.50989"	"1772.01250"	"1771.99124"	"12.00"	"0.01063"	"12/174"	"12"	"174"	"2916844.70269775"	"HCD"	"MS2"	"15.44634"	"75.9"	"100.000"	"73.4197"	"24371"	"24371"	"24353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.9"	""	"86.3"	""	"88.6"	""	"142.9"	"1.2"	"147.7"	"152.8"	"NoQuanLabels"	"894"	"87"	"36.000"	"29.000"	"9.18983096404911E-08"	""	"0"	"9.157E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFFQALGITTK"	"[K].tSFFQALGITTk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"591.34930"	"1772.03336"	"1772.03584"	"-1.40"	"-0.00083"	"10/122"	"10"	"122"	"3006557.91998291"	"HCD"	"MS2"	"16.94401"	"85.5"	"100.000"	"72.2160"	"23880"	"23880"	"23857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.3"	""	"122.1"	""	"125.0"	""	"156.3"	""	"148.6"	"160.6"	""	"735"	"38"	"35.000"	"28.000"	"0.00548601945520282"	"21"	"0"	"8.198E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFFQALGITTK"	"[K].tSFFQALGITTk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"886.52118"	"1772.03508"	"1772.03584"	"-0.43"	"-0.00038"	"18/122"	"18"	"122"	"443134.776977539"	"HCD"	"MS2"	"9.403574"	"37.1"	"100.000"	"72.2030"	"23926"	"23926"	"23903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.1"	""	"45.9"	""	"60.6"	""	"60.2"	""	"70.9"	"71.3"	""	"714"	"60"	"35.000"	"28.000"	"3.86071920613364E-05"	"21"	"0"	"4.277E-06"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFFQALGITTK"	"[K].tSFFQALGITTk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"591.34991"	"1772.03519"	"1772.03584"	"-0.37"	"-0.00022"	"14/122"	"14"	"122"	"2342810.2802124"	"HCD"	"MS2"	"14.09383"	"72.7"	"100.000"	"72.1661"	"23911"	"23911"	"23887"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.7"	""	"99.7"	""	"115.9"	""	"125.1"	"0.1"	"132.7"	"128.3"	""	"714"	"36"	"35.000"	"28.000"	"0.00819725067376113"	"15"	"0"	"7.614E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFFQALGITTK"	"[K].tSFFQALGITTk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.52136"	"1772.03545"	"1772.03584"	"-0.22"	"-0.00020"	"13/122"	"13"	"122"	"424162.118835449"	"HCD"	"MS2"	"0"	"37.2"	"100.000"	"72.1905"	"23870"	"23870"	"23841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.8"	""	"43.1"	""	"61.9"	""	"67.0"	""	"73.0"	"71.8"	""	"714"	"49"	"35.000"	"28.000"	"0.000418473745500683"	"16"	"0"	"4.915E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEVNEAELLR"	"[K].kLEVNEAELLR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"591.35950"	"1772.06394"	"1772.06821"	"-2.41"	"-0.00142"	"7/110"	"7"	"110"	"5081058.76965332"	"HCD"	"MS2"	"0"	"299.8"	"100.000"	"41.9234"	"11561"	"11561"	"11544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.3"	""	"348.5"	""	"365.3"	""	"532.0"	"2.5"	"605.5"	"619.9"	""	"484"	"21"	"33.000"	"26.000"	"0.179397078394822"	"19"	"0"	"2.503E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEVNEAELLR"	"[K].kLEVNEAELLR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"591.35956"	"1772.06412"	"1772.06821"	"-2.30"	"-0.00136"	"9/110"	"9"	"110"	"5139011.74328613"	"HCD"	"MS2"	"49.03399"	"294.1"	"100.000"	"42.1824"	"11711"	"11711"	"11696"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.6"	""	"363.6"	""	"355.0"	""	"519.6"	"3.8"	"579.5"	"580.2"	""	"488"	"19"	"33.000"	"26.000"	"0.289327574552787"	"15"	"0"	"3.837E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWITFLRPELVR"	"[K].iWITFLRPELVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"591.36401"	"1772.07749"	"1772.07843"	"-0.53"	"-0.00031"	"10/108"	"10"	"108"	"1258478.31066895"	"HCD"	"MS2"	"10.65601"	"38.7"	"100.000"	"76.0600"	"25496"	"25496"	"25471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.0"	""	"69.7"	""	"83.1"	""	"53.8"	""	"52.8"	"53.5"	""	"430"	"13"	"33.000"	"26.000"	"1.19244528285951"	"17"	"0.0001308"	"0.0002898"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWITFLRPELVR"	"[K].iWITFLRPELVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"591.36493"	"1772.08023"	"1772.07843"	"1.02"	"0.00060"	"11/108"	"11"	"108"	"1507822.43731689"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"76.1403"	"25477"	"25477"	"25457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.2"	""	"93.5"	""	"87.8"	""	"67.8"	""	"48.3"	"51.3"	""	"408"	"24"	"33.000"	"26.000"	"0.0745813374890775"	"16"	"0"	"9.089E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.36841"	"1772.09067"	"1772.09336"	"-1.52"	"-0.00090"	"12/106"	"12"	"106"	"679709.114501953"	"HCD"	"MS2"	"16.27638"	"23.8"	"100.000"	"83.2859"	"28385"	"28385"	"28366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.1"	""	"38.1"	""	"36.2"	""	"32.1"	"1.2"	"36.7"	"42.7"	""	"368"	"43"	"32.000"	"25.000"	"0.0008847444011475"	"15"	"0"	"3.703E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.36847"	"1772.09085"	"1772.09336"	"-1.41"	"-0.00083"	"8/106"	"8"	"106"	"342021.032897949"	"HCD"	"MS2"	"28.48502"	"10.0"	"100.000"	"89.4388"	"30860"	"30860"	"30858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.2"	""	"11.8"	""	"18.5"	""	"19.1"	""	"12.6"	"18.8"	""	"365"	"48"	"32.000"	"25.000"	"0.000321560628470122"	"15"	"0"	"8.256E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.54907"	"1772.09087"	"1772.09336"	"-1.40"	"-0.00124"	"15/106"	"15"	"106"	"305241.874755859"	"HCD"	"MS2"	"13.31479"	"20.1"	"100.000"	"80.3255"	"27178"	"27178"	"27153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.2"	""	"34.9"	""	"29.2"	""	"27.4"	""	"30.2"	"43.1"	""	"365"	"48"	"32.000"	"25.000"	"0.000305677074874825"	"15"	"0"	"8.976E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.54913"	"1772.09099"	"1772.09336"	"-1.34"	"-0.00118"	"18/106"	"18"	"106"	"296285.491271973"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"80.3155"	"27225"	"27225"	"27199"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.0"	""	"34.2"	""	"35.3"	""	"22.8"	"1.3"	"30.4"	"29.9"	""	"365"	"70"	"32.000"	"25.000"	"1.92425608591405E-06"	"17"	"0"	"2.544E-06"	"1.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.54919"	"1772.09111"	"1772.09336"	"-1.27"	"-0.00112"	"11/106"	"11"	"106"	"117992.956176758"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"83.2308"	"28363"	"28363"	"28335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.4"	""	"12.4"	""	"14.2"	""	"10.7"	""	"15.8"	"21.3"	""	"365"	"35"	"32.000"	"25.000"	"0.00553685141115454"	"15"	"0.0001889"	"0.0004942"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"591.36859"	"1772.09122"	"1772.09336"	"-1.21"	"-0.00071"	"10/106"	"10"	"106"	"664199.47869873"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"83.2808"	"28434"	"28434"	"28413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.8"	""	"22.5"	""	"36.6"	""	"30.5"	"0.8"	"31.3"	"46.0"	""	"365"	"44"	"32.000"	"25.000"	"0.000750348241015753"	"19"	"0"	"2.586E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.54932"	"1772.09136"	"1772.09336"	"-1.13"	"-0.00100"	"10/106"	"10"	"106"	"188035.709716797"	"HCD"	"MS2"	"37.72298"	"14.1"	"100.000"	"78.9906"	"26685"	"26685"	"26655"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.4"	""	"16.8"	""	"18.0"	""	"21.0"	"1.5"	"27.7"	"26.4"	""	"365"	"29"	"32.000"	"25.000"	"0.0247322067754064"	"14"	"0.0003839"	"0.00162"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9038"	"0.0000"	"1"	"1"	"1"	"591.36871"	"1772.09159"	"1772.09336"	"-1.00"	"-0.00059"	"12/106"	"12"	"106"	"1971551.02874756"	"HCD"	"MS2"	"27.05954"	"54.8"	"100.000"	"78.9775"	"26628"	"26628"	"26609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.7"	""	"77.5"	""	"86.0"	""	"77.9"	"1.1"	"96.8"	"111.2"	""	"357"	"52"	"32.000"	"25.000"	"0.0001223596484218"	"21"	"0"	"3.619E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.54944"	"1772.09160"	"1772.09336"	"-0.99"	"-0.00088"	"9/106"	"9"	"106"	"903123.739501953"	"HCD"	"MS2"	"42.61517"	"56.2"	"100.000"	"78.7058"	"26517"	"26517"	"26497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.7"	""	"79.8"	""	"82.3"	""	"77.7"	"1.4"	"93.3"	"114.7"	""	"360"	"59"	"32.000"	"25.000"	"2.27652542544807E-05"	"16"	"0"	"1.882E-06"	"1.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9153"	"0.0000"	"1"	"1"	"1"	"591.36877"	"1772.09177"	"1772.09336"	"-0.90"	"-0.00053"	"14/106"	"14"	"106"	"2777367.96520996"	"HCD"	"MS2"	"32.41793"	"67.3"	"100.000"	"78.6101"	"26529"	"26529"	"26511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.2"	""	"95.5"	""	"95.1"	""	"90.5"	""	"111.7"	"138.6"	""	"360"	"59"	"32.000"	"25.000"	"2.03363264641104E-05"	"22"	"0"	"1.656E-05"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.54962"	"1772.09197"	"1772.09336"	"-0.78"	"-0.00070"	"9/106"	"9"	"106"	"895250.658203125"	"HCD"	"MS2"	"52.55799"	"53.8"	"100.000"	"78.6564"	"26548"	"26548"	"26527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.4"	""	"77.5"	""	"81.7"	""	"67.8"	""	"102.6"	"101.6"	""	"360"	"61"	"32.000"	"25.000"	"1.53204846876427E-05"	"16"	"0"	"3.839E-06"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"591.36884"	"1772.09195"	"1772.09336"	"-0.79"	"-0.00047"	"13/106"	"13"	"106"	"1023369.07598877"	"HCD"	"MS2"	"8.257463"	"29.8"	"100.000"	"89.7277"	"30970"	"30970"	"30962"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.9"	""	"45.2"	""	"46.0"	""	"40.5"	""	"45.4"	"61.6"	""	"360"	"53"	"32.000"	"25.000"	"9.98326283324238E-05"	"18"	"0"	"2.994E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9273"	"0.0000"	"1"	"1"	"1"	"591.36890"	"1772.09214"	"1772.09336"	"-0.69"	"-0.00041"	"14/106"	"14"	"106"	"2368912.86035156"	"HCD"	"MS2"	"23.30781"	"61.5"	"100.000"	"78.9193"	"26656"	"26656"	"26639"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.6"	""	"87.4"	""	"93.3"	""	"80.4"	""	"105.7"	"115.2"	""	"361"	"55"	"32.000"	"25.000"	"5.40103766907778E-05"	"20"	"0"	"1.481E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.54974"	"1772.09221"	"1772.09336"	"-0.65"	"-0.00057"	"11/106"	"11"	"106"	"138453.439147949"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"83.2877"	"28437"	"28437"	"28413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.8"	""	"13.6"	""	"14.7"	""	"7.5"	""	"9.8"	"16.4"	""	"361"	"35"	"32.000"	"25.000"	"0.00522970517580089"	"15"	"0.0001308"	"0.0002844"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.54993"	"1772.09258"	"1772.09336"	"-0.44"	"-0.00039"	"8/106"	"8"	"106"	"121944.159667969"	"HCD"	"MS2"	"22.48582"	"9.6"	"100.000"	"89.4501"	"30864"	"30864"	"30858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"16.5"	""	"17.2"	""	"15.0"	""	"14.5"	"14.8"	""	"350"	"24"	"32.000"	"25.000"	"0.0737968881000019"	"14"	"0.0001889"	"0.001077"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.54993"	"1772.09258"	"1772.09336"	"-0.44"	"-0.00039"	"14/106"	"14"	"106"	"190359.909973145"	"HCD"	"MS2"	"33.27646"	"14.3"	"100.000"	"79.0329"	"26651"	"26651"	"26625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.0"	""	"14.5"	""	"22.0"	""	"21.2"	""	"23.9"	"30.5"	""	"350"	"45"	"32.000"	"25.000"	"0.000512906317918806"	"15"	"0"	"8.861E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.54999"	"1772.09270"	"1772.09336"	"-0.37"	"-0.00033"	"18/106"	"18"	"106"	"329241.322937012"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"89.7321"	"30971"	"30971"	"30962"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.0"	""	"39.0"	""	"38.1"	""	"30.9"	""	"31.4"	"48.1"	""	"350"	"66"	"32.000"	"25.000"	"4.33548860085825E-06"	"17"	"0"	"5.375E-06"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.36914"	"1772.09287"	"1772.09336"	"-0.28"	"-0.00016"	"13/106"	"13"	"106"	"3099825.27484131"	"HCD"	"MS2"	"25.45206"	"79.1"	"100.000"	"78.6616"	"26499"	"26499"	"26481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.3"	""	"112.2"	""	"126.1"	""	"104.5"	""	"134.1"	"153.4"	""	"350"	"52"	"32.000"	"25.000"	"9.95492628976722E-05"	"16"	"0"	"1.43E-05"	"1.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.55011"	"1772.09294"	"1772.09336"	"-0.23"	"-0.00021"	"13/106"	"13"	"106"	"159545.502990723"	"HCD"	"MS2"	"42.09316"	"9.2"	"100.000"	"89.3185"	"30774"	"30774"	"30761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.8"	""	"14.8"	""	"17.0"	""	"12.8"	""	"11.6"	"14.9"	""	"350"	"47"	"32.000"	"25.000"	"0.000337316859808414"	"15"	"0.0001889"	"0.0007445"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.55017"	"1772.09307"	"1772.09336"	"-0.17"	"-0.00015"	"5/106"	"5"	"106"	"65155.6586914063"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"89.8722"	"30988"	"30988"	"30973"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.1"	""	"5.0"	""	"7.6"	""	"7.5"	""	"9.9"	"5.9"	""	"350"	"18"	"32.000"	"25.000"	"0.271667726742664"	"14"	"0.0008125"	"0.007874"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9825"	"0.0000"	"1"	"1"	"1"	"591.36932"	"1772.09342"	"1772.09336"	"0.03"	"0.00002"	"14/106"	"14"	"106"	"901396.819702148"	"HCD"	"MS2"	"6.363077"	"26.9"	"100.000"	"89.6398"	"30898"	"30898"	"30886"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.9"	""	"44.2"	""	"49.6"	""	"32.1"	""	"39.6"	"50.9"	""	"350"	"57"	"32.000"	"25.000"	"3.85512131034355E-05"	"17"	"0"	"1.868E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.36938"	"1772.09360"	"1772.09336"	"0.14"	"0.00008"	"13/106"	"13"	"106"	"519235.098754883"	"HCD"	"MS2"	"15.42537"	"15.1"	"100.000"	"89.3535"	"30787"	"30787"	"30775"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.0"	""	"20.6"	""	"24.4"	""	"18.8"	""	"25.7"	"33.5"	""	"348"	"52"	"32.000"	"25.000"	"0.000117367876819438"	"16"	"0"	"2.753E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLATIEAINGGK"	"[R].lLLATIEAInGGk.[V]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9882"	"0.0000"	"1"	"1"	"1"	"886.55054"	"1772.09380"	"1772.09336"	"0.25"	"0.00022"	"12/106"	"12"	"106"	"422766.960754395"	"HCD"	"MS2"	"0"	"30.4"	"100.000"	"89.5887"	"30878"	"30878"	"30866"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.2"	""	"46.4"	""	"52.0"	""	"34.3"	""	"45.0"	"63.0"	""	"338"	"85"	"32.000"	"25.000"	"5.24670570393691E-08"	"18"	"0"	"2.096E-07"	"1.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"MLSYDPMLLFTGR"	"[K].mLSYDPMLLFTGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"886.96619"	"1772.92510"	"1772.92766"	"-1.45"	"-0.00128"	"7/112"	"7"	"112"	"163116.577880859"	"HCD"	"MS2"	"35.6485"	"10.4"	"100.000"	"86.3216"	"29615"	"29615"	"29585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.4"	""	"15.4"	""	"17.4"	""	"13.3"	""	"16.7"	"23.4"	""	"1036"	"2"	"37.000"	"30.000"	"31.7197502913433"	"14"	"0.003788"	"0.08946"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLIAQQMMPEVR"	"[R].lDLIAQQMMPEVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"0"	"2"	"2"	"0.8382"	"0.0000"	"1"	"1"	"1"	"886.98230"	"1772.95732"	"1772.96003"	"-1.53"	"-0.00135"	"10/128"	"10"	"128"	"276373.807189941"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"74.3284"	"24794"	"24794"	"24767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.7"	""	"25.8"	""	"27.0"	""	"21.6"	""	"28.1"	"35.9"	""	"1049"	"68"	"37.000"	"30.000"	"7.90215406214946E-06"	"27"	"0"	"3.457E-06"	"1.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLIAQQMMPEVR"	"[R].lDLIAQQMMPEVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"591.65778"	"1772.95877"	"1772.96003"	"-0.71"	"-0.00042"	"13/128"	"13"	"128"	"2101533.61358643"	"HCD"	"MS2"	"6.391734"	"39.0"	"100.000"	"74.4369"	"24838"	"24838"	"24815"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.0"	""	"49.5"	""	"56.0"	""	"59.0"	""	"68.1"	"83.7"	""	"1051"	"45"	"37.000"	"30.000"	"0.00154373489210578"	"22"	"0"	"2.796E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIENLHDVAYK"	"[R].iIENLHDVAYk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"591.68036"	"1773.02652"	"1773.03109"	"-2.58"	"-0.00152"	"11/102"	"11"	"102"	"7185202.68060303"	"HCD"	"MS2"	"46.24113"	"224.5"	"100.000"	"45.1885"	"12932"	"12932"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"308.0"	""	"271.4"	""	"279.1"	""	"370.8"	"2.2"	"450.8"	"447.6"	""	"891"	"22"	"36.000"	"29.000"	"0.308210697544386"	"23"	"0.0001308"	"0.0002553"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLPFLLLQGSADR"	"[R].lTLPFLLLQGSADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"591.68695"	"1773.04630"	"1773.04719"	"-0.50"	"-0.00030"	"14/136"	"14"	"136"	"206464.883056641"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"87.8392"	"30219"	"30219"	"30206"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.3"	""	"6.1"	""	"5.3"	""	"6.4"	""	"6.3"	"4.3"	""	"704"	"40"	"35.000"	"28.000"	"0.00326996168146538"	"23"	"0"	"7.31E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLPFLLLQGSADR"	"[R].lTLPFLLLQGSADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"887.02679"	"1773.04631"	"1773.04719"	"-0.49"	"-0.00044"	"4/136"	"4"	"136"	"68754.7481689453"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"88.0578"	"30350"	"30350"	"30339"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.0"	""	"4.3"	""	"2.2"	""	"3.2"	""	"4.9"	"6.4"	""	"704"	"17"	"35.000"	"28.000"	"0.747382050624077"	"15"	"0.0006396"	"0.006235"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLPFLLLQGSADR"	"[R].lTLPFLLLQGSADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.02728"	"1773.04729"	"1773.04719"	"0.06"	"0.00005"	"4/136"	"4"	"136"	"82675.0994873047"	"HCD"	"MS2"	"15.00947"	"3.0"	"100.000"	"87.7791"	"30246"	"30246"	"30232"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	"2.4"	""	"3.6"	""	"6.8"	""	"4.0"	"4.8"	""	"706"	"2"	"35.000"	"28.000"	"22.4271818943666"	"13"	"0.001217"	"0.01862"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVATALQNLQTK"	"[K].qVATALQNLQTk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"591.69208"	"1773.06168"	"1773.06345"	"-1.00"	"-0.00059"	"9/124"	"9"	"124"	"9732571.35266113"	"HCD"	"MS2"	"32.71842"	"281.8"	"100.000"	"45.2598"	"12961"	"12961"	"12939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"383.6"	""	"347.4"	""	"350.4"	""	"462.9"	"0.4"	"563.3"	"565.6"	""	"626"	"40"	"34.000"	"27.000"	"0.00340835119213364"	"22"	"0"	"0.0001307"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVATALQNLQTK"	"[K].qVATALQNLQTk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"887.03516"	"1773.06304"	"1773.06345"	"-0.24"	"-0.00021"	"10/124"	"10"	"124"	"568957.5234375"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"45.3496"	"12998"	"12998"	"12971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.3"	""	"47.5"	""	"40.6"	""	"84.9"	""	"108.4"	"99.9"	""	"596"	"70"	"34.000"	"27.000"	"3.07055063891601E-06"	"27"	"0"	"2.003E-06"	"1.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVATALQNLQTK"	"[K].qVATALQNLQTk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"591.69257"	"1773.06314"	"1773.06345"	"-0.17"	"-0.00010"	"11/124"	"11"	"124"	"9323433.20446777"	"HCD"	"MS2"	"39.72018"	"274.8"	"100.000"	"45.0049"	"12808"	"12808"	"12784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"396.3"	""	"331.4"	""	"332.8"	""	"454.8"	""	"539.3"	"559.8"	""	"596"	"32"	"34.000"	"27.000"	"0.0201472726666811"	"23"	"0.0001308"	"0.0002068"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVATALQNLQTK"	"[K].qVATALQNLQTk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"887.03613"	"1773.06499"	"1773.06345"	"0.87"	"0.00077"	"11/124"	"11"	"124"	"739850.086730957"	"HCD"	"MS2"	"0"	"58.4"	"100.000"	"45.0578"	"12830"	"12830"	"12800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.2"	""	"56.9"	""	"58.4"	""	"99.7"	""	"126.9"	"132.2"	""	"617"	"78"	"34.000"	"27.000"	"5.08458097785619E-07"	""	"0"	"2.903E-06"	"1.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHALLAYTLGVK"	"[R].eHALLAYTLGVk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"444.02188"	"1773.06569"	"1773.06748"	"-1.01"	"-0.00045"	"6/102"	"6"	"102"	"13967475.9609375"	"HCD"	"MS2"	"2.114135"	"338.2"	"100.000"	"49.4201"	"14610"	"14610"	"14591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"516.8"	""	"526.4"	""	"549.4"	""	"524.1"	""	"542.8"	"537.8"	""	"614"	"39"	"34.000"	"27.000"	"0.00370798847377781"	"15"	"0"	"0.0001209"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHALLAYTLGVK"	"[R].eHALLAYTLGVk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.69348"	"1773.06589"	"1773.06748"	"-0.89"	"-0.00053"	"12/102"	"12"	"102"	"28102218.3273926"	"HCD"	"MS2"	"4.138708"	"158.9"	"20.728"	"49.6710"	"14709"	"14709"	"14687"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.1"	""	"223.1"	""	"252.2"	""	"251.1"	""	"262.1"	"272.1"	""	"614"	"38"	"34.000"	"27.000"	"0.00445798266599436"	"15"	"0.0001308"	"0.0002749"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHALLAYTLGVK"	"[R].eHALLAYTLGVk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.69354"	"1773.06607"	"1773.06748"	"-0.79"	"-0.00047"	"15/102"	"15"	"102"	"23390110.2138672"	"HCD"	"MS2"	"15.37449"	"533.5"	"100.000"	"49.5846"	"14721"	"14721"	"14702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"813.4"	""	"807.8"	""	"838.7"	""	"854.2"	"3.8"	"865.9"	"859.3"	""	"614"	"52"	"34.000"	"27.000"	"0.000194598001355877"	"16"	"0"	"2.825E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHALLAYTLGVK"	"[R].eHALLAYTLGVk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.69366"	"1773.06644"	"1773.06748"	"-0.58"	"-0.00035"	"12/102"	"12"	"102"	"37703548.0612793"	"HCD"	"MS2"	"10.95198"	"180.8"	"19.499"	"49.9071"	"14852"	"14852"	"14830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.1"	""	"268.0"	""	"306.7"	""	"279.8"	""	"290.1"	"298.7"	""	"614"	"47"	"34.000"	"27.000"	"0.000645859981008307"	"15"	"0"	"6.117E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHALLAYTLGVK"	"[R].eHALLAYTLGVk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"887.03693"	"1773.06658"	"1773.06748"	"-0.51"	"-0.00045"	"19/102"	"19"	"102"	"3232745.52886963"	"HCD"	"MS2"	"0"	"212.9"	"100.000"	"49.4295"	"14614"	"14614"	"14591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.9"	""	"304.1"	""	"343.8"	""	"326.2"	""	"328.1"	"362.5"	""	"601"	"74"	"34.000"	"27.000"	"1.22699975592974E-06"	"25"	"0"	"2.46E-06"	"1.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHALLAYTLGVK"	"[R].eHALLAYTLGVk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.69385"	"1773.06699"	"1773.06748"	"-0.27"	"-0.00016"	"14/102"	"14"	"102"	"31810721.4031982"	"HCD"	"MS2"	"9.433956"	"751.3"	"100.000"	"49.3420"	"14578"	"14578"	"14559"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1193.8"	""	"1131.2"	""	"1241.0"	""	"1191.8"	""	"1153.6"	"1186.9"	""	"603"	"50"	"34.000"	"27.000"	"0.000285948166685221"	"16"	"0"	"4.189E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHALLAYTLGVK"	"[R].eHALLAYTLGVk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"444.02234"	"1773.06753"	"1773.06748"	"0.03"	"0.00001"	"6/102"	"6"	"102"	"15435558.2263794"	"HCD"	"MS2"	"5.721076"	"348.1"	"100.000"	"49.6826"	"14761"	"14761"	"14734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"558.2"	""	"535.4"	""	"574.1"	""	"548.6"	"6.6"	"502.8"	"562.1"	""	"574"	"39"	"34.000"	"27.000"	"0.00328006082084665"	"15"	"0"	"4.393E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHALLAYTLGVK"	"[R].eHALLAYTLGVk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"887.03857"	"1773.06987"	"1773.06748"	"1.35"	"0.00120"	"19/102"	"19"	"102"	"3394329.28662109"	"HCD"	"MS2"	"0"	"211.9"	"100.000"	"49.6917"	"14765"	"14765"	"14734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"346.9"	""	"323.3"	""	"333.8"	""	"316.5"	"2.9"	"318.4"	"360.4"	""	"562"	"74"	"34.000"	"27.000"	"1.13947898460996E-06"	"25"	"0"	"4.008E-06"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDQLPLIIVCDR"	"[K].lTDQLPLIIVcDR.[F]"	"N-Term(TMT6plex); C11(Methylthio)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"887.49402"	"1773.98076"	"1773.98043"	"0.19"	"0.00017"	"10/134"	"10"	"134"	"179343.73236084"	"HCD"	"MS2"	"44.62475"	"10.0"	"100.000"	"86.4703"	"29727"	"29727"	"29711"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.7"	""	"11.8"	""	"14.5"	""	"16.3"	""	"17.7"	"21.9"	""	"1160"	"21"	"37.000"	"30.000"	"0.412503837918931"	"21"	"0.0005564"	"0.003362"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDQLPLIIVCDR"	"[K].lTDQLPLIIVcDR.[F]"	"N-Term(TMT6plex); C11(Methylthio)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.49500"	"1773.98271"	"1773.98043"	"1.29"	"0.00114"	"7/134"	"7"	"134"	"179079.771850586"	"HCD"	"MS2"	"52.1608"	"11.9"	"100.000"	"86.3771"	"29637"	"29637"	"29617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.9"	""	"15.1"	""	"18.5"	""	"22.2"	"1.4"	"17.7"	"21.6"	""	"1165"	"19"	"37.000"	"30.000"	"0.682803800431787"	"14"	"0.0003571"	"0.001483"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNVVEQEK"	"[K].kLNVVEQEk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"1"	"3"	"3"	"0.2059"	"0.0000"	"1"	"1"	"1"	"592.03888"	"1774.10208"	"1774.10415"	"-1.16"	"-0.00069"	"7/84"	"7"	"84"	"8960049.49761963"	"HCD"	"MS2"	"10.69315"	"422.8"	"90.433"	"33.8136"	"8243"	"8243"	"8220"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"709.7"	""	"473.5"	""	"511.5"	""	"700.5"	"0.3"	"807.9"	"802.8"	""	"348"	"34"	"32.000"	"25.000"	"0.00691113296076827"	""	"0"	"0.0001728"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTLPVSFAQLK"	"[R].lVTLPVSFAQLk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"3"	"3"	"0.9661"	"0.0000"	"1"	"1"	"1"	"592.04541"	"1774.12168"	"1774.12426"	"-1.46"	"-0.00086"	"9/100"	"9"	"100"	"2441095.61932373"	"HCD"	"MS2"	"35.00774"	"62.0"	"100.000"	"77.8840"	"26233"	"26233"	"26213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.8"	""	"91.8"	""	"98.6"	""	"94.1"	""	"107.7"	"110.7"	""	"249"	"59"	"30.000"	"23.000"	"1.66789747584529E-05"	"19"	"0"	"2.231E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTLPVSFAQLK"	"[R].lVTLPVSFAQLk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.04572"	"1774.12259"	"1774.12426"	"-0.94"	"-0.00056"	"12/100"	"12"	"100"	"445596.27331543"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"78.1925"	"26359"	"26359"	"26335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.6"	""	"18.6"	""	"25.7"	""	"32.1"	""	"37.3"	"37.7"	""	"249"	"31"	"30.000"	"23.000"	"0.0105966685756196"	"15"	"0.0002277"	"0.001138"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTLPVSFAQLK"	"[R].lVTLPVSFAQLk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.04572"	"1774.12259"	"1774.12426"	"-0.94"	"-0.00056"	"10/100"	"10"	"100"	"495179.091369629"	"HCD"	"MS2"	"11.03179"	"22.7"	"100.000"	"78.2484"	"26331"	"26331"	"26305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.0"	""	"23.4"	""	"36.5"	""	"37.9"	""	"49.0"	"39.0"	""	"249"	"37"	"30.000"	"23.000"	"0.00229176114182885"	"15"	"0.0001859"	"0.0003649"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTLPVSFAQLK"	"[R].lVTLPVSFAQLk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.04578"	"1774.12278"	"1774.12426"	"-0.84"	"-0.00050"	"13/100"	"13"	"100"	"2574495.50390625"	"HCD"	"MS2"	"41.00051"	"67.2"	"100.000"	"77.9401"	"26205"	"26205"	"26185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.8"	""	"91.8"	""	"100.5"	""	"112.2"	""	"117.7"	"115.4"	""	"249"	"45"	"30.000"	"23.000"	"0.000383856899806045"	"15"	"0"	"4.908E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTLPVSFAQLK"	"[R].lVTLPVSFAQLk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.56592"	"1774.12456"	"1774.12426"	"0.17"	"0.00015"	"12/100"	"12"	"100"	"378214.204284668"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"77.9896"	"26276"	"26276"	"26257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.8"	""	"35.3"	""	"30.2"	""	"47.8"	""	"47.9"	"46.7"	""	"240"	"34"	"30.000"	"23.000"	"0.00511895422561911"	"15"	"0.0001889"	"0.0005803"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTLPVSFAQLK"	"[R].lVTLPVSFAQLk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"887.56714"	"1774.12700"	"1774.12426"	"1.54"	"0.00137"	"8/100"	"8"	"100"	"397594.947021484"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"78.0090"	"26233"	"26233"	"26215"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.1"	""	"27.3"	""	"38.7"	""	"51.6"	""	"41.7"	"48.5"	""	"238"	"44"	"30.000"	"23.000"	"0.00051469145893166"	"22"	"0.0001859"	"0.0003242"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQQMLNDFGPQR"	"[R].lVQQMLNDFGPQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"887.97644"	"1774.94560"	"1774.94715"	"-0.87"	"-0.00078"	"5/116"	"5"	"116"	"326725.494445801"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"68.7247"	"22455"	"22455"	"22426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.9"	""	"39.8"	""	"35.0"	""	"33.7"	"0.5"	"45.6"	"42.4"	""	"1097"	"21"	"37.000"	"30.000"	"0.478824795560879"	"16"	"0.0003146"	"0.001466"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQQMLNDFGPQR"	"[R].lVQQMLNDFGPQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"887.97711"	"1774.94695"	"1774.94715"	"-0.12"	"-0.00010"	"16/116"	"16"	"116"	"377301.144287109"	"HCD"	"MS2"	"0"	"23.7"	"100.000"	"68.5620"	"22440"	"22440"	"22410"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.5"	""	"38.1"	""	"34.0"	""	"31.5"	""	"41.8"	"46.0"	""	"1108"	"36"	"37.000"	"30.000"	"0.013820054787264"	"20"	"0.0001859"	"0.0003192"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NELESYAYSLK"	"[R].nELESYAYSLk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"887.98492"	"1774.96257"	"1774.96274"	"-0.09"	"-0.00008"	"13/114"	"13"	"114"	"312295.713256836"	"HCD"	"MS2"	"11.4976"	"34.1"	"100.000"	"54.5690"	"16685"	"16685"	"16656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.9"	""	"45.3"	""	"55.5"	""	"60.1"	""	"55.8"	"59.7"	""	"1106"	"54"	"37.000"	"30.000"	"0.00023918014856236"	"17"	"0"	"2.196E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NELESYAYSLK"	"[R].nELESYAYSLk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"887.98523"	"1774.96318"	"1774.96274"	"0.25"	"0.00022"	"9/114"	"9"	"114"	"379498.172668457"	"HCD"	"MS2"	"20.47942"	"38.6"	"100.000"	"54.7272"	"16803"	"16803"	"16773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.5"	""	"43.6"	""	"54.8"	""	"71.9"	""	"63.5"	"79.2"	""	"1094"	"57"	"37.000"	"30.000"	"9.93087067536906E-05"	"24"	"0"	"1.257E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGNMTAALQAALK"	"[R].qGNMTAALQAALk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"592.34576"	"1775.02274"	"1775.02496"	"-1.25"	"-0.00074"	"11/120"	"11"	"120"	"2376278.05456543"	"HCD"	"MS2"	"18.6284"	"96.6"	"100.000"	"54.9875"	"16856"	"16856"	"16828"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.9"	""	"123.8"	""	"118.9"	""	"148.4"	"0.7"	"177.4"	"198.7"	""	"1025"	"33"	"37.000"	"30.000"	"0.0246998246282878"	"25"	"0"	"3.431E-05"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGNMTAALQAALK"	"[R].qGNMTAALQAALk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"592.34698"	"1775.02640"	"1775.02496"	"0.81"	"0.00048"	"12/120"	"12"	"120"	"3928185.13885498"	"HCD"	"MS2"	"67.7316"	"132.2"	"100.000"	"55.1153"	"16962"	"16962"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.0"	""	"168.7"	""	"163.3"	""	"190.9"	"2.0"	"260.9"	"255.4"	""	"1000"	"36"	"36.000"	"30.000"	"0.0124156655264779"	"25"	"0"	"9.34E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLLADPTGAFGK"	"[K].vQLLADPTGAFGk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.35291"	"1775.04416"	"1775.04674"	"-1.45"	"-0.00086"	"10/122"	"10"	"122"	"4796582.44018555"	"HCD"	"MS2"	"4.178449"	"124.1"	"100.000"	"64.3793"	"20741"	"20741"	"20723"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.3"	""	"183.3"	""	"178.5"	""	"177.2"	""	"229.7"	"239.8"	""	"866"	"81"	"36.000"	"29.000"	"3.6265017916094E-07"	"18"	"0"	"9.045E-07"	"1.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLLADPTGAFGK"	"[K].vQLLADPTGAFGk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"888.02594"	"1775.04460"	"1775.04674"	"-1.20"	"-0.00107"	"10/122"	"10"	"122"	"752079.462768555"	"HCD"	"MS2"	"0"	"55.9"	"100.000"	"64.3910"	"20746"	"20746"	"20723"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.7"	""	"76.1"	""	"84.1"	""	"85.1"	""	"106.4"	"101.5"	""	"865"	"49"	"36.000"	"29.000"	"0.000534547264964751"	"25"	"0"	"6.644E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLLADPTGAFGK"	"[K].vQLLADPTGAFGk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.9080"	"0.0000"	"1"	"1"	"1"	"888.02679"	"1775.04631"	"1775.04674"	"-0.24"	"-0.00021"	"11/122"	"11"	"122"	"3227034.15020752"	"HCD"	"MS2"	"0"	"200.3"	"100.000"	"64.0682"	"20614"	"20614"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.1"	""	"262.3"	""	"305.7"	""	"314.1"	"2.7"	"336.0"	"377.3"	""	"843"	"87"	"36.000"	"29.000"	"9.20020657841824E-08"	"26"	"0"	"1.26E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLLADPTGAFGK"	"[K].vQLLADPTGAFGk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.35364"	"1775.04636"	"1775.04674"	"-0.21"	"-0.00013"	"14/122"	"14"	"122"	"15805959.7663574"	"HCD"	"MS2"	"20.3316"	"376.8"	"100.000"	"64.0659"	"20613"	"20613"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"556.4"	""	"502.7"	""	"558.6"	""	"574.9"	""	"661.9"	"716.5"	""	"842"	"66"	"36.000"	"29.000"	"9.93761336169023E-06"	"17"	"0"	"5.256E-06"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLLADPTGAFGK"	"[K].vQLLADPTGAFGk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.35370"	"1775.04654"	"1775.04674"	"-0.11"	"-0.00007"	"12/122"	"12"	"122"	"10713972.1869507"	"HCD"	"MS2"	"28.10866"	"318.9"	"100.000"	"64.0168"	"20540"	"20540"	"20521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"443.9"	""	"442.4"	""	"495.0"	""	"493.8"	""	"547.4"	"597.5"	""	"842"	"55"	"36.000"	"29.000"	"0.000147326915318938"	"16"	"0"	"7.887E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLLADPTGAFGK"	"[K].vQLLADPTGAFGk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.35376"	"1775.04673"	"1775.04674"	"-0.01"	"-0.00001"	"10/122"	"10"	"122"	"6255943.37762451"	"HCD"	"MS2"	"6.04418"	"166.2"	"100.000"	"64.3234"	"20666"	"20666"	"20649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.1"	""	"217.8"	""	"257.6"	""	"244.9"	"0.2"	"294.5"	"315.6"	""	"830"	"71"	"36.000"	"29.000"	"3.08352942227131E-06"	"17"	"0"	"2E-06"	"1.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLLADPTGAFGK"	"[K].vQLLADPTGAFGk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"888.02710"	"1775.04692"	"1775.04674"	"0.10"	"0.00009"	"11/122"	"11"	"122"	"1188388.06298828"	"HCD"	"MS2"	"0"	"86.6"	"100.000"	"64.3278"	"20667"	"20667"	"20649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.5"	""	"105.6"	""	"142.9"	""	"126.7"	""	"147.5"	"174.1"	""	"830"	"88"	"36.000"	"29.000"	"7.04771115771624E-08"	""	"0"	"5.115E-06"	"1.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLLADPTGAFGK"	"[K].vQLLADPTGAFGk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"888.02832"	"1775.04936"	"1775.04674"	"1.48"	"0.00131"	"10/122"	"10"	"122"	"2738197.77600098"	"HCD"	"MS2"	"0"	"181.9"	"100.000"	"64.0216"	"20542"	"20542"	"20521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.9"	""	"247.4"	""	"269.9"	""	"293.1"	""	"297.8"	"345.0"	""	"801"	"65"	"36.000"	"29.000"	"1.32618014153778E-05"	"23"	"0"	"1.861E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSIAIDTIINQK"	"[K].tSIAIDTIINQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8916"	"0.0000"	"1"	"1"	"1"	"888.03741"	"1775.06755"	"1775.06787"	"-0.18"	"-0.00016"	"11/104"	"11"	"104"	"2020700.41119385"	"HCD"	"MS2"	"0"	"148.7"	"100.000"	"57.5665"	"17910"	"17910"	"17883"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.8"	""	"202.8"	""	"192.8"	""	"263.7"	"2.7"	"280.5"	"277.6"	""	"629"	"83"	"34.000"	"27.000"	"1.48463826477399E-07"	"27"	"0"	"1.401E-06"	"1.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSIAIDTIINQK"	"[K].tSIAIDTIINQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.8085"	"0.0000"	"1"	"1"	"1"	"592.36072"	"1775.06760"	"1775.06787"	"-0.15"	"-0.00009"	"8/104"	"8"	"104"	"12786429.1362915"	"HCD"	"MS2"	"11.11479"	"295.0"	"89.533"	"57.7565"	"18041"	"18041"	"18021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.1"	""	"397.6"	""	"393.4"	""	"506.0"	""	"541.9"	"591.4"	""	"629"	"47"	"34.000"	"27.000"	"0.000572295920032841"	"24"	"0"	"3.282E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSIAIDTIINQK"	"[K].tSIAIDTIINQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"888.03760"	"1775.06792"	"1775.06787"	"0.03"	"0.00002"	"20/104"	"20"	"104"	"1352906.32958984"	"HCD"	"MS2"	"0"	"98.7"	"100.000"	"57.6917"	"18015"	"18015"	"17989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.9"	""	"136.4"	""	"125.8"	""	"170.1"	"1.1"	"178.4"	"192.1"	""	"632"	"72"	"34.000"	"28.000"	"2.05440982148416E-06"	"26"	"0"	"1.234E-06"	"1.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSIAIDTIINQK"	"[K].tSIAIDTIINQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.8246"	"0.0000"	"1"	"1"	"1"	"592.36108"	"1775.06870"	"1775.06787"	"0.47"	"0.00028"	"10/104"	"10"	"104"	"12315356.5394897"	"HCD"	"MS2"	"11.90795"	"293.0"	"87.845"	"57.5899"	"17919"	"17919"	"17899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"380.1"	""	"377.3"	""	"380.9"	""	"480.4"	""	"573.3"	"589.0"	""	"622"	"57"	"34.000"	"27.000"	"5.77777185533518E-05"	"26"	"0"	"1.232E-05"	"1.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKGNTEGLQK"	"[K].lkGNTEGLQk.[S]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.37091"	"1775.09818"	"1775.09939"	"-0.69"	"-0.00041"	"20/90"	"20"	"90"	"3953302.16931152"	"HCD"	"MS2"	"6.239056"	"302.7"	"100.000"	"32.1798"	"7581"	"7581"	"7565"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"661.9"	""	"379.6"	""	"457.6"	""	"471.0"	""	"410.4"	"474.8"	""	"451"	"12"	"33.000"	"26.000"	"1.47960757551305"	"13"	"0.0001889"	"0.0004274"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFIGNLNTLVVK"	"[R].vFIGNLNTLVVk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.9326"	"0.0000"	"1"	"1"	"1"	"888.06299"	"1775.11870"	"1775.11951"	"-0.46"	"-0.00041"	"11/102"	"11"	"102"	"539679.791687012"	"HCD"	"MS2"	"0"	"44.4"	"100.000"	"71.6604"	"23705"	"23705"	"23674"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.2"	""	"43.3"	""	"47.7"	""	"79.6"	"1.2"	"101.2"	"100.6"	""	"315"	"89"	"31.000"	"24.000"	"2.01039112387787E-08"	"24"	"0"	"9.397E-07"	"1.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGNMTAALQAALK"	"[R].qGNMTAALqAALk.[N]"	"N-Term(TMT6plex); Q9(Deamidated); K13(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"888.49323"	"1775.97917"	"1776.00898"	"-16.78"	"-0.01490"	"13/120"	"13"	"120"	"811420.619262695"	"HCD"	"MS2"	"19.52952"	"63.8"	"100.000"	"54.7875"	"16774"	"16774"	"16752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.2"	""	"87.3"	""	"92.5"	""	"81.0"	""	"114.8"	"112.4"	""	"1163"	"17"	"37.000"	"30.000"	"1.25762082154726"	"17"	"0.00103"	"0.013"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGNMTAALQAALK"	"[R].qGNMTAALqAALk.[N]"	"N-Term(TMT6plex); Q9(Deamidated); K13(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"3"	"3"	"0.4500"	"0.0000"	"1"	"1"	"1"	"592.66461"	"1775.97928"	"1776.00898"	"-16.72"	"-0.00990"	"10/120"	"10"	"120"	"5172613.37213135"	"HCD"	"MS2"	"43.70632"	"175.5"	"100.000"	"55.0649"	"16941"	"16941"	"16917"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.8"	""	"236.4"	""	"227.6"	""	"252.8"	"2.7"	"325.9"	"335.8"	""	"1163"	"20"	"37.000"	"30.000"	"0.628853842679751"	"18"	"0.0003839"	"0.001849"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGNMTAALQAALK"	"[R].qGNMTAALqAALk.[N]"	"N-Term(TMT6plex); Q9(Deamidated); K13(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"3"	"3"	"0.5652"	"0.0000"	"1"	"1"	"1"	"592.66534"	"1775.98148"	"1776.00898"	"-15.48"	"-0.00917"	"11/120"	"11"	"120"	"4215186.34936523"	"HCD"	"MS2"	"48.54661"	"144.4"	"100.000"	"54.9093"	"16824"	"16824"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.1"	""	"212.6"	""	"184.0"	""	"195.1"	""	"280.7"	"278.4"	""	"1189"	"23"	"37.000"	"30.000"	"0.324453048418761"	"18"	"0.0001859"	"0.0003265"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVNVPPPFLGLPR"	"[K].gALVNVPPPFLGLPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"888.53912"	"1776.07097"	"1776.07334"	"-1.33"	"-0.00119"	"15/134"	"15"	"134"	"425895.969726563"	"HCD"	"MS2"	"0"	"18.5"	"100.000"	"72.7996"	"24170"	"24170"	"24143"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.1"	""	"25.1"	""	"32.5"	""	"27.8"	""	"33.6"	"29.5"	""	"610"	"21"	"34.000"	"27.000"	"0.234584784287416"	"14"	"0.0001889"	"0.0006302"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVNVPPPFLGLPR"	"[K].gALVNVPPPFLGLPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"888.53931"	"1776.07134"	"1776.07334"	"-1.13"	"-0.00100"	"15/134"	"15"	"134"	"409273.879882813"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"72.8500"	"24139"	"24139"	"24113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.2"	""	"23.0"	""	"29.8"	""	"31.6"	""	"29.2"	"39.4"	""	"601"	"22"	"34.000"	"27.000"	"0.205042777589572"	"14"	"0.0001889"	"0.0005596"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVNVPPPFLGLPR"	"[K].gALVNVPPPFLGLPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"888.53943"	"1776.07158"	"1776.07334"	"-0.99"	"-0.00088"	"11/134"	"11"	"134"	"384210.814025879"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"73.1502"	"24261"	"24261"	"24241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.6"	""	"24.1"	""	"20.0"	""	"19.0"	""	"30.8"	"28.3"	""	"603"	"45"	"34.000"	"27.000"	"0.000989207308736053"	"26"	"0"	"5.995E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVNVPPPFLGLPR"	"[K].gALVNVPPPFLGLPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"888.53967"	"1776.07207"	"1776.07334"	"-0.72"	"-0.00064"	"11/134"	"11"	"134"	"369463.636474609"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"73.1502"	"24313"	"24313"	"24287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.4"	""	"22.3"	""	"23.7"	""	"27.2"	""	"23.5"	"31.4"	""	"602"	"41"	"34.000"	"27.000"	"0.00256192549498915"	"24"	"0"	"8.73E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVNVPPPFLGLPR"	"[K].gALVNVPPPFLGLPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"592.69556"	"1776.07212"	"1776.07334"	"-0.69"	"-0.00041"	"11/134"	"11"	"134"	"2290956.80737305"	"HCD"	"MS2"	"8.369648"	"24.6"	"100.000"	"73.0280"	"24263"	"24263"	"24239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.8"	""	"33.5"	""	"29.0"	""	"45.7"	""	"44.9"	"51.7"	""	"602"	"39"	"34.000"	"27.000"	"0.00373737344585315"	"18"	"0"	"3.079E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVNVPPPFLGLPR"	"[K].gALVNVPPPFLGLPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.69592"	"1776.07322"	"1776.07334"	"-0.07"	"-0.00004"	"15/134"	"15"	"134"	"2189217.94561768"	"HCD"	"MS2"	"15.3543"	"28.9"	"100.000"	"73.1200"	"24249"	"24249"	"24225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.7"	""	"35.0"	""	"38.4"	""	"51.4"	"0.0"	"57.3"	"53.8"	""	"601"	"30"	"34.000"	"27.000"	"0.0306792314854158"	"14"	"0"	"5.879E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CATSTPAFFAEK"	"[K].cATSTPAFFAEk.[L]"	"N-Term(TMT6plex); C1(Methylthio); K12(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"888.95685"	"1776.90642"	"1776.90648"	"-0.04"	"-0.00003"	"15/104"	"15"	"104"	"720573.307495117"	"HCD"	"MS2"	"33.59046"	"69.2"	"100.000"	"55.7841"	"17236"	"17236"	"17205"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.7"	""	"76.4"	""	"66.9"	""	"175.5"	""	"130.0"	"114.4"	""	"952"	"40"	"36.000"	"29.000"	"0.00534080784247735"	"15"	"0.0001308"	"0.0002235"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQSSLVPALTEFVR"	"[K].tQSSLVPALTEFVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MGD0"	"Protein CutA OS=Rattus norvegicus OX=10116 GN=Cuta PE=1 SV=2"	"Q6MGD0"	"Protein CutA OS=Rattus norvegicus OX=10116 GN=Cuta PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"889.00372"	"1777.00017"	"1777.00572"	"-3.12"	"-0.00277"	"8/148"	"8"	"148"	"387435.912963867"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"67.5825"	"22040"	"22040"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.9"	""	"36.9"	""	"29.5"	""	"51.3"	""	"54.8"	"61.8"	""	"1086"	"34"	"37.000"	"30.000"	"0.0228454559212753"	"23"	"0.0006037"	"0.004846"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQSSLVPALTEFVR"	"[K].tQSSLVPALTEFVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MGD0"	"Protein CutA OS=Rattus norvegicus OX=10116 GN=Cuta PE=1 SV=2"	"Q6MGD0"	"Protein CutA OS=Rattus norvegicus OX=10116 GN=Cuta PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.00684"	"1777.00595"	"1777.00572"	"0.13"	"0.00008"	"10/148"	"10"	"148"	"1642340.36590576"	"HCD"	"MS2"	"45.07906"	"32.5"	"100.000"	"67.7878"	"22073"	"22073"	"22042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.0"	""	"42.7"	""	"40.2"	""	"54.9"	"1.3"	"61.3"	"73.4"	""	"1084"	"8"	"37.000"	"30.000"	"7.96158042482977"	"13"	"0.0001889"	"0.0009509"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADK"	"[K].iTLPVDFVTADk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.02728"	"1777.04729"	"1777.05116"	"-2.18"	"-0.00193"	"11/106"	"11"	"106"	"1681602.23687744"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"71.6856"	"23715"	"23715"	"23690"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.4"	""	"101.7"	""	"119.5"	""	"180.6"	""	"260.5"	"241.3"	""	"758"	"44"	"35.000"	"28.000"	"0.00143099860360733"	"15"	"0"	"3.168E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADK"	"[K].iTLPVDFVTADk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.02747"	"1777.04766"	"1777.05116"	"-1.97"	"-0.00175"	"9/106"	"9"	"106"	"1079044.12109375"	"HCD"	"MS2"	"11.2009"	"75.7"	"100.000"	"71.7632"	"23695"	"23695"	"23667"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.5"	""	"73.7"	""	"84.5"	""	"136.6"	""	"179.9"	"176.8"	""	"741"	"32"	"35.000"	"28.000"	"0.02598891880646"	"14"	"0"	"0.0001164"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADK"	"[K].iTLPVDFVTADk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"593.02081"	"1777.04789"	"1777.05116"	"-1.84"	"-0.00109"	"10/106"	"10"	"106"	"4887181.86608887"	"HCD"	"MS2"	"11.93219"	"140.2"	"100.000"	"71.7815"	"23702"	"23702"	"23683"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.8"	""	"166.2"	""	"161.1"	""	"216.1"	""	"319.3"	"311.7"	""	"741"	"22"	"35.000"	"28.000"	"0.251066178569755"	"20"	"0.0001308"	"0.0002073"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADK"	"[K].iTLPVDFVTADk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"593.02106"	"1777.04862"	"1777.05116"	"-1.43"	"-0.00085"	"14/106"	"14"	"106"	"5812387.40612793"	"HCD"	"MS2"	"7.164293"	"159.9"	"100.000"	"71.7431"	"23739"	"23739"	"23722"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"185.3"	""	"175.6"	""	"187.3"	""	"270.9"	""	"345.4"	"356.4"	""	"738"	"21"	"35.000"	"28.000"	"0.269790321805381"	"19"	"0"	"9.625E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADK"	"[K].iTLPVDFVTADk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"593.02118"	"1777.04898"	"1777.05116"	"-1.22"	"-0.00072"	"11/106"	"11"	"106"	"1961958.44250488"	"HCD"	"MS2"	"20.55899"	"62.3"	"100.000"	"72.0368"	"23858"	"23858"	"23839"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.1"	""	"73.3"	""	"72.3"	""	"113.1"	"1.7"	"125.8"	"136.3"	""	"740"	"32"	"35.000"	"28.000"	"0.0247857305484115"	"22"	"0"	"6.294E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADK"	"[K].iTLPVDFVTADk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"889.02838"	"1777.04949"	"1777.05116"	"-0.94"	"-0.00084"	"14/106"	"14"	"106"	"576001.967895508"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"72.0526"	"23813"	"23813"	"23793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.5"	""	"40.9"	""	"40.1"	""	"73.0"	"1.1"	"92.5"	"98.8"	""	"751"	"28"	"35.000"	"28.000"	"0.0634760569832046"	"15"	"0.0001889"	"0.0004097"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADK"	"[K].iTLPVDFVTADk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"889.02850"	"1777.04973"	"1777.05116"	"-0.80"	"-0.00071"	"9/106"	"9"	"106"	"327938.710754395"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"72.0485"	"23863"	"23863"	"23839"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.4"	""	"21.4"	""	"30.7"	""	"41.2"	""	"58.0"	"64.8"	""	"751"	"58"	"35.000"	"28.000"	"6.0201864420411E-05"	"22"	"0"	"2.054E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADK"	"[K].iTLPVDFVTADk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"593.02173"	"1777.05063"	"1777.05116"	"-0.30"	"-0.00018"	"8/106"	"8"	"106"	"2213291.61187744"	"HCD"	"MS2"	"15.88953"	"69.0"	"100.000"	"72.0961"	"23831"	"23831"	"23809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.5"	""	"80.5"	""	"84.4"	""	"120.9"	"1.1"	"141.2"	"153.6"	""	"749"	"32"	"35.000"	"28.000"	"0.0250871786226489"	"22"	"0"	"4.309E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLDYRPVIDK"	"[K].vTLDYRPVIDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.02545"	"1777.06180"	"1777.06239"	"-0.33"	"-0.00020"	"9/106"	"9"	"106"	"6718559.65203857"	"HCD"	"MS2"	"0"	"287.9"	"79.338"	"45.9318"	"13232"	"13232"	"13216"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.0"	""	"360.7"	""	"393.9"	""	"475.5"	"3.4"	"558.6"	"590.1"	""	"653"	"4"	"35.000"	"28.000"	"13.8001302557719"	"13"	"0.0007793"	"0.007295"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATSQVVAGTK"	"[K].kATSQVVAGTk.[Y]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"1"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"593.04254"	"1777.11307"	"1777.11504"	"-1.11"	"-0.00066"	"8/114"	"8"	"114"	"3804258.25408936"	"HCD"	"MS2"	"8.125102"	"177.8"	"100.000"	"28.1834"	"6026"	"6026"	"6001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"321.6"	""	"292.5"	""	"139.2"	""	"303.0"	"5.6"	"369.3"	"252.8"	""	"304"	"38"	"31.000"	"24.000"	"0.00239796912994301"	"22"	"0"	"1.451E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KATSQVVAGTK"	"[K].kATSQVVAGTk.[Y]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.04333"	"1777.11545"	"1777.11504"	"0.23"	"0.00014"	"8/114"	"8"	"114"	"4144663.74139404"	"HCD"	"MS2"	"8.383192"	"193.2"	"100.000"	"28.1019"	"5958"	"5958"	"5932"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.4"	""	"299.1"	""	"149.8"	""	"365.7"	"6.8"	"387.7"	"271.8"	""	"278"	"32"	"31.000"	"24.000"	"0.00810988694940504"	"15"	"0"	"7.825E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNSMEEILEGLK"	"[K].gNSMEEILEGLk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"593.32990"	"1777.97513"	"1777.97701"	"-1.05"	"-0.00062"	"10/120"	"10"	"120"	"3472788.03363037"	"HCD"	"MS2"	"0"	"102.5"	"100.000"	"69.7707"	"22882"	"22882"	"22858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.1"	""	"200.7"	""	"145.6"	""	"152.6"	"0.5"	"170.8"	"136.1"	""	"1127"	"29"	"37.000"	"30.000"	"0.078866745626967"	"17"	"0.0001308"	"0.0002494"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNSMEEILEGLK"	"[K].gNSMEEILEGLk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"593.32990"	"1777.97513"	"1777.97701"	"-1.05"	"-0.00062"	"10/120"	"10"	"120"	"3786830.06793213"	"HCD"	"MS2"	"17.87701"	"112.7"	"100.000"	"69.6582"	"22887"	"22887"	"22873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.6"	""	"238.7"	""	"146.2"	""	"170.7"	""	"196.0"	"140.7"	""	"1127"	"28"	"37.000"	"30.000"	"0.0903428777653838"	"17"	"0.0001889"	"0.0003802"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNSMEEILEGLK"	"[K].gNSMEEILEGLk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"889.49158"	"1777.97588"	"1777.97701"	"-0.64"	"-0.00056"	"9/120"	"9"	"120"	"450916.257507324"	"HCD"	"MS2"	"0"	"44.2"	"100.000"	"69.7476"	"22924"	"22924"	"22897"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.4"	""	"85.0"	""	"62.7"	""	"65.2"	"1.4"	"75.6"	"54.2"	""	"1124"	"48"	"37.000"	"30.000"	"0.000939152925242616"	"26"	"0"	"2.816E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNSMEEILEGLK"	"[K].gNSMEEILEGLk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.8354"	"0.0000"	"1"	"1"	"1"	"889.49170"	"1777.97612"	"1777.97701"	"-0.50"	"-0.00044"	"11/120"	"11"	"120"	"605698.09387207"	"HCD"	"MS2"	"0"	"60.6"	"100.000"	"69.8372"	"22909"	"22909"	"22885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.9"	""	"128.7"	""	"78.4"	""	"82.8"	"1.6"	"95.3"	"78.1"	""	"1121"	"79"	"37.000"	"30.000"	"7.57836671670392E-07"	"30"	"0"	"2.271E-06"	"1.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQLFQDEVAK"	"[K].lEQLFQDEVAk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"889.50256"	"1777.99785"	"1778.01002"	"-6.85"	"-0.00609"	"11/108"	"11"	"108"	"535141.151794434"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"65.5760"	"21230"	"21230"	"21203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.2"	""	"50.3"	""	"53.1"	""	"58.1"	""	"113.4"	"132.0"	""	"1075"	"13"	"37.000"	"30.000"	"2.58451149791729"	"21"	"0.0004166"	"0.002488"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQLFQDEVAK"	"[K].lEQLFQDEVAk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"889.50598"	"1778.00469"	"1778.01002"	"-3.00"	"-0.00267"	"13/108"	"13"	"108"	"567576.008666992"	"HCD"	"MS2"	"19.80057"	"51.9"	"100.000"	"65.5563"	"21169"	"21169"	"21145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.1"	""	"55.4"	""	"64.9"	""	"70.4"	""	"111.8"	"141.8"	""	"1063"	"22"	"37.000"	"30.000"	"0.347138888732131"	"26"	"0.0001889"	"0.0008608"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGALNSNDAFVLK"	"[K].aGALNSNDAFVLk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8795"	"0.0000"	"1"	"1"	"1"	"889.51318"	"1778.01909"	"1778.02125"	"-1.22"	"-0.00108"	"21/116"	"21"	"116"	"2125946.64007568"	"HCD"	"MS2"	"0"	"178.4"	"100.000"	"50.9819"	"15239"	"15239"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"253.1"	""	"233.5"	""	"243.7"	""	"288.7"	"2.2"	"309.9"	"358.9"	""	"983"	"83"	"36.000"	"29.000"	"2.55578032296223E-07"	"28"	"0"	"5.815E-07"	"1.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGALNSNDAFVLK"	"[K].aGALNSNDAFVLk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8804"	"0.0000"	"1"	"1"	"1"	"889.51398"	"1778.02068"	"1778.02125"	"-0.32"	"-0.00029"	"22/116"	"22"	"116"	"4794635.77636719"	"HCD"	"MS2"	"0"	"365.0"	"100.000"	"50.9819"	"15289"	"15289"	"15270"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"539.6"	""	"514.7"	""	"489.9"	""	"608.5"	"3.6"	"592.7"	"706.2"	""	"973"	"92"	"36.000"	"29.000"	"3.3502934217149E-08"	"29"	"0"	"5.659E-07"	"1.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGALNSNDAFVLK"	"[K].aGALNSNDAFVLk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"889.51447"	"1778.02165"	"1778.02125"	"0.22"	"0.00020"	"10/116"	"10"	"116"	"362908.945129395"	"HCD"	"MS2"	"12.98897"	"36.3"	"100.000"	"51.3222"	"15429"	"15429"	"15398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.2"	""	"50.7"	""	"45.8"	""	"64.8"	"1.5"	"56.0"	"70.4"	""	"958"	"64"	"36.000"	"29.000"	"1.80857079453274E-05"	"23"	"0"	"6.015E-06"	"1.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGALNSNDAFVLK"	"[K].aGALNSNDAFVLk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8608"	"0.0000"	"1"	"1"	"1"	"889.51447"	"1778.02165"	"1778.02125"	"0.22"	"0.00020"	"12/116"	"12"	"116"	"1669383.31115723"	"HCD"	"MS2"	"0"	"143.4"	"100.000"	"50.6828"	"15117"	"15117"	"15090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.8"	""	"196.4"	""	"207.9"	""	"252.7"	""	"219.3"	"263.4"	""	"958"	"79"	"36.000"	"29.000"	"5.83896017885011E-07"	"28"	"0"	"7.391E-07"	"1.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"593.34711"	"1778.02677"	"1778.02865"	"-1.06"	"-0.00063"	"11/118"	"11"	"118"	"9187364.70404053"	"HCD"	"MS2"	"6.004088"	"201.4"	"86.668"	"60.2325"	"19048"	"19048"	"19027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.5"	""	"305.4"	""	"301.2"	""	"297.0"	""	"358.7"	"365.6"	""	"937"	"40"	"36.000"	"29.000"	"0.00447414026551043"	"19"	"0"	"0.0001094"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"889.51715"	"1778.02703"	"1778.02865"	"-0.91"	"-0.00081"	"13/118"	"13"	"118"	"746711.613250732"	"HCD"	"MS2"	"0"	"58.1"	"100.000"	"60.1410"	"18957"	"18957"	"18937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.1"	""	"85.6"	""	"98.2"	""	"72.0"	"1.4"	"94.3"	"100.6"	""	"942"	"50"	"36.000"	"29.000"	"0.000440576072523497"	"18"	"0"	"3.806E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"889.51721"	"1778.02715"	"1778.02865"	"-0.84"	"-0.00075"	"14/118"	"14"	"118"	"2232482.86590576"	"HCD"	"MS2"	"0"	"130.9"	"100.000"	"59.6322"	"18803"	"18803"	"18773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.9"	""	"212.8"	""	"218.2"	""	"131.9"	"3.1"	"218.5"	"224.5"	""	"959"	"51"	"36.000"	"29.000"	"0.0003773884561588"	"19"	"0"	"6.003E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"889.51740"	"1778.02751"	"1778.02865"	"-0.64"	"-0.00057"	"9/118"	"9"	"118"	"3110639.24456787"	"HCD"	"MS2"	"17.54015"	"181.9"	"100.000"	"59.5010"	"18696"	"18696"	"18665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"295.0"	""	"305.2"	""	"308.2"	""	"194.7"	""	"305.1"	"311.7"	""	"954"	"43"	"36.000"	"29.000"	"0.00252068385096761"	"16"	"0.0001308"	"0.0002369"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.9818"	"0.0000"	"1"	"1"	"1"	"889.51746"	"1778.02764"	"1778.02865"	"-0.57"	"-0.00051"	"9/118"	"9"	"118"	"9455596.33288574"	"HCD"	"MS2"	"0"	"279.7"	"53.380"	"59.8251"	"18828"	"18828"	"18809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"488.9"	""	"482.7"	""	"472.1"	""	"236.0"	"0.6"	"458.8"	"505.2"	""	"948"	"55"	"36.000"	"29.000"	"0.000151278894331776"	"17"	"0"	"1.366E-05"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.9828"	"0.0000"	"1"	"1"	"1"	"889.51746"	"1778.02764"	"1778.02865"	"-0.57"	"-0.00051"	"9/118"	"9"	"118"	"8947430.81152344"	"HCD"	"MS2"	"1.011866"	"286.3"	"60.340"	"59.9562"	"18935"	"18935"	"18916"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"498.3"	""	"461.0"	""	"473.2"	""	"258.6"	"2.2"	"454.3"	"559.8"	""	"948"	"58"	"36.000"	"29.000"	"7.02713572359182E-05"	"17"	"0"	"4.619E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"593.34747"	"1778.02787"	"1778.02865"	"-0.44"	"-0.00026"	"13/118"	"13"	"118"	"11036453.1757813"	"HCD"	"MS2"	"14.54611"	"257.1"	"100.000"	"59.6068"	"18792"	"18792"	"18773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"338.2"	""	"363.7"	""	"385.3"	""	"399.6"	"5.3"	"512.5"	"431.9"	""	"926"	"64"	"36.000"	"29.000"	"2.03976901803534E-05"	"23"	"0"	"2.426E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"593.34766"	"1778.02842"	"1778.02865"	"-0.13"	"-0.00008"	"13/118"	"13"	"118"	"101294073.75293"	"HCD"	"MS2"	"3.946612"	"174.4"	"10.204"	"59.9147"	"18918"	"18918"	"18900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"304.3"	""	"300.3"	""	"310.3"	""	"145.9"	""	"288.1"	"300.7"	""	"927"	"62"	"36.000"	"29.000"	"3.25874020266157E-05"	"20"	"0"	"9.986E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"593.34772"	"1778.02860"	"1778.02865"	"-0.03"	"-0.00002"	"13/118"	"13"	"118"	"12430873.6997681"	"HCD"	"MS2"	"13.58517"	"285.5"	"100.000"	"59.4732"	"18684"	"18684"	"18665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"426.5"	""	"430.5"	""	"430.5"	""	"396.6"	""	"522.2"	"496.9"	""	"920"	"61"	"36.000"	"29.000"	"3.51364460445737E-05"	"20"	"0"	"2.202E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"889.51825"	"1778.02922"	"1778.02865"	"0.32"	"0.00029"	"13/118"	"13"	"118"	"808856.929382324"	"HCD"	"MS2"	"0"	"58.8"	"100.000"	"60.2646"	"19061"	"19061"	"19043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.7"	""	"86.4"	""	"86.7"	""	"68.7"	"0.0"	"106.2"	"110.1"	""	"915"	"49"	"36.000"	"29.000"	"0.000608682896224977"	"19"	"0"	"0.0001222"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"593.34821"	"1778.03006"	"1778.02865"	"0.80"	"0.00047"	"11/118"	"11"	"118"	"8803553.46142578"	"HCD"	"MS2"	"8.875365"	"234.1"	"100.000"	"60.0967"	"18939"	"18939"	"18921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.3"	""	"339.3"	""	"371.2"	""	"329.9"	""	"420.1"	"425.4"	""	"907"	"43"	"36.000"	"29.000"	"0.00229920286202578"	"20"	"0"	"9.997E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMNTFSVVPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"593.34961"	"1778.03427"	"1778.02865"	"3.16"	"0.00188"	"13/118"	"13"	"118"	"89859765.0605469"	"HCD"	"MS2"	"3.366266"	"207.7"	"13.800"	"59.7794"	"18810"	"18810"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.8"	""	"356.7"	""	"357.2"	""	"192.6"	""	"320.1"	"383.4"	""	"886"	"55"	"36.000"	"29.000"	"0.000127762595588509"	"19"	"0"	"6.708E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVYIAELLAHK"	"[K].yVYIAELLAHk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.35797"	"1778.05936"	"1778.06166"	"-1.30"	"-0.00077"	"10/80"	"10"	"80"	"900812.114990234"	"HCD"	"MS2"	"18.17233"	"27.9"	"100.000"	"70.1180"	"23075"	"23075"	"23050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.9"	""	"42.0"	""	"41.7"	""	"42.8"	""	"47.2"	"48.2"	""	"705"	"29"	"35.000"	"28.000"	"0.0427719569788904"	"14"	"0"	"0.0001441"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVYIAELLAHK"	"[K].yVYIAELLAHk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"593.35815"	"1778.05991"	"1778.06166"	"-0.99"	"-0.00058"	"8/80"	"8"	"80"	"2581900.72772217"	"HCD"	"MS2"	"0"	"73.1"	"100.000"	"69.9909"	"22971"	"22971"	"22953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.9"	""	"111.0"	""	"114.4"	""	"121.2"	""	"124.8"	"123.3"	""	"707"	"41"	"35.000"	"28.000"	"0.00302266083004736"	"21"	"0"	"4.405E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVYIAELLAHK"	"[K].yVYIAELLAHk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"593.35822"	"1778.06009"	"1778.06166"	"-0.88"	"-0.00052"	"8/80"	"8"	"80"	"2743647.48431396"	"HCD"	"MS2"	"22.73986"	"79.4"	"100.000"	"69.8164"	"22952"	"22952"	"22929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.6"	""	"124.1"	""	"124.7"	""	"142.0"	""	"130.8"	"127.5"	""	"707"	"32"	"35.000"	"28.000"	"0.0200165588675023"	"19"	"0"	"5.078E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFQEALAAAGDK"	"[K].eAFQEALAAAGDk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"593.66077"	"1778.96775"	"1778.96888"	"-0.64"	"-0.00038"	"12/136"	"12"	"136"	"7624998.97723389"	"HCD"	"MS2"	"29.15084"	"213.0"	"100.000"	"55.9890"	"17319"	"17319"	"17301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"274.7"	""	"210.8"	""	"240.2"	""	"447.1"	""	"425.4"	"426.7"	""	"1267"	"43"	"38.000"	"31.000"	"0.00312425604805452"	"26"	"0"	"9.099E-06"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFQEALAAAGDK"	"[K].eAFQEALAAAGDk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"889.98792"	"1778.96855"	"1778.96888"	"-0.19"	"-0.00017"	"12/136"	"12"	"136"	"1069542.14428711"	"HCD"	"MS2"	"0"	"86.1"	"100.000"	"56.0352"	"17338"	"17338"	"17317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.2"	""	"81.0"	""	"90.9"	""	"185.5"	"0.0"	"158.1"	"175.8"	""	"1266"	"85"	"38.000"	"31.000"	"2.23564946478309E-07"	""	"0"	"5.585E-07"	"1.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFQEALAAAGDK"	"[K].eAFQEALAAAGDk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"3"	"3"	"0.6750"	"0.0000"	"1"	"1"	"1"	"593.66144"	"1778.96976"	"1778.96888"	"0.49"	"0.00029"	"15/136"	"15"	"136"	"7422712.1953125"	"HCD"	"MS2"	"27.32765"	"210.4"	"100.000"	"55.7852"	"17182"	"17182"	"17163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.7"	""	"226.4"	""	"233.8"	""	"448.2"	"3.2"	"430.3"	"411.3"	""	"1265"	"40"	"38.000"	"31.000"	"0.0068086424762087"	"28"	"0"	"2.49E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFQEALAAAGDK"	"[K].eAFQEALAAAGDk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"889.98877"	"1778.97026"	"1778.96888"	"0.77"	"0.00069"	"9/136"	"9"	"136"	"1147025.68737793"	"HCD"	"MS2"	"0"	"94.8"	"100.000"	"55.7945"	"17186"	"17186"	"17163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.1"	""	"87.1"	""	"109.9"	""	"193.1"	""	"189.9"	"187.6"	""	"1251"	"46"	"37.000"	"30.000"	"0.00141002662720134"	"26"	"0"	"6.24E-06"	"1.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSYPIFFNFTK"	"[R].gSYPIFFNFTk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35293"	"Cytochrome P450 2F2 OS=Rattus norvegicus OX=10116 GN=Cyp2f2 PE=2 SV=1"	"O35293"	"Cytochrome P450 2F2 OS=Rattus norvegicus OX=10116 GN=Cyp2f2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.99738"	"1778.98747"	"1778.98816"	"-0.39"	"-0.00034"	"14/102"	"14"	"102"	"500609.132324219"	"HCD"	"MS2"	"0"	"43.9"	"100.000"	"73.0349"	"24266"	"24266"	"24239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.2"	""	"81.1"	""	"73.2"	""	"60.8"	""	"73.4"	"64.0"	""	"1249"	"32"	"37.000"	"30.000"	"0.0400435380577434"	"14"	"0"	"3.595E-05"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSYPIFFNFTK"	"[R].gSYPIFFNFTk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35293"	"Cytochrome P450 2F2 OS=Rattus norvegicus OX=10116 GN=Cyp2f2 PE=2 SV=1"	"O35293"	"Cytochrome P450 2F2 OS=Rattus norvegicus OX=10116 GN=Cyp2f2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.99829"	"1778.98931"	"1778.98816"	"0.64"	"0.00057"	"11/102"	"11"	"102"	"414852.039001465"	"HCD"	"MS2"	"0"	"39.7"	"100.000"	"73.0784"	"24232"	"24232"	"24209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.0"	""	"70.5"	""	"69.8"	""	"49.2"	"0.1"	"66.9"	"61.2"	""	"1210"	"26"	"37.000"	"30.000"	"0.154438428811005"	"14"	"0.0001859"	"0.0003146"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLIANATNPESK"	"[K].yLIANATNPESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"890.00494"	"1779.00261"	"1779.00527"	"-1.49"	"-0.00133"	"11/110"	"11"	"110"	"831593.225463867"	"HCD"	"MS2"	"0"	"62.6"	"100.000"	"41.4626"	"11418"	"11418"	"11389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.3"	""	"86.0"	""	"82.7"	""	"94.4"	""	"112.8"	"118.6"	""	"1114"	"72"	"37.000"	"30.000"	"3.70557148004371E-06"	"25"	"0"	"3.363E-06"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLIANATNPESK"	"[K].yLIANATNPESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"890.00549"	"1779.00371"	"1779.00527"	"-0.88"	"-0.00078"	"11/110"	"11"	"110"	"2300659.30047607"	"HCD"	"MS2"	"0"	"159.0"	"100.000"	"41.1990"	"11266"	"11266"	"11237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.5"	""	"197.1"	""	"216.9"	""	"269.9"	""	"312.2"	"303.8"	""	"1107"	"55"	"37.000"	"30.000"	"0.000192361265358814"	"25"	"0"	"5.524E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLIANATNPESK"	"[K].yLIANATNPESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"593.67365"	"1779.00638"	"1779.00527"	"0.62"	"0.00037"	"12/110"	"12"	"110"	"16856965.2619629"	"HCD"	"MS2"	"22.7008"	"583.9"	"100.000"	"41.3022"	"11352"	"11352"	"11325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"734.4"	""	"736.5"	""	"795.6"	""	"963.5"	""	"1119.4"	"1197.4"	""	"1126"	"38"	"37.000"	"30.000"	"0.00823205749219131"	"16"	"0"	"0.0001103"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLIANATNPESK"	"[K].yLIANATNPESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"593.67401"	"1779.00748"	"1779.00527"	"1.24"	"0.00074"	"13/110"	"13"	"110"	"17069870.086731"	"HCD"	"MS2"	"40.02254"	"547.9"	"100.000"	"41.1234"	"11235"	"11235"	"11205"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"746.0"	""	"706.8"	""	"786.6"	""	"865.2"	"2.7"	"1045.2"	"1041.6"	""	"1104"	"46"	"37.000"	"30.000"	"0.00145525492497561"	"21"	"0"	"7.47E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].iMnTFSVVPSPk.[V]"	"N-Term(TMT6plex); N3(Deamidated); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"593.67572"	"1779.01261"	"1779.01266"	"-0.03"	"-0.00002"	"11/118"	"11"	"118"	"3812241.19177246"	"HCD"	"MS2"	"15.51562"	"102.9"	"100.000"	"62.1045"	"19759"	"19759"	"19737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.3"	""	"127.6"	""	"145.5"	""	"157.8"	""	"197.0"	"198.4"	""	"1072"	"45"	"37.000"	"30.000"	"0.0017067298716452"	"22"	"0"	"0.0001207"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLMQLNLAHNILR"	"[K].nLMQLNLAHNILR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"593.67938"	"1779.02359"	"1779.02607"	"-1.39"	"-0.00083"	"11/122"	"11"	"122"	"8421566.10675049"	"HCD"	"MS2"	"32.55092"	"150.3"	"100.000"	"54.8628"	"16858"	"16858"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.8"	""	"166.1"	""	"172.8"	""	"271.7"	""	"302.6"	"352.0"	""	"932"	"55"	"36.000"	"29.000"	"0.000156093894647548"	"21"	"0"	"2.002E-06"	"1.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLMQLNLAHNILR"	"[K].nLMQLNLAHNILR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.9057"	"0.0000"	"1"	"1"	"1"	"593.67987"	"1779.02506"	"1779.02607"	"-0.57"	"-0.00034"	"11/122"	"11"	"122"	"7813557.62188721"	"HCD"	"MS2"	"33.96953"	"136.7"	"100.000"	"54.6660"	"16724"	"16724"	"16704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.0"	""	"146.3"	""	"166.7"	""	"250.2"	"0.6"	"303.4"	"286.1"	""	"914"	"53"	"36.000"	"29.000"	"0.000209370842228542"	"21"	"0"	"2.508E-06"	"1.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISKQEAQELFK"	"[R].ISkQEAQELFk.[N]"	"K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"1"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"593.68433"	"1779.03843"	"1779.04166"	"-1.82"	"-0.00108"	"5/108"	"5"	"108"	"16061605.9171143"	"HCD"	"MS2"	"20.71615"	"223.1"	"61.352"	"64.7667"	"20900"	"20900"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.3"	""	"179.5"	""	"217.8"	""	"434.2"	"0.4"	"544.7"	"558.8"	""	"767"	"14"	"35.000"	"28.000"	"1.62093413570859"	"19"	"0.004631"	"0.1346"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISKQEAQELFK"	"[R].iSKQEAQELFk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"1"	"3"	"3"	"0.6429"	"0.0000"	"1"	"2"	"2"	"593.68433"	"1779.03843"	"1779.04166"	"-1.82"	"-0.00108"	"5/108"	"5"	"108"	"16061605.9171143"	"HCD"	"MS2"	"20.71615"	"223.1"	"61.352"	"64.7667"	"20900"	"20900"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.3"	""	"179.5"	""	"217.8"	""	"434.2"	"0.4"	"544.7"	"558.8"	""	"767"	"14"	"35.000"	"28.000"	"1.62093413570859"	"19"	"0.004346"	"0.1205"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISKQEAQELFK"	"[R].iSKQEAQELFk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"1"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"890.02319"	"1779.03911"	"1779.04166"	"-1.43"	"-0.00127"	"5/108"	"5"	"108"	"4396745.09240723"	"HCD"	"MS2"	"0"	"340.5"	"100.000"	"64.7712"	"20901"	"20901"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"300.6"	""	"266.0"	""	"317.6"	""	"654.1"	"3.4"	"868.8"	"837.8"	""	"767"	"22"	"35.000"	"28.000"	"0.24703891332507"	""	"0.007318"	"0.2711"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGTLQFGELQK"	"[R].vTGTLQFGELQk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"593.68488"	"1779.04007"	"1779.04166"	"-0.89"	"-0.00053"	"11/114"	"11"	"114"	"2473227.91235352"	"HCD"	"MS2"	"23.24472"	"108.7"	"100.000"	"54.2265"	"16598"	"16598"	"16577"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.6"	""	"152.8"	""	"151.8"	""	"152.0"	""	"205.3"	"224.2"	""	"758"	"15"	"35.000"	"28.000"	"1.25787999412439"	"15"	"0.000523"	"0.00282"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISKQEAQELFK"	"[R].ISkQEAQELFk.[N]"	"K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"1"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"593.68494"	"1779.04026"	"1779.04166"	"-0.79"	"-0.00047"	"5/108"	"5"	"108"	"10652244.0406494"	"HCD"	"MS2"	"30.21479"	"231.0"	"100.000"	"64.7542"	"20842"	"20842"	"20825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.4"	""	"183.3"	""	"236.7"	""	"438.7"	"0.8"	"581.4"	"556.3"	""	"758"	"15"	"35.000"	"28.000"	"1.1340682972745"	"20"	"0.00738"	"0.2749"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISKQEAQELFK"	"[R].iSKQEAQELFk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"1"	"3"	"3"	"0.5333"	"0.0000"	"1"	"2"	"2"	"593.68494"	"1779.04026"	"1779.04166"	"-0.79"	"-0.00047"	"5/108"	"5"	"108"	"10652244.0406494"	"HCD"	"MS2"	"30.21479"	"231.0"	"100.000"	"64.7542"	"20842"	"20842"	"20825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.4"	""	"183.3"	""	"236.7"	""	"438.7"	"0.8"	"581.4"	"556.3"	""	"758"	"15"	"35.000"	"28.000"	"1.1340682972745"	"20"	"0.005916"	"0.1972"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISKQEAQELFK"	"[R].iSKQEAQELFk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"P63155"	"Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1"	"1"	"2"	"2"	"0.1053"	"0.0000"	"1"	"1"	"1"	"890.02521"	"1779.04314"	"1779.04166"	"0.83"	"0.00074"	"12/108"	"12"	"108"	"4374677.33300781"	"HCD"	"MS2"	"2.09843"	"344.9"	"100.000"	"64.7934"	"20858"	"20858"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"288.0"	""	"277.3"	""	"322.4"	""	"644.3"	"2.1"	"882.1"	"874.8"	""	"749"	"19"	"35.000"	"28.000"	"0.500555020946643"	""	"0.005574"	"0.1775"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDVNVFNTILTTR"	"[K].gTDVNVFNTILTTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9571"	"0.0000"	"1"	"1"	"1"	"890.49347"	"1779.97966"	"1779.98023"	"-0.32"	"-0.00028"	"17/144"	"17"	"144"	"5216107.3692627"	"HCD"	"MS2"	"0"	"247.7"	"100.000"	"64.5362"	"20805"	"20805"	"20787"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"321.5"	""	"301.5"	""	"315.1"	""	"435.5"	"8.7"	"487.9"	"479.2"	""	"1078"	"70"	"37.000"	"30.000"	"5.18309018048795E-06"	"20"	"0"	"2.521E-06"	"1.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDVNVFNTILTTR"	"[K].gTDVNVFNTILTTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9138"	"0.0000"	"1"	"1"	"1"	"593.99841"	"1779.98069"	"1779.98023"	"0.26"	"0.00015"	"9/144"	"9"	"144"	"14420694.069458"	"HCD"	"MS2"	"15.46931"	"63.2"	"60.332"	"64.6100"	"20836"	"20836"	"20819"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.3"	""	"82.4"	""	"81.1"	""	"97.5"	"3.9"	"127.3"	"118.6"	""	"1080"	"58"	"37.000"	"30.000"	"7.75164294010974E-05"	"22"	"0"	"9.114E-06"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDVNVFNTILTTR"	"[K].gTDVNVFNTILTTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9467"	"0.0000"	"1"	"1"	"1"	"890.49420"	"1779.98113"	"1779.98023"	"0.50"	"0.00045"	"10/144"	"10"	"144"	"4805089.70733643"	"HCD"	"MS2"	"0"	"226.6"	"100.000"	"64.5194"	"20746"	"20746"	"20729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.7"	""	"275.3"	""	"290.1"	""	"395.8"	"3.6"	"433.3"	"448.4"	""	"1102"	"75"	"37.000"	"30.000"	"1.87997294303683E-06"	"21"	"0"	"2.125E-06"	"1.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDVNVFNTILTTR"	"[K].gTDVNVFNTILTTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"593.99884"	"1779.98197"	"1779.98023"	"0.98"	"0.00058"	"10/144"	"10"	"144"	"11014582.1096802"	"HCD"	"MS2"	"16.18428"	"77.7"	"88.772"	"64.6366"	"20794"	"20794"	"20777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.2"	""	"97.1"	""	"99.7"	""	"133.5"	"1.0"	"159.5"	"160.2"	""	"1097"	"52"	"37.000"	"30.000"	"0.000327473854691234"	"24"	"0"	"1.559E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSQVLANGLDNK"	"[K].ySQVLANGLDNk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"890.50470"	"1780.00212"	"1780.00052"	"0.90"	"0.00080"	"15/122"	"15"	"122"	"265058.782165527"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"45.7295"	"13100"	"13100"	"13079"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.9"	""	"34.5"	""	"42.1"	""	"34.8"	""	"33.4"	"31.3"	""	"1036"	"52"	"37.000"	"30.000"	"0.000314289418726846"	"23"	"0"	"1.596E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLQDNWLEK"	"[R].yLLQDNWLEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"890.50543"	"1780.00359"	"1780.00454"	"-0.54"	"-0.00048"	"13/92"	"13"	"92"	"354648.79296875"	"HCD"	"MS2"	"0"	"35.6"	"100.000"	"67.6672"	"22024"	"22024"	"21999"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.4"	""	"32.3"	""	"45.6"	"2.4"	"53.6"	"0.5"	"62.2"	"94.5"	""	"1021"	"42"	"37.000"	"30.000"	"0.00325833509700275"	"24"	"0"	"9.448E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLQDNWLEK"	"[R].yLLQDNWLEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"594.00610"	"1780.00376"	"1780.00454"	"-0.44"	"-0.00026"	"9/92"	"9"	"92"	"1357444.76239014"	"HCD"	"MS2"	"9.443117"	"53.6"	"100.000"	"67.6560"	"22019"	"22019"	"21999"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.7"	""	"71.9"	""	"76.0"	""	"82.3"	""	"99.7"	"102.8"	""	"1013"	"22"	"37.000"	"30.000"	"0.30802037814767"	"15"	"0.0003839"	"0.001743"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLQDNWLEK"	"[R].yLLQDNWLEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"594.00629"	"1780.00431"	"1780.00454"	"-0.13"	"-0.00008"	"11/92"	"11"	"92"	"1243085.08630371"	"HCD"	"MS2"	"46.60925"	"46.9"	"100.000"	"67.5848"	"22041"	"22041"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.4"	""	"65.1"	""	"70.0"	""	"69.6"	""	"90.4"	"88.2"	""	"1010"	"29"	"37.000"	"30.000"	"0.0586531549989373"	"20"	"0.0001889"	"0.0005422"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLVGNAAQSLSK"	"[R].sFLVGNAAQSLSk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07872"	"Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus OX=10116 GN=Acox1 PE=1 SV=1"	"P07872"	"Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus OX=10116 GN=Acox1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.01733"	"1780.03745"	"1780.03690"	"0.31"	"0.00018"	"13/132"	"13"	"132"	"4190452.19482422"	"HCD"	"MS2"	"43.57508"	"193.3"	"100.000"	"51.3522"	"15441"	"15441"	"15414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.6"	""	"269.2"	""	"287.8"	""	"310.0"	"2.8"	"335.2"	"335.7"	""	"787"	"16"	"35.000"	"28.000"	"0.974865579678698"	"14"	"0.0001859"	"0.0003235"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGTAFDPFLGGK"	"[K].vLGTAFDPFLGGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"594.01794"	"1780.03928"	"1780.04093"	"-0.93"	"-0.00055"	"13/102"	"13"	"102"	"3691734.52728271"	"HCD"	"MS2"	"9.366152"	"100.4"	"100.000"	"75.6135"	"25318"	"25318"	"25295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.0"	""	"133.3"	""	"156.9"	""	"158.0"	"1.0"	"171.5"	"170.3"	""	"821"	"41"	"36.000"	"29.000"	"0.00332899514249002"	"25"	"0"	"2.846E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGTAFDPFLGGK"	"[K].vLGTAFDPFLGGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"890.52356"	"1780.03984"	"1780.04093"	"-0.61"	"-0.00054"	"14/102"	"14"	"102"	"443547.465515137"	"HCD"	"MS2"	"4.498631"	"37.4"	"100.000"	"75.8911"	"25379"	"25379"	"25361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.6"	""	"47.9"	""	"51.8"	""	"64.1"	""	"67.1"	"62.6"	""	"798"	"34"	"36.000"	"29.000"	"0.017138503427919"	"16"	"0"	"8.273E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGTAFDPFLGGK"	"[K].vLGTAFDPFLGGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"890.52356"	"1780.03984"	"1780.04093"	"-0.61"	"-0.00054"	"14/102"	"14"	"102"	"992539.350646973"	"HCD"	"MS2"	"0"	"72.1"	"100.000"	"75.5788"	"25304"	"25304"	"25279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.5"	""	"104.6"	""	"108.1"	""	"113.9"	""	"118.2"	"122.6"	""	"798"	"31"	"36.000"	"29.000"	"0.0319133867747805"	"20"	"0"	"0.0001763"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGTAFDPFLGGK"	"[K].vLGTAFDPFLGGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"3"	"3"	"0.5758"	"0.0000"	"1"	"1"	"1"	"594.01837"	"1780.04056"	"1780.04093"	"-0.21"	"-0.00012"	"9/102"	"9"	"102"	"1047887.04193115"	"HCD"	"MS2"	"19.08744"	"34.3"	"100.000"	"75.9444"	"25401"	"25401"	"25377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.5"	""	"49.4"	""	"53.6"	""	"56.2"	"0.6"	"62.6"	"59.5"	""	"794"	"33"	"35.000"	"28.000"	"0.0194442191289273"	""	"0"	"7.964E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGTAFDPFLGGK"	"[K].vLGTAFDPFLGGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"890.52393"	"1780.04057"	"1780.04093"	"-0.20"	"-0.00018"	"13/102"	"13"	"102"	"307019.542419434"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"75.8859"	"25429"	"25429"	"25407"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.8"	""	"23.9"	""	"40.3"	""	"44.3"	""	"44.0"	"45.1"	""	"794"	"38"	"35.000"	"28.000"	"0.00677314708434241"	"20"	"0"	"0.0001136"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGTAFDPFLGGK"	"[K].vLGTAFDPFLGGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"594.01849"	"1780.04093"	"1780.04093"	"0.00"	"0.00000"	"14/102"	"14"	"102"	"3551998.70959473"	"HCD"	"MS2"	"5.497936"	"101.0"	"100.000"	"75.6327"	"25274"	"25274"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.3"	""	"161.9"	""	"144.0"	""	"144.5"	""	"190.0"	"182.2"	""	"794"	"28"	"35.000"	"28.000"	"0.0591276347851234"	"25"	"0"	"0.0001558"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGTAFDPFLGGK"	"[K].vLGTAFDPFLGGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"890.52411"	"1780.04094"	"1780.04093"	"0.01"	"0.00001"	"19/102"	"19"	"102"	"737826.999145508"	"HCD"	"MS2"	"0"	"55.2"	"100.000"	"75.5957"	"25259"	"25259"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.0"	""	"77.8"	""	"78.6"	""	"82.7"	"0.7"	"98.9"	"86.2"	""	"782"	"59"	"35.000"	"28.000"	"5.07197094954727E-05"	"17"	"0"	"1.011E-05"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALRPLVKPK"	"[M].aALRPLVkPk.[I]"	"N-Term(TMT6plex); K8(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"4"	"4"	""	"0.0000"	"1"	"1"	"1"	"445.80850"	"1780.21218"	"1780.21397"	"-1.01"	"-0.00045"	"6/86"	"6"	"86"	"30017010.2711792"	"HCD"	"MS2"	"11.14945"	"1186.4"	"65.931"	"32.8926"	"7916"	"7916"	"7894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1833.8"	""	"1915.8"	""	"2077.3"	""	"1915.1"	"6.5"	"1888.9"	"1564.7"	""	"28"	"0"	"21.000"	"14.000"	"1.38716472284988"	"13"	"0.005603"	"0.1804"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSQTVATFLDELAR"	"[K].tSQTVATFLDELAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"890.98553"	"1780.96379"	"1780.96424"	"-0.25"	"-0.00023"	"8/146"	"8"	"146"	"353103.582885742"	"HCD"	"MS2"	"7.900002"	"26.3"	"100.000"	"76.3077"	"25545"	"25545"	"25521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.5"	""	"32.7"	""	"32.9"	""	"47.4"	""	"53.8"	"55.9"	""	"1102"	"29"	"37.000"	"30.000"	"0.0684150421483418"	"18"	"0"	"0.0001528"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSQTVATFLDELAR"	"[K].tSQTVATFLDELAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"890.98566"	"1780.96404"	"1780.96424"	"-0.12"	"-0.00010"	"10/146"	"10"	"146"	"360923.512695313"	"HCD"	"MS2"	"12.92819"	"24.2"	"100.000"	"76.3054"	"25595"	"25595"	"25567"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.5"	""	"28.6"	""	"29.9"	""	"43.3"	""	"42.4"	"54.3"	""	"1102"	"68"	"37.000"	"30.000"	"8.43629191386797E-06"	"21"	"0"	"2.326E-06"	"1.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWmk.[D]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"594.32764"	"1780.96836"	"1780.97080"	"-1.37"	"-0.00081"	"6/82"	"6"	"82"	"2114837.49749756"	"HCD"	"MS2"	"12.00784"	"65.0"	"100.000"	"68.7396"	"22512"	"22512"	"22490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.0"	""	"82.0"	""	"84.6"	""	"130.3"	""	"120.3"	"121.7"	""	"1111"	"25"	"37.000"	"30.000"	"0.185218372289977"	"24"	"0.0001889"	"0.0008666"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWmk.[D]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"594.32813"	"1780.96982"	"1780.97080"	"-0.55"	"-0.00033"	"7/82"	"7"	"82"	"2508107.51434326"	"HCD"	"MS2"	"21.02654"	"80.9"	"100.000"	"68.8612"	"22510"	"22510"	"22490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.8"	""	"110.8"	""	"110.4"	""	"161.3"	""	"144.4"	"137.8"	""	"1113"	"31"	"37.000"	"30.000"	"0.0434975873253406"	"17"	"0.0002277"	"0.001217"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWmk.[D]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"890.98859"	"1780.96990"	"1780.97080"	"-0.51"	"-0.00045"	"13/82"	"13"	"82"	"1035643.96368408"	"HCD"	"MS2"	"16.23261"	"75.0"	"100.000"	"68.4354"	"22388"	"22388"	"22362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.1"	""	"80.7"	""	"84.4"	""	"189.6"	"1.9"	"140.4"	"137.7"	""	"1114"	"25"	"37.000"	"30.000"	"0.170944524753388"	"14"	"0.0001889"	"0.0007674"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWmk.[D]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"890.98871"	"1780.97014"	"1780.97080"	"-0.37"	"-0.00033"	"12/82"	"12"	"82"	"323880.185424805"	"HCD"	"MS2"	"0"	"28.8"	"100.000"	"68.7510"	"22517"	"22517"	"22490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.5"	""	"28.6"	""	"42.4"	""	"62.1"	"1.2"	"61.4"	"46.4"	""	"1112"	"41"	"37.000"	"30.000"	"0.004306007595782"	"23"	"0.0004166"	"0.002325"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWmk.[D]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"594.32825"	"1780.97019"	"1780.97080"	"-0.34"	"-0.00020"	"7/82"	"7"	"82"	"3804017.26165771"	"HCD"	"MS2"	"19.34032"	"107.3"	"100.000"	"68.4285"	"22385"	"22385"	"22362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.0"	""	"112.5"	""	"146.8"	""	"253.8"	"0.3"	"206.8"	"191.0"	""	"1112"	"39"	"37.000"	"30.000"	"0.00638373413552267"	"24"	"0.0001308"	"0.0002281"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWmk.[D]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"890.98883"	"1780.97038"	"1780.97080"	"-0.23"	"-0.00021"	"12/82"	"12"	"82"	"236639.790649414"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"68.9071"	"22529"	"22529"	"22506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.8"	""	"19.5"	""	"31.7"	""	"53.0"	"1.8"	"45.9"	"44.0"	""	"1110"	"45"	"37.000"	"30.000"	"0.00191996354693498"	"22"	"0.0001889"	"0.001055"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWmk.[D]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"890.98907"	"1780.97087"	"1780.97080"	"0.04"	"0.00004"	"9/82"	"9"	"82"	"1226538.45214844"	"HCD"	"MS2"	"0"	"90.2"	"100.000"	"68.6071"	"22407"	"22407"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.9"	""	"93.4"	""	"113.4"	""	"253.5"	""	"162.0"	"138.0"	""	"1096"	"54"	"37.000"	"30.000"	"0.000209305460420345"	"24"	"0.0001308"	"0.0002455"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLNWMK"	"[K].eFEPLLNWmk.[D]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"594.32892"	"1780.97220"	"1780.97080"	"0.79"	"0.00047"	"7/82"	"7"	"82"	"3513797.89611816"	"HCD"	"MS2"	"21.55501"	"99.2"	"100.000"	"68.5657"	"22390"	"22390"	"22362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.5"	""	"114.1"	""	"133.8"	""	"248.6"	"0.5"	"172.8"	"164.8"	""	"1109"	"39"	"37.000"	"30.000"	"0.00652982512317288"	"24"	"0"	"0.0001601"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGLYFIRPLK"	"[K].eSGLYFIRPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"594.36206"	"1781.07163"	"1781.07256"	"-0.52"	"-0.00031"	"8/88"	"8"	"88"	"15188676.7075195"	"HCD"	"MS2"	"9.215741"	"725.5"	"100.000"	"50.9475"	"15275"	"15275"	"15254"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1382.4"	""	"1339.7"	""	"972.4"	""	"1230.9"	""	"1018.9"	"902.1"	""	"512"	"11"	"34.000"	"27.000"	"2.15893697987654"	"17"	"0.0001889"	"0.0004059"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGLYFIRPLK"	"[K].eSGLYFIRPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.36218"	"1781.07199"	"1781.07256"	"-0.32"	"-0.00019"	"6/88"	"6"	"88"	"3975818.39013672"	"HCD"	"MS2"	"28.05884"	"201.6"	"100.000"	"51.2833"	"15413"	"15413"	"15382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"316.1"	""	"302.8"	""	"271.8"	""	"346.3"	""	"343.9"	"328.9"	""	"502"	"1"	"33.000"	"27.000"	"21.9115813465416"	"13"	"0.0003839"	"0.00202"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGLYFIRPLK"	"[K].eSGLYFIRPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.36224"	"1781.07218"	"1781.07256"	"-0.22"	"-0.00013"	"8/88"	"8"	"88"	"4964428.25622559"	"HCD"	"MS2"	"28.21522"	"229.9"	"100.000"	"51.0670"	"15274"	"15274"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"390.9"	""	"366.1"	""	"311.3"	""	"405.7"	"0.5"	"351.2"	"345.6"	""	"502"	"10"	"33.000"	"27.000"	"2.71439921775783"	"13"	"0.0001859"	"0.0003166"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGLYFIRPLK"	"[K].eSGLYFIRPLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.36243"	"1781.07273"	"1781.07256"	"0.09"	"0.00005"	"10/88"	"10"	"88"	"15650551.6772461"	"HCD"	"MS2"	"18.60513"	"681.9"	"100.000"	"50.7426"	"15141"	"15141"	"15122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1317.2"	""	"1245.3"	""	"923.4"	""	"1150.0"	"4.2"	"925.4"	"862.8"	""	"491"	"27"	"33.000"	"26.000"	"0.0507050828251485"	"14"	"0"	"1.659E-05"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPQLSYLDGYDR"	"[R].lLPQLSYLDGYDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"891.48273"	"1781.95818"	"1781.96352"	"-3.00"	"-0.00267"	"7/126"	"7"	"126"	"325956.840270996"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"71.8002"	"23762"	"23762"	"23738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.3"	""	"19.8"	""	"21.4"	""	"36.0"	"1.3"	"49.1"	"46.1"	""	"1074"	"15"	"37.000"	"30.000"	"1.58115441734993"	"18"	"0.002981"	"0.05702"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDVNVFNTILTTR"	"[K].gTDVnVFnTILTTR.[S]"	"N-Term(TMT6plex); N5(Deamidated); N8(Deamidated)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"594.66064"	"1781.96738"	"1781.94826"	"10.73"	"0.00637"	"8/144"	"8"	"144"	"8731482.91174316"	"HCD"	"MS2"	"25.63859"	"183.6"	"100.000"	"64.4672"	"20777"	"20777"	"20755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"265.6"	""	"293.0"	""	"276.3"	""	"240.2"	"2.3"	"345.4"	"316.1"	""	"1053"	"22"	"37.000"	"30.000"	"0.359251322465589"	"20"	"0.004346"	"0.1205"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMLFSGTNIAAGK"	"[K].nMLFSGTNIAAGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.50122"	"1781.99516"	"1781.99841"	"-1.82"	"-0.00162"	"14/124"	"14"	"124"	"369980.813720703"	"HCD"	"MS2"	"0"	"39.7"	"100.000"	"51.9001"	"15615"	"15615"	"15586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.0"	""	"46.9"	""	"47.7"	""	"50.1"	""	"68.3"	"110.1"	""	"964"	"37"	"36.000"	"29.000"	"0.00914212254023773"	"15"	"0.0001308"	"0.0002112"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMLFSGTNIAAGK"	"[K].nMLFSGTNIAAGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"594.67053"	"1781.99704"	"1781.99841"	"-0.77"	"-0.00046"	"13/124"	"13"	"124"	"4574302.30358887"	"HCD"	"MS2"	"29.46086"	"158.2"	"100.000"	"51.9740"	"15695"	"15695"	"15670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.7"	""	"209.1"	""	"211.0"	""	"169.0"	"1.7"	"265.0"	"432.1"	""	"984"	"47"	"36.000"	"29.000"	"0.000963751579364947"	"17"	"0"	"0.0001173"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMLFSGTNIAAGK"	"[K].nMLFSGTNIAAGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.50293"	"1781.99858"	"1781.99841"	"0.10"	"0.00009"	"17/124"	"17"	"124"	"687962.340209961"	"HCD"	"MS2"	"12.97588"	"66.0"	"100.000"	"52.0223"	"15715"	"15715"	"15686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.0"	""	"80.1"	""	"87.2"	""	"61.0"	""	"114.6"	"205.8"	""	"974"	"31"	"36.000"	"29.000"	"0.0392219300863946"	"14"	"0"	"6.927E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMLFSGTNIAAGK"	"[K].nMLFSGTNIAAGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"594.67126"	"1781.99924"	"1781.99841"	"0.47"	"0.00028"	"13/124"	"13"	"124"	"4496414.47644043"	"HCD"	"MS2"	"15.43245"	"156.1"	"100.000"	"51.8128"	"15579"	"15579"	"15554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.4"	""	"205.4"	""	"226.6"	""	"179.2"	"1.1"	"265.5"	"404.3"	""	"994"	"48"	"36.000"	"29.000"	"0.000747061557146742"	"17"	"0"	"3.862E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].qIGENLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.54749"	"1782.08769"	"1782.08894"	"-0.70"	"-0.00062"	"14/120"	"14"	"120"	"1188349.24053955"	"HCD"	"MS2"	"0"	"81.9"	"100.000"	"52.7907"	"15979"	"15979"	"15954"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.7"	""	"109.8"	""	"113.8"	""	"131.5"	"0.4"	"152.1"	"158.3"	""	"388"	"34"	"32.000"	"25.000"	"0.00835221624353919"	"15"	"0"	"0.0001532"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].qIGENLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"891.54755"	"1782.08782"	"1782.08894"	"-0.63"	"-0.00056"	"15/120"	"15"	"120"	"1190340.85644531"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"52.9823"	"16107"	"16107"	"16086"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.6"	""	"99.1"	""	"106.5"	""	"131.7"	"2.6"	"137.0"	"142.1"	""	"388"	"58"	"32.000"	"25.000"	"3.1827441600071E-05"	"24"	"0"	"3.787E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].qIGENLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"594.70081"	"1782.08786"	"1782.08894"	"-0.60"	"-0.00036"	"14/120"	"14"	"120"	"10967125.4536133"	"HCD"	"MS2"	"7.54708"	"147.2"	"55.405"	"52.7744"	"15972"	"15972"	"15954"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.6"	""	"209.4"	""	"200.7"	""	"241.7"	"1.4"	"270.3"	"267.8"	""	"388"	"47"	"32.000"	"25.000"	"0.00039976220317438"	"18"	"0"	"1.495E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].qIGENLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"594.70123"	"1782.08915"	"1782.08894"	"0.12"	"0.00007"	"14/120"	"14"	"120"	"17706677.8445435"	"HCD"	"MS2"	"10.0068"	"374.0"	"100.000"	"52.4616"	"15844"	"15844"	"15826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"535.9"	""	"533.2"	""	"504.3"	""	"636.6"	"0.8"	"637.7"	"692.4"	""	"351"	"49"	"32.000"	"25.000"	"0.000203365426005225"	"18"	"0"	"3.604E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].qIGENLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8676"	"0.0000"	"1"	"1"	"1"	"891.54822"	"1782.08916"	"1782.08894"	"0.12"	"0.00011"	"11/120"	"11"	"120"	"5364086.33551025"	"HCD"	"MS2"	"0"	"290.3"	"100.000"	"52.6853"	"15986"	"15986"	"15958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"449.7"	""	"399.9"	""	"395.9"	""	"482.4"	"5.0"	"491.4"	"522.7"	""	"351"	"68"	"32.000"	"25.000"	"2.55433068642135E-06"	""	"0"	"1.519E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].qIGENLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"594.70129"	"1782.08933"	"1782.08894"	"0.22"	"0.00013"	"12/120"	"12"	"120"	"12504180.0631104"	"HCD"	"MS2"	"35.39674"	"289.0"	"100.000"	"52.6301"	"15963"	"15963"	"15942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"415.1"	""	"407.1"	""	"408.0"	""	"468.8"	""	"517.6"	"522.1"	""	"351"	"29"	"32.000"	"25.000"	"0.0220941409769876"	"16"	"0"	"0.0001102"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].qIGENLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8281"	"0.0000"	"1"	"1"	"1"	"891.54834"	"1782.08940"	"1782.08894"	"0.26"	"0.00023"	"10/120"	"10"	"120"	"5025670.71203613"	"HCD"	"MS2"	"0"	"279.5"	"100.000"	"52.4871"	"15855"	"15855"	"15826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"427.3"	""	"404.6"	""	"376.5"	""	"458.5"	"4.1"	"491.5"	"483.6"	""	"351"	"64"	"32.000"	"25.000"	"7.53836428972377E-06"	""	"0"	"1.811E-05"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].qIGENLIVPGGVk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"594.70160"	"1782.09024"	"1782.08894"	"0.73"	"0.00043"	"14/120"	"14"	"120"	"15227934.6794434"	"HCD"	"MS2"	"4.836748"	"164.2"	"45.987"	"52.9362"	"16088"	"16088"	"16070"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.9"	""	"205.3"	""	"215.5"	""	"294.3"	"3.0"	"288.5"	"316.2"	""	"356"	"52"	"32.000"	"25.000"	"0.000108747680433192"	"19"	"0"	"4.049E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPFGTLVYTIK"	"[K].eGPFGTLVYTIk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48032"	"Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1"	"P48032"	"Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.02307"	"1783.03887"	"1783.04059"	"-0.97"	"-0.00086"	"12/106"	"12"	"106"	"578698.909423828"	"HCD"	"MS2"	"0"	"55.9"	"100.000"	"68.1367"	"22215"	"22215"	"22186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.2"	""	"96.6"	""	"88.1"	""	"78.7"	"0.2"	"110.5"	"94.4"	""	"731"	"30"	"35.000"	"28.000"	"0.039984105187245"	"14"	"0"	"4.194E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALPLDTVTFYK"	"[K].gALPLDTVTFYk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"595.01788"	"1783.03910"	"1783.04059"	"-0.84"	"-0.00050"	"10/94"	"10"	"94"	"15940969.1601563"	"HCD"	"MS2"	"9.201954"	"241.7"	"59.130"	"64.9627"	"20980"	"20980"	"20963"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"325.4"	""	"319.7"	""	"350.5"	""	"452.8"	""	"397.9"	"441.8"	""	"729"	"45"	"35.000"	"28.000"	"0.00110077240208653"	"27"	"0"	"3.142E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALPLDTVTFYK"	"[K].gALPLDTVTFYk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"892.02350"	"1783.03972"	"1783.04059"	"-0.49"	"-0.00044"	"13/94"	"13"	"94"	"266949.568603516"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"65.3279"	"21076"	"21076"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.7"	""	"25.6"	""	"39.9"	""	"47.3"	""	"49.7"	"48.4"	""	"739"	"42"	"35.000"	"28.000"	"0.00238569237628305"	"22"	"0.0001308"	"0.0002519"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALPLDTVTFYK"	"[K].gALPLDTVTFYk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.8143"	"0.0000"	"1"	"1"	"1"	"892.02350"	"1783.03972"	"1783.04059"	"-0.49"	"-0.00044"	"10/94"	"10"	"94"	"5022250.69763184"	"HCD"	"MS2"	"0"	"345.3"	"100.000"	"64.9671"	"20981"	"20981"	"20963"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"463.8"	""	"459.1"	""	"486.3"	""	"629.3"	"7.1"	"583.1"	"640.7"	""	"739"	"70"	"35.000"	"28.000"	"3.86024121002085E-06"	""	"0"	"5.806E-06"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPFGTLVYTIK"	"[K].eGPFGTLVYTIk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48032"	"Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1"	"P48032"	"Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"595.01837"	"1783.04056"	"1783.04059"	"-0.02"	"-0.00001"	"8/106"	"8"	"106"	"3457175.57159424"	"HCD"	"MS2"	"38.29913"	"102.1"	"100.000"	"68.2037"	"22242"	"22242"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.8"	""	"151.1"	""	"146.0"	""	"171.8"	"3.2"	"172.9"	"185.0"	""	"733"	"29"	"35.000"	"28.000"	"0.0490991505941605"	"17"	"0"	"0.0001082"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPFGTLVYTIK"	"[K].eGPFGTLVYTIk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48032"	"Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1"	"P48032"	"Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.02435"	"1783.04143"	"1783.04059"	"0.47"	"0.00042"	"8/106"	"8"	"106"	"670262.54498291"	"HCD"	"MS2"	"0"	"67.8"	"100.000"	"68.0153"	"22217"	"22217"	"22186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.3"	""	"105.9"	""	"112.5"	""	"97.3"	""	"121.9"	"127.3"	""	"731"	"38"	"35.000"	"28.000"	"0.00641043323423163"	"15"	"0"	"4.067E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPFGTLVYTIK"	"[K].eGPFGTLVYTIk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48032"	"Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1"	"P48032"	"Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.01868"	"1783.04148"	"1783.04059"	"0.50"	"0.00029"	"11/106"	"11"	"106"	"6096901.19091797"	"HCD"	"MS2"	"22.37639"	"143.6"	"100.000"	"68.0363"	"22225"	"22225"	"22202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.4"	""	"207.0"	""	"205.7"	""	"216.3"	""	"256.7"	"255.1"	""	"731"	"3"	"35.000"	"28.000"	"19.6737605509703"	"13"	"0.0001889"	"0.0008095"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPFGTLVYTIK"	"[K].eGPFGTLVYTIk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48032"	"Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1"	"P48032"	"Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.02454"	"1783.04180"	"1783.04059"	"0.67"	"0.00060"	"8/106"	"8"	"106"	"421249.835693359"	"HCD"	"MS2"	"42.40914"	"34.5"	"100.000"	"68.5288"	"22375"	"22375"	"22346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.9"	""	"45.7"	""	"53.8"	""	"64.6"	""	"64.4"	"61.5"	""	"723"	"10"	"35.000"	"28.000"	"3.88247172561361"	"13"	"0.0001889"	"0.0009413"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALPLDTVTFYK"	"[K].gALPLDTVTFYk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"892.02490"	"1783.04253"	"1783.04059"	"1.09"	"0.00097"	"11/94"	"11"	"94"	"4754851.67016602"	"HCD"	"MS2"	"0"	"340.7"	"100.000"	"64.9962"	"20940"	"20940"	"20921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"481.7"	""	"421.2"	""	"484.4"	""	"640.8"	"2.2"	"575.0"	"620.2"	""	"702"	"68"	"35.000"	"28.000"	"5.67946093212716E-06"	""	"0"	"2.905E-06"	"1.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALPLDTVTFYK"	"[K].gALPLDTVTFYk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"3"	"3"	"0.7073"	"0.0000"	"1"	"1"	"1"	"595.01910"	"1783.04276"	"1783.04059"	"1.21"	"0.00072"	"12/94"	"12"	"94"	"12649768.7091675"	"HCD"	"MS2"	"9.346704"	"335.3"	"100.000"	"64.9939"	"20939"	"20939"	"20921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"453.2"	"6.3"	"430.5"	""	"466.6"	""	"629.9"	"0.2"	"586.7"	"602.0"	""	"701"	"41"	"35.000"	"28.000"	"0.00287533216287601"	"27"	"0"	"2.655E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAETVFNFQEK"	"[R].lAETVFNFQEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.50281"	"1783.99834"	"1783.99946"	"-0.63"	"-0.00056"	"10/102"	"10"	"102"	"504377.459716797"	"HCD"	"MS2"	"0"	"47.1"	"100.000"	"62.3698"	"19921"	"19921"	"19891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.0"	""	"52.1"	""	"65.6"	""	"84.0"	""	"97.2"	"96.1"	""	"958"	"65"	"36.000"	"29.000"	"1.53580300643812E-05"	"17"	"0"	"3.957E-06"	"1.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAETVFNFQEK"	"[R].lAETVFNFQEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.50305"	"1783.99883"	"1783.99946"	"-0.35"	"-0.00031"	"12/102"	"12"	"102"	"519459.422546387"	"HCD"	"MS2"	"0"	"54.1"	"100.000"	"62.2793"	"19831"	"19831"	"19801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.5"	""	"66.5"	""	"73.8"	""	"90.2"	""	"112.0"	"104.6"	""	"946"	"28"	"36.000"	"29.000"	"0.08334146699527"	"14"	"0.0001308"	"0.0002071"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAETVFNFQEK"	"[R].lAETVFNFQEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.33838"	"1784.00058"	"1783.99946"	"0.63"	"0.00038"	"13/102"	"13"	"102"	"2993460.79730225"	"HCD"	"MS2"	"10.32624"	"99.6"	"100.000"	"62.2355"	"19813"	"19813"	"19785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.2"	""	"122.8"	""	"135.7"	""	"168.1"	"1.0"	"197.5"	"188.0"	""	"918"	"40"	"36.000"	"29.000"	"0.0045689108656435"	"15"	"0"	"0.0001561"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAETVFNFQEK"	"[R].lAETVFNFQEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.33844"	"1784.00077"	"1783.99946"	"0.73"	"0.00044"	"8/102"	"8"	"102"	"3050733.96087646"	"HCD"	"MS2"	"7.620453"	"94.6"	"100.000"	"62.3584"	"19916"	"19916"	"19891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.4"	""	"125.6"	""	"131.9"	""	"161.1"	""	"184.3"	"174.3"	""	"919"	"46"	"36.000"	"29.000"	"0.00109467579617032"	"15"	"0"	"0.00013"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTQWGLDLLDK"	"[R].hTQWGLDLLDk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"595.34119"	"1784.00901"	"1784.01069"	"-0.94"	"-0.00056"	"15/112"	"15"	"112"	"6692265.75231934"	"HCD"	"MS2"	"41.79731"	"190.9"	"100.000"	"54.6336"	"16711"	"16711"	"16688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.3"	""	"246.7"	""	"262.5"	""	"330.0"	""	"342.0"	"357.2"	""	"890"	"33"	"36.000"	"29.000"	"0.0208142137872803"	"20"	"0"	"2.427E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTQWGLDLLDK"	"[R].hTQWGLDLLDk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"595.34210"	"1784.01175"	"1784.01069"	"0.60"	"0.00035"	"10/112"	"10"	"112"	"5506175.1673584"	"HCD"	"MS2"	"34.83763"	"171.6"	"100.000"	"54.7938"	"16830"	"16830"	"16805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.5"	""	"219.0"	""	"241.0"	""	"308.2"	""	"335.0"	"311.6"	""	"847"	"29"	"36.000"	"29.000"	"0.0541817982310712"	"21"	"0"	"3.557E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAALLTIPEAEK"	"[R].aVAALLTIPEAEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.54895"	"1784.09062"	"1784.09336"	"-1.53"	"-0.00137"	"12/106"	"12"	"106"	"400214.633422852"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"66.0089"	"21407"	"21407"	"21379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.0"	""	"43.0"	""	"46.6"	""	"50.6"	"0.9"	"55.8"	"56.8"	""	"360"	"28"	"32.000"	"25.000"	"0.0291254406775752"	"14"	"0.0001889"	"0.0004298"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAALLTIPEAEK"	"[R].aVAALLTIPEAEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.54919"	"1784.09111"	"1784.09336"	"-1.26"	"-0.00112"	"11/106"	"11"	"106"	"1994191.84869385"	"HCD"	"MS2"	"41.11706"	"102.5"	"100.000"	"65.6935"	"21278"	"21278"	"21251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.4"	""	"146.0"	""	"150.2"	""	"161.4"	"0.4"	"176.1"	"182.1"	""	"358"	"55"	"32.000"	"25.000"	"6.14968726740775E-05"	"16"	"0"	"2.429E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAALLTIPEAEK"	"[R].aVAALLTIPEAEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"595.36859"	"1784.09122"	"1784.09336"	"-1.20"	"-0.00071"	"14/106"	"14"	"106"	"2811180.77612305"	"HCD"	"MS2"	"9.370533"	"79.2"	"100.000"	"65.9929"	"21400"	"21400"	"21379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.1"	""	"111.0"	""	"104.4"	""	"133.7"	"3.2"	"150.7"	"147.0"	""	"356"	"52"	"32.000"	"25.000"	"0.00011814626653154"	"18"	"0"	"7.617E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAALLTIPEAEK"	"[R].aVAALLTIPEAEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"892.54950"	"1784.09172"	"1784.09336"	"-0.92"	"-0.00082"	"11/106"	"11"	"106"	"2033740.57373047"	"HCD"	"MS2"	"36.44148"	"104.4"	"100.000"	"65.7847"	"21262"	"21262"	"21241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.0"	""	"145.4"	""	"150.2"	""	"157.2"	"0.5"	"185.7"	"187.2"	""	"364"	"60"	"32.000"	"25.000"	"1.85810986034798E-05"	"21"	"0"	"1.757E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAALLTIPEAEK"	"[R].aVAALLTIPEAEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"595.36890"	"1784.09214"	"1784.09336"	"-0.68"	"-0.00041"	"14/106"	"14"	"106"	"9620695.21557617"	"HCD"	"MS2"	"22.11761"	"188.2"	"100.000"	"65.7435"	"21245"	"21245"	"21225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"299.7"	""	"246.8"	""	"273.1"	""	"308.9"	"1.0"	"320.8"	"330.6"	""	"362"	"54"	"32.000"	"25.000"	"6.66313442292982E-05"	"19"	"0"	"4.645E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAALLTIPEAEK"	"[R].aVAALLTIPEAEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.7609"	"0.0000"	"1"	"1"	"1"	"595.36902"	"1784.09250"	"1784.09336"	"-0.48"	"-0.00028"	"12/106"	"12"	"106"	"1867276.11828613"	"HCD"	"MS2"	"11.06931"	"62.8"	"100.000"	"66.1069"	"21394"	"21394"	"21369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.6"	""	"78.2"	""	"89.4"	""	"98.7"	"2.1"	"126.0"	"115.8"	""	"361"	"46"	"32.000"	"25.000"	"0.000472582032983527"	""	"0"	"9.707E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAALLTIPEAEK"	"[R].aVAALLTIPEAEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.9464"	"0.0000"	"1"	"1"	"1"	"595.36908"	"1784.09269"	"1784.09336"	"-0.38"	"-0.00022"	"14/106"	"14"	"106"	"9157851.1027832"	"HCD"	"MS2"	"21.15045"	"192.0"	"100.000"	"65.6683"	"21268"	"21268"	"21251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"285.6"	""	"260.7"	""	"271.0"	""	"318.9"	"3.5"	"340.4"	"337.7"	""	"354"	"56"	"32.000"	"25.000"	"4.64486682179046E-05"	"19"	"0"	"7.112E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALKPTVFPTVPR"	"[K].aLkPTVFPTVPR.[L]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.37750"	"1784.11795"	"1784.11985"	"-1.06"	"-0.00063"	"13/114"	"13"	"114"	"6915742.30352783"	"HCD"	"MS2"	"27.98495"	"361.6"	"100.000"	"43.2384"	"12088"	"12088"	"12076"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"456.9"	""	"488.0"	""	"516.4"	""	"617.1"	"2.4"	"673.0"	"673.3"	""	"240"	"16"	"30.000"	"23.000"	"0.271132292426517"	"14"	"0"	"0.0001092"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALKPTVFPTVPR"	"[K].aLkPTVFPTVPR.[L]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"595.37781"	"1784.11887"	"1784.11985"	"-0.55"	"-0.00033"	"8/114"	"8"	"114"	"4192958.96746826"	"HCD"	"MS2"	"46.23212"	"243.7"	"100.000"	"43.4429"	"12221"	"12221"	"12202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"326.6"	""	"345.3"	""	"358.9"	""	"391.8"	""	"450.6"	"438.3"	""	"240"	"14"	"30.000"	"23.000"	"0.497944851161235"	"16"	"0"	"0.0001518"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFGELALMYNTPR"	"[R].gSFGELALMYNTPR.[A]"	"N-Term(TMT6plex)"	"2"	"2"	"P12368; P12369"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4;cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12368; P12369"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4; cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.96283"	"1784.91838"	"1784.92027"	"-1.06"	"-0.00094"	"10/130"	"10"	"130"	"1765885.24755859"	"HCD"	"MS2"	"0"	"108.1"	"100.000"	"61.6552"	"19629"	"19629"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.7"	""	"154.0"	""	"163.1"	""	"130.8"	""	"200.9"	"209.5"	""	"919"	"62"	"36.000"	"29.000"	"2.60786746185227E-05"	"16"	"0"	"6.117E-07"	"1.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFGELALMYNTPR"	"[R].gSFGELALMYNTPR.[A]"	"N-Term(TMT6plex)"	"2"	"2"	"P12368; P12369"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4;cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12368; P12369"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4; cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"892.96344"	"1784.91960"	"1784.92027"	"-0.37"	"-0.00033"	"12/130"	"12"	"130"	"1357984.95605469"	"HCD"	"MS2"	"0"	"85.6"	"100.000"	"61.4826"	"19505"	"19505"	"19481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.8"	""	"134.6"	""	"121.1"	""	"100.2"	""	"163.9"	"168.4"	""	"945"	"49"	"36.000"	"29.000"	"0.000570692037087954"	"18"	"0"	"1.045E-06"	"1.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTAMDVVYALK"	"[K].tVTAmDVVYALk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K12(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.01648"	"1785.02568"	"1785.02323"	"1.37"	"0.00123"	"13/98"	"13"	"98"	"647402.356628418"	"HCD"	"MS2"	"9.934005"	"53.0"	"100.000"	"60.2444"	"19000"	"19000"	"18969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.1"	""	"41.7"	""	"47.1"	""	"81.5"	""	"141.0"	"148.4"	""	"732"	"28"	"35.000"	"28.000"	"0.0630203898444878"	"14"	"0.000523"	"0.002923"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVVDPLFGMQPIR"	"[R].lAVVDPLFGMQPIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.68097"	"1785.02835"	"1785.02943"	"-0.60"	"-0.00036"	"13/110"	"13"	"110"	"1556428.31768799"	"HCD"	"MS2"	"15.29515"	"17.4"	"100.000"	"78.8938"	"26645"	"26645"	"26623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.2"	""	"22.4"	""	"27.1"	""	"25.2"	""	"34.5"	"34.5"	""	"727"	"38"	"35.000"	"28.000"	"0.00590886972715301"	"15"	"0"	"0.0001204"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVVDPLFGMQPIR"	"[R].lAVVDPLFGMQPIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"893.01819"	"1785.02910"	"1785.02943"	"-0.18"	"-0.00016"	"8/110"	"8"	"110"	"608491.630493164"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"78.8592"	"26631"	"26631"	"26607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.4"	""	"48.6"	""	"41.4"	""	"21.6"	""	"45.8"	"49.5"	""	"721"	"33"	"35.000"	"28.000"	"0.0197653845853968"	"16"	"0.0001889"	"0.0007169"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVVDPLFGMQPIR"	"[R].lAVVDPLFGMQPIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"893.01880"	"1785.03032"	"1785.02943"	"0.50"	"0.00045"	"7/110"	"7"	"110"	"556017.990783691"	"HCD"	"MS2"	"9.818406"	"24.9"	"100.000"	"78.8991"	"26596"	"26596"	"26577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.1"	""	"41.2"	""	"41.4"	""	"25.7"	""	"47.0"	"43.4"	""	"733"	"35"	"35.000"	"28.000"	"0.0119694440491161"	"16"	"0.0001889"	"0.0009055"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVVDPLFGMQPIR"	"[R].lAVVDPLFGMQPIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.68164"	"1785.03037"	"1785.02943"	"0.53"	"0.00031"	"14/110"	"14"	"110"	"1513809.14160156"	"HCD"	"MS2"	"45.83422"	"15.2"	"100.000"	"78.9061"	"26599"	"26599"	"26577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.9"	""	"21.4"	""	"28.3"	""	"18.3"	"1.6"	"23.5"	"26.7"	""	"732"	"37"	"35.000"	"28.000"	"0.00675275643419686"	"15"	"0"	"5.004E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASLLPFPQDVINK"	"[R].lASLLPFPqDVINK.[L]"	"N-Term(TMT6plex); Q9(Deamidated)"	"1"	"1"	"P41738"	"Aryl hydrocarbon receptor OS=Rattus norvegicus OX=10116 GN=Ahr PE=1 SV=2"	"P41738"	"Aryl hydrocarbon receptor OS=Rattus norvegicus OX=10116 GN=Ahr PE=1 SV=2"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"595.68268"	"1785.03348"	"1785.03595"	"-1.38"	"-0.00082"	"8/128"	"8"	"128"	"721777.397094727"	"HCD"	"MS2"	"28.00778"	"45.2"	"100.000"	"76.3587"	"25566"	"25566"	"25537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.9"	""	"72.5"	""	"63.6"	""	"48.8"	""	"83.0"	"95.7"	""	"710"	"17"	"35.000"	"28.000"	"0.760726163397621"	"19"	"0.004819"	"0.1427"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIGDTSVSYK"	"[R].kIGDTSVSYk.[Y]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.69568"	"1785.07248"	"1785.07251"	"-0.02"	"-0.00001"	"7/98"	"7"	"98"	"4106016.49835205"	"HCD"	"MS2"	"36.65166"	"277.6"	"100.000"	"33.9098"	"8282"	"8282"	"8264"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.0"	""	"274.0"	""	"208.2"	""	"538.7"	""	"690.1"	"693.8"	""	"523"	"18"	"34.000"	"27.000"	"0.383240760409971"	"14"	"0"	"0.0001208"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLVIPSPVLVK"	"[R].dFLVIPSPVLVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"595.71423"	"1785.12815"	"1785.12901"	"-0.49"	"-0.00029"	"13/100"	"13"	"100"	"1544180.58624268"	"HCD"	"MS2"	"8.718088"	"34.9"	"100.000"	"79.7154"	"26980"	"26980"	"26959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.0"	""	"49.8"	""	"47.8"	""	"56.5"	"1.0"	"60.5"	"60.7"	""	"207"	"48"	"30.000"	"23.000"	"0.00015846755228409"	"16"	"0"	"0.0001139"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLVIPSPVLVK"	"[R].dFLVIPSPVLVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"595.71442"	"1785.12870"	"1785.12901"	"-0.18"	"-0.00011"	"12/100"	"12"	"100"	"1555419.12811279"	"HCD"	"MS2"	"2.85279"	"38.7"	"100.000"	"79.7737"	"26953"	"26953"	"26929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.4"	""	"63.8"	""	"57.5"	""	"53.7"	""	"70.1"	"69.7"	""	"206"	"45"	"30.000"	"23.000"	"0.000332534894536402"	"17"	"0.0001308"	"0.0002724"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLVVLPFPGK"	"[K].kLVVLPFPGk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.73682"	"1785.19590"	"1785.19692"	"-0.58"	"-0.00034"	"9/92"	"9"	"92"	"9540389.81304932"	"HCD"	"MS2"	"6.532574"	"274.4"	"100.000"	"56.1848"	"17399"	"17399"	"17381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"396.8"	""	"432.1"	""	"387.7"	""	"390.4"	""	"489.1"	"506.7"	""	"41"	"26"	"23.000"	"16.000"	"0.00551764634805018"	"14"	"0"	"0.000183"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLVVLPFPGK"	"[K].kLVVLPFPGk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.73730"	"1785.19736"	"1785.19692"	"0.24"	"0.00015"	"9/92"	"9"	"92"	"10161370.5565796"	"HCD"	"MS2"	"17.00922"	"267.4"	"100.000"	"55.9787"	"17261"	"17261"	"17243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.5"	""	"383.4"	""	"376.0"	""	"392.1"	""	"495.1"	"488.9"	""	"36"	"34"	"22.000"	"15.000"	"0.000655047065028973"	"15"	"0"	"0.000124"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLVVYNPFEQER"	"[R].yLVVYNPFEQER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"893.47205"	"1785.93682"	"1785.93730"	"-0.27"	"-0.00024"	"6/104"	"6"	"104"	"242938.882324219"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"67.8645"	"22104"	"22104"	"22074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.4"	""	"23.1"	""	"21.6"	""	"29.6"	""	"56.2"	"60.8"	""	"1015"	"18"	"37.000"	"30.000"	"0.826867736564659"	"21"	"0.0004557"	"0.002584"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFEGFVAMVNK"	"[R].gEFEGFVAMVNk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.99084"	"1785.95798"	"1785.96096"	"-1.67"	"-0.00099"	"8/94"	"8"	"94"	"2941671.92431641"	"HCD"	"MS2"	"13.15407"	"86.6"	"100.000"	"66.1501"	"21464"	"21464"	"21443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.4"	""	"121.5"	""	"111.2"	""	"119.9"	"1.2"	"177.2"	"171.3"	""	"1024"	"18"	"37.000"	"30.000"	"0.77672978813918"	"14"	"0"	"9.883E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFEGFVAMVNK"	"[R].gEFEGFVAMVNk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"595.99182"	"1785.96091"	"1785.96096"	"-0.03"	"-0.00002"	"9/94"	"9"	"94"	"2997048.78607178"	"HCD"	"MS2"	"33.61934"	"90.3"	"100.000"	"66.2315"	"21445"	"21445"	"21417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.0"	""	"118.2"	""	"121.8"	""	"129.1"	"0.3"	"181.9"	"184.4"	""	"1035"	"45"	"37.000"	"30.000"	"0.00169398809599799"	"17"	"0"	"3.891E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMNGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"596.00354"	"1785.99607"	"1785.99735"	"-0.72"	"-0.00043"	"13/98"	"13"	"98"	"1068620.35253906"	"HCD"	"MS2"	"14.64567"	"39.6"	"100.000"	"82.8893"	"28274"	"28274"	"28253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.7"	""	"51.1"	""	"82.4"	""	"61.7"	""	"66.4"	"68.5"	""	"1004"	"32"	"37.000"	"30.000"	"0.0315285296124285"	"19"	"0.0003839"	"0.001576"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMNGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"596.00366"	"1785.99643"	"1785.99735"	"-0.51"	"-0.00031"	"9/98"	"9"	"98"	"319046.278991699"	"HCD"	"MS2"	"10.83091"	"12.8"	"100.000"	"83.1940"	"28348"	"28348"	"28319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.8"	""	"12.4"	""	"22.6"	""	"23.6"	""	"23.4"	"23.3"	""	"1003"	"32"	"37.000"	"30.000"	"0.0292597719793283"	"16"	"0.0001889"	"0.00058"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMNGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.50189"	"1785.99651"	"1785.99735"	"-0.47"	"-0.00042"	"15/98"	"15"	"98"	"252298.661193848"	"HCD"	"MS2"	"21.63384"	"19.5"	"100.000"	"82.9769"	"28310"	"28310"	"28285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.1"	""	"26.9"	""	"35.2"	""	"25.6"	""	"32.0"	"36.0"	""	"1005"	"56"	"37.000"	"30.000"	"0.000119987516966387"	"16"	"0"	"4.955E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMNGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.50256"	"1785.99785"	"1785.99735"	"0.28"	"0.00025"	"11/98"	"11"	"98"	"232883.566467285"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"82.9430"	"28245"	"28245"	"28224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.3"	""	"26.7"	""	"38.9"	""	"31.4"	""	"34.1"	"44.3"	""	"1005"	"31"	"37.000"	"30.000"	"0.0439679347051787"	"14"	"7.476E-05"	"0.0002003"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMNGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9804"	"0.0000"	"1"	"1"	"1"	"596.00439"	"1785.99863"	"1785.99735"	"0.72"	"0.00043"	"14/98"	"14"	"98"	"1306113.89111328"	"HCD"	"MS2"	"39.90213"	"42.7"	"100.000"	"82.8668"	"28214"	"28214"	"28192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.6"	""	"58.7"	""	"78.1"	""	"68.4"	""	"63.5"	"75.6"	""	"1008"	"51"	"37.000"	"30.000"	"0.000400341430301038"	"17"	"0"	"4.947E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFAPILYVFK"	"[K].eTFAPILYVFk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"893.53021"	"1786.05315"	"1786.05552"	"-1.33"	"-0.00118"	"13/82"	"13"	"82"	"303507.323364258"	"HCD"	"MS2"	"26.28196"	"22.2"	"100.000"	"85.1892"	"29212"	"29212"	"29186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.3"	""	"35.0"	""	"35.4"	""	"36.3"	""	"31.8"	"30.5"	""	"716"	"47"	"35.000"	"28.000"	"0.000657480726918708"	"19"	"0"	"0.0001581"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFAPILYVFK"	"[K].eTFAPILYVFk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.02277"	"1786.05375"	"1786.05552"	"-0.99"	"-0.00059"	"10/82"	"10"	"82"	"363161.302246094"	"HCD"	"MS2"	"33.85203"	"14.3"	"100.000"	"85.6972"	"29415"	"29415"	"29390"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.7"	""	"16.3"	""	"21.2"	""	"17.1"	""	"38.3"	"19.3"	""	"715"	"20"	"35.000"	"28.000"	"0.346159333613396"	"14"	"0.0001889"	"0.0006836"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFAPILYVFK"	"[K].eTFAPILYVFk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.02301"	"1786.05448"	"1786.05552"	"-0.58"	"-0.00035"	"8/82"	"8"	"82"	"2256318.3414917"	"HCD"	"MS2"	"0"	"59.4"	"100.000"	"85.3626"	"29283"	"29283"	"29266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.1"	""	"88.6"	""	"95.7"	""	"99.4"	""	"93.2"	"99.2"	""	"706"	"26"	"35.000"	"28.000"	"0.0842897382868352"	"14"	"0.0001308"	"0.0002296"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFAPILYVFK"	"[K].eTFAPILYVFk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"893.53101"	"1786.05474"	"1786.05552"	"-0.44"	"-0.00039"	"15/82"	"15"	"82"	"564530.96484375"	"HCD"	"MS2"	"0"	"40.3"	"100.000"	"85.4855"	"29329"	"29329"	"29314"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.3"	""	"68.6"	""	"66.1"	""	"62.8"	""	"53.4"	"66.7"	""	"713"	"41"	"35.000"	"28.000"	"0.00303430710619147"	"22"	"0"	"5.838E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFAPILYVFK"	"[K].eTFAPILYVFk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"893.53119"	"1786.05510"	"1786.05552"	"-0.23"	"-0.00021"	"15/82"	"15"	"82"	"470516.953918457"	"HCD"	"MS2"	"0"	"35.1"	"100.000"	"85.4255"	"29257"	"29257"	"29243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.8"	""	"45.0"	""	"56.4"	""	"55.4"	""	"58.6"	"57.7"	""	"713"	"55"	"35.000"	"28.000"	"0.000115627073585043"	"19"	"0"	"3.975E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFAPILYVFK"	"[K].eTFAPILYVFk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.02362"	"1786.05631"	"1786.05552"	"0.44"	"0.00026"	"12/82"	"12"	"82"	"2603441.95568848"	"HCD"	"MS2"	"3.786004"	"69.2"	"100.000"	"85.3171"	"29213"	"29213"	"29195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.4"	""	"111.3"	""	"103.2"	""	"128.0"	"0.8"	"105.2"	"96.8"	""	"702"	"40"	"35.000"	"28.000"	"0.00360003826114244"	"15"	"0"	"3.377E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFAPILYVFK"	"[K].eTFAPILYVFk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.53192"	"1786.05657"	"1786.05552"	"0.59"	"0.00053"	"13/82"	"13"	"82"	"330107.899291992"	"HCD"	"MS2"	"14.95315"	"24.5"	"100.000"	"85.1394"	"29141"	"29141"	"29115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.9"	""	"42.4"	""	"28.0"	""	"42.1"	""	"38.1"	"38.5"	""	"697"	"49"	"35.000"	"28.000"	"0.000410395681772002"	"16"	"0"	"0.0001066"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSLILEAVPQVK"	"[K].mSLILEAVPQVk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z244"	"GMP reductase 1 OS=Rattus norvegicus OX=10116 GN=Gmpr PE=2 SV=1"	"Q9Z244"	"GMP reductase 1 OS=Rattus norvegicus OX=10116 GN=Gmpr PE=2 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"596.03503"	"1786.09055"	"1786.09125"	"-0.39"	"-0.00023"	"10/100"	"10"	"100"	"1450805.89019775"	"HCD"	"MS2"	"27.6111"	"38.4"	"100.000"	"75.0157"	"25074"	"25074"	"25055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.8"	""	"51.3"	""	"65.2"	""	"55.1"	"2.1"	"66.5"	"68.2"	""	"461"	"34"	"33.000"	"26.000"	"0.00956469068272206"	"17"	"0"	"4.273E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSLILEAVPQVK"	"[K].mSLILEAVPQVk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z244"	"GMP reductase 1 OS=Rattus norvegicus OX=10116 GN=Gmpr PE=2 SV=1"	"Q9Z244"	"GMP reductase 1 OS=Rattus norvegicus OX=10116 GN=Gmpr PE=2 SV=1"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"596.03558"	"1786.09220"	"1786.09125"	"0.53"	"0.00032"	"10/100"	"10"	"100"	"1294275.1060791"	"HCD"	"MS2"	"32.25522"	"33.7"	"100.000"	"75.0509"	"25037"	"25037"	"25009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.7"	""	"49.5"	""	"55.0"	""	"42.4"	""	"56.4"	"73.7"	""	"450"	"37"	"33.000"	"26.000"	"0.00458334467483786"	"20"	"0"	"6.48E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNTYSFVHAK"	"[R].fDNTYSFVHAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"596.32257"	"1786.95316"	"1786.95284"	"0.18"	"0.00011"	"8/104"	"8"	"104"	"95607167.3110352"	"HCD"	"MS2"	"4.410334"	"509.5"	"17.772"	"41.6921"	"11468"	"11468"	"11451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"728.0"	""	"718.2"	""	"725.3"	""	"839.5"	"3.8"	"881.8"	"927.5"	""	"1167"	"41"	"37.000"	"30.000"	"0.00494357196151038"	"23"	"0"	"4.876E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNTYSFVHAK"	"[R].fDNTYSFVHAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"596.32257"	"1786.95316"	"1786.95284"	"0.18"	"0.00011"	"9/104"	"9"	"104"	"92065524.3352051"	"HCD"	"MS2"	"5.070234"	"676.7"	"25.606"	"41.9259"	"11607"	"11607"	"11586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"960.8"	""	"946.6"	""	"974.6"	""	"1073.0"	"6.4"	"1225.5"	"1222.1"	""	"1167"	"55"	"37.000"	"30.000"	"0.000178665566355851"	"26"	"0"	"2.128E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYMDLMPFINK"	"[K].gYMDLMPFINk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"596.32532"	"1786.96140"	"1786.96361"	"-1.23"	"-0.00074"	"7/82"	"7"	"82"	"1436837.75762939"	"HCD"	"MS2"	"40.33713"	"40.2"	"100.000"	"76.7273"	"25712"	"25712"	"25699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.9"	""	"59.2"	""	"63.9"	""	"46.7"	"0.4"	"67.8"	"79.5"	""	"1140"	"23"	"37.000"	"30.000"	"0.318328010999994"	"16"	"0.0001889"	"0.0004941"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYMDLMPFINK"	"[K].gYMDLMPFINk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"596.32562"	"1786.96231"	"1786.96361"	"-0.72"	"-0.00043"	"10/82"	"10"	"82"	"1170716.0390625"	"HCD"	"MS2"	"33.3301"	"42.9"	"100.000"	"76.5655"	"25700"	"25700"	"25692"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.0"	""	"55.2"	""	"73.3"	""	"44.2"	"0.4"	"67.7"	"88.4"	""	"1138"	"32"	"37.000"	"30.000"	"0.0361503300223642"	"17"	"0.0001859"	"0.0003304"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNTYSFVHAK"	"[R].fDNTYSFVHAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"596.32764"	"1786.96836"	"1786.95284"	"8.68"	"0.00517"	"7/104"	"7"	"104"	"17539977.9655762"	"HCD"	"MS2"	"51.70408"	"353.4"	"49.675"	"42.2100"	"11722"	"11722"	"11712"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"517.5"	""	"567.5"	""	"509.1"	""	"467.1"	""	"661.7"	"625.9"	""	"1177"	"13"	"37.000"	"30.000"	"3.21178501252213"	"14"	"0.0006037"	"0.006115"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVYYNEATGGK"	"[R].iNVYYNEATGGk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"893.98907"	"1786.97087"	"1786.97397"	"-1.73"	"-0.00155"	"6/112"	"6"	"112"	"171876.567871094"	"HCD"	"MS2"	"100"	"15.4"	"100.000"	"44.7611"	"12758"	"12758"	"12734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.7"	""	"15.3"	""	"24.4"	""	"24.1"	""	"32.9"	"26.3"	""	"1196"	"30"	"37.000"	"30.000"	"0.0559372593140236"	"17"	"0.0001889"	"0.0003815"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVYYNEATGGK"	"[R].iNVYYNEATGGk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"596.32898"	"1786.97239"	"1786.97397"	"-0.89"	"-0.00053"	"11/112"	"11"	"112"	"6564558.27258301"	"HCD"	"MS2"	"0"	"203.5"	"100.000"	"44.4724"	"12641"	"12641"	"12620"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"294.2"	""	"258.7"	""	"294.6"	""	"303.6"	"1.9"	"392.7"	"383.4"	""	"1185"	"41"	"37.000"	"30.000"	"0.00486058290015417"	"18"	"0"	"2.539E-05"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVYYNEATGGK"	"[R].iNVYYNEATGGk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"893.98987"	"1786.97246"	"1786.97397"	"-0.85"	"-0.00076"	"11/112"	"11"	"112"	"1250335.47186279"	"HCD"	"MS2"	"0"	"99.5"	"100.000"	"44.4564"	"12635"	"12635"	"12604"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.5"	""	"127.0"	""	"132.8"	""	"148.1"	""	"198.8"	"175.1"	""	"1178"	"64"	"37.000"	"30.000"	"2.55337907370254E-05"	"18"	"0"	"3.081E-06"	"1.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVYYNEATGGK"	"[R].iNVYYNEATGGk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.9839"	"0.0000"	"1"	"1"	"1"	"893.99017"	"1786.97307"	"1786.97397"	"-0.50"	"-0.00045"	"11/112"	"11"	"112"	"1304928.92559814"	"HCD"	"MS2"	"0"	"111.7"	"100.000"	"44.2338"	"12494"	"12494"	"12470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.0"	""	"132.0"	""	"162.9"	""	"170.9"	""	"221.6"	"196.2"	""	"1189"	"62"	"37.000"	"30.000"	"4.02857876274547E-05"	"17"	"0"	"2.628E-06"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNTYSFVHAK"	"[R].fDNTYSFVHAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.32928"	"1786.97330"	"1786.95284"	"11.45"	"0.00682"	"8/104"	"8"	"104"	"12777182.5911865"	"HCD"	"MS2"	"6.46357"	"352.5"	"65.197"	"42.0469"	"11610"	"11610"	"11591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"565.7"	""	"580.3"	""	"514.4"	""	"421.0"	"1.5"	"648.0"	"605.1"	""	"1183"	"16"	"37.000"	"30.000"	"1.64041884190156"	"13"	"0.0009727"	"0.01049"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVYYNEATGGK"	"[R].iNVYYNEATGGk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"596.33008"	"1786.97568"	"1786.97397"	"0.96"	"0.00057"	"13/112"	"13"	"112"	"6009184.4677124"	"HCD"	"MS2"	"0"	"201.6"	"100.000"	"44.1719"	"12469"	"12469"	"12438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"307.2"	""	"254.1"	""	"288.4"	""	"304.8"	"1.3"	"391.6"	"363.0"	""	"1192"	"40"	"37.000"	"30.000"	"0.00596"	"17"	"0"	"3.475E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMnGk.[E]"	"N-Term(TMT6plex); N10(Deamidated); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"596.33051"	"1786.97696"	"1786.98136"	"-2.46"	"-0.00147"	"8/98"	"8"	"98"	"1115747.09204102"	"HCD"	"MS2"	"13.94885"	"39.1"	"100.000"	"81.5575"	"27731"	"27731"	"27710"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.8"	""	"41.5"	""	"59.2"	""	"73.0"	""	"78.0"	"75.1"	""	"1210"	"38"	"37.000"	"30.000"	"0.00858529800621901"	"19"	"0"	"8.809E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMnGk.[E]"	"N-Term(TMT6plex); N10(Deamidated); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"893.99402"	"1786.98076"	"1786.98136"	"-0.34"	"-0.00030"	"11/98"	"11"	"98"	"203504.699035645"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"81.5137"	"27663"	"27663"	"27632"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.7"	""	"15.6"	""	"27.0"	""	"24.8"	""	"21.3"	"26.7"	""	"1182"	"33"	"37.000"	"30.000"	"0.0270139120062391"	"16"	"0.0001889"	"0.000471"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMnGk.[E]"	"N-Term(TMT6plex); N10(Deamidated); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"596.33185"	"1786.98099"	"1786.98136"	"-0.21"	"-0.00012"	"7/98"	"7"	"98"	"857931.735778809"	"HCD"	"MS2"	"22.29181"	"34.7"	"100.000"	"81.5673"	"27684"	"27684"	"27664"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.7"	""	"37.1"	""	"56.8"	""	"69.9"	""	"68.9"	"60.7"	""	"1190"	"35"	"37.000"	"30.000"	"0.0173987066481678"	"22"	"7.476E-05"	"0.0001945"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMnGk.[E]"	"N-Term(TMT6plex); N10(Deamidated); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"596.33191"	"1786.98117"	"1786.98136"	"-0.11"	"-0.00006"	"13/98"	"13"	"98"	"711784.980957031"	"HCD"	"MS2"	"8.570266"	"26.0"	"100.000"	"86.1591"	"29601"	"29601"	"29586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.5"	""	"28.7"	""	"40.6"	""	"42.7"	"0.6"	"46.1"	"51.9"	""	"1189"	"42"	"37.000"	"30.000"	"0.00354121144327997"	"18"	"0"	"0.0001121"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMnGk.[E]"	"N-Term(TMT6plex); N10(Deamidated); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"596.33209"	"1786.98172"	"1786.98136"	"0.20"	"0.00012"	"7/98"	"7"	"98"	"407856.845458984"	"HCD"	"MS2"	"7.855676"	"17.9"	"100.000"	"86.0270"	"29496"	"29496"	"29480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.5"	""	"26.0"	""	"28.1"	""	"35.1"	""	"29.1"	"28.2"	""	"1185"	"36"	"37.000"	"30.000"	"0.0158740723245528"	"20"	"0.0001308"	"0.0002232"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMnGk.[E]"	"N-Term(TMT6plex); N10(Deamidated); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.99451"	"1786.98174"	"1786.98136"	"0.21"	"0.00019"	"8/98"	"8"	"98"	"170418.914978027"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"81.5343"	"27722"	"27722"	"27694"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.3"	""	"14.8"	""	"16.3"	""	"23.4"	""	"16.9"	"28.8"	""	"1185"	"47"	"37.000"	"30.000"	"0.0011606154690523"	"16"	"0"	"7.141E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMnGk.[E]"	"N-Term(TMT6plex); N10(Deamidated); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.99475"	"1786.98223"	"1786.98136"	"0.48"	"0.00043"	"11/98"	"11"	"98"	"156194.112243652"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"86.1315"	"29590"	"29590"	"29570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.4"	""	"14.9"	""	"18.9"	""	"17.4"	""	"16.6"	"22.2"	""	"1200"	"31"	"37.000"	"30.000"	"0.0431669386802219"	"15"	"0.0001889"	"0.0004992"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVFSLVDAMNGK"	"[R].fVFSLVDAMnGk.[E]"	"N-Term(TMT6plex); N10(Deamidated); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.99524"	"1786.98320"	"1786.98136"	"1.03"	"0.00092"	"11/98"	"11"	"98"	"146053.383056641"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"86.0451"	"29504"	"29504"	"29480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.9"	""	"12.7"	""	"17.6"	""	"16.1"	""	"17.1"	"24.3"	""	"1189"	"29"	"37.000"	"30.000"	"0.070008675125812"	"15"	"0.0001889"	"0.0006976"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGVSNFNPLQIER"	"[K].aIGVSNFNPLQIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"894.00262"	"1786.99797"	"1787.00130"	"-1.86"	"-0.00166"	"12/136"	"12"	"136"	"663161.040100098"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"61.4129"	"19530"	"19530"	"19507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.2"	""	"49.1"	""	"53.8"	""	"42.2"	"0.6"	"95.8"	"86.9"	""	"1120"	"63"	"37.000"	"30.000"	"2.87864444886158E-05"	"25"	"0"	"1.462E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGVSNFNPLQIER"	"[K].aIGVSNFNPLQIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"894.00299"	"1786.99870"	"1787.00130"	"-1.45"	"-0.00130"	"11/136"	"11"	"136"	"2113973.10247803"	"HCD"	"MS2"	"16.83642"	"97.4"	"100.000"	"60.9407"	"19284"	"19284"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.3"	""	"136.8"	""	"125.8"	""	"149.5"	"1.6"	"154.9"	"185.8"	""	"1118"	"61"	"37.000"	"30.000"	"4.02171978704068E-05"	"24"	"0"	"5.155E-06"	"1.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGVSNFNPLQIER"	"[K].aIGVSNFNPLQIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"596.33783"	"1786.99894"	"1787.00130"	"-1.32"	"-0.00079"	"16/136"	"16"	"136"	"7022756.60217285"	"HCD"	"MS2"	"39.75678"	"89.8"	"100.000"	"60.9361"	"19282"	"19282"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.3"	""	"127.8"	""	"117.7"	""	"155.4"	"0.4"	"158.7"	"160.9"	""	"1120"	"43"	"37.000"	"30.000"	"0.00278732767588204"	"16"	"0"	"2.423E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGVSNFNPLQIER"	"[K].aIGVSNFNPLQIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"596.33832"	"1787.00040"	"1787.00130"	"-0.50"	"-0.00030"	"8/136"	"8"	"136"	"4308700.30181885"	"HCD"	"MS2"	"17.56322"	"89.2"	"100.000"	"61.2354"	"19404"	"19404"	"19385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.2"	""	"125.1"	""	"107.9"	""	"136.8"	"3.3"	"160.0"	"156.1"	""	"1098"	"44"	"37.000"	"30.000"	"0.00245229292090879"	"16"	"0"	"1.757E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGVSNFNPLQIER"	"[K].aIGVSNFNPLQIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"894.00391"	"1787.00054"	"1787.00130"	"-0.43"	"-0.00038"	"12/136"	"12"	"136"	"806242.49230957"	"HCD"	"MS2"	"0"	"49.3"	"100.000"	"61.2448"	"19408"	"19408"	"19385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.7"	""	"67.2"	""	"57.1"	""	"67.8"	""	"105.0"	"103.8"	""	"1100"	"49"	"37.000"	"30.000"	"0.000622820199779555"	"23"	"0"	"1.174E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGVSNFNPLQIER"	"[K].aIGVSNFNPLQIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.9322"	"0.0000"	"1"	"1"	"1"	"596.33838"	"1787.00058"	"1787.00130"	"-0.40"	"-0.00024"	"17/136"	"17"	"136"	"8865796.96014404"	"HCD"	"MS2"	"29.84085"	"86.5"	"100.000"	"61.0994"	"19402"	"19402"	"19379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.2"	""	"117.7"	""	"107.2"	""	"130.2"	""	"152.4"	"169.1"	""	"1104"	"59"	"37.000"	"30.000"	"6.8224298326137E-05"	"20"	"0"	"7.368E-06"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGVSNFNPLQIER"	"[K].aIGVSNFNPLQIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"894.00409"	"1787.00090"	"1787.00130"	"-0.22"	"-0.00020"	"9/136"	"9"	"136"	"2332658.36828613"	"HCD"	"MS2"	"0"	"109.6"	"100.000"	"61.1017"	"19403"	"19403"	"19379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.1"	""	"152.7"	""	"147.9"	""	"165.4"	""	"193.0"	"208.9"	""	"1075"	"59"	"37.000"	"30.000"	"7.03685283612182E-05"	"25"	"0"	"4.094E-06"	"1.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFPVLDIDYLHVR"	"[K].aFPVLDIDYLHVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P26431"	"Sodium/hydrogen exchanger 1 OS=Rattus norvegicus OX=10116 GN=Slc9a1 PE=1 SV=2"	"P26431"	"Sodium/hydrogen exchanger 1 OS=Rattus norvegicus OX=10116 GN=Slc9a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.33972"	"1787.00461"	"1787.00532"	"-0.40"	"-0.00024"	"13/100"	"13"	"100"	"1268313.34466553"	"HCD"	"MS2"	"46.33827"	"49.3"	"100.000"	"68.7972"	"22536"	"22536"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.4"	""	"59.0"	""	"61.6"	""	"76.9"	"1.5"	"99.6"	"89.4"	""	"1055"	"34"	"37.000"	"30.000"	"0.0223471664591133"	"15"	"0"	"5.186E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAALYQPLFDK"	"[K].yAALYQPLFDk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"596.34259"	"1787.01322"	"1787.01438"	"-0.65"	"-0.00039"	"10/90"	"10"	"90"	"1862234.3258667"	"HCD"	"MS2"	"20.02208"	"66.3"	"100.000"	"66.3816"	"21506"	"21506"	"21481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.4"	""	"76.7"	""	"86.5"	""	"123.9"	""	"128.3"	"131.8"	""	"1007"	"31"	"37.000"	"30.000"	"0.044258783722435"	"29"	"0.0005959"	"0.003666"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAALYQPLFDK"	"[K].yAALYQPLFDk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.6571"	"0.0000"	"1"	"1"	"1"	"596.34283"	"1787.01395"	"1787.01438"	"-0.24"	"-0.00014"	"11/90"	"11"	"90"	"2459329.62731934"	"HCD"	"MS2"	"37.49544"	"78.6"	"100.000"	"66.3162"	"21532"	"21532"	"21507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.5"	""	"98.0"	""	"104.7"	""	"122.3"	"0.4"	"159.4"	"160.6"	""	"1003"	"35"	"37.000"	"30.000"	"0.0172294310871787"	"27"	"0.0001889"	"0.0006931"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVTHANALTVMGK"	"[R].sVTHANALTVMGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.34625"	"1787.02420"	"1787.02496"	"-0.42"	"-0.00025"	"8/126"	"8"	"126"	"13071219.6095581"	"HCD"	"MS2"	"10.98795"	"328.3"	"100.000"	"36.2899"	"9255"	"9255"	"9226"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"456.1"	""	"390.5"	""	"394.5"	""	"519.5"	""	"695.8"	"661.5"	""	"918"	"45"	"36.000"	"29.000"	"0.00155529467667894"	"15"	"0"	"1.334E-05"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVTHANALTVMGK"	"[R].sVTHANALTVMGk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.34644"	"1787.02475"	"1787.02496"	"-0.12"	"-0.00007"	"7/126"	"7"	"126"	"12982372.8486938"	"HCD"	"MS2"	"11.91299"	"307.9"	"100.000"	"36.3724"	"9332"	"9332"	"9305"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"434.6"	""	"357.1"	""	"366.7"	""	"471.4"	"0.2"	"673.5"	"620.1"	""	"903"	"48"	"36.000"	"29.000"	"0.000694476820096819"	"16"	"0"	"1.136E-05"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDKDR"	"[K].lPFPIIDDkDR.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"894.02625"	"1787.04521"	"1787.04674"	"-0.85"	"-0.00076"	"8/90"	"8"	"90"	"908929.078918457"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"57.4266"	"17907"	"17907"	"17877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.1"	""	"52.0"	""	"58.6"	""	"79.5"	"1.3"	"108.5"	"104.0"	""	"749"	"43"	"35.000"	"28.000"	"0.00187694618993414"	"20"	"0.00119"	"0.01618"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDKDR"	"[K].lPFPIIDDkDR.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.35364"	"1787.04636"	"1787.04674"	"-0.21"	"-0.00013"	"8/90"	"8"	"90"	"8851668.67962646"	"HCD"	"MS2"	"26.88015"	"322.9"	"100.000"	"57.2262"	"17825"	"17825"	"17797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"313.1"	""	"274.2"	""	"330.3"	""	"688.5"	""	"735.3"	"739.8"	""	"736"	"23"	"35.000"	"28.000"	"0.171335682416449"	"14"	"0"	"5.141E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDKDR"	"[K].lPFPIIDDkDR.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"596.35370"	"1787.04654"	"1787.04674"	"-0.11"	"-0.00007"	"9/90"	"9"	"90"	"4552265.13830566"	"HCD"	"MS2"	"9.758209"	"185.2"	"100.000"	"57.8346"	"18073"	"18073"	"18053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.2"	""	"165.7"	""	"211.3"	""	"329.2"	""	"431.3"	"451.4"	""	"737"	"38"	"35.000"	"28.000"	"0.00628691360347651"	"18"	"0"	"6.225E-06"	"1.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDKDR"	"[K].lPFPIIDDkDR.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"894.02698"	"1787.04668"	"1787.04674"	"-0.04"	"-0.00003"	"8/90"	"8"	"90"	"784799.893249512"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"57.3222"	"17810"	"17810"	"17787"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.7"	""	"44.2"	""	"48.0"	""	"72.7"	"1.6"	"95.6"	"98.3"	""	"736"	"34"	"35.000"	"28.000"	"0.0134229452468624"	"21"	"0.0001889"	"0.0006106"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDKDR"	"[K].lPFPIIDDkDR.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.35376"	"1787.04673"	"1787.04674"	"-0.01"	"-0.00001"	"9/90"	"9"	"90"	"3061868.68920898"	"HCD"	"MS2"	"1.62102"	"135.3"	"100.000"	"57.6724"	"17953"	"17953"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.2"	""	"140.7"	""	"153.6"	""	"257.3"	""	"294.4"	"308.7"	""	"736"	"18"	"35.000"	"28.000"	"0.589994303773935"	"14"	"0"	"0.0001683"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDKDR"	"[K].lPFPIIDDkDR.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"596.35388"	"1787.04709"	"1787.04674"	"0.20"	"0.00012"	"9/90"	"9"	"90"	"119939118.59082"	"HCD"	"MS2"	"3.263466"	"284.2"	"7.244"	"57.5120"	"17942"	"17942"	"17925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.9"	""	"199.4"	""	"285.6"	""	"565.2"	""	"666.8"	"726.4"	""	"692"	"38"	"35.000"	"28.000"	"0.0054084908435377"	"18"	"0"	"3.194E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDKDR"	"[K].lPFPIIDDkDR.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"596.35388"	"1787.04709"	"1787.04674"	"0.20"	"0.00012"	"9/90"	"9"	"90"	"12937076.0402222"	"HCD"	"MS2"	"13.74202"	"419.9"	"100.000"	"57.0477"	"17698"	"17698"	"17675"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"414.2"	""	"363.7"	""	"419.2"	""	"869.6"	"7.1"	"950.0"	"974.0"	""	"692"	"39"	"35.000"	"28.000"	"0.00466741157376712"	"21"	"0"	"1.563E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFPIIDDKDR"	"[K].lPFPIIDDkDR.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"596.35449"	"1787.04892"	"1787.04674"	"1.22"	"0.00073"	"9/90"	"9"	"90"	"90216166.1689453"	"HCD"	"MS2"	"3.267745"	"374.6"	"12.055"	"57.3453"	"17820"	"17820"	"17803"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"346.1"	""	"279.4"	""	"380.3"	""	"748.4"	"1.8"	"888.8"	"925.0"	""	"679"	"40"	"35.000"	"28.000"	"0.00349816087889929"	"22"	"0"	"3.692E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAIDNGLAFPLK"	"[K].vAAIDNGLAFPLk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q99M64"	"Phosphatidylinositol 4-kinase type 2-alpha OS=Rattus norvegicus OX=10116 GN=Pi4k2a PE=1 SV=1"	"Q99M64"	"Phosphatidylinositol 4-kinase type 2-alpha OS=Rattus norvegicus OX=10116 GN=Pi4k2a PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"596.36530"	"1787.08133"	"1787.08313"	"-1.00"	"-0.00060"	"12/110"	"12"	"110"	"1476921.38043213"	"HCD"	"MS2"	"30.45559"	"47.5"	"100.000"	"67.1481"	"21818"	"21818"	"21798"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.2"	""	"66.7"	""	"71.1"	""	"78.6"	"0.5"	"79.6"	"90.2"	""	"510"	"42"	"34.000"	"27.000"	"0.00160154881497396"	"16"	"0"	"2.863E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGDYFVFDPK"	"[K].eLGDYFVFDPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"596.65808"	"1787.95969"	"1787.96201"	"-1.30"	"-0.00077"	"9/96"	"9"	"96"	"2147930.2668457"	"HCD"	"MS2"	"19.58213"	"65.0"	"100.000"	"70.8518"	"23374"	"23374"	"23354"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.8"	""	"90.2"	""	"86.0"	""	"106.1"	"0.2"	"118.3"	"123.3"	""	"1222"	"30"	"37.000"	"30.000"	"0.0623794024545392"	"19"	"0.0001889"	"0.0004654"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGDYFVFDPK"	"[K].eLGDYFVFDPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.8382"	"0.0000"	"1"	"1"	"1"	"894.48389"	"1787.96050"	"1787.96201"	"-0.85"	"-0.00076"	"8/96"	"8"	"96"	"740403.791564941"	"HCD"	"MS2"	"0"	"58.3"	"100.000"	"70.7502"	"23333"	"23333"	"23306"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.3"	""	"86.9"	""	"93.9"	""	"76.8"	"0.5"	"99.7"	"99.3"	""	"1215"	"68"	"37.000"	"30.000"	"9.82983622868163E-06"	"28"	"0"	"0.0001054"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGDYFVFDPK"	"[K].eLGDYFVFDPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"894.48413"	"1787.96099"	"1787.96201"	"-0.57"	"-0.00051"	"9/96"	"9"	"96"	"800621.632751465"	"HCD"	"MS2"	"0"	"60.7"	"100.000"	"70.8600"	"23326"	"23326"	"23299"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.8"	""	"86.4"	""	"95.6"	"2.5"	"79.2"	"2.6"	"103.2"	"102.5"	""	"1251"	"55"	"37.000"	"30.000"	"0.000186306202660796"	"25"	"0"	"6.627E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGDYFVFDPK"	"[K].eLGDYFVFDPk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"596.65875"	"1787.96170"	"1787.96201"	"-0.17"	"-0.00010"	"9/96"	"9"	"96"	"3288889.35119629"	"HCD"	"MS2"	"6.176422"	"87.8"	"100.000"	"70.8834"	"23335"	"23335"	"23315"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.9"	""	"114.7"	""	"152.1"	""	"120.0"	"1.5"	"159.2"	"165.0"	""	"1247"	"23"	"37.000"	"30.000"	"0.312490240166604"	"19"	"0.0001889"	"0.001069"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYMDLMPFINK"	"[K].gYMDLMPFInk.[A]"	"N-Term(TMT6plex); N10(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"596.65991"	"1787.96518"	"1787.94762"	"9.82"	"0.00585"	"14/82"	"14"	"82"	"1191874.16992188"	"HCD"	"MS2"	"26.78612"	"42.7"	"100.000"	"76.7046"	"25703"	"25703"	"25695"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.6"	""	"63.3"	""	"72.3"	""	"48.3"	""	"71.6"	"83.1"	""	"1229"	"20"	"37.000"	"30.000"	"0.630263108681489"	"20"	"0.006001"	"0.206"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEHEYIHNFK"	"[K].lEHEYIHNFk.[VL]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"Q3B8Q0"	"Microtubule-associated protein RP/EB family member 2 OS=Rattus norvegicus OX=10116 GN=Mapre2 PE=1 SV=1"	"Q5XIT1; Q3B8Q0"	"Microtubule-associated protein RP/EB family member 3 OS=Rattus norvegicus OX=10116 GN=Mapre3 PE=1 SV=1; Microtubule-associated protein RP/EB family member 2 OS=Rattus norvegicus OX=10116 GN=Mapre2 PE=1 SV=1"	"0"	"4"	"4"	"0.0833"	"0.0000"	"1"	"1"	"1"	"447.75110"	"1787.98256"	"1787.98448"	"-1.07"	"-0.00048"	"9/80"	"9"	"80"	"3593298.92895508"	"HCD"	"MS2"	"36.86228"	"168.1"	"100.000"	"34.6184"	"8569"	"8569"	"8547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"233.6"	""	"225.4"	""	"248.3"	""	"245.1"	"3.6"	"329.8"	"307.9"	""	"1212"	"12"	"37.000"	"30.000"	"3.61803383669805"	"24"	"0.0001889"	"0.0006375"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GATTLPPPSVMMK"	"[K].gATTLPPPSVMMk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"596.67731"	"1788.01737"	"1788.01637"	"0.56"	"0.00033"	"7/108"	"7"	"108"	"6424749.32244873"	"HCD"	"MS2"	"11.3159"	"214.4"	"100.000"	"49.1983"	"14567"	"14567"	"14542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"291.9"	""	"278.4"	""	"331.4"	""	"317.5"	""	"392.2"	"421.8"	""	"973"	"19"	"36.000"	"29.000"	"0.662342838019684"	"17"	"0.0001308"	"0.0002588"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPVGGVFNLAMVLR"	"[K].lGPVGGVFNLAmVLR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"894.52289"	"1788.03850"	"1788.04033"	"-1.02"	"-0.00091"	"10/126"	"10"	"126"	"311162.616577148"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"83.9670"	"28714"	"28714"	"28693"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.0"	""	"14.1"	""	"19.1"	""	"52.3"	""	"17.6"	"25.8"	""	"760"	"49"	"35.000"	"28.000"	"0.000528181999861074"	"19"	"0.0001889"	"0.0004374"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPVGGVFNLAMVLR"	"[K].lGPVGGVFNLAmVLR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.68463"	"1788.03934"	"1788.04033"	"-0.55"	"-0.00033"	"17/126"	"17"	"126"	"994016.963195801"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"83.7807"	"28638"	"28638"	"28615"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"15.2"	""	"13.7"	""	"28.9"	""	"18.9"	"19.9"	""	"778"	"69"	"35.000"	"28.000"	"4.52845025440681E-06"	"17"	"0"	"2.94E-06"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPVGGVFNLAMVLR"	"[K].lGPVGGVFNLAmVLR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"894.52356"	"1788.03984"	"1788.04033"	"-0.27"	"-0.00024"	"8/126"	"8"	"126"	"194237.49810791"	"HCD"	"MS2"	"18.03388"	"9.0"	"100.000"	"83.9744"	"28666"	"28666"	"28644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	""	"8.4"	""	"9.8"	""	"30.8"	""	"12.6"	"16.4"	""	"769"	"38"	"35.000"	"28.000"	"0.00666647637136465"	"16"	"0.0005564"	"0.003591"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPVGGVFNLAMVLR"	"[K].lGPVGGVFNLAmVLR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"894.52380"	"1788.04033"	"1788.04033"	"0.00"	"0.00000"	"18/126"	"18"	"126"	"347139.156738281"	"HCD"	"MS2"	"15.44099"	"17.7"	"100.000"	"83.6476"	"28533"	"28533"	"28508"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.1"	""	"15.0"	""	"25.7"	""	"64.0"	""	"21.0"	"27.5"	""	"769"	"24"	"35.000"	"28.000"	"0.17135482750884"	"14"	"0.0006037"	"0.005618"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPVGGVFNLAMVLR"	"[K].lGPVGGVFNLAmVLR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"596.68518"	"1788.04099"	"1788.04033"	"0.37"	"0.00022"	"9/126"	"9"	"126"	"211223.922912598"	"HCD"	"MS2"	"13.17816"	"8.6"	"100.000"	"84.0206"	"28685"	"28685"	"28660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.3"	""	"11.7"	""	"14.4"	""	"15.7"	""	"14.5"	"16.5"	""	"770"	"18"	"35.000"	"28.000"	"0.670595646255771"	"14"	"0.0006737"	"0.006554"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPVGGVFNLAMVLR"	"[K].lGPVGGVFNLAmVLR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.68555"	"1788.04209"	"1788.04033"	"0.98"	"0.00059"	"18/126"	"18"	"126"	"706327.96697998"	"HCD"	"MS2"	"4.191981"	"12.2"	"100.000"	"83.6798"	"28546"	"28546"	"28524"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"16.7"	""	"18.1"	""	"28.9"	""	"17.4"	"25.2"	""	"761"	"55"	"35.000"	"28.000"	"0.000111008097882744"	"16"	"0"	"4.111E-06"	"1.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INTKALQSPK"	"[K].inTkALQSPk.[R]"	"N-Term(TMT6plex); N2(Deamidated); K4(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U2Y1"	"General transcription factor II-I OS=Rattus norvegicus OX=10116 GN=Gtf2i PE=1 SV=2"	"Q5U2Y1"	"General transcription factor II-I OS=Rattus norvegicus OX=10116 GN=Gtf2i PE=1 SV=2"	"1"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"596.71149"	"1788.11991"	"1788.11980"	"0.06"	"0.00004"	"7/98"	"7"	"98"	"12677587.0288086"	"HCD"	"MS2"	"31.91264"	"624.5"	"79.399"	"39.4320"	"10588"	"10588"	"10558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"750.1"	""	"481.5"	""	"459.6"	""	"1283.0"	"12.2"	"1546.7"	"1417.0"	""	"358"	"7"	"32.000"	"25.000"	"3.67158030009776"	"17"	"0.00955"	"0.4276"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQTALAELVK"	"[K].kQTALAELVk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"894.57910"	"1788.15093"	"1788.15618"	"-2.94"	"-0.00263"	"9/98"	"9"	"98"	"1023153.76257324"	"HCD"	"MS2"	"0"	"94.4"	"100.000"	"41.3432"	"11325"	"11325"	"11301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.7"	""	"148.6"	""	"125.8"	""	"126.6"	""	"175.2"	"151.7"	""	"183"	"45"	"29.000"	"22.000"	"0.000322419347003876"	"17"	"0.0001308"	"0.0002068"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISHLVLPVQPVK"	"[R].iSHLVLPVQPVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P752"	"Torsin-1A-interacting protein 2 OS=Rattus norvegicus OX=10116 GN=Tor1aip2 PE=2 SV=1"	"Q6P752"	"Torsin-1A-interacting protein 2 OS=Rattus norvegicus OX=10116 GN=Tor1aip2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.72205"	"1788.15158"	"1788.15115"	"0.24"	"0.00015"	"12/94"	"12"	"94"	"3338750.97943115"	"HCD"	"MS2"	"49.67363"	"142.6"	"100.000"	"49.4489"	"14666"	"14666"	"14638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.6"	""	"182.5"	""	"219.9"	""	"214.2"	"1.3"	"260.1"	"259.5"	""	"183"	"11"	"29.000"	"22.000"	"0.670534447822097"	"13"	"0.0001889"	"0.0008135"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQTALAELVK"	"[K].kQTALAELVk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.8085"	"0.0000"	"1"	"1"	"1"	"447.79407"	"1788.15444"	"1788.15618"	"-0.97"	"-0.00044"	"7/98"	"7"	"98"	"32471770.9001465"	"HCD"	"MS2"	"11.9405"	"976.8"	"100.000"	"41.0294"	"11196"	"11196"	"11173"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1719.7"	""	"1514.2"	""	"1295.6"	""	"1354.4"	"8.9"	"1755.0"	"1593.4"	""	"183"	"47"	"29.000"	"22.000"	"0.000178000447468474"	""	"0"	"0.0001489"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQTALAELVK"	"[K].kQTALAELVk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.7907"	"0.0000"	"1"	"1"	"1"	"447.79440"	"1788.15578"	"1788.15618"	"-0.22"	"-0.00010"	"7/98"	"7"	"98"	"45713568.9586182"	"HCD"	"MS2"	"10.05333"	"728.5"	"57.526"	"41.2562"	"11333"	"11333"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1249.1"	""	"1105.8"	""	"947.5"	""	"1062.2"	"4.1"	"1313.6"	"1210.9"	""	"160"	"43"	"29.000"	"22.000"	"0.000435602122273937"	""	"0.0001308"	"0.0002366"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQTALAELVK"	"[K].kQTALAELVk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"894.58154"	"1788.15581"	"1788.15618"	"-0.21"	"-0.00019"	"9/98"	"9"	"98"	"688759.080627441"	"HCD"	"MS2"	"0"	"62.7"	"100.000"	"41.5863"	"11468"	"11468"	"11447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.7"	""	"95.5"	""	"86.5"	""	"84.3"	""	"115.7"	"117.1"	""	"160"	"61"	"29.000"	"22.000"	"5.87611094525692E-06"	""	"0"	"3.122E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQTALAELVK"	"[K].kQTALAELVk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.72351"	"1788.15598"	"1788.15618"	"-0.11"	"-0.00007"	"9/98"	"9"	"98"	"719116256.691406"	"HCD"	"MS2"	"16.64924"	"385.9"	"1.209"	"41.1305"	"11238"	"11238"	"11221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"652.0"	""	"598.6"	""	"514.5"	""	"524.8"	""	"715.2"	"650.3"	""	"160"	"36"	"29.000"	"22.000"	"0.00222889693490382"	"15"	"0"	"0.0001695"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQTALAELVK"	"[K].kQTALAELVk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"596.72369"	"1788.15653"	"1788.15618"	"0.19"	"0.00012"	"16/98"	"16"	"98"	"801120147.703125"	"HCD"	"MS2"	"14.88139"	"509.2"	"1.427"	"41.3161"	"11358"	"11358"	"11341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"874.2"	""	"787.9"	""	"693.5"	""	"691.2"	""	"938.1"	"837.0"	""	"160"	"41"	"29.000"	"22.000"	"0.000698377094710489"	"17"	"0"	"0.0001321"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQTALAELVK"	"[K].kQTALAELVk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"894.58191"	"1788.15654"	"1788.15618"	"0.20"	"0.00018"	"9/98"	"9"	"98"	"7286116.87695313"	"HCD"	"MS2"	"0"	"555.1"	"100.000"	"41.2608"	"11335"	"11335"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1034.2"	""	"867.2"	""	"726.8"	""	"738.8"	"13.0"	"988.4"	"881.4"	""	"160"	"54"	"29.000"	"22.000"	"3.4362914141191E-05"	"17"	"0.0001308"	"0.0002767"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQTALAELVK"	"[K].kQTALAELVk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"894.58197"	"1788.15666"	"1788.15618"	"0.27"	"0.00024"	"9/98"	"9"	"98"	"6247780.3104248"	"HCD"	"MS2"	"0"	"483.2"	"100.000"	"41.0362"	"11199"	"11199"	"11173"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"860.1"	""	"761.6"	""	"634.7"	""	"687.5"	""	"868.8"	"764.3"	""	"160"	"40"	"29.000"	"22.000"	"0.000875165093017676"	"15"	"0.0001889"	"0.0006388"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMFEFWDWVGGR"	"[K].nmFEFWDWVGGR.[Y]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"894.92230"	"1788.83733"	"1788.83654"	"0.44"	"0.00039"	"10/116"	"10"	"116"	"139893.781005859"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"78.5648"	"26460"	"26460"	"26433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.4"	""	"8.3"	""	"9.1"	""	"25.7"	""	"17.3"	"16.8"	""	"463"	"16"	"33.000"	"26.000"	"0.652455648587722"	"23"	"0.00286"	"0.04877"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIPNASQPESK"	"[K].fLIPNASQPESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"3"	"3"	"0.1818"	"0.0000"	"1"	"1"	"1"	"597.01233"	"1789.02243"	"1789.02601"	"-2.00"	"-0.00119"	"7/110"	"7"	"110"	"4873729.4251709"	"HCD"	"MS2"	"13.28389"	"180.4"	"100.000"	"48.9279"	"14409"	"14409"	"14383"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"239.9"	""	"214.3"	""	"346.6"	""	"248.9"	"1.3"	"325.7"	"331.0"	""	"913"	"11"	"36.000"	"29.000"	"3.478890680766"	"22"	"0.0006037"	"0.005428"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIPNASQPESK"	"[K].fLIPNASQPESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"597.01318"	"1789.02500"	"1789.02601"	"-0.56"	"-0.00034"	"9/110"	"9"	"110"	"82374841.934082"	"HCD"	"MS2"	"22.69804"	"262.7"	"12.487"	"48.8281"	"14416"	"14416"	"14399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"387.1"	""	"284.6"	""	"329.4"	""	"448.9"	""	"519.0"	"525.3"	""	"938"	"28"	"36.000"	"29.000"	"0.0751922088233629"	"25"	"0.0001308"	"0.000215"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIPNASQPESK"	"[K].fLIPNASQPESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"3"	"3"	"0.6207"	"0.0000"	"1"	"1"	"1"	"597.01324"	"1789.02518"	"1789.02601"	"-0.46"	"-0.00028"	"9/110"	"9"	"110"	"78698606.512207"	"HCD"	"MS2"	"18.25513"	"241.6"	"11.909"	"48.5533"	"14256"	"14256"	"14239"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.8"	""	"271.3"	""	"298.9"	""	"424.5"	""	"476.0"	"493.0"	""	"941"	"29"	"36.000"	"29.000"	"0.058419741072223"	"26"	"0.0001308"	"0.00025"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIPNASQPESK"	"[K].fLIPNASQPESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"895.01666"	"1789.02605"	"1789.02601"	"0.02"	"0.00002"	"10/110"	"10"	"110"	"10720588.6511841"	"HCD"	"MS2"	"0"	"493.9"	"100.000"	"48.5186"	"14241"	"14241"	"14224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"731.2"	""	"574.7"	""	"702.1"	""	"854.4"	"10.4"	"878.4"	"927.0"	""	"930"	"62"	"36.000"	"29.000"	"2.72554246499024E-05"	"28"	"0"	"4.1E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIPNASQPESK"	"[K].fLIPNASQPESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"895.01685"	"1789.02641"	"1789.02601"	"0.23"	"0.00020"	"9/110"	"9"	"110"	"5814109.50402832"	"HCD"	"MS2"	"0"	"278.6"	"100.000"	"48.7315"	"14376"	"14376"	"14351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"404.5"	""	"349.2"	""	"358.7"	""	"501.2"	""	"511.4"	"520.0"	""	"896"	"33"	"36.000"	"29.000"	"0.0228180230233623"	"27"	"0"	"0.0001661"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIPNASQPESK"	"[K].fLIPNASQPESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"895.01764"	"1789.02800"	"1789.02601"	"1.12"	"0.00100"	"9/110"	"9"	"110"	"529872.147460938"	"HCD"	"MS2"	"0"	"31.9"	"100.000"	"49.2903"	"14605"	"14605"	"14574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.5"	""	"49.7"	""	"41.5"	""	"42.5"	"0.5"	"59.5"	"64.7"	""	"885"	"14"	"36.000"	"29.000"	"1.86171533060117"	"23"	"0.001966"	"0.03069"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGFLLMHTVLK"	"[K].dGGFLLMHTVLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"597.01947"	"1789.04386"	"1789.04463"	"-0.43"	"-0.00026"	"14/104"	"14"	"104"	"8061346.8918457"	"HCD"	"MS2"	"13.28656"	"244.5"	"100.000"	"59.2430"	"18590"	"18590"	"18569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"377.1"	""	"326.8"	""	"388.1"	""	"362.4"	"4.7"	"376.5"	"477.0"	""	"817"	"38"	"36.000"	"29.000"	"0.00696934655907776"	"25"	"0"	"3.061E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGFLLMHTVLK"	"[K].dGGFLLMHTVLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6452"	"0.0000"	"1"	"1"	"1"	"597.01947"	"1789.04386"	"1789.04463"	"-0.43"	"-0.00026"	"13/104"	"13"	"104"	"8805239.67169189"	"HCD"	"MS2"	"3.222994"	"253.3"	"100.000"	"59.3830"	"18701"	"18701"	"18677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"406.0"	""	"320.7"	""	"392.5"	""	"368.8"	""	"386.5"	"524.1"	""	"817"	"31"	"36.000"	"29.000"	"0.0354153926247231"	"25"	"0"	"4.232E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGFLLMHTVLK"	"[K].dGGFLLMHTVLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"597.01953"	"1789.04404"	"1789.04463"	"-0.33"	"-0.00020"	"7/104"	"7"	"104"	"6282925.98461914"	"HCD"	"MS2"	"10.73266"	"223.8"	"100.000"	"59.5542"	"18717"	"18717"	"18697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.9"	""	"297.0"	""	"327.0"	""	"346.4"	""	"380.4"	"456.2"	""	"812"	"26"	"36.000"	"29.000"	"0.0971686197100587"	"24"	"0"	"0.0001384"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSTVEALQNLK"	"[K].dLSTVEALQNLk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIE0"	"Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Rattus norvegicus OX=10116 GN=Anp32e PE=2 SV=1"	"Q5XIE0"	"Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Rattus norvegicus OX=10116 GN=Anp32e PE=2 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"597.01959"	"1789.04422"	"1789.04714"	"-1.63"	"-0.00097"	"8/104"	"8"	"104"	"2133497.83563232"	"HCD"	"MS2"	"29.71285"	"72.3"	"100.000"	"62.2499"	"19872"	"19872"	"19843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.3"	""	"97.4"	""	"92.8"	""	"107.5"	"1.0"	"147.6"	"133.7"	""	"813"	"16"	"36.000"	"29.000"	"0.963963411351461"	"19"	"0.0001889"	"0.0005049"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGFLLMHTVLK"	"[K].dGGFLLMHTVLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.0556"	"0.0000"	"1"	"1"	"1"	"597.01990"	"1789.04514"	"1789.04463"	"0.28"	"0.00017"	"8/104"	"8"	"104"	"5710975.39825439"	"HCD"	"MS2"	"5.638306"	"199.2"	"100.000"	"59.6828"	"18823"	"18823"	"18805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.6"	""	"289.1"	""	"297.6"	""	"287.8"	""	"341.3"	"410.0"	""	"801"	"18"	"36.000"	"29.000"	"0.640622990460174"	""	"0"	"0.0001632"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYLHTLAESIGK"	"[R].vYLHTLAESIGk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"597.02539"	"1789.06162"	"1789.06239"	"-0.43"	"-0.00026"	"8/96"	"8"	"96"	"3799822.1340332"	"HCD"	"MS2"	"13.98618"	"131.4"	"100.000"	"51.8655"	"15601"	"15601"	"15570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.4"	""	"195.6"	""	"191.6"	""	"218.5"	"0.5"	"231.0"	"224.9"	""	"722"	"45"	"35.000"	"28.000"	"0.00114949530534313"	"20"	"0"	"2.81E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYLHTLAESIGK"	"[R].vYLHTLAESIGk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"597.02545"	"1789.06180"	"1789.06239"	"-0.33"	"-0.00020"	"6/96"	"6"	"96"	"2900510.56951904"	"HCD"	"MS2"	"14.07356"	"130.0"	"100.000"	"52.0935"	"15744"	"15744"	"15718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.8"	""	"169.6"	""	"208.0"	""	"207.5"	"1.4"	"233.5"	"237.7"	""	"706"	"37"	"35.000"	"28.000"	"0.00649792516518541"	"17"	"0.0001308"	"0.0002404"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDFPQDQLATLTGR"	"[K].vDFPQDQLATLTGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"895.48560"	"1789.96391"	"1789.96458"	"-0.37"	"-0.00033"	"13/142"	"13"	"142"	"602601.357666016"	"HCD"	"MS2"	"0"	"37.3"	"100.000"	"60.6083"	"19202"	"19202"	"19171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.1"	""	"46.1"	""	"57.5"	""	"66.1"	""	"66.9"	"62.0"	""	"1085"	"61"	"37.000"	"30.000"	"3.86722768843637E-05"	"22"	"0"	"2.251E-06"	"1.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDFPQDQLATLTGR"	"[K].vDFPQDQLATLTGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"895.48566"	"1789.96404"	"1789.96458"	"-0.30"	"-0.00027"	"11/142"	"11"	"142"	"563204.010742188"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"60.4680"	"19091"	"19091"	"19065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.1"	""	"44.6"	""	"44.9"	""	"55.8"	""	"69.0"	"71.0"	""	"1074"	"39"	"37.000"	"30.000"	"0.00648596029452341"	"20"	"7.476E-05"	"0.0001984"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDFPQDQLATLTGR"	"[K].vDFPQDQLATLTGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"895.48669"	"1789.96611"	"1789.96458"	"0.86"	"0.00077"	"10/142"	"10"	"142"	"335123.111938477"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"60.9959"	"19360"	"19360"	"19331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.4"	""	"28.6"	""	"36.0"	""	"44.8"	"0.2"	"45.7"	"46.7"	""	"1093"	"38"	"37.000"	"30.000"	"0.00882246951305675"	"23"	"0"	"7.604E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDFPQDQLATLTGR"	"[K].vDFPQDQLATLTGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"895.48730"	"1789.96733"	"1789.96458"	"1.54"	"0.00138"	"8/142"	"8"	"142"	"361539.117126465"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"60.8278"	"19238"	"19238"	"19209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.2"	""	"28.5"	""	"31.9"	""	"34.8"	""	"45.0"	"47.6"	""	"1083"	"50"	"37.000"	"30.000"	"0.0005340703414693"	"27"	"0"	"2.979E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYTLVLTDPDAPSR"	"[K].lYTLVLTDPDAPSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"895.49725"	"1789.98723"	"1789.98973"	"-1.40"	"-0.00125"	"12/124"	"12"	"124"	"1558780.05108643"	"HCD"	"MS2"	"0"	"58.3"	"100.000"	"63.6483"	"20390"	"20390"	"20361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.9"	""	"85.1"	""	"81.7"	""	"86.5"	"0.0"	"108.7"	"100.7"	""	"1054"	"47"	"37.000"	"30.000"	"0.00111124703501484"	"19"	"0"	"5.153E-06"	"1.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYTLVLTDPDAPSR"	"[K].lYTLVLTDPDAPSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"895.49792"	"1789.98857"	"1789.98973"	"-0.65"	"-0.00058"	"6/124"	"6"	"124"	"1465014.98681641"	"HCD"	"MS2"	"24.09093"	"53.1"	"100.000"	"64.0318"	"20599"	"20599"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.0"	""	"75.1"	""	"82.1"	""	"73.8"	"0.7"	"88.9"	"103.4"	""	"1052"	"35"	"37.000"	"30.000"	"0.0174576484672673"	"19"	"0"	"7.309E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYTLVLTDPDAPSR"	"[K].lYTLVLTDPDAPSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"597.33453"	"1789.98905"	"1789.98973"	"-0.38"	"-0.00023"	"16/124"	"16"	"124"	"6624605.07928467"	"HCD"	"MS2"	"2.605551"	"56.3"	"100.000"	"63.9412"	"20509"	"20509"	"20489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.1"	""	"72.1"	""	"82.3"	""	"85.9"	"1.7"	"100.2"	"108.9"	""	"1068"	"66"	"37.000"	"30.000"	"1.42410252685447E-05"	"21"	"0"	"1.236E-05"	"1.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYTLVLTDPDAPSR"	"[K].lYTLVLTDPDAPSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"597.33484"	"1789.98996"	"1789.98973"	"0.13"	"0.00008"	"16/124"	"16"	"124"	"6996774.10638428"	"HCD"	"MS2"	"2.72883"	"58.6"	"100.000"	"63.9876"	"20581"	"20581"	"20563"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.6"	""	"79.1"	""	"85.5"	""	"89.5"	"3.6"	"99.6"	"107.7"	""	"1050"	"58"	"37.000"	"30.000"	"9.29307203116646E-05"	"20"	"0"	"1.041E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYTLVLTDPDAPSR"	"[K].lYTLVLTDPDAPSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"597.33502"	"1789.99051"	"1789.98973"	"0.44"	"0.00026"	"15/124"	"15"	"124"	"5487858.78649902"	"HCD"	"MS2"	"28.60577"	"74.5"	"100.000"	"63.6391"	"20386"	"20386"	"20361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.2"	""	"98.0"	""	"108.7"	""	"139.3"	"1.4"	"132.9"	"134.8"	""	"1064"	"54"	"37.000"	"30.000"	"0.000223311779483216"	"16"	"0"	"7.959E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYTLVLTDPDAPSR"	"[K].lYTLVLTDPDAPSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"895.49902"	"1789.99077"	"1789.98973"	"0.58"	"0.00052"	"10/124"	"10"	"124"	"1551165.88397217"	"HCD"	"MS2"	"23.2721"	"65.5"	"100.000"	"63.9776"	"20524"	"20524"	"20505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.6"	""	"82.7"	""	"99.9"	""	"103.6"	""	"124.4"	"123.2"	""	"1064"	"42"	"37.000"	"30.000"	"0.00308256066499101"	"18"	"0"	"7.319E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYTLVLTDPDAPSR"	"[K].lYTLVLTDPDAPSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"895.49927"	"1789.99126"	"1789.98973"	"0.85"	"0.00076"	"12/124"	"12"	"124"	"2026406.71173096"	"HCD"	"MS2"	"7.274132"	"73.0"	"100.000"	"63.7250"	"20474"	"20474"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.7"	""	"91.1"	""	"121.1"	""	"123.5"	""	"126.6"	"129.1"	""	"1057"	"43"	"37.000"	"30.000"	"0.0025765880701964"	"24"	"0"	"1.125E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYTLVLTDPDAPSR"	"[K].lYTLVLTDPDAPSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"597.33533"	"1789.99143"	"1789.98973"	"0.95"	"0.00057"	"15/124"	"15"	"124"	"4971285.90338135"	"HCD"	"MS2"	"33.20714"	"59.7"	"100.000"	"63.6950"	"20462"	"20462"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.7"	""	"83.9"	""	"81.9"	""	"100.1"	""	"114.0"	"116.6"	""	"1051"	"42"	"37.000"	"30.000"	"0.00313020456424495"	"15"	"0"	"3.752E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDK"	"[K].eGIPALDNFLDk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6727"	"0.0000"	"1"	"1"	"1"	"895.50720"	"1790.00713"	"1790.01002"	"-1.62"	"-0.00145"	"18/116"	"18"	"116"	"497397.921386719"	"HCD"	"MS2"	"0"	"41.6"	"100.000"	"72.2467"	"23944"	"23944"	"23919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.9"	""	"35.0"	""	"42.9"	""	"82.7"	"2.4"	"111.5"	"89.0"	""	"1036"	"55"	"37.000"	"30.000"	"0.000156073712052841"	""	"0"	"5.967E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDK"	"[K].eGIPALDNFLDk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"895.50848"	"1790.00969"	"1790.01002"	"-0.18"	"-0.00017"	"3/116"	"3"	"116"	"144080.830993652"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"72.6524"	"24110"	"24110"	"24079"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.8"	""	"11.3"	""	"16.8"	""	"24.0"	""	"27.9"	"21.3"	""	"1033"	"1"	"37.000"	"30.000"	"39.634220925538"	"13"	"0.00175"	"0.02395"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDK"	"[K].eGIPALDNFLDk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"895.50879"	"1790.01030"	"1790.01002"	"0.16"	"0.00014"	"17/116"	"17"	"116"	"533236.698303223"	"HCD"	"MS2"	"14.01164"	"42.4"	"100.000"	"72.3336"	"23928"	"23928"	"23905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.3"	""	"29.9"	""	"38.1"	""	"79.3"	"1.5"	"105.6"	"99.3"	""	"1012"	"57"	"37.000"	"30.000"	"9.77575968410563E-05"	"22"	"0"	"0.0001018"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDK"	"[K].eGIPALDNFLDk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"597.34192"	"1790.01120"	"1790.01002"	"0.66"	"0.00039"	"11/116"	"11"	"116"	"951649.76184082"	"HCD"	"MS2"	"32.12574"	"42.8"	"100.000"	"72.5741"	"24078"	"24078"	"24047"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.5"	""	"47.1"	""	"57.9"	""	"68.2"	"1.2"	"84.6"	"99.1"	""	"1016"	"16"	"37.000"	"30.000"	"1.22705410389803"	"17"	"0"	"0.0001579"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILNVPQDLYEK"	"[R].iLNVPQDLYEk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"895.51910"	"1790.03093"	"1790.04641"	"-8.65"	"-0.00774"	"6/102"	"6"	"102"	"847047.307556152"	"HCD"	"MS2"	"0"	"59.3"	"100.000"	"61.6621"	"19632"	"19632"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.3"	""	"80.8"	""	"81.2"	""	"63.8"	"2.2"	"106.4"	"140.1"	""	"899"	"5"	"36.000"	"29.000"	"14.3790335180628"	"13"	"0.002829"	"0.04846"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVENIKDPLFR"	"[R].tVENIkDPLFR.[F]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"1"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"597.35693"	"1790.05625"	"1790.05764"	"-0.78"	"-0.00046"	"8/106"	"8"	"106"	"11227646.3366699"	"HCD"	"MS2"	"16.84883"	"520.8"	"87.055"	"43.8344"	"12380"	"12380"	"12359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"711.0"	""	"681.3"	""	"687.2"	""	"892.8"	"7.0"	"965.4"	"991.7"	""	"802"	"12"	"36.000"	"29.000"	"2.81932000273417"	"14"	"0.0001889"	"0.0004655"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVENIKDPLFR"	"[R].tVENIkDPLFR.[F]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"597.35736"	"1790.05753"	"1790.05764"	"-0.06"	"-0.00004"	"5/106"	"5"	"106"	"10003677.6303101"	"HCD"	"MS2"	"20.69745"	"515.4"	"100.000"	"43.5776"	"12226"	"12226"	"12212"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"669.4"	""	"636.6"	""	"713.2"	""	"867.1"	""	"1008.0"	"995.9"	""	"788"	"5"	"35.000"	"28.000"	"12.4880958043914"	"14"	"0.0004557"	"0.002586"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"597.67914"	"1791.02286"	"1791.02640"	"-1.98"	"-0.00118"	"15/114"	"15"	"114"	"8582315.63146973"	"HCD"	"MS2"	"17.19172"	"282.3"	"59.767"	"42.8475"	"11982"	"11982"	"11955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.9"	""	"374.4"	""	"382.0"	""	"448.4"	""	"568.7"	"563.4"	""	"1090"	"29"	"37.000"	"30.000"	"0.0766295900650803"	"17"	"0"	"0.000181"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"597.67963"	"1791.02433"	"1791.02640"	"-1.16"	"-0.00069"	"14/114"	"14"	"114"	"8059184.43804932"	"HCD"	"MS2"	"27.26085"	"389.0"	"95.150"	"42.5475"	"11815"	"11815"	"11788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"520.7"	""	"491.1"	""	"516.3"	""	"636.2"	""	"766.4"	"760.7"	""	"1054"	"35"	"37.000"	"30.000"	"0.0179808664424756"	"17"	"0"	"2.354E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.9178"	"0.0000"	"1"	"1"	"1"	"896.01605"	"1791.02483"	"1791.02640"	"-0.88"	"-0.00079"	"11/114"	"11"	"114"	"1466227.47906494"	"HCD"	"MS2"	"0"	"117.0"	"100.000"	"42.8086"	"11966"	"11966"	"11939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.6"	""	"140.9"	""	"158.3"	""	"162.3"	""	"210.4"	"279.5"	""	"1058"	"73"	"37.000"	"30.000"	"2.59092995445908E-06"	"23"	"0"	"3.167E-07"	"1.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNLQHLDLLNNR"	"[R].lVNLQHLDLLNNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"597.68555"	"1791.04209"	"1791.04383"	"-0.97"	"-0.00058"	"8/116"	"8"	"116"	"3354825.81933594"	"HCD"	"MS2"	"17.88839"	"74.2"	"100.000"	"56.8319"	"17610"	"17610"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.6"	""	"104.4"	""	"114.6"	""	"117.4"	"1.5"	"126.8"	"115.2"	""	"895"	"36"	"36.000"	"29.000"	"0.0105631400934831"	"16"	"0"	"7.82E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNLQHLDLLNNR"	"[R].lVNLQHLDLLNNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"597.68646"	"1791.04483"	"1791.04383"	"0.56"	"0.00033"	"11/116"	"11"	"116"	"3604653.46405029"	"HCD"	"MS2"	"75.52435"	"77.7"	"100.000"	"56.9979"	"17732"	"17732"	"17701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.4"	""	"111.6"	""	"109.4"	""	"122.6"	"1.6"	"140.4"	"122.9"	""	"863"	"29"	"36.000"	"29.000"	"0.0535772970726125"	"18"	"0"	"4.281E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAMEAVAAQGK"	"[R].kAMEAVAAQGk.[AV]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"597.69666"	"1791.07541"	"1791.07655"	"-0.64"	"-0.00038"	"10/100"	"10"	"100"	"3325347.06292725"	"HCD"	"MS2"	"4.937687"	"173.2"	"100.000"	"31.9865"	"7503"	"7503"	"7474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.4"	""	"217.8"	""	"264.4"	""	"253.1"	""	"286.3"	"356.0"	""	"621"	"25"	"34.000"	"27.000"	"0.0939856619425455"	"14"	"0"	"3.026E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAMEAVAAQGK"	"[R].kAMEAVAAQGk.[AV]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"597.69690"	"1791.07614"	"1791.07655"	"-0.23"	"-0.00014"	"15/100"	"15"	"100"	"883245.273864746"	"HCD"	"MS2"	"11.90379"	"68.4"	"100.000"	"32.2083"	"7636"	"7636"	"7610"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.1"	""	"92.5"	""	"107.4"	""	"100.4"	""	"109.6"	"131.2"	""	"617"	"24"	"34.000"	"27.000"	"0.117829807554154"	"14"	"0"	"3.332E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGQIFLGGSIVK"	"[R].lTGQIFLGGSIVk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"597.70984"	"1791.11496"	"1791.11443"	"0.30"	"0.00018"	"17/130"	"17"	"130"	"2271250.52441406"	"HCD"	"MS2"	"48.05434"	"68.1"	"100.000"	"66.8542"	"21699"	"21699"	"21673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.2"	""	"93.5"	""	"99.0"	""	"113.4"	""	"135.1"	"140.1"	""	"334"	"48"	"32.000"	"25.000"	"0.000238076468131566"	"19"	"0"	"5.364E-06"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGQIFLGGSIVK"	"[R].lTGQIFLGGSIVk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9057"	"0.0000"	"1"	"1"	"1"	"597.70984"	"1791.11496"	"1791.11443"	"0.30"	"0.00018"	"10/130"	"10"	"130"	"2720827.03643799"	"HCD"	"MS2"	"17.22591"	"68.6"	"100.000"	"66.7567"	"21712"	"21712"	"21683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.2"	""	"104.8"	""	"112.4"	""	"105.7"	"1.5"	"133.3"	"135.6"	""	"334"	"53"	"32.000"	"25.000"	"9.17733259342234E-05"	"21"	"0"	"1.016E-05"	"1.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGQIFLGGSIVK"	"[R].lTGQIFLGGSIVk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"896.06152"	"1791.11577"	"1791.11443"	"0.75"	"0.00067"	"11/130"	"11"	"130"	"496954.030761719"	"HCD"	"MS2"	"32.46848"	"40.1"	"100.000"	"66.8004"	"21730"	"21730"	"21699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.0"	""	"66.5"	""	"73.1"	""	"66.1"	""	"65.7"	"77.4"	""	"344"	"66"	"32.000"	"25.000"	"4.01354786712333E-06"	"19"	"0"	"2.252E-06"	"1.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THITNAFNWLSMK"	"[K].THITNAFNWLSMk.[Q]"	"K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"597.98492"	"1791.94022"	"1791.94134"	"-0.63"	"-0.00037"	"12/132"	"12"	"132"	"3397938.95623779"	"HCD"	"MS2"	"32.101"	"119.0"	"100.000"	"55.4645"	"17105"	"17105"	"17077"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.5"	""	"207.3"	""	"120.4"	""	"158.9"	"3.8"	"162.2"	"294.7"	""	"1081"	"34"	"37.000"	"30.000"	"0.0209312757080134"	"16"	"0.0001889"	"0.0004464"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"896.49146"	"1791.97563"	"1791.97773"	"-1.17"	"-0.00105"	"10/146"	"10"	"146"	"461247.522888184"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"84.6404"	"28938"	"28938"	"28907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.4"	""	"37.7"	""	"40.0"	""	"35.2"	""	"38.2"	"43.3"	""	"1237"	"40"	"37.000"	"30.000"	"0.00667328547699149"	"19"	"0"	"5.526E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"896.49188"	"1791.97649"	"1791.97773"	"-0.69"	"-0.00062"	"11/146"	"11"	"146"	"621840.597961426"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"84.7115"	"29017"	"29017"	"29000"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.0"	""	"55.3"	""	"50.4"	""	"38.6"	"0.9"	"47.9"	"50.7"	""	"1241"	"49"	"37.000"	"30.000"	"0.000784768903605851"	"19"	"0"	"5.372E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"597.99725"	"1791.97721"	"1791.97773"	"-0.29"	"-0.00017"	"13/146"	"13"	"146"	"1007687.64904785"	"HCD"	"MS2"	"9.543359"	"11.9"	"100.000"	"85.4018"	"29299"	"29299"	"29282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.1"	""	"14.6"	""	"18.8"	""	"13.0"	""	"21.8"	"31.1"	""	"1231"	"29"	"37.000"	"30.000"	"0.0780239723435504"	"24"	"0"	"1.643E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9538"	"0.0000"	"1"	"1"	"1"	"896.49231"	"1791.97734"	"1791.97773"	"-0.21"	"-0.00019"	"12/146"	"12"	"146"	"659103.934265137"	"HCD"	"MS2"	"0"	"33.9"	"100.000"	"85.3301"	"29269"	"29269"	"29250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.0"	""	"48.1"	""	"57.6"	""	"43.6"	"1.0"	"45.5"	"62.5"	""	"1232"	"65"	"37.000"	"30.000"	"1.75622725278241E-05"	"19"	"0"	"1.816E-05"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7027"	"0.0000"	"1"	"1"	"1"	"597.99731"	"1791.97739"	"1791.97773"	"-0.19"	"-0.00011"	"15/146"	"15"	"146"	"1141339.06384277"	"HCD"	"MS2"	"9.537603"	"13.3"	"100.000"	"85.3194"	"29214"	"29214"	"29195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.7"	""	"21.7"	""	"13.0"	""	"24.2"	"1.7"	"20.5"	"28.0"	""	"1232"	"37"	"37.000"	"30.000"	"0.011764696072768"	"26"	"0"	"1.101E-05"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"896.49237"	"1791.97746"	"1791.97773"	"-0.15"	"-0.00013"	"12/146"	"12"	"146"	"681766.49786377"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"85.2779"	"29197"	"29197"	"29179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.1"	""	"55.1"	""	"67.1"	""	"39.5"	""	"57.9"	"69.1"	""	"1230"	"47"	"37.000"	"30.000"	"0.00116379132546666"	"21"	"0"	"3.606E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9219"	"0.0000"	"1"	"1"	"1"	"896.49237"	"1791.97746"	"1791.97773"	"-0.15"	"-0.00013"	"13/146"	"13"	"146"	"5972529.37060547"	"HCD"	"MS2"	"0"	"239.1"	"100.000"	"85.0092"	"29139"	"29139"	"29122"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.0"	""	"420.3"	""	"389.5"	""	"264.6"	"7.5"	"335.0"	"445.0"	""	"1230"	"64"	"37.000"	"30.000"	"2.26921223120643E-05"	"22"	"0"	"1.981E-06"	"1.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"896.49249"	"1791.97771"	"1791.97773"	"-0.01"	"-0.00001"	"5/146"	"5"	"146"	"113756.430541992"	"HCD"	"MS2"	"24.23354"	"6.0"	"100.000"	"85.5662"	"29314"	"29314"	"29294"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"6.5"	""	"11.6"	""	"10.4"	""	"9.4"	"10.1"	""	"1230"	"7"	"37.000"	"30.000"	"11.0885591062864"	"13"	"0.00103"	"0.01223"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"597.99744"	"1791.97776"	"1791.97773"	"0.02"	"0.00001"	"9/146"	"9"	"146"	"190194.286804199"	"HCD"	"MS2"	"6.394811"	"6.4"	"100.000"	"85.6400"	"29344"	"29344"	"29321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.1"	""	"9.2"	""	"8.9"	""	"8.0"	""	"14.0"	"12.5"	""	"1230"	"23"	"37.000"	"30.000"	"0.305404277691957"	"18"	"0.0001889"	"0.0004814"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"597.99744"	"1791.97776"	"1791.97773"	"0.02"	"0.00001"	"8/146"	"8"	"146"	"5065900.05969238"	"HCD"	"MS2"	"26.68431"	"63.5"	"100.000"	"84.7784"	"29044"	"29044"	"29026"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.5"	""	"77.6"	""	"90.3"	""	"88.4"	""	"112.2"	"131.6"	""	"1230"	"16"	"37.000"	"30.000"	"1.51661419239912"	"15"	"0"	"6.647E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"597.99756"	"1791.97812"	"1791.97773"	"0.22"	"0.00013"	"16/146"	"16"	"146"	"3286685.78216553"	"HCD"	"MS2"	"24.66234"	"37.5"	"100.000"	"84.6913"	"28958"	"28958"	"28939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.0"	""	"48.2"	""	"51.3"	""	"47.0"	""	"71.9"	"78.1"	""	"1224"	"30"	"37.000"	"30.000"	"0.0686675294032801"	"16"	"0"	"3.558E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"896.49286"	"1791.97844"	"1791.97773"	"0.40"	"0.00036"	"13/146"	"13"	"146"	"6112311.78601074"	"HCD"	"MS2"	"0"	"248.5"	"100.000"	"84.9593"	"29068"	"29068"	"29051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"389.2"	""	"433.4"	""	"425.9"	""	"300.1"	"2.4"	"345.2"	"451.2"	""	"1215"	"64"	"37.000"	"30.000"	"2.2832122310523E-05"	"20"	"0"	"1.897E-06"	"1.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"597.99847"	"1791.98087"	"1791.97773"	"1.75"	"0.00105"	"10/146"	"10"	"146"	"9768605.60437012"	"HCD"	"MS2"	"2.01258"	"50.8"	"89.437"	"85.0879"	"29171"	"29171"	"29154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.1"	""	"80.4"	""	"85.0"	""	"67.2"	""	"66.7"	"92.4"	""	"1234"	"43"	"37.000"	"30.000"	"0.00335958136803774"	"25"	"0"	"1.93E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPMGLLFSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"597.99890"	"1791.98215"	"1791.97773"	"2.47"	"0.00147"	"10/146"	"10"	"146"	"11754359.5547485"	"HCD"	"MS2"	"2.111569"	"63.5"	"86.126"	"84.9986"	"29084"	"29084"	"29067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.5"	""	"106.0"	""	"99.3"	""	"76.0"	""	"91.5"	"122.9"	""	"1228"	"40"	"37.000"	"30.000"	"0.00600023653666867"	"24"	"0"	"2.017E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAMLFALDRINR"	"[R].lEAMLFALDRInR.[D]"	"N-Term(TMT6plex); N12(Deamidated)"	"1"	"1"	"P31421"	"Metabotropic glutamate receptor 2 OS=Rattus norvegicus OX=10116 GN=Grm2 PE=1 SV=1"	"P31421"	"Metabotropic glutamate receptor 2 OS=Rattus norvegicus OX=10116 GN=Grm2 PE=1 SV=1"	"1"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"3"	"597.99945"	"1791.98380"	"1791.99886"	"-8.40"	"-0.00502"	"7/116"	"7"	"116"	"2479019.8770752"	"HCD"	"MS2"	"6.127666"	"34.7"	"100.000"	"69.0914"	"22604"	"22604"	"22586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.7"	""	"48.0"	""	"53.1"	""	"60.0"	""	"57.8"	"64.0"	""	"1209"	"12"	"37.000"	"30.000"	"4.11525077330366"	"22"	"0.009019"	"0.4044"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYHDIAQQAFK"	"[R].lYHDIAQQAFk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.00922"	"1792.01310"	"1792.01578"	"-1.50"	"-0.00089"	"11/88"	"11"	"88"	"6780672.87854004"	"HCD"	"MS2"	"59.67935"	"297.6"	"100.000"	"44.4194"	"12569"	"12569"	"12555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"394.5"	""	"365.9"	""	"371.6"	""	"375.9"	""	"510.1"	"818.6"	""	"1133"	"15"	"37.000"	"30.000"	"1.67957698216554"	"13"	"7.476E-05"	"0.0001941"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYHDIAQQAFK"	"[R].lYHDIAQQAFk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.00964"	"1792.01438"	"1792.01578"	"-0.78"	"-0.00047"	"11/88"	"11"	"88"	"6860319.07635498"	"HCD"	"MS2"	"51.24738"	"279.3"	"100.000"	"44.7176"	"12740"	"12740"	"12721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"403.9"	""	"380.1"	""	"385.4"	""	"357.5"	""	"480.0"	"652.2"	""	"1122"	"22"	"37.000"	"30.000"	"0.397157585039502"	"14"	"0.0001308"	"0.000308"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQFEGIVTDLIK"	"[R].aQFEGIVTDLIk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"0.7292"	"0.0000"	"1"	"1"	"1"	"598.02527"	"1792.06125"	"1792.06206"	"-0.45"	"-0.00027"	"8/118"	"8"	"118"	"3553772.53900146"	"HCD"	"MS2"	"37.73267"	"95.4"	"100.000"	"75.3833"	"25172"	"25172"	"25153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.1"	""	"121.1"	""	"143.4"	""	"150.7"	"1.9"	"176.2"	"188.4"	""	"748"	"48"	"35.000"	"28.000"	"0.000587315688820749"	""	"0"	"2.437E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQFEGIVTDLIK"	"[R].aQFEGIVTDLIk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.8406"	"0.0000"	"1"	"1"	"1"	"896.53430"	"1792.06133"	"1792.06206"	"-0.41"	"-0.00037"	"10/118"	"10"	"118"	"535071.543151855"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"75.2910"	"25135"	"25135"	"25105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.8"	""	"59.7"	""	"63.9"	""	"83.6"	"1.2"	"68.9"	"81.6"	""	"747"	"69"	"35.000"	"28.000"	"4.77848917102835E-06"	"28"	"0"	"3.661E-06"	"1.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVQATTLLTMDK"	"[R].iVQATTLLTMDk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"896.53516"	"1792.06304"	"1792.06543"	"-1.33"	"-0.00120"	"14/118"	"14"	"118"	"339479.458251953"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"64.9833"	"20988"	"20988"	"20963"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.7"	""	"32.1"	""	"45.0"	""	"30.3"	"1.2"	"53.1"	"54.9"	""	"743"	"36"	"35.000"	"28.000"	"0.00874900808967367"	"20"	"0"	"1.124E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVQATTLLTMDK"	"[R].iVQATTLLTMDk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.02631"	"1792.06437"	"1792.06543"	"-0.59"	"-0.00035"	"10/118"	"10"	"118"	"2143994.08416748"	"HCD"	"MS2"	"20.01212"	"67.0"	"100.000"	"64.9487"	"20974"	"20974"	"20947"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.8"	""	"97.3"	""	"101.6"	""	"94.4"	""	"120.1"	"135.8"	""	"723"	"29"	"35.000"	"28.000"	"0.0505950817110002"	"14"	"0.0001308"	"0.0002345"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVQATTLLTMDK"	"[R].iVQATTLLTMDk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"598.02643"	"1792.06473"	"1792.06543"	"-0.39"	"-0.00023"	"13/118"	"13"	"118"	"2277623.83569336"	"HCD"	"MS2"	"5.3396"	"60.2"	"100.000"	"64.9340"	"20915"	"20915"	"20889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.1"	""	"85.5"	""	"93.9"	""	"80.7"	"0.4"	"112.0"	"121.2"	""	"722"	"38"	"35.000"	"28.000"	"0.00527845959978875"	"20"	"0"	"7.941E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVQATTLLTMDK"	"[R].iVQATTLLTMDk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"896.53619"	"1792.06511"	"1792.06543"	"-0.18"	"-0.00016"	"15/118"	"15"	"118"	"352142.893127441"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"64.9455"	"20920"	"20920"	"20889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.8"	""	"51.5"	""	"42.9"	""	"30.9"	""	"49.2"	"65.0"	""	"715"	"65"	"35.000"	"28.000"	"1.07714965364654E-05"	"17"	"0"	"1.434E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAMEAVAAQGK"	"[R].kAMEAVAAqGk.[AV]"	"N-Term(TMT6plex); K1(TMT6plex); Q9(Deamidated); K11(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"598.03137"	"1792.07956"	"1792.06057"	"10.60"	"0.00633"	"15/100"	"15"	"100"	"1117594.63970947"	"HCD"	"MS2"	"33.30114"	"84.2"	"100.000"	"32.1785"	"7624"	"7624"	"7594"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.8"	""	"116.3"	""	"133.8"	""	"111.1"	""	"146.6"	"164.1"	""	"573"	"15"	"34.000"	"27.000"	"0.822478636750074"	"16"	"0.0007793"	"0.007303"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNNIYQNNLTK"	"[R].lNNIYQNNLTk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"897.01941"	"1793.03154"	"1793.03215"	"-0.34"	"-0.00031"	"14/98"	"14"	"98"	"367614.988708496"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"44.1003"	"12489"	"12489"	"12460"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.5"	""	"45.0"	""	"52.9"	""	"42.2"	""	"47.6"	"61.0"	""	"993"	"37"	"36.000"	"29.000"	"0.00952619029742798"	"22"	"0"	"9.322E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATTDALTSVLTK"	"[K].nATTDALTSVLTk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"598.35205"	"1793.04160"	"1793.04205"	"-0.25"	"-0.00015"	"14/138"	"14"	"138"	"3584192.33868408"	"HCD"	"MS2"	"19.39478"	"103.5"	"100.000"	"56.2348"	"17366"	"17366"	"17339"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.8"	""	"146.7"	""	"148.8"	""	"171.8"	""	"179.1"	"198.6"	""	"878"	"38"	"36.000"	"29.000"	"0.00757642834583698"	""	"0"	"4.162E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATTDALTSVLTK"	"[K].nATTDALTSVLTk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"3"	"3"	"0.6053"	"0.0000"	"1"	"1"	"1"	"598.35242"	"1793.04270"	"1793.04205"	"0.36"	"0.00022"	"14/138"	"14"	"138"	"3623722.42279053"	"HCD"	"MS2"	"22.07214"	"110.4"	"100.000"	"56.4447"	"17506"	"17506"	"17477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.5"	""	"150.7"	""	"150.9"	""	"191.7"	"3.0"	"188.1"	"225.8"	""	"866"	"38"	"36.000"	"29.000"	"0.0074901048354014"	""	"0"	"4.974E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKPVLMMNK"	"[R].ikPVLmmNk.[M]"	"N-Term(TMT6plex); K2(TMT6plex); M6(Oxidation); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.37036"	"1793.09653"	"1793.09960"	"-1.71"	"-0.00102"	"11/80"	"11"	"80"	"4854656.01782227"	"HCD"	"MS2"	"0"	"241.9"	"100.000"	"35.3660"	"8919"	"8919"	"8890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"253.1"	""	"216.2"	""	"277.9"	""	"619.6"	""	"506.9"	"424.1"	""	"409"	"8"	"33.000"	"26.000"	"3.1455262394197"	"13"	"0.003945"	"0.0999"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKPVLMMNK"	"[R].ikPVLmmNk.[M]"	"N-Term(TMT6plex); K2(TMT6plex); M6(Oxidation); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.37067"	"1793.09745"	"1793.09960"	"-1.20"	"-0.00072"	"11/80"	"11"	"80"	"4641250.512146"	"HCD"	"MS2"	"0"	"244.5"	"100.000"	"35.2787"	"8840"	"8840"	"8811"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.9"	""	"232.4"	""	"278.9"	""	"612.5"	"3.5"	"493.7"	"434.5"	""	"407"	"8"	"33.000"	"26.000"	"3.48790312077964"	"13"	"0.003976"	"0.1018"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYSGLIGPLIVCR"	"[K].dLYSGLIGPLIVcR.[K]"	"N-Term(TMT6plex); C13(Methylthio)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8491"	"0.0000"	"1"	"1"	"1"	"598.66614"	"1793.98386"	"1793.98551"	"-0.92"	"-0.00055"	"13/110"	"13"	"110"	"173393.660827637"	"HCD"	"MS2"	"9.743312"	"3.9"	"100.000"	"90.3619"	"31200"	"31200"	"31194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"6.0"	""	"3.6"	""	"7.7"	""	"10.3"	"6.0"	""	"1224"	"53"	"37.000"	"30.000"	"0.000274632178639077"	"23"	"0"	"1.402E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYSGLIGPLIVCR"	"[K].dLYSGLIGPLIVcR.[K]"	"N-Term(TMT6plex); C13(Methylthio)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.49573"	"1793.98418"	"1793.98551"	"-0.74"	"-0.00067"	"8/110"	"8"	"110"	"168900.660949707"	"HCD"	"MS2"	"35.49419"	"9.0"	"100.000"	"90.5441"	"31267"	"31267"	"31259"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"13.9"	""	"7.4"	""	"14.9"	""	"20.7"	"18.1"	""	"1190"	"31"	"37.000"	"30.000"	"0.0465068543730056"	"14"	"0.0001308"	"0.0003026"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYSGLIGPLIVCR"	"[K].dLYSGLIGPLIVcR.[K]"	"N-Term(TMT6plex); C13(Methylthio)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"897.49615"	"1793.98503"	"1793.98551"	"-0.27"	"-0.00024"	"7/110"	"7"	"110"	"196189.945800781"	"HCD"	"MS2"	"37.4552"	"10.3"	"100.000"	"90.4328"	"31198"	"31198"	"31187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"15.6"	""	"10.7"	""	"19.5"	""	"19.7"	"22.4"	""	"1184"	"28"	"37.000"	"30.000"	"0.0881701758004861"	"16"	"0.0004166"	"0.002301"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYSGLIGPLIVCR"	"[K].dLYSGLIGPLIVcR.[K]"	"N-Term(TMT6plex); C13(Methylthio)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.66675"	"1793.98569"	"1793.98551"	"0.10"	"0.00006"	"10/110"	"10"	"110"	"216975.725036621"	"HCD"	"MS2"	"7.66452"	"5.5"	"100.000"	"90.2564"	"31131"	"31131"	"31124"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"6.6"	""	"6.7"	""	"11.4"	""	"9.1"	"13.4"	""	"1198"	"32"	"37.000"	"30.000"	"0.0385857390043591"	"14"	"0"	"0.0001042"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.51294"	"1794.01860"	"1794.02356"	"-2.77"	"-0.00248"	"8/118"	"8"	"118"	"735861.071960449"	"HCD"	"MS2"	"0"	"53.7"	"100.000"	"50.7271"	"15185"	"15185"	"15162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.9"	""	"71.9"	""	"75.9"	""	"107.4"	"0.7"	"88.6"	"91.4"	""	"1053"	"45"	"37.000"	"30.000"	"0.00164209536602546"	"15"	"0.0001889"	"0.0009404"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"598.67810"	"1794.01975"	"1794.02356"	"-2.13"	"-0.00127"	"13/118"	"13"	"118"	"10712543.6263428"	"HCD"	"MS2"	"0"	"316.3"	"100.000"	"50.0471"	"14909"	"14909"	"14894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"368.3"	""	"418.5"	""	"434.9"	""	"683.7"	""	"540.1"	"553.6"	""	"1029"	"30"	"37.000"	"30.000"	"0.0513316682836703"	"15"	"0"	"0.0001063"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"598.67834"	"1794.02048"	"1794.02356"	"-1.72"	"-0.00103"	"13/118"	"13"	"118"	"21971681.8161621"	"HCD"	"MS2"	"20.36482"	"159.4"	"28.871"	"50.3092"	"14965"	"14965"	"14956"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.1"	""	"194.1"	""	"224.7"	""	"364.6"	"0.4"	"284.7"	"281.4"	""	"1027"	"41"	"37.000"	"30.000"	"0.00373714929629659"	"19"	"0"	"8.766E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.51404"	"1794.02080"	"1794.02356"	"-1.54"	"-0.00138"	"13/118"	"13"	"118"	"1674466.66577148"	"HCD"	"MS2"	"100"	"107.9"	"100.000"	"49.7926"	"14759"	"14759"	"14735"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.2"	""	"126.5"	""	"152.0"	""	"290.4"	""	"176.8"	"169.3"	""	"1016"	"29"	"37.000"	"30.000"	"0.0575259384523663"	"14"	"0"	"6.727E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"598.67859"	"1794.02121"	"1794.02356"	"-1.31"	"-0.00078"	"13/118"	"13"	"118"	"11196125.3835449"	"HCD"	"MS2"	"28.08225"	"266.2"	"89.573"	"49.7812"	"14754"	"14754"	"14735"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"305.6"	""	"357.5"	""	"363.8"	""	"583.0"	""	"460.8"	"452.7"	""	"1014"	"39"	"37.000"	"30.000"	"0.00575450483545863"	"18"	"0"	"4.819E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"598.67871"	"1794.02158"	"1794.02356"	"-1.11"	"-0.00066"	"12/118"	"12"	"118"	"19834569.5793457"	"HCD"	"MS2"	"19.22461"	"162.6"	"36.573"	"50.5713"	"15121"	"15121"	"15105"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.2"	""	"180.4"	""	"224.4"	""	"401.3"	""	"290.1"	"272.6"	""	"1015"	"41"	"37.000"	"30.000"	"0.00393945411689061"	"22"	"0"	"8.639E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"598.67889"	"1794.02213"	"1794.02356"	"-0.80"	"-0.00048"	"13/118"	"13"	"118"	"2592909.8182373"	"HCD"	"MS2"	"0"	"71.7"	"100.000"	"54.1944"	"16585"	"16585"	"16561"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.3"	""	"95.6"	""	"119.3"	""	"123.3"	"0.6"	"125.9"	"122.7"	""	"1016"	"28"	"37.000"	"30.000"	"0.0770661586669343"	"16"	"0"	"0.0001036"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.51477"	"1794.02226"	"1794.02356"	"-0.72"	"-0.00065"	"13/118"	"13"	"118"	"1954167.75726318"	"HCD"	"MS2"	"0"	"122.6"	"100.000"	"50.0881"	"14926"	"14926"	"14905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.0"	""	"155.9"	""	"183.4"	""	"310.3"	""	"197.2"	"173.0"	""	"1016"	"28"	"37.000"	"30.000"	"0.0790430540855378"	"14"	"0"	"0.0001524"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.51489"	"1794.02251"	"1794.02356"	"-0.59"	"-0.00053"	"15/118"	"15"	"118"	"2457725.30151367"	"HCD"	"MS2"	"0"	"138.1"	"100.000"	"50.4064"	"15054"	"15054"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.0"	""	"172.7"	""	"201.0"	""	"357.6"	""	"214.5"	"210.4"	""	"1016"	"39"	"37.000"	"30.000"	"0.00629308665957428"	"15"	"7.476E-05"	"0.0002016"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.51495"	"1794.02263"	"1794.02356"	"-0.52"	"-0.00047"	"15/118"	"15"	"118"	"1893243.38812256"	"HCD"	"MS2"	"0"	"111.7"	"100.000"	"50.3732"	"14990"	"14990"	"14970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.0"	""	"139.7"	""	"168.8"	""	"297.3"	""	"173.5"	"164.9"	""	"1018"	"37"	"37.000"	"30.000"	"0.0109324571133244"	"15"	"0"	"0.0001068"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"598.67908"	"1794.02268"	"1794.02356"	"-0.49"	"-0.00030"	"12/118"	"12"	"118"	"2550611.11846924"	"HCD"	"MS2"	"42.87226"	"73.1"	"100.000"	"54.0477"	"16472"	"16472"	"16445"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.7"	""	"93.8"	""	"129.4"	""	"117.2"	"1.4"	"138.5"	"115.5"	""	"1009"	"27"	"37.000"	"30.000"	"0.102061317564319"	"17"	"0"	"7.232E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVVPSPK"	"[R].imNTFSVVPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"3"	"3"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.9804"	"0.0000"	"1"	"1"	"1"	"897.51617"	"1794.02507"	"1794.02356"	"0.84"	"0.00075"	"9/118"	"9"	"118"	"2000910.0144043"	"HCD"	"MS2"	"0"	"111.8"	"100.000"	"50.0754"	"14871"	"14871"	"14857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.2"	""	"137.8"	""	"156.6"	""	"307.9"	"0.0"	"163.7"	"170.0"	""	"985"	"51"	"36.000"	"29.000"	"0.000377925533510696"	"17"	"0"	"2.939E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNGRPPLGFLNPR"	"[R].lLnGRPPLGFLNPR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.69055"	"1794.05710"	"1794.05875"	"-0.92"	"-0.00055"	"6/128"	"6"	"128"	"3800935.20599365"	"HCD"	"MS2"	"19.9444"	"110.4"	"100.000"	"60.3641"	"19102"	"19102"	"19075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.2"	""	"154.1"	""	"162.0"	""	"171.9"	""	"204.7"	"205.6"	""	"745"	"3"	"35.000"	"28.000"	"19.7299632849643"	"13"	"0.0001889"	"0.0004313"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNGRPPLGFLNPR"	"[R].lLNGRPPLGFLnPR.[L]"	"N-Term(TMT6plex); N12(Deamidated)"	"1"	"1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"598.69055"	"1794.05710"	"1794.05875"	"-0.92"	"-0.00055"	"7/128"	"7"	"128"	"3800935.20599365"	"HCD"	"MS2"	"19.9444"	"110.4"	"100.000"	"60.3641"	"19102"	"19102"	"19075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.2"	""	"154.1"	""	"162.0"	""	"171.9"	""	"204.7"	"205.6"	""	"745"	"3"	"35.000"	"28.000"	"19.8667248569139"	"13"	"0.003107"	"0.06081"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNGRPPLGFLNPR"	"[R].lLnGRPPLGFLNPR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"598.69061"	"1794.05729"	"1794.05875"	"-0.82"	"-0.00049"	"11/128"	"11"	"128"	"8322456.24499512"	"HCD"	"MS2"	"4.769505"	"195.7"	"100.000"	"60.5695"	"19132"	"19132"	"19113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.4"	""	"280.5"	""	"292.3"	""	"331.7"	"2.9"	"358.4"	"330.7"	""	"745"	"31"	"35.000"	"28.000"	"0.0272977138594241"	"15"	"0"	"3.113E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNGRPPLGFLNPR"	"[R].lLnGRPPLGFLNPR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"598.69098"	"1794.05838"	"1794.05875"	"-0.21"	"-0.00012"	"8/128"	"8"	"128"	"4624615.37878418"	"HCD"	"MS2"	"3.084126"	"140.8"	"100.000"	"60.2768"	"19013"	"19013"	"18985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.8"	""	"205.7"	""	"187.1"	""	"237.1"	""	"247.8"	"272.6"	""	"746"	"13"	"35.000"	"28.000"	"1.96204440363733"	"19"	"0.0001889"	"0.0004789"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNGRPPLGFLNPR"	"[R].lLnGRPPLGFLNPR.[L]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"598.69135"	"1794.05948"	"1794.05875"	"0.41"	"0.00024"	"10/128"	"10"	"128"	"9135989.75598145"	"HCD"	"MS2"	"6.627815"	"212.3"	"100.000"	"60.6568"	"19221"	"19221"	"19203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.3"	""	"327.0"	""	"311.8"	""	"334.2"	"1.0"	"372.8"	"377.3"	""	"739"	"23"	"35.000"	"28.000"	"0.207785119657834"	"15"	"0"	"7.141E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YILAATLDNTLK"	"[K].yILAATLDNTLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q498M4"	"WD repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Wdr5 PE=1 SV=1"	"Q498M4"	"WD repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Wdr5 PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"598.69849"	"1794.08091"	"1794.07771"	"1.78"	"0.00107"	"6/102"	"6"	"102"	"1175856.75097656"	"HCD"	"MS2"	"23.22832"	"47.3"	"100.000"	"67.9428"	"22136"	"22136"	"22106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.2"	""	"54.5"	""	"59.7"	""	"86.1"	""	"100.2"	"93.6"	""	"562"	"24"	"34.000"	"27.000"	"0.124654028944732"	"15"	"0.0001889"	"0.0008829"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLLEILHEVK"	"[K].eLLLEILHEVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.70923"	"1794.11313"	"1794.11409"	"-0.54"	"-0.00032"	"10/96"	"10"	"96"	"845310.236022949"	"HCD"	"MS2"	"38.56636"	"34.4"	"100.000"	"80.4778"	"27240"	"27240"	"27217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.8"	""	"40.7"	""	"59.5"	""	"56.9"	""	"57.8"	"69.1"	""	"321"	"31"	"32.000"	"25.000"	"0.0118706646646847"	"14"	"0"	"0.0001642"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYDIPAEMTGLWR"	"[R].nYDIPAEMTGLWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"598.97272"	"1794.90360"	"1794.90462"	"-0.57"	"-0.00034"	"13/132"	"13"	"132"	"1581257.12145996"	"HCD"	"MS2"	"0"	"37.7"	"100.000"	"68.0869"	"22246"	"22246"	"22218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.3"	""	"46.7"	""	"56.8"	""	"58.5"	"0.2"	"70.3"	"83.3"	""	"927"	"37"	"36.000"	"29.000"	"0.0103287969168679"	"25"	"0"	"9.618E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYDIPAEMTGLWR"	"[R].nYDIPAEMTGLWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"598.97296"	"1794.90433"	"1794.90462"	"-0.16"	"-0.00010"	"14/132"	"14"	"132"	"1504854.70977783"	"HCD"	"MS2"	"14.00235"	"34.4"	"100.000"	"68.1690"	"22228"	"22228"	"22202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.5"	""	"42.6"	""	"42.7"	""	"58.7"	"0.7"	"65.6"	"74.5"	""	"921"	"37"	"36.000"	"29.000"	"0.00957700324411252"	"16"	"0"	"0.0001135"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYDIPAEMTGLWR"	"[R].nYDIPAEMTGLWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.95612"	"1794.90495"	"1794.90462"	"0.19"	"0.00017"	"12/132"	"12"	"132"	"1261827.49908447"	"HCD"	"MS2"	"9.025936"	"69.9"	"100.000"	"67.9577"	"22193"	"22193"	"22170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.4"	""	"79.8"	""	"95.4"	""	"104.6"	"3.1"	"133.8"	"146.3"	""	"920"	"56"	"36.000"	"29.000"	"0.000121831006375908"	"16"	"0"	"2.761E-06"	"1.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYDIPAEMTGLWR"	"[R].nYDIPAEMTGLWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.95642"	"1794.90557"	"1794.90462"	"0.53"	"0.00047"	"10/132"	"10"	"132"	"1310629.80432129"	"HCD"	"MS2"	"30.89939"	"77.0"	"100.000"	"68.0860"	"22194"	"22194"	"22170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.3"	""	"100.9"	""	"103.1"	""	"106.0"	""	"150.7"	"173.3"	""	"932"	"32"	"36.000"	"29.000"	"0.0272512179211328"	"15"	"0"	"0.0001659"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIPEFWLTVFK"	"[K].gIPEFWLTVFk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.02332"	"1795.05539"	"1795.05585"	"-0.25"	"-0.00015"	"10/88"	"10"	"88"	"242184.088928223"	"HCD"	"MS2"	"19.8561"	"9.6"	"100.000"	"95.0641"	"32772"	"32772"	"32767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.9"	""	"10.3"	""	"11.5"	""	"22.6"	""	"19.4"	"22.9"	""	"680"	"24"	"35.000"	"28.000"	"0.126905053650545"	"14"	"0.000523"	"0.003019"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIPEFWLTVFK"	"[K].gIPEFWLTVFk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.03143"	"1795.05559"	"1795.05585"	"-0.14"	"-0.00013"	"6/88"	"6"	"88"	"106949.025268555"	"HCD"	"MS2"	"16.27562"	"5.0"	"100.000"	"94.8689"	"32694"	"32694"	"32686"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	"7.0"	""	"8.2"	""	"8.7"	""	"9.6"	"9.6"	""	"680"	"4"	"35.000"	"28.000"	"13.3499278035864"	"13"	"0.002683"	"0.04019"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIPEFWLTVFK"	"[K].gIPEFWLTVFk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"599.02386"	"1795.05704"	"1795.05585"	"0.66"	"0.00040"	"9/88"	"9"	"88"	"247477.215454102"	"HCD"	"MS2"	"18.83033"	"9.3"	"100.000"	"94.8830"	"32699"	"32699"	"32688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.9"	""	"12.2"	""	"14.4"	""	"15.3"	""	"16.0"	"20.4"	""	"680"	"20"	"35.000"	"28.000"	"0.304424020286862"	"16"	"0.0006037"	"0.00592"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINDYVEK"	"[K].kVINDYVEk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"1"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"599.03546"	"1795.09183"	"1795.09325"	"-0.79"	"-0.00047"	"8/86"	"8"	"86"	"16864200.5623779"	"HCD"	"MS2"	"28.62011"	"921.9"	"100.000"	"36.4800"	"9376"	"9376"	"9353"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1644.7"	""	"1471.0"	""	"1400.4"	""	"1203.9"	""	"1479.4"	"1518.5"	""	"429"	"19"	"33.000"	"26.000"	"0.256110448407587"	"14"	"0.0001859"	"0.0003218"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINDYVEK"	"[K].kVINDYVEk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"1"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"599.03552"	"1795.09201"	"1795.09325"	"-0.69"	"-0.00041"	"5/86"	"5"	"86"	"16234151.3456421"	"HCD"	"MS2"	"7.230891"	"928.3"	"100.000"	"36.4254"	"9310"	"9310"	"9290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1652.2"	""	"1475.6"	""	"1467.1"	""	"1145.2"	""	"1511.3"	"1525.6"	""	"429"	"23"	"33.000"	"26.000"	"0.112571200223576"	"21"	"0.0001859"	"0.0003203"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"898.47748"	"1795.94768"	"1795.95184"	"-2.32"	"-0.00208"	"12/90"	"12"	"90"	"241761.771179199"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"46.4540"	"13397"	"13397"	"13368"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.2"	""	"31.6"	""	"32.6"	""	"44.7"	""	"46.3"	"44.7"	""	"1117"	"47"	"37.000"	"30.000"	"0.00110413754400247"	"19"	"0.0001889"	"0.0006367"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"898.47821"	"1795.94914"	"1795.95184"	"-1.50"	"-0.00135"	"15/90"	"15"	"90"	"447855.58026123"	"HCD"	"MS2"	"0"	"48.6"	"100.000"	"46.6701"	"13533"	"13533"	"13506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.7"	""	"68.0"	""	"66.5"	""	"70.5"	""	"94.5"	"104.9"	""	"1110"	"47"	"37.000"	"30.000"	"0.0011410192807712"	"23"	"0"	"5.057E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAPGALDVSLNR"	"[R].kPAPGALDVSLNR.[F]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q6P4Z9"	"COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 SV=1"	"Q6P4Z9"	"COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.36499"	"1796.08042"	"1796.07944"	"0.55"	"0.00033"	"12/124"	"12"	"124"	"6413962.07470703"	"HCD"	"MS2"	"22.13143"	"399.1"	"100.000"	"37.1475"	"9607"	"9607"	"9578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"594.7"	""	"485.3"	""	"540.4"	""	"606.5"	"2.7"	"681.4"	"870.7"	""	"511"	"16"	"34.000"	"27.000"	"0.664340768388726"	"13"	"0"	"9.345E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAPGALDVSLNR"	"[R].kPAPGALDVSLNR.[F]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q6P4Z9"	"COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 SV=1"	"Q6P4Z9"	"COP9 signalosome complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Cops8 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.36511"	"1796.08078"	"1796.07944"	"0.75"	"0.00045"	"18/124"	"18"	"124"	"6876253.4788208"	"HCD"	"MS2"	"20.84434"	"365.0"	"100.000"	"37.2296"	"9684"	"9684"	"9654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"543.3"	""	"455.7"	""	"491.5"	""	"533.4"	"4.0"	"647.6"	"784.3"	""	"511"	"27"	"34.000"	"27.000"	"0.0562847711310158"	"14"	"0"	"5.996E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLPTPVVSWLISK"	"[R].NLLPTPVVSWLISk.[K]"	"K14(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.54657"	"1796.08586"	"1796.08832"	"-1.37"	"-0.00123"	"4/146"	"4"	"146"	"68496.1665649414"	"HCD"	"MS2"	"16.79333"	"3.8"	"100.000"	"87.6998"	"30165"	"30165"	"30150"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"4.7"	""	"5.7"	""	"7.7"	""	"6.1"	"5.9"	""	"477"	"6"	"33.000"	"26.000"	"5.41362767174292"	"13"	"0.003507"	"0.07875"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGLYGKDQK"	"[R].sLGLYGkDQk.[E]"	"N-Term(TMT6plex); K7(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.36725"	"1796.08719"	"1796.08850"	"-0.73"	"-0.00043"	"11/92"	"11"	"92"	"2761400.04022217"	"HCD"	"MS2"	"0"	"213.9"	"100.000"	"35.7836"	"9047"	"9047"	"9019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.0"	""	"266.4"	""	"304.1"	""	"331.2"	"1.5"	"399.7"	"409.6"	""	"450"	"3"	"33.000"	"26.000"	"11.2249009678503"	"13"	"0.0003146"	"0.001397"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGLYGKDQK"	"[R].sLGLYGkDQk.[E]"	"N-Term(TMT6plex); K7(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"P04906"	"Glutathione S-transferase P OS=Rattus norvegicus OX=10116 GN=Gstp1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.36768"	"1796.08847"	"1796.08850"	"-0.01"	"-0.00001"	"10/92"	"10"	"92"	"6815519.28417969"	"HCD"	"MS2"	"12.4789"	"470.7"	"100.000"	"35.7560"	"9079"	"9079"	"9049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"736.9"	""	"619.1"	""	"603.8"	""	"793.4"	"1.3"	"835.0"	"868.2"	""	"439"	"13"	"33.000"	"26.000"	"1.02196147528289"	"13"	"0.0001859"	"0.0003451"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNMALVQQMEK"	"[K].fNMALVQQMEk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"599.66412"	"1796.97782"	"1796.98032"	"-1.39"	"-0.00083"	"12/98"	"12"	"98"	"3343276.93444824"	"HCD"	"MS2"	"0"	"122.7"	"100.000"	"62.9325"	"20150"	"20150"	"20131"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.6"	""	"142.1"	""	"146.5"	""	"205.7"	"1.8"	"249.4"	"257.9"	""	"1015"	"27"	"37.000"	"30.000"	"0.104096480575397"	"17"	"0.0001889"	"0.0006451"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNMALVQQMEK"	"[K].fNMALVQQMEk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.66473"	"1796.97965"	"1796.98032"	"-0.37"	"-0.00022"	"12/98"	"12"	"98"	"3061997.13348389"	"HCD"	"MS2"	"7.804713"	"100.5"	"100.000"	"62.8995"	"20084"	"20084"	"20057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.1"	""	"112.0"	""	"139.1"	""	"171.4"	""	"188.0"	"213.4"	""	"1015"	"11"	"37.000"	"30.000"	"4.23093201194464"	"13"	"0.0002277"	"0.0012"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNMALVQQMEK"	"[K].fNMALVQQMEk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"898.99377"	"1796.98027"	"1796.98032"	"-0.03"	"-0.00002"	"12/98"	"12"	"98"	"313256.375183105"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"62.9879"	"20173"	"20173"	"20147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.5"	""	"41.4"	""	"37.4"	""	"52.4"	"1.9"	"67.0"	"96.2"	""	"1026"	"39"	"37.000"	"30.000"	"0.00698421122105032"	"25"	"0"	"0.0001328"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNMALVQQMEK"	"[K].fNMALVQQMEk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"898.99500"	"1796.98271"	"1796.98032"	"1.33"	"0.00120"	"7/98"	"7"	"98"	"459375.76965332"	"HCD"	"MS2"	"0"	"54.0"	"100.000"	"62.8534"	"20065"	"20065"	"20041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.2"	""	"61.0"	""	"62.7"	""	"83.8"	"1.1"	"98.0"	"130.7"	""	"1020"	"29"	"37.000"	"30.000"	"0.0649486571318498"	"26"	"0.0001859"	"0.000324"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQLADMLLKHNR"	"[R].lVQLADmLLKHnR.[N]"	"N-Term(TMT6plex); M7(Oxidation); N12(Deamidated)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"1"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"599.68030"	"1797.02634"	"1797.02541"	"0.52"	"0.00031"	"4/116"	"4"	"116"	"6496084.8081665"	"HCD"	"MS2"	"28.40107"	"280.4"	"100.000"	"64.1493"	"20647"	"20647"	"20627"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"409.6"	""	"360.6"	""	"416.8"	""	"465.5"	""	"476.0"	"530.2"	""	"863"	"14"	"36.000"	"29.000"	"1.83223341842834"	"16"	"0.007843"	"0.3167"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQLADMLLKHNR"	"[R].lVQLADmLLKHnR.[N]"	"N-Term(TMT6plex); M7(Oxidation); N12(Deamidated)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"599.68121"	"1797.02909"	"1797.02541"	"2.05"	"0.00123"	"6/116"	"6"	"116"	"5587686.91723633"	"HCD"	"MS2"	"17.22858"	"254.1"	"100.000"	"64.1438"	"20592"	"20592"	"20569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.6"	""	"318.4"	""	"377.7"	""	"435.8"	"4.0"	"439.0"	"478.3"	""	"859"	"8"	"36.000"	"29.000"	"7.04633307589201"	"14"	"0.009642"	"0.4361"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLENVETFIK"	"[K].vFLENVETFIk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"899.03119"	"1797.05510"	"1797.05624"	"-0.64"	"-0.00057"	"6/100"	"6"	"100"	"103802.449707031"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"79.0252"	"26699"	"26699"	"26671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.4"	""	"15.8"	""	"18.2"	""	"17.3"	""	"15.8"	"21.1"	""	"725"	"8"	"35.000"	"28.000"	"5.86554013645611"	"14"	"0.003539"	"0.08234"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPILLGSVAHQIYR"	"[K].tPILLGSVAHQIYR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.69092"	"1797.05820"	"1797.05842"	"-0.12"	"-0.00007"	"12/122"	"12"	"122"	"10532622.2045898"	"HCD"	"MS2"	"16.27064"	"118.8"	"100.000"	"50.7478"	"15193"	"15193"	"15174"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.6"	""	"168.2"	""	"167.8"	""	"197.6"	"0.7"	"215.3"	"217.2"	""	"695"	"70"	"35.000"	"28.000"	"3.51523860355314E-06"	"17"	"0"	"1.735E-07"	"1.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLENVETFIK"	"[K].vFLENVETFIk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"899.03278"	"1797.05828"	"1797.05624"	"1.13"	"0.00102"	"4/100"	"4"	"100"	"125480.596557617"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"79.0444"	"26656"	"26656"	"26625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.0"	""	"14.7"	""	"18.3"	""	"16.0"	""	"24.0"	"21.7"	""	"695"	"9"	"35.000"	"28.000"	"4.21652625536579"	"13"	"0.004913"	"0.1474"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPILLGSVAHQIYR"	"[K].tPILLGSVAHQIYR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"3"	"3"	"0.9765"	"0.0000"	"1"	"1"	"1"	"599.69153"	"1797.06003"	"1797.05842"	"0.90"	"0.00054"	"13/122"	"13"	"122"	"10126025.4019775"	"HCD"	"MS2"	"13.36934"	"106.3"	"88.921"	"50.5111"	"15046"	"15046"	"15026"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.3"	""	"143.9"	""	"162.3"	""	"185.6"	"0.3"	"180.6"	"203.8"	""	"690"	"85"	"35.000"	"28.000"	"1.14240236911494E-07"	"20"	"0"	"1.372E-07"	"1.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAIIAEGIPEALTR"	"[R].tIAIIAEGIPEALTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"899.03625"	"1797.06523"	"1797.06832"	"-1.72"	"-0.00154"	"12/138"	"12"	"138"	"568886.909729004"	"HCD"	"MS2"	"25.24042"	"23.0"	"100.000"	"75.1151"	"25115"	"25115"	"25087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.1"	""	"30.6"	""	"32.1"	""	"37.4"	""	"38.2"	"48.3"	""	"652"	"60"	"35.000"	"28.000"	"3.52547468123128E-05"	"23"	"0"	"7.123E-06"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAIIAEGIPEALTR"	"[R].tIAIIAEGIPEALTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"899.03748"	"1797.06767"	"1797.06832"	"-0.36"	"-0.00032"	"12/138"	"12"	"138"	"646567.52935791"	"HCD"	"MS2"	"0"	"27.9"	"100.000"	"75.1363"	"25072"	"25072"	"25041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.4"	""	"37.8"	""	"42.0"	""	"42.5"	"0.2"	"41.8"	"57.3"	""	"633"	"60"	"35.000"	"28.000"	"2.94695642585568E-05"	"21"	"0"	"4.227E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAIIAEGIPEALTR"	"[R].tIAIIAEGIPEALTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"599.69415"	"1797.06791"	"1797.06832"	"-0.23"	"-0.00014"	"15/138"	"15"	"138"	"3915961.16784668"	"HCD"	"MS2"	"14.78141"	"32.8"	"100.000"	"75.3025"	"25139"	"25139"	"25121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.3"	""	"31.3"	""	"41.0"	""	"84.0"	""	"68.4"	"58.5"	""	"612"	"61"	"34.000"	"27.000"	"2.21167559902264E-05"	"19"	"0"	"1.231E-06"	"1.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAIIAEGIPEALTR"	"[R].tIAIIAEGIPEALTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"599.69415"	"1797.06791"	"1797.06832"	"-0.23"	"-0.00014"	"12/138"	"12"	"138"	"4022693.56933594"	"HCD"	"MS2"	"19.68101"	"47.2"	"100.000"	"75.2882"	"25185"	"25185"	"25167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.8"	""	"44.9"	""	"53.2"	""	"138.1"	"0.7"	"80.1"	"88.0"	""	"612"	"41"	"34.000"	"27.000"	"0.00238628013820117"	"22"	"0"	"6.402E-06"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAIIAEGIPEALTR"	"[R].tIAIIAEGIPEALTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"899.03760"	"1797.06792"	"1797.06832"	"-0.22"	"-0.00020"	"8/138"	"8"	"138"	"181556.790649414"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"75.4704"	"25260"	"25260"	"25231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.7"	""	"12.9"	""	"22.1"	""	"20.4"	""	"25.7"	"25.5"	""	"614"	"47"	"34.000"	"27.000"	"0.000608328796922165"	"19"	"0"	"3.559E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAIIAEGIPEALTR"	"[R].tIAIIAEGIPEALTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"899.03839"	"1797.06951"	"1797.06832"	"0.66"	"0.00060"	"6/138"	"6"	"138"	"159953.219665527"	"HCD"	"MS2"	"12.01378"	"11.3"	"100.000"	"75.5125"	"25225"	"25225"	"25201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.8"	""	"10.7"	""	"17.3"	""	"18.1"	""	"21.6"	"22.1"	""	"608"	"39"	"34.000"	"27.000"	"0.00416748056914115"	"17"	"0.0001308"	"0.0002918"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADELVFFVNGK"	"[M].tADELVFFVNGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"899.50977"	"1798.01225"	"1798.01511"	"-1.59"	"-0.00143"	"13/98"	"13"	"98"	"358927.487548828"	"HCD"	"MS2"	"17.60765"	"37.7"	"100.000"	"68.9901"	"22563"	"22563"	"22538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.3"	""	"56.5"	""	"62.4"	""	"54.9"	"0.8"	"65.0"	"67.0"	""	"911"	"43"	"36.000"	"29.000"	"0.00219022323218851"	"27"	"0.0001859"	"0.0003721"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADELVFFVNGK"	"[M].tADELVFFVNGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"899.51208"	"1798.01689"	"1798.01511"	"0.99"	"0.00089"	"7/98"	"7"	"98"	"506525.048522949"	"HCD"	"MS2"	"16.651"	"46.1"	"100.000"	"68.7602"	"22521"	"22521"	"22490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.5"	""	"59.2"	""	"69.3"	""	"68.1"	""	"82.4"	"82.4"	""	"901"	"41"	"36.000"	"29.000"	"0.00336275165663735"	"25"	"0"	"0.0001071"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPAINQFTQALDR"	"[K].vPPAINQFTQALDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"600.33746"	"1798.99784"	"1799.00130"	"-1.92"	"-0.00115"	"9/128"	"9"	"128"	"2567035.3527832"	"HCD"	"MS2"	"6.080737"	"61.5"	"100.000"	"65.1621"	"21008"	"21008"	"20985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.7"	""	"72.5"	""	"75.5"	""	"116.4"	"2.7"	"127.5"	"115.5"	""	"904"	"20"	"36.000"	"29.000"	"0.404704874028416"	"14"	"0"	"3.132E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPAINQFTQALDR"	"[K].vPPAINQFTQALDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"600.33783"	"1798.99894"	"1799.00130"	"-1.31"	"-0.00079"	"15/128"	"15"	"128"	"2998453.91943359"	"HCD"	"MS2"	"7.537425"	"63.9"	"100.000"	"65.1425"	"21053"	"21053"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.9"	""	"68.7"	""	"83.1"	""	"110.5"	""	"126.1"	"133.8"	""	"908"	"34"	"36.000"	"29.000"	"0.0177441766689751"	"17"	"0"	"3.585E-05"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPAINQFTQALDR"	"[K].vPPAINQFTQALDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.00354"	"1798.99980"	"1799.00130"	"-0.83"	"-0.00075"	"11/128"	"11"	"128"	"606788.875793457"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"65.1101"	"21040"	"21040"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.7"	""	"17.7"	""	"26.1"	""	"39.4"	""	"42.3"	"40.5"	""	"907"	"41"	"36.000"	"29.000"	"0.00326270111524678"	"15"	"0"	"0.000175"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPAINQFTQALDR"	"[K].vPPAINQFTQALDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"600.33838"	"1799.00058"	"1799.00130"	"-0.40"	"-0.00024"	"10/128"	"10"	"128"	"2534750.79077148"	"HCD"	"MS2"	"24.29189"	"58.3"	"100.000"	"65.4801"	"21138"	"21138"	"21113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.2"	""	"70.0"	""	"73.9"	""	"114.3"	""	"127.6"	"110.6"	""	"905"	"21"	"36.000"	"29.000"	"0.385139962286575"	"15"	"0.0001308"	"0.0002519"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPAINQFTQALDR"	"[K].vPPAINQFTQALDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.00409"	"1799.00090"	"1799.00130"	"-0.22"	"-0.00020"	"6/128"	"6"	"128"	"225532.360229492"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"65.5066"	"21202"	"21202"	"21171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.3"	""	"10.1"	""	"19.7"	""	"20.6"	""	"31.5"	"23.9"	""	"886"	"5"	"36.000"	"29.000"	"14.7029244695807"	"13"	"0.003286"	"0.06911"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPAINQFTQALDR"	"[K].vPPAINQFTQALDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"900.00427"	"1799.00127"	"1799.00130"	"-0.02"	"-0.00002"	"8/128"	"8"	"128"	"459580.661499023"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"65.1021"	"20984"	"20984"	"20953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.9"	""	"22.0"	""	"23.8"	""	"38.1"	"2.1"	"35.3"	"39.0"	""	"886"	"59"	"36.000"	"29.000"	"5.52590896809624E-05"	"21"	"0.0001889"	"0.0003761"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPAINQFTQALDR"	"[K].vPPAINQFTQALDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"900.00537"	"1799.00347"	"1799.00130"	"1.20"	"0.00108"	"9/128"	"9"	"128"	"606439.617919922"	"HCD"	"MS2"	"33.69673"	"36.2"	"100.000"	"65.4387"	"21121"	"21121"	"21097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.5"	""	"44.1"	""	"47.1"	""	"66.4"	""	"76.6"	"58.9"	""	"874"	"44"	"36.000"	"29.000"	"0.00157572867000458"	"21"	"0.0001889"	"0.0004121"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSAVISLEGKPL"	"[K].lGGSAVISLEGkPL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.05511"	"1799.10295"	"1799.10426"	"-0.72"	"-0.00065"	"10/116"	"10"	"116"	"1972745.71405029"	"HCD"	"MS2"	"24.77"	"136.5"	"100.000"	"63.0385"	"20194"	"20194"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.5"	""	"201.4"	""	"190.3"	""	"268.6"	"1.8"	"215.9"	"230.6"	""	"375"	"57"	"32.000"	"25.000"	"3.45144750275429E-05"	"16"	"0"	"2.259E-06"	"1.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSAVISLEGKPL"	"[K].lGGSAVISLEGkPL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.05518"	"1799.10307"	"1799.10426"	"-0.66"	"-0.00059"	"10/116"	"10"	"116"	"637112.965454102"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"63.4205"	"20350"	"20350"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.9"	""	"66.6"	""	"72.6"	""	"73.2"	"4.8"	"74.4"	"79.4"	""	"373"	"29"	"32.000"	"25.000"	"0.0230504196337402"	"14"	"0"	"2.097E-05"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSAVISLEGKPL"	"[K].lGGSAVISLEGkPL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.37262"	"1799.10331"	"1799.10426"	"-0.53"	"-0.00032"	"9/116"	"9"	"116"	"13023592.8695068"	"HCD"	"MS2"	"17.44409"	"251.7"	"100.000"	"63.0617"	"20203"	"20203"	"20179"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.7"	""	"365.2"	""	"357.5"	""	"447.8"	"0.5"	"436.3"	"461.9"	""	"373"	"54"	"32.000"	"25.000"	"7.22235507778817E-05"	"16"	"0"	"7.147E-06"	"1.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSAVISLEGKPL"	"[K].lGGSAVISLEGkPL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.37268"	"1799.10349"	"1799.10426"	"-0.43"	"-0.00026"	"9/116"	"9"	"116"	"6767757.22302246"	"HCD"	"MS2"	"14.85077"	"137.7"	"100.000"	"63.3675"	"20328"	"20328"	"20307"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.0"	""	"188.1"	""	"198.8"	""	"244.7"	"8.6"	"238.3"	"259.4"	""	"373"	"31"	"32.000"	"25.000"	"0.0143773496980516"	"14"	"0"	"9.289E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSAVISLEGKPL"	"[K].lGGSAVISLEGkPL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.05566"	"1799.10405"	"1799.10426"	"-0.11"	"-0.00010"	"10/116"	"10"	"116"	"723028.707946777"	"HCD"	"MS2"	"0"	"51.2"	"100.000"	"63.3161"	"20254"	"20254"	"20233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.0"	""	"74.2"	""	"77.9"	""	"87.2"	"1.8"	"88.3"	"93.9"	""	"361"	"56"	"32.000"	"25.000"	"4.46146208175412E-05"	"16"	"0"	"8.895E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSAVISLEGKPL"	"[K].lGGSAVISLEGkPL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.37311"	"1799.10477"	"1799.10426"	"0.29"	"0.00017"	"9/116"	"9"	"116"	"10073002.8687744"	"HCD"	"MS2"	"26.65763"	"202.9"	"100.000"	"62.9664"	"20111"	"20111"	"20089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"281.3"	""	"289.0"	""	"292.2"	""	"372.2"	"0.7"	"336.7"	"347.7"	""	"371"	"54"	"32.000"	"25.000"	"7.33405080226377E-05"	"16"	"0"	"6.476E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSAVISLEGKPL"	"[K].lGGSAVISLEGkPL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9825"	"0.0000"	"1"	"1"	"1"	"900.05627"	"1799.10527"	"1799.10426"	"0.56"	"0.00051"	"10/116"	"10"	"116"	"2544349.93389893"	"HCD"	"MS2"	"0"	"173.8"	"100.000"	"62.9824"	"20118"	"20118"	"20089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.3"	""	"257.2"	""	"233.4"	""	"311.0"	"0.4"	"288.6"	"324.0"	""	"360"	"57"	"32.000"	"25.000"	"3.33635692214666E-05"	"17"	"0"	"2.686E-06"	"1.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGTIFLAGPPLVK"	"[R].qGTIFLAGPPLVk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"900.06207"	"1799.11687"	"1799.11951"	"-1.47"	"-0.00132"	"12/120"	"12"	"120"	"350215.637451172"	"HCD"	"MS2"	"0"	"30.3"	"100.000"	"64.6030"	"20833"	"20833"	"20803"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.8"	""	"39.8"	""	"40.4"	""	"54.1"	"1.4"	"51.5"	"57.9"	""	"305"	"41"	"31.000"	"24.000"	"0.00115151564718979"	"17"	"0"	"0.0001422"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGTIFLAGPPLVK"	"[R].qGTIFLAGPPLVk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"900.06250"	"1799.11772"	"1799.11951"	"-0.99"	"-0.00089"	"14/120"	"14"	"120"	"324204.429443359"	"HCD"	"MS2"	"0"	"30.7"	"100.000"	"64.5835"	"20772"	"20772"	"20745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.4"	""	"39.6"	""	"47.0"	""	"47.1"	""	"53.3"	"58.2"	""	"300"	"47"	"31.000"	"24.000"	"0.000295863410417228"	"19"	"0"	"6.569E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGTIFLAGPPLVK"	"[R].qGTIFLAGPPLVk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"600.37805"	"1799.11960"	"1799.11951"	"0.05"	"0.00003"	"10/120"	"10"	"120"	"5415557.89031982"	"HCD"	"MS2"	"25.44563"	"129.6"	"100.000"	"64.5179"	"20798"	"20798"	"20771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.1"	""	"194.5"	""	"195.6"	""	"175.4"	"2.4"	"243.5"	"232.9"	""	"291"	"20"	"31.000"	"24.000"	"0.157711365990085"	"19"	"0"	"0.0001294"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGTIFLAGPPLVK"	"[R].qGTIFLAGPPLVk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.37897"	"1799.12235"	"1799.11951"	"1.58"	"0.00095"	"10/120"	"10"	"120"	"6277152.33447266"	"HCD"	"MS2"	"39.7289"	"133.4"	"100.000"	"64.4963"	"20736"	"20736"	"20713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.8"	""	"201.4"	""	"206.0"	""	"191.5"	""	"248.1"	"228.8"	""	"272"	"18"	"31.000"	"24.000"	"0.21161132589829"	"14"	"0"	"0.0001814"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"900.06763"	"1799.12798"	"1799.12941"	"-0.80"	"-0.00072"	"9/98"	"9"	"98"	"81443.2666625977"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"91.8210"	"31704"	"31704"	"31693"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"7.4"	""	"8.4"	""	"8.6"	""	"9.4"	"6.4"	""	"248"	"28"	"30.000"	"23.000"	"0.0217982528130878"	"20"	"0.0003839"	"0.00178"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.8356"	"0.0000"	"1"	"1"	"1"	"900.06769"	"1799.12810"	"1799.12941"	"-0.73"	"-0.00065"	"10/98"	"10"	"98"	"1516714.75866699"	"HCD"	"MS2"	"0"	"93.3"	"100.000"	"92.0861"	"31791"	"31791"	"31784"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.5"	""	"119.3"	""	"128.0"	""	"178.3"	""	"163.7"	"182.6"	""	"248"	"73"	"30.000"	"23.000"	"5.68095939526022E-07"	""	"0"	"8.129E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"600.38092"	"1799.12821"	"1799.12941"	"-0.67"	"-0.00040"	"11/98"	"11"	"98"	"293163.321228027"	"HCD"	"MS2"	"31.48397"	"9.8"	"100.000"	"92.6186"	"31974"	"31974"	"31970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.7"	""	"10.4"	""	"8.3"	""	"22.7"	""	"18.8"	"22.0"	""	"248"	"33"	"30.000"	"23.000"	"0.0057599894127621"	""	"0.0001889"	"0.000478"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"900.06787"	"1799.12847"	"1799.12941"	"-0.52"	"-0.00047"	"9/98"	"9"	"98"	"508668.74005127"	"HCD"	"MS2"	"0"	"31.5"	"100.000"	"92.3414"	"31883"	"31883"	"31877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.6"	""	"35.5"	""	"51.7"	""	"57.1"	"0.4"	"56.2"	"62.2"	""	"248"	"55"	"30.000"	"23.000"	"3.7793897871387E-05"	""	"0"	"1.941E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.06799"	"1799.12871"	"1799.12941"	"-0.39"	"-0.00035"	"4/98"	"4"	"98"	"85881.8635253906"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"92.4549"	"31894"	"31894"	"31888"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"6.0"	""	"5.0"	""	"8.5"	""	"9.3"	"8.4"	""	"248"	"10"	"30.000"	"23.000"	"1.16257688858809"	"13"	"0.00423"	"0.1093"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"600.38110"	"1799.12876"	"1799.12941"	"-0.36"	"-0.00022"	"10/98"	"10"	"98"	"330417.233520508"	"HCD"	"MS2"	"23.1237"	"11.5"	"100.000"	"91.8187"	"31703"	"31703"	"31693"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.0"	""	"12.5"	""	"14.8"	""	"28.4"	""	"21.8"	"18.5"	""	"248"	"30"	"30.000"	"23.000"	"0.0128950100562803"	"23"	"7.476E-05"	"0.0001879"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"600.38116"	"1799.12894"	"1799.12941"	"-0.26"	"-0.00016"	"11/98"	"11"	"98"	"310031.714172363"	"HCD"	"MS2"	"33.29308"	"11.1"	"100.000"	"92.4504"	"31893"	"31893"	"31888"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"11.6"	""	"12.1"	""	"29.2"	""	"22.9"	"20.3"	""	"247"	"38"	"30.000"	"23.000"	"0.0019663777779082"	""	"0"	"0.0001388"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"600.38116"	"1799.12894"	"1799.12941"	"-0.26"	"-0.00016"	"11/98"	"11"	"98"	"1683717.128479"	"HCD"	"MS2"	"8.818989"	"41.2"	"100.000"	"92.3555"	"31888"	"31888"	"31882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.3"	""	"46.6"	""	"54.6"	""	"80.6"	""	"75.9"	"81.2"	""	"247"	"48"	"30.000"	"23.000"	"0.000175253603928603"	""	"0"	"2.619E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"600.38116"	"1799.12894"	"1799.12941"	"-0.26"	"-0.00016"	"9/98"	"9"	"98"	"4902953.51806641"	"HCD"	"MS2"	"6.427985"	"104.2"	"100.000"	"92.0817"	"31790"	"31790"	"31784"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.6"	""	"136.4"	""	"139.3"	""	"195.3"	"1.0"	"190.0"	"193.7"	""	"247"	"48"	"30.000"	"23.000"	"0.000207810246542203"	"19"	"0"	"1.08E-05"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"900.06830"	"1799.12932"	"1799.12941"	"-0.05"	"-0.00004"	"8/98"	"8"	"98"	"85475.7856445313"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"91.6663"	"31623"	"31623"	"31614"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.8"	""	"6.7"	""	"6.0"	""	"7.9"	""	"10.7"	"12.1"	""	"247"	"19"	"30.000"	"23.000"	"0.168138418284545"	"16"	"0.0006037"	"0.004002"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.8228"	"0.0000"	"1"	"1"	"1"	"900.06842"	"1799.12956"	"1799.12941"	"0.09"	"0.00008"	"10/98"	"10"	"98"	"1722212.13873291"	"HCD"	"MS2"	"0"	"99.8"	"100.000"	"91.9262"	"31715"	"31715"	"31710"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.7"	""	"115.6"	""	"144.6"	""	"191.8"	"1.9"	"174.2"	"195.0"	""	"246"	"79"	"30.000"	"23.000"	"1.46860536849106E-07"	""	"0"	"6.861E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"900.06866"	"1799.13005"	"1799.12941"	"0.36"	"0.00032"	"9/98"	"9"	"98"	"72898.2975463867"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"92.5995"	"31968"	"31968"	"31964"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"4.7"	""	"5.0"	""	"10.9"	""	"7.5"	"8.8"	""	"247"	"24"	"30.000"	"23.000"	"0.0517210052920629"	""	"0.00162"	"0.0226"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"600.38165"	"1799.13041"	"1799.12941"	"0.55"	"0.00033"	"12/98"	"12"	"98"	"2131866.55151367"	"HCD"	"MS2"	"7.024577"	"52.0"	"100.000"	"92.1936"	"31810"	"31810"	"31801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.8"	""	"71.0"	""	"64.1"	""	"94.0"	"1.1"	"99.9"	"102.4"	""	"243"	"44"	"30.000"	"23.000"	"0.000485932870959734"	"23"	"0"	"6.387E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"600.38171"	"1799.13059"	"1799.12941"	"0.66"	"0.00039"	"12/98"	"12"	"98"	"344497.081481934"	"HCD"	"MS2"	"38.45783"	"11.3"	"100.000"	"91.6686"	"31624"	"31624"	"31614"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"12.2"	""	"12.0"	""	"31.5"	""	"23.3"	"20.2"	""	"243"	"44"	"30.000"	"23.000"	"0.000523089831747429"	""	"0"	"6.37E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.8356"	"0.0000"	"1"	"1"	"1"	"900.06903"	"1799.13078"	"1799.12941"	"0.77"	"0.00069"	"10/98"	"10"	"98"	"558727.817993164"	"HCD"	"MS2"	"0.8221427"	"35.1"	"100.000"	"92.1981"	"31811"	"31811"	"31801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.7"	""	"41.9"	""	"49.1"	""	"68.5"	"1.1"	"70.7"	"60.9"	""	"243"	"73"	"30.000"	"23.000"	"6.20263574970119E-07"	""	"0"	"8.301E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILDLISESPIK"	"[K].iILDLISESPIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"600.38184"	"1799.13095"	"1799.12941"	"0.86"	"0.00052"	"8/98"	"8"	"98"	"4926690.04901123"	"HCD"	"MS2"	"6.617682"	"107.6"	"100.000"	"91.9218"	"31714"	"31714"	"31710"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.3"	""	"120.2"	""	"154.2"	""	"206.5"	"1.9"	"202.8"	"197.9"	""	"243"	"48"	"30.000"	"23.000"	"0.000202570536324954"	"20"	"0"	"1.156E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTIYFSPANK"	"[K].gFPTIYFSPANk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.67401"	"1800.00748"	"1800.00963"	"-1.19"	"-0.00072"	"13/98"	"13"	"98"	"12940340.2952881"	"HCD"	"MS2"	"1.168099"	"300.5"	"91.951"	"62.3300"	"19851"	"19851"	"19833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"406.0"	""	"404.6"	""	"406.7"	""	"508.8"	""	"574.3"	"548.5"	""	"922"	"39"	"36.000"	"29.000"	"0.00564548067861188"	"15"	"0"	"9.405E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTIYFSPANK"	"[K].gFPTIYFSPANk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9841"	"0.0000"	"1"	"1"	"1"	"900.50751"	"1800.00774"	"1800.00963"	"-1.05"	"-0.00094"	"11/98"	"11"	"98"	"2926052.30377197"	"HCD"	"MS2"	"0"	"199.1"	"100.000"	"62.7343"	"20069"	"20069"	"20051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"261.8"	""	"243.1"	""	"278.1"	""	"316.5"	"1.1"	"384.3"	"403.5"	""	"922"	"63"	"36.000"	"29.000"	"2.14141541877688E-05"	"17"	"0"	"1.233E-05"	"1.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTIYFSPANK"	"[K].gFPTIYFSPANk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"600.67426"	"1800.00821"	"1800.00963"	"-0.79"	"-0.00047"	"13/98"	"13"	"98"	"21689023.4208984"	"HCD"	"MS2"	"3.797119"	"168.8"	"39.224"	"62.7298"	"20068"	"20068"	"20051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.7"	""	"235.6"	""	"235.7"	""	"280.2"	"0.7"	"304.8"	"333.6"	""	"930"	"43"	"36.000"	"29.000"	"0.00212057165917353"	"17"	"0"	"4.987E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTIYFSPANK"	"[K].gFPTIYFSPANk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.50781"	"1800.00835"	"1800.00963"	"-0.71"	"-0.00064"	"9/98"	"9"	"98"	"1603079.67803955"	"HCD"	"MS2"	"0"	"120.0"	"100.000"	"62.3047"	"19841"	"19841"	"19817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.8"	""	"150.7"	""	"171.9"	""	"202.4"	""	"212.1"	"228.2"	""	"930"	"51"	"36.000"	"29.000"	"0.000343125467010032"	"16"	"0"	"2.669E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTIYFSPANK"	"[K].gFPTIYFSPANk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"600.67438"	"1800.00858"	"1800.00963"	"-0.58"	"-0.00035"	"8/98"	"8"	"98"	"10971270.1080933"	"HCD"	"MS2"	"28.97539"	"277.7"	"100.000"	"62.4229"	"19942"	"19942"	"19923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"379.5"	""	"371.5"	""	"393.9"	""	"479.2"	""	"494.6"	"512.0"	""	"916"	"42"	"36.000"	"29.000"	"0.00277246120637292"	"17"	"0"	"6.197E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTIYFSPANK"	"[K].gFPTIYFSPANk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.50830"	"1800.00932"	"1800.00963"	"-0.17"	"-0.00015"	"16/98"	"16"	"98"	"2347854.88232422"	"HCD"	"MS2"	"0"	"163.9"	"100.000"	"62.4369"	"19948"	"19948"	"19923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.7"	""	"222.7"	""	"221.2"	""	"288.0"	""	"315.6"	"295.5"	""	"914"	"37"	"36.000"	"29.000"	"0.0097704867490252"	"15"	"0"	"5.701E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTIYFSPANK"	"[K].gFPTIYFSPANk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9365"	"0.0000"	"1"	"1"	"1"	"900.50897"	"1800.01067"	"1800.00963"	"0.58"	"0.00052"	"10/98"	"10"	"98"	"3866851.38922119"	"HCD"	"MS2"	"0"	"249.6"	"100.000"	"62.5999"	"19962"	"19962"	"19945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"337.3"	""	"336.5"	""	"350.4"	""	"404.6"	"5.4"	"445.5"	"485.8"	""	"916"	"63"	"36.000"	"29.000"	"2.52269924953675E-05"	"20"	"0"	"1.206E-05"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPTIYFSPANK"	"[K].gFPTIYFSPANk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"600.67535"	"1800.01151"	"1800.00963"	"1.05"	"0.00063"	"12/98"	"12"	"98"	"19193884.2041016"	"HCD"	"MS2"	"3.724185"	"186.4"	"46.614"	"62.6392"	"19978"	"19978"	"19961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.8"	""	"226.0"	""	"274.7"	""	"292.8"	""	"354.6"	"366.8"	""	"917"	"38"	"36.000"	"29.000"	"0.00659689148130305"	"17"	"0"	"0.0001211"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"900.53174"	"1800.05620"	"1800.05809"	"-1.05"	"-0.00094"	"13/134"	"13"	"134"	"1385634.25860596"	"HCD"	"MS2"	"49.05302"	"59.7"	"100.000"	"82.5457"	"28083"	"28083"	"28064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.3"	""	"99.6"	""	"75.0"	""	"97.3"	""	"108.8"	"117.8"	""	"721"	"58"	"35.000"	"28.000"	"6.03816906807531E-05"	"28"	"0"	"2.927E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"600.69037"	"1800.05655"	"1800.05809"	"-0.85"	"-0.00051"	"15/134"	"15"	"134"	"3826331.04382324"	"HCD"	"MS2"	"2.834183"	"28.9"	"100.000"	"82.9170"	"28286"	"28286"	"28269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.7"	""	"39.9"	""	"30.8"	""	"68.6"	""	"49.9"	"52.6"	""	"721"	"52"	"35.000"	"28.000"	"0.000206968984625742"	"18"	"0"	"5.456E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"900.53247"	"1800.05766"	"1800.05809"	"-0.23"	"-0.00021"	"8/134"	"8"	"134"	"104972.294433594"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"83.1894"	"28346"	"28346"	"28319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"8.8"	""	"7.6"	""	"8.6"	""	"12.0"	"11.5"	""	"722"	"23"	"35.000"	"28.000"	"0.168464036293458"	"24"	"0.0005564"	"0.003593"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6792"	"0.0000"	"1"	"1"	"1"	"900.53253"	"1800.05779"	"1800.05809"	"-0.17"	"-0.00015"	"11/134"	"11"	"134"	"1400977.78833008"	"HCD"	"MS2"	"41.78986"	"60.2"	"100.000"	"82.5638"	"28142"	"28142"	"28125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.5"	""	"90.3"	""	"80.8"	""	"96.6"	""	"101.8"	"122.5"	""	"704"	"53"	"35.000"	"28.000"	"0.000188600423444696"	""	"0"	"4.569E-05"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"900.53253"	"1800.05779"	"1800.05809"	"-0.17"	"-0.00015"	"13/134"	"13"	"134"	"1709705.9574585"	"HCD"	"MS2"	"0"	"57.8"	"100.000"	"82.8778"	"28270"	"28270"	"28253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.6"	""	"97.9"	""	"90.6"	""	"91.1"	"2.6"	"91.2"	"110.7"	""	"704"	"58"	"35.000"	"28.000"	"6.24514697273339E-05"	"27"	"0"	"4.161E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.69086"	"1800.05802"	"1800.05809"	"-0.04"	"-0.00002"	"16/134"	"16"	"134"	"5214985.25219727"	"HCD"	"MS2"	"48.03642"	"50.4"	"100.000"	"82.6075"	"28159"	"28159"	"28141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.5"	""	"55.8"	""	"58.2"	""	"97.7"	"1.0"	"98.3"	"102.7"	""	"704"	"41"	"35.000"	"28.000"	"0.00307994288880058"	"15"	"0"	"7.253E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"900.53284"	"1800.05840"	"1800.05809"	"0.17"	"0.00016"	"4/134"	"4"	"134"	"92163.2766113281"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"83.2187"	"28409"	"28409"	"28381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"6.1"	""	"4.9"	""	"6.0"	""	"8.8"	"9.9"	""	"704"	"11"	"35.000"	"28.000"	"2.96853834733025"	"18"	"0.0007076"	"0.006908"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"600.69116"	"1800.05893"	"1800.05809"	"0.47"	"0.00028"	"15/134"	"15"	"134"	"5262875.37213135"	"HCD"	"MS2"	"45.505"	"51.5"	"100.000"	"82.5849"	"28099"	"28099"	"28080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.1"	""	"69.3"	""	"60.3"	""	"102.6"	"1.5"	"89.7"	"99.3"	""	"711"	"41"	"35.000"	"28.000"	"0.00263535790782476"	"20"	"0"	"0.0001171"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8551"	"0.0000"	"1"	"1"	"1"	"900.53314"	"1800.05901"	"1800.05809"	"0.51"	"0.00046"	"12/134"	"12"	"134"	"1873468.10229492"	"HCD"	"MS2"	"0"	"64.8"	"100.000"	"82.8531"	"28209"	"28209"	"28192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.2"	""	"99.4"	""	"97.6"	""	"91.8"	"0.1"	"108.3"	"141.2"	""	"709"	"69"	"35.000"	"28.000"	"4.10786572756992E-06"	"27"	"0"	"2.078E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"600.69128"	"1800.05930"	"1800.05809"	"0.67"	"0.00040"	"9/134"	"9"	"134"	"3348530.20629883"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"82.8923"	"28225"	"28225"	"28208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.2"	""	"35.9"	""	"36.5"	""	"48.9"	"1.4"	"45.1"	"49.7"	""	"709"	"45"	"35.000"	"28.000"	"0.00102947603100765"	"21"	"0"	"6.855E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVKPSNILVNSR"	"[R].dVkPSNILVNSR.[G]"	"N-Term(TMT6plex); K3(TMT6plex)"	"2"	"2"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2;Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2; Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.69629"	"1800.07431"	"1800.07435"	"-0.02"	"-0.00001"	"16/126"	"16"	"126"	"6129075.16802979"	"HCD"	"MS2"	"31.77284"	"327.1"	"100.000"	"35.8156"	"9060"	"9060"	"9035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"625.2"	""	"478.8"	""	"485.5"	""	"465.7"	""	"497.4"	"537.3"	""	"617"	"11"	"34.000"	"27.000"	"2.38921464622077"	"13"	"0"	"0.000131"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DKLILPSIISSR"	"[R].dkLILPSIISSR.[I]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"600.71619"	"1800.13401"	"1800.13589"	"-1.05"	"-0.00063"	"9/128"	"9"	"128"	"8545704.37713623"	"HCD"	"MS2"	"25.42798"	"291.7"	"100.000"	"54.5576"	"16680"	"16680"	"16656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"606.4"	""	"466.7"	""	"454.6"	""	"428.4"	"1.1"	"365.9"	"425.2"	""	"258"	"21"	"31.000"	"24.000"	"0.111068194031813"	"20"	"0"	"1.769E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIVGAGVSGLASIK"	"[R].vAIVGAGVSGLASIk.[C]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9672"	"0.0000"	"1"	"1"	"1"	"600.71680"	"1800.13584"	"1800.13589"	"-0.03"	"-0.00002"	"16/120"	"16"	"120"	"9636814.45050049"	"HCD"	"MS2"	"48.14109"	"185.9"	"100.000"	"63.4067"	"20344"	"20344"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.9"	""	"277.4"	""	"272.1"	""	"332.4"	""	"343.9"	"357.7"	""	"229"	"61"	"30.000"	"23.000"	"9.22158315172931E-06"	"18"	"0"	"1.842E-06"	"1.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DKLILPSIISSR"	"[R].dkLILPSIISSR.[I]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"1"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"600.71680"	"1800.13584"	"1800.13589"	"-0.03"	"-0.00002"	"9/128"	"9"	"128"	"7536778.55682373"	"HCD"	"MS2"	"31.54913"	"247.5"	"100.000"	"54.7157"	"16798"	"16798"	"16773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"531.5"	""	"397.5"	""	"374.8"	""	"338.1"	"3.6"	"338.8"	"348.8"	""	"229"	"23"	"30.000"	"23.000"	"0.0605069813282581"	"15"	"0"	"1.034E-05"	"1.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIVGAGVSGLASIK"	"[R].vAIVGAGVSGLASIk.[C]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8986"	"0.0000"	"1"	"1"	"1"	"900.57208"	"1800.13689"	"1800.13589"	"0.55"	"0.00050"	"20/120"	"20"	"120"	"1231791.98114014"	"HCD"	"MS2"	"0"	"81.9"	"100.000"	"63.3576"	"20271"	"20271"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.8"	""	"124.9"	""	"125.7"	""	"135.0"	""	"166.5"	"152.9"	""	"229"	"69"	"30.000"	"23.000"	"1.42169189219331E-06"	""	"0"	"5.671E-07"	"1.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIVGAGVSGLASIK"	"[R].vAIVGAGVSGLASIk.[C]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9386"	"0.0000"	"1"	"1"	"1"	"900.57379"	"1800.14031"	"1800.13589"	"2.45"	"0.00221"	"14/120"	"14"	"120"	"1331471.01184082"	"HCD"	"MS2"	"12.80649"	"84.1"	"100.000"	"63.4505"	"20362"	"20362"	"20339"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.8"	""	"134.0"	""	"131.2"	""	"145.1"	"1.6"	"143.4"	"147.9"	""	"222"	"114"	"30.000"	"23.000"	"4.11455601178659E-11"	""	"0"	"6.798E-08"	"1.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIVGAGVSGLASIK"	"[R].vAIVGAGVSGLASIk.[C]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9692"	"0.0000"	"1"	"1"	"1"	"600.71899"	"1800.14243"	"1800.13589"	"3.63"	"0.00218"	"16/120"	"16"	"120"	"7276223.29858398"	"HCD"	"MS2"	"14.07783"	"160.8"	"100.000"	"63.3482"	"20267"	"20267"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.3"	""	"250.5"	""	"235.7"	""	"272.8"	""	"328.8"	"285.3"	""	"199"	"65"	"29.000"	"22.000"	"3.24207517496998E-06"	"18"	"0"	"3.331E-06"	"1.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPMMVQSGSIGYFR"	"[K].vPMMVQSGSIGYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"600.98254"	"1800.93308"	"1800.93381"	"-0.41"	"-0.00024"	"15/124"	"15"	"124"	"4142821.24975586"	"HCD"	"MS2"	"12.85928"	"66.0"	"100.000"	"61.8490"	"19708"	"19708"	"19683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.4"	""	"89.1"	""	"103.5"	""	"95.2"	""	"121.8"	"123.3"	""	"907"	"47"	"36.000"	"29.000"	"0.000878167360649786"	"17"	"0"	"8.698E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPMMVQSGSIGYFR"	"[K].vPMMVQSGSIGYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"900.97028"	"1800.93328"	"1800.93381"	"-0.30"	"-0.00027"	"13/124"	"13"	"124"	"868187.618408203"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"61.8212"	"19697"	"19697"	"19667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.3"	""	"53.4"	""	"47.7"	""	"34.1"	""	"54.1"	"49.7"	""	"909"	"53"	"36.000"	"29.000"	"0.00025207738653937"	"16"	"0"	"1.266E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPMMVQSGSIGYFR"	"[K].vPMMVQSGSIGYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.9848"	"0.0000"	"1"	"1"	"1"	"900.97052"	"1800.93376"	"1800.93381"	"-0.03"	"-0.00002"	"12/124"	"12"	"124"	"812465.731018066"	"HCD"	"MS2"	"0"	"30.7"	"100.000"	"61.6853"	"19588"	"19588"	"19561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.4"	""	"52.0"	""	"46.4"	""	"36.1"	"0.8"	"47.1"	"58.4"	""	"919"	"66"	"36.000"	"29.000"	"1.22260316497755E-05"	"18"	"0"	"1.675E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPMMVQSGSIGYFR"	"[K].vPMMVQSGSIGYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"600.98297"	"1800.93436"	"1800.93381"	"0.30"	"0.00018"	"9/124"	"9"	"124"	"3954748.03198242"	"HCD"	"MS2"	"21.96783"	"63.7"	"100.000"	"61.7154"	"19600"	"19600"	"19577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.5"	""	"82.1"	""	"86.6"	""	"101.6"	""	"114.7"	"123.7"	""	"926"	"36"	"36.000"	"29.000"	"0.0126934884160261"	"15"	"0"	"1.6E-05"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNTYSFIHAK"	"[R].fDNTYSFIHAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"600.99359"	"1800.96622"	"1800.96849"	"-1.26"	"-0.00076"	"8/104"	"8"	"104"	"4032598.65625"	"HCD"	"MS2"	"67.65774"	"182.3"	"100.000"	"46.3444"	"13400"	"13400"	"13376"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.4"	""	"252.0"	""	"260.1"	""	"298.3"	""	"337.2"	"312.2"	""	"1006"	"20"	"37.000"	"30.000"	"0.550260052234863"	"15"	"0.0001889"	"0.0005895"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNTYSFIHAK"	"[R].fDNTYSFIHAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"600.99445"	"1800.96878"	"1800.96849"	"0.16"	"0.00010"	"8/104"	"8"	"104"	"3315750.80828857"	"HCD"	"MS2"	"28.19741"	"153.9"	"100.000"	"46.1034"	"13253"	"13253"	"13229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.6"	""	"214.1"	""	"209.6"	""	"235.7"	"1.1"	"289.3"	"293.4"	""	"1004"	"26"	"37.000"	"30.000"	"0.11768028652906"	"22"	"7.476E-05"	"0.0001983"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSHLLGINVTDFTR"	"[K].vSHLLGINVTDFTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"601.01025"	"1801.01621"	"1801.01695"	"-0.41"	"-0.00025"	"9/138"	"9"	"138"	"6136588.57714844"	"HCD"	"MS2"	"19.92883"	"64.6"	"100.000"	"57.7505"	"17985"	"17985"	"17963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.7"	""	"91.2"	""	"103.0"	""	"106.2"	""	"116.8"	"112.3"	""	"978"	"60"	"36.000"	"29.000"	"4.62709971907872E-05"	"18"	"0"	"1.857E-06"	"1.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSHLLGINVTDFTR"	"[K].vSHLLGINVTDFTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.9531"	"0.0000"	"1"	"1"	"1"	"601.01099"	"1801.01841"	"1801.01695"	"0.81"	"0.00049"	"9/138"	"9"	"138"	"6594693.7232666"	"HCD"	"MS2"	"22.04822"	"67.1"	"100.000"	"57.9356"	"18115"	"18115"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.5"	""	"92.7"	""	"103.4"	""	"102.9"	"0.2"	"121.3"	"126.4"	""	"943"	"64"	"36.000"	"29.000"	"1.70797573753474E-05"	"19"	"0"	"2.38E-06"	"1.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVVDPLFGMQPIR"	"[R].lAVVDPLFGmQPIR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"901.01617"	"1801.02507"	"1801.02434"	"0.40"	"0.00036"	"6/110"	"6"	"110"	"283445.505310059"	"HCD"	"MS2"	"23.16015"	"15.2"	"100.000"	"68.9563"	"22601"	"22601"	"22570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.8"	""	"21.9"	""	"18.2"	""	"25.8"	""	"28.6"	"25.1"	""	"949"	"11"	"36.000"	"29.000"	"3.56645063211638"	"19"	"0.0008731"	"0.009017"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDGRPFPQVIK"	"[K].aDDGRPFPQVIk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.01703"	"1801.03653"	"1801.03724"	"-0.39"	"-0.00024"	"7/104"	"7"	"104"	"7361136.38391113"	"HCD"	"MS2"	"0"	"414.6"	"100.000"	"38.7899"	"10324"	"10324"	"10302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"687.7"	""	"483.1"	""	"502.6"	""	"617.3"	"5.5"	"690.9"	"941.8"	""	"874"	"22"	"36.000"	"29.000"	"0.273830258861811"	"14"	"0.0001859"	"0.0003555"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDGRPFPQVIK"	"[K].aDDGRPFPQVIk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"601.01715"	"1801.03690"	"1801.03724"	"-0.19"	"-0.00011"	"10/104"	"10"	"104"	"5163401.88250732"	"HCD"	"MS2"	"2.277982"	"317.7"	"100.000"	"38.7315"	"10257"	"10257"	"10230"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"477.4"	""	"420.4"	""	"413.9"	""	"465.9"	"1.8"	"547.1"	"684.2"	""	"865"	"8"	"36.000"	"29.000"	"7.65572124472285"	"16"	"0.0004166"	"0.002278"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.3103"	"0.0000"	"1"	"1"	"1"	"901.02313"	"1801.03899"	"1801.04210"	"-1.73"	"-0.00156"	"8/134"	"8"	"134"	"135499.489501953"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"86.7197"	"29828"	"29828"	"29801"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.9"	""	"7.3"	""	"7.3"	""	"7.9"	""	"9.4"	"11.8"	""	"837"	"29"	"36.000"	"29.000"	"0.048718674330829"	"16"	"0.0006037"	"0.003781"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.4400"	"0.0000"	"1"	"1"	"1"	"601.01831"	"1801.04038"	"1801.04210"	"-0.96"	"-0.00057"	"10/134"	"10"	"134"	"198311.469238281"	"HCD"	"MS2"	"35.22401"	"6.5"	"100.000"	"88.1686"	"30348"	"30348"	"30338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.2"	""	"8.6"	""	"8.4"	""	"12.2"	""	"12.0"	"9.3"	""	"820"	"25"	"36.000"	"29.000"	"0.142162108685538"	"15"	"0.0001308"	"0.0002119"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"601.01837"	"1801.04056"	"1801.04210"	"-0.85"	"-0.00051"	"14/134"	"14"	"134"	"591382.668823242"	"HCD"	"MS2"	"38.90286"	"12.2"	"100.000"	"85.6532"	"29397"	"29397"	"29374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.8"	""	"12.6"	""	"15.6"	""	"30.2"	""	"20.8"	"21.5"	""	"820"	"36"	"36.000"	"29.000"	"0.0112404541049043"	"19"	"0"	"0.0001007"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.4706"	"0.0000"	"1"	"1"	"1"	"601.01837"	"1801.04056"	"1801.04210"	"-0.85"	"-0.00051"	"12/134"	"12"	"134"	"595284.806945801"	"HCD"	"MS2"	"11.31565"	"10.2"	"100.000"	"86.7745"	"29798"	"29798"	"29777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"12.6"	""	"15.3"	""	"17.8"	"1.5"	"20.2"	"21.1"	""	"820"	"17"	"36.000"	"29.000"	"0.803126316137457"	"14"	"0.0002277"	"0.001333"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"901.02405"	"1801.04082"	"1801.04210"	"-0.71"	"-0.00064"	"4/134"	"4"	"134"	"89660.6124267578"	"HCD"	"MS2"	"17.0823"	"2.7"	"100.000"	"88.2322"	"30417"	"30417"	"30405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	"4.2"	""	"4.8"	""	"2.2"	""	"5.7"	"5.1"	""	"821"	"10"	"36.000"	"29.000"	"4.09555876199158"	"13"	"0.005231"	"0.1586"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"901.02405"	"1801.04082"	"1801.04210"	"-0.71"	"-0.00064"	"7/134"	"7"	"134"	"151831.20526123"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"85.7231"	"29425"	"29425"	"29405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"8.6"	""	"12.9"	""	"13.9"	""	"11.4"	"12.4"	""	"821"	"30"	"36.000"	"29.000"	"0.0371803232668711"	"16"	"0.0003839"	"0.00183"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPNFSSLnLR.[E]"	"N-Term(TMT6plex); N12(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"901.02423"	"1801.04119"	"1801.04210"	"-0.51"	"-0.00046"	"7/134"	"7"	"134"	"86597.020690918"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"85.2201"	"29174"	"29174"	"29147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"7.1"	""	"7.7"	""	"4.2"	""	"7.7"	"6.7"	""	"829"	"11"	"36.000"	"29.000"	"3.51985306902552"	"13"	"0.0006037"	"0.00517"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"2"	"2"	"901.02423"	"1801.04119"	"1801.04210"	"-0.51"	"-0.00046"	"7/134"	"7"	"134"	"86597.020690918"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"85.2201"	"29174"	"29174"	"29147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"7.1"	""	"7.7"	""	"4.2"	""	"7.7"	"6.7"	""	"829"	"11"	"36.000"	"29.000"	"3.51985306902552"	"13"	"0.0006037"	"0.00517"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.2812"	"0.0000"	"1"	"1"	"1"	"901.02423"	"1801.04119"	"1801.04210"	"-0.51"	"-0.00046"	"10/134"	"10"	"134"	"137404.614196777"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"86.6449"	"29746"	"29746"	"29716"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"10.1"	""	"5.0"	""	"7.1"	""	"9.7"	"8.2"	""	"829"	"32"	"36.000"	"29.000"	"0.0253819237369918"	"15"	"0.0001889"	"0.0006465"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.2069"	"0.0000"	"1"	"1"	"1"	"901.02435"	"1801.04143"	"1801.04210"	"-0.37"	"-0.00034"	"11/134"	"11"	"134"	"161201.643859863"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"85.5371"	"29350"	"29350"	"29326"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"14.6"	""	"16.6"	""	"11.4"	""	"17.6"	"14.6"	""	"829"	"29"	"36.000"	"29.000"	"0.05540188416085"	"22"	"0.0001889"	"0.0005919"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"901.02448"	"1801.04167"	"1801.04210"	"-0.24"	"-0.00021"	"5/134"	"5"	"134"	"70929.8643188477"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"88.1477"	"30340"	"30340"	"30324"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.4"	""	"6.8"	""	"5.1"	""	"2.6"	""	"8.1"	"6.3"	""	"825"	"5"	"36.000"	"29.000"	"12.3147033030366"	"13"	"0.004291"	"0.1109"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"901.02478"	"1801.04228"	"1801.04210"	"0.10"	"0.00009"	"7/134"	"7"	"134"	"105094.227539063"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"85.4269"	"29309"	"29309"	"29282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.0"	""	"10.6"	""	"8.2"	""	"5.8"	""	"9.3"	"9.4"	""	"815"	"4"	"36.000"	"29.000"	"16.9483573776314"	"13"	"0.001454"	"0.02011"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.4571"	"0.0000"	"1"	"1"	"1"	"601.01898"	"1801.04239"	"1801.04210"	"0.16"	"0.00010"	"14/134"	"14"	"134"	"357449.533752441"	"HCD"	"MS2"	"16.84753"	"9.0"	"100.000"	"85.6724"	"29357"	"29357"	"29336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.2"	""	"12.2"	""	"13.9"	""	"12.6"	""	"19.1"	"20.3"	""	"811"	"35"	"36.000"	"29.000"	"0.0142886388207729"	"16"	"0.0001889"	"0.0004266"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPLPNFSSLNLR"	"[R].iSLPLPnFSSLNLR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"901.02484"	"1801.04241"	"1801.04210"	"0.17"	"0.00015"	"12/134"	"12"	"134"	"171495.381347656"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"85.6332"	"29341"	"29341"	"29321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.7"	""	"9.9"	""	"16.6"	""	"9.3"	""	"17.4"	"15.0"	""	"811"	"28"	"36.000"	"29.000"	"0.0648620780603248"	"14"	"0.0001889"	"0.0005027"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"601.30591"	"1801.90317"	"1801.90304"	"0.07"	"0.00004"	"12/122"	"12"	"122"	"6896995.6194458"	"HCD"	"MS2"	"1.999504"	"82.2"	"100.000"	"30.7730"	"7008"	"7008"	"6984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.6"	""	"79.5"	""	"94.0"	""	"167.6"	"3.2"	"177.3"	"154.5"	""	"812"	"64"	"36.000"	"29.000"	"1.46394929066787E-05"	"27"	"0"	"4.297E-07"	"1.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"601.30609"	"1801.90372"	"1801.90304"	"0.38"	"0.00023"	"10/122"	"10"	"122"	"7923714.39367676"	"HCD"	"MS2"	"1.292632"	"85.2"	"100.000"	"30.8532"	"7082"	"7082"	"7056"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.7"	""	"77.4"	""	"89.6"	""	"182.9"	""	"181.2"	"177.0"	""	"822"	"65"	"36.000"	"29.000"	"1.3703825564569E-05"	"21"	"0"	"1.876E-07"	"1.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDAVDTYIPVPTR"	"[K].lLDAVDTYIPVPTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"901.51599"	"1802.02471"	"1802.02612"	"-0.78"	"-0.00071"	"10/124"	"10"	"124"	"799806.41394043"	"HCD"	"MS2"	"0"	"37.1"	"100.000"	"74.8706"	"25015"	"25015"	"24991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.6"	""	"59.4"	""	"59.3"	""	"48.3"	""	"61.7"	"69.5"	""	"967"	"44"	"36.000"	"29.000"	"0.00202953468759652"	"16"	"0"	"9.279E-06"	"1.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDAVDTYIPVPTR"	"[K].lLDAVDTYIPVPTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.34717"	"1802.02695"	"1802.02612"	"0.46"	"0.00028"	"8/124"	"8"	"124"	"3544056.93334961"	"HCD"	"MS2"	"18.8098"	"42.0"	"100.000"	"74.9240"	"24985"	"24985"	"24961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.3"	""	"65.5"	""	"69.9"	""	"51.4"	"1.2"	"71.8"	"68.5"	""	"951"	"48"	"36.000"	"29.000"	"0.000778306255938923"	"15"	"0"	"9.962E-06"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDAVDTYIPVPTR"	"[K].lLDAVDTYIPVPTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.34717"	"1802.02695"	"1802.02612"	"0.46"	"0.00028"	"15/124"	"15"	"124"	"3755258.91876221"	"HCD"	"MS2"	"17.74715"	"45.0"	"100.000"	"74.9121"	"25032"	"25032"	"25007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.0"	""	"59.0"	""	"72.2"	""	"69.7"	""	"78.9"	"77.8"	""	"951"	"38"	"36.000"	"29.000"	"0.00684148723960654"	"15"	"0"	"2.428E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDAVDTYIPVPTR"	"[K].lLDAVDTYIPVPTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"901.51788"	"1802.02849"	"1802.02612"	"1.32"	"0.00119"	"10/124"	"10"	"124"	"772265.09185791"	"HCD"	"MS2"	"0"	"39.7"	"100.000"	"74.8848"	"24969"	"24969"	"24945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.9"	""	"60.2"	""	"66.8"	""	"58.1"	""	"65.1"	"65.7"	""	"936"	"46"	"36.000"	"29.000"	"0.00128010576391154"	"15"	"0"	"1.077E-05"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLYIVTEYMAK"	"[K].gGLYIVTEYMAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"601.67456"	"1803.00913"	"1803.01266"	"-1.96"	"-0.00118"	"12/90"	"12"	"90"	"720667.230712891"	"HCD"	"MS2"	"9.818801"	"33.3"	"100.000"	"69.3366"	"22756"	"22756"	"22730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.6"	""	"49.2"	""	"48.4"	""	"47.7"	""	"68.5"	"61.3"	""	"1130"	"25"	"37.000"	"30.000"	"0.168674117968865"	"15"	"0.0001889"	"0.0007708"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTVPVLYPAEK"	"[K].eVTVPVLYPAEk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"902.03699"	"1803.06670"	"1803.06681"	"-0.06"	"-0.00006"	"13/108"	"13"	"108"	"510916.52142334"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"56.7054"	"17558"	"17558"	"17531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.2"	""	"36.0"	""	"43.1"	""	"54.6"	"0.5"	"62.6"	"60.5"	""	"755"	"31"	"35.000"	"28.000"	"0.0291016059571822"	"15"	"0.0001308"	"0.0002075"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTVPVLYPAEK"	"[K].eVTVPVLYPAEk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"902.03735"	"1803.06743"	"1803.06681"	"0.35"	"0.00031"	"10/108"	"10"	"108"	"555178.941162109"	"HCD"	"MS2"	"29.93809"	"32.1"	"100.000"	"56.9035"	"17693"	"17693"	"17669"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.6"	""	"38.9"	""	"39.1"	""	"59.1"	""	"72.0"	"64.5"	""	"736"	"25"	"35.000"	"28.000"	"0.112940009172795"	"14"	"7.476E-05"	"0.0001895"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFIAIKPDGVQR"	"[R].tFIAIkPDGVQR.[G]"	"N-Term(TMT6plex); K6(TMT6plex)"	"2"	"2"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1;Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.70111"	"1803.08878"	"1803.08927"	"-0.27"	"-0.00017"	"7/114"	"7"	"114"	"40594199.4094238"	"HCD"	"MS2"	"14.27387"	"980.5"	"49.293"	"40.5159"	"10985"	"10985"	"10965"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1518.3"	""	"1192.8"	""	"1375.0"	""	"1763.1"	"13.0"	"1653.3"	"1763.9"	""	"578"	"23"	"34.000"	"27.000"	"0.12998637806416"	"14"	"0"	"6.158E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFIAIKPDGVQR"	"[R].tFIAIkPDGVQR.[G]"	"N-Term(TMT6plex); K6(TMT6plex)"	"2"	"2"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1;Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.70142"	"1803.08969"	"1803.08927"	"0.23"	"0.00014"	"7/114"	"7"	"114"	"39251231.7158203"	"HCD"	"MS2"	"9.664834"	"1232.8"	"61.667"	"40.7035"	"11106"	"11106"	"11085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1847.7"	""	"1526.8"	""	"1764.6"	""	"2166.4"	"2.3"	"2118.9"	"2243.6"	""	"565"	"21"	"34.000"	"27.000"	"0.23714744619173"	"14"	"0"	"6.959E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPTTSLVSIAVTK"	"[K].gAPTTSLVSIAVTk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.70361"	"1803.09629"	"1803.09917"	"-1.60"	"-0.00096"	"14/122"	"14"	"122"	"7070592.65155029"	"HCD"	"MS2"	"18.70378"	"201.1"	"100.000"	"53.9103"	"16416"	"16416"	"16403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"260.9"	""	"279.5"	""	"283.6"	""	"331.3"	""	"362.1"	"391.5"	""	"554"	"38"	"34.000"	"27.000"	"0.00428035479752141"	"15"	"0.0001308"	"0.0002451"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPTTSLVSIAVTK"	"[K].gAPTTSLVSIAVTk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"902.05206"	"1803.09685"	"1803.09917"	"-1.29"	"-0.00116"	"11/122"	"11"	"122"	"735701.49987793"	"HCD"	"MS2"	"0"	"52.2"	"100.000"	"53.8232"	"16382"	"16382"	"16366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.4"	""	"73.5"	""	"76.5"	""	"83.6"	""	"92.5"	"104.3"	""	"552"	"92"	"34.000"	"27.000"	"1.84888152198961E-08"	"18"	"0"	"1.129E-06"	"1.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPTTSLVSIAVTK"	"[K].gAPTTSLVSIAVTk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"601.70398"	"1803.09739"	"1803.09917"	"-0.99"	"-0.00060"	"14/122"	"14"	"122"	"7459420.41741943"	"HCD"	"MS2"	"44.39273"	"220.7"	"100.000"	"54.0936"	"16544"	"16544"	"16529"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"309.7"	""	"280.6"	""	"316.8"	""	"350.2"	"0.6"	"407.4"	"426.1"	""	"541"	"39"	"34.000"	"27.000"	"0.00346870422608453"	"16"	"0.0001308"	"0.0002569"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPTTSLVSIAVTK"	"[K].gAPTTSLVSIAVTk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"902.05322"	"1803.09917"	"1803.09917"	"0.00"	"0.00000"	"13/122"	"13"	"122"	"950892.684143066"	"HCD"	"MS2"	"0"	"63.3"	"100.000"	"54.0432"	"16524"	"16524"	"16507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.0"	""	"89.5"	""	"96.7"	""	"104.9"	""	"102.2"	"118.7"	""	"500"	"105"	"33.000"	"26.000"	"8.58894869749686E-10"	"19"	"0"	"8.532E-07"	"1.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGKK"	"[K].iLDLIESGkk.[E]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.72284"	"1803.15396"	"1803.15585"	"-1.04"	"-0.00063"	"8/82"	"8"	"82"	"9105263.92663574"	"HCD"	"MS2"	"15.28618"	"523.6"	"100.000"	"58.1029"	"18129"	"18129"	"18107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1207.1"	""	"1023.0"	""	"1066.5"	""	"576.7"	""	"474.9"	"568.3"	""	"256"	"7"	"31.000"	"24.000"	"2.3999929703263"	"13"	"0.0001889"	"0.000812"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGKK"	"[K].iLDLIESGkk.[E]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.72296"	"1803.15433"	"1803.15585"	"-0.84"	"-0.00051"	"9/82"	"9"	"82"	"3992222.21551514"	"HCD"	"MS2"	"3.382897"	"243.1"	"100.000"	"58.4059"	"18253"	"18253"	"18234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"535.3"	""	"445.5"	""	"492.9"	""	"273.5"	""	"249.8"	"289.9"	""	"256"	"4"	"31.000"	"24.000"	"5.70439997948804"	"13"	"0.0003146"	"0.00145"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGKK"	"[K].iLDLIESGkk.[E]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.72314"	"1803.15488"	"1803.15585"	"-0.54"	"-0.00032"	"12/82"	"12"	"82"	"13749354.1870117"	"HCD"	"MS2"	"6.567637"	"807.1"	"100.000"	"58.3016"	"18264"	"18264"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1958.0"	""	"1565.2"	""	"1687.7"	""	"807.7"	"0.7"	"693.4"	"858.5"	""	"256"	"14"	"31.000"	"24.000"	"0.541015826259972"	"13"	"7.476E-05"	"0.0001871"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKTEAEIALK"	"[R].lkTEAEIALk.[E]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.72321"	"1803.15506"	"1803.15585"	"-0.43"	"-0.00026"	"12/94"	"12"	"94"	"6264257.12817383"	"HCD"	"MS2"	"20.2604"	"253.9"	"62.564"	"41.7240"	"11481"	"11481"	"11451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.4"	""	"383.3"	""	"419.5"	""	"325.4"	""	"455.0"	"497.1"	""	"256"	"4"	"31.000"	"24.000"	"5.29919583769255"	"13"	"0.0001308"	"0.0002894"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKTEAEIALK"	"[R].lkTEAEIALk.[E]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.72327"	"1803.15525"	"1803.15585"	"-0.33"	"-0.00020"	"10/94"	"10"	"94"	"8499272.76977539"	"HCD"	"MS2"	"41.78433"	"475.9"	"100.000"	"41.9443"	"11615"	"11615"	"11586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"709.5"	""	"732.8"	""	"780.1"	""	"579.2"	"3.0"	"796.5"	"902.9"	""	"256"	"20"	"31.000"	"24.000"	"0.121118356654822"	"14"	"0"	"0.0001497"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDLIESGKK"	"[K].iLDLIESGkk.[E]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"451.54480"	"1803.15737"	"1803.15585"	"0.84"	"0.00038"	"6/82"	"6"	"82"	"1628268.11260986"	"HCD"	"MS2"	"0"	"88.8"	"100.000"	"58.4739"	"18335"	"18335"	"18309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.1"	""	"166.3"	""	"181.0"	""	"94.8"	""	"87.3"	"109.3"	""	"229"	"5"	"30.000"	"23.000"	"3.38692427420152"	"13"	"0.002456"	"0.03708"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISQGLGLQDFDLIR"	"[K].iSQGLGLQDFDLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P09217"	"Protein kinase C zeta type OS=Rattus norvegicus OX=10116 GN=Prkcz PE=1 SV=2"	"P09217"	"Protein kinase C zeta type OS=Rattus norvegicus OX=10116 GN=Prkcz PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"902.51147"	"1804.01567"	"1804.01661"	"-0.52"	"-0.00047"	"10/144"	"10"	"144"	"408194.175476074"	"HCD"	"MS2"	"32.89906"	"24.3"	"100.000"	"74.5175"	"24871"	"24871"	"24847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.5"	""	"39.5"	""	"35.3"	""	"32.9"	"0.6"	"48.6"	"38.4"	""	"1085"	"58"	"37.000"	"30.000"	"9.64716579946115E-05"	"22"	"0"	"4.091E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISQGLGLQDFDLIR"	"[K].iSQGLGLQDFDLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P09217"	"Protein kinase C zeta type OS=Rattus norvegicus OX=10116 GN=Prkcz PE=1 SV=2"	"P09217"	"Protein kinase C zeta type OS=Rattus norvegicus OX=10116 GN=Prkcz PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"902.51172"	"1804.01616"	"1804.01661"	"-0.25"	"-0.00023"	"9/144"	"9"	"144"	"425889.159973145"	"HCD"	"MS2"	"100"	"28.3"	"100.000"	"74.4972"	"24811"	"24811"	"24785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.3"	""	"38.7"	""	"45.3"	""	"45.1"	""	"52.2"	"49.9"	""	"1086"	"38"	"37.000"	"30.000"	"0.00866562376949547"	"17"	"0.0001308"	"0.0002677"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIEHSFEVK"	"[K].kIEHSFEVk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"1"	"4"	"4"	"0.5625"	"0.0000"	"1"	"1"	"1"	"451.77850"	"1804.09218"	"1804.09358"	"-0.77"	"-0.00035"	"9/88"	"9"	"88"	"40427497.0187988"	"HCD"	"MS2"	"18.05359"	"319.4"	"19.550"	"31.9274"	"7478"	"7478"	"7460"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"523.8"	""	"598.4"	""	"433.5"	""	"478.4"	"6.2"	"500.0"	"477.6"	""	"573"	"16"	"34.000"	"27.000"	"0.780053924764323"	"20"	"0.0001889"	"0.000905"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIEHSFEVK"	"[K].kIEHSFEVk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"1"	"4"	"4"	"0.5625"	"0.0000"	"1"	"1"	"1"	"451.77866"	"1804.09279"	"1804.09358"	"-0.44"	"-0.00020"	"5/88"	"5"	"88"	"65869711.2670898"	"HCD"	"MS2"	"13.64435"	"468.1"	"19.530"	"32.0297"	"7563"	"7563"	"7546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"773.4"	""	"875.3"	""	"635.5"	""	"705.3"	"3.0"	"726.3"	"702.9"	""	"567"	"16"	"34.000"	"27.000"	"0.786236249668797"	"20"	"0.0002277"	"0.001214"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTVSWAVTPK"	"[R].kTVSWAVTPk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"902.56799"	"1804.12871"	"1804.12997"	"-0.70"	"-0.00063"	"8/102"	"8"	"102"	"316643.447875977"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"38.5815"	"10239"	"10239"	"10209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.9"	""	"66.1"	""	"40.1"	""	"29.4"	""	"33.6"	"34.0"	""	"333"	"63"	"32.000"	"25.000"	"8.94157940956469E-06"	"16"	"0"	"0.0001401"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTVSWAVTPK"	"[R].kTVSWAVTPk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"902.56836"	"1804.12944"	"1804.12997"	"-0.29"	"-0.00026"	"9/102"	"9"	"102"	"122522.330749512"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"38.5849"	"10197"	"10197"	"10167"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.5"	""	"10.3"	""	"14.4"	""	"12.5"	""	"10.7"	"10.6"	""	"333"	"18"	"32.000"	"25.000"	"0.241220513615202"	"14"	"0.003286"	"0.07483"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].AHFSVMGDILSSAIk.[N]"	"K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.6800"	"0.0000"	"1"	"1"	"1"	"452.00052"	"1804.98025"	"1804.98287"	"-1.45"	"-0.00066"	"14/128"	"14"	"128"	"2612206.73254395"	"HCD"	"MS2"	"14.16591"	"106.4"	"100.000"	"59.7448"	"18849"	"18849"	"18821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.9"	""	"141.1"	""	"125.5"	""	"197.4"	"1.4"	"191.8"	"224.6"	""	"1196"	"25"	"37.000"	"30.000"	"0.191734905605427"	"22"	"0.0001308"	"0.000291"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].AHFSVMGDILSSAIk.[N]"	"K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7656"	"0.0000"	"1"	"1"	"1"	"602.33173"	"1804.98062"	"1804.98287"	"-1.24"	"-0.00075"	"16/128"	"16"	"128"	"9644656.48754883"	"HCD"	"MS2"	"0"	"210.4"	"87.185"	"59.7242"	"18840"	"18840"	"18821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"336.7"	""	"341.7"	""	"260.3"	""	"335.6"	"3.8"	"256.3"	"454.0"	""	"1198"	"64"	"37.000"	"30.000"	"2.22037752347763E-05"	""	"0"	"3.223E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWVMGPDNIMK"	"[K].vGWVMGPDNIMk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"902.99536"	"1804.98345"	"1804.98540"	"-1.08"	"-0.00098"	"14/94"	"14"	"94"	"411131.622253418"	"HCD"	"MS2"	"0"	"36.1"	"100.000"	"64.7897"	"20909"	"20909"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.6"	""	"45.6"	""	"53.4"	""	"54.5"	""	"54.3"	"76.7"	""	"1177"	"42"	"37.000"	"30.000"	"0.00409021810901007"	"17"	"0"	"0.0001529"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].AHFSVMGDILSSAIk.[N]"	"K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"602.33325"	"1804.98520"	"1804.98287"	"1.29"	"0.00078"	"15/128"	"15"	"128"	"8706811.12103271"	"HCD"	"MS2"	"2.253006"	"224.7"	"100.000"	"59.5906"	"18732"	"18732"	"18713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"350.4"	""	"413.3"	""	"266.7"	""	"342.7"	"15.2"	"270.3"	"464.8"	""	"1165"	"54"	"37.000"	"30.000"	"0.000246772027723858"	"29"	"0"	"2.7E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWVMGPDNIMK"	"[K].vGWVMGPDNIMk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"902.99817"	"1804.98906"	"1804.98540"	"2.03"	"0.00183"	"15/94"	"15"	"94"	"356782.384887695"	"HCD"	"MS2"	"0"	"32.2"	"100.000"	"64.8233"	"20870"	"20870"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.6"	""	"42.1"	""	"52.9"	""	"50.6"	""	"50.3"	"67.3"	""	"1225"	"42"	"37.000"	"30.000"	"0.00406542630621169"	"15"	"0.0001308"	"0.0002121"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMGMTAENLAAK"	"[K].lPMGMTAENLAAk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"602.33966"	"1805.00443"	"1805.00653"	"-1.17"	"-0.00070"	"12/108"	"12"	"108"	"7465865.33068848"	"HCD"	"MS2"	"6.266985"	"189.2"	"100.000"	"55.6598"	"17185"	"17185"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"381.8"	""	"262.2"	""	"263.8"	""	"201.0"	""	"343.3"	"340.1"	""	"1170"	"47"	"37.000"	"30.000"	"0.00128871198088627"	"22"	"0"	"1.747E-05"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMGMTAENLAAK"	"[K].lPMGMTAENLAAk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"602.34003"	"1805.00553"	"1805.00653"	"-0.56"	"-0.00034"	"12/108"	"12"	"108"	"6455762.24530029"	"HCD"	"MS2"	"2.149431"	"164.1"	"100.000"	"55.4883"	"17061"	"17061"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.8"	""	"231.8"	""	"215.6"	""	"182.1"	"1.4"	"316.3"	"297.7"	""	"1140"	"39"	"37.000"	"30.000"	"0.00741096659478976"	"22"	"0"	"3.253E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMGMTAENLAAK"	"[K].lPMGMTAENLAAk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.9125"	"0.0000"	"1"	"1"	"1"	"903.00714"	"1805.00701"	"1805.00653"	"0.26"	"0.00024"	"10/108"	"10"	"108"	"1274665.19354248"	"HCD"	"MS2"	"7.286794"	"90.3"	"100.000"	"55.4517"	"17046"	"17046"	"17019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.5"	""	"121.0"	""	"118.5"	""	"92.0"	"0.3"	"176.1"	"165.8"	""	"1183"	"80"	"37.000"	"30.000"	"6.47075190649944E-07"	"25"	"0"	"3.732E-07"	"1.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMGMTAENLAAK"	"[K].lPMGMTAENLAAk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"903.00781"	"1805.00835"	"1805.00653"	"1.01"	"0.00091"	"12/108"	"12"	"108"	"1200901.80737305"	"HCD"	"MS2"	"0"	"83.9"	"100.000"	"55.6186"	"17168"	"17168"	"17141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.9"	""	"119.3"	""	"108.6"	""	"73.6"	"2.3"	"152.3"	"152.5"	""	"1180"	"92"	"37.000"	"30.000"	"3.80935995130446E-08"	"29"	"0"	"3.427E-07"	"1.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKETAESVLK"	"[K].lkETAESVLk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"602.38232"	"1805.13242"	"1805.13511"	"-1.49"	"-0.00090"	"10/96"	"10"	"96"	"7141081.95721436"	"HCD"	"MS2"	"0"	"351.2"	"100.000"	"44.1948"	"12478"	"12478"	"12454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"503.2"	""	"512.0"	""	"542.5"	""	"537.8"	""	"629.7"	"606.2"	""	"315"	"2"	"31.000"	"24.000"	"10.599382336478"	"13"	"0.0001889"	"0.0009667"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAGSAFDFENMK"	"[R].mAGSAFDFENMk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"903.45197"	"1805.89665"	"1805.89665"	"0.00"	"0.00000"	"11/102"	"11"	"102"	"1318093.01586914"	"HCD"	"MS2"	"0"	"132.7"	"100.000"	"58.1106"	"18186"	"18186"	"18165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"218.2"	""	"175.5"	""	"154.0"	""	"150.1"	"0.1"	"272.6"	"289.3"	""	"812"	"87"	"36.000"	"29.000"	"7.7718790555856E-08"	"21"	"0"	"1.392E-06"	"1.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAGSAFDFENMK"	"[R].mAGSAFDFENMk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"602.63745"	"1805.89780"	"1805.89665"	"0.64"	"0.00038"	"10/102"	"10"	"102"	"4575844.49737549"	"HCD"	"MS2"	"35.15066"	"201.5"	"100.000"	"58.0660"	"18114"	"18114"	"18091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"348.7"	""	"313.4"	""	"316.9"	""	"252.1"	"2.1"	"328.9"	"342.7"	""	"829"	"30"	"36.000"	"29.000"	"0.0446194831049567"	"14"	"0.0001308"	"0.000232"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAGSAFDFENMK"	"[R].mAGSAFDFENMk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"602.63776"	"1805.89872"	"1805.89665"	"1.15"	"0.00069"	"10/102"	"10"	"102"	"4831917.69519043"	"HCD"	"MS2"	"36.94508"	"216.1"	"100.000"	"58.2349"	"18237"	"18237"	"18213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.2"	""	"357.0"	""	"350.1"	""	"260.3"	""	"341.6"	"362.9"	""	"824"	"27"	"36.000"	"29.000"	"0.0911795020357523"	"21"	"0.0001889"	"0.0006088"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAGSAFDFENMK"	"[R].mAGSAFDFENMk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.9425"	"0.0000"	"1"	"1"	"1"	"903.45355"	"1805.89983"	"1805.89665"	"1.76"	"0.00159"	"11/102"	"11"	"102"	"1188737.4432373"	"HCD"	"MS2"	"0"	"122.8"	"100.000"	"57.9277"	"18058"	"18058"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.4"	""	"159.7"	""	"138.8"	""	"143.2"	"0.8"	"246.5"	"276.1"	""	"831"	"87"	"36.000"	"29.000"	"7.88081310263232E-08"	"23"	"0"	"5.784E-07"	"1.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLAGNVFDWGAK"	"[K].gLLAGNVFDWGAk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q923S8"	"Pantothenate kinase 4 OS=Rattus norvegicus OX=10116 GN=Pank4 PE=1 SV=1"	"Q923S8"	"Pantothenate kinase 4 OS=Rattus norvegicus OX=10116 GN=Pank4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"602.68152"	"1806.03000"	"1806.03143"	"-0.79"	"-0.00047"	"13/110"	"13"	"110"	"767517.055114746"	"HCD"	"MS2"	"29.90255"	"31.7"	"100.000"	"74.6217"	"24862"	"24862"	"24833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.6"	""	"44.7"	""	"49.4"	""	"51.4"	""	"58.7"	"59.1"	""	"1064"	"53"	"37.000"	"30.000"	"0.000241496940057908"	"16"	"0"	"1.438E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].aSDSSINWNNLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9054"	"0.0000"	"1"	"1"	"1"	"903.99127"	"1806.97527"	"1806.97503"	"0.13"	"0.00012"	"20/104"	"20"	"104"	"2065357.00494385"	"HCD"	"MS2"	"0"	"183.1"	"100.000"	"46.9581"	"13603"	"13603"	"13576"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"426.0"	""	"258.8"	""	"239.3"	""	"266.3"	""	"253.2"	"283.8"	""	"1222"	"74"	"37.000"	"30.000"	"2.48336874119945E-06"	"25"	"0"	"1.434E-06"	"1.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].aSDSSINWNNLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"602.99677"	"1806.97574"	"1806.97503"	"0.39"	"0.00024"	"8/104"	"8"	"104"	"14163646.3664551"	"HCD"	"MS2"	"12.80322"	"429.9"	"100.000"	"46.9787"	"13611"	"13611"	"13592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"861.7"	""	"561.5"	""	"586.3"	""	"673.0"	"9.1"	"676.5"	"692.3"	""	"1224"	"40"	"37.000"	"30.000"	"0.00623377929489119"	"18"	"0"	"0.0001081"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].aSDSSINWNNLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"602.99695"	"1806.97629"	"1806.97503"	"0.70"	"0.00042"	"13/104"	"13"	"104"	"16220259.1049805"	"HCD"	"MS2"	"11.98621"	"369.6"	"80.241"	"47.2769"	"13781"	"13781"	"13762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"751.1"	""	"499.4"	""	"497.0"	""	"576.8"	"12.7"	"574.3"	"578.9"	""	"1225"	"35"	"37.000"	"30.000"	"0.0197745264954899"	"18"	"0.0001889"	"0.00045"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].aSDSSINWNNLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"903.99207"	"1806.97685"	"1806.97503"	"1.01"	"0.00091"	"15/104"	"15"	"104"	"1720982.25360107"	"HCD"	"MS2"	"0"	"162.1"	"100.000"	"47.2149"	"13756"	"13756"	"13730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"369.2"	""	"233.1"	""	"219.3"	""	"230.0"	""	"233.7"	"245.0"	""	"1222"	"50"	"37.000"	"30.000"	"0.000611"	"22"	"0"	"3.45E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDFQLNQLQGK"	"[K].gTDFQLNQLQGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"904.00861"	"1807.00994"	"1807.01142"	"-0.82"	"-0.00074"	"8/104"	"8"	"104"	"579857.364135742"	"HCD"	"MS2"	"0"	"55.4"	"100.000"	"46.0877"	"13295"	"13295"	"13273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.9"	""	"70.7"	""	"52.5"	""	"93.3"	"0.7"	"112.5"	"100.3"	""	"1155"	"40"	"37.000"	"30.000"	"0.00574846628520506"	"27"	"0"	"5.17E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDFQLNQLQGK"	"[K].gTDFQLNQLQGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"603.00818"	"1807.00998"	"1807.01142"	"-0.79"	"-0.00048"	"6/104"	"6"	"104"	"3366945.10571289"	"HCD"	"MS2"	"16.51126"	"159.5"	"100.000"	"46.2322"	"13354"	"13354"	"13328"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.5"	""	"210.2"	""	"241.4"	""	"238.1"	"2.6"	"294.4"	"294.7"	""	"1157"	"32"	"37.000"	"30.000"	"0.0336746711480449"	"23"	"0"	"4.345E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDFQLNQLQGK"	"[K].gTDFQLNQLQGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"603.00818"	"1807.00998"	"1807.01142"	"-0.79"	"-0.00048"	"6/104"	"6"	"104"	"3545266.38183594"	"HCD"	"MS2"	"30.41201"	"158.4"	"100.000"	"45.9543"	"13192"	"13192"	"13165"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.1"	""	"192.5"	""	"219.7"	""	"242.4"	""	"301.6"	"318.9"	""	"1157"	"37"	"37.000"	"30.000"	"0.0111250856517453"	"25"	"0"	"4.408E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDFQLNQLQGK"	"[K].gTDFQLNQLQGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"904.00928"	"1807.01128"	"1807.01142"	"-0.08"	"-0.00007"	"10/104"	"10"	"104"	"628648.755493164"	"HCD"	"MS2"	"0"	"60.1"	"100.000"	"45.8464"	"13148"	"13148"	"13118"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.2"	""	"69.5"	""	"63.0"	""	"93.0"	"2.3"	"119.2"	"117.0"	""	"1140"	"64"	"37.000"	"30.000"	"2.43710845106404E-05"	"29"	"0"	"9.795E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVDSYVAIINK"	"[R].nLVDSYVAIINk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"904.03796"	"1807.06865"	"1807.07296"	"-2.38"	"-0.00215"	"15/112"	"15"	"112"	"809398.959838867"	"HCD"	"MS2"	"100"	"69.4"	"100.000"	"68.3765"	"22313"	"22313"	"22282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.8"	""	"91.3"	""	"103.1"	""	"115.6"	""	"137.5"	"126.4"	""	"702"	"38"	"35.000"	"28.000"	"0.00552467985427643"	"15"	"0"	"5.712E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KHNQTPGQVALR"	"[K].kHNQTPGQVALR.[Y]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.02783"	"1807.06894"	"1807.07027"	"-0.73"	"-0.00044"	"10/110"	"10"	"110"	"2254176.48272705"	"HCD"	"MS2"	"6.840025"	"90.9"	"100.000"	"23.9581"	"4274"	"4274"	"4251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.9"	""	"126.8"	""	"135.5"	""	"144.2"	""	"145.2"	"147.3"	""	"701"	"32"	"35.000"	"28.000"	"0.0220134454764068"	"15"	"0"	"0.0001436"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KHNQTPGQVALR"	"[K].kHNQTPGQVALR.[Y]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.02802"	"1807.06949"	"1807.07027"	"-0.43"	"-0.00026"	"9/110"	"9"	"110"	"2225704.17449951"	"HCD"	"MS2"	"0"	"89.6"	"100.000"	"24.0146"	"4331"	"4331"	"4302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.8"	""	"126.6"	""	"135.8"	""	"138.8"	""	"138.8"	"147.6"	""	"701"	"32"	"35.000"	"28.000"	"0.0220641917091448"	"15"	"0"	"3.937E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVDSYVAIINK"	"[R].nLVDSYVAIINk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"603.02856"	"1807.07114"	"1807.07296"	"-1.00"	"-0.00061"	"8/112"	"8"	"112"	"4021988.6517334"	"HCD"	"MS2"	"20.61589"	"107.8"	"100.000"	"68.2345"	"22306"	"22306"	"22282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.3"	""	"152.6"	""	"139.4"	""	"196.3"	""	"201.4"	"199.8"	""	"683"	"33"	"35.000"	"28.000"	"0.0153953904600909"	"26"	"0.0001308"	"0.0002183"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVDSYVAIINK"	"[R].nLVDSYVAIINk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"603.02917"	"1807.07297"	"1807.07296"	"0.01"	"0.00001"	"8/112"	"8"	"112"	"3474758.52630615"	"HCD"	"MS2"	"16.09117"	"102.8"	"100.000"	"68.3627"	"22307"	"22307"	"22282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.1"	""	"123.9"	""	"145.1"	""	"193.0"	""	"203.0"	"193.5"	""	"673"	"31"	"35.000"	"28.000"	"0.0256439586873551"	"21"	"0"	"0.0001713"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILDLNTYNVVK"	"[R].gILDLNTYNVVk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"904.04034"	"1807.07341"	"1807.07296"	"0.25"	"0.00023"	"9/106"	"9"	"106"	"535629.526428223"	"HCD"	"MS2"	"27.48713"	"48.4"	"100.000"	"63.5722"	"20359"	"20359"	"20329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.6"	""	"65.1"	""	"59.6"	""	"71.1"	"0.9"	"93.8"	"98.9"	""	"691"	"31"	"35.000"	"28.000"	"0.0246290721908713"	"24"	"0.0001889"	"0.0003923"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVDSYVAIINK"	"[R].nLVDSYVAIINk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.9531"	"0.0000"	"1"	"1"	"1"	"904.04053"	"1807.07378"	"1807.07296"	"0.45"	"0.00041"	"10/112"	"10"	"112"	"988172.453796387"	"HCD"	"MS2"	"20.90284"	"74.0"	"100.000"	"68.2807"	"22325"	"22325"	"22298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.6"	""	"108.5"	""	"101.4"	""	"123.0"	"1.7"	"140.2"	"132.8"	""	"691"	"64"	"35.000"	"28.000"	"1.51512356081258E-05"	"19"	"0"	"5.729E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTLLNHERPIK"	"[R].qTLLNHERPIk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.03583"	"1807.09293"	"1807.09542"	"-1.38"	"-0.00083"	"14/110"	"14"	"110"	"4679476.25189209"	"HCD"	"MS2"	"3.472222"	"260.3"	"100.000"	"29.5584"	"6551"	"6551"	"6528"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"345.8"	""	"335.4"	""	"294.7"	""	"515.1"	"2.6"	"529.4"	"445.5"	""	"493"	"19"	"33.000"	"26.000"	"0.283019867698982"	"14"	"0"	"3.523E-06"	"1.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTLLNHERPIK"	"[R].qTLLNHERPIk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.03589"	"1807.09311"	"1807.09542"	"-1.28"	"-0.00077"	"9/110"	"9"	"110"	"3677138.62963867"	"HCD"	"MS2"	"0"	"225.5"	"100.000"	"29.4797"	"6478"	"6478"	"6454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"284.1"	""	"280.6"	""	"249.1"	""	"450.0"	""	"509.3"	"381.7"	""	"492"	"11"	"33.000"	"26.000"	"1.94506942487957"	"13"	"0"	"3.554E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAPDSACVIGLR"	"[R].vFANAPDSAcVIGLR.[K]"	"N-Term(TMT6plex); C10(Methylthio)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"904.47180"	"1807.93633"	"1807.93963"	"-1.83"	"-0.00165"	"11/136"	"11"	"136"	"320873.582885742"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"67.4022"	"21917"	"21917"	"21897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.5"	""	"28.7"	""	"29.3"	""	"30.2"	""	"34.6"	"33.8"	""	"1055"	"46"	"37.000"	"30.000"	"0.00134036310217726"	"24"	"0"	"5.935E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"603.32770"	"1807.96854"	"1807.97264"	"-2.27"	"-0.00137"	"9/146"	"9"	"146"	"300185.340576172"	"HCD"	"MS2"	"30.13654"	"13.5"	"100.000"	"80.1779"	"27118"	"27118"	"27089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.7"	""	"20.6"	""	"19.8"	""	"18.2"	""	"22.7"	"27.5"	""	"1213"	"32"	"37.000"	"30.000"	"0.0377425122955095"	"22"	"0"	"9.144E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"603.32806"	"1807.96964"	"1807.97264"	"-1.66"	"-0.00100"	"7/146"	"7"	"146"	"320208.643371582"	"HCD"	"MS2"	"62.72667"	"11.2"	"100.000"	"84.1519"	"28739"	"28739"	"28708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.3"	""	"10.4"	""	"12.2"	""	"16.7"	""	"15.0"	"42.7"	""	"1206"	"6"	"37.000"	"30.000"	"13.6243976944325"	"14"	"0.0006037"	"0.004467"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"603.32806"	"1807.96964"	"1807.97264"	"-1.66"	"-0.00100"	"13/146"	"13"	"146"	"425402.914855957"	"HCD"	"MS2"	"19.94215"	"15.1"	"100.000"	"78.4401"	"26409"	"26409"	"26385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.6"	""	"20.8"	""	"21.9"	""	"27.3"	""	"23.1"	"33.9"	""	"1206"	"30"	"37.000"	"30.000"	"0.0621322830626295"	"26"	"0"	"3.715E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"603.32831"	"1807.97037"	"1807.97264"	"-1.26"	"-0.00076"	"13/146"	"13"	"146"	"395393.970825195"	"HCD"	"MS2"	"22.90979"	"14.8"	"100.000"	"78.4302"	"26456"	"26456"	"26431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"23.5"	""	"17.6"	"1.9"	"21.1"	""	"23.4"	"33.0"	""	"1206"	"27"	"37.000"	"30.000"	"0.125117285102531"	"24"	"0"	"0.0001196"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"904.48883"	"1807.97038"	"1807.97264"	"-1.25"	"-0.00113"	"5/146"	"5"	"146"	"131474.674987793"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"79.9925"	"27093"	"27093"	"27071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.8"	""	"12.6"	""	"15.6"	""	"15.5"	""	"17.0"	"19.9"	""	"1206"	"13"	"37.000"	"30.000"	"2.96699840015915"	"14"	"0.003286"	"0.06958"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"904.48889"	"1807.97051"	"1807.97264"	"-1.18"	"-0.00107"	"9/146"	"9"	"146"	"133480.600891113"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"78.7193"	"26523"	"26523"	"26497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.2"	""	"13.4"	""	"15.9"	""	"11.2"	""	"17.4"	"16.3"	""	"1218"	"16"	"37.000"	"30.000"	"1.62038156141747"	"13"	"0.00175"	"0.02428"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"904.48895"	"1807.97063"	"1807.97264"	"-1.11"	"-0.00101"	"9/146"	"9"	"146"	"139588.097839355"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"80.4424"	"27277"	"27277"	"27247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.8"	""	"12.9"	""	"7.2"	""	"14.7"	""	"14.7"	"20.8"	""	"1219"	"4"	"37.000"	"30.000"	"22.4374609435123"	"14"	"0.002772"	"0.04469"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9636"	"0.0000"	"1"	"1"	"1"	"904.48895"	"1807.97063"	"1807.97264"	"-1.11"	"-0.00101"	"13/146"	"13"	"146"	"7283352.01055908"	"HCD"	"MS2"	"7.878086"	"230.2"	"84.461"	"72.6572"	"24112"	"24112"	"24095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.3"	""	"291.9"	""	"354.1"	""	"633.5"	"0.8"	"293.8"	"352.5"	""	"1219"	"55"	"37.000"	"30.000"	"0.000212311593514449"	"17"	"0.0001308"	"0.000215"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQFIPFHSDLGYR"	"[K].vQFIPFHSDLGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"603.32843"	"1807.97074"	"1807.96927"	"0.81"	"0.00049"	"9/120"	"9"	"120"	"4928216.57275391"	"HCD"	"MS2"	"28.95584"	"127.1"	"100.000"	"54.5960"	"16749"	"16749"	"16725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.2"	""	"190.7"	""	"197.6"	""	"192.8"	"2.5"	"225.1"	"227.5"	""	"1220"	"24"	"37.000"	"30.000"	"0.260213506468972"	"21"	"0"	"6.656E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"904.48914"	"1807.97099"	"1807.97264"	"-0.91"	"-0.00082"	"5/146"	"5"	"146"	"181676.064147949"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"80.8186"	"27430"	"27430"	"27406"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.0"	""	"26.1"	""	"25.6"	""	"16.3"	""	"26.8"	"27.1"	""	"1219"	"13"	"37.000"	"30.000"	"3.12589013542737"	"19"	"0.002711"	"0.04079"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"904.48914"	"1807.97099"	"1807.97264"	"-0.91"	"-0.00082"	"11/146"	"11"	"146"	"7864128.35900879"	"HCD"	"MS2"	"33.51328"	"416.4"	"100.000"	"72.3958"	"23954"	"23954"	"23937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"510.0"	""	"604.6"	""	"688.4"	""	"854.4"	""	"574.0"	"711.5"	""	"1219"	"24"	"37.000"	"30.000"	"0.222317530651158"	"14"	"0.0006396"	"0.006254"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"904.48914"	"1807.97099"	"1807.97264"	"-0.91"	"-0.00082"	"21/146"	"21"	"146"	"8709518.37280273"	"HCD"	"MS2"	"37.04742"	"413.0"	"100.000"	"72.3479"	"23985"	"23985"	"23967"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"521.7"	""	"631.8"	""	"670.4"	""	"864.0"	""	"545.3"	"677.2"	""	"1219"	"24"	"37.000"	"30.000"	"0.250019400770337"	"14"	"0.0008453"	"0.00824"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"603.32855"	"1807.97110"	"1807.97264"	"-0.85"	"-0.00051"	"4/146"	"4"	"146"	"252649.445800781"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"77.2538"	"25925"	"25925"	"25897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.0"	""	"15.7"	""	"14.7"	""	"21.1"	""	"24.2"	"27.3"	""	"1216"	"11"	"37.000"	"30.000"	"5.06878160248738"	"16"	"0.0003839"	"0.002044"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.32855"	"1807.97110"	"1807.97264"	"-0.85"	"-0.00051"	"6/146"	"6"	"146"	"886736.095825195"	"HCD"	"MS2"	"40.95974"	"27.0"	"100.000"	"80.8070"	"27425"	"27425"	"27406"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.0"	""	"43.7"	""	"41.2"	""	"41.9"	""	"48.4"	"48.1"	""	"1216"	"12"	"37.000"	"30.000"	"3.58842256744481"	"13"	"0.0001308"	"0.0003077"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"603.32855"	"1807.97110"	"1807.97264"	"-0.85"	"-0.00051"	"13/146"	"13"	"146"	"4287248.82507324"	"HCD"	"MS2"	"4.542408"	"50.7"	"100.000"	"72.8250"	"24180"	"24180"	"24159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.2"	""	"62.8"	""	"79.5"	""	"119.6"	""	"74.5"	"85.0"	""	"1216"	"34"	"37.000"	"30.000"	"0.022228163330078"	"17"	"0"	"0.0001709"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"904.48920"	"1807.97112"	"1807.97264"	"-0.84"	"-0.00076"	"5/146"	"5"	"146"	"79443.3493041992"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"84.6906"	"29009"	"29009"	"28984"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.1"	""	"9.2"	""	"6.4"	""	"9.1"	""	"13.9"	"13.7"	""	"1216"	"10"	"37.000"	"30.000"	"5.60923427710096"	"13"	"0.001217"	"0.01657"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"904.48932"	"1807.97136"	"1807.97264"	"-0.71"	"-0.00064"	"11/146"	"11"	"146"	"461488.030029297"	"HCD"	"MS2"	"6.562386"	"33.1"	"100.000"	"72.9799"	"24243"	"24243"	"24223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.4"	""	"39.1"	""	"44.2"	""	"78.9"	""	"52.7"	"61.0"	""	"1215"	"44"	"37.000"	"30.000"	"0.00263357858620424"	"17"	"0.0001889"	"0.0006292"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"904.48944"	"1807.97161"	"1807.97264"	"-0.57"	"-0.00052"	"8/146"	"8"	"146"	"390470.125366211"	"HCD"	"MS2"	"16.73469"	"27.9"	"100.000"	"73.0369"	"24215"	"24215"	"24193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.9"	""	"33.2"	""	"37.4"	""	"72.1"	""	"42.2"	"47.6"	""	"1224"	"23"	"37.000"	"30.000"	"0.274632178639077"	"16"	"0.0001889"	"0.001089"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"904.48950"	"1807.97173"	"1807.97264"	"-0.51"	"-0.00046"	"5/146"	"5"	"146"	"81660.5618286133"	"HCD"	"MS2"	"11.98021"	"8.7"	"100.000"	"84.7861"	"28997"	"28997"	"28971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.6"	""	"12.0"	""	"12.0"	""	"19.3"	""	"16.1"	"15.7"	""	"1220"	"12"	"37.000"	"30.000"	"4.18147818136124"	"23"	"0.00423"	"0.1088"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"904.48950"	"1807.97173"	"1807.97264"	"-0.51"	"-0.00046"	"5/146"	"5"	"146"	"143986.362915039"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"80.0185"	"27053"	"27053"	"27025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.2"	""	"16.4"	""	"14.1"	""	"13.8"	""	"16.6"	"18.8"	""	"1220"	"15"	"37.000"	"30.000"	"2.09088349793335"	"14"	"0.003818"	"0.09549"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"904.48956"	"1807.97185"	"1807.97264"	"-0.44"	"-0.00040"	"5/146"	"5"	"146"	"103762.89050293"	"HCD"	"MS2"	"8.986264"	"7.1"	"100.000"	"81.1327"	"27558"	"27558"	"27534"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"11.9"	""	"11.4"	""	"8.0"	""	"13.7"	"13.2"	""	"1218"	"14"	"37.000"	"30.000"	"2.40224496963844"	"18"	"0.001454"	"0.01987"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQFIPFHSDLGYR"	"[K].vQFIPFHSDLGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"Q6AYT7"	"Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus OX=10116 GN=Abhd12 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.32886"	"1807.97202"	"1807.96927"	"1.52"	"0.00092"	"10/120"	"10"	"120"	"5056232.92584229"	"HCD"	"MS2"	"19.19174"	"126.8"	"100.000"	"54.4677"	"16643"	"16643"	"16624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.2"	""	"184.9"	""	"207.4"	""	"155.9"	"2.1"	"234.5"	"246.2"	""	"1217"	"13"	"37.000"	"30.000"	"3.27537162661162"	"14"	"0.0001889"	"0.0005469"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.32892"	"1807.97220"	"1807.97264"	"-0.24"	"-0.00015"	"8/146"	"8"	"146"	"819532.429199219"	"HCD"	"MS2"	"36.25061"	"25.5"	"100.000"	"80.8746"	"27402"	"27402"	"27376"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.6"	""	"33.2"	""	"35.1"	""	"42.2"	""	"48.2"	"49.3"	""	"1216"	"16"	"37.000"	"30.000"	"1.46860018734252"	"14"	"0.0001859"	"0.0003523"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"904.48975"	"1807.97222"	"1807.97264"	"-0.24"	"-0.00021"	"4/146"	"4"	"146"	"131261.35144043"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"78.9122"	"26653"	"26653"	"26623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.7"	""	"15.1"	""	"14.3"	""	"15.1"	""	"15.2"	"14.0"	""	"1216"	"17"	"37.000"	"30.000"	"1.29988095041736"	"18"	"0.004346"	"0.1212"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"603.32898"	"1807.97239"	"1807.97264"	"-0.14"	"-0.00009"	"9/146"	"9"	"146"	"2700999.46234131"	"HCD"	"MS2"	"4.497639"	"39.0"	"100.000"	"72.9099"	"24163"	"24163"	"24145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.5"	""	"47.0"	""	"62.1"	""	"82.3"	""	"68.0"	"69.8"	""	"1212"	"32"	"37.000"	"30.000"	"0.0350326204727865"	"17"	"0"	"9.323E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"603.32904"	"1807.97257"	"1807.97264"	"-0.04"	"-0.00002"	"12/146"	"12"	"146"	"392900.614013672"	"HCD"	"MS2"	"9.193551"	"13.4"	"100.000"	"81.1238"	"27554"	"27554"	"27534"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.5"	""	"15.1"	""	"17.1"	""	"26.1"	""	"20.4"	"29.7"	""	"1207"	"26"	"37.000"	"30.000"	"0.138892013680603"	"17"	"7.476E-05"	"0.000184"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"904.48999"	"1807.97270"	"1807.97264"	"0.03"	"0.00003"	"13/146"	"13"	"146"	"7241200.11627197"	"HCD"	"MS2"	"7.810656"	"126.4"	"75.230"	"72.7096"	"24082"	"24082"	"24065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.8"	""	"164.2"	""	"200.4"	"0.9"	"317.4"	"0.8"	"166.7"	"200.3"	""	"1210"	"50"	"37.000"	"30.000"	"0.000544196036825671"	"17"	"0.0001308"	"0.0002769"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.32916"	"1807.97293"	"1807.97264"	"0.16"	"0.00010"	"14/146"	"14"	"146"	"4423664.81732178"	"HCD"	"MS2"	"39.15819"	"94.2"	"100.000"	"72.2053"	"23927"	"23927"	"23903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.4"	""	"147.0"	""	"158.2"	""	"150.4"	""	"131.4"	"178.0"	""	"1210"	"20"	"37.000"	"30.000"	"0.541695683157504"	"14"	"7.476E-05"	"0.0002052"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"904.49036"	"1807.97344"	"1807.97264"	"0.44"	"0.00040"	"9/146"	"9"	"146"	"139031.209716797"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"79.0352"	"26652"	"26652"	"26625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.4"	""	"11.2"	""	"17.0"	""	"13.5"	""	"12.3"	"19.3"	""	"1201"	"6"	"37.000"	"30.000"	"15.9409063996631"	"15"	"0.00162"	"0.02229"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"603.32935"	"1807.97348"	"1807.97264"	"0.47"	"0.00028"	"9/146"	"9"	"146"	"362715.719421387"	"HCD"	"MS2"	"31.99654"	"13.2"	"100.000"	"80.2878"	"27214"	"27214"	"27183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.5"	""	"24.4"	""	"17.8"	""	"20.1"	""	"19.7"	"28.3"	""	"1201"	"24"	"37.000"	"30.000"	"0.237964959570391"	"15"	"0"	"0.0001472"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"603.33026"	"1807.97623"	"1807.97264"	"1.99"	"0.00120"	"11/146"	"11"	"146"	"308021.827941895"	"HCD"	"MS2"	"7.856783"	"15.5"	"100.000"	"81.6315"	"27711"	"27711"	"27680"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.8"	""	"19.7"	""	"18.4"	""	"26.1"	""	"27.8"	"33.2"	""	"1208"	"21"	"37.000"	"30.000"	"0.534609828337825"	"16"	"0.0001859"	"0.0003206"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.33026"	"1807.97623"	"1807.97264"	"1.99"	"0.00120"	"15/146"	"15"	"146"	"35227145.2255859"	"HCD"	"MS2"	"36.94615"	"120.1"	"23.615"	"72.5920"	"24034"	"24034"	"24017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.2"	""	"166.5"	""	"215.1"	""	"225.1"	""	"152.7"	"241.9"	""	"1208"	"26"	"37.000"	"30.000"	"0.164830258081606"	"14"	"0.0001308"	"0.0002263"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.33069"	"1807.97751"	"1807.97264"	"2.69"	"0.00162"	"15/146"	"15"	"146"	"37901127.6558838"	"HCD"	"MS2"	"44.81731"	"179.9"	"29.300"	"72.5004"	"24048"	"24048"	"24031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.6"	""	"299.8"	""	"306.4"	""	"302.6"	""	"237.3"	"339.1"	""	"1199"	"23"	"37.000"	"30.000"	"0.313176515304972"	"14"	"0.0001889"	"0.000762"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"603.33130"	"1807.97934"	"1807.97264"	"3.71"	"0.00223"	"11/146"	"11"	"146"	"589704.262084961"	"HCD"	"MS2"	"29.57317"	"24.8"	"100.000"	"79.8355"	"27029"	"27029"	"27007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.5"	""	"37.8"	""	"36.5"	""	"35.4"	""	"48.3"	"47.6"	""	"1189"	"27"	"37.000"	"30.000"	"0.131568480486055"	"16"	"0.0001889"	"0.001073"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"603.33173"	"1807.98062"	"1807.97264"	"4.42"	"0.00266"	"14/146"	"14"	"146"	"5108737.11065674"	"HCD"	"MS2"	"38.39761"	"106.3"	"100.000"	"72.2735"	"23904"	"23904"	"23873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.3"	""	"163.1"	""	"175.9"	""	"190.3"	""	"161.7"	"191.1"	""	"1176"	"20"	"37.000"	"30.000"	"0.547491430775084"	"14"	"0.0001889"	"0.000656"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"603.33197"	"1807.98136"	"1807.97264"	"4.82"	"0.00291"	"9/146"	"9"	"146"	"1095130.76940918"	"HCD"	"MS2"	"8.106492"	"30.2"	"100.000"	"79.2076"	"26773"	"26773"	"26751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.9"	""	"45.2"	""	"38.9"	""	"36.1"	""	"46.3"	"74.4"	""	"1172"	"8"	"37.000"	"30.000"	"10.3489816292209"	"18"	"0.0006037"	"0.004016"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"603.33246"	"1807.98282"	"1807.97264"	"5.63"	"0.00339"	"10/146"	"10"	"146"	"560072.953552246"	"HCD"	"MS2"	"15.40044"	"17.9"	"100.000"	"79.5353"	"26907"	"26907"	"26879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.4"	""	"26.4"	""	"20.9"	""	"26.7"	"1.2"	"33.8"	"38.6"	""	"1182"	"23"	"37.000"	"30.000"	"0.285487752005506"	"15"	"0.0001859"	"0.0003512"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGWNIPMGLLFSR"	"[R].tAGWNIPmGLLFSR.[I]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"603.33282"	"1807.98392"	"1807.97264"	"6.24"	"0.00376"	"14/146"	"14"	"146"	"708800.14074707"	"HCD"	"MS2"	"27.92209"	"28.7"	"100.000"	"79.7806"	"26956"	"26956"	"26929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.3"	""	"44.2"	""	"35.7"	""	"43.4"	"1.9"	"50.6"	"55.1"	""	"1176"	"24"	"37.000"	"30.000"	"0.241756036009459"	"16"	"7.476E-05"	"0.000184"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLLSTAPFSSISVSR"	"[].nLLSTAPFSSISVSR.[]"	"N-Term(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"603.34229"	"1808.01230"	"1808.01153"	"0.43"	"0.00026"	"4/160"	"4"	"160"	"4428320.88146973"	"HCD"	"MS2"	"0"	"140.6"	"100.000"	"52.6230"	"15960"	"15960"	"15942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"238.5"	""	"236.9"	""	"229.6"	""	"165.9"	"1.1"	"231.8"	"224.8"	""	"1094"	"6"	"37.000"	"30.000"	"14.8247482264429"	"17"	"0.006001"	"0.2067"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"603.35553"	"1808.05204"	"1808.06034"	"-4.59"	"-0.00277"	"15/118"	"15"	"118"	"8831798.80938721"	"HCD"	"MS2"	"28.54049"	"255.8"	"100.000"	"59.4548"	"18730"	"18730"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"347.1"	""	"395.2"	""	"412.4"	""	"346.2"	""	"483.5"	"439.4"	""	"828"	"56"	"36.000"	"29.000"	"0.000105438772457021"	"16"	"0"	"3.064E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"603.35553"	"1808.05204"	"1808.06034"	"-4.59"	"-0.00277"	"15/118"	"15"	"118"	"8831798.80938721"	"HCD"	"MS2"	"28.54049"	"255.8"	"100.000"	"59.4548"	"18730"	"18730"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"347.1"	""	"395.2"	""	"412.4"	""	"346.2"	""	"483.5"	"439.4"	""	"828"	"56"	"36.000"	"29.000"	"0.000105438772457021"	"16"	"0"	"3.064E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQVIILYSGDK"	"[K].vDQVIILYSGDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"3"	"904.53162"	"1808.05596"	"1808.05697"	"-0.56"	"-0.00051"	"3/124"	"3"	"124"	"110880.625061035"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"64.2773"	"20647"	"20647"	"20617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.8"	""	"17.1"	""	"21.9"	""	"19.2"	""	"27.4"	"25.2"	""	"825"	"6"	"36.000"	"29.000"	"10.361531529977"	"14"	"0.004631"	"0.1355"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQVIILYSGDK"	"[K].vDQVIILYSGDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"603.35687"	"1808.05606"	"1808.05697"	"-0.50"	"-0.00030"	"12/124"	"12"	"124"	"772110.34765625"	"HCD"	"MS2"	"9.043863"	"36.7"	"100.000"	"64.2613"	"20640"	"20640"	"20617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.4"	""	"44.6"	""	"58.6"	""	"64.3"	""	"69.2"	"68.6"	""	"825"	"18"	"36.000"	"29.000"	"0.668996665160558"	"15"	"0.0001308"	"0.000251"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"603.35706"	"1808.05661"	"1808.06034"	"-2.06"	"-0.00124"	"10/118"	"10"	"118"	"17041295.5914307"	"HCD"	"MS2"	"9.895587"	"423.9"	"88.519"	"59.3586"	"18637"	"18637"	"18617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.4"	""	"600.6"	""	"614.3"	""	"624.6"	""	"788.4"	"821.4"	""	"818"	"78"	"36.000"	"29.000"	"6.61794735396015E-07"	"18"	"0"	"1.879E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"603.35706"	"1808.05661"	"1808.06034"	"-2.06"	"-0.00124"	"10/118"	"10"	"118"	"17041295.5914307"	"HCD"	"MS2"	"9.895587"	"423.9"	"88.519"	"59.3586"	"18637"	"18637"	"18617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.4"	""	"600.6"	""	"614.3"	""	"624.6"	""	"788.4"	"821.4"	""	"818"	"78"	"36.000"	"29.000"	"6.61794735396015E-07"	"18"	"0"	"1.879E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"904.53235"	"1808.05742"	"1808.06034"	"-1.62"	"-0.00146"	"22/118"	"22"	"118"	"2504190.64361572"	"HCD"	"MS2"	"11.86312"	"186.5"	"100.000"	"59.4731"	"18738"	"18738"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"275.7"	""	"294.0"	""	"289.0"	""	"239.3"	"4.4"	"325.6"	"337.1"	""	"821"	"96"	"36.000"	"29.000"	"1.14898183170991E-08"	"23"	"0"	"5.152E-07"	"1.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"904.53235"	"1808.05742"	"1808.06034"	"-1.62"	"-0.00146"	"22/118"	"22"	"118"	"2504190.64361572"	"HCD"	"MS2"	"11.86312"	"186.5"	"100.000"	"59.4731"	"18738"	"18738"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"275.7"	""	"294.0"	""	"289.0"	""	"239.3"	"4.4"	"325.6"	"337.1"	""	"821"	"96"	"36.000"	"29.000"	"1.14898183170991E-08"	"23"	"0"	"5.152E-07"	"1.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQVIILYSGDK"	"[K].vDQVIILYSGDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"603.35748"	"1808.05790"	"1808.05697"	"0.51"	"0.00031"	"14/124"	"14"	"124"	"1364043.14080811"	"HCD"	"MS2"	"19.95508"	"50.8"	"100.000"	"64.2112"	"20673"	"20673"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.2"	""	"64.1"	""	"70.1"	""	"84.8"	"0.8"	"102.7"	"101.1"	""	"822"	"36"	"36.000"	"29.000"	"0.0113459749890656"	"23"	"0"	"7.781E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"904.53271"	"1808.05815"	"1808.06034"	"-1.21"	"-0.00109"	"22/118"	"22"	"118"	"4013231.12860107"	"HCD"	"MS2"	"0"	"275.0"	"100.000"	"60.7584"	"19263"	"19263"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"463.0"	""	"437.1"	""	"461.5"	""	"321.2"	"0.5"	"441.1"	"474.6"	""	"815"	"94"	"36.000"	"29.000"	"1.74231876106772E-08"	"24"	"0"	"4.119E-07"	"1.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"904.53271"	"1808.05815"	"1808.06034"	"-1.21"	"-0.00109"	"22/118"	"22"	"118"	"4013231.12860107"	"HCD"	"MS2"	"0"	"275.0"	"100.000"	"60.7584"	"19263"	"19263"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"463.0"	""	"437.1"	""	"461.5"	""	"321.2"	"0.5"	"441.1"	"474.6"	""	"815"	"94"	"36.000"	"29.000"	"1.74231876106772E-08"	"24"	"0"	"4.119E-07"	"1.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"904.53278"	"1808.05828"	"1808.06034"	"-1.14"	"-0.00103"	"21/118"	"21"	"118"	"2585906.71282959"	"HCD"	"MS2"	"0"	"186.4"	"100.000"	"61.0488"	"19381"	"19381"	"19363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.9"	""	"263.3"	""	"317.6"	""	"202.8"	"4.8"	"312.8"	"358.7"	""	"815"	"92"	"36.000"	"29.000"	"2.64927848814809E-08"	"24"	"0"	"7.432E-07"	"1.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"904.53278"	"1808.05828"	"1808.06034"	"-1.14"	"-0.00103"	"21/118"	"21"	"118"	"2585906.71282959"	"HCD"	"MS2"	"0"	"186.4"	"100.000"	"61.0488"	"19381"	"19381"	"19363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.9"	""	"263.3"	""	"317.6"	""	"202.8"	"4.8"	"312.8"	"358.7"	""	"815"	"92"	"36.000"	"29.000"	"2.64927848814809E-08"	"24"	"0"	"7.432E-07"	"1.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"904.53296"	"1808.05864"	"1808.06034"	"-0.94"	"-0.00085"	"11/118"	"11"	"118"	"2026561.99316406"	"HCD"	"MS2"	"0"	"161.9"	"100.000"	"60.9222"	"19276"	"19276"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.3"	""	"244.1"	""	"257.9"	""	"179.6"	"5.7"	"275.4"	"303.0"	""	"817"	"85"	"36.000"	"29.000"	"1.29775305786043E-07"	"21"	"0"	"2.565E-07"	"1.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"904.53296"	"1808.05864"	"1808.06034"	"-0.94"	"-0.00085"	"11/118"	"11"	"118"	"2026561.99316406"	"HCD"	"MS2"	"0"	"161.9"	"100.000"	"60.9222"	"19276"	"19276"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.3"	""	"244.1"	""	"257.9"	""	"179.6"	"5.7"	"275.4"	"303.0"	""	"817"	"85"	"36.000"	"29.000"	"1.29775305786043E-07"	"21"	"0"	"2.565E-07"	"1.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"603.35791"	"1808.05918"	"1808.06034"	"-0.64"	"-0.00039"	"10/118"	"10"	"118"	"15803569.3079834"	"HCD"	"MS2"	"3.266918"	"151.1"	"37.605"	"61.0443"	"19380"	"19380"	"19363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.2"	""	"222.0"	""	"244.0"	""	"176.4"	"3.6"	"242.3"	"285.7"	""	"785"	"81"	"35.000"	"28.000"	"2.83034685579288E-07"	"20"	"0"	"6.492E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"603.35791"	"1808.05918"	"1808.06034"	"-0.64"	"-0.00039"	"10/118"	"10"	"118"	"15803569.3079834"	"HCD"	"MS2"	"3.266918"	"151.1"	"37.605"	"61.0443"	"19380"	"19380"	"19363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.2"	""	"222.0"	""	"244.0"	""	"176.4"	"3.6"	"242.3"	"285.7"	""	"785"	"81"	"35.000"	"28.000"	"2.83034685579288E-07"	"20"	"0"	"6.492E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"603.35809"	"1808.05973"	"1808.06034"	"-0.34"	"-0.00021"	"9/118"	"9"	"118"	"12499170.897583"	"HCD"	"MS2"	"4.587009"	"120.9"	"32.765"	"60.9199"	"19275"	"19275"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.5"	""	"173.2"	""	"189.4"	""	"145.8"	"2.6"	"213.4"	"232.8"	""	"791"	"62"	"35.000"	"28.000"	"2.35584377765723E-05"	"18"	"0"	"7.347E-06"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"603.35809"	"1808.05973"	"1808.06034"	"-0.34"	"-0.00021"	"9/118"	"9"	"118"	"12499170.897583"	"HCD"	"MS2"	"4.587009"	"120.9"	"32.765"	"60.9199"	"19275"	"19275"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.5"	""	"173.2"	""	"189.4"	""	"145.8"	"2.6"	"213.4"	"232.8"	""	"791"	"62"	"35.000"	"28.000"	"2.35584377765723E-05"	"18"	"0"	"7.347E-06"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"603.35815"	"1808.05991"	"1808.06034"	"-0.24"	"-0.00014"	"10/118"	"10"	"118"	"14131494.2628784"	"HCD"	"MS2"	"4.449832"	"363.3"	"100.000"	"60.7470"	"19258"	"19258"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"607.5"	""	"547.7"	""	"610.2"	""	"444.6"	"1.1"	"590.7"	"632.2"	""	"787"	"74"	"35.000"	"28.000"	"1.62908872041564E-06"	"18"	"0"	"6.752E-06"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"603.35815"	"1808.05991"	"1808.06034"	"-0.24"	"-0.00014"	"10/118"	"10"	"118"	"14131494.2628784"	"HCD"	"MS2"	"4.449832"	"363.3"	"100.000"	"60.7470"	"19258"	"19258"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"607.5"	""	"547.7"	""	"610.2"	""	"444.6"	"1.1"	"590.7"	"632.2"	""	"787"	"74"	"35.000"	"28.000"	"1.62908872041564E-06"	"18"	"0"	"6.752E-06"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"904.53387"	"1808.06047"	"1808.06034"	"0.07"	"0.00006"	"12/118"	"12"	"118"	"1496658.52539063"	"HCD"	"MS2"	"41.5862"	"130.7"	"100.000"	"59.7723"	"18860"	"18860"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.4"	""	"112.2"	""	"155.7"	""	"176.5"	""	"288.0"	"403.4"	""	"762"	"45"	"35.000"	"28.000"	"0.00127035463262793"	"15"	"0"	"2.486E-06"	"1.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"904.53387"	"1808.06047"	"1808.06034"	"0.07"	"0.00006"	"12/118"	"12"	"118"	"1496658.52539063"	"HCD"	"MS2"	"41.5862"	"130.7"	"100.000"	"59.7723"	"18860"	"18860"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.4"	""	"112.2"	""	"155.7"	""	"176.5"	""	"288.0"	"403.4"	""	"762"	"45"	"35.000"	"28.000"	"0.00127035463262793"	"15"	"0"	"2.486E-06"	"1.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"904.53400"	"1808.06072"	"1808.06034"	"0.21"	"0.00019"	"22/118"	"22"	"118"	"2398646.35852051"	"HCD"	"MS2"	"0"	"171.5"	"100.000"	"59.3260"	"18624"	"18624"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.6"	""	"268.5"	""	"272.8"	""	"206.1"	""	"300.5"	"320.6"	""	"762"	"102"	"35.000"	"28.000"	"2.64195232092313E-09"	"23"	"0"	"4.523E-07"	"1.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"904.53400"	"1808.06072"	"1808.06034"	"0.21"	"0.00019"	"22/118"	"22"	"118"	"2398646.35852051"	"HCD"	"MS2"	"0"	"171.5"	"100.000"	"59.3260"	"18624"	"18624"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.6"	""	"268.5"	""	"272.8"	""	"206.1"	""	"300.5"	"320.6"	""	"762"	"102"	"35.000"	"28.000"	"2.64195232092313E-09"	"23"	"0"	"4.523E-07"	"1.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"603.35889"	"1808.06211"	"1808.06034"	"0.98"	"0.00059"	"10/118"	"10"	"118"	"13796629.7875366"	"HCD"	"MS2"	"2.694518"	"334.4"	"100.000"	"60.6020"	"19146"	"19146"	"19129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"551.6"	""	"503.1"	""	"567.0"	""	"380.4"	"8.1"	"544.4"	"607.8"	""	"742"	"73"	"35.000"	"28.000"	"1.75135388308792E-06"	"19"	"0"	"6.274E-06"	"1.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"603.35889"	"1808.06211"	"1808.06034"	"0.98"	"0.00059"	"10/118"	"10"	"118"	"13796629.7875366"	"HCD"	"MS2"	"2.694518"	"334.4"	"100.000"	"60.6020"	"19146"	"19146"	"19129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"551.6"	""	"503.1"	""	"567.0"	""	"380.4"	"8.1"	"544.4"	"607.8"	""	"742"	"73"	"35.000"	"28.000"	"1.75135388308792E-06"	"19"	"0"	"6.274E-06"	"1.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"904.53473"	"1808.06218"	"1808.06034"	"1.02"	"0.00092"	"21/118"	"21"	"118"	"3676212.79681396"	"HCD"	"MS2"	"0"	"257.5"	"100.000"	"60.6064"	"19147"	"19147"	"19129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"452.2"	""	"400.7"	""	"421.5"	""	"295.7"	"1.7"	"414.6"	"447.4"	""	"742"	"92"	"35.000"	"28.000"	"2.38986797506131E-08"	"22"	"0"	"1.033E-06"	"1.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGMTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"904.53473"	"1808.06218"	"1808.06034"	"1.02"	"0.00092"	"21/118"	"21"	"118"	"3676212.79681396"	"HCD"	"MS2"	"0"	"257.5"	"100.000"	"60.6064"	"19147"	"19147"	"19129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"452.2"	""	"400.7"	""	"421.5"	""	"295.7"	"1.7"	"414.6"	"447.4"	""	"742"	"92"	"35.000"	"28.000"	"2.38986797506131E-08"	"22"	"0"	"1.033E-06"	"1.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHVLEAQDLIAK"	"[R].iHVLEAQDLIAk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9661"	"0.0000"	"1"	"1"	"1"	"603.37195"	"1808.10129"	"1808.10459"	"-1.82"	"-0.00110"	"16/104"	"16"	"104"	"6239982.21398926"	"HCD"	"MS2"	"37.86555"	"159.4"	"100.000"	"50.9842"	"15240"	"15240"	"15218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.1"	""	"182.9"	""	"200.4"	""	"307.8"	"1.3"	"320.5"	"330.1"	""	"418"	"59"	"33.000"	"26.000"	"2.51852511537706E-05"	"18"	"0"	"7.675E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHVLEAQDLIAK"	"[R].iHVLEAQDLIAk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"603.37292"	"1808.10422"	"1808.10459"	"-0.20"	"-0.00012"	"12/104"	"12"	"104"	"6093885.52386475"	"HCD"	"MS2"	"27.52953"	"167.5"	"100.000"	"51.1868"	"15373"	"15373"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.0"	""	"197.6"	""	"211.1"	""	"308.2"	""	"338.6"	"349.8"	""	"405"	"43"	"33.000"	"26.000"	"0.00108999630959548"	"16"	"0"	"1.237E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANINVENAFFTLAR"	"[K].aNINVENAFFTLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"603.66650"	"1808.98496"	"1808.98565"	"-0.38"	"-0.00023"	"16/138"	"16"	"138"	"1525421.65979004"	"HCD"	"MS2"	"31.23922"	"33.0"	"100.000"	"71.5538"	"23609"	"23609"	"23587"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.6"	""	"47.3"	""	"41.4"	""	"63.3"	""	"66.9"	"59.0"	""	"1268"	"36"	"38.000"	"31.000"	"0.0171826149461879"	"19"	"0"	"7.606E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANINVENAFFTLAR"	"[K].aNINVENAFFTLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"904.99652"	"1808.98577"	"1808.98565"	"0.06"	"0.00006"	"9/138"	"9"	"138"	"586802.39276123"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"71.4500"	"23567"	"23567"	"23539"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.8"	""	"48.1"	""	"45.7"	""	"66.5"	""	"71.9"	"67.8"	""	"1256"	"43"	"37.000"	"30.000"	"0.00332628642763961"	"15"	"0"	"1.298E-05"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANINVENAFFTLAR"	"[K].aNINVENAFFTLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"904.99701"	"1808.98674"	"1808.98565"	"0.60"	"0.00055"	"20/138"	"20"	"138"	"531775.182800293"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"71.3470"	"23577"	"23577"	"23546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.3"	""	"45.6"	""	"41.0"	""	"51.7"	"0.2"	"61.0"	"65.6"	""	"1254"	"40"	"37.000"	"30.000"	"0.00641604706160032"	"15"	"0"	"9.591E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVVTLPVYLNFTR"	"[K].aSVVTLPVYLNFTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"905.02618"	"1809.04509"	"1809.04719"	"-1.16"	"-0.00105"	"10/132"	"10"	"132"	"698268.014404297"	"HCD"	"MS2"	"18.58533"	"36.3"	"100.000"	"73.9296"	"24631"	"24631"	"24607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.5"	""	"42.8"	""	"48.9"	""	"67.0"	"0.4"	"67.5"	"71.6"	""	"848"	"34"	"36.000"	"29.000"	"0.0181704572648514"	"21"	"0.0001308"	"0.0002475"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVVTLPVYLNFTR"	"[K].aSVVTLPVYLNFTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.6102"	"0.0000"	"1"	"1"	"1"	"603.68671"	"1809.04557"	"1809.04719"	"-0.90"	"-0.00054"	"17/132"	"17"	"132"	"3633362.11767578"	"HCD"	"MS2"	"5.687487"	"30.5"	"100.000"	"73.9964"	"24658"	"24658"	"24639"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.3"	""	"37.2"	""	"32.8"	""	"58.2"	"1.2"	"61.9"	"62.4"	""	"835"	"59"	"36.000"	"29.000"	"5.28027425069207E-05"	""	"0"	"1.943E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVVTLPVYLNFTR"	"[K].aSVVTLPVYLNFTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"905.02643"	"1809.04558"	"1809.04719"	"-0.89"	"-0.00080"	"10/132"	"10"	"132"	"523941.101074219"	"HCD"	"MS2"	"41.1258"	"26.0"	"100.000"	"74.2342"	"24755"	"24755"	"24735"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.1"	""	"36.4"	""	"32.7"	""	"46.2"	""	"51.0"	"49.1"	""	"835"	"25"	"36.000"	"29.000"	"0.143435443248198"	"22"	"0.0001308"	"0.0002316"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVVTLPVYLNFTR"	"[K].aSVVTLPVYLNFTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"905.02704"	"1809.04680"	"1809.04719"	"-0.21"	"-0.00019"	"10/132"	"10"	"132"	"702672.700805664"	"HCD"	"MS2"	"0"	"40.8"	"100.000"	"73.9481"	"24587"	"24587"	"24561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.9"	""	"56.0"	""	"57.3"	""	"69.6"	"2.6"	"79.4"	"77.6"	""	"841"	"36"	"36.000"	"29.000"	"0.0101804271415256"	"20"	"0"	"8.315E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVVTLPVYLNFTR"	"[K].aSVVTLPVYLNFTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"3"	"905.02704"	"1809.04680"	"1809.04719"	"-0.21"	"-0.00019"	"5/132"	"5"	"132"	"521354.971618652"	"HCD"	"MS2"	"33.8603"	"27.7"	"100.000"	"74.2527"	"24711"	"24711"	"24689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.6"	""	"32.6"	""	"40.8"	""	"50.7"	""	"54.3"	"53.3"	""	"841"	"7"	"36.000"	"29.000"	"7.75828983764969"	"18"	"0.0001889"	"0.0008304"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDLHSPSEIVK"	"[R].lIDLHSPSEIVk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.70093"	"1809.08823"	"1809.08861"	"-0.21"	"-0.00013"	"8/100"	"8"	"100"	"23875395.3292236"	"HCD"	"MS2"	"18.29343"	"302.1"	"46.353"	"49.5389"	"14703"	"14703"	"14686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"413.4"	""	"420.6"	""	"464.5"	""	"515.1"	""	"570.7"	"476.5"	""	"464"	"50"	"33.000"	"26.000"	"0.000257921760729329"	"16"	"0"	"7.82E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIDLHSPSEIVK"	"[R].lIDLHSPSEIVk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"603.70117"	"1809.08896"	"1809.08861"	"0.20"	"0.00012"	"8/100"	"8"	"100"	"20758244.3082275"	"HCD"	"MS2"	"16.78699"	"252.1"	"43.662"	"49.2962"	"14560"	"14560"	"14543"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"346.1"	""	"337.5"	""	"406.6"	""	"447.5"	""	"460.5"	"389.2"	""	"442"	"51"	"33.000"	"26.000"	"0.000165345459612965"	"19"	"0"	"0.0001059"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIIEQLSSGFFSPK"	"[R].QIIEQLSSGFFSPk.[Q]"	"K14(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"905.50043"	"1809.99358"	"1809.99482"	"-0.68"	"-0.00062"	"6/146"	"6"	"146"	"85222.7975463867"	"HCD"	"MS2"	"14.78705"	"3.1"	"100.000"	"92.3058"	"31870"	"31870"	"31864"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"3.5"	""	"4.8"	""	"2.7"	""	"3.2"	"11.9"	""	"1126"	"21"	"37.000"	"30.000"	"0.429050482644307"	"18"	"0.002953"	"0.05183"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIIEQLSSGFFSPK"	"[R].QIIEQLSSGFFSPk.[Q]"	"K14(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"905.50146"	"1809.99565"	"1809.99482"	"0.46"	"0.00042"	"5/146"	"5"	"146"	"74628.3728637695"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"92.1534"	"31795"	"31795"	"31788"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.4"	""	"4.5"	""	"2.2"	""	"3.3"	""	"5.8"	"11.5"	""	"1101"	"19"	"37.000"	"30.000"	"0.759901537663888"	"18"	"0.001817"	"0.02525"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVMPSPK"	"[R].iMNTFSVMPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"604.00446"	"1809.99881"	"1810.00072"	"-1.05"	"-0.00064"	"14/118"	"14"	"118"	"13084249.0198975"	"HCD"	"MS2"	"43.6726"	"159.9"	"50.433"	"61.1269"	"19413"	"19413"	"19395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.2"	""	"243.6"	""	"241.5"	""	"179.9"	""	"281.4"	"285.8"	""	"1105"	"56"	"37.000"	"30.000"	"0.00014498807452199"	"22"	"0"	"0.0001055"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVMPSPK"	"[R].iMNTFSVMPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"905.50342"	"1809.99956"	"1810.00072"	"-0.64"	"-0.00058"	"8/118"	"8"	"118"	"791296.078125"	"HCD"	"MS2"	"17.96459"	"62.9"	"100.000"	"61.2147"	"19449"	"19449"	"19427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.6"	""	"96.7"	""	"109.1"	""	"64.6"	""	"109.6"	"107.3"	""	"1094"	"46"	"37.000"	"30.000"	"0.00138034398254688"	"18"	"0"	"0.0001654"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVMPSPK"	"[R].iMNTFSVMPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"604.00494"	"1810.00028"	"1810.00072"	"-0.24"	"-0.00015"	"14/118"	"14"	"118"	"10272119.0125732"	"HCD"	"MS2"	"34.54497"	"264.8"	"100.000"	"60.9983"	"19307"	"19307"	"19289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"455.7"	""	"418.7"	""	"381.9"	""	"313.5"	"3.2"	"443.0"	"488.9"	""	"1103"	"54"	"37.000"	"30.000"	"0.000218547335891875"	"24"	"0"	"6.005E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVMPSPK"	"[R].iMNTFSVMPSPk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"905.50433"	"1810.00139"	"1810.00072"	"0.37"	"0.00034"	"13/118"	"13"	"118"	"960951.5078125"	"HCD"	"MS2"	"23.92788"	"81.9"	"100.000"	"61.0512"	"19329"	"19329"	"19305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.4"	""	"126.8"	""	"140.9"	""	"83.5"	""	"136.0"	"148.3"	""	"1092"	"42"	"37.000"	"30.000"	"0.00309166651814886"	"20"	"0"	"6.13E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTGTDVDIVFSK"	"[K].aVTGTDVDIVFSk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"604.01703"	"1810.03653"	"1810.03624"	"0.16"	"0.00010"	"14/114"	"14"	"114"	"2122422.99060059"	"HCD"	"MS2"	"0"	"91.5"	"100.000"	"58.3486"	"18230"	"18230"	"18203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.1"	""	"107.4"	""	"127.9"	""	"164.5"	""	"190.5"	"184.6"	""	"883"	"30"	"36.000"	"29.000"	"0.0422601182476673"	"17"	"0"	"0.0001631"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTGTDVDIVFSK"	"[K].aVTGTDVDIVFSk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"604.01709"	"1810.03672"	"1810.03624"	"0.27"	"0.00016"	"14/114"	"14"	"114"	"2933206.55462646"	"HCD"	"MS2"	"0"	"115.2"	"100.000"	"58.3981"	"18304"	"18304"	"18277"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.8"	""	"146.9"	""	"164.0"	""	"207.1"	""	"215.9"	"221.6"	""	"882"	"38"	"36.000"	"29.000"	"0.00752382333550377"	"17"	"0"	"0.000125"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTGTDVDIVFSK"	"[K].aVTGTDVDIVFSk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"905.52240"	"1810.03752"	"1810.03624"	"0.71"	"0.00064"	"17/114"	"17"	"114"	"494737.353088379"	"HCD"	"MS2"	"0"	"47.6"	"100.000"	"58.3050"	"18212"	"18212"	"18187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.6"	""	"70.7"	""	"65.4"	""	"88.8"	""	"84.0"	"82.5"	""	"879"	"68"	"36.000"	"29.000"	"6.39674265915773E-06"	"18"	"0"	"4.739E-06"	"1.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTGTDVDIVFSK"	"[K].aVTGTDVDIVFSk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.9753"	"0.0000"	"1"	"1"	"1"	"905.52332"	"1810.03935"	"1810.03624"	"1.72"	"0.00156"	"19/114"	"19"	"114"	"588990.31427002"	"HCD"	"MS2"	"0"	"54.1"	"100.000"	"58.3637"	"18290"	"18290"	"18261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.3"	""	"80.5"	""	"70.5"	""	"94.7"	"0.5"	"105.6"	"97.7"	""	"863"	"81"	"36.000"	"29.000"	"3.41964324102323E-07"	"19"	"0"	"1.728E-06"	"1.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVVTLPVYLNFTR"	"[K].aSVVTLPVYLnFTR.[A]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"604.02191"	"1810.05118"	"1810.03120"	"11.04"	"0.00666"	"16/132"	"16"	"132"	"2956245.27801514"	"HCD"	"MS2"	"42.15869"	"41.0"	"100.000"	"73.9758"	"24598"	"24598"	"24577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.4"	""	"50.6"	""	"54.2"	""	"72.3"	"0.8"	"73.7"	"92.9"	""	"790"	"31"	"35.000"	"28.000"	"0.0324785846729093"	"22"	"0.0002277"	"0.001295"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLYLSDIPIHNALR"	"[R].gLYLSDIPIHNALR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9692"	"0.0000"	"1"	"1"	"1"	"604.34991"	"1811.03519"	"1811.03768"	"-1.38"	"-0.00083"	"9/112"	"9"	"112"	"7587315.3706665"	"HCD"	"MS2"	"5.650842"	"133.4"	"100.000"	"53.8783"	"16404"	"16404"	"16395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.2"	""	"173.9"	""	"200.7"	""	"215.9"	"0.9"	"244.8"	"260.8"	""	"859"	"65"	"36.000"	"29.000"	"1.42220816676773E-05"	"19"	"0"	"6.716E-06"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLYLSDIPIHNALR"	"[R].gLYLSDIPIHNALR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.35046"	"1811.03684"	"1811.03768"	"-0.47"	"-0.00028"	"10/112"	"10"	"112"	"7715648.36358643"	"HCD"	"MS2"	"0"	"130.7"	"100.000"	"54.0638"	"16532"	"16532"	"16518"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"169.4"	""	"164.4"	""	"201.1"	""	"216.9"	"6.5"	"255.2"	"225.1"	""	"847"	"58"	"36.000"	"29.000"	"6.6504864763526E-05"	"16"	"0"	"2.438E-06"	"1.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALTGDEVKK"	"[K].yALTGDEVkk.[I]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.36694"	"1811.08628"	"1811.08816"	"-1.04"	"-0.00063"	"10/80"	"10"	"80"	"4386602.30401611"	"HCD"	"MS2"	"56.36446"	"310.0"	"100.000"	"35.9347"	"9109"	"9109"	"9083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"547.1"	""	"488.0"	""	"533.1"	""	"446.6"	"1.0"	"460.9"	"448.2"	""	"496"	"5"	"33.000"	"26.000"	"7.0705253034097"	"13"	"0.0001889"	"0.000779"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSDVEAIFSK"	"[K].kSDVEAIFSk.[Y]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.36731"	"1811.08738"	"1811.08816"	"-0.43"	"-0.00026"	"7/104"	"7"	"104"	"6500647.9777832"	"HCD"	"MS2"	"20.93794"	"344.0"	"95.204"	"46.1886"	"13336"	"13336"	"13312"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"485.3"	""	"355.8"	""	"349.0"	""	"635.3"	""	"727.5"	"714.5"	""	"489"	"28"	"33.000"	"26.000"	"0.0350169941372381"	"15"	"0"	"0.0001096"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKDPFAHLPK"	"[K].akDPFAHLPk.[S]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.53378"	"1811.11330"	"1811.11465"	"-0.74"	"-0.00034"	"6/88"	"6"	"88"	"65576604.1533203"	"HCD"	"MS2"	"4.180281"	"567.8"	"29.423"	"36.3476"	"9278"	"9278"	"9258"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"831.0"	""	"740.9"	""	"804.5"	""	"951.7"	""	"1043.7"	"1009.8"	""	"338"	"4"	"32.000"	"25.000"	"7.46254056027097"	"13"	"0.0008731"	"0.008909"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKDPFAHLPK"	"[K].akDPFAHLPk.[S]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.53384"	"1811.11355"	"1811.11465"	"-0.61"	"-0.00028"	"8/88"	"8"	"88"	"68925398.0646973"	"HCD"	"MS2"	"13.61237"	"568.6"	"32.906"	"36.4365"	"9358"	"9358"	"9337"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"884.1"	""	"733.6"	""	"778.8"	""	"951.6"	"12.0"	"987.1"	"1035.4"	""	"338"	"10"	"32.000"	"25.000"	"1.81922621103442"	"13"	"0.0006037"	"0.004849"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPQVMYLDGYDR"	"[K].lLPQVMYLDGYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"604.65607"	"1811.95365"	"1811.95632"	"-1.48"	"-0.00089"	"5/120"	"5"	"120"	"1909731.45550537"	"HCD"	"MS2"	"10.47614"	"37.0"	"100.000"	"71.6466"	"23699"	"23699"	"23674"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.8"	""	"52.7"	""	"49.6"	""	"57.0"	""	"69.6"	"71.9"	""	"1158"	"27"	"37.000"	"30.000"	"0.124646062440541"	"17"	"0.0001308"	"0.0002688"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPQVMYLDGYDR"	"[K].lLPQVMYLDGYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"906.48096"	"1811.95464"	"1811.95632"	"-0.93"	"-0.00084"	"10/120"	"10"	"120"	"1157537.62005615"	"HCD"	"MS2"	"7.584957"	"45.2"	"100.000"	"71.7196"	"23677"	"23677"	"23651"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.8"	""	"62.0"	""	"73.6"	""	"51.1"	"1.8"	"87.3"	"83.1"	""	"1167"	"40"	"37.000"	"30.000"	"0.00564990129128439"	"18"	"0"	"4.389E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPQVMYLDGYDR"	"[K].lLPQVMYLDGYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"906.48138"	"1811.95549"	"1811.95632"	"-0.46"	"-0.00042"	"8/120"	"8"	"120"	"327399.401000977"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"71.9334"	"23816"	"23816"	"23793"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.4"	""	"26.7"	""	"27.4"	""	"27.5"	""	"42.9"	"36.1"	""	"1156"	"41"	"37.000"	"30.000"	"0.00447638919129856"	"24"	"0.0002277"	"0.001301"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPQVMYLDGYDR"	"[K].lLPQVMYLDGYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"604.65692"	"1811.95621"	"1811.95632"	"-0.06"	"-0.00004"	"7/120"	"7"	"120"	"2140872.81945801"	"HCD"	"MS2"	"17.93537"	"31.3"	"100.000"	"71.7586"	"23693"	"23693"	"23667"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.1"	""	"38.3"	""	"41.4"	""	"55.0"	"1.0"	"59.7"	"61.8"	""	"1141"	"35"	"37.000"	"30.000"	"0.0186747866428377"	"20"	"0"	"3.289E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPQVMYLDGYDR"	"[K].lLPQVMYLDGYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"906.48175"	"1811.95622"	"1811.95632"	"-0.05"	"-0.00005"	"5/120"	"5"	"120"	"223370.783508301"	"HCD"	"MS2"	"100"	"18.7"	"100.000"	"72.0570"	"23815"	"23815"	"23793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.1"	""	"30.3"	""	"25.3"	""	"24.6"	""	"27.7"	"47.0"	""	"1141"	"3"	"37.000"	"30.000"	"28.006294334506"	"15"	"0.002772"	"0.045"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVGGMTDVAEIK"	"[R].fSVGGMTDVAEIk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"Q924S5"	"Lon protease homolog, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lonp1 PE=2 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"906.50098"	"1811.99468"	"1811.99774"	"-1.69"	"-0.00153"	"11/114"	"11"	"114"	"199667.108703613"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"60.4726"	"19093"	"19093"	"19065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.7"	""	"27.6"	""	"32.0"	""	"26.5"	"1.5"	"40.3"	"38.9"	""	"1118"	"19"	"37.000"	"30.000"	"0.63010337800211"	"20"	"0.0001889"	"0.0009306"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGSSVIWVTFK"	"[R].dDGSSVIWVTFk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"906.50513"	"1812.00298"	"1811.99437"	"4.75"	"0.00430"	"8/106"	"8"	"106"	"610014.743591309"	"HCD"	"MS2"	"0"	"54.9"	"100.000"	"68.5725"	"22393"	"22393"	"22362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.2"	""	"70.9"	""	"79.1"	""	"105.9"	""	"86.7"	"99.3"	""	"1038"	"40"	"37.000"	"30.000"	"0.00500227263260841"	"18"	"7.476E-05"	"0.0002014"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WSPVASTLPELVQR"	"[R].wSPVASTLPELVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"906.51361"	"1812.01995"	"1812.02170"	"-0.97"	"-0.00088"	"12/122"	"12"	"122"	"424001.282348633"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"65.5714"	"21228"	"21228"	"21203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.1"	""	"24.7"	""	"25.4"	""	"46.4"	""	"46.2"	"50.4"	""	"933"	"58"	"36.000"	"29.000"	"7.49638094530507E-05"	"22"	"0"	"6.045E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WSPVASTLPELVQR"	"[R].wSPVASTLPELVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.67822"	"1812.02011"	"1812.02170"	"-0.87"	"-0.00053"	"14/122"	"14"	"122"	"3066829.22839355"	"HCD"	"MS2"	"28.8468"	"59.2"	"100.000"	"65.4906"	"21195"	"21195"	"21171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.7"	""	"68.4"	""	"76.2"	""	"107.3"	""	"118.9"	"122.8"	""	"927"	"26"	"36.000"	"29.000"	"0.112732655820571"	"14"	"0"	"3.678E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WSPVASTLPELVQR"	"[R].wSPVASTLPELVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.67865"	"1812.02140"	"1812.02170"	"-0.17"	"-0.00010"	"15/122"	"15"	"122"	"3014994.86029053"	"HCD"	"MS2"	"41.2526"	"59.8"	"100.000"	"65.5474"	"21165"	"21165"	"21145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.8"	""	"73.0"	""	"67.3"	""	"112.8"	"0.5"	"122.2"	"118.9"	""	"940"	"35"	"36.000"	"29.000"	"0.0141285586223527"	"15"	"0"	"8.202E-06"	"1.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WSPVASTLPELVQR"	"[R].wSPVASTLPELVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"906.51477"	"1812.02226"	"1812.02170"	"0.31"	"0.00028"	"9/122"	"9"	"122"	"368749.889648438"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"65.5285"	"21158"	"21158"	"21129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.0"	""	"18.4"	""	"20.8"	""	"44.3"	"1.0"	"36.9"	"38.9"	""	"931"	"46"	"36.000"	"29.000"	"0.00106149923451619"	"19"	"0"	"0.0001083"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIIWDSYTTNK"	"[K].lIIWDSYTTNk.[VM]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"3"	"3"	"0.4359"	"0.0000"	"1"	"1"	"1"	"604.68170"	"1812.03055"	"1812.03076"	"-0.11"	"-0.00007"	"11/90"	"11"	"90"	"6285850.65289307"	"HCD"	"MS2"	"17.2462"	"155.5"	"100.000"	"64.4809"	"20783"	"20783"	"20755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.1"	""	"235.6"	""	"207.6"	""	"274.9"	"0.3"	"303.9"	"323.1"	""	"917"	"39"	"36.000"	"29.000"	"0.00598879352208449"	""	"0"	"0.0001431"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIIWDSYTTNK"	"[K].lIIWDSYTTNk.[VM]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"0.6393"	"0.0000"	"1"	"1"	"1"	"906.51904"	"1812.03081"	"1812.03076"	"0.03"	"0.00003"	"9/90"	"9"	"90"	"1352427.90167236"	"HCD"	"MS2"	"0"	"106.9"	"100.000"	"64.4640"	"20723"	"20723"	"20697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.8"	""	"158.9"	""	"141.0"	""	"186.6"	"0.1"	"223.5"	"228.2"	""	"907"	"61"	"36.000"	"29.000"	"3.84217632312761E-05"	""	"0"	"1.054E-05"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIIWDSYTTNK"	"[K].lIIWDSYTTNk.[VM]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"906.51917"	"1812.03105"	"1812.03076"	"0.16"	"0.00015"	"10/90"	"10"	"90"	"1462111.14129639"	"HCD"	"MS2"	"0"	"108.9"	"100.000"	"64.4832"	"20784"	"20784"	"20755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.3"	""	"170.0"	""	"142.9"	""	"180.7"	"3.7"	"213.7"	"237.2"	""	"915"	"57"	"36.000"	"29.000"	"8.61769458441584E-05"	""	"0"	"1.258E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIIWDSYTTNK"	"[K].lIIWDSYTTNk.[VM]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"604.68256"	"1812.03312"	"1812.03076"	"1.30"	"0.00079"	"8/90"	"8"	"90"	"6331229.30200195"	"HCD"	"MS2"	"7.238769"	"158.2"	"100.000"	"64.4846"	"20731"	"20731"	"20713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.7"	""	"233.6"	""	"224.8"	""	"273.7"	""	"330.0"	"321.5"	""	"924"	"54"	"36.000"	"29.000"	"0.000202601182372043"	""	"0"	"5.804E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLTEPPMNPTK"	"[K].iLLTEPPMNPTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"906.53796"	"1812.06865"	"1812.07051"	"-1.03"	"-0.00093"	"10/108"	"10"	"108"	"1863442.34606934"	"HCD"	"MS2"	"0"	"94.1"	"100.000"	"56.2302"	"17364"	"17364"	"17339"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"179.7"	""	"151.9"	""	"133.8"	""	"79.9"	"2.7"	"165.6"	"176.3"	""	"637"	"61"	"35.000"	"28.000"	"2.67984352613994E-05"	"23"	"0"	"5.786E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLTEPPMNPTK"	"[K].iLLTEPPMNPTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"604.69458"	"1812.06919"	"1812.07051"	"-0.73"	"-0.00044"	"13/108"	"13"	"108"	"13824607.3358154"	"HCD"	"MS2"	"15.93516"	"287.4"	"100.000"	"56.4635"	"17513"	"17513"	"17493"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"503.6"	""	"453.8"	""	"422.2"	""	"303.8"	""	"495.4"	"543.3"	""	"623"	"56"	"34.000"	"27.000"	"8.44224693333997E-05"	"18"	"0"	"3.033E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLTEPPMNPTK"	"[K].iLLTEPPMNPTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"906.53845"	"1812.06963"	"1812.07051"	"-0.49"	"-0.00044"	"10/108"	"10"	"108"	"653691.024475098"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"56.7952"	"17649"	"17649"	"17621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.8"	""	"70.5"	""	"53.4"	""	"60.0"	"1.6"	"73.5"	"66.5"	""	"632"	"19"	"34.000"	"28.000"	"0.436201427614511"	"14"	"0.0001889"	"0.0006279"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLTEPPMNPTK"	"[K].iLLTEPPMNPTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"906.53876"	"1812.07024"	"1812.07051"	"-0.15"	"-0.00014"	"10/108"	"10"	"108"	"1864723.91619873"	"HCD"	"MS2"	"0"	"93.8"	"100.000"	"56.4378"	"17503"	"17503"	"17477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.5"	""	"152.4"	""	"132.3"	""	"77.2"	"2.7"	"168.8"	"178.5"	""	"627"	"62"	"34.000"	"27.000"	"1.98718154479047E-05"	"23"	"0"	"3.466E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLTEPPMNPTK"	"[K].iLLTEPPMNPTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"604.69507"	"1812.07065"	"1812.07051"	"0.08"	"0.00005"	"12/108"	"12"	"108"	"3731745.60400391"	"HCD"	"MS2"	"22.35745"	"107.0"	"100.000"	"56.7860"	"17645"	"17645"	"17621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.9"	""	"158.1"	""	"159.6"	""	"136.9"	"2.9"	"195.5"	"188.5"	""	"616"	"53"	"34.000"	"27.000"	"0.000169258589148148"	"18"	"0"	"0.0001394"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLTEPPMNPTK"	"[K].iLLTEPPMNPTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.8983"	"0.0000"	"1"	"1"	"1"	"604.69513"	"1812.07083"	"1812.07051"	"0.18"	"0.00011"	"13/108"	"13"	"108"	"14928771.1858521"	"HCD"	"MS2"	"14.4262"	"321.6"	"100.000"	"56.2923"	"17389"	"17389"	"17371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"545.5"	""	"466.9"	""	"471.9"	""	"331.9"	"2.3"	"601.8"	"625.9"	""	"620"	"59"	"34.000"	"27.000"	"3.66742882274801E-05"	"22"	"0"	"1.54E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLTEPPMNPTK"	"[K].iLLTEPPMNPTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"906.53979"	"1812.07231"	"1812.07051"	"0.99"	"0.00090"	"14/108"	"14"	"108"	"901070.258850098"	"HCD"	"MS2"	"0"	"52.3"	"100.000"	"56.5440"	"17492"	"17492"	"17467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.0"	""	"79.8"	""	"69.5"	""	"54.3"	"2.0"	"98.1"	"102.6"	""	"611"	"35"	"34.000"	"27.000"	"0.00868982868325338"	"19"	"0"	"0.0001572"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQNLLILTAIK"	"[R].nLQNLLILTAIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7451"	"0.0000"	"1"	"1"	"1"	"604.72821"	"1812.17008"	"1812.17228"	"-1.21"	"-0.00073"	"12/110"	"12"	"110"	"4346517.09020996"	"HCD"	"MS2"	"6.304666"	"92.6"	"100.000"	"82.9215"	"28287"	"28287"	"28269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.7"	""	"101.7"	""	"132.1"	""	"170.3"	""	"177.6"	"199.2"	""	"87"	"51"	"26.000"	"19.000"	"3.23213324985065E-05"	""	"0"	"6.379E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQNLLILTAIK"	"[R].nLQNLLILTAIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"906.58875"	"1812.17021"	"1812.17228"	"-1.14"	"-0.00103"	"13/110"	"13"	"110"	"132662.588867188"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"83.1313"	"28373"	"28373"	"28349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.9"	""	"12.5"	""	"14.6"	""	"13.1"	""	"21.8"	"22.7"	""	"87"	"56"	"26.000"	"19.000"	"1.10787115987449E-05"	""	"0"	"4.62E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQNLLILTAIK"	"[R].nLQNLLILTAIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"906.58942"	"1812.17156"	"1812.17228"	"-0.40"	"-0.00036"	"9/110"	"9"	"110"	"105516.012756348"	"HCD"	"MS2"	"10.77085"	"8.8"	"100.000"	"83.1434"	"28327"	"28327"	"28303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.5"	""	"8.5"	"1.7"	"8.4"	""	"15.0"	""	"17.2"	"22.1"	""	"84"	"28"	"26.000"	"19.000"	"0.00682730477415203"	"14"	"0.0009404"	"0.009691"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQNLLILTAIK"	"[R].nLQNLLILTAIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"906.58948"	"1812.17168"	"1812.17228"	"-0.33"	"-0.00030"	"14/110"	"14"	"110"	"355642.891235352"	"HCD"	"MS2"	"38.51778"	"26.1"	"100.000"	"82.8200"	"28246"	"28246"	"28221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.2"	""	"27.0"	""	"36.8"	""	"52.3"	""	"46.0"	"56.4"	""	"84"	"52"	"26.000"	"19.000"	"2.65612977578012E-05"	""	"0"	"9.291E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQNLLILTAIK"	"[R].nLQNLLILTAIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7571"	"0.0000"	"1"	"1"	"1"	"906.58960"	"1812.17192"	"1812.17228"	"-0.20"	"-0.00018"	"15/110"	"15"	"110"	"447345.416137695"	"HCD"	"MS2"	"10.79859"	"32.3"	"100.000"	"82.8253"	"28197"	"28197"	"28176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.5"	""	"37.2"	""	"43.5"	""	"64.3"	""	"51.5"	"72.8"	""	"84"	"70"	"26.000"	"19.000"	"4.18070275287642E-07"	""	"0"	"5.224E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQNLLILTAIK"	"[R].nLQNLLILTAIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"604.72894"	"1812.17228"	"1812.17228"	"0.00"	"0.00000"	"10/110"	"10"	"110"	"558783.925537109"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"83.2101"	"28354"	"28354"	"28335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.0"	""	"25.7"	""	"25.8"	""	"30.3"	"1.1"	"41.4"	"31.8"	""	"76"	"30"	"25.000"	"18.000"	"0.00351385306096525"	"16"	"0"	"0.0001109"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQNLLILTAIK"	"[R].nLQNLLILTAIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"604.72919"	"1812.17301"	"1812.17228"	"0.40"	"0.00024"	"12/110"	"12"	"110"	"549668.602172852"	"HCD"	"MS2"	"18.42204"	"15.3"	"100.000"	"83.2418"	"28418"	"28418"	"28397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.0"	""	"18.4"	""	"16.3"	""	"31.3"	""	"27.8"	"33.2"	""	"78"	"35"	"25.000"	"18.000"	"0.00128844121004358"	""	"0"	"4.548E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQNLLILTAIK"	"[R].nLQNLLILTAIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7381"	"0.0000"	"1"	"1"	"1"	"604.72925"	"1812.17319"	"1812.17228"	"0.50"	"0.00030"	"11/110"	"11"	"110"	"3833346.19628906"	"HCD"	"MS2"	"2.115835"	"87.5"	"100.000"	"82.8990"	"28227"	"28227"	"28208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.3"	""	"106.7"	""	"121.4"	""	"159.1"	""	"167.8"	"192.7"	""	"78"	"42"	"25.000"	"18.000"	"0.000273567566383789"	""	"0"	"5.892E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPNIPFQMLLR"	"[R].eLIPNIPFQMLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"605.02466"	"1813.05942"	"1813.06073"	"-0.72"	"-0.00044"	"6/112"	"6"	"112"	"148120.287475586"	"HCD"	"MS2"	"19.37993"	"3.9"	"100.000"	"91.1149"	"31468"	"31468"	"31461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.2"	""	"8.8"	""	"6.2"	""	"6.6"	""	"5.5"	"6.5"	""	"675"	"22"	"35.000"	"28.000"	"0.223498069999344"	"15"	"0.0006037"	"0.005837"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPNIPFQMLLR"	"[R].eLIPNIPFQMLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"907.03339"	"1813.05950"	"1813.06073"	"-0.68"	"-0.00062"	"4/112"	"4"	"112"	"81648.0561523438"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"91.1124"	"31467"	"31467"	"31461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"3.8"	""	"3.7"	""	"3.7"	""	"2.8"	"3.7"	""	"675"	"12"	"35.000"	"28.000"	"2.0477351123612"	"13"	"0.002829"	"0.04821"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPNIPFQMLLR"	"[R].eLIPNIPFQMLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"907.03400"	"1813.06072"	"1813.06073"	"-0.01"	"-0.00001"	"3/112"	"3"	"112"	"55304.7384033203"	"HCD"	"MS2"	"0"	"1.5"	"100.000"	"91.2385"	"31483"	"31483"	"31475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.9"	""	"3.1"	""	"2.7"	""	"2.2"	""	""	"3.7"	""	"667"	"5"	"35.000"	"28.000"	"11.5370782505012"	"13"	"0.00274"	"0.04317"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPNIPFQMLLR"	"[R].eLIPNIPFQMLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"605.02515"	"1813.06089"	"1813.06073"	"0.09"	"0.00005"	"7/112"	"7"	"112"	"172732.712524414"	"HCD"	"MS2"	"17.22477"	"4.3"	"100.000"	"90.9834"	"31392"	"31392"	"31382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"4.6"	""	"5.8"	""	"8.9"	""	"7.5"	"8.4"	""	"667"	"18"	"35.000"	"28.000"	"0.561171799367001"	"14"	"0.00119"	"0.01605"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPNIPFQMLLR"	"[R].eLIPNIPFQMLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"907.03455"	"1813.06182"	"1813.06073"	"0.60"	"0.00054"	"3/112"	"3"	"112"	"68095.2655029297"	"HCD"	"MS2"	"0"	"2.4"	"100.000"	"90.9693"	"31387"	"31387"	"31381"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"1.7"	""	"3.2"	""	"3.6"	""	"4.4"	"4.1"	""	"666"	"1"	"35.000"	"28.000"	"28.0830474335503"	"13"	"0.003818"	"0.0963"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGVPPPQIFWK"	"[R].vSGVPPPQIFWk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"605.03027"	"1813.07627"	"1813.07765"	"-0.76"	"-0.00046"	"5/96"	"5"	"96"	"4500624.31237793"	"HCD"	"MS2"	"25.85294"	"115.8"	"100.000"	"66.3703"	"21501"	"21501"	"21481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.5"	""	"143.9"	""	"153.0"	""	"191.6"	""	"227.8"	"210.1"	""	"528"	"28"	"34.000"	"27.000"	"0.0405138883459014"	"14"	"7.476E-05"	"0.0001957"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGVPPPQIFWK"	"[R].vSGVPPPQIFWk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"907.04218"	"1813.07707"	"1813.07765"	"-0.32"	"-0.00029"	"11/96"	"11"	"96"	"452236.45904541"	"HCD"	"MS2"	"9.139926"	"26.2"	"100.000"	"66.6437"	"21666"	"21666"	"21635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.7"	""	"36.3"	""	"46.8"	""	"32.4"	""	"52.1"	"49.0"	""	"518"	"35"	"34.000"	"27.000"	"0.00869560420889252"	"15"	"0.0002277"	"0.001307"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGVPPPQIFWK"	"[R].vSGVPPPQIFWk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"907.04224"	"1813.07720"	"1813.07765"	"-0.25"	"-0.00023"	"12/96"	"12"	"96"	"375242.538269043"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"66.7390"	"21652"	"21652"	"21625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.5"	""	"33.8"	""	"40.8"	""	"40.0"	"0.6"	"38.8"	"37.6"	""	"525"	"32"	"34.000"	"27.000"	"0.0173831832221713"	"14"	"0.0001889"	"0.0004644"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGVPPPQIFWK"	"[R].vSGVPPPQIFWk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"907.04224"	"1813.07720"	"1813.07765"	"-0.25"	"-0.00023"	"11/96"	"11"	"96"	"952576.896484375"	"HCD"	"MS2"	"0"	"49.1"	"100.000"	"66.2308"	"21497"	"21497"	"21475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.2"	""	"63.0"	""	"76.6"	""	"76.3"	""	"86.9"	"83.1"	""	"525"	"39"	"34.000"	"27.000"	"0.00323690018722588"	"17"	"0.0001859"	"0.0003247"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGVPPPQIFWK"	"[R].vSGVPPPQIFWk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"907.04266"	"1813.07805"	"1813.07765"	"0.22"	"0.00020"	"7/96"	"7"	"96"	"882394.734375"	"HCD"	"MS2"	"0"	"46.2"	"100.000"	"66.3378"	"21488"	"21488"	"21465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.2"	""	"57.5"	""	"68.0"	""	"63.9"	""	"91.7"	"91.0"	""	"521"	"45"	"34.000"	"27.000"	"0.000797641474476422"	"16"	"0.0001889"	"0.0003858"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKPLATTQPAK"	"[K].akPLATTQPAk.[T]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"605.05511"	"1813.15079"	"1813.15143"	"-0.35"	"-0.00021"	"12/100"	"12"	"100"	"2907435.14837646"	"HCD"	"MS2"	"0"	"157.3"	"100.000"	"30.0076"	"6735"	"6735"	"6713"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.8"	""	"139.5"	"3.6"	"185.6"	""	"360.3"	""	"362.7"	"304.4"	""	"194"	"26"	"29.000"	"22.000"	"0.0241975688513467"	"14"	"0"	"3.552E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKPLATTQPAK"	"[K].akPLATTQPAk.[T]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"605.05536"	"1813.15152"	"1813.15143"	"0.05"	"0.00003"	"7/100"	"7"	"100"	"1073608.96704102"	"HCD"	"MS2"	"0"	"72.8"	"100.000"	"30.0117"	"6696"	"6696"	"6666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.1"	""	"78.4"	""	"88.3"	""	"145.7"	""	"167.2"	"146.3"	""	"187"	"15"	"29.000"	"22.000"	"0.308185080885923"	"13"	"0"	"3.881E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFIGGLSWDTTK"	"[K].mFIGGLSWDTTk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"907.49982"	"1813.99236"	"1813.99226"	"0.05"	"0.00005"	"11/96"	"11"	"96"	"538000.75769043"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"70.7041"	"23314"	"23314"	"23290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.1"	""	"69.9"	""	"57.2"	""	"76.7"	"3.6"	"94.2"	"108.7"	""	"1030"	"72"	"37.000"	"30.000"	"3.4818273232687E-06"	"19"	"0"	"3.714E-06"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLYNSVVSNSSK"	"[R].aSLYNSVVSNSSk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"907.50653"	"1814.00578"	"1814.00600"	"-0.12"	"-0.00011"	"17/132"	"17"	"132"	"1209740.87298584"	"HCD"	"MS2"	"0"	"97.5"	"100.000"	"40.5587"	"11047"	"11047"	"11021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.6"	""	"118.9"	""	"128.7"	""	"172.5"	""	"189.6"	"190.5"	""	"996"	"53"	"36.000"	"29.000"	"0.000254817554099074"	"23"	"0"	"4.555E-06"	"1.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLYNSVVSNSSK"	"[R].aSLYNSVVSNSSk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"907.50690"	"1814.00652"	"1814.00600"	"0.29"	"0.00026"	"12/132"	"12"	"132"	"1167707.64807129"	"HCD"	"MS2"	"0"	"93.6"	"100.000"	"40.3848"	"10932"	"10932"	"10901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.8"	""	"120.6"	""	"127.2"	""	"164.7"	"1.0"	"184.9"	"171.8"	""	"1007"	"76"	"37.000"	"30.000"	"1.35831180423602E-06"	"20"	"0"	"1.072E-06"	"1.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLYNSVVSNSSK"	"[R].aSLYNSVVSNSSk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"605.34039"	"1814.00663"	"1814.00600"	"0.35"	"0.00021"	"12/132"	"12"	"132"	"7973958.7522583"	"HCD"	"MS2"	"16.65513"	"250.2"	"77.325"	"40.5887"	"11059"	"11059"	"11037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"334.9"	""	"345.5"	""	"350.7"	""	"379.9"	"1.9"	"493.9"	"465.3"	""	"1007"	"39"	"37.000"	"30.000"	"0.00612349651325446"	"15"	"0"	"6.36E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEPLNNLQVAVK"	"[K].mEPLNNLQVAVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9639"	"0.0000"	"1"	"1"	"1"	"907.53351"	"1814.05974"	"1814.06101"	"-0.70"	"-0.00064"	"11/102"	"11"	"102"	"1099665.45898438"	"HCD"	"MS2"	"0"	"85.0"	"100.000"	"54.9324"	"16833"	"16833"	"16812"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.5"	""	"115.9"	""	"114.0"	""	"96.5"	""	"173.0"	"172.0"	""	"697"	"83"	"35.000"	"28.000"	"1.95525219647316E-07"	"21"	"0"	"1.698E-06"	"1.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEPLNNLQVAVK"	"[K].mEPLNNLQVAVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"907.53412"	"1814.06096"	"1814.06101"	"-0.03"	"-0.00003"	"10/102"	"10"	"102"	"1074304.25964355"	"HCD"	"MS2"	"38.33772"	"88.4"	"100.000"	"55.1176"	"16963"	"16963"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.5"	""	"115.4"	""	"129.4"	""	"101.9"	"0.6"	"172.9"	"162.7"	""	"695"	"73"	"35.000"	"28.000"	"1.84058046752351E-06"	"17"	"0"	"5.056E-06"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEPLNNLQVAVK"	"[K].mEPLNNLQVAVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"605.35901"	"1814.06247"	"1814.06101"	"0.81"	"0.00049"	"13/102"	"13"	"102"	"9476433.02313232"	"HCD"	"MS2"	"34.66842"	"231.7"	"100.000"	"55.1061"	"16958"	"16958"	"16933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"369.4"	"2.8"	"339.4"	""	"354.3"	""	"289.9"	""	"396.2"	"442.3"	""	"693"	"29"	"35.000"	"28.000"	"0.0393281247630457"	"20"	"0.0001308"	"0.0002146"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEPLNNLQVAVK"	"[K].mEPLNNLQVAVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"605.35907"	"1814.06266"	"1814.06101"	"0.91"	"0.00055"	"13/102"	"13"	"102"	"8195730.62713623"	"HCD"	"MS2"	"26.78658"	"201.9"	"100.000"	"54.8956"	"16818"	"16818"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"318.7"	""	"290.2"	""	"310.5"	""	"255.9"	"0.4"	"354.4"	"380.8"	""	"694"	"31"	"35.000"	"28.000"	"0.0278823564398409"	"22"	"0.0001308"	"0.0002369"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASKE"	"[R].vVDLMAYMASkE.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"1"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"907.99200"	"1814.97673"	"1814.97965"	"-1.61"	"-0.00146"	"10/106"	"10"	"106"	"967867.865722656"	"HCD"	"MS2"	"0"	"76.6"	"100.000"	"78.6908"	"26562"	"26562"	"26543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.1"	""	"150.0"	""	"136.7"	""	"52.6"	""	"46.6"	"81.5"	""	"1006"	"70"	"37.000"	"30.000"	"5.55351545810743E-06"	"20"	"0"	"3.85E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASKE"	"[R].vVDLMAYMASkE.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"1"	"2"	"2"	"0.9726"	"0.0000"	"1"	"1"	"1"	"907.99219"	"1814.97710"	"1814.97965"	"-1.41"	"-0.00128"	"10/106"	"10"	"106"	"754616.719726563"	"HCD"	"MS2"	"23.29338"	"62.0"	"100.000"	"78.7125"	"26520"	"26520"	"26497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.7"	""	"125.7"	""	"105.0"	""	"35.5"	"4.0"	"46.8"	"67.0"	""	"1002"	"73"	"36.000"	"30.000"	"2.44814832030759E-06"	"19"	"0"	"1.093E-05"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASKE"	"[R].vVDLMAYMASkE.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"1"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"605.66418"	"1814.97800"	"1814.97965"	"-0.91"	"-0.00055"	"6/106"	"6"	"106"	"3016225.42102051"	"HCD"	"MS2"	"11.23343"	"70.3"	"100.000"	"78.6964"	"26514"	"26514"	"26497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"216.1"	""	"133.9"	""	"122.1"	""	"46.3"	""	"60.5"	"82.7"	""	"1003"	"39"	"37.000"	"30.000"	"0.00681194193463458"	"21"	"0.0001889"	"0.000732"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASKE"	"[R].vVDLMAYMASkE.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"907.99280"	"1814.97832"	"1814.97965"	"-0.73"	"-0.00067"	"10/106"	"10"	"106"	"550085.323486328"	"HCD"	"MS2"	"12.17923"	"46.4"	"100.000"	"79.0044"	"26690"	"26690"	"26671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.4"	""	"82.9"	""	"85.4"	""	"26.4"	"0.1"	"30.8"	"77.4"	""	"1000"	"66"	"36.000"	"30.000"	"1.25305462651606E-05"	"17"	"0"	"2.341E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASKE"	"[R].vVDLMAYMASkE.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"1"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"605.66443"	"1814.97873"	"1814.97965"	"-0.50"	"-0.00031"	"12/106"	"12"	"106"	"4445794.00683594"	"HCD"	"MS2"	"9.762068"	"89.9"	"100.000"	"78.9585"	"26672"	"26672"	"26655"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"239.4"	""	"152.0"	""	"162.7"	""	"57.2"	"0.6"	"66.6"	"166.3"	""	"1003"	"37"	"37.000"	"30.000"	"0.00935989414953588"	"16"	"0.0001308"	"0.0003048"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASKE"	"[R].vVDLMAYMASkE.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"605.66455"	"1814.97910"	"1814.97965"	"-0.30"	"-0.00018"	"10/106"	"10"	"106"	"2758706.2409668"	"HCD"	"MS2"	"7.461674"	"68.8"	"100.000"	"78.6493"	"26545"	"26545"	"26527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.6"	""	"126.9"	""	"128.8"	""	"54.9"	"0.1"	"62.5"	"80.8"	""	"1000"	"26"	"36.000"	"30.000"	"0.11667290311405"	"14"	"0.0001889"	"0.0006273"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASKE"	"[R].vVDLMAYMASkE.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"1"	"2"	"2"	"0.9437"	"0.0000"	"1"	"1"	"1"	"907.99359"	"1814.97991"	"1814.97965"	"0.14"	"0.00013"	"10/106"	"10"	"106"	"801481.354125977"	"HCD"	"MS2"	"8.156379"	"65.0"	"100.000"	"79.0144"	"26643"	"26643"	"26625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.5"	""	"113.3"	""	"114.7"	""	"32.6"	""	"44.5"	"113.3"	""	"1004"	"71"	"37.000"	"30.000"	"4.2628859846823E-06"	"21"	"0"	"9.264E-06"	"1.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDLMAYMASKE"	"[R].vVDLMAYMASkE.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"1"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"605.66486"	"1814.98001"	"1814.97965"	"0.20"	"0.00012"	"11/106"	"11"	"106"	"4443519.37750244"	"HCD"	"MS2"	"9.889073"	"100.6"	"100.000"	"79.0100"	"26642"	"26642"	"26625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"272.7"	""	"176.9"	""	"162.4"	""	"65.9"	"5.0"	"74.0"	"188.2"	""	"1009"	"34"	"37.000"	"30.000"	"0.0210310603960784"	"16"	"0.0001889"	"0.0004972"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSAYESLMEIVK"	"[R].sSAYESLMEIVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.5778"	"0.0000"	"1"	"1"	"1"	"605.66980"	"1814.99485"	"1814.99741"	"-1.41"	"-0.00085"	"7/104"	"7"	"104"	"2256496.59594727"	"HCD"	"MS2"	"32.77978"	"72.5"	"100.000"	"68.7072"	"22499"	"22499"	"22474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.8"	""	"89.7"	""	"103.8"	""	"101.3"	"3.9"	"131.0"	"149.2"	""	"1045"	"45"	"37.000"	"30.000"	"0.00164091579255032"	""	"0"	"0.0001089"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSAYESLMEIVK"	"[R].sSAYESLMEIVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.5577"	"0.0000"	"1"	"1"	"1"	"605.67096"	"1814.99833"	"1814.99741"	"0.51"	"0.00031"	"7/104"	"7"	"104"	"3328632.28070068"	"HCD"	"MS2"	"13.25181"	"91.7"	"100.000"	"68.7828"	"22478"	"22478"	"22458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.3"	""	"125.6"	""	"121.8"	""	"125.2"	"3.5"	"192.5"	"177.6"	""	"1016"	"52"	"37.000"	"30.000"	"0.000337958763350484"	""	"0"	"3.791E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDAFLASESLIK"	"[K].yDAFLASESLIk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"605.68311"	"1815.03476"	"1815.03042"	"2.39"	"0.00145"	"8/102"	"8"	"102"	"4095909.42346191"	"HCD"	"MS2"	"81.01139"	"93.7"	"100.000"	"69.3389"	"22757"	"22757"	"22730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.1"	""	"148.9"	""	"122.8"	""	"143.0"	""	"174.3"	"168.4"	""	"848"	"18"	"36.000"	"29.000"	"0.679776045652578"	"14"	"7.476E-05"	"0.0001985"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"908.48657"	"1815.96587"	"1815.97153"	"-3.12"	"-0.00283"	"10/116"	"10"	"116"	"911175.575195313"	"HCD"	"MS2"	"24.17782"	"78.1"	"100.000"	"70.8855"	"23336"	"23336"	"23315"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.1"	""	"124.6"	""	"99.1"	""	"90.9"	"4.1"	"155.1"	"137.9"	""	"1055"	"60"	"37.000"	"30.000"	"5.04919872608031E-05"	"20"	"0"	"3.702E-06"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"605.99359"	"1815.96622"	"1815.97153"	"-2.92"	"-0.00177"	"13/116"	"13"	"116"	"4736091.97070313"	"HCD"	"MS2"	"49.27942"	"117.4"	"100.000"	"70.8577"	"23325"	"23325"	"23299"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.3"	""	"174.0"	""	"152.8"	""	"153.9"	"2.4"	"214.7"	"231.1"	""	"1061"	"20"	"37.000"	"30.000"	"0.493952727935685"	"24"	"0.0001889"	"0.0004374"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.5652"	"0.0000"	"1"	"1"	"1"	"605.99384"	"1815.96695"	"1815.97153"	"-2.52"	"-0.00152"	"12/116"	"12"	"116"	"3828163.8338623"	"HCD"	"MS2"	"24.24218"	"102.9"	"100.000"	"70.6996"	"23312"	"23312"	"23290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.3"	""	"155.2"	""	"151.0"	""	"129.0"	""	"193.2"	"189.5"	""	"1071"	"23"	"37.000"	"30.000"	"0.265313577175965"	"23"	"0.0001889"	"0.0004103"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"605.99408"	"1815.96769"	"1815.97153"	"-2.12"	"-0.00128"	"9/116"	"9"	"116"	"1333309.38867188"	"HCD"	"MS2"	"44.38276"	"38.9"	"100.000"	"71.9880"	"23787"	"23787"	"23761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.5"	""	"55.3"	""	"61.4"	""	"53.5"	""	"80.6"	"66.1"	""	"1066"	"33"	"37.000"	"30.000"	"0.0241950881674558"	"23"	"0.0001308"	"0.0002997"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"908.48822"	"1815.96916"	"1815.97153"	"-1.30"	"-0.00118"	"10/116"	"10"	"116"	"955379.985656738"	"HCD"	"MS2"	"9.142419"	"78.6"	"100.000"	"70.7756"	"23343"	"23343"	"23322"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.4"	""	"116.1"	""	"112.8"	""	"91.0"	"2.1"	"148.0"	"155.8"	""	"1070"	"58"	"37.000"	"30.000"	"7.8587555853947E-05"	"28"	"0"	"9.305E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"908.48846"	"1815.96965"	"1815.97153"	"-1.03"	"-0.00094"	"11/116"	"11"	"116"	"789620.587097168"	"HCD"	"MS2"	"0"	"73.7"	"100.000"	"71.2797"	"23497"	"23497"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.6"	""	"54.4"	""	"88.2"	""	"49.4"	"1.3"	"307.4"	"140.6"	""	"1068"	"84"	"37.000"	"30.000"	"2.23635763772968E-07"	""	"0"	"1.897E-06"	"1.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"605.99475"	"1815.96970"	"1815.97153"	"-1.01"	"-0.00061"	"8/116"	"8"	"116"	"3054664.49938965"	"HCD"	"MS2"	"12.23702"	"85.7"	"100.000"	"71.4017"	"23547"	"23547"	"23523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.8"	""	"94.8"	""	"110.4"	""	"71.0"	""	"289.1"	"170.8"	""	"1069"	"45"	"37.000"	"30.000"	"0.00178627248893958"	"27"	"0"	"4.494E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8280"	"0.0000"	"1"	"1"	"1"	"908.48853"	"1815.96977"	"1815.97153"	"-0.97"	"-0.00088"	"11/116"	"11"	"116"	"683238.608703613"	"HCD"	"MS2"	"0"	"63.8"	"100.000"	"69.0693"	"22647"	"22647"	"22618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.8"	""	"112.4"	""	"94.4"	""	"53.9"	"0.8"	"110.9"	"111.2"	""	"1064"	"93"	"37.000"	"30.000"	"2.48262790327201E-08"	""	"0"	"8.108E-07"	"1.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"908.48853"	"1815.96977"	"1815.97153"	"-0.97"	"-0.00088"	"11/116"	"11"	"116"	"114009110.194336"	"HCD"	"MS2"	"0"	"536.4"	"5.959"	"69.7615"	"22930"	"22930"	"22913"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"984.6"	""	"852.5"	""	"743.3"	""	"441.9"	"20.6"	"1002.2"	"1034.8"	""	"1064"	"84"	"37.000"	"30.000"	"2.30097358110625E-07"	"28"	"0"	"1.839E-05"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"605.99481"	"1815.96988"	"1815.97153"	"-0.91"	"-0.00055"	"12/116"	"12"	"116"	"4871966.56323242"	"HCD"	"MS2"	"9.229912"	"122.1"	"98.641"	"70.3765"	"23180"	"23180"	"23162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.1"	""	"199.9"	""	"161.8"	""	"129.3"	""	"229.9"	"240.0"	""	"1064"	"39"	"37.000"	"30.000"	"0.00724288571071886"	"19"	"0.0001308"	"0.0002369"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"908.48865"	"1815.97002"	"1815.97153"	"-0.83"	"-0.00075"	"11/116"	"11"	"116"	"733938.982299805"	"HCD"	"MS2"	"8.960077"	"69.9"	"100.000"	"71.2136"	"23522"	"23522"	"23498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.3"	""	"52.4"	""	"78.3"	""	"48.0"	"2.0"	"305.8"	"125.2"	""	"1065"	"80"	"37.000"	"30.000"	"5.65352884208322E-07"	"30"	"0"	"1.225E-06"	"1.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8875"	"0.0000"	"1"	"1"	"1"	"908.48871"	"1815.97014"	"1815.97153"	"-0.76"	"-0.00069"	"11/116"	"11"	"116"	"1181504.88354492"	"HCD"	"MS2"	"0"	"107.4"	"100.000"	"70.3815"	"23182"	"23182"	"23162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.8"	""	"171.4"	""	"149.3"	""	"101.3"	"1.5"	"196.6"	"201.6"	""	"1065"	"80"	"37.000"	"30.000"	"4.84528817676675E-07"	"27"	"0"	"6.104E-07"	"1.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"908.48883"	"1815.97038"	"1815.97153"	"-0.63"	"-0.00057"	"16/116"	"16"	"116"	"372889.629699707"	"HCD"	"MS2"	"15.28134"	"38.4"	"100.000"	"71.5382"	"23655"	"23655"	"23626"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.8"	""	"67.5"	""	"53.5"	""	"31.8"	"2.1"	"90.1"	"61.8"	""	"1064"	"64"	"37.000"	"30.000"	"2.34915477991963E-05"	"29"	"0"	"2.523E-05"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"908.48889"	"1815.97051"	"1815.97153"	"-0.56"	"-0.00051"	"11/116"	"11"	"116"	"28507282.1109619"	"HCD"	"MS2"	"6.684894"	"1348.5"	"67.626"	"69.4704"	"22811"	"22811"	"22794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2529.5"	""	"2254.3"	""	"1818.4"	""	"1214.7"	"34.1"	"2483.0"	"2428.0"	""	"1064"	"86"	"37.000"	"30.000"	"1.31798853466091E-07"	"28"	"0"	"4.989E-06"	"1.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7447"	"0.0000"	"1"	"1"	"1"	"605.99506"	"1815.97062"	"1815.97153"	"-0.50"	"-0.00030"	"13/116"	"13"	"116"	"2956828.00964355"	"HCD"	"MS2"	"8.967846"	"85.1"	"100.000"	"69.1317"	"22672"	"22672"	"22650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.9"	""	"144.9"	""	"123.1"	""	"91.7"	"3.0"	"140.5"	"150.4"	""	"1062"	"47"	"37.000"	"30.000"	"0.00109419448394637"	"27"	"0"	"4.089E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"605.99512"	"1815.97080"	"1815.97153"	"-0.40"	"-0.00024"	"12/116"	"12"	"116"	"2995120.94091797"	"HCD"	"MS2"	"7.531364"	"87.3"	"100.000"	"69.2669"	"22676"	"22676"	"22650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.3"	""	"140.6"	""	"126.7"	""	"107.1"	""	"140.4"	"161.2"	""	"1062"	"37"	"37.000"	"30.000"	"0.0105219085070251"	"18"	"0"	"0.0001602"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"605.99512"	"1815.97080"	"1815.97153"	"-0.40"	"-0.00024"	"12/116"	"12"	"116"	"4943952.32977295"	"HCD"	"MS2"	"8.533533"	"124.4"	"100.000"	"70.4819"	"23172"	"23172"	"23155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.7"	""	"208.7"	""	"171.6"	""	"132.9"	""	"232.2"	"229.4"	""	"1062"	"38"	"37.000"	"30.000"	"0.00924899449770947"	"18"	"7.476E-05"	"0.0001935"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"908.48944"	"1815.97161"	"1815.97153"	"0.04"	"0.00004"	"22/116"	"22"	"116"	"7991987.92401123"	"HCD"	"MS2"	"0.3386743"	"403.3"	"62.651"	"70.0625"	"23052"	"23052"	"23034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"742.7"	""	"666.6"	""	"540.3"	""	"323.9"	"10.1"	"743.6"	"791.5"	""	"1070"	"90"	"37.000"	"30.000"	"5.70628924858189E-08"	"28"	"0"	"2.249E-06"	"1.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"908.48956"	"1815.97185"	"1815.97153"	"0.18"	"0.00016"	"11/116"	"11"	"116"	"98101382.4384766"	"HCD"	"MS2"	"0"	"570.9"	"7.248"	"69.9085"	"22938"	"22938"	"22928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1029.5"	""	"936.4"	""	"764.3"	""	"503.8"	"3.3"	"1079.5"	"1090.1"	""	"1070"	"86"	"37.000"	"30.000"	"1.34385924085763E-07"	"28"	"0"	"2.014E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8795"	"0.0000"	"1"	"1"	"1"	"908.48962"	"1815.97197"	"1815.97153"	"0.24"	"0.00022"	"11/116"	"11"	"116"	"51805719.9099121"	"HCD"	"MS2"	"4.605124"	"1191.3"	"31.077"	"69.6356"	"22827"	"22827"	"22810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2274.1"	""	"1943.1"	""	"1615.4"	""	"1096.3"	"20.5"	"2174.9"	"2148.4"	""	"1070"	"83"	"37.000"	"30.000"	"2.41186936929682E-07"	"28"	"0"	"1.412E-05"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"605.99554"	"1815.97208"	"1815.97153"	"0.30"	"0.00018"	"10/116"	"10"	"116"	"3021586.24478149"	"HCD"	"MS2"	"18.44803"	"87.1"	"100.000"	"71.3241"	"23567"	"23567"	"23546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.9"	""	"88.1"	""	"107.4"	""	"75.3"	""	"295.3"	"171.2"	""	"1070"	"35"	"37.000"	"30.000"	"0.0175530981815519"	"29"	"7.476E-05"	"0.0001887"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8795"	"0.0000"	"1"	"1"	"1"	"908.48993"	"1815.97258"	"1815.97153"	"0.58"	"0.00053"	"11/116"	"11"	"116"	"5901319.25415039"	"HCD"	"MS2"	"0"	"491.9"	"100.000"	"70.2073"	"23060"	"23060"	"23043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"901.6"	""	"839.7"	""	"647.2"	""	"422.6"	"6.1"	"913.9"	"925.7"	""	"1061"	"83"	"37.000"	"30.000"	"2.37511907865561E-07"	"28"	"0"	"2.977E-06"	"1.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"908.48999"	"1815.97270"	"1815.97153"	"0.65"	"0.00059"	"10/116"	"10"	"116"	"1065996.23077393"	"HCD"	"MS2"	"3.757068"	"97.8"	"100.000"	"70.5279"	"23190"	"23190"	"23171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.4"	""	"167.0"	""	"122.9"	""	"99.1"	""	"180.2"	"182.8"	""	"1061"	"47"	"37.000"	"30.000"	"0.00106337241051722"	"20"	"0"	"8.125E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEFLSSFEEK"	"[K].iEEFLSSFEEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"0"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"605.99597"	"1815.97336"	"1815.97805"	"-2.58"	"-0.00156"	"7/96"	"7"	"96"	"305453.546386719"	"HCD"	"MS2"	"25.26269"	"15.1"	"100.000"	"81.0286"	"27516"	"27516"	"27486"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.7"	""	"16.6"	""	"20.4"	""	"28.9"	""	"27.9"	"32.3"	""	"1057"	"15"	"37.000"	"30.000"	"1.86657305235049"	"21"	"0.0006037"	"0.005529"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"605.99597"	"1815.97336"	"1815.97153"	"1.01"	"0.00061"	"9/116"	"9"	"116"	"22706138.5339355"	"HCD"	"MS2"	"34.46556"	"510.8"	"100.000"	"69.5617"	"22796"	"22796"	"22778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"924.7"	""	"869.6"	""	"696.5"	""	"496.9"	"6.5"	"921.6"	"917.5"	""	"1057"	"58"	"37.000"	"30.000"	"9.05826437018203E-05"	"30"	"0"	"4.676E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7833"	"0.0000"	"1"	"1"	"1"	"605.99603"	"1815.97354"	"1815.97153"	"1.11"	"0.00067"	"9/116"	"9"	"116"	"33949332.9321289"	"HCD"	"MS2"	"18.7421"	"783.0"	"98.717"	"69.4380"	"22797"	"22797"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1427.0"	""	"1327.5"	""	"1074.1"	""	"733.6"	"6.0"	"1419.8"	"1421.4"	""	"1058"	"60"	"37.000"	"30.000"	"5.45074257713615E-05"	"30"	"0"	"5.478E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8415"	"0.0000"	"1"	"1"	"1"	"908.49054"	"1815.97380"	"1815.97153"	"1.25"	"0.00114"	"20/116"	"20"	"116"	"710679.807189941"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"69.2277"	"22660"	"22660"	"22634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.3"	""	"104.4"	""	"87.2"	""	"59.1"	""	"116.6"	"117.1"	""	"1054"	"82"	"37.000"	"30.000"	"3.31749758365742E-07"	""	"0"	"2.281E-06"	"1.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7818"	"0.0000"	"1"	"1"	"1"	"605.99689"	"1815.97611"	"1815.97153"	"2.52"	"0.00153"	"9/116"	"9"	"116"	"527402298.546875"	"HCD"	"MS2"	"3.186035"	"238.3"	"1.843"	"69.7226"	"22914"	"22914"	"22897"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"432.8"	""	"377.7"	""	"322.6"	""	"210.4"	"3.7"	"448.7"	"460.6"	""	"1049"	"55"	"37.000"	"30.000"	"0.000166243813436631"	"28"	"0.0001889"	"0.0004484"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7581"	"0.0000"	"1"	"1"	"1"	"605.99695"	"1815.97629"	"1815.97153"	"2.62"	"0.00159"	"9/116"	"9"	"116"	"492173814.929688"	"HCD"	"MS2"	"3.654099"	"241.9"	"2.152"	"69.8855"	"22929"	"22929"	"22912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"453.9"	""	"401.8"	""	"325.3"	""	"216.8"	""	"431.3"	"460.8"	""	"1086"	"62"	"37.000"	"30.000"	"3.16810691620644E-05"	""	"0.0001308"	"0.0002519"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"605.99707"	"1815.97666"	"1815.97153"	"2.83"	"0.00171"	"9/116"	"9"	"116"	"37330560.1945801"	"HCD"	"MS2"	"3.389728"	"180.0"	"20.522"	"70.0581"	"23051"	"23051"	"23034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.4"	""	"307.8"	""	"226.7"	""	"151.2"	"0.3"	"327.6"	"349.0"	""	"1094"	"62"	"37.000"	"30.000"	"3.20617575989174E-05"	"30"	"0"	"9.186E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAQFVDk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7833"	"0.0000"	"1"	"1"	"1"	"605.99744"	"1815.97776"	"1815.97153"	"3.43"	"0.00208"	"9/116"	"9"	"116"	"42183734.3254395"	"HCD"	"MS2"	"3.403462"	"193.6"	"18.098"	"70.1680"	"23044"	"23044"	"23027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"347.4"	""	"298.6"	""	"267.2"	""	"174.9"	"1.8"	"363.0"	"380.8"	""	"1087"	"60"	"37.000"	"30.000"	"5.06057130316766E-05"	"29"	"0"	"0.0001071"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEFLSSFEEK"	"[K].iEEFLSSFEEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"P47245"	"Nardilysin OS=Rattus norvegicus OX=10116 GN=Nrdc PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"605.99799"	"1815.97940"	"1815.97805"	"0.74"	"0.00045"	"7/96"	"7"	"96"	"293561.609985352"	"HCD"	"MS2"	"24.67684"	"15.7"	"100.000"	"81.0406"	"27470"	"27470"	"27440"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.9"	""	"19.2"	""	"21.8"	""	"22.6"	""	"31.9"	"33.7"	""	"1089"	"12"	"37.000"	"30.000"	"3.49138614450621"	"15"	"0.000494"	"0.00265"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDAWNALGSLPK"	"[K].wDAWNALGSLPk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"606.01007"	"1816.01566"	"1816.01578"	"-0.06"	"-0.00004"	"9/116"	"9"	"116"	"2899870.10931396"	"HCD"	"MS2"	"24.96734"	"73.5"	"100.000"	"75.9855"	"25466"	"25466"	"25439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.7"	""	"102.7"	""	"99.9"	""	"120.7"	""	"114.3"	"155.1"	""	"985"	"40"	"36.000"	"29.000"	"0.00501656258616653"	"27"	"0"	"1.525E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDAWNALGSLPK"	"[K].wDAWNALGSLPk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"0"	"3"	"3"	"0.6905"	"0.0000"	"1"	"1"	"1"	"606.01044"	"1816.01676"	"1816.01578"	"0.54"	"0.00033"	"9/116"	"9"	"116"	"2053165.68286133"	"HCD"	"MS2"	"28.53239"	"56.8"	"100.000"	"75.9952"	"25422"	"25422"	"25393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.2"	""	"82.3"	""	"72.0"	""	"88.6"	"2.3"	"107.5"	"115.2"	""	"1000"	"42"	"36.000"	"30.000"	"0.0030197431468819"	"28"	"0"	"2.648E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDAWNALGSLPK"	"[K].wDAWNALGSLPk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"Q5XIC0"	"Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci2 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"908.51331"	"1816.01933"	"1816.01578"	"1.96"	"0.00178"	"8/116"	"8"	"116"	"323314.817932129"	"HCD"	"MS2"	"19.27707"	"26.4"	"100.000"	"76.0299"	"25436"	"25436"	"25409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"38.7"	""	"38.1"	""	"34.5"	""	"52.2"	"56.3"	""	"979"	"29"	"36.000"	"29.000"	"0.061059423022192"	"22"	"0.0001889"	"0.0006606"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGIDINKDK"	"[R].iIGIDINkDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2;Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2; Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.05505"	"1816.15061"	"1816.15110"	"-0.27"	"-0.00016"	"12/86"	"12"	"86"	"6629365.15362549"	"HCD"	"MS2"	"5.807896"	"445.0"	"100.000"	"47.2449"	"13768"	"13768"	"13746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"981.9"	""	"789.4"	""	"775.6"	""	"555.9"	""	"528.1"	"562.4"	""	"253"	"5"	"31.000"	"24.000"	"4.22756725633035"	"13"	"0.0001889"	"0.0005981"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGIDINKDK"	"[R].iIGIDINkDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2;Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P41682; P12711"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2; Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"1"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"606.05524"	"1816.15116"	"1816.15110"	"0.03"	"0.00002"	"9/86"	"9"	"86"	"7365812.66900635"	"HCD"	"MS2"	"24.40662"	"437.4"	"100.000"	"46.9466"	"13598"	"13598"	"13576"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"993.3"	""	"735.9"	""	"752.4"	""	"564.7"	""	"498.2"	"573.6"	""	"262"	"14"	"31.000"	"24.000"	"0.55625162876967"	"21"	"7.476E-05"	"0.0001841"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFMcQGGDFTR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"908.93970"	"1816.87212"	"1816.87458"	"-1.36"	"-0.00123"	"13/120"	"13"	"120"	"1035726.55444336"	"HCD"	"MS2"	"0"	"43.3"	"100.000"	"76.4784"	"25665"	"25665"	"25647"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.8"	""	"66.7"	""	"73.9"	""	"58.0"	""	"82.2"	"79.4"	""	"559"	"60"	"34.000"	"27.000"	"2.70011220677653E-05"	"17"	"0"	"3.952E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFMcQGGDFTR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.8167"	"0.0000"	"1"	"1"	"1"	"606.29590"	"1816.87314"	"1816.87458"	"-0.79"	"-0.00048"	"14/120"	"14"	"120"	"1105777.0802002"	"HCD"	"MS2"	"23.0956"	"18.0"	"100.000"	"76.5740"	"25653"	"25653"	"25633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.9"	""	"24.2"	""	"29.5"	""	"25.6"	"1.0"	"32.7"	"33.4"	""	"558"	"60"	"34.000"	"27.000"	"3.04511853869203E-05"	"27"	"0"	"5.722E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFMcQGGDFTR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.9661"	"0.0000"	"1"	"1"	"1"	"908.94031"	"1816.87334"	"1816.87458"	"-0.69"	"-0.00062"	"13/120"	"13"	"120"	"1028113.02313232"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"76.5301"	"25635"	"25635"	"25617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.5"	""	"67.5"	""	"72.0"	""	"57.7"	""	"84.6"	"93.8"	""	"558"	"59"	"34.000"	"27.000"	"3.73769795791836E-05"	"18"	"0"	"4.206E-05"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFMcQGGDFTR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"606.29614"	"1816.87387"	"1816.87458"	"-0.39"	"-0.00024"	"11/120"	"11"	"120"	"3737092.00158691"	"HCD"	"MS2"	"27.08337"	"39.8"	"100.000"	"76.2680"	"25529"	"25529"	"25505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.8"	""	"59.3"	""	"58.1"	""	"57.9"	""	"71.5"	"72.2"	""	"566"	"37"	"34.000"	"27.000"	"0.00603651710420481"	"24"	"0"	"9.55E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFMcQGGDFTR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"606.29620"	"1816.87406"	"1816.87458"	"-0.29"	"-0.00018"	"13/120"	"13"	"120"	"3661865.23474121"	"HCD"	"MS2"	"32.05244"	"37.9"	"100.000"	"76.2073"	"25555"	"25555"	"25535"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.0"	""	"53.9"	""	"48.1"	""	"59.4"	"0.3"	"61.4"	"76.4"	""	"566"	"32"	"34.000"	"27.000"	"0.0175705936687108"	"22"	"0"	"0.0001253"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFMcQGGDFTR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"908.94067"	"1816.87407"	"1816.87458"	"-0.28"	"-0.00026"	"12/120"	"12"	"120"	"1245125.53552246"	"HCD"	"MS2"	"15.38481"	"54.4"	"100.000"	"76.2163"	"25508"	"25508"	"25489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.4"	""	"76.4"	""	"91.2"	""	"71.6"	""	"96.5"	"102.5"	""	"566"	"31"	"34.000"	"27.000"	"0.0207867424688463"	"14"	"0.0001889"	"0.0003895"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFMcQGGDFTR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"606.29639"	"1816.87461"	"1816.87458"	"0.01"	"0.00001"	"15/120"	"15"	"120"	"997776.391296387"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"76.5221"	"25683"	"25683"	"25663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.8"	""	"21.6"	""	"23.2"	""	"30.0"	""	"31.9"	"28.3"	""	"575"	"40"	"34.000"	"27.000"	"0.00292845024065558"	"22"	"0"	"0.0001138"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFMcQGGDFTR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"908.94110"	"1816.87493"	"1816.87458"	"0.19"	"0.00017"	"13/120"	"13"	"120"	"1186869.02758789"	"HCD"	"MS2"	"40.41204"	"54.0"	"100.000"	"76.1718"	"25541"	"25541"	"25519"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.0"	""	"93.1"	""	"89.0"	""	"68.8"	"0.2"	"74.8"	"102.0"	""	"579"	"45"	"34.000"	"27.000"	"0.00088643841405345"	"20"	"0"	"0.0001365"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAqFVDk.[C]"	"N-Term(TMT6plex); Q8(Deamidated); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"606.32245"	"1816.95279"	"1816.95554"	"-1.51"	"-0.00092"	"9/116"	"9"	"116"	"2777057.96911621"	"HCD"	"MS2"	"45.16361"	"62.9"	"100.000"	"71.6759"	"23659"	"23659"	"23635"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.3"	""	"90.1"	""	"95.6"	""	"66.3"	"1.2"	"124.0"	"113.7"	""	"1161"	"29"	"37.000"	"30.000"	"0.0672670255248051"	"20"	"0.0001859"	"0.0003354"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVMGDFAqFVDk.[C]"	"N-Term(TMT6plex); Q8(Deamidated); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7246"	"0.0000"	"1"	"1"	"1"	"908.98553"	"1816.96379"	"1816.95554"	"4.54"	"0.00412"	"9/116"	"9"	"116"	"669162.665344238"	"HCD"	"MS2"	"36.28669"	"72.0"	"100.000"	"71.6044"	"23630"	"23630"	"23603"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.7"	""	"118.9"	""	"104.1"	""	"68.4"	""	"149.6"	"115.9"	""	"1191"	"69"	"37.000"	"30.000"	"7.25908306159757E-06"	""	"0"	"1.391E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIIPLISQCTPK"	"[K].tIIPLISQcTPk.[V]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"909.53375"	"1818.06023"	"1818.06332"	"-1.70"	"-0.00155"	"10/114"	"10"	"114"	"171197.36315918"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"74.5706"	"24893"	"24893"	"24863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.5"	""	"17.5"	""	"28.1"	""	"21.4"	""	"25.5"	"31.7"	""	"848"	"36"	"36.000"	"29.000"	"0.0109993204953838"	"18"	"0.0001889"	"0.0004719"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIIPLISQCTPK"	"[K].tIIPLISQcTPk.[V]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.69196"	"1818.06131"	"1818.06332"	"-1.10"	"-0.00067"	"13/114"	"13"	"114"	"1696385.8737793"	"HCD"	"MS2"	"17.06421"	"46.1"	"100.000"	"74.5086"	"24867"	"24867"	"24847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.1"	""	"66.1"	""	"83.7"	""	"59.7"	""	"79.6"	"79.2"	""	"831"	"43"	"36.000"	"29.000"	"0.00213093905048412"	"15"	"0"	"6.342E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIIPLISQCTPK"	"[K].tIIPLISQcTPk.[V]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"606.69226"	"1818.06223"	"1818.06332"	"-0.60"	"-0.00036"	"14/114"	"14"	"114"	"3093327.7989502"	"HCD"	"MS2"	"29.62583"	"71.4"	"100.000"	"74.1971"	"24740"	"24740"	"24719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.0"	""	"96.2"	""	"126.5"	""	"103.5"	"0.1"	"115.3"	"124.5"	""	"818"	"54"	"36.000"	"29.000"	"0.000170892619958468"	"20"	"0"	"3.082E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIIPLISQCTPK"	"[K].tIIPLISQcTPk.[V]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"909.53510"	"1818.06291"	"1818.06332"	"-0.22"	"-0.00020"	"12/114"	"12"	"114"	"783006.278259277"	"HCD"	"MS2"	"25.42753"	"53.0"	"100.000"	"74.2431"	"24759"	"24759"	"24735"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.1"	""	"69.0"	""	"95.8"	""	"82.3"	""	"72.4"	"86.6"	""	"810"	"32"	"36.000"	"29.000"	"0.0282784123651254"	"15"	"0.0001308"	"0.0002298"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIIPLISQCTPK"	"[K].tIIPLISQcTPk.[V]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.69250"	"1818.06296"	"1818.06332"	"-0.20"	"-0.00012"	"12/114"	"12"	"114"	"2196267.23205566"	"HCD"	"MS2"	"40.66707"	"57.7"	"100.000"	"74.1511"	"24670"	"24670"	"24641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.4"	""	"94.1"	""	"88.7"	""	"87.6"	"0.2"	"94.6"	"93.7"	""	"810"	"36"	"36.000"	"29.000"	"0.0096040635079297"	"15"	"0"	"0.0001182"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIIPLISQCTPK"	"[K].tIIPLISQcTPk.[V]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9672"	"0.0000"	"1"	"1"	"1"	"606.69275"	"1818.06369"	"1818.06332"	"0.21"	"0.00012"	"14/114"	"14"	"114"	"2640702.30932617"	"HCD"	"MS2"	"7.381859"	"66.1"	"100.000"	"74.4418"	"24788"	"24788"	"24769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.6"	""	"91.8"	""	"124.1"	""	"81.7"	""	"98.0"	"120.6"	""	"811"	"61"	"36.000"	"29.000"	"3.01988815418878E-05"	"18"	"0"	"1.921E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIIPLISQCTPK"	"[K].tIIPLISQcTPk.[V]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"909.53564"	"1818.06401"	"1818.06332"	"0.38"	"0.00035"	"8/114"	"8"	"114"	"229142.467651367"	"HCD"	"MS2"	"8.738541"	"17.2"	"100.000"	"74.5387"	"24828"	"24828"	"24801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.1"	""	"22.2"	""	"30.1"	""	"27.7"	""	"33.4"	"27.1"	""	"820"	"43"	"36.000"	"29.000"	"0.0021566707922019"	"20"	"0.0001308"	"0.0002351"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIIPLISQCTPK"	"[K].tIIPLISQcTPk.[V]"	"N-Term(TMT6plex); C9(Methylthio); K12(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"909.53583"	"1818.06438"	"1818.06332"	"0.58"	"0.00053"	"9/114"	"9"	"114"	"734116.002502441"	"HCD"	"MS2"	"29.60013"	"58.3"	"100.000"	"74.2092"	"24693"	"24693"	"24673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.9"	""	"71.1"	""	"103.9"	""	"94.2"	"0.3"	"88.6"	"84.9"	""	"816"	"20"	"36.000"	"29.000"	"0.449428038292898"	"15"	"0.0004557"	"0.002596"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDWTSLLPSSIK"	"[R].lDWTSLLPSSIk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"606.69678"	"1818.07578"	"1818.07771"	"-1.06"	"-0.00064"	"11/104"	"11"	"104"	"968403.910522461"	"HCD"	"MS2"	"7.551579"	"29.8"	"100.000"	"84.5042"	"28933"	"28933"	"28913"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.2"	""	"38.0"	""	"40.9"	""	"59.4"	""	"47.7"	"57.2"	""	"756"	"32"	"35.000"	"28.000"	"0.0254971594469814"	"17"	"0.0001308"	"0.000294"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDWTSLLPSSIK"	"[R].lDWTSLLPSSIk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"606.69720"	"1818.07706"	"1818.07771"	"-0.36"	"-0.00022"	"12/104"	"12"	"104"	"921124.894348145"	"HCD"	"MS2"	"11.65584"	"30.1"	"100.000"	"84.4193"	"28847"	"28847"	"28833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.8"	""	"33.7"	""	"41.3"	""	"58.3"	""	"56.2"	"52.5"	""	"744"	"38"	"35.000"	"28.000"	"0.00540185521742639"	"24"	"0"	"0.0001477"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDWTSLLPSSIK"	"[R].lDWTSLLPSSIk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"909.54382"	"1818.08037"	"1818.07771"	"1.46"	"0.00133"	"6/104"	"6"	"104"	"170346.95703125"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"84.5131"	"28937"	"28937"	"28913"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.9"	""	"19.1"	""	"17.6"	""	"20.8"	""	"23.7"	"23.4"	""	"688"	"27"	"35.000"	"28.000"	"0.0678513421223509"	"26"	"0.0002277"	"0.001164"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKVPITYLELLN"	"[K].gkVPITYLELLN.[-]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"1"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"606.70905"	"1818.11258"	"1818.11409"	"-0.83"	"-0.00050"	"4/114"	"4"	"114"	"1641797.83990479"	"HCD"	"MS2"	"28.19251"	"41.8"	"100.000"	"72.8622"	"24195"	"24195"	"24175"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.3"	""	"53.5"	""	"53.3"	""	"68.1"	""	"88.0"	"76.8"	""	"497"	"12"	"33.000"	"26.000"	"1.54285955006171"	"15"	"0.004007"	"0.1031"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVLPISLATTFK"	"[R].aVVLPISLATTFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"606.72125"	"1818.14920"	"1818.15048"	"-0.70"	"-0.00042"	"13/104"	"13"	"104"	"2422647.93780518"	"HCD"	"MS2"	"47.64138"	"61.9"	"100.000"	"79.3354"	"26774"	"26774"	"26753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.8"	""	"92.1"	""	"89.1"	""	"87.8"	"0.3"	"112.2"	"114.9"	""	"241"	"38"	"30.000"	"23.000"	"0.00205582927874876"	"18"	"0"	"4.268E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVLPISLATTFK"	"[R].aVVLPISLATTFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"606.72162"	"1818.15030"	"1818.15048"	"-0.10"	"-0.00006"	"13/104"	"13"	"104"	"823599.380004883"	"HCD"	"MS2"	"33.08868"	"31.8"	"100.000"	"79.6538"	"26904"	"26904"	"26881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.2"	""	"43.4"	""	"47.3"	""	"50.2"	"0.9"	"62.2"	"56.0"	""	"241"	"28"	"30.000"	"23.000"	"0.0173774899858747"	"16"	"0.0001308"	"0.0002233"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVLPISLATTFK"	"[R].aVVLPISLATTFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"606.72168"	"1818.15049"	"1818.15048"	"0.00"	"0.00000"	"11/104"	"11"	"104"	"2572816.44610596"	"HCD"	"MS2"	"30.65573"	"61.9"	"100.000"	"79.3254"	"26821"	"26821"	"26799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.1"	""	"86.0"	""	"92.2"	""	"83.9"	"0.7"	"114.8"	"125.5"	""	"240"	"39"	"30.000"	"23.000"	"0.00167564203326713"	"18"	"0"	"3.861E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVLPISLATTFK"	"[R].aVVLPISLATTFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"909.57904"	"1818.15080"	"1818.15048"	"0.18"	"0.00016"	"11/104"	"11"	"104"	"369721.574707031"	"HCD"	"MS2"	"26.5464"	"23.5"	"100.000"	"79.3392"	"26827"	"26827"	"26799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.2"	""	"33.9"	""	"34.1"	""	"26.6"	""	"45.7"	"50.7"	""	"240"	"32"	"30.000"	"23.000"	"0.00800168123056346"	"14"	"0.0001889"	"0.0009603"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVLPISLATTFK"	"[R].aVVLPISLATTFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"909.57965"	"1818.15203"	"1818.15048"	"0.85"	"0.00077"	"10/104"	"10"	"104"	"364310.121826172"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"79.3816"	"26793"	"26793"	"26769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.3"	""	"32.7"	""	"30.7"	""	"30.4"	""	"41.8"	"40.2"	""	"237"	"29"	"30.000"	"23.000"	"0.0162823974038983"	"15"	"0.0001889"	"0.0009597"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPLVSLMMVEK"	"[K].vDPLVSLMMVEk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"910.02710"	"1819.04692"	"1819.04733"	"-0.23"	"-0.00021"	"16/106"	"16"	"106"	"321866.254272461"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"82.1415"	"27969"	"27969"	"27950"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.3"	""	"30.4"	""	"32.4"	""	"24.3"	""	"49.2"	"50.9"	""	"924"	"59"	"36.000"	"29.000"	"6.4363844296073E-05"	"22"	"0"	"1.412E-05"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPLVSLMMVEK"	"[K].vDPLVSLMMVEk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"910.02722"	"1819.04717"	"1819.04733"	"-0.09"	"-0.00008"	"13/106"	"13"	"106"	"276584.417236328"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"82.1211"	"27910"	"27910"	"27888"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.0"	""	"32.6"	""	"34.4"	""	"31.9"	""	"55.3"	"43.1"	""	"924"	"36"	"36.000"	"29.000"	"0.0110063159484372"	"16"	"0.0001889"	"0.0005581"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPLVSLMMVEK"	"[K].vDPLVSLMMVEk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"607.02063"	"1819.04734"	"1819.04733"	"0.00"	"0.00000"	"13/106"	"13"	"106"	"1834512.07757568"	"HCD"	"MS2"	"3.863798"	"51.9"	"100.000"	"82.1784"	"27984"	"27984"	"27966"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.5"	""	"70.6"	""	"71.6"	""	"66.1"	""	"108.6"	"108.3"	""	"923"	"41"	"36.000"	"29.000"	"0.00375986027075618"	"19"	"0"	"2.333E-05"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPLVSLMMVEK"	"[K].vDPLVSLMMVEk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"3"	"3"	"0.7719"	"0.0000"	"1"	"1"	"1"	"607.02087"	"1819.04807"	"1819.04733"	"0.40"	"0.00024"	"13/106"	"13"	"106"	"2191428.84191895"	"HCD"	"MS2"	"6.687157"	"61.3"	"100.000"	"82.1925"	"27939"	"27939"	"27920"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.0"	""	"81.6"	""	"77.9"	""	"73.6"	"0.3"	"124.6"	"120.8"	""	"941"	"57"	"36.000"	"29.000"	"9.49641374112175E-05"	"29"	"0"	"1.111E-05"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDSSTVTHLFK"	"[K].lLDSSTVTHLFk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"607.02869"	"1819.07151"	"1819.07296"	"-0.80"	"-0.00048"	"17/98"	"17"	"98"	"20712177.9034424"	"HCD"	"MS2"	"4.378257"	"275.3"	"49.621"	"60.8877"	"19316"	"19316"	"19299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"348.0"	""	"316.5"	""	"359.2"	""	"514.1"	""	"523.5"	"553.0"	""	"764"	"68"	"35.000"	"28.000"	"5.49621056893733E-06"	"24"	"0"	"1.034E-06"	"1.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDSSTVTHLFK"	"[K].lLDSSTVTHLFk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"3"	"3"	"0.9104"	"0.0000"	"1"	"1"	"1"	"607.02887"	"1819.07206"	"1819.07296"	"-0.49"	"-0.00030"	"16/98"	"16"	"98"	"17399850.84375"	"HCD"	"MS2"	"4.511182"	"404.3"	"84.527"	"60.7195"	"19194"	"19194"	"19177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"516.5"	""	"483.8"	""	"525.5"	""	"753.6"	""	"733.1"	"821.3"	""	"764"	"67"	"35.000"	"28.000"	"7.60437215493105E-06"	"22"	"0"	"3.343E-06"	"1.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHMYEGYSLSK"	"[R].fHMYEGYSLSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.31927"	"1819.94327"	"1819.94531"	"-1.12"	"-0.00068"	"14/90"	"14"	"90"	"9066123.43200684"	"HCD"	"MS2"	"6.620383"	"163.1"	"45.250"	"43.9353"	"12421"	"12421"	"12400"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.9"	""	"239.3"	""	"265.9"	""	"224.7"	"1.8"	"305.1"	"283.4"	""	"1184"	"43"	"37.000"	"30.000"	"0.00266883489088544"	"15"	"0"	"8.17E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHMYEGYSLSK"	"[R].fHMYEGYSLSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"910.47571"	"1819.94414"	"1819.94531"	"-0.64"	"-0.00059"	"10/90"	"10"	"90"	"161682.912719727"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"43.8803"	"12399"	"12399"	"12375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.6"	""	"20.1"	""	"32.6"	""	"18.8"	""	"26.4"	"25.8"	""	"1207"	"24"	"37.000"	"30.000"	"0.241366656480822"	"14"	"0.0001889"	"0.001015"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHMYEGYSLSK"	"[R].fHMYEGYSLSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.31970"	"1819.94455"	"1819.94531"	"-0.42"	"-0.00025"	"13/90"	"13"	"90"	"11043710.7527466"	"HCD"	"MS2"	"9.310744"	"333.2"	"95.183"	"43.3232"	"12123"	"12123"	"12101"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"448.2"	""	"555.6"	""	"584.6"	""	"409.6"	""	"620.3"	"536.2"	""	"1203"	"41"	"37.000"	"30.000"	"0.00483320962494648"	"15"	"0"	"0.0001101"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHMYEGYSLSK"	"[R].fHMYEGYSLSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.31976"	"1819.94474"	"1819.94531"	"-0.32"	"-0.00019"	"12/90"	"12"	"90"	"11558570.513855"	"HCD"	"MS2"	"0"	"396.5"	"100.000"	"43.6215"	"12293"	"12293"	"12273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"511.3"	""	"651.6"	""	"652.6"	""	"504.4"	"5.6"	"757.7"	"672.4"	""	"1205"	"34"	"37.000"	"30.000"	"0.0262395903895555"	"15"	"0"	"0.0001473"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIAAGHPSMNLLLR"	"[K].tPIAAGHPSMNLLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"607.35138"	"1820.03958"	"1820.04139"	"-0.99"	"-0.00060"	"10/136"	"10"	"136"	"4790605.03491211"	"HCD"	"MS2"	"31.5081"	"126.0"	"100.000"	"44.5180"	"12609"	"12609"	"12590"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.8"	""	"165.9"	""	"170.0"	""	"195.2"	""	"249.4"	"221.1"	""	"1024"	"31"	"37.000"	"30.000"	"0.0425863050804567"	"15"	"0"	"1.106E-05"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIAAGHPSMNLLLR"	"[K].tPIAAGHPSMNLLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.35181"	"1820.04087"	"1820.04139"	"-0.29"	"-0.00017"	"11/136"	"11"	"136"	"2848776.83410645"	"HCD"	"MS2"	"8.391888"	"120.7"	"100.000"	"45.1517"	"12917"	"12917"	"12891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.1"	""	"152.7"	""	"158.1"	""	"199.9"	""	"237.4"	"232.5"	""	"1003"	"36"	"37.000"	"30.000"	"0.0113833722321974"	"15"	"0"	"2.194E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIAAGHPSMNLLLR"	"[K].tPIAAGHPSMNLLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.35223"	"1820.04215"	"1820.04139"	"0.42"	"0.00025"	"13/136"	"13"	"136"	"5807055.89282227"	"HCD"	"MS2"	"14.25572"	"126.7"	"100.000"	"44.8115"	"12778"	"12778"	"12759"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.7"	""	"168.7"	""	"194.0"	""	"162.6"	""	"242.3"	"241.0"	""	"972"	"77"	"36.000"	"29.000"	"9.28188683663193E-07"	"17"	"0"	"1.305E-06"	"1.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIAAGHPSMNLLLR"	"[K].tPIAAGHPSMNLLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.35248"	"1820.04288"	"1820.04139"	"0.82"	"0.00050"	"12/136"	"12"	"136"	"3770466.105896"	"HCD"	"MS2"	"6.878065"	"126.0"	"100.000"	"44.8461"	"12743"	"12743"	"12720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.1"	""	"157.6"	""	"179.4"	""	"200.8"	""	"250.4"	"242.2"	""	"964"	"41"	"36.000"	"29.000"	"0.00426625723938463"	"15"	"0"	"6.781E-06"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFPLEPWQIGK"	"[R].fFPLEPWQIGk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P80254"	"D-dopachrome decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddt PE=1 SV=3"	"P80254"	"D-dopachrome decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddt PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"910.53015"	"1820.05303"	"1820.05110"	"1.06"	"0.00096"	"6/86"	"6"	"86"	"152571.811340332"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"81.8071"	"27782"	"27782"	"27760"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"6.4"	""	"9.2"	""	"38.3"	""	"28.3"	"28.0"	""	"849"	"12"	"36.000"	"29.000"	"2.7031969862541"	"14"	"0.00162"	"0.02195"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFPLEPWQIGK"	"[R].fFPLEPWQIGk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P80254"	"D-dopachrome decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddt PE=1 SV=3"	"P80254"	"D-dopachrome decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddt PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"910.53015"	"1820.05303"	"1820.05110"	"1.06"	"0.00096"	"10/86"	"10"	"86"	"152693.281188965"	"HCD"	"MS2"	"33.29494"	"9.2"	"100.000"	"81.7765"	"27821"	"27821"	"27790"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.8"	""	"5.7"	""	"7.7"	""	"29.6"	""	"17.5"	"23.6"	""	"849"	"20"	"36.000"	"29.000"	"0.471930118231035"	"14"	"0.0006037"	"0.004157"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENLLLLDLQHNR"	"[K].lENLLLLDLQHNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"607.35651"	"1820.05497"	"1820.05915"	"-2.30"	"-0.00139"	"15/128"	"15"	"128"	"4254966.48846436"	"HCD"	"MS2"	"13.75049"	"32.3"	"100.000"	"66.0876"	"21439"	"21439"	"21411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.8"	""	"33.7"	""	"33.9"	""	"61.3"	""	"71.1"	"73.4"	""	"841"	"50"	"36.000"	"29.000"	"0.000416644832827409"	"28"	"0"	"1.709E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFQILLDALDK"	"[K].gEFQILLDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"607.35657"	"1820.05515"	"1820.05697"	"-1.00"	"-0.00061"	"11/122"	"11"	"122"	"211495.438781738"	"HCD"	"MS2"	"19.81547"	"7.2"	"100.000"	"90.0804"	"31101"	"31101"	"31090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.8"	""	"7.4"	""	"4.6"	""	"8.3"	""	"11.6"	"26.3"	""	"840"	"46"	"36.000"	"29.000"	"0.00118099834876755"	"28"	"7.476E-05"	"0.0001907"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFQILLDALDK"	"[K].gEFQILLDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"607.35663"	"1820.05533"	"1820.05697"	"-0.90"	"-0.00055"	"6/122"	"6"	"122"	"234957.684875488"	"HCD"	"MS2"	"19.23212"	"7.7"	"100.000"	"89.9115"	"31004"	"31004"	"30983"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.6"	""	"3.7"	""	"8.6"	""	"8.9"	""	"6.0"	"32.7"	""	"832"	"15"	"36.000"	"29.000"	"1.36802278444409"	"14"	"0.0001889"	"0.0008725"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENLLLLDLQHNR"	"[K].lENLLLLDLQHNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"607.35712"	"1820.05680"	"1820.05915"	"-1.29"	"-0.00078"	"17/128"	"17"	"128"	"3410215.63751221"	"HCD"	"MS2"	"2.973151"	"30.4"	"100.000"	"66.3807"	"21558"	"21558"	"21539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.7"	""	"27.6"	""	"31.2"	""	"64.7"	"0.2"	"68.0"	"68.0"	""	"838"	"90"	"36.000"	"29.000"	"4.19965894754641E-08"	""	"0"	"2.797E-06"	"1.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENLLLLDLQHNR"	"[K].lENLLLLDLQHNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.7400"	"0.0000"	"1"	"1"	"1"	"607.35754"	"1820.05808"	"1820.05915"	"-0.59"	"-0.00036"	"15/128"	"15"	"128"	"3016185.14691162"	"HCD"	"MS2"	"7.957434"	"31.6"	"100.000"	"66.1530"	"21413"	"21413"	"21385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.0"	""	"33.0"	""	"31.8"	""	"58.7"	""	"76.3"	"67.1"	""	"834"	"50"	"36.000"	"29.000"	"0.000424752608818566"	"28"	"0"	"2.076E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENLLLLDLQHNR"	"[K].lENLLLLDLQHNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.7816"	"0.0000"	"1"	"1"	"1"	"607.35767"	"1820.05844"	"1820.05915"	"-0.39"	"-0.00023"	"18/128"	"18"	"128"	"4556931.34350586"	"HCD"	"MS2"	"2.550985"	"34.4"	"100.000"	"66.4394"	"21530"	"21530"	"21513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.7"	""	"33.5"	""	"35.6"	""	"71.5"	"0.3"	"82.1"	"71.0"	""	"837"	"87"	"36.000"	"29.000"	"7.81079900614308E-08"	""	"0"	"1.058E-06"	"1.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPMGMTAENLAAK"	"[K].lPmGMTAENLAAk.[Y]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"3"	"3"	"0.3438"	"0.0000"	"1"	"1"	"1"	"607.67139"	"1820.99961"	"1821.00145"	"-1.01"	"-0.00061"	"13/108"	"13"	"108"	"1847306.58856201"	"HCD"	"MS2"	"17.83208"	"96.5"	"100.000"	"47.5935"	"13863"	"13863"	"13832"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.8"	""	"132.3"	""	"141.0"	""	"134.8"	"1.4"	"194.6"	"180.7"	""	"1138"	"32"	"37.000"	"30.000"	"0.0402821151314575"	"22"	"0"	"0.0001332"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSFGPQEDLLFLR"	"[R].iGSFGPQEDLLFLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"911.00604"	"1821.00481"	"1821.01080"	"-3.29"	"-0.00300"	"17/130"	"17"	"130"	"566775.866455078"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"77.9722"	"26218"	"26218"	"26199"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.2"	""	"57.4"	""	"54.4"	""	"55.5"	""	"64.2"	"74.3"	""	"1118"	"48"	"37.000"	"30.000"	"0.000806142481502402"	"16"	"0"	"1.934E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGSFGPQEDLLFLR"	"[R].iGSFGPQEDLLFLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"911.00653"	"1821.00578"	"1821.01080"	"-2.75"	"-0.00251"	"12/130"	"12"	"130"	"559675.223571777"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"77.9159"	"26246"	"26246"	"26229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.1"	""	"53.6"	""	"59.6"	"1.9"	"53.2"	""	"65.1"	"77.7"	""	"1108"	"52"	"37.000"	"30.000"	"0.000321003497820493"	"16"	"0"	"3.043E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQTELGNLLISK"	"[K].fQTELGNLLISk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"3"	"3"	"0.0909"	"0.0000"	"1"	"1"	"1"	"607.70056"	"1821.08713"	"1821.08861"	"-0.81"	"-0.00049"	"9/124"	"9"	"124"	"2238502.44683838"	"HCD"	"MS2"	"19.82158"	"54.5"	"100.000"	"73.5817"	"24437"	"24437"	"24417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.2"	""	"84.2"	""	"89.6"	""	"77.7"	""	"104.7"	"94.9"	""	"593"	"22"	"34.000"	"27.000"	"0.203247259143214"	""	"0"	"0.0001433"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQTELGNLLISK"	"[K].fQTELGNLLISk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"911.04810"	"1821.08891"	"1821.08861"	"0.17"	"0.00015"	"11/124"	"11"	"124"	"844064.670654297"	"HCD"	"MS2"	"0"	"74.1"	"100.000"	"73.3763"	"24405"	"24405"	"24383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.1"	""	"103.3"	""	"97.1"	""	"111.8"	"1.6"	"141.3"	"136.6"	""	"585"	"88"	"34.000"	"27.000"	"4.17951482864497E-08"	""	"0"	"3.279E-07"	"1.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQTELGNLLISK"	"[K].fQTELGNLLISk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.6234"	"0.0000"	"1"	"1"	"1"	"911.04852"	"1821.08977"	"1821.08861"	"0.64"	"0.00058"	"20/124"	"20"	"124"	"536012.630126953"	"HCD"	"MS2"	"0"	"46.5"	"100.000"	"73.5004"	"24404"	"24404"	"24385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.9"	""	"64.0"	""	"74.4"	""	"71.8"	"0.5"	"87.3"	"78.9"	""	"580"	"77"	"34.000"	"27.000"	"6.15740893980063E-07"	""	"0"	"1.157E-06"	"1.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIPPKGETK"	"[K].tYIPPkGETk.[K]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.70752"	"1821.10801"	"1821.10890"	"-0.49"	"-0.00030"	"10/96"	"10"	"96"	"5663376.85888672"	"HCD"	"MS2"	"6.806576"	"360.1"	"100.000"	"32.3682"	"7658"	"7658"	"7640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"738.2"	""	"657.9"	""	"644.1"	""	"472.9"	"1.3"	"437.4"	"437.6"	""	"422"	"14"	"33.000"	"26.000"	"0.793016923048617"	"13"	"0.0002277"	"0.001199"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIPPKGETK"	"[K].tYIPPkGETk.[K]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.70770"	"1821.10855"	"1821.10890"	"-0.19"	"-0.00011"	"8/96"	"8"	"96"	"5780690.00134277"	"HCD"	"MS2"	"7.890113"	"362.1"	"100.000"	"32.5002"	"7755"	"7755"	"7734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"740.0"	""	"635.8"	""	"630.1"	""	"486.5"	"1.8"	"463.0"	"452.0"	""	"422"	"15"	"33.000"	"26.000"	"0.721576623703926"	"13"	"0.0002277"	"0.001118"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIPPKGETK"	"[K].tYIPPkGETk.[K]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.70776"	"1821.10874"	"1821.10890"	"-0.09"	"-0.00005"	"8/96"	"8"	"96"	"5567955.52667236"	"HCD"	"MS2"	"23.72174"	"338.4"	"100.000"	"32.0554"	"7531"	"7531"	"7506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"721.3"	""	"619.2"	""	"592.4"	""	"463.7"	""	"384.3"	"402.1"	""	"420"	"15"	"33.000"	"26.000"	"0.690588424839564"	"13"	"0.0003839"	"0.001802"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIPPKGETK"	"[K].tYIPPkGETk.[K]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.70801"	"1821.10947"	"1821.10890"	"0.31"	"0.00019"	"8/96"	"8"	"96"	"6776778.953125"	"HCD"	"MS2"	"8.37215"	"396.3"	"100.000"	"32.1969"	"7631"	"7631"	"7610"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"855.6"	""	"708.7"	""	"726.8"	""	"531.4"	""	"432.6"	"473.6"	""	"416"	"14"	"33.000"	"26.000"	"0.79627546609899"	"13"	"0.0001889"	"0.0005193"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGQFTLIGIPPAPR"	"[K].lLGQFTLIGIPPAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.03290"	"1822.08414"	"1822.11521"	"-17.05"	"-0.01036"	"17/134"	"17"	"134"	"2198916.30548096"	"HCD"	"MS2"	"53.59476"	"88.1"	"100.000"	"82.4350"	"28038"	"28038"	"28016"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.9"	""	"113.2"	""	"111.6"	""	"140.0"	"1.3"	"167.6"	"189.2"	""	"595"	"22"	"34.000"	"27.000"	"0.194754261785015"	"14"	"0"	"4.791E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGQFTLIGIPPAPR"	"[K].lLGQFTLIGIPPAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"911.56158"	"1822.11589"	"1822.11521"	"0.38"	"0.00034"	"5/134"	"5"	"134"	"104506.921569824"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"82.5151"	"28122"	"28122"	"28094"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"9.9"	""	"16.4"	""	"12.9"	""	"11.9"	"12.1"	""	"408"	"26"	"33.000"	"26.000"	"0.055799482016657"	"14"	"0.002132"	"0.03207"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGQFTLIGIPPAPR"	"[K].lLGQFTLIGIPPAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"911.56311"	"1822.11894"	"1822.11521"	"2.05"	"0.00187"	"8/134"	"8"	"134"	"113823.770996094"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"82.5272"	"28076"	"28076"	"28048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.8"	""	"12.9"	""	"15.0"	""	"14.0"	""	"13.4"	"17.5"	""	"392"	"22"	"32.000"	"25.000"	"0.122816317475778"	"14"	"0.003788"	"0.08821"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTMEEILEGLk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.7381"	"0.0000"	"1"	"1"	"1"	"608.33258"	"1822.98319"	"1822.98724"	"-2.22"	"-0.00135"	"13/104"	"13"	"104"	"1793115.83581543"	"HCD"	"MS2"	"12.34317"	"52.6"	"100.000"	"76.4532"	"25655"	"25655"	"25631"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.1"	""	"57.3"	""	"65.7"	""	"74.4"	""	"120.5"	"102.2"	""	"1089"	"42"	"37.000"	"30.000"	"0.00328850028695439"	"27"	"0"	"4.738E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTMEEILEGLk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.7321"	"0.0000"	"1"	"1"	"1"	"608.33282"	"1822.98392"	"1822.98724"	"-1.82"	"-0.00111"	"13/104"	"13"	"104"	"1821753.48803711"	"HCD"	"MS2"	"50.06203"	"55.7"	"100.000"	"76.5026"	"25624"	"25624"	"25601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.3"	""	"76.7"	""	"63.6"	""	"77.2"	""	"111.9"	"107.8"	""	"1096"	"56"	"37.000"	"30.000"	"0.000123532308825953"	""	"0"	"3.905E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTMEEILEGLk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"911.99756"	"1822.98784"	"1822.98724"	"0.33"	"0.00030"	"11/104"	"11"	"104"	"210974.741699219"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"76.7342"	"25715"	"25715"	"25699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.4"	""	"17.5"	""	"19.1"	""	"24.5"	""	"38.8"	"36.6"	""	"1075"	"36"	"37.000"	"30.000"	"0.0138158773323827"	"20"	"0.0001889"	"0.000832"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLANWMIPGK"	"[K].yGDLANWMIPGk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"911.99811"	"1822.98894"	"1822.99260"	"-2.01"	"-0.00183"	"8/100"	"8"	"100"	"900034.143188477"	"HCD"	"MS2"	"16.49275"	"70.8"	"100.000"	"71.1599"	"23448"	"23448"	"23427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.3"	""	"108.8"	""	"121.9"	""	"80.7"	""	"117.6"	"140.4"	""	"1080"	"26"	"37.000"	"30.000"	"0.128349375477743"	"16"	"0.0001889"	"0.0005118"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLANWMIPGK"	"[K].yGDLANWMIPGk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"608.33459"	"1822.98923"	"1822.99260"	"-1.85"	"-0.00112"	"8/100"	"8"	"100"	"6113292.36065674"	"HCD"	"MS2"	"39.0999"	"154.7"	"100.000"	"71.1213"	"23484"	"23484"	"23466"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"260.8"	""	"255.3"	""	"263.0"	""	"166.8"	""	"241.3"	"274.6"	""	"1082"	"44"	"37.000"	"30.000"	"0.00195073045874708"	"23"	"0"	"0.0001585"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLANWMIPGK"	"[K].yGDLANWMIPGk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"608.33490"	"1822.99015"	"1822.99260"	"-1.34"	"-0.00082"	"10/100"	"10"	"100"	"5007571.11749268"	"HCD"	"MS2"	"37.78542"	"136.1"	"100.000"	"71.1579"	"23447"	"23447"	"23427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.2"	""	"203.4"	""	"216.1"	""	"184.2"	""	"241.2"	"253.2"	""	"1077"	"36"	"37.000"	"30.000"	"0.0138097465366479"	"23"	"0.0003146"	"0.001399"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLANWMIPGK"	"[K].yGDLANWMIPGk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"911.99939"	"1822.99150"	"1822.99260"	"-0.60"	"-0.00055"	"14/100"	"14"	"100"	"1027943.58703613"	"HCD"	"MS2"	"8.274411"	"80.2"	"100.000"	"71.0821"	"23468"	"23468"	"23450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.1"	""	"114.3"	""	"128.1"	""	"95.9"	""	"148.7"	"149.6"	""	"1074"	"48"	"37.000"	"30.000"	"0.000911956841371956"	"23"	"0"	"0.000142"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLATMESMNAGK"	"[R].vLLATMESMNAGk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"608.34265"	"1823.01340"	"1823.01710"	"-2.03"	"-0.00123"	"12/108"	"12"	"108"	"1753612.60577393"	"HCD"	"MS2"	"62.83655"	"68.1"	"100.000"	"64.5858"	"20773"	"20773"	"20745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.6"	""	"89.6"	""	"89.2"	""	"117.3"	""	"136.9"	"125.7"	""	"1060"	"33"	"37.000"	"30.000"	"0.0245626867460232"	"15"	"0"	"0.0001173"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDNFVALATGEK"	"[K].tVDNFVALATGEk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.9136"	"0.0000"	"1"	"1"	"1"	"912.01843"	"1823.02959"	"1823.03149"	"-1.04"	"-0.00095"	"19/136"	"19"	"136"	"856882.456970215"	"HCD"	"MS2"	"0"	"69.8"	"100.000"	"63.6235"	"20433"	"20433"	"20403"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.3"	""	"63.5"	""	"75.5"	""	"149.3"	""	"149.8"	"139.2"	""	"1001"	"81"	"36.000"	"30.000"	"4.25994588120289E-07"	"25"	"0"	"2.765E-06"	"1.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDNFVALATGEK"	"[K].tVDNFVALATGEk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"608.34857"	"1823.03116"	"1823.03149"	"-0.18"	"-0.00011"	"15/136"	"15"	"136"	"4272978.68963623"	"HCD"	"MS2"	"41.16077"	"127.1"	"100.000"	"63.4937"	"20327"	"20327"	"20297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.2"	""	"141.1"	""	"170.6"	""	"241.6"	"0.1"	"249.9"	"253.9"	""	"994"	"40"	"36.000"	"29.000"	"0.00557643171788076"	"25"	"0"	"8.415E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDNFVALATGEK"	"[K].tVDNFVALATGEk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"608.34882"	"1823.03189"	"1823.03149"	"0.22"	"0.00014"	"13/136"	"13"	"136"	"4977660.96655273"	"HCD"	"MS2"	"23.59537"	"138.2"	"100.000"	"63.5683"	"20410"	"20410"	"20387"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.0"	""	"145.9"	""	"157.0"	""	"283.0"	""	"289.7"	"282.4"	""	"1016"	"35"	"37.000"	"30.000"	"0.0165906618743547"	"24"	"0"	"4.405E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDNFVALATGEK"	"[K].tVDNFVALATGEk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8916"	"0.0000"	"1"	"1"	"1"	"912.02106"	"1823.03484"	"1823.03149"	"1.84"	"0.00168"	"19/136"	"19"	"136"	"862034.840087891"	"HCD"	"MS2"	"0"	"73.1"	"100.000"	"63.5630"	"20355"	"20355"	"20329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.0"	""	"68.3"	""	"82.6"	""	"155.7"	"0.5"	"142.2"	"154.0"	""	"994"	"83"	"36.000"	"29.000"	"2.58438010277157E-07"	"27"	"0"	"2.877E-06"	"1.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNAFGNAFLNR"	"[R].kLNAFGNAFLNR.[F]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.36139"	"1823.06961"	"1823.06921"	"0.22"	"0.00014"	"11/112"	"11"	"112"	"14428150.7359619"	"HCD"	"MS2"	"4.657835"	"584.3"	"100.000"	"46.9689"	"13655"	"13655"	"13634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"987.9"	""	"873.7"	""	"1012.6"	""	"867.5"	""	"865.4"	"912.8"	""	"758"	"28"	"35.000"	"28.000"	"0.0664720710198028"	"14"	"0"	"1.493E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNAFGNAFLNR"	"[R].kLNAFGNAFLNR.[F]"	"N-Term(TMT6plex); K1(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.36188"	"1823.07108"	"1823.06921"	"1.03"	"0.00062"	"11/112"	"11"	"112"	"12452050.7613525"	"HCD"	"MS2"	"20.03282"	"532.5"	"100.000"	"46.6818"	"13490"	"13490"	"13464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"919.5"	""	"771.0"	""	"916.3"	""	"799.8"	""	"788.8"	"832.3"	""	"740"	"30"	"35.000"	"28.000"	"0.0405696932572978"	"14"	"0"	"1.438E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMAFLHTLEPLIPR"	"[R].gMAFLHTLEPLIPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"608.68280"	"1824.03385"	"1824.04033"	"-3.55"	"-0.00216"	"8/108"	"8"	"108"	"9040128.95715332"	"HCD"	"MS2"	"0"	"67.5"	"100.000"	"69.8692"	"22973"	"22973"	"22959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.4"	""	"118.6"	""	"115.5"	""	"84.2"	""	"119.2"	"116.0"	""	"952"	"33"	"36.000"	"29.000"	"0.0223669595696082"	"17"	"0"	"2.711E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFNMPLTISSLK"	"[K].dFNMPLTISSLk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"608.68286"	"1824.03403"	"1824.03413"	"-0.05"	"-0.00003"	"13/124"	"13"	"124"	"2420544.82989502"	"HCD"	"MS2"	"24.81395"	"70.1"	"100.000"	"70.7702"	"23289"	"23289"	"23267"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.2"	""	"76.8"	""	"81.9"	""	"91.3"	""	"154.1"	"186.6"	""	"955"	"44"	"36.000"	"29.000"	"0.00179049608572218"	"21"	"0"	"6.033E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMAFLHTLEPLIPR"	"[R].gMAFLHTLEPLIPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.7556"	"0.0000"	"1"	"1"	"1"	"608.68359"	"1824.03623"	"1824.04033"	"-2.25"	"-0.00137"	"8/108"	"8"	"108"	"5308886.21655273"	"HCD"	"MS2"	"22.63565"	"70.7"	"100.000"	"69.6813"	"22845"	"22845"	"22826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.7"	""	"102.3"	""	"95.7"	""	"105.0"	""	"185.1"	"111.8"	""	"935"	"45"	"36.000"	"29.000"	"0.00148518862802877"	"27"	"0"	"9.917E-06"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMAFLHTLEPLIPR"	"[R].gMAFLHTLEPLIPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"608.68359"	"1824.03623"	"1824.04033"	"-2.25"	"-0.00137"	"10/108"	"10"	"108"	"10995390.6931763"	"HCD"	"MS2"	"3.23494"	"83.3"	"100.000"	"69.9839"	"22968"	"22968"	"22953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.3"	""	"134.9"	""	"148.1"	""	"95.6"	"0.1"	"140.1"	"158.2"	""	"935"	"57"	"36.000"	"29.000"	"0.00010157378011188"	"22"	"0"	"1.901E-06"	"1.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMAFLHTLEPLIPR"	"[R].gMAFLHTLEPLIPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"608.68451"	"1824.03897"	"1824.04033"	"-0.74"	"-0.00045"	"7/108"	"7"	"108"	"1355024.90740967"	"HCD"	"MS2"	"2.004773"	"22.5"	"100.000"	"70.1896"	"23104"	"23104"	"23082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.3"	""	"26.7"	""	"34.7"	""	"30.7"	""	"39.7"	"47.8"	""	"897"	"22"	"36.000"	"29.000"	"0.310286190457143"	"19"	"0.0001859"	"0.000366"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMAFLHTLEPLIPR"	"[R].gMAFLHTLEPLIPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"608.68475"	"1824.03971"	"1824.04033"	"-0.34"	"-0.00021"	"6/108"	"6"	"108"	"1528095.05340576"	"HCD"	"MS2"	"1.445855"	"26.1"	"100.000"	"70.2973"	"23096"	"23096"	"23075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.1"	""	"37.8"	""	"36.6"	""	"43.0"	"0.6"	"44.3"	"48.4"	""	"891"	"20"	"36.000"	"29.000"	"0.498709577084616"	"19"	"0"	"0.0001807"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"912.53027"	"1824.05327"	"1824.05526"	"-1.09"	"-0.00099"	"12/118"	"12"	"118"	"1721508.90405273"	"HCD"	"MS2"	"0"	"113.3"	"100.000"	"52.4184"	"15877"	"15877"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.1"	""	"114.5"	""	"138.4"	""	"296.2"	""	"194.6"	"206.1"	""	"845"	"59"	"36.000"	"29.000"	"5.73887431183072E-05"	"23"	"0"	"9.916E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"912.53027"	"1824.05327"	"1824.05526"	"-1.09"	"-0.00099"	"12/118"	"12"	"118"	"1721508.90405273"	"HCD"	"MS2"	"0"	"113.3"	"100.000"	"52.4184"	"15877"	"15877"	"15846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.1"	""	"114.5"	""	"138.4"	""	"296.2"	""	"194.6"	"206.1"	""	"845"	"59"	"36.000"	"29.000"	"5.73887431183072E-05"	"23"	"0"	"9.916E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"608.68970"	"1824.05454"	"1824.05526"	"-0.39"	"-0.00024"	"10/118"	"10"	"118"	"10665446.8077393"	"HCD"	"MS2"	"17.88408"	"202.9"	"86.759"	"52.2295"	"15749"	"15749"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"256.7"	""	"216.5"	""	"263.5"	""	"478.5"	""	"364.1"	"344.6"	""	"829"	"71"	"36.000"	"29.000"	"3.5935569750178E-06"	"27"	"0"	"9.382E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"608.68970"	"1824.05454"	"1824.05526"	"-0.39"	"-0.00024"	"10/118"	"10"	"118"	"10665446.8077393"	"HCD"	"MS2"	"17.88408"	"202.9"	"86.759"	"52.2295"	"15749"	"15749"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"256.7"	""	"216.5"	""	"263.5"	""	"478.5"	""	"364.1"	"344.6"	""	"829"	"71"	"36.000"	"29.000"	"3.5935569750178E-06"	"27"	"0"	"9.382E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"912.53094"	"1824.05461"	"1824.05526"	"-0.35"	"-0.00032"	"12/118"	"12"	"118"	"742606.272705078"	"HCD"	"MS2"	"0"	"51.9"	"100.000"	"51.1914"	"15375"	"15375"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.1"	""	"58.2"	""	"53.1"	""	"131.9"	"0.9"	"87.1"	"102.8"	""	"829"	"76"	"36.000"	"29.000"	"1.03878228538181E-06"	"25"	"0"	"3.364E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"912.53094"	"1824.05461"	"1824.05526"	"-0.35"	"-0.00032"	"12/118"	"12"	"118"	"742606.272705078"	"HCD"	"MS2"	"0"	"51.9"	"100.000"	"51.1914"	"15375"	"15375"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.1"	""	"58.2"	""	"53.1"	""	"131.9"	"0.9"	"87.1"	"102.8"	""	"829"	"76"	"36.000"	"29.000"	"1.03878228538181E-06"	"25"	"0"	"3.364E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"912.53101"	"1824.05474"	"1824.05526"	"-0.29"	"-0.00026"	"19/118"	"19"	"118"	"1811190.6784668"	"HCD"	"MS2"	"0"	"112.5"	"100.000"	"52.2503"	"15758"	"15758"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.7"	""	"123.0"	""	"144.4"	""	"299.6"	""	"188.8"	"187.2"	""	"829"	"81"	"36.000"	"29.000"	"3.3537025020944E-07"	"21"	"0"	"5.467E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"912.53101"	"1824.05474"	"1824.05526"	"-0.29"	"-0.00026"	"19/118"	"19"	"118"	"1811190.6784668"	"HCD"	"MS2"	"0"	"112.5"	"100.000"	"52.2503"	"15758"	"15758"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.7"	""	"123.0"	""	"144.4"	""	"299.6"	""	"188.8"	"187.2"	""	"829"	"81"	"36.000"	"29.000"	"3.3537025020944E-07"	"21"	"0"	"5.467E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"912.53119"	"1824.05510"	"1824.05526"	"-0.09"	"-0.00008"	"18/118"	"18"	"118"	"749537.411865234"	"HCD"	"MS2"	"0"	"55.3"	"100.000"	"51.0831"	"15281"	"15281"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.6"	""	"68.9"	""	"70.8"	""	"129.5"	"0.4"	"106.0"	"88.4"	""	"824"	"59"	"36.000"	"29.000"	"5.06870733574701E-05"	"20"	"0"	"0.0001621"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"912.53119"	"1824.05510"	"1824.05526"	"-0.09"	"-0.00008"	"18/118"	"18"	"118"	"749537.411865234"	"HCD"	"MS2"	"0"	"55.3"	"100.000"	"51.0831"	"15281"	"15281"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.6"	""	"68.9"	""	"70.8"	""	"129.5"	"0.4"	"106.0"	"88.4"	""	"824"	"59"	"36.000"	"29.000"	"5.06870733574701E-05"	"20"	"0"	"0.0001621"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"608.68994"	"1824.05527"	"1824.05526"	"0.01"	"0.00000"	"14/118"	"14"	"118"	"7389749.13928223"	"HCD"	"MS2"	"59.80705"	"213.7"	"100.000"	"51.1891"	"15374"	"15374"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.2"	""	"273.4"	""	"308.9"	""	"417.3"	"1.1"	"387.3"	"365.5"	""	"824"	"60"	"36.000"	"29.000"	"3.80099427987762E-05"	"25"	"0"	"1.98E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"608.68994"	"1824.05527"	"1824.05526"	"0.01"	"0.00000"	"14/118"	"14"	"118"	"7389749.13928223"	"HCD"	"MS2"	"59.80705"	"213.7"	"100.000"	"51.1891"	"15374"	"15374"	"15350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.2"	""	"273.4"	""	"308.9"	""	"417.3"	"1.1"	"387.3"	"365.5"	""	"824"	"60"	"36.000"	"29.000"	"3.80099427987762E-05"	"25"	"0"	"1.98E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"608.69006"	"1824.05564"	"1824.05526"	"0.21"	"0.00013"	"10/118"	"10"	"118"	"11723519.1508789"	"HCD"	"MS2"	"23.17379"	"243.6"	"100.000"	"52.4370"	"15884"	"15884"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"291.5"	""	"284.1"	""	"306.4"	""	"577.0"	""	"428.6"	"421.1"	""	"809"	"74"	"36.000"	"29.000"	"1.49251438621626E-06"	""	"0"	"1.179E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"608.69006"	"1824.05564"	"1824.05526"	"0.21"	"0.00013"	"10/118"	"10"	"118"	"11723519.1508789"	"HCD"	"MS2"	"23.17379"	"243.6"	"100.000"	"52.4370"	"15884"	"15884"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"291.5"	""	"284.1"	""	"306.4"	""	"577.0"	""	"428.6"	"421.1"	""	"809"	"74"	"36.000"	"29.000"	"1.49251438621626E-06"	""	"0"	"1.179E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTIVDTGIGMTK"	"[R].tLTIVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"608.69006"	"1824.05564"	"1824.05526"	"0.21"	"0.00013"	"13/118"	"13"	"118"	"7682121.79663086"	"HCD"	"MS2"	"46.76461"	"227.0"	"100.000"	"51.0325"	"15260"	"15260"	"15234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.4"	""	"319.7"	""	"316.9"	""	"444.1"	""	"399.1"	"403.6"	""	"809"	"55"	"36.000"	"29.000"	"0.000128209003880109"	"24"	"0"	"1.014E-05"	"1.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTLVDTGIGMTK"	"[R].tLTLVDTGIGmTk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"608.69006"	"1824.05564"	"1824.05526"	"0.21"	"0.00013"	"13/118"	"13"	"118"	"7682121.79663086"	"HCD"	"MS2"	"46.76461"	"227.0"	"100.000"	"51.0325"	"15260"	"15260"	"15234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.4"	""	"319.7"	""	"316.9"	""	"444.1"	""	"399.1"	"403.6"	""	"809"	"55"	"36.000"	"29.000"	"0.000128209003880109"	"24"	"0"	"1.014E-05"	"1.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVGVPAAFDMMLTGR"	"[K].mVGVPAAFDMMLTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"912.97162"	"1824.93596"	"1824.93718"	"-0.67"	"-0.00061"	"10/120"	"10"	"120"	"514233.555297852"	"HCD"	"MS2"	"46.63249"	"29.0"	"100.000"	"81.9340"	"27834"	"27834"	"27808"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.5"	""	"38.4"	""	"50.2"	""	"33.9"	"0.6"	"47.4"	"57.6"	""	"957"	"26"	"36.000"	"29.000"	"0.125280056943279"	"14"	"0.0001889"	"0.0006586"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVGVPAAFDMMLTGR"	"[K].mVGVPAAFDMMLTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"912.97180"	"1824.93633"	"1824.93718"	"-0.47"	"-0.00043"	"9/120"	"9"	"120"	"400786.870483398"	"HCD"	"MS2"	"27.59228"	"19.4"	"100.000"	"81.9522"	"27892"	"27892"	"27870"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.4"	""	"24.9"	""	"27.0"	""	"22.3"	"2.2"	"37.4"	"40.6"	""	"977"	"46"	"36.000"	"29.000"	"0.00122141870918871"	"21"	"0"	"0.0001387"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVGVPAAFDMMLTGR"	"[K].mVGVPAAFDMMLTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.98419"	"1824.93802"	"1824.93718"	"0.46"	"0.00028"	"17/120"	"17"	"120"	"2069804.25280762"	"HCD"	"MS2"	"17.80324"	"23.6"	"100.000"	"81.9963"	"27859"	"27859"	"27840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.5"	""	"30.8"	""	"35.2"	""	"33.6"	""	"42.0"	"47.4"	""	"981"	"51"	"36.000"	"29.000"	"0.000399612451312222"	"16"	"0"	"3.793E-06"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVGVPAAFDMMLTGR"	"[K].mVGVPAAFDMMLTGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.98474"	"1824.93967"	"1824.93718"	"1.36"	"0.00083"	"18/120"	"18"	"120"	"2346600.41619873"	"HCD"	"MS2"	"11.8998"	"25.8"	"100.000"	"82.0285"	"27923"	"27923"	"27902"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.0"	""	"30.3"	""	"40.7"	""	"42.9"	"1.7"	"45.8"	"48.4"	""	"981"	"52"	"36.000"	"29.000"	"0.000322581169222834"	"16"	"0"	"6.862E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSGPFEPDLYK"	"[R].iTSGPFEPDLYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"609.00946"	"1825.01383"	"1825.01477"	"-0.52"	"-0.00031"	"11/102"	"11"	"102"	"2939745.98925781"	"HCD"	"MS2"	"0"	"99.6"	"100.000"	"57.7665"	"17992"	"17992"	"17963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.0"	""	"128.6"	""	"118.8"	""	"176.1"	"0.0"	"205.2"	"197.8"	""	"1004"	"33"	"37.000"	"30.000"	"0.0262242886877558"	"25"	"0.0001889"	"0.0004636"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSGPFEPDLYK"	"[R].iTSGPFEPDLYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"913.01080"	"1825.01433"	"1825.01477"	"-0.24"	"-0.00022"	"10/102"	"10"	"102"	"1161873.62145996"	"HCD"	"MS2"	"0"	"95.8"	"100.000"	"57.9588"	"18124"	"18124"	"18101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.3"	""	"119.7"	""	"140.0"	""	"154.9"	""	"192.6"	"184.1"	""	"985"	"35"	"36.000"	"29.000"	"0.014008970954181"	"24"	"0"	"2.166E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSGPFEPDLYK"	"[R].iTSGPFEPDLYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"609.00970"	"1825.01456"	"1825.01477"	"-0.12"	"-0.00007"	"11/102"	"11"	"102"	"2880557.59179688"	"HCD"	"MS2"	"12.04842"	"98.7"	"100.000"	"57.9679"	"18128"	"18128"	"18101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.8"	""	"117.4"	""	"145.7"	""	"174.2"	"1.5"	"194.5"	"191.9"	""	"985"	"34"	"36.000"	"29.000"	"0.0203894839848717"	"24"	"0.0001308"	"0.0002742"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSGPFEPDLYK"	"[R].iTSGPFEPDLYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"913.01105"	"1825.01482"	"1825.01477"	"0.02"	"0.00002"	"10/102"	"10"	"102"	"1069287.81976318"	"HCD"	"MS2"	"0"	"87.2"	"100.000"	"57.7919"	"18002"	"18002"	"17979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.4"	""	"109.9"	""	"114.0"	""	"144.5"	""	"177.1"	"173.7"	""	"984"	"54"	"36.000"	"29.000"	"0.000195418242338965"	"25"	"0"	"4.732E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVMPSPK"	"[R].imNTFSVMPSPk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K12(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"609.33649"	"1825.99491"	"1825.99563"	"-0.40"	"-0.00024"	"9/118"	"9"	"118"	"3566744.31634521"	"HCD"	"MS2"	"42.46428"	"164.4"	"100.000"	"51.6721"	"15572"	"15572"	"15542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.7"	""	"183.0"	""	"195.7"	""	"228.5"	"1.3"	"293.8"	"468.5"	""	"1120"	"26"	"37.000"	"30.000"	"0.154948732143045"	"17"	"7.476E-05"	"0.0001876"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVMPSPK"	"[R].iMNTFSVmPSPk.[V]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"609.33704"	"1825.99656"	"1825.99563"	"0.50"	"0.00031"	"11/118"	"11"	"118"	"5133517.92126465"	"HCD"	"MS2"	"17.14458"	"181.4"	"100.000"	"50.9016"	"15256"	"15256"	"15238"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.2"	""	"267.7"	""	"292.1"	""	"246.8"	"1.1"	"314.5"	"307.5"	""	"1117"	"24"	"37.000"	"30.000"	"0.224917463670769"	"20"	"0.0001889"	"0.0007678"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNTFSVMPSPK"	"[R].iMNTFSVmPSPk.[V]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"609.33722"	"1825.99710"	"1825.99563"	"0.81"	"0.00049"	"13/118"	"13"	"118"	"5252887.79663086"	"HCD"	"MS2"	"29.85819"	"171.8"	"100.000"	"50.7105"	"15128"	"15128"	"15106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.3"	""	"265.4"	""	"282.9"	""	"232.2"	""	"299.7"	"275.6"	""	"1120"	"26"	"37.000"	"30.000"	"0.147295007546141"	"23"	"7.476E-05"	"0.0002038"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYAFNPLAGGLLTGR"	"[R].fYAFNPLAGGLLTGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38918"	"Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus OX=10116 GN=Akr7a3 PE=1 SV=2"	"P38918"	"Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus OX=10116 GN=Akr7a3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.34277"	"1826.01377"	"1826.01622"	"-1.34"	"-0.00082"	"11/132"	"11"	"132"	"1036127.41912842"	"HCD"	"MS2"	"31.04052"	"17.3"	"100.000"	"82.2294"	"27954"	"27954"	"27936"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.1"	""	"24.6"	""	"23.4"	""	"34.2"	""	"30.7"	"26.5"	""	"1049"	"26"	"37.000"	"30.000"	"0.125818786602572"	"14"	"0"	"9.145E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYAFNPLAGGLLTGR"	"[R].fYAFNPLAGGLLTGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38918"	"Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus OX=10116 GN=Akr7a3 PE=1 SV=2"	"P38918"	"Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus OX=10116 GN=Akr7a3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"913.51080"	"1826.01433"	"1826.01622"	"-1.04"	"-0.00095"	"11/132"	"11"	"132"	"570007.153320313"	"HCD"	"MS2"	"39.24166"	"31.1"	"100.000"	"82.2246"	"28003"	"28003"	"27982"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.6"	""	"45.5"	""	"48.5"	""	"40.4"	"0.4"	"51.9"	"57.5"	""	"1044"	"34"	"37.000"	"30.000"	"0.0192163324241401"	"15"	"0.0001889"	"0.0004413"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYAFNPLAGGLLTGR"	"[R].fYAFNPLAGGLLTGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38918"	"Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus OX=10116 GN=Akr7a3 PE=1 SV=2"	"P38918"	"Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus OX=10116 GN=Akr7a3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"913.51099"	"1826.01470"	"1826.01622"	"-0.83"	"-0.00076"	"12/132"	"12"	"132"	"517891.456420898"	"HCD"	"MS2"	"38.1792"	"32.5"	"100.000"	"82.2344"	"27956"	"27956"	"27936"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.3"	""	"41.3"	""	"54.3"	""	"48.5"	"0.1"	"47.9"	"66.2"	""	"1048"	"34"	"37.000"	"30.000"	"0.0200600165498015"	"15"	"0.0001889"	"0.0004148"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYAFNPLAGGLLTGR"	"[R].fYAFNPLAGGLLTGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38918"	"Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus OX=10116 GN=Akr7a3 PE=1 SV=2"	"P38918"	"Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus OX=10116 GN=Akr7a3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.34326"	"1826.01523"	"1826.01622"	"-0.54"	"-0.00033"	"13/132"	"13"	"132"	"427804.004455566"	"HCD"	"MS2"	"34.49144"	"14.7"	"100.000"	"82.3606"	"28059"	"28059"	"28030"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.0"	""	"16.4"	""	"19.5"	""	"28.5"	""	"27.9"	"23.7"	""	"1045"	"19"	"37.000"	"30.000"	"0.65476626390689"	"14"	"0.0001308"	"0.0002136"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHSSMVGVNLPQK"	"[R].aHSSMVGVNLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.34924"	"1826.03318"	"1826.03586"	"-1.47"	"-0.00089"	"10/106"	"10"	"106"	"5369381.95452881"	"HCD"	"MS2"	"7.015548"	"129.4"	"72.090"	"35.8316"	"9110"	"9110"	"9081"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.4"	""	"186.8"	""	"188.6"	""	"153.8"	"3.7"	"232.4"	"247.9"	""	"971"	"53"	"36.000"	"29.000"	"0.000238335773872089"	"16"	"0"	"2.834E-06"	"1.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHSSMVGVNLPQK"	"[R].aHSSMVGVNLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"609.34924"	"1826.03318"	"1826.03586"	"-1.47"	"-0.00089"	"10/106"	"10"	"106"	"4535742.65264893"	"HCD"	"MS2"	"2.892739"	"157.5"	"100.000"	"35.7744"	"9043"	"9043"	"9019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.8"	""	"241.0"	""	"223.1"	""	"210.7"	"4.9"	"263.0"	"298.3"	""	"971"	"60"	"36.000"	"29.000"	"5.23828633642582E-05"	"18"	"0"	"4.868E-06"	"1.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSSTWLTAFVLK"	"[R].dSSTWLTAFVLk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"609.35297"	"1826.04435"	"1826.04641"	"-1.13"	"-0.00069"	"9/100"	"9"	"100"	"3228119.79412842"	"HCD"	"MS2"	"9.573753"	"79.0"	"100.000"	"82.9955"	"28318"	"28318"	"28301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.3"	""	"140.4"	""	"100.9"	""	"139.0"	""	"103.5"	"110.5"	""	"895"	"42"	"36.000"	"29.000"	"0.00295660317983399"	"23"	"0"	"3.742E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSSTWLTAFVLK"	"[R].dSSTWLTAFVLk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"609.35315"	"1826.04489"	"1826.04641"	"-0.83"	"-0.00050"	"11/100"	"11"	"100"	"2873446.29882813"	"HCD"	"MS2"	"7.156679"	"68.2"	"100.000"	"82.9409"	"28244"	"28244"	"28224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.4"	""	"121.4"	""	"91.3"	""	"115.7"	"0.9"	"86.3"	"87.9"	""	"906"	"40"	"36.000"	"29.000"	"0.00461421898788515"	"20"	"0"	"5.029E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSSTWLTAFVLK"	"[R].dSSTWLTAFVLk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"913.52637"	"1826.04546"	"1826.04641"	"-0.52"	"-0.00047"	"12/100"	"12"	"100"	"207343.503479004"	"HCD"	"MS2"	"22.1768"	"17.1"	"100.000"	"83.1710"	"28338"	"28338"	"28319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.8"	""	"32.2"	""	"22.8"	""	"30.7"	""	"21.5"	"23.3"	""	"905"	"33"	"36.000"	"29.000"	"0.0232069776256093"	"15"	"0"	"7.468E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSSTWLTAFVLK"	"[R].dSSTWLTAFVLk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"913.52698"	"1826.04668"	"1826.04641"	"0.15"	"0.00014"	"12/100"	"12"	"100"	"176135.473144531"	"HCD"	"MS2"	"8.364133"	"14.6"	"100.000"	"83.2119"	"28406"	"28406"	"28381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.8"	""	"22.0"	""	"19.3"	""	"28.1"	""	"20.2"	"20.1"	""	"900"	"26"	"36.000"	"29.000"	"0.104764106594925"	"14"	"0"	"0.000123"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSSTWLTAFVLK"	"[R].dSSTWLTAFVLk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"913.52783"	"1826.04839"	"1826.04641"	"1.08"	"0.00099"	"8/100"	"8"	"100"	"378368.842041016"	"HCD"	"MS2"	"18.26806"	"31.7"	"100.000"	"82.8984"	"28278"	"28278"	"28253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.0"	""	"57.4"	""	"34.0"	""	"60.4"	""	"37.1"	"44.7"	""	"873"	"46"	"36.000"	"29.000"	"0.00110913458597227"	"20"	"0"	"3.696E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSSTWLTAFVLK"	"[R].dSSTWLTAFVLk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"913.52789"	"1826.04851"	"1826.04641"	"1.15"	"0.00105"	"9/100"	"9"	"100"	"343889.803283691"	"HCD"	"MS2"	"18.47631"	"29.3"	"100.000"	"82.8783"	"28219"	"28219"	"28192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.8"	""	"48.6"	""	"36.7"	""	"49.8"	""	"39.0"	"42.7"	""	"882"	"58"	"36.000"	"29.000"	"7.84221219827164E-05"	"21"	"0"	"1.265E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVIQSISAQQEK"	"[K].hVIQSISAQQEk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.35553"	"1826.05204"	"1826.05362"	"-0.87"	"-0.00053"	"10/116"	"10"	"116"	"527416.226196289"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"30.6309"	"6991"	"6991"	"6960"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.5"	""	"49.4"	""	"47.1"	""	"51.2"	""	"64.2"	"81.6"	""	"845"	"36"	"36.000"	"29.000"	"0.0103711451687692"	"15"	"7.476E-05"	"0.0001972"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIYPPINVLPSLSR"	"[R].qIYPPINVLPSLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"913.54022"	"1826.07317"	"1826.07374"	"-0.31"	"-0.00028"	"7/134"	"7"	"134"	"585118.440551758"	"HCD"	"MS2"	"19.97428"	"36.0"	"100.000"	"69.0163"	"22625"	"22625"	"22602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.0"	""	"48.4"	""	"43.3"	""	"61.0"	""	"71.2"	"74.8"	""	"652"	"32"	"35.000"	"28.000"	"0.0187593419571913"	"26"	"0.0003571"	"0.001525"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIYPPINVLPSLSR"	"[R].qIYPPINVLPSLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.6393"	"0.0000"	"1"	"1"	"1"	"913.54022"	"1826.07317"	"1826.07374"	"-0.31"	"-0.00028"	"12/134"	"12"	"134"	"745940.768066406"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"68.8264"	"22496"	"22496"	"22474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.9"	""	"44.4"	""	"42.5"	""	"47.6"	"0.9"	"48.9"	"48.1"	""	"652"	"61"	"35.000"	"28.000"	"2.40003513783284E-05"	""	"0"	"8.647E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIYPPINVLPSLSR"	"[R].qIYPPINVLPSLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"913.54089"	"1826.07451"	"1826.07374"	"0.42"	"0.00039"	"11/134"	"11"	"134"	"582240.660400391"	"HCD"	"MS2"	"100"	"36.2"	"100.000"	"69.1514"	"22629"	"22629"	"22602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.2"	""	"50.1"	""	"40.6"	""	"68.3"	""	"72.8"	"63.5"	""	"630"	"12"	"34.000"	"27.000"	"1.97838383026195"	"19"	"0.001158"	"0.01537"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIYPPINVLPSLSR"	"[R].qIYPPINVLPSLSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.6308"	"0.0000"	"1"	"1"	"1"	"913.54095"	"1826.07463"	"1826.07374"	"0.49"	"0.00045"	"12/134"	"12"	"134"	"788396.086791992"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"68.7027"	"22497"	"22497"	"22474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.6"	""	"38.5"	""	"47.1"	""	"40.4"	"2.4"	"47.4"	"55.2"	""	"629"	"65"	"34.000"	"27.000"	"1.06321390986781E-05"	""	"0"	"5.791E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVEVEPVGLLK"	"[K].vWVEVEPVGLLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"913.56146"	"1826.11565"	"1826.11918"	"-1.93"	"-0.00176"	"4/92"	"4"	"92"	"116532.794555664"	"HCD"	"MS2"	"100"	"9.4"	"100.000"	"77.1557"	"25936"	"25936"	"25909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"14.3"	""	"11.1"	""	"18.6"	"1.4"	"18.2"	"16.5"	""	"364"	"10"	"32.000"	"25.000"	"1.84957262102466"	"13"	"0.00423"	"0.1083"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVEVEPVGLLK"	"[K].vWVEVEPVGLLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"913.56219"	"1826.11711"	"1826.11918"	"-1.13"	"-0.00103"	"11/92"	"11"	"92"	"1114096.99633789"	"HCD"	"MS2"	"0"	"72.6"	"100.000"	"76.8671"	"25767"	"25767"	"25751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.5"	""	"100.4"	""	"116.9"	""	"102.2"	""	"131.9"	"145.5"	""	"359"	"49"	"32.000"	"25.000"	"0.000223905340806608"	"16"	"0"	"7.989E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVEVEPVGLLK"	"[K].vWVEVEPVGLLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"609.37769"	"1826.11850"	"1826.11918"	"-0.37"	"-0.00022"	"13/92"	"13"	"92"	"2407999.8817749"	"HCD"	"MS2"	"16.42396"	"62.0"	"100.000"	"76.8077"	"25743"	"25743"	"25736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.0"	""	"96.8"	""	"99.1"	""	"91.5"	""	"113.5"	"114.6"	""	"333"	"54"	"32.000"	"25.000"	"6.95687560466625E-05"	"19"	"0"	"3.64E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVEVEPVGLLK"	"[K].vWVEVEPVGLLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"609.37769"	"1826.11850"	"1826.11918"	"-0.37"	"-0.00022"	"14/92"	"14"	"92"	"3757096.01000977"	"HCD"	"MS2"	"3.222019"	"92.0"	"100.000"	"76.8222"	"25800"	"25800"	"25786"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.9"	""	"149.8"	""	"139.0"	""	"142.4"	""	"161.3"	"177.2"	""	"333"	"44"	"32.000"	"25.000"	"0.000710254898804651"	"17"	"0"	"5.815E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVEVEPVGLLK"	"[K].vWVEVEPVGLLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"913.56445"	"1826.12163"	"1826.11918"	"1.34"	"0.00123"	"17/92"	"17"	"92"	"1014417.6539917"	"HCD"	"MS2"	"0"	"62.8"	"100.000"	"76.7968"	"25789"	"25789"	"25774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.2"	""	"96.1"	""	"98.5"	""	"86.5"	""	"114.8"	"127.5"	""	"323"	"39"	"32.000"	"25.000"	"0.00204254920116591"	"15"	"0"	"7.156E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELVIPEVWVGK"	"[R].vELVIPEVWVGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"609.38171"	"1826.13059"	"1826.11918"	"6.25"	"0.00380"	"10/98"	"10"	"98"	"1035237.58013916"	"HCD"	"MS2"	"25.23148"	"21.1"	"100.000"	"81.8000"	"27779"	"27779"	"27760"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.3"	""	"31.4"	""	"30.2"	""	"37.5"	""	"33.3"	"42.9"	""	"292"	"14"	"31.000"	"24.000"	"0.627123183076735"	"19"	"0.0008731"	"0.008625"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELVIPEVWVGK"	"[R].vELVIPEVWVGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.38177"	"1826.13077"	"1826.11918"	"6.35"	"0.00386"	"11/98"	"11"	"98"	"1185985.27703857"	"HCD"	"MS2"	"20.32192"	"22.7"	"100.000"	"81.8390"	"27846"	"27846"	"27822"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.5"	""	"27.7"	""	"40.1"	"2.1"	"35.5"	""	"32.2"	"42.3"	""	"292"	"17"	"31.000"	"24.000"	"0.309993691452032"	"14"	"0.00103"	"0.01279"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDTVRPDIVVK"	"[K].lLDTVRPDIVVk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.38757"	"1826.14817"	"1826.15154"	"-1.85"	"-0.00112"	"11/110"	"11"	"110"	"4491642.02258301"	"HCD"	"MS2"	"54.5516"	"217.3"	"100.000"	"53.7432"	"16406"	"16406"	"16396"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"308.8"	""	"268.9"	""	"306.5"	""	"346.4"	"0.1"	"426.5"	"403.0"	""	"233"	"8"	"30.000"	"23.000"	"1.98301466228012"	"13"	"0"	"0.0001754"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDTVRPDIVVK"	"[K].lLDTVRPDIVVk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.38794"	"1826.14927"	"1826.15154"	"-1.25"	"-0.00076"	"7/110"	"7"	"110"	"4755050.29382324"	"HCD"	"MS2"	"11.8449"	"227.1"	"100.000"	"53.5851"	"16288"	"16288"	"16275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"312.8"	""	"281.1"	""	"318.5"	""	"388.8"	"10.1"	"412.4"	"428.3"	""	"231"	"21"	"30.000"	"23.000"	"0.0974051645217739"	"14"	"0"	"7.227E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKPGDLVGVNK"	"[K].lkPGDLVGVNk.[D]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"609.72656"	"1827.16513"	"1827.16708"	"-1.07"	"-0.00065"	"14/98"	"14"	"98"	"18552004.3374023"	"HCD"	"MS2"	"25.11797"	"671.9"	"68.336"	"41.0729"	"11214"	"11214"	"11189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"966.4"	""	"957.0"	""	"963.2"	""	"1055.5"	"0.1"	"1228.1"	"1192.5"	""	"155"	"29"	"28.000"	"21.000"	"0.00885730709462073"	"15"	"0"	"0.0001014"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKPGDLVGVNK"	"[K].lkPGDLVGVNk.[D]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"609.72699"	"1827.16642"	"1827.16708"	"-0.36"	"-0.00022"	"15/98"	"15"	"98"	"18141953.3062134"	"HCD"	"MS2"	"26.02854"	"593.9"	"61.774"	"41.2585"	"11334"	"11334"	"11309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"873.9"	""	"850.0"	""	"826.5"	""	"945.7"	"1.5"	"1068.8"	"1057.3"	""	"149"	"35"	"28.000"	"21.000"	"0.00221389119364483"	"15"	"0"	"4.743E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPGDVFAALPQLTR"	"[K].tLPGDVFAALPQLTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O08770"	"Platelet glycoprotein V OS=Rattus norvegicus OX=10116 GN=Gp5 PE=3 SV=1"	"O08770"	"Platelet glycoprotein V OS=Rattus norvegicus OX=10116 GN=Gp5 PE=3 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"914.52936"	"1828.05144"	"1828.05300"	"-0.85"	"-0.00078"	"9/144"	"9"	"144"	"204614.078369141"	"HCD"	"MS2"	"15.21488"	"14.8"	"100.000"	"78.2641"	"26388"	"26388"	"26367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.6"	""	"22.6"	""	"15.7"	""	"25.1"	""	"27.8"	"32.7"	""	"849"	"30"	"36.000"	"29.000"	"0.0415793498805993"	"17"	"0.0004166"	"0.002263"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPGDVFAALPQLTR"	"[K].tLPGDVFAALPQLTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O08770"	"Platelet glycoprotein V OS=Rattus norvegicus OX=10116 GN=Gp5 PE=3 SV=1"	"O08770"	"Platelet glycoprotein V OS=Rattus norvegicus OX=10116 GN=Gp5 PE=3 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"610.02203"	"1828.05155"	"1828.05300"	"-0.79"	"-0.00048"	"16/144"	"16"	"144"	"1102636.48980713"	"HCD"	"MS2"	"34.35705"	"19.9"	"100.000"	"78.3770"	"26434"	"26434"	"26415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.4"	""	"26.6"	""	"25.2"	""	"39.7"	""	"33.5"	"44.3"	""	"845"	"30"	"36.000"	"29.000"	"0.0377421566877317"	"20"	"0"	"4.477E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPGDVFAALPQLTR"	"[K].tLPGDVFAALPQLTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O08770"	"Platelet glycoprotein V OS=Rattus norvegicus OX=10116 GN=Gp5 PE=3 SV=1"	"O08770"	"Platelet glycoprotein V OS=Rattus norvegicus OX=10116 GN=Gp5 PE=3 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"610.02216"	"1828.05191"	"1828.05300"	"-0.59"	"-0.00036"	"13/144"	"13"	"144"	"1264479.97393799"	"HCD"	"MS2"	"18.7769"	"17.7"	"100.000"	"78.2647"	"26338"	"26338"	"26321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.9"	""	"19.1"	""	"28.4"	""	"29.0"	""	"33.2"	"37.7"	""	"836"	"24"	"36.000"	"29.000"	"0.154232636202323"	"17"	"7.476E-05"	"0.0001903"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPGDVFAALPQLTR"	"[K].tLPGDVFAALPQLTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O08770"	"Platelet glycoprotein V OS=Rattus norvegicus OX=10116 GN=Gp5 PE=3 SV=1"	"O08770"	"Platelet glycoprotein V OS=Rattus norvegicus OX=10116 GN=Gp5 PE=3 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"914.53015"	"1828.05303"	"1828.05300"	"0.01"	"0.00001"	"7/144"	"7"	"144"	"162179.209594727"	"HCD"	"MS2"	"25.83001"	"12.2"	"100.000"	"78.1792"	"26303"	"26303"	"26273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.3"	""	"17.0"	""	"17.3"	""	"21.1"	""	"23.4"	"24.7"	""	"841"	"15"	"36.000"	"29.000"	"1.25824727969374"	"16"	"0.001217"	"0.01843"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLTEPPMNPTK"	"[K].iLLTEPPmNPTk.[N]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.9815"	"0.0000"	"1"	"1"	"1"	"914.53406"	"1828.06084"	"1828.06543"	"-2.51"	"-0.00229"	"9/108"	"9"	"108"	"565250.257263184"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"48.2610"	"14184"	"14184"	"14159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.5"	""	"32.5"	""	"34.0"	""	"74.9"	"0.2"	"55.9"	"46.0"	""	"786"	"54"	"35.000"	"28.000"	"0.000152894741982752"	"17"	"0.0001889"	"0.000778"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLTEPPMNPTK"	"[K].iLLTEPPmNPTk.[N]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"914.53571"	"1828.06413"	"1828.06543"	"-0.71"	"-0.00065"	"13/108"	"13"	"108"	"752562.263305664"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"47.8257"	"13958"	"13958"	"13928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.4"	""	"42.3"	""	"53.0"	""	"94.9"	""	"76.6"	"69.0"	""	"767"	"35"	"35.000"	"28.000"	"0.0135757980305497"	"15"	"0.0002723"	"0.001365"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAQNIIPASTGAAK"	"[R].gAAQNIIPASTGAAk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"610.02722"	"1828.06711"	"1828.06927"	"-1.18"	"-0.00072"	"15/136"	"15"	"136"	"13030412.8952637"	"HCD"	"MS2"	"3.592537"	"377.4"	"94.566"	"37.6212"	"9844"	"9844"	"9825"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"612.5"	""	"520.1"	""	"519.6"	""	"523.6"	""	"641.8"	"758.6"	""	"740"	"49"	"35.000"	"28.000"	"0.000462595841180556"	"19"	"0"	"3.518E-05"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAQNIIPASTGAAK"	"[R].gAAQNIIPASTGAAk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8659"	"0.0000"	"1"	"1"	"1"	"914.53723"	"1828.06719"	"1828.06927"	"-1.14"	"-0.00104"	"11/136"	"11"	"136"	"2417632.95928955"	"HCD"	"MS2"	"0"	"143.3"	"100.000"	"37.5716"	"9781"	"9781"	"9752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.5"	""	"185.7"	""	"210.3"	""	"190.0"	"1.8"	"223.1"	"272.6"	""	"740"	"82"	"35.000"	"28.000"	"2.53630643787485E-07"	""	"0"	"1.232E-06"	"1.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAQNIIPASTGAAK"	"[R].gAAQNIIPASTGAAk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.8491"	"0.0000"	"1"	"1"	"1"	"610.02740"	"1828.06766"	"1828.06927"	"-0.88"	"-0.00054"	"13/136"	"13"	"136"	"18301691.7191772"	"HCD"	"MS2"	"6.391676"	"438.4"	"86.642"	"37.5486"	"9771"	"9771"	"9752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"694.6"	""	"592.7"	""	"619.7"	""	"624.4"	""	"740.2"	"882.0"	""	"742"	"53"	"35.000"	"28.000"	"0.000173929764775893"	"24"	"0"	"2.771E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAQNIIPASTGAAK"	"[R].gAAQNIIPASTGAAk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"914.53790"	"1828.06853"	"1828.06927"	"-0.40"	"-0.00037"	"19/136"	"19"	"136"	"2483569.51965332"	"HCD"	"MS2"	"0"	"145.0"	"100.000"	"37.6464"	"9855"	"9855"	"9825"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.7"	""	"200.9"	""	"210.3"	""	"206.7"	""	"238.8"	"278.5"	""	"730"	"56"	"35.000"	"28.000"	"9.44697714030879E-05"	"27"	"0"	"2.238E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPFPDFVYK"	"[R].kPFPDFVYk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"914.54895"	"1828.09062"	"1828.09760"	"-3.82"	"-0.00349"	"5/80"	"5"	"80"	"651986.811035156"	"HCD"	"MS2"	"100"	"61.4"	"100.000"	"50.4224"	"15061"	"15061"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.1"	""	"68.4"	""	"88.3"	""	"92.7"	""	"122.4"	"126.9"	""	"553"	"18"	"34.000"	"27.000"	"0.402434435780913"	"14"	"0.003788"	"0.09291"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPFPDFVYK"	"[R].kPFPDFVYk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.03601"	"1828.09348"	"1828.09760"	"-2.26"	"-0.00137"	"7/80"	"7"	"80"	"10892739.0129395"	"HCD"	"MS2"	"50.49228"	"608.0"	"100.000"	"49.7972"	"14761"	"14761"	"14735"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"923.1"	""	"875.9"	""	"889.7"	""	"970.1"	"2.9"	"1049.9"	"1041.3"	""	"556"	"27"	"34.000"	"27.000"	"0.0537087192130704"	"14"	"0.0001889"	"0.0004235"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPFPDFVYK"	"[R].kPFPDFVYk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.03607"	"1828.09366"	"1828.09760"	"-2.16"	"-0.00131"	"8/80"	"8"	"80"	"32255960.0861816"	"HCD"	"MS2"	"0"	"599.9"	"35.706"	"50.1156"	"14937"	"14937"	"14919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"920.0"	""	"866.0"	""	"856.8"	""	"996.3"	""	"995.6"	"1040.8"	""	"554"	"28"	"34.000"	"27.000"	"0.0399465952372389"	"14"	"0.0001889"	"0.0004435"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIQASTMAFK"	"[K].kIQASTmAFk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); M7(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.03619"	"1828.09403"	"1828.09695"	"-1.60"	"-0.00097"	"10/92"	"10"	"92"	"9960680.15881348"	"HCD"	"MS2"	"16.42679"	"478.1"	"100.000"	"34.3548"	"8461"	"8461"	"8435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"754.7"	""	"739.3"	""	"717.0"	""	"744.2"	""	"634.3"	"932.2"	""	"554"	"22"	"34.000"	"27.000"	"0.185985792260489"	"14"	"0.0001889"	"0.0004444"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIQASTMAFK"	"[K].kIQASTmAFk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); M7(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.03632"	"1828.09439"	"1828.09695"	"-1.40"	"-0.00085"	"8/92"	"8"	"92"	"6454203.95581055"	"HCD"	"MS2"	"27.37669"	"333.0"	"100.000"	"34.4508"	"8543"	"8543"	"8522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"528.5"	""	"502.4"	""	"492.6"	""	"452.4"	"0.0"	"411.5"	"760.5"	""	"570"	"14"	"34.000"	"27.000"	"1.03715785296254"	"13"	"0.000523"	"0.003037"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPFPDFVYK"	"[R].kPFPDFVYk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.03656"	"1828.09513"	"1828.09760"	"-1.35"	"-0.00083"	"8/80"	"8"	"80"	"91389683.1689453"	"HCD"	"MS2"	"6.296375"	"602.5"	"12.757"	"50.3928"	"15049"	"15049"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"877.2"	""	"842.4"	""	"851.9"	""	"939.1"	"3.6"	"1028.6"	"1162.2"	""	"557"	"27"	"34.000"	"27.000"	"0.0516208557121025"	"14"	"0.0001889"	"0.0008693"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPFPDFVYK"	"[R].kPFPDFVYk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.03680"	"1828.09586"	"1828.09760"	"-0.95"	"-0.00058"	"8/80"	"8"	"80"	"101292790.837891"	"HCD"	"MS2"	"6.079732"	"649.0"	"12.277"	"50.0618"	"14866"	"14866"	"14857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"951.0"	""	"896.2"	""	"919.0"	""	"1069.9"	"2.0"	"1126.4"	"1179.6"	""	"557"	"29"	"34.000"	"27.000"	"0.0393391706177437"	"14"	"0.0001889"	"0.0005456"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPFPDFVYK"	"[R].kPFPDFVYk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.03680"	"1828.09586"	"1828.09760"	"-0.95"	"-0.00058"	"7/80"	"7"	"80"	"9072394.37683105"	"HCD"	"MS2"	"7.130841"	"427.7"	"88.017"	"50.6767"	"15164"	"15164"	"15146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"612.3"	""	"599.1"	""	"612.5"	""	"638.8"	""	"761.8"	"832.1"	""	"557"	"25"	"34.000"	"27.000"	"0.0897067658372437"	"14"	"0.0001889"	"0.0004443"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPFPDFVYK"	"[R].kPFPDFVYk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.03693"	"1828.09623"	"1828.09760"	"-0.75"	"-0.00046"	"8/80"	"8"	"80"	"27917423.1265869"	"HCD"	"MS2"	"5.996536"	"542.0"	"38.129"	"50.3252"	"14971"	"14971"	"14964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"795.2"	""	"700.4"	""	"771.7"	""	"846.5"	"1.3"	"960.1"	"1059.2"	""	"555"	"29"	"34.000"	"27.000"	"0.0389280803015943"	"14"	"0.0001889"	"0.000379"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVMk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"914.55914"	"1828.11101"	"1828.11305"	"-1.11"	"-0.00102"	"12/114"	"12"	"114"	"1591127.14044189"	"HCD"	"MS2"	"0"	"114.9"	"100.000"	"58.9592"	"18529"	"18529"	"18501"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.3"	""	"187.4"	""	"190.4"	""	"156.7"	""	"204.0"	"208.0"	""	"434"	"56"	"33.000"	"26.000"	"6.11589096084387E-05"	"16"	"0"	"2.995E-06"	"1.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVMk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.04218"	"1828.11197"	"1828.11305"	"-0.59"	"-0.00036"	"7/114"	"7"	"114"	"21188365.0227051"	"HCD"	"MS2"	"7.636928"	"273.8"	"53.852"	"59.2122"	"18631"	"18631"	"18613"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"343.0"	""	"412.5"	""	"446.5"	""	"395.5"	""	"466.8"	"531.1"	""	"426"	"50"	"33.000"	"26.000"	"0.000236254235650892"	"16"	"0"	"1.399E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVMk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.04230"	"1828.11234"	"1828.11305"	"-0.39"	"-0.00024"	"10/114"	"10"	"114"	"6301792.78161621"	"HCD"	"MS2"	"13.09729"	"170.3"	"100.000"	"58.9060"	"18507"	"18507"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.0"	""	"255.3"	""	"264.5"	""	"248.1"	""	"301.7"	"335.4"	""	"420"	"46"	"33.000"	"26.000"	"0.000519062070453387"	"15"	"0"	"8.658E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVMk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.04236"	"1828.11252"	"1828.11305"	"-0.29"	"-0.00017"	"7/114"	"7"	"114"	"22706503.345459"	"HCD"	"MS2"	"9.068765"	"228.4"	"41.081"	"59.0729"	"18522"	"18522"	"18505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"284.1"	""	"344.0"	""	"352.0"	""	"320.1"	""	"388.9"	"476.2"	""	"420"	"53"	"33.000"	"26.000"	"0.000116203522935305"	"16"	"0"	"1.35E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVMk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9899"	"0.0000"	"1"	"1"	"1"	"914.56030"	"1828.11333"	"1828.11305"	"0.15"	"0.00014"	"22/114"	"22"	"114"	"1773951.08618164"	"HCD"	"MS2"	"0"	"122.4"	"100.000"	"59.3022"	"18668"	"18668"	"18645"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.8"	""	"181.6"	""	"202.7"	""	"163.8"	""	"222.8"	"255.6"	""	"417"	"99"	"33.000"	"26.000"	"2.69219218548422E-09"	"20"	"0"	"1.813E-07"	"1.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVMk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"914.56042"	"1828.11357"	"1828.11305"	"0.29"	"0.00026"	"22/114"	"22"	"114"	"1364602.80841064"	"HCD"	"MS2"	"0"	"103.3"	"100.000"	"58.8014"	"18415"	"18415"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.2"	""	"173.2"	""	"169.4"	""	"129.3"	""	"166.0"	"210.1"	""	"417"	"94"	"33.000"	"26.000"	"8.6917266453565E-09"	"18"	"0"	"1.376E-07"	"1.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVMk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"914.56061"	"1828.11394"	"1828.11305"	"0.49"	"0.00045"	"23/114"	"23"	"114"	"1630607.66247559"	"HCD"	"MS2"	"0"	"113.2"	"100.000"	"59.1584"	"18556"	"18556"	"18537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.2"	""	"172.6"	""	"177.9"	""	"168.5"	"2.5"	"189.2"	"224.6"	""	"417"	"106"	"33.000"	"26.000"	"5.43383015174769E-10"	"19"	"0"	"1.065E-07"	"1.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVMk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.04303"	"1828.11454"	"1828.11305"	"0.81"	"0.00050"	"9/114"	"9"	"114"	"6783343.78442383"	"HCD"	"MS2"	"15.41258"	"192.9"	"100.000"	"58.7691"	"18402"	"18402"	"18377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.5"	""	"289.9"	""	"321.2"	""	"278.7"	""	"350.0"	"356.6"	""	"421"	"51"	"33.000"	"26.000"	"0.000179991543062226"	"16"	"0"	"8.059E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLSPGSGVVTYYLR"	"[K].tSLSPGSGVVTYYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.9867"	"0.0000"	"1"	"1"	"1"	"915.00293"	"1828.99858"	"1829.00063"	"-1.12"	"-0.00102"	"14/132"	"14"	"132"	"1098581.71173096"	"HCD"	"MS2"	"0"	"53.7"	"100.000"	"55.2232"	"17006"	"17006"	"16981"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.6"	""	"87.1"	""	"89.4"	""	"72.4"	"1.3"	"68.6"	"82.1"	""	"1048"	"75"	"37.000"	"30.000"	"1.65703349392823E-06"	"18"	"0"	"4.557E-07"	"1.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLSPGSGVVTYYLR"	"[K].tSLSPGSGVVTYYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"915.00348"	"1828.99968"	"1829.00063"	"-0.52"	"-0.00047"	"13/132"	"13"	"132"	"1139827.12561035"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"55.0151"	"16867"	"16867"	"16843"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.4"	""	"101.9"	""	"97.4"	""	"81.8"	""	"77.5"	"87.8"	""	"1049"	"50"	"37.000"	"30.000"	"0.000478349685242175"	"18"	"0"	"4.043E-06"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLSPGSGVVTYYLR"	"[K].tSLSPGSGVVTYYLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"610.33826"	"1829.00022"	"1829.00063"	"-0.23"	"-0.00014"	"10/132"	"10"	"132"	"3286178.92242432"	"HCD"	"MS2"	"52.39228"	"74.5"	"100.000"	"55.2370"	"17012"	"17012"	"16981"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.1"	""	"100.0"	""	"110.0"	""	"104.8"	""	"130.5"	"137.3"	""	"1047"	"58"	"37.000"	"30.000"	"9.22394460296488E-05"	"22"	"0"	"3.292E-06"	"1.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSMYGVDLHHAK"	"[K].lSMYGVDLHHAk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WTP0"	"Band 4.1-like protein 1 OS=Rattus norvegicus OX=10116 GN=Epb41l1 PE=1 SV=1"	"Q9WTP0"	"Band 4.1-like protein 1 OS=Rattus norvegicus OX=10116 GN=Epb41l1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"458.00839"	"1829.01174"	"1829.01440"	"-1.45"	"-0.00066"	"11/98"	"11"	"98"	"20546697.0863647"	"HCD"	"MS2"	"12.62158"	"464.2"	"100.000"	"37.8283"	"9886"	"9886"	"9863"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"636.7"	""	"674.5"	""	"660.7"	""	"628.2"	""	"864.9"	"943.6"	""	"1046"	"31"	"37.000"	"30.000"	"0.0394004959832734"	"14"	"0.0001308"	"0.0002203"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSMYGVDLHHAK"	"[K].lSMYGVDLHHAk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WTP0"	"Band 4.1-like protein 1 OS=Rattus norvegicus OX=10116 GN=Epb41l1 PE=1 SV=1"	"Q9WTP0"	"Band 4.1-like protein 1 OS=Rattus norvegicus OX=10116 GN=Epb41l1 PE=1 SV=1"	"0"	"4"	"4"	"0.9630"	"0.0000"	"1"	"1"	"1"	"458.00879"	"1829.01333"	"1829.01440"	"-0.58"	"-0.00027"	"11/98"	"11"	"98"	"21978417.0667725"	"HCD"	"MS2"	"3.53879"	"379.0"	"73.039"	"37.9446"	"9977"	"9977"	"9953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"527.6"	""	"556.5"	""	"516.3"	""	"516.0"	""	"731.6"	"746.2"	""	"1006"	"27"	"37.000"	"30.000"	"0.1053338565293"	"15"	"0.0001308"	"0.0002723"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYELPFIVVLDHR"	"[K].vYELPFIVVLDHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C1S9"	"Sn1-specific diacylglycerol lipase beta OS=Rattus norvegicus OX=10116 GN=Daglb PE=1 SV=1"	"P0C1S9"	"Sn1-specific diacylglycerol lipase beta OS=Rattus norvegicus OX=10116 GN=Daglb PE=1 SV=1"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"610.35541"	"1829.05167"	"1829.05227"	"-0.33"	"-0.00020"	"13/112"	"13"	"112"	"1287283.15802002"	"HCD"	"MS2"	"25.88996"	"16.2"	"100.000"	"78.1538"	"26292"	"26292"	"26273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.4"	""	"26.1"	""	"19.0"	""	"30.0"	"1.4"	"27.1"	"33.5"	""	"912"	"26"	"36.000"	"29.000"	"0.105916797913884"	"23"	"0"	"0.0001248"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYELPFIVVLDHR"	"[K].vYELPFIVVLDHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C1S9"	"Sn1-specific diacylglycerol lipase beta OS=Rattus norvegicus OX=10116 GN=Daglb PE=1 SV=1"	"P0C1S9"	"Sn1-specific diacylglycerol lipase beta OS=Rattus norvegicus OX=10116 GN=Daglb PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"610.35553"	"1829.05204"	"1829.05227"	"-0.13"	"-0.00008"	"14/112"	"14"	"112"	"1239120.22106934"	"HCD"	"MS2"	"40.79564"	"15.4"	"100.000"	"78.0217"	"26289"	"26289"	"26271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.0"	""	"16.9"	""	"23.8"	""	"24.5"	""	"27.7"	"30.6"	""	"899"	"42"	"36.000"	"29.000"	"0.00301113131932728"	"16"	"0"	"2.801E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFAFAPVLLNVAAR"	"[R].nPFAFAPVLLNVAAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"610.35870"	"1829.06156"	"1829.06350"	"-1.06"	"-0.00065"	"15/142"	"15"	"142"	"1482495.31323242"	"HCD"	"MS2"	"10.45373"	"11.5"	"100.000"	"86.5387"	"29702"	"29702"	"29689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.3"	""	"14.5"	""	"16.8"	""	"15.3"	""	"24.7"	"24.2"	""	"854"	"60"	"36.000"	"29.000"	"4.13454644623553E-05"	"24"	"0"	"2.86E-06"	"1.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFAFAPVLLNVAAR"	"[R].nPFAFAPVLLNVAAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.03448"	"1829.06169"	"1829.06350"	"-0.99"	"-0.00091"	"6/142"	"6"	"142"	"448465.839355469"	"HCD"	"MS2"	"5.040484"	"16.5"	"100.000"	"86.5410"	"29703"	"29703"	"29689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.5"	""	"28.7"	""	"21.4"	""	"25.3"	""	"24.2"	"34.9"	""	"852"	"32"	"36.000"	"29.000"	"0.0240109641381857"	"15"	"0"	"0.0001422"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFAFAPVLLNVAAR"	"[R].nPFAFAPVLLNVAAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"915.03467"	"1829.06206"	"1829.06350"	"-0.79"	"-0.00072"	"6/142"	"6"	"142"	"435619.674804688"	"HCD"	"MS2"	"13.0837"	"19.2"	"100.000"	"86.2572"	"29588"	"29588"	"29569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.5"	""	"36.5"	""	"24.2"	""	"38.7"	""	"29.8"	"23.5"	""	"854"	"30"	"36.000"	"29.000"	"0.0451261076434232"	"21"	"0"	"8.608E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFAFAPVLLNVAAR"	"[R].nPFAFAPVLLNVAAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.35889"	"1829.06211"	"1829.06350"	"-0.76"	"-0.00047"	"17/142"	"17"	"142"	"1483737.52252197"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"86.2549"	"29587"	"29587"	"29569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"15.7"	""	"13.5"	""	"17.3"	""	"12.4"	"17.9"	""	"854"	"48"	"36.000"	"29.000"	"0.000656792031409396"	"16"	"0"	"4.363E-06"	"1.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFAFAPVLLNVAAR"	"[R].nPFAFAPVLLNVAAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.8382"	"0.0000"	"1"	"1"	"1"	"610.35889"	"1829.06211"	"1829.06350"	"-0.76"	"-0.00047"	"16/142"	"16"	"142"	"2039204.71240234"	"HCD"	"MS2"	"12.91762"	"11.4"	"100.000"	"86.3391"	"29674"	"29674"	"29654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"19.7"	""	"16.6"	""	"21.9"	""	"20.8"	"14.8"	""	"854"	"68"	"36.000"	"29.000"	"6.55281451655299E-06"	"27"	"0"	"2.41E-06"	"1.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFAFAPVLLNVAAR"	"[R].nPFAFAPVLLNVAAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"915.03473"	"1829.06218"	"1829.06350"	"-0.72"	"-0.00066"	"11/142"	"11"	"142"	"308133.133911133"	"HCD"	"MS2"	"8.390213"	"11.3"	"100.000"	"86.6254"	"29789"	"29789"	"29773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.1"	""	"20.2"	""	"13.8"	""	"23.2"	""	"17.2"	"16.4"	""	"856"	"37"	"36.000"	"29.000"	"0.0079881050767724"	"15"	"0"	"4.221E-05"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFAFAPVLLNVAAR"	"[R].nPFAFAPVLLNVAAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.35907"	"1829.06266"	"1829.06350"	"-0.46"	"-0.00028"	"16/142"	"16"	"142"	"1121805.75189209"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"86.6161"	"29786"	"29786"	"29773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.5"	""	"14.8"	""	"14.1"	""	"15.4"	""	"16.8"	"23.2"	""	"848"	"37"	"36.000"	"29.000"	"0.007913449889139"	"15"	"0"	"1.618E-05"	"1.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFAFAPVLLNVAAR"	"[R].nPFAFAPVLLNVAAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.03497"	"1829.06267"	"1829.06350"	"-0.46"	"-0.00042"	"12/142"	"12"	"142"	"478757.973999023"	"HCD"	"MS2"	"18.16198"	"18.8"	"100.000"	"86.3436"	"29676"	"29676"	"29654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.2"	""	"34.5"	""	"27.4"	""	"26.2"	""	"28.5"	"26.1"	""	"848"	"48"	"36.000"	"29.000"	"0.000625699570108979"	"16"	"0"	"2.571E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLSTIALALGVER"	"[K].kLSTIALALGVER.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.39258"	"1829.16318"	"1829.16244"	"0.41"	"0.00025"	"10/138"	"10"	"138"	"1938806.71240234"	"HCD"	"MS2"	"0"	"92.1"	"100.000"	"58.3614"	"18289"	"18289"	"18261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.7"	""	"119.1"	""	"143.0"	""	"145.2"	""	"169.0"	"169.5"	""	"164"	"18"	"29.000"	"22.000"	"0.140544499215691"	"14"	"0"	"0.0001338"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GELVPLETVLDMLR"	"[K].gELVPLETVLDmLR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"915.51569"	"1830.02410"	"1830.02440"	"-0.17"	"-0.00015"	"3/122"	"3"	"122"	"81780.5431518555"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"88.0456"	"30300"	"30300"	"30277"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.6"	""	"5.4"	""	"2.7"	""	"7.6"	""	"2.5"	"5.4"	""	"1073"	"4"	"37.000"	"30.000"	"22.9387488420326"	"14"	"0.006061"	"0.2123"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGSDVQQIAVTK"	"[R].iLGSDVQQIAVTk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"915.55762"	"1830.10796"	"1830.11007"	"-1.15"	"-0.00106"	"16/124"	"16"	"124"	"1399045.25097656"	"HCD"	"MS2"	"100"	"94.7"	"100.000"	"54.6512"	"16772"	"16772"	"16741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.3"	""	"135.0"	""	"128.5"	""	"154.5"	""	"176.4"	"160.4"	""	"538"	"46"	"34.000"	"27.000"	"0.000752925974981644"	"16"	"0"	"7.554E-06"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGSDVQQIAVTK"	"[R].iLGSDVQQIAVTk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.9385"	"0.0000"	"1"	"1"	"1"	"915.55768"	"1830.10808"	"1830.11007"	"-1.09"	"-0.00099"	"18/124"	"18"	"124"	"293371.780273438"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"54.7921"	"16776"	"16776"	"16752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.9"	""	"31.9"	""	"30.9"	""	"42.7"	"2.2"	"52.8"	"50.6"	""	"538"	"65"	"34.000"	"27.000"	"8.88694065389032E-06"	"21"	"0"	"7.993E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGSDVQQIAVTK"	"[R].iLGSDVQQIAVTk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.9315"	"0.0000"	"1"	"1"	"1"	"915.55865"	"1830.11003"	"1830.11007"	"-0.02"	"-0.00002"	"10/124"	"10"	"124"	"238530.712585449"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"54.9958"	"16913"	"16913"	"16885"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.5"	""	"26.6"	""	"28.9"	""	"34.6"	""	"40.4"	"46.5"	""	"537"	"73"	"34.000"	"27.000"	"1.50294916001437E-06"	"22"	"0"	"1.44E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGSDVQQIAVTK"	"[R].iLGSDVQQIAVTk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"610.70837"	"1830.11057"	"1830.11007"	"0.27"	"0.00017"	"10/124"	"10"	"124"	"11563740.206604"	"HCD"	"MS2"	"15.7416"	"187.5"	"63.649"	"54.7437"	"16809"	"16809"	"16789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"267.7"	""	"246.8"	""	"241.2"	""	"306.7"	"4.3"	"370.6"	"340.1"	""	"501"	"62"	"33.000"	"26.000"	"1.63609203438192E-05"	"22"	"0"	"1.281E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGSDVQQIAVTK"	"[R].iLGSDVQQIAVTk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"610.70850"	"1830.11094"	"1830.11007"	"0.47"	"0.00029"	"10/124"	"10"	"124"	"9696234.5894165"	"HCD"	"MS2"	"9.582171"	"237.5"	"97.911"	"54.5921"	"16694"	"16694"	"16672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.1"	""	"329.0"	""	"297.9"	""	"413.3"	"4.9"	"453.8"	"437.3"	""	"501"	"63"	"33.000"	"26.000"	"1.29660511403617E-05"	"22"	"0"	"2.262E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGSDVQQIAVTK"	"[R].iLGSDVQQIAVTk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.9457"	"0.0000"	"1"	"1"	"1"	"915.55963"	"1830.11199"	"1830.11007"	"1.05"	"0.00096"	"11/124"	"11"	"124"	"1650126.55871582"	"HCD"	"MS2"	"0"	"116.4"	"100.000"	"54.4884"	"16652"	"16652"	"16624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"179.3"	""	"158.2"	""	"134.6"	""	"211.0"	"0.3"	"228.0"	"191.5"	""	"492"	"92"	"33.000"	"26.000"	"1.43527495651341E-08"	"24"	"0"	"1.587E-06"	"1.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVPYVIVPLK"	"[K].sSVAVPYVIVPLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.4839"	"0.0000"	"1"	"1"	"1"	"610.72113"	"1830.14884"	"1830.15048"	"-0.90"	"-0.00055"	"13/98"	"13"	"98"	"13813014.0713501"	"HCD"	"MS2"	"22.50397"	"253.5"	"88.641"	"68.2300"	"22304"	"22304"	"22282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"489.2"	""	"444.0"	""	"322.1"	""	"395.9"	"0.7"	"355.4"	"385.1"	""	"274"	"31"	"31.000"	"24.000"	"0.0119047578812223"	""	"0"	"1.294E-05"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVPYVIVPLK"	"[K].sSVAVPYVIVPLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.57819"	"1830.14910"	"1830.15048"	"-0.76"	"-0.00069"	"15/98"	"15"	"98"	"5054404.65606689"	"HCD"	"MS2"	"22.35691"	"179.4"	"100.000"	"68.4663"	"22349"	"22349"	"22330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"369.9"	""	"270.3"	""	"198.2"	""	"307.9"	""	"253.3"	"294.9"	""	"272"	"52"	"31.000"	"24.000"	"8.13839769282036E-05"	"16"	"0"	"2.725E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVPYVIVPLK"	"[K].sSVAVPYVIVPLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"0.8864"	"0.0000"	"1"	"1"	"1"	"458.29282"	"1830.14943"	"1830.15048"	"-0.57"	"-0.00026"	"13/98"	"13"	"98"	"1587968.81622314"	"HCD"	"MS2"	"10.3107"	"43.8"	"100.000"	"68.5702"	"22392"	"22392"	"22362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.0"	""	"66.2"	""	"51.7"	""	"76.7"	""	"61.5"	"81.1"	""	"272"	"44"	"31.000"	"24.000"	"0.000499503928677395"	"20"	"0"	"2.278E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVPYVIVPLK"	"[K].sSVAVPYVIVPLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"458.29288"	"1830.14968"	"1830.15048"	"-0.44"	"-0.00020"	"9/98"	"9"	"98"	"850830.84979248"	"HCD"	"MS2"	"0"	"25.4"	"100.000"	"68.5252"	"22425"	"22425"	"22394"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.7"	""	"39.8"	""	"31.5"	""	"42.3"	""	"41.2"	"44.1"	""	"272"	"20"	"31.000"	"24.000"	"0.14013251238006"	"14"	"0.0001889"	"0.0004122"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVPYVIVPLK"	"[K].sSVAVPYVIVPLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.4828"	"0.0000"	"1"	"1"	"1"	"610.72156"	"1830.15012"	"1830.15048"	"-0.20"	"-0.00012"	"10/98"	"10"	"98"	"9741897.54205322"	"HCD"	"MS2"	"36.99028"	"207.7"	"100.000"	"68.3515"	"22302"	"22302"	"22282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"390.1"	""	"332.0"	""	"247.1"	""	"345.2"	"3.8"	"311.6"	"332.1"	""	"272"	"29"	"31.000"	"24.000"	"0.0183881868594422"	""	"0"	"2.005E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVPYVIVPLK"	"[K].sSVAVPYVIVPLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"915.57874"	"1830.15019"	"1830.15048"	"-0.16"	"-0.00014"	"14/98"	"14"	"98"	"850294.532531738"	"HCD"	"MS2"	"39.18999"	"43.8"	"100.000"	"68.6657"	"22482"	"22482"	"22458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.7"	""	"56.0"	""	"37.7"	""	"82.1"	"3.2"	"93.8"	"80.7"	""	"272"	"39"	"31.000"	"24.000"	"0.00164262681574522"	"19"	"0.0001889"	"0.0006432"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVPYVIVPLK"	"[K].sSVAVPYVIVPLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"610.72162"	"1830.15030"	"1830.15048"	"-0.10"	"-0.00006"	"11/98"	"11"	"98"	"22651923.1820068"	"HCD"	"MS2"	"4.010102"	"129.0"	"31.559"	"68.5300"	"22427"	"22427"	"22410"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"262.7"	""	"229.5"	""	"149.0"	""	"202.8"	""	"179.9"	"193.8"	""	"272"	"44"	"31.000"	"24.000"	"0.000508790400049992"	""	"0"	"2.428E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVPYVIVPLK"	"[K].sSVAVPYVIVPLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.57904"	"1830.15080"	"1830.15048"	"0.18"	"0.00016"	"9/98"	"9"	"98"	"4893526.48876953"	"HCD"	"MS2"	"27.7261"	"168.3"	"100.000"	"68.3154"	"22339"	"22339"	"22314"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"344.9"	""	"278.1"	""	"181.9"	""	"283.9"	"1.6"	"232.4"	"266.0"	""	"269"	"57"	"31.000"	"24.000"	"2.65290858007448E-05"	"16"	"0"	"1.134E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVAVPYVIVPLK"	"[K].sSVAVPYVIVPLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.5745"	"0.0000"	"1"	"1"	"1"	"610.72198"	"1830.15140"	"1830.15048"	"0.50"	"0.00031"	"12/98"	"12"	"98"	"26979574.2839355"	"HCD"	"MS2"	"4.64605"	"140.6"	"26.748"	"68.6557"	"22427"	"22427"	"22410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"291.6"	""	"237.2"	""	"166.4"	""	"221.4"	"1.9"	"188.9"	"218.8"	""	"266"	"47"	"31.000"	"24.000"	"0.000267825325231698"	""	"0"	"2.473E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.99487"	"1830.98247"	"1830.98327"	"-0.43"	"-0.00040"	"16/128"	"16"	"128"	"889325.919555664"	"HCD"	"MS2"	"29.14546"	"69.8"	"100.000"	"59.2353"	"18641"	"18641"	"18613"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.3"	""	"108.7"	""	"117.1"	""	"82.7"	""	"124.6"	"124.4"	""	"1154"	"19"	"37.000"	"30.000"	"0.701739322372955"	"14"	"0.0001889"	"0.0004089"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.99573"	"1830.98418"	"1830.98327"	"0.50"	"0.00046"	"16/128"	"16"	"128"	"1750052.19897461"	"HCD"	"MS2"	"68.89664"	"121.2"	"100.000"	"58.9822"	"18485"	"18485"	"18457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"137.9"	""	"189.4"	""	"206.8"	""	"162.5"	""	"207.2"	"245.7"	""	"1142"	"19"	"37.000"	"30.000"	"0.784577967732147"	"14"	"0.0002277"	"0.001167"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVHWGTPTAFQK"	"[R].tVHWGTPTAFQk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"611.01324"	"1831.02518"	"1831.02667"	"-0.82"	"-0.00050"	"8/104"	"8"	"104"	"19382182.8277588"	"HCD"	"MS2"	"12.01389"	"420.9"	"78.584"	"40.4321"	"10995"	"10995"	"10973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"414.0"	""	"422.7"	""	"367.4"	""	"768.5"	"4.5"	"995.7"	"1038.4"	""	"1066"	"45"	"37.000"	"30.000"	"0.00153718879116648"	"20"	"0"	"1.895E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVHWGTPTAFQK"	"[R].tVHWGTPTAFQk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.8730"	"0.0000"	"1"	"1"	"1"	"611.01373"	"1831.02665"	"1831.02667"	"-0.02"	"-0.00001"	"9/104"	"9"	"104"	"18596766.0271606"	"HCD"	"MS2"	"10.58908"	"514.5"	"96.996"	"40.2767"	"10887"	"10887"	"10869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"460.2"	""	"517.6"	""	"493.5"	""	"911.4"	"4.0"	"1218.9"	"1298.6"	""	"1040"	"63"	"37.000"	"30.000"	"2.4603865465997E-05"	"25"	"0"	"1.975E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTSPVSAMLVLVK"	"[R].qTSPVSAMLVLVk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35568"	"EGF-containing fibulin-like extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Efemp1 PE=1 SV=1"	"O35568"	"EGF-containing fibulin-like extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Efemp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.04138"	"1831.10959"	"1831.11271"	"-1.70"	"-0.00104"	"9/128"	"9"	"128"	"2304413.55859375"	"HCD"	"MS2"	"74.87611"	"64.3"	"100.000"	"71.8664"	"23737"	"23737"	"23715"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.4"	""	"87.5"	""	"87.6"	""	"88.6"	"0.1"	"118.4"	"135.1"	""	"482"	"23"	"33.000"	"26.000"	"0.125607925376324"	"14"	"0.0001308"	"0.0002869"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTSPVSAMLVLVK"	"[R].qTSPVSAMLVLVk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35568"	"EGF-containing fibulin-like extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Efemp1 PE=1 SV=1"	"O35568"	"EGF-containing fibulin-like extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Efemp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"611.04163"	"1831.11032"	"1831.11271"	"-1.30"	"-0.00080"	"12/128"	"12"	"128"	"2308799.49713135"	"HCD"	"MS2"	"46.97397"	"58.6"	"100.000"	"71.7957"	"23760"	"23760"	"23738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.8"	""	"78.8"	""	"80.8"	""	"88.2"	""	"114.2"	"117.5"	""	"478"	"33"	"33.000"	"26.000"	"0.0133474376542103"	"15"	"0"	"7.742E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYHLLKPMGK"	"[K].gYHLLkPMGk.[V]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"458.53574"	"1831.12111"	"1831.12311"	"-1.09"	"-0.00050"	"9/82"	"9"	"82"	"77736973.2211914"	"HCD"	"MS2"	"5.532691"	"483.4"	"13.873"	"35.9486"	"9115"	"9115"	"9099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"787.9"	""	"757.4"	""	"816.4"	""	"584.4"	"1.4"	"814.2"	"808.5"	""	"416"	"10"	"33.000"	"26.000"	"2.17802737994587"	"13"	"0.0001889"	"0.0009636"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYHLLKPMGK"	"[K].gYHLLkPMGk.[V]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"458.53610"	"1831.12258"	"1831.12311"	"-0.29"	"-0.00013"	"9/82"	"9"	"82"	"71988141.984375"	"HCD"	"MS2"	"19.9143"	"527.4"	"17.025"	"36.0356"	"9194"	"9194"	"9177"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"889.5"	""	"851.8"	""	"844.4"	""	"648.3"	"3.9"	"861.4"	"885.8"	""	"406"	"12"	"33.000"	"26.000"	"1.14946575674765"	"13"	"0.0001889"	"0.0005384"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIVVLGNSWK"	"[R].kIVVLGNSWk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.06372"	"1831.17661"	"1831.17725"	"-0.35"	"-0.00021"	"8/90"	"8"	"90"	"7105065.09033203"	"HCD"	"MS2"	"19.46058"	"395.4"	"100.000"	"47.4960"	"13871"	"13871"	"13842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"526.6"	""	"512.8"	""	"570.8"	""	"655.2"	"1.2"	"747.8"	"732.8"	""	"151"	"4"	"28.000"	"21.000"	"3.37246112073977"	"13"	"0.0001889"	"0.0008445"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48114"	"1831.95500"	"1831.96644"	"-6.24"	"-0.00572"	"17/116"	"17"	"116"	"1227402.06390381"	"HCD"	"MS2"	"0"	"79.2"	"100.000"	"67.5688"	"22034"	"22034"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.3"	""	"111.0"	""	"107.8"	""	"83.7"	""	"152.7"	"159.2"	""	"1025"	"23"	"37.000"	"30.000"	"0.246430166080486"	"14"	"0.00175"	"0.02462"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"611.32471"	"1831.95957"	"1831.96644"	"-3.75"	"-0.00229"	"12/116"	"12"	"116"	"2929807.77349854"	"HCD"	"MS2"	"53.86489"	"86.3"	"100.000"	"66.9454"	"21789"	"21789"	"21763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.1"	""	"133.3"	""	"130.0"	""	"101.0"	""	"167.0"	"168.1"	""	"1033"	"39"	"37.000"	"30.000"	"0.00657764341345105"	"23"	"0"	"7.53E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"611.32489"	"1831.96012"	"1831.96644"	"-3.45"	"-0.00211"	"10/116"	"10"	"116"	"2998934.45013428"	"HCD"	"MS2"	"0"	"80.2"	"100.000"	"67.2364"	"21900"	"21900"	"21888"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.8"	""	"133.3"	""	"120.1"	""	"90.5"	""	"162.0"	"143.9"	""	"1029"	"34"	"37.000"	"30.000"	"0.0215965997263373"	"22"	"0"	"4.849E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48395"	"1831.96062"	"1831.96644"	"-3.18"	"-0.00291"	"11/116"	"11"	"116"	"677795.099182129"	"HCD"	"MS2"	"0"	"59.3"	"100.000"	"67.8086"	"22081"	"22081"	"22058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.4"	""	"86.6"	""	"78.7"	""	"64.7"	""	"105.0"	"120.4"	""	"1031"	"55"	"37.000"	"30.000"	"0.000153542521937075"	"16"	"0.0001889"	"0.0007715"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"611.32526"	"1831.96122"	"1831.96644"	"-2.85"	"-0.00174"	"11/116"	"11"	"116"	"2734532.12243652"	"HCD"	"MS2"	"39.0779"	"78.5"	"100.000"	"67.6630"	"22073"	"22073"	"22042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.4"	""	"120.1"	""	"99.8"	""	"92.9"	""	"148.8"	"164.2"	""	"1044"	"27"	"37.000"	"30.000"	"0.103674154686055"	"15"	"0"	"0.00011"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"611.32544"	"1831.96177"	"1831.96644"	"-2.55"	"-0.00156"	"9/116"	"9"	"116"	"1627433.18438721"	"HCD"	"MS2"	"0"	"68.8"	"100.000"	"58.6276"	"18398"	"18398"	"18373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.3"	""	"102.0"	""	"102.8"	""	"90.2"	"0.9"	"135.2"	"124.8"	""	"1041"	"28"	"37.000"	"30.000"	"0.0759312822473319"	"21"	"0"	"0.0001583"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48462"	"1831.96196"	"1831.96644"	"-2.45"	"-0.00224"	"10/116"	"10"	"116"	"1093578.4574585"	"HCD"	"MS2"	"56.8567"	"86.4"	"100.000"	"68.1976"	"22291"	"22291"	"22266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.1"	""	"133.9"	""	"117.3"	""	"119.8"	"0.1"	"163.8"	"156.9"	""	"1042"	"2"	"37.000"	"30.000"	"30.891409410618"	"13"	"0.00423"	"0.1094"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.32574"	"1831.96268"	"1831.96644"	"-2.05"	"-0.00125"	"12/116"	"12"	"116"	"3049252.15228271"	"HCD"	"MS2"	"6.944313"	"106.1"	"100.000"	"66.5492"	"21627"	"21627"	"21603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.0"	""	"157.8"	""	"153.2"	""	"128.3"	""	"202.5"	"202.5"	""	"1050"	"26"	"37.000"	"30.000"	"0.137771473527683"	"14"	"0"	"9.712E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"916.48505"	"1831.96282"	"1831.96644"	"-1.98"	"-0.00181"	"19/116"	"19"	"116"	"639839.454772949"	"HCD"	"MS2"	"32.29763"	"56.8"	"100.000"	"66.3901"	"21562"	"21562"	"21539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.8"	""	"90.5"	""	"71.5"	""	"58.4"	"1.4"	"112.4"	"112.6"	""	"1051"	"59"	"37.000"	"30.000"	"6.57011120379412E-05"	"21"	"7.476E-05"	"0.0001906"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"611.32581"	"1831.96286"	"1831.96644"	"-1.95"	"-0.00119"	"10/116"	"10"	"116"	"1614247.58154297"	"HCD"	"MS2"	"0"	"54.8"	"100.000"	"67.1412"	"21815"	"21815"	"21798"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.8"	""	"77.3"	""	"89.0"	""	"67.3"	"0.6"	"96.6"	"108.2"	""	"1052"	"25"	"37.000"	"30.000"	"0.169038544332481"	"15"	"0.0001308"	"0.0002154"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.32587"	"1831.96305"	"1831.96644"	"-1.85"	"-0.00113"	"10/116"	"10"	"116"	"2742691.02252197"	"HCD"	"MS2"	"30.31265"	"76.0"	"100.000"	"67.7717"	"22066"	"22066"	"22042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.1"	""	"113.1"	""	"104.3"	""	"87.3"	""	"136.1"	"158.1"	""	"1052"	"21"	"37.000"	"30.000"	"0.44769860809445"	"14"	"0"	"0.0001624"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQEYFDGNLK"	"[R].fLQEYFDGNLk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"916.48523"	"1831.96318"	"1831.99946"	"-19.80"	"-0.01814"	"9/102"	"9"	"102"	"1443621.87438965"	"HCD"	"MS2"	"40.35279"	"134.5"	"100.000"	"69.7751"	"22935"	"22935"	"22913"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.1"	""	"199.3"	""	"182.4"	""	"150.1"	""	"264.7"	"257.4"	""	"1051"	"26"	"37.000"	"30.000"	"0.143738371567418"	"22"	"0.003197"	"0.06664"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQEYFDGNLK"	"[R].fLQEYFDGNLk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"916.48523"	"1831.96318"	"1831.99946"	"-19.80"	"-0.01814"	"10/102"	"10"	"102"	"6823883.5335083"	"HCD"	"MS2"	"49.53291"	"621.0"	"100.000"	"69.5139"	"22828"	"22828"	"22810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"854.7"	""	"850.2"	""	"849.2"	""	"899.6"	""	"1213.6"	"1241.7"	""	"1051"	"47"	"37.000"	"30.000"	"0.00101758974205394"	"25"	"0.0001308"	"0.0002228"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"611.32593"	"1831.96323"	"1831.96644"	"-1.75"	"-0.00107"	"10/116"	"10"	"116"	"6918759.71105957"	"HCD"	"MS2"	"43.51345"	"185.9"	"65.247"	"61.0579"	"19385"	"19385"	"19363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.2"	""	"276.3"	""	"281.7"	""	"190.8"	""	"341.4"	"360.8"	""	"1051"	"28"	"37.000"	"30.000"	"0.0925918412389311"	"22"	"0"	"0.0001059"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"611.32599"	"1831.96341"	"1831.96644"	"-1.65"	"-0.00101"	"12/116"	"12"	"116"	"3087466.33660889"	"HCD"	"MS2"	"15.548"	"101.1"	"100.000"	"66.3008"	"21473"	"21473"	"21449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.0"	""	"149.6"	""	"128.3"	""	"131.3"	"1.8"	"213.5"	"179.4"	""	"1051"	"32"	"37.000"	"30.000"	"0.0348796983496203"	"18"	"0"	"0.0001269"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"916.48535"	"1831.96343"	"1831.96644"	"-1.65"	"-0.00151"	"6/116"	"6"	"116"	"584299.179382324"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"70.0719"	"23056"	"23056"	"23034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.0"	""	"88.7"	""	"77.6"	""	"65.8"	""	"118.9"	"112.6"	""	"1051"	"2"	"37.000"	"30.000"	"32.2531933714099"	"13"	"0.004346"	"0.125"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"611.32605"	"1831.96360"	"1831.96644"	"-1.55"	"-0.00095"	"11/116"	"11"	"116"	"4734254.16693115"	"HCD"	"MS2"	"23.2131"	"146.3"	"100.000"	"60.2048"	"19037"	"19037"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.7"	""	"214.3"	""	"237.1"	""	"187.1"	"1.0"	"261.6"	"276.3"	""	"1048"	"36"	"37.000"	"30.000"	"0.0130116174717488"	"20"	"7.476E-05"	"0.0001906"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48547"	"1831.96367"	"1831.96644"	"-1.51"	"-0.00139"	"10/116"	"10"	"116"	"898201.290222168"	"HCD"	"MS2"	"0"	"75.6"	"100.000"	"60.2162"	"19042"	"19042"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.2"	""	"117.8"	""	"110.1"	""	"95.8"	""	"134.5"	"136.8"	""	"1052"	"42"	"37.000"	"30.000"	"0.00327329949998978"	"15"	"0.0004166"	"0.0023"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"3"	"611.32611"	"1831.96378"	"1831.96644"	"-1.45"	"-0.00089"	"7/116"	"7"	"116"	"2658038.87390137"	"HCD"	"MS2"	"22.63472"	"74.8"	"100.000"	"70.5510"	"23200"	"23200"	"23171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.8"	""	"128.4"	""	"107.1"	""	"88.4"	""	"132.7"	"141.8"	""	"1051"	"6"	"37.000"	"30.000"	"14.5402783466375"	"15"	"0.004913"	"0.1487"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"916.48553"	"1831.96379"	"1831.96644"	"-1.45"	"-0.00132"	"11/116"	"11"	"116"	"401232.145019531"	"HCD"	"MS2"	"0"	"37.6"	"100.000"	"69.0315"	"22580"	"22580"	"22554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.5"	""	"61.1"	""	"47.2"	""	"42.9"	""	"71.2"	"76.3"	""	"1051"	"27"	"37.000"	"30.000"	"0.0940963376295547"	"15"	"0.0003839"	"0.00177"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9836"	"0.0000"	"1"	"1"	"1"	"916.48560"	"1831.96391"	"1831.96644"	"-1.38"	"-0.00126"	"11/116"	"11"	"116"	"903700.804504395"	"HCD"	"MS2"	"0"	"71.2"	"100.000"	"62.7505"	"20076"	"20076"	"20051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.7"	""	"120.4"	""	"92.9"	""	"61.7"	""	"129.7"	"139.3"	""	"1050"	"61"	"37.000"	"30.000"	"3.86508726184737E-05"	"17"	"0.0001308"	"0.0002086"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.32617"	"1831.96396"	"1831.96644"	"-1.35"	"-0.00083"	"10/116"	"10"	"116"	"3855975.9072876"	"HCD"	"MS2"	"35.36044"	"97.7"	"100.000"	"65.8084"	"21325"	"21325"	"21299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.3"	""	"136.5"	""	"142.2"	""	"116.7"	""	"192.8"	"196.8"	""	"1050"	"19"	"37.000"	"30.000"	"0.613987180285433"	"14"	"0.0001308"	"0.0003066"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48566"	"1831.96404"	"1831.96644"	"-1.31"	"-0.00120"	"10/116"	"10"	"116"	"548377.009521484"	"HCD"	"MS2"	"0"	"52.4"	"100.000"	"59.7654"	"18804"	"18804"	"18777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.5"	""	"82.6"	""	"72.5"	""	"44.4"	""	"103.2"	"109.0"	""	"1050"	"38"	"37.000"	"30.000"	"0.00845588958468592"	"15"	"0.0005564"	"0.003613"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"916.48578"	"1831.96428"	"1831.96644"	"-1.18"	"-0.00108"	"13/116"	"13"	"116"	"206070.126586914"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"58.3508"	"18231"	"18231"	"18203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.9"	""	"29.9"	""	"32.4"	""	"27.0"	"2.1"	"47.7"	"40.9"	""	"1044"	"36"	"37.000"	"30.000"	"0.0137933737132205"	"16"	"0.000523"	"0.003122"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"916.48578"	"1831.96428"	"1831.96644"	"-1.18"	"-0.00108"	"11/116"	"11"	"116"	"845411.744812012"	"HCD"	"MS2"	"0"	"71.0"	"100.000"	"62.3394"	"19855"	"19855"	"19833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.2"	""	"109.3"	""	"89.4"	""	"75.3"	"1.6"	"127.5"	"134.6"	""	"1044"	"64"	"37.000"	"30.000"	"1.93941389588724E-05"	"21"	"0.0001889"	"0.0004015"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"916.48578"	"1831.96428"	"1831.96644"	"-1.18"	"-0.00108"	"11/116"	"11"	"116"	"723260.988952637"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"66.0551"	"21426"	"21426"	"21395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.0"	""	"92.6"	""	"81.5"	""	"53.0"	""	"115.1"	"108.9"	""	"1044"	"60"	"37.000"	"30.000"	"4.74974728314035E-05"	"18"	"0.0001889"	"0.0005688"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"916.48584"	"1831.96440"	"1831.96644"	"-1.11"	"-0.00102"	"15/116"	"15"	"116"	"504794.68737793"	"HCD"	"MS2"	"0"	"47.0"	"100.000"	"69.3498"	"22710"	"22710"	"22682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.6"	""	"77.3"	""	"60.5"	""	"53.3"	"1.8"	"78.4"	"88.4"	""	"1052"	"48"	"37.000"	"30.000"	"0.000903619811644893"	"16"	"0.0001889"	"0.001038"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.32635"	"1831.96451"	"1831.96644"	"-1.05"	"-0.00064"	"12/116"	"12"	"116"	"4170277.25836182"	"HCD"	"MS2"	"1.272302"	"122.9"	"100.000"	"63.6421"	"20440"	"20440"	"20419"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.0"	""	"193.7"	""	"171.6"	""	"140.6"	""	"233.3"	"246.9"	""	"1052"	"27"	"37.000"	"30.000"	"0.108139845348766"	"14"	"0"	"6.455E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"611.32635"	"1831.96451"	"1831.96644"	"-1.05"	"-0.00064"	"11/116"	"11"	"116"	"5515698.98071289"	"HCD"	"MS2"	"22.60013"	"151.0"	"100.000"	"61.9895"	"19765"	"19765"	"19747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.5"	""	"233.7"	""	"205.6"	""	"148.3"	""	"258.3"	"331.5"	""	"1052"	"37"	"37.000"	"30.000"	"0.0102561825947273"	"23"	"0"	"4.964E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"916.48590"	"1831.96453"	"1831.96644"	"-1.05"	"-0.00096"	"16/116"	"16"	"116"	"433926.438964844"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"69.1708"	"22688"	"22688"	"22666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.0"	""	"70.6"	""	"53.2"	""	"34.5"	""	"74.3"	"77.4"	""	"1052"	"42"	"37.000"	"30.000"	"0.00335726593736229"	"16"	"0.0004557"	"0.002597"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48590"	"1831.96453"	"1831.96644"	"-1.05"	"-0.00096"	"15/116"	"15"	"116"	"645153.88067627"	"HCD"	"MS2"	"0"	"56.1"	"100.000"	"66.6584"	"21619"	"21619"	"21593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.9"	""	"83.6"	""	"71.8"	""	"58.5"	""	"111.8"	"107.3"	""	"1052"	"34"	"37.000"	"30.000"	"0.0224898078115735"	"15"	"0.0003839"	"0.001565"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48590"	"1831.96453"	"1831.96644"	"-1.05"	"-0.00096"	"11/116"	"11"	"116"	"735705.655395508"	"HCD"	"MS2"	"0"	"57.8"	"100.000"	"66.7038"	"21690"	"21690"	"21667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.6"	""	"89.6"	""	"74.6"	""	"67.6"	"0.6"	"104.1"	"107.0"	""	"1052"	"50"	"37.000"	"30.000"	"0.000579409676818785"	"16"	"0.0001889"	"0.0005672"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"611.32642"	"1831.96469"	"1831.96644"	"-0.95"	"-0.00058"	"10/116"	"10"	"116"	"1609786.04193115"	"HCD"	"MS2"	"0"	"67.6"	"100.000"	"58.5827"	"18326"	"18326"	"18297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.5"	""	"105.9"	""	"91.3"	""	"88.5"	"0.3"	"115.3"	"133.6"	""	"1052"	"38"	"37.000"	"30.000"	"0.00909883404947145"	"21"	"0"	"6.791E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"611.32642"	"1831.96469"	"1831.96644"	"-0.95"	"-0.00058"	"9/116"	"9"	"116"	"2728844.94158936"	"HCD"	"MS2"	"48.87705"	"73.6"	"100.000"	"68.9738"	"22556"	"22556"	"22538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.0"	""	"110.2"	""	"106.0"	""	"92.0"	""	"125.8"	"144.6"	""	"1052"	"28"	"37.000"	"30.000"	"0.0790652674163352"	"21"	"0"	"7.121E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"611.32642"	"1831.96469"	"1831.96644"	"-0.95"	"-0.00058"	"9/116"	"9"	"116"	"5118225.02032471"	"HCD"	"MS2"	"36.15797"	"142.2"	"100.000"	"65.4052"	"21160"	"21160"	"21139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"217.6"	""	"202.8"	""	"191.2"	""	"186.8"	""	"271.5"	"279.4"	""	"1052"	"35"	"37.000"	"30.000"	"0.015240027271309"	"23"	"0.0001308"	"0.000208"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"916.48602"	"1831.96477"	"1831.96644"	"-0.91"	"-0.00084"	"18/116"	"18"	"116"	"720260.604675293"	"HCD"	"MS2"	"0"	"62.4"	"100.000"	"66.3423"	"21490"	"21490"	"21465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.8"	""	"92.1"	""	"90.2"	""	"66.8"	""	"122.4"	"112.5"	""	"1052"	"47"	"37.000"	"30.000"	"0.0010162153347509"	"22"	"0.0001889"	"0.0007514"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48608"	"1831.96489"	"1831.96644"	"-0.85"	"-0.00078"	"9/116"	"9"	"116"	"942442.72857666"	"HCD"	"MS2"	"12.88188"	"75.9"	"100.000"	"65.7201"	"21236"	"21236"	"21209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.6"	""	"127.1"	""	"107.6"	""	"72.0"	""	"138.9"	"152.1"	""	"1051"	"31"	"37.000"	"30.000"	"0.0384213588370536"	"14"	"0.00103"	"0.01266"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9683"	"0.0000"	"1"	"1"	"1"	"916.48608"	"1831.96489"	"1831.96644"	"-0.85"	"-0.00078"	"11/116"	"11"	"116"	"1064955.57202148"	"HCD"	"MS2"	"0"	"87.2"	"100.000"	"61.9941"	"19714"	"19714"	"19689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.1"	""	"146.4"	""	"119.1"	""	"76.6"	"0.7"	"161.6"	"165.3"	""	"1051"	"63"	"37.000"	"30.000"	"2.73257896178362E-05"	"18"	"0"	"0.0001423"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"916.48608"	"1831.96489"	"1831.96644"	"-0.85"	"-0.00078"	"10/116"	"10"	"116"	"1086712.98394775"	"HCD"	"MS2"	"0"	"89.4"	"100.000"	"62.1164"	"19817"	"19817"	"19795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.9"	""	"149.7"	""	"115.6"	""	"94.4"	""	"172.8"	"167.7"	""	"1051"	"34"	"37.000"	"30.000"	"0.020350389240631"	"15"	"0.0003146"	"0.001476"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"916.48608"	"1831.96489"	"1831.96644"	"-0.85"	"-0.00078"	"11/116"	"11"	"116"	"3959180.44232178"	"HCD"	"MS2"	"0"	"291.5"	"100.000"	"56.3432"	"17410"	"17410"	"17387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"438.7"	""	"410.7"	""	"361.7"	""	"552.8"	"2.8"	"527.0"	"465.4"	""	"1051"	"62"	"37.000"	"30.000"	"3.38510949028226E-05"	"19"	"0.0001889"	"0.0004423"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"611.32648"	"1831.96488"	"1831.96644"	"-0.85"	"-0.00052"	"11/116"	"11"	"116"	"3564327.56890869"	"HCD"	"MS2"	"4.852354"	"92.3"	"100.000"	"63.9087"	"20496"	"20496"	"20473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.4"	""	"141.0"	""	"135.3"	""	"90.9"	"1.8"	"174.6"	"171.8"	""	"1051"	"42"	"37.000"	"30.000"	"0.00335407461993133"	"22"	"0"	"5.462E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"611.32648"	"1831.96488"	"1831.96644"	"-0.85"	"-0.00052"	"11/116"	"11"	"116"	"3867461.24298096"	"HCD"	"MS2"	"5.665891"	"107.7"	"100.000"	"64.0384"	"20602"	"20602"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.3"	""	"164.8"	""	"157.5"	""	"115.0"	"2.3"	"200.0"	"209.2"	""	"1051"	"54"	"37.000"	"30.000"	"0.000191237351484847"	"25"	"0"	"6.388E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7805"	"0.0000"	"1"	"1"	"1"	"611.32648"	"1831.96488"	"1831.96644"	"-0.85"	"-0.00052"	"10/116"	"10"	"116"	"3169295.73431396"	"HCD"	"MS2"	"59.5332"	"122.2"	"100.000"	"59.7516"	"18852"	"18852"	"18821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.7"	""	"151.5"	""	"154.5"	""	"168.3"	""	"251.7"	"257.0"	""	"1051"	"41"	"37.000"	"30.000"	"0.00386876829733484"	"24"	"0"	"7.021E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48615"	"1831.96501"	"1831.96644"	"-0.78"	"-0.00071"	"10/116"	"10"	"116"	"694077.759155273"	"HCD"	"MS2"	"14.11201"	"61.1"	"100.000"	"66.0330"	"21364"	"21364"	"21337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.0"	""	"98.1"	""	"87.2"	""	"52.6"	"1.2"	"126.5"	"112.4"	""	"1054"	"37"	"37.000"	"30.000"	"0.0101346934113565"	"15"	"0.0005564"	"0.003467"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7556"	"0.0000"	"1"	"1"	"1"	"611.32654"	"1831.96506"	"1831.96644"	"-0.75"	"-0.00046"	"8/116"	"8"	"116"	"4396501.80566406"	"HCD"	"MS2"	"5.774474"	"110.4"	"100.000"	"62.6610"	"20039"	"20039"	"20019"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.4"	""	"171.4"	""	"143.4"	""	"123.3"	""	"203.1"	"217.6"	""	"1054"	"45"	"37.000"	"30.000"	"0.00180223166204725"	"26"	"0"	"1.452E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7708"	"0.0000"	"1"	"1"	"1"	"611.32654"	"1831.96506"	"1831.96644"	"-0.75"	"-0.00046"	"11/116"	"11"	"116"	"4692937.41809082"	"HCD"	"MS2"	"8.012224"	"117.8"	"100.000"	"62.3123"	"19897"	"19897"	"19875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.9"	""	"185.7"	""	"166.3"	""	"126.9"	"3.1"	"212.2"	"227.4"	""	"1054"	"48"	"37.000"	"30.000"	"0.000818107954247908"	"26"	"0"	"2.904E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48621"	"1831.96514"	"1831.96644"	"-0.71"	"-0.00065"	"15/116"	"15"	"116"	"1122575.37091064"	"HCD"	"MS2"	"23.8789"	"84.4"	"100.000"	"59.1224"	"18595"	"18595"	"18565"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.1"	""	"135.5"	""	"131.7"	""	"110.2"	""	"146.6"	"158.8"	""	"1054"	"10"	"37.000"	"30.000"	"5.64690673860218"	"13"	"0.0009404"	"0.009897"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"611.32660"	"1831.96524"	"1831.96644"	"-0.65"	"-0.00040"	"9/116"	"9"	"116"	"2818749.66143799"	"HCD"	"MS2"	"41.32714"	"84.8"	"100.000"	"67.2672"	"21866"	"21866"	"21843"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.2"	""	"124.3"	""	"121.6"	""	"111.2"	"0.1"	"148.2"	"162.9"	""	"1054"	"32"	"37.000"	"30.000"	"0.0337140258299355"	"22"	"0"	"3.874E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"916.48627"	"1831.96526"	"1831.96644"	"-0.65"	"-0.00059"	"15/116"	"15"	"116"	"561133.297424316"	"HCD"	"MS2"	"100"	"50.5"	"100.000"	"67.2683"	"21913"	"21913"	"21896"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.5"	""	"71.5"	""	"76.8"	""	"53.4"	""	"100.1"	"92.6"	""	"1054"	"24"	"37.000"	"30.000"	"0.230043843590567"	"15"	"0.00103"	"0.01208"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.32666"	"1831.96543"	"1831.96644"	"-0.55"	"-0.00034"	"12/116"	"12"	"116"	"3405195.14337158"	"HCD"	"MS2"	"0"	"96.6"	"100.000"	"62.8026"	"20044"	"20044"	"20025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.8"	""	"163.9"	""	"131.3"	""	"98.2"	""	"173.6"	"186.7"	""	"1054"	"29"	"37.000"	"30.000"	"0.0600911638044736"	"15"	"0"	"6.224E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"611.32666"	"1831.96543"	"1831.96644"	"-0.55"	"-0.00034"	"10/116"	"10"	"116"	"4449134.50946045"	"HCD"	"MS2"	"3.930008"	"110.7"	"100.000"	"62.1872"	"19793"	"19793"	"19769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.6"	""	"170.2"	""	"147.9"	""	"117.1"	""	"208.2"	"228.2"	""	"1054"	"47"	"37.000"	"30.000"	"0.00112670602116768"	"22"	"0"	"6.321E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"611.32666"	"1831.96543"	"1831.96644"	"-0.55"	"-0.00034"	"11/116"	"11"	"116"	"3581750.42895508"	"HCD"	"MS2"	"15.99793"	"114.3"	"100.000"	"66.6100"	"21599"	"21599"	"21577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.9"	""	"169.3"	""	"170.3"	""	"130.5"	""	"222.4"	"207.9"	""	"1054"	"33"	"37.000"	"30.000"	"0.0255747039585438"	"23"	"0"	"0.0001127"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48639"	"1831.96550"	"1831.96644"	"-0.51"	"-0.00047"	"9/116"	"9"	"116"	"507491.911499023"	"HCD"	"MS2"	"10.31142"	"49.1"	"100.000"	"59.5168"	"18756"	"18756"	"18725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.9"	""	"85.1"	""	"66.7"	""	"54.1"	""	"92.2"	"92.7"	""	"1046"	"35"	"37.000"	"30.000"	"0.0158307572289698"	"15"	"0.00109"	"0.01476"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"916.48639"	"1831.96550"	"1831.96644"	"-0.51"	"-0.00047"	"19/116"	"19"	"116"	"777223.124023438"	"HCD"	"MS2"	"0"	"66.8"	"100.000"	"63.6881"	"20459"	"20459"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.2"	""	"111.5"	""	"88.8"	""	"57.3"	"2.0"	"130.8"	"124.5"	""	"1046"	"55"	"37.000"	"30.000"	"0.00016962961987371"	"20"	"7.476E-05"	"0.000191"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"611.32672"	"1831.96561"	"1831.96644"	"-0.45"	"-0.00028"	"10/116"	"10"	"116"	"1449048.77246094"	"HCD"	"MS2"	"19.47829"	"70.5"	"100.000"	"58.1166"	"18135"	"18135"	"18107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.4"	""	"96.8"	""	"106.2"	""	"110.2"	"0.6"	"144.4"	"124.5"	""	"1046"	"25"	"37.000"	"30.000"	"0.1826003849953"	"22"	"7.476E-05"	"0.0001995"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"611.32672"	"1831.96561"	"1831.96644"	"-0.45"	"-0.00028"	"12/116"	"12"	"116"	"5590758.50341797"	"HCD"	"MS2"	"43.90759"	"133.6"	"100.000"	"67.9970"	"22209"	"22209"	"22186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.2"	""	"190.3"	""	"172.8"	""	"180.9"	"0.9"	"252.8"	"272.1"	""	"1046"	"20"	"37.000"	"30.000"	"0.470437235140208"	"15"	"0.0001889"	"0.0003974"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48645"	"1831.96562"	"1831.96644"	"-0.45"	"-0.00041"	"8/116"	"8"	"116"	"517935.888977051"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"59.8918"	"18909"	"18909"	"18884"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.6"	""	"73.7"	""	"59.3"	""	"37.6"	"4.2"	"86.7"	"87.8"	""	"1046"	"54"	"37.000"	"30.000"	"0.000196110880174388"	"16"	"0.0001889"	"0.0004264"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"916.48645"	"1831.96562"	"1831.96644"	"-0.45"	"-0.00041"	"11/116"	"11"	"116"	"815173.937805176"	"HCD"	"MS2"	"0"	"66.3"	"100.000"	"63.3813"	"20334"	"20334"	"20307"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.5"	""	"98.7"	""	"92.8"	""	"68.7"	"2.3"	"127.3"	"121.0"	""	"1046"	"64"	"37.000"	"30.000"	"2.19533948627297E-05"	"23"	"0.0001308"	"0.0002236"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48645"	"1831.96562"	"1831.96644"	"-0.45"	"-0.00041"	"10/116"	"10"	"116"	"1254323.27563477"	"HCD"	"MS2"	"0"	"104.2"	"100.000"	"61.3672"	"19458"	"19458"	"19433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.5"	""	"154.3"	""	"126.0"	""	"138.7"	"3.4"	"196.3"	"201.1"	""	"1046"	"61"	"37.000"	"30.000"	"4.57616514443949E-05"	"17"	"0.0001859"	"0.0003544"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"916.48651"	"1831.96575"	"1831.96644"	"-0.38"	"-0.00035"	"11/116"	"11"	"116"	"972224.21282959"	"HCD"	"MS2"	"0"	"75.0"	"100.000"	"62.4300"	"19945"	"19945"	"19923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.9"	""	"117.9"	""	"93.8"	""	"81.4"	"2.4"	"143.8"	"127.5"	""	"1046"	"52"	"37.000"	"30.000"	"0.000300262909734433"	"18"	"0.0001308"	"0.0002725"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48657"	"1831.96587"	"1831.96644"	"-0.31"	"-0.00029"	"10/116"	"10"	"116"	"513612.806640625"	"HCD"	"MS2"	"25.82831"	"41.4"	"100.000"	"68.7926"	"22534"	"22534"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.2"	""	"60.8"	""	"60.5"	""	"43.2"	""	"75.5"	"83.0"	""	"1056"	"33"	"37.000"	"30.000"	"0.0237483763383656"	"15"	"0.0003839"	"0.001915"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"916.48657"	"1831.96587"	"1831.96644"	"-0.31"	"-0.00029"	"11/116"	"11"	"116"	"747209.817138672"	"HCD"	"MS2"	"0"	"66.0"	"100.000"	"63.6368"	"20385"	"20385"	"20361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.8"	""	"107.1"	""	"94.4"	""	"64.1"	"1.6"	"121.9"	"114.3"	""	"1056"	"61"	"37.000"	"30.000"	"3.94124944440515E-05"	"22"	"0.0001889"	"0.0008982"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"611.32684"	"1831.96598"	"1831.96644"	"-0.25"	"-0.00016"	"12/116"	"12"	"116"	"2776674.20135498"	"HCD"	"MS2"	"45.37834"	"80.2"	"100.000"	"68.8596"	"22561"	"22561"	"22538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.3"	""	"129.3"	""	"109.8"	""	"92.9"	"1.9"	"146.2"	"152.8"	""	"1055"	"23"	"37.000"	"30.000"	"0.270534380055445"	"18"	"0"	"0.0001181"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"611.32684"	"1831.96598"	"1831.96644"	"-0.25"	"-0.00016"	"9/116"	"9"	"116"	"4752952.16516113"	"HCD"	"MS2"	"35.03158"	"135.6"	"100.000"	"60.4242"	"19073"	"19073"	"19049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.1"	""	"205.7"	""	"244.7"	""	"152.7"	""	"222.5"	"240.6"	""	"1055"	"37"	"37.000"	"30.000"	"0.0113298057510386"	"22"	"0"	"6.304E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"916.48663"	"1831.96599"	"1831.96644"	"-0.25"	"-0.00023"	"9/116"	"9"	"116"	"850891.862670898"	"HCD"	"MS2"	"0"	"70.2"	"100.000"	"65.7280"	"21292"	"21292"	"21267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.1"	""	"95.6"	""	"89.7"	""	"70.7"	"4.4"	"124.4"	"142.9"	""	"1055"	"48"	"37.000"	"30.000"	"0.000805791095720584"	"16"	"0.0001889"	"0.0007797"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"916.48663"	"1831.96599"	"1831.96644"	"-0.25"	"-0.00023"	"11/116"	"11"	"116"	"3226066.87634277"	"HCD"	"MS2"	"0"	"236.5"	"100.000"	"56.5392"	"17544"	"17544"	"17525"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"357.9"	""	"330.1"	""	"308.7"	""	"451.8"	"0.4"	"407.9"	"380.6"	""	"1055"	"62"	"37.000"	"30.000"	"3.42154663696696E-05"	"19"	"0"	"5.328E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQEYFDGNLK"	"[R].fLQEYFDGNLk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"916.48663"	"1831.96599"	"1831.99946"	"-18.27"	"-0.01673"	"9/102"	"9"	"102"	"7404078.7612915"	"HCD"	"MS2"	"32.25859"	"692.3"	"100.000"	"69.6469"	"22831"	"22831"	"22810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1020.3"	""	"955.3"	""	"934.4"	""	"966.5"	"13.8"	"1309.3"	"1363.1"	""	"1055"	"55"	"37.000"	"30.000"	"0.000179979260880567"	"24"	"0"	"0.0001197"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.32690"	"1831.96616"	"1831.96644"	"-0.15"	"-0.00009"	"11/116"	"11"	"116"	"3835441.23187256"	"HCD"	"MS2"	"0"	"111.6"	"100.000"	"63.5931"	"20367"	"20367"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.3"	""	"166.3"	""	"170.3"	""	"128.0"	"0.3"	"210.7"	"209.8"	""	"1057"	"23"	"37.000"	"30.000"	"0.240461189789301"	"14"	"0"	"7.642E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7556"	"0.0000"	"1"	"1"	"1"	"611.32690"	"1831.96616"	"1831.96644"	"-0.15"	"-0.00009"	"8/116"	"8"	"116"	"14783487.2935791"	"HCD"	"MS2"	"6.011401"	"183.7"	"49.040"	"56.8461"	"17670"	"17670"	"17653"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"253.3"	""	"241.8"	""	"247.6"	""	"344.8"	"1.7"	"342.8"	"307.8"	""	"1057"	"45"	"37.000"	"30.000"	"0.00166741994345349"	"26"	"0"	"2.987E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"611.32690"	"1831.96616"	"1831.96644"	"-0.15"	"-0.00009"	"8/116"	"8"	"116"	"12973440.3845215"	"HCD"	"MS2"	"9.445145"	"264.7"	"77.251"	"56.6802"	"17548"	"17548"	"17531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"354.6"	""	"371.0"	""	"346.6"	""	"492.2"	""	"505.6"	"438.9"	""	"1057"	"44"	"37.000"	"30.000"	"0.00222866602062006"	"25"	"0"	"4.504E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"611.32690"	"1831.96616"	"1831.96644"	"-0.15"	"-0.00009"	"9/116"	"9"	"116"	"5656233.0244751"	"HCD"	"MS2"	"14.65066"	"153.8"	"100.000"	"61.1939"	"19387"	"19387"	"19369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"263.0"	""	"219.5"	""	"220.4"	""	"200.4"	""	"277.6"	"276.8"	""	"1057"	"36"	"37.000"	"30.000"	"0.0124178094581833"	"24"	"0"	"2.53E-05"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"611.32690"	"1831.96616"	"1831.96644"	"-0.15"	"-0.00009"	"8/116"	"8"	"116"	"14287126.3275146"	"HCD"	"MS2"	"36.93741"	"382.0"	"100.000"	"56.5369"	"17543"	"17543"	"17525"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"568.0"	""	"556.2"	""	"522.7"	""	"661.0"	"2.5"	"677.5"	"627.4"	""	"1057"	"46"	"37.000"	"30.000"	"0.00131839331318935"	"27"	"0"	"8.329E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48676"	"1831.96623"	"1831.96644"	"-0.11"	"-0.00010"	"7/116"	"7"	"116"	"374106.978637695"	"HCD"	"MS2"	"7.960506"	"40.0"	"100.000"	"70.4219"	"23147"	"23147"	"23123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.3"	""	"61.0"	""	"54.2"	""	"45.2"	""	"69.2"	"73.3"	""	"1061"	"1"	"37.000"	"30.000"	"39.3265083010137"	"13"	"0.002456"	"0.03662"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9828"	"0.0000"	"1"	"1"	"1"	"916.48676"	"1831.96623"	"1831.96644"	"-0.11"	"-0.00010"	"17/116"	"17"	"116"	"800340.991088867"	"HCD"	"MS2"	"0"	"71.2"	"100.000"	"63.0054"	"20127"	"20127"	"20105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.2"	""	"118.3"	""	"98.1"	""	"62.7"	"2.3"	"135.7"	"137.3"	""	"1061"	"58"	"37.000"	"30.000"	"7.59775680564616E-05"	"17"	"0.0001889"	"0.0004372"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48682"	"1831.96636"	"1831.96644"	"-0.05"	"-0.00004"	"14/116"	"14"	"116"	"1035451.79681396"	"HCD"	"MS2"	"35.48071"	"81.0"	"100.000"	"65.3972"	"21104"	"21104"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.8"	""	"123.3"	""	"107.2"	""	"79.6"	""	"166.6"	"162.5"	""	"1057"	"14"	"37.000"	"30.000"	"2.19303211532261"	"14"	"0.000523"	"0.003072"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9841"	"0.0000"	"1"	"1"	"1"	"916.48688"	"1831.96648"	"1831.96644"	"0.02"	"0.00002"	"11/116"	"11"	"116"	"827019.573242188"	"HCD"	"MS2"	"0"	"72.1"	"100.000"	"63.0685"	"20206"	"20206"	"20179"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.3"	""	"119.5"	""	"90.6"	""	"78.0"	"0.5"	"129.7"	"131.7"	""	"1055"	"63"	"37.000"	"30.000"	"2.47299059081627E-05"	"18"	"0.0001889"	"0.0006884"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"916.48688"	"1831.96648"	"1831.96644"	"0.02"	"0.00002"	"11/116"	"11"	"116"	"4935414.47589111"	"HCD"	"MS2"	"0"	"333.1"	"100.000"	"57.1639"	"17799"	"17799"	"17781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"478.1"	""	"456.2"	""	"463.9"	""	"586.2"	"0.3"	"609.1"	"560.4"	""	"1055"	"62"	"37.000"	"30.000"	"3.31300784274025E-05"	"23"	"0"	"3.784E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"611.32703"	"1831.96653"	"1831.96644"	"0.05"	"0.00003"	"9/116"	"9"	"116"	"1842055.87524414"	"HCD"	"MS2"	"0"	"72.0"	"100.000"	"58.1704"	"18211"	"18211"	"18181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.2"	""	"105.7"	""	"106.1"	""	"103.5"	""	"136.5"	"130.2"	""	"1055"	"27"	"37.000"	"30.000"	"0.0979991850060871"	"22"	"0"	"0.0001527"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7708"	"0.0000"	"1"	"1"	"1"	"611.32703"	"1831.96653"	"1831.96644"	"0.05"	"0.00003"	"9/116"	"9"	"116"	"26434180.291748"	"HCD"	"MS2"	"3.915687"	"189.2"	"32.217"	"57.1594"	"17798"	"17798"	"17781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"256.6"	""	"256.6"	""	"261.4"	""	"338.5"	"0.1"	"347.3"	"331.6"	""	"1055"	"48"	"37.000"	"30.000"	"0.000776644845033259"	"26"	"0"	"4.165E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48694"	"1831.96660"	"1831.96644"	"0.09"	"0.00008"	"16/116"	"16"	"116"	"846543.633544922"	"HCD"	"MS2"	"24.15002"	"73.1"	"100.000"	"60.4288"	"19075"	"19075"	"19049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.6"	""	"119.8"	""	"102.4"	""	"73.3"	""	"128.6"	"145.6"	""	"1055"	"37"	"37.000"	"30.000"	"0.0104045299330059"	"15"	"0.0003839"	"0.001782"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9672"	"0.0000"	"1"	"1"	"1"	"916.48694"	"1831.96660"	"1831.96644"	"0.09"	"0.00008"	"11/116"	"11"	"116"	"2714913.71850586"	"HCD"	"MS2"	"3.310365"	"199.3"	"100.000"	"56.8528"	"17672"	"17672"	"17653"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"297.6"	""	"293.9"	""	"252.0"	""	"359.6"	"3.5"	"362.7"	"317.1"	""	"1055"	"61"	"37.000"	"30.000"	"4.45884590822053E-05"	"18"	"0"	"3.277E-05"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"611.32709"	"1831.96671"	"1831.96644"	"0.15"	"0.00009"	"8/116"	"8"	"116"	"19482556.3894043"	"HCD"	"MS2"	"4.473841"	"153.8"	"30.781"	"56.9929"	"17676"	"17676"	"17659"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.0"	""	"219.6"	""	"216.7"	""	"254.6"	"1.9"	"284.6"	"252.4"	""	"1055"	"40"	"37.000"	"30.000"	"0.00517872039943042"	"21"	"0"	"3.206E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.32709"	"1831.96671"	"1831.96644"	"0.15"	"0.00009"	"12/116"	"12"	"116"	"4385228.3894043"	"HCD"	"MS2"	"40.80576"	"118.5"	"100.000"	"68.0791"	"22191"	"22191"	"22170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.1"	""	"180.8"	""	"158.7"	""	"151.0"	""	"232.2"	"234.4"	""	"1055"	"22"	"37.000"	"30.000"	"0.331300784274025"	"14"	"0"	"0.0001796"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"611.32709"	"1831.96671"	"1831.96644"	"0.15"	"0.00009"	"11/116"	"11"	"116"	"6478161.43713379"	"HCD"	"MS2"	"44.77461"	"253.4"	"100.000"	"60.8807"	"19259"	"19259"	"19241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"428.5"	""	"383.9"	""	"411.3"	""	"262.2"	""	"453.2"	"460.4"	""	"1055"	"32"	"37.000"	"30.000"	"0.0330538813614657"	"22"	"0"	"7.036E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"916.48706"	"1831.96684"	"1831.96644"	"0.22"	"0.00020"	"14/116"	"14"	"116"	"833689.300842285"	"HCD"	"MS2"	"0"	"72.9"	"100.000"	"67.9245"	"22128"	"22128"	"22106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.4"	""	"113.2"	""	"91.2"	""	"83.0"	"0.3"	"142.2"	"146.5"	""	"1056"	"35"	"37.000"	"30.000"	"0.0162792323773166"	"15"	"0.0002277"	"0.001193"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"916.48706"	"1831.96684"	"1831.96644"	"0.22"	"0.00020"	"11/116"	"11"	"116"	"1103297.26293945"	"HCD"	"MS2"	"0"	"91.2"	"100.000"	"61.1824"	"19436"	"19436"	"19411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.2"	""	"143.0"	""	"130.3"	""	"107.6"	"2.4"	"153.1"	"172.6"	""	"1056"	"52"	"37.000"	"30.000"	"0.000310909450027751"	"17"	"0.0001889"	"0.0004211"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"916.48706"	"1831.96684"	"1831.96644"	"0.22"	"0.00020"	"11/116"	"11"	"116"	"1278406.15917969"	"HCD"	"MS2"	"0"	"101.9"	"100.000"	"61.4868"	"19560"	"19560"	"19539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.1"	""	"151.7"	""	"128.2"	""	"144.3"	"1.6"	"186.4"	"189.9"	""	"1056"	"50"	"37.000"	"30.000"	"0.000513610534154238"	"19"	"0.0001889"	"0.001008"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"611.32715"	"1831.96689"	"1831.96644"	"0.25"	"0.00015"	"10/116"	"10"	"116"	"5192533.62811279"	"HCD"	"MS2"	"17.90959"	"126.2"	"100.000"	"64.3495"	"20729"	"20729"	"20707"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.4"	""	"199.1"	""	"185.8"	""	"135.8"	""	"216.7"	"243.7"	""	"1054"	"38"	"37.000"	"30.000"	"0.00767026935466696"	"21"	"0"	"0.000103"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"611.32715"	"1831.96689"	"1831.96644"	"0.25"	"0.00015"	"12/116"	"12"	"116"	"6033454.57067871"	"HCD"	"MS2"	"48.47672"	"158.6"	"100.000"	"64.5238"	"20747"	"20747"	"20729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.0"	""	"248.8"	""	"235.9"	""	"176.4"	"1.6"	"287.4"	"299.6"	""	"1054"	"36"	"37.000"	"30.000"	"0.0135148308724484"	"22"	"0.0001308"	"0.0003106"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"916.48712"	"1831.96697"	"1831.96644"	"0.29"	"0.00026"	"10/116"	"10"	"116"	"713862.209472656"	"HCD"	"MS2"	"0"	"57.6"	"100.000"	"67.4529"	"21937"	"21937"	"21918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.3"	""	"89.2"	""	"85.5"	""	"55.0"	""	"113.5"	"102.9"	""	"1054"	"39"	"37.000"	"30.000"	"0.00605076958528857"	"16"	"0.0006037"	"0.005821"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"916.48712"	"1831.96697"	"1831.96644"	"0.29"	"0.00026"	"11/116"	"11"	"116"	"853945.460021973"	"HCD"	"MS2"	"25.12636"	"67.4"	"100.000"	"60.5553"	"19180"	"19180"	"19155"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.4"	""	"118.2"	""	"86.7"	""	"69.0"	"1.4"	"122.7"	"123.7"	""	"1054"	"56"	"37.000"	"30.000"	"0.00012966137273858"	"17"	"0.0003839"	"0.001986"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"916.48712"	"1831.96697"	"1831.96644"	"0.29"	"0.00026"	"17/116"	"17"	"116"	"859925.92755127"	"HCD"	"MS2"	"30.71274"	"69.8"	"100.000"	"65.4098"	"21162"	"21162"	"21139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.9"	""	"97.8"	""	"88.2"	""	"76.7"	"0.2"	"136.2"	"140.0"	""	"1054"	"52"	"37.000"	"30.000"	"0.000311752981210475"	"18"	"0.0001889"	"0.00056"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"611.32721"	"1831.96708"	"1831.96644"	"0.35"	"0.00021"	"8/116"	"8"	"116"	"4013446.69329834"	"HCD"	"MS2"	"11.28454"	"106.1"	"100.000"	"63.2844"	"20294"	"20294"	"20275"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.3"	""	"177.9"	""	"152.5"	""	"122.6"	""	"183.1"	"195.8"	""	"1069"	"39"	"37.000"	"30.000"	"0.00601101358585323"	"20"	"0"	"4.999E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"611.32721"	"1831.96708"	"1831.96644"	"0.35"	"0.00021"	"10/116"	"10"	"116"	"4414019.55731201"	"HCD"	"MS2"	"18.20136"	"151.4"	"100.000"	"60.0692"	"18928"	"18928"	"18905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"211.6"	""	"219.3"	""	"260.2"	""	"194.9"	""	"274.9"	"274.5"	""	"1069"	"40"	"37.000"	"30.000"	"0.00519933391108789"	"22"	"0"	"9.5E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"611.32721"	"1831.96708"	"1831.96644"	"0.35"	"0.00021"	"9/116"	"9"	"116"	"5392561.48864746"	"HCD"	"MS2"	"36.42379"	"138.2"	"100.000"	"60.5070"	"19160"	"19160"	"19139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"206.0"	""	"198.8"	""	"265.0"	""	"153.6"	""	"244.6"	"239.9"	""	"1069"	"34"	"37.000"	"30.000"	"0.0205091522715623"	"19"	"0"	"6.717E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7805"	"0.0000"	"1"	"1"	"1"	"611.32721"	"1831.96708"	"1831.96644"	"0.35"	"0.00021"	"10/116"	"10"	"116"	"6506709.08306885"	"HCD"	"MS2"	"14.66591"	"177.6"	"100.000"	"61.6758"	"19637"	"19637"	"19619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.1"	""	"262.2"	""	"243.7"	""	"215.1"	""	"320.8"	"339.4"	""	"1069"	"41"	"37.000"	"30.000"	"0.00402668548815673"	"24"	"0"	"7.881E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"916.48718"	"1831.96709"	"1831.96644"	"0.35"	"0.00032"	"9/116"	"9"	"116"	"498021.850341797"	"HCD"	"MS2"	"0"	"45.5"	"100.000"	"59.3833"	"18648"	"18648"	"18617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.5"	""	"73.3"	""	"63.3"	""	"47.1"	"0.6"	"86.5"	"89.0"	""	"1069"	"53"	"37.000"	"30.000"	"0.000263601398213914"	"16"	"0.0001308"	"0.000285"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"916.48718"	"1831.96709"	"1831.96644"	"0.35"	"0.00032"	"9/116"	"9"	"116"	"1245271.76037598"	"HCD"	"MS2"	"0"	"103.0"	"100.000"	"61.6716"	"19582"	"19582"	"19561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.0"	""	"163.1"	""	"143.5"	""	"113.9"	""	"185.2"	"186.5"	""	"1069"	"47"	"37.000"	"30.000"	"0.00118562598638322"	"21"	"0.0001889"	"0.0004753"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"611.32727"	"1831.96726"	"1831.96644"	"0.45"	"0.00027"	"13/116"	"13"	"116"	"4464151.14379883"	"HCD"	"MS2"	"26.03651"	"125.8"	"100.000"	"66.1200"	"21452"	"21452"	"21427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.4"	""	"170.9"	""	"178.2"	""	"160.2"	""	"255.3"	"254.0"	""	"1067"	"36"	"37.000"	"30.000"	"0.0121656249541222"	"19"	"0"	"0.0001037"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"611.32727"	"1831.96726"	"1831.96644"	"0.45"	"0.00027"	"11/116"	"11"	"116"	"20163196.6800537"	"HCD"	"MS2"	"19.20692"	"541.9"	"100.000"	"56.3759"	"17423"	"17423"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"762.4"	""	"767.8"	""	"735.5"	""	"982.0"	""	"984.4"	"902.3"	""	"1067"	"42"	"37.000"	"30.000"	"0.00300700689383147"	"25"	"0"	"3.849E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48730"	"1831.96733"	"1831.96644"	"0.49"	"0.00045"	"9/116"	"9"	"116"	"1220770.60131836"	"HCD"	"MS2"	"0"	"102.4"	"100.000"	"61.8006"	"19688"	"19688"	"19667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.3"	""	"179.1"	""	"148.9"	""	"99.8"	""	"184.1"	"182.7"	""	"1067"	"30"	"37.000"	"30.000"	"0.0476578475571713"	"14"	"0.0002277"	"0.001294"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"916.48730"	"1831.96733"	"1831.96644"	"0.49"	"0.00045"	"11/116"	"11"	"116"	"2829807.86291504"	"HCD"	"MS2"	"2.372547"	"203.4"	"100.000"	"56.6411"	"17532"	"17532"	"17515"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"288.4"	""	"273.6"	""	"273.0"	""	"380.4"	"0.9"	"382.3"	"328.0"	""	"1067"	"60"	"37.000"	"30.000"	"5.02498099744936E-05"	"19"	"0"	"3.031E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"611.32733"	"1831.96744"	"1831.96644"	"0.55"	"0.00033"	"12/116"	"12"	"116"	"3163412.95281982"	"HCD"	"MS2"	"17.42247"	"98.7"	"100.000"	"65.9824"	"21343"	"21343"	"21321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.7"	""	"147.2"	""	"132.9"	""	"115.1"	""	"211.2"	"182.8"	""	"1067"	"26"	"37.000"	"30.000"	"0.150014909301783"	"23"	"0"	"6.566E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"611.32733"	"1831.96744"	"1831.96644"	"0.55"	"0.00033"	"11/116"	"11"	"116"	"5450414.57348633"	"HCD"	"MS2"	"21.78683"	"159.8"	"100.000"	"61.8265"	"19645"	"19645"	"19625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.5"	""	"258.0"	""	"227.3"	""	"167.3"	""	"265.0"	"337.6"	""	"1067"	"37"	"37.000"	"30.000"	"0.0110696636156219"	"20"	"0"	"4.6E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9839"	"0.0000"	"1"	"1"	"1"	"916.48737"	"1831.96745"	"1831.96644"	"0.55"	"0.00051"	"10/116"	"10"	"116"	"1222425.54974365"	"HCD"	"MS2"	"0"	"102.5"	"100.000"	"60.8600"	"19304"	"19304"	"19283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"190.3"	""	"167.4"	""	"129.8"	""	"100.3"	""	"182.7"	"200.6"	""	"1066"	"62"	"37.000"	"30.000"	"3.3321704524944E-05"	"17"	"0.0001889"	"0.0003855"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"916.48743"	"1831.96758"	"1831.96644"	"0.62"	"0.00057"	"16/116"	"16"	"116"	"584436.097290039"	"HCD"	"MS2"	"0"	"52.7"	"100.000"	"67.1229"	"21808"	"21808"	"21789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.7"	""	"81.6"	""	"71.0"	""	"58.2"	""	"91.5"	"98.2"	""	"1060"	"44"	"37.000"	"30.000"	"0.00223499146817149"	"23"	"0.0002277"	"0.001183"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.32739"	"1831.96762"	"1831.96644"	"0.65"	"0.00039"	"11/116"	"11"	"116"	"3358709.64929199"	"HCD"	"MS2"	"0"	"97.0"	"100.000"	"63.2792"	"20239"	"20239"	"20217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.2"	""	"156.8"	""	"127.6"	""	"99.9"	"0.8"	"195.8"	"178.9"	""	"1060"	"33"	"37.000"	"30.000"	"0.0294629256353314"	"15"	"0"	"5.454E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"611.32739"	"1831.96762"	"1831.96644"	"0.65"	"0.00039"	"7/116"	"7"	"116"	"5186715.25830078"	"HCD"	"MS2"	"11.75788"	"150.3"	"100.000"	"61.5149"	"19518"	"19518"	"19497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"248.2"	""	"236.2"	""	"197.2"	""	"171.0"	""	"271.5"	"300.9"	""	"1060"	"27"	"37.000"	"30.000"	"0.113051380396769"	"21"	"0"	"8.062E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48749"	"1831.96770"	"1831.96644"	"0.69"	"0.00063"	"11/116"	"11"	"116"	"796502.881591797"	"HCD"	"MS2"	"0"	"67.7"	"100.000"	"62.6667"	"19989"	"19989"	"19961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.4"	""	"101.3"	""	"91.7"	""	"65.9"	"1.1"	"130.1"	"136.2"	""	"1060"	"63"	"37.000"	"30.000"	"2.92601042818801E-05"	"16"	"0.0001889"	"0.0004961"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"916.48749"	"1831.96770"	"1831.96644"	"0.69"	"0.00063"	"10/116"	"10"	"116"	"821634.73828125"	"HCD"	"MS2"	"5.91239"	"66.0"	"100.000"	"60.1084"	"18944"	"18944"	"18921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.2"	""	"103.4"	""	"91.2"	""	"78.9"	""	"123.5"	"113.4"	""	"1060"	"63"	"37.000"	"30.000"	"2.55432332741317E-05"	"20"	"0.0001859"	"0.0003391"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"916.48749"	"1831.96770"	"1831.96644"	"0.69"	"0.00063"	"15/116"	"15"	"116"	"1252157.6663208"	"HCD"	"MS2"	"14.38657"	"106.8"	"100.000"	"64.6158"	"20785"	"20785"	"20761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.9"	""	"160.1"	""	"137.9"	""	"110.7"	""	"214.9"	"216.1"	""	"1060"	"17"	"37.000"	"30.000"	"1.0502093236767"	"14"	"0.0008731"	"0.008909"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.32745"	"1831.96781"	"1831.96644"	"0.75"	"0.00046"	"9/116"	"9"	"116"	"4319254.58886719"	"HCD"	"MS2"	"44.32176"	"118.0"	"100.000"	"65.4297"	"21117"	"21117"	"21097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.8"	""	"178.6"	""	"149.8"	""	"146.6"	""	"241.3"	"229.0"	""	"1060"	"22"	"37.000"	"30.000"	"0.367515677188781"	"14"	"0"	"0.000107"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"916.48755"	"1831.96782"	"1831.96644"	"0.75"	"0.00069"	"11/116"	"11"	"116"	"747312.854492188"	"HCD"	"MS2"	"0"	"64.1"	"100.000"	"63.9456"	"20511"	"20511"	"20489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.7"	""	"105.4"	""	"83.6"	""	"60.2"	""	"124.2"	"122.6"	""	"1060"	"55"	"37.000"	"30.000"	"0.000172693451531065"	"22"	"0.0001889"	"0.0005763"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"916.48761"	"1831.96794"	"1831.96644"	"0.82"	"0.00075"	"15/116"	"15"	"116"	"746804.408752441"	"HCD"	"MS2"	"0"	"66.6"	"100.000"	"63.3184"	"20255"	"20255"	"20233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.2"	""	"107.6"	""	"88.6"	""	"69.0"	""	"138.3"	"121.9"	""	"1060"	"29"	"37.000"	"30.000"	"0.0653545561611322"	"16"	"0.0001889"	"0.001109"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9818"	"0.0000"	"1"	"1"	"1"	"916.48761"	"1831.96794"	"1831.96644"	"0.82"	"0.00075"	"8/116"	"8"	"116"	"1167419.46954346"	"HCD"	"MS2"	"0"	"103.3"	"100.000"	"60.7333"	"19199"	"19199"	"19177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.5"	""	"166.7"	""	"134.6"	""	"95.6"	""	"191.0"	"203.4"	""	"1060"	"55"	"37.000"	"30.000"	"0.000184618776969086"	"17"	"0.0001889"	"0.0007087"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"611.32751"	"1831.96799"	"1831.96644"	"0.85"	"0.00052"	"9/116"	"9"	"116"	"4520785.41894531"	"HCD"	"MS2"	"13.02506"	"119.2"	"100.000"	"64.2155"	"20621"	"20621"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.3"	""	"197.4"	""	"166.7"	""	"131.9"	"0.6"	"226.8"	"223.2"	""	"1060"	"50"	"37.000"	"30.000"	"0.000515556028601792"	"28"	"0"	"5.215E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48773"	"1831.96819"	"1831.96644"	"0.95"	"0.00087"	"11/116"	"11"	"116"	"1134045.98022461"	"HCD"	"MS2"	"0"	"100.2"	"100.000"	"61.0535"	"19330"	"19330"	"19305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"154.2"	""	"150.3"	""	"143.3"	""	"115.6"	""	"196.7"	"197.0"	""	"1058"	"37"	"37.000"	"30.000"	"0.0102436721892775"	"15"	"0.0004166"	"0.002385"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"916.48773"	"1831.96819"	"1831.96644"	"0.95"	"0.00087"	"10/116"	"10"	"116"	"5604418.74346924"	"HCD"	"MS2"	"0"	"386.4"	"100.000"	"56.9537"	"17660"	"17660"	"17643"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"550.8"	""	"529.2"	""	"511.1"	""	"685.2"	"4.5"	"709.5"	"669.8"	""	"1058"	"60"	"37.000"	"30.000"	"5.31441753057271E-05"	"18"	"0"	"2.878E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"611.32758"	"1831.96817"	"1831.96644"	"0.95"	"0.00058"	"12/116"	"12"	"116"	"3315644.76324463"	"HCD"	"MS2"	"1.834457"	"96.0"	"100.000"	"62.4868"	"19915"	"19915"	"19897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.7"	""	"145.9"	""	"131.7"	""	"121.0"	""	"189.3"	"182.4"	""	"1058"	"36"	"37.000"	"30.000"	"0.0122026926283292"	"16"	"0"	"5.975E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"611.32758"	"1831.96817"	"1831.96644"	"0.95"	"0.00058"	"12/116"	"12"	"116"	"3570712.11230469"	"HCD"	"MS2"	"2.841432"	"97.9"	"100.000"	"62.9810"	"20170"	"20170"	"20147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.9"	""	"156.8"	""	"145.0"	""	"106.6"	""	"184.7"	"179.1"	""	"1058"	"32"	"37.000"	"30.000"	"0.0323188331175047"	"24"	"0"	"7.708E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.32758"	"1831.96817"	"1831.96644"	"0.95"	"0.00058"	"12/116"	"12"	"116"	"2590536.44671631"	"HCD"	"MS2"	"0"	"106.3"	"100.000"	"59.6849"	"18771"	"18771"	"18745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.0"	""	"156.1"	""	"137.9"	""	"147.9"	""	"211.7"	"206.3"	""	"1058"	"31"	"37.000"	"30.000"	"0.0388557836255113"	"14"	"0"	"8.803E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"611.32770"	"1831.96854"	"1831.96644"	"1.14"	"0.00070"	"9/116"	"9"	"116"	"4550687.70056152"	"HCD"	"MS2"	"42.41564"	"134.3"	"100.000"	"57.2461"	"17779"	"17779"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"208.1"	""	"190.9"	""	"189.7"	""	"185.5"	""	"204.5"	"295.6"	""	"1072"	"15"	"37.000"	"30.000"	"1.86708800859302"	"18"	"0.0001308"	"0.0002475"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"611.32782"	"1831.96891"	"1831.96644"	"1.34"	"0.00082"	"10/116"	"10"	"116"	"5915609.30841064"	"HCD"	"MS2"	"16.17355"	"158.7"	"100.000"	"61.3577"	"19508"	"19508"	"19491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"280.9"	""	"232.6"	""	"216.5"	""	"208.4"	"2.2"	"276.1"	"284.7"	""	"1073"	"33"	"37.000"	"30.000"	"0.024522781372838"	"24"	"0"	"5.846E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"916.48816"	"1831.96904"	"1831.96644"	"1.42"	"0.00130"	"9/116"	"9"	"116"	"259534.55871582"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"57.5272"	"17894"	"17894"	"17867"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.1"	""	"37.6"	""	"35.5"	""	"37.0"	"0.5"	"58.7"	"56.5"	""	"1074"	"18"	"37.000"	"30.000"	"0.783383257767863"	"16"	"0.00162"	"0.02233"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"611.32788"	"1831.96909"	"1831.96644"	"1.44"	"0.00088"	"10/116"	"10"	"116"	"4681311.24865723"	"HCD"	"MS2"	"39.15849"	"135.2"	"100.000"	"57.4543"	"17918"	"17918"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.2"	""	"209.8"	""	"199.5"	""	"174.0"	"1.5"	"191.3"	"298.3"	""	"1074"	"13"	"37.000"	"30.000"	"2.88386074650826"	"18"	"0.0001859"	"0.0003531"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"916.48828"	"1831.96929"	"1831.96644"	"1.55"	"0.00142"	"11/116"	"11"	"116"	"971157.904541016"	"HCD"	"MS2"	"0"	"74.3"	"100.000"	"64.0844"	"20621"	"20621"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.7"	""	"115.9"	""	"102.8"	""	"75.2"	""	"144.0"	"141.6"	""	"1077"	"27"	"37.000"	"30.000"	"0.101902703864032"	"18"	"0.000523"	"0.002914"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"611.32806"	"1831.96964"	"1831.96644"	"1.74"	"0.00107"	"11/116"	"11"	"116"	"9477619.97052002"	"HCD"	"MS2"	"40.66675"	"215.3"	"100.000"	"64.6587"	"20855"	"20855"	"20835"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"337.2"	""	"331.0"	""	"257.3"	""	"275.1"	"1.3"	"425.5"	"413.8"	""	"1081"	"15"	"37.000"	"30.000"	"1.73698352113509"	"18"	"0.0001889"	"0.0005727"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.48846"	"1831.96965"	"1831.96644"	"1.75"	"0.00160"	"14/116"	"14"	"116"	"802880.393188477"	"HCD"	"MS2"	"35.91526"	"68.8"	"100.000"	"58.9010"	"18452"	"18452"	"18425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.4"	""	"117.9"	""	"105.4"	""	"81.5"	""	"119.8"	"125.1"	""	"1080"	"11"	"37.000"	"30.000"	"4.33904105980233"	"13"	"0.004789"	"0.139"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"916.48938"	"1831.97148"	"1831.96644"	"2.75"	"0.00252"	"11/116"	"11"	"116"	"1633153.68481445"	"HCD"	"MS2"	"15.83654"	"127.8"	"100.000"	"64.6262"	"20842"	"20842"	"20819"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.3"	""	"201.3"	""	"158.4"	""	"138.0"	""	"265.5"	"250.8"	""	"1085"	"25"	"37.000"	"30.000"	"0.164588596742539"	"16"	"0.00119"	"0.01558"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAQFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"916.49097"	"1831.97466"	"1831.96644"	"4.48"	"0.00411"	"20/116"	"20"	"116"	"1185129.45050049"	"HCD"	"MS2"	"27.85424"	"78.9"	"100.000"	"64.2497"	"20635"	"20635"	"20617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.9"	""	"111.8"	""	"109.1"	""	"77.0"	"1.1"	"159.7"	"168.7"	""	"1078"	"38"	"37.000"	"30.000"	"0.00951894385349842"	"17"	"0.0004166"	"0.002133"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVEALSSLDGDLSGR"	"[K].lAVEALSSLDGDLSGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"611.33667"	"1831.99546"	"1831.99627"	"-0.45"	"-0.00027"	"11/140"	"11"	"140"	"1646861.88757324"	"HCD"	"MS2"	"82.03594"	"38.8"	"100.000"	"73.3298"	"24335"	"24335"	"24305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.6"	""	"53.6"	""	"66.2"	""	"43.6"	"1.2"	"76.8"	"69.8"	""	"1112"	"17"	"37.000"	"30.000"	"1.00478881406207"	"16"	"0"	"3.222E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTGPVTFQFYK"	"[K].eGTGPVTFQFYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"916.50421"	"1832.00115"	"1831.99946"	"0.92"	"0.00084"	"9/106"	"9"	"106"	"1052066.18463135"	"HCD"	"MS2"	"0"	"104.6"	"100.000"	"55.6496"	"17127"	"17127"	"17099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.5"	""	"109.4"	""	"99.9"	""	"206.3"	"1.1"	"254.4"	"219.5"	""	"1113"	"54"	"37.000"	"30.000"	"0.000222057358164532"	"22"	"0"	"7.973E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTGPVTFQFYK"	"[K].eGTGPVTFQFYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"916.50421"	"1832.00115"	"1831.99946"	"0.92"	"0.00084"	"10/106"	"10"	"106"	"1111337.54168701"	"HCD"	"MS2"	"0"	"99.3"	"100.000"	"55.8557"	"17265"	"17265"	"17237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.4"	""	"115.4"	""	"96.8"	""	"214.9"	"2.4"	"222.7"	"194.5"	""	"1113"	"66"	"37.000"	"30.000"	"1.40755433502228E-05"	"24"	"0"	"9.219E-06"	"1.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQEYFDGNLK"	"[R].fLQEYFDGNLk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"916.50616"	"1832.00505"	"1831.99946"	"3.05"	"0.00280"	"10/102"	"10"	"102"	"6464469.08007813"	"HCD"	"MS2"	"25.88445"	"579.5"	"100.000"	"69.6746"	"22843"	"22843"	"22826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"815.9"	""	"782.4"	""	"766.8"	""	"837.9"	"4.0"	"1109.9"	"1179.0"	""	"1144"	"61"	"37.000"	"30.000"	"4.44013350711612E-05"	"24"	"0"	"2.686E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INPSSMFDVHVK"	"[K].iNPSSMFDVHVk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"611.34229"	"1832.01230"	"1832.01406"	"-0.96"	"-0.00059"	"9/116"	"9"	"116"	"4105239.35015869"	"HCD"	"MS2"	"5.920702"	"145.7"	"100.000"	"52.1213"	"15705"	"15705"	"15682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.3"	""	"189.3"	""	"198.2"	""	"198.5"	""	"274.9"	"272.9"	""	"1094"	"31"	"37.000"	"30.000"	"0.0408307470850307"	"23"	"0"	"7.226E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INPSSMFDVHVK"	"[K].iNPSSMFDVHVk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"3"	"3"	"0.8036"	"0.0000"	"1"	"1"	"1"	"611.34241"	"1832.01267"	"1832.01406"	"-0.76"	"-0.00046"	"9/116"	"9"	"116"	"4657541.3427124"	"HCD"	"MS2"	"12.49862"	"164.2"	"100.000"	"52.2593"	"15812"	"15812"	"15782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"265.9"	""	"224.1"	""	"233.3"	""	"212.5"	"1.7"	"299.0"	"318.7"	""	"1091"	"56"	"37.000"	"30.000"	"0.000139892604192041"	"27"	"0"	"5.926E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEMQQILQGLDK"	"[K].aEMQQILQGLDk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"611.34863"	"1832.03135"	"1832.03519"	"-2.10"	"-0.00128"	"8/122"	"8"	"122"	"5012582.71130371"	"HCD"	"MS2"	"81.82015"	"137.9"	"100.000"	"65.7167"	"21287"	"21287"	"21267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.4"	""	"220.4"	""	"201.7"	""	"158.1"	""	"252.0"	"256.0"	""	"1062"	"7"	"37.000"	"30.000"	"9.70721214771797"	"14"	"0.0007444"	"0.007204"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.52179"	"1832.03630"	"1832.03921"	"-1.59"	"-0.00146"	"10/114"	"10"	"114"	"3811952.72290039"	"HCD"	"MS2"	"23.56921"	"220.9"	"100.000"	"64.7762"	"20903"	"20903"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"338.7"	""	"331.4"	""	"230.1"	""	"280.3"	"3.2"	"480.5"	"433.2"	""	"1024"	"59"	"37.000"	"30.000"	"5.93294006351424E-05"	"16"	"0"	"0.0001131"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"611.35065"	"1832.03739"	"1832.03921"	"-1.00"	"-0.00061"	"8/114"	"8"	"114"	"5062146.39886475"	"HCD"	"MS2"	"36.39949"	"150.0"	"100.000"	"65.3513"	"21085"	"21085"	"21065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"206.5"	""	"235.3"	""	"185.4"	""	"188.8"	""	"324.3"	"283.7"	""	"1027"	"15"	"37.000"	"30.000"	"1.47414582886968"	"15"	"0.000494"	"0.002681"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.52246"	"1832.03765"	"1832.03921"	"-0.86"	"-0.00078"	"12/114"	"12"	"114"	"3139145.47418213"	"HCD"	"MS2"	"16.72743"	"185.8"	"100.000"	"65.0869"	"21030"	"21030"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.1"	""	"285.7"	""	"203.4"	""	"230.6"	"0.8"	"391.5"	"383.0"	""	"1017"	"50"	"37.000"	"30.000"	"0.000514388152491158"	"16"	"0"	"0.0001493"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"611.35089"	"1832.03812"	"1832.03921"	"-0.60"	"-0.00036"	"8/114"	"8"	"114"	"41296775.6789551"	"HCD"	"MS2"	"26.0977"	"304.4"	"21.354"	"65.0018"	"20996"	"20996"	"20979"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"414.0"	""	"447.0"	""	"423.2"	""	"455.8"	""	"606.5"	"543.8"	""	"1025"	"21"	"37.000"	"30.000"	"0.4382216903534"	"15"	"0.0004557"	"0.002554"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"611.35095"	"1832.03830"	"1832.03921"	"-0.50"	"-0.00030"	"11/114"	"11"	"114"	"11315487.2352295"	"HCD"	"MS2"	"50.14463"	"251.2"	"93.358"	"64.6951"	"20870"	"20870"	"20851"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"380.8"	""	"379.4"	""	"276.5"	""	"312.5"	"6.6"	"525.8"	"502.5"	""	"1016"	"33"	"37.000"	"30.000"	"0.0254017543768305"	"20"	"0.0001889"	"0.0008806"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"916.52295"	"1832.03862"	"1832.03921"	"-0.32"	"-0.00030"	"16/114"	"16"	"114"	"3034721.58233643"	"HCD"	"MS2"	"35.22686"	"194.4"	"100.000"	"64.7637"	"20845"	"20845"	"20825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"280.8"	""	"298.8"	""	"205.0"	""	"250.5"	""	"428.2"	"385.6"	""	"1017"	"25"	"37.000"	"30.000"	"0.144308182596253"	"21"	"0.0002277"	"0.001352"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"611.35107"	"1832.03867"	"1832.03921"	"-0.30"	"-0.00018"	"9/114"	"9"	"114"	"6427489.78588867"	"HCD"	"MS2"	"53.92323"	"182.1"	"100.000"	"65.3270"	"21128"	"21128"	"21107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.4"	""	"269.4"	""	"248.6"	""	"227.1"	""	"361.3"	"373.2"	""	"1017"	"18"	"37.000"	"30.000"	"0.729946376860334"	"15"	"0.000523"	"0.003226"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"611.35120"	"1832.03904"	"1832.03921"	"-0.10"	"-0.00006"	"10/114"	"10"	"114"	"38757699.0092773"	"HCD"	"MS2"	"26.61423"	"261.9"	"20.200"	"65.0286"	"20954"	"20954"	"20937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"352.4"	""	"365.2"	""	"386.4"	""	"394.5"	""	"498.6"	"489.7"	""	"1023"	"24"	"37.000"	"30.000"	"0.190478357749212"	"15"	"0.0001889"	"0.000435"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.52325"	"1832.03923"	"1832.03921"	"0.01"	"0.00001"	"9/114"	"9"	"114"	"3783031.78051758"	"HCD"	"MS2"	"15.48098"	"217.9"	"100.000"	"65.0720"	"20971"	"20971"	"20953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"319.8"	""	"326.3"	""	"205.1"	""	"312.3"	"7.5"	"481.8"	"416.5"	""	"1011"	"51"	"37.000"	"30.000"	"0.000435232341729316"	"16"	"0"	"0.0001766"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"611.35138"	"1832.03958"	"1832.03921"	"0.20"	"0.00012"	"8/114"	"8"	"114"	"11156371.2029419"	"HCD"	"MS2"	"46.36088"	"273.3"	"100.000"	"64.7288"	"20831"	"20831"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"411.3"	""	"414.2"	""	"315.5"	""	"367.5"	"0.5"	"564.1"	"519.2"	""	"1005"	"34"	"37.000"	"30.000"	"0.0209959759239927"	"19"	"0.0001889"	"0.0005747"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGMGDIEGLIDK"	"[K].lLGMGDIEGLIDk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"5"	"916.53235"	"1832.05742"	"1832.06034"	"-1.59"	"-0.00146"	"4/108"	"4"	"108"	"94954.046081543"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"83.3268"	"28453"	"28453"	"28429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.3"	""	"9.6"	""	"11.4"	""	"11.2"	""	"14.6"	"11.9"	""	"938"	"0"	"36.000"	"29.000"	"46.5771426709417"	"13"	"0.001718"	"0.02338"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGMGDIEGLIDK"	"[K].lLGMGDIEGLIDk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"0"	"3"	"3"	"0.6034"	"0.0000"	"1"	"1"	"1"	"611.35767"	"1832.05844"	"1832.06034"	"-1.04"	"-0.00063"	"9/108"	"9"	"108"	"579773.270751953"	"HCD"	"MS2"	"5.989443"	"20.4"	"100.000"	"83.2469"	"28369"	"28369"	"28351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.0"	""	"24.7"	""	"32.9"	""	"24.1"	"0.6"	"42.2"	"39.2"	""	"919"	"58"	"36.000"	"29.000"	"7.91198610206071E-05"	""	"0"	"5.001E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGMGDIEGLIDK"	"[K].lLGMGDIEGLIDk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"916.53430"	"1832.06133"	"1832.06034"	"0.54"	"0.00049"	"8/108"	"8"	"108"	"100795.924316406"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"83.3067"	"28394"	"28394"	"28366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.1"	""	"9.7"	""	"17.1"	""	"11.6"	""	"12.0"	"15.8"	""	"907"	"15"	"36.000"	"29.000"	"1.50514136500109"	"16"	"0.0004557"	"0.002585"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQLDGLVWGASK"	"[R].sIQLDGLVWGASk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"611.36072"	"1832.06760"	"1832.06821"	"-0.33"	"-0.00020"	"11/138"	"11"	"138"	"5190775.58850098"	"HCD"	"MS2"	"23.96799"	"143.6"	"100.000"	"68.1920"	"22237"	"22237"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.7"	""	"192.2"	""	"208.1"	""	"201.8"	""	"282.7"	"290.6"	""	"832"	"43"	"36.000"	"29.000"	"0.00229664214740795"	"24"	"0"	"6.733E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQLDGLVWGASK"	"[R].sIQLDGLVWGASk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"611.36121"	"1832.06906"	"1832.06821"	"0.47"	"0.00029"	"12/138"	"12"	"138"	"5984783.6239624"	"HCD"	"MS2"	"42.99123"	"160.0"	"100.000"	"68.0296"	"22222"	"22222"	"22202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"235.1"	""	"213.1"	""	"218.9"	""	"233.3"	"1.6"	"300.0"	"314.6"	""	"841"	"38"	"36.000"	"29.000"	"0.00677276489592462"	"23"	"0"	"7.569E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNKPVTFVDGR"	"[R].qLNkPVTFVDGR.[S]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.36353"	"1832.07602"	"1832.07944"	"-1.86"	"-0.00114"	"7/116"	"7"	"116"	"26330786.5466309"	"HCD"	"MS2"	"8.426369"	"328.7"	"25.500"	"38.3205"	"10131"	"10131"	"10113"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"437.2"	""	"494.2"	""	"514.7"	""	"468.7"	"6.9"	"603.3"	"588.3"	""	"784"	"4"	"35.000"	"28.000"	"15.0413240232973"	"13"	"0.0001308"	"0.0002412"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDILESINSIK"	"[K].lEDILESINSIk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6AXN3"	"Transmembrane emp24 domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Tmed5 PE=2 SV=1"	"Q6AXN3"	"Transmembrane emp24 domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Tmed5 PE=2 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"611.36438"	"1832.07859"	"1832.07810"	"0.26"	"0.00016"	"9/110"	"9"	"110"	"293901.387268066"	"HCD"	"MS2"	"21.95844"	"9.4"	"100.000"	"87.6536"	"30147"	"30147"	"30139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"7.9"	""	"12.5"	""	"11.8"	""	"22.3"	"23.7"	""	"748"	"28"	"35.000"	"28.000"	"0.0562175095317669"	"15"	"0.0001308"	"0.0002186"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLPEIITLSK"	"[K].vNFLPEIITLSk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"611.38086"	"1832.12802"	"1832.12974"	"-0.94"	"-0.00057"	"11/118"	"11"	"118"	"1193745.03540039"	"HCD"	"MS2"	"37.64013"	"31.0"	"100.000"	"84.7507"	"29033"	"29033"	"29010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.1"	""	"38.1"	""	"45.7"	""	"57.7"	""	"49.5"	"66.1"	""	"385"	"36"	"32.000"	"25.000"	"0.00494801188183006"	""	"0"	"0.0001134"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLPEIITLSK"	"[K].vNFLPEIITLSk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"916.56781"	"1832.12834"	"1832.12974"	"-0.76"	"-0.00070"	"10/118"	"10"	"118"	"257089.778503418"	"HCD"	"MS2"	"4.446077"	"16.6"	"100.000"	"85.0423"	"29101"	"29101"	"29083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.3"	""	"17.2"	""	"20.2"	""	"28.4"	""	"30.8"	"35.8"	""	"385"	"25"	"32.000"	"25.000"	"0.060315750193075"	""	"0.0001889"	"0.0007716"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLPEIITLSK"	"[K].vNFLPEIITLSk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.6889"	"0.0000"	"1"	"1"	"1"	"611.38104"	"1832.12857"	"1832.12974"	"-0.64"	"-0.00039"	"13/118"	"13"	"118"	"2772593.43566895"	"HCD"	"MS2"	"10.97544"	"70.0"	"100.000"	"85.0486"	"29155"	"29155"	"29138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.0"	""	"94.9"	""	"89.4"	""	"129.2"	""	"133.5"	"135.3"	""	"381"	"45"	"32.000"	"25.000"	"0.000620718915408827"	""	"0"	"1.882E-05"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLPEIITLSK"	"[K].vNFLPEIITLSk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"916.56805"	"1832.12883"	"1832.12974"	"-0.50"	"-0.00046"	"10/118"	"10"	"118"	"296767.016540527"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"84.7877"	"29048"	"29048"	"29026"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.4"	""	"25.5"	""	"26.4"	""	"42.4"	""	"34.1"	"37.9"	""	"381"	"25"	"32.000"	"25.000"	"0.0548144398007145"	"25"	"0.0003146"	"0.001421"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLPEIITLSK"	"[K].vNFLPEIITLSk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4318"	"0.0000"	"1"	"1"	"1"	"916.56818"	"1832.12908"	"1832.12974"	"-0.36"	"-0.00033"	"6/118"	"6"	"118"	"276954.733398438"	"HCD"	"MS2"	"4.401715"	"17.9"	"100.000"	"85.0973"	"29174"	"29174"	"29154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"18.0"	""	"25.3"	""	"29.1"	""	"38.1"	"40.0"	""	"381"	"44"	"32.000"	"25.000"	"0.000776059429216836"	""	"0.0001308"	"0.0002611"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLPEIITLSK"	"[K].vNFLPEIITLSk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"611.38129"	"1832.12931"	"1832.12974"	"-0.24"	"-0.00015"	"15/118"	"15"	"118"	"2439243.16864014"	"HCD"	"MS2"	"12.43198"	"64.8"	"100.000"	"85.0030"	"29085"	"29085"	"29067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.8"	""	"76.2"	""	"98.5"	""	"111.0"	"0.3"	"113.4"	"139.7"	""	"380"	"41"	"32.000"	"25.000"	"0.00144129739255545"	""	"0"	"3.491E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLPEIITLSK"	"[K].vNFLPEIITLSk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"916.56879"	"1832.13030"	"1832.12974"	"0.30"	"0.00028"	"13/118"	"13"	"118"	"296321.624511719"	"HCD"	"MS2"	"0"	"18.5"	"100.000"	"84.7445"	"28980"	"28980"	"28955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.7"	""	"22.8"	""	"25.8"	""	"32.2"	"0.9"	"31.8"	"35.3"	""	"375"	"42"	"32.000"	"25.000"	"0.0012618312305331"	""	"0.0001889"	"0.0004317"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLPEIITLSK"	"[K].vNFLPEIITLSk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.6452"	"0.0000"	"1"	"1"	"1"	"611.38184"	"1832.13095"	"1832.12974"	"0.66"	"0.00040"	"12/118"	"12"	"118"	"1127328.16656494"	"HCD"	"MS2"	"14.99875"	"32.3"	"100.000"	"84.7029"	"28963"	"28963"	"28939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.2"	""	"44.8"	""	"42.7"	""	"52.6"	""	"65.2"	"62.9"	""	"370"	"31"	"32.000"	"25.000"	"0.0148310441726721"	"25"	"0.0001889"	"0.0004103"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLDGAPLIAIHK"	"[R].lLLDGAPLIAIHk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AYR6"	"Haloacid dehalogenase-like hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Hdhd2 PE=2 SV=1"	"Q6AYR6"	"Haloacid dehalogenase-like hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Hdhd2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.39667"	"1832.17545"	"1832.17736"	"-1.04"	"-0.00064"	"11/96"	"11"	"96"	"4271578.50756836"	"HCD"	"MS2"	"43.45406"	"108.7"	"100.000"	"67.4413"	"21982"	"21982"	"21965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.1"	""	"164.3"	""	"153.8"	""	"148.5"	""	"208.6"	"190.1"	""	"171"	"45"	"29.000"	"22.000"	"0.000267279785889098"	"15"	"0"	"2.078E-06"	"1.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLDGAPLIAIHK"	"[R].lLLDGAPLIAIHk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AYR6"	"Haloacid dehalogenase-like hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Hdhd2 PE=2 SV=1"	"Q6AYR6"	"Haloacid dehalogenase-like hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Hdhd2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.39697"	"1832.17636"	"1832.17736"	"-0.54"	"-0.00033"	"11/96"	"11"	"96"	"4217650.215271"	"HCD"	"MS2"	"52.30764"	"109.7"	"100.000"	"67.6118"	"22001"	"22001"	"21985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.3"	""	"164.6"	""	"185.5"	""	"141.7"	"0.5"	"187.1"	"189.1"	""	"167"	"47"	"29.000"	"22.000"	"0.000184368395207078"	"15"	"0"	"3.384E-06"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFmcQGGDFTR.[H]"	"N-Term(TMT6plex); M6(Oxidation); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.93701"	"1832.86675"	"1832.86950"	"-1.50"	"-0.00138"	"13/120"	"13"	"120"	"1743256.77386475"	"HCD"	"MS2"	"32.4134"	"86.6"	"100.000"	"66.8168"	"21736"	"21736"	"21715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"129.5"	""	"128.5"	""	"107.2"	""	"142.8"	"1.5"	"150.5"	"160.5"	""	"523"	"41"	"34.000"	"27.000"	"0.00192518155994874"	"15"	"0.002265"	"0.03293"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFmcQGGDFTR.[H]"	"N-Term(TMT6plex); M6(Oxidation); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"611.62756"	"1832.86814"	"1832.86950"	"-0.74"	"-0.00045"	"11/120"	"11"	"120"	"4755272.21173096"	"HCD"	"MS2"	"46.67601"	"89.4"	"100.000"	"66.8629"	"21755"	"21755"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.2"	""	"132.5"	""	"128.7"	""	"113.9"	""	"181.8"	"170.7"	""	"513"	"31"	"34.000"	"27.000"	"0.0196828222021306"	"16"	"0.0001859"	"0.0003142"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIPGFMCQGGDFTR"	"[R].iIPGFmcQGGDFTR.[H]"	"N-Term(TMT6plex); M6(Oxidation); C7(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"916.93909"	"1832.87090"	"1832.86950"	"0.76"	"0.00070"	"13/120"	"13"	"120"	"1370316.19842529"	"HCD"	"MS2"	"29.29311"	"66.6"	"100.000"	"66.8911"	"21714"	"21714"	"21689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.0"	""	"91.6"	""	"85.6"	""	"118.6"	""	"120.1"	"135.1"	""	"551"	"41"	"34.000"	"27.000"	"0.00217831962013952"	"17"	"0.0008453"	"0.008227"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].tVmGDFAqFVDk.[C]"	"N-Term(TMT6plex); M3(Oxidation); Q8(Deamidated); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.66150"	"1832.96994"	"1832.95046"	"10.63"	"0.00650"	"8/116"	"8"	"116"	"2478678.34674072"	"HCD"	"MS2"	"44.49441"	"69.4"	"100.000"	"67.4483"	"21935"	"21935"	"21918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.5"	""	"102.5"	""	"104.0"	""	"83.6"	""	"137.1"	"126.4"	""	"1128"	"22"	"37.000"	"30.000"	"0.318624453794139"	"14"	"0.0002277"	"0.001303"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSNLADFAFSLYR"	"[K].iSSNLADFAFSLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.9057"	"0.0000"	"1"	"1"	"1"	"611.66284"	"1832.97397"	"1832.97442"	"-0.24"	"-0.00015"	"17/142"	"17"	"142"	"2561437.71520996"	"HCD"	"MS2"	"11.1245"	"28.4"	"100.000"	"82.5290"	"28127"	"28127"	"28109"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.1"	""	"45.0"	""	"40.2"	""	"42.4"	""	"47.0"	"52.9"	""	"1153"	"53"	"37.000"	"30.000"	"0.00027214434328846"	"20"	"0"	"5.922E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSNLADFAFSLYR"	"[K].iSSNLADFAFSLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9531"	"0.0000"	"1"	"1"	"1"	"916.99066"	"1832.97405"	"1832.97442"	"-0.20"	"-0.00018"	"12/142"	"12"	"142"	"519057.804443359"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"82.4621"	"28100"	"28100"	"28078"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.5"	""	"47.7"	""	"46.2"	""	"50.9"	"0.6"	"24.3"	"40.2"	""	"1143"	"64"	"37.000"	"30.000"	"2.38240852653297E-05"	"19"	"0"	"1.09E-06"	"1.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSNLADFAFSLYR"	"[K].iSSNLADFAFSLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"611.66327"	"1832.97525"	"1832.97442"	"0.46"	"0.00028"	"16/142"	"16"	"142"	"2985729.81213379"	"HCD"	"MS2"	"13.40381"	"29.7"	"100.000"	"82.4996"	"28065"	"28065"	"28048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.6"	""	"45.0"	""	"45.5"	""	"45.9"	"0.5"	"47.1"	"54.7"	""	"1182"	"54"	"37.000"	"30.000"	"0.000235823717296026"	"18"	"0"	"7.496E-06"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSNLADFAFSLYR"	"[K].iSSNLADFAFSLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"916.99133"	"1832.97539"	"1832.97442"	"0.53"	"0.00049"	"11/142"	"11"	"142"	"745236.550170898"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"82.4649"	"28050"	"28050"	"28032"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.1"	""	"71.6"	""	"64.4"	""	"67.0"	"1.1"	"39.9"	"50.0"	""	"1174"	"70"	"37.000"	"30.000"	"5.68379101625353E-06"	"19"	"0"	"1.239E-06"	"1.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAINIEELFQGISR"	"[K].nAINIEELFQGISR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"917.00647"	"1833.00566"	"1833.00678"	"-0.61"	"-0.00056"	"3/144"	"3"	"144"	"72045.123840332"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"80.2071"	"27181"	"27181"	"27151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"6.0"	""	"9.1"	""	"7.8"	""	"12.7"	"8.3"	""	"1230"	"6"	"37.000"	"30.000"	"14.7188919018932"	"13"	"0.007595"	"0.2976"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVYIGELPQDFLR"	"[R].gPVYIGELPQDFLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUW1"	"Toll-interacting protein OS=Rattus norvegicus OX=10116 GN=Tollip PE=1 SV=1"	"A2RUW1"	"Toll-interacting protein OS=Rattus norvegicus OX=10116 GN=Tollip PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"917.00781"	"1833.00835"	"1833.01080"	"-1.34"	"-0.00123"	"8/120"	"8"	"120"	"202023.317749023"	"HCD"	"MS2"	"18.51276"	"14.2"	"100.000"	"72.6478"	"24108"	"24108"	"24079"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.9"	""	"18.2"	""	"19.5"	""	"24.0"	""	"26.4"	"28.8"	""	"1224"	"3"	"37.000"	"30.000"	"32.5650254671278"	"13"	"0.004346"	"0.1243"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEKK"	"[K].vWVYPPEkk.[E]"	"N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.71185"	"1833.12101"	"1833.12415"	"-1.72"	"-0.00105"	"7/66"	"7"	"66"	"13452988.0966797"	"HCD"	"MS2"	"20.67718"	"362.7"	"45.607"	"42.0721"	"11620"	"11620"	"11607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"879.2"	""	"713.6"	""	"573.3"	""	"421.8"	""	"400.4"	"424.7"	""	"446"	"1"	"33.000"	"26.000"	"17.0335379737825"	"13"	"0.0007076"	"0.00696"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWVYPPEKK"	"[K].vWVYPPEkk.[E]"	"N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.71222"	"1833.12210"	"1833.12415"	"-1.12"	"-0.00068"	"8/66"	"8"	"66"	"11598103.2236938"	"HCD"	"MS2"	"32.44092"	"366.2"	"60.011"	"42.3637"	"11783"	"11783"	"11767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1052.7"	""	"803.5"	""	"556.8"	""	"364.4"	"2.2"	"331.6"	"322.7"	""	"428"	"11"	"33.000"	"26.000"	"1.69205226391963"	"13"	"0.0002277"	"0.001271"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDLPLGLPFYK"	"[R].lVDLPLGLPFYk.[W]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"F1LP64"	"E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1"	"F1LP64"	"E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"611.71417"	"1833.12796"	"1833.12901"	"-0.57"	"-0.00035"	"9/88"	"9"	"88"	"173972.206481934"	"HCD"	"MS2"	"18.62878"	"5.3"	"100.000"	"89.9941"	"31068"	"31068"	"31054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"7.6"	""	"8.0"	""	"9.3"	""	"9.1"	"9.7"	""	"402"	"25"	"33.000"	"26.000"	"0.0609812128023048"	"23"	"0.0001889"	"0.0006715"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSMIALVDNLASK"	"[K].nSMIALVDNLASk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"612.02112"	"1834.04880"	"1834.05084"	"-1.11"	"-0.00068"	"13/140"	"13"	"140"	"1828408.70910645"	"HCD"	"MS2"	"35.70935"	"50.1"	"100.000"	"73.3299"	"24386"	"24386"	"24367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.0"	""	"73.7"	""	"69.0"	""	"64.9"	""	"88.7"	"116.4"	""	"1040"	"48"	"37.000"	"30.000"	"0.000924705293220239"	"20"	"0"	"9.715E-06"	"1.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSMIALVDNLASK"	"[K].nSMIALVDNLASk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"3"	"3"	"0.7174"	"0.0000"	"1"	"1"	"1"	"612.02136"	"1834.04953"	"1834.05084"	"-0.71"	"-0.00044"	"8/140"	"8"	"140"	"1818926.49005127"	"HCD"	"MS2"	"35.03398"	"50.8"	"100.000"	"73.3463"	"24341"	"24341"	"24321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.3"	""	"72.6"	"2.1"	"65.0"	""	"52.4"	"3.0"	"99.7"	"106.0"	""	"1031"	"46"	"37.000"	"30.000"	"0.00116206031386458"	"29"	"0"	"9.811E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALEMVQMAVEAK"	"[R].gALEMVQMAVEAk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"612.34296"	"1835.01432"	"1835.01710"	"-1.52"	"-0.00093"	"6/122"	"6"	"122"	"2857229.72766113"	"HCD"	"MS2"	"16.88681"	"83.8"	"100.000"	"71.9816"	"23836"	"23836"	"23807"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.5"	""	"122.7"	""	"117.7"	""	"114.5"	"1.4"	"156.1"	"155.9"	""	"1211"	"41"	"37.000"	"30.000"	"0.00453016632559505"	"24"	"0"	"2.452E-05"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALEMVQMAVEAK"	"[R].gALEMVQMAVEAk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"918.01093"	"1835.01457"	"1835.01710"	"-1.38"	"-0.00126"	"9/122"	"9"	"122"	"452008.033203125"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"72.0639"	"23818"	"23818"	"23793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.9"	""	"46.5"	""	"57.6"	""	"43.8"	""	"71.2"	"76.1"	""	"1209"	"55"	"37.000"	"30.000"	"0.000201092699966226"	"19"	"0"	"2.149E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPLVSLMMVEK"	"[K].vDPLVSLMmVEk.[V]"	"N-Term(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"3"	"3"	"0.3000"	"0.0000"	"1"	"1"	"1"	"612.35138"	"1835.03958"	"1835.04225"	"-1.45"	"-0.00089"	"12/106"	"12"	"106"	"1313190.90856934"	"HCD"	"MS2"	"16.88147"	"30.9"	"100.000"	"75.0804"	"25101"	"25101"	"25071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.5"	""	"40.0"	""	"52.1"	""	"43.9"	""	"61.1"	"56.4"	""	"1025"	"30"	"37.000"	"30.000"	"0.0458874442344167"	"17"	"0.0001308"	"0.000263"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPLVSLMMVEK"	"[K].vDPLVSLMmVEk.[V]"	"N-Term(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"3"	"3"	"0.2083"	"0.0000"	"1"	"1"	"1"	"612.35333"	"1835.04544"	"1835.04225"	"1.74"	"0.00106"	"12/106"	"12"	"106"	"1287891.42645264"	"HCD"	"MS2"	"13.05507"	"28.4"	"100.000"	"75.2426"	"25115"	"25115"	"25089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.4"	""	"44.0"	""	"47.6"	""	"37.5"	"1.7"	"53.2"	"48.0"	""	"988"	"24"	"36.000"	"29.000"	"0.177307435714633"	"17"	"0.0001308"	"0.0002573"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALEMVQMAVEAK"	"[R].gALEMVQMAVEAk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.35425"	"1835.04819"	"1835.01710"	"16.94"	"0.01036"	"6/122"	"6"	"122"	"4318632.98425293"	"HCD"	"MS2"	"41.78057"	"116.6"	"100.000"	"72.1744"	"23863"	"23863"	"23841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.3"	""	"151.1"	""	"172.7"	""	"136.5"	""	"225.5"	"235.4"	""	"988"	"3"	"36.000"	"29.000"	"23.6443265607383"	"13"	"0.003788"	"0.08821"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTITEAPIKK"	"[K].fTITEAPIkk.[V]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.39020"	"1835.15604"	"1835.16093"	"-2.67"	"-0.00163"	"8/80"	"8"	"80"	"6181333.62548828"	"HCD"	"MS2"	"9.000267"	"271.0"	"66.089"	"44.5917"	"12689"	"12689"	"12675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"446.1"	""	"450.0"	""	"359.2"	""	"430.2"	""	"461.1"	"419.1"	""	"220"	"5"	"30.000"	"23.000"	"3.43868730383635"	"13"	"0.0003839"	"0.001619"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPIYSFIGGEHFPR"	"[R].sPIYSFIGGEHFPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.65924"	"1835.96317"	"1835.96418"	"-0.55"	"-0.00034"	"12/122"	"12"	"122"	"2807502.8258667"	"HCD"	"MS2"	"8.891119"	"83.7"	"100.000"	"54.6818"	"16731"	"16731"	"16704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.7"	""	"110.0"	""	"144.7"	""	"120.2"	"2.3"	"146.7"	"154.5"	""	"1154"	"22"	"37.000"	"30.000"	"0.389202671981701"	"14"	"0.0001308"	"0.0002737"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPIYSFIGGEHFPR"	"[R].sPIYSFIGGEHFPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.65991"	"1835.96518"	"1835.96418"	"0.54"	"0.00033"	"15/122"	"15"	"122"	"3261469.73150635"	"HCD"	"MS2"	"14.43534"	"83.9"	"100.000"	"54.7846"	"16826"	"16826"	"16805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.8"	""	"112.3"	""	"137.4"	""	"132.2"	""	"143.3"	"155.9"	""	"1172"	"23"	"37.000"	"30.000"	"0.328774113955028"	"14"	"0"	"6.151E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALQLMATYLPK"	"[K].eALQLMATYLPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"612.69470"	"1836.06955"	"1836.07051"	"-0.52"	"-0.00032"	"11/118"	"11"	"118"	"2323714.74511719"	"HCD"	"MS2"	"14.30965"	"56.6"	"100.000"	"75.6504"	"25333"	"25333"	"25311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.3"	""	"79.8"	""	"93.7"	""	"72.2"	""	"104.6"	"106.6"	""	"807"	"33"	"36.000"	"29.000"	"0.0220213296950328"	"19"	"0"	"6.891E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALQLMATYLPK"	"[K].eALQLMATYLPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"918.53900"	"1836.07073"	"1836.07051"	"0.12"	"0.00011"	"8/118"	"8"	"118"	"232382.833557129"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"75.8558"	"25417"	"25417"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.2"	""	"23.3"	""	"24.7"	""	"25.0"	""	"25.2"	"37.5"	""	"790"	"46"	"35.000"	"28.000"	"0.00108043114689115"	"19"	"0"	"0.0001144"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALQLMATYLPK"	"[K].eALQLMATYLPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"612.69513"	"1836.07083"	"1836.07051"	"0.18"	"0.00011"	"10/118"	"10"	"118"	"1532334.36694336"	"HCD"	"MS2"	"5.150814"	"48.7"	"100.000"	"75.9376"	"25398"	"25398"	"25377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.3"	""	"67.1"	""	"81.6"	""	"64.7"	"0.0"	"91.4"	"95.3"	""	"783"	"29"	"35.000"	"28.000"	"0.0496285705483346"	"19"	"0"	"3.748E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALQLMATYLPK"	"[K].eALQLMATYLPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"612.69519"	"1836.07102"	"1836.07051"	"0.27"	"0.00017"	"12/118"	"12"	"118"	"1022716.14379883"	"HCD"	"MS2"	"17.37272"	"35.2"	"100.000"	"75.9717"	"25460"	"25460"	"25439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.0"	""	"47.7"	""	"55.2"	""	"55.0"	"1.8"	"63.3"	"63.4"	""	"783"	"36"	"35.000"	"28.000"	"0.00997084043887043"	"16"	"0"	"2.736E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALQLMATYLPK"	"[K].eALQLMATYLPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"612.69537"	"1836.07157"	"1836.07051"	"0.57"	"0.00035"	"11/118"	"11"	"118"	"1430858.91705322"	"HCD"	"MS2"	"15.22666"	"41.8"	"100.000"	"75.6072"	"25264"	"25264"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.4"	""	"61.7"	""	"63.9"	""	"55.2"	"1.6"	"73.3"	"78.8"	""	"782"	"38"	"35.000"	"28.000"	"0.00638523311626685"	"19"	"0"	"2.461E-05"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALQLMATYLPK"	"[K].eALQLMATYLPk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"918.53961"	"1836.07195"	"1836.07051"	"0.78"	"0.00072"	"10/118"	"10"	"118"	"153345.968505859"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"75.9582"	"25407"	"25407"	"25377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.4"	""	"19.1"	""	"20.7"	""	"12.8"	""	"25.0"	"22.0"	""	"772"	"36"	"35.000"	"28.000"	"0.0107050156039561"	"15"	"0.0001889"	"0.0008845"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFQEVVTPNIFNSR"	"[R].gFQEVVTPNIFNSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"918.99335"	"1836.97942"	"1836.98056"	"-0.62"	"-0.00057"	"7/144"	"7"	"144"	"246671.184753418"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"60.1614"	"18966"	"18966"	"18937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"36.8"	""	"34.6"	""	"28.5"	"1.4"	"39.0"	"35.7"	""	"1127"	"19"	"37.000"	"30.000"	"0.711039815741843"	"18"	"0.0001889"	"0.0006093"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFQEVVTPNIFNSR"	"[R].gFQEVVTPNIFNSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"918.99347"	"1836.97966"	"1836.98056"	"-0.49"	"-0.00045"	"7/144"	"7"	"144"	"223620.894348145"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"60.2924"	"19073"	"19073"	"19043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.2"	""	"38.6"	""	"33.8"	""	"27.5"	""	"30.6"	"33.1"	""	"1119"	"15"	"37.000"	"30.000"	"1.94446482327474"	"13"	"0.0006037"	"0.004499"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTHNLLLNYGLYR"	"[R].mTHNLLLNYGLYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"613.00323"	"1836.99515"	"1836.99919"	"-2.20"	"-0.00135"	"5/114"	"5"	"114"	"2709303.75262451"	"HCD"	"MS2"	"55.27041"	"79.5"	"100.000"	"50.4499"	"15072"	"15072"	"15048"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.3"	""	"94.7"	""	"106.8"	""	"136.3"	"3.3"	"149.8"	"151.3"	""	"1037"	"16"	"37.000"	"30.000"	"1.24379486851161"	"18"	"0.0001889"	"0.0003963"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDALEFLPFEGK"	"[R].iDALEFLPFEGk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q7TNK6"	"tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus OX=10116 GN=Trmt11 PE=2 SV=1"	"Q7TNK6"	"tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus OX=10116 GN=Trmt11 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"919.02838"	"1837.04949"	"1837.05116"	"-0.91"	"-0.00084"	"6/104"	"6"	"104"	"72032.1940917969"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"85.5508"	"29356"	"29356"	"29326"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.8"	""	"8.1"	""	"8.2"	""	"7.1"	""	"7.9"	"8.4"	""	"929"	"7"	"36.000"	"29.000"	"8.3750174062927"	"13"	"0.004346"	"0.1217"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDALEFLPFEGK"	"[R].iDALEFLPFEGk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q7TNK6"	"tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus OX=10116 GN=Trmt11 PE=2 SV=1"	"Q7TNK6"	"tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus OX=10116 GN=Trmt11 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"919.02850"	"1837.04973"	"1837.05116"	"-0.78"	"-0.00071"	"8/104"	"8"	"104"	"94340.4715576172"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"85.4484"	"29267"	"29267"	"29243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"7.4"	""	"9.5"	""	"10.1"	""	"10.1"	"9.6"	""	"912"	"24"	"36.000"	"29.000"	"0.183638967652409"	"17"	"0.000523"	"0.003112"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDALEFLPFEGK"	"[R].iDALEFLPFEGk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q7TNK6"	"tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus OX=10116 GN=Trmt11 PE=2 SV=1"	"Q7TNK6"	"tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus OX=10116 GN=Trmt11 PE=2 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"613.02155"	"1837.05008"	"1837.05116"	"-0.59"	"-0.00036"	"12/104"	"12"	"104"	"466096.529968262"	"HCD"	"MS2"	"6.727456"	"14.8"	"100.000"	"85.5719"	"29364"	"29364"	"29342"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.5"	""	"16.2"	""	"20.0"	""	"25.0"	""	"26.6"	"31.0"	""	"912"	"34"	"36.000"	"29.000"	"0.0188783851717797"	"17"	"0.0001308"	"0.0002264"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDALEFLPFEGK"	"[R].iDALEFLPFEGk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q7TNK6"	"tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus OX=10116 GN=Trmt11 PE=2 SV=1"	"Q7TNK6"	"tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus OX=10116 GN=Trmt11 PE=2 SV=1"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"613.02197"	"1837.05136"	"1837.05116"	"0.11"	"0.00007"	"13/104"	"13"	"104"	"523318.714233398"	"HCD"	"MS2"	"14.70826"	"15.7"	"100.000"	"85.4693"	"29275"	"29275"	"29254"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.6"	""	"17.5"	""	"18.5"	""	"33.2"	""	"25.7"	"31.6"	""	"892"	"57"	"36.000"	"29.000"	"8.61657869389547E-05"	"23"	"0"	"0.0001171"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVSPVGVQPILNK"	"[K].gAVSPVGVQPILNk.[H]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"613.04822"	"1837.13010"	"1837.13114"	"-0.57"	"-0.00035"	"15/114"	"15"	"114"	"8303246.03936768"	"HCD"	"MS2"	"21.35323"	"205.2"	"100.000"	"49.0949"	"14525"	"14525"	"14495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"345.2"	""	"241.7"	""	"234.0"	""	"441.1"	""	"371.2"	"311.8"	""	"370"	"44"	"32.000"	"25.000"	"0.000807554289644307"	"18"	"0"	"2.167E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVSPVGVQPILNK"	"[K].gAVSPVGVQPILNk.[H]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"613.04858"	"1837.13120"	"1837.13114"	"0.03"	"0.00002"	"16/114"	"16"	"114"	"11130596.8184814"	"HCD"	"MS2"	"6.691927"	"279.4"	"100.000"	"48.8311"	"14369"	"14369"	"14351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"468.1"	""	"349.6"	""	"299.0"	""	"610.2"	"5.2"	"484.6"	"427.1"	""	"368"	"49"	"32.000"	"25.000"	"0.000236492745429625"	"20"	"0"	"5.575E-06"	"1.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVSPVGVQPILNK"	"[K].gAVSPVGVQPILNk.[H]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.9451"	"0.0000"	"1"	"1"	"1"	"919.06934"	"1837.13140"	"1837.13114"	"0.14"	"0.00013"	"13/114"	"13"	"114"	"1995000.52453613"	"HCD"	"MS2"	"12.50296"	"105.2"	"100.000"	"48.8382"	"14372"	"14372"	"14351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.2"	""	"110.4"	""	"94.4"	""	"262.5"	"1.8"	"184.2"	"157.9"	""	"368"	"91"	"32.000"	"25.000"	"1.36087370610716E-08"	"23"	"0"	"1.425E-07"	"1.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVSPVGVQPILNK"	"[K].gAVSPVGVQPILNk.[H]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"919.06958"	"1837.13188"	"1837.13114"	"0.40"	"0.00037"	"21/114"	"21"	"114"	"2508295.43493652"	"HCD"	"MS2"	"20.73154"	"131.4"	"100.000"	"49.1662"	"14554"	"14554"	"14527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.8"	""	"139.1"	""	"121.3"	""	"324.9"	""	"238.7"	"208.0"	""	"347"	"94"	"32.000"	"25.000"	"6.68804950550114E-09"	"23"	"0"	"9.796E-07"	"1.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDKK"	"[R].vVFIFGPDkk.[L]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.05621"	"1837.15409"	"1837.15545"	"-0.74"	"-0.00046"	"12/74"	"12"	"74"	"24310445.9685059"	"HCD"	"MS2"	"18.41799"	"738.3"	"56.170"	"55.8717"	"17271"	"17271"	"17253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1144.3"	""	"1234.4"	""	"1406.3"	""	"1071.7"	"6.6"	"988.9"	"1113.1"	""	"249"	"20"	"30.000"	"23.000"	"0.134638526936593"	"14"	"0.0001889"	"0.0006114"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDKK"	"[R].vVFIFGPDkk.[L]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.05640"	"1837.15464"	"1837.15545"	"-0.44"	"-0.00027"	"12/74"	"12"	"74"	"3222201.75408936"	"HCD"	"MS2"	"10.53242"	"202.8"	"100.000"	"56.1962"	"17404"	"17404"	"17381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.7"	""	"302.8"	""	"371.9"	""	"289.6"	"1.2"	"308.1"	"347.5"	""	"250"	"19"	"30.000"	"23.000"	"0.154493429180564"	"14"	"0.0001889"	"0.0006304"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFIFGPDKK"	"[R].vVFIFGPDkk.[L]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.05670"	"1837.15555"	"1837.15545"	"0.05"	"0.00003"	"13/74"	"13"	"74"	"25581202.2165527"	"HCD"	"MS2"	"13.65014"	"762.5"	"53.040"	"55.7001"	"17148"	"17148"	"17131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1193.2"	""	"1225.5"	""	"1483.6"	""	"1066.6"	""	"1060.1"	"1167.7"	""	"245"	"23"	"30.000"	"23.000"	"0.0631155089612652"	"14"	"0.0001889"	"0.0007404"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYSQHDMNK"	"[R].kYSQHDMNk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"460.25967"	"1838.01687"	"1838.01976"	"-1.58"	"-0.00072"	"5/86"	"5"	"86"	"4925595.14862061"	"HCD"	"MS2"	"12.8954"	"261.2"	"100.000"	"24.8779"	"4649"	"4649"	"4626"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"444.7"	""	"336.0"	""	"369.3"	""	"358.6"	"8.7"	"481.7"	"474.1"	""	"1092"	"8"	"37.000"	"30.000"	"9.42307489026651"	"13"	"0.0001889"	"0.0007001"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFLGTFLYEYSR"	"[K].dVFLGTFLYEYSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"613.65509"	"1838.95072"	"1838.95262"	"-1.03"	"-0.00063"	"13/118"	"13"	"118"	"4808785.03588867"	"HCD"	"MS2"	"7.426704"	"27.7"	"100.000"	"81.4719"	"27696"	"27696"	"27678"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.9"	""	"44.2"	""	"53.7"	""	"38.8"	"0.7"	"46.9"	"42.9"	""	"1070"	"42"	"37.000"	"30.000"	"0.00364211606901152"	"24"	"0"	"3.11E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFLGTFLYEYSR"	"[K].dVFLGTFLYEYSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"919.97906"	"1838.95085"	"1838.95262"	"-0.96"	"-0.00088"	"12/118"	"12"	"118"	"988349.718139648"	"HCD"	"MS2"	"12.88591"	"49.0"	"100.000"	"81.4327"	"27680"	"27680"	"27662"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.4"	""	"83.5"	""	"70.0"	""	"76.7"	"0.1"	"75.8"	"79.9"	""	"1072"	"41"	"37.000"	"30.000"	"0.00424780713137533"	"27"	"0"	"6.616E-06"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFLGTFLYEYSR"	"[K].dVFLGTFLYEYSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"919.97925"	"1838.95122"	"1838.95262"	"-0.76"	"-0.00070"	"18/118"	"18"	"118"	"4526163.19958496"	"HCD"	"MS2"	"3.549657"	"180.8"	"100.000"	"81.7421"	"27807"	"27807"	"27790"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.5"	""	"320.7"	""	"243.1"	""	"274.8"	"0.7"	"288.3"	"288.9"	""	"1069"	"53"	"37.000"	"30.000"	"0.000289699475919669"	""	"0"	"6.494E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFLGTFLYEYSR"	"[K].dVFLGTFLYEYSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"919.97961"	"1838.95195"	"1838.95262"	"-0.36"	"-0.00033"	"7/118"	"7"	"118"	"326942.120056152"	"HCD"	"MS2"	"14.07942"	"23.6"	"100.000"	"82.0630"	"27937"	"27937"	"27918"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.6"	""	"43.9"	""	"36.1"	""	"30.5"	""	"36.0"	"35.7"	""	"1092"	"52"	"37.000"	"30.000"	"0.000362403716439442"	""	"0"	"1.647E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFLGTFLYEYSR"	"[K].dVFLGTFLYEYSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"919.97968"	"1838.95207"	"1838.95262"	"-0.30"	"-0.00027"	"6/118"	"6"	"118"	"351353.292480469"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"82.0333"	"27874"	"27874"	"27856"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.7"	""	"40.8"	""	"33.6"	""	"29.6"	""	"36.2"	"31.6"	""	"1092"	"32"	"37.000"	"30.000"	"0.0371700069846782"	"19"	"0.0001889"	"0.000601"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFLGTFLYEYSR"	"[K].dVFLGTFLYEYSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"919.97968"	"1838.95207"	"1838.95262"	"-0.30"	"-0.00027"	"7/118"	"7"	"118"	"834002.743835449"	"HCD"	"MS2"	"14.49132"	"44.8"	"100.000"	"81.4260"	"27627"	"27627"	"27600"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.8"	""	"77.5"	""	"66.6"	""	"68.4"	""	"69.7"	"79.0"	""	"1092"	"37"	"37.000"	"30.000"	"0.0120557058422832"	"18"	"0"	"5.651E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFLGTFLYEYSR"	"[K].dVFLGTFLYEYSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7636"	"0.0000"	"1"	"1"	"1"	"613.65558"	"1838.95218"	"1838.95262"	"-0.24"	"-0.00014"	"15/118"	"15"	"118"	"3437939.23925781"	"HCD"	"MS2"	"31.4356"	"22.8"	"100.000"	"81.4445"	"27634"	"27634"	"27616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.0"	""	"32.7"	""	"36.9"	""	"36.9"	""	"38.9"	"36.6"	""	"1091"	"55"	"37.000"	"30.000"	"0.000156601080749447"	"29"	"0"	"1.886E-05"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFLGTFLYEYSR"	"[K].dVFLGTFLYEYSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7358"	"0.0000"	"1"	"1"	"1"	"613.65570"	"1838.95255"	"1838.95262"	"-0.04"	"-0.00002"	"15/118"	"15"	"118"	"10853197.6881104"	"HCD"	"MS2"	"30.84646"	"32.5"	"50.464"	"81.7814"	"27823"	"27823"	"27806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.8"	""	"38.5"	""	"44.5"	""	"60.0"	""	"59.6"	"61.4"	""	"1075"	"53"	"37.000"	"30.000"	"0.000281435234664841"	"30"	"0"	"4.283E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFLGTFLYEYSR"	"[K].dVFLGTFLYEYSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"919.98035"	"1838.95342"	"1838.95262"	"0.43"	"0.00040"	"12/118"	"12"	"118"	"6088028.83935547"	"HCD"	"MS2"	"2.190675"	"260.6"	"100.000"	"81.7147"	"27745"	"27745"	"27728"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"416.0"	""	"468.0"	""	"352.6"	""	"383.0"	""	"424.3"	"426.6"	""	"1090"	"47"	"37.000"	"30.000"	"0.00113604753128802"	"23"	"0"	"1.319E-05"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFLGTFLYEYSR"	"[K].dVFLGTFLYEYSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7679"	"0.0000"	"1"	"1"	"1"	"613.65601"	"1838.95346"	"1838.95262"	"0.46"	"0.00028"	"13/118"	"13"	"118"	"14592633.5853271"	"HCD"	"MS2"	"23.45531"	"27.4"	"33.095"	"81.7540"	"27761"	"27761"	"27744"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.4"	""	"35.2"	""	"39.8"	""	"48.8"	""	"48.9"	"56.2"	""	"1090"	"56"	"37.000"	"30.000"	"0.000123423114763822"	"29"	"0"	"5.903E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLANWMIPGK"	"[K].yGDLANWmIPGk.[M]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"919.99695"	"1838.98662"	"1838.98751"	"-0.49"	"-0.00045"	"13/100"	"13"	"100"	"424620.837219238"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"62.9533"	"20159"	"20159"	"20131"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.0"	""	"42.7"	""	"41.4"	""	"70.6"	"1.1"	"58.1"	"53.6"	""	"1115"	"45"	"37.000"	"30.000"	"0.00188471146184835"	"19"	"0.0001859"	"0.0003255"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLANWMIPGK"	"[K].yGDLANWmIPGk.[M]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"919.99884"	"1838.99040"	"1838.98751"	"1.57"	"0.00145"	"9/100"	"9"	"100"	"411747.701171875"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"62.8603"	"20068"	"20068"	"20041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.6"	""	"41.3"	""	"44.6"	""	"81.8"	"0.2"	"55.7"	"54.7"	""	"1125"	"39"	"37.000"	"30.000"	"0.00785457203093966"	"15"	"0.0001308"	"0.0002274"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGIVETHFTFK"	"[K].tTGIVETHFTFk.[EDN]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"4"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"P08753; P04897; P10824; P59215"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"613.68494"	"1839.04026"	"1839.04166"	"-0.76"	"-0.00047"	"13/106"	"13"	"106"	"16261918.3348999"	"HCD"	"MS2"	"7.739647"	"441.0"	"75.244"	"44.5801"	"12634"	"12634"	"12616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.0"	""	"454.0"	""	"415.2"	""	"865.4"	""	"1034.9"	"1070.7"	""	"888"	"31"	"36.000"	"29.000"	"0.0317236368777528"	"20"	"0"	"0.0001179"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGIVETHFTFK"	"[K].tTGIVETHFTFk.[EDN]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"4"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"P08753; P04897; P10824; P59215"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"613.68518"	"1839.04099"	"1839.04166"	"-0.36"	"-0.00022"	"15/106"	"15"	"106"	"20214614.1855469"	"HCD"	"MS2"	"23.26534"	"389.3"	"56.837"	"44.8688"	"12801"	"12801"	"12784"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.0"	""	"393.8"	""	"356.5"	""	"790.1"	""	"879.2"	"999.9"	""	"885"	"56"	"36.000"	"29.000"	"0.000104933286475528"	"20"	"0"	"8.511E-06"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDDTVLVSLLK"	"[K].yDDDTVLVSLLk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"613.68854"	"1839.05106"	"1839.05155"	"-0.27"	"-0.00016"	"8/102"	"8"	"102"	"489563.355224609"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"77.4451"	"26003"	"26003"	"25977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.6"	""	"30.1"	""	"28.2"	""	"41.8"	""	"33.8"	"40.2"	""	"854"	"29"	"36.000"	"29.000"	"0.0503996911423289"	"24"	"0.0001889"	"0.0006059"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVHGGLINKK"	"[K].eGVHGGLINkk.[C]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.71790"	"1839.13913"	"1839.14193"	"-1.52"	"-0.00093"	"9/84"	"9"	"84"	"3669162.41259766"	"HCD"	"MS2"	"37.31704"	"229.2"	"100.000"	"29.0106"	"6290"	"6290"	"6275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"679.7"	""	"458.1"	""	"420.5"	""	"229.6"	""	"159.5"	"200.4"	""	"285"	"13"	"31.000"	"24.000"	"0.637991458451316"	"13"	"0"	"1.411E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVHGGLINKK"	"[K].eGVHGGLINkk.[C]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.71844"	"1839.14078"	"1839.14193"	"-0.62"	"-0.00038"	"10/84"	"10"	"84"	"3669016.98913574"	"HCD"	"MS2"	"0"	"225.1"	"100.000"	"29.0702"	"6355"	"6355"	"6346"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"635.4"	""	"475.4"	""	"399.5"	""	"222.5"	""	"176.8"	"200.3"	""	"281"	"14"	"31.000"	"24.000"	"0.613304744297433"	"13"	"0"	"1.803E-05"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVHGGLINKK"	"[K].eGVHGGLINkk.[C]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"460.54147"	"1839.14406"	"1839.14193"	"1.16"	"0.00053"	"11/84"	"11"	"84"	"35198678.2019043"	"HCD"	"MS2"	"17.14709"	"536.6"	"33.398"	"29.0718"	"6313"	"6313"	"6304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1427.7"	""	"1104.8"	""	"957.6"	""	"498.4"	""	"476.7"	"574.0"	""	"263"	"13"	"31.000"	"24.000"	"0.632303743211393"	"13"	"0"	"0.0001688"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAGCDFLTISPK"	"[K].aLAGcDFLTISPk.[L]"	"N-Term(TMT6plex); C5(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"920.50879"	"1840.01030"	"1840.01128"	"-0.53"	"-0.00049"	"12/106"	"12"	"106"	"198853.150085449"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"78.2507"	"26332"	"26332"	"26305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.5"	""	"25.0"	""	"23.1"	""	"29.0"	""	"29.9"	"32.0"	""	"1095"	"53"	"37.000"	"30.000"	"0.000250832682976207"	"27"	"0.0001308"	"0.0002908"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAGCDFLTISPK"	"[K].aLAGcDFLTISPk.[L]"	"N-Term(TMT6plex); C5(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"920.50916"	"1840.01103"	"1840.01128"	"-0.14"	"-0.00013"	"9/106"	"9"	"106"	"169085.194213867"	"HCD"	"MS2"	"10.29687"	"14.0"	"100.000"	"78.2686"	"26390"	"26390"	"26367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.2"	""	"24.9"	""	"18.6"	""	"18.6"	""	"22.6"	"30.7"	""	"1081"	"36"	"37.000"	"30.000"	"0.0142165984961945"	"25"	"0.0001889"	"0.0009447"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAGCDFLTISPK"	"[K].aLAGcDFLTISPk.[L]"	"N-Term(TMT6plex); C5(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"614.00873"	"1840.01163"	"1840.01128"	"0.19"	"0.00012"	"13/106"	"13"	"106"	"1226187.90600586"	"HCD"	"MS2"	"47.30698"	"38.8"	"100.000"	"78.1117"	"26326"	"26326"	"26303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.0"	""	"55.6"	""	"53.8"	""	"57.7"	""	"71.1"	"79.1"	""	"1088"	"38"	"37.000"	"30.000"	"0.0094536365083966"	"24"	"0"	"3.019E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMAFLHTLEPLIPR"	"[R].gmAFLHTLEPLIPR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"614.01556"	"1840.03214"	"1840.03524"	"-1.69"	"-0.00103"	"11/108"	"11"	"108"	"5088510.68408203"	"HCD"	"MS2"	"0"	"70.1"	"100.000"	"59.8528"	"18893"	"18893"	"18869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.3"	""	"85.4"	""	"98.3"	""	"141.8"	"1.7"	"117.2"	"127.1"	""	"972"	"36"	"36.000"	"29.000"	"0.0115248762095156"	"18"	"0"	"1.727E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMAFLHTLEPLIPR"	"[R].gmAFLHTLEPLIPR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"614.01575"	"1840.03269"	"1840.03524"	"-1.39"	"-0.00085"	"7/108"	"7"	"108"	"6311549.55621338"	"HCD"	"MS2"	"3.217055"	"65.0"	"100.000"	"60.1587"	"19018"	"19018"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.5"	""	"72.2"	""	"77.8"	""	"172.1"	"2.0"	"116.0"	"104.4"	""	"995"	"50"	"36.000"	"29.000"	"0.000482828708704631"	"22"	"0"	"1.108E-05"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMAFLHTLEPLIPR"	"[R].gmAFLHTLEPLIPR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.8654"	"0.0000"	"1"	"1"	"1"	"614.01636"	"1840.03452"	"1840.03524"	"-0.39"	"-0.00024"	"7/108"	"7"	"108"	"4383495.22106934"	"HCD"	"MS2"	"9.362892"	"63.0"	"100.000"	"59.6735"	"18766"	"18766"	"18745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.4"	""	"72.8"	""	"78.6"	""	"130.4"	"1.7"	"110.2"	"122.1"	""	"963"	"52"	"36.000"	"29.000"	"0.000291471631194009"	"23"	"0"	"8.621E-06"	"1.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMAFLHTLEPLIPR"	"[R].gmAFLHTLEPLIPR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"614.01666"	"1840.03543"	"1840.03524"	"0.10"	"0.00006"	"9/108"	"9"	"108"	"5532386.41455078"	"HCD"	"MS2"	"1.135784"	"68.0"	"100.000"	"59.9842"	"18893"	"18893"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.1"	""	"78.6"	""	"92.2"	""	"169.6"	""	"125.5"	"106.7"	""	"965"	"52"	"36.000"	"29.000"	"0.000326210035626631"	"20"	"0"	"1.046E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMAFLHTLEPLIPR"	"[R].gmAFLHTLEPLIPR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"614.01691"	"1840.03617"	"1840.03524"	"0.50"	"0.00031"	"8/108"	"8"	"108"	"2423714.30926514"	"HCD"	"MS2"	"16.14071"	"51.9"	"100.000"	"60.3067"	"19025"	"19025"	"19001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.1"	""	"57.7"	""	"59.8"	""	"141.4"	""	"97.8"	"81.5"	""	"959"	"31"	"36.000"	"29.000"	"0.0362066723165575"	"22"	"0"	"8.713E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWNIWADIPAPK"	"[K].aWNIWADIPAPk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"614.02234"	"1840.05246"	"1840.05216"	"0.16"	"0.00010"	"11/106"	"11"	"106"	"824584.545288086"	"HCD"	"MS2"	"6.211143"	"24.6"	"100.000"	"77.1142"	"25919"	"25919"	"25893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.1"	""	"32.4"	""	"29.1"	""	"41.4"	"0.7"	"46.3"	"48.6"	""	"870"	"22"	"36.000"	"29.000"	"0.289393822947758"	"14"	"0.0001308"	"0.0002919"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWNIWADIPAPK"	"[K].aWNIWADIPAPk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"614.02234"	"1840.05246"	"1840.05216"	"0.16"	"0.00010"	"12/106"	"12"	"106"	"2403137.26287842"	"HCD"	"MS2"	"57.66005"	"56.0"	"100.000"	"76.7762"	"25781"	"25781"	"25765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.9"	""	"78.3"	""	"84.5"	""	"90.7"	""	"90.7"	"113.0"	""	"870"	"37"	"36.000"	"29.000"	"0.00969369289932581"	"17"	"0"	"2.954E-05"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWNIWADIPAPK"	"[K].aWNIWADIPAPk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"920.52997"	"1840.05266"	"1840.05216"	"0.27"	"0.00025"	"12/106"	"12"	"106"	"324826.984313965"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"76.8106"	"25795"	"25795"	"25774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.3"	""	"25.3"	""	"26.4"	""	"26.7"	""	"35.8"	"47.9"	""	"875"	"47"	"36.000"	"29.000"	"0.000801637559787406"	"18"	"0"	"0.0001331"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWNIWADIPAPK"	"[K].aWNIWADIPAPk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"920.53040"	"1840.05351"	"1840.05216"	"0.74"	"0.00068"	"12/106"	"12"	"106"	"397964.364318848"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"76.9175"	"25788"	"25788"	"25761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"35.6"	""	"29.2"	""	"34.0"	""	"39.5"	"53.8"	""	"858"	"41"	"36.000"	"29.000"	"0.00306518923886395"	"19"	"0"	"0.0001414"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWNIWADIPAPK"	"[K].aWNIWADIPAPk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"614.02301"	"1840.05448"	"1840.05216"	"1.26"	"0.00077"	"11/106"	"11"	"106"	"2338439.87487793"	"HCD"	"MS2"	"16.38902"	"51.8"	"100.000"	"76.8396"	"25756"	"25756"	"25739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.3"	""	"75.1"	""	"76.8"	""	"89.5"	"0.7"	"81.0"	"94.3"	""	"848"	"28"	"36.000"	"29.000"	"0.0728393156154818"	"17"	"0"	"0.0001129"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIMVTGDHPITAK"	"[RK].vIMVTGDHPITAk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"6"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P09626; Q64541; P06687; P54708; P06685; P06686"	"Potassium-transporting ATPase alpha chain 1 OS=Rattus norvegicus OX=10116 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-4 OS=Rattus norvegicus OX=10116 GN=Atp1a4 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Potassium-transporting ATPase alpha chain 2 OS=Rattus norvegicus OX=10116 GN=Atp12a PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"614.03027"	"1840.07627"	"1840.07666"	"-0.21"	"-0.00013"	"12/108"	"12"	"108"	"6183224.88061523"	"HCD"	"MS2"	"40.60253"	"286.3"	"100.000"	"40.0965"	"10814"	"10814"	"10789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"401.1"	""	"429.9"	""	"427.4"	""	"421.1"	""	"505.3"	"529.6"	""	"722"	"26"	"35.000"	"28.000"	"0.0840440944017068"	"15"	"0"	"0.0001596"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIMVTGDHPITAK"	"[RK].vIMVTGDHPITAk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"6"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P09626; Q64541; P06687; P54708; P06685; P06686"	"Potassium-transporting ATPase alpha chain 1 OS=Rattus norvegicus OX=10116 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-4 OS=Rattus norvegicus OX=10116 GN=Atp1a4 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Potassium-transporting ATPase alpha chain 2 OS=Rattus norvegicus OX=10116 GN=Atp12a PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"614.03033"	"1840.07645"	"1840.07666"	"-0.11"	"-0.00007"	"13/108"	"13"	"108"	"6568149.52191162"	"HCD"	"MS2"	"34.7351"	"321.7"	"100.000"	"40.2369"	"10915"	"10915"	"10893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"455.7"	""	"466.3"	""	"479.0"	""	"464.8"	""	"572.6"	"613.4"	""	"722"	"33"	"35.000"	"28.000"	"0.0185569758221256"	"16"	"0"	"0.0001734"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVPSDTLLGLPK"	"[R].eLVPSDTLLGLPk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.04443"	"1840.11875"	"1840.11957"	"-0.45"	"-0.00027"	"5/108"	"5"	"108"	"1439773.6416626"	"HCD"	"MS2"	"23.33164"	"39.9"	"100.000"	"68.8664"	"22564"	"22564"	"22538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.4"	""	"48.8"	""	"63.1"	""	"61.0"	"0.8"	"73.4"	"74.5"	""	"371"	"6"	"32.000"	"25.000"	"4.19125335375991"	"13"	"0.00738"	"0.2761"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVPSDTLLGLPK"	"[R].eLVPSDTLLGLPk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"614.04449"	"1840.11893"	"1840.11957"	"-0.35"	"-0.00021"	"12/108"	"12"	"108"	"4905158.66088867"	"HCD"	"MS2"	"23.19226"	"118.4"	"100.000"	"68.5414"	"22431"	"22431"	"22410"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.8"	""	"154.8"	""	"176.8"	""	"176.0"	""	"226.1"	"227.8"	""	"371"	"39"	"32.000"	"25.000"	"0.0025429856762358"	""	"0"	"0.0001318"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVPSDTLLGLPK"	"[R].eLVPSDTLLGLPk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"614.04462"	"1840.11930"	"1840.11957"	"-0.15"	"-0.00009"	"14/108"	"14"	"108"	"4209304.32714844"	"HCD"	"MS2"	"8.189339"	"101.5"	"100.000"	"68.7043"	"22446"	"22446"	"22426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.5"	""	"143.3"	""	"153.4"	""	"156.4"	"0.0"	"176.0"	"192.7"	""	"373"	"36"	"32.000"	"25.000"	"0.00450483445623982"	""	"0.0001308"	"0.0002271"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGLTPSQIGVILR"	"[K].kGLTPSQIGVILR.[D]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.06372"	"1840.17661"	"1840.17842"	"-0.99"	"-0.00061"	"17/124"	"17"	"124"	"8020622.96038818"	"HCD"	"MS2"	"10.73748"	"344.1"	"100.000"	"47.2806"	"13735"	"13735"	"13704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"506.3"	""	"514.0"	""	"593.0"	""	"535.1"	""	"573.3"	"536.0"	""	"119"	"19"	"27.000"	"20.000"	"0.0715347338597361"	"14"	"0.0002277"	"0.001291"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGLTPSQIGVILR"	"[K].kGLTPSQIGVILR.[D]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.06506"	"1840.18064"	"1840.17842"	"1.20"	"0.00074"	"11/124"	"11"	"124"	"12001637.3909302"	"HCD"	"MS2"	"50.70863"	"473.8"	"100.000"	"47.6020"	"13914"	"13914"	"13890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"707.1"	""	"724.9"	""	"734.1"	""	"719.9"	""	"810.0"	"789.8"	""	"111"	"29"	"27.000"	"20.000"	"0.00718278692004743"	"14"	"0.0001308"	"0.0003118"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVGVPAAFDMMLTGR"	"[K].mVGVPAAFDMMLTGR.[N]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"614.31500"	"1840.93045"	"1840.93210"	"-0.89"	"-0.00055"	"9/120"	"9"	"120"	"1415499.32659912"	"HCD"	"MS2"	"22.57925"	"27.3"	"100.000"	"73.5883"	"24440"	"24440"	"24417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.5"	""	"36.4"	""	"38.9"	""	"50.1"	""	"52.2"	"46.5"	""	"897"	"43"	"36.000"	"29.000"	"0.00215160451713555"	"16"	"0"	"4.509E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVGVPAAFDMMLTGR"	"[K].mVGVPAAFDMMLTGR.[N]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.31500"	"1840.93045"	"1840.93210"	"-0.89"	"-0.00055"	"10/120"	"10"	"120"	"1710635.05548096"	"HCD"	"MS2"	"14.68399"	"31.6"	"100.000"	"73.5260"	"24466"	"24466"	"24447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.0"	""	"44.2"	""	"46.7"	""	"55.6"	""	"54.2"	"58.0"	""	"897"	"37"	"36.000"	"29.000"	"0.00978954365461586"	"15"	"7.476E-05"	"0.0001888"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLTYTSWEDALSR"	"[K].gLLTYTSWEDALSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"920.98492"	"1840.96257"	"1840.96424"	"-0.91"	"-0.00084"	"12/122"	"12"	"122"	"240296.331970215"	"HCD"	"MS2"	"22.12269"	"15.4"	"100.000"	"72.7237"	"24139"	"24139"	"24111"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.5"	""	"25.0"	""	"21.2"	""	"27.1"	""	"31.5"	"29.4"	""	"998"	"16"	"36.000"	"29.000"	"1.18604330302581"	"14"	"0.0002277"	"0.001149"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLTYTSWEDALSR"	"[K].gLLTYTSWEDALSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.32690"	"1840.96616"	"1840.96424"	"1.04"	"0.00064"	"14/122"	"14"	"122"	"702307.558654785"	"HCD"	"MS2"	"26.66255"	"32.1"	"100.000"	"72.8591"	"24143"	"24143"	"24113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.8"	""	"44.8"	""	"49.3"	""	"54.0"	"0.7"	"55.5"	"58.1"	""	"1013"	"21"	"37.000"	"30.000"	"0.392264900586976"	"14"	"0.0001308"	"0.0002503"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILGTNTIMDK"	"[K].yNILGTNTIMDk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"614.34552"	"1841.02201"	"1841.02429"	"-1.24"	"-0.00076"	"13/118"	"13"	"118"	"11820408.5795898"	"HCD"	"MS2"	"23.00187"	"283.8"	"68.887"	"58.6992"	"18423"	"18423"	"18405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"287.3"	""	"274.6"	""	"260.7"	""	"536.0"	""	"749.9"	"599.6"	""	"1055"	"31"	"37.000"	"30.000"	"0.0401996677788405"	"21"	"0"	"9.935E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILGTNTIMDK"	"[K].yNILGTNTIMDk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"921.01489"	"1841.02251"	"1841.02429"	"-0.97"	"-0.00089"	"13/118"	"13"	"118"	"444330.65814209"	"HCD"	"MS2"	"0"	"45.5"	"100.000"	"58.9128"	"18510"	"18510"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.0"	""	"50.2"	""	"43.2"	""	"69.3"	"0.7"	"105.5"	"104.6"	""	"1052"	"33"	"37.000"	"30.000"	"0.0243773079781288"	""	"0.0001308"	"0.0002394"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILGTNTIMDK"	"[K].yNILGTNTIMDk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"921.01550"	"1841.02373"	"1841.02429"	"-0.31"	"-0.00028"	"11/118"	"11"	"118"	"3548344.14923096"	"HCD"	"MS2"	"0"	"290.8"	"100.000"	"58.5726"	"18375"	"18375"	"18357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"443.5"	""	"351.0"	""	"335.7"	""	"351.1"	""	"662.5"	"621.5"	""	"1053"	"47"	"37.000"	"30.000"	"0.000953670558764221"	"29"	"0"	"5.915E-06"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILGTNTIMDK"	"[K].yNILGTNTIMDk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.6750"	"0.0000"	"1"	"1"	"1"	"614.34619"	"1841.02402"	"1841.02429"	"-0.15"	"-0.00009"	"8/118"	"8"	"118"	"13328075.1020508"	"HCD"	"MS2"	"25.66069"	"331.9"	"68.626"	"58.4816"	"18284"	"18284"	"18266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.3"	""	"292.4"	""	"286.5"	""	"682.9"	""	"900.7"	"688.6"	""	"1059"	"40"	"37.000"	"30.000"	"0.00502187576317826"	"28"	"0"	"5.112E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILGTNTIMDK"	"[K].yNILGTNTIMDk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"921.01569"	"1841.02410"	"1841.02429"	"-0.11"	"-0.00010"	"11/118"	"11"	"118"	"3437707.61212158"	"HCD"	"MS2"	"0"	"278.6"	"100.000"	"58.4036"	"18252"	"18252"	"18234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"425.2"	""	"344.0"	""	"304.1"	""	"329.4"	""	"637.4"	"613.1"	""	"1055"	"48"	"37.000"	"30.000"	"0.00081137657275985"	"29"	"0"	"7.498E-06"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMFLTDSNNIK"	"[R].vTMFLTDSNNIk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"921.01801"	"1841.02873"	"1841.02429"	"2.41"	"0.00222"	"6/106"	"6"	"106"	"256213.737060547"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"59.8871"	"18854"	"18854"	"18825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.8"	""	"36.2"	""	"35.2"	""	"37.0"	"0.9"	"47.4"	"48.5"	""	"1012"	"27"	"37.000"	"30.000"	"0.105718384221214"	"16"	"0.0001889"	"0.0006472"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMFLTDSNNIK"	"[R].vTMFLTDSNNIk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"921.01929"	"1841.03130"	"1841.02429"	"3.81"	"0.00350"	"9/106"	"9"	"106"	"244353.307556152"	"HCD"	"MS2"	"0"	"26.9"	"100.000"	"60.0504"	"18974"	"18974"	"18948"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.1"	""	"34.1"	""	"36.7"	""	"37.2"	""	"56.6"	"46.4"	""	"999"	"21"	"36.000"	"29.000"	"0.433047456941229"	"15"	"0.0006037"	"0.004907"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMYSASKPLK"	"[R].eMYSASkPLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.36456"	"1841.07914"	"1841.08097"	"-0.99"	"-0.00061"	"10/88"	"10"	"88"	"13899108.9659424"	"HCD"	"MS2"	"10.48505"	"561.7"	"58.317"	"34.9535"	"8706"	"8706"	"8686"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1220.7"	""	"1047.9"	""	"996.7"	""	"410.4"	""	"772.9"	"851.6"	""	"695"	"9"	"35.000"	"28.000"	"4.13004524034363"	"13"	"0"	"8.816E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMYSASKPLK"	"[R].eMYSASkPLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.36475"	"1841.07969"	"1841.08097"	"-0.70"	"-0.00043"	"10/88"	"10"	"88"	"9202776.78540039"	"HCD"	"MS2"	"7.192284"	"420.6"	"70.442"	"35.0314"	"8781"	"8781"	"8762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"935.2"	""	"754.2"	""	"718.1"	""	"337.3"	"2.2"	"582.3"	"634.8"	""	"685"	"10"	"35.000"	"28.000"	"3.425"	"13"	"0"	"8.201E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPPVSGSIIWAK"	"[R].dLPPVSGSIIWAk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"921.04950"	"1841.09172"	"1841.09369"	"-1.07"	"-0.00098"	"8/110"	"8"	"110"	"552677.164245605"	"HCD"	"MS2"	"12.44616"	"36.6"	"100.000"	"66.7890"	"21725"	"21725"	"21699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.7"	""	"47.5"	""	"44.8"	""	"64.9"	""	"78.0"	"71.5"	""	"571"	"33"	"34.000"	"27.000"	"0.013446402668633"	"17"	"0.000523"	"0.003152"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPPVSGSIIWAK"	"[R].dLPPVSGSIIWAk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"614.36884"	"1841.09195"	"1841.09369"	"-0.94"	"-0.00058"	"9/110"	"9"	"110"	"1744274.11352539"	"HCD"	"MS2"	"7.501144"	"56.7"	"100.000"	"66.7805"	"21669"	"21669"	"21641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.2"	""	"81.7"	""	"80.0"	""	"87.9"	"1.1"	"105.1"	"92.8"	""	"577"	"45"	"34.000"	"27.000"	"0.000973073885480837"	"17"	"0"	"0.0001781"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPPVSGSIIWAK"	"[R].dLPPVSGSIIWAk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.36884"	"1841.09195"	"1841.09369"	"-0.94"	"-0.00058"	"11/110"	"11"	"110"	"3260167.63806152"	"HCD"	"MS2"	"24.27225"	"98.4"	"100.000"	"66.7129"	"21694"	"21694"	"21667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.8"	""	"122.7"	""	"135.3"	""	"153.8"	"1.1"	"173.8"	"182.3"	""	"577"	"30"	"34.000"	"27.000"	"0.0281932938245751"	"14"	"0.0001308"	"0.000213"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPPVSGSIIWAK"	"[R].dLPPVSGSIIWAk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"614.36902"	"1841.09250"	"1841.09369"	"-0.65"	"-0.00040"	"11/110"	"11"	"110"	"2342518.95849609"	"HCD"	"MS2"	"12.61504"	"66.9"	"100.000"	"67.2890"	"21921"	"21921"	"21906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.3"	""	"74.9"	""	"82.6"	""	"114.5"	""	"134.7"	"128.9"	""	"560"	"34"	"34.000"	"27.000"	"0.0101896210115618"	"15"	"0"	"5.79E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPPVSGSIIWAK"	"[R].dLPPVSGSIIWAk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.36914"	"1841.09287"	"1841.09369"	"-0.45"	"-0.00027"	"12/110"	"12"	"110"	"2118929.80224609"	"HCD"	"MS2"	"29.92692"	"67.6"	"100.000"	"67.6327"	"22010"	"22010"	"21985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.1"	""	"85.1"	""	"95.8"	""	"101.2"	""	"119.0"	"132.2"	""	"558"	"23"	"34.000"	"27.000"	"0.126649711045407"	"14"	"0.0001889"	"0.0008702"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPPVSGSIIWAK"	"[R].dLPPVSGSIIWAk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"921.05084"	"1841.09441"	"1841.09369"	"0.39"	"0.00036"	"13/110"	"13"	"110"	"521014.293457031"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"66.9372"	"21733"	"21733"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.2"	""	"40.2"	""	"55.3"	""	"63.3"	""	"71.8"	"77.9"	""	"561"	"41"	"34.000"	"27.000"	"0.00239294581981934"	"18"	"0.0001889"	"0.0008595"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPPVSGSIIWAK"	"[R].dLPPVSGSIIWAk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.37823"	"1841.12015"	"1841.09369"	"14.37"	"0.00882"	"9/110"	"9"	"110"	"2306842.37121582"	"HCD"	"MS2"	"60.13332"	"68.1"	"100.000"	"67.4183"	"21923"	"21923"	"21905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.8"	""	"91.1"	""	"96.0"	""	"118.0"	""	"141.0"	"116.9"	""	"398"	"51"	"32.000"	"25.000"	"0.000165520990449432"	"16"	"0.0001308"	"0.0002061"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLVGVNLSLDGVK"	"[K].lGLVGVNLSLDGVk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"921.57513"	"1842.14299"	"1842.14646"	"-1.88"	"-0.00173"	"12/122"	"12"	"122"	"253006.061340332"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"74.2961"	"24781"	"24781"	"24751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.6"	""	"25.9"	""	"26.2"	""	"32.3"	""	"30.0"	"41.4"	""	"297"	"42"	"31.000"	"24.000"	"0.00101560879621292"	"15"	"0.0001889"	"0.0003953"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLVGVNLSLDGVK"	"[K].lGLVGVNLSLDGVk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.71967"	"1842.14444"	"1842.14646"	"-1.09"	"-0.00067"	"15/122"	"15"	"122"	"1609815.95471191"	"HCD"	"MS2"	"10.82509"	"57.6"	"100.000"	"74.2823"	"24775"	"24775"	"24751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.4"	""	"76.1"	""	"97.8"	""	"91.9"	"0.4"	"98.0"	"106.8"	""	"296"	"51"	"31.000"	"24.000"	"0.000130997110254964"	"16"	"0"	"3.875E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLVGVNLSLDGVK"	"[K].lGLVGVNLSLDGVk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.72028"	"1842.14627"	"1842.14646"	"-0.10"	"-0.00006"	"16/122"	"16"	"122"	"1662239.71032715"	"HCD"	"MS2"	"32.95396"	"63.3"	"100.000"	"74.2550"	"24712"	"24712"	"24689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.9"	""	"85.8"	""	"112.7"	""	"100.0"	""	"100.6"	"114.6"	""	"299"	"58"	"31.000"	"24.000"	"2.22659481117782E-05"	"16"	"0"	"2.531E-05"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLVGVNLSLDGVK"	"[K].lGLVGVNLSLDGVk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"921.57739"	"1842.14751"	"1842.14646"	"0.57"	"0.00053"	"13/122"	"13"	"122"	"247654.226013184"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"74.3403"	"24747"	"24747"	"24721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.3"	""	"28.4"	""	"35.7"	""	"34.7"	""	"34.6"	"46.3"	""	"282"	"49"	"31.000"	"24.000"	"0.000169129401744062"	"19"	"0"	"0.0001183"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIKPAPETAK"	"[R].vTIkPAPETAk.[K]"	"N-Term(TMT6plex); K4(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.72620"	"1842.16404"	"1842.16675"	"-1.47"	"-0.00090"	"8/108"	"8"	"108"	"35364548.5189209"	"HCD"	"MS2"	"0"	"1168.0"	"56.633"	"34.0475"	"8336"	"8336"	"8319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2244.7"	""	"1831.7"	""	"1279.9"	""	"1943.3"	""	"1975.6"	"1784.6"	""	"197"	"8"	"29.000"	"22.000"	"1.68049115316808"	"13"	"0.0001889"	"0.000393"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIKPAPETAK"	"[R].vTIkPAPETAk.[K]"	"N-Term(TMT6plex); K4(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.72644"	"1842.16477"	"1842.16675"	"-1.07"	"-0.00066"	"13/108"	"13"	"108"	"21888131.7493896"	"HCD"	"MS2"	"4.430711"	"1289.8"	"100.000"	"34.0680"	"8389"	"8389"	"8380"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2643.2"	""	"2001.4"	""	"1396.7"	""	"2129.0"	"4.5"	"2113.9"	"1895.1"	""	"192"	"15"	"29.000"	"22.000"	"0.273068266315"	"13"	"0"	"0.0001037"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIKPAPETAK"	"[R].vTIkPAPETAk.[K]"	"N-Term(TMT6plex); K4(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.72675"	"1842.16568"	"1842.16675"	"-0.58"	"-0.00035"	"8/108"	"8"	"108"	"4162933.72796631"	"HCD"	"MS2"	"46.28463"	"252.6"	"100.000"	"34.4324"	"8536"	"8536"	"8508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"464.1"	""	"368.0"	""	"318.6"	""	"387.2"	""	"426.3"	"424.7"	""	"193"	"7"	"29.000"	"22.000"	"1.75601132855864"	"13"	"7.476E-05"	"0.0002019"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIKPAPETAK"	"[R].vTIkPAPETAk.[K]"	"N-Term(TMT6plex); K4(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.72705"	"1842.16660"	"1842.16675"	"-0.08"	"-0.00005"	"4/108"	"4"	"108"	"2838046.10043335"	"HCD"	"MS2"	"30.65674"	"187.4"	"100.000"	"34.4373"	"8495"	"8495"	"8467"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.9"	""	"282.2"	""	"237.1"	""	"292.4"	""	"329.9"	"310.2"	""	"201"	"5"	"30.000"	"23.000"	"2.95233790022134"	"13"	"0.0001308"	"0.0002189"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIYNPTSGEFLGR"	"[K].lFIYNPTSGEFLGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"615.00208"	"1842.99167"	"1842.99515"	"-1.89"	"-0.00116"	"13/128"	"13"	"128"	"1755823.91912842"	"HCD"	"MS2"	"3.084624"	"28.9"	"100.000"	"72.2206"	"23882"	"23882"	"23857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.2"	""	"39.5"	""	"42.4"	""	"46.8"	""	"57.0"	"49.0"	""	"1130"	"39"	"37.000"	"30.000"	"0.00796248171108361"	"15"	"0.0002277"	"0.001192"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIYNPTSGEFLGR"	"[K].lFIYNPTSGEFLGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"615.00244"	"1842.99277"	"1842.99515"	"-1.29"	"-0.00079"	"16/128"	"16"	"128"	"2137409.1940918"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"72.1936"	"23922"	"23922"	"23903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.1"	""	"51.9"	""	"42.4"	""	"52.5"	""	"49.9"	"63.0"	""	"1107"	"38"	"37.000"	"30.000"	"0.00961872758712779"	"17"	"0.0001308"	"0.0002349"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIYNPTSGEFLGR"	"[K].lFIYNPTSGEFLGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"922.00018"	"1842.99309"	"1842.99515"	"-1.12"	"-0.00103"	"11/128"	"11"	"128"	"209423.885070801"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"72.4933"	"24045"	"24045"	"24015"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.6"	""	"15.7"	""	"17.7"	""	"24.9"	""	"28.5"	"28.0"	""	"1107"	"14"	"37.000"	"30.000"	"2.00963703315251"	"17"	"0.0001889"	"0.0008404"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIYNPTSGEFLGR"	"[K].lFIYNPTSGEFLGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"922.00073"	"1842.99419"	"1842.99515"	"-0.52"	"-0.00048"	"11/128"	"11"	"128"	"980170.269226074"	"HCD"	"MS2"	"0"	"48.0"	"100.000"	"72.1292"	"23896"	"23896"	"23871"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.3"	""	"61.7"	""	"65.4"	""	"82.5"	""	"88.3"	"99.5"	""	"1117"	"36"	"37.000"	"30.000"	"0.0135214472260216"	"15"	"0.0001889"	"0.0004486"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIYNPTSGEFLGR"	"[K].lFIYNPTSGEFLGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"922.00079"	"1842.99431"	"1842.99515"	"-0.46"	"-0.00042"	"13/128"	"13"	"128"	"848373.604125977"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"72.1859"	"23868"	"23868"	"23841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.5"	""	"56.7"	""	"59.4"	""	"65.5"	"0.5"	"75.6"	"78.4"	""	"1117"	"62"	"37.000"	"30.000"	"3.9086175476727E-05"	"24"	"0"	"2.067E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIYNPTSGEFLGR"	"[K].lFIYNPTSGEFLGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"Q63377"	"Sodium/potassium-transporting ATPase subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Atp1b3 PE=2 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"922.00134"	"1842.99541"	"1842.99515"	"0.14"	"0.00013"	"10/128"	"10"	"128"	"321123.310852051"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"72.4949"	"23994"	"23994"	"23969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.3"	""	"26.0"	""	"26.9"	""	"26.0"	""	"35.4"	"45.1"	""	"1106"	"33"	"37.000"	"30.000"	"0.0277156540195881"	"22"	"0.0001859"	"0.000354"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDRK"	"[R].yLAEFATGNDRk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"1"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"615.00867"	"1843.01145"	"1843.01142"	"0.02"	"0.00001"	"11/106"	"11"	"106"	"17231618.4233398"	"HCD"	"MS2"	"37.58171"	"497.3"	"50.617"	"39.3801"	"10523"	"10523"	"10502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"920.9"	""	"861.2"	""	"914.1"	""	"627.1"	""	"642.4"	"722.7"	""	"1041"	"26"	"37.000"	"30.000"	"0.132257629323841"	"19"	"0"	"0.0001075"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVALEELQDLK"	"[R].vQVALEELQDLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"922.04932"	"1843.09136"	"1843.09409"	"-1.48"	"-0.00136"	"16/116"	"16"	"116"	"296882.791870117"	"HCD"	"MS2"	"0"	"24.1"	"100.000"	"76.4832"	"25667"	"25667"	"25647"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.6"	""	"27.8"	""	"32.3"	""	"41.2"	""	"48.3"	"45.7"	""	"651"	"60"	"35.000"	"28.000"	"3.255E-05"	"17"	"0"	"1.782E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQVALEELQDLK"	"[R].vQVALEELQDLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"922.04993"	"1843.09258"	"1843.09409"	"-0.82"	"-0.00075"	"16/116"	"16"	"116"	"266265.171020508"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"76.5464"	"25642"	"25642"	"25617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.0"	""	"23.6"	""	"27.4"	""	"40.5"	"1.4"	"43.9"	"49.8"	""	"642"	"53"	"35.000"	"28.000"	"0.00017968219007993"	"16"	"0"	"3.095E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDAMHGVVGPYVK"	"[R].iDAMHGVVGPYVk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.35553"	"1844.05204"	"1844.05045"	"0.86"	"0.00053"	"8/96"	"8"	"96"	"7410044.58532715"	"HCD"	"MS2"	"6.697118"	"212.6"	"100.000"	"46.5439"	"13481"	"13481"	"13459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"365.0"	""	"313.8"	""	"304.6"	""	"265.9"	""	"331.9"	"431.3"	""	"906"	"38"	"36.000"	"29.000"	"0.0073299025705231"	"15"	"0"	"1.35E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PGKPVLHYFDGR"	"[M].pGkPVLHYFDGR.[G]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904; P46418"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"461.76929"	"1844.05532"	"1844.05831"	"-1.62"	"-0.00075"	"9/106"	"9"	"106"	"29463393.711792"	"HCD"	"MS2"	"18.20263"	"511.0"	"71.477"	"37.2158"	"9678"	"9678"	"9654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"675.7"	""	"573.9"	""	"667.5"	""	"876.9"	"2.4"	"952.5"	"1098.6"	""	"924"	"15"	"36.000"	"29.000"	"1.38880725181424"	"13"	"0.0001889"	"0.0005044"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PGKPVLHYFDGR"	"[M].pGkPVLHYFDGR.[G]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904; P46418"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"461.76956"	"1844.05642"	"1844.05831"	"-1.03"	"-0.00047"	"8/106"	"8"	"106"	"23563708.8925171"	"HCD"	"MS2"	"15.90645"	"484.7"	"91.798"	"37.0949"	"9585"	"9585"	"9562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"629.6"	""	"552.1"	""	"627.9"	""	"835.5"	"3.0"	"907.0"	"1043.7"	""	"907"	"27"	"36.000"	"29.000"	"0.0830954590545344"	"14"	"0.0001308"	"0.0002137"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PGKPVLHYFDGR"	"[M].pGkPVLHYFDGR.[G]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904; P46418"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.35706"	"1844.05661"	"1844.05831"	"-0.92"	"-0.00057"	"8/106"	"8"	"106"	"4344252.22473145"	"HCD"	"MS2"	"7.317492"	"258.0"	"100.000"	"37.2851"	"9663"	"9663"	"9640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"349.0"	""	"316.1"	""	"360.5"	""	"428.5"	"9.8"	"459.8"	"521.4"	""	"905"	"12"	"36.000"	"29.000"	"2.55633981102567"	"13"	"0"	"1.619E-05"	"1.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDAMHGVVGPYVK"	"[R].iDAMHGVVGPYVk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.35712"	"1844.05680"	"1844.05045"	"3.44"	"0.00212"	"8/96"	"8"	"96"	"5352563.44378662"	"HCD"	"MS2"	"47.00054"	"173.4"	"100.000"	"46.2248"	"13303"	"13303"	"13272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.8"	""	"246.1"	""	"253.3"	""	"216.5"	"1.0"	"293.0"	"345.6"	""	"905"	"38"	"36.000"	"29.000"	"0.00761410012634386"	"15"	"0"	"1.258E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PGKPVLHYFDGR"	"[M].pGkPVLHYFDGR.[G]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"2"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904; P46418"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-5 OS=Rattus norvegicus OX=10116 GN=Gsta5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.35724"	"1844.05716"	"1844.05831"	"-0.62"	"-0.00038"	"10/106"	"10"	"106"	"4025591.45684814"	"HCD"	"MS2"	"0"	"241.2"	"100.000"	"37.3990"	"9753"	"9753"	"9729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"334.7"	""	"293.7"	""	"333.2"	""	"401.7"	""	"449.4"	"475.8"	""	"908"	"13"	"36.000"	"29.000"	"2.10404901560275"	"13"	"0"	"8.165E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKLPGQPPASMGR"	"[R].fkLPGQPPASMGR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.35846"	"1844.06083"	"1844.06168"	"-0.46"	"-0.00028"	"10/118"	"10"	"118"	"20599994.0296631"	"HCD"	"MS2"	"22.36152"	"515.6"	"58.896"	"40.3219"	"10950"	"10950"	"10925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"957.1"	""	"793.3"	""	"777.8"	""	"553.0"	""	"860.5"	"933.9"	""	"888"	"20"	"36.000"	"29.000"	"0.464925075334599"	"14"	"0.0001308"	"0.0002148"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVSAQWVAEALK"	"[R].aLVSAQWVAEALk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"922.55505"	"1844.10283"	"1844.10459"	"-0.95"	"-0.00088"	"18/122"	"18"	"122"	"740666.250366211"	"HCD"	"MS2"	"9.870381"	"53.5"	"100.000"	"76.2238"	"25511"	"25511"	"25489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.9"	""	"62.8"	""	"82.7"	""	"86.7"	""	"93.8"	"99.9"	""	"635"	"52"	"35.000"	"28.000"	"0.00020784698526636"	"22"	"0"	"1.412E-05"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVSAQWVAEALK"	"[R].aLVSAQWVAEALk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"615.37250"	"1844.10294"	"1844.10459"	"-0.90"	"-0.00055"	"15/122"	"15"	"122"	"4901049.99938965"	"HCD"	"MS2"	"5.670596"	"101.8"	"100.000"	"76.2040"	"25554"	"25554"	"25535"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.2"	""	"132.6"	""	"162.6"	""	"156.8"	"0.5"	"178.1"	"182.9"	""	"635"	"70"	"35.000"	"28.000"	"3.30935783832374E-06"	"26"	"0"	"5.486E-06"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVSAQWVAEALK"	"[R].aLVSAQWVAEALk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.9053"	"0.0000"	"1"	"1"	"1"	"922.55536"	"1844.10344"	"1844.10459"	"-0.62"	"-0.00057"	"22/122"	"22"	"122"	"711347.889709473"	"HCD"	"MS2"	"8.237663"	"49.7"	"100.000"	"76.1764"	"25543"	"25543"	"25519"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.7"	""	"65.3"	""	"71.5"	""	"86.9"	"0.3"	"83.5"	"93.0"	""	"628"	"95"	"34.000"	"27.000"	"1.02548579302113E-08"	""	"0"	"1.982E-07"	"1.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVSAQWVAEALK"	"[R].aLVSAQWVAEALk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.8615"	"0.0000"	"1"	"1"	"1"	"615.37274"	"1844.10367"	"1844.10459"	"-0.50"	"-0.00031"	"15/122"	"15"	"122"	"4826304.7220459"	"HCD"	"MS2"	"5.570256"	"105.6"	"100.000"	"76.2560"	"25524"	"25524"	"25505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.5"	""	"132.7"	""	"148.0"	""	"181.5"	"2.1"	"174.0"	"211.0"	""	"626"	"65"	"34.000"	"27.000"	"1.04122440181023E-05"	"25"	"0"	"7.542E-06"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVmk.[V]"	"N-Term(TMT6plex); M13(Oxidation); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8806"	"0.0000"	"1"	"1"	"1"	"615.37347"	"1844.10587"	"1844.10796"	"-1.13"	"-0.00070"	"8/114"	"8"	"114"	"8132914.878479"	"HCD"	"MS2"	"9.988332"	"199.6"	"100.000"	"51.8426"	"15641"	"15641"	"15622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.9"	""	"238.5"	""	"283.2"	""	"396.7"	""	"365.5"	"398.9"	""	"623"	"67"	"34.000"	"27.000"	"5.61640026277756E-06"	"25"	"0"	"2.586E-06"	"1.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVmk.[V]"	"N-Term(TMT6plex); M13(Oxidation); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8228"	"0.0000"	"1"	"1"	"1"	"922.55743"	"1844.10759"	"1844.10796"	"-0.20"	"-0.00019"	"13/114"	"13"	"114"	"668260.299194336"	"HCD"	"MS2"	"0"	"46.0"	"100.000"	"51.6312"	"15505"	"15505"	"15474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.8"	""	"53.9"	""	"61.5"	""	"103.3"	"1.8"	"76.8"	"90.9"	""	"597"	"79"	"34.000"	"27.000"	"3.91691669857232E-07"	""	"0"	"2.296E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVmk.[V]"	"N-Term(TMT6plex); M13(Oxidation); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"615.37421"	"1844.10807"	"1844.10796"	"0.06"	"0.00003"	"8/114"	"8"	"114"	"5463831.7746582"	"HCD"	"MS2"	"6.886993"	"137.0"	"100.000"	"51.6844"	"15526"	"15526"	"15506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.8"	""	"161.6"	""	"196.7"	""	"274.3"	""	"246.6"	"274.7"	""	"596"	"63"	"34.000"	"27.000"	"1.53538136085363E-05"	"23"	"0"	"3.058E-06"	"1.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPALATGNVVVMK"	"[K].lGPALATGNVVVmk.[V]"	"N-Term(TMT6plex); M13(Oxidation); K14(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9863"	"0.0000"	"1"	"1"	"1"	"922.55804"	"1844.10881"	"1844.10796"	"0.46"	"0.00043"	"12/114"	"12"	"114"	"598353.021728516"	"HCD"	"MS2"	"0"	"42.4"	"100.000"	"51.8265"	"15635"	"15635"	"15606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.6"	""	"51.6"	""	"60.3"	""	"97.1"	""	"71.0"	"89.9"	""	"594"	"73"	"34.000"	"27.000"	"1.44795961560706E-06"	"18"	"0"	"2.737E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALAIAQELGSK"	"[K].tALALAIAQELGSk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"615.37903"	"1844.12253"	"1844.12572"	"-1.73"	"-0.00106"	"13/138"	"13"	"138"	"1371950.97509766"	"HCD"	"MS2"	"6.868652"	"35.0"	"100.000"	"80.4955"	"27298"	"27298"	"27279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.2"	""	"43.3"	""	"47.4"	""	"59.5"	""	"71.8"	"64.7"	""	"509"	"43"	"34.000"	"27.000"	"0.00128732376479792"	"16"	"0"	"1.716E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALAIAQELGSK"	"[K].tALALAIAQELGSk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8916"	"0.0000"	"1"	"1"	"1"	"922.56543"	"1844.12358"	"1844.12572"	"-1.16"	"-0.00107"	"20/138"	"20"	"138"	"260756.249389648"	"HCD"	"MS2"	"19.60085"	"18.4"	"100.000"	"80.5285"	"27261"	"27261"	"27233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.4"	""	"18.0"	""	"24.4"	""	"33.4"	""	"40.4"	"33.3"	""	"505"	"83"	"34.000"	"27.000"	"1.18375378991679E-07"	"27"	"0"	"1.25E-06"	"1.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALAIAQELGSK"	"[K].tALALAIAQELGSk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"615.37958"	"1844.12418"	"1844.12572"	"-0.84"	"-0.00051"	"14/138"	"14"	"138"	"377288.303527832"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"80.8232"	"27432"	"27432"	"27406"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.0"	""	"18.4"	""	"23.0"	""	"24.9"	""	"35.0"	"33.3"	""	"501"	"42"	"33.000"	"26.000"	"0.0016896927093833"	"17"	"0"	"7.805E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALAIAQELGSK"	"[K].tALALAIAQELGSk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9012"	"0.0000"	"1"	"1"	"1"	"922.56586"	"1844.12444"	"1844.12572"	"-0.70"	"-0.00064"	"18/138"	"18"	"138"	"234931.649475098"	"HCD"	"MS2"	"15.52228"	"16.2"	"100.000"	"80.5185"	"27308"	"27308"	"27279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.6"	""	"18.6"	""	"24.6"	""	"28.5"	""	"29.2"	"31.1"	""	"501"	"81"	"33.000"	"26.000"	"2.04553884025328E-07"	"25"	"0"	"1.935E-06"	"1.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALAIAQELGSK"	"[K].tALALAIAQELGSk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"615.37970"	"1844.12455"	"1844.12572"	"-0.64"	"-0.00039"	"13/138"	"13"	"138"	"1066707.58398438"	"HCD"	"MS2"	"20.08467"	"28.6"	"100.000"	"80.4800"	"27241"	"27241"	"27217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.2"	""	"37.4"	""	"39.2"	""	"46.5"	""	"52.9"	"56.9"	""	"487"	"43"	"33.000"	"26.000"	"0.00133198386964682"	"18"	"0"	"2.013E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALALAIAQELGSK"	"[K].tALALAIAQELGSk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"615.37976"	"1844.12473"	"1844.12572"	"-0.54"	"-0.00033"	"14/138"	"14"	"138"	"577486.705810547"	"HCD"	"MS2"	"14.1076"	"19.8"	"100.000"	"80.7892"	"27367"	"27367"	"27344"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.7"	""	"25.1"	""	"26.5"	""	"35.8"	""	"39.9"	"39.1"	""	"487"	"36"	"33.000"	"26.000"	"0.00588164713187343"	"16"	"0"	"4.567E-05"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEALKPLGVK"	"[R].sDEALkPLGVk.[V]"	"N-Term(TMT6plex); K6(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.38635"	"1844.14450"	"1844.14601"	"-0.82"	"-0.00050"	"14/94"	"14"	"94"	"51298602.829834"	"HCD"	"MS2"	"11.39126"	"810.9"	"25.453"	"38.9079"	"10329"	"10329"	"10310"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1272.2"	""	"955.0"	""	"1184.3"	""	"1370.6"	"2.3"	"1281.3"	"1608.0"	""	"323"	"19"	"32.000"	"25.000"	"0.226554413286756"	"14"	"7.476E-05"	"0.0001845"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEALKPLGVK"	"[R].sDEALkPLGVk.[V]"	"N-Term(TMT6plex); K6(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.38660"	"1844.14524"	"1844.14601"	"-0.42"	"-0.00026"	"10/94"	"10"	"94"	"37721029.0081177"	"HCD"	"MS2"	"20.26166"	"1526.4"	"61.342"	"38.9756"	"10400"	"10400"	"10382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2394.3"	""	"1848.1"	""	"2183.5"	""	"2553.0"	""	"2392.2"	"3080.2"	""	"318"	"19"	"32.000"	"25.000"	"0.180466719691898"	"14"	"0"	"9.227E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVISAIPPILTAK"	"[K].yVISAIPPILTAk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.39294"	"1844.16428"	"1844.16613"	"-1.00"	"-0.00062"	"13/110"	"13"	"110"	"2397176.06848145"	"HCD"	"MS2"	"55.67813"	"49.1"	"100.000"	"75.8658"	"25369"	"25369"	"25345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.1"	""	"67.0"	""	"58.9"	""	"78.7"	"3.6"	"96.1"	"108.0"	""	"203"	"15"	"30.000"	"23.000"	"0.353562374761552"	"13"	"0.0001889"	"0.0004212"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTPCAQAAFQK"	"[K].eFTPcAQAAFQk.[V]"	"N-Term(TMT6plex); C5(Methylthio); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"615.65240"	"1844.94266"	"1844.94393"	"-0.69"	"-0.00042"	"9/102"	"9"	"102"	"12972647.6425781"	"HCD"	"MS2"	"18.48743"	"297.8"	"87.180"	"57.2713"	"17789"	"17789"	"17771"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"358.4"	""	"336.2"	""	"366.0"	""	"693.0"	"2.0"	"605.9"	"462.4"	""	"952"	"45"	"36.000"	"29.000"	"0.00140154469768821"	"22"	"0"	"1.825E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTPCAQAAFQK"	"[K].eFTPcAQAAFQk.[V]"	"N-Term(TMT6plex); C5(Methylthio); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"615.65265"	"1844.94339"	"1844.94393"	"-0.29"	"-0.00018"	"13/102"	"13"	"102"	"11700288.3311157"	"HCD"	"MS2"	"38.23862"	"296.5"	"100.000"	"57.4521"	"17917"	"17917"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.9"	""	"326.3"	""	"344.0"	""	"694.5"	"1.5"	"602.1"	"488.3"	""	"958"	"37"	"36.000"	"29.000"	"0.00893995871909807"	"19"	"0"	"9.134E-06"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTPCAQAAFQK"	"[K].eFTPcAQAAFQk.[V]"	"N-Term(TMT6plex); C5(Methylthio); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"922.97552"	"1844.94377"	"1844.94393"	"-0.09"	"-0.00008"	"11/102"	"11"	"102"	"2347793.55175781"	"HCD"	"MS2"	"5.791368"	"188.4"	"100.000"	"57.2991"	"17801"	"17801"	"17771"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"255.5"	""	"202.7"	""	"224.3"	""	"459.7"	"5.1"	"374.3"	"263.1"	""	"958"	"62"	"36.000"	"29.000"	"2.93992000473937E-05"	"22"	"0"	"1.466E-06"	"1.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTPCAQAAFQK"	"[K].eFTPcAQAAFQk.[V]"	"N-Term(TMT6plex); C5(Methylthio); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"922.97589"	"1844.94451"	"1844.94393"	"0.31"	"0.00029"	"18/102"	"18"	"102"	"2608546.33679199"	"HCD"	"MS2"	"9.109881"	"208.9"	"100.000"	"57.4912"	"17933"	"17933"	"17909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"284.1"	""	"229.9"	""	"241.1"	""	"495.7"	"4.4"	"410.9"	"313.6"	""	"960"	"61"	"36.000"	"29.000"	"4.2387835220091E-05"	"20"	"0"	"1.785E-06"	"1.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGVSVSSDAFFPFR"	"[K].lSGVSVSSDAFFPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"922.98956"	"1844.97185"	"1844.97442"	"-1.39"	"-0.00128"	"15/126"	"15"	"126"	"515400.997680664"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"75.4110"	"25184"	"25184"	"25153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.0"	""	"40.7"	""	"37.0"	""	"40.9"	""	"48.4"	"45.4"	""	"1101"	"57"	"37.000"	"30.000"	"0.000102036915868985"	"16"	"0"	"4.801E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGVSVSSDAFFPFR"	"[K].lSGVSVSSDAFFPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"922.98962"	"1844.97197"	"1844.97442"	"-1.32"	"-0.00122"	"21/126"	"21"	"126"	"738161.72442627"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"75.4108"	"25235"	"25235"	"25215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.6"	""	"63.6"	""	"66.5"	""	"61.4"	""	"60.5"	"69.1"	""	"1101"	"45"	"37.000"	"30.000"	"0.00193534022510828"	"15"	"0"	"7.292E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGVSVSSDAFFPFR"	"[K].lSGVSVSSDAFFPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"615.66229"	"1844.97232"	"1844.97442"	"-1.13"	"-0.00070"	"15/126"	"15"	"126"	"2423053.8614502"	"HCD"	"MS2"	"17.15595"	"23.3"	"100.000"	"75.4566"	"25254"	"25254"	"25231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.8"	""	"29.2"	""	"37.3"	""	"36.1"	""	"40.2"	"53.2"	""	"1103"	"76"	"37.000"	"30.000"	"1.54363819777835E-06"	"21"	"0"	"3.459E-06"	"1.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGVSVSSDAFFPFR"	"[K].lSGVSVSSDAFFPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"615.66241"	"1844.97269"	"1844.97442"	"-0.93"	"-0.00057"	"13/126"	"13"	"126"	"1881862.48278809"	"HCD"	"MS2"	"5.845409"	"22.0"	"100.000"	"75.4710"	"25208"	"25208"	"25185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.9"	""	"29.2"	""	"39.3"	""	"32.1"	""	"37.8"	"40.6"	""	"1103"	"60"	"37.000"	"30.000"	"5.46443817608361E-05"	"18"	"0"	"8.451E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGVSVSSDAFFPFR"	"[K].lSGVSVSSDAFFPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"615.66260"	"1844.97324"	"1844.97442"	"-0.64"	"-0.00039"	"15/126"	"15"	"126"	"1970444.32147217"	"HCD"	"MS2"	"27.09011"	"37.4"	"100.000"	"75.7785"	"25333"	"25333"	"25313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.4"	""	"51.3"	""	"53.8"	""	"62.8"	""	"65.1"	"85.6"	""	"1112"	"22"	"37.000"	"30.000"	"0.327397072377707"	"19"	"0.0001308"	"0.0002743"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGVSVSSDAFFPFR"	"[K].lSGVSVSSDAFFPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"922.99048"	"1844.97368"	"1844.97442"	"-0.40"	"-0.00037"	"15/126"	"15"	"126"	"661619.848205566"	"HCD"	"MS2"	"3.645834"	"34.3"	"100.000"	"75.7196"	"25361"	"25361"	"25343"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.3"	""	"49.9"	""	"48.6"	""	"65.1"	"0.5"	"60.7"	"56.4"	""	"1112"	"51"	"37.000"	"30.000"	"0.00040557837570154"	"16"	"0"	"5.261E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGVSVSSDAFFPFR"	"[K].lSGVSVSSDAFFPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.66296"	"1844.97434"	"1844.97442"	"-0.04"	"-0.00003"	"15/126"	"15"	"126"	"2305461.36657715"	"HCD"	"MS2"	"43.6141"	"41.7"	"100.000"	"75.7659"	"25380"	"25380"	"25359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.1"	""	"51.9"	""	"49.8"	""	"66.3"	"2.0"	"82.1"	"97.4"	""	"1114"	"24"	"37.000"	"30.000"	"0.198086644442925"	"14"	"0"	"0.0001321"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGVSVSSDAFFPFR"	"[K].lSGVSVSSDAFFPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"922.99103"	"1844.97478"	"1844.97442"	"0.20"	"0.00018"	"10/126"	"10"	"126"	"689050.424377441"	"HCD"	"MS2"	"3.437036"	"39.8"	"100.000"	"75.7298"	"25314"	"25314"	"25297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.0"	""	"65.0"	""	"62.9"	""	"63.2"	""	"65.4"	"76.8"	""	"1125"	"44"	"37.000"	"30.000"	"0.00213856535430316"	"16"	"0.0001308"	"0.0002453"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"3"	"4"	"P85108; Q4QRB4; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"923.00244"	"1844.99761"	"1844.99892"	"-0.71"	"-0.00065"	"13/128"	"13"	"128"	"389144.933349609"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"63.8073"	"20455"	"20455"	"20425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.5"	""	"32.2"	""	"28.6"	""	"29.1"	""	"37.1"	"41.9"	""	"1124"	"55"	"37.000"	"30.000"	"0.000193524661088996"	"24"	"0"	"5.345E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"3"	"4"	"P85108; Q4QRB4; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"923.00299"	"1844.99870"	"1844.99892"	"-0.11"	"-0.00011"	"6/128"	"6"	"128"	"393609.943786621"	"HCD"	"MS2"	"0"	"39.9"	"100.000"	"63.9346"	"20560"	"20560"	"20531"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.8"	""	"38.2"	""	"41.7"	""	"75.5"	""	"99.2"	"81.8"	""	"1122"	"21"	"37.000"	"30.000"	"0.410169025834198"	"14"	"0.000494"	"0.002705"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSGTCGAQLVTLK"	"[K].ySGTcGAQLVTLk.[V]"	"N-Term(TMT6plex); C5(Methylthio); K13(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"615.67133"	"1844.99942"	"1845.00145"	"-1.10"	"-0.00067"	"13/124"	"13"	"124"	"3384476.20910645"	"HCD"	"MS2"	"12.41601"	"130.0"	"100.000"	"57.2677"	"17842"	"17842"	"17813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.5"	""	"165.9"	""	"191.9"	""	"230.5"	""	"248.7"	"255.5"	""	"1110"	"26"	"37.000"	"30.000"	"0.134367112093858"	"28"	"0"	"0.0001654"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSGTCGAQLVTLK"	"[K].ySGTcGAQLVTLk.[V]"	"N-Term(TMT6plex); C5(Methylthio); K13(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"923.00397"	"1845.00066"	"1845.00145"	"-0.43"	"-0.00039"	"13/124"	"13"	"124"	"965850.018432617"	"HCD"	"MS2"	"17.27317"	"89.2"	"100.000"	"57.2160"	"17767"	"17767"	"17739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.4"	""	"109.7"	""	"112.7"	""	"206.2"	""	"164.4"	"147.6"	""	"1113"	"9"	"37.000"	"30.000"	"7.30239243804187"	"14"	"0.0001889"	"0.0005392"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSGTCGAQLVTLK"	"[K].ySGTcGAQLVTLk.[V]"	"N-Term(TMT6plex); C5(Methylthio); K13(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6486"	"0.0000"	"1"	"1"	"1"	"615.67249"	"1845.00290"	"1845.00145"	"0.79"	"0.00049"	"8/124"	"8"	"124"	"4038382.5725708"	"HCD"	"MS2"	"46.49139"	"137.2"	"100.000"	"57.1030"	"17721"	"17721"	"17691"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.9"	""	"178.8"	""	"194.8"	""	"249.5"	"1.5"	"268.9"	"257.5"	""	"1120"	"37"	"37.000"	"30.000"	"0.0103797770911229"	"28"	"0"	"3.955E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"3"	"4"	"P85108; Q4QRB4; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"615.67529"	"1845.01133"	"1844.99892"	"6.73"	"0.00414"	"13/128"	"13"	"128"	"2150808.33520508"	"HCD"	"MS2"	"30.78831"	"86.0"	"100.000"	"63.6973"	"20463"	"20463"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.9"	""	"91.6"	""	"105.9"	""	"167.3"	"0.4"	"170.8"	"174.0"	""	"1167"	"41"	"37.000"	"30.000"	"0.00463490524961618"	"16"	"0"	"6.097E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"3"	"4"	"P85108; Q4QRB4; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"615.67542"	"1845.01169"	"1844.99892"	"6.92"	"0.00426"	"12/128"	"12"	"128"	"1991052.39105225"	"HCD"	"MS2"	"12.48574"	"72.1"	"100.000"	"63.6760"	"20401"	"20401"	"20377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.0"	""	"79.1"	""	"79.5"	""	"141.1"	"2.2"	"145.4"	"136.1"	""	"1163"	"44"	"37.000"	"30.000"	"0.00221080133960406"	"19"	"0"	"3.17E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSYLTPDLWK"	"[K].tYSYLTPDLWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"615.67633"	"1845.01444"	"1845.01986"	"-2.94"	"-0.00181"	"12/94"	"12"	"94"	"6029269.16540527"	"HCD"	"MS2"	"0"	"170.9"	"100.000"	"66.9363"	"21785"	"21785"	"21763"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.2"	""	"303.5"	""	"309.3"	""	"241.3"	""	"242.5"	"223.7"	""	"1145"	"39"	"37.000"	"30.000"	"0.0072073479825216"	"20"	"0.0001889"	"0.0003771"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSYLTPDLWK"	"[K].tYSYLTPDLWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"615.67676"	"1845.01572"	"1845.01986"	"-2.24"	"-0.00138"	"12/94"	"12"	"94"	"3396308.82928467"	"HCD"	"MS2"	"0"	"98.9"	"100.000"	"67.3269"	"21889"	"21889"	"21877"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.9"	""	"159.4"	""	"171.6"	""	"140.5"	"2.5"	"155.5"	"150.8"	""	"1136"	"35"	"37.000"	"30.000"	"0.0201534005084671"	"22"	"0.0001308"	"0.0002628"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSYLTPDLWK"	"[K].tYSYLTPDLWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"615.67719"	"1845.01700"	"1845.01986"	"-1.55"	"-0.00095"	"11/94"	"11"	"94"	"4862304.4864502"	"HCD"	"MS2"	"16.76414"	"152.9"	"100.000"	"67.0360"	"21773"	"21773"	"21753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"250.4"	""	"254.3"	""	"255.0"	""	"234.6"	""	"230.4"	"219.3"	""	"1139"	"32"	"37.000"	"30.000"	"0.0333805684690739"	"17"	"0.0001889"	"0.0004269"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSYLTPDLWK"	"[K].tYSYLTPDLWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"615.67780"	"1845.01883"	"1845.01986"	"-0.56"	"-0.00034"	"12/94"	"12"	"94"	"3503248.86810303"	"HCD"	"MS2"	"0"	"101.5"	"100.000"	"67.2065"	"21889"	"21889"	"21881"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.9"	""	"161.0"	""	"186.6"	""	"147.9"	"2.3"	"160.0"	"147.0"	""	"1110"	"38"	"37.000"	"30.000"	"0.00975647605747075"	"22"	"0.0001308"	"0.0002598"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSYLTPDLWK"	"[K].tYSYLTPDLWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"923.01361"	"1845.01995"	"1845.01986"	"0.05"	"0.00004"	"8/94"	"8"	"94"	"1700264.99676514"	"HCD"	"MS2"	"0"	"131.1"	"100.000"	"66.8974"	"21769"	"21769"	"21747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.2"	""	"233.7"	""	"253.7"	""	"190.1"	""	"177.8"	"152.9"	""	"1094"	"41"	"37.000"	"30.000"	"0.00441557561546115"	"19"	"0.0001308"	"0.0002432"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSYLTPDLWK"	"[K].tYSYLTPDLWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"923.01373"	"1845.02019"	"1845.01986"	"0.18"	"0.00017"	"16/94"	"16"	"94"	"1383502.91625977"	"HCD"	"MS2"	"0"	"114.5"	"100.000"	"67.1788"	"21878"	"21878"	"21869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.1"	""	"192.9"	""	"226.0"	""	"178.6"	""	"166.2"	"146.1"	""	"1100"	"52"	"37.000"	"30.000"	"0.000361711810545481"	"19"	"0"	"9.233E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSYLTPDLWK"	"[K].tYSYLTPDLWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"923.01434"	"1845.02141"	"1845.01986"	"0.84"	"0.00078"	"12/94"	"12"	"94"	"1465155.21826172"	"HCD"	"MS2"	"0"	"124.3"	"100.000"	"67.0175"	"21766"	"21766"	"21737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"202.1"	""	"220.6"	""	"247.7"	""	"175.1"	"0.1"	"181.4"	"145.1"	""	"1124"	"30"	"37.000"	"30.000"	"0.051373164170628"	"14"	"0.0001889"	"0.0003782"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSYLTPDLWK"	"[K].tYSYLTPDLWk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"923.01465"	"1845.02202"	"1845.01986"	"1.17"	"0.00108"	"16/94"	"16"	"94"	"1281244.09594727"	"HCD"	"MS2"	"0"	"108.7"	"100.000"	"67.3015"	"21879"	"21879"	"21867"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.4"	""	"177.6"	""	"197.1"	""	"156.5"	""	"156.2"	"153.2"	""	"1117"	"51"	"37.000"	"30.000"	"0.000478655636561161"	"16"	"0"	"9.849E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGPQHIVGSPFK"	"[K].yGGPQHIVGSPFk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.68506"	"1845.04062"	"1845.04232"	"-0.92"	"-0.00057"	"11/112"	"11"	"112"	"8655725.42913818"	"HCD"	"MS2"	"15.53042"	"402.0"	"100.000"	"38.7384"	"10260"	"10260"	"10230"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"550.6"	""	"499.2"	""	"483.6"	""	"651.6"	"1.6"	"763.5"	"864.3"	""	"1015"	"34"	"37.000"	"30.000"	"0.0185967069133775"	"15"	"0"	"2.856E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGPQHIVGSPFK"	"[K].yGGPQHIVGSPFk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.68512"	"1845.04081"	"1845.04232"	"-0.82"	"-0.00051"	"13/112"	"13"	"112"	"8485848.4453125"	"HCD"	"MS2"	"16.86728"	"357.4"	"100.000"	"38.8105"	"10333"	"10333"	"10302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"490.3"	""	"444.5"	""	"476.4"	""	"545.8"	""	"654.4"	"789.4"	""	"1015"	"27"	"37.000"	"30.000"	"0.0923498185744567"	"14"	"0"	"4.895E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLVLNSLAEEK"	"[K].gVDLVLNSLAEEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"615.69531"	"1845.07138"	"1845.07335"	"-1.07"	"-0.00066"	"14/126"	"14"	"126"	"4400185.64562988"	"HCD"	"MS2"	"24.18879"	"121.9"	"100.000"	"68.2406"	"22257"	"22257"	"22234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"188.9"	""	"126.7"	""	"156.8"	""	"225.4"	"0.5"	"208.9"	"247.2"	""	"855"	"48"	"36.000"	"29.000"	"0.000666708694958523"	"19"	"0"	"1.332E-05"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLVLNSLAEEK"	"[K].gVDLVLNSLAEEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"615.69537"	"1845.07157"	"1845.07335"	"-0.97"	"-0.00059"	"15/126"	"15"	"126"	"4091404.20727539"	"HCD"	"MS2"	"38.18979"	"114.2"	"100.000"	"68.0915"	"22248"	"22248"	"22218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.5"	""	"127.8"	""	"155.8"	""	"205.8"	""	"189.8"	"225.5"	""	"855"	"30"	"36.000"	"29.000"	"0.044252327625542"	"17"	"0"	"4.822E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLVLNSLAEEK"	"[K].gVDLVLNSLAEEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8784"	"0.0000"	"1"	"1"	"1"	"923.04034"	"1845.07341"	"1845.07335"	"0.03"	"0.00003"	"11/126"	"11"	"126"	"1572049.37609863"	"HCD"	"MS2"	"24.2713"	"99.9"	"100.000"	"68.3236"	"22291"	"22291"	"22266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.0"	""	"99.2"	""	"106.1"	""	"189.7"	""	"185.4"	"223.0"	""	"869"	"74"	"36.000"	"29.000"	"1.57394582812056E-06"	"26"	"0"	"5.129E-07"	"1.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGADGTPPGFLLK"	"[R].lTGADGTPPGFLLk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"923.04602"	"1845.08476"	"1845.08861"	"-2.08"	"-0.00192"	"14/114"	"14"	"114"	"399988.910949707"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"63.0445"	"20143"	"20143"	"20121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.3"	""	"41.1"	""	"48.9"	""	"56.5"	""	"59.8"	"66.3"	""	"770"	"46"	"35.000"	"28.000"	"0.000938557165071969"	"24"	"0"	"4.52E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGADGTPPGFLLK"	"[R].lTGADGTPPGFLLk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"923.04791"	"1845.08855"	"1845.08861"	"-0.03"	"-0.00003"	"17/114"	"17"	"114"	"763466.656494141"	"HCD"	"MS2"	"19.48928"	"56.0"	"100.000"	"62.9141"	"20143"	"20143"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.1"	""	"85.2"	""	"76.7"	""	"93.1"	"3.4"	"105.9"	"110.3"	""	"732"	"58"	"35.000"	"28.000"	"5.45106154442194E-05"	"23"	"0"	"4.736E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGADGTPPGFLLK"	"[R].lTGADGTPPGFLLk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"923.04889"	"1845.09050"	"1845.08861"	"1.03"	"0.00095"	"13/114"	"13"	"114"	"581453.228820801"	"HCD"	"MS2"	"0"	"47.1"	"100.000"	"62.7496"	"20023"	"20023"	"19993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.7"	""	"62.6"	""	"59.4"	""	"86.0"	"1.4"	"96.3"	"90.9"	""	"702"	"33"	"35.000"	"28.000"	"0.016569412748352"	"19"	"0"	"0.0001456"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVLFLLDLPK"	"[R].eEAVLFLLDLPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"615.70868"	"1845.11148"	"1845.11376"	"-1.23"	"-0.00076"	"12/104"	"12"	"104"	"465402.378417969"	"HCD"	"MS2"	"7.396985"	"11.9"	"100.000"	"93.0280"	"32104"	"32104"	"32099"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.9"	""	"20.5"	""	"15.0"	""	"22.0"	""	"18.0"	"21.3"	""	"536"	"42"	"34.000"	"27.000"	"0.00162231354434049"	"21"	"0"	"2.874E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVLFLLDLPK"	"[R].eEAVLFLLDLPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"923.06000"	"1845.11272"	"1845.11376"	"-0.56"	"-0.00052"	"5/104"	"5"	"104"	"63762.030090332"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"93.1055"	"32131"	"32131"	"32124"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"7.1"	""	"3.8"	""	"4.5"	""	"6.7"	"5.8"	""	"516"	"19"	"34.000"	"27.000"	"0.310184224131292"	"15"	"0.000523"	"0.002948"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVLFLLDLPK"	"[R].eEAVLFLLDLPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"923.06006"	"1845.11284"	"1845.11376"	"-0.50"	"-0.00046"	"7/104"	"7"	"104"	"96846.3026123047"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"92.8398"	"32043"	"32043"	"32030"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"8.2"	""	"6.9"	""	"7.5"	""	"5.0"	"7.5"	""	"513"	"34"	"34.000"	"27.000"	"0.00948609281136382"	"15"	"0.0001308"	"0.0002942"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVLFLLDLPK"	"[R].eEAVLFLLDLPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"615.70917"	"1845.11295"	"1845.11376"	"-0.44"	"-0.00027"	"11/104"	"11"	"104"	"245645.486572266"	"HCD"	"MS2"	"7.528583"	"8.7"	"100.000"	"92.6383"	"31950"	"31950"	"31942"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"10.4"	""	"14.7"	""	"16.5"	""	"15.8"	"18.1"	""	"513"	"39"	"34.000"	"27.000"	"0.0034760608426804"	"24"	"0"	"0.0001584"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVLFLLDLPK"	"[R].eEAVLFLLDLPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.5758"	"0.0000"	"1"	"1"	"1"	"615.70923"	"1845.11313"	"1845.11376"	"-0.34"	"-0.00021"	"5/104"	"5"	"104"	"174891.803039551"	"HCD"	"MS2"	"20.56804"	"6.1"	"100.000"	"92.7769"	"32019"	"32019"	"32012"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.2"	""	"7.1"	""	"9.4"	""	"12.9"	""	"8.4"	"12.3"	""	"513"	"33"	"34.000"	"27.000"	"0.0133994622478274"	""	"0.0001889"	"0.0006668"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVLFLLDLPK"	"[R].eEAVLFLLDLPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"923.06024"	"1845.11321"	"1845.11376"	"-0.30"	"-0.00028"	"9/104"	"9"	"104"	"86488.6087036133"	"HCD"	"MS2"	"12.28862"	"4.8"	"100.000"	"92.9438"	"32052"	"32052"	"32047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.9"	""	"8.5"	""	"5.2"	""	"7.6"	""	"6.8"	"13.9"	""	"513"	"25"	"34.000"	"27.000"	"0.0807397442566987"	"17"	"0.0001889"	"0.0005753"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVLFLLDLPK"	"[R].eEAVLFLLDLPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"615.70941"	"1845.11368"	"1845.11376"	"-0.04"	"-0.00003"	"11/104"	"11"	"104"	"373775.334533691"	"HCD"	"MS2"	"4.730431"	"10.4"	"100.000"	"92.9092"	"32040"	"32040"	"32035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.3"	""	"18.8"	""	"14.4"	""	"18.7"	""	"13.8"	"24.4"	""	"514"	"29"	"34.000"	"27.000"	"0.0314002512662372"	"18"	"0"	"0.0001414"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVLFLLDLPK"	"[R].eEAVLFLLDLPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"923.06079"	"1845.11431"	"1845.11376"	"0.30"	"0.00027"	"8/104"	"8"	"104"	"93750.3630371094"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"92.6782"	"31964"	"31964"	"31958"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"11.2"	""	"7.7"	""	"7.9"	""	"11.6"	"10.8"	""	"516"	"20"	"34.000"	"27.000"	"0.234217696785972"	"16"	"0.0003571"	"0.001498"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].TFVSITPAEVGVLVGk.[D]"	"K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"923.54706"	"1846.08684"	"1846.08872"	"-1.02"	"-0.00094"	"9/136"	"9"	"136"	"219403.229736328"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"74.0240"	"24670"	"24670"	"24639"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.6"	""	"16.9"	""	"14.0"	""	"15.0"	""	"19.0"	"17.3"	""	"750"	"47"	"35.000"	"28.000"	"0.000762133879101083"	"17"	"0.0001889"	"0.0008183"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].TFVSITPAEVGVLVGk.[D]"	"K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"616.03381"	"1846.08689"	"1846.08872"	"-0.99"	"-0.00061"	"8/136"	"8"	"136"	"896079.692749023"	"HCD"	"MS2"	"39.24078"	"32.8"	"100.000"	"74.0195"	"24668"	"24668"	"24639"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.4"	""	"47.1"	""	"43.2"	""	"56.3"	"1.7"	"53.5"	"63.4"	""	"750"	"34"	"35.000"	"28.000"	"0.0149979281160412"	"23"	"0.0003571"	"0.001513"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].TFVSITPAEVGVLVGk.[D]"	"K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"616.03394"	"1846.08725"	"1846.08872"	"-0.79"	"-0.00049"	"6/136"	"6"	"136"	"1156129.73291016"	"HCD"	"MS2"	"48.48334"	"39.1"	"100.000"	"73.9504"	"24588"	"24588"	"24561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.1"	""	"57.0"	""	"51.7"	""	"70.8"	"1.1"	"73.9"	"68.7"	""	"750"	"27"	"35.000"	"28.000"	"0.0776303005796641"	"22"	"0.0003146"	"0.001456"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].TFVSITPAEVGVLVGk.[D]"	"K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"923.54834"	"1846.08940"	"1846.08872"	"0.37"	"0.00034"	"7/136"	"7"	"136"	"220138.036621094"	"HCD"	"MS2"	"13.42753"	"13.0"	"100.000"	"73.9850"	"24602"	"24602"	"24577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.6"	""	"16.6"	""	"13.0"	""	"22.7"	"1.9"	"30.1"	"25.4"	""	"747"	"47"	"35.000"	"28.000"	"0.000713330192074491"	"24"	"0.0001889"	"0.0005663"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"923.54858"	"1846.08989"	"1846.09375"	"-2.09"	"-0.00193"	"11/114"	"11"	"114"	"415186.079650879"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"83.6008"	"28565"	"28565"	"28539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.5"	""	"39.1"	""	"42.3"	""	"58.3"	""	"60.8"	"54.1"	""	"749"	"72"	"35.000"	"28.000"	"2.28797788327137E-06"	"26"	"0"	"2.703E-06"	"1.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"616.03540"	"1846.09165"	"1846.09375"	"-1.14"	"-0.00070"	"11/114"	"11"	"114"	"2467470.14904785"	"HCD"	"MS2"	"17.66444"	"64.0"	"100.000"	"83.5553"	"28495"	"28495"	"28476"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.1"	""	"71.5"	""	"87.1"	""	"112.2"	""	"131.2"	"131.2"	""	"713"	"44"	"35.000"	"28.000"	"0.00156696585903584"	"25"	"0"	"8.317E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8875"	"0.0000"	"1"	"1"	"1"	"923.54950"	"1846.09172"	"1846.09375"	"-1.10"	"-0.00101"	"19/114"	"19"	"114"	"826969.663146973"	"HCD"	"MS2"	"0"	"62.3"	"100.000"	"83.5992"	"28513"	"28513"	"28492"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.1"	""	"86.2"	""	"79.9"	""	"109.0"	"0.3"	"110.6"	"122.9"	""	"711"	"80"	"35.000"	"28.000"	"3.79174921097357E-07"	"27"	"0"	"4.62E-07"	"1.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9053"	"0.0000"	"1"	"1"	"1"	"923.54968"	"1846.09209"	"1846.09375"	"-0.90"	"-0.00083"	"21/114"	"21"	"114"	"3640322.07189941"	"HCD"	"MS2"	"0"	"246.6"	"100.000"	"83.8817"	"28679"	"28679"	"28663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.6"	""	"292.8"	""	"333.2"	""	"421.6"	"2.6"	"473.0"	"484.6"	""	"710"	"95"	"35.000"	"28.000"	"1.17281187068069E-08"	"28"	"0"	"1.437E-06"	"1.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"616.03564"	"1846.09238"	"1846.09375"	"-0.74"	"-0.00046"	"9/114"	"9"	"114"	"237070.172790527"	"HCD"	"MS2"	"18.7697"	"12.3"	"100.000"	"84.6005"	"28973"	"28973"	"28945"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"14.6"	""	"12.5"	""	"24.1"	""	"24.5"	"29.7"	""	"710"	"31"	"35.000"	"28.000"	"0.027116170317008"	"17"	"0.0003146"	"0.001439"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"616.03564"	"1846.09238"	"1846.09375"	"-0.74"	"-0.00046"	"11/114"	"11"	"114"	"1369694.4911499"	"HCD"	"MS2"	"2.042161"	"40.4"	"100.000"	"84.1635"	"28743"	"28743"	"28724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.2"	""	"49.9"	""	"59.5"	""	"63.0"	""	"77.8"	"83.5"	""	"710"	"45"	"35.000"	"28.000"	"0.00104526967999856"	"24"	"0"	"0.0001129"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7636"	"0.0000"	"1"	"1"	"1"	"616.03564"	"1846.09238"	"1846.09375"	"-0.74"	"-0.00046"	"8/114"	"8"	"114"	"2366304.72631836"	"HCD"	"MS2"	"33.138"	"62.0"	"100.000"	"83.5823"	"28557"	"28557"	"28539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.6"	""	"79.0"	""	"74.8"	""	"112.0"	""	"119.5"	"118.6"	""	"710"	"55"	"35.000"	"28.000"	"0.000124516915253162"	"28"	"0"	"2.747E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"923.54993"	"1846.09258"	"1846.09375"	"-0.64"	"-0.00059"	"13/114"	"13"	"114"	"196021.58001709"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"84.1952"	"28807"	"28807"	"28785"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.6"	""	"18.8"	""	"23.3"	""	"26.1"	""	"34.3"	"28.0"	""	"708"	"41"	"35.000"	"28.000"	"0.00284448247253708"	"17"	"0"	"8.52E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7885"	"0.0000"	"1"	"1"	"1"	"616.03577"	"1846.09275"	"1846.09375"	"-0.54"	"-0.00033"	"13/114"	"13"	"114"	"1983539.40081787"	"HCD"	"MS2"	"5.116416"	"48.4"	"100.000"	"84.1814"	"28802"	"28802"	"28785"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.2"	""	"61.1"	""	"58.8"	""	"73.1"	"0.3"	"99.4"	"96.1"	""	"705"	"52"	"35.000"	"28.000"	"0.000235049386147802"	"27"	"0"	"1.08E-05"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"923.55029"	"1846.09331"	"1846.09375"	"-0.24"	"-0.00022"	"12/114"	"12"	"114"	"3102071.85900879"	"HCD"	"MS2"	"0"	"223.2"	"100.000"	"83.8824"	"28629"	"28629"	"28612"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.4"	""	"266.5"	""	"272.1"	""	"416.4"	"2.9"	"427.3"	"427.7"	""	"706"	"84"	"35.000"	"28.000"	"1.29352463850685E-07"	"27"	"0"	"1.154E-06"	"1.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"923.55042"	"1846.09355"	"1846.09375"	"-0.11"	"-0.00010"	"12/114"	"12"	"114"	"135133.125427246"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"84.2120"	"28763"	"28763"	"28740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"13.1"	""	"14.6"	""	"20.9"	""	"17.6"	"24.8"	""	"705"	"41"	"35.000"	"28.000"	"0.00263123187339548"	"20"	"0"	"0.0001358"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"616.03644"	"1846.09476"	"1846.09375"	"0.55"	"0.00034"	"11/114"	"11"	"114"	"235962.428527832"	"HCD"	"MS2"	"30.89934"	"11.0"	"100.000"	"84.5829"	"28914"	"28914"	"28892"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.8"	""	"14.8"	""	"14.8"	""	"20.6"	""	"21.4"	"22.6"	""	"680"	"30"	"35.000"	"28.000"	"0.0358491544773028"	"23"	"0.0001889"	"0.0006958"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8367"	"0.0000"	"1"	"1"	"1"	"616.03662"	"1846.09531"	"1846.09375"	"0.84"	"0.00052"	"10/114"	"10"	"114"	"29099504.3796387"	"HCD"	"MS2"	"3.463242"	"172.8"	"26.534"	"83.8773"	"28678"	"28678"	"28663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.4"	""	"212.4"	""	"214.8"	""	"307.9"	"0.6"	"342.8"	"332.5"	""	"680"	"49"	"35.000"	"28.000"	"0.000430010358140192"	"23"	"0"	"2.669E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTK"	"[K].gVDEATIIDILTk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7636"	"0.0000"	"1"	"1"	"1"	"616.03735"	"1846.09751"	"1846.09375"	"2.03"	"0.00125"	"8/114"	"8"	"114"	"32941293.6779785"	"HCD"	"MS2"	"3.169839"	"198.5"	"27.879"	"83.8433"	"28613"	"28613"	"28596"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.6"	""	"213.6"	""	"266.7"	""	"368.0"	"2.6"	"377.1"	"397.0"	""	"654"	"55"	"35.000"	"28.000"	"0.00011029294993145"	""	"0"	"2.937E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDLKPDWGK"	"[K].tVDLkPDWGk.[G]"	"N-Term(TMT6plex); K5(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.03857"	"1846.10117"	"1846.10415"	"-1.61"	"-0.00099"	"5/94"	"5"	"94"	"8621885.85736084"	"HCD"	"MS2"	"16.97086"	"594.4"	"100.000"	"43.9811"	"12440"	"12440"	"12416"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"906.5"	""	"865.8"	""	"883.3"	""	"863.6"	""	"1065.3"	"1047.0"	""	"666"	"3"	"35.000"	"28.000"	"15.9751238396017"	"13"	"0.0001889"	"0.0006957"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDLKPDWGK"	"[K].tVDLkPDWGk.[G]"	"N-Term(TMT6plex); K5(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.03912"	"1846.10282"	"1846.10415"	"-0.72"	"-0.00044"	"5/94"	"5"	"94"	"8813899.88293457"	"HCD"	"MS2"	"19.45935"	"611.7"	"100.000"	"43.6876"	"12271"	"12271"	"12250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1073.6"	""	"913.3"	""	"882.8"	""	"864.0"	"10.1"	"1011.0"	"1028.5"	""	"655"	"9"	"35.000"	"28.000"	"4.02913022441055"	"13"	"0"	"0.0001338"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIQSEFPSLLK"	"[K].lLIQSEFPSLLk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02634"	"Protein S100-G OS=Rattus norvegicus OX=10116 GN=S100g PE=1 SV=3"	"P02634"	"Protein S100-G OS=Rattus norvegicus OX=10116 GN=S100g PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"923.57581"	"1846.14433"	"1846.14539"	"-0.57"	"-0.00053"	"14/112"	"14"	"112"	"255547.714599609"	"HCD"	"MS2"	"15.51689"	"18.9"	"100.000"	"79.6115"	"26938"	"26938"	"26911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.3"	""	"23.3"	""	"35.4"	""	"32.9"	""	"43.7"	"24.5"	""	"299"	"58"	"31.000"	"24.000"	"2.30484217715959E-05"	"16"	"0"	"5.757E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIQSEFPSLLK"	"[K].lLIQSEFPSLLk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P02634"	"Protein S100-G OS=Rattus norvegicus OX=10116 GN=S100g PE=1 SV=3"	"P02634"	"Protein S100-G OS=Rattus norvegicus OX=10116 GN=S100g PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"923.57623"	"1846.14519"	"1846.14539"	"-0.11"	"-0.00010"	"14/112"	"14"	"112"	"285760.224975586"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"79.6238"	"26892"	"26892"	"26865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.7"	""	"20.2"	""	"35.6"	""	"41.9"	""	"41.2"	"22.1"	""	"297"	"55"	"31.000"	"24.000"	"5.04343529796757E-05"	"16"	"0"	"7.286E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFFPCFDTPAVK"	"[R].aFFPcFDTPAVk.[C]"	"N-Term(TMT6plex); C5(Methylthio); K12(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"923.98553"	"1846.96379"	"1846.96361"	"0.10"	"0.00009"	"7/90"	"7"	"90"	"225442.151489258"	"HCD"	"MS2"	"36.10812"	"18.8"	"100.000"	"79.8469"	"27034"	"27034"	"27007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.1"	""	"23.7"	""	"26.2"	""	"32.4"	"1.0"	"31.3"	"31.2"	""	"1106"	"20"	"37.000"	"30.000"	"0.551728135293872"	"16"	"0.0006037"	"0.004053"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFFPCFDTPAVK"	"[R].aFFPcFDTPAVk.[C]"	"N-Term(TMT6plex); C5(Methylthio); K12(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"923.98590"	"1846.96453"	"1846.96361"	"0.50"	"0.00046"	"6/90"	"6"	"90"	"219984.005859375"	"HCD"	"MS2"	"13.3798"	"17.3"	"100.000"	"79.8960"	"27003"	"27003"	"26977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.0"	""	"23.1"	""	"26.0"	""	"28.7"	""	"33.0"	"27.2"	""	"1116"	"13"	"37.000"	"30.000"	"2.6220091260171"	"13"	"0.00119"	"0.01587"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFMIPTNPPPTFR"	"[R].aIFmIPTNPPPTFR.[K]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"O54748"	"Serine/threonine-protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Stk3 PE=1 SV=1"	"O54748"	"Serine/threonine-protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Stk3 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"616.34082"	"1847.00791"	"1847.00869"	"-0.42"	"-0.00026"	"9/126"	"9"	"126"	"1937256.65039063"	"HCD"	"MS2"	"21.21247"	"51.1"	"100.000"	"64.5491"	"20758"	"20758"	"20729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.2"	""	"69.4"	""	"73.5"	""	"76.0"	"4.6"	"88.4"	"98.5"	""	"1191"	"14"	"37.000"	"30.000"	"2.48245717856584"	"14"	"0.0001889"	"0.0006879"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELQSIGTNNFLR"	"[K].lLELQSIGTNNFLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"924.03333"	"1847.05937"	"1847.05881"	"0.30"	"0.00028"	"12/134"	"12"	"134"	"429973.491027832"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"73.8927"	"24616"	"24616"	"24591"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.3"	""	"41.0"	""	"37.4"	""	"47.3"	""	"46.8"	"49.0"	""	"1030"	"15"	"37.000"	"30.000"	"1.61364214802253"	"21"	"0.0001889"	"0.0004212"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETPAPRKPPQALAK"	"[K].IETPAPRKPPqALAk.[Q]"	"Q11(Deamidated); K15(TMT6plex)"	"1"	"1"	"Q6V7V2"	"Rhotekin OS=Rattus norvegicus OX=10116 GN=Rtkn PE=1 SV=1"	"Q6V7V2"	"Rhotekin OS=Rattus norvegicus OX=10116 GN=Rtkn PE=1 SV=1"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"616.36584"	"1847.08298"	"1847.09520"	"-6.61"	"-0.00407"	"5/130"	"5"	"130"	"1218902.76568604"	"HCD"	"MS2"	"0"	"40.3"	"100.000"	"71.9903"	"23788"	"23788"	"23761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.8"	""	"48.0"	""	"57.7"	""	"61.8"	""	"71.3"	"88.0"	""	"810"	"10"	"36.000"	"29.000"	"4.19232577505134"	"15"	"0.005975"	"0.2002"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDEQALLSSILAK"	"[R].tDEQALLSSILAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6P791"	"Ragulator complex protein LAMTOR1 OS=Rattus norvegicus OX=10116 GN=Lamtor1 PE=1 SV=1"	"Q6P791"	"Ragulator complex protein LAMTOR1 OS=Rattus norvegicus OX=10116 GN=Lamtor1 PE=1 SV=1"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"616.36694"	"1847.08628"	"1847.08900"	"-1.47"	"-0.00091"	"13/130"	"13"	"130"	"825324.147644043"	"HCD"	"MS2"	"18.88019"	"30.3"	"100.000"	"74.8455"	"24953"	"24953"	"24929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.2"	""	"34.7"	""	"34.9"	""	"58.5"	""	"64.7"	"59.8"	""	"805"	"41"	"36.000"	"29.000"	"0.00316057342930554"	"26"	"0"	"3.176E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDEQALLSSILAK"	"[R].tDEQALLSSILAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6P791"	"Ragulator complex protein LAMTOR1 OS=Rattus norvegicus OX=10116 GN=Lamtor1 PE=1 SV=1"	"Q6P791"	"Ragulator complex protein LAMTOR1 OS=Rattus norvegicus OX=10116 GN=Lamtor1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"924.04724"	"1847.08721"	"1847.08900"	"-0.97"	"-0.00090"	"4/130"	"4"	"130"	"109797.739685059"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"74.8060"	"24989"	"24989"	"24959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.7"	""	"11.0"	""	"8.7"	""	"16.8"	""	"19.8"	"16.9"	""	"789"	"10"	"35.000"	"28.000"	"3.9906809470553"	"15"	"0.002711"	"0.04184"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDEQALLSSILAK"	"[R].tDEQALLSSILAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6P791"	"Ragulator complex protein LAMTOR1 OS=Rattus norvegicus OX=10116 GN=Lamtor1 PE=1 SV=1"	"Q6P791"	"Ragulator complex protein LAMTOR1 OS=Rattus norvegicus OX=10116 GN=Lamtor1 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"616.36774"	"1847.08866"	"1847.08900"	"-0.19"	"-0.00011"	"12/130"	"12"	"130"	"1444004.34527588"	"HCD"	"MS2"	"7.495781"	"41.9"	"100.000"	"74.7739"	"24976"	"24976"	"24959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.2"	""	"50.1"	""	"43.2"	""	"77.4"	"1.6"	"92.0"	"88.1"	""	"775"	"52"	"35.000"	"28.000"	"0.000251345842999942"	"28"	"0"	"7.316E-06"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKDFLALALLDGR"	"[R].gkDFLALALLDGR.[V]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"1"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"616.37561"	"1847.11228"	"1847.11549"	"-1.74"	"-0.00107"	"8/134"	"8"	"134"	"1717569.79241943"	"HCD"	"MS2"	"23.26312"	"78.3"	"100.000"	"67.8448"	"22147"	"22147"	"22122"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.2"	""	"93.7"	""	"89.4"	""	"132.9"	"1.0"	"150.7"	"177.5"	""	"534"	"25"	"34.000"	"27.000"	"0.0836587288392262"	"20"	"0"	"3.11E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKDFLALALLDGR"	"[R].gkDFLALALLDGR.[V]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"1"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"616.37616"	"1847.11393"	"1847.11549"	"-0.85"	"-0.00052"	"15/134"	"15"	"134"	"2018049.79040527"	"HCD"	"MS2"	"16.29311"	"87.5"	"100.000"	"67.9405"	"22135"	"22135"	"22106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.2"	""	"93.6"	""	"111.9"	""	"145.7"	"2.3"	"183.2"	"184.0"	""	"534"	"10"	"34.000"	"27.000"	"2.46326571050322"	"17"	"0.0001889"	"0.0004613"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYHLLKPMGK"	"[K].gYHLLkPmGk.[V]"	"N-Term(TMT6plex); K6(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"4"	"4"	"0.8571"	"0.0000"	"1"	"1"	"1"	"462.53439"	"1847.11574"	"1847.11802"	"-1.23"	"-0.00057"	"9/82"	"9"	"82"	"26607795.0456543"	"HCD"	"MS2"	"11.31331"	"543.2"	"45.244"	"32.2313"	"7645"	"7645"	"7626"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"695.3"	""	"790.5"	""	"835.9"	""	"1035.9"	""	"905.8"	"882.5"	""	"545"	"14"	"34.000"	"27.000"	"1.00084426885728"	"15"	"0.0001889"	"0.001039"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSAGSLYPAVAK"	"[R].lLVSAGSLYPAVAk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"924.07306"	"1847.13884"	"1847.14064"	"-0.97"	"-0.00090"	"14/110"	"14"	"110"	"972043.635620117"	"HCD"	"MS2"	"14.27159"	"61.0"	"100.000"	"65.4144"	"21164"	"21164"	"21139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.4"	""	"103.5"	""	"76.6"	""	"102.1"	""	"98.8"	"86.5"	""	"366"	"50"	"32.000"	"25.000"	"0.00019835862526588"	"18"	"0"	"1.072E-05"	"1.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSAGSLYPAVAK"	"[R].lLVSAGSLYPAVAk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"616.38470"	"1847.13956"	"1847.14064"	"-0.59"	"-0.00036"	"12/110"	"12"	"110"	"4615816.68328857"	"HCD"	"MS2"	"28.52015"	"118.3"	"100.000"	"65.3430"	"21135"	"21135"	"21107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.4"	""	"205.2"	""	"150.8"	""	"186.2"	"0.4"	"199.1"	"182.6"	""	"364"	"47"	"32.000"	"25.000"	"0.000396343178568275"	"23"	"0"	"0.0001013"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSAGSLYPAVAK"	"[R].lLVSAGSLYPAVAk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8689"	"0.0000"	"1"	"1"	"1"	"616.38489"	"1847.14011"	"1847.14064"	"-0.29"	"-0.00018"	"13/110"	"13"	"110"	"5023830.81158447"	"HCD"	"MS2"	"7.190933"	"109.3"	"100.000"	"65.6406"	"21256"	"21256"	"21235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.7"	""	"174.7"	""	"139.6"	""	"169.0"	"3.1"	"172.0"	"187.3"	""	"368"	"61"	"32.000"	"25.000"	"1.33603496168068E-05"	"24"	"0"	"1.673E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSAGSLYPAVAK"	"[R].lLVSAGSLYPAVAk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.8983"	"0.0000"	"1"	"1"	"1"	"616.38495"	"1847.14029"	"1847.14064"	"-0.19"	"-0.00012"	"13/110"	"13"	"110"	"1408164.82739258"	"HCD"	"MS2"	"20.2513"	"46.2"	"100.000"	"65.8466"	"21288"	"21288"	"21257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.3"	""	"67.4"	""	"55.8"	""	"74.1"	"0.8"	"78.0"	"88.3"	""	"371"	"59"	"32.000"	"25.000"	"2.51967144341917E-05"	"23"	"0"	"2.716E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSAGSLYPAVAK"	"[R].lLVSAGSLYPAVAk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"616.38513"	"1847.14084"	"1847.14064"	"0.11"	"0.00007"	"13/110"	"13"	"110"	"6441802.27972412"	"HCD"	"MS2"	"2.508027"	"140.8"	"100.000"	"65.4709"	"21134"	"21134"	"21113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"253.4"	""	"245.7"	""	"168.4"	""	"232.0"	"1.0"	"224.6"	"205.0"	""	"370"	"42"	"32.000"	"25.000"	"0.00113284822469083"	"17"	"0"	"4.518E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSAGSLYPAVAK"	"[R].lLVSAGSLYPAVAk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"924.07465"	"1847.14202"	"1847.14064"	"0.74"	"0.00069"	"19/110"	"19"	"110"	"781407.609924316"	"HCD"	"MS2"	"0"	"52.0"	"100.000"	"65.4869"	"21141"	"21141"	"21113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.8"	""	"75.2"	""	"61.1"	""	"88.3"	""	"87.6"	"82.2"	""	"356"	"84"	"32.000"	"25.000"	"7.07000958055604E-08"	""	"0"	"1.308E-06"	"1.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSAGSLYPAVAK"	"[R].lLVSAGSLYPAVAk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"924.07471"	"1847.14214"	"1847.14064"	"0.81"	"0.00075"	"14/110"	"14"	"110"	"255039.216064453"	"HCD"	"MS2"	"34.079"	"21.7"	"100.000"	"65.7984"	"21268"	"21268"	"21241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.6"	""	"32.4"	""	"29.2"	""	"37.8"	""	"35.1"	"39.8"	""	"356"	"57"	"32.000"	"25.000"	"3.91219057355699E-05"	"23"	"0.0001308"	"0.000224"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVNFPFLVK"	"[R].iLQAVNFPFLVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"924.08099"	"1847.15471"	"1847.15590"	"-0.64"	"-0.00059"	"13/108"	"13"	"108"	"220346.549072266"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"88.1602"	"30389"	"30389"	"30381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.8"	""	"13.9"	""	"26.5"	""	"24.5"	""	"24.0"	"27.5"	""	"281"	"44"	"31.000"	"24.000"	"0.000611894182528224"	"20"	"0"	"0.0001194"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVNFPFLVK"	"[R].iLQAVNFPFLVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"616.38995"	"1847.15531"	"1847.15590"	"-0.32"	"-0.00020"	"12/108"	"12"	"108"	"739112.281188965"	"HCD"	"MS2"	"16.28212"	"19.7"	"100.000"	"88.1834"	"30398"	"30398"	"30386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.7"	""	"24.9"	""	"28.4"	""	"34.6"	"0.7"	"30.1"	"44.4"	""	"280"	"46"	"31.000"	"24.000"	"0.000360684961980361"	"17"	"0"	"3.693E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVNFPFLVK"	"[R].iLQAVNFPFLVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"616.39001"	"1847.15549"	"1847.15590"	"-0.22"	"-0.00014"	"12/108"	"12"	"108"	"536070.44152832"	"HCD"	"MS2"	"18.78876"	"15.2"	"100.000"	"88.1179"	"30328"	"30328"	"30315"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.0"	""	"19.5"	""	"24.5"	""	"24.2"	""	"22.5"	"30.6"	""	"280"	"49"	"31.000"	"24.000"	"0.000171841492362177"	"18"	"0"	"5.725E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQAVNFPFLVK"	"[R].iLQAVNFPFLVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"924.08221"	"1847.15715"	"1847.15590"	"0.68"	"0.00063"	"6/108"	"6"	"108"	"169745.906616211"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"88.0921"	"30318"	"30318"	"30301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.2"	""	"16.5"	""	"15.9"	""	"21.9"	""	"19.9"	"27.3"	""	"273"	"33"	"31.000"	"24.000"	"0.00688862671174216"	"17"	"0.0001859"	"0.0003598"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGTSEYITSLAYK"	"[R].gGTSEYITSLAYk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"616.67572"	"1848.01261"	"1848.01550"	"-1.57"	"-0.00096"	"11/108"	"11"	"108"	"2689922.06842041"	"HCD"	"MS2"	"16.31496"	"115.4"	"100.000"	"50.2746"	"14951"	"14951"	"14924"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.4"	""	"160.0"	""	"163.4"	""	"184.5"	"2.3"	"210.1"	"207.6"	""	"1234"	"27"	"37.000"	"30.000"	"0.126848449772221"	"17"	"0"	"0.0001409"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGTSEYITSLAYK"	"[R].gGTSEYITSLAYk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"616.67694"	"1848.01627"	"1848.01550"	"0.42"	"0.00026"	"12/108"	"12"	"108"	"3101246.03326416"	"HCD"	"MS2"	"54.80819"	"133.0"	"100.000"	"50.5484"	"15112"	"15112"	"15092"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.7"	""	"181.3"	""	"187.0"	""	"219.0"	"1.8"	"239.7"	"244.0"	""	"1220"	"29"	"37.000"	"30.000"	"0.0826665541534132"	"16"	"0"	"9.159E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYISPYFINTSK"	"[R].gYISPYFINTSk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.68091"	"1848.02817"	"1848.03076"	"-1.40"	"-0.00086"	"12/108"	"12"	"108"	"8654038.62231445"	"HCD"	"MS2"	"19.93395"	"213.1"	"100.000"	"56.3366"	"17407"	"17407"	"17387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"410.3"	""	"327.4"	""	"323.4"	""	"311.1"	"2.2"	"309.4"	"327.8"	""	"1146"	"20"	"37.000"	"30.000"	"0.543443779471414"	"14"	"0.0001889"	"0.0004591"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYISPYFINTSK"	"[R].gYISPYFINTSk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"924.51801"	"1848.02873"	"1848.03076"	"-1.09"	"-0.00101"	"9/108"	"9"	"108"	"1716836.20367432"	"HCD"	"MS2"	"9.68613"	"144.7"	"100.000"	"56.3455"	"17411"	"17411"	"17387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"368.9"	""	"231.1"	""	"239.8"	""	"174.5"	"1.5"	"170.8"	"174.6"	""	"1159"	"56"	"37.000"	"30.000"	"0.000138055413249336"	"21"	"0"	"8.9E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYISPYFINTSK"	"[R].gYISPYFINTSk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.68121"	"1848.02909"	"1848.03076"	"-0.90"	"-0.00056"	"14/108"	"14"	"108"	"7702768.05041504"	"HCD"	"MS2"	"35.93307"	"189.7"	"100.000"	"56.5255"	"17539"	"17539"	"17509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"366.5"	""	"281.3"	""	"293.6"	""	"274.0"	"3.3"	"284.3"	"287.3"	""	"1149"	"21"	"37.000"	"30.000"	"0.491235826552251"	"14"	"0.0001308"	"0.0002328"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYISPYFINTSK"	"[R].gYISPYFINTSk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"924.51868"	"1848.03008"	"1848.03076"	"-0.37"	"-0.00034"	"19/108"	"19"	"108"	"1603767.32537842"	"HCD"	"MS2"	"27.25183"	"124.9"	"100.000"	"56.5277"	"17540"	"17540"	"17509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.7"	""	"202.1"	""	"208.6"	""	"152.1"	"0.9"	"143.2"	"152.4"	""	"1155"	"56"	"37.000"	"30.000"	"0.000143071123828322"	"19"	"0"	"7.004E-06"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"924.52051"	"1848.03374"	"1848.03413"	"-0.21"	"-0.00019"	"11/114"	"11"	"114"	"1596996.76794434"	"HCD"	"MS2"	"0"	"90.0"	"100.000"	"57.8435"	"18077"	"18077"	"18053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.4"	""	"99.7"	""	"91.1"	""	"293.0"	"0.2"	"156.8"	"135.0"	""	"1151"	"55"	"37.000"	"30.000"	"0.000190565960413232"	"20"	"0.0001889"	"0.0003963"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"924.52069"	"1848.03411"	"1848.03413"	"-0.01"	"-0.00001"	"12/114"	"12"	"114"	"1816242.30352783"	"HCD"	"MS2"	"0"	"105.7"	"100.000"	"57.6424"	"17941"	"17941"	"17915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.7"	""	"115.6"	""	"100.7"	""	"331.6"	"2.3"	"199.0"	"149.1"	""	"1150"	"62"	"37.000"	"30.000"	"3.36254298383077E-05"	"16"	"0"	"4.841E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"924.52124"	"1848.03520"	"1848.03413"	"0.58"	"0.00054"	"8/114"	"8"	"114"	"819489.028381348"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"57.9533"	"18068"	"18068"	"18043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.8"	""	"56.3"	""	"51.1"	""	"159.7"	""	"91.4"	"79.3"	""	"1140"	"25"	"37.000"	"30.000"	"0.18402416493762"	"14"	"0.000523"	"0.003228"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"616.68329"	"1848.03531"	"1848.03413"	"0.64"	"0.00039"	"9/114"	"9"	"114"	"10814380.1323853"	"HCD"	"MS2"	"3.051348"	"257.4"	"100.000"	"57.8319"	"18072"	"18072"	"18053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"227.3"	""	"306.1"	""	"259.5"	""	"776.5"	"4.3"	"496.5"	"371.2"	""	"1140"	"32"	"37.000"	"30.000"	"0.0363810187128613"	"17"	"0.0001859"	"0.0003568"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.68335"	"1848.03550"	"1848.03413"	"0.74"	"0.00046"	"9/114"	"9"	"114"	"11068399.6218262"	"HCD"	"MS2"	"6.184982"	"260.7"	"92.463"	"57.6653"	"17950"	"17950"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.3"	""	"298.7"	""	"262.2"	""	"772.5"	""	"491.8"	"408.5"	""	"1126"	"30"	"37.000"	"30.000"	"0.0504090363004421"	"14"	"0.0001308"	"0.0003103"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.68353"	"1848.03604"	"1848.03413"	"1.04"	"0.00064"	"8/114"	"8"	"114"	"4633751.20178223"	"HCD"	"MS2"	"4.971101"	"138.2"	"100.000"	"57.9853"	"18081"	"18081"	"18059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.2"	""	"158.1"	""	"149.6"	""	"366.5"	""	"284.9"	"217.7"	""	"1131"	"28"	"37.000"	"30.000"	"0.088395999191346"	"14"	"0.0002277"	"0.001174"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"924.52173"	"1848.03618"	"1848.03413"	"1.11"	"0.00103"	"10/114"	"10"	"114"	"581215.0078125"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"58.1612"	"18207"	"18207"	"18181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.3"	""	"51.1"	""	"32.0"	""	"121.7"	""	"70.4"	"61.2"	""	"1133"	"54"	"37.000"	"30.000"	"0.000237246554639301"	"16"	"0.0001308"	"0.0002617"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSPVPDLVPGSFK"	"[K].mSPVPDLVPGSFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"616.68378"	"1848.03678"	"1848.03413"	"1.43"	"0.00088"	"9/114"	"9"	"114"	"5847520.75366211"	"HCD"	"MS2"	"11.16282"	"159.9"	"100.000"	"58.1498"	"18202"	"18202"	"18181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.5"	""	"174.6"	""	"170.0"	""	"443.8"	"3.3"	"311.0"	"252.6"	""	"1131"	"37"	"37.000"	"30.000"	"0.0122583667127554"	"16"	"0"	"0.0001437"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAMEAALALEK"	"[K].tLEAMEAALALEk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"Q7TP54"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1"	"Q7TP54; P02793"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1; Ferritin light chain 1 OS=Rattus norvegicus OX=10116 GN=Ftl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"616.68915"	"1848.05289"	"1848.05526"	"-1.28"	"-0.00079"	"7/118"	"7"	"118"	"1727256.60577393"	"HCD"	"MS2"	"12.59652"	"51.2"	"100.000"	"75.0185"	"25075"	"25075"	"25055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.3"	""	"51.1"	""	"51.4"	""	"119.5"	"1.5"	"109.3"	"99.6"	""	"1030"	"52"	"37.000"	"30.000"	"0.000356292950023252"	"18"	"0"	"1.642E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAMEAALALEK"	"[K].tLEAMEAALALEk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"Q7TP54"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1"	"Q7TP54; P02793"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1; Ferritin light chain 1 OS=Rattus norvegicus OX=10116 GN=Ftl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9506"	"0.0000"	"1"	"1"	"1"	"924.53009"	"1848.05290"	"1848.05526"	"-1.27"	"-0.00118"	"17/118"	"17"	"118"	"243855.715148926"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"75.1106"	"25113"	"25113"	"25087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.7"	""	"19.4"	""	"21.7"	""	"42.0"	"1.4"	"43.1"	"40.7"	""	"1030"	"81"	"37.000"	"30.000"	"3.85307292763244E-07"	"22"	"0"	"4.275E-06"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAMEAALALEK"	"[K].tLEAMEAALALEk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"Q7TP54"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1"	"Q7TP54; P02793"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1; Ferritin light chain 1 OS=Rattus norvegicus OX=10116 GN=Ftl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"924.53046"	"1848.05364"	"1848.05526"	"-0.88"	"-0.00081"	"15/118"	"15"	"118"	"249344.060974121"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"75.0531"	"25038"	"25038"	"25009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.9"	""	"22.5"	""	"18.9"	""	"48.9"	"0.7"	"41.0"	"40.2"	""	"1031"	"68"	"37.000"	"30.000"	"8.34120259405001E-06"	"22"	"0"	"2.119E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAMEAALALEK"	"[K].tLEAMEAALALEk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"Q7TP54"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1"	"Q7TP54; P02793"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1; Ferritin light chain 1 OS=Rattus norvegicus OX=10116 GN=Ftl1 PE=1 SV=3"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"616.68982"	"1848.05490"	"1848.05526"	"-0.19"	"-0.00012"	"7/118"	"7"	"118"	"1769213.77990723"	"HCD"	"MS2"	"45.94561"	"51.1"	"100.000"	"75.0185"	"25024"	"25024"	"24993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.2"	""	"53.4"	""	"50.6"	""	"113.5"	"1.5"	"118.6"	"98.1"	""	"998"	"47"	"36.000"	"29.000"	"0.00102117587372561"	"22"	"0"	"7.795E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLHQETGFFLK"	"[R].aVLHQETGFFLk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.69666"	"1848.07541"	"1848.07838"	"-1.60"	"-0.00099"	"7/104"	"7"	"104"	"1973924.13775635"	"HCD"	"MS2"	"74.85335"	"113.1"	"100.000"	"48.3526"	"14221"	"14221"	"14197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.2"	""	"137.6"	""	"144.8"	""	"191.2"	"2.0"	"227.1"	"244.4"	""	"800"	"3"	"36.000"	"29.000"	"18.4102629432543"	"13"	"0.0002277"	"0.001347"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSHFVEEFKR"	"[R].lVSHFVEEFkR.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.02301"	"1849.07021"	"1849.07362"	"-1.85"	"-0.00085"	"7/92"	"7"	"92"	"5681112.03881836"	"HCD"	"MS2"	"30.7945"	"164.6"	"100.000"	"47.8944"	"13986"	"13986"	"13960"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.0"	""	"236.6"	""	"258.9"	""	"296.0"	"3.6"	"275.9"	"284.3"	""	"841"	"6"	"36.000"	"29.000"	"9.92581097052432"	"13"	"0.0001859"	"0.0003303"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIGLDLVHGKPR"	"[K].wIGLDLVHGkPR.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.03558"	"1849.12050"	"1849.12124"	"-0.40"	"-0.00018"	"8/92"	"8"	"92"	"4587173.05584717"	"HCD"	"MS2"	"11.82718"	"118.1"	"100.000"	"47.6546"	"13936"	"13936"	"13906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.2"	""	"177.4"	""	"155.5"	""	"204.9"	""	"216.0"	"203.3"	""	"478"	"31"	"33.000"	"26.000"	"0.0195613084364215"	"14"	"0"	"1.419E-05"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIGLDLVHGKPR"	"[K].wIGLDLVHGkPR.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.03580"	"1849.12136"	"1849.12124"	"0.06"	"0.00003"	"8/92"	"8"	"92"	"5203878.81921387"	"HCD"	"MS2"	"5.743177"	"134.3"	"100.000"	"47.3313"	"13755"	"13755"	"13736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.0"	""	"210.7"	""	"184.1"	""	"212.0"	""	"231.8"	"240.8"	""	"478"	"36"	"33.000"	"26.000"	"0.00574642709201658"	"15"	"0"	"1.371E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKVDLLFLGK"	"[K].ekVDLLFLGk.[Q]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"617.06329"	"1849.17533"	"1849.17658"	"-0.68"	"-0.00042"	"9/94"	"9"	"94"	"7104831.93188477"	"HCD"	"MS2"	"32.39637"	"302.3"	"100.000"	"60.8992"	"19320"	"19320"	"19299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"508.6"	""	"451.9"	""	"460.5"	""	"456.2"	""	"492.7"	"489.8"	""	"151"	"5"	"28.000"	"21.000"	"2.39853992334058"	"13"	"0.0005564"	"0.003418"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].lHFFMPGFAPLTSR.[G]"	"N-Term(TMT6plex)"	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"617.33728"	"1849.99729"	"1849.99846"	"-0.63"	"-0.00039"	"9/106"	"9"	"106"	"7584380.95635986"	"HCD"	"MS2"	"2.570871"	"44.7"	"84.166"	"69.0786"	"22651"	"22651"	"22634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.6"	""	"59.0"	""	"69.9"	""	"58.2"	"0.7"	"89.8"	"87.2"	""	"1306"	"44"	"38.000"	"31.000"	"0.00249984557385885"	"26"	"0"	"1.021E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].lHFFMPGFAPLTSR.[G]"	"N-Term(TMT6plex)"	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"617.33740"	"1849.99765"	"1849.99846"	"-0.44"	"-0.00027"	"9/106"	"9"	"106"	"7353057.32336426"	"HCD"	"MS2"	"3.988211"	"54.2"	"98.850"	"69.2439"	"22667"	"22667"	"22650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.6"	""	"68.9"	""	"95.9"	""	"70.5"	""	"110.8"	"109.6"	""	"1305"	"46"	"38.000"	"31.000"	"0.00180127705118378"	"27"	"0"	"1.191E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].lHFFMPGFAPLTSR.[G]"	"N-Term(TMT6plex)"	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.7660"	"0.0000"	"1"	"1"	"1"	"617.33759"	"1849.99820"	"1849.99846"	"-0.14"	"-0.00009"	"15/106"	"15"	"106"	"7278936.74884033"	"HCD"	"MS2"	"14.43757"	"47.0"	"100.000"	"68.7745"	"22526"	"22526"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.8"	""	"62.6"	""	"77.7"	""	"62.6"	"1.2"	"92.4"	"76.1"	""	"1305"	"47"	"38.000"	"31.000"	"0.00124905199107626"	"27"	"0"	"8.894E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].lHFFMPGFAPLTSR.[G]"	"N-Term(TMT6plex)"	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"617.33759"	"1849.99820"	"1849.99846"	"-0.14"	"-0.00009"	"9/106"	"9"	"106"	"7643357.67156982"	"HCD"	"MS2"	"16.58731"	"46.8"	"100.000"	"68.9508"	"22547"	"22547"	"22522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.1"	""	"74.6"	""	"74.5"	""	"57.5"	"1.9"	"88.0"	"83.4"	""	"1305"	"48"	"38.000"	"31.000"	"0.00101760800809459"	"28"	"0"	"2.223E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHSQVVAGMNYK"	"[K].sAHSQVVAGMNYk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"617.33759"	"1849.99820"	"1849.99947"	"-0.69"	"-0.00042"	"9/118"	"9"	"118"	"19648884.9417114"	"HCD"	"MS2"	"14.95273"	"528.8"	"93.091"	"30.7662"	"7046"	"7046"	"7024"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"907.0"	""	"789.1"	""	"590.3"	""	"729.1"	""	"1072.5"	"932.3"	""	"1305"	"33"	"38.000"	"31.000"	"0.0340079548996065"	"15"	"0"	"1.038E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHSQVVAGMNYK"	"[K].sAHSQVVAGMNYk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"617.33789"	"1849.99912"	"1849.99947"	"-0.19"	"-0.00012"	"7/118"	"7"	"118"	"9249706.16125488"	"HCD"	"MS2"	"22.23133"	"221.7"	"100.000"	"30.6284"	"6949"	"6949"	"6920"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"443.3"	""	"351.4"	""	"182.4"	""	"248.6"	""	"536.6"	"353.1"	""	"1294"	"40"	"38.000"	"31.000"	"0.00682188321965145"	"15"	"0"	"2.037E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTAR"	"[R].lHFFmPGFAPLTAR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q4QRB4"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1"	"Q4QRB4"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"617.33917"	"1850.00296"	"1849.99846"	"2.43"	"0.00150"	"9/104"	"9"	"104"	"1567395.64135742"	"HCD"	"MS2"	"21.32682"	"56.3"	"100.000"	"60.1244"	"18951"	"18951"	"18921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.2"	""	"74.1"	""	"82.1"	""	"86.3"	""	"101.2"	"116.1"	""	"1282"	"4"	"38.000"	"31.000"	"26.5373791559447"	"16"	"0.0003839"	"0.001602"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPALDVLYDVMK"	"[K].qPALDVLYDVMk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"925.52802"	"1850.04875"	"1850.04978"	"-0.55"	"-0.00051"	"7/118"	"7"	"118"	"130922.401672363"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"78.1231"	"26331"	"26331"	"26303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.2"	""	"9.0"	""	"11.9"	""	"11.9"	""	"26.7"	"22.3"	""	"1012"	"30"	"37.000"	"30.000"	"0.0492210095231144"	"15"	"0.0006037"	"0.004584"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAWHGKPLPK"	"[K].eAWHGkPLPk.[N]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"617.37897"	"1850.12235"	"1850.12555"	"-1.73"	"-0.00107"	"6/80"	"6"	"80"	"5713161.70562744"	"HCD"	"MS2"	"3.721204"	"360.5"	"100.000"	"32.5071"	"7758"	"7758"	"7734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"535.9"	""	"499.3"	""	"522.7"	""	"493.2"	""	"705.4"	"665.5"	""	"419"	"6"	"33.000"	"26.000"	"5.3973928239204"	"13"	"0.0001889"	"0.000706"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAWHGKPLPK"	"[K].eAWHGkPLPk.[N]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.28650"	"1850.12417"	"1850.12555"	"-0.75"	"-0.00035"	"7/80"	"7"	"80"	"60179438.8491211"	"HCD"	"MS2"	"10.46728"	"305.3"	"16.273"	"32.4029"	"7673"	"7673"	"7656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"362.1"	""	"328.6"	""	"345.5"	""	"627.8"	"2.4"	"643.5"	"589.7"	""	"407"	"10"	"33.000"	"26.000"	"2.11137032618965"	"13"	"0.0001859"	"0.0003437"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAWHGKPLPK"	"[K].eAWHGkPLPk.[N]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.28650"	"1850.12417"	"1850.12555"	"-0.75"	"-0.00035"	"5/80"	"5"	"80"	"57242339.4121094"	"HCD"	"MS2"	"13.92447"	"442.1"	"23.170"	"32.4497"	"7735"	"7735"	"7718"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"566.6"	""	"500.7"	""	"576.8"	""	"772.2"	"6.5"	"877.0"	"895.4"	""	"407"	"11"	"33.000"	"26.000"	"1.58695427491483"	"13"	"0.0001859"	"0.0003317"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLWDYTFGPEK"	"[K].hLWDYTFGPEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.50098"	"1850.98208"	"1850.98414"	"-1.12"	"-0.00052"	"10/92"	"10"	"92"	"5149746.24835205"	"HCD"	"MS2"	"4.693464"	"123.2"	"100.000"	"51.3066"	"15372"	"15372"	"15346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.1"	""	"173.4"	""	"183.6"	""	"186.4"	"0.8"	"203.7"	"241.1"	""	"1238"	"28"	"37.000"	"30.000"	"0.102492160738764"	"14"	"0"	"0.0001239"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLWDYTFGPEK"	"[K].hLWDYTFGPEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.50140"	"1850.98379"	"1850.98414"	"-0.19"	"-0.00009"	"10/92"	"10"	"92"	"5383294.86114502"	"HCD"	"MS2"	"24.51768"	"129.6"	"100.000"	"51.4787"	"15493"	"15493"	"15462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.9"	""	"203.7"	""	"176.9"	""	"202.1"	""	"218.7"	"227.5"	""	"1229"	"25"	"37.000"	"30.000"	"0.17722373586713"	"14"	"0"	"0.0001584"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLWDYTFGPEK"	"[K].hLWDYTFGPEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"925.99567"	"1850.98406"	"1850.98414"	"-0.05"	"-0.00004"	"8/92"	"8"	"92"	"447202.636230469"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"51.5570"	"15525"	"15525"	"15494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.5"	""	"61.4"	""	"64.2"	""	"67.8"	""	"71.7"	"94.9"	""	"1216"	"46"	"37.000"	"30.000"	"0.00137690373901658"	"18"	"0"	"0.0001744"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLWDYTFGPEK"	"[K].hLWDYTFGPEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"617.66638"	"1850.98459"	"1850.98414"	"0.24"	"0.00015"	"8/92"	"8"	"92"	"27440504.3100586"	"HCD"	"MS2"	"20.42878"	"355.7"	"50.741"	"51.3295"	"15381"	"15381"	"15362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"485.5"	""	"498.7"	""	"498.5"	""	"580.4"	"4.5"	"613.8"	"687.4"	""	"1231"	"54"	"37.000"	"30.000"	"0.00024959050356848"	"18"	"0"	"1.09E-05"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLWDYTFGPEK"	"[K].hLWDYTFGPEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"617.66638"	"1850.98459"	"1850.98414"	"0.24"	"0.00015"	"8/92"	"8"	"92"	"26728432.1337891"	"HCD"	"MS2"	"28.27822"	"382.3"	"54.909"	"51.4879"	"15496"	"15496"	"15478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"530.1"	""	"526.6"	""	"520.0"	""	"605.9"	"1.5"	"693.6"	"744.7"	""	"1231"	"54"	"37.000"	"30.000"	"0.00025599298075907"	"16"	"0"	"2.827E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLWDYTFGPEK"	"[K].hLWDYTFGPEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"617.66650"	"1850.98496"	"1850.98414"	"0.44"	"0.00027"	"10/92"	"10"	"92"	"3810086.77252197"	"HCD"	"MS2"	"31.9377"	"124.0"	"100.000"	"51.8151"	"15630"	"15630"	"15606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.4"	""	"163.2"	""	"176.4"	""	"198.1"	"1.1"	"217.6"	"245.3"	""	"1220"	"26"	"37.000"	"30.000"	"0.150428399571295"	"16"	"0"	"0.0001563"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLWDYTFGPEK"	"[K].hLWDYTFGPEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"925.99707"	"1850.98686"	"1850.98414"	"1.47"	"0.00136"	"10/92"	"10"	"92"	"466994.256958008"	"HCD"	"MS2"	"0"	"48.5"	"100.000"	"51.3962"	"15409"	"15409"	"15378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.9"	""	"65.3"	""	"70.0"	""	"76.2"	"0.7"	"83.7"	"81.1"	""	"1237"	"27"	"37.000"	"30.000"	"0.128925761119567"	"14"	"0.0001889"	"0.0003847"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNTYLVELSSLLVR"	"[K].dNTYLVELSSLLVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"617.68573"	"1851.04264"	"1851.04249"	"0.08"	"0.00005"	"11/146"	"11"	"146"	"127013.817260742"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"89.1900"	"30726"	"30726"	"30711"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"5.7"	""	"3.7"	""	"4.4"	""	"6.0"	"5.8"	""	"968"	"35"	"36.000"	"29.000"	"0.015305423875215"	"15"	"0.0001889"	"0.0005763"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEYLEDIDLK"	"[K].aALEYLEDIDLk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"926.02936"	"1851.05144"	"1851.05155"	"-0.06"	"-0.00006"	"10/100"	"10"	"100"	"207207.344238281"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"77.0256"	"25832"	"25832"	"25801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.9"	""	"20.3"	""	"22.6"	""	"29.3"	""	"42.1"	"37.6"	""	"889"	"39"	"36.000"	"29.000"	"0.00573946967121216"	"24"	"0.0001889"	"0.000584"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEYLEDIDLK"	"[K].aALEYLEDIDLk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"926.03052"	"1851.05376"	"1851.05155"	"1.19"	"0.00110"	"12/100"	"12"	"100"	"178313.300231934"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"77.0382"	"25888"	"25888"	"25861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"18.3"	""	"24.1"	""	"25.1"	"1.0"	"25.0"	"32.4"	""	"891"	"36"	"36.000"	"29.000"	"0.0124407828127124"	"20"	"0.0001859"	"0.0003196"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPNGVVLAPVQLGK"	"[R].tPNGVVLAPVQLGk.[W]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"926.07593"	"1851.14458"	"1851.14679"	"-1.19"	"-0.00111"	"18/126"	"18"	"126"	"366079.22076416"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"54.6519"	"16719"	"16719"	"16688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.8"	""	"29.2"	""	"30.3"	""	"40.6"	"1.1"	"44.2"	"47.4"	""	"333"	"62"	"32.000"	"25.000"	"1.11535787467852E-05"	"17"	"0"	"2.649E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPNGVVLAPVQLGK"	"[R].tPNGVVLAPVQLGk.[W]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"926.07684"	"1851.14641"	"1851.14679"	"-0.21"	"-0.00019"	"8/126"	"8"	"126"	"163921.21887207"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"54.9200"	"16882"	"16882"	"16853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.3"	""	"13.4"	""	"18.6"	""	"18.6"	""	"23.4"	"23.2"	""	"337"	"37"	"32.000"	"25.000"	"0.00377224511848765"	"15"	"0.0001889"	"0.0004082"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPNGVVLAPVQLGK"	"[R].tPNGVVLAPVQLGk.[W]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.4800"	"0.0000"	"1"	"1"	"1"	"617.72046"	"1851.14682"	"1851.14679"	"0.02"	"0.00001"	"13/126"	"13"	"126"	"2189224.12750244"	"HCD"	"MS2"	"43.53773"	"114.2"	"100.000"	"54.7852"	"16773"	"16773"	"16752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.3"	""	"145.0"	""	"144.1"	""	"187.6"	""	"217.2"	"241.6"	""	"337"	"25"	"32.000"	"25.000"	"0.0485959308276833"	""	"0"	"0.0001388"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPNGVVLAPVQLGK"	"[R].tPNGVVLAPVQLGk.[W]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"617.72070"	"1851.14756"	"1851.14679"	"0.41"	"0.00026"	"15/126"	"15"	"126"	"3544270.02618408"	"HCD"	"MS2"	"43.81594"	"141.0"	"100.000"	"54.7139"	"16744"	"16744"	"16720"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.3"	"3.1"	"184.1"	""	"198.5"	""	"221.3"	"1.1"	"267.8"	"281.4"	""	"312"	"38"	"31.000"	"24.000"	"0.00266148852684487"	"22"	"0"	"2.034E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENVDHLGFFIYR"	"[R].iENVDHLGFFIYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIE8"	"Integral membrane protein 2B OS=Rattus norvegicus OX=10116 GN=Itm2b PE=2 SV=1"	"Q5XIE8"	"Integral membrane protein 2B OS=Rattus norvegicus OX=10116 GN=Itm2b PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"618.00281"	"1851.99387"	"1851.99548"	"-0.87"	"-0.00054"	"5/122"	"5"	"122"	"1941378.04553223"	"HCD"	"MS2"	"82.91971"	"87.6"	"100.000"	"63.0731"	"20208"	"20208"	"20179"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.8"	""	"120.9"	""	"110.4"	""	"142.6"	""	"171.8"	"169.9"	""	"1116"	"3"	"37.000"	"30.000"	"30.1046927363441"	"13"	"0.0001308"	"0.0002839"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVFLDPLAGAVTK"	"[K].yVFLDPLAGAVTk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"926.55145"	"1852.09563"	"1852.09844"	"-1.52"	"-0.00141"	"14/110"	"14"	"110"	"224104.29083252"	"HCD"	"MS2"	"16.39645"	"15.1"	"100.000"	"76.3237"	"25552"	"25552"	"25521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.2"	""	"21.5"	""	"22.3"	""	"25.4"	""	"30.4"	"25.6"	""	"612"	"56"	"34.000"	"27.000"	"7.95648826328573E-05"	"16"	"0"	"4.269E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVFLDPLAGAVTK"	"[K].yVFLDPLAGAVTk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"618.03680"	"1852.09586"	"1852.09844"	"-1.39"	"-0.00086"	"12/110"	"12"	"110"	"1152775.03082275"	"HCD"	"MS2"	"1.863767"	"38.2"	"100.000"	"76.2985"	"25592"	"25592"	"25567"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.8"	""	"52.6"	""	"54.9"	""	"66.8"	"0.4"	"71.9"	"70.4"	""	"612"	"54"	"34.000"	"27.000"	"0.000132044837509296"	"18"	"0"	"2.666E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVFLDPLAGAVTK"	"[K].yVFLDPLAGAVTk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"926.55200"	"1852.09673"	"1852.09844"	"-0.93"	"-0.00086"	"11/110"	"11"	"110"	"148398.686035156"	"HCD"	"MS2"	"12.5765"	"12.1"	"100.000"	"76.3706"	"25621"	"25621"	"25599"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.7"	""	"18.4"	""	"19.5"	""	"20.7"	""	"22.4"	"17.8"	""	"620"	"46"	"34.000"	"27.000"	"0.000817262729605868"	"15"	"0.0001308"	"0.0003064"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVFLDPLAGAVTK"	"[K].yVFLDPLAGAVTk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"618.03711"	"1852.09677"	"1852.09844"	"-0.90"	"-0.00056"	"13/110"	"13"	"110"	"1128736.76312256"	"HCD"	"MS2"	"5.334756"	"36.2"	"100.000"	"76.3054"	"25544"	"25544"	"25521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.6"	""	"42.8"	""	"51.5"	""	"58.6"	""	"70.9"	"72.9"	""	"620"	"58"	"34.000"	"27.000"	"5.09755234196628E-05"	"19"	"0"	"3.781E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPNGVVLAPVQLGK"	"[R].tPnGVVLAPVQLGk.[W]"	"N-Term(TMT6plex); N3(Deamidated); K14(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"618.04779"	"1852.12882"	"1852.13081"	"-1.07"	"-0.00066"	"14/126"	"14"	"126"	"4468357.31280518"	"HCD"	"MS2"	"23.33113"	"150.2"	"100.000"	"57.3413"	"17872"	"17872"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"218.4"	""	"200.4"	""	"209.5"	""	"255.4"	"1.4"	"270.9"	"266.2"	""	"388"	"31"	"32.000"	"25.000"	"0.014414571275196"	"20"	"0.0001308"	"0.0002569"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPNGVVLAPVQLGK"	"[R].tPnGVVLAPVQLGk.[W]"	"N-Term(TMT6plex); N3(Deamidated); K14(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"618.04877"	"1852.13175"	"1852.13081"	"0.51"	"0.00031"	"16/126"	"16"	"126"	"4228899.62512207"	"HCD"	"MS2"	"21.18917"	"128.6"	"100.000"	"57.1399"	"17736"	"17736"	"17707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.9"	""	"171.9"	""	"175.5"	""	"223.3"	""	"245.1"	"235.4"	""	"371"	"43"	"32.000"	"25.000"	"0.000871653571462674"	"21"	"0"	"3.191E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVLIGSPLVGQPK"	"[K].wVLIGSPLVGQPk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"618.05273"	"1852.14365"	"1852.14606"	"-1.30"	"-0.00080"	"11/100"	"11"	"100"	"2110096.0402832"	"HCD"	"MS2"	"9.143323"	"52.4"	"100.000"	"73.2149"	"24339"	"24339"	"24319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.0"	""	"73.6"	""	"64.2"	""	"87.9"	""	"112.9"	"112.7"	""	"285"	"35"	"31.000"	"24.000"	"0.00460060412344051"	"16"	"0"	"6.937E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVLIGSPLVGQPK"	"[K].wVLIGSPLVGQPk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"618.05316"	"1852.14493"	"1852.14606"	"-0.61"	"-0.00038"	"10/100"	"10"	"100"	"1823170.89093018"	"HCD"	"MS2"	"9.908897"	"47.5"	"100.000"	"73.2679"	"24309"	"24309"	"24289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.8"	""	"68.3"	""	"63.2"	""	"77.3"	"0.0"	"94.9"	"98.4"	""	"283"	"21"	"31.000"	"24.000"	"0.113176547083495"	"15"	"0"	"0.0001772"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVLIGSPLVGQPK"	"[K].wVLIGSPLVGQPk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"926.57611"	"1852.14495"	"1852.14606"	"-0.60"	"-0.00056"	"13/100"	"13"	"100"	"434438.139831543"	"HCD"	"MS2"	"10.60381"	"25.6"	"100.000"	"73.0529"	"24222"	"24222"	"24193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.0"	""	"31.9"	""	"27.5"	""	"51.3"	"2.0"	"52.9"	"59.2"	""	"283"	"46"	"31.000"	"24.000"	"0.000319710161486268"	"15"	"0.0001889"	"0.0005283"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVLIGSPLVGQPK"	"[K].wVLIGSPLVGQPk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"926.57611"	"1852.14495"	"1852.14606"	"-0.60"	"-0.00056"	"12/100"	"12"	"100"	"438922.33026123"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"72.9980"	"24251"	"24251"	"24223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"31.3"	""	"25.0"	""	"49.7"	""	"63.4"	"57.0"	""	"283"	"43"	"31.000"	"24.000"	"0.000756408568546715"	"15"	"0.0001308"	"0.0002921"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVLIGSPLVGQPK"	"[K].wVLIGSPLVGQPk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"618.05347"	"1852.14585"	"1852.14606"	"-0.12"	"-0.00007"	"13/100"	"13"	"100"	"2411526.82574463"	"HCD"	"MS2"	"40.96379"	"61.7"	"100.000"	"72.9676"	"24187"	"24187"	"24161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.7"	""	"70.0"	""	"86.5"	""	"106.8"	""	"136.1"	"123.9"	""	"284"	"41"	"31.000"	"24.000"	"0.00117297388839959"	"17"	"0"	"6.301E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVLIGSPLVGQPK"	"[K].wVLIGSPLVGQPk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"618.05371"	"1852.14658"	"1852.14606"	"0.28"	"0.00017"	"9/100"	"9"	"100"	"1852914.76837158"	"HCD"	"MS2"	"48.01319"	"49.8"	"100.000"	"72.9149"	"24217"	"24217"	"24191"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.4"	""	"54.8"	""	"73.3"	""	"90.7"	""	"103.5"	"102.6"	""	"285"	"32"	"31.000"	"24.000"	"0.0100418762327818"	"16"	"0"	"0.000115"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFSDGHSEFLK"	"[R].dLFSDGHSEFLk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"618.33301"	"1852.98447"	"1852.98453"	"-0.03"	"-0.00002"	"12/104"	"12"	"104"	"8878386.16784668"	"HCD"	"MS2"	"12.7045"	"349.1"	"100.000"	"49.4663"	"14629"	"14629"	"14607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"470.6"	""	"417.1"	""	"464.8"	""	"634.9"	"2.0"	"669.4"	"651.2"	""	"1163"	"32"	"37.000"	"30.000"	"0.0352817175655716"	"15"	"0"	"4.101E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFSDGHSEFLK"	"[R].dLFSDGHSEFLk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"618.33307"	"1852.98465"	"1852.98453"	"0.06"	"0.00004"	"14/104"	"14"	"104"	"10603763.4888306"	"HCD"	"MS2"	"24.38692"	"427.7"	"100.000"	"49.7107"	"14772"	"14772"	"14750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"551.6"	""	"501.1"	""	"557.8"	""	"832.6"	""	"799.4"	"813.1"	""	"1162"	"45"	"37.000"	"30.000"	"0.00172653796443979"	"17"	"0"	"5.763E-06"	"1.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGTQPLEVLEAVQR"	"[R].lAGTQPLEVLEAVQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"618.36182"	"1853.07090"	"1853.06938"	"0.82"	"0.00051"	"17/146"	"17"	"146"	"1610974.41387939"	"HCD"	"MS2"	"36.69822"	"38.1"	"100.000"	"67.5756"	"22037"	"22037"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.8"	""	"48.6"	""	"54.7"	""	"49.8"	"1.8"	"67.3"	"74.0"	""	"826"	"43"	"36.000"	"29.000"	"0.002055654160963"	"22"	"0"	"8.893E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGTQPLEVLEAVQR"	"[R].lAGTQPLEVLEAVQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"618.36194"	"1853.07126"	"1853.06938"	"1.02"	"0.00063"	"7/146"	"7"	"146"	"1386661.68737793"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"67.7763"	"22068"	"22068"	"22042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.6"	""	"58.6"	""	"52.4"	""	"50.3"	"2.5"	"74.1"	"85.4"	""	"837"	"50"	"36.000"	"29.000"	"0.000392369699898481"	"19"	"0"	"7.536E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMGFIGHYLDQK"	"[R].sMGFIGHYLDQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.3846"	"0.0000"	"1"	"1"	"1"	"618.67053"	"1853.99704"	"1853.99841"	"-0.74"	"-0.00046"	"11/108"	"11"	"108"	"18200163.1804199"	"HCD"	"MS2"	"73.68368"	"417.9"	"51.950"	"51.2947"	"15417"	"15417"	"15398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"706.0"	""	"640.7"	""	"624.1"	""	"536.8"	""	"690.3"	"757.5"	""	"1104"	"13"	"37.000"	"30.000"	"2.94400862309167"	"21"	"0.0001308"	"0.0002446"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMGFIGHYLDQK"	"[R].sMGFIGHYLDQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"618.67126"	"1853.99924"	"1853.99841"	"0.45"	"0.00028"	"7/108"	"7"	"108"	"13696997.8926392"	"HCD"	"MS2"	"43.50052"	"573.3"	"100.000"	"51.0922"	"15284"	"15284"	"15266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"887.5"	""	"819.4"	""	"848.3"	""	"840.1"	""	"968.7"	"1069.0"	""	"1115"	"3"	"37.000"	"30.000"	"25.4826665710293"	"15"	"0.0001889"	"0.0004426"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYSQHDMNK"	"[R].kYSQHDmNk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"618.67603"	"1854.01352"	"1854.01468"	"-0.62"	"-0.00039"	"9/86"	"9"	"86"	"427460.842041016"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"21.9010"	"3475"	"3475"	"3459"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.5"	""	"24.9"	""	"34.5"	""	"54.8"	""	"46.3"	"45.4"	""	"1063"	"5"	"37.000"	"30.000"	"16.311851868299"	"13"	"0.005975"	"0.2009"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALMDEQGKK"	"[R].fALMDEQGkk.[S]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"618.69678"	"1854.07578"	"1854.07622"	"-0.24"	"-0.00015"	"15/80"	"15"	"80"	"5192120.73138428"	"HCD"	"MS2"	"64.36694"	"416.4"	"100.000"	"40.2884"	"10892"	"10892"	"10869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"937.0"	""	"677.2"	""	"526.3"	""	"505.9"	"5.6"	"660.5"	"617.8"	""	"764"	"11"	"35.000"	"28.000"	"3.38114162955379"	"13"	"0.0001308"	"0.0002082"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYAVLYDIILK"	"[R].nAYAVLYDIILk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"618.70911"	"1854.11277"	"1854.11409"	"-0.72"	"-0.00044"	"12/110"	"12"	"110"	"246182.625671387"	"HCD"	"MS2"	"4.289143"	"8.2"	"100.000"	"90.4360"	"31227"	"31227"	"31217"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.2"	""	"8.7"	""	"14.9"	""	"16.5"	""	"15.4"	"13.7"	""	"500"	"27"	"33.000"	"26.000"	"0.0471997837274073"	"18"	"0.0001889"	"0.0004128"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYAVLYDIILK"	"[R].nAYAVLYDIILk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"618.70911"	"1854.11277"	"1854.11409"	"-0.72"	"-0.00044"	"14/110"	"14"	"110"	"567617.172851563"	"HCD"	"MS2"	"4.837395"	"16.8"	"100.000"	"90.7008"	"31319"	"31319"	"31311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.9"	""	"21.9"	""	"27.8"	""	"25.6"	""	"31.6"	"32.7"	""	"500"	"47"	"33.000"	"26.000"	"0.00048077293222754"	"25"	"0"	"8.88E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYAVLYDIILK"	"[R].nAYAVLYDIILk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"927.56012"	"1854.11296"	"1854.11409"	"-0.61"	"-0.00056"	"9/110"	"9"	"110"	"88666.4584350586"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"90.4245"	"31222"	"31222"	"31217"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.6"	""	"6.6"	""	"11.8"	""	"12.3"	""	"12.9"	"10.4"	""	"494"	"29"	"33.000"	"26.000"	"0.0313110010866888"	"16"	"0.0002277"	"0.001165"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYAVLYDIILK"	"[R].nAYAVLYDIILk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"927.56036"	"1854.11345"	"1854.11409"	"-0.35"	"-0.00032"	"15/110"	"15"	"110"	"195866.425292969"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"90.6800"	"31312"	"31312"	"31309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.0"	""	"16.6"	""	"19.3"	""	"19.9"	""	"25.1"	"18.9"	""	"486"	"61"	"33.000"	"26.000"	"2.14094876140948E-05"	""	"0"	"4.465E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYAVLYDIILK"	"[R].nAYAVLYDIILk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"927.56042"	"1854.11357"	"1854.11409"	"-0.28"	"-0.00026"	"15/110"	"15"	"110"	"227237.953979492"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"90.5269"	"31233"	"31233"	"31229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.6"	""	"23.5"	""	"23.1"	""	"29.2"	""	"29.8"	"39.5"	""	"489"	"58"	"33.000"	"26.000"	"3.8572595544149E-05"	"26"	"0"	"5.009E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYAVLYDIILK"	"[R].nAYAVLYDIILk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"618.70947"	"1854.11386"	"1854.11409"	"-0.12"	"-0.00008"	"12/110"	"12"	"110"	"581241.673217773"	"HCD"	"MS2"	"3.36659"	"16.7"	"100.000"	"90.5811"	"31252"	"31252"	"31248"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.9"	""	"19.6"	""	"24.4"	""	"31.7"	""	"29.7"	"37.0"	""	"487"	"44"	"33.000"	"26.000"	"0.00103157062233063"	"23"	"0"	"2.373E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYAVLYDIILK"	"[R].nAYAVLYDIILk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"618.70966"	"1854.11441"	"1854.11409"	"0.17"	"0.00011"	"11/110"	"11"	"110"	"366167.812011719"	"HCD"	"MS2"	"10.24476"	"11.5"	"100.000"	"90.3234"	"31156"	"31156"	"31142"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.3"	""	"17.0"	""	"15.2"	""	"24.8"	""	"17.3"	"21.8"	""	"488"	"34"	"33.000"	"26.000"	"0.0107495386695599"	"18"	"0"	"0.0001104"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAYAVLYDIILK"	"[R].nAYAVLYDIILk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"927.56134"	"1854.11540"	"1854.11409"	"0.71"	"0.00066"	"7/110"	"7"	"110"	"94987.1682128906"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"90.2747"	"31139"	"31139"	"31124"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	"2.8"	""	"8.6"	""	"8.1"	""	"10.2"	"9.2"	""	"484"	"41"	"33.000"	"26.000"	"0.00207881272204306"	"15"	"0.0003571"	"0.001494"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTQPLIASYSASK"	"[K].mTQPLIASYSASk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"928.02209"	"1855.03691"	"1855.03994"	"-1.63"	"-0.00151"	"17/136"	"17"	"136"	"952270.145568848"	"HCD"	"MS2"	"0"	"73.9"	"100.000"	"47.0824"	"13654"	"13654"	"13624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.7"	""	"121.3"	""	"109.9"	""	"81.3"	""	"145.7"	"155.3"	""	"995"	"46"	"36.000"	"29.000"	"0.00118247804259588"	"15"	"0"	"1.391E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTQPLIASYSASK"	"[K].mTQPLIASYSASk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.01819"	"1855.04001"	"1855.03994"	"0.04"	"0.00002"	"16/136"	"16"	"136"	"5890463.13098145"	"HCD"	"MS2"	"5.452719"	"172.8"	"100.000"	"47.0064"	"13623"	"13623"	"13592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.1"	""	"264.6"	""	"256.1"	""	"234.2"	""	"336.7"	"327.0"	""	"1009"	"59"	"37.000"	"30.000"	"6.98009238191262E-05"	"17"	"0"	"1.788E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTQPLIASYSASK"	"[K].mTQPLIASYSASk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"928.02405"	"1855.04082"	"1855.03994"	"0.47"	"0.00044"	"14/136"	"14"	"136"	"1062444.71691895"	"HCD"	"MS2"	"0"	"81.8"	"100.000"	"47.3437"	"13809"	"13809"	"13778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.4"	""	"135.5"	""	"127.6"	""	"99.9"	""	"162.0"	"155.5"	""	"984"	"48"	"36.000"	"29.000"	"0.000712795751944022"	"21"	"0"	"2.711E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTQPLIASYSASK"	"[K].mTQPLIASYSASk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.01849"	"1855.04093"	"1855.03994"	"0.53"	"0.00033"	"16/136"	"16"	"136"	"6583508.71704102"	"HCD"	"MS2"	"13.22128"	"189.0"	"100.000"	"47.3023"	"13792"	"13792"	"13762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"253.8"	""	"278.8"	""	"283.5"	""	"255.7"	"4.0"	"363.6"	"351.5"	""	"994"	"56"	"36.000"	"29.000"	"0.000120325143622788"	"16"	"0"	"2.752E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEIVQPIISK"	"[K].eLEEIVQPIISk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8431"	"0.0000"	"1"	"1"	"1"	"619.37604"	"1856.11356"	"1856.11449"	"-0.50"	"-0.00031"	"12/118"	"12"	"118"	"4770955.84320068"	"HCD"	"MS2"	"5.885706"	"108.2"	"100.000"	"68.8921"	"22574"	"22574"	"22554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.6"	""	"120.9"	""	"132.6"	""	"191.5"	""	"205.9"	"224.8"	""	"469"	"51"	"33.000"	"26.000"	"0.000190608756040481"	"23"	"0"	"5.988E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEIVQPIISK"	"[K].eLEEIVQPIISk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9701"	"0.0000"	"1"	"1"	"1"	"928.56055"	"1856.11382"	"1856.11449"	"-0.36"	"-0.00033"	"17/118"	"17"	"118"	"761631.143249512"	"HCD"	"MS2"	"0"	"46.1"	"100.000"	"69.0593"	"22591"	"22591"	"22570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.1"	""	"48.8"	""	"59.1"	""	"83.6"	""	"88.3"	"88.4"	""	"471"	"67"	"33.000"	"26.000"	"4.42579110357169E-06"	"18"	"0"	"2.689E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEIVQPIISK"	"[K].eLEEIVQPIISk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"928.56067"	"1856.11406"	"1856.11449"	"-0.23"	"-0.00021"	"15/118"	"15"	"118"	"592328.68951416"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"68.8710"	"22566"	"22566"	"22538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.7"	""	"31.1"	""	"43.6"	""	"71.5"	"1.7"	"74.8"	"65.9"	""	"471"	"51"	"33.000"	"26.000"	"0.000209889595930497"	"17"	"0"	"2.183E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEIVQPIISK"	"[K].eLEEIVQPIISk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8163"	"0.0000"	"1"	"1"	"1"	"619.37640"	"1856.11466"	"1856.11449"	"0.09"	"0.00006"	"12/118"	"12"	"118"	"4480281.58679199"	"HCD"	"MS2"	"3.588645"	"102.9"	"100.000"	"69.1329"	"22621"	"22621"	"22602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.4"	""	"115.8"	""	"135.6"	""	"178.6"	"0.7"	"186.5"	"208.4"	""	"469"	"49"	"33.000"	"26.000"	"0.000321471774165658"	"25"	"0"	"4.184E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILGTNTIMDK"	"[K].yNILGTNTImDk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.8592"	"0.0000"	"1"	"1"	"1"	"929.01288"	"1857.01848"	"1857.01921"	"-0.39"	"-0.00036"	"19/118"	"19"	"118"	"1059976.81951904"	"HCD"	"MS2"	"0"	"77.1"	"100.000"	"49.0889"	"14475"	"14475"	"14447"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.2"	""	"54.2"	""	"65.1"	""	"244.0"	""	"152.7"	"137.2"	""	"1149"	"71"	"37.000"	"30.000"	"4.86732149423773E-06"	"27"	"0"	"8.399E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILGTNTIMDK"	"[K].yNILGTNTImDk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.8615"	"0.0000"	"1"	"1"	"1"	"929.01312"	"1857.01897"	"1857.01921"	"-0.13"	"-0.00012"	"10/118"	"10"	"118"	"1542327.67822266"	"HCD"	"MS2"	"0"	"105.1"	"100.000"	"49.4466"	"14665"	"14665"	"14638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.7"	""	"87.3"	""	"93.6"	""	"309.8"	"1.9"	"202.2"	"194.8"	""	"1139"	"65"	"37.000"	"30.000"	"1.82597038030586E-05"	"26"	"0.0001308"	"0.000245"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPDAPLALEANK"	"[K].lFPDAPLALEANk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"619.70068"	"1857.08750"	"1857.08861"	"-0.60"	"-0.00037"	"14/110"	"14"	"110"	"3053487.42169189"	"HCD"	"MS2"	"19.76475"	"80.8"	"100.000"	"68.6749"	"22486"	"22486"	"22458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.2"	""	"80.4"	""	"86.3"	""	"154.7"	"1.2"	"174.0"	"159.1"	""	"690"	"36"	"35.000"	"28.000"	"0.00956795436104884"	"18"	"0.0001889"	"0.0005037"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPDAPLALEANK"	"[K].lFPDAPLALEANk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"619.70093"	"1857.08823"	"1857.08861"	"-0.20"	"-0.00013"	"15/110"	"15"	"110"	"2994088.87213135"	"HCD"	"MS2"	"29.66138"	"77.2"	"100.000"	"68.8241"	"22495"	"22495"	"22474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.2"	""	"81.1"	""	"83.4"	""	"131.1"	""	"161.5"	"170.9"	""	"684"	"41"	"35.000"	"28.000"	"0.00289751775636084"	"23"	"0"	"5.798E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPDAPLALEANK"	"[K].lFPDAPLALEANk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"929.04779"	"1857.08830"	"1857.08861"	"-0.16"	"-0.00015"	"8/110"	"8"	"110"	"212170.154663086"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"68.8862"	"22521"	"22521"	"22490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.6"	""	"17.5"	""	"17.9"	""	"40.3"	""	"35.4"	"33.0"	""	"684"	"21"	"35.000"	"28.000"	"0.277988036528122"	"17"	"0.0008125"	"0.007866"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINYEEFKK"	"[R].vINYEEFkk.[A]"	"N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.70715"	"1857.10691"	"1857.10890"	"-1.07"	"-0.00066"	"9/78"	"9"	"78"	"18156527.0209961"	"HCD"	"MS2"	"15.07494"	"422.1"	"33.862"	"43.9535"	"12379"	"12379"	"12358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"684.2"	""	"641.8"	""	"703.5"	""	"634.1"	""	"596.5"	"728.1"	""	"555"	"15"	"34.000"	"27.000"	"0.895907118775256"	"13"	"0.0001889"	"0.0007622"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINYEEFKK"	"[R].vINYEEFkk.[A]"	"N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.70764"	"1857.10837"	"1857.10890"	"-0.28"	"-0.00018"	"9/78"	"9"	"78"	"25328047.4038086"	"HCD"	"MS2"	"1.79845"	"570.3"	"30.644"	"44.1921"	"12526"	"12526"	"12508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"872.1"	""	"862.0"	""	"939.1"	""	"886.8"	""	"846.4"	"988.3"	""	"547"	"7"	"34.000"	"27.000"	"5.83387783745589"	"13"	"0.0001889"	"0.0009989"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLADISSLLQIEPR"	"[K].sSLADISSLLQIEPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"620.00995"	"1858.01529"	"1858.04831"	"-17.77"	"-0.01101"	"16/144"	"16"	"144"	"755488.693054199"	"HCD"	"MS2"	"48.50241"	"21.6"	"100.000"	"78.7831"	"26600"	"26600"	"26575"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.3"	""	"34.0"	""	"31.5"	""	"31.7"	""	"38.8"	"42.2"	""	"1161"	"36"	"37.000"	"30.000"	"0.0151635966622874"	"27"	"0"	"5.461E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLADISSLLQIEPR"	"[K].sSLADISSLLQIEPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"0"	"3"	"3"	"0.7179"	"0.0000"	"1"	"1"	"1"	"620.02271"	"1858.05356"	"1858.04831"	"2.83"	"0.00175"	"16/144"	"16"	"144"	"742915.318725586"	"HCD"	"MS2"	"33.80103"	"20.1"	"100.000"	"78.8255"	"26566"	"26566"	"26545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.9"	""	"21.3"	""	"30.2"	""	"30.0"	""	"37.4"	"46.7"	""	"1027"	"39"	"37.000"	"30.000"	"0.00580150202184482"	"26"	"0"	"8.275E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQVVNIPSFIVR"	"[R].kQVVNIPSFIVR.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.06030"	"1858.16635"	"1858.16786"	"-0.81"	"-0.00050"	"11/110"	"11"	"110"	"3916209.4864502"	"HCD"	"MS2"	"30.37462"	"149.2"	"100.000"	"51.5874"	"15487"	"15487"	"15458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.5"	""	"220.0"	""	"229.2"	""	"212.9"	"1.7"	"255.9"	"254.1"	""	"228"	"26"	"30.000"	"23.000"	"0.0285039371233393"	"14"	"0"	"3.46E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDSSFSPNTGK"	"[K].lTFDSSFSPNTGk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"930.00189"	"1858.99651"	"1858.99510"	"0.76"	"0.00070"	"17/120"	"17"	"120"	"570927.792236328"	"HCD"	"MS2"	"0"	"54.5"	"100.000"	"52.4553"	"15892"	"15892"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.4"	""	"77.8"	""	"80.4"	""	"84.2"	""	"92.1"	"122.4"	""	"1235"	"55"	"37.000"	"30.000"	"0.000216589282165711"	"22"	"0"	"8.201E-06"	"1.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFTYEWTVPK"	"[K].eTFTYEWTVPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"930.00287"	"1858.99846"	"1858.99912"	"-0.36"	"-0.00033"	"9/94"	"9"	"94"	"1923491.98693848"	"HCD"	"MS2"	"0"	"128.3"	"100.000"	"59.9588"	"18936"	"18936"	"18916"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.1"	""	"214.6"	""	"143.6"	""	"202.7"	"1.2"	"232.4"	"218.3"	""	"1227"	"53"	"37.000"	"30.000"	"0.000330228511573743"	"18"	"0"	"7.909E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFTYEWTVPK"	"[K].eTFTYEWTVPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"620.33789"	"1858.99912"	"1858.99912"	"0.00"	"0.00000"	"8/94"	"8"	"94"	"10558099.9487305"	"HCD"	"MS2"	"17.2948"	"255.2"	"82.467"	"59.8965"	"18858"	"18858"	"18841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.8"	""	"399.9"	""	"338.5"	""	"392.2"	"14.7"	"463.0"	"429.8"	""	"1223"	"25"	"37.000"	"30.000"	"0.211055396603876"	"16"	"7.476E-05"	"0.0001916"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFTYEWTVPK"	"[K].eTFTYEWTVPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"930.00470"	"1859.00212"	"1858.99912"	"1.61"	"0.00150"	"9/94"	"9"	"94"	"1825234.56738281"	"HCD"	"MS2"	"0"	"127.8"	"100.000"	"59.7930"	"18815"	"18815"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.0"	""	"215.9"	""	"146.4"	""	"218.2"	"1.5"	"211.8"	"218.2"	""	"1226"	"55"	"37.000"	"30.000"	"0.000191187931504958"	"23"	"0"	"8.77E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGGIDFNQPLVITR"	"[R].lSGGIDFNQPLVITR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HS7"	"PDZ and LIM domain protein 3 OS=Rattus norvegicus OX=10116 GN=Pdlim3 PE=1 SV=2"	"Q66HS7"	"PDZ and LIM domain protein 3 OS=Rattus norvegicus OX=10116 GN=Pdlim3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"930.03278"	"1859.05828"	"1859.05881"	"-0.29"	"-0.00027"	"12/150"	"12"	"150"	"654946.067749023"	"HCD"	"MS2"	"0"	"42.0"	"100.000"	"64.7228"	"20882"	"20882"	"20851"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.3"	""	"61.5"	""	"64.0"	""	"58.8"	""	"74.5"	"90.8"	""	"960"	"51"	"36.000"	"29.000"	"0.000353379406797473"	"16"	"0"	"9.659E-06"	"1.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGGIDFNQPLVITR"	"[R].lSGGIDFNQPLVITR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HS7"	"PDZ and LIM domain protein 3 OS=Rattus norvegicus OX=10116 GN=Pdlim3 PE=1 SV=2"	"Q66HS7"	"PDZ and LIM domain protein 3 OS=Rattus norvegicus OX=10116 GN=Pdlim3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"930.03351"	"1859.05974"	"1859.05881"	"0.50"	"0.00046"	"8/150"	"8"	"150"	"542468.809448242"	"HCD"	"MS2"	"0"	"34.4"	"100.000"	"64.8164"	"20867"	"20867"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.8"	""	"42.6"	""	"52.0"	""	"49.8"	""	"63.8"	"71.1"	""	"913"	"40"	"36.000"	"29.000"	"0.00452314782843548"	"15"	"0"	"2.396E-05"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQSILELGSLLAK"	"[K].eQSILELGSLLAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"930.06488"	"1859.12248"	"1859.12539"	"-1.56"	"-0.00145"	"15/134"	"15"	"134"	"278512.12878418"	"HCD"	"MS2"	"17.00205"	"23.3"	"100.000"	"80.7516"	"27403"	"27403"	"27374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.3"	""	"22.8"	""	"28.8"	""	"40.9"	""	"47.9"	"45.2"	""	"568"	"66"	"34.000"	"27.000"	"7.31675208588731E-06"	"21"	"0"	"1.708E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQSILELGSLLAK"	"[K].eQSILELGSLLAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"620.37909"	"1859.12271"	"1859.12539"	"-1.44"	"-0.00089"	"16/134"	"16"	"134"	"2169689.74029541"	"HCD"	"MS2"	"18.79783"	"52.6"	"100.000"	"80.7285"	"27393"	"27393"	"27374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.2"	""	"74.4"	""	"68.4"	""	"89.2"	"0.7"	"102.3"	"95.9"	""	"568"	"54"	"34.000"	"27.000"	"0.000103351870260127"	"24"	"0"	"6.367E-06"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQSILELGSLLAK"	"[K].eQSILELGSLLAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"930.06537"	"1859.12346"	"1859.12539"	"-1.04"	"-0.00096"	"12/134"	"12"	"134"	"357542.506408691"	"HCD"	"MS2"	"10.19723"	"27.9"	"100.000"	"80.7937"	"27369"	"27369"	"27344"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.9"	""	"37.4"	""	"39.6"	""	"47.5"	""	"56.4"	"50.8"	""	"563"	"39"	"34.000"	"27.000"	"0.00384130152949782"	"18"	"0.0001308"	"0.0002249"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQSILELGSLLAK"	"[K].eQSILELGSLLAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"620.37939"	"1859.12363"	"1859.12539"	"-0.94"	"-0.00059"	"15/134"	"15"	"134"	"2168919.64642334"	"HCD"	"MS2"	"13.12207"	"54.7"	"100.000"	"80.7383"	"27346"	"27346"	"27328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.0"	""	"68.7"	""	"76.9"	""	"98.8"	"1.7"	"94.7"	"99.1"	""	"562"	"58"	"34.000"	"27.000"	"4.57832185171761E-05"	"20"	"0"	"7.637E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQSILELGSLLAK"	"[K].eQSILELGSLLAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"620.37970"	"1859.12455"	"1859.12539"	"-0.45"	"-0.00028"	"12/134"	"12"	"134"	"840763.160583496"	"HCD"	"MS2"	"13.48884"	"23.8"	"100.000"	"81.0817"	"27537"	"27537"	"27518"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.1"	""	"29.1"	""	"28.2"	""	"44.8"	""	"44.8"	"49.6"	""	"558"	"22"	"34.000"	"27.000"	"0.195706028259172"	"24"	"0"	"0.0001614"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQSILELGSLLAK"	"[K].eQSILELGSLLAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"930.06592"	"1859.12456"	"1859.12539"	"-0.44"	"-0.00041"	"5/134"	"5"	"134"	"80411.5059814453"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"81.1121"	"27499"	"27499"	"27472"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"7.9"	""	"10.9"	""	"10.0"	""	"12.1"	"15.5"	""	"560"	"1"	"34.000"	"27.000"	"21.1425823746321"	"13"	"0.001587"	"0.02172"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQSILELGSLLAK"	"[K].eQSILELGSLLAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"3"	"3"	"0.6304"	"0.0000"	"1"	"1"	"1"	"620.37994"	"1859.12528"	"1859.12539"	"-0.06"	"-0.00004"	"16/134"	"16"	"134"	"1215433.21533203"	"HCD"	"MS2"	"3.762589"	"33.1"	"100.000"	"81.0545"	"27475"	"27475"	"27456"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.8"	"2.3"	"41.6"	""	"42.4"	""	"59.5"	""	"64.9"	"65.0"	""	"566"	"46"	"34.000"	"27.000"	"0.000720752961481566"	""	"0"	"8.962E-06"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIKDAATGAVK"	"[K].tPIkDAATGAVk.[E]"	"N-Term(TMT6plex); K4(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.39008"	"1859.15567"	"1859.15691"	"-0.66"	"-0.00041"	"7/118"	"7"	"118"	"1301582.51678467"	"HCD"	"MS2"	"11.03838"	"108.4"	"100.000"	"34.4691"	"8551"	"8551"	"8522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.2"	"2.9"	"172.7"	""	"183.5"	""	"158.1"	""	"155.8"	"163.0"	""	"357"	"7"	"32.000"	"25.000"	"3.96860815481275"	"13"	"0.001355"	"0.01907"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKLPGQPPASMGR"	"[R].fkLPGQPPASmGR.[G]"	"N-Term(TMT6plex); K2(TMT6plex); M11(Oxidation)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.69037"	"1860.05655"	"1860.05659"	"-0.02"	"-0.00001"	"10/118"	"10"	"118"	"14862470.6306152"	"HCD"	"MS2"	"19.36041"	"507.5"	"100.000"	"36.5076"	"9344"	"9344"	"9322"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"694.7"	""	"725.7"	""	"843.9"	""	"1056.1"	"1.0"	"744.4"	"727.3"	""	"1037"	"24"	"37.000"	"30.000"	"0.192197954244266"	"14"	"0.0001889"	"0.0006116"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKLPGQPPASMGR"	"[R].fkLPGQPPASmGR.[G]"	"N-Term(TMT6plex); K2(TMT6plex); M11(Oxidation)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.69092"	"1860.05820"	"1860.05659"	"0.86"	"0.00054"	"15/118"	"15"	"118"	"13559732.3024902"	"HCD"	"MS2"	"16.28005"	"471.1"	"100.000"	"36.5923"	"9422"	"9422"	"9401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"654.1"	""	"647.4"	""	"763.1"	""	"932.2"	""	"767.0"	"693.5"	""	"1011"	"17"	"37.000"	"30.000"	"0.990195982457278"	"14"	"0.000523"	"0.003144"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWKK"	"[K].dLAEDAPWkk.[I]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.69855"	"1860.08109"	"1860.08341"	"-1.25"	"-0.00077"	"13/82"	"13"	"82"	"8840615.93652344"	"HCD"	"MS2"	"13.56482"	"317.8"	"52.184"	"41.8272"	"11522"	"11522"	"11505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"556.9"	""	"445.9"	""	"448.5"	""	"464.5"	""	"519.1"	"575.2"	""	"877"	"5"	"36.000"	"29.000"	"15.0303674400619"	"13"	"0.0001859"	"0.0003376"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYGHPDTLNK"	"[R].kYGHPDTLNk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"1"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"620.70209"	"1860.09171"	"1860.09464"	"-1.58"	"-0.00098"	"8/92"	"8"	"92"	"3931544.36340332"	"HCD"	"MS2"	"7.479696"	"238.8"	"100.000"	"27.5025"	"5712"	"5712"	"5692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.5"	""	"205.4"	""	"198.2"	""	"555.1"	""	"499.4"	"585.2"	""	"812"	"40"	"36.000"	"29.000"	"0.00394027046701669"	"22"	"0"	"2.121E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYGHPDTLNK"	"[R].kYGHPDTLNk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"1"	"4"	"4"	"0.9474"	"0.0000"	"1"	"1"	"1"	"465.77856"	"1860.09243"	"1860.09464"	"-1.19"	"-0.00055"	"6/92"	"6"	"92"	"15909841.6499023"	"HCD"	"MS2"	"7.129714"	"614.9"	"100.000"	"27.4635"	"5696"	"5696"	"5676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"574.2"	""	"525.0"	""	"506.2"	""	"1452.8"	"8.3"	"1275.2"	"1510.8"	""	"810"	"19"	"36.000"	"29.000"	"0.469304829242826"	"15"	"0.0001889"	"0.0004004"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYGHPDTLNK"	"[R].kYGHPDTLNk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"1"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"620.70245"	"1860.09281"	"1860.09464"	"-0.99"	"-0.00061"	"9/92"	"9"	"92"	"2458699.0446167"	"HCD"	"MS2"	"3.292857"	"155.3"	"100.000"	"27.5796"	"5779"	"5779"	"5762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.4"	""	"143.2"	""	"127.1"	""	"358.5"	"1.7"	"319.0"	"381.3"	""	"806"	"47"	"36.000"	"29.000"	"0.000887779364610543"	"20"	"0"	"3.09E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYGHPDTLNK"	"[R].kYGHPDTLNk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"465.77872"	"1860.09304"	"1860.09464"	"-0.86"	"-0.00040"	"6/92"	"6"	"92"	"16536827.5717773"	"HCD"	"MS2"	"9.315905"	"618.5"	"100.000"	"27.5129"	"5751"	"5751"	"5730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"621.8"	""	"562.5"	""	"469.9"	""	"1458.9"	"9.7"	"1263.0"	"1499.8"	""	"806"	"18"	"36.000"	"29.000"	"0.652086255170156"	"14"	"0"	"0.0001575"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQPGNPSFTLSLK"	"[R].iQPGNPSFTLSLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"930.55353"	"1860.09978"	"1860.09951"	"0.15"	"0.00014"	"17/126"	"17"	"126"	"915733.995849609"	"HCD"	"MS2"	"0"	"72.1"	"100.000"	"59.6504"	"18757"	"18757"	"18729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.3"	""	"102.4"	""	"88.6"	""	"130.4"	""	"132.1"	"136.1"	""	"784"	"38"	"35.000"	"28.000"	"0.00608535707903567"	"16"	"0.0001308"	"0.0002633"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQPGNPSFTLSLK"	"[R].iQPGNPSFTLSLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"930.55377"	"1860.10027"	"1860.09951"	"0.41"	"0.00038"	"13/126"	"13"	"126"	"761879.956176758"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"59.7860"	"18866"	"18866"	"18837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.1"	""	"65.6"	""	"80.2"	""	"103.4"	""	"115.0"	"110.4"	""	"782"	"34"	"35.000"	"28.000"	"0.0145270274576995"	"15"	"0"	"0.0001755"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPMLETLENLSSR"	"[K].iEPMLETLENLSSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"621.00226"	"1860.99222"	"1860.99383"	"-0.86"	"-0.00054"	"13/134"	"13"	"134"	"1053695.26965332"	"HCD"	"MS2"	"30.15073"	"24.1"	"100.000"	"82.5665"	"28092"	"28092"	"28064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.3"	""	"27.2"	""	"29.9"	""	"42.7"	""	"45.9"	"54.3"	""	"1214"	"19"	"37.000"	"30.000"	"0.769464682575712"	"17"	"0"	"3.994E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPMLETLENLSSR"	"[K].iEPMLETLENLSSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"931.00037"	"1860.99346"	"1860.99383"	"-0.20"	"-0.00019"	"7/134"	"7"	"134"	"116280.47467041"	"HCD"	"MS2"	"23.03867"	"8.3"	"100.000"	"82.6057"	"28108"	"28108"	"28080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"6.8"	""	"14.4"	""	"11.1"	""	"17.3"	"17.7"	""	"1225"	"20"	"37.000"	"30.000"	"0.552212321783649"	"22"	"0.0008453"	"0.008124"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPMLETLENLSSR"	"[K].iEPMLETLENLSSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"621.00293"	"1860.99424"	"1860.99383"	"0.22"	"0.00014"	"12/134"	"12"	"134"	"1002204.83135986"	"HCD"	"MS2"	"38.68601"	"24.8"	"100.000"	"82.6169"	"28163"	"28163"	"28141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.4"	""	"28.8"	""	"29.8"	""	"43.8"	""	"51.4"	"52.6"	""	"1227"	"15"	"37.000"	"30.000"	"1.7410633239489"	"18"	"0"	"4.588E-05"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDTAFDLDAFK"	"[R].fLDTAFDLDAFk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"931.00977"	"1861.01225"	"1861.01477"	"-1.35"	"-0.00126"	"6/100"	"6"	"100"	"198898.903686523"	"HCD"	"MS2"	"27.13918"	"20.3"	"100.000"	"86.5896"	"29723"	"29723"	"29700"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.4"	""	"18.3"	""	"25.7"	""	"34.0"	""	"45.2"	"42.1"	""	"1274"	"27"	"38.000"	"31.000"	"0.120265048937434"	"19"	"0.0002723"	"0.001362"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDTAFDLDAFK"	"[R].fLDTAFDLDAFk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.00958"	"1861.01419"	"1861.01477"	"-0.31"	"-0.00019"	"11/100"	"11"	"100"	"974594.426147461"	"HCD"	"MS2"	"20.92918"	"34.8"	"100.000"	"86.5873"	"29722"	"29722"	"29700"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.4"	""	"34.9"	""	"42.3"	""	"52.0"	""	"93.5"	"70.5"	""	"1234"	"28"	"37.000"	"30.000"	"0.1028691530144"	"14"	"0.0001889"	"0.0006629"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDTAFDLDAFK"	"[R].fLDTAFDLDAFk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.00964"	"1861.01438"	"1861.01477"	"-0.21"	"-0.00013"	"10/100"	"10"	"100"	"706868.219970703"	"HCD"	"MS2"	"23.60223"	"25.0"	"100.000"	"86.6321"	"29792"	"29792"	"29773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.8"	""	"28.3"	""	"28.1"	""	"44.4"	""	"50.0"	"56.0"	""	"1234"	"26"	"37.000"	"30.000"	"0.145306540816384"	"14"	"0.0001308"	"0.0002994"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDTAFDLDAFK"	"[R].fLDTAFDLDAFk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"931.01099"	"1861.01470"	"1861.01477"	"-0.04"	"-0.00004"	"9/100"	"9"	"100"	"138103.729980469"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"86.6389"	"29795"	"29795"	"29773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.8"	""	"15.0"	""	"20.3"	""	"24.5"	""	"28.9"	"26.7"	""	"1235"	"23"	"37.000"	"30.000"	"0.305940492821958"	"16"	"0.0002723"	"0.001394"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRPQHQVLFYK"	"[K].sRPQHQVLFYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.03278"	"1861.08377"	"1861.08486"	"-0.58"	"-0.00036"	"8/98"	"8"	"98"	"1387601.515625"	"HCD"	"MS2"	"0"	"76.6"	"100.000"	"30.2731"	"6803"	"6803"	"6778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.0"	""	"72.3"	""	"72.6"	""	"166.9"	""	"185.0"	"163.2"	""	"862"	"37"	"36.000"	"29.000"	"0.00826946227228894"	"15"	"0"	"2.365E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRPQHQVLFYK"	"[K].sRPQHQVLFYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"5"	"621.03308"	"1861.08469"	"1861.08486"	"-0.09"	"-0.00006"	"4/98"	"4"	"98"	"1317016.99804688"	"HCD"	"MS2"	"55.31873"	"77.8"	"100.000"	"30.3260"	"6866"	"6866"	"6838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.9"	""	"82.5"	""	"74.0"	""	"173.3"	""	"184.7"	"159.2"	""	"847"	"8"	"36.000"	"29.000"	"6.10735851370782"	"13"	"0.0001889"	"0.0006248"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSIEQLTTLAEK"	"[R].gLSIEQLTTLAEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.9710"	"0.0000"	"1"	"1"	"1"	"931.05420"	"1861.10112"	"1861.10465"	"-1.90"	"-0.00176"	"17/128"	"17"	"128"	"245760.261169434"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"70.8308"	"23366"	"23366"	"23338"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.6"	""	"20.9"	""	"18.8"	""	"37.3"	""	"37.2"	"45.2"	""	"759"	"69"	"35.000"	"28.000"	"4.33722328052718E-06"	"19"	"0"	"3.949E-06"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSIEQLTTLAEK"	"[R].gLSIEQLTTLAEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"931.05548"	"1861.10369"	"1861.10465"	"-0.52"	"-0.00048"	"14/128"	"14"	"128"	"257676.938354492"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"70.9475"	"23362"	"23362"	"23331"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.6"	""	"18.7"	""	"20.4"	""	"34.3"	""	"47.4"	"36.9"	""	"732"	"57"	"35.000"	"28.000"	"7.20246382032704E-05"	"21"	"0"	"2.478E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTAAFLSPLELK"	"[K].vNTAAFLSPLELk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"931.06342"	"1861.11955"	"1861.11991"	"-0.19"	"-0.00018"	"8/134"	"8"	"134"	"120860.135620117"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"73.9158"	"24574"	"24574"	"24545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.3"	""	"7.9"	""	"9.9"	""	"17.1"	""	"17.0"	"20.3"	""	"623"	"17"	"34.000"	"27.000"	"0.559059524758332"	"14"	"0.0004166"	"0.002204"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVVVNDLGGDFK"	"[R].gALVVVNDLGGDFk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.9014"	"0.0000"	"1"	"1"	"1"	"931.54193"	"1862.07659"	"1862.07877"	"-1.17"	"-0.00109"	"10/126"	"10"	"126"	"863695.657165527"	"HCD"	"MS2"	"18.49987"	"67.9"	"100.000"	"66.4624"	"21539"	"21539"	"21513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.0"	""	"96.5"	""	"93.1"	""	"121.4"	"0.7"	"118.6"	"124.9"	""	"890"	"71"	"36.000"	"29.000"	"3.89367779976209E-06"	"24"	"0"	"2.4E-06"	"1.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVVVNDLGGDFK"	"[R].gALVVVNDLGGDFk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.9873"	"0.0000"	"1"	"1"	"1"	"931.54254"	"1862.07781"	"1862.07877"	"-0.52"	"-0.00048"	"19/126"	"19"	"126"	"908936.587463379"	"HCD"	"MS2"	"26.13144"	"69.5"	"100.000"	"66.4247"	"21576"	"21576"	"21555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.3"	""	"107.9"	""	"86.9"	""	"110.6"	""	"118.8"	"132.1"	""	"887"	"79"	"36.000"	"29.000"	"6.15026210104682E-07"	"18"	"0"	"2.044E-06"	"1.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVVVNDLGGDFK"	"[R].gALVVVNDLGGDFk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"621.36432"	"1862.07840"	"1862.07877"	"-0.20"	"-0.00012"	"16/126"	"16"	"126"	"7269641.24658203"	"HCD"	"MS2"	"56.01484"	"168.8"	"92.224"	"66.4524"	"21588"	"21588"	"21571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.9"	""	"217.8"	""	"221.3"	""	"293.0"	"2.7"	"306.6"	"328.4"	""	"893"	"34"	"36.000"	"29.000"	"0.0162488063630798"	"16"	"0"	"2.968E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALVVVNDLGGDFK"	"[R].gALVVVNDLGGDFk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"3"	"3"	"0.3125"	"0.0000"	"1"	"1"	"1"	"621.36432"	"1862.07840"	"1862.07877"	"-0.20"	"-0.00012"	"14/126"	"14"	"126"	"6558377.34484863"	"HCD"	"MS2"	"33.728"	"163.2"	"91.645"	"66.5636"	"21580"	"21580"	"21561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.1"	""	"207.4"	""	"209.1"	""	"303.6"	""	"309.4"	"314.2"	""	"893"	"17"	"36.000"	"29.000"	"0.999588988370763"	"24"	"0"	"0.0001651"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.5091"	"0.0000"	"1"	"1"	"1"	"621.36572"	"1862.08261"	"1862.08616"	"-1.91"	"-0.00118"	"9/96"	"9"	"96"	"1579112.55670166"	"HCD"	"MS2"	"24.39788"	"37.3"	"100.000"	"82.7303"	"28209"	"28209"	"28189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.3"	""	"48.2"	""	"47.8"	""	"55.4"	""	"70.6"	"78.1"	""	"875"	"55"	"36.000"	"29.000"	"0.000153101010574906"	""	"0"	"2.4E-05"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"931.54541"	"1862.08354"	"1862.08616"	"-1.41"	"-0.00131"	"9/96"	"9"	"96"	"266540.749145508"	"HCD"	"MS2"	"39.47415"	"20.2"	"100.000"	"82.7114"	"28202"	"28202"	"28173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.2"	""	"26.8"	""	"29.0"	""	"28.8"	"1.2"	"38.4"	"36.8"	""	"903"	"50"	"36.000"	"29.000"	"0.000443259196273523"	""	"0"	"0.0001058"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.5106"	"0.0000"	"1"	"1"	"1"	"931.54553"	"1862.08379"	"1862.08616"	"-1.28"	"-0.00119"	"13/96"	"13"	"96"	"272481.340026855"	"HCD"	"MS2"	"28.28115"	"22.9"	"100.000"	"82.6889"	"28142"	"28142"	"28112"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.2"	""	"34.8"	""	"33.5"	""	"27.3"	""	"35.4"	"52.8"	""	"900"	"47"	"36.000"	"29.000"	"0.000855485225965484"	""	"0"	"0.0001576"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.4407"	"0.0000"	"1"	"1"	"1"	"931.54578"	"1862.08428"	"1862.08616"	"-1.01"	"-0.00094"	"15/96"	"15"	"96"	"451187.691650391"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"83.2836"	"28384"	"28384"	"28366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.5"	""	"40.0"	""	"51.7"	""	"46.7"	"0.6"	"65.2"	"79.2"	""	"908"	"59"	"36.000"	"29.000"	"5.10570658180985E-05"	""	"0"	"1.332E-05"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"621.36633"	"1862.08445"	"1862.08616"	"-0.92"	"-0.00057"	"9/96"	"9"	"96"	"3689717.10217285"	"HCD"	"MS2"	"2.633421"	"85.9"	"100.000"	"83.0391"	"28335"	"28335"	"28317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.9"	""	"111.0"	""	"118.7"	""	"113.0"	"0.6"	"157.4"	"177.4"	""	"899"	"54"	"36.000"	"29.000"	"0.000193521711416024"	""	"0"	"1.911E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"621.36639"	"1862.08463"	"1862.08616"	"-0.82"	"-0.00051"	"9/96"	"9"	"96"	"1492845.27832031"	"HCD"	"MS2"	"40.23355"	"34.6"	"100.000"	"82.6775"	"28137"	"28137"	"28112"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.1"	""	"42.4"	""	"46.6"	""	"56.8"	""	"66.5"	"69.6"	""	"894"	"39"	"36.000"	"29.000"	"0.00548665336327808"	""	"0"	"4.287E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"931.54596"	"1862.08464"	"1862.08616"	"-0.82"	"-0.00076"	"8/96"	"8"	"96"	"1039970.40612793"	"HCD"	"MS2"	"100"	"75.3"	"100.000"	"83.0022"	"28320"	"28320"	"28301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.6"	""	"88.9"	""	"109.7"	""	"97.2"	""	"146.1"	"162.9"	""	"893"	"36"	"36.000"	"29.000"	"0.0101349465636613"	""	"0"	"4.977E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.6176"	"0.0000"	"1"	"1"	"1"	"621.36664"	"1862.08536"	"1862.08616"	"-0.43"	"-0.00027"	"9/96"	"9"	"96"	"1425099.85510254"	"HCD"	"MS2"	"6.959341"	"40.3"	"100.000"	"83.3476"	"28462"	"28462"	"28445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.1"	""	"50.7"	""	"62.3"	""	"57.5"	""	"74.9"	"81.1"	""	"895"	"34"	"36.000"	"29.000"	"0.0198972492192426"	"27"	"0"	"7.729E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.4561"	"0.0000"	"1"	"1"	"1"	"621.36664"	"1862.08536"	"1862.08616"	"-0.43"	"-0.00027"	"9/96"	"9"	"96"	"2021672.26446533"	"HCD"	"MS2"	"4.521617"	"53.0"	"100.000"	"83.2792"	"28383"	"28383"	"28366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.2"	""	"62.3"	""	"77.9"	""	"76.4"	"0.1"	"102.3"	"112.8"	""	"895"	"57"	"36.000"	"29.000"	"8.90826319196766E-05"	""	"0"	"1.364E-05"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"931.54639"	"1862.08550"	"1862.08616"	"-0.36"	"-0.00033"	"8/96"	"8"	"96"	"411010.677185059"	"HCD"	"MS2"	"0"	"30.5"	"100.000"	"83.3152"	"28448"	"28448"	"28429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.5"	""	"41.2"	""	"46.5"	""	"44.0"	"0.7"	"52.9"	"60.3"	""	"893"	"44"	"36.000"	"29.000"	"0.00180227667960036"	""	"0"	"0.0001723"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"621.36676"	"1862.08573"	"1862.08616"	"-0.23"	"-0.00015"	"8/96"	"8"	"96"	"3870370.87084961"	"HCD"	"MS2"	"4.094132"	"88.9"	"100.000"	"82.9707"	"28257"	"28257"	"28240"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.6"	""	"112.8"	""	"117.2"	""	"124.6"	"0.1"	"158.2"	"194.1"	""	"893"	"44"	"36.000"	"29.000"	"0.00168585983248198"	""	"0"	"2.794E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVMQILk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.5063"	"0.0000"	"1"	"1"	"1"	"931.54700"	"1862.08672"	"1862.08616"	"0.30"	"0.00028"	"11/96"	"11"	"96"	"990660.208557129"	"HCD"	"MS2"	"0"	"70.6"	"100.000"	"82.9775"	"28259"	"28259"	"28240"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.3"	""	"105.8"	""	"119.2"	""	"81.8"	"0.7"	"123.1"	"133.4"	""	"865"	"79"	"36.000"	"29.000"	"5.97016194440749E-07"	""	"0"	"8.67E-07"	"1.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVFNHFISDGVK"	"[K].aAVFNHFISDGVk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"621.68909"	"1863.05271"	"1863.05289"	"-0.10"	"-0.00006"	"13/114"	"13"	"114"	"31611945.0754395"	"HCD"	"MS2"	"14.74487"	"367.2"	"32.935"	"48.7487"	"14336"	"14336"	"14319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"572.1"	""	"611.3"	""	"459.5"	""	"620.1"	""	"620.4"	"594.9"	""	"1037"	"25"	"37.000"	"30.000"	"0.18312547353713"	"20"	"0"	"0.0001539"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVFNHFISDGVK"	"[K].aAVFNHFISDGVk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"621.68921"	"1863.05307"	"1863.05289"	"0.10"	"0.00006"	"13/114"	"13"	"114"	"32010998.7387695"	"HCD"	"MS2"	"19.43135"	"410.9"	"41.158"	"49.0630"	"14512"	"14512"	"14495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"658.6"	""	"671.3"	""	"515.4"	""	"706.9"	"2.9"	"661.4"	"668.8"	""	"1054"	"43"	"37.000"	"30.000"	"0.00283668175386084"	"25"	"0"	"2.43E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INLPIQTFSALNFR"	"[R].iNLPIQTFSALNFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"621.69409"	"1863.06772"	"1863.06898"	"-0.68"	"-0.00042"	"14/132"	"14"	"132"	"577614.427124023"	"HCD"	"MS2"	"18.11504"	"15.5"	"100.000"	"81.2572"	"27609"	"27609"	"27582"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.0"	""	"17.6"	""	"21.9"	""	"26.5"	""	"28.5"	"33.8"	""	"958"	"21"	"36.000"	"29.000"	"0.424947729766183"	"21"	"0"	"0.0001103"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INLPIQTFSALNFR"	"[R].iNLPIQTFSALNFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.03766"	"1863.06804"	"1863.06898"	"-0.51"	"-0.00047"	"6/132"	"6"	"132"	"124762.654296875"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"81.1304"	"27557"	"27557"	"27534"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"15.4"	""	"14.4"	""	"5.6"	""	"10.8"	"10.2"	""	"958"	"10"	"36.000"	"29.000"	"4.71341319659583"	"13"	"0.00103"	"0.01264"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INLPIQTFSALNFR"	"[R].iNLPIQTFSALNFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.69440"	"1863.06864"	"1863.06898"	"-0.19"	"-0.00012"	"9/132"	"9"	"132"	"1105063.74475098"	"HCD"	"MS2"	"31.57546"	"24.9"	"100.000"	"81.1861"	"27529"	"27529"	"27504"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.2"	""	"31.5"	""	"47.6"	""	"39.1"	""	"43.4"	"39.6"	""	"960"	"11"	"36.000"	"29.000"	"3.53379406797473"	"13"	"0"	"0.00018"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDTIFVPNTGK"	"[K].lTVDTIFVPNTGk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.05164"	"1863.09599"	"1863.09917"	"-1.70"	"-0.00159"	"14/120"	"14"	"120"	"326682.97869873"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"63.6898"	"20407"	"20407"	"20377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.4"	""	"40.3"	""	"41.3"	""	"35.2"	""	"60.3"	"58.8"	""	"702"	"31"	"35.000"	"28.000"	"0.0275617707748135"	"14"	"0"	"9.124E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDTIFVPNTGK"	"[K].lTVDTIFVPNTGk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"621.70410"	"1863.09775"	"1863.09917"	"-0.76"	"-0.00047"	"14/120"	"14"	"120"	"4347917.96350098"	"HCD"	"MS2"	"78.09344"	"116.4"	"100.000"	"63.6166"	"20430"	"20430"	"20403"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.2"	""	"173.6"	""	"164.2"	""	"172.4"	""	"229.4"	"240.0"	""	"687"	"43"	"35.000"	"28.000"	"0.0017779794677502"	"16"	"0"	"5.864E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLTTQGVDMISK"	"[R].vLLTTQGVDMISk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"932.05304"	"1863.09880"	"1863.10254"	"-2.01"	"-0.00187"	"19/126"	"19"	"126"	"897728.079650879"	"HCD"	"MS2"	"20.12943"	"68.1"	"100.000"	"61.7820"	"19681"	"19681"	"19651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.2"	""	"93.3"	""	"103.0"	""	"74.6"	""	"144.0"	"137.8"	""	"685"	"60"	"35.000"	"28.000"	"3.1308378520356E-05"	"19"	"0"	"1.262E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDTIFVPNTGK"	"[K].lTVDTIFVPNTGk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.70459"	"1863.09922"	"1863.09917"	"0.02"	"0.00002"	"14/120"	"14"	"120"	"4136681.96453857"	"HCD"	"MS2"	"52.65414"	"112.3"	"100.000"	"63.6045"	"20372"	"20372"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.8"	""	"159.1"	""	"159.5"	""	"176.6"	""	"215.0"	"240.2"	""	"684"	"43"	"35.000"	"28.000"	"0.00161445560112148"	"15"	"0"	"5.187E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLTTQGVDMISK"	"[R].vLLTTQGVDMISk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"932.05432"	"1863.10137"	"1863.10254"	"-0.63"	"-0.00059"	"19/126"	"19"	"126"	"899398.779602051"	"HCD"	"MS2"	"14.45765"	"70.5"	"100.000"	"61.6415"	"19570"	"19570"	"19545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.1"	""	"93.3"	""	"105.0"	""	"86.5"	""	"147.9"	"142.4"	""	"672"	"57"	"35.000"	"28.000"	"7.16703090817249E-05"	"21"	"0"	"1.702E-06"	"1.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLTTQGVDMISK"	"[R].vLLTTQGVDMISk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"621.70551"	"1863.10196"	"1863.10254"	"-0.31"	"-0.00019"	"10/126"	"10"	"126"	"6516395.33795166"	"HCD"	"MS2"	"19.36444"	"170.6"	"100.000"	"61.6645"	"19579"	"19579"	"19561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.2"	""	"230.1"	""	"245.8"	""	"219.5"	"0.2"	"348.0"	"350.7"	""	"665"	"70"	"35.000"	"28.000"	"3.0534558833079E-06"	"25"	"0"	"1.877E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLTTQGVDMISK"	"[R].vLLTTQGVDMISk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"621.70575"	"1863.10270"	"1863.10254"	"0.08"	"0.00005"	"10/126"	"10"	"126"	"6046975.4262085"	"HCD"	"MS2"	"14.62932"	"169.0"	"100.000"	"61.7935"	"19685"	"19685"	"19667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.6"	""	"232.5"	""	"227.5"	""	"232.7"	""	"343.1"	"343.3"	""	"644"	"56"	"35.000"	"28.000"	"8.68672097247264E-05"	"21"	"0"	"3.203E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLVPPGSPVVNALFR"	"[K].aPLVPPGSPVVNALFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.05505"	"1863.10283"	"1863.10537"	"-1.36"	"-0.00127"	"10/128"	"10"	"128"	"467751.907165527"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"73.1870"	"24328"	"24328"	"24303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.9"	""	"15.2"	""	"18.6"	""	"28.4"	""	"27.6"	"29.8"	""	"644"	"27"	"35.000"	"28.000"	"0.0638051702309241"	"14"	"0.0001889"	"0.0007529"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLVPPGSPVVNALFR"	"[K].aPLVPPGSPVVNALFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.05524"	"1863.10320"	"1863.10537"	"-1.17"	"-0.00109"	"8/128"	"8"	"128"	"332275.769592285"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"73.2307"	"24294"	"24294"	"24273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.0"	""	"14.6"	""	"12.8"	""	"20.2"	""	"13.0"	"21.7"	""	"646"	"29"	"35.000"	"28.000"	"0.0363247406591317"	"14"	"0.0003839"	"0.001977"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLVPPGSPVVNALFR"	"[K].aPLVPPGSPVVNALFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.05597"	"1863.10466"	"1863.10537"	"-0.38"	"-0.00035"	"12/128"	"12"	"128"	"507843.48614502"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"72.8689"	"24198"	"24198"	"24175"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.6"	""	"18.5"	""	"19.0"	""	"25.6"	""	"19.3"	"27.0"	""	"629"	"41"	"34.000"	"27.000"	"0.00224709094550749"	"15"	"0.0001308"	"0.000274"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLVPPGSPVVNALFR"	"[K].aPLVPPGSPVVNALFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.05621"	"1863.10515"	"1863.10537"	"-0.12"	"-0.00011"	"12/128"	"12"	"128"	"509586.023254395"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"72.9307"	"24172"	"24172"	"24145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.2"	""	"18.4"	""	"18.5"	""	"21.4"	"1.8"	"24.2"	"25.3"	""	"619"	"38"	"34.000"	"27.000"	"0.00540331956328896"	"15"	"0"	"0.0001705"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDVYVNDAFGTAHR"	"[K].lGDVYVNDAFGTAHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"621.98920"	"1863.95304"	"1863.95508"	"-1.09"	"-0.00068"	"18/146"	"18"	"146"	"5269085.89227295"	"HCD"	"MS2"	"30.25054"	"174.6"	"100.000"	"45.2345"	"12951"	"12951"	"12923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"239.7"	""	"261.3"	""	"247.6"	""	"269.0"	"1.7"	"319.6"	"314.8"	""	"1119"	"25"	"37.000"	"30.000"	"0.186123020067995"	"17"	"0"	"6.958E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLMPGLTFSNELISR"	"[R].gLMPGLTFSNELISR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLN6"	"Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus OX=10116 GN=Rrm2 PE=2 SV=1"	"Q4KLN6"	"Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus OX=10116 GN=Rrm2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.51294"	"1864.01860"	"1864.01999"	"-0.74"	"-0.00069"	"4/136"	"4"	"136"	"210495.887451172"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"71.4483"	"23618"	"23618"	"23594"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.4"	""	"16.7"	""	"17.5"	""	"12.8"	"1.4"	"16.4"	"22.1"	""	"1094"	"10"	"37.000"	"30.000"	"5.62324915075181"	"13"	"0.001217"	"0.01733"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYYFIQQDTK"	"[K].sLYYFIQQDTk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.51575"	"1864.02422"	"1864.02567"	"-0.78"	"-0.00073"	"9/106"	"9"	"106"	"1371671.05981445"	"HCD"	"MS2"	"0"	"120.4"	"100.000"	"62.2908"	"19835"	"19835"	"19817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.8"	""	"143.0"	""	"167.3"	""	"205.9"	"1.8"	"207.6"	"240.7"	""	"1093"	"58"	"37.000"	"30.000"	"7.73731300746545E-05"	"16"	"0"	"2.295E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYYFIQQDTK"	"[K].sLYYFIQQDTk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"622.01306"	"1864.02463"	"1864.02567"	"-0.56"	"-0.00035"	"12/106"	"12"	"106"	"17218315.5296631"	"HCD"	"MS2"	"6.120223"	"146.0"	"35.974"	"62.3769"	"19924"	"19924"	"19907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.3"	""	"180.0"	""	"192.8"	""	"239.9"	"1.2"	"269.3"	"296.5"	""	"1093"	"47"	"37.000"	"30.000"	"0.00112354421070533"	"19"	"0.0001889"	"0.0007852"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYYFIQQDTK"	"[K].sLYYFIQQDTk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"622.01318"	"1864.02500"	"1864.02567"	"-0.36"	"-0.00022"	"12/106"	"12"	"106"	"9127929.33978271"	"HCD"	"MS2"	"26.36362"	"218.8"	"100.000"	"62.0702"	"19798"	"19798"	"19779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"319.4"	""	"290.6"	""	"295.7"	""	"372.3"	"1.0"	"394.6"	"399.1"	""	"1082"	"50"	"37.000"	"30.000"	"0.000493397864091547"	"18"	"0.0001889"	"0.001087"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYYFIQQDTK"	"[K].sLYYFIQQDTk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"622.01324"	"1864.02518"	"1864.02567"	"-0.26"	"-0.00016"	"11/106"	"11"	"106"	"8993608.4954834"	"HCD"	"MS2"	"22.94411"	"238.3"	"100.000"	"61.9343"	"19690"	"19690"	"19673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"358.7"	""	"292.9"	""	"329.3"	""	"406.8"	""	"416.5"	"457.2"	""	"1083"	"45"	"37.000"	"30.000"	"0.0017242429580147"	"17"	"0.0001308"	"0.0003014"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYYFIQQDTK"	"[K].sLYYFIQQDTk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"932.51636"	"1864.02544"	"1864.02567"	"-0.13"	"-0.00012"	"9/106"	"9"	"106"	"2801938.00213623"	"HCD"	"MS2"	"0"	"208.7"	"100.000"	"62.1120"	"19815"	"19815"	"19795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"329.8"	""	"267.2"	""	"274.5"	""	"352.0"	"2.6"	"362.2"	"387.8"	""	"1083"	"57"	"37.000"	"30.000"	"0.000116841859755617"	"20"	"0"	"2.892E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYYFIQQDTK"	"[K].sLYYFIQQDTk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.51648"	"1864.02568"	"1864.02567"	"0.01"	"0.00001"	"10/106"	"10"	"106"	"2963343.66375732"	"HCD"	"MS2"	"0"	"232.5"	"100.000"	"61.9873"	"19711"	"19711"	"19689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"369.4"	""	"283.7"	""	"306.0"	""	"384.2"	"3.2"	"402.5"	"453.3"	""	"1090"	"69"	"37.000"	"30.000"	"6.15738773496675E-06"	"17"	"0"	"1.639E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYYFIQQDTK"	"[K].sLYYFIQQDTk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.51660"	"1864.02593"	"1864.02567"	"0.14"	"0.00013"	"7/106"	"7"	"106"	"1232908.01470947"	"HCD"	"MS2"	"0"	"102.8"	"100.000"	"62.4257"	"19943"	"19943"	"19923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.2"	""	"126.9"	""	"138.2"	""	"168.8"	""	"189.1"	"207.6"	""	"1082"	"53"	"37.000"	"30.000"	"0.000285888881210372"	"16"	"0"	"3.408E-05"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYYFIQQDTK"	"[K].sLYYFIQQDTk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"622.01361"	"1864.02628"	"1864.02567"	"0.33"	"0.00020"	"12/106"	"12"	"106"	"17770753.1893311"	"HCD"	"MS2"	"4.980027"	"152.8"	"33.021"	"62.2472"	"19818"	"19818"	"19801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.3"	""	"189.9"	""	"203.9"	""	"252.9"	""	"280.5"	"289.7"	""	"1080"	"44"	"37.000"	"30.000"	"0.00235718549409689"	"17"	"0.0001889"	"0.0008666"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVTGLDYWIVK"	"[K].dPVTGLDYWIVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"0"	"2"	"2"	"0.8028"	"0.0000"	"1"	"1"	"1"	"932.53363"	"1864.05998"	"1864.06206"	"-1.11"	"-0.00104"	"10/100"	"10"	"100"	"799251.073364258"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"75.6366"	"25328"	"25328"	"25311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.6"	""	"74.9"	""	"84.0"	""	"95.7"	""	"102.4"	"119.1"	""	"925"	"71"	"36.000"	"29.000"	"3.46826071816261E-06"	""	"0"	"2.788E-06"	"1.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVTGLDYWIVK"	"[K].dPVTGLDYWIVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"0"	"2"	"2"	"0.7910"	"0.0000"	"1"	"1"	"1"	"932.53363"	"1864.05998"	"1864.06206"	"-1.11"	"-0.00104"	"10/100"	"10"	"100"	"662690.64654541"	"HCD"	"MS2"	"0"	"49.0"	"100.000"	"75.3325"	"25152"	"25152"	"25121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.8"	""	"59.9"	""	"79.4"	""	"76.1"	""	"84.3"	"91.1"	""	"925"	"67"	"36.000"	"29.000"	"8.89429924620948E-06"	""	"0"	"4.319E-06"	"1.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVTGLDYWIVK"	"[K].dPVTGLDYWIVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"622.02490"	"1864.06015"	"1864.06206"	"-1.02"	"-0.00063"	"8/100"	"8"	"100"	"6184915.44171143"	"HCD"	"MS2"	"18.29464"	"127.7"	"100.000"	"75.3689"	"25218"	"25218"	"25199"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.0"	""	"169.2"	""	"184.7"	""	"206.3"	""	"240.0"	"251.6"	""	"924"	"43"	"36.000"	"29.000"	"0.00259801692237941"	"27"	"0"	"6.074E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVTGLDYWIVK"	"[K].dPVTGLDYWIVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"932.53394"	"1864.06059"	"1864.06206"	"-0.78"	"-0.00073"	"9/100"	"9"	"100"	"1040931.60717773"	"HCD"	"MS2"	"0"	"81.3"	"100.000"	"75.6512"	"25282"	"25282"	"25265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.0"	""	"100.6"	""	"125.3"	""	"132.3"	""	"160.0"	"155.6"	""	"921"	"47"	"36.000"	"29.000"	"0.00093590040353613"	"20"	"0"	"4.671E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVTGLDYWIVK"	"[K].dPVTGLDYWIVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"622.02509"	"1864.06070"	"1864.06206"	"-0.73"	"-0.00045"	"9/100"	"9"	"100"	"2975111.61480713"	"HCD"	"MS2"	"6.257647"	"86.4"	"100.000"	"75.6972"	"25300"	"25300"	"25281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.7"	""	"113.7"	""	"122.2"	""	"152.8"	"5.5"	"164.6"	"163.4"	""	"917"	"31"	"36.000"	"29.000"	"0.0327596565505623"	"23"	"7.476E-05"	"0.0001855"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVTGLDYWIVK"	"[K].dPVTGLDYWIVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"932.53412"	"1864.06096"	"1864.06206"	"-0.59"	"-0.00055"	"10/100"	"10"	"100"	"725694.018249512"	"HCD"	"MS2"	"0"	"53.8"	"100.000"	"75.3182"	"25198"	"25198"	"25167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.3"	""	"76.8"	""	"72.8"	""	"87.8"	""	"99.4"	"94.9"	""	"916"	"65"	"36.000"	"29.000"	"1.42845142951502E-05"	"27"	"0"	"1.093E-05"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVTGLDYWIVK"	"[K].dPVTGLDYWIVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"622.02521"	"1864.06107"	"1864.06206"	"-0.53"	"-0.00033"	"9/100"	"9"	"100"	"2711915.59838867"	"HCD"	"MS2"	"7.381373"	"75.7"	"100.000"	"75.6826"	"25346"	"25346"	"25327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.3"	""	"91.1"	""	"108.8"	""	"117.7"	"1.0"	"151.5"	"156.2"	""	"903"	"34"	"36.000"	"29.000"	"0.020167764185616"	"26"	"0"	"0.0001476"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVTGLDYWIVK"	"[K].dPVTGLDYWIVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"P80067"	"Dipeptidyl peptidase 1 OS=Rattus norvegicus OX=10116 GN=Ctsc PE=1 SV=3"	"0"	"3"	"3"	"0.7209"	"0.0000"	"1"	"1"	"1"	"622.02521"	"1864.06107"	"1864.06206"	"-0.53"	"-0.00033"	"9/100"	"9"	"100"	"5337915.60986328"	"HCD"	"MS2"	"13.07427"	"123.7"	"100.000"	"75.3810"	"25171"	"25171"	"25153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"138.6"	""	"179.1"	""	"175.6"	""	"203.8"	"0.1"	"241.2"	"235.4"	""	"903"	"43"	"36.000"	"29.000"	"0.00229962888282324"	"27"	"0"	"7.196E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IESLNEEIAFLK"	"[R].iESLNEEIAFLk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.54297"	"1864.07866"	"1864.08319"	"-2.43"	"-0.00226"	"6/112"	"6"	"112"	"101134.497070313"	"HCD"	"MS2"	"28.78823"	"8.9"	"100.000"	"74.9792"	"25008"	"25008"	"24977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.4"	""	"12.3"	""	"11.2"	""	"10.8"	""	"17.4"	"21.4"	""	"801"	"9"	"36.000"	"29.000"	"5.39017071799407"	"13"	"0.002981"	"0.05719"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIKDILIQYDR"	"[K].eIkDILIQYDR.[T]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.03638"	"1864.09458"	"1864.09442"	"0.08"	"0.00005"	"7/114"	"7"	"114"	"3280737.40716553"	"HCD"	"MS2"	"71.83787"	"152.5"	"100.000"	"55.4967"	"17118"	"17118"	"17093"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.4"	""	"197.8"	""	"220.6"	""	"258.7"	""	"266.1"	"232.5"	""	"736"	"2"	"35.000"	"28.000"	"23.9247726046257"	"13"	"0.0006037"	"0.004245"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIKDILIQYDR"	"[K].eIkDILIQYDR.[T]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.03741"	"1864.09769"	"1864.09442"	"1.75"	"0.00109"	"7/114"	"7"	"114"	"2729449.94732666"	"HCD"	"MS2"	"46.20511"	"132.7"	"100.000"	"55.3413"	"17001"	"17001"	"16971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.5"	""	"182.4"	""	"193.9"	""	"201.1"	""	"226.2"	"211.8"	""	"701"	"3"	"35.000"	"28.000"	"18.017229987964"	"13"	"0.0002277"	"0.001198"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQGAYLGPLPYK"	"[K].aEQGAYLGPLPYk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"622.35675"	"1865.05570"	"1865.05731"	"-0.86"	"-0.00054"	"8/116"	"8"	"116"	"6784471.00762939"	"HCD"	"MS2"	"12.06402"	"220.4"	"100.000"	"50.8625"	"15240"	"15240"	"15222"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"385.2"	""	"372.0"	""	"289.8"	""	"308.8"	"2.8"	"366.0"	"359.1"	""	"951"	"27"	"36.000"	"29.000"	"0.101193011636478"	"15"	"0"	"2.591E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQGAYLGPLPYK"	"[K].aEQGAYLGPLPYk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"933.03156"	"1865.05583"	"1865.05731"	"-0.79"	"-0.00074"	"19/116"	"19"	"116"	"1092995.26727295"	"HCD"	"MS2"	"0"	"80.0"	"100.000"	"50.6584"	"15157"	"15157"	"15132"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.6"	""	"156.2"	""	"98.2"	""	"112.3"	"0.9"	"110.2"	"109.8"	""	"953"	"60"	"36.000"	"29.000"	"4.65653535785444E-05"	"18"	"0"	"5.013E-06"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQGAYLGPLPYK"	"[K].aEQGAYLGPLPYk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"622.35706"	"1865.05661"	"1865.05731"	"-0.37"	"-0.00023"	"10/116"	"10"	"116"	"8204223.48919678"	"HCD"	"MS2"	"9.775949"	"190.6"	"80.968"	"50.6187"	"15091"	"15091"	"15074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"326.9"	""	"331.9"	""	"245.2"	""	"265.1"	"1.2"	"313.3"	"318.8"	""	"939"	"50"	"36.000"	"29.000"	"0.000450438596496731"	"19"	"0"	"4.501E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQGAYLGPLPYK"	"[K].aEQGAYLGPLPYk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9180"	"0.0000"	"1"	"1"	"1"	"933.03345"	"1865.05962"	"1865.05731"	"1.24"	"0.00116"	"16/116"	"16"	"116"	"1466217.54779053"	"HCD"	"MS2"	"0"	"100.4"	"100.000"	"50.4879"	"15037"	"15037"	"15015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.1"	""	"219.6"	""	"122.3"	""	"127.7"	""	"134.5"	"137.8"	""	"903"	"61"	"36.000"	"29.000"	"3.2037436223547E-05"	"22"	"0"	"8.358E-06"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSPLTLEDFK"	"[R].kSPLTLEDFk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"1"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"622.38208"	"1865.13169"	"1865.13511"	"-1.84"	"-0.00114"	"9/102"	"9"	"102"	"6613457.48101807"	"HCD"	"MS2"	"29.07286"	"300.0"	"100.000"	"47.8043"	"13997"	"13997"	"13970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"414.6"	""	"409.0"	""	"390.3"	""	"528.1"	""	"561.9"	"540.1"	""	"405"	"17"	"33.000"	"26.000"	"0.389426075104307"	"15"	"0"	"0.0001312"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSPLTLEDFK"	"[R].kSPLTLEDFk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"1"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"622.38281"	"1865.13388"	"1865.13511"	"-0.66"	"-0.00041"	"9/102"	"9"	"102"	"5978602.06072998"	"HCD"	"MS2"	"28.52827"	"281.5"	"100.000"	"47.5060"	"13827"	"13827"	"13800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"429.7"	""	"359.3"	""	"376.3"	""	"476.2"	"2.1"	"523.0"	"500.1"	""	"384"	"19"	"32.000"	"25.000"	"0.259597932133301"	"15"	"0"	"0.0001244"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIEGLSLHNILK"	"[R].lGIEGLSLHNILk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.39160"	"1865.16025"	"1865.16244"	"-1.17"	"-0.00073"	"11/108"	"11"	"108"	"2699029.74786377"	"HCD"	"MS2"	"35.18383"	"100.1"	"100.000"	"65.0491"	"20962"	"20962"	"20937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.3"	""	"132.1"	""	"160.1"	""	"166.6"	""	"173.3"	"194.5"	""	"266"	"27"	"31.000"	"24.000"	"0.0238699572368726"	"14"	"0"	"0.0001159"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHSQVVAGMNYK"	"[K].sAHSQVVAGmNYk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.66821"	"1865.99009"	"1865.99439"	"-2.31"	"-0.00143"	"13/118"	"13"	"118"	"1362408.53076172"	"HCD"	"MS2"	"43.04674"	"30.1"	"100.000"	"26.3162"	"5232"	"5232"	"5202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.8"	""	"40.2"	""	"25.2"	""	"61.1"	""	"63.3"	"47.2"	""	"1148"	"38"	"37.000"	"30.000"	"0.00990630950002377"	"15"	"0"	"4.55E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHSQVVAGMNYK"	"[K].sAHSQVVAGmNYk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.66846"	"1865.99082"	"1865.99439"	"-1.91"	"-0.00119"	"13/118"	"13"	"118"	"640269.741027832"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"26.4686"	"5331"	"5331"	"5301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.4"	""	"31.6"	""	"19.9"	""	"41.1"	"1.8"	"51.4"	"33.1"	""	"1151"	"29"	"37.000"	"30.000"	"0.0794411144278961"	"14"	"0"	"0.0001451"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].lHFFmPGFAPLTSR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.66870"	"1865.99155"	"1865.99338"	"-0.98"	"-0.00061"	"9/106"	"9"	"106"	"19486805.6361084"	"HCD"	"MS2"	"3.985831"	"165.9"	"64.843"	"59.1295"	"18598"	"18598"	"18581"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.6"	""	"171.0"	""	"150.6"	""	"321.3"	"14.2"	"341.1"	"411.8"	""	"1162"	"26"	"37.000"	"30.000"	"0.154944488408698"	"14"	"0"	"9.608E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].lHFFmPGFAPLTSR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.66901"	"1865.99247"	"1865.99338"	"-0.49"	"-0.00030"	"11/106"	"11"	"106"	"34913860.3317871"	"HCD"	"MS2"	"0.6996653"	"79.6"	"18.898"	"59.4431"	"18726"	"18726"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.6"	""	"101.0"	""	"98.9"	""	"175.8"	"1.0"	"129.7"	"145.9"	""	"1167"	"26"	"37.000"	"30.000"	"0.148607545238337"	"14"	"0"	"0.0001523"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].lHFFmPGFAPLTSR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.66907"	"1865.99265"	"1865.99338"	"-0.39"	"-0.00024"	"11/106"	"11"	"106"	"12372175.5852051"	"HCD"	"MS2"	"22.33047"	"209.8"	"100.000"	"58.9611"	"18476"	"18476"	"18457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.9"	""	"201.0"	""	"207.7"	""	"373.8"	"16.3"	"448.8"	"544.3"	""	"1167"	"24"	"37.000"	"30.000"	"0.253536715804112"	"14"	"0"	"8.658E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHFFMPGFAPLTSR"	"[R].lHFFmPGFAPLTSR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.66974"	"1865.99466"	"1865.99338"	"0.69"	"0.00043"	"11/106"	"11"	"106"	"39435114.2268066"	"HCD"	"MS2"	"0.7911913"	"87.9"	"21.052"	"59.2706"	"18602"	"18602"	"18585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.0"	""	"114.1"	""	"98.0"	""	"178.4"	"1.1"	"167.1"	"160.4"	""	"1146"	"37"	"37.000"	"30.000"	"0.0103312916551253"	"15"	"0"	"0.0001025"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFGNPFSQLYMDR"	"[R].fFGNPFSQLYmDR.[Y]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P38918"	"Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus OX=10116 GN=Akr7a3 PE=1 SV=2"	"P38918"	"Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus OX=10116 GN=Akr7a3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"933.95636"	"1866.90544"	"1866.90462"	"0.44"	"0.00041"	"5/124"	"5"	"124"	"161505.308654785"	"HCD"	"MS2"	"21.31363"	"11.1"	"100.000"	"74.8615"	"24960"	"24960"	"24929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.8"	""	"16.6"	""	"19.0"	""	"18.7"	""	"19.8"	"14.7"	""	"742"	"13"	"35.000"	"28.000"	"1.90271573460796"	"14"	"0.001587"	"0.02112"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGWIFTDLVSEDTR"	"[K].vGWIFTDLVSEDTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES54"	"Nuclear protein localization protein 4 homolog OS=Rattus norvegicus OX=10116 GN=Nploc4 PE=1 SV=3"	"Q9ES54"	"Nuclear protein localization protein 4 homolog OS=Rattus norvegicus OX=10116 GN=Nploc4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"933.99438"	"1866.98149"	"1866.97989"	"0.86"	"0.00080"	"3/118"	"3"	"118"	"59782.9401855469"	"HCD"	"MS2"	"100"	"3.4"	"100.000"	"84.4055"	"28842"	"28842"	"28817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"4.5"	""	"6.3"	""	"2.7"	""	"8.9"	"5.9"	""	"1190"	"3"	"37.000"	"30.000"	"26.8854286903079"	"13"	"0.001783"	"0.02488"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEMMPLGVNk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"933.99609"	"1866.98491"	"1866.98580"	"-0.47"	"-0.00044"	"19/102"	"19"	"102"	"916578.822143555"	"HCD"	"MS2"	"0"	"73.1"	"100.000"	"59.1780"	"18617"	"18617"	"18597"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.5"	""	"123.0"	""	"89.4"	""	"104.0"	"0.8"	"106.1"	"108.1"	""	"1196"	"52"	"37.000"	"30.000"	"0.000353753857236933"	"16"	"0"	"5.174E-06"	"1.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEMMPLGVNk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"933.99628"	"1866.98528"	"1866.98580"	"-0.28"	"-0.00026"	"11/102"	"11"	"102"	"577980.2421875"	"HCD"	"MS2"	"0"	"52.4"	"100.000"	"59.3166"	"18620"	"18620"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.0"	""	"90.1"	""	"68.7"	""	"68.8"	""	"85.5"	"82.1"	""	"1189"	"54"	"37.000"	"30.000"	"0.00025301825660801"	"20"	"0"	"1.541E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEMMPLGVNk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"933.99640"	"1866.98552"	"1866.98580"	"-0.15"	"-0.00014"	"13/102"	"13"	"102"	"881803.6171875"	"HCD"	"MS2"	"0"	"74.5"	"100.000"	"59.0262"	"18503"	"18503"	"18473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.6"	""	"143.6"	""	"102.4"	""	"98.6"	""	"111.3"	"117.0"	""	"1190"	"49"	"37.000"	"30.000"	"0.00069906404518902"	"22"	"0"	"1.14E-05"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEMMPLGVNk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"933.99792"	"1866.98857"	"1866.98580"	"1.49"	"0.00139"	"12/102"	"12"	"102"	"348016.311950684"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"59.5054"	"18751"	"18751"	"18725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.0"	""	"54.4"	""	"45.8"	""	"41.2"	""	"60.7"	"48.5"	""	"1194"	"36"	"37.000"	"30.000"	"0.0143540459160414"	"18"	"0.0001308"	"0.0002158"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALTYYLDITNPPR"	"[R].tALTYYLDITNPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"623.00342"	"1866.99570"	"1867.01628"	"-11.02"	"-0.00686"	"15/128"	"15"	"128"	"3726301.18304443"	"HCD"	"MS2"	"0"	"144.4"	"100.000"	"67.0885"	"21794"	"21794"	"21781"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"236.4"	""	"237.3"	""	"262.1"	""	"214.8"	"7.1"	"207.4"	"197.6"	""	"1201"	"26"	"37.000"	"30.000"	"0.152585410968236"	"17"	"0"	"0.0001164"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALTYYLDITNPPR"	"[R].tALTYYLDITNPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.00482"	"1866.99991"	"1867.01628"	"-8.77"	"-0.00546"	"14/128"	"14"	"128"	"4216155.96563721"	"HCD"	"MS2"	"0"	"171.3"	"100.000"	"67.0303"	"21823"	"21823"	"21806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.2"	""	"281.1"	""	"307.5"	""	"268.0"	"0.9"	"259.0"	"232.3"	""	"1202"	"28"	"37.000"	"30.000"	"0.103722857308611"	"14"	"7.476E-05"	"0.0001993"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALTYYLDITNPPR"	"[R].tALTYYLDITNPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"934.01031"	"1867.01335"	"1867.01628"	"-1.57"	"-0.00146"	"14/128"	"14"	"128"	"354058.317138672"	"HCD"	"MS2"	"16.90211"	"22.5"	"100.000"	"66.7521"	"21710"	"21710"	"21683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.0"	""	"33.0"	""	"28.8"	""	"36.1"	""	"41.6"	"45.0"	""	"1134"	"25"	"37.000"	"30.000"	"0.20025485727204"	"14"	"0"	"0.0001708"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALTYYLDITNPPR"	"[R].tALTYYLDITNPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"623.00940"	"1867.01364"	"1867.01628"	"-1.41"	"-0.00088"	"16/128"	"16"	"128"	"2205866.55474854"	"HCD"	"MS2"	"3.269652"	"36.2"	"100.000"	"66.7667"	"21663"	"21663"	"21641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.5"	""	"48.8"	""	"45.5"	""	"68.3"	""	"71.8"	"68.2"	""	"1136"	"48"	"37.000"	"30.000"	"0.000877704521657819"	"16"	"0"	"0.0001603"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALTYYLDITNPPR"	"[R].tALTYYLDITNPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.00958"	"1867.01419"	"1867.01628"	"-1.12"	"-0.00070"	"16/128"	"16"	"128"	"2449008.2074585"	"HCD"	"MS2"	"7.499309"	"40.7"	"100.000"	"66.6715"	"21677"	"21677"	"21651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.9"	""	"56.1"	""	"54.7"	""	"76.7"	""	"76.4"	"71.4"	""	"1147"	"39"	"37.000"	"30.000"	"0.00782588428833748"	"15"	"0"	"7.313E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALTYYLDITNPPR"	"[R].tALTYYLDITNPPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"934.01166"	"1867.01604"	"1867.01628"	"-0.13"	"-0.00012"	"12/128"	"12"	"128"	"322069.972045898"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"66.8496"	"21697"	"21697"	"21673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.9"	""	"24.4"	""	"19.2"	""	"37.9"	"1.3"	"41.4"	"38.1"	""	"1147"	"57"	"37.000"	"30.000"	"0.000125468129133507"	"16"	"0"	"5.544E-06"	"1.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGIFGQDEDVTSK"	"[R].iGIFGQDEDVTSk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"934.01343"	"1867.01958"	"1867.02131"	"-0.93"	"-0.00087"	"5/120"	"5"	"120"	"182370.976257324"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"54.3781"	"16607"	"16607"	"16577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.8"	""	"25.6"	""	"26.6"	""	"31.8"	"1.0"	"42.0"	"31.4"	""	"1123"	"32"	"37.000"	"30.000"	"0.0393867150062814"	"20"	"0.0002277"	"0.001176"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPSAVLGPNVSIGK"	"[K].vAPSAVLGPNVSIGk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"0"	"3"	"3"	"0.9672"	"0.0000"	"1"	"1"	"1"	"623.05109"	"1867.13871"	"1867.14170"	"-1.61"	"-0.00100"	"16/138"	"16"	"138"	"2856547.49188232"	"HCD"	"MS2"	"29.12879"	"101.6"	"100.000"	"53.6035"	"16353"	"16353"	"16340"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.9"	""	"124.4"	""	"168.6"	""	"142.0"	"2.7"	"171.8"	"195.1"	""	"339"	"61"	"32.000"	"25.000"	"1.25941743873491E-05"	"19"	"0"	"6.936E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPSAVLGPNVSIGK"	"[K].vAPSAVLGPNVSIGk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.05133"	"1867.13944"	"1867.14170"	"-1.21"	"-0.00076"	"15/138"	"15"	"138"	"1918953.2666626"	"HCD"	"MS2"	"28.97404"	"75.3"	"100.000"	"53.5484"	"16274"	"16274"	"16261"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.0"	""	"107.8"	""	"112.0"	""	"117.4"	""	"135.5"	"139.5"	""	"338"	"60"	"32.000"	"25.000"	"1.74536677573676E-05"	"16"	"0"	"8.54E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIIQSQLPIGTLK"	"[K].vIIQSQLPIGTLk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q00495"	"Macrophage colony-stimulating factor 1 receptor OS=Rattus norvegicus OX=10116 GN=Csf1r PE=1 SV=1"	"Q00495"	"Macrophage colony-stimulating factor 1 receptor OS=Rattus norvegicus OX=10116 GN=Csf1r PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.40460"	"1868.19925"	"1868.19849"	"0.41"	"0.00025"	"13/126"	"13"	"126"	"1202097.29199219"	"HCD"	"MS2"	"11.07652"	"49.9"	"100.000"	"66.3145"	"21479"	"21479"	"21449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.6"	""	"62.0"	""	"75.5"	""	"79.4"	"0.4"	"92.8"	"99.6"	""	"128"	"27"	"28.000"	"21.000"	"0.0142619849553299"	"14"	"0.0001308"	"0.0002378"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSFAAVSFYYK"	"[R].dLSFAAVSFYYk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"623.67834"	"1869.02048"	"1869.01986"	"0.33"	"0.00021"	"12/102"	"12"	"102"	"1491648.43188477"	"HCD"	"MS2"	"23.68006"	"53.3"	"100.000"	"74.6030"	"24906"	"24906"	"24879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.5"	""	"64.8"	""	"80.5"	""	"96.0"	""	"93.9"	"109.5"	""	"1112"	"35"	"37.000"	"30.000"	"0.0168684349841201"	"21"	"0"	"0.0001182"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSFAAVSFYYK"	"[R].dLSFAAVSFYYk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"623.67834"	"1869.02048"	"1869.01986"	"0.33"	"0.00021"	"13/102"	"13"	"102"	"1313171.13330078"	"HCD"	"MS2"	"17.31174"	"45.8"	"100.000"	"74.5871"	"24848"	"24848"	"24817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.2"	""	"59.3"	""	"66.7"	""	"81.5"	""	"76.7"	"94.6"	""	"1112"	"38"	"37.000"	"30.000"	"0.00859161468383358"	"20"	"0"	"6.381E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLEFFLTNLGK"	"[K].dNLEFFLTNLGk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"623.68842"	"1869.05069"	"1869.05222"	"-0.82"	"-0.00051"	"13/122"	"13"	"122"	"2842770.43426514"	"HCD"	"MS2"	"34.78229"	"97.4"	"100.000"	"82.2524"	"28015"	"28015"	"27998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.6"	""	"74.7"	""	"82.6"	""	"241.1"	"0.1"	"201.8"	"226.5"	""	"926"	"33"	"36.000"	"29.000"	"0.0252104728266041"	"15"	"0"	"0.0001335"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLEFFLTNLGK"	"[K].dNLEFFLTNLGk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"623.68896"	"1869.05234"	"1869.05222"	"0.06"	"0.00004"	"12/122"	"12"	"122"	"3734048.1953125"	"HCD"	"MS2"	"36.72582"	"126.8"	"100.000"	"82.1902"	"27938"	"27938"	"27920"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.3"	""	"92.1"	""	"119.2"	""	"275.3"	"0.3"	"259.3"	"332.5"	""	"914"	"35"	"36.000"	"29.000"	"0.0162149718879744"	"16"	"0"	"3.377E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLEFFLTNLGK"	"[K].dNLEFFLTNLGk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"935.03046"	"1869.05364"	"1869.05222"	"0.76"	"0.00071"	"12/122"	"12"	"122"	"247683.391845703"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"82.0933"	"27899"	"27899"	"27872"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.0"	""	"18.1"	""	"26.9"	""	"40.3"	""	"42.1"	"58.9"	""	"908"	"29"	"36.000"	"29.000"	"0.0580839112087517"	"14"	"0.0001308"	"0.0002931"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLEFFLTNLGK"	"[K].dNLEFFLTNLGk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"935.03076"	"1869.05425"	"1869.05222"	"1.08"	"0.00101"	"14/122"	"14"	"122"	"192771.750793457"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"82.0907"	"27949"	"27949"	"27918"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.4"	""	"13.0"	""	"14.4"	""	"31.9"	""	"26.7"	"40.8"	""	"902"	"53"	"36.000"	"29.000"	"0.000246704199265181"	"17"	"0"	"7.533E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"935.05115"	"1869.09502"	"1869.09984"	"-2.58"	"-0.00241"	"6/118"	"6"	"118"	"411986.369384766"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"50.6836"	"15167"	"15167"	"15146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.1"	""	"49.6"	""	"38.7"	""	"60.1"	""	"58.1"	"59.1"	""	"659"	"35"	"35.000"	"28.000"	"0.0112682226308267"	"16"	"0.0001859"	"0.000362"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"935.05164"	"1869.09599"	"1869.09984"	"-2.06"	"-0.00192"	"16/118"	"16"	"118"	"924507.866271973"	"HCD"	"MS2"	"0"	"58.7"	"100.000"	"50.3411"	"14977"	"14977"	"14964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.7"	""	"61.8"	""	"67.5"	""	"113.9"	""	"119.6"	"122.0"	""	"656"	"57"	"35.000"	"28.000"	"6.49940864464073E-05"	"23"	"0"	"9.24E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.8364"	"0.0000"	"1"	"1"	"1"	"623.70374"	"1869.09665"	"1869.09984"	"-1.70"	"-0.00106"	"14/118"	"14"	"118"	"23066151.581665"	"HCD"	"MS2"	"0"	"607.4"	"100.000"	"50.2255"	"14982"	"14982"	"14958"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"704.5"	""	"673.1"	""	"717.5"	""	"1208.8"	"7.6"	"1234.3"	"1221.4"	""	"642"	"55"	"35.000"	"28.000"	"0.000109019712501521"	"25"	"0"	"1.196E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"623.70380"	"1869.09684"	"1869.09984"	"-1.61"	"-0.00100"	"16/118"	"16"	"118"	"18684163.8276367"	"HCD"	"MS2"	"0"	"314.1"	"67.539"	"49.9563"	"14824"	"14824"	"14809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"374.0"	""	"339.1"	""	"374.1"	""	"621.7"	""	"644.8"	"630.7"	""	"621"	"50"	"34.000"	"27.000"	"0.000317732474103174"	"25"	"0"	"1.689E-05"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"623.70404"	"1869.09757"	"1869.09984"	"-1.22"	"-0.00076"	"13/118"	"13"	"118"	"126810830.14502"	"HCD"	"MS2"	"2.903698"	"234.6"	"7.520"	"50.5326"	"15106"	"15106"	"15092"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"262.9"	""	"259.1"	""	"275.8"	""	"444.7"	""	"503.7"	"485.5"	""	"625"	"48"	"34.000"	"27.000"	"0.000501014184590638"	"24"	"0"	"3.888E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"0.9474"	"0.0000"	"1"	"1"	"1"	"468.02991"	"1869.09780"	"1869.09984"	"-1.09"	"-0.00051"	"12/118"	"12"	"118"	"10813824.4136353"	"HCD"	"MS2"	"9.572304"	"242.7"	"100.000"	"50.3995"	"15051"	"15051"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"285.3"	""	"254.1"	""	"319.5"	""	"470.6"	"3.1"	"484.1"	"486.4"	""	"622"	"19"	"34.000"	"27.000"	"0.39788758559299"	"15"	"0"	"9.424E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"623.70416"	"1869.09793"	"1869.09984"	"-1.02"	"-0.00063"	"14/118"	"14"	"118"	"135067172.029297"	"HCD"	"MS2"	"0"	"241.3"	"7.074"	"50.2496"	"14941"	"14941"	"14924"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.5"	""	"245.6"	""	"285.3"	""	"459.4"	""	"528.6"	"502.6"	""	"622"	"37"	"34.000"	"27.000"	"0.0061342347093172"	"19"	"0"	"0.0001831"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"935.05273"	"1869.09819"	"1869.09984"	"-0.88"	"-0.00082"	"14/118"	"14"	"118"	"2030122.36395264"	"HCD"	"MS2"	"100"	"113.0"	"100.000"	"50.3400"	"15028"	"15028"	"15012"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.0"	""	"130.6"	""	"132.8"	""	"216.6"	""	"246.1"	"220.0"	""	"618"	"40"	"34.000"	"27.000"	"0.00324308610453568"	"18"	"0.0001889"	"0.0004848"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.03024"	"1869.09914"	"1869.09984"	"-0.37"	"-0.00017"	"12/118"	"12"	"118"	"4161638.09564209"	"HCD"	"MS2"	"0"	"109.2"	"100.000"	"50.4121"	"15006"	"15006"	"14984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.5"	""	"127.4"	""	"144.3"	""	"193.7"	"1.2"	"236.2"	"221.3"	""	"626"	"18"	"34.000"	"27.000"	"0.472655088253378"	"14"	"0.0001308"	"0.000246"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"623.70465"	"1869.09940"	"1869.09984"	"-0.24"	"-0.00015"	"14/118"	"14"	"118"	"12295910.0906982"	"HCD"	"MS2"	"5.621715"	"287.2"	"81.001"	"50.5451"	"15060"	"15060"	"15042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"353.2"	""	"331.2"	""	"369.1"	""	"526.3"	""	"583.6"	"562.5"	""	"624"	"55"	"34.000"	"27.000"	"0.000104268852488148"	"26"	"0"	"1.536E-05"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"0.7778"	"0.0000"	"1"	"1"	"1"	"468.03036"	"1869.09963"	"1869.09984"	"-0.11"	"-0.00005"	"8/118"	"8"	"118"	"9444520.39953613"	"HCD"	"MS2"	"23.12964"	"213.1"	"100.000"	"50.1097"	"14885"	"14885"	"14865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.1"	""	"240.8"	""	"277.4"	""	"395.2"	"1.6"	"436.7"	"403.6"	""	"623"	"18"	"34.000"	"27.000"	"0.46715182625899"	"17"	"0.0001859"	"0.0003462"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"935.05389"	"1869.10051"	"1869.09984"	"0.36"	"0.00034"	"14/118"	"14"	"118"	"1083355.1340332"	"HCD"	"MS2"	"100"	"67.9"	"100.000"	"50.0364"	"14856"	"14856"	"14840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.1"	""	"76.2"	""	"79.6"	""	"132.9"	""	"150.2"	"141.0"	""	"629"	"30"	"34.000"	"27.000"	"0.0339328744141281"	"16"	"0.0001308"	"0.0002484"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFHPEQLITGK"	"[R].qLFHPEQLITGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"623.70520"	"1869.10105"	"1869.09984"	"0.65"	"0.00040"	"14/118"	"14"	"118"	"8380581.37268066"	"HCD"	"MS2"	"19.98223"	"266.0"	"100.000"	"50.8258"	"15225"	"15225"	"15206"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"334.8"	""	"332.4"	""	"318.5"	""	"499.8"	"1.3"	"523.9"	"513.0"	""	"619"	"39"	"34.000"	"27.000"	"0.00378146994821027"	"24"	"0"	"3.536E-05"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVAPVSDIIEIK"	"[K].lNVAPVSDIIEIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"935.07550"	"1869.14372"	"1869.14612"	"-1.28"	"-0.00120"	"12/126"	"12"	"126"	"1180210.00842285"	"HCD"	"MS2"	"0"	"76.2"	"100.000"	"71.3034"	"23559"	"23559"	"23530"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.6"	""	"113.5"	""	"99.6"	""	"106.4"	"1.1"	"128.4"	"124.7"	""	"346"	"94"	"32.000"	"25.000"	"7.41388940287569E-09"	""	"0"	"2.944E-07"	"1.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVAPVSDIIEIK"	"[K].lNVAPVSDIIEIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"623.71991"	"1869.14518"	"1869.14612"	"-0.51"	"-0.00032"	"8/126"	"8"	"126"	"5144661.63269043"	"HCD"	"MS2"	"0"	"116.3"	"100.000"	"71.3994"	"23546"	"23546"	"23523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.7"	""	"166.9"	""	"162.3"	""	"184.7"	""	"195.3"	"193.3"	""	"341"	"62"	"32.000"	"25.000"	"1.17415216526699E-05"	"24"	"0"	"6.421E-06"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVAPVSDIIEIK"	"[K].lNVAPVSDIIEIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"0.9011"	"0.0000"	"1"	"1"	"1"	"935.07642"	"1869.14556"	"1869.14612"	"-0.30"	"-0.00028"	"12/126"	"12"	"126"	"1162168.27563477"	"HCD"	"MS2"	"0"	"71.4"	"100.000"	"71.4132"	"23552"	"23552"	"23523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.2"	""	"92.1"	""	"95.3"	""	"113.9"	""	"120.3"	"119.2"	""	"337"	"91"	"32.000"	"25.000"	"1.35706267342043E-08"	""	"0"	"5.47E-07"	"1.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVAPVSDIIEIK"	"[K].lNVAPVSDIIEIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"935.07660"	"1869.14592"	"1869.14612"	"-0.11"	"-0.00010"	"9/126"	"9"	"126"	"538083.634094238"	"HCD"	"MS2"	"65.78255"	"36.0"	"100.000"	"71.4546"	"23569"	"23569"	"23539"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.7"	""	"56.7"	""	"59.4"	""	"57.7"	""	"56.5"	"59.7"	""	"337"	"4"	"32.000"	"25.000"	"7.18786489180684"	"13"	"0.0008731"	"0.00949"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVAPVSDIIEIK"	"[K].lNVAPVSDIIEIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"623.72028"	"1869.14627"	"1869.14612"	"0.08"	"0.00005"	"8/126"	"8"	"126"	"1154289.08288574"	"HCD"	"MS2"	"16.89442"	"39.9"	"100.000"	"71.6443"	"23698"	"23698"	"23674"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.6"	""	"54.9"	""	"58.1"	""	"63.4"	"0.9"	"76.3"	"68.1"	""	"337"	"30"	"32.000"	"25.000"	"0.0171237904748712"	"21"	"0"	"0.0001547"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVAPVSDIIEIK"	"[K].lNVAPVSDIIEIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"623.72046"	"1869.14682"	"1869.14612"	"0.38"	"0.00023"	"13/126"	"13"	"126"	"1128806.0536499"	"HCD"	"MS2"	"4.435208"	"43.7"	"100.000"	"71.7151"	"23675"	"23675"	"23651"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.9"	""	"59.7"	""	"64.4"	""	"66.5"	""	"83.9"	"82.7"	""	"337"	"33"	"32.000"	"25.000"	"0.00799097745163512"	"17"	"0"	"8.384E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVAPVSDIIEIK"	"[K].lNVAPVSDIIEIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"623.72076"	"1869.14774"	"1869.14612"	"0.87"	"0.00054"	"13/126"	"13"	"126"	"5156413.25445557"	"HCD"	"MS2"	"1.147851"	"127.8"	"100.000"	"71.3264"	"23568"	"23568"	"23546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"217.1"	"1.8"	"185.0"	""	"194.6"	""	"198.0"	""	"204.0"	"208.6"	""	"335"	"38"	"32.000"	"25.000"	"0.00244351388596121"	"18"	"0"	"6.581E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIWKPTLVILR"	"[K].dGIWkPTLVILR.[I]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.72821"	"1869.17008"	"1869.17261"	"-1.35"	"-0.00084"	"8/114"	"8"	"114"	"5091604.59875488"	"HCD"	"MS2"	"20.70631"	"213.4"	"100.000"	"62.5892"	"20010"	"20010"	"19987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"300.5"	""	"265.9"	""	"287.4"	""	"353.3"	""	"387.3"	"428.7"	""	"220"	"8"	"30.000"	"23.000"	"1.63452920651571"	"13"	"7.476E-05"	"0.0001854"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIWKPTLVILR"	"[K].dGIWkPTLVILR.[I]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.72913"	"1869.17282"	"1869.17261"	"0.11"	"0.00007"	"7/114"	"7"	"114"	"3295318.01989746"	"HCD"	"MS2"	"31.58741"	"159.0"	"100.000"	"62.4201"	"19888"	"19888"	"19865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.4"	""	"217.5"	""	"207.4"	""	"261.2"	""	"310.6"	"305.0"	""	"219"	"1"	"30.000"	"23.000"	"8.79861103793251"	"13"	"0.0002277"	"0.001264"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGYTQQLAFK"	"[K].kGYTQQLAFk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.38300"	"1871.13443"	"1871.13578"	"-0.72"	"-0.00045"	"15/90"	"15"	"90"	"14860992.774292"	"HCD"	"MS2"	"20.56391"	"372.2"	"49.062"	"37.7382"	"9892"	"9892"	"9873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"702.2"	""	"579.3"	""	"439.6"	""	"578.2"	""	"598.5"	"624.0"	""	"421"	"18"	"33.000"	"26.000"	"0.358304366017137"	"14"	"0"	"0.0001467"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGYTQQLAFK"	"[K].kGYTQQLAFk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.38342"	"1871.13572"	"1871.13578"	"-0.03"	"-0.00002"	"15/90"	"15"	"90"	"14588452.0678711"	"HCD"	"MS2"	"21.00248"	"438.2"	"56.836"	"37.6335"	"9806"	"9806"	"9784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"844.3"	""	"646.0"	""	"527.8"	""	"714.2"	""	"710.0"	"702.0"	""	"459"	"17"	"33.000"	"26.000"	"0.422457174337125"	"14"	"0"	"6.797E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEWLSLLPDAEK"	"[R].lEWLSLLPDAEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.6889"	"0.0000"	"1"	"1"	"1"	"624.70068"	"1872.08750"	"1872.08827"	"-0.41"	"-0.00026"	"11/106"	"11"	"106"	"1954586.84161377"	"HCD"	"MS2"	"25.66534"	"46.8"	"100.000"	"86.7313"	"29832"	"29832"	"29817"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.6"	""	"40.2"	""	"55.1"	""	"92.1"	""	"102.8"	"112.8"	""	"806"	"45"	"36.000"	"29.000"	"0.00115692457455595"	"29"	"0"	"6.577E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEWLSLLPDAEK"	"[R].lEWLSLLPDAEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"624.70068"	"1872.08750"	"1872.08827"	"-0.41"	"-0.00026"	"11/106"	"11"	"106"	"1975027.11260986"	"HCD"	"MS2"	"28.06535"	"47.4"	"100.000"	"86.6543"	"29749"	"29749"	"29732"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.5"	""	"43.3"	""	"42.2"	""	"90.5"	""	"114.5"	"114.4"	""	"806"	"44"	"36.000"	"29.000"	"0.00169552831238931"	"24"	"0"	"6.859E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEWLSLLPDAEK"	"[R].lEWLSLLPDAEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"936.54791"	"1872.08855"	"1872.08827"	"0.15"	"0.00014"	"8/106"	"8"	"106"	"161112.500976563"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"86.5942"	"29725"	"29725"	"29700"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"11.4"	""	"9.4"	""	"23.2"	""	"26.1"	"25.0"	""	"806"	"19"	"36.000"	"29.000"	"0.508516496440041"	"18"	"0.0001889"	"0.0009204"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEWLSLLPDAEK"	"[R].lEWLSLLPDAEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"936.54852"	"1872.08977"	"1872.08827"	"0.80"	"0.00075"	"6/106"	"6"	"106"	"171461.967102051"	"HCD"	"MS2"	"15.6243"	"11.7"	"100.000"	"86.6827"	"29813"	"29813"	"29785"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.3"	""	"9.2"	""	"8.1"	""	"26.9"	""	"31.9"	"25.3"	""	"812"	"34"	"36.000"	"29.000"	"0.014707065735718"	"23"	"0"	"0.000183"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAQAGTAGTLLIVK"	"[R].aVAqAGTAGTLLIVk.[N]"	"N-Term(TMT6plex); Q4(Deamidated); K15(TMT6plex)"	"1"	"1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"624.72955"	"1872.17411"	"1872.15702"	"9.13"	"0.00570"	"7/140"	"7"	"140"	"1322420.57397461"	"HCD"	"MS2"	"14.1744"	"69.3"	"100.000"	"54.3712"	"16604"	"16604"	"16577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.4"	""	"94.8"	""	"104.1"	""	"108.4"	"3.1"	"115.7"	"125.3"	""	"241"	"3"	"30.000"	"23.000"	"5.71461592238595"	"15"	"0.004346"	"0.1156"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLVWVNEEDHLR"	"[K].sFLVWVNEEDHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"624.99799"	"1872.97940"	"1872.98056"	"-0.62"	"-0.00039"	"12/126"	"12"	"126"	"4811183.7076416"	"HCD"	"MS2"	"7.563534"	"67.3"	"100.000"	"61.2033"	"19391"	"19391"	"19369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.2"	""	"80.2"	""	"83.5"	""	"90.8"	""	"95.7"	"182.7"	""	"1140"	"50"	"37.000"	"30.000"	"0.000632229644699569"	"23"	"0"	"1.609E-05"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLVWVNEEDHLR"	"[K].sFLVWVNEEDHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"624.99835"	"1872.98050"	"1872.98056"	"-0.03"	"-0.00002"	"11/126"	"11"	"126"	"5111377.39752197"	"HCD"	"MS2"	"13.92447"	"62.2"	"100.000"	"61.3621"	"19509"	"19509"	"19491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.1"	""	"69.5"	""	"79.9"	""	"86.6"	""	"83.7"	"179.0"	""	"1159"	"55"	"37.000"	"30.000"	"0.000199091830807977"	"22"	"0"	"8.319E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIWQNLGLDEAK"	"[R].qIWQNLGLDEAk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"937.03271"	"1873.05815"	"1873.05837"	"-0.12"	"-0.00011"	"10/112"	"10"	"112"	"779560.116333008"	"HCD"	"MS2"	"0"	"68.7"	"100.000"	"60.6526"	"19166"	"19166"	"19145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.4"	""	"95.7"	""	"101.8"	""	"103.5"	"0.9"	"112.2"	"124.7"	""	"995"	"61"	"36.000"	"29.000"	"3.88859832782694E-05"	"28"	"0"	"1.454E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIWQNLGLDEAK"	"[R].qIWQNLGLDEAk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"937.03345"	"1873.05962"	"1873.05837"	"0.67"	"0.00062"	"10/112"	"10"	"112"	"646233.979248047"	"HCD"	"MS2"	"0"	"54.3"	"100.000"	"60.7885"	"19275"	"19275"	"19251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.0"	""	"70.0"	""	"78.8"	""	"73.7"	""	"99.1"	"103.6"	""	"988"	"69"	"36.000"	"29.000"	"6.20478802065267E-06"	"26"	"0"	"5.284E-06"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIAPK"	"[R].aLPFWNEEIAPk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"937.03491"	"1873.06255"	"1873.06239"	"0.08"	"0.00008"	"13/102"	"13"	"102"	"854684.238098145"	"HCD"	"MS2"	"18.72869"	"51.7"	"100.000"	"68.2898"	"22329"	"22329"	"22298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.7"	""	"70.6"	""	"64.8"	""	"31.8"	""	"34.5"	"177.4"	""	"973"	"35"	"36.000"	"29.000"	"0.0157791223840458"	"22"	"0"	"0.0001041"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIAPK"	"[R].aLPFWNEEIAPk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"937.03503"	"1873.06279"	"1873.06239"	"0.21"	"0.00020"	"7/102"	"7"	"102"	"850272.212463379"	"HCD"	"MS2"	"0"	"51.7"	"100.000"	"68.4548"	"22345"	"22345"	"22314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.9"	""	"76.8"	""	"57.6"	""	"32.6"	""	"26.2"	"183.6"	""	"969"	"43"	"36.000"	"29.000"	"0.00241709534174376"	"24"	"0"	"0.0001322"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIAPK"	"[R].aLPFWNEEIAPk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"625.02582"	"1873.06290"	"1873.06239"	"0.27"	"0.00017"	"12/102"	"12"	"102"	"5141391.74786377"	"HCD"	"MS2"	"72.848"	"121.7"	"100.000"	"68.2715"	"22321"	"22321"	"22298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.6"	""	"160.2"	""	"142.2"	""	"151.2"	""	"129.6"	"361.0"	""	"966"	"25"	"36.000"	"29.000"	"0.152036243571093"	"20"	"7.476E-05"	"0.0001863"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIAPK"	"[R].aLPFWNEEIAPk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"625.02588"	"1873.06308"	"1873.06239"	"0.37"	"0.00023"	"11/102"	"11"	"102"	"5789459.83410645"	"HCD"	"MS2"	"18.95229"	"125.7"	"100.000"	"68.4388"	"22338"	"22338"	"22314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.9"	""	"158.6"	""	"128.8"	""	"149.4"	"4.4"	"133.3"	"379.0"	""	"968"	"37"	"36.000"	"29.000"	"0.0108354103106708"	"19"	"0"	"4.41E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYFHLLNQIAPK"	"[K].aYFHLLNQIAPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.03961"	"1873.10428"	"1873.11001"	"-3.06"	"-0.00191"	"7/100"	"7"	"100"	"2068541.87280273"	"HCD"	"MS2"	"0"	"84.9"	"100.000"	"56.7517"	"17631"	"17631"	"17605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.7"	""	"124.7"	""	"140.2"	""	"112.1"	"0.6"	"158.7"	"148.9"	""	"735"	"2"	"35.000"	"28.000"	"21.2450297421601"	"13"	"0.0002277"	"0.001158"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYFHLLNQIAPK"	"[K].aYFHLLNQIAPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"625.04108"	"1873.10868"	"1873.11001"	"-0.71"	"-0.00044"	"12/100"	"12"	"100"	"5075536.96789551"	"HCD"	"MS2"	"18.15196"	"122.1"	"100.000"	"56.3964"	"17486"	"17486"	"17461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.3"	""	"161.6"	""	"189.8"	""	"208.2"	""	"210.5"	"231.9"	""	"702"	"36"	"35.000"	"28.000"	"0.00871579719958746"	"21"	"0"	"1.718E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYFHLLNQIAPK"	"[K].aYFHLLNQIAPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"4"	"4"	"0.8750"	"0.0000"	"1"	"1"	"1"	"469.03293"	"1873.10988"	"1873.11001"	"-0.07"	"-0.00003"	"5/100"	"5"	"100"	"3698654.41241455"	"HCD"	"MS2"	"7.086129"	"80.2"	"100.000"	"56.3200"	"17401"	"17401"	"17371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.0"	""	"110.5"	""	"127.2"	""	"143.9"	""	"132.4"	"143.9"	""	"701"	"24"	"35.000"	"28.000"	"0.145776668978155"	"17"	"0"	"0.000162"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYFHLLNQIAPK"	"[K].aYFHLLNQIAPk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"625.04199"	"1873.11142"	"1873.11001"	"0.75"	"0.00047"	"14/100"	"14"	"100"	"8193267.13433838"	"HCD"	"MS2"	"6.566229"	"180.5"	"100.000"	"56.2648"	"17378"	"17378"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"239.8"	""	"247.9"	""	"296.6"	""	"306.7"	"0.2"	"299.0"	"317.5"	""	"708"	"42"	"35.000"	"28.000"	"0.00199987689083555"	"21"	"0"	"3.083E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDELGVPLYAVVK"	"[K].lDELGVPLYAVVk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"937.57300"	"1874.13872"	"1874.14031"	"-0.85"	"-0.00079"	"5/98"	"5"	"98"	"88423.9833984375"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"79.7730"	"27004"	"27004"	"26975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.6"	""	"7.0"	""	"9.8"	""	"10.3"	""	"13.6"	"15.5"	""	"518"	"18"	"34.000"	"27.000"	"0.450090414646088"	"14"	"0.0007076"	"0.006917"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDELGVPLYAVVK"	"[K].lDELGVPLYAVVk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"937.57300"	"1874.13872"	"1874.14031"	"-0.85"	"-0.00079"	"15/98"	"15"	"98"	"558125.092590332"	"HCD"	"MS2"	"19.21054"	"37.7"	"100.000"	"79.7648"	"26949"	"26949"	"26929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.8"	""	"48.5"	""	"59.4"	""	"51.6"	""	"68.9"	"79.6"	""	"518"	"45"	"34.000"	"27.000"	"0.000853689154539616"	"15"	"0"	"8.619E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDELGVPLYAVVK"	"[K].lDELGVPLYAVVk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"937.57306"	"1874.13884"	"1874.14031"	"-0.78"	"-0.00073"	"12/98"	"12"	"98"	"454201.801879883"	"HCD"	"MS2"	"23.60049"	"32.3"	"100.000"	"79.4600"	"26825"	"26825"	"26801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.1"	""	"39.4"	""	"36.0"	""	"55.2"	""	"62.9"	"70.3"	""	"518"	"43"	"34.000"	"27.000"	"0.00117841907578863"	"16"	"0"	"0.0001369"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDELGVPLYAVVK"	"[K].lDELGVPLYAVVk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"625.38458"	"1874.13919"	"1874.14031"	"-0.59"	"-0.00037"	"15/98"	"15"	"98"	"3194192.41784668"	"HCD"	"MS2"	"4.171674"	"79.9"	"100.000"	"79.4876"	"26836"	"26836"	"26817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.2"	""	"95.4"	""	"107.0"	""	"139.6"	""	"144.5"	"170.5"	""	"520"	"40"	"34.000"	"27.000"	"0.00276040844871668"	"18"	"0"	"2.941E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDELGVPLYAVVK"	"[K].lDELGVPLYAVVk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.9859"	"0.0000"	"1"	"1"	"1"	"937.57373"	"1874.14018"	"1874.14031"	"-0.07"	"-0.00006"	"17/98"	"17"	"98"	"480383.765808105"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"79.4245"	"26862"	"26862"	"26831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.2"	""	"33.6"	""	"43.2"	""	"48.5"	""	"54.0"	"62.3"	""	"516"	"71"	"34.000"	"27.000"	"1.83916081772642E-06"	"18"	"0"	"1.704E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDELGVPLYAVVK"	"[K].lDELGVPLYAVVk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"625.38501"	"1874.14048"	"1874.14031"	"0.09"	"0.00006"	"16/98"	"16"	"98"	"3919705.37145996"	"HCD"	"MS2"	"2.681789"	"94.4"	"100.000"	"79.4753"	"26882"	"26882"	"26863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.5"	""	"106.2"	""	"131.5"	""	"159.2"	""	"180.6"	"191.2"	""	"515"	"40"	"34.000"	"27.000"	"0.00243095675643625"	"19"	"0"	"4.754E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHMWVEDLLDK"	"[R].mHMWVEDLLDk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99ML5"	"Prenylcysteine oxidase OS=Rattus norvegicus OX=10116 GN=Pcyox1 PE=1 SV=1"	"Q99ML5"	"Prenylcysteine oxidase OS=Rattus norvegicus OX=10116 GN=Pcyox1 PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"625.66785"	"1874.98899"	"1874.99088"	"-1.01"	"-0.00063"	"13/88"	"13"	"88"	"3802170.18035889"	"HCD"	"MS2"	"32.92215"	"106.6"	"100.000"	"69.6149"	"22818"	"22818"	"22794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.8"	""	"127.0"	""	"167.5"	""	"151.5"	""	"195.9"	"198.6"	""	"1224"	"28"	"37.000"	"30.000"	"0.102035529408125"	"21"	"0"	"9.358E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMVLDFVTPTPLGTR"	"[K].vMVLDFVTPTPLGTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"938.03229"	"1875.05730"	"1875.06112"	"-2.04"	"-0.00191"	"14/130"	"14"	"130"	"328627.435852051"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"78.4671"	"26471"	"26471"	"26447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.8"	""	"24.5"	""	"32.1"	""	"22.6"	""	"25.2"	"26.2"	""	"1204"	"44"	"37.000"	"30.000"	"0.00267052403646722"	"21"	"0"	"2.691E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMVLDFVTPTPLGTR"	"[K].vMVLDFVTPTPLGTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"938.03253"	"1875.05779"	"1875.06112"	"-1.78"	"-0.00167"	"6/130"	"6"	"130"	"386248.943725586"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"78.5232"	"26443"	"26443"	"26417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.1"	""	"34.7"	""	"36.4"	""	"25.3"	""	"31.4"	"34.0"	""	"1233"	"25"	"37.000"	"30.000"	"0.207937625788193"	"14"	"0"	"0.0001261"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMVLDFVTPTPLGTR"	"[K].vMVLDFVTPTPLGTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"3"	"3"	"0.9804"	"0.0000"	"1"	"1"	"1"	"625.69177"	"1875.06076"	"1875.06112"	"-0.19"	"-0.00012"	"7/130"	"7"	"130"	"2684057.12939453"	"HCD"	"MS2"	"7.092108"	"29.9"	"100.000"	"78.5367"	"26499"	"26499"	"26479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.0"	""	"43.2"	""	"50.8"	""	"48.7"	""	"51.5"	"48.0"	""	"1162"	"51"	"37.000"	"30.000"	"0.000492239127615687"	"16"	"0"	"1.936E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMVLDFVTPTPLGTR"	"[K].vMVLDFVTPTPLGTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"3"	"3"	"0.9821"	"0.0000"	"1"	"1"	"1"	"625.69214"	"1875.06186"	"1875.06112"	"0.40"	"0.00025"	"15/130"	"15"	"130"	"2303530.78436279"	"HCD"	"MS2"	"5.783741"	"28.5"	"100.000"	"78.5489"	"26453"	"26453"	"26433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.6"	""	"44.6"	""	"46.7"	""	"41.5"	""	"49.1"	"49.3"	""	"1157"	"56"	"37.000"	"30.000"	"0.000130708359307284"	"17"	"0"	"2.271E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEWGSLLEELVK"	"[R].nEWGSLLEELVk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"3"	"3"	"0.8367"	"0.0000"	"1"	"1"	"1"	"625.69232"	"1875.06241"	"1875.06279"	"-0.20"	"-0.00012"	"9/124"	"9"	"124"	"868686.62689209"	"HCD"	"MS2"	"11.63931"	"26.2"	"100.000"	"88.5548"	"30539"	"30539"	"30528"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.0"	""	"25.4"	""	"26.2"	""	"46.8"	""	"49.3"	"58.5"	""	"1146"	"49"	"37.000"	"30.000"	"0.000743283722273806"	"23"	"0"	"1.488E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEWGSLLEELVK"	"[R].nEWGSLLEELVk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"938.03516"	"1875.06304"	"1875.06279"	"0.13"	"0.00013"	"8/124"	"8"	"124"	"114549.675964355"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"88.3856"	"30473"	"30473"	"30463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.7"	""	"11.7"	""	"11.5"	""	"20.7"	""	"18.4"	"22.4"	""	"1150"	"14"	"37.000"	"30.000"	"2.05905451334016"	"15"	"0.000523"	"0.002998"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEWGSLLEELVK"	"[R].nEWGSLLEELVk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"938.03534"	"1875.06340"	"1875.06279"	"0.33"	"0.00031"	"8/124"	"8"	"124"	"129108.76763916"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"88.6772"	"30587"	"30587"	"30574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.7"	""	"10.5"	""	"14.9"	""	"21.5"	""	"18.4"	"22.8"	""	"1149"	"42"	"37.000"	"30.000"	"0.00331352333218848"	"27"	"0.0001889"	"0.000608"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEWGSLLEELVK"	"[R].nEWGSLLEELVk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"625.69269"	"1875.06351"	"1875.06279"	"0.39"	"0.00024"	"9/124"	"9"	"124"	"852374.772216797"	"HCD"	"MS2"	"4.004978"	"27.5"	"100.000"	"88.3963"	"30436"	"30436"	"30429"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.9"	""	"33.8"	""	"35.5"	""	"45.7"	""	"53.6"	"58.4"	""	"1149"	"35"	"37.000"	"30.000"	"0.017389617644442"	"21"	"0"	"3.054E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEWGSLLEELVK"	"[R].nEWGSLLEELVk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"938.03546"	"1875.06365"	"1875.06279"	"0.46"	"0.00043"	"10/124"	"10"	"124"	"220937.177001953"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"88.5073"	"30480"	"30480"	"30470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.6"	""	"17.4"	""	"23.9"	""	"33.6"	""	"37.2"	"35.2"	""	"1145"	"62"	"37.000"	"30.000"	"3.85279135722772E-05"	"24"	"0"	"3.157E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLLLGPTYATPK"	"[K].dQLLLGPTYATPk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"625.70325"	"1875.09519"	"1875.09917"	"-2.12"	"-0.00133"	"11/138"	"11"	"138"	"2770358.53314209"	"HCD"	"MS2"	"46.27452"	"105.6"	"100.000"	"53.5808"	"16344"	"16344"	"16330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.1"	""	"145.6"	""	"146.8"	""	"167.2"	""	"196.8"	"194.0"	""	"922"	"41"	"36.000"	"29.000"	"0.0034411287762704"	"23"	"0"	"5.838E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLLLGPTYATPK"	"[K].dQLLLGPTYATPk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"625.70343"	"1875.09574"	"1875.09917"	"-1.83"	"-0.00114"	"11/138"	"11"	"138"	"3502661.10205078"	"HCD"	"MS2"	"53.85271"	"140.0"	"100.000"	"53.3286"	"16190"	"16190"	"16178"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.2"	""	"175.4"	""	"199.1"	""	"240.9"	""	"257.7"	"263.6"	""	"921"	"18"	"36.000"	"29.000"	"0.729843315128343"	"22"	"0.0001889"	"0.0004667"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQDIISPLLSVK"	"[R].fGQDIISPLLSVk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"938.07019"	"1875.13310"	"1875.13556"	"-1.31"	"-0.00123"	"9/130"	"9"	"130"	"133517.813293457"	"HCD"	"MS2"	"35.36225"	"11.4"	"100.000"	"78.8246"	"26617"	"26617"	"26591"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.5"	""	"12.7"	""	"14.6"	""	"16.7"	""	"27.7"	"23.7"	""	"514"	"19"	"34.000"	"27.000"	"0.314726363211117"	"22"	"0.001058"	"0.01332"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQDIISPLLSVK"	"[R].fGQDIISPLLSVk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"0"	"3"	"3"	"0.6905"	"0.0000"	"1"	"1"	"1"	"625.71600"	"1875.13346"	"1875.13556"	"-1.12"	"-0.00070"	"13/130"	"13"	"130"	"1914590.98706055"	"HCD"	"MS2"	"37.37618"	"43.1"	"100.000"	"78.7625"	"26592"	"26592"	"26575"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.4"	""	"53.7"	""	"54.2"	""	"67.3"	""	"100.5"	"81.2"	""	"514"	"42"	"34.000"	"27.000"	"0.00177800559526167"	""	"0"	"2.285E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQDIISPLLSVK"	"[R].fGQDIISPLLSVk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"0"	"3"	"3"	"0.7027"	"0.0000"	"1"	"1"	"1"	"625.71619"	"1875.13401"	"1875.13556"	"-0.83"	"-0.00052"	"15/130"	"15"	"130"	"1934487.36218262"	"HCD"	"MS2"	"36.82909"	"46.6"	"100.000"	"78.7842"	"26549"	"26549"	"26529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.3"	""	"64.8"	""	"62.3"	""	"86.9"	"0.0"	"84.4"	"87.2"	""	"504"	"37"	"34.000"	"27.000"	"0.00536291039587643"	"26"	"0.0001308"	"0.0002456"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQDIISPLLSVK"	"[R].fGQDIISPLLSVk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"938.07117"	"1875.13506"	"1875.13556"	"-0.27"	"-0.00025"	"5/130"	"5"	"130"	"85730.7608642578"	"HCD"	"MS2"	"23.23689"	"8.2"	"100.000"	"78.9153"	"26603"	"26603"	"26577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.7"	""	"9.3"	""	"12.4"	""	"14.9"	""	"16.2"	"15.8"	""	"506"	"20"	"34.000"	"27.000"	"0.252418116147106"	"16"	"0.003107"	"0.06031"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIALGHSGFEMDK"	"[K].iIALGHSGFEMDk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.01538"	"1876.03159"	"1876.04028"	"-4.63"	"-0.00290"	"12/106"	"12"	"106"	"2963809.11486816"	"HCD"	"MS2"	"19.18364"	"125.4"	"100.000"	"50.9636"	"15282"	"15282"	"15254"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.2"	""	"138.6"	""	"148.6"	""	"201.2"	"3.8"	"282.7"	"274.2"	""	"1292"	"23"	"38.000"	"31.000"	"0.323766952923218"	"14"	"0.0001889"	"0.0004602"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIALGHSGFEMDK"	"[K].iIALGHSGFEMDk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.01605"	"1876.03360"	"1876.04028"	"-3.56"	"-0.00222"	"7/106"	"7"	"106"	"2608107.42962646"	"HCD"	"MS2"	"41.50689"	"102.8"	"100.000"	"50.8023"	"15166"	"15166"	"15138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.5"	""	"108.4"	""	"125.7"	""	"166.1"	"0.3"	"230.2"	"221.0"	""	"1295"	"21"	"38.000"	"31.000"	"0.514327531983972"	"14"	"0.0001889"	"0.0003971"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVSSLTSGLLTIGDR"	"[K].dLVSSLTSGLLTIGDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"626.02399"	"1876.05741"	"1876.05887"	"-0.78"	"-0.00049"	"15/148"	"15"	"148"	"1147482.97253418"	"HCD"	"MS2"	"13.40792"	"13.8"	"100.000"	"86.8906"	"29897"	"29897"	"29878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.4"	""	"16.6"	""	"23.1"	""	"24.7"	""	"23.8"	"25.0"	""	"1176"	"69"	"37.000"	"30.000"	"6.75114329440166E-06"	"29"	"0"	"1.913E-06"	"1.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVSSLTSGLLTIGDR"	"[K].dLVSSLTSGLLTIGDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"938.53253"	"1876.05779"	"1876.05887"	"-0.58"	"-0.00054"	"13/148"	"13"	"148"	"164647.705749512"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"86.8541"	"29882"	"29882"	"29862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"9.1"	""	"9.4"	""	"19.7"	""	"18.7"	"14.1"	""	"1172"	"54"	"37.000"	"30.000"	"0.000223304572508751"	"29"	"0"	"5.064E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVSSLTSGLLTIGDR"	"[K].dLVSSLTSGLLTIGDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"938.53314"	"1876.05901"	"1876.05887"	"0.07"	"0.00007"	"6/148"	"6"	"148"	"148206.486328125"	"HCD"	"MS2"	"13.18719"	"9.5"	"100.000"	"86.6312"	"29740"	"29740"	"29716"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.8"	""	"7.8"	""	"11.3"	""	"24.6"	""	"15.7"	"19.9"	""	"1167"	"34"	"37.000"	"30.000"	"0.0228581385292392"	"16"	"0.0001889"	"0.0007618"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVSSLTSGLLTIGDR"	"[K].dLVSSLTSGLLTIGDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.9588"	"0.0000"	"1"	"1"	"1"	"626.02454"	"1876.05906"	"1876.05887"	"0.10"	"0.00006"	"17/148"	"17"	"148"	"2094632.59362793"	"HCD"	"MS2"	"10.4425"	"15.9"	"100.000"	"86.7238"	"29778"	"29778"	"29761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.8"	""	"21.5"	""	"19.9"	""	"29.0"	""	"25.5"	"32.2"	""	"1177"	"97"	"37.000"	"30.000"	"1.20989161573667E-08"	"23"	"0"	"4.907E-07"	"1.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIPQNDLLGHPKTK"	"[K].wIPQNDLLGHPKTK.[A]"	"N-Term(TMT6plex)"	"1"	"2"	""	""	"Q62789; P09875"	"UDP-glucuronosyltransferase 2B7 OS=Rattus norvegicus OX=10116 GN=Ugt2b7 PE=2 SV=1; UDP-glucuronosyltransferase 2B1 OS=Rattus norvegicus OX=10116 GN=Ugt2b1 PE=2 SV=1"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"626.03235"	"1876.08249"	"1876.06423"	"9.73"	"0.00609"	"15/138"	"15"	"138"	"5297067.44696045"	"HCD"	"MS2"	"3.014653"	"178.9"	"100.000"	"49.3157"	"14615"	"14615"	"14590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.6"	""	"228.9"	""	"236.5"	""	"256.9"	"0.5"	"339.0"	"394.2"	""	"989"	"41"	"36.000"	"29.000"	"0.0038829902131468"	""	"0.0001889"	"0.0008219"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPQNDLLGHPKTK"	"[K].wLPQNDLLGHPKTK.[A]"	"N-Term(TMT6plex)"	"1"	"4"	"P08541"	"UDP-glucuronosyltransferase 2B2 OS=Rattus norvegicus OX=10116 GN=Ugt2b PE=1 SV=1"	"P36511; P08541; P08542; P19488"	"UDP-glucuronosyltransferase 2B15 OS=Rattus norvegicus OX=10116 GN=Ugt2b15 PE=1 SV=1; UDP-glucuronosyltransferase 2B2 OS=Rattus norvegicus OX=10116 GN=Ugt2b PE=1 SV=1; UDP-glucuronosyltransferase 2B17 OS=Rattus norvegicus OX=10116 GN=Ugt2b17 PE=2 SV=2; UDP-glucuronosyltransferase 2B37 OS=Rattus norvegicus OX=10116 GN=Ugt2b37 PE=2 SV=1"	"1"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"626.03235"	"1876.08249"	"1876.06423"	"9.73"	"0.00609"	"15/138"	"15"	"138"	"5297067.44696045"	"HCD"	"MS2"	"3.014653"	"178.9"	"100.000"	"49.3157"	"14615"	"14615"	"14590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.6"	""	"228.9"	""	"236.5"	""	"256.9"	"0.5"	"339.0"	"394.2"	""	"989"	"41"	"36.000"	"29.000"	"0.0038829902131468"	""	"0.0001889"	"0.0008219"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIPQNDLLGHPKTK"	"[K].wIPQNDLLGHPKTK.[A]"	"N-Term(TMT6plex)"	"1"	"2"	""	""	"Q62789; P09875"	"UDP-glucuronosyltransferase 2B7 OS=Rattus norvegicus OX=10116 GN=Ugt2b7 PE=2 SV=1; UDP-glucuronosyltransferase 2B1 OS=Rattus norvegicus OX=10116 GN=Ugt2b1 PE=2 SV=1"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"626.03247"	"1876.08286"	"1876.06423"	"9.93"	"0.00621"	"11/138"	"11"	"138"	"5497839.61120605"	"HCD"	"MS2"	"4.727665"	"172.1"	"100.000"	"48.9601"	"14422"	"14422"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.8"	""	"234.1"	""	"235.3"	""	"255.9"	"0.3"	"328.8"	"333.0"	""	"997"	"59"	"36.000"	"29.000"	"6.89707839917432E-05"	""	"0"	"0.0001127"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPQNDLLGHPKTK"	"[K].wLPQNDLLGHPKTK.[A]"	"N-Term(TMT6plex)"	"1"	"4"	"P08541"	"UDP-glucuronosyltransferase 2B2 OS=Rattus norvegicus OX=10116 GN=Ugt2b PE=1 SV=1"	"P36511; P08541; P08542; P19488"	"UDP-glucuronosyltransferase 2B15 OS=Rattus norvegicus OX=10116 GN=Ugt2b15 PE=1 SV=1; UDP-glucuronosyltransferase 2B2 OS=Rattus norvegicus OX=10116 GN=Ugt2b PE=1 SV=1; UDP-glucuronosyltransferase 2B17 OS=Rattus norvegicus OX=10116 GN=Ugt2b17 PE=2 SV=2; UDP-glucuronosyltransferase 2B37 OS=Rattus norvegicus OX=10116 GN=Ugt2b37 PE=2 SV=1"	"1"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"626.03247"	"1876.08286"	"1876.06423"	"9.93"	"0.00621"	"11/138"	"11"	"138"	"5497839.61120605"	"HCD"	"MS2"	"4.727665"	"172.1"	"100.000"	"48.9601"	"14422"	"14422"	"14399"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.8"	""	"234.1"	""	"235.3"	""	"255.9"	"0.3"	"328.8"	"333.0"	""	"997"	"59"	"36.000"	"29.000"	"6.89707839917432E-05"	""	"0"	"0.0001127"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLLLGPTYATPK"	"[K].dqLLLGPTYATPk.[V]"	"N-Term(TMT6plex); Q2(Deamidated); K13(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.4737"	"0.0000"	"1"	"1"	"1"	"626.03802"	"1876.09952"	"1876.08319"	"8.71"	"0.00544"	"11/138"	"11"	"138"	"2379275.59307861"	"HCD"	"MS2"	"35.87905"	"92.8"	"100.000"	"53.6012"	"16352"	"16352"	"16340"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.1"	""	"121.5"	""	"133.1"	""	"150.4"	""	"182.6"	"170.7"	""	"866"	"19"	"36.000"	"29.000"	"0.52903925285139"	"24"	"0.003415"	"0.07667"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVNLLGDEKK"	"[K].aTVnLLGDEkk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K10(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.04572"	"1876.12259"	"1876.13584"	"-7.06"	"-0.00442"	"8/108"	"8"	"108"	"4636742.8692627"	"HCD"	"MS2"	"37.7938"	"353.2"	"100.000"	"38.8448"	"10347"	"10347"	"10318"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"647.0"	""	"508.2"	""	"570.1"	""	"488.1"	""	"554.6"	"568.9"	""	"636"	"1"	"35.000"	"28.000"	"26.5721759797537"	"13"	"0.00252"	"0.03796"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTMQIWDTAGQER"	"[R].lVTMQIWDTAGQER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"938.99121"	"1876.97515"	"1876.97885"	"-1.97"	"-0.00185"	"6/142"	"6"	"142"	"575436.114685059"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"62.8035"	"20098"	"20098"	"20067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.2"	""	"48.4"	""	"45.9"	""	"50.2"	""	"74.6"	"84.2"	""	"1133"	"8"	"37.000"	"30.000"	"9.46672833007017"	"17"	"0.0004557"	"0.00259"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQQIMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"939.03357"	"1877.05986"	"1877.06068"	"-0.43"	"-0.00041"	"18/98"	"18"	"98"	"1228776.81402588"	"HCD"	"MS2"	"0"	"86.8"	"100.000"	"65.5299"	"21211"	"21211"	"21187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.0"	""	"100.1"	""	"98.9"	""	"111.3"	"1.5"	"166.0"	"187.5"	""	"1134"	"64"	"37.000"	"30.000"	"2.44671316561343E-05"	""	"0"	"1.309E-05"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQQIMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"626.35840"	"1877.06064"	"1877.06068"	"-0.02"	"-0.00001"	"9/98"	"9"	"98"	"4880820.64373779"	"HCD"	"MS2"	"3.272538"	"134.4"	"100.000"	"65.6163"	"21194"	"21194"	"21177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"206.0"	""	"153.4"	""	"163.4"	""	"193.6"	"1.0"	"262.2"	"296.1"	""	"1120"	"50"	"37.000"	"30.000"	"0.0005447384453151"	"21"	"0"	"5.267E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQQIMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"939.03400"	"1877.06072"	"1877.06068"	"0.02"	"0.00002"	"18/98"	"18"	"98"	"1226305.09698486"	"HCD"	"MS2"	"0"	"91.7"	"100.000"	"65.5932"	"21184"	"21184"	"21161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.6"	""	"100.8"	""	"103.8"	""	"124.8"	""	"180.4"	"210.3"	""	"1120"	"64"	"37.000"	"30.000"	"2.22940015509958E-05"	"24"	"0"	"5.263E-06"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPSFGISVAGPEVK"	"[K].mPSFGISVAGPEVk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"626.35846"	"1877.06083"	"1877.06068"	"0.08"	"0.00005"	"14/122"	"14"	"122"	"5178110.82403564"	"HCD"	"MS2"	"33.43972"	"120.9"	"100.000"	"62.8335"	"20110"	"20110"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.2"	""	"145.9"	""	"146.0"	""	"173.1"	""	"254.7"	"296.0"	""	"1120"	"46"	"37.000"	"30.000"	"0.00126237395880536"	"18"	"0"	"1.144E-05"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPSFGISVAGPEVK"	"[K].mPSFGISVAGPEVk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"939.03406"	"1877.06084"	"1877.06068"	"0.09"	"0.00008"	"17/122"	"17"	"122"	"595508.753540039"	"HCD"	"MS2"	"26.51212"	"40.5"	"100.000"	"62.9187"	"20145"	"20145"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.0"	""	"46.6"	""	"46.8"	""	"60.6"	""	"89.8"	"88.7"	""	"1120"	"27"	"37.000"	"30.000"	"0.112768557992294"	"14"	"0"	"8.522E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPSFGISVAGPEVK"	"[K].mPSFGISVAGPEVk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"626.35852"	"1877.06101"	"1877.06068"	"0.18"	"0.00011"	"14/122"	"14"	"122"	"5171998.08691406"	"HCD"	"MS2"	"15.14606"	"127.6"	"100.000"	"62.8053"	"20045"	"20045"	"20025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.0"	""	"144.6"	""	"148.7"	""	"186.0"	""	"284.9"	"297.6"	""	"1122"	"46"	"37.000"	"30.000"	"0.0013739244786749"	"17"	"0"	"9.415E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQQIMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"939.03430"	"1877.06133"	"1877.06068"	"0.35"	"0.00033"	"17/98"	"17"	"98"	"539019.559143066"	"HCD"	"MS2"	"0"	"45.0"	"100.000"	"65.2888"	"21060"	"21060"	"21033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.8"	""	"51.1"	""	"54.1"	""	"66.2"	"1.4"	"77.6"	"100.7"	""	"1123"	"58"	"37.000"	"30.000"	"8.79730725865726E-05"	"24"	"0"	"3.959E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQQIMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"626.35870"	"1877.06156"	"1877.06068"	"0.47"	"0.00029"	"12/98"	"12"	"98"	"3345178.42089844"	"HCD"	"MS2"	"15.37702"	"90.5"	"100.000"	"65.3142"	"21070"	"21070"	"21049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.7"	""	"90.4"	""	"109.8"	""	"144.5"	"1.5"	"161.9"	"205.9"	""	"1119"	"34"	"37.000"	"30.000"	"0.0227929265431401"	"19"	"0"	"5.351E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQQIMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"939.03448"	"1877.06169"	"1877.06068"	"0.54"	"0.00051"	"16/98"	"16"	"98"	"540851.898376465"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"65.2231"	"21086"	"21086"	"21059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.1"	""	"43.1"	""	"51.6"	""	"57.3"	"1.6"	"75.6"	"89.9"	""	"1119"	"54"	"37.000"	"30.000"	"0.000215675141113999"	"22"	"0"	"7.732E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQQIMk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"626.35876"	"1877.06174"	"1877.06068"	"0.57"	"0.00035"	"12/98"	"12"	"98"	"3634515.46655273"	"HCD"	"MS2"	"45.43818"	"106.6"	"100.000"	"65.2465"	"21095"	"21095"	"21075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"165.5"	""	"112.9"	""	"127.9"	""	"169.1"	"1.5"	"199.4"	"234.7"	""	"1120"	"35"	"37.000"	"30.000"	"0.0175464000561673"	"20"	"0"	"7.118E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPSFGISVAGPEVK"	"[K].mPSFGISVAGPEVk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"939.03595"	"1877.06462"	"1877.06068"	"2.10"	"0.00197"	"6/122"	"6"	"122"	"547464.085083008"	"HCD"	"MS2"	"25.98303"	"41.9"	"100.000"	"62.8188"	"20051"	"20051"	"20025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.5"	""	"54.8"	""	"48.9"	""	"59.0"	""	"84.7"	"96.6"	""	"1102"	"33"	"37.000"	"30.000"	"0.0278068374957504"	"15"	"0.0001308"	"0.0002908"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEDKLK"	"[K].tIDDLEDkLk.[C]"	"N-Term(TMT6plex); K8(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"1"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"626.37793"	"1877.11924"	"1877.11986"	"-0.33"	"-0.00021"	"13/88"	"13"	"88"	"11173711.0250244"	"HCD"	"MS2"	"8.470206"	"699.7"	"100.000"	"51.3799"	"15452"	"15452"	"15430"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1244.5"	""	"741.1"	""	"788.5"	""	"1429.4"	""	"1180.2"	"1237.5"	""	"617"	"17"	"34.000"	"27.000"	"0.637169778067548"	"15"	"7.476E-05"	"0.000184"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEDKLK"	"[K].tIDDLEDkLk.[C]"	"N-Term(TMT6plex); K8(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.37799"	"1877.11942"	"1877.11986"	"-0.23"	"-0.00015"	"9/88"	"9"	"88"	"7911196.0958252"	"HCD"	"MS2"	"20.31893"	"511.9"	"100.000"	"51.1891"	"15324"	"15324"	"15298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"840.8"	""	"587.7"	""	"565.4"	""	"1054.8"	""	"879.7"	"923.2"	""	"602"	"7"	"34.000"	"27.000"	"6.04736936595227"	"13"	"0.0001889"	"0.0004437"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADGYVKPQIK"	"[K].aADGYVkPQIk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P52632"	"Signal transducer and activator of transcription 5B OS=Rattus norvegicus OX=10116 GN=Stat5b PE=1 SV=1"	"P52632"	"Signal transducer and activator of transcription 5B OS=Rattus norvegicus OX=10116 GN=Stat5b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.38733"	"1877.14743"	"1877.14634"	"0.58"	"0.00036"	"6/88"	"6"	"88"	"2074272.45068359"	"HCD"	"MS2"	"9.656767"	"176.4"	"100.000"	"35.6619"	"9040"	"9040"	"9017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"261.1"	""	"218.9"	""	"234.0"	""	"286.0"	""	"349.7"	"323.9"	""	"394"	"4"	"32.000"	"25.000"	"8.48137422668671"	"13"	"0.0001889"	"0.000516"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLVELPYTVK"	"[K].kLVELPYTVk.[G]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.40662"	"1877.20530"	"1877.20788"	"-1.38"	"-0.00086"	"5/98"	"5"	"98"	"2588450.35144043"	"HCD"	"MS2"	"53.23989"	"142.3"	"100.000"	"48.5085"	"14285"	"14285"	"14255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.1"	""	"198.9"	""	"212.9"	""	"214.6"	""	"262.5"	"241.1"	""	"139"	"19"	"28.000"	"21.000"	"0.0981713593512814"	"14"	"0"	"0.0001516"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVTDVVIGPLCTSVGR"	"[K].sVTDVVIGPLcTSVGR.[I]"	"N-Term(TMT6plex); C11(Methylthio)"	"1"	"1"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"939.50507"	"1878.00286"	"1878.00262"	"0.12"	"0.00012"	"6/144"	"6"	"144"	"165332.219299316"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"74.2733"	"24720"	"24720"	"24689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.2"	""	"9.9"	""	"17.8"	""	"10.4"	""	"20.0"	"23.5"	""	"1282"	"21"	"38.000"	"31.000"	"0.569977916546945"	"20"	"0.0003839"	"0.001696"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVTDVVIGPLCTSVGR"	"[K].sVTDVVIGPLcTSVGR.[I]"	"N-Term(TMT6plex); C11(Methylthio)"	"1"	"1"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"939.50781"	"1878.00835"	"1878.00262"	"3.05"	"0.00286"	"4/144"	"4"	"144"	"159580.489379883"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"74.4068"	"24826"	"24826"	"24799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"10.0"	""	"12.6"	""	"18.5"	""	"19.0"	"18.0"	""	"1281"	"12"	"38.000"	"31.000"	"4.04128179139563"	"14"	"0.0006037"	"0.005018"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQqIMk.[F]"	"N-Term(TMT6plex); Q9(Deamidated); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"626.68347"	"1878.03586"	"1878.04469"	"-4.70"	"-0.00294"	"9/98"	"9"	"98"	"3005627.7901001"	"HCD"	"MS2"	"15.96782"	"83.7"	"100.000"	"65.1990"	"21023"	"21023"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.7"	""	"95.7"	""	"86.6"	""	"172.9"	""	"156.4"	"169.6"	""	"1171"	"6"	"37.000"	"30.000"	"14.4054523222844"	"13"	"0.000523"	"0.003163"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVqQIMk.[F]"	"N-Term(TMT6plex); Q8(Deamidated); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"626.68396"	"1878.03733"	"1878.04469"	"-3.92"	"-0.00246"	"9/98"	"9"	"98"	"2954894.69714355"	"HCD"	"MS2"	"0"	"92.0"	"100.000"	"65.1725"	"21065"	"21065"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.1"	""	"105.2"	""	"100.7"	""	"181.4"	""	"177.3"	"191.1"	""	"1175"	"5"	"37.000"	"30.000"	"20.5119935343669"	"14"	"0.0003571"	"0.001518"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLALDWDPDLK"	"[R].sFLALDWDPDLk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9R085"	"Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus OX=10116 GN=Usp15 PE=1 SV=1"	"Q9R085"	"Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus OX=10116 GN=Usp15 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"939.52277"	"1878.03826"	"1878.04132"	"-1.63"	"-0.00153"	"9/106"	"9"	"106"	"195191.359863281"	"HCD"	"MS2"	"61.84449"	"16.1"	"100.000"	"80.4401"	"27276"	"27276"	"27247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.5"	""	"20.9"	""	"26.2"	""	"27.7"	""	"28.1"	"25.5"	""	"1177"	"18"	"37.000"	"30.000"	"0.941339899839732"	"15"	"0.0007076"	"0.006958"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLALDWDPDLK"	"[R].sFLALDWDPDLk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9R085"	"Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus OX=10116 GN=Usp15 PE=1 SV=1"	"Q9R085"	"Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus OX=10116 GN=Usp15 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"939.52283"	"1878.03838"	"1878.04132"	"-1.57"	"-0.00147"	"9/106"	"9"	"106"	"175796.575378418"	"HCD"	"MS2"	"21.96262"	"15.1"	"100.000"	"80.5331"	"27263"	"27263"	"27233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.8"	""	"16.0"	""	"22.7"	""	"23.9"	""	"30.3"	"29.3"	""	"1185"	"25"	"37.000"	"30.000"	"0.198467022701013"	"16"	"0.0003839"	"0.002047"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVNNLGEIYQK"	"[K].eLVNNLGEIYQk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9254"	"0.0000"	"1"	"1"	"1"	"939.53943"	"1878.07158"	"1878.07368"	"-1.12"	"-0.00105"	"10/118"	"10"	"118"	"963525.494506836"	"HCD"	"MS2"	"0"	"76.4"	"100.000"	"55.2494"	"16963"	"16963"	"16939"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.9"	""	"83.2"	""	"104.7"	""	"119.1"	""	"137.0"	"131.3"	""	"931"	"67"	"36.000"	"29.000"	"9.8382914804396E-06"	"21"	"0"	"3.834E-06"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVNNLGEIYQK"	"[K].eLVNNLGEIYQk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9625"	"0.0000"	"1"	"1"	"1"	"939.53998"	"1878.07268"	"1878.07368"	"-0.54"	"-0.00050"	"20/118"	"20"	"118"	"845081.042541504"	"HCD"	"MS2"	"15.83071"	"69.6"	"100.000"	"55.4186"	"17086"	"17086"	"17061"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.2"	""	"80.7"	""	"85.4"	""	"101.5"	"1.2"	"130.2"	"118.1"	""	"934"	"80"	"36.000"	"29.000"	"4.99248628596982E-07"	"21"	"0"	"7.605E-07"	"1.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVNNLGEIYQK"	"[K].eLVNNLGEIYQk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9800"	"0.0000"	"1"	"1"	"1"	"626.69598"	"1878.07340"	"1878.07368"	"-0.15"	"-0.00010"	"13/118"	"13"	"118"	"6199022.57324219"	"HCD"	"MS2"	"9.187746"	"176.0"	"100.000"	"55.2080"	"16946"	"16946"	"16923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"319.9"	""	"204.6"	""	"241.1"	""	"294.4"	""	"309.4"	"296.8"	""	"922"	"50"	"36.000"	"29.000"	"0.000416582407385981"	"16"	"0"	"1.087E-05"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVNNLGEIYQK"	"[K].eLVNNLGEIYQk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.69598"	"1878.07340"	"1878.07368"	"-0.15"	"-0.00010"	"12/118"	"12"	"118"	"5795807.33117676"	"HCD"	"MS2"	"2.456469"	"168.8"	"100.000"	"55.3841"	"17072"	"17072"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"313.9"	""	"217.2"	""	"238.8"	""	"265.6"	""	"287.8"	"275.1"	""	"922"	"41"	"36.000"	"29.000"	"0.00381681337471386"	"15"	"0"	"9.03E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVmQILk.[F]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"939.54053"	"1878.07378"	"1878.08108"	"-3.89"	"-0.00365"	"13/96"	"13"	"96"	"321007.903686523"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"70.6640"	"23246"	"23246"	"23219"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.8"	""	"23.3"	""	"21.1"	""	"47.1"	""	"40.0"	"36.7"	""	"922"	"21"	"36.000"	"29.000"	"0.36872359155824"	"22"	"0.0003839"	"0.001869"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVmQILk.[F]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"626.69641"	"1878.07468"	"1878.08108"	"-3.41"	"-0.00213"	"9/96"	"9"	"96"	"3086853.35406494"	"HCD"	"MS2"	"40.37943"	"75.3"	"100.000"	"70.0283"	"23038"	"23038"	"23018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.2"	""	"79.2"	""	"85.5"	""	"167.5"	""	"125.8"	"172.0"	""	"943"	"16"	"36.000"	"29.000"	"1.14414665983136"	"20"	"0.0001889"	"0.0005531"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVmQILk.[F]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"939.54156"	"1878.07585"	"1878.08108"	"-2.78"	"-0.00261"	"14/96"	"14"	"96"	"621226.653503418"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"70.2325"	"23070"	"23070"	"23043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.8"	""	"32.8"	""	"35.4"	""	"97.4"	"1.0"	"59.1"	"65.3"	""	"926"	"27"	"36.000"	"29.000"	"0.0898630161325455"	"16"	"0.0003839"	"0.001936"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVmQILk.[F]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"626.69739"	"1878.07761"	"1878.08108"	"-1.85"	"-0.00116"	"12/96"	"12"	"96"	"3718132.70880127"	"HCD"	"MS2"	"50.02056"	"69.7"	"100.000"	"70.2773"	"23140"	"23140"	"23114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.3"	""	"69.9"	""	"78.9"	""	"167.1"	""	"127.2"	"132.0"	""	"930"	"11"	"36.000"	"29.000"	"3.97606021491378"	"15"	"0.0001889"	"0.0005199"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVmQILk.[F]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"939.54279"	"1878.07829"	"1878.08108"	"-1.48"	"-0.00139"	"16/96"	"16"	"96"	"433066.015930176"	"HCD"	"MS2"	"36.8272"	"30.0"	"100.000"	"69.9703"	"23015"	"23015"	"22986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.8"	""	"34.7"	""	"31.4"	""	"75.0"	""	"59.8"	"53.6"	""	"913"	"31"	"36.000"	"29.000"	"0.0340753858214195"	"22"	"0.0003839"	"0.001783"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVMQILK"	"[K].eEIFGPVmQILk.[F]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"939.54523"	"1878.08318"	"1878.08108"	"1.12"	"0.00105"	"9/96"	"9"	"96"	"637661.915344238"	"HCD"	"MS2"	"0"	"33.5"	"100.000"	"70.3604"	"23174"	"23174"	"23146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.8"	""	"35.4"	""	"33.4"	""	"87.4"	""	"61.2"	"59.6"	""	"887"	"34"	"36.000"	"29.000"	"0.0195386081965156"	"16"	"0.0001889"	"0.0009472"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEGFLTDLSQLK"	"[R].iGEGFLTDLSQLk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"627.03534"	"1879.09146"	"1879.09409"	"-1.39"	"-0.00087"	"9/114"	"9"	"114"	"2602041.56384277"	"HCD"	"MS2"	"8.149528"	"76.0"	"100.000"	"80.0275"	"27107"	"27107"	"27087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.4"	""	"90.3"	""	"106.0"	""	"128.7"	"2.0"	"145.8"	"147.3"	""	"773"	"48"	"35.000"	"28.000"	"0.000638483235015515"	"27"	"0"	"1.374E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEGFLTDLSQLK"	"[R].iGEGFLTDLSQLk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"940.04980"	"1879.09233"	"1879.09409"	"-0.93"	"-0.00088"	"9/114"	"9"	"114"	"183538.238525391"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"80.3502"	"27239"	"27239"	"27215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.0"	""	"18.1"	""	"28.3"	""	"27.2"	""	"27.0"	"28.6"	""	"759"	"15"	"35.000"	"28.000"	"1.17818036369471"	"13"	"0.0006037"	"0.004698"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEGFLTDLSQLK"	"[R].iGEGFLTDLSQLk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"940.04987"	"1879.09245"	"1879.09409"	"-0.87"	"-0.00082"	"11/114"	"11"	"114"	"340740.42565918"	"HCD"	"MS2"	"9.545075"	"34.3"	"100.000"	"80.0555"	"27068"	"27068"	"27041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.6"	""	"34.8"	""	"39.8"	""	"68.5"	"2.9"	"60.7"	"62.3"	""	"754"	"58"	"35.000"	"28.000"	"5.89306661275639E-05"	"25"	"0"	"9.77E-07"	"1.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEGFLTDLSQLK"	"[R].iGEGFLTDLSQLk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"627.03571"	"1879.09256"	"1879.09409"	"-0.81"	"-0.00051"	"13/114"	"13"	"114"	"1391253.22790527"	"HCD"	"MS2"	"1.139835"	"47.0"	"100.000"	"80.3433"	"27236"	"27236"	"27215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.6"	""	"53.3"	""	"72.4"	""	"85.8"	""	"87.3"	"89.7"	""	"752"	"20"	"35.000"	"28.000"	"0.39919752950672"	"18"	"0"	"0.0001425"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNPFGNTFLNR"	"[R].kLNPFGNTFLNR.[F]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.03619"	"1879.09403"	"1879.09542"	"-0.74"	"-0.00046"	"6/110"	"6"	"110"	"17938141.7583008"	"HCD"	"MS2"	"20.68565"	"674.5"	"100.000"	"49.1492"	"14499"	"14499"	"14479"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"953.4"	""	"1134.1"	""	"1049.2"	""	"1060.7"	"1.4"	"1044.8"	"1132.8"	""	"749"	"34"	"35.000"	"28.000"	"0.0159754029791197"	"15"	"0"	"9.551E-06"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEGFLTDLSQLK"	"[R].iGEGFLTDLSQLk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.7045"	"0.0000"	"1"	"1"	"1"	"627.03625"	"1879.09421"	"1879.09409"	"0.07"	"0.00004"	"9/114"	"9"	"114"	"2976401.9675293"	"HCD"	"MS2"	"13.70971"	"91.1"	"100.000"	"80.0695"	"27074"	"27074"	"27057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.2"	""	"104.5"	""	"126.3"	""	"150.6"	"3.4"	"167.7"	"179.4"	""	"749"	"44"	"35.000"	"28.000"	"0.00164987796383204"	""	"0"	"1.477E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEGFLTDLSQLK"	"[R].iGEGFLTDLSQLk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"940.05078"	"1879.09429"	"1879.09409"	"0.11"	"0.00010"	"15/114"	"15"	"114"	"292215.37487793"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"80.0132"	"27102"	"27102"	"27071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.0"	""	"32.8"	""	"35.0"	""	"43.8"	""	"49.6"	"49.8"	""	"753"	"46"	"35.000"	"28.000"	"0.000947905363301209"	""	"0"	"0.0001399"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNPFGNTFLNR"	"[R].kLNPFGNTFLNR.[F]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.03644"	"1879.09476"	"1879.09542"	"-0.35"	"-0.00022"	"6/110"	"6"	"110"	"11981275.0340576"	"HCD"	"MS2"	"3.868653"	"318.2"	"66.363"	"49.4592"	"14626"	"14626"	"14607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"451.4"	""	"505.2"	""	"502.5"	""	"486.6"	"3.7"	"503.9"	"556.1"	""	"752"	"31"	"35.000"	"28.000"	"0.0286541707769555"	"14"	"0"	"1.563E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNPFGNTFLNR"	"[R].kLNPFGNTFLNR.[F]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.03644"	"1879.09476"	"1879.09542"	"-0.35"	"-0.00022"	"9/110"	"9"	"110"	"14820066.8474731"	"HCD"	"MS2"	"18.35229"	"564.9"	"100.000"	"49.4193"	"14657"	"14657"	"14638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"767.2"	""	"945.9"	""	"904.6"	""	"887.8"	""	"900.2"	"943.7"	""	"752"	"10"	"35.000"	"28.000"	"3.45293056277827"	"13"	"0.0001889"	"0.0006081"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEGFLTDLSQLK"	"[R].iGEGFLTDLSQLk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"940.05121"	"1879.09514"	"1879.09409"	"0.56"	"0.00053"	"10/114"	"10"	"114"	"170654.033874512"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"80.3601"	"27192"	"27192"	"27169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.4"	""	"24.3"	""	"24.0"	""	"30.0"	""	"33.2"	"31.4"	""	"762"	"16"	"35.000"	"28.000"	"0.970342326234902"	"14"	"0.0006037"	"0.003816"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLNPFGNTFLNR"	"[R].kLNPFGNTFLNR.[F]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.03687"	"1879.09604"	"1879.09542"	"0.33"	"0.00021"	"6/110"	"6"	"110"	"11263783.7639771"	"HCD"	"MS2"	"3.918704"	"393.4"	"84.735"	"49.7405"	"14784"	"14784"	"14766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"556.9"	""	"653.8"	""	"625.3"	""	"565.9"	"13.8"	"652.1"	"653.3"	""	"744"	"34"	"35.000"	"28.000"	"0.0157958477788028"	"15"	"0"	"1.467E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLLTTQGVDMISK"	"[R].vLLTTQGVDmISk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"627.03699"	"1879.09641"	"1879.09746"	"-0.56"	"-0.00035"	"15/126"	"15"	"126"	"3341745.23583984"	"HCD"	"MS2"	"28.67659"	"147.6"	"100.000"	"52.5312"	"15923"	"15923"	"15894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.8"	""	"177.6"	""	"187.4"	""	"302.3"	"1.3"	"283.4"	"283.1"	""	"745"	"44"	"35.000"	"28.000"	"0.00166389638076234"	"17"	"0"	"0.0001056"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KHTLSYVDTK"	"[R].kHTLSYVDTk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"1"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"627.04669"	"1879.12552"	"1879.12561"	"-0.05"	"-0.00003"	"9/102"	"9"	"102"	"835625.023498535"	"HCD"	"MS2"	"0"	"64.8"	"100.000"	"29.7210"	"6618"	"6618"	"6589"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.1"	""	"82.9"	""	"112.5"	""	"99.3"	""	"102.2"	"115.8"	""	"576"	"21"	"34.000"	"27.000"	"0.21796787376604"	"15"	"0"	"5.235E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KHTLSYVDTK"	"[R].kHTLSYVDTk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.04706"	"1879.12662"	"1879.12561"	"0.54"	"0.00034"	"8/102"	"8"	"102"	"1129186.36572266"	"HCD"	"MS2"	"0"	"79.2"	"100.000"	"29.6310"	"6540"	"6540"	"6512"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.2"	""	"127.4"	""	"118.2"	""	"123.6"	""	"139.5"	"135.4"	""	"578"	"36"	"34.000"	"27.000"	"0.00768949542281855"	"15"	"0"	"3.603E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FILPEGASQGMTPFR"	"[K].fILPEGASQGMTPFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"3"	"940.50012"	"1879.99297"	"1879.99377"	"-0.43"	"-0.00040"	"4/138"	"4"	"138"	"213004.169311523"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"66.2514"	"21506"	"21506"	"21475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.8"	""	"18.0"	""	"19.3"	""	"22.8"	""	"33.0"	"30.4"	""	"1156"	"14"	"37.000"	"30.000"	"2.08894900605696"	"25"	"0.0006037"	"0.003995"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEVAQHLGESTVR"	"[R].lVLEVAQHLGESTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9861"	"0.0000"	"1"	"1"	"1"	"627.36432"	"1880.07840"	"1880.08028"	"-1.00"	"-0.00062"	"10/146"	"10"	"146"	"23368820.1358643"	"HCD"	"MS2"	"3.407055"	"89.7"	"37.813"	"60.1493"	"19014"	"19014"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.1"	""	"98.0"	""	"129.9"	""	"171.8"	"1.9"	"193.1"	"168.2"	""	"850"	"72"	"36.000"	"29.000"	"2.45690820147431E-06"	"18"	"0"	"5.025E-06"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEVAQHLGESTVR"	"[R].lVLEVAQHLGESTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9634"	"0.0000"	"1"	"1"	"1"	"627.36487"	"1880.08005"	"1880.08028"	"-0.12"	"-0.00008"	"12/146"	"12"	"146"	"23207835.5834961"	"HCD"	"MS2"	"2.694852"	"90.4"	"36.355"	"60.0575"	"18923"	"18923"	"18905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.5"	""	"91.3"	""	"138.9"	""	"179.1"	"5.2"	"179.3"	"186.2"	""	"840"	"82"	"36.000"	"29.000"	"2.88568744805978E-07"	"21"	"0"	"7.158E-07"	"1.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEVAQHLGESTVR"	"[R].lVLEVAQHLGESTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"940.54382"	"1880.08037"	"1880.08028"	"0.05"	"0.00005"	"9/146"	"9"	"146"	"173978.549072266"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"60.1637"	"18967"	"18967"	"18937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.6"	""	"18.2"	""	"14.2"	""	"17.3"	""	"20.5"	"26.2"	""	"840"	"48"	"36.000"	"29.000"	"0.000698633313155471"	"18"	"0"	"2.199E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEVAQHLGESTVR"	"[R].lVLEVAQHLGESTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"940.54425"	"1880.08122"	"1880.08028"	"0.50"	"0.00047"	"7/146"	"7"	"146"	"189123.99786377"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"60.2947"	"19074"	"19074"	"19043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"13.8"	""	"13.0"	""	"21.4"	""	"23.7"	"24.3"	""	"831"	"45"	"36.000"	"29.000"	"0.00126931972254105"	"25"	"0"	"8.598E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNVLLDADGHIK"	"[K].lDNVLLDADGHIk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09217"	"Protein kinase C zeta type OS=Rattus norvegicus OX=10116 GN=Prkcz PE=1 SV=2"	"P09217"	"Protein kinase C zeta type OS=Rattus norvegicus OX=10116 GN=Prkcz PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"627.69824"	"1881.08017"	"1881.08458"	"-2.34"	"-0.00147"	"14/130"	"14"	"130"	"1818864.56256104"	"HCD"	"MS2"	"0"	"91.8"	"100.000"	"54.3503"	"16649"	"16649"	"16621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.0"	""	"99.5"	""	"108.9"	""	"175.7"	""	"188.2"	"181.1"	""	"823"	"12"	"36.000"	"29.000"	"2.44551223270308"	"14"	"0.0001889"	"0.0004462"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPLALFNDQTLK"	"[K].yPLALFNDQTLk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"627.70001"	"1881.08548"	"1881.08861"	"-1.66"	"-0.00104"	"12/102"	"12"	"102"	"2799591.72338867"	"HCD"	"MS2"	"35.93013"	"81.1"	"100.000"	"70.5373"	"23194"	"23194"	"23171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.0"	""	"107.4"	""	"112.6"	""	"147.9"	""	"151.7"	"143.5"	""	"798"	"31"	"36.000"	"29.000"	"0.033494453462124"	"22"	"0.0001308"	"0.0002342"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHKYH"	"[K].vVAGVASALAHkYH.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.9714"	"0.0000"	"1"	"1"	"1"	"471.03229"	"1881.10732"	"1881.11107"	"-1.99"	"-0.00094"	"8/104"	"8"	"104"	"34927663.4887695"	"HCD"	"MS2"	"19.73394"	"190.8"	"23.456"	"45.5425"	"13077"	"13077"	"13051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.9"	""	"176.9"	"3.6"	"181.2"	""	"435.6"	"7.4"	"415.0"	"381.5"	""	"628"	"35"	"34.000"	"27.000"	"0.00887012312123531"	"16"	"0.0001889"	"0.000772"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHKYH"	"[K].vVAGVASALAHkYH.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.03244"	"1881.10793"	"1881.11107"	"-1.67"	"-0.00079"	"9/104"	"9"	"104"	"35461951.487793"	"HCD"	"MS2"	"20.52996"	"266.9"	"30.002"	"45.5510"	"13028"	"13028"	"13020"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.3"	""	"235.6"	""	"272.7"	""	"610.2"	"11.6"	"583.4"	"557.9"	""	"628"	"27"	"34.000"	"27.000"	"0.0641105714626232"	"14"	"0.0001889"	"0.0007201"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHKYH"	"[K].vVAGVASALAHkYH.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.9688"	"0.0000"	"1"	"1"	"1"	"471.03256"	"1881.10842"	"1881.11107"	"-1.41"	"-0.00066"	"18/104"	"18"	"104"	"32115904.491333"	"HCD"	"MS2"	"20.18056"	"150.9"	"29.312"	"45.2761"	"12919"	"12919"	"12896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.5"	"2.3"	"124.3"	""	"137.3"	""	"390.3"	"11.5"	"314.9"	"301.6"	""	"624"	"64"	"34.000"	"27.000"	"1.15386392091443E-05"	"19"	"0"	"8.854E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAGVASALAHKYH"	"[K].vVAGVASALAHkYH.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.9714"	"0.0000"	"1"	"1"	"1"	"471.03275"	"1881.10915"	"1881.11107"	"-1.02"	"-0.00048"	"9/104"	"9"	"104"	"37672247.6757813"	"HCD"	"MS2"	"26.41725"	"215.2"	"22.594"	"45.8381"	"13194"	"13194"	"13181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.0"	""	"182.1"	""	"216.0"	""	"470.8"	"14.9"	"486.0"	"443.1"	""	"636"	"35"	"35.000"	"28.000"	"0.0111796220087999"	"15"	"0.0001889"	"0.0007985"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSNEEIAMATVTALR"	"[K].fSNEEIAMATVTALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9661"	"0.0000"	"1"	"1"	"1"	"628.00189"	"1881.99112"	"1881.99416"	"-1.62"	"-0.00101"	"19/156"	"19"	"156"	"5293432.47711182"	"HCD"	"MS2"	"3.031961"	"57.1"	"100.000"	"67.6330"	"22060"	"22060"	"22042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.6"	""	"73.0"	""	"73.4"	""	"83.9"	"2.1"	"119.0"	"128.9"	""	"1179"	"59"	"37.000"	"30.000"	"8.25056726656558E-05"	"18"	"0"	"4.444E-06"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSNEEIAMATVTALR"	"[K].fSNEEIAMATVTALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"941.50018"	"1881.99309"	"1881.99416"	"-0.57"	"-0.00054"	"5/156"	"5"	"156"	"100437.827453613"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"68.0559"	"22182"	"22182"	"22154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.4"	""	"9.7"	""	"9.1"	""	"12.8"	""	"15.3"	"18.5"	""	"1180"	"23"	"37.000"	"30.000"	"0.277876622574202"	"14"	"0.0006037"	"0.004541"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSNEEIAMATVTALR"	"[K].fSNEEIAMATVTALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"628.00256"	"1881.99314"	"1881.99416"	"-0.55"	"-0.00034"	"18/156"	"18"	"156"	"4996114.16094971"	"HCD"	"MS2"	"3.861708"	"53.2"	"100.000"	"67.7671"	"22064"	"22064"	"22042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.0"	""	"61.4"	""	"75.2"	""	"85.2"	"1.0"	"105.0"	"115.1"	""	"1180"	"60"	"37.000"	"30.000"	"6.13552897839145E-05"	"19"	"0"	"1.389E-05"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSNEEIAMATVTALR"	"[K].fSNEEIAMATVTALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"941.50049"	"1881.99370"	"1881.99416"	"-0.25"	"-0.00023"	"7/156"	"7"	"156"	"183867.192260742"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"67.8700"	"22157"	"22157"	"22138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.0"	""	"13.3"	""	"16.2"	""	"10.2"	""	"21.4"	"32.1"	""	"1181"	"37"	"37.000"	"30.000"	"0.0125089225036424"	"15"	"0.0001859"	"0.000314"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSNEEIAMATVTALR"	"[K].fSNEEIAMATVTALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"941.50061"	"1881.99394"	"1881.99416"	"-0.12"	"-0.00011"	"11/156"	"11"	"156"	"908238.973571777"	"HCD"	"MS2"	"100"	"50.4"	"100.000"	"67.5802"	"22039"	"22039"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.1"	""	"71.6"	""	"66.3"	""	"47.6"	""	"92.0"	"116.4"	""	"1177"	"61"	"37.000"	"30.000"	"4.71787540303649E-05"	"21"	"0"	"3.024E-07"	"1.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSNEEIAMATVTALR"	"[K].fSNEEIAMATVTALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"941.50104"	"1881.99480"	"1881.99416"	"0.34"	"0.00032"	"22/156"	"22"	"156"	"860383.354492188"	"HCD"	"MS2"	"0"	"48.5"	"100.000"	"67.7276"	"22048"	"22048"	"22029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.7"	""	"62.7"	""	"64.3"	""	"39.1"	"1.0"	"85.7"	"124.2"	""	"1195"	"82"	"37.000"	"30.000"	"3.82241564200882E-07"	"23"	"0"	"2.395E-07"	"1.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEMLEIVQAIYK"	"[R].sEMLEIVQAIYk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"941.54102"	"1882.07475"	"1882.07599"	"-0.66"	"-0.00062"	"10/104"	"10"	"104"	"149900.405151367"	"HCD"	"MS2"	"38.46994"	"11.3"	"100.000"	"81.4699"	"27645"	"27645"	"27616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.5"	""	"16.2"	""	"15.4"	""	"19.2"	""	"23.1"	"20.6"	""	"890"	"24"	"36.000"	"29.000"	"0.158255936763199"	"29"	"0.0001889"	"0.0006553"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEMLEIVQAIYK"	"[R].sEMLEIVQAIYk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.2414"	"0.0000"	"1"	"1"	"1"	"941.54150"	"1882.07573"	"1882.07599"	"-0.14"	"-0.00013"	"7/104"	"7"	"104"	"213817.53314209"	"HCD"	"MS2"	"31.6414"	"17.1"	"100.000"	"81.4120"	"27672"	"27672"	"27646"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.0"	""	"26.6"	""	"21.1"	""	"23.6"	""	"33.6"	"35.9"	""	"879"	"29"	"36.000"	"29.000"	"0.0494263886058464"	""	"0.0001308"	"0.0003025"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSALAILENANVLAR"	"[R].tPSALAILENANVLAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"941.55109"	"1882.09490"	"1882.09593"	"-0.55"	"-0.00052"	"10/148"	"10"	"148"	"243632.707092285"	"HCD"	"MS2"	"19.19368"	"12.1"	"100.000"	"75.9459"	"25454"	"25454"	"25423"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.2"	""	"18.6"	""	"19.3"	""	"18.3"	""	"19.5"	"22.4"	""	"706"	"35"	"35.000"	"28.000"	"0.0102985173594241"	"18"	"0.0001889"	"0.001066"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSALAILENANVLAR"	"[R].tPSALAILENANVLAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"628.03650"	"1882.09494"	"1882.09593"	"-0.52"	"-0.00033"	"10/148"	"10"	"148"	"3336376.68499756"	"HCD"	"MS2"	"44.29364"	"44.5"	"100.000"	"75.9574"	"25458"	"25458"	"25439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.7"	""	"55.7"	""	"63.7"	""	"81.5"	""	"94.7"	"85.1"	""	"704"	"49"	"35.000"	"28.000"	"0.000464026371971856"	"23"	"0"	"8.436E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSALAILENANVLAR"	"[R].tPSALAILENANVLAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"941.55151"	"1882.09575"	"1882.09593"	"-0.09"	"-0.00009"	"12/148"	"12"	"148"	"225925.76739502"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"75.9974"	"25423"	"25423"	"25393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.9"	""	"18.8"	""	"21.5"	""	"21.6"	""	"22.3"	"30.6"	""	"689"	"22"	"35.000"	"28.000"	"0.241095567622783"	"14"	"0.0001889"	"0.0006443"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSALAILENANVLAR"	"[R].tPSALAILENANVLAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"628.03680"	"1882.09586"	"1882.09593"	"-0.04"	"-0.00002"	"19/148"	"19"	"148"	"2905520.18237305"	"HCD"	"MS2"	"48.0239"	"42.8"	"100.000"	"75.9697"	"25411"	"25411"	"25393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.7"	""	"50.5"	""	"62.9"	""	"86.6"	""	"76.9"	"88.4"	""	"689"	"48"	"35.000"	"28.000"	"0.000506045102648312"	"21"	"0"	"5.845E-06"	"1.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGLAFEIPAHIK"	"[K].dLGLAFEIPAHIk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"628.04504"	"1882.12058"	"1882.12024"	"0.18"	"0.00011"	"8/108"	"8"	"108"	"6340554.29077148"	"HCD"	"MS2"	"15.44633"	"141.0"	"100.000"	"64.4695"	"20778"	"20778"	"20755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"172.3"	""	"152.0"	""	"181.5"	""	"261.6"	""	"288.9"	"285.2"	""	"525"	"30"	"34.000"	"27.000"	"0.0260093385534352"	"15"	"0"	"1.911E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGLAFEIPAHIK"	"[K].dLGLAFEIPAHIk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.04517"	"1882.12094"	"1882.12024"	"0.37"	"0.00023"	"6/108"	"6"	"108"	"2354082.35791016"	"HCD"	"MS2"	"24.48642"	"76.6"	"100.000"	"64.7311"	"20832"	"20832"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.1"	""	"91.2"	""	"105.4"	""	"134.3"	"4.0"	"157.0"	"146.0"	""	"524"	"14"	"34.000"	"27.000"	"1.05269192442422"	"13"	"0.0001308"	"0.0002106"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGLAFEIPAHIK"	"[K].dLGLAFEIPAHIk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.04523"	"1882.12113"	"1882.12024"	"0.47"	"0.00030"	"10/108"	"10"	"108"	"5201672.27642822"	"HCD"	"MS2"	"55.58434"	"129.4"	"100.000"	"64.4202"	"20705"	"20705"	"20681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.3"	""	"155.5"	""	"170.8"	""	"237.5"	""	"261.3"	"255.0"	""	"524"	"42"	"34.000"	"27.000"	"0.00167225033381924"	"15"	"0"	"4.874E-06"	"1.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFNLSNFLDK"	"[R].nTLFNLSNFLDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"O55012; Q05140"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1; Clathrin coat assembly protein AP180 OS=Rattus norvegicus OX=10116 GN=Snap91 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"942.53503"	"1884.06279"	"1884.06312"	"-0.17"	"-0.00016"	"10/128"	"10"	"128"	"310272.615844727"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"81.2576"	"27558"	"27558"	"27536"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.7"	""	"40.0"	""	"36.4"	""	"58.2"	""	"51.1"	"48.2"	""	"1027"	"18"	"37.000"	"30.000"	"0.900617637695744"	"19"	"0.0003839"	"0.001742"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFNLSNFLDK"	"[R].nTLFNLSNFLDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"O55012; Q05140"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1; Clathrin coat assembly protein AP180 OS=Rattus norvegicus OX=10116 GN=Snap91 PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"942.53564"	"1884.06401"	"1884.06312"	"0.47"	"0.00045"	"6/128"	"6"	"128"	"353200.116760254"	"HCD"	"MS2"	"15.62353"	"32.4"	"100.000"	"81.2157"	"27592"	"27592"	"27566"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.1"	""	"43.6"	""	"42.8"	""	"60.7"	""	"58.2"	"62.8"	""	"1035"	"12"	"37.000"	"30.000"	"3.00545586067279"	"23"	"0.0006037"	"0.005107"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSVGLIQLNRPK"	"[K].nSSVGLIQLNRPk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.71930"	"1884.14334"	"1884.14310"	"0.13"	"0.00008"	"14/122"	"14"	"122"	"21303938.7514038"	"HCD"	"MS2"	"24.71456"	"560.7"	"55.409"	"37.5142"	"9757"	"9757"	"9736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"880.5"	""	"801.7"	""	"802.1"	""	"873.7"	""	"893.0"	"1055.1"	""	"401"	"46"	"33.000"	"26.000"	"0.000557332510185737"	"15"	"0"	"2.694E-07"	"1.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSVGLIQLNRPK"	"[K].nSSVGLIQLNRPk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"628.71948"	"1884.14389"	"1884.14310"	"0.42"	"0.00026"	"13/122"	"13"	"122"	"22633712.4465942"	"HCD"	"MS2"	"37.24295"	"693.6"	"63.620"	"37.6051"	"9838"	"9838"	"9809"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1098.1"	""	"983.2"	""	"1029.4"	""	"1066.2"	""	"1105.2"	"1278.9"	""	"400"	"39"	"33.000"	"26.000"	"0.00277990526242671"	"22"	"0"	"2.3E-07"	"1.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPGKPESILK"	"[K].lDPGkPESILk.[M]"	"N-Term(TMT6plex); K5(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2R7"	"LRP chaperone MESD OS=Rattus norvegicus OX=10116 GN=Mesd PE=2 SV=1"	"Q5U2R7"	"LRP chaperone MESD OS=Rattus norvegicus OX=10116 GN=Mesd PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"628.73059"	"1884.17722"	"1884.17731"	"-0.05"	"-0.00003"	"9/104"	"9"	"104"	"4761973.85760498"	"HCD"	"MS2"	"0"	"284.5"	"100.000"	"44.1279"	"12500"	"12500"	"12476"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.6"	""	"354.3"	""	"399.9"	""	"560.4"	"1.0"	"489.1"	"516.8"	""	"232"	"11"	"30.000"	"23.000"	"0.921420752280167"	"13"	"0.0002277"	"0.001115"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEYLSLFIDDK"	"[R].sPEYLSLFIDDk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"943.02008"	"1885.03288"	"1885.03590"	"-1.60"	"-0.00151"	"8/108"	"8"	"108"	"186774.676818848"	"HCD"	"MS2"	"100"	"19.0"	"100.000"	"73.6321"	"24458"	"24458"	"24433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.1"	""	"21.7"	""	"24.1"	""	"30.2"	""	"36.6"	"41.0"	""	"1094"	"20"	"37.000"	"30.000"	"0.579411787671977"	"14"	"0.00103"	"0.01142"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEYLSLFIDDK"	"[R].sPEYLSLFIDDk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"943.02106"	"1885.03484"	"1885.03590"	"-0.56"	"-0.00053"	"10/108"	"10"	"108"	"243228.35369873"	"HCD"	"MS2"	"100"	"20.8"	"100.000"	"73.5537"	"24478"	"24478"	"24447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.9"	""	"22.1"	""	"24.7"	""	"33.7"	""	"44.8"	"40.4"	""	"1090"	"29"	"37.000"	"30.000"	"0.0664349331414052"	"18"	"0.0003839"	"0.001941"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGSTVFVANLDYK"	"[R].lGSTVFVANLDYk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"943.04358"	"1885.07988"	"1885.08352"	"-1.93"	"-0.00182"	"15/120"	"15"	"120"	"493750.472900391"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"64.7966"	"20912"	"20912"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.4"	""	"52.4"	""	"54.4"	""	"87.3"	""	"99.6"	"84.7"	""	"882"	"37"	"36.000"	"29.000"	"0.00853962086100453"	"15"	"0"	"2.851E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGSTVFVANLDYK"	"[R].lGSTVFVANLDYk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"943.04486"	"1885.08245"	"1885.08352"	"-0.57"	"-0.00054"	"15/120"	"15"	"120"	"344472.912536621"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"64.8580"	"20884"	"20884"	"20857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.6"	""	"32.0"	""	"41.4"	""	"52.1"	"0.4"	"65.2"	"66.0"	""	"871"	"60"	"36.000"	"29.000"	"3.9901402344813E-05"	"17"	"0"	"1.279E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLTDHTNKK"	"[K].iQLTDHTNkk.[C]"	"N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.05365"	"1885.14640"	"1885.14741"	"-0.54"	"-0.00034"	"8/94"	"8"	"94"	"593260.756530762"	"HCD"	"MS2"	"0"	"46.5"	"100.000"	"29.6065"	"6571"	"6571"	"6544"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.9"	""	"62.4"	""	"55.1"	""	"77.7"	""	"87.6"	"101.2"	""	"400"	"1"	"33.000"	"26.000"	"16.0705224437123"	"13"	"0.001217"	"0.01831"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSKDPNIVIAK"	"[K].lSkDPNIVIAk.[M]"	"N-Term(TMT6plex); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.07385"	"1885.20700"	"1885.20895"	"-1.03"	"-0.00065"	"9/100"	"9"	"100"	"8350727.44122314"	"HCD"	"MS2"	"8.473242"	"484.2"	"100.000"	"42.2671"	"11744"	"11744"	"11731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"934.2"	""	"822.5"	""	"833.9"	""	"597.0"	"6.4"	"704.1"	"668.5"	""	"142"	"15"	"28.000"	"21.000"	"0.225558059016134"	"13"	"0.00109"	"0.01487"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSKDPNIVIAK"	"[K].lSkDPNIVIAk.[M]"	"N-Term(TMT6plex); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.07434"	"1885.20847"	"1885.20895"	"-0.25"	"-0.00016"	"10/100"	"10"	"100"	"8028653.5166626"	"HCD"	"MS2"	"0"	"469.2"	"100.000"	"41.9804"	"11584"	"11584"	"11562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"972.1"	""	"817.9"	""	"854.7"	""	"531.7"	"0.9"	"628.3"	"614.3"	""	"145"	"20"	"28.000"	"21.000"	"0.0689188475400804"	"14"	"0"	"0.0001636"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLWPGVEDLSLNK"	"[R].gLWPGVEDLSLNk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5FVN0"	"Lysophospholipid acyltransferase 5 OS=Rattus norvegicus OX=10116 GN=Lpcat3 PE=2 SV=1"	"Q5FVN0"	"Lysophospholipid acyltransferase 5 OS=Rattus norvegicus OX=10116 GN=Lpcat3 PE=2 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"629.36432"	"1886.07840"	"1886.07877"	"-0.19"	"-0.00012"	"11/104"	"11"	"104"	"2923998.65673828"	"HCD"	"MS2"	"44.07715"	"95.1"	"100.000"	"70.6627"	"23297"	"23297"	"23274"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.1"	""	"112.6"	""	"128.6"	""	"172.7"	"0.8"	"177.9"	"189.0"	""	"947"	"34"	"36.000"	"29.000"	"0.017551732176405"	"16"	"0.0001889"	"0.0004805"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGLAIESQDAGIK"	"[R].iLGLAIESQDAGIk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O70377"	"Synaptosomal-associated protein 23 OS=Rattus norvegicus OX=10116 GN=Snap23 PE=1 SV=1"	"O70377"	"Synaptosomal-associated protein 23 OS=Rattus norvegicus OX=10116 GN=Snap23 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"943.57227"	"1886.13725"	"1886.13628"	"0.51"	"0.00049"	"5/120"	"5"	"120"	"128006.042236328"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"66.2730"	"21462"	"21462"	"21433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"11.4"	""	"12.4"	""	"22.0"	""	"26.1"	"25.2"	""	"485"	"12"	"33.000"	"26.000"	"1.42466167988471"	"17"	"0.000523"	"0.003024"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDTTFSPNTGK"	"[K].lTFDTTFSPNTGk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.9825"	"0.0000"	"1"	"1"	"1"	"944.01569"	"1887.02410"	"1887.02640"	"-1.22"	"-0.00115"	"17/120"	"17"	"120"	"567150.059082031"	"HCD"	"MS2"	"0"	"54.6"	"100.000"	"56.0189"	"17332"	"17332"	"17301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.7"	""	"89.3"	""	"82.9"	""	"76.5"	"0.9"	"96.6"	"107.0"	""	"1141"	"57"	"37.000"	"30.000"	"0.000106476961362118"	"17"	"0"	"6.945E-06"	"1.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDTTFSPNTGK"	"[K].lTFDTTFSPNTGk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"629.68011"	"1887.02579"	"1887.02640"	"-0.32"	"-0.00020"	"12/120"	"12"	"120"	"3597218.74768066"	"HCD"	"MS2"	"33.51344"	"111.7"	"100.000"	"55.7231"	"17157"	"17157"	"17131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.0"	""	"157.5"	""	"166.3"	""	"199.1"	""	"198.7"	"213.8"	""	"1153"	"40"	"37.000"	"30.000"	"0.00610659772564707"	"17"	"0"	"0.0001546"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDTTFSPNTGK"	"[K].lTFDTTFSPNTGk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.68024"	"1887.02616"	"1887.02640"	"-0.13"	"-0.00008"	"15/120"	"15"	"120"	"4467616.54333496"	"HCD"	"MS2"	"21.83578"	"135.0"	"100.000"	"55.9615"	"17308"	"17308"	"17285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.1"	""	"194.8"	""	"203.0"	""	"230.3"	""	"237.7"	"260.9"	""	"1150"	"30"	"37.000"	"30.000"	"0.0621824521996314"	"14"	"0.0001308"	"0.0002709"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDTTFSPNTGK"	"[K].lTFDTTFSPNTGk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.9841"	"0.0000"	"1"	"1"	"1"	"944.01727"	"1887.02727"	"1887.02640"	"0.46"	"0.00043"	"17/120"	"17"	"120"	"571018.033447266"	"HCD"	"MS2"	"0"	"54.6"	"100.000"	"55.8128"	"17194"	"17194"	"17163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.7"	""	"84.3"	""	"78.2"	""	"88.2"	""	"93.3"	"108.2"	""	"1171"	"63"	"37.000"	"30.000"	"2.78950342774571E-05"	"17"	"0"	"1.046E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLIVEDIIDTGK"	"[K].nVLIVEDIIDTGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"944.06146"	"1887.11565"	"1887.12030"	"-2.47"	"-0.00233"	"11/130"	"11"	"130"	"127243.384338379"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"75.4312"	"25244"	"25244"	"25215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.7"	""	"12.7"	""	"12.8"	""	"14.8"	""	"14.6"	"16.8"	""	"675"	"38"	"35.000"	"28.000"	"0.00531219216757348"	"16"	"0.0001308"	"0.0002705"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLIVEDIIDTGK"	"[K].nVLIVEDIIDTGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.71069"	"1887.11753"	"1887.12030"	"-1.47"	"-0.00092"	"12/130"	"12"	"130"	"2223563.62261963"	"HCD"	"MS2"	"60.63039"	"102.4"	"100.000"	"75.4779"	"25211"	"25211"	"25185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.6"	""	"133.3"	""	"153.7"	""	"163.3"	"0.1"	"200.3"	"199.7"	""	"658"	"8"	"35.000"	"28.000"	"5.79690119269426"	"13"	"0.0001889"	"0.0003965"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLIVEDIIDTGK"	"[K].nVLIVEDIIDTGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"944.06299"	"1887.11870"	"1887.12030"	"-0.85"	"-0.00080"	"9/130"	"9"	"130"	"117842.121520996"	"HCD"	"MS2"	"100"	"8.2"	"100.000"	"75.5194"	"25228"	"25228"	"25201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.1"	""	"8.8"	""	"12.7"	""	"16.1"	""	"17.4"	"16.5"	""	"651"	"18"	"35.000"	"28.000"	"0.515882734146093"	"14"	"0.0001889"	"0.0008154"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMGEDSYPYIGK"	"[K].gIMGEDSYPYIGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"944.49854"	"1887.98979"	"1887.99266"	"-1.52"	"-0.00143"	"14/100"	"14"	"100"	"623366.880981445"	"HCD"	"MS2"	"0"	"60.4"	"100.000"	"53.9217"	"16421"	"16421"	"16403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.1"	""	"77.3"	""	"89.2"	""	"100.1"	"0.1"	"104.1"	"113.6"	""	"1160"	"30"	"37.000"	"30.000"	"0.0562895781002384"	"14"	"0"	"0.0001191"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMGEDSYPYIGK"	"[K].gIMGEDSYPYIGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.00146"	"1887.98984"	"1887.99266"	"-1.49"	"-0.00094"	"13/100"	"13"	"100"	"3818592.43200684"	"HCD"	"MS2"	"0"	"131.5"	"100.000"	"53.8851"	"16406"	"16406"	"16395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.0"	""	"178.3"	""	"194.8"	""	"187.8"	""	"233.9"	"264.1"	""	"1159"	"32"	"37.000"	"30.000"	"0.0387305300231012"	"14"	"0.0001889"	"0.0006207"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMGEDSYPYIGK"	"[K].gIMGEDSYPYIGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.00177"	"1887.99076"	"1887.99266"	"-1.01"	"-0.00063"	"13/100"	"13"	"100"	"4468210.74615479"	"HCD"	"MS2"	"0"	"139.3"	"100.000"	"54.1509"	"16567"	"16567"	"16555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.1"	""	"190.3"	""	"210.4"	""	"205.7"	"1.8"	"254.4"	"251.8"	""	"1154"	"46"	"37.000"	"30.000"	"0.00144602503899953"	"15"	"0"	"8.204E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMGEDSYPYIGK"	"[K].gIMGEDSYPYIGk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"944.50000"	"1887.99272"	"1887.99266"	"0.04"	"0.00003"	"19/100"	"19"	"100"	"922401.724243164"	"HCD"	"MS2"	"0"	"84.8"	"100.000"	"54.1279"	"16558"	"16558"	"16541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.7"	""	"114.7"	""	"129.2"	""	"134.1"	"2.1"	"144.2"	"152.5"	""	"1158"	"58"	"37.000"	"30.000"	"8.74336409261041E-05"	"16"	"0"	"7.754E-06"	"1.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVENLPTFLVELSR"	"[R].aAVENLPTFLVELSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"944.53979"	"1888.07231"	"1888.07413"	"-0.96"	"-0.00091"	"13/152"	"13"	"152"	"584821.110839844"	"HCD"	"MS2"	"0"	"25.9"	"100.000"	"83.4746"	"28462"	"28462"	"28444"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.0"	""	"22.7"	""	"35.2"	""	"47.9"	"0.9"	"52.0"	"51.3"	""	"972"	"56"	"36.000"	"29.000"	"0.000113929520424548"	""	"0"	"9.908E-06"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVENLPTFLVELSR"	"[R].aAVENLPTFLVELSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"630.02924"	"1888.07315"	"1888.07413"	"-0.52"	"-0.00032"	"13/152"	"13"	"152"	"2461952.7711792"	"HCD"	"MS2"	"10.78483"	"27.1"	"100.000"	"83.2739"	"28431"	"28431"	"28413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.0"	""	"32.6"	""	"34.5"	""	"44.4"	""	"49.0"	"53.8"	""	"974"	"55"	"36.000"	"29.000"	"0.00017042329634281"	"26"	"0"	"7.862E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVENLPTFLVELSR"	"[R].aAVENLPTFLVELSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"944.54028"	"1888.07329"	"1888.07413"	"-0.44"	"-0.00042"	"12/152"	"12"	"152"	"793740.337158203"	"HCD"	"MS2"	"0"	"37.0"	"100.000"	"83.4604"	"28508"	"28508"	"28491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.8"	""	"42.0"	""	"49.4"	""	"57.8"	""	"77.0"	"74.8"	""	"974"	"42"	"36.000"	"29.000"	"0.00284792770978362"	"25"	"0"	"6.928E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVENLPTFLVELSR"	"[R].aAVENLPTFLVELSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"630.02936"	"1888.07352"	"1888.07413"	"-0.32"	"-0.00020"	"13/152"	"13"	"152"	"1142134.82836914"	"HCD"	"MS2"	"5.13842"	"22.2"	"100.000"	"83.5779"	"28556"	"28556"	"28539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.6"	""	"35.9"	""	"32.7"	""	"41.1"	"0.7"	"37.3"	"33.8"	""	"974"	"37"	"36.000"	"29.000"	"0.00890284805261516"	"23"	"0"	"0.0001224"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVENLPTFLVELSR"	"[R].aAVENLPTFLVELSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"944.54053"	"1888.07378"	"1888.07413"	"-0.19"	"-0.00018"	"11/152"	"11"	"152"	"406088.949401855"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"83.1872"	"28345"	"28345"	"28319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.2"	""	"19.3"	""	"20.6"	""	"32.5"	""	"42.5"	"44.7"	""	"972"	"42"	"36.000"	"29.000"	"0.00318886599423212"	"24"	"0"	"5.627E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVENLPTFLVELSR"	"[R].aAVENLPTFLVELSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"630.02948"	"1888.07389"	"1888.07413"	"-0.13"	"-0.00008"	"14/152"	"14"	"152"	"1043844.10345459"	"HCD"	"MS2"	"30.97682"	"21.4"	"100.000"	"83.1480"	"28329"	"28329"	"28303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.5"	""	"29.7"	""	"24.4"	""	"37.2"	"0.8"	"42.4"	"39.2"	""	"968"	"48"	"36.000"	"29.000"	"0.000858707708750841"	"24"	"0"	"1.878E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVENLPTFLVELSR"	"[R].aAVENLPTFLVELSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"944.54071"	"1888.07414"	"1888.07413"	"0.01"	"0.00001"	"7/152"	"7"	"152"	"216612.369628906"	"HCD"	"MS2"	"19.26138"	"11.4"	"100.000"	"83.1796"	"28393"	"28393"	"28365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.2"	""	"13.0"	""	"15.5"	""	"20.6"	""	"23.3"	"19.7"	""	"958"	"35"	"36.000"	"29.000"	"0.0140066898898696"	"27"	"0.0001308"	"0.0002261"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVENLPTFLVELSR"	"[R].aAVENLPTFLVELSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7679"	"0.0000"	"1"	"1"	"1"	"630.02997"	"1888.07535"	"1888.07413"	"0.65"	"0.00041"	"13/152"	"13"	"152"	"2756269.28979492"	"HCD"	"MS2"	"6.248662"	"30.0"	"100.000"	"83.4355"	"28446"	"28446"	"28430"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.6"	""	"46.1"	""	"42.4"	""	"41.9"	""	"57.5"	"51.5"	""	"961"	"56"	"36.000"	"29.000"	"0.000108067073810409"	"29"	"0"	"9.874E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"0.9778"	"0.0000"	"1"	"1"	"1"	"472.78732"	"1888.12746"	"1888.13081"	"-1.77"	"-0.00084"	"13/114"	"13"	"114"	"3505775.33514404"	"HCD"	"MS2"	"0"	"85.8"	"100.000"	"70.8331"	"23367"	"23367"	"23338"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.0"	""	"137.7"	""	"95.0"	""	"139.7"	""	"126.5"	"137.8"	""	"588"	"45"	"34.000"	"27.000"	"0.000975769705204674"	"16"	"0"	"2.983E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"630.04749"	"1888.12790"	"1888.13081"	"-1.54"	"-0.00097"	"9/114"	"9"	"114"	"12751277.6452026"	"HCD"	"MS2"	"15.87615"	"311.5"	"100.000"	"70.7317"	"23325"	"23325"	"23306"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"567.5"	""	"494.3"	""	"363.8"	""	"555.8"	""	"485.0"	"477.8"	""	"590"	"50"	"34.000"	"27.000"	"0.000311761165218029"	"18"	"0"	"3.514E-05"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"944.56836"	"1888.12944"	"1888.13081"	"-0.72"	"-0.00068"	"11/114"	"11"	"114"	"3147532.09716797"	"HCD"	"MS2"	"0"	"181.6"	"100.000"	"71.0059"	"23437"	"23437"	"23418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"363.9"	""	"273.7"	""	"192.1"	""	"317.7"	"0.7"	"268.4"	"298.8"	""	"570"	"55"	"34.000"	"27.000"	"9.70163340647853E-05"	"27"	"0"	"1.086E-05"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"630.04810"	"1888.12973"	"1888.13081"	"-0.57"	"-0.00036"	"9/114"	"9"	"114"	"9814203.67840576"	"HCD"	"MS2"	"30.51442"	"225.5"	"100.000"	"70.8022"	"23302"	"23302"	"23283"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.1"	""	"339.1"	""	"248.7"	""	"399.6"	""	"351.2"	"358.5"	""	"565"	"50"	"34.000"	"27.000"	"0.000254108066782235"	"19"	"0"	"4.697E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"944.56854"	"1888.12981"	"1888.13081"	"-0.53"	"-0.00050"	"8/114"	"8"	"114"	"1954151.27392578"	"HCD"	"MS2"	"9.874201"	"129.3"	"100.000"	"70.8254"	"23312"	"23312"	"23283"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"248.5"	""	"201.3"	""	"140.1"	""	"233.3"	""	"205.3"	"193.9"	""	"565"	"46"	"34.000"	"27.000"	"0.000787079230137912"	"22"	"0"	"1.865E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"944.56873"	"1888.13017"	"1888.13081"	"-0.33"	"-0.00032"	"7/114"	"7"	"114"	"1391944.31646729"	"HCD"	"MS2"	"17.25795"	"90.1"	"100.000"	"70.7179"	"23320"	"23320"	"23290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.1"	""	"139.7"	""	"95.2"	""	"158.8"	""	"154.6"	"138.7"	""	"565"	"50"	"34.000"	"27.000"	"0.000264861266956561"	"25"	"0"	"4.559E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"944.56879"	"1888.13030"	"1888.13081"	"-0.27"	"-0.00025"	"9/114"	"9"	"114"	"145482.554504395"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"71.4868"	"23582"	"23582"	"23555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.4"	""	"12.9"	""	"12.3"	""	"21.8"	""	"20.8"	"25.8"	""	"565"	"26"	"34.000"	"27.000"	"0.0744763616495671"	"14"	"0.0006037"	"0.004104"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"630.04834"	"1888.13047"	"1888.13081"	"-0.18"	"-0.00011"	"9/114"	"9"	"114"	"29234183.885498"	"HCD"	"MS2"	"4.446984"	"124.6"	"18.660"	"71.0384"	"23451"	"23451"	"23434"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.2"	""	"178.9"	""	"134.6"	""	"214.0"	""	"191.3"	"210.2"	""	"561"	"52"	"34.000"	"27.000"	"0.000164033618602527"	"22"	"0"	"4.702E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"0.9783"	"0.0000"	"1"	"1"	"1"	"472.78809"	"1888.13051"	"1888.13081"	"-0.15"	"-0.00007"	"13/114"	"13"	"114"	"3612445.44897461"	"HCD"	"MS2"	"13.79733"	"93.2"	"100.000"	"70.9407"	"23359"	"23359"	"23331"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.1"	""	"151.9"	""	"111.2"	""	"152.9"	"1.6"	"142.0"	"149.3"	""	"559"	"46"	"34.000"	"27.000"	"0.000634427226101529"	"16"	"0"	"4.431E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"944.56891"	"1888.13054"	"1888.13081"	"-0.14"	"-0.00013"	"15/114"	"15"	"114"	"2644851.40771484"	"HCD"	"MS2"	"0"	"159.0"	"100.000"	"71.1136"	"23429"	"23429"	"23411"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"299.0"	""	"248.0"	""	"176.8"	""	"271.0"	""	"248.3"	"263.8"	""	"559"	"38"	"34.000"	"27.000"	"0.00431898615850987"	"19"	"0"	"1.816E-05"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDNNLLPVGk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"630.04932"	"1888.13340"	"1888.13081"	"1.37"	"0.00086"	"9/114"	"9"	"114"	"28540239.3637695"	"HCD"	"MS2"	"4.508428"	"117.0"	"17.882"	"71.1092"	"23428"	"23428"	"23411"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.5"	""	"181.9"	""	"124.7"	""	"209.8"	"1.0"	"176.7"	"189.8"	""	"546"	"54"	"34.000"	"27.000"	"0.000108683257561105"	"22"	"0"	"6.238E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVASSQPAKPTK"	"[R].sVASSQPAkPTk.[V]"	"N-Term(TMT6plex); K9(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.05389"	"1888.14713"	"1888.14707"	"0.03"	"0.00002"	"9/120"	"9"	"120"	"3710334.38244629"	"HCD"	"MS2"	"9.32353"	"223.2"	"100.000"	"28.0367"	"5966"	"5966"	"5937"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"272.9"	""	"296.8"	""	"289.7"	""	"369.9"	""	"430.3"	"459.2"	""	"487"	"30"	"33.000"	"26.000"	"0.0224646142512185"	"15"	"0"	"6.038E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYGPSSVSFADDFVR"	"[R].lYGPSSVSFADDFVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"944.98529"	"1888.96330"	"1888.96424"	"-0.50"	"-0.00047"	"10/126"	"10"	"126"	"239134.323791504"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"65.9373"	"21378"	"21378"	"21347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.4"	""	"16.1"	""	"26.9"	""	"22.5"	""	"23.1"	"24.4"	""	"1035"	"24"	"37.000"	"30.000"	"0.1865994477637"	"19"	"0.000494"	"0.00273"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSSFLTEDLFK"	"[R].mLSSFLTEDLFk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"945.02722"	"1889.04717"	"1889.04944"	"-1.21"	"-0.00114"	"5/100"	"5"	"100"	"97391.1951293945"	"HCD"	"MS2"	"14.14384"	"8.0"	"100.000"	"88.5176"	"30524"	"30524"	"30507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"11.4"	""	"12.1"	""	"12.0"	""	"16.1"	"15.4"	""	"1153"	"8"	"37.000"	"30.000"	"8.19972545776305"	"13"	"0.002393"	"0.03528"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSSFLTEDLFK"	"[R].mLSSFLTEDLFk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"945.02826"	"1889.04924"	"1889.04944"	"-0.11"	"-0.00010"	"4/100"	"4"	"100"	"96610.8906860352"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"88.3704"	"30426"	"30426"	"30409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.4"	""	"13.2"	""	"13.3"	""	"13.4"	""	"14.0"	"17.0"	""	"1154"	"11"	"37.000"	"30.000"	"4.1799954896327"	"13"	"0.0008731"	"0.009529"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPLAMAPVFEQK"	"[K].sIPLAMAPVFEQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.37054"	"1889.09708"	"1889.09706"	"0.01"	"0.00001"	"12/118"	"12"	"118"	"2870168.08673096"	"HCD"	"MS2"	"50.38423"	"72.3"	"100.000"	"68.7640"	"22471"	"22471"	"22442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.7"	""	"85.6"	""	"94.5"	""	"120.5"	""	"135.6"	"144.4"	""	"888"	"10"	"36.000"	"29.000"	"4.13411896707716"	"14"	"0.0003839"	"0.001682"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDnNLLPVGk.[T]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.2239"	"0.0000"	"1"	"1"	"1"	"945.05927"	"1889.11125"	"1889.11482"	"-1.89"	"-0.00178"	"17/114"	"17"	"114"	"321054.28894043"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"73.1132"	"24298"	"24298"	"24271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.5"	""	"34.9"	""	"20.3"	""	"40.8"	""	"32.0"	"32.7"	""	"805"	"67"	"36.000"	"29.000"	"7.6518400766913E-06"	"25"	"0"	"8.193E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTVDNNLLPVGK"	"[R].iFTVDnNLLPVGk.[T]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.2586"	"0.0000"	"1"	"1"	"1"	"945.06079"	"1889.11431"	"1889.11482"	"-0.27"	"-0.00026"	"9/114"	"9"	"114"	"344089.118530273"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"73.1314"	"24254"	"24254"	"24225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.5"	""	"33.8"	""	"27.7"	""	"48.3"	""	"37.5"	"34.1"	""	"755"	"58"	"35.000"	"28.000"	"6.4851041615199E-05"	"27"	"0"	"5.111E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSKPGAVSTPVK"	"[R].mSkPGAVSTPVk.[H]"	"N-Term(TMT6plex); K3(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.5500"	"0.0000"	"1"	"1"	"1"	"630.38678"	"1889.14579"	"1889.14972"	"-2.08"	"-0.00131"	"14/120"	"14"	"120"	"4532371.8605957"	"HCD"	"MS2"	"24.39385"	"303.9"	"100.000"	"33.8571"	"8261"	"8261"	"8234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"520.2"	""	"469.4"	""	"426.0"	""	"323.6"	"1.5"	"523.7"	"612.1"	""	"572"	"20"	"34.000"	"27.000"	"0.300169134594564"	"22"	"0"	"0.0001624"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSKPGAVSTPVK"	"[R].mSkPGAVSTPVk.[H]"	"N-Term(TMT6plex); K3(TMT6plex); K12(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.5238"	"0.0000"	"1"	"1"	"1"	"630.38733"	"1889.14743"	"1889.14972"	"-1.21"	"-0.00076"	"16/120"	"16"	"120"	"3433529.51226807"	"HCD"	"MS2"	"11.62514"	"247.6"	"100.000"	"33.9098"	"8326"	"8326"	"8298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"423.6"	""	"352.9"	""	"363.6"	""	"290.5"	"5.0"	"407.9"	"499.4"	""	"549"	"21"	"34.000"	"27.000"	"0.205372527890312"	"24"	"7.476E-05"	"0.0001943"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSPLMEPSSIEK"	"[R].iTSPLMEPSSIEk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"630.69250"	"1890.06296"	"1890.06582"	"-1.51"	"-0.00095"	"11/116"	"11"	"116"	"1549180.11773682"	"HCD"	"MS2"	"39.48052"	"78.2"	"100.000"	"53.6148"	"16300"	"16300"	"16286"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.5"	""	"98.2"	""	"115.7"	""	"113.1"	"1.0"	"153.5"	"164.0"	""	"1093"	"41"	"37.000"	"30.000"	"0.00390472242200268"	"22"	"0"	"0.0001145"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEPGLNVLIPVLDR"	"[R].iLEPGLNVLIPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"945.58380"	"1890.16033"	"1890.16255"	"-1.18"	"-0.00111"	"9/150"	"9"	"150"	"143940.481140137"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"90.9237"	"31400"	"31400"	"31393"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.4"	""	"4.6"	""	"9.3"	""	"10.4"	""	"9.3"	"9.3"	""	"388"	"16"	"32.000"	"25.000"	"0.470762358445988"	"15"	"0.0008731"	"0.009137"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEPGLNVLIPVLDR"	"[R].iLEPGLNVLIPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.72534"	"1890.16147"	"1890.16255"	"-0.57"	"-0.00036"	"11/150"	"11"	"150"	"231994.872741699"	"HCD"	"MS2"	"39.19265"	"6.2"	"100.000"	"90.6844"	"31313"	"31313"	"31309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.7"	""	"7.3"	""	"10.8"	""	"11.4"	""	"11.6"	"7.8"	""	"387"	"43"	"32.000"	"25.000"	"0.00101316684479343"	"15"	"0.0001889"	"0.0004419"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEPGLNVLIPVLDR"	"[R].iLEPGLNVLIPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"0"	"3"	"3"	"0.9821"	"0.0000"	"1"	"1"	"1"	"630.72534"	"1890.16147"	"1890.16255"	"-0.57"	"-0.00036"	"14/150"	"14"	"150"	"456491.542724609"	"HCD"	"MS2"	"11.22531"	"7.9"	"100.000"	"90.8274"	"31336"	"31336"	"31329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.0"	""	"12.5"	""	"9.0"	""	"14.1"	""	"12.8"	"14.0"	""	"387"	"56"	"32.000"	"25.000"	"5.08956856431756E-05"	"17"	"0"	"4.388E-06"	"1.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEPGLNVLIPVLDR"	"[R].iLEPGLNVLIPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.72546"	"1890.16184"	"1890.16255"	"-0.38"	"-0.00024"	"13/150"	"13"	"150"	"257217.103515625"	"HCD"	"MS2"	"58.67303"	"5.8"	"100.000"	"90.5596"	"31244"	"31244"	"31236"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.7"	""	"8.9"	""	"8.2"	""	"9.5"	""	"8.4"	"7.9"	""	"387"	"53"	"32.000"	"25.000"	"8.76356817113506E-05"	"16"	"0"	"4.047E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEPGLNVLIPVLDR"	"[R].iLEPGLNVLIPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.72559"	"1890.16220"	"1890.16255"	"-0.18"	"-0.00012"	"13/150"	"13"	"150"	"414930.823303223"	"HCD"	"MS2"	"11.92737"	"6.6"	"100.000"	"90.9490"	"31408"	"31408"	"31404"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.8"	""	"9.2"	""	"6.7"	""	"13.0"	""	"9.0"	"11.9"	""	"387"	"35"	"32.000"	"25.000"	"0.00554218437176923"	"15"	"0"	"0.0001091"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEPGLNVLIPVLDR"	"[R].iLEPGLNVLIPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"945.58478"	"1890.16228"	"1890.16255"	"-0.14"	"-0.00014"	"5/150"	"5"	"150"	"117214.66607666"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"90.5337"	"31235"	"31235"	"31229"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	"4.2"	""	"5.7"	""	"6.2"	""	"3.9"	"5.6"	""	"387"	"15"	"32.000"	"25.000"	"0.613311304098915"	"13"	"0.001389"	"0.01919"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEPGLNVLIPVLDR"	"[R].iLEPGLNVLIPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"Q4FZT0"	"Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Stoml2 PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"945.58508"	"1890.16289"	"1890.16255"	"0.18"	"0.00017"	"6/150"	"6"	"150"	"117449.442382813"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"90.7994"	"31327"	"31327"	"31318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.1"	""	"4.7"	""	"8.8"	""	"10.3"	""	"11.2"	"10.6"	""	"376"	"31"	"32.000"	"25.000"	"0.0162988832642545"	"19"	"0.0004166"	"0.002239"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIQGFFNIPVDNLR"	"[K].eIQGFFNIPVDNLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08618"	"Phosphoribosyl pyrophosphate synthase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Prpsap2 PE=1 SV=1"	"O08618"	"Phosphoribosyl pyrophosphate synthase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Prpsap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"946.01733"	"1891.02739"	"1891.02751"	"-0.06"	"-0.00006"	"12/146"	"12"	"146"	"254588.314453125"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"74.4302"	"24784"	"24784"	"24753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.4"	""	"22.7"	""	"26.3"	""	"24.8"	""	"31.9"	"23.7"	""	"1255"	"36"	"37.000"	"30.000"	"0.0144415474042384"	"21"	"0"	"0.0001248"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIQGFFNIPVDNLR"	"[K].eIQGFFNIPVDNLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08618"	"Phosphoribosyl pyrophosphate synthase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Prpsap2 PE=1 SV=1"	"O08618"	"Phosphoribosyl pyrophosphate synthase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Prpsap2 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"946.01929"	"1891.03130"	"1891.02751"	"2.00"	"0.00189"	"6/146"	"6"	"146"	"255302.592712402"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"74.4045"	"24825"	"24825"	"24799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.9"	""	"17.1"	""	"22.0"	""	"26.1"	""	"25.0"	"31.4"	""	"1236"	"28"	"37.000"	"30.000"	"0.0959375172154095"	"24"	"0.0004166"	"0.002247"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMVLDFVTPTPLGTR"	"[K].vmVLDFVTPTPLGTR.[W]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"946.03235"	"1891.05742"	"1891.05604"	"0.73"	"0.00069"	"10/130"	"10"	"130"	"214532.710632324"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"71.3303"	"23518"	"23518"	"23491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.2"	""	"18.5"	""	"18.6"	""	"27.8"	""	"26.3"	"22.7"	""	"1116"	"17"	"37.000"	"30.000"	"1.06324708062349"	"15"	"0.002132"	"0.03225"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANEITPITISVK"	"[K].fANEITPITISVk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"946.06757"	"1891.12786"	"1891.13047"	"-1.38"	"-0.00131"	"15/130"	"15"	"130"	"892317.414123535"	"HCD"	"MS2"	"0"	"62.1"	"100.000"	"65.1931"	"21074"	"21074"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.1"	""	"72.4"	""	"60.5"	""	"116.3"	""	"120.8"	"133.5"	""	"631"	"53"	"34.000"	"28.000"	"0.000155955021744347"	"25"	"0.0001308"	"0.0002409"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANEITPITISVK"	"[K].fANEITPITISVk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"631.04767"	"1891.12845"	"1891.13047"	"-1.07"	"-0.00067"	"15/130"	"15"	"130"	"5794349.97515869"	"HCD"	"MS2"	"15.8016"	"143.1"	"100.000"	"65.1032"	"21037"	"21037"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"190.1"	""	"156.0"	""	"171.3"	""	"270.5"	"4.1"	"282.8"	"283.4"	""	"628"	"51"	"34.000"	"27.000"	"0.000234925223160502"	""	"0"	"4.607E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVATTLSNPELFK"	"[R].iVATTLSNPELFk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"3"	"3"	"0.3077"	"0.0000"	"1"	"1"	"1"	"631.04773"	"1891.12864"	"1891.13047"	"-0.97"	"-0.00061"	"12/118"	"12"	"118"	"1959721.87994385"	"HCD"	"MS2"	"17.23726"	"74.7"	"100.000"	"65.0514"	"20963"	"20963"	"20937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.2"	""	"99.1"	""	"109.1"	""	"121.7"	""	"132.6"	"136.2"	""	"628"	"26"	"34.000"	"27.000"	"0.0761955569855878"	""	"0.0001889"	"0.0003935"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANEITPITISVK"	"[K].fANEITPITISVk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"946.06836"	"1891.12944"	"1891.13047"	"-0.54"	"-0.00051"	"14/130"	"14"	"130"	"699508.129150391"	"HCD"	"MS2"	"0"	"52.4"	"100.000"	"65.1736"	"21013"	"21013"	"20985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.9"	""	"58.0"	""	"63.2"	""	"93.0"	""	"95.8"	"115.1"	""	"624"	"53"	"34.000"	"27.000"	"0.000163739927597929"	""	"0"	"8.013E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVATTLSNPELFK"	"[R].iVATTLSNPELFk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"946.06848"	"1891.12969"	"1891.13047"	"-0.41"	"-0.00039"	"17/118"	"17"	"118"	"1299089.56933594"	"HCD"	"MS2"	"0"	"89.7"	"100.000"	"64.7460"	"20891"	"20891"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.0"	""	"134.5"	""	"128.0"	""	"121.3"	""	"141.1"	"170.9"	""	"624"	"48"	"34.000"	"27.000"	"0.000544696511711197"	"18"	"0"	"9.053E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANEITPITISVK"	"[K].fANEITPITISVk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"3"	"3"	"0.7111"	"0.0000"	"1"	"1"	"1"	"631.04834"	"1891.13047"	"1891.13047"	"0.00"	"0.00000"	"14/130"	"14"	"130"	"6568218.87347412"	"HCD"	"MS2"	"9.438978"	"183.3"	"100.000"	"65.3486"	"21084"	"21084"	"21065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.7"	""	"208.9"	""	"215.6"	""	"306.1"	"4.2"	"371.5"	"399.7"	""	"619"	"45"	"34.000"	"27.000"	"0.00106086629936126"	""	"0"	"5.498E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVATTLSNPELFK"	"[R].iVATTLSNPELFk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"3"	"3"	"0.7073"	"0.0000"	"1"	"1"	"1"	"631.04858"	"1891.13120"	"1891.13047"	"0.38"	"0.00024"	"12/118"	"12"	"118"	"4681105.74987793"	"HCD"	"MS2"	"22.71747"	"132.2"	"100.000"	"64.6653"	"20858"	"20858"	"20835"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.5"	""	"190.5"	""	"195.3"	""	"204.4"	""	"225.8"	"243.8"	""	"619"	"41"	"34.000"	"27.000"	"0.00262216884676515"	"27"	"0"	"0.0001224"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVATTLSNPELFK"	"[R].iVATTLSNPELFk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"631.04871"	"1891.13156"	"1891.13047"	"0.58"	"0.00036"	"12/118"	"12"	"118"	"5637322.20037842"	"HCD"	"MS2"	"5.049094"	"155.0"	"100.000"	"64.7245"	"20829"	"20829"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"253.5"	""	"217.9"	""	"236.9"	""	"231.4"	""	"231.1"	"297.9"	""	"621"	"40"	"34.000"	"27.000"	"0.00324385628068058"	"23"	"0"	"9.636E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVATTLSNPELFK"	"[R].iVATTLSNPELFk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"2"	"2"	"0.9579"	"0.0000"	"1"	"1"	"1"	"946.06964"	"1891.13201"	"1891.13047"	"0.81"	"0.00077"	"11/118"	"11"	"118"	"969505.684997559"	"HCD"	"MS2"	"0"	"68.6"	"100.000"	"64.7448"	"20838"	"20838"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.2"	""	"96.1"	""	"97.2"	""	"94.2"	"1.1"	"110.1"	"126.8"	""	"608"	"95"	"34.000"	"27.000"	"1.01595292167939E-08"	"23"	"0"	"5.319E-07"	"1.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.2941"	"0.0000"	"1"	"1"	"1"	"473.54147"	"1891.14406"	"1891.14674"	"-1.41"	"-0.00067"	"5/98"	"5"	"98"	"234149069.190918"	"HCD"	"MS2"	"12.70581"	"649.6"	"7.420"	"36.5075"	"9387"	"9387"	"9369"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1284.4"	""	"827.2"	""	"902.5"	""	"1166.9"	"6.9"	"924.0"	"1019.4"	""	"506"	"17"	"34.000"	"27.000"	"0.550960572405349"	"25"	"0.0008731"	"0.009431"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.3529"	"0.0000"	"1"	"1"	"1"	"473.54172"	"1891.14504"	"1891.14674"	"-0.90"	"-0.00042"	"9/98"	"9"	"98"	"153313501.76416"	"HCD"	"MS2"	"34.4987"	"801.3"	"14.707"	"36.3815"	"9292"	"9292"	"9274"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1513.6"	""	"1054.3"	""	"1118.5"	""	"1489.7"	"5.5"	"1138.7"	"1243.7"	""	"495"	"17"	"33.000"	"26.000"	"0.550269197936222"	"24"	"0.001007"	"0.01085"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.05322"	"1891.14511"	"1891.14674"	"-0.86"	"-0.00054"	"14/98"	"14"	"98"	"181976053.187256"	"HCD"	"MS2"	"7.358283"	"2606.9"	"18.968"	"36.3382"	"9275"	"9275"	"9258"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5299.4"	""	"3408.2"	""	"3614.2"	""	"4819.7"	""	"3615.1"	"3862.4"	""	"495"	"9"	"33.000"	"26.000"	"3.15192012551624"	"13"	"0.0001889"	"0.0006291"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.05328"	"1891.14530"	"1891.14674"	"-0.76"	"-0.00048"	"11/98"	"11"	"98"	"10518052.8640747"	"HCD"	"MS2"	"6.700551"	"550.9"	"73.640"	"36.9664"	"9532"	"9532"	"9514"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"998.5"	""	"666.8"	""	"793.5"	""	"967.8"	"17.8"	"849.5"	"911.6"	""	"495"	"5"	"33.000"	"26.000"	"8.19549525669412"	"13"	"0.0001889"	"0.0004571"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"946.07635"	"1891.14543"	"1891.14674"	"-0.69"	"-0.00065"	"9/98"	"9"	"98"	"5812357.05914307"	"HCD"	"MS2"	"0"	"488.0"	"100.000"	"36.4044"	"9302"	"9302"	"9274"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1036.9"	""	"582.2"	""	"666.5"	""	"918.1"	"9.7"	"676.4"	"712.9"	""	"500"	"51"	"33.000"	"26.000"	"0.000208900754557812"	""	"0"	"0.0001187"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"946.07648"	"1891.14568"	"1891.14674"	"-0.56"	"-0.00053"	"9/98"	"9"	"98"	"5560849.09094238"	"HCD"	"MS2"	"0"	"452.6"	"100.000"	"36.4938"	"9382"	"9382"	"9353"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"962.7"	""	"587.9"	""	"614.3"	""	"819.2"	"7.0"	"607.7"	"668.9"	""	"499"	"51"	"33.000"	"26.000"	"0.000218811704875337"	""	"0"	"6.831E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.05347"	"1891.14585"	"1891.14674"	"-0.47"	"-0.00030"	"16/98"	"16"	"98"	"128204390.320313"	"HCD"	"MS2"	"5.981991"	"380.9"	"4.503"	"36.7298"	"9479"	"9479"	"9462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"722.4"	""	"511.1"	""	"548.5"	""	"679.1"	"1.4"	"524.3"	"608.2"	""	"499"	"11"	"33.000"	"26.000"	"2.01405140047085"	"13"	"0.0001889"	"0.000573"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.05365"	"1891.14640"	"1891.14674"	"-0.18"	"-0.00011"	"14/98"	"14"	"98"	"98381021.8261719"	"HCD"	"MS2"	"6.928383"	"467.5"	"7.126"	"36.6500"	"9403"	"9403"	"9386"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"884.5"	""	"599.6"	""	"649.7"	""	"824.6"	"0.6"	"701.1"	"755.6"	""	"501"	"8"	"33.000"	"26.000"	"4.29346305530861"	"13"	"0.0001889"	"0.0007647"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"4"	"4"	"0.2667"	"0.0000"	"1"	"1"	"1"	"473.54224"	"1891.14712"	"1891.14674"	"0.20"	"0.00009"	"5/98"	"5"	"98"	"13132832.7790527"	"HCD"	"MS2"	"7.589826"	"305.9"	"58.518"	"36.7095"	"9427"	"9427"	"9402"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"530.1"	""	"382.0"	""	"445.2"	""	"520.2"	"1.7"	"508.8"	"504.3"	""	"471"	"15"	"33.000"	"26.000"	"0.82412086835178"	"24"	"0.0006037"	"0.005989"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWQLQDLSFQTAAR"	"[K].vWQLQDLSFQTAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"631.34576"	"1892.02274"	"1892.02276"	"-0.01"	"-0.00001"	"14/136"	"14"	"136"	"1683681.39892578"	"HCD"	"MS2"	"14.13123"	"37.9"	"100.000"	"67.8079"	"22132"	"22132"	"22106"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.2"	""	"46.7"	""	"50.9"	""	"69.3"	""	"77.2"	"64.2"	""	"1160"	"40"	"37.000"	"30.000"	"0.00557735121462525"	"25"	"0"	"2.052E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWQLQDLSFQTAAR"	"[K].vWQLQDLSFQTAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"631.34747"	"1892.02787"	"1892.02276"	"2.70"	"0.00170"	"14/136"	"14"	"136"	"1525117.7300415"	"HCD"	"MS2"	"23.59327"	"35.2"	"100.000"	"67.9451"	"22137"	"22137"	"22106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.7"	""	"45.5"	""	"51.7"	""	"55.2"	"0.9"	"62.5"	"67.0"	""	"1149"	"29"	"37.000"	"30.000"	"0.0667252228651277"	"16"	"0"	"5.062E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLDTSWPTPPPALR"	"[R].nVLDTSWPTPPPALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"947.02228"	"1893.03728"	"1893.04316"	"-3.11"	"-0.00294"	"10/150"	"10"	"150"	"335240.062438965"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"62.5477"	"19993"	"19993"	"19971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.4"	""	"22.0"	""	"27.3"	""	"25.8"	""	"33.5"	"35.5"	""	"1116"	"16"	"37.000"	"30.000"	"1.57265767564556"	"13"	"0.000523"	"0.003198"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLDTSWPTPPPALR"	"[R].nVLDTSWPTPPPALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"947.02496"	"1893.04265"	"1893.04316"	"-0.27"	"-0.00026"	"16/150"	"16"	"150"	"316842.574523926"	"HCD"	"MS2"	"15.14761"	"17.9"	"100.000"	"62.3992"	"19880"	"19880"	"19849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.9"	""	"25.4"	""	"19.3"	""	"28.2"	""	"33.0"	"40.4"	""	"1140"	"29"	"37.000"	"30.000"	"0.0722561563538972"	"14"	"0"	"0.0001448"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLDTSWPTPPPALR"	"[R].nVLDTSWPTPPPALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.68591"	"1893.04319"	"1893.04316"	"0.01"	"0.00001"	"11/150"	"11"	"150"	"3638184.17230225"	"HCD"	"MS2"	"19.13878"	"63.5"	"100.000"	"62.2979"	"19838"	"19838"	"19817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.8"	""	"86.2"	""	"84.1"	""	"92.9"	"0.4"	"118.1"	"131.3"	""	"1137"	"23"	"37.000"	"30.000"	"0.271475392074397"	"14"	"0"	"8.824E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLDTSWPTPPPALR"	"[R].nVLDTSWPTPPPALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"947.02527"	"1893.04326"	"1893.04316"	"0.05"	"0.00005"	"11/150"	"11"	"150"	"1097722.01202393"	"HCD"	"MS2"	"29.16735"	"68.2"	"100.000"	"62.0470"	"19736"	"19736"	"19705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.2"	""	"94.0"	""	"78.6"	""	"99.9"	"3.8"	"146.5"	"139.7"	""	"1133"	"34"	"37.000"	"30.000"	"0.0250149658425652"	"15"	"0"	"1.197E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLDTSWPTPPPALR"	"[R].nVLDTSWPTPPPALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.68646"	"1893.04483"	"1893.04316"	"0.88"	"0.00056"	"11/150"	"11"	"150"	"3586137.62078857"	"HCD"	"MS2"	"14.13182"	"64.7"	"100.000"	"62.4277"	"19944"	"19944"	"19923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.9"	""	"85.9"	""	"89.7"	""	"92.9"	"0.3"	"122.3"	"124.1"	""	"1125"	"30"	"37.000"	"30.000"	"0.0597203750924283"	"14"	"0.0001308"	"0.000213"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLDTSWPTPPPALR"	"[R].nVLDTSWPTPPPALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"947.02612"	"1893.04497"	"1893.04316"	"0.95"	"0.00090"	"12/150"	"12"	"150"	"1165679.66973877"	"HCD"	"MS2"	"12.2289"	"67.9"	"100.000"	"62.2062"	"19854"	"19854"	"19827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.8"	""	"80.1"	""	"85.4"	""	"93.0"	""	"137.9"	"150.1"	""	"1125"	"43"	"37.000"	"30.000"	"0.00255930783834402"	"15"	"0"	"2.06E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLGLVMDGFNSLLR"	"[R].tQLGLVMDGFNSLLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"631.68652"	"1893.04502"	"1893.04653"	"-0.80"	"-0.00051"	"13/160"	"13"	"160"	"523855.83026123"	"HCD"	"MS2"	"7.35289"	"9.4"	"100.000"	"84.8875"	"29038"	"29038"	"29019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.9"	""	"8.2"	""	"14.2"	""	"16.0"	""	"19.0"	"18.1"	""	"1127"	"48"	"37.000"	"30.000"	"0.000895146092834847"	"20"	"0"	"4.832E-05"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLDTSWPTPPPALR"	"[R].nVLDTSWPTPPPALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"631.68787"	"1893.04905"	"1893.04316"	"3.11"	"0.00196"	"13/150"	"13"	"150"	"6619158.6819458"	"HCD"	"MS2"	"32.65154"	"145.7"	"100.000"	"62.1093"	"19814"	"19814"	"19795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.5"	""	"208.7"	""	"176.0"	""	"215.5"	"0.1"	"280.4"	"291.2"	""	"1113"	"14"	"37.000"	"30.000"	"2.16005678673796"	"19"	"0.0001889"	"0.0005435"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLDTSWPTPPPALR"	"[R].nVLDTSWPTPPPALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"631.68805"	"1893.04959"	"1893.04316"	"3.40"	"0.00214"	"13/150"	"13"	"150"	"6224573.41937256"	"HCD"	"MS2"	"40.86143"	"140.0"	"100.000"	"61.9918"	"19713"	"19713"	"19689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"207.4"	""	"185.8"	""	"188.0"	""	"192.2"	"4.1"	"277.4"	"272.4"	""	"1108"	"15"	"37.000"	"30.000"	"1.75190182373328"	"19"	"0.0001889"	"0.0005454"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQQImk.[F]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"631.68854"	"1893.05106"	"1893.05559"	"-2.39"	"-0.00151"	"10/98"	"10"	"98"	"2779163.34228516"	"HCD"	"MS2"	"56.83265"	"107.1"	"100.000"	"53.6263"	"16304"	"16304"	"16291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.8"	""	"136.1"	""	"142.1"	""	"196.3"	"0.0"	"187.4"	"211.9"	""	"1114"	"34"	"37.000"	"30.000"	"0.0223282761718408"	"20"	"0"	"0.000164"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQQImk.[F]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"631.68921"	"1893.05307"	"1893.05559"	"-1.33"	"-0.00084"	"11/98"	"11"	"98"	"2353704.94152832"	"HCD"	"MS2"	"0"	"97.2"	"100.000"	"53.7273"	"16400"	"16400"	"16390"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.9"	""	"112.0"	""	"145.4"	""	"165.3"	"0.1"	"173.9"	"187.6"	""	"1100"	"25"	"37.000"	"30.000"	"0.177976511311295"	"18"	"0"	"0.0001349"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIYLPPQAESAK"	"[K].fAIYLPPQAESAk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.69971"	"1893.08457"	"1893.08861"	"-2.13"	"-0.00135"	"13/108"	"13"	"108"	"2603652.13409424"	"HCD"	"MS2"	"3.370013"	"83.5"	"100.000"	"61.5564"	"19535"	"19535"	"19513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.7"	""	"115.5"	""	"116.7"	""	"133.7"	"1.4"	"143.6"	"147.1"	""	"875"	"43"	"36.000"	"29.000"	"0.00241533879685331"	"15"	"0"	"0.0001047"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIYLPPQAESAK"	"[K].fAIYLPPQAESAk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"947.04651"	"1893.08574"	"1893.08861"	"-1.51"	"-0.00143"	"10/108"	"10"	"108"	"640029.185791016"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"61.6370"	"19568"	"19568"	"19545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.0"	""	"45.7"	""	"49.1"	""	"43.5"	""	"52.1"	"58.1"	""	"885"	"55"	"36.000"	"29.000"	"0.000136117284052276"	"18"	"0"	"4.764E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIYLPPQAESAK"	"[K].fAIYLPPQAESAk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.70044"	"1893.08677"	"1893.08861"	"-0.97"	"-0.00061"	"13/108"	"13"	"108"	"3092950.71105957"	"HCD"	"MS2"	"0"	"87.7"	"100.000"	"61.7291"	"19659"	"19659"	"19635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.3"	""	"119.1"	""	"139.6"	""	"116.2"	""	"148.3"	"160.4"	""	"858"	"38"	"36.000"	"29.000"	"0.00625831317658125"	"15"	"0.0001308"	"0.0002946"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIYLPPQAESAK"	"[K].fAIYLPPQAESAk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"947.04773"	"1893.08818"	"1893.08861"	"-0.22"	"-0.00021"	"13/108"	"13"	"108"	"592379.081298828"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"61.8167"	"19695"	"19695"	"19667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.7"	""	"40.1"	""	"38.8"	""	"42.4"	"1.7"	"46.4"	"50.1"	""	"869"	"43"	"36.000"	"29.000"	"0.00208444183432642"	"17"	"0"	"0.0001134"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIYLPPQAESAK"	"[K].fAIYLPPQAESAk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"947.04797"	"1893.08867"	"1893.08861"	"0.03"	"0.00003"	"10/108"	"10"	"108"	"1004390.81915283"	"HCD"	"MS2"	"46.78375"	"68.7"	"100.000"	"61.9641"	"19702"	"19702"	"19673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.7"	""	"82.1"	""	"75.3"	""	"99.3"	""	"140.1"	"159.7"	""	"853"	"19"	"36.000"	"29.000"	"0.572689255925299"	"20"	"7.476E-05"	"0.0002011"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIYLPPQAESAK"	"[K].fAIYLPPQAESAk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.70227"	"1893.09226"	"1893.08861"	"1.93"	"0.00122"	"12/108"	"12"	"108"	"5654558.16705322"	"HCD"	"MS2"	"49.19461"	"135.5"	"100.000"	"62.0795"	"19802"	"19802"	"19779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.0"	""	"189.0"	""	"178.6"	""	"177.4"	""	"269.2"	"280.0"	""	"796"	"15"	"35.000"	"29.000"	"1.16918456148069"	"13"	"0.0001859"	"0.0003605"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIYLPPQAESAK"	"[K].fAIYLPPQAESAk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.70258"	"1893.09317"	"1893.08861"	"2.41"	"0.00152"	"12/108"	"12"	"108"	"4387694.10717773"	"HCD"	"MS2"	"18.54745"	"117.7"	"100.000"	"61.8745"	"19665"	"19665"	"19641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.6"	""	"166.1"	""	"174.7"	""	"177.1"	""	"220.3"	"213.9"	""	"793"	"26"	"35.000"	"28.000"	"0.0986831926698969"	"15"	"0.0001859"	"0.0003675"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVLQYVVPEVK"	"[R].fNVLQYVVPEVk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"947.06500"	"1893.12273"	"1893.12499"	"-1.20"	"-0.00113"	"13/108"	"13"	"108"	"239592.774169922"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"81.2458"	"27604"	"27604"	"27582"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"18.2"	""	"20.6"	""	"22.1"	""	"27.8"	"31.3"	""	"598"	"41"	"34.000"	"27.000"	"0.00227337556805114"	"15"	"0.0001889"	"0.0004011"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVLQYVVPEVK"	"[R].fNVLQYVVPEVk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"631.71259"	"1893.12320"	"1893.12499"	"-0.94"	"-0.00060"	"13/108"	"13"	"108"	"2404014.4921875"	"HCD"	"MS2"	"17.47089"	"54.7"	"100.000"	"81.0914"	"27490"	"27490"	"27472"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.9"	""	"78.2"	""	"76.1"	""	"86.4"	"1.4"	"93.8"	"94.7"	""	"598"	"44"	"34.000"	"27.000"	"0.00113676629499848"	"17"	"0"	"2.287E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVLQYVVPEVK"	"[R].fNVLQYVVPEVk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"631.71271"	"1893.12357"	"1893.12499"	"-0.75"	"-0.00047"	"12/108"	"12"	"108"	"2174986.44335938"	"HCD"	"MS2"	"10.17577"	"48.2"	"100.000"	"81.0794"	"27536"	"27536"	"27518"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.4"	""	"65.4"	""	"69.2"	""	"75.0"	""	"85.3"	"87.8"	""	"598"	"44"	"34.000"	"27.000"	"0.0011160179718092"	"19"	"0"	"2.228E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVLQYVVPEVK"	"[R].fNVLQYVVPEVk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"947.06622"	"1893.12517"	"1893.12499"	"0.09"	"0.00009"	"7/108"	"7"	"108"	"375485.841674805"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"81.1792"	"27526"	"27526"	"27504"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.6"	""	"30.2"	""	"35.4"	""	"33.7"	""	"34.2"	"41.7"	""	"589"	"47"	"34.000"	"27.000"	"0.000537137284333133"	"15"	"0.0001308"	"0.0002439"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLFDELVVDK"	"[R].kLFDELVVDk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"631.72656"	"1893.16513"	"1893.16641"	"-0.67"	"-0.00043"	"11/100"	"11"	"100"	"6091275.73114014"	"HCD"	"MS2"	"27.42675"	"232.3"	"100.000"	"58.7485"	"18394"	"18394"	"18377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"308.3"	""	"290.1"	""	"273.3"	""	"493.1"	"0.9"	"405.9"	"429.1"	""	"313"	"29"	"31.000"	"24.000"	"0.0189022865194211"	"16"	"0"	"6.987E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLFDELVVDK"	"[R].kLFDELVVDk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.72662"	"1893.16532"	"1893.16641"	"-0.58"	"-0.00036"	"8/100"	"8"	"100"	"11704581.6903076"	"HCD"	"MS2"	"2.491794"	"599.5"	"100.000"	"58.3992"	"18251"	"18251"	"18234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"744.2"	""	"746.3"	""	"717.1"	""	"1375.2"	""	"1106.2"	"994.0"	""	"312"	"19"	"31.000"	"24.000"	"0.1972988702055"	"14"	"0"	"0.0001259"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLFDELVVDK"	"[R].kLFDELVVDk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.72675"	"1893.16568"	"1893.16641"	"-0.38"	"-0.00024"	"8/100"	"8"	"100"	"12233781.7757568"	"HCD"	"MS2"	"1.292605"	"569.3"	"99.524"	"58.5385"	"18361"	"18361"	"18341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"703.5"	""	"687.3"	""	"629.7"	""	"1318.8"	""	"1076.1"	"984.5"	""	"312"	"18"	"31.000"	"24.000"	"0.271721872249092"	"14"	"0"	"6.521E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQVLESFQVK"	"[K].kQVLESFQVk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.72943"	"1893.17374"	"1893.17764"	"-2.06"	"-0.00130"	"9/92"	"9"	"92"	"7692321.80187988"	"HCD"	"MS2"	"12.09837"	"244.7"	"54.797"	"43.6330"	"12298"	"12298"	"12273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.1"	""	"330.6"	""	"295.6"	""	"381.2"	""	"448.8"	"631.6"	""	"287"	"22"	"31.000"	"24.000"	"0.0928649653599217"	"14"	"0"	"0.0001778"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQVLESFQVK"	"[K].kQVLESFQVk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.72961"	"1893.17429"	"1893.17764"	"-1.77"	"-0.00112"	"9/92"	"9"	"92"	"5603385.41247559"	"HCD"	"MS2"	"8.612155"	"330.8"	"100.000"	"43.4927"	"12192"	"12192"	"12171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"364.6"	""	"367.0"	""	"348.2"	""	"340.6"	""	"447.3"	"1290.5"	""	"284"	"9"	"31.000"	"24.000"	"1.66068913524822"	"13"	"0.0001859"	"0.000373"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVqQImk.[F]"	"N-Term(TMT6plex); Q8(Deamidated); M11(Oxidation); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.02258"	"1894.05320"	"1894.03961"	"7.17"	"0.00453"	"11/98"	"11"	"98"	"3246231.86883545"	"HCD"	"MS2"	"43.76732"	"131.9"	"100.000"	"53.8164"	"16379"	"16379"	"16366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.0"	""	"165.1"	""	"171.9"	""	"220.0"	"11.8"	"263.6"	"235.5"	""	"1095"	"11"	"37.000"	"30.000"	"4.15321222328478"	"13"	"0.0004166"	"0.002182"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVQqImk.[F]"	"N-Term(TMT6plex); Q9(Deamidated); M11(Oxidation); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"632.02258"	"1894.05320"	"1894.03961"	"7.17"	"0.00453"	"11/98"	"11"	"98"	"3246231.86883545"	"HCD"	"MS2"	"43.76732"	"131.9"	"100.000"	"53.8164"	"16379"	"16379"	"16366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.0"	""	"165.1"	""	"171.9"	""	"220.0"	"11.8"	"263.6"	"235.5"	""	"1095"	"11"	"37.000"	"30.000"	"4.1627863662475"	"13"	"0.0004166"	"0.002445"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIFGPVQQIMK"	"[K].eEIFGPVqQImk.[F]"	"N-Term(TMT6plex); Q8(Deamidated); M11(Oxidation); K12(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.1364"	"0.0000"	"1"	"1"	"1"	"632.02325"	"1894.05521"	"1894.03961"	"8.24"	"0.00520"	"12/98"	"12"	"98"	"2444721.07330322"	"HCD"	"MS2"	"37.02876"	"92.5"	"100.000"	"53.7821"	"16421"	"16421"	"16409"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.5"	""	"113.8"	""	"127.8"	""	"162.3"	""	"175.4"	"169.8"	""	"1093"	"22"	"37.000"	"30.000"	"0.380706389961535"	"17"	"0.000523"	"0.002831"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIGGLNTETNEK"	"[K].lFIGGLNTETNEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"947.53772"	"1894.06816"	"1894.06860"	"-0.23"	"-0.00022"	"7/116"	"7"	"116"	"278409.583374023"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"55.6277"	"17172"	"17172"	"17141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.3"	""	"20.3"	""	"19.9"	""	"57.1"	""	"46.3"	"48.3"	""	"1013"	"46"	"37.000"	"30.000"	"0.00132916669222422"	"27"	"0.0001889"	"0.0003978"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLGMYLEPQQAR"	"[R].vNFLGMYLEPQQAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.33820"	"1895.00003"	"1895.00467"	"-2.45"	"-0.00155"	"16/128"	"16"	"128"	"4277016.97808838"	"HCD"	"MS2"	"72.69009"	"46.6"	"100.000"	"70.8491"	"23373"	"23373"	"23354"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.5"	""	"60.7"	""	"69.6"	""	"65.6"	"0.9"	"89.1"	"92.3"	""	"1213"	"39"	"37.000"	"30.000"	"0.00792192643651961"	"15"	"0"	"2.322E-05"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLGMYLEPQQAR"	"[R].vNFLGMYLEPQQAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"632.33899"	"1895.00241"	"1895.00467"	"-1.19"	"-0.00075"	"14/128"	"14"	"128"	"3880542.60644531"	"HCD"	"MS2"	"53.85741"	"38.3"	"100.000"	"70.9199"	"23350"	"23350"	"23331"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.2"	""	"47.8"	""	"50.6"	""	"59.0"	""	"88.7"	"80.8"	""	"1213"	"54"	"37.000"	"30.000"	"0.000254583823790546"	"19"	"0"	"8.299E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLGMYLEPQQAR"	"[R].vNFLGMYLEPQQAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"948.00531"	"1895.00334"	"1895.00467"	"-0.70"	"-0.00066"	"6/128"	"6"	"128"	"140904.328491211"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"71.2059"	"23467"	"23467"	"23443"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.1"	""	"11.3"	""	"8.9"	""	"10.4"	""	"20.9"	"23.0"	""	"1209"	"18"	"37.000"	"30.000"	"0.855847339984055"	"14"	"0.0008453"	"0.008206"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLGMYLEPQQAR"	"[R].vNFLGMYLEPQQAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"948.00531"	"1895.00334"	"1895.00467"	"-0.70"	"-0.00066"	"12/128"	"12"	"128"	"653226.12310791"	"HCD"	"MS2"	"0"	"32.1"	"100.000"	"70.8692"	"23330"	"23330"	"23299"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.6"	""	"37.8"	""	"35.4"	""	"44.6"	"1.9"	"68.0"	"78.0"	""	"1209"	"55"	"37.000"	"30.000"	"0.000214484693791696"	"19"	"0"	"4.985E-06"	"1.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLGMYLEPQQAR"	"[R].vNFLGMYLEPQQAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"948.00623"	"1895.00517"	"1895.00467"	"0.27"	"0.00025"	"9/128"	"9"	"128"	"187288.0859375"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"71.0915"	"23472"	"23472"	"23450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.2"	""	"10.7"	""	"15.3"	""	"19.0"	""	"29.6"	"26.4"	""	"1207"	"33"	"37.000"	"30.000"	"0.0334716617770099"	"15"	"0.0001308"	"0.0002126"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFLGMYLEPQQAR"	"[R].vNFLGMYLEPQQAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"948.00635"	"1895.00542"	"1895.00467"	"0.40"	"0.00037"	"9/128"	"9"	"128"	"565078.596008301"	"HCD"	"MS2"	"0"	"28.8"	"100.000"	"70.7825"	"23346"	"23346"	"23322"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.9"	""	"35.5"	""	"33.5"	""	"40.3"	"0.7"	"64.5"	"66.6"	""	"1208"	"53"	"37.000"	"30.000"	"0.000334223465966305"	"19"	"0"	"5.266E-06"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFLFRPWDVTK"	"[R].qFLFRPWDVTk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.36945"	"1895.09378"	"1895.09436"	"-0.30"	"-0.00019"	"9/104"	"9"	"104"	"4254332.61737061"	"HCD"	"MS2"	"46.50346"	"224.3"	"100.000"	"60.4517"	"19084"	"19084"	"19065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.9"	""	"313.6"	""	"319.0"	""	"373.4"	""	"396.7"	"394.1"	""	"808"	"8"	"36.000"	"29.000"	"6.05872673542959"	"13"	"0.0001889"	"0.0009146"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFLFRPWDVTK"	"[R].qFLFRPWDVTk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"632.36987"	"1895.09507"	"1895.09436"	"0.37"	"0.00024"	"9/104"	"9"	"104"	"4694232.03448486"	"HCD"	"MS2"	"43.73664"	"252.2"	"100.000"	"60.5877"	"19193"	"19193"	"19171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"391.5"	""	"319.3"	""	"348.5"	""	"445.8"	""	"437.3"	"445.4"	""	"797"	"8"	"36.000"	"29.000"	"6.2291433559242"	"14"	"0.0002723"	"0.001389"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQDTIEEMALK"	"[K].fLQDTIEEMALk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"948.52936"	"1896.05144"	"1896.05526"	"-2.01"	"-0.00191"	"5/114"	"5"	"114"	"117545.955749512"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"82.7507"	"28218"	"28218"	"28189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.5"	""	"16.1"	""	"13.2"	""	"13.2"	""	"23.3"	"22.7"	""	"1129"	"13"	"37.000"	"30.000"	"3.1598316604399"	"19"	"0.0006037"	"0.004129"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQDTIEEMALK"	"[K].fLQDTIEEMALk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"948.53168"	"1896.05608"	"1896.05526"	"0.43"	"0.00041"	"6/114"	"6"	"114"	"123041.214111328"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"82.7583"	"28170"	"28170"	"28144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.8"	""	"16.8"	""	"23.0"	""	"14.9"	""	"24.3"	"25.9"	""	"1084"	"23"	"37.000"	"30.000"	"0.267300201743575"	"19"	"0.0003839"	"0.001755"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPVGNTVFDLNK"	"[K].sFPVGNTVFDLNk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"632.69263"	"1896.06333"	"1896.06312"	"0.11"	"0.00007"	"11/128"	"11"	"128"	"1542799.51409912"	"HCD"	"MS2"	"36.32384"	"80.0"	"100.000"	"64.5248"	"20801"	"20801"	"20771"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.5"	""	"83.7"	""	"84.2"	""	"187.5"	""	"162.7"	"163.7"	""	"1068"	"10"	"37.000"	"30.000"	"5.32771834081243"	"14"	"0.0001889"	"0.0004749"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLHPPSHWPLIK"	"[K].lLHPPSHWPLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.79559"	"1896.16054"	"1896.16238"	"-0.97"	"-0.00046"	"12/88"	"12"	"88"	"4794407.79870605"	"HCD"	"MS2"	"16.22105"	"145.4"	"100.000"	"48.8600"	"14429"	"14429"	"14399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"185.8"	""	"213.2"	""	"192.9"	""	"236.4"	""	"274.8"	"276.2"	""	"355"	"19"	"32.000"	"25.000"	"0.214386955731453"	"14"	"0.0001308"	"0.0002193"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPGWTKPITIGR"	"[R].lVPGWTkPITIGR.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"632.73248"	"1896.18290"	"1896.18351"	"-0.32"	"-0.00020"	"5/116"	"5"	"116"	"4045667.82385254"	"HCD"	"MS2"	"36.29396"	"198.9"	"100.000"	"56.1181"	"17372"	"17372"	"17349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"302.2"	""	"281.3"	""	"324.2"	""	"287.3"	""	"324.8"	"363.0"	""	"225"	"3"	"30.000"	"23.000"	"5.24991802853575"	"13"	"0.000523"	"0.002823"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPGWTKPITIGR"	"[R].lVPGWTkPITIGR.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.73267"	"1896.18344"	"1896.18351"	"-0.03"	"-0.00002"	"11/116"	"11"	"116"	"34457101.1217041"	"HCD"	"MS2"	"23.52657"	"424.3"	"34.054"	"55.7933"	"17239"	"17239"	"17221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"751.7"	""	"731.5"	""	"729.7"	""	"560.0"	"2.8"	"552.2"	"673.9"	""	"223"	"21"	"30.000"	"23.000"	"0.0793003067723461"	"14"	"0"	"3.965E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPGWTKPITIGR"	"[R].lVPGWTkPITIGR.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.73297"	"1896.18436"	"1896.18351"	"0.45"	"0.00028"	"11/116"	"11"	"116"	"31916095.2305908"	"HCD"	"MS2"	"18.49767"	"459.3"	"33.662"	"55.6264"	"17117"	"17117"	"17099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"781.2"	""	"784.4"	""	"804.7"	""	"617.6"	""	"636.5"	"716.7"	""	"222"	"16"	"30.000"	"23.000"	"0.288617711511345"	"13"	"0.0001889"	"0.0004528"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YITPDQLADLYK"	"[R].yITPDQLADLYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.8971"	"0.0000"	"1"	"1"	"1"	"949.53638"	"1898.06548"	"1898.06754"	"-1.08"	"-0.00103"	"19/112"	"19"	"112"	"4645402.36151123"	"HCD"	"MS2"	"0"	"302.3"	"100.000"	"69.0394"	"22635"	"22635"	"22618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"562.8"	""	"348.2"	""	"405.2"	""	"443.5"	"9.2"	"529.4"	"562.4"	""	"1026"	"68"	"37.000"	"30.000"	"7.67568891576444E-06"	"23"	"0"	"3.434E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YITPDQLADLYK"	"[R].yITPDQLADLYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"949.53723"	"1898.06719"	"1898.06754"	"-0.18"	"-0.00018"	"10/112"	"10"	"112"	"1565025.61352539"	"HCD"	"MS2"	"0"	"115.4"	"100.000"	"68.7487"	"22516"	"22516"	"22490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"225.2"	""	"161.8"	""	"150.3"	""	"167.4"	"1.7"	"171.7"	"212.2"	""	"1037"	"65"	"37.000"	"30.000"	"1.51617300791177E-05"	"17"	"0"	"3.425E-05"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YITPDQLADLYK"	"[R].yITPDQLADLYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9103"	"0.0000"	"1"	"1"	"1"	"949.53741"	"1898.06755"	"1898.06754"	"0.01"	"0.00001"	"11/112"	"11"	"112"	"5682100.23822021"	"HCD"	"MS2"	"0"	"371.8"	"100.000"	"69.1654"	"22635"	"22635"	"22618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"676.5"	""	"443.8"	""	"488.9"	""	"540.0"	"8.7"	"668.2"	"693.6"	""	"1032"	"78"	"37.000"	"30.000"	"8.48495809178903E-07"	"25"	"0"	"2.744E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YITPDQLADLYK"	"[R].yITPDQLADLYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"949.53748"	"1898.06767"	"1898.06754"	"0.07"	"0.00007"	"9/112"	"9"	"112"	"253983.099304199"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"69.5065"	"22774"	"22774"	"22746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.3"	""	"24.9"	""	"22.3"	""	"37.5"	"1.5"	"48.1"	"41.4"	""	"1032"	"51"	"37.000"	"30.000"	"0.000449417212417337"	"23"	"7.476E-05"	"0.000198"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMLTTTFLDDVK"	"[R].gVMLTTTFLDDVk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.7609"	"0.0000"	"1"	"1"	"1"	"633.36096"	"1898.06833"	"1898.07091"	"-1.36"	"-0.00086"	"11/108"	"11"	"108"	"5362552.68029785"	"HCD"	"MS2"	"7.378926"	"137.0"	"100.000"	"72.7397"	"24145"	"24145"	"24127"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.2"	""	"234.4"	""	"170.1"	""	"189.7"	"0.1"	"254.0"	"257.8"	""	"1049"	"46"	"37.000"	"30.000"	"0.00124378550861954"	"27"	"0"	"5.799E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLVMDVLNIQGVQR"	"[K].sPLVMDVLNIQGVQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"949.53784"	"1898.06841"	"1898.07308"	"-2.46"	"-0.00234"	"8/134"	"8"	"134"	"275638.532897949"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"71.1836"	"23510"	"23510"	"23482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.9"	""	"23.7"	""	"20.6"	""	"26.7"	"1.6"	"30.0"	"39.6"	""	"1049"	"26"	"37.000"	"30.000"	"0.134507187715354"	"14"	"0.0007076"	"0.007042"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMLTTTFLDDVK"	"[R].gVMLTTTFLDDVk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"949.53815"	"1898.06902"	"1898.07091"	"-1.00"	"-0.00094"	"10/108"	"10"	"108"	"619660.338745117"	"HCD"	"MS2"	"0"	"46.9"	"100.000"	"72.8365"	"24185"	"24185"	"24159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.0"	""	"72.6"	""	"62.8"	""	"56.3"	""	"95.7"	"86.1"	""	"1043"	"54"	"37.000"	"30.000"	"0.000201490378533697"	"21"	"0"	"2.439E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMLTTTFLDDVK"	"[R].gVMLTTTFLDDVk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"633.36151"	"1898.06998"	"1898.07091"	"-0.49"	"-0.00031"	"11/108"	"11"	"108"	"5358845.25073242"	"HCD"	"MS2"	"10.22079"	"146.2"	"100.000"	"72.7945"	"24116"	"24116"	"24097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"224.2"	""	"245.5"	""	"186.5"	""	"207.9"	""	"282.0"	"240.2"	""	"1027"	"40"	"37.000"	"30.000"	"0.00547697108251737"	"23"	"0"	"2.571E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMLTTTFLDDVK"	"[R].gVMLTTTFLDDVk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"949.53864"	"1898.06999"	"1898.07091"	"-0.48"	"-0.00046"	"9/108"	"9"	"108"	"1263872.29595947"	"HCD"	"MS2"	"43.97658"	"80.3"	"100.000"	"72.7993"	"24118"	"24118"	"24097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.5"	""	"121.9"	""	"97.4"	""	"108.8"	""	"165.1"	"151.7"	""	"1027"	"52"	"37.000"	"30.000"	"0.000354438139271964"	"17"	"0"	"7.182E-06"	"1.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YITPDQLADLYK"	"[R].yITPDQLADLYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9831"	"0.0000"	"1"	"1"	"1"	"949.53894"	"1898.07060"	"1898.06754"	"1.62"	"0.00153"	"11/112"	"11"	"112"	"1038216.79412842"	"HCD"	"MS2"	"0"	"79.8"	"100.000"	"68.8770"	"22517"	"22517"	"22490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.4"	""	"100.4"	""	"99.8"	""	"118.8"	""	"143.3"	"154.4"	""	"1021"	"59"	"37.000"	"30.000"	"6.65266640399899E-05"	"17"	"0"	"0.0001379"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLVMDVLNIQGVQR"	"[K].sPLVMDVLNIQGVQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"949.53961"	"1898.07195"	"1898.07308"	"-0.60"	"-0.00057"	"7/134"	"7"	"134"	"255366.733215332"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"71.2980"	"23505"	"23505"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.6"	""	"18.7"	""	"20.7"	""	"22.4"	""	"26.0"	"29.6"	""	"1010"	"49"	"37.000"	"30.000"	"0.000589238856615786"	"16"	"0.0001308"	"0.0002085"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YITPDQLADLYK"	"[R].yITPDQLADLYk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.7885"	"0.0000"	"1"	"1"	"1"	"633.36255"	"1898.07309"	"1898.06754"	"2.93"	"0.00185"	"7/112"	"7"	"112"	"33527381.1816406"	"HCD"	"MS2"	"3.260754"	"240.2"	"27.860"	"69.1262"	"22619"	"22619"	"22602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"439.9"	""	"312.7"	""	"304.8"	""	"365.3"	"0.7"	"428.6"	"420.5"	""	"992"	"52"	"36.000"	"29.000"	"0.000308660941443903"	"26"	"0.0001889"	"0.000532"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKYPENFFLLR"	"[K].ikYPENFFLLR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"2"	"3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P63088; P62138; P62142"	"Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.38092"	"1898.12821"	"1898.13041"	"-1.16"	"-0.00073"	"9/98"	"9"	"98"	"8895985.87475586"	"HCD"	"MS2"	"5.126633"	"401.2"	"100.000"	"62.5846"	"20008"	"20008"	"19987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"733.1"	""	"691.1"	""	"718.0"	""	"533.4"	"1.3"	"511.8"	"593.1"	""	"489"	"14"	"33.000"	"26.000"	"1.0334247618794"	"13"	"0.0001889"	"0.00042"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKYPENFFLLR"	"[K].ikYPENFFLLR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"2"	"3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P63088; P62138; P62142"	"Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.38147"	"1898.12986"	"1898.13041"	"-0.29"	"-0.00019"	"10/98"	"10"	"98"	"5467174.68377686"	"HCD"	"MS2"	"6.540361"	"260.8"	"100.000"	"62.4593"	"19904"	"19904"	"19881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"441.3"	""	"443.4"	""	"452.8"	""	"359.2"	"0.3"	"359.1"	"404.1"	""	"476"	"6"	"33.000"	"26.000"	"5.57926458046141"	"13"	"0.0001889"	"0.0005312"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVNFSEFTGVWK"	"[K].aGVNFSEFTGVWk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"950.52148"	"1900.03569"	"1900.03690"	"-0.64"	"-0.00061"	"15/120"	"15"	"120"	"447870.878356934"	"HCD"	"MS2"	"0"	"45.9"	"100.000"	"70.7802"	"23345"	"23345"	"23322"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.0"	""	"71.9"	""	"71.1"	""	"79.2"	""	"90.8"	"83.4"	""	"1231"	"50"	"37.000"	"30.000"	"0.000607055023406009"	"18"	"0"	"6.88E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVNFSEFTGVWK"	"[K].aGVNFSEFTGVWk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"G3V7W1"	"Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"950.52191"	"1900.03655"	"1900.03690"	"-0.19"	"-0.00018"	"10/120"	"10"	"120"	"456046.648376465"	"HCD"	"MS2"	"0"	"48.1"	"100.000"	"70.8992"	"23342"	"23342"	"23315"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.4"	""	"68.6"	""	"74.3"	""	"85.4"	""	"84.0"	"92.5"	""	"1237"	"56"	"37.000"	"30.000"	"0.000146332133289494"	"19"	"7.476E-05"	"0.0001891"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLIFPNFEPLHK"	"[K].sLIFPNFEPLHk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"634.04083"	"1900.10794"	"1900.10968"	"-0.91"	"-0.00058"	"14/114"	"14"	"114"	"5422288.97344971"	"HCD"	"MS2"	"8.692195"	"139.9"	"100.000"	"63.6792"	"20455"	"20455"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.0"	""	"183.2"	""	"182.5"	""	"231.4"	"5.4"	"268.1"	"288.8"	""	"766"	"49"	"35.000"	"28.000"	"0.000502572561324355"	"22"	"0"	"2.012E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLIFPNFEPLHK"	"[K].sLIFPNFEPLHk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"634.04108"	"1900.10868"	"1900.10968"	"-0.53"	"-0.00033"	"14/114"	"14"	"114"	"5264157.26965332"	"HCD"	"MS2"	"15.79969"	"136.5"	"100.000"	"63.6000"	"20370"	"20370"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.5"	""	"185.2"	""	"174.8"	""	"221.1"	"3.9"	"273.5"	"276.4"	""	"711"	"36"	"35.000"	"28.000"	"0.00868639561482707"	"17"	"0"	"1.491E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLVWINEEDHLR"	"[K].tFLVWINEEDHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"634.34222"	"1901.01212"	"1901.01186"	"0.13"	"0.00009"	"12/126"	"12"	"126"	"3771930.7845459"	"HCD"	"MS2"	"23.51588"	"56.0"	"100.000"	"65.3648"	"21091"	"21091"	"21065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.4"	""	"70.6"	""	"82.8"	""	"86.4"	"1.1"	"106.7"	"100.9"	""	"1206"	"39"	"37.000"	"30.000"	"0.00715018555144798"	"17"	"0"	"5.7E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLVWINEEDHLR"	"[K].tFLVWINEEDHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"634.34247"	"1901.01285"	"1901.01186"	"0.52"	"0.00033"	"12/126"	"12"	"126"	"5092518.48291016"	"HCD"	"MS2"	"12.52045"	"59.0"	"100.000"	"65.3293"	"21129"	"21129"	"21107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.3"	""	"74.8"	""	"80.9"	""	"110.4"	"1.7"	"105.6"	"100.8"	""	"1189"	"40"	"37.000"	"30.000"	"0.00589049591238751"	"17"	"0"	"0.0001235"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLYPNDNFFEGK"	"[R].vLYPNDNFFEGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P09811; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"634.34467"	"1901.01944"	"1901.02092"	"-0.78"	"-0.00049"	"7/110"	"7"	"110"	"9007353.85491943"	"HCD"	"MS2"	"15.8777"	"265.1"	"100.000"	"62.3052"	"19894"	"19894"	"19875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"468.7"	""	"334.2"	""	"367.7"	""	"360.4"	"3.1"	"409.0"	"564.8"	""	"1228"	"29"	"37.000"	"30.000"	"0.0855398277008416"	"14"	"0"	"0.0001508"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLYPNDNFFEGK"	"[R].vLYPNDNFFEGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P09811; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"951.01337"	"1901.01946"	"1901.02092"	"-0.77"	"-0.00073"	"10/110"	"10"	"110"	"1584797.62585449"	"HCD"	"MS2"	"0"	"118.9"	"100.000"	"62.0745"	"19747"	"19747"	"19721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"227.8"	""	"162.7"	""	"165.3"	""	"147.6"	"0.3"	"161.6"	"258.6"	""	"1228"	"60"	"37.000"	"30.000"	"6.60949641168718E-05"	"25"	"0"	"0.0001184"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLYPNDNFFEGK"	"[R].vLYPNDNFFEGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P09811; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"634.34479"	"1901.01981"	"1901.02092"	"-0.58"	"-0.00037"	"6/110"	"6"	"110"	"9260259.4072876"	"HCD"	"MS2"	"15.85432"	"206.4"	"74.825"	"62.1785"	"19789"	"19789"	"19769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"349.7"	""	"276.0"	""	"274.3"	""	"283.6"	"5.1"	"315.2"	"449.8"	""	"1228"	"31"	"37.000"	"30.000"	"0.054096400802692"	"23"	"0"	"0.0001491"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLYPNDNFFEGK"	"[R].vLYPNDNFFEGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P09811; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"951.01373"	"1901.02019"	"1901.02092"	"-0.38"	"-0.00037"	"9/110"	"9"	"110"	"1875487.42279053"	"HCD"	"MS2"	"0"	"136.8"	"100.000"	"62.1970"	"19850"	"19850"	"19827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.9"	""	"186.3"	""	"178.1"	""	"174.3"	""	"198.3"	"304.0"	""	"1229"	"42"	"37.000"	"30.000"	"0.00354422991754538"	"17"	"7.476E-05"	"0.0002003"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLYPNDNFFEGK"	"[R].vLYPNDNFFEGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P09811; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"951.01416"	"1901.02104"	"1901.02092"	"0.06"	"0.00006"	"8/110"	"8"	"110"	"161194.981262207"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"62.4384"	"19896"	"19896"	"19865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.4"	""	"14.6"	""	"16.6"	""	"15.9"	""	"18.8"	"26.7"	""	"1229"	"16"	"37.000"	"30.000"	"1.6924735382013"	"13"	"0.0003839"	"0.001742"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPMEISLPIALSK"	"[K].gSPMEISLPIALSk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.4872"	"0.0000"	"1"	"1"	"1"	"634.37640"	"1901.11466"	"1901.11819"	"-1.86"	"-0.00118"	"11/126"	"11"	"126"	"6779925.47668457"	"HCD"	"MS2"	"5.572982"	"152.6"	"100.000"	"72.0109"	"23796"	"23796"	"23777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.4"	""	"218.1"	""	"217.6"	""	"244.3"	"1.7"	"252.8"	"264.5"	""	"779"	"39"	"35.000"	"28.000"	"0.00515831027958321"	""	"0"	"1.681E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPMEISLPIALSK"	"[K].gSPMEISLPIALSk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.5500"	"0.0000"	"1"	"1"	"1"	"634.37665"	"1901.11539"	"1901.11819"	"-1.47"	"-0.00093"	"12/126"	"12"	"126"	"10292321.4875488"	"HCD"	"MS2"	"22.27678"	"219.9"	"100.000"	"71.9910"	"23840"	"23840"	"23823"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"378.4"	""	"314.8"	""	"302.8"	""	"344.7"	""	"360.6"	"379.1"	""	"779"	"40"	"35.000"	"28.000"	"0.00433019507776179"	""	"0"	"5.885E-06"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPMEISLPIALSK"	"[K].gSPMEISLPIALSk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"634.37732"	"1901.11740"	"1901.11819"	"-0.41"	"-0.00026"	"11/126"	"11"	"126"	"5180314.08599854"	"HCD"	"MS2"	"7.191632"	"123.3"	"100.000"	"72.3088"	"23969"	"23969"	"23951"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.2"	""	"168.8"	""	"182.9"	""	"200.6"	"0.0"	"209.1"	"219.6"	""	"762"	"36"	"35.000"	"28.000"	"0.00979320793234938"	""	"0"	"2.665E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPMEISLPIALSK"	"[K].gSPMEISLPIALSk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.6042"	"0.0000"	"1"	"1"	"1"	"634.37750"	"1901.11795"	"1901.11819"	"-0.12"	"-0.00008"	"12/126"	"12"	"126"	"7756176.159729"	"HCD"	"MS2"	"3.51656"	"156.6"	"93.358"	"72.3175"	"23922"	"23922"	"23905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.9"	""	"195.7"	""	"219.6"	""	"254.5"	"1.4"	"268.7"	"297.7"	""	"759"	"48"	"35.000"	"28.000"	"0.000631265100815479"	""	"0"	"2.424E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPMEISLPIALSK"	"[K].gSPMEISLPIALSk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.3056"	"0.0000"	"1"	"1"	"1"	"951.06354"	"1901.11980"	"1901.11819"	"0.85"	"0.00080"	"14/126"	"14"	"126"	"317051.503112793"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"72.3181"	"23973"	"23973"	"23951"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.5"	""	"35.9"	""	"37.6"	""	"39.4"	"0.8"	"35.9"	"44.4"	""	"737"	"36"	"35.000"	"28.000"	"0.010243243391693"	""	"0.0001889"	"0.0008151"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPMEISLPIALSK"	"[K].gSPMEISLPIALSk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"951.06360"	"1901.11992"	"1901.11819"	"0.91"	"0.00086"	"11/126"	"11"	"126"	"374786.289794922"	"HCD"	"MS2"	"22.57237"	"31.6"	"100.000"	"72.4233"	"23965"	"23965"	"23937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.7"	""	"36.5"	""	"51.5"	""	"48.4"	"1.7"	"53.3"	"58.0"	""	"737"	"17"	"35.000"	"28.000"	"0.6690175217319"	"22"	"0.0004166"	"0.002363"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPMEISLPIALSK"	"[K].gSPMEISLPIALSk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"951.06458"	"1901.12187"	"1901.11819"	"1.94"	"0.00184"	"11/126"	"11"	"126"	"1299814.38085938"	"HCD"	"MS2"	"100"	"93.1"	"100.000"	"72.1099"	"23837"	"23837"	"23809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.9"	""	"125.0"	""	"140.9"	""	"153.8"	""	"148.5"	"161.7"	""	"749"	"48"	"35.000"	"28.000"	"0.000600415398813421"	"15"	"0"	"8.899E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPMEISLPIALSK"	"[K].gSPMEISLPIALSk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"951.06458"	"1901.12187"	"1901.11819"	"1.94"	"0.00184"	"19/126"	"19"	"126"	"1850780.43597412"	"HCD"	"MS2"	"0"	"123.0"	"100.000"	"72.0231"	"23853"	"23853"	"23823"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.9"	""	"189.5"	""	"171.7"	""	"202.5"	""	"198.7"	"212.3"	""	"749"	"55"	"35.000"	"28.000"	"0.000123438837210458"	"16"	"0"	"5.528E-06"	"1.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLALNPDAVELFK"	"[K].lLALNPDAVELFk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5XIR9"	"Ubiquitin-associated domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubac1 PE=1 SV=1"	"Q5XIR9"	"Ubiquitin-associated domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubac1 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"951.07764"	"1901.14800"	"1901.15121"	"-1.69"	"-0.00160"	"5/118"	"5"	"118"	"123919.37878418"	"HCD"	"MS2"	"33.0775"	"7.7"	"100.000"	"84.6651"	"28999"	"28999"	"28976"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"6.5"	""	"9.7"	""	"14.2"	""	"16.9"	"16.9"	""	"563"	"26"	"34.000"	"27.000"	"0.0762918944377271"	"15"	"0.0002277"	"0.001288"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMVLVNYLLFK"	"[R].tSmVLVNYLLFk.[G]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"634.71033"	"1902.11643"	"1902.11746"	"-0.54"	"-0.00035"	"13/100"	"13"	"100"	"2496145.67425537"	"HCD"	"MS2"	"23.99321"	"65.4"	"100.000"	"77.9573"	"26263"	"26263"	"26241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.6"	""	"64.9"	""	"76.0"	""	"215.5"	"0.5"	"117.0"	"97.0"	""	"741"	"28"	"35.000"	"28.000"	"0.0630649727360329"	"24"	"0"	"9.429E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMVLVNYLLFK"	"[R].tSmVLVNYLLFk.[G]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.8308"	"0.0000"	"1"	"1"	"1"	"951.56244"	"1902.11760"	"1902.11746"	"0.07"	"0.00007"	"16/100"	"16"	"100"	"395476.477416992"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"77.9849"	"26274"	"26274"	"26257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.8"	""	"29.4"	""	"29.4"	""	"131.0"	"0.3"	"50.0"	"47.9"	""	"729"	"65"	"35.000"	"28.000"	"1.14999918522005E-05"	"28"	"0"	"0.0001482"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMVLVNYLLFK"	"[R].tSmVLVNYLLFk.[G]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"951.56256"	"1902.11785"	"1902.11746"	"0.20"	"0.00019"	"9/100"	"9"	"100"	"416732.926818848"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"78.0044"	"26231"	"26231"	"26215"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.5"	""	"28.6"	""	"36.2"	""	"147.8"	""	"51.6"	"42.7"	""	"729"	"46"	"35.000"	"28.000"	"0.000827365738511654"	"21"	"0"	"0.0001569"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMVLVNYLLFK"	"[R].tSmVLVNYLLFk.[G]"	"N-Term(TMT6plex); M3(Oxidation); K12(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"634.71112"	"1902.11881"	"1902.11746"	"0.71"	"0.00045"	"11/100"	"11"	"100"	"2436402.92327881"	"HCD"	"MS2"	"29.53803"	"69.2"	"100.000"	"78.0021"	"26230"	"26230"	"26215"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.3"	""	"63.8"	""	"88.3"	""	"212.2"	"0.9"	"109.8"	"121.6"	""	"721"	"24"	"35.000"	"28.000"	"0.135489384245984"	"16"	"0"	"4.863E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASGLYSLTSTLYLR"	"[R].eASGLYSLTSTLYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"952.02106"	"1903.03484"	"1903.03741"	"-1.35"	"-0.00129"	"5/132"	"5"	"132"	"158741.410461426"	"HCD"	"MS2"	"18.36134"	"15.4"	"100.000"	"69.1868"	"22695"	"22695"	"22666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.2"	""	"16.1"	""	"19.3"	""	"32.4"	""	"30.9"	"28.3"	""	"1176"	"19"	"37.000"	"30.000"	"0.716765884167821"	"16"	"0.0003571"	"0.001531"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"635.03564"	"1903.09238"	"1903.09409"	"-0.90"	"-0.00057"	"13/124"	"13"	"124"	"670730.883850098"	"HCD"	"MS2"	"47.016"	"19.1"	"100.000"	"90.6001"	"31287"	"31287"	"31280"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.0"	""	"23.4"	""	"26.0"	""	"36.6"	"0.6"	"35.4"	"36.8"	""	"927"	"20"	"36.000"	"29.000"	"0.449831369818285"	"17"	"0.0001308"	"0.0002661"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.03577"	"1903.09275"	"1903.09409"	"-0.70"	"-0.00045"	"13/124"	"13"	"124"	"847661.475524902"	"HCD"	"MS2"	"22.98072"	"20.2"	"100.000"	"91.1307"	"31472"	"31472"	"31470"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.8"	""	"22.2"	""	"30.1"	""	"36.7"	""	"43.6"	"37.9"	""	"930"	"13"	"36.000"	"29.000"	"2.25140150926606"	"13"	"0.0001889"	"0.0005733"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"952.05005"	"1903.09282"	"1903.09409"	"-0.66"	"-0.00063"	"7/124"	"7"	"124"	"162014.89263916"	"HCD"	"MS2"	"5.626445"	"13.4"	"100.000"	"90.6615"	"31307"	"31307"	"31302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.8"	""	"18.0"	""	"17.2"	""	"22.4"	""	"24.0"	"26.2"	""	"930"	"10"	"36.000"	"29.000"	"4.1923057898677"	"13"	"0.006657"	"0.2424"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"952.05005"	"1903.09282"	"1903.09409"	"-0.66"	"-0.00063"	"13/124"	"13"	"124"	"293279.222900391"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"90.9214"	"31399"	"31399"	"31393"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.8"	""	"36.1"	""	"28.4"	""	"44.3"	"1.6"	"35.9"	"40.4"	""	"930"	"43"	"36.000"	"29.000"	"0.00217496840698547"	"16"	"0.0002277"	"0.001197"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"952.05017"	"1903.09307"	"1903.09409"	"-0.54"	"-0.00051"	"4/124"	"4"	"124"	"109372.112670898"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"91.1913"	"31494"	"31494"	"31485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.2"	""	"9.6"	""	"9.8"	""	"13.4"	""	"14.3"	"17.7"	""	"924"	"16"	"36.000"	"29.000"	"1.257888004332"	"14"	"0.004346"	"0.117"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"952.05023"	"1903.09319"	"1903.09409"	"-0.47"	"-0.00045"	"17/124"	"17"	"124"	"395243.808227539"	"HCD"	"MS2"	"0"	"31.2"	"100.000"	"90.7643"	"31314"	"31314"	"31303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.5"	""	"37.9"	""	"40.6"	""	"53.3"	"0.7"	"54.9"	"50.7"	""	"928"	"69"	"36.000"	"29.000"	"5.45152465491941E-06"	"17"	"0"	"6.451E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"635.03595"	"1903.09330"	"1903.09409"	"-0.41"	"-0.00026"	"12/124"	"12"	"124"	"792610.457519531"	"HCD"	"MS2"	"40.53558"	"23.2"	"100.000"	"90.4775"	"31215"	"31215"	"31205"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.1"	""	"27.2"	""	"30.0"	""	"38.1"	""	"51.1"	"46.5"	""	"928"	"19"	"36.000"	"29.000"	"0.634626175076473"	"17"	"0.0006037"	"0.004452"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"635.03595"	"1903.09330"	"1903.09409"	"-0.41"	"-0.00026"	"14/124"	"14"	"124"	"1127251.29248047"	"HCD"	"MS2"	"29.4645"	"30.6"	"100.000"	"90.9908"	"31395"	"31395"	"31390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.1"	""	"35.3"	""	"39.3"	""	"53.8"	"0.3"	"63.8"	"54.3"	""	"928"	"22"	"36.000"	"29.000"	"0.271968108334509"	"15"	"0.0001308"	"0.0002872"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"635.03595"	"1903.09330"	"1903.09409"	"-0.41"	"-0.00026"	"14/124"	"14"	"124"	"1162663.91650391"	"HCD"	"MS2"	"29.65878"	"32.6"	"100.000"	"90.8750"	"31382"	"31382"	"31378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.3"	""	"41.8"	""	"41.7"	""	"48.0"	"0.2"	"67.5"	"63.8"	""	"928"	"27"	"36.000"	"29.000"	"0.101278667909515"	"15"	"0.0001308"	"0.0002448"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"635.03595"	"1903.09330"	"1903.09409"	"-0.41"	"-0.00026"	"13/124"	"13"	"124"	"1445014.72106934"	"HCD"	"MS2"	"21.29854"	"38.8"	"100.000"	"90.7387"	"31304"	"31304"	"31300"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.5"	""	"43.3"	""	"57.6"	""	"68.6"	""	"71.0"	"70.6"	""	"928"	"30"	"36.000"	"29.000"	"0.0427088601293471"	"15"	"0"	"0.0001062"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"952.05054"	"1903.09380"	"1903.09409"	"-0.15"	"-0.00014"	"11/124"	"11"	"124"	"191373.448974609"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"90.4938"	"31222"	"31222"	"31211"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.7"	""	"19.2"	""	"22.0"	""	"24.5"	""	"18.8"	"23.5"	""	"932"	"26"	"36.000"	"29.000"	"0.114653130353279"	"14"	"0.0004166"	"0.002172"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIPALDNFLDKL"	"[K].eGIPALDNFLDkL.[-]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"952.05060"	"1903.09392"	"1903.09409"	"-0.09"	"-0.00008"	"12/124"	"12"	"124"	"243634.273986816"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"91.0235"	"31407"	"31407"	"31402"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.5"	""	"27.0"	""	"24.9"	""	"30.1"	""	"28.5"	"36.9"	""	"924"	"36"	"36.000"	"29.000"	"0.0105351803726419"	"15"	"0.0003839"	"0.001784"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQPGNPNYTLSLK"	"[R].iQPGNPNYTLSLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"952.05298"	"1903.09868"	"1903.10532"	"-3.49"	"-0.00332"	"18/122"	"18"	"122"	"1394973.86450195"	"HCD"	"MS2"	"0"	"102.0"	"100.000"	"50.2415"	"14988"	"14988"	"14974"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.4"	""	"128.4"	""	"135.2"	""	"174.1"	"1.2"	"198.7"	"185.2"	""	"883"	"69"	"36.000"	"29.000"	"5.90106920555255E-06"	"20"	"0"	"4.101E-06"	"1.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQPGNPNYTLSLK"	"[R].iQPGNPNYTLSLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"952.05621"	"1903.10515"	"1903.10532"	"-0.09"	"-0.00008"	"10/122"	"10"	"122"	"1267071.42089844"	"HCD"	"MS2"	"0"	"92.6"	"100.000"	"49.9402"	"14818"	"14818"	"14803"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.2"	""	"130.0"	""	"107.9"	""	"152.0"	"0.8"	"172.7"	"173.7"	""	"832"	"63"	"36.000"	"29.000"	"2.1433511614601E-05"	"21"	"0"	"1.371E-06"	"1.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLTGGSNWQPK"	"[K].kLTGGSNWQPk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"1"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"635.05005"	"1903.13559"	"1903.13684"	"-0.66"	"-0.00042"	"4/106"	"4"	"106"	"1899677.22003174"	"HCD"	"MS2"	"11.72066"	"122.6"	"100.000"	"34.9028"	"8729"	"8729"	"8698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.1"	""	"152.5"	""	"163.9"	""	"209.4"	"0.5"	"229.3"	"223.2"	""	"603"	"13"	"34.000"	"27.000"	"1.65305504923637"	"18"	"0"	"5.714E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLTGGSNWQPK"	"[K].kLTGGSNWQPk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"1"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"635.05066"	"1903.13742"	"1903.13684"	"0.31"	"0.00019"	"4/106"	"4"	"106"	"1675632.09356689"	"HCD"	"MS2"	"11.9943"	"113.8"	"100.000"	"34.8592"	"8668"	"8668"	"8638"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.9"	""	"151.5"	""	"150.1"	""	"202.0"	"3.8"	"212.5"	"201.2"	""	"597"	"14"	"34.000"	"27.000"	"1.22164306929408"	"19"	"0"	"0.0001712"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIEFPLPDEKTK"	"[R].kIEFPLPDEKTK.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"2"	"3"	"3"	"0.3077"	"0.0000"	"1"	"1"	"1"	"635.05597"	"1903.15335"	"1903.13047"	"12.02"	"0.00763"	"7/126"	"7"	"126"	"9253628.75024414"	"HCD"	"MS2"	"4.3595"	"422.8"	"100.000"	"49.3214"	"14570"	"14570"	"14543"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"633.5"	""	"582.0"	""	"644.5"	""	"640.1"	"9.1"	"740.3"	"752.7"	""	"484"	"13"	"33.000"	"26.000"	"1.31769641987866"	"22"	"0.007936"	"0.3258"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIWGLFSTGDEHSR"	"[R].lGIWGLFSTGDEHSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"635.33282"	"1903.98392"	"1903.98638"	"-1.29"	"-0.00082"	"13/124"	"13"	"124"	"3026760.56329346"	"HCD"	"MS2"	"6.479808"	"55.6"	"100.000"	"66.8282"	"21741"	"21741"	"21715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.6"	""	"69.7"	""	"69.2"	""	"98.4"	"2.6"	"102.0"	"106.2"	""	"1072"	"36"	"37.000"	"30.000"	"0.0136510101538558"	"17"	"0"	"2.419E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIWGLFSTGDEHSR"	"[R].lGIWGLFSTGDEHSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.33356"	"1903.98612"	"1903.98638"	"-0.14"	"-0.00009"	"12/124"	"12"	"124"	"2613382.92614746"	"HCD"	"MS2"	"33.57623"	"60.0"	"100.000"	"66.8934"	"21715"	"21715"	"21689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.0"	""	"73.3"	""	"73.0"	""	"127.8"	"1.7"	"116.7"	"111.9"	""	"1106"	"22"	"37.000"	"30.000"	"0.371300155668051"	"14"	"0"	"1.553E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEVAEYLTPVLK"	"[K].aLEVAEYLTPVLk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AZ50"	"Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1"	"Q6AZ50"	"Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.38770"	"1904.14853"	"1904.15087"	"-1.23"	"-0.00078"	"13/108"	"13"	"108"	"2471460.234375"	"HCD"	"MS2"	"32.9486"	"73.5"	"100.000"	"79.5078"	"26896"	"26896"	"26879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.0"	""	"85.4"	""	"89.6"	""	"170.5"	"0.7"	"142.3"	"134.9"	""	"506"	"14"	"34.000"	"27.000"	"0.959666911983415"	"14"	"0"	"0.0001725"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEVAEYLTPVLK"	"[K].aLEVAEYLTPVLk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AZ50"	"Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1"	"Q6AZ50"	"Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"952.57874"	"1904.15019"	"1904.15087"	"-0.36"	"-0.00034"	"10/108"	"10"	"108"	"306803.341308594"	"HCD"	"MS2"	"27.62064"	"23.2"	"100.000"	"79.5754"	"26872"	"26872"	"26849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.4"	""	"29.9"	""	"28.7"	""	"52.6"	""	"40.4"	"44.1"	""	"491"	"31"	"33.000"	"26.000"	"0.020991887801319"	"16"	"0.0001889"	"0.0008799"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEVAEYLTPVLK"	"[K].aLEVAEYLTPVLk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AZ50"	"Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1"	"Q6AZ50"	"Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"952.57910"	"1904.15093"	"1904.15087"	"0.03"	"0.00003"	"12/108"	"12"	"108"	"218894.224853516"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"79.5422"	"26910"	"26910"	"26879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.5"	""	"20.9"	""	"18.6"	""	"32.8"	""	"21.0"	"27.6"	""	"486"	"49"	"33.000"	"26.000"	"0.000323300423568676"	"19"	"0"	"0.00014"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEVAEYLTPVLK"	"[K].aLEVAEYLTPVLk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AZ50"	"Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1"	"Q6AZ50"	"Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"635.38873"	"1904.15165"	"1904.15087"	"0.41"	"0.00026"	"9/108"	"9"	"108"	"2422313.47302246"	"HCD"	"MS2"	"46.46253"	"69.6"	"100.000"	"79.5296"	"26853"	"26853"	"26833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.0"	""	"87.7"	""	"80.0"	""	"166.8"	"0.1"	"129.2"	"119.0"	""	"490"	"8"	"33.000"	"26.000"	"4.141580282526"	"16"	"0.0001889"	"0.000669"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMTTVDDFFQGTK"	"[K].gMTTVDDFFQGTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"635.66534"	"1904.98148"	"1904.98282"	"-0.70"	"-0.00045"	"9/120"	"9"	"120"	"3229370.53155518"	"HCD"	"MS2"	"21.268"	"111.3"	"100.000"	"60.5026"	"19105"	"19105"	"19081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.5"	""	"147.8"	""	"152.7"	""	"154.0"	""	"223.7"	"219.1"	""	"1120"	"42"	"37.000"	"30.000"	"0.00351712680935457"	"23"	"0"	"5.081E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMTTVDDFFQGTK"	"[K].gMTTVDDFFQGTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.9011"	"0.0000"	"1"	"1"	"1"	"952.99451"	"1904.98174"	"1904.98282"	"-0.57"	"-0.00054"	"11/120"	"11"	"120"	"448095.605529785"	"HCD"	"MS2"	"0"	"47.8"	"100.000"	"60.6060"	"19201"	"19201"	"19171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.1"	""	"63.3"	""	"68.3"	""	"57.5"	""	"86.0"	"95.9"	""	"1116"	"91"	"37.000"	"30.000"	"4.3414439548021E-08"	"28"	"0"	"6.495E-07"	"1.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMTTVDDFFQGTK"	"[K].gMTTVDDFFQGTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"635.66553"	"1904.98203"	"1904.98282"	"-0.42"	"-0.00026"	"9/120"	"9"	"120"	"3315630.98028564"	"HCD"	"MS2"	"24.22936"	"110.4"	"100.000"	"60.5922"	"19195"	"19195"	"19171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.8"	""	"155.6"	""	"161.9"	""	"143.3"	"2.0"	"198.4"	"226.5"	""	"1133"	"42"	"37.000"	"30.000"	"0.00361576264926946"	"23"	"0"	"0.0001264"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMTTVDDFFQGTK"	"[K].gMTTVDDFFQGTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.9863"	"0.0000"	"1"	"1"	"1"	"952.99475"	"1904.98223"	"1904.98282"	"-0.31"	"-0.00030"	"18/120"	"18"	"120"	"472408.687316895"	"HCD"	"MS2"	"0"	"51.9"	"100.000"	"60.4611"	"19088"	"19088"	"19065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.6"	""	"78.7"	""	"71.9"	""	"52.8"	"2.0"	"101.2"	"99.5"	""	"1133"	"73"	"37.000"	"30.000"	"2.81968058640567E-06"	"19"	"0"	"2.868E-06"	"1.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGVTPFMIFFK"	"[R].eDGVTPFmIFFk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"953.01471"	"1905.02214"	"1905.02323"	"-0.57"	"-0.00054"	"9/96"	"9"	"96"	"158608.375366211"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"80.6777"	"27373"	"27373"	"27342"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"6.7"	""	"12.4"	""	"38.6"	""	"17.1"	"21.0"	""	"1178"	"19"	"37.000"	"30.000"	"0.805592278275955"	"16"	"0.0006396"	"0.006297"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGVTPFMIFFK"	"[R].eDGVTPFmIFFk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"953.01501"	"1905.02275"	"1905.02323"	"-0.25"	"-0.00024"	"9/96"	"9"	"96"	"165066.869689941"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"80.7267"	"27342"	"27342"	"27312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"7.3"	""	"11.7"	""	"52.9"	""	"24.5"	"29.2"	""	"1184"	"8"	"37.000"	"30.000"	"9.66766753153445"	"13"	"0.000523"	"0.00288"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPTQALNFAFK"	"[R].yFPTQALNFAFk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"953.03607"	"1905.06487"	"1905.06748"	"-1.37"	"-0.00130"	"10/102"	"10"	"102"	"1584061.60479736"	"HCD"	"MS2"	"0"	"115.1"	"100.000"	"77.6148"	"26123"	"26123"	"26101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.1"	""	"172.2"	""	"169.7"	""	"199.6"	"0.4"	"206.1"	"208.7"	""	"1103"	"48"	"37.000"	"30.000"	"0.000958397157055279"	"17"	"0"	"1.047E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPTQALNFAFK"	"[R].yFPTQALNFAFk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"953.03699"	"1905.06670"	"1905.06748"	"-0.41"	"-0.00039"	"14/102"	"14"	"102"	"399093.21496582"	"HCD"	"MS2"	"13.13988"	"34.7"	"100.000"	"77.9138"	"26245"	"26245"	"26229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.4"	""	"43.7"	""	"46.8"	""	"85.0"	"1.6"	"61.3"	"58.5"	""	"1110"	"41"	"37.000"	"30.000"	"0.00485615995251227"	"15"	"7.476E-05"	"0.000185"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPTQALNFAFK"	"[R].yFPTQALNFAFk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.69379"	"1905.06681"	"1905.06748"	"-0.35"	"-0.00022"	"12/102"	"12"	"102"	"7655675.83428955"	"HCD"	"MS2"	"2.191143"	"200.4"	"100.000"	"77.6794"	"26150"	"26150"	"26133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"206.5"	""	"292.7"	""	"317.4"	""	"333.1"	""	"356.0"	"399.2"	""	"1115"	"37"	"37.000"	"30.000"	"0.0113565095832094"	"15"	"0"	"7.249E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPTQALNFAFK"	"[R].yFPTQALNFAFk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.69385"	"1905.06699"	"1905.06748"	"-0.26"	"-0.00016"	"13/102"	"13"	"102"	"6529666.17858887"	"HCD"	"MS2"	"4.068624"	"185.1"	"100.000"	"77.6966"	"26106"	"26106"	"26089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.1"	""	"267.4"	""	"264.8"	""	"343.0"	"1.4"	"334.3"	"352.0"	""	"1103"	"34"	"37.000"	"30.000"	"0.0223637957299783"	"15"	"0"	"6.02E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPTQALNFAFK"	"[R].yFPTQALNFAFk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.8955"	"0.0000"	"1"	"1"	"1"	"953.03735"	"1905.06743"	"1905.06748"	"-0.02"	"-0.00002"	"11/102"	"11"	"102"	"1521812.0859375"	"HCD"	"MS2"	"4.246631"	"115.5"	"100.000"	"77.6669"	"26093"	"26093"	"26073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.6"	""	"157.3"	""	"172.9"	""	"215.9"	"1.9"	"196.7"	"229.8"	""	"1099"	"67"	"37.000"	"30.000"	"1.08384629349511E-05"	"24"	"0"	"1.902E-06"	"1.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFPTQALNFAFK"	"[R].yFPTqALNFAFk.[D]"	"N-Term(TMT6plex); Q5(Deamidated); K12(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"953.53741"	"1906.06755"	"1906.05149"	"8.43"	"0.00803"	"14/102"	"14"	"102"	"319843.38470459"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"77.9748"	"26219"	"26219"	"26199"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.6"	""	"38.5"	""	"37.4"	""	"58.9"	""	"41.4"	"56.6"	""	"1146"	"36"	"37.000"	"30.000"	"0.0152459545926472"	"18"	"0.0009727"	"0.01059"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"953.58807"	"1906.16887"	"1906.17289"	"-2.11"	"-0.00201"	"10/100"	"10"	"100"	"12079518.5874023"	"HCD"	"MS2"	"0"	"502.9"	"48.345"	"41.9919"	"11588"	"11588"	"11578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"636.8"	""	"471.4"	""	"602.4"	""	"999.2"	"17.0"	"1053.0"	"996.1"	""	"345"	"61"	"32.000"	"25.000"	"1.29059238838174E-05"	"23"	"0"	"0.0001006"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"953.58832"	"1906.16936"	"1906.17289"	"-1.85"	"-0.00177"	"10/100"	"10"	"100"	"984489.931884766"	"HCD"	"MS2"	"0"	"96.6"	"100.000"	"44.2223"	"12489"	"12489"	"12470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.7"	""	"99.9"	""	"121.1"	""	"182.5"	"1.1"	"191.4"	"198.3"	""	"344"	"6"	"32.000"	"25.000"	"4.00431696318381"	"13"	"0.004631"	"0.1332"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.9286"	"0.0000"	"1"	"1"	"1"	"477.29791"	"1906.16982"	"1906.17289"	"-1.61"	"-0.00077"	"7/100"	"7"	"100"	"243744668.730469"	"HCD"	"MS2"	"0"	"409.1"	"6.089"	"41.8180"	"11519"	"11519"	"11505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"518.3"	""	"407.6"	""	"472.2"	""	"809.3"	""	"865.3"	"813.4"	""	"341"	"28"	"32.000"	"25.000"	"0.0288220178845177"	"17"	"0.0001889"	"0.0009304"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06152"	"1906.17002"	"1906.17289"	"-1.51"	"-0.00096"	"12/100"	"12"	"100"	"14577575.2506104"	"HCD"	"MS2"	"0"	"484.5"	"52.549"	"41.1486"	"11245"	"11245"	"11221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"582.5"	""	"517.7"	""	"535.1"	""	"928.6"	""	"1088.0"	"954.9"	""	"341"	"25"	"32.000"	"25.000"	"0.0529327409775885"	"14"	"0"	"3E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"953.58868"	"1906.17009"	"1906.17289"	"-1.47"	"-0.00140"	"10/100"	"10"	"100"	"15305764.8186646"	"HCD"	"MS2"	"0"	"963.7"	"73.757"	"41.9672"	"11624"	"11624"	"11602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1272.0"	""	"984.0"	""	"1089.7"	""	"2042.2"	"20.8"	"1896.0"	"1839.1"	""	"341"	"59"	"32.000"	"25.000"	"2.04044260587885E-05"	"23"	"0.0001308"	"0.0002826"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06158"	"1906.17020"	"1906.17289"	"-1.41"	"-0.00090"	"9/100"	"9"	"100"	"12694370.9560547"	"HCD"	"MS2"	"16.71481"	"410.3"	"57.218"	"43.2301"	"12138"	"12138"	"12127"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"444.7"	"2.7"	"383.6"	""	"482.6"	""	"706.3"	"1.6"	"1142.7"	"744.8"	""	"341"	"44"	"32.000"	"25.000"	"0.000657240599820141"	"15"	"0"	"1.119E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"953.58881"	"1906.17034"	"1906.17289"	"-1.34"	"-0.00128"	"10/100"	"10"	"100"	"8490577.92059326"	"HCD"	"MS2"	"0"	"609.5"	"87.746"	"42.2856"	"11752"	"11752"	"11742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"775.5"	""	"621.2"	""	"710.5"	""	"1199.2"	"18.5"	"1231.1"	"1230.2"	""	"340"	"59"	"32.000"	"25.000"	"1.95636066120554E-05"	"23"	"0"	"7.914E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.9118"	"0.0000"	"1"	"1"	"1"	"477.29810"	"1906.17055"	"1906.17289"	"-1.23"	"-0.00059"	"8/100"	"8"	"100"	"193159937.365723"	"HCD"	"MS2"	"5.696159"	"360.5"	"7.354"	"42.2352"	"11732"	"11732"	"11721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"450.1"	""	"355.1"	""	"418.4"	""	"726.9"	""	"760.4"	"712.6"	""	"324"	"34"	"32.000"	"25.000"	"0.00606059153000726"	"17"	"0.0001889"	"0.0006897"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06183"	"1906.17093"	"1906.17289"	"-1.03"	"-0.00065"	"13/100"	"13"	"100"	"46952785.9658203"	"HCD"	"MS2"	"14.54863"	"464.8"	"21.391"	"42.9528"	"12025"	"12025"	"12003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"669.9"	""	"586.3"	""	"584.1"	""	"878.3"	""	"843.5"	"844.9"	""	"321"	"29"	"32.000"	"25.000"	"0.0217007646392682"	"14"	"0"	"3.208E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06189"	"1906.17112"	"1906.17289"	"-0.93"	"-0.00059"	"8/100"	"8"	"100"	"15887488.4518433"	"HCD"	"MS2"	"0"	"635.9"	"68.675"	"41.3343"	"11365"	"11365"	"11341"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"776.0"	""	"646.5"	""	"719.9"	""	"1246.9"	""	"1388.4"	"1273.7"	""	"322"	"26"	"32.000"	"25.000"	"0.0377420839266507"	"14"	"0"	"4.882E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06195"	"1906.17130"	"1906.17289"	"-0.84"	"-0.00053"	"8/100"	"8"	"100"	"64047988.3723145"	"HCD"	"MS2"	"0"	"594.8"	"17.147"	"40.8184"	"11110"	"11110"	"11093"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"606.5"	""	"643.5"	""	"681.1"	""	"1156.1"	""	"1304.9"	"1267.1"	""	"334"	"17"	"32.000"	"25.000"	"0.344918486020359"	"14"	"0"	"8.121E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.2500"	"0.0000"	"1"	"1"	"1"	"477.29831"	"1906.17141"	"1906.17289"	"-0.78"	"-0.00037"	"5/100"	"5"	"100"	"30056278.9587402"	"HCD"	"MS2"	"11.33115"	"563.2"	"56.890"	"44.4289"	"12623"	"12623"	"12604"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"762.4"	""	"651.4"	""	"701.4"	""	"1110.0"	""	"1064.9"	"1051.3"	""	"334"	"4"	"32.000"	"25.000"	"6.26204913749959"	"16"	"0.00103"	"0.01293"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"636.06201"	"1906.17148"	"1906.17289"	"-0.74"	"-0.00047"	"8/100"	"8"	"100"	"48081301.4638672"	"HCD"	"MS2"	"15.20814"	"348.8"	"14.669"	"42.6874"	"11872"	"11872"	"11852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"513.2"	""	"458.9"	""	"446.1"	""	"651.6"	""	"608.4"	"627.2"	""	"334"	"29"	"32.000"	"25.000"	"0.0206879029950572"	"17"	"0"	"5.164E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06213"	"1906.17185"	"1906.17289"	"-0.55"	"-0.00035"	"8/100"	"8"	"100"	"91484419.4204102"	"HCD"	"MS2"	"0"	"400.4"	"8.764"	"42.3272"	"11725"	"11725"	"11708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"457.6"	""	"424.0"	""	"462.9"	""	"772.3"	""	"868.5"	"824.9"	""	"329"	"34"	"32.000"	"25.000"	"0.00674785749412968"	"15"	"0"	"9.295E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.9615"	"0.0000"	"1"	"1"	"1"	"477.29846"	"1906.17202"	"1906.17289"	"-0.46"	"-0.00022"	"10/100"	"10"	"100"	"69915864.3188477"	"HCD"	"MS2"	"15.25389"	"1924.8"	"100.000"	"41.9420"	"11614"	"11614"	"11586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2403.7"	""	"1954.7"	""	"2211.1"	""	"4085.5"	""	"3975.1"	"3778.6"	""	"330"	"26"	"32.000"	"25.000"	"0.0405960654684358"	"15"	"0.0003839"	"0.002007"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"636.06219"	"1906.17203"	"1906.17289"	"-0.45"	"-0.00029"	"8/100"	"8"	"100"	"74673811.6606445"	"HCD"	"MS2"	"0.08115964"	"374.4"	"9.369"	"42.6273"	"11892"	"11892"	"11875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"434.4"	""	"390.2"	""	"432.3"	""	"740.2"	""	"810.8"	"755.5"	""	"330"	"34"	"32.000"	"25.000"	"0.00718594591581188"	"15"	"0"	"5.87E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"953.58966"	"1906.17204"	"1906.17289"	"-0.45"	"-0.00042"	"10/100"	"10"	"100"	"15569807.0507813"	"HCD"	"MS2"	"0"	"1288.3"	"100.000"	"41.7171"	"11478"	"11478"	"11451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1707.8"	""	"1256.4"	""	"1527.9"	""	"2682.8"	"23.7"	"2532.2"	"2493.2"	""	"330"	"59"	"32.000"	"25.000"	"1.96102867527108E-05"	"23"	"0.0001308"	"0.0002396"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"636.06232"	"1906.17240"	"1906.17289"	"-0.26"	"-0.00017"	"13/100"	"13"	"100"	"10930564.9488525"	"HCD"	"MS2"	"0"	"442.8"	"73.363"	"43.1422"	"12050"	"12050"	"12041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"289.9"	""	"258.5"	""	"424.3"	""	"546.9"	""	"1915.2"	"850.0"	""	"329"	"46"	"32.000"	"25.000"	"0.000386514599029546"	"19"	"0"	"9.144E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06232"	"1906.17240"	"1906.17289"	"-0.26"	"-0.00017"	"6/100"	"6"	"100"	"203988688.349609"	"HCD"	"MS2"	"0"	"645.2"	"5.170"	"44.1766"	"12471"	"12471"	"12454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"867.0"	""	"708.1"	""	"773.3"	""	"1308.7"	""	"1218.2"	"1248.3"	""	"329"	"1"	"32.000"	"25.000"	"12.0272379233022"	"13"	"0.005946"	"0.1981"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"477.29858"	"1906.17251"	"1906.17289"	"-0.20"	"-0.00010"	"11/100"	"11"	"100"	"6174518.40161133"	"HCD"	"MS2"	"0"	"205.4"	"100.000"	"42.5086"	"11799"	"11799"	"11772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"276.2"	""	"250.4"	""	"265.1"	""	"363.3"	"3.2"	"403.7"	"386.6"	""	"329"	"17"	"32.000"	"25.000"	"0.323717294656776"	"15"	"0.0001889"	"0.0005814"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.9310"	"0.0000"	"1"	"1"	"1"	"477.29858"	"1906.17251"	"1906.17289"	"-0.20"	"-0.00010"	"8/100"	"8"	"100"	"59055114.1604004"	"HCD"	"MS2"	"8.552779"	"470.9"	"29.692"	"42.1707"	"11661"	"11661"	"11644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"540.4"	""	"460.5"	""	"559.6"	""	"908.9"	"13.7"	"1014.8"	"977.6"	""	"329"	"29"	"32.000"	"25.000"	"0.0214865111097688"	"16"	"0.0001889"	"0.0004617"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06244"	"1906.17276"	"1906.17289"	"-0.07"	"-0.00004"	"10/100"	"10"	"100"	"8288461.5637207"	"HCD"	"MS2"	"56.70979"	"494.5"	"100.000"	"43.8986"	"12406"	"12406"	"12384"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"644.7"	""	"544.5"	""	"582.2"	""	"919.2"	"22.2"	"1028.3"	"953.1"	""	"329"	"29"	"32.000"	"25.000"	"0.0208528731933616"	"14"	"0"	"2.055E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"953.59003"	"1906.17278"	"1906.17289"	"-0.06"	"-0.00006"	"16/100"	"16"	"100"	"331908.888671875"	"HCD"	"MS2"	"0"	"33.7"	"100.000"	"42.4398"	"11771"	"11771"	"11740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.3"	""	"31.4"	""	"45.8"	""	"64.1"	"1.8"	"70.8"	"62.6"	""	"329"	"45"	"32.000"	"25.000"	"0.000523800492323948"	"21"	"0"	"6.448E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06250"	"1906.17295"	"1906.17289"	"0.03"	"0.00002"	"8/100"	"8"	"100"	"62944820.5681152"	"HCD"	"MS2"	"4.56454"	"635.8"	"18.786"	"41.0040"	"11230"	"11230"	"11213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"674.2"	""	"734.7"	""	"758.2"	""	"1181.5"	"3.5"	"1380.8"	"1309.8"	""	"325"	"18"	"32.000"	"25.000"	"0.277238388213008"	"14"	"0"	"0.0001128"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.7895"	"0.0000"	"1"	"1"	"1"	"477.29874"	"1906.17312"	"1906.17289"	"0.12"	"0.00006"	"9/100"	"9"	"100"	"9212897.4876709"	"HCD"	"MS2"	"9.953969"	"191.9"	"67.676"	"42.6571"	"11904"	"11904"	"11875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"235.6"	""	"201.5"	""	"218.0"	""	"379.9"	"1.5"	"391.1"	"395.2"	""	"325"	"19"	"32.000"	"25.000"	"0.21323248359062"	"18"	"0.0001308"	"0.0002915"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06268"	"1906.17350"	"1906.17289"	"0.32"	"0.00020"	"17/100"	"17"	"100"	"2111281751.4375"	"HCD"	"MS2"	"5.183469"	"445.4"	"0.475"	"42.1871"	"11713"	"11713"	"11701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"565.2"	""	"429.7"	""	"534.1"	""	"884.1"	""	"926.1"	"894.6"	""	"328"	"48"	"32.000"	"25.000"	"0.000281088998431382"	"15"	"0"	"5.847E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06268"	"1906.17350"	"1906.17289"	"0.32"	"0.00020"	"14/100"	"14"	"100"	"2245314005.25"	"HCD"	"MS2"	"5.713692"	"527.8"	"0.487"	"41.9279"	"11563"	"11563"	"11557"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"647.7"	""	"517.3"	""	"622.1"	""	"1040.8"	""	"1116.9"	"1071.5"	""	"328"	"47"	"32.000"	"25.000"	"0.000292310117861487"	"15"	"7.476E-05"	"0.000184"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.06281"	"1906.17386"	"1906.17289"	"0.51"	"0.00032"	"8/100"	"8"	"100"	"112803947.392822"	"HCD"	"MS2"	"7.981911"	"3396.3"	"60.493"	"41.6529"	"11452"	"11452"	"11435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4370.7"	""	"3370.5"	""	"3903.0"	""	"7319.3"	""	"6841.8"	"6666.7"	""	"328"	"46"	"32.000"	"25.000"	"0.000435355312163989"	"15"	"0"	"3.445E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"636.06287"	"1906.17405"	"1906.17289"	"0.60"	"0.00038"	"14/100"	"14"	"100"	"412345632.467773"	"HCD"	"MS2"	"4.730215"	"2400.7"	"12.014"	"41.9146"	"11603"	"11603"	"11586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3199.5"	""	"2454.1"	""	"2762.2"	""	"5120.1"	""	"4800.7"	"4606.2"	""	"328"	"47"	"32.000"	"25.000"	"0.000316842803990776"	"18"	"0"	"5.75E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"953.59070"	"1906.17412"	"1906.17289"	"0.64"	"0.00061"	"11/100"	"11"	"100"	"523487.129943848"	"HCD"	"MS2"	"0"	"52.3"	"100.000"	"42.6226"	"11890"	"11890"	"11859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.0"	""	"59.8"	""	"57.9"	""	"100.7"	""	"114.6"	"104.1"	""	"328"	"22"	"32.000"	"25.000"	"0.0924365755554567"	"14"	"0.0001889"	"0.0005076"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.1250"	"0.0000"	"1"	"1"	"1"	"477.54337"	"1907.15163"	"1907.15691"	"-2.77"	"-0.00132"	"13/100"	"13"	"100"	"26376228.7439575"	"HCD"	"MS2"	"32.32804"	"811.7"	"100.000"	"44.0454"	"12417"	"12417"	"12390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1104.3"	""	"897.7"	""	"976.5"	""	"1631.8"	"4.9"	"1563.8"	"1518.6"	""	"514"	"16"	"34.000"	"27.000"	"0.663640868993091"	"16"	"0.0001859"	"0.0003504"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.3000"	"0.0000"	"1"	"1"	"1"	"636.38892"	"1907.15219"	"1907.15691"	"-2.47"	"-0.00157"	"16/100"	"16"	"100"	"8554112.93939209"	"HCD"	"MS2"	"10.80157"	"347.4"	"68.065"	"43.8755"	"12347"	"12347"	"12327"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"404.1"	""	"349.3"	""	"394.3"	""	"698.9"	""	"775.9"	"683.2"	""	"510"	"20"	"34.000"	"27.000"	"0.22779289835199"	"14"	"0"	"6.614E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"636.38959"	"1907.15421"	"1907.15691"	"-1.42"	"-0.00090"	"5/100"	"5"	"100"	"19013812.0230713"	"HCD"	"MS2"	"1.913715"	"654.6"	"58.181"	"45.8356"	"13193"	"13193"	"13181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"753.9"	""	"618.2"	""	"669.2"	""	"1351.7"	""	"1526.5"	"1308.7"	""	"505"	"12"	"34.000"	"27.000"	"1.42975420482159"	"13"	"0"	"0.0001628"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"477.54404"	"1907.15432"	"1907.15691"	"-1.36"	"-0.00065"	"7/100"	"7"	"100"	"19013640.7837524"	"HCD"	"MS2"	"2.268047"	"366.7"	"64.751"	"46.8887"	"13622"	"13622"	"13602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"433.3"	"2.8"	"341.7"	""	"391.5"	""	"775.5"	""	"802.3"	"743.2"	""	"502"	"19"	"33.000"	"27.000"	"0.306671714701383"	"14"	"0"	"0.0001833"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"636.38983"	"1907.15494"	"1907.15691"	"-1.03"	"-0.00066"	"8/100"	"8"	"100"	"22880482.9008789"	"HCD"	"MS2"	"9.316913"	"884.4"	"67.500"	"45.6058"	"13049"	"13049"	"13035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1055.5"	""	"855.9"	""	"931.5"	""	"1828.1"	"10.6"	"1918.8"	"1804.9"	""	"475"	"23"	"33.000"	"26.000"	"0.119581394587127"	"14"	"0"	"2.624E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.5231"	"0.0000"	"1"	"1"	"1"	"954.08118"	"1907.15508"	"1907.15691"	"-0.96"	"-0.00092"	"10/100"	"10"	"100"	"559886.141906738"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"45.0803"	"12888"	"12888"	"12859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.5"	""	"48.3"	""	"55.0"	""	"126.5"	""	"111.2"	"127.7"	""	"475"	"65"	"33.000"	"26.000"	"7.77434150337243E-06"	"26"	"0"	"4.021E-06"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"954.08124"	"1907.15520"	"1907.15691"	"-0.90"	"-0.00086"	"10/100"	"10"	"100"	"273483.934082031"	"HCD"	"MS2"	"0"	"27.8"	"100.000"	"44.8944"	"12763"	"12763"	"12736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.0"	""	"22.0"	""	"29.6"	""	"58.2"	"1.5"	"62.7"	"58.8"	""	"493"	"19"	"33.000"	"26.000"	"0.33636974316917"	"14"	"0.0008453"	"0.008197"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.5227"	"0.0000"	"1"	"1"	"1"	"636.39008"	"1907.15567"	"1907.15691"	"-0.65"	"-0.00041"	"8/100"	"8"	"100"	"54492433.6699219"	"HCD"	"MS2"	"5.507118"	"458.5"	"16.731"	"46.7764"	"13529"	"13529"	"13512"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"515.9"	""	"425.5"	""	"489.2"	""	"945.4"	"4.6"	"993.6"	"985.2"	""	"492"	"44"	"33.000"	"26.000"	"0.000895230988872931"	"15"	"0"	"1.01E-05"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.6341"	"0.0000"	"1"	"1"	"1"	"636.39014"	"1907.15586"	"1907.15691"	"-0.55"	"-0.00035"	"9/100"	"9"	"100"	"43157351.1726074"	"HCD"	"MS2"	"3.863493"	"1110.1"	"51.214"	"46.7716"	"13574"	"13574"	"13554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1329.1"	""	"1073.2"	""	"1204.4"	""	"2388.6"	"12.9"	"2313.3"	"2222.9"	""	"488"	"41"	"33.000"	"26.000"	"0.00199705408304889"	"18"	"0"	"1.026E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"477.54443"	"1907.15590"	"1907.15691"	"-0.53"	"-0.00025"	"7/100"	"7"	"100"	"4296775.06164551"	"HCD"	"MS2"	"0"	"163.0"	"100.000"	"46.8730"	"13568"	"13568"	"13544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.7"	""	"177.0"	""	"196.4"	""	"319.2"	"3.2"	"339.5"	"332.8"	""	"488"	"16"	"33.000"	"26.000"	"0.601713598285178"	"14"	"0"	"8.599E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.5172"	"0.0000"	"1"	"1"	"1"	"636.39020"	"1907.15604"	"1907.15691"	"-0.46"	"-0.00029"	"9/100"	"9"	"100"	"59580264.9589844"	"HCD"	"MS2"	"1.051423"	"693.6"	"22.494"	"44.7175"	"12690"	"12690"	"12673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"756.2"	""	"641.8"	""	"713.1"	""	"1507.5"	""	"1515.3"	"1468.6"	""	"488"	"29"	"33.000"	"26.000"	"0.0334495150944224"	"14"	"0"	"7.943E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.5814"	"0.0000"	"1"	"1"	"1"	"636.39020"	"1907.15604"	"1907.15691"	"-0.46"	"-0.00029"	"8/100"	"8"	"100"	"38462566.6473389"	"HCD"	"MS2"	"20.39796"	"1569.1"	"74.006"	"44.2381"	"12545"	"12545"	"12524"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2002.8"	""	"1604.0"	""	"1699.1"	""	"3402.3"	""	"3197.4"	"2993.1"	""	"488"	"43"	"33.000"	"26.000"	"0.00114918467640856"	"17"	"0"	"1.915E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"636.39038"	"1907.15659"	"1907.15691"	"-0.17"	"-0.00011"	"9/100"	"9"	"100"	"28853475.9250488"	"HCD"	"MS2"	"11.11932"	"1201.4"	"78.722"	"46.4700"	"13403"	"13403"	"13384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1442.4"	""	"1139.2"	""	"1282.3"	""	"2570.6"	"2.1"	"2535.7"	"2441.5"	""	"487"	"40"	"33.000"	"26.000"	"0.00271956200834567"	"17"	"0"	"2.465E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"954.08228"	"1907.15727"	"1907.15691"	"0.19"	"0.00018"	"9/100"	"9"	"100"	"1048583.83306885"	"HCD"	"MS2"	"0"	"103.5"	"100.000"	"46.6058"	"13459"	"13459"	"13432"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.8"	""	"92.8"	""	"97.2"	""	"222.3"	""	"239.2"	"224.3"	""	"481"	"24"	"33.000"	"26.000"	"0.100719852410859"	"14"	"0.0001889"	"0.0003766"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"954.08228"	"1907.15727"	"1907.15691"	"0.19"	"0.00018"	"17/100"	"17"	"100"	"1065642.61279297"	"HCD"	"MS2"	"0"	"104.8"	"100.000"	"46.8677"	"13614"	"13614"	"13586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.8"	""	"101.8"	""	"107.8"	""	"220.8"	""	"222.9"	"224.5"	""	"481"	"23"	"33.000"	"26.000"	"0.114318121839245"	"14"	"7.476E-05"	"0.0001948"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.5957"	"0.0000"	"1"	"1"	"1"	"636.39063"	"1907.15732"	"1907.15691"	"0.22"	"0.00014"	"7/100"	"7"	"100"	"49587259.6318359"	"HCD"	"MS2"	"5.996476"	"516.1"	"21.033"	"47.0791"	"13700"	"13700"	"13682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"579.8"	""	"491.5"	""	"549.1"	""	"1029.1"	"1.5"	"1147.7"	"1109.7"	""	"487"	"47"	"33.000"	"26.000"	"0.000468272835989624"	"15"	"0"	"1.383E-05"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"954.08240"	"1907.15752"	"1907.15691"	"0.32"	"0.00030"	"6/100"	"6"	"100"	"144685.918151855"	"HCD"	"MS2"	"100"	"12.1"	"100.000"	"47.1872"	"13745"	"13745"	"13714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.4"	""	"8.9"	""	"14.3"	""	"26.1"	""	"24.7"	"26.2"	""	"487"	"6"	"33.000"	"26.000"	"6.18726853801256"	"13"	"0.007192"	"0.2665"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"636.39075"	"1907.15769"	"1907.15691"	"0.41"	"0.00026"	"8/100"	"8"	"100"	"10971101.2012329"	"HCD"	"MS2"	"24.11189"	"455.6"	"69.736"	"43.7358"	"12291"	"12291"	"12280"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"524.1"	""	"467.1"	""	"500.0"	""	"895.3"	""	"975.4"	"968.9"	""	"487"	"56"	"33.000"	"26.000"	"6.58413861660504E-05"	"16"	"0"	"6.31E-06"	"1.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFNDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.8621"	"0.0000"	"1"	"1"	"1"	"477.54489"	"1907.15774"	"1907.15691"	"0.43"	"0.00021"	"8/100"	"8"	"100"	"16303560.7554321"	"HCD"	"MS2"	"6.273797"	"450.3"	"100.000"	"46.5575"	"13439"	"13439"	"13416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"516.2"	""	"416.7"	""	"503.4"	""	"928.6"	"5.0"	"979.1"	"930.7"	""	"487"	"29"	"33.000"	"26.000"	"0.032025724663881"	"15"	"0"	"8.683E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.6731"	"0.0000"	"1"	"1"	"1"	"636.39081"	"1907.15787"	"1907.15691"	"0.50"	"0.00032"	"9/100"	"9"	"100"	"50630734.8477783"	"HCD"	"MS2"	"7.954736"	"1204.9"	"45.329"	"44.9722"	"12844"	"12844"	"12827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1390.6"	""	"1125.0"	""	"1278.5"	""	"2599.2"	"9.6"	"2571.1"	"2476.9"	""	"487"	"52"	"33.000"	"26.000"	"0.000169628556185972"	"22"	"0"	"1.862E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.5000"	"0.0000"	"1"	"1"	"1"	"477.54517"	"1907.15883"	"1907.15691"	"1.01"	"0.00048"	"9/100"	"9"	"100"	"21429939.8046875"	"HCD"	"MS2"	"19.92064"	"696.1"	"100.000"	"44.3186"	"12578"	"12578"	"12556"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"869.6"	""	"765.8"	""	"803.1"	""	"1469.5"	""	"1346.8"	"1350.9"	""	"479"	"22"	"33.000"	"26.000"	"0.158966465361257"	"15"	"0.0001889"	"0.0004675"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVINAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"636.39172"	"1907.16062"	"1907.15691"	"1.94"	"0.00124"	"8/100"	"8"	"100"	"8695617.01959229"	"HCD"	"MS2"	"21.68083"	"498.3"	"92.899"	"43.9333"	"12420"	"12420"	"12400"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"577.6"	""	"526.8"	""	"524.7"	""	"980.4"	""	"1098.6"	"1036.4"	""	"473"	"25"	"33.000"	"26.000"	"0.0784930392111923"	"14"	"0"	"6.615E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMEQISQFLQAAER"	"[K].qMEQISQFLQAAER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"954.49487"	"1907.98247"	"1907.98466"	"-1.15"	"-0.00110"	"7/150"	"7"	"150"	"153525.760986328"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"67.9774"	"22150"	"22150"	"22122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.0"	""	"13.4"	""	"14.3"	""	"18.9"	""	"32.0"	"31.2"	""	"1042"	"41"	"37.000"	"30.000"	"0.00387112970844182"	"24"	"0"	"0.0001234"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMEQISQFLQAAER"	"[K].qMEQISQFLQAAER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"954.49530"	"1907.98332"	"1907.98466"	"-0.70"	"-0.00067"	"4/150"	"4"	"150"	"183768.9296875"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"67.8562"	"22152"	"22152"	"22122"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.4"	""	"10.9"	""	"14.6"	""	"20.1"	""	"30.1"	"33.6"	""	"1054"	"8"	"37.000"	"30.000"	"8.7863928101441"	"14"	"0.0008125"	"0.007674"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPPFFTLQPNVDTR"	"[R].fPPFFTLQPNVDTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"636.67853"	"1908.02103"	"1908.02170"	"-0.35"	"-0.00022"	"10/130"	"10"	"130"	"2089452.16314697"	"HCD"	"MS2"	"24.67577"	"37.4"	"100.000"	"77.0441"	"25839"	"25839"	"25817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.2"	""	"46.2"	""	"45.1"	""	"55.1"	""	"73.2"	"89.7"	""	"1176"	"28"	"37.000"	"30.000"	"0.0984866411103544"	"18"	"0"	"3.005E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPPFFTLQPNVDTR"	"[R].fPPFFTLQPNVDTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"954.51447"	"1908.02165"	"1908.02170"	"-0.02"	"-0.00002"	"7/130"	"7"	"130"	"259665.085998535"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"77.0878"	"25857"	"25857"	"25833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.5"	""	"14.1"	""	"15.8"	""	"17.7"	""	"19.5"	"25.1"	""	"1159"	"29"	"37.000"	"30.000"	"0.0660774751891697"	"19"	"0.0003839"	"0.001616"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPPFFTLQPNVDTR"	"[R].fPPFFTLQPNVDTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"954.51483"	"1908.02239"	"1908.02170"	"0.36"	"0.00034"	"7/130"	"7"	"130"	"255486.197692871"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"77.0083"	"25876"	"25876"	"25845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.6"	""	"10.2"	""	"11.0"	""	"18.9"	""	"17.5"	"22.6"	""	"1159"	"29"	"37.000"	"30.000"	"0.0746540615206171"	"20"	"0.0003146"	"0.001423"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPPFFTLQPNVDTR"	"[R].fPPFFTLQPNVDTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"636.67902"	"1908.02250"	"1908.02170"	"0.42"	"0.00027"	"12/130"	"12"	"130"	"2221706.6973877"	"HCD"	"MS2"	"28.37164"	"34.8"	"100.000"	"77.0224"	"25881"	"25881"	"25861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.0"	""	"35.3"	""	"42.5"	""	"59.7"	""	"74.1"	"77.5"	""	"1159"	"28"	"37.000"	"30.000"	"0.0887265184044737"	"21"	"7.476E-05"	"0.0001968"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPPFFTLQPNVDTR"	"[R].fPPFFTLQPNVDTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"954.51495"	"1908.02263"	"1908.02170"	"0.49"	"0.00047"	"8/130"	"8"	"130"	"158311.59777832"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"77.3517"	"26016"	"26016"	"25989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"8.5"	""	"9.8"	""	"15.0"	""	"14.7"	"13.1"	""	"1161"	"46"	"37.000"	"30.000"	"0.00146488058842497"	"17"	"0.0001889"	"0.0006318"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPPFFTLQPNVDTR"	"[R].fPPFFTLQPNVDTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.67914"	"1908.02286"	"1908.02170"	"0.61"	"0.00039"	"13/130"	"13"	"130"	"2105934.34820557"	"HCD"	"MS2"	"27.44397"	"46.9"	"100.000"	"77.3310"	"26007"	"26007"	"25989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.0"	""	"58.3"	""	"62.7"	""	"79.3"	""	"95.6"	"94.3"	""	"1152"	"13"	"37.000"	"30.000"	"2.67560798528304"	"13"	"0.001058"	"0.01345"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPPFFTLQPNVDTR"	"[R].fPPFFTLQPNVDTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"P0C0A1"	"Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"636.67938"	"1908.02359"	"1908.02170"	"0.99"	"0.00063"	"11/130"	"11"	"130"	"1902685.02386475"	"HCD"	"MS2"	"19.33672"	"43.4"	"100.000"	"77.3483"	"25963"	"25963"	"25945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.5"	""	"46.9"	""	"51.3"	""	"79.7"	""	"85.6"	"91.0"	""	"1155"	"13"	"37.000"	"30.000"	"2.67640596147706"	"17"	"0.0006037"	"0.003699"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EQLLPFDLSIFK"	"[R].eQLLPFDLSIFk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"3"	"954.56549"	"1908.12370"	"1908.12466"	"-0.50"	"-0.00048"	"3/124"	"3"	"124"	"64356.0809936523"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"92.0055"	"31742"	"31742"	"31734"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	"4.1"	""	"4.7"	""	"5.1"	""	"3.7"	"6.3"	""	"675"	"0"	"35.000"	"28.000"	"31.7887738826459"	"13"	"0.008341"	"0.3515"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLLPFDLSIFK"	"[R].eQLLPFDLSIFk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"636.71289"	"1908.12412"	"1908.12466"	"-0.28"	"-0.00018"	"7/124"	"7"	"124"	"200045.813293457"	"HCD"	"MS2"	"45.30448"	"8.4"	"100.000"	"92.1326"	"31809"	"31809"	"31797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.4"	""	"10.5"	""	"13.6"	""	"17.4"	""	"15.4"	"16.0"	""	"671"	"9"	"35.000"	"28.000"	"4.19461904638045"	"14"	"0.004167"	"0.1067"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLLPFDLSIFK"	"[R].eQLLPFDLSIFk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.71344"	"1908.12577"	"1908.12466"	"0.58"	"0.00037"	"8/124"	"8"	"124"	"203730.713989258"	"HCD"	"MS2"	"37.30301"	"7.8"	"100.000"	"91.9380"	"31719"	"31719"	"31713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.9"	""	"13.1"	""	"10.0"	""	"14.1"	""	"13.7"	"13.7"	""	"656"	"8"	"35.000"	"28.000"	"4.85147551319173"	"13"	"0.002953"	"0.05211"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"636.71759"	"1908.13822"	"1908.14093"	"-1.42"	"-0.00090"	"8/100"	"8"	"100"	"5622387.58691406"	"HCD"	"MS2"	"45.72881"	"345.9"	"100.000"	"47.4969"	"13823"	"13823"	"13800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.6"	""	"349.4"	""	"389.5"	""	"632.9"	""	"785.3"	"764.7"	""	"567"	"35"	"34.000"	"27.000"	"0.00971746674859187"	"15"	"0"	"1.124E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVINAFNDGLK"	"[K].kVInAFnDGLk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); N7(Deamidated); K11(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.72083"	"1908.14792"	"1908.14093"	"3.67"	"0.00233"	"6/100"	"6"	"100"	"8054520.18426514"	"HCD"	"MS2"	"44.47079"	"462.7"	"100.000"	"47.7493"	"13974"	"13974"	"13954"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"502.4"	""	"486.1"	""	"523.3"	""	"900.0"	""	"994.1"	"999.1"	""	"512"	"30"	"34.000"	"27.000"	"0.0243915817990055"	"14"	"0"	"1.829E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLGLVMDGFNSLLR"	"[R].tQLGLVmDGFNSLLR.[Y]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"637.01831"	"1909.04038"	"1909.04145"	"-0.56"	"-0.00036"	"15/160"	"15"	"160"	"1218292.95928955"	"HCD"	"MS2"	"49.41207"	"44.3"	"100.000"	"71.4551"	"23621"	"23621"	"23594"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.0"	""	"52.3"	""	"54.2"	""	"87.6"	""	"89.9"	"87.5"	""	"1155"	"24"	"37.000"	"30.000"	"0.242969627892016"	"16"	"0"	"0.0001356"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSFTGSTQVGK"	"[R].vNLLSFTGSTQVGk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.04266"	"1909.11344"	"1909.11588"	"-1.28"	"-0.00082"	"12/138"	"12"	"138"	"3247551.06262207"	"HCD"	"MS2"	"47.34677"	"96.3"	"100.000"	"62.3485"	"19859"	"19859"	"19833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.7"	""	"132.6"	""	"129.4"	""	"163.8"	"1.2"	"173.6"	"177.5"	""	"686"	"56"	"35.000"	"28.000"	"9.25324625328607E-05"	"16"	"0"	"1.912E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSFTGSTQVGK"	"[R].vNLLSFTGSTQVGk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9661"	"0.0000"	"1"	"1"	"1"	"637.04315"	"1909.11490"	"1909.11588"	"-0.51"	"-0.00033"	"14/138"	"14"	"138"	"3155928.19677734"	"HCD"	"MS2"	"8.55035"	"94.1"	"100.000"	"62.5914"	"20011"	"20011"	"19987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.0"	""	"132.3"	""	"129.2"	""	"141.2"	"3.8"	"168.0"	"172.4"	""	"686"	"59"	"35.000"	"28.000"	"4.13327327547526E-05"	"18"	"0"	"1.587E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLLSFTGSTQVGK"	"[R].vNLLSFTGSTQVGk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.04407"	"1909.11765"	"1909.11588"	"0.92"	"0.00059"	"11/138"	"11"	"138"	"1423798.89904785"	"HCD"	"MS2"	"41.57304"	"71.4"	"100.000"	"62.6690"	"19990"	"19990"	"19961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.4"	""	"95.3"	""	"108.0"	""	"114.7"	""	"125.9"	"133.6"	""	"657"	"15"	"35.000"	"28.000"	"0.95617057328488"	"14"	"0.0001889"	"0.001098"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHTMTDDVTFWK"	"[K].aHTMTDDVTFWk.[W]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"637.33392"	"1909.98722"	"1909.98824"	"-0.54"	"-0.00034"	"12/100"	"12"	"100"	"11130028.2738647"	"HCD"	"MS2"	"13.00536"	"243.3"	"64.802"	"46.6908"	"13541"	"13541"	"13522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"337.7"	""	"334.6"	""	"334.2"	""	"316.8"	""	"480.8"	"510.4"	""	"1198"	"36"	"37.000"	"30.000"	"0.0162714712203461"	"18"	"0"	"9.237E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHTMTDDVTFWK"	"[K].aHTMTDDVTFWk.[W]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"637.33405"	"1909.98758"	"1909.98824"	"-0.34"	"-0.00022"	"12/100"	"12"	"100"	"11727048.3463745"	"HCD"	"MS2"	"16.68816"	"407.8"	"100.000"	"46.3989"	"13374"	"13374"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"556.3"	""	"539.1"	""	"560.5"	""	"570.1"	""	"815.3"	"831.6"	""	"1230"	"38"	"37.000"	"30.000"	"0.00876748670065346"	"17"	"0"	"1.409E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDIPHMDIEALK"	"[K].aVDIPHMDIEALk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"637.36475"	"1910.07969"	"1910.08214"	"-1.29"	"-0.00082"	"7/110"	"7"	"110"	"2172970.37261963"	"HCD"	"MS2"	"5.607893"	"90.0"	"100.000"	"59.1478"	"18605"	"18605"	"18581"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.3"	""	"116.3"	""	"134.5"	""	"132.4"	""	"172.7"	"182.0"	""	"986"	"32"	"36.000"	"29.000"	"0.0294338396285832"	"20"	"0"	"5.157E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDIPHMDIEALK"	"[K].aVDIPHMDIEALk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"637.36536"	"1910.08152"	"1910.08214"	"-0.33"	"-0.00021"	"15/110"	"15"	"110"	"5816055.60992432"	"HCD"	"MS2"	"8.600265"	"191.5"	"100.000"	"58.8501"	"18431"	"18431"	"18409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.7"	""	"234.6"	""	"265.1"	""	"228.0"	"4.1"	"419.1"	"403.6"	""	"942"	"48"	"36.000"	"29.000"	"0.000719483613430132"	"18"	"0"	"8.474E-06"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].sFNTVPYIVGINk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"955.55981"	"1910.11235"	"1910.11516"	"-1.47"	"-0.00140"	"17/122"	"17"	"122"	"2250490.79577637"	"HCD"	"MS2"	"0"	"131.2"	"100.000"	"64.1398"	"20644"	"20644"	"20627"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.7"	""	"195.7"	""	"232.9"	""	"203.4"	""	"188.8"	"210.7"	""	"716"	"64"	"35.000"	"28.000"	"1.28198524482744E-05"	"17"	"0"	"1.065E-05"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].sFNTVPYIVGINk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"955.56036"	"1910.11345"	"1910.11516"	"-0.89"	"-0.00085"	"22/122"	"22"	"122"	"5690826.53796387"	"HCD"	"MS2"	"0"	"305.1"	"100.000"	"63.8426"	"20522"	"20522"	"20499"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"536.0"	""	"474.2"	""	"520.1"	""	"510.1"	"7.7"	"384.0"	"444.2"	""	"705"	"70"	"35.000"	"28.000"	"3.82084237192474E-06"	"17"	"0"	"5.803E-06"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].sFNTVPYIVGINk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"955.56042"	"1910.11357"	"1910.11516"	"-0.83"	"-0.00079"	"11/122"	"11"	"122"	"7866919.79998779"	"HCD"	"MS2"	"0"	"421.6"	"100.000"	"63.8535"	"20474"	"20474"	"20457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"667.8"	""	"657.3"	""	"741.8"	""	"712.8"	""	"553.3"	"647.0"	""	"705"	"46"	"35.000"	"28.000"	"0.000966404895604579"	"15"	"0"	"2.216E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].sFNTVPYIVGINk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"955.56055"	"1910.11382"	"1910.11516"	"-0.70"	"-0.00067"	"13/122"	"13"	"122"	"1123324.0279541"	"HCD"	"MS2"	"0"	"75.2"	"100.000"	"64.1764"	"20605"	"20605"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.4"	""	"116.5"	""	"114.5"	""	"132.4"	""	"108.8"	"125.8"	""	"705"	"41"	"35.000"	"28.000"	"0.00278714216369938"	"15"	"7.476E-05"	"0.0001979"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].sFNTVPYIVGINk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9322"	"0.0000"	"1"	"1"	"1"	"637.37677"	"1910.11576"	"1910.11516"	"0.31"	"0.00020"	"15/122"	"15"	"122"	"11752803.5314331"	"HCD"	"MS2"	"9.096988"	"190.8"	"75.562"	"64.1790"	"20660"	"20660"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"300.8"	""	"275.8"	""	"305.7"	""	"321.6"	""	"283.5"	"318.8"	""	"712"	"59"	"35.000"	"28.000"	"4.81337832497163E-05"	"21"	"0"	"3.806E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].sFNTVPYIVGINk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.37683"	"1910.11594"	"1910.11516"	"0.41"	"0.00026"	"10/122"	"10"	"122"	"46603777.2059326"	"HCD"	"MS2"	"0.5335175"	"421.5"	"40.252"	"63.8657"	"20532"	"20532"	"20515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"646.7"	""	"670.7"	""	"733.4"	""	"734.3"	""	"571.2"	"624.9"	""	"712"	"45"	"35.000"	"28.000"	"0.00120906597042186"	"15"	"0"	"3.49E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].sFNTVPYIVGINk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.37701"	"1910.11649"	"1910.11516"	"0.70"	"0.00044"	"15/122"	"15"	"122"	"15487298.4161377"	"HCD"	"MS2"	"8.692037"	"147.2"	"40.495"	"64.1321"	"20587"	"20587"	"20569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.1"	""	"199.3"	""	"250.4"	""	"225.7"	""	"224.4"	"258.1"	""	"710"	"53"	"35.000"	"28.000"	"0.000167968696931326"	"16"	"0"	"4.231E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].sFNTVPYIVGINk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.37738"	"1910.11759"	"1910.11516"	"1.27"	"0.00081"	"10/122"	"10"	"122"	"47268683.3046875"	"HCD"	"MS2"	"0.6153531"	"249.6"	"22.995"	"63.8144"	"20458"	"20458"	"20441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"395.6"	""	"398.0"	""	"432.0"	""	"440.3"	"1.4"	"317.3"	"369.9"	""	"699"	"45"	"35.000"	"28.000"	"0.00117070420985661"	"15"	"0"	"4.945E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAFENPYVDAIK"	"[K].vSAFENPYVDAIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"637.69122"	"1911.05912"	"1911.06279"	"-1.92"	"-0.00122"	"13/126"	"13"	"126"	"5010236.61151123"	"HCD"	"MS2"	"27.73971"	"143.2"	"100.000"	"61.5443"	"19584"	"19584"	"19555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.8"	""	"189.0"	""	"162.2"	""	"245.8"	""	"313.2"	"299.4"	""	"1078"	"38"	"37.000"	"30.000"	"0.00945341590492708"	"21"	"0"	"0.0001541"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAFENPYVDAIK"	"[K].vSAFENPYVDAIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.9818"	"0.0000"	"1"	"1"	"1"	"956.03406"	"1911.06084"	"1911.06279"	"-1.02"	"-0.00097"	"10/126"	"10"	"126"	"1094320.44494629"	"HCD"	"MS2"	"0"	"77.8"	"100.000"	"61.5767"	"19597"	"19597"	"19571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.3"	""	"95.6"	""	"88.5"	""	"132.4"	""	"185.5"	"169.3"	""	"1067"	"55"	"37.000"	"30.000"	"0.000181607769205484"	"17"	"0"	"4.473E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAFENPYVDAIK"	"[K].vSAFENPYVDAIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.9506"	"0.0000"	"1"	"1"	"1"	"956.03479"	"1911.06230"	"1911.06279"	"-0.25"	"-0.00024"	"11/126"	"11"	"126"	"954396.438781738"	"HCD"	"MS2"	"0"	"71.3"	"100.000"	"61.4202"	"19480"	"19480"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.7"	""	"83.9"	""	"80.0"	""	"119.9"	"2.2"	"167.0"	"147.5"	""	"1084"	"81"	"37.000"	"30.000"	"4.07379608557868E-07"	"22"	"0"	"9.897E-07"	"1.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAFENPYVDAIK"	"[K].vSAFENPYVDAIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"637.69287"	"1911.06406"	"1911.06279"	"0.67"	"0.00042"	"13/126"	"13"	"126"	"4792875.67956543"	"HCD"	"MS2"	"19.61345"	"143.4"	"100.000"	"61.3996"	"19471"	"19471"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.7"	""	"184.3"	""	"161.8"	""	"234.4"	"0.7"	"309.6"	"314.9"	""	"1076"	"33"	"37.000"	"30.000"	"0.0290925825744723"	"17"	"0"	"0.0001052"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAFENPYVDAIK"	"[K].vSAFENPYVDAIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.69299"	"1911.06443"	"1911.06279"	"0.86"	"0.00055"	"11/126"	"11"	"126"	"2379071.56921387"	"HCD"	"MS2"	"35.99738"	"70.8"	"100.000"	"61.7200"	"19602"	"19602"	"19577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.6"	""	"104.1"	""	"99.0"	""	"106.3"	""	"128.2"	"127.9"	""	"1080"	"7"	"37.000"	"30.000"	"11.9782606669212"	"13"	"0.000523"	"0.002778"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DILLVNDHLLNFVR"	"[K].dILLVnDHLLNFVR.[E]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q6TRW4"	"Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus OX=10116 GN=Pds5b PE=1 SV=2"	"Q6TRW4"	"Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus OX=10116 GN=Pds5b PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"3"	"637.69830"	"1911.08036"	"1911.09011"	"-5.11"	"-0.00325"	"13/132"	"13"	"132"	"1717121.07666016"	"HCD"	"MS2"	"47.10632"	"44.5"	"100.000"	"70.3064"	"23100"	"23100"	"23075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.1"	""	"46.2"	""	"50.6"	""	"105.1"	"0.4"	"89.5"	"93.3"	""	"919"	"5"	"36.000"	"29.000"	"14.3974479032301"	"13"	"0.0004166"	"0.002426"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGINK"	"[K].sFnTVPYIVGINk.[Q]"	"N-Term(TMT6plex); N3(Deamidated); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"637.70447"	"1911.09885"	"1911.09917"	"-0.17"	"-0.00011"	"13/122"	"13"	"122"	"3108026.15643311"	"HCD"	"MS2"	"30.41973"	"102.5"	"100.000"	"65.2105"	"21028"	"21028"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.3"	""	"117.1"	""	"150.9"	""	"182.9"	"4.1"	"185.9"	"190.6"	""	"786"	"44"	"35.000"	"28.000"	"0.00161581840394077"	"20"	"0"	"6.441E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGLQILENVIK"	"[K].yYGLQILENVIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"637.71564"	"1911.13236"	"1911.13556"	"-1.67"	"-0.00107"	"10/102"	"10"	"102"	"455041.015441895"	"HCD"	"MS2"	"16.72368"	"14.0"	"100.000"	"85.4615"	"29323"	"29323"	"29298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.2"	""	"15.1"	""	"21.4"	""	"25.1"	""	"24.8"	"29.3"	""	"569"	"10"	"34.000"	"27.000"	"3.11230586204411"	"17"	"0.001587"	"0.02183"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGLQILENVIK"	"[K].yYGLQILENVIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.71588"	"1911.13309"	"1911.13556"	"-1.29"	"-0.00082"	"8/102"	"8"	"102"	"338720.129150391"	"HCD"	"MS2"	"22.178"	"13.4"	"100.000"	"85.4024"	"29248"	"29248"	"29227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.5"	""	"17.9"	""	"21.2"	""	"15.5"	"1.3"	"25.0"	"30.0"	""	"568"	"1"	"34.000"	"27.000"	"21.9947150575915"	"13"	"0.002132"	"0.03209"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGLQILENVIK"	"[K].yYGLQILENVIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.71600"	"1911.13346"	"1911.13556"	"-1.10"	"-0.00070"	"14/102"	"14"	"102"	"1477497.74755859"	"HCD"	"MS2"	"43.27609"	"34.7"	"100.000"	"85.1365"	"29190"	"29190"	"29170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.5"	""	"43.7"	""	"53.9"	""	"57.6"	"0.9"	"73.7"	"53.7"	""	"544"	"23"	"34.000"	"27.000"	"0.132607749308121"	"14"	"0"	"6.554E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGLQILENVIK"	"[K].yYGLQILENVIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"956.07037"	"1911.13347"	"1911.13556"	"-1.09"	"-0.00104"	"8/102"	"8"	"102"	"155292.60559082"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"85.1847"	"29210"	"29210"	"29186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"16.0"	""	"19.5"	""	"21.1"	""	"21.5"	"23.1"	""	"544"	"54"	"34.000"	"27.000"	"0.000107045620523972"	"24"	"0"	"7.526E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGLQILENVIK"	"[K].yYGLQILENVIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"637.71686"	"1911.13602"	"1911.13556"	"0.24"	"0.00015"	"13/102"	"13"	"102"	"1434851.46911621"	"HCD"	"MS2"	"41.32737"	"40.5"	"100.000"	"85.0839"	"29118"	"29118"	"29099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.5"	""	"60.3"	""	"64.5"	""	"60.0"	""	"80.2"	"70.1"	""	"532"	"19"	"34.000"	"27.000"	"0.325747909004503"	"22"	"0"	"0.0001714"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGLQILENVIK"	"[K].yYGLQILENVIk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"956.07184"	"1911.13640"	"1911.13556"	"0.44"	"0.00042"	"8/102"	"8"	"102"	"186711.798522949"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"85.0910"	"29121"	"29121"	"29099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.8"	""	"20.3"	""	"23.8"	""	"21.9"	""	"29.3"	"26.6"	""	"536"	"58"	"34.000"	"27.000"	"4.51996210804183E-05"	"24"	"0"	"0.0001464"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGMATAQAQHLLNK"	"[K].aGMATAQAQHLLNk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"638.03168"	"1912.08048"	"1912.08387"	"-1.77"	"-0.00113"	"9/118"	"9"	"118"	"2237434.10791016"	"HCD"	"MS2"	"0"	"162.7"	"100.000"	"39.0053"	"10413"	"10413"	"10382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"245.2"	""	"214.9"	""	"229.8"	""	"238.4"	""	"303.0"	"310.3"	""	"880"	"17"	"36.000"	"29.000"	"0.915066542325625"	"15"	"0.0001889"	"0.0004031"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NKPEWFFEK"	"[K].nkPEWFFEk.[N]"	"N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.03571"	"1912.09256"	"1912.09358"	"-0.53"	"-0.00034"	"7/88"	"7"	"88"	"4117504.57104492"	"HCD"	"MS2"	"3.875985"	"272.4"	"100.000"	"49.1571"	"14550"	"14550"	"14527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"431.1"	""	"329.4"	""	"386.6"	""	"414.1"	""	"506.5"	"513.5"	""	"823"	"4"	"36.000"	"29.000"	"16.2693364158035"	"13"	"0.0001308"	"0.0002866"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIKK"	"[K].vLIVEPEGIkk.[E]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"478.81607"	"1912.24245"	"1912.24500"	"-1.33"	"-0.00064"	"5/86"	"5"	"86"	"6905406.53015137"	"HCD"	"MS2"	"13.28049"	"240.6"	"100.000"	"47.1239"	"13671"	"13671"	"13640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"679.8"	""	"489.3"	""	"376.2"	""	"282.8"	"0.6"	"205.7"	"221.2"	""	"96"	"16"	"26.000"	"19.000"	"0.126835620351453"	"13"	"0.0005564"	"0.003407"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIKK"	"[K].vLIVEPEGIkk.[E]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.08575"	"1912.24271"	"1912.24500"	"-1.20"	"-0.00076"	"16/86"	"16"	"86"	"19112664.5854492"	"HCD"	"MS2"	"6.713848"	"906.1"	"99.301"	"47.3160"	"13797"	"13797"	"13778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2728.7"	""	"1980.9"	""	"1414.9"	""	"983.7"	""	"665.4"	"716.5"	""	"90"	"10"	"26.000"	"19.000"	"0.417073420520707"	"13"	"0"	"0.0001566"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIKK"	"[K].vLIVEPEGIkk.[E]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.08594"	"1912.24326"	"1912.24500"	"-0.91"	"-0.00058"	"10/86"	"10"	"86"	"51308537.8022461"	"HCD"	"MS2"	"11.76243"	"762.2"	"29.810"	"47.0895"	"13657"	"13657"	"13640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2444.8"	""	"1599.5"	""	"1194.1"	""	"811.7"	"1.1"	"490.7"	"588.2"	""	"90"	"22"	"26.000"	"19.000"	"0.0278107380062287"	"14"	"0"	"0.0001309"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIKK"	"[K].vLIVEPEGIkk.[E]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.08624"	"1912.24417"	"1912.24500"	"-0.43"	"-0.00027"	"8/86"	"8"	"86"	"2853098.04815674"	"HCD"	"MS2"	"6.296944"	"187.7"	"100.000"	"47.5429"	"13842"	"13842"	"13816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"378.3"	""	"310.2"	""	"266.1"	""	"272.1"	"5.1"	"266.4"	"272.1"	""	"89"	"4"	"26.000"	"19.000"	"1.6686298599924"	"13"	"0.0006396"	"0.006227"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIKK"	"[K].vLIVEPEGIkk.[E]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"478.81677"	"1912.24526"	"1912.24500"	"0.14"	"0.00007"	"5/86"	"5"	"86"	"6079077.39916992"	"HCD"	"MS2"	"10.15434"	"219.3"	"100.000"	"47.3783"	"13823"	"13823"	"13794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"598.4"	""	"459.6"	""	"327.2"	""	"260.7"	""	"183.7"	"229.5"	""	"89"	"21"	"26.000"	"19.000"	"0.0370988127155737"	"14"	"0.0006037"	"0.004641"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIKK"	"[K].vLIVEPEGIkk.[E]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.08667"	"1912.24546"	"1912.24500"	"0.24"	"0.00015"	"10/86"	"10"	"86"	"15640312.8721924"	"HCD"	"MS2"	"9.374128"	"315.0"	"39.995"	"47.6322"	"13926"	"13926"	"13906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"921.0"	""	"612.3"	""	"473.1"	""	"369.7"	"2.4"	"276.8"	"298.7"	""	"89"	"19"	"26.000"	"19.000"	"0.0549996607882807"	"14"	"0"	"8.658E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVNGLTLGGQk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"638.36414"	"1913.07785"	"1913.08967"	"-6.18"	"-0.00394"	"7/136"	"7"	"136"	"1659636.34484863"	"HCD"	"MS2"	"16.55265"	"63.0"	"100.000"	"67.3556"	"21948"	"21948"	"21925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.7"	""	"91.6"	""	"88.1"	""	"89.8"	""	"115.9"	"121.6"	""	"915"	"10"	"36.000"	"29.000"	"4.99333953925307"	"14"	"0.0003839"	"0.001846"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVNGLTLGGQk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"957.04694"	"1913.08660"	"1913.08967"	"-1.61"	"-0.00154"	"12/136"	"12"	"136"	"2819886.02252197"	"HCD"	"MS2"	"0"	"217.2"	"100.000"	"63.7613"	"20436"	"20436"	"20409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"392.9"	""	"359.1"	""	"347.9"	""	"317.4"	"1.1"	"313.9"	"316.9"	""	"871"	"78"	"36.000"	"29.000"	"6.68325696009092E-07"	"26"	"0"	"2.76E-06"	"1.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVNGLTLGGQk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"957.04736"	"1913.08745"	"1913.08967"	"-1.16"	"-0.00111"	"19/136"	"19"	"136"	"2771841.70098877"	"HCD"	"MS2"	"0"	"208.8"	"100.000"	"63.8034"	"20506"	"20506"	"20483"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"372.8"	""	"337.9"	""	"356.6"	""	"292.1"	""	"291.2"	"322.7"	""	"857"	"54"	"36.000"	"29.000"	"0.000163286705324232"	"16"	"0"	"7.432E-06"	"1.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVNGLTLGGQk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.36774"	"1913.08866"	"1913.08967"	"-0.53"	"-0.00034"	"13/136"	"13"	"136"	"18063260.1381226"	"HCD"	"MS2"	"15.04037"	"415.8"	"100.000"	"63.7873"	"20500"	"20500"	"20483"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"767.5"	""	"672.1"	""	"674.4"	""	"567.0"	""	"594.8"	"648.7"	""	"875"	"64"	"36.000"	"29.000"	"1.68258904644842E-05"	"17"	"0"	"5.274E-06"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVNGLTLGGQk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9851"	"0.0000"	"1"	"1"	"1"	"638.36798"	"1913.08939"	"1913.08967"	"-0.15"	"-0.00009"	"13/136"	"13"	"136"	"16259373.3116455"	"HCD"	"MS2"	"16.04251"	"413.8"	"99.233"	"63.7475"	"20430"	"20430"	"20409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"764.7"	""	"629.3"	""	"714.6"	""	"581.4"	""	"607.8"	"608.0"	""	"872"	"67"	"36.000"	"29.000"	"9.58266904534184E-06"	"17"	"0"	"3.91E-06"	"1.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVNGLTLGGQk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.36835"	"1913.09049"	"1913.08967"	"0.43"	"0.00027"	"6/136"	"6"	"136"	"1156237.49194336"	"HCD"	"MS2"	"32.94418"	"53.4"	"100.000"	"68.7270"	"22456"	"22456"	"22426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.1"	""	"66.3"	""	"69.2"	""	"99.1"	"2.1"	"93.6"	"92.6"	""	"874"	"3"	"36.000"	"29.000"	"21.8012521020025"	"13"	"0.0002277"	"0.001175"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVNGLTLGGQk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"638.37561"	"1913.11228"	"1913.08967"	"11.82"	"0.00754"	"6/136"	"6"	"136"	"1895822.92633057"	"HCD"	"MS2"	"33.72729"	"109.3"	"100.000"	"64.8557"	"20883"	"20883"	"20857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.8"	""	"147.1"	""	"157.7"	""	"158.8"	""	"192.6"	"215.4"	""	"737"	"0"	"35.000"	"28.000"	"36.5121571692985"	"13"	"0.005855"	"0.1911"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMLTTTFLDDVK"	"[R].gVmLTTTFLDDVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"638.69299"	"1914.06443"	"1914.06582"	"-0.73"	"-0.00047"	"13/108"	"13"	"108"	"2436109.96276855"	"HCD"	"MS2"	"16.94207"	"77.3"	"100.000"	"66.5584"	"21631"	"21631"	"21603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.5"	""	"92.3"	""	"87.4"	""	"203.3"	"0.0"	"144.4"	"121.0"	""	"1064"	"27"	"37.000"	"30.000"	"0.11773663855102"	"15"	"0"	"0.0001206"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMLTTTFLDDVK"	"[R].gVmLTTTFLDDVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.9787"	"0.0000"	"1"	"1"	"1"	"957.53772"	"1914.06816"	"1914.06582"	"1.22"	"0.00117"	"15/108"	"15"	"108"	"214747.674316406"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"66.5237"	"21617"	"21617"	"21587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.7"	""	"22.4"	""	"18.7"	""	"61.1"	""	"27.6"	"34.6"	""	"1040"	"47"	"37.000"	"30.000"	"0.000931115044098353"	"16"	"0.0001308"	"0.0002501"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMLTTTFLDDVK"	"[R].gVmLTTTFLDDVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"638.69434"	"1914.06845"	"1914.06582"	"1.38"	"0.00088"	"14/108"	"14"	"108"	"2437067.68328857"	"HCD"	"MS2"	"13.59157"	"72.1"	"100.000"	"66.6884"	"21631"	"21631"	"21609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.6"	""	"77.8"	""	"88.4"	""	"183.4"	"1.5"	"133.0"	"113.3"	""	"1037"	"46"	"37.000"	"30.000"	"0.00132053148596534"	"24"	"0"	"3.651E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMLTTTFLDDVK"	"[R].gVmLTTTFLDDVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"957.53827"	"1914.06926"	"1914.06582"	"1.80"	"0.00172"	"15/108"	"15"	"108"	"192811.864807129"	"HCD"	"MS2"	"0"	"18.7"	"100.000"	"66.6283"	"21607"	"21607"	"21577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.0"	""	"22.2"	""	"20.8"	""	"60.9"	""	"27.4"	"27.2"	""	"1033"	"58"	"37.000"	"30.000"	"8.81191553920114E-05"	"20"	"0.0001889"	"0.0004893"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"957.53851"	"1914.06975"	"1914.07368"	"-2.06"	"-0.00197"	"20/136"	"20"	"136"	"890426.007873535"	"HCD"	"MS2"	"0"	"76.9"	"100.000"	"67.1170"	"21854"	"21854"	"21843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.7"	""	"96.3"	""	"108.2"	""	"114.6"	"1.6"	"142.6"	"141.3"	""	"1033"	"70"	"37.000"	"30.000"	"4.79811138771838E-06"	"18"	"0"	"1.524E-06"	"1.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"638.69489"	"1914.07010"	"1914.07368"	"-1.87"	"-0.00119"	"12/136"	"12"	"136"	"2950510.45831299"	"HCD"	"MS2"	"57.29224"	"102.9"	"100.000"	"67.2971"	"21878"	"21878"	"21867"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.2"	""	"135.8"	""	"160.7"	""	"178.7"	""	"179.5"	"184.7"	""	"1024"	"50"	"37.000"	"30.000"	"0.000522721015658332"	"16"	"0"	"1.125E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"957.53894"	"1914.07060"	"1914.07368"	"-1.61"	"-0.00154"	"18/136"	"18"	"136"	"1898201.80200195"	"HCD"	"MS2"	"0"	"153.7"	"100.000"	"66.8214"	"21738"	"21738"	"21715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.6"	""	"218.5"	""	"222.7"	""	"237.8"	""	"269.0"	"259.9"	""	"1031"	"51"	"37.000"	"30.000"	"0.000431746344936408"	"16"	"0"	"7.362E-06"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"638.69513"	"1914.07083"	"1914.07368"	"-1.49"	"-0.00095"	"14/136"	"14"	"136"	"2619491.96966553"	"HCD"	"MS2"	"18.37889"	"89.9"	"100.000"	"65.8199"	"21330"	"21330"	"21299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.0"	""	"108.0"	""	"118.6"	""	"122.9"	""	"172.8"	"211.1"	""	"1031"	"33"	"37.000"	"30.000"	"0.0277478072887147"	"15"	"0"	"8.855E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.6379"	"0.0000"	"1"	"1"	"1"	"638.69531"	"1914.07138"	"1914.07368"	"-1.20"	"-0.00077"	"13/136"	"13"	"136"	"13279281.536377"	"HCD"	"MS2"	"3.6665"	"247.7"	"66.360"	"66.9879"	"21754"	"21754"	"21737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"394.4"	""	"365.9"	""	"352.6"	""	"370.1"	"1.6"	"433.8"	"425.7"	""	"1020"	"58"	"37.000"	"30.000"	"8.13898365090734E-05"	"21"	"0"	"6.691E-06"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"479.27332"	"1914.07143"	"1914.07368"	"-1.18"	"-0.00056"	"13/136"	"13"	"136"	"2417054.96948242"	"HCD"	"MS2"	"17.99082"	"60.8"	"100.000"	"65.4167"	"21165"	"21165"	"21139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.6"	""	"79.1"	""	"72.9"	""	"102.9"	""	"113.5"	"114.4"	""	"1020"	"20"	"37.000"	"30.000"	"0.503002537671917"	"14"	"0.0001308"	"0.0002872"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"638.69556"	"1914.07212"	"1914.07368"	"-0.82"	"-0.00052"	"14/136"	"14"	"136"	"8057983.20471191"	"HCD"	"MS2"	"30.3135"	"238.6"	"100.000"	"65.1748"	"21066"	"21066"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"376.4"	""	"345.1"	""	"346.6"	""	"381.6"	""	"407.1"	"404.5"	""	"1023"	"45"	"37.000"	"30.000"	"0.00161007326266282"	"15"	"0"	"1.55E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"957.53979"	"1914.07231"	"1914.07368"	"-0.72"	"-0.00069"	"19/136"	"19"	"136"	"2204377.42303467"	"HCD"	"MS2"	"0"	"174.8"	"100.000"	"65.2117"	"21081"	"21081"	"21059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"309.2"	""	"252.9"	""	"252.6"	""	"261.4"	""	"290.1"	"288.3"	""	"1023"	"57"	"37.000"	"30.000"	"0.000107113852116773"	"17"	"0"	"6.681E-06"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"957.53986"	"1914.07244"	"1914.07368"	"-0.65"	"-0.00062"	"13/136"	"13"	"136"	"2039005.24719238"	"HCD"	"MS2"	"0"	"152.4"	"100.000"	"65.5181"	"21206"	"21206"	"21187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"272.2"	""	"218.1"	""	"218.4"	""	"222.9"	"2.8"	"242.1"	"263.9"	""	"1012"	"91"	"37.000"	"30.000"	"3.95503669121695E-08"	"23"	"0"	"8.624E-08"	"1.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"638.69568"	"1914.07248"	"1914.07368"	"-0.63"	"-0.00040"	"13/136"	"13"	"136"	"13215856.6123047"	"HCD"	"MS2"	"5.269335"	"341.5"	"100.000"	"66.8512"	"21750"	"21750"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"530.4"	""	"507.5"	""	"499.9"	""	"491.7"	"5.3"	"601.1"	"596.7"	""	"1014"	"60"	"37.000"	"30.000"	"5.21204263150122E-05"	"20"	"0"	"8.102E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"957.54022"	"1914.07317"	"1914.07368"	"-0.27"	"-0.00026"	"18/136"	"18"	"136"	"834467.883483887"	"HCD"	"MS2"	"32.06908"	"53.8"	"100.000"	"66.0158"	"21410"	"21410"	"21379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.9"	""	"83.1"	""	"73.5"	""	"81.2"	""	"92.7"	"93.1"	""	"1032"	"25"	"37.000"	"30.000"	"0.174040251267976"	"17"	"0"	"8.977E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7439"	"0.0000"	"1"	"1"	"1"	"957.54028"	"1914.07329"	"1914.07368"	"-0.21"	"-0.00020"	"12/136"	"12"	"136"	"984362.179992676"	"HCD"	"MS2"	"0"	"90.7"	"100.000"	"67.2191"	"21846"	"21846"	"21835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.6"	""	"114.6"	""	"143.1"	""	"139.4"	"0.7"	"166.0"	"155.2"	""	"1032"	"82"	"37.000"	"30.000"	"3.27076771008574E-07"	"24"	"0"	"4.314E-07"	"1.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"638.69598"	"1914.07340"	"1914.07368"	"-0.15"	"-0.00010"	"13/136"	"13"	"136"	"2115587.33062744"	"HCD"	"MS2"	"7.582859"	"84.2"	"100.000"	"65.8765"	"21300"	"21300"	"21273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.7"	""	"83.2"	""	"107.7"	""	"135.4"	""	"164.2"	"194.8"	""	"1032"	"32"	"37.000"	"30.000"	"0.0314521038975927"	"15"	"0"	"7.548E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7159"	"0.0000"	"1"	"1"	"1"	"957.54034"	"1914.07341"	"1914.07368"	"-0.14"	"-0.00014"	"20/136"	"20"	"136"	"2217196.97717285"	"HCD"	"MS2"	"0"	"178.7"	"100.000"	"65.2679"	"21051"	"21051"	"21033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.2"	""	"289.7"	""	"253.4"	""	"269.5"	"1.6"	"283.1"	"276.4"	""	"1032"	"88"	"37.000"	"30.000"	"8.33009015322465E-08"	"20"	"0"	"1.466E-07"	"1.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.6078"	"0.0000"	"1"	"1"	"1"	"957.54047"	"1914.07366"	"1914.07368"	"-0.02"	"-0.00001"	"19/136"	"19"	"136"	"1668844.73016357"	"HCD"	"MS2"	"0"	"148.7"	"100.000"	"66.9303"	"21730"	"21730"	"21705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.0"	""	"239.3"	""	"215.4"	""	"241.5"	""	"231.2"	"256.5"	""	"1032"	"51"	"37.000"	"30.000"	"0.000449417212417337"	"16"	"0"	"1.042E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"638.69611"	"1914.07376"	"1914.07368"	"0.04"	"0.00003"	"13/136"	"13"	"136"	"4599334.65869141"	"HCD"	"MS2"	"5.549013"	"118.1"	"100.000"	"68.3108"	"22337"	"22337"	"22314"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.2"	""	"160.1"	""	"165.2"	""	"207.1"	"0.4"	"198.0"	"223.3"	""	"1027"	"62"	"37.000"	"30.000"	"3.43194601671483E-05"	"20"	"0"	"3.393E-06"	"1.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"957.54053"	"1914.07378"	"1914.07368"	"0.05"	"0.00005"	"12/136"	"12"	"136"	"276102.676818848"	"HCD"	"MS2"	"100"	"25.9"	"100.000"	"65.9592"	"21334"	"21334"	"21305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.6"	""	"34.1"	""	"40.1"	""	"40.8"	""	"44.6"	"49.6"	""	"1027"	"30"	"37.000"	"30.000"	"0.0538940037112967"	"16"	"0.0001859"	"0.0003202"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.6230"	"0.0000"	"1"	"1"	"1"	"957.54059"	"1914.07390"	"1914.07368"	"0.11"	"0.00011"	"19/136"	"19"	"136"	"2212374.72918701"	"HCD"	"MS2"	"0"	"171.3"	"100.000"	"65.5771"	"21178"	"21178"	"21161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"278.7"	""	"241.2"	""	"262.0"	""	"234.0"	""	"309.0"	"297.8"	""	"1020"	"61"	"37.000"	"30.000"	"4.49334925234087E-05"	"16"	"0"	"3.356E-06"	"1.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"638.69617"	"1914.07395"	"1914.07368"	"0.14"	"0.00009"	"13/136"	"13"	"136"	"4385490.71484375"	"HCD"	"MS2"	"1.138429"	"119.0"	"100.000"	"68.4299"	"22334"	"22334"	"22314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"158.5"	"3.2"	"163.8"	""	"172.1"	""	"202.8"	""	"214.3"	"214.5"	""	"1032"	"44"	"37.000"	"30.000"	"0.00222663843643127"	"15"	"0"	"9.588E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7258"	"0.0000"	"1"	"1"	"1"	"638.69641"	"1914.07468"	"1914.07368"	"0.52"	"0.00033"	"13/136"	"13"	"136"	"39359010.6687012"	"HCD"	"MS2"	"3.380616"	"165.4"	"18.082"	"65.4721"	"21188"	"21188"	"21171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"289.2"	""	"226.9"	""	"247.1"	""	"235.5"	"0.3"	"272.8"	"291.8"	""	"1028"	"62"	"37.000"	"30.000"	"3.16200912572872E-05"	"20"	"0"	"8.272E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"638.69647"	"1914.07486"	"1914.07368"	"0.62"	"0.00039"	"14/136"	"14"	"136"	"9878003.15301514"	"HCD"	"MS2"	"40.32292"	"287.8"	"100.000"	"65.2311"	"21036"	"21036"	"21017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"483.3"	""	"403.6"	""	"404.7"	""	"444.5"	""	"499.7"	"487.1"	""	"1025"	"56"	"37.000"	"30.000"	"0.000136991578443995"	"18"	"0"	"6.779E-06"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"4"	"4"	"0.8611"	"0.0000"	"1"	"1"	"1"	"479.27420"	"1914.07497"	"1914.07368"	"0.67"	"0.00032"	"13/136"	"13"	"136"	"1893961.91027832"	"HCD"	"MS2"	"11.5814"	"46.7"	"100.000"	"65.4455"	"21124"	"21124"	"21097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.0"	""	"65.3"	""	"65.9"	""	"73.8"	"0.1"	"79.7"	"91.7"	""	"1026"	"36"	"37.000"	"30.000"	"0.0122494718813446"	"15"	"0"	"0.0001676"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGQk.[C]"	"N-Term(TMT6plex); N6(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"638.69727"	"1914.07724"	"1914.07368"	"1.86"	"0.00119"	"13/136"	"13"	"136"	"37912731.5959473"	"HCD"	"MS2"	"3.47604"	"202.7"	"21.702"	"65.5378"	"21162"	"21162"	"21145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"344.4"	""	"289.4"	""	"293.3"	""	"283.2"	"0.6"	"345.7"	"360.7"	""	"1002"	"62"	"36.000"	"30.000"	"3.10339978613467E-05"	"20"	"0"	"1.853E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHSMIVDLDSVVK"	"[K].lHSMIVDLDSVVk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"0"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"638.70911"	"1914.11277"	"1914.11344"	"-0.35"	"-0.00022"	"13/110"	"13"	"110"	"1971150.84802246"	"HCD"	"MS2"	"9.470285"	"85.1"	"100.000"	"63.0560"	"20148"	"20148"	"20121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.0"	""	"118.2"	""	"127.4"	""	"133.4"	"1.1"	"153.6"	"164.5"	""	"758"	"43"	"35.000"	"28.000"	"0.00175646382580053"	"18"	"0"	"2.086E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNTVTPGGKPNK"	"[K].nNTVTPGGkPNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"638.71698"	"1914.13639"	"1914.13757"	"-0.62"	"-0.00039"	"8/114"	"8"	"114"	"2942618.12042236"	"HCD"	"MS2"	"23.42789"	"209.3"	"100.000"	"27.1612"	"5610"	"5610"	"5596"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"329.6"	""	"268.1"	""	"301.5"	""	"335.4"	""	"375.8"	"371.8"	""	"562"	"34"	"34.000"	"27.000"	"0.0111868114925533"	"21"	"0"	"5.107E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNTVTPGGKPNK"	"[K].nNTVTPGGkPNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"638.71704"	"1914.13657"	"1914.13757"	"-0.52"	"-0.00033"	"7/114"	"7"	"114"	"2521850.38916016"	"HCD"	"MS2"	"15.04599"	"176.7"	"100.000"	"27.1234"	"5558"	"5558"	"5544"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.3"	""	"220.1"	""	"242.7"	""	"288.3"	""	"330.7"	"313.3"	""	"561"	"19"	"34.000"	"27.000"	"0.358866455816186"	"16"	"0"	"5.137E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEPALLELEGK"	"[K].kEPALLELEGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.73364"	"1914.18637"	"1914.18788"	"-0.78"	"-0.00050"	"9/114"	"9"	"114"	"18782377.5869141"	"HCD"	"MS2"	"6.840808"	"463.9"	"57.499"	"45.9525"	"13240"	"13240"	"13227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"628.2"	""	"520.4"	""	"569.4"	""	"793.8"	""	"965.8"	"930.3"	""	"298"	"36"	"31.000"	"24.000"	"0.00389212041805482"	"15"	"0"	"3.398E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFFVNGLTLGGQK"	"[R].sSFFVnGLTLGGqk.[C]"	"N-Term(TMT6plex); N6(Deamidated); Q13(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"639.03015"	"1915.07590"	"1915.05770"	"9.50"	"0.00607"	"14/136"	"14"	"136"	"2046854.84057617"	"HCD"	"MS2"	"0"	"79.6"	"100.000"	"67.1834"	"21880"	"21880"	"21869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.9"	""	"104.6"	""	"110.2"	""	"128.3"	""	"156.4"	"148.3"	""	"1037"	"26"	"37.000"	"30.000"	"0.130842478053118"	"23"	"0.0004166"	"0.002474"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITAAQHSVTGSAVSK"	"[R].iTAAQHSVTGSAVSk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"639.03650"	"1915.09494"	"1915.10130"	"-3.32"	"-0.00212"	"13/156"	"13"	"156"	"949383.741577148"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"31.0572"	"7122"	"7122"	"7094"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.3"	""	"59.8"	""	"77.4"	""	"78.9"	"2.8"	"102.5"	"93.7"	""	"913"	"40"	"36.000"	"29.000"	"0.00427997056161664"	"15"	"0"	"2.235E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALSDLALHFLNK"	"[R].dALSDLALHFLNk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"639.03937"	"1915.10355"	"1915.10532"	"-0.92"	"-0.00059"	"13/106"	"13"	"106"	"3007896.19830322"	"HCD"	"MS2"	"18.56234"	"87.4"	"100.000"	"77.8492"	"26219"	"26219"	"26197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.2"	""	"93.8"	""	"110.0"	""	"199.3"	""	"164.1"	"162.6"	""	"854"	"36"	"36.000"	"29.000"	"0.00964779073884358"	"25"	"0"	"4.191E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALSDLALHFLNK"	"[R].dALSDLALHFLNk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"3"	"3"	"0.7959"	"0.0000"	"1"	"1"	"1"	"639.03949"	"1915.10392"	"1915.10532"	"-0.73"	"-0.00047"	"16/106"	"16"	"106"	"3275870.74066162"	"HCD"	"MS2"	"27.186"	"95.1"	"100.000"	"77.9034"	"26190"	"26190"	"26169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.1"	""	"100.2"	""	"114.0"	""	"183.2"	"1.5"	"196.3"	"191.0"	""	"855"	"49"	"36.000"	"29.000"	"0.000527152316205358"	"25"	"0"	"1.265E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALSDLALHFLNK"	"[R].dALSDLALHFLNk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"639.04004"	"1915.10556"	"1915.10532"	"0.13"	"0.00008"	"13/106"	"13"	"106"	"1237284.95556641"	"HCD"	"MS2"	"33.74075"	"52.4"	"100.000"	"78.2001"	"26311"	"26311"	"26289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.4"	""	"69.2"	""	"59.7"	""	"96.7"	"0.8"	"95.8"	"107.1"	""	"849"	"35"	"36.000"	"29.000"	"0.0131788554516049"	"25"	"0"	"3.128E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALSDLALHFLNK"	"[R].dALSDLALHFLNk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"639.04041"	"1915.10666"	"1915.10532"	"0.70"	"0.00045"	"12/106"	"12"	"106"	"1348458.7088623"	"HCD"	"MS2"	"11.01508"	"56.0"	"100.000"	"78.1463"	"26340"	"26340"	"26319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.8"	""	"66.1"	""	"68.9"	""	"103.8"	"0.2"	"108.2"	"108.0"	""	"843"	"28"	"36.000"	"29.000"	"0.0663433777372511"	"21"	"0"	"4.273E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFQEPLMLQIPK"	"[R].lFQEPLMLQIPk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P07154"	"Cathepsin L1 OS=Rattus norvegicus OX=10116 GN=Ctsl PE=1 SV=2"	"P07154"	"Cathepsin L1 OS=Rattus norvegicus OX=10116 GN=Ctsl PE=1 SV=2"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"639.05402"	"1915.14750"	"1915.14910"	"-0.84"	"-0.00053"	"10/106"	"10"	"106"	"472973.80291748"	"HCD"	"MS2"	"33.84163"	"22.8"	"100.000"	"80.0826"	"27130"	"27130"	"27103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.3"	""	"24.3"	""	"36.6"	""	"43.3"	""	"41.8"	"45.1"	""	"530"	"32"	"34.000"	"27.000"	"0.0158214350944717"	"16"	"0"	"0.0001503"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFFSFPAVVAPFK"	"[R].tFFSFPAVVAPFk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"639.37390"	"1916.10715"	"1916.10861"	"-0.76"	"-0.00049"	"13/102"	"13"	"102"	"1353712.92150879"	"HCD"	"MS2"	"6.410399"	"35.1"	"100.000"	"88.3108"	"30445"	"30445"	"30433"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.5"	""	"62.4"	""	"56.6"	""	"57.2"	""	"55.8"	"51.9"	""	"904"	"16"	"36.000"	"29.000"	"1.03785918894679"	"14"	"0.0001889"	"0.0004214"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFFSFPAVVAPFK"	"[R].tFFSFPAVVAPFk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"958.55725"	"1916.10723"	"1916.10861"	"-0.72"	"-0.00069"	"5/102"	"5"	"102"	"161062.563903809"	"HCD"	"MS2"	"4.645514"	"11.5"	"100.000"	"88.2199"	"30368"	"30368"	"30359"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.3"	""	"15.2"	""	"14.8"	""	"21.7"	""	"21.0"	"22.5"	""	"902"	"13"	"36.000"	"29.000"	"2.29179908594813"	"13"	"0.0006037"	"0.004214"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFFSFPAVVAPFK"	"[R].tFFSFPAVVAPFk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"958.55737"	"1916.10747"	"1916.10861"	"-0.60"	"-0.00057"	"11/102"	"11"	"102"	"162862.308837891"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"88.3156"	"30447"	"30447"	"30433"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.5"	""	"11.6"	""	"18.3"	""	"14.7"	""	"20.7"	"18.2"	""	"896"	"25"	"36.000"	"29.000"	"0.13940489190235"	"14"	"0.0001889"	"0.0005979"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFFSFPAVVAPFK"	"[R].tFFSFPAVVAPFk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"639.37427"	"1916.10825"	"1916.10861"	"-0.19"	"-0.00012"	"7/102"	"7"	"102"	"498911.671020508"	"HCD"	"MS2"	"19.47146"	"16.3"	"100.000"	"88.3334"	"30411"	"30411"	"30396"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.4"	""	"22.9"	""	"26.8"	""	"28.6"	""	"27.4"	"25.8"	""	"894"	"6"	"36.000"	"29.000"	"11.2281323488478"	"14"	"0.0006037"	"0.00413"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFFSFPAVVAPFK"	"[R].tFFSFPAVVAPFk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"639.37427"	"1916.10825"	"1916.10861"	"-0.19"	"-0.00012"	"7/102"	"7"	"102"	"789878.526123047"	"HCD"	"MS2"	"18.71729"	"22.9"	"100.000"	"88.0369"	"30342"	"30342"	"30336"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.3"	""	"37.2"	""	"37.2"	""	"39.4"	""	"36.4"	"33.9"	""	"894"	"8"	"36.000"	"29.000"	"6.89140102468454"	"15"	"0.001058"	"0.01419"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFFSFPAVVAPFK"	"[R].tFFSFPAVVAPFk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"958.55920"	"1916.11113"	"1916.10861"	"1.31"	"0.00126"	"9/102"	"9"	"102"	"108683.376159668"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"87.9575"	"30265"	"30265"	"30249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"11.0"	""	"9.5"	""	"12.7"	""	"10.3"	"13.2"	""	"875"	"18"	"36.000"	"29.000"	"0.676048817298056"	"14"	"0.0004166"	"0.002139"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFFSFPAVVAPFK"	"[R].tFFSFPAVVAPFk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"958.56018"	"1916.11308"	"1916.10861"	"2.33"	"0.00224"	"7/102"	"7"	"102"	"96712.7720947266"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"88.0394"	"30343"	"30343"	"30336"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"9.2"	""	"7.9"	""	"11.3"	""	"6.7"	"7.8"	""	"858"	"3"	"36.000"	"29.000"	"21.6998779999336"	"13"	"0.004819"	"0.1412"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQQVSQGLDVLTAK"	"[K].aQQVSQGLDVLTAk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"958.56299"	"1916.11870"	"1916.12170"	"-1.56"	"-0.00150"	"17/142"	"17"	"142"	"953516.836547852"	"HCD"	"MS2"	"0"	"68.8"	"100.000"	"51.5920"	"15489"	"15489"	"15458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.5"	""	"85.6"	""	"95.1"	""	"123.2"	""	"134.2"	"126.5"	""	"765"	"68"	"35.000"	"28.000"	"5.96528832331311E-06"	"21"	"0"	"3.87E-06"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQQVSQGLDVLTAK"	"[K].aQQVSQGLDVLTAk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"958.56433"	"1916.12139"	"1916.12170"	"-0.16"	"-0.00016"	"13/142"	"13"	"142"	"868299.921264648"	"HCD"	"MS2"	"0"	"63.7"	"100.000"	"51.7529"	"15605"	"15605"	"15574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.0"	""	"92.1"	""	"83.3"	""	"117.0"	"3.2"	"113.8"	"100.9"	""	"804"	"112"	"36.000"	"29.000"	"2.31326854809537E-10"	""	"0"	"6.389E-08"	"1.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLIMELINNVAK"	"[K].tVLIMELINNVAk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"639.39172"	"1916.16062"	"1916.16548"	"-2.54"	"-0.00162"	"9/114"	"9"	"114"	"142931.660217285"	"HCD"	"MS2"	"47.55958"	"6.5"	"100.000"	"94.2840"	"32521"	"32521"	"32513"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"7.3"	""	"10.0"	""	"10.9"	""	"14.5"	"11.4"	""	"488"	"21"	"33.000"	"26.000"	"0.188968678663814"	"21"	"0.0001889"	"0.0006859"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLIMELINNVAK"	"[K].tVLIMELINNVAk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"958.58575"	"1916.16423"	"1916.16548"	"-0.65"	"-0.00062"	"3/114"	"3"	"114"	"51243.2111206055"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"94.0042"	"32398"	"32398"	"32386"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"3.7"	""	"4.2"	""	"5.1"	""	"3.0"	"5.4"	""	"474"	"3"	"33.000"	"26.000"	"11.9329644282733"	"13"	"0.003137"	"0.06376"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLIMELINNVAK"	"[K].tVLIMELINNVAk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"958.58588"	"1916.16448"	"1916.16548"	"-0.52"	"-0.00050"	"6/114"	"6"	"114"	"92167.0263671875"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"93.9266"	"32392"	"32392"	"32380"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"6.0"	""	"6.8"	""	"9.8"	""	"6.6"	"5.2"	""	"474"	"25"	"33.000"	"26.000"	"0.0734088373914329"	"14"	"0.0007076"	"0.006921"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLIMELINNVAK"	"[K].tVLIMELINNVAk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"958.58740"	"1916.16753"	"1916.16548"	"1.07"	"0.00103"	"4/114"	"4"	"114"	"71718.0950927734"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"93.7131"	"32294"	"32294"	"32286"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	"6.1"	""	"6.7"	""	"5.0"	""	"6.6"	"6.9"	""	"470"	"11"	"33.000"	"26.000"	"1.82418072407742"	"13"	"0.002829"	"0.04759"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISPEAFKPLVK"	"[K].iSPEAFkPLVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"639.41034"	"1916.21646"	"1916.21878"	"-1.21"	"-0.00077"	"14/92"	"14"	"92"	"4115650.88891602"	"HCD"	"MS2"	"24.78143"	"270.8"	"100.000"	"53.3446"	"16196"	"16196"	"16185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.2"	""	"199.2"	""	"203.6"	""	"560.8"	"0.4"	"726.2"	"673.8"	""	"215"	"8"	"30.000"	"23.000"	"1.71557008327949"	"13"	"0"	"4.087E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISPEAFKPLVK"	"[K].iSPEAFkPLVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"Q01129"	"Decorin OS=Rattus norvegicus OX=10116 GN=Dcn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"639.41107"	"1916.21866"	"1916.21878"	"-0.06"	"-0.00004"	"6/92"	"6"	"92"	"3970960.72393799"	"HCD"	"MS2"	"37.32511"	"267.6"	"100.000"	"53.5096"	"16317"	"16317"	"16298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"210.0"	""	"182.5"	""	"206.3"	""	"579.9"	"1.1"	"707.1"	"667.9"	""	"197"	"10"	"29.000"	"22.000"	"0.904557607536327"	"13"	"0"	"8.561E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDEDSILNLLTAR"	"[K].gLGTDEDSILNLLTAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"639.68719"	"1917.04703"	"1917.04904"	"-1.05"	"-0.00067"	"15/150"	"15"	"150"	"1245018.10241699"	"HCD"	"MS2"	"16.90984"	"18.4"	"100.000"	"81.9962"	"27910"	"27910"	"27886"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.9"	""	"20.2"	""	"26.0"	""	"30.8"	""	"35.7"	"41.6"	""	"1181"	"40"	"37.000"	"30.000"	"0.00625489324717189"	"24"	"0"	"3.198E-06"	"1.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDEDSILNLLTAR"	"[K].gLGTDEDSILNLLTAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"959.02777"	"1917.04827"	"1917.04904"	"-0.40"	"-0.00039"	"12/150"	"12"	"150"	"547404.802001953"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"82.0102"	"27865"	"27865"	"27840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.5"	""	"32.0"	"2.4"	"45.4"	""	"68.3"	""	"71.2"	"73.9"	""	"1198"	"49"	"37.000"	"30.000"	"0.000798779337865832"	"16"	"0"	"7.016E-06"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDEDSILNLLTAR"	"[K].gLGTDEDSILNLLTAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"959.02795"	"1917.04863"	"1917.04904"	"-0.21"	"-0.00020"	"22/150"	"22"	"150"	"1309444.83331299"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"82.3308"	"28047"	"28047"	"28030"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.3"	""	"65.9"	""	"81.8"	""	"142.6"	"2.1"	"143.8"	"155.1"	""	"1195"	"90"	"37.000"	"30.000"	"5.94754736867538E-08"	"23"	"0"	"7.593E-08"	"1.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDEDSILNLLTAR"	"[K].gLGTDEDSILNLLTAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9540"	"0.0000"	"1"	"1"	"1"	"959.02808"	"1917.04888"	"1917.04904"	"-0.08"	"-0.00008"	"13/150"	"13"	"150"	"1941107.46148682"	"HCD"	"MS2"	"0"	"106.8"	"100.000"	"82.3079"	"27986"	"27986"	"27968"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.7"	""	"94.5"	""	"125.1"	""	"224.5"	"0.2"	"205.9"	"234.6"	""	"1195"	"87"	"37.000"	"30.000"	"1.17581205809984E-07"	"22"	"0"	"4.917E-08"	"1.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDEDSILNLLTAR"	"[K].gLGTDEDSILNLLTAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"639.68787"	"1917.04905"	"1917.04904"	"0.00"	"0.00000"	"19/150"	"19"	"150"	"8348459.11608887"	"HCD"	"MS2"	"2.31103"	"50.8"	"82.020"	"82.2916"	"28031"	"28031"	"28014"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.9"	"2.7"	"47.6"	""	"59.2"	""	"107.5"	"1.5"	"101.3"	"105.0"	""	"1195"	"70"	"37.000"	"30.000"	"5.60193299138213E-06"	"23"	"0"	"4.668E-07"	"1.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDEDSILNLLTAR"	"[K].gLGTDEDSILNLLTAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9551"	"0.0000"	"1"	"1"	"1"	"959.02844"	"1917.04961"	"1917.04904"	"0.30"	"0.00029"	"13/150"	"13"	"150"	"519537.34588623"	"HCD"	"MS2"	"0"	"32.8"	"100.000"	"82.0377"	"27927"	"27927"	"27902"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.6"	""	"33.1"	""	"37.5"	""	"70.0"	""	"63.2"	"69.3"	""	"1193"	"89"	"37.000"	"30.000"	"7.0731105828171E-08"	"22"	"0"	"3.711E-08"	"1.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDEDSILNLLTAR"	"[K].gLGTDEDSILNLLTAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"639.68817"	"1917.04996"	"1917.04904"	"0.48"	"0.00031"	"9/150"	"9"	"150"	"1952336.95605469"	"HCD"	"MS2"	"6.505366"	"23.4"	"100.000"	"81.9990"	"27860"	"27860"	"27840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.9"	""	"22.3"	""	"34.9"	""	"45.8"	""	"40.1"	"50.5"	""	"1190"	"50"	"37.000"	"30.000"	"0.000564308985664034"	"25"	"0"	"1.505E-06"	"1.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDEDSILNLLTAR"	"[K].gLGTDEDSILNLLTAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"639.68854"	"1917.05106"	"1917.04904"	"1.06"	"0.00067"	"19/150"	"19"	"150"	"8940973.31158447"	"HCD"	"MS2"	"2.501859"	"53.5"	"73.933"	"82.3035"	"27985"	"27985"	"27968"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.0"	"5.2"	"46.5"	""	"62.3"	""	"115.6"	"1.4"	"106.5"	"109.3"	""	"1155"	"69"	"37.000"	"30.000"	"7.89863396781602E-06"	"22"	"0"	"3.179E-07"	"1.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPNEGADGQWK"	"[R].kPNEGADGQWk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXS5"	"Plasminogen activator inhibitor 1 RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2"	"Q6AXS5"	"Plasminogen activator inhibitor 1 RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"639.69678"	"1917.07578"	"1917.07972"	"-2.06"	"-0.00131"	"6/106"	"6"	"106"	"678497.81854248"	"HCD"	"MS2"	"0"	"58.3"	"100.000"	"31.7868"	"7463"	"7463"	"7434"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"103.1"	""	"76.0"	""	"86.8"	""	"100.4"	""	"92.2"	"96.0"	""	"1079"	"6"	"37.000"	"30.000"	"12.4449010831448"	"13"	"0.0008731"	"0.009405"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWTQVLLGQAEDK"	"[R].aWTQVLLGQAEDk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8475"	"0.0000"	"1"	"1"	"1"	"639.69824"	"1917.08017"	"1917.08458"	"-2.30"	"-0.00147"	"13/132"	"13"	"132"	"2137973.22216797"	"HCD"	"MS2"	"29.51947"	"70.0"	"100.000"	"66.4555"	"21536"	"21536"	"21513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.4"	""	"78.7"	""	"82.3"	""	"125.7"	""	"146.7"	"155.5"	""	"1076"	"59"	"37.000"	"30.000"	"7.141382182586E-05"	"25"	"0"	"1.965E-05"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFVTPADVVSGNPK"	"[R].qFVTPADVVSGNPk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.5641"	"0.0000"	"1"	"1"	"1"	"639.69873"	"1917.08164"	"1917.08458"	"-1.54"	"-0.00098"	"13/142"	"13"	"142"	"4335373.55279541"	"HCD"	"MS2"	"0"	"158.0"	"100.000"	"48.1488"	"14090"	"14090"	"14064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.9"	""	"198.7"	""	"208.8"	""	"264.5"	"2.1"	"303.8"	"296.0"	""	"1060"	"39"	"37.000"	"30.000"	"0.0072322906239213"	""	"0.0001859"	"0.0003445"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFVTPADVVSGNPK"	"[R].qFVTPADVVSGNPk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"639.69891"	"1917.08219"	"1917.08458"	"-1.25"	"-0.00080"	"13/142"	"13"	"142"	"4498701.61090088"	"HCD"	"MS2"	"0"	"152.3"	"100.000"	"48.3893"	"14236"	"14236"	"14211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.3"	""	"179.8"	""	"196.6"	""	"259.2"	"5.8"	"314.6"	"295.4"	""	"1061"	"40"	"37.000"	"30.000"	"0.00547879925756422"	"25"	"0.0001308"	"0.0003055"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFVTPADVVSGNPK"	"[R].qFVTPADVVSGNPk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"959.04474"	"1917.08220"	"1917.08458"	"-1.24"	"-0.00119"	"16/142"	"16"	"142"	"386352.274658203"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"48.0456"	"14048"	"14048"	"14022"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.9"	""	"33.7"	""	"33.5"	""	"37.3"	"0.9"	"45.8"	"57.6"	""	"1061"	"55"	"37.000"	"30.000"	"0.000150551604458825"	"26"	"0"	"8.828E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFVTPADVVSGNPK"	"[R].qFVTPADVVSGNPk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8548"	"0.0000"	"1"	"1"	"1"	"959.04553"	"1917.08379"	"1917.08458"	"-0.41"	"-0.00040"	"16/142"	"16"	"142"	"380847.856262207"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"48.3228"	"14209"	"14209"	"14186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.0"	""	"28.9"	""	"31.0"	""	"45.2"	""	"44.6"	"47.8"	""	"1049"	"62"	"37.000"	"30.000"	"3.23404078476347E-05"	"25"	"0"	"5.183E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALESSIAPIVIFASNR"	"[R].aLESSIAPIVIFASNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"959.05084"	"1917.09441"	"1917.10068"	"-3.27"	"-0.00314"	"7/144"	"7"	"144"	"184966.527526855"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"76.8014"	"25791"	"25791"	"25774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.6"	""	"11.7"	""	"15.1"	""	"21.7"	""	"21.0"	"18.5"	""	"988"	"36"	"36.000"	"29.000"	"0.0114743197740041"	"22"	"0.0001889"	"0.0007783"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALESSIAPIVIFASNR"	"[R].aLESSIAPIVIFASNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"639.70483"	"1917.09995"	"1917.10068"	"-0.38"	"-0.00024"	"17/144"	"17"	"144"	"1725653.58148193"	"HCD"	"MS2"	"0"	"34.2"	"100.000"	"76.7074"	"25754"	"25754"	"25740"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.9"	""	"44.5"	""	"47.5"	""	"55.5"	""	"72.2"	"65.9"	""	"936"	"48"	"36.000"	"29.000"	"0.000757261457616955"	"23"	"0"	"6.836E-06"	"1.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALESSIAPIVIFASNR"	"[R].aLESSIAPIVIFASNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"639.70538"	"1917.10160"	"1917.10068"	"0.48"	"0.00031"	"17/144"	"17"	"144"	"1689042.36230469"	"HCD"	"MS2"	"0"	"29.7"	"100.000"	"76.7596"	"25725"	"25725"	"25716"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.4"	""	"40.9"	""	"44.1"	""	"51.2"	"1.2"	"57.0"	"49.9"	""	"926"	"43"	"36.000"	"29.000"	"0.00214082412907857"	"20"	"0"	"6.88E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPMEISLPIALSK"	"[K].gSPmEISLPIALSk.[N]"	"N-Term(TMT6plex); M4(Oxidation); K14(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"959.05981"	"1917.11235"	"1917.11311"	"-0.39"	"-0.00038"	"10/126"	"10"	"126"	"212712.00390625"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"62.5614"	"19999"	"19999"	"19971"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.7"	""	"21.8"	""	"26.1"	""	"40.9"	""	"27.0"	"36.8"	""	"864"	"24"	"36.000"	"29.000"	"0.159031716613574"	"14"	"0.0005564"	"0.003337"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIASGLIGPLILCK"	"[K].dIASGLIGPLILck.[K]"	"N-Term(TMT6plex); C13(Methylthio); K14(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"639.71436"	"1917.12851"	"1917.13173"	"-1.68"	"-0.00107"	"11/110"	"11"	"110"	"259188.92199707"	"HCD"	"MS2"	"11.51714"	"7.7"	"100.000"	"94.9297"	"32731"	"32731"	"32726"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"12.1"	""	"9.7"	""	"14.7"	""	"15.7"	"13.7"	""	"729"	"30"	"35.000"	"28.000"	"0.0336277285197911"	"21"	"0.0003839"	"0.001806"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIASGLIGPLILCK"	"[K].dIASGLIGPLILck.[K]"	"N-Term(TMT6plex); C13(Methylthio); K14(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"959.06891"	"1917.13054"	"1917.13173"	"-0.62"	"-0.00060"	"6/110"	"6"	"110"	"73387.1699829102"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"94.9369"	"32717"	"32717"	"32706"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.4"	""	"5.0"	""	"6.3"	""	"4.5"	""	"2.8"	"5.8"	""	"710"	"17"	"35.000"	"28.000"	"0.711587569714632"	"20"	"0.001217"	"0.01851"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIASGLIGPLILCK"	"[K].dIASGLIGPLILck.[K]"	"N-Term(TMT6plex); C13(Methylthio); K14(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"639.71509"	"1917.13071"	"1917.13173"	"-0.53"	"-0.00034"	"12/110"	"12"	"110"	"458241.751708984"	"HCD"	"MS2"	"19.52473"	"13.4"	"100.000"	"95.1795"	"32811"	"32811"	"32808"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.1"	""	"20.9"	""	"17.8"	""	"24.2"	""	"23.2"	"27.9"	""	"710"	"45"	"35.000"	"28.000"	"0.00109453172233852"	"23"	"0"	"1.665E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIASGLIGPLILCK"	"[K].dIASGLIGPLILck.[K]"	"N-Term(TMT6plex); C13(Methylthio); K14(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"639.71527"	"1917.13126"	"1917.13173"	"-0.25"	"-0.00016"	"8/110"	"8"	"110"	"451706.916503906"	"HCD"	"MS2"	"23.10314"	"13.2"	"100.000"	"95.0696"	"32756"	"32756"	"32751"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.9"	""	"16.9"	""	"19.2"	""	"24.6"	""	"26.6"	"19.2"	""	"701"	"40"	"35.000"	"28.000"	"0.00330132303581256"	"22"	"0"	"1.555E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIASGLIGPLILCK"	"[K].dIASGLIGPLILck.[K]"	"N-Term(TMT6plex); C13(Methylthio); K14(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"639.71576"	"1917.13272"	"1917.13173"	"0.52"	"0.00033"	"11/110"	"11"	"110"	"243678.915771484"	"HCD"	"MS2"	"17.72302"	"9.2"	"100.000"	"94.8133"	"32675"	"32675"	"32673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"14.0"	""	"14.9"	""	"17.9"	""	"17.0"	"13.1"	""	"694"	"38"	"35.000"	"28.000"	"0.00574552177323926"	"19"	"0"	"5.422E-05"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAAGVGDMVMATVK"	"[R].lPAAGVGDMVMATVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"959.54742"	"1918.08757"	"1918.09060"	"-1.58"	"-0.00151"	"18/122"	"18"	"122"	"684203.681640625"	"HCD"	"MS2"	"0"	"42.4"	"100.000"	"68.1101"	"22255"	"22255"	"22234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.5"	""	"85.1"	""	"65.9"	""	"46.8"	""	"66.3"	"67.9"	""	"1026"	"52"	"37.000"	"30.000"	"0.000295881195720224"	"16"	"0"	"2.596E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAAGVGDMVMATVK"	"[R].lPAAGVGDMVMATVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.9892"	"0.0000"	"1"	"1"	"1"	"959.54761"	"1918.08794"	"1918.09060"	"-1.39"	"-0.00133"	"13/122"	"13"	"122"	"665612.114685059"	"HCD"	"MS2"	"0"	"45.7"	"100.000"	"68.2704"	"22269"	"22269"	"22250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.8"	""	"86.4"	""	"74.8"	""	"47.9"	""	"84.4"	"66.0"	""	"1040"	"93"	"37.000"	"30.000"	"2.32810918171709E-08"	"20"	"0"	"1.103E-06"	"1.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAAGVGDMVMATVK"	"[R].lPAAGVGDMVMATVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"640.03455"	"1918.08908"	"1918.09060"	"-0.79"	"-0.00050"	"14/122"	"14"	"122"	"3516430.01757813"	"HCD"	"MS2"	"4.143187"	"88.4"	"100.000"	"68.0546"	"22233"	"22233"	"22202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.5"	""	"163.7"	""	"153.2"	""	"108.2"	""	"140.5"	"139.8"	""	"1042"	"48"	"37.000"	"30.000"	"0.000794031484728389"	"17"	"0"	"3.121E-06"	"1.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAAGVGDMVMATVK"	"[R].lPAAGVGDMVMATVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"640.03503"	"1918.09055"	"1918.09060"	"-0.02"	"-0.00002"	"15/122"	"15"	"122"	"3946572.17590332"	"HCD"	"MS2"	"13.88838"	"102.1"	"100.000"	"68.2060"	"22243"	"22243"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.6"	""	"179.7"	""	"154.0"	""	"123.2"	""	"172.2"	"168.2"	""	"1037"	"59"	"37.000"	"30.000"	"7.09167396071448E-05"	"24"	"0"	"7.119E-06"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALESSIAPIVIFASNR"	"[R].aLESSIAPIVIFASnR.[G]"	"N-Term(TMT6plex); N15(Deamidated)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"959.55518"	"1918.10307"	"1918.08469"	"9.58"	"0.00919"	"6/144"	"6"	"144"	"120316.218200684"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"76.9360"	"25795"	"25795"	"25773"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.3"	""	"13.0"	""	"15.9"	""	"14.4"	""	"14.9"	"18.9"	""	"898"	"20"	"36.000"	"29.000"	"0.460517714886882"	"16"	"0.002651"	"0.03941"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLVGTPAPFSIDTK"	"[K].gGLVGTPAPFSIDTk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"640.03961"	"1918.10428"	"1918.10498"	"-0.37"	"-0.00023"	"12/128"	"12"	"128"	"3020666.84423828"	"HCD"	"MS2"	"19.47831"	"108.5"	"100.000"	"57.8702"	"18034"	"18034"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.3"	""	"143.0"	""	"180.8"	""	"135.7"	"3.6"	"173.0"	"198.8"	""	"882"	"43"	"36.000"	"29.000"	"0.00220515229924848"	"17"	"0.0001889"	"0.0004752"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQGTLSVVTVYHAK"	"[K].gQGTLSVVTVYHAk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"640.04266"	"1918.11344"	"1918.11622"	"-1.45"	"-0.00093"	"13/138"	"13"	"138"	"17881335.9945068"	"HCD"	"MS2"	"10.38953"	"240.6"	"41.207"	"38.3763"	"10111"	"10111"	"10087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.3"	""	"328.5"	""	"286.9"	""	"428.5"	"4.0"	"450.3"	"407.2"	""	"815"	"50"	"36.000"	"29.000"	"0.000372501145899127"	"20"	"0"	"2.292E-06"	"1.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQGTLSVVTVYHAK"	"[K].gQGTLSVVTVYHAk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"640.04303"	"1918.11454"	"1918.11622"	"-0.88"	"-0.00056"	"11/138"	"11"	"138"	"16274546.713623"	"HCD"	"MS2"	"0"	"244.1"	"44.222"	"38.4853"	"10199"	"10199"	"10177"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"387.5"	""	"323.2"	""	"294.7"	""	"411.6"	"3.8"	"456.8"	"435.3"	""	"813"	"44"	"36.000"	"29.000"	"0.00165981830544239"	"19"	"0"	"2.005E-06"	"1.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISLDLPVAEVYK"	"[K].iISLDLPVAEVYk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.05957"	"1918.16416"	"1918.16652"	"-1.23"	"-0.00079"	"15/110"	"15"	"110"	"1974402.00048828"	"HCD"	"MS2"	"43.1415"	"64.8"	"100.000"	"79.4970"	"26840"	"26840"	"26817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.5"	""	"81.1"	""	"85.2"	""	"117.4"	""	"135.3"	"129.4"	""	"471"	"47"	"33.000"	"26.000"	"0.000454978538657485"	"15"	"0"	"2.159E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISLDLPVAEVYK"	"[K].iISLDLPVAEVYk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.05969"	"1918.16452"	"1918.16652"	"-1.04"	"-0.00067"	"13/110"	"13"	"110"	"1640877.96032715"	"HCD"	"MS2"	"18.0981"	"55.6"	"100.000"	"79.4016"	"26852"	"26852"	"26831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.3"	""	"68.4"	""	"76.7"	""	"92.8"	""	"122.9"	"108.9"	""	"458"	"35"	"33.000"	"26.000"	"0.00737624753203906"	"15"	"0"	"5.865E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYVSQFESSTLGK"	"[R].dYVSQFESSTLGk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"960.01196"	"1919.01665"	"1919.01623"	"0.22"	"0.00021"	"14/130"	"14"	"130"	"210376.277282715"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"56.1239"	"17321"	"17321"	"17291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.8"	""	"23.4"	""	"19.8"	""	"32.8"	""	"44.1"	"42.8"	""	"1222"	"32"	"37.000"	"30.000"	"0.0387294393577982"	"14"	"0"	"4.97E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLEVLLFTIQSK"	"[K].gNLEVLLFTIQSk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"640.72363"	"1920.15635"	"1920.15702"	"-0.35"	"-0.00022"	"11/134"	"11"	"134"	"488833.700073242"	"HCD"	"MS2"	"27.63995"	"14.9"	"100.000"	"84.0129"	"28733"	"28733"	"28709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.3"	""	"18.2"	""	"19.5"	""	"23.2"	""	"28.3"	"33.2"	""	"550"	"29"	"34.000"	"27.000"	"0.0356724299520588"	"17"	"0"	"0.0001047"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLEVLLFTIQSK"	"[K].gNLEVLLFTIQSk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"640.72394"	"1920.15726"	"1920.15702"	"0.13"	"0.00008"	"11/134"	"11"	"134"	"444247.722412109"	"HCD"	"MS2"	"35.83501"	"16.0"	"100.000"	"83.9421"	"28653"	"28653"	"28628"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.7"	""	"16.2"	""	"24.7"	""	"28.0"	""	"29.8"	"35.1"	""	"553"	"17"	"34.000"	"27.000"	"0.565841942054372"	"15"	"0.0001889"	"0.0004916"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLHGLQQYYVK"	"[K].lTLHGLQQYYVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"641.04773"	"1921.12864"	"1921.13114"	"-1.30"	"-0.00083"	"10/98"	"10"	"98"	"4901611.15008545"	"HCD"	"MS2"	"21.64288"	"224.2"	"100.000"	"50.2311"	"14933"	"14933"	"14918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"342.4"	""	"314.8"	""	"301.6"	""	"340.9"	"1.0"	"397.4"	"425.4"	""	"705"	"35"	"35.000"	"28.000"	"0.0108183025090788"	"17"	"0"	"9.968E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTLHGLQQYYVK"	"[K].lTLHGLQQYYVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"641.04785"	"1921.12900"	"1921.13114"	"-1.11"	"-0.00071"	"10/98"	"10"	"98"	"5226117.64550781"	"HCD"	"MS2"	"46.86115"	"227.3"	"100.000"	"50.4041"	"15053"	"15053"	"15038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.4"	""	"323.0"	""	"309.8"	""	"329.8"	"0.1"	"414.8"	"424.6"	""	"704"	"33"	"35.000"	"28.000"	"0.0194331258626827"	"17"	"0"	"9.952E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGAVFMDAPVSGGVGAAR"	"[K].mGAVFMDAPVSGGVGAAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"961.49426"	"1921.98125"	"1921.98255"	"-0.68"	"-0.00065"	"17/144"	"17"	"144"	"304873.74597168"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"56.2882"	"17442"	"17442"	"17413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.0"	"2.0"	"24.0"	""	"25.4"	""	"24.3"	""	"37.2"	"36.3"	""	"1072"	"36"	"37.000"	"30.000"	"0.0142286858121889"	"25"	"0"	"0.0001448"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMFEMPFTQTGK"	"[R].fMFEMPFTQTGk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63603"	"Dedicator of cytokinesis protein 9 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dock9 PE=2 SV=2"	"Q63603"	"Dedicator of cytokinesis protein 9 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dock9 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.33411"	"1921.98777"	"1921.99563"	"-4.09"	"-0.00262"	"10/106"	"10"	"106"	"883063.789367676"	"HCD"	"MS2"	"6.697977"	"39.9"	"100.000"	"77.2861"	"25938"	"25938"	"25913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.2"	""	"59.1"	""	"54.2"	""	"69.0"	"0.8"	"70.6"	"78.1"	""	"1091"	"8"	"37.000"	"30.000"	"8.72558904609301"	"13"	"0.0005564"	"0.00347"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLMAHDFTk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"961.51666"	"1922.02605"	"1922.02800"	"-1.01"	"-0.00097"	"7/124"	"7"	"124"	"334075.24597168"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"55.4714"	"17108"	"17108"	"17077"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.3"	""	"42.3"	""	"44.6"	""	"29.9"	""	"51.3"	"58.8"	""	"1239"	"49"	"37.000"	"30.000"	"0.000721176075219799"	"23"	"0"	"4.123E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLMAHDFTk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8039"	"0.0000"	"1"	"1"	"1"	"641.34698"	"1922.02640"	"1922.02800"	"-0.83"	"-0.00053"	"13/124"	"13"	"124"	"3668262.07617188"	"HCD"	"MS2"	"10.55133"	"127.9"	"100.000"	"55.6852"	"17195"	"17195"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.0"	""	"196.5"	""	"193.6"	""	"148.6"	"3.2"	"258.4"	"245.6"	""	"1233"	"51"	"37.000"	"30.000"	"0.000534481996404941"	"26"	"0"	"4.085E-06"	"1.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLMAHDFTk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"641.34717"	"1922.02695"	"1922.02800"	"-0.54"	"-0.00035"	"13/124"	"13"	"124"	"4023509.23925781"	"HCD"	"MS2"	"7.959858"	"141.1"	"100.000"	"55.4860"	"17060"	"17060"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.6"	""	"212.3"	""	"222.3"	""	"153.0"	"1.2"	"256.8"	"297.4"	""	"1240"	"51"	"37.000"	"30.000"	"0.000528922070690906"	"22"	"0"	"5.669E-06"	"1.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLMAHDFTk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8393"	"0.0000"	"1"	"1"	"1"	"641.34723"	"1922.02713"	"1922.02800"	"-0.45"	"-0.00029"	"16/124"	"16"	"124"	"26798108.7565918"	"HCD"	"MS2"	"4.168304"	"547.7"	"70.445"	"55.3264"	"17048"	"17048"	"17029"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"775.5"	""	"890.5"	""	"814.3"	""	"546.6"	""	"1053.9"	"1111.9"	""	"1239"	"56"	"37.000"	"30.000"	"0.000147584691126771"	"25"	"0"	"7.808E-07"	"1.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLMAHDFTk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"641.34747"	"1922.02787"	"1922.02800"	"-0.07"	"-0.00004"	"12/124"	"12"	"124"	"29898303.6885986"	"HCD"	"MS2"	"0"	"557.9"	"55.101"	"55.1643"	"16928"	"16928"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"751.9"	""	"888.2"	""	"811.9"	""	"579.6"	"1.3"	"1091.2"	"1171.5"	""	"1257"	"42"	"37.000"	"30.000"	"0.00411438835401282"	"16"	"0"	"6.254E-06"	"1.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLMAHDFTk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8393"	"0.0000"	"1"	"1"	"1"	"641.34747"	"1922.02787"	"1922.02800"	"-0.07"	"-0.00004"	"19/124"	"19"	"124"	"28556198.152832"	"HCD"	"MS2"	"3.669574"	"557.9"	"72.033"	"55.1624"	"16927"	"16927"	"16907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"751.9"	""	"888.2"	""	"811.9"	""	"579.6"	"1.3"	"1091.2"	"1171.5"	""	"1257"	"56"	"37.000"	"30.000"	"0.000175511380421767"	"25"	"0"	"7.817E-07"	"1.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLMAHDFTk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"961.51886"	"1922.03044"	"1922.02800"	"1.27"	"0.00122"	"9/124"	"9"	"124"	"218022.539245605"	"HCD"	"MS2"	"100"	"19.5"	"100.000"	"55.3391"	"17000"	"17000"	"16971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.3"	""	"25.9"	""	"34.4"	""	"19.1"	"0.6"	"32.2"	"44.1"	""	"1277"	"11"	"38.000"	"31.000"	"4.61488519599986"	"13"	"0.000523"	"0.002892"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYQEFTDHLVK"	"[K].sPYQEFTDHLVk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"641.35211"	"1922.04178"	"1922.04238"	"-0.31"	"-0.00020"	"12/118"	"12"	"118"	"3766215.97857666"	"HCD"	"MS2"	"20.6396"	"202.8"	"100.000"	"46.8384"	"13554"	"13554"	"13528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"293.4"	""	"303.9"	""	"340.4"	""	"334.1"	""	"340.0"	"307.3"	""	"1255"	"34"	"37.000"	"30.000"	"0.0264614555901435"	"20"	"0"	"1.791E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYQEFTDHLVK"	"[K].sPYQEFTDHLVk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"641.35248"	"1922.04288"	"1922.04238"	"0.26"	"0.00017"	"11/118"	"11"	"118"	"4089982.74420166"	"HCD"	"MS2"	"33.91735"	"207.4"	"100.000"	"47.1022"	"13710"	"13710"	"13682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"325.5"	""	"283.5"	""	"327.9"	""	"341.4"	"1.3"	"354.1"	"327.2"	""	"1241"	"27"	"37.000"	"30.000"	"0.124664209022372"	"15"	"0"	"3.051E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSDALISLQMVYPR"	"[K].sLSDALISLQMVYPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"641.35858"	"1922.06119"	"1922.06185"	"-0.34"	"-0.00022"	"8/136"	"8"	"136"	"518482.086303711"	"HCD"	"MS2"	"39.02774"	"16.1"	"100.000"	"82.7068"	"28200"	"28200"	"28173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.8"	""	"15.4"	""	"26.8"	""	"26.4"	""	"30.9"	"33.1"	""	"1163"	"35"	"37.000"	"30.000"	"0.0183886445938791"	"22"	"0"	"1.468E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSDALISLQMVYPR"	"[K].sLSDALISLQMVYPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"641.35864"	"1922.06137"	"1922.06185"	"-0.25"	"-0.00016"	"14/136"	"14"	"136"	"519246.790649414"	"HCD"	"MS2"	"34.35202"	"15.9"	"100.000"	"82.7099"	"28150"	"28150"	"28128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.4"	""	"18.1"	""	"26.6"	""	"27.6"	""	"29.5"	"27.4"	""	"1158"	"33"	"37.000"	"30.000"	"0.028358193641433"	"22"	"0"	"3.943E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGMANLLTGPk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.37714"	"1922.11686"	"1922.11853"	"-0.87"	"-0.00056"	"15/132"	"15"	"132"	"4706993.64752197"	"HCD"	"MS2"	"6.16414"	"126.4"	"100.000"	"66.8540"	"21751"	"21751"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.6"	""	"203.9"	""	"213.9"	""	"123.8"	""	"226.7"	"251.1"	""	"772"	"46"	"35.000"	"28.000"	"0.00100135323377786"	"15"	"0"	"5.872E-06"	"1.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGMANLLTGPk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.9846"	"0.0000"	"1"	"1"	"1"	"641.37714"	"1922.11686"	"1922.11853"	"-0.87"	"-0.00056"	"10/132"	"10"	"132"	"8584851.19946289"	"HCD"	"MS2"	"7.380534"	"195.9"	"100.000"	"66.5375"	"21622"	"21622"	"21603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"320.0"	""	"334.0"	""	"365.4"	""	"154.6"	""	"305.2"	"374.5"	""	"772"	"65"	"35.000"	"28.000"	"1.09040367031746E-05"	"17"	"0"	"3.06E-06"	"1.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGMANLLTGPk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"961.56219"	"1922.11711"	"1922.11853"	"-0.74"	"-0.00071"	"16/132"	"16"	"132"	"446701.65234375"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"66.9648"	"21744"	"21744"	"21721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.7"	""	"56.6"	""	"59.0"	""	"34.6"	"0.9"	"58.9"	"66.7"	""	"772"	"73"	"35.000"	"28.000"	"2.01644928953661E-06"	"17"	"0"	"8.128E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGMANLLTGPk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.37726"	"1922.11722"	"1922.11853"	"-0.68"	"-0.00043"	"13/132"	"13"	"132"	"8469384.93469238"	"HCD"	"MS2"	"5.681283"	"192.0"	"100.000"	"66.6448"	"21613"	"21613"	"21593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.9"	""	"332.4"	""	"345.3"	""	"179.0"	"1.2"	"288.0"	"346.3"	""	"761"	"56"	"35.000"	"28.000"	"0.000105524829982002"	"16"	"0"	"4.14E-06"	"1.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGMANLLTGPk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"961.56244"	"1922.11760"	"1922.11853"	"-0.48"	"-0.00046"	"13/132"	"13"	"132"	"1152182.89794922"	"HCD"	"MS2"	"0"	"80.0"	"100.000"	"66.6652"	"21622"	"21622"	"21593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.6"	""	"142.0"	""	"148.8"	""	"62.1"	""	"120.4"	"157.3"	""	"761"	"93"	"35.000"	"28.000"	"2.09100302502826E-08"	"18"	"0"	"3.45E-07"	"1.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGMANLLTGPk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.37750"	"1922.11795"	"1922.11853"	"-0.30"	"-0.00019"	"12/132"	"12"	"132"	"4619161.77020264"	"HCD"	"MS2"	"3.203767"	"110.7"	"85.908"	"66.9625"	"21743"	"21743"	"21721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.2"	""	"171.9"	""	"199.2"	""	"112.5"	""	"192.1"	"212.9"	""	"761"	"48"	"35.000"	"28.000"	"0.000619947140419413"	"15"	"0"	"7.12E-06"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGMANLLTGPk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"961.56299"	"1922.11870"	"1922.11853"	"0.09"	"0.00009"	"20/132"	"20"	"132"	"1816161.49371338"	"HCD"	"MS2"	"0"	"119.7"	"100.000"	"66.5907"	"21644"	"21644"	"21619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.0"	""	"202.0"	""	"212.0"	""	"104.0"	""	"186.8"	"224.2"	""	"739"	"61"	"35.000"	"28.000"	"2.72655613032703E-05"	"16"	"0"	"2.06E-06"	"1.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEHFTDLYDIK"	"[R].aLEHFTDLYDIk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"641.69299"	"1923.06443"	"1923.06279"	"0.85"	"0.00055"	"15/102"	"15"	"102"	"10113450.8370972"	"HCD"	"MS2"	"40.85667"	"303.3"	"100.000"	"57.3619"	"17880"	"17880"	"17861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"328.0"	""	"307.7"	""	"299.3"	""	"583.4"	""	"660.2"	"710.0"	""	"1129"	"47"	"37.000"	"30.000"	"0.0011472655326735"	"21"	"0"	"4.459E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEHFTDLYDIK"	"[R].aLEHFTDLYDIk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"641.69324"	"1923.06516"	"1923.06279"	"1.23"	"0.00079"	"11/102"	"11"	"102"	"9710902.57794189"	"HCD"	"MS2"	"34.71608"	"311.4"	"100.000"	"57.1676"	"17747"	"17747"	"17723"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"336.9"	""	"331.0"	""	"357.3"	""	"572.2"	""	"662.5"	"704.4"	""	"1127"	"36"	"37.000"	"30.000"	"0.013270702714754"	"20"	"0"	"6.707E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNVLPVSLAFDK"	"[R].fDNVLPVSLAFDk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"641.70404"	"1923.09757"	"1923.09917"	"-0.83"	"-0.00053"	"13/136"	"13"	"136"	"1126483.87786865"	"HCD"	"MS2"	"10.15146"	"38.3"	"100.000"	"80.9004"	"27412"	"27412"	"27392"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.9"	""	"39.0"	""	"46.3"	""	"72.1"	""	"69.5"	"75.1"	""	"892"	"38"	"36.000"	"29.000"	"0.00706862363837656"	"26"	"0"	"8.834E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNVLPVSLAFDK"	"[R].fDNVLPVSLAFDk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"962.05249"	"1923.09770"	"1923.09917"	"-0.76"	"-0.00073"	"11/136"	"11"	"136"	"164729.906738281"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"80.9162"	"27419"	"27419"	"27392"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.4"	""	"12.4"	""	"18.1"	""	"19.5"	""	"20.2"	"26.5"	""	"892"	"23"	"36.000"	"29.000"	"0.20860987301409"	"18"	"0.0001889"	"0.0004328"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNVLPVSLAFDK"	"[R].fDNVLPVSLAFDk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"641.70435"	"1923.09848"	"1923.09917"	"-0.36"	"-0.00023"	"14/136"	"14"	"136"	"1354093.00775146"	"HCD"	"MS2"	"11.19434"	"40.7"	"100.000"	"80.8855"	"27457"	"27457"	"27438"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.3"	""	"42.2"	""	"54.0"	""	"80.5"	""	"73.3"	"78.8"	""	"897"	"47"	"36.000"	"29.000"	"0.000928458394932781"	"26"	"0"	"1.508E-05"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDNVLPVSLAFDK"	"[R].fDNVLPVSLAFDk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"962.05328"	"1923.09929"	"1923.09917"	"0.06"	"0.00006"	"11/136"	"11"	"136"	"206857.726745605"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"80.8510"	"27443"	"27443"	"27422"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.5"	""	"15.3"	""	"20.6"	""	"17.6"	""	"25.2"	"21.5"	""	"898"	"16"	"36.000"	"29.000"	"1.01448666082922"	"23"	"0.0001889"	"0.0004403"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEAPSWLDLPIK"	"[K].vPEAPSWLDLPIk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63493"	"Antigen-presenting glycoprotein CD1d OS=Rattus norvegicus OX=10116 GN=Cd1d PE=2 SV=2"	"Q63493"	"Antigen-presenting glycoprotein CD1d OS=Rattus norvegicus OX=10116 GN=Cd1d PE=2 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"641.71619"	"1923.13401"	"1923.13556"	"-0.81"	"-0.00052"	"11/108"	"11"	"108"	"3335840.91741943"	"HCD"	"MS2"	"30.39256"	"73.0"	"100.000"	"79.0021"	"26689"	"26689"	"26671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.6"	""	"82.5"	""	"83.4"	""	"123.9"	"0.6"	"157.5"	"168.3"	""	"627"	"26"	"34.000"	"27.000"	"0.0705078618929517"	"16"	"0.0001308"	"0.0002481"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEAPSWLDLPIK"	"[K].vPEAPSWLDLPIk.[M]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63493"	"Antigen-presenting glycoprotein CD1d OS=Rattus norvegicus OX=10116 GN=Cd1d PE=2 SV=2"	"Q63493"	"Antigen-presenting glycoprotein CD1d OS=Rattus norvegicus OX=10116 GN=Cd1d PE=2 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"641.71667"	"1923.13547"	"1923.13556"	"-0.04"	"-0.00003"	"11/108"	"11"	"108"	"3076306.01690674"	"HCD"	"MS2"	"30.42323"	"72.0"	"100.000"	"79.0586"	"26661"	"26661"	"26641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.8"	""	"84.1"	""	"85.7"	""	"125.5"	""	"157.5"	"162.3"	""	"628"	"22"	"34.000"	"27.000"	"0.214254349960484"	"17"	"0"	"0.0001652"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KALAAAGYDVEK"	"[K].kALAAAGYDVEk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.72101"	"1923.14847"	"1923.15182"	"-1.74"	"-0.00112"	"14/114"	"14"	"114"	"7760345.3145752"	"HCD"	"MS2"	"0"	"427.2"	"100.000"	"37.2525"	"9693"	"9693"	"9670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"628.9"	""	"742.9"	""	"794.9"	""	"581.4"	""	"678.6"	"609.6"	""	"556"	"35"	"34.000"	"27.000"	"0.00829936368059192"	"15"	"0"	"2.158E-06"	"1.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KALAAAGYDVEK"	"[K].kALAAAGYDVEk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"1"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"641.72119"	"1923.14902"	"1923.15182"	"-1.46"	"-0.00093"	"10/114"	"10"	"114"	"6914407.53869629"	"HCD"	"MS2"	"38.89575"	"367.0"	"100.000"	"37.1430"	"9605"	"9605"	"9578"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"550.8"	""	"656.0"	""	"699.8"	""	"468.5"	""	"574.3"	"520.3"	""	"546"	"46"	"34.000"	"27.000"	"0.000693685548614959"	"19"	"0"	"6.864E-07"	"1.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYNNQPIDFLK"	"[K].tLYNNQPIDFLk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"962.54926"	"1924.09123"	"1924.09442"	"-1.66"	"-0.00159"	"11/120"	"11"	"120"	"946423.266662598"	"HCD"	"MS2"	"0"	"80.9"	"100.000"	"62.7205"	"20064"	"20064"	"20035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.9"	""	"113.8"	""	"113.0"	""	"130.1"	""	"138.4"	"143.4"	""	"874"	"25"	"36.000"	"29.000"	"0.152574317864142"	"14"	"0.0001889"	"0.0005387"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYNNQPIDFLK"	"[K].tLYNNQPIDFLk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"962.54938"	"1924.09148"	"1924.09442"	"-1.53"	"-0.00147"	"9/120"	"9"	"120"	"310371.528015137"	"HCD"	"MS2"	"0"	"29.8"	"100.000"	"63.0317"	"20191"	"20191"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.6"	""	"44.6"	""	"48.8"	""	"35.8"	""	"49.4"	"54.9"	""	"870"	"20"	"36.000"	"29.000"	"0.388587885423984"	"14"	"0.0001889"	"0.0008706"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYNNQPIDFLK"	"[K].tLYNNQPIDFLk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"962.55090"	"1924.09453"	"1924.09442"	"0.06"	"0.00006"	"13/120"	"13"	"120"	"1421662.49945068"	"HCD"	"MS2"	"0"	"119.2"	"100.000"	"62.6713"	"19991"	"19991"	"19961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.1"	""	"169.6"	""	"176.9"	""	"176.8"	""	"212.8"	"217.4"	""	"861"	"35"	"36.000"	"29.000"	"0.0143209937693069"	"16"	"0.0001859"	"0.0003361"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYNNQPIDFLK"	"[K].tLYNNQPIDFLk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"642.03674"	"1924.09568"	"1924.09442"	"0.65"	"0.00042"	"9/120"	"9"	"120"	"9402073.50622559"	"HCD"	"MS2"	"5.346761"	"252.3"	"100.000"	"62.8149"	"20102"	"20102"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"336.4"	""	"320.8"	""	"365.3"	""	"404.7"	"1.6"	"480.1"	"482.9"	""	"850"	"21"	"36.000"	"29.000"	"0.377041305116134"	"17"	"0.0001889"	"0.0003958"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYNNQPIDFLK"	"[K].tLYNNQPIDFLk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"642.03693"	"1924.09623"	"1924.09442"	"0.94"	"0.00060"	"9/120"	"9"	"120"	"8522738.34790039"	"HCD"	"MS2"	"3.028393"	"230.9"	"100.000"	"62.7219"	"20011"	"20011"	"19993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"315.5"	""	"310.0"	""	"329.1"	""	"353.5"	"4.1"	"420.5"	"455.1"	""	"855"	"21"	"36.000"	"29.000"	"0.374917851038904"	"19"	"0.0001889"	"0.0004246"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYVLPNFEVK"	"[K].kYVLPNFEVk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.06677"	"1924.18576"	"1924.18748"	"-0.89"	"-0.00057"	"9/90"	"9"	"90"	"4862210.88323975"	"HCD"	"MS2"	"15.64151"	"225.8"	"100.000"	"51.0855"	"15332"	"15332"	"15302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"403.1"	""	"313.0"	""	"238.8"	""	"405.4"	""	"411.6"	"369.3"	""	"325"	"26"	"32.000"	"25.000"	"0.03646308126147"	"14"	"0.0001308"	"0.000277"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYVLPNFEVK"	"[K].kYVLPNFEVk.[L]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.06702"	"1924.18650"	"1924.18748"	"-0.51"	"-0.00033"	"12/90"	"12"	"90"	"5060320.01800537"	"HCD"	"MS2"	"5.891322"	"239.2"	"100.000"	"50.9406"	"15222"	"15222"	"15202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"413.2"	""	"341.5"	""	"253.6"	""	"449.9"	""	"414.6"	"390.5"	""	"326"	"26"	"32.000"	"25.000"	"0.0427747622571664"	"14"	"0.0001889"	"0.0004478"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPNAIEHTLQWAR"	"[K].nFPNAIEHTLQWAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"642.67712"	"1926.01682"	"1926.01835"	"-0.79"	"-0.00051"	"11/134"	"11"	"134"	"8443845.2835083"	"HCD"	"MS2"	"13.04667"	"144.5"	"100.000"	"54.9714"	"16849"	"16849"	"16828"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.1"	""	"197.6"	""	"208.0"	""	"229.3"	"1.1"	"264.6"	"263.0"	""	"1138"	"44"	"37.000"	"30.000"	"0.00221876990418953"	"29"	"0"	"1.308E-06"	"1.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPNAIEHTLQWAR"	"[K].nFPNAIEHTLQWAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.7534"	"0.0000"	"1"	"1"	"1"	"642.67749"	"1926.01792"	"1926.01835"	"-0.22"	"-0.00014"	"10/134"	"10"	"134"	"8816457.63195801"	"HCD"	"MS2"	"34.90316"	"136.8"	"100.000"	"55.1452"	"16974"	"16974"	"16949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.8"	""	"208.8"	""	"196.6"	""	"199.5"	""	"229.5"	"262.5"	""	"1140"	"73"	"37.000"	"30.000"	"3.11799098849564E-06"	""	"0"	"6.885E-07"	"1.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THLPGFVEQAGALK"	"[K].tHLPGFVEQAGALk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.71130"	"1926.11936"	"1926.12130"	"-1.01"	"-0.00065"	"17/128"	"17"	"128"	"8854557.34985352"	"HCD"	"MS2"	"0"	"264.8"	"100.000"	"45.4822"	"13001"	"13001"	"12988"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"385.9"	""	"376.2"	""	"458.0"	""	"435.5"	"3.2"	"460.9"	"383.8"	""	"729"	"58"	"35.000"	"28.000"	"5.83038901430047E-05"	"16"	"0"	"2.349E-06"	"1.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THLPGFVEQAGALK"	"[K].tHLPGFVEQAGALk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"642.71136"	"1926.11954"	"1926.12130"	"-0.91"	"-0.00059"	"10/128"	"10"	"128"	"5889618.01794434"	"HCD"	"MS2"	"5.649966"	"169.8"	"100.000"	"46.0671"	"13286"	"13286"	"13273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.1"	""	"212.8"	""	"276.2"	""	"292.4"	"1.3"	"328.7"	"254.8"	""	"719"	"48"	"35.000"	"28.000"	"0.00059251437975342"	"21"	"0"	"5.993E-06"	"1.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THLPGFVEQAGALK"	"[K].tHLPGFVEQAGALk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"642.71143"	"1926.11972"	"1926.12130"	"-0.82"	"-0.00053"	"16/128"	"16"	"128"	"6195120.14007568"	"HCD"	"MS2"	"10.62872"	"169.3"	"100.000"	"45.7848"	"13122"	"13122"	"13103"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.7"	""	"230.5"	""	"275.0"	""	"279.6"	""	"327.0"	"255.1"	""	"718"	"54"	"35.000"	"28.000"	"0.000141610171445025"	"19"	"0"	"4.876E-06"	"1.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THLPGFVEQAGALK"	"[K].tHLPGFVEQAGALk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"642.71198"	"1926.12137"	"1926.12130"	"0.04"	"0.00002"	"15/128"	"15"	"128"	"10535894.616333"	"HCD"	"MS2"	"11.63898"	"285.7"	"100.000"	"45.7878"	"13174"	"13174"	"13160"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"414.0"	""	"392.1"	""	"470.5"	""	"489.7"	"0.3"	"510.3"	"425.5"	""	"737"	"39"	"35.000"	"28.000"	"0.00443034444156516"	"18"	"0"	"1.048E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGVPVALDLITSGK"	"[R].vVGVPVALDLITSGk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"P07896"	"Peroxisomal bifunctional enzyme OS=Rattus norvegicus OX=10116 GN=Ehhadh PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.73920"	"1926.20304"	"1926.20397"	"-0.48"	"-0.00031"	"10/120"	"10"	"120"	"488753.97442627"	"HCD"	"MS2"	"40.15662"	"19.4"	"100.000"	"81.1879"	"27581"	"27581"	"27550"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.3"	""	"19.4"	""	"31.7"	""	"34.3"	""	"33.9"	"40.6"	""	"212"	"28"	"30.000"	"23.000"	"0.0180013827160945"	"14"	"0.0003839"	"0.002055"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASQAGQTALMLAVSHGR"	"[K].aSQAGQTALMLAVSHGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"3"	"3"	"0.7447"	"0.0000"	"1"	"1"	"1"	"643.01721"	"1927.03708"	"1927.03809"	"-0.53"	"-0.00034"	"19/180"	"19"	"180"	"3826561.9932251"	"HCD"	"MS2"	"20.08986"	"150.5"	"100.000"	"41.0705"	"11257"	"11257"	"11229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.2"	"2.2"	"199.3"	""	"198.1"	""	"230.6"	""	"306.4"	"282.7"	""	"1146"	"47"	"37.000"	"30.000"	"0.00105719383518984"	"28"	"0"	"9.308E-07"	"1.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASQAGQTALMLAVSHGR"	"[K].aSQAGQTALMLAVSHGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.01782"	"1927.03891"	"1927.03809"	"0.42"	"0.00027"	"18/180"	"18"	"180"	"3115743.83172607"	"HCD"	"MS2"	"18.35736"	"159.6"	"100.000"	"40.9261"	"11154"	"11154"	"11125"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.4"	""	"184.3"	""	"230.8"	""	"233.9"	""	"326.4"	"317.1"	""	"1149"	"45"	"37.000"	"30.000"	"0.00177537472597906"	"15"	"0"	"1.483E-06"	"1.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTPGTFTNQIQAAFR"	"[R].fTPGTFTNQIQAAFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"964.51392"	"1928.02056"	"1928.02276"	"-1.14"	"-0.00110"	"10/136"	"10"	"136"	"256029.343994141"	"HCD"	"MS2"	"9.726477"	"13.4"	"100.000"	"70.2819"	"23142"	"23142"	"23114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.6"	""	"16.3"	""	"22.5"	""	"26.2"	""	"23.5"	"24.4"	""	"1136"	"8"	"37.000"	"30.000"	"9.42645363424535"	"13"	"0.002393"	"0.03543"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTPGTFTNQIQAAFR"	"[R].fTPGTFTNQIQAAFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"964.51465"	"1928.02202"	"1928.02276"	"-0.38"	"-0.00037"	"12/136"	"12"	"136"	"495068.799438477"	"HCD"	"MS2"	"0"	"26.9"	"100.000"	"69.9543"	"23008"	"23008"	"22986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.0"	""	"35.0"	""	"34.1"	""	"54.7"	""	"46.8"	"55.1"	""	"1150"	"58"	"37.000"	"30.000"	"8.54412994315029E-05"	"20"	"0"	"1.263E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTPGTFTNQIQAAFR"	"[R].fTPGTFTNQIQAAFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"964.51489"	"1928.02251"	"1928.02276"	"-0.13"	"-0.00013"	"11/136"	"11"	"136"	"608239.61114502"	"HCD"	"MS2"	"0"	"36.0"	"100.000"	"70.0990"	"23015"	"23015"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.7"	""	"47.6"	""	"50.5"	""	"65.7"	"3.2"	"63.5"	"60.8"	""	"1150"	"52"	"37.000"	"30.000"	"0.000370397327671227"	"20"	"0"	"2.245E-06"	"1.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSIFAVFDSIQSAK"	"[K].gSIFAVFDSIQSAk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"964.54651"	"1928.08574"	"1928.08933"	"-1.86"	"-0.00180"	"6/130"	"6"	"130"	"109924.87298584"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"80.4287"	"27271"	"27271"	"27247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.6"	""	"5.9"	""	"8.8"	""	"16.7"	""	"18.5"	"20.8"	""	"952"	"19"	"36.000"	"29.000"	"0.617457332988363"	"14"	"0.0004166"	"0.002441"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNEILFPFYDAK"	"[R].lNEILFPFYDAk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"964.54944"	"1928.09160"	"1928.09336"	"-0.91"	"-0.00088"	"10/122"	"10"	"122"	"100844.864624023"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"86.9947"	"29939"	"29939"	"29922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.4"	""	"9.1"	""	"12.9"	""	"11.1"	""	"5.8"	"17.6"	""	"934"	"31"	"36.000"	"29.000"	"0.0332136710876105"	"16"	"0.0001889"	"0.0006256"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNEILFPFYDAK"	"[R].lNEILFPFYDAk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"964.54950"	"1928.09172"	"1928.09336"	"-0.85"	"-0.00082"	"7/122"	"7"	"122"	"120568.218078613"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"86.9337"	"29863"	"29863"	"29838"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.4"	""	"15.1"	""	"13.5"	""	"12.1"	""	"15.0"	"17.9"	""	"934"	"26"	"36.000"	"29.000"	"0.131013750892345"	"15"	"0.0001889"	"0.001042"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MKETAEAYLGK"	"[K].mkETAEAYLGk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"643.37561"	"1928.11228"	"1928.11300"	"-0.37"	"-0.00024"	"12/104"	"12"	"104"	"8663551.22564697"	"HCD"	"MS2"	"25.54229"	"518.9"	"100.000"	"44.9960"	"12804"	"12804"	"12784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"968.6"	""	"776.0"	""	"785.1"	""	"624.3"	"1.0"	"846.7"	"903.1"	""	"804"	"8"	"36.000"	"29.000"	"6.71778426952905"	"15"	"0"	"8.086E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLAEHLLKPLPADR"	"[M].aLLAEHLLkPLPADR.[Q]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.38965"	"1928.15439"	"1928.15305"	"0.70"	"0.00045"	"13/142"	"13"	"142"	"7770639.42626953"	"HCD"	"MS2"	"41.21531"	"198.0"	"100.000"	"63.7035"	"20412"	"20412"	"20393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"241.7"	""	"258.5"	""	"270.0"	""	"349.8"	"0.7"	"375.2"	"381.5"	""	"512"	"10"	"34.000"	"27.000"	"2.69302239698745"	"13"	"0.0001308"	"0.0002815"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFIQPTVFGDVK"	"[R].gYFIQPTVFGDVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"965.04559"	"1929.08391"	"1929.08861"	"-2.43"	"-0.00235"	"17/120"	"17"	"120"	"3424302.0690918"	"HCD"	"MS2"	"0"	"221.8"	"100.000"	"67.6907"	"22033"	"22033"	"22015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.9"	""	"331.5"	""	"340.2"	""	"336.8"	""	"370.9"	"387.0"	""	"1032"	"39"	"37.000"	"30.000"	"0.00592447268692391"	"15"	"0"	"3.249E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFIQPTVFGDVK"	"[R].gYFIQPTVFGDVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.70001"	"1929.08548"	"1929.08861"	"-1.62"	"-0.00104"	"15/120"	"15"	"120"	"14810259.7180176"	"HCD"	"MS2"	"6.498889"	"365.9"	"100.000"	"67.6856"	"22031"	"22031"	"22015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"554.8"	""	"549.3"	""	"598.8"	""	"538.3"	"1.1"	"594.4"	"623.6"	""	"1027"	"45"	"37.000"	"30.000"	"0.00176011258391602"	"15"	"0"	"9.529E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFIQPTVFGDVK"	"[R].gYFIQPTVFGDVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.70007"	"1929.08567"	"1929.08861"	"-1.52"	"-0.00098"	"14/120"	"14"	"120"	"24238370.9921875"	"HCD"	"MS2"	"1.106621"	"367.2"	"60.300"	"67.5895"	"22043"	"22043"	"22026"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"511.6"	""	"565.8"	""	"584.8"	""	"546.8"	""	"613.9"	"661.2"	""	"1027"	"39"	"37.000"	"30.000"	"0.00718688090141039"	"15"	"0"	"0.0001549"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFIQPTVFGDVK"	"[R].gYFIQPTVFGDVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9692"	"0.0000"	"1"	"1"	"1"	"965.04706"	"1929.08684"	"1929.08861"	"-0.92"	"-0.00088"	"18/120"	"18"	"120"	"2143568.32385254"	"HCD"	"MS2"	"0"	"138.2"	"100.000"	"67.5407"	"22023"	"22023"	"21994"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.1"	""	"213.7"	""	"224.0"	""	"199.2"	"2.5"	"213.2"	"230.1"	""	"1011"	"65"	"37.000"	"30.000"	"1.45117958421348E-05"	"18"	"0"	"8.789E-06"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFIQPTVFGDVK"	"[R].gYFIQPTVFGDVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"643.70062"	"1929.08731"	"1929.08861"	"-0.67"	"-0.00043"	"8/120"	"8"	"120"	"12394573.1842041"	"HCD"	"MS2"	"7.124332"	"127.1"	"39.792"	"67.9024"	"22171"	"22171"	"22154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.5"	""	"191.2"	""	"202.5"	""	"174.9"	""	"211.7"	"235.0"	""	"1015"	"40"	"37.000"	"30.000"	"0.0045544511320913"	"20"	"0"	"0.000113"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFIQPTVFGDVK"	"[R].gYFIQPTVFGDVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"965.04773"	"1929.08818"	"1929.08861"	"-0.22"	"-0.00021"	"18/120"	"18"	"120"	"2086180.6630249"	"HCD"	"MS2"	"0"	"146.9"	"100.000"	"67.9958"	"22157"	"22157"	"22138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"207.6"	""	"227.1"	""	"229.9"	""	"229.4"	""	"229.4"	"268.7"	""	"999"	"38"	"36.000"	"29.000"	"0.00886207645704638"	"15"	"0"	"6.318E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFIQPTVFGDVK"	"[R].gYFIQPTVFGDVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"965.04803"	"1929.08879"	"1929.08861"	"0.10"	"0.00009"	"17/120"	"17"	"120"	"3221166.4855957"	"HCD"	"MS2"	"0"	"116.9"	"100.000"	"67.8241"	"22139"	"22139"	"22122"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.2"	""	"166.3"	""	"190.9"	""	"161.8"	""	"212.3"	"212.9"	""	"1001"	"66"	"36.000"	"30.000"	"1.31644912994364E-05"	"22"	"0"	"1.123E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFIQPTVFGDVK"	"[R].gYFIQPTVFGDVk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.70129"	"1929.08933"	"1929.08861"	"0.37"	"0.00024"	"14/120"	"14"	"120"	"18816288.4606934"	"HCD"	"MS2"	"5.975552"	"126.6"	"25.454"	"67.9935"	"22156"	"22156"	"22138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.8"	""	"186.6"	""	"200.5"	""	"165.5"	"1.3"	"220.4"	"236.9"	""	"987"	"44"	"36.000"	"29.000"	"0.00186761415557886"	"15"	"0"	"5.258E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLINQMLTINPAK"	"[K].nLINqMLTINPAk.[R]"	"N-Term(TMT6plex); Q5(Deamidated); K13(TMT6plex)"	"1"	"2"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730; P08413"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus OX=10116 GN=Camk2b PE=1 SV=1"	"0"	"3"	"3"	"0.2353"	"0.0000"	"1"	"1"	"1"	"643.71887"	"1929.14206"	"1929.12434"	"9.19"	"0.00591"	"12/120"	"12"	"120"	"4220377.41040039"	"HCD"	"MS2"	"67.13604"	"109.4"	"100.000"	"68.0755"	"22241"	"22241"	"22218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.1"	""	"158.4"	""	"172.3"	""	"163.9"	""	"192.2"	"217.3"	""	"620"	"17"	"34.000"	"27.000"	"0.634397837384649"	"21"	"0.0001889"	"0.0006538"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLINQMLTINPAK"	"[K].nLINQMLTInPAk.[R]"	"N-Term(TMT6plex); N10(Deamidated); K13(TMT6plex)"	"1"	"2"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730; P08413"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus OX=10116 GN=Camk2b PE=1 SV=1"	"0"	"3"	"3"	"0.2353"	"0.0000"	"1"	"2"	"2"	"643.71887"	"1929.14206"	"1929.12434"	"9.19"	"0.00591"	"8/120"	"8"	"120"	"4220377.41040039"	"HCD"	"MS2"	"67.13604"	"109.4"	"100.000"	"68.0755"	"22241"	"22241"	"22218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.1"	""	"158.4"	""	"172.3"	""	"163.9"	""	"192.2"	"217.3"	""	"620"	"17"	"34.000"	"27.000"	"0.690814896273794"	"21"	"0.0001889"	"0.0007981"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKPITPETAEK"	"[K].qkPITPETAEk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"643.72485"	"1929.16001"	"1929.16239"	"-1.23"	"-0.00079"	"10/110"	"10"	"110"	"2520664.63238525"	"HCD"	"MS2"	"0"	"138.3"	"100.000"	"30.7065"	"7022"	"7022"	"6992"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"206.6"	""	"151.3"	""	"135.2"	""	"255.6"	""	"295.8"	"268.8"	""	"483"	"37"	"33.000"	"26.000"	"0.0043143674932677"	"15"	"0"	"9.73E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKPITPETAEK"	"[K].qkPITPETAEk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.72571"	"1929.16257"	"1929.16239"	"0.09"	"0.00006"	"8/110"	"8"	"110"	"2777227.46374512"	"HCD"	"MS2"	"0"	"145.8"	"100.000"	"30.6239"	"6947"	"6947"	"6920"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"212.7"	""	"152.7"	""	"157.5"	""	"259.2"	""	"308.9"	"295.6"	""	"470"	"36"	"33.000"	"26.000"	"0.0056763329609456"	"15"	"0"	"5.331E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQQAGLPLIVLAGK"	"[R].yQQAGLPLIVLAGk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"643.73541"	"1929.19168"	"1929.19374"	"-1.07"	"-0.00069"	"12/130"	"12"	"130"	"3488801.27209473"	"HCD"	"MS2"	"37.33928"	"62.6"	"100.000"	"72.6248"	"24098"	"24098"	"24079"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.9"	""	"92.9"	""	"91.6"	""	"90.6"	""	"99.8"	"118.1"	""	"329"	"21"	"32.000"	"25.000"	"0.117534645639422"	"16"	"0"	"7.758E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQQAGLPLIVLAGK"	"[R].yQQAGLPLIVLAGk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"965.10028"	"1929.19328"	"1929.19374"	"-0.24"	"-0.00023"	"14/130"	"14"	"130"	"190220.493469238"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"72.6110"	"24093"	"24093"	"24063"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.0"	""	"19.5"	""	"17.3"	""	"18.1"	""	"20.2"	"19.4"	""	"309"	"50"	"31.000"	"24.000"	"0.000144853330070048"	"18"	"0"	"0.0001239"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQQAGLPLIVLAGK"	"[R].yQQAGLPLIVLAGk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"965.10040"	"1929.19353"	"1929.19374"	"-0.11"	"-0.00011"	"9/130"	"9"	"130"	"124055.005004883"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"72.7739"	"24108"	"24108"	"24081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.0"	""	"10.9"	""	"12.1"	""	"12.8"	""	"14.1"	"12.4"	""	"309"	"17"	"31.000"	"24.000"	"0.277925556387398"	"14"	"0.001058"	"0.01339"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQQAGLPLIVLAGK"	"[R].yQQAGLPLIVLAGk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.73651"	"1929.19498"	"1929.19374"	"0.64"	"0.00041"	"13/130"	"13"	"130"	"3300251.98669434"	"HCD"	"MS2"	"44.32684"	"62.7"	"100.000"	"72.6357"	"24051"	"24051"	"24033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.6"	""	"85.5"	""	"91.4"	""	"97.8"	""	"100.7"	"111.2"	""	"308"	"23"	"31.000"	"24.000"	"0.0762993293839377"	"14"	"0"	"8.628E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYLPIGGLADFCK"	"[K].eYLPIGGLADFck.[A]"	"N-Term(TMT6plex); C12(Methylthio); K13(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"965.51379"	"1930.02031"	"1930.02185"	"-0.80"	"-0.00077"	"5/114"	"5"	"114"	"96558.5156860352"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"87.3795"	"30095"	"30095"	"30075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"6.2"	""	"12.4"	""	"8.0"	""	"11.6"	"16.5"	""	"1107"	"3"	"37.000"	"30.000"	"26.492175610058"	"13"	"0.002361"	"0.03479"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYLPIGGLADFCK"	"[K].eYLPIGGLADFck.[A]"	"N-Term(TMT6plex); C12(Methylthio); K13(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"965.51447"	"1930.02165"	"1930.02185"	"-0.10"	"-0.00010"	"7/114"	"7"	"114"	"111963.353759766"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"87.2863"	"30006"	"30006"	"29981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.5"	""	"9.5"	""	"12.4"	""	"14.6"	""	"13.9"	"21.8"	""	"1128"	"9"	"37.000"	"30.000"	"6.58080624022383"	"13"	"0.0006037"	"0.005468"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSSDVLVFDYTK"	"[K].tPSSDVLVFDYTk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"965.53204"	"1930.05681"	"1930.05737"	"-0.29"	"-0.00028"	"12/118"	"12"	"118"	"398438.977905273"	"HCD"	"MS2"	"0"	"35.1"	"100.000"	"59.1423"	"18550"	"18550"	"18521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.0"	""	"49.2"	""	"46.9"	""	"61.5"	""	"70.1"	"64.3"	""	"1185"	"42"	"37.000"	"30.000"	"0.00393267769213131"	"25"	"0.0001308"	"0.0002286"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATITATSPGALWGLDR"	"[R].aATITATSPGALWGLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.02411"	"1930.05777"	"1930.05954"	"-0.92"	"-0.00059"	"17/154"	"17"	"154"	"5106594.8213501"	"HCD"	"MS2"	"30.56235"	"119.2"	"100.000"	"61.6114"	"19611"	"19611"	"19587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.8"	""	"152.9"	""	"167.1"	""	"210.0"	"1.7"	"220.6"	"242.0"	""	"1190"	"25"	"37.000"	"30.000"	"0.180101348972028"	"14"	"0"	"2.966E-05"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSSDVLVFDYTK"	"[K].tPSSDVLVFDYTk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"965.53259"	"1930.05791"	"1930.05737"	"0.28"	"0.00027"	"8/118"	"8"	"118"	"425950.354858398"	"HCD"	"MS2"	"0"	"36.3"	"100.000"	"59.2398"	"18643"	"18643"	"18613"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.2"	""	"48.2"	""	"39.3"	""	"53.6"	""	"68.3"	"90.5"	""	"1190"	"30"	"37.000"	"30.000"	"0.0623041486090285"	"23"	"0.0001889"	"0.0004287"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATITATSPGALWGLDR"	"[R].aATITATSPGALWGLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"3"	"3"	"0.8226"	"0.0000"	"1"	"1"	"1"	"644.02423"	"1930.05814"	"1930.05954"	"-0.73"	"-0.00047"	"10/154"	"10"	"154"	"9181840.66394043"	"HCD"	"MS2"	"27.22304"	"155.8"	"91.691"	"61.4686"	"19499"	"19499"	"19481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.3"	""	"191.3"	""	"228.2"	""	"274.1"	""	"301.0"	"293.3"	""	"1190"	"62"	"37.000"	"30.000"	"3.8416426627562E-05"	"27"	"0"	"1.098E-05"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATITATSPGALWGLDR"	"[R].aATITATSPGALWGLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"2"	"2"	"0.8841"	"0.0000"	"1"	"1"	"1"	"965.53278"	"1930.05828"	"1930.05954"	"-0.66"	"-0.00063"	"14/154"	"14"	"154"	"859624.752624512"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"61.6137"	"19612"	"19612"	"19587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.5"	""	"61.1"	""	"53.3"	""	"65.0"	""	"74.7"	"72.6"	""	"1190"	"69"	"37.000"	"30.000"	"7.21966366026662E-06"	"24"	"0"	"7.733E-07"	"1.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATITATSPGALWGLDR"	"[R].aATITATSPGALWGLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"965.53351"	"1930.05974"	"1930.05954"	"0.10"	"0.00010"	"12/154"	"12"	"154"	"891904.489685059"	"HCD"	"MS2"	"8.03668"	"40.8"	"100.000"	"61.4388"	"19487"	"19487"	"19465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.6"	""	"56.2"	""	"60.7"	""	"71.7"	""	"67.7"	"75.6"	""	"1186"	"57"	"37.000"	"30.000"	"0.000112993820575221"	"20"	"0"	"1.45E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYVPQSLWPQIK"	"[R].lYVPQSLWPQIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"644.05554"	"1930.15207"	"1930.15663"	"-2.36"	"-0.00152"	"10/102"	"10"	"102"	"1641932.18426514"	"HCD"	"MS2"	"61.46661"	"31.4"	"100.000"	"76.5998"	"25713"	"25713"	"25703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.8"	""	"40.3"	""	"47.4"	""	"45.3"	"1.0"	"49.8"	"58.8"	""	"556"	"21"	"34.000"	"27.000"	"0.198629978648993"	"17"	"0.0001889"	"0.0006431"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYVPQSLWPQIK"	"[R].lYVPQSLWPQIk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"644.05695"	"1930.15628"	"1930.15663"	"-0.18"	"-0.00011"	"10/102"	"10"	"102"	"1830435.14453125"	"HCD"	"MS2"	"68.25298"	"31.8"	"100.000"	"76.8350"	"25754"	"25754"	"25739"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.8"	""	"43.2"	""	"53.4"	""	"46.8"	""	"55.5"	"57.3"	""	"555"	"21"	"34.000"	"27.000"	"0.207139530458793"	"17"	"0"	"0.0001028"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPVILMDETLK"	"[K].iSLPVILMDETLk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"3"	"3"	"0.6750"	"0.0000"	"1"	"1"	"1"	"644.06061"	"1930.16727"	"1930.16989"	"-1.36"	"-0.00087"	"14/114"	"14"	"114"	"953984.065612793"	"HCD"	"MS2"	"45.62046"	"25.0"	"100.000"	"90.0338"	"31083"	"31083"	"31074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.7"	""	"33.1"	""	"40.4"	""	"40.2"	""	"50.9"	"45.6"	""	"497"	"40"	"33.000"	"26.000"	"0.00273732518421042"	""	"0"	"0.0001726"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPVILMDETLK"	"[K].iSLPVILMDETLk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"965.58783"	"1930.16838"	"1930.16989"	"-0.78"	"-0.00076"	"4/114"	"4"	"114"	"101837.178833008"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"89.6717"	"30948"	"30948"	"30932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.1"	""	"7.9"	""	"9.9"	""	"10.0"	""	"12.3"	"14.2"	""	"492"	"12"	"33.000"	"26.000"	"1.46532887308137"	"19"	"0.001217"	"0.01782"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPVILMDETLK"	"[K].iSLPVILMDETLk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"644.06110"	"1930.16874"	"1930.16989"	"-0.60"	"-0.00039"	"14/114"	"14"	"114"	"733748.545837402"	"HCD"	"MS2"	"46.86152"	"18.3"	"100.000"	"89.7134"	"30964"	"30964"	"30955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.6"	""	"22.3"	""	"29.3"	""	"26.6"	""	"43.3"	"35.1"	""	"491"	"36"	"33.000"	"26.000"	"0.0057154640375676"	"26"	"0"	"8.703E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPVILMDETLK"	"[K].iSLPVILMDETLk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"644.06110"	"1930.16874"	"1930.16989"	"-0.60"	"-0.00039"	"14/114"	"14"	"114"	"739574.331726074"	"HCD"	"MS2"	"48.0617"	"16.0"	"100.000"	"89.5980"	"30881"	"30881"	"30866"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.1"	""	"15.4"	""	"29.6"	""	"29.6"	"1.2"	"28.0"	"23.4"	""	"491"	"42"	"33.000"	"26.000"	"0.00160713180733516"	""	"0"	"2.952E-05"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPVILMDETLK"	"[K].iSLPVILMDETLk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"965.58826"	"1930.16924"	"1930.16989"	"-0.34"	"-0.00033"	"13/114"	"13"	"114"	"224659.74420166"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"89.9386"	"31047"	"31047"	"31040"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.5"	""	"17.8"	""	"20.7"	""	"22.3"	""	"28.8"	"33.3"	""	"490"	"37"	"33.000"	"26.000"	"0.00457263024254494"	"16"	"0.0001308"	"0.0002162"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPVILMDETLK"	"[K].iSLPVILMDETLk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"965.58832"	"1930.16936"	"1930.16989"	"-0.28"	"-0.00027"	"13/114"	"13"	"114"	"227329.309814453"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"89.8097"	"30964"	"30964"	"30957"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.1"	""	"16.9"	""	"22.0"	""	"25.7"	"1.7"	"31.3"	"25.1"	""	"488"	"34"	"33.000"	"26.000"	"0.00947086893017181"	"16"	"0.0001308"	"0.0002339"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPVILMDETLK"	"[K].iSLPVILMDETLk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"644.06134"	"1930.16947"	"1930.16989"	"-0.22"	"-0.00014"	"14/114"	"14"	"114"	"926773.687072754"	"HCD"	"MS2"	"35.20237"	"24.9"	"100.000"	"89.8933"	"30997"	"30997"	"30983"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.3"	""	"25.9"	""	"40.9"	""	"46.2"	""	"50.7"	"49.2"	""	"485"	"39"	"33.000"	"26.000"	"0.00333973296206782"	"25"	"0"	"6.231E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLPVILMDETLK"	"[K].iSLPVILMDETLk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"965.58850"	"1930.16973"	"1930.16989"	"-0.09"	"-0.00008"	"4/114"	"4"	"114"	"80085.7284545898"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"89.5282"	"30854"	"30854"	"30838"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.0"	""	"9.3"	""	"8.2"	""	"7.6"	""	"14.7"	"11.3"	""	"483"	"9"	"33.000"	"26.000"	"2.94385988140355"	"14"	"0.0006037"	"0.006113"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFVADFK"	"[R].aLYQAEAFVADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.8923"	"0.0000"	"1"	"1"	"1"	"966.03656"	"1931.06584"	"1931.06787"	"-1.05"	"-0.00101"	"15/124"	"15"	"124"	"376881.715820313"	"HCD"	"MS2"	"10.96007"	"30.2"	"100.000"	"80.9342"	"27477"	"27477"	"27454"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.0"	""	"47.2"	""	"37.6"	""	"51.5"	"1.2"	"49.4"	"50.1"	""	"1151"	"65"	"37.000"	"30.000"	"1.9635652063842E-05"	"24"	"0"	"1.897E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFVDLEPTVIDEVR"	"[R].aVFVDLEPTVIDEVR.[T]"	"N-Term(TMT6plex)"	"1"	"3"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"966.03668"	"1931.06609"	"1931.06871"	"-1.36"	"-0.00131"	"13/128"	"13"	"128"	"341968.687927246"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"73.6321"	"24510"	"24510"	"24479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.3"	""	"20.4"	""	"18.7"	""	"23.9"	""	"22.4"	"25.2"	""	"1142"	"35"	"37.000"	"30.000"	"0.0180150763994691"	"15"	"0"	"0.0001195"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFVADFK"	"[R].aLYQAEAFVADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"966.03674"	"1931.06621"	"1931.06787"	"-0.86"	"-0.00083"	"10/124"	"10"	"124"	"586158.022460938"	"HCD"	"MS2"	"0"	"49.5"	"100.000"	"81.2114"	"27539"	"27539"	"27520"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.9"	""	"91.6"	""	"66.2"	""	"65.8"	"2.5"	"84.8"	"89.2"	""	"1142"	"65"	"37.000"	"30.000"	"1.83923027982284E-05"	"17"	"0"	"6.793E-06"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFVDLEPTVIDEVR"	"[R].aVFVDLEPTVIDEVR.[T]"	"N-Term(TMT6plex)"	"1"	"3"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"966.03674"	"1931.06621"	"1931.06871"	"-1.29"	"-0.00125"	"7/128"	"7"	"128"	"312570.310852051"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"73.6436"	"24463"	"24463"	"24433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.2"	""	"15.0"	""	"19.4"	""	"25.1"	""	"24.0"	"26.7"	""	"1142"	"27"	"37.000"	"30.000"	"0.104384522341751"	"15"	"0.0001308"	"0.0002711"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFVADFK"	"[R].aLYQAEAFVADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.36035"	"1931.06650"	"1931.06787"	"-0.71"	"-0.00046"	"12/124"	"12"	"124"	"3255493.80255127"	"HCD"	"MS2"	"7.761738"	"79.6"	"100.000"	"80.8976"	"27411"	"27411"	"27392"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.6"	""	"127.5"	""	"107.1"	""	"131.4"	""	"129.3"	"137.2"	""	"1150"	"37"	"37.000"	"30.000"	"0.0114200457748049"	"15"	"0"	"2.885E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFVADFK"	"[R].aLYQAEAFVADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.9206"	"0.0000"	"1"	"1"	"1"	"644.36053"	"1931.06705"	"1931.06787"	"-0.42"	"-0.00027"	"9/124"	"9"	"124"	"8275948.42852783"	"HCD"	"MS2"	"3.241812"	"143.5"	"73.419"	"81.2091"	"27538"	"27538"	"27520"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.4"	""	"261.3"	""	"191.0"	""	"221.5"	"0.2"	"237.1"	"242.7"	""	"1115"	"63"	"37.000"	"30.000"	"2.73051691797908E-05"	"21"	"0"	"6.561E-06"	"1.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFVADFK"	"[R].aLYQAEAFVADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.9206"	"0.0000"	"1"	"1"	"1"	"644.36053"	"1931.06705"	"1931.06787"	"-0.42"	"-0.00027"	"9/124"	"9"	"124"	"7878164.37426758"	"HCD"	"MS2"	"3.964281"	"143.4"	"84.465"	"81.1972"	"27584"	"27584"	"27566"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"201.0"	""	"252.3"	""	"200.1"	""	"220.0"	"1.3"	"226.4"	"255.4"	""	"1115"	"63"	"37.000"	"30.000"	"2.70548338840382E-05"	"22"	"0"	"1.08E-05"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFVADFK"	"[R].aLYQAEAFVADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"966.03741"	"1931.06755"	"1931.06787"	"-0.16"	"-0.00016"	"17/124"	"17"	"124"	"291912.863037109"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"81.2712"	"27615"	"27615"	"27598"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.7"	""	"43.1"	""	"32.7"	""	"38.1"	""	"39.9"	"36.0"	""	"1132"	"63"	"37.000"	"30.000"	"2.77853857902373E-05"	"17"	"0"	"4.043E-06"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFVADFK"	"[R].aLYQAEAFVADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"966.03821"	"1931.06914"	"1931.06787"	"0.66"	"0.00063"	"9/124"	"9"	"124"	"343938.195800781"	"HCD"	"MS2"	"24.5372"	"27.8"	"100.000"	"80.9207"	"27421"	"27421"	"27392"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.4"	""	"46.9"	""	"32.8"	""	"48.0"	"0.3"	"46.5"	"51.6"	""	"1136"	"48"	"37.000"	"30.000"	"0.000921188135299873"	"17"	"0"	"3.773E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFVADFK"	"[R].aLYQAEAFVADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.36188"	"1931.07108"	"1931.06787"	"1.66"	"0.00107"	"12/124"	"12"	"124"	"2832199.02703857"	"HCD"	"MS2"	"13.3658"	"67.7"	"100.000"	"80.8832"	"27456"	"27456"	"27438"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.9"	""	"115.4"	""	"92.0"	""	"123.6"	"0.8"	"110.9"	"111.3"	""	"1106"	"36"	"37.000"	"30.000"	"0.0130234225399449"	"15"	"0"	"2.921E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLLASHVDDYLAK"	"[R].aGLLASHVDDYLAk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"A0JPN2"	"Zinc transporter ZIP4 OS=Rattus norvegicus OX=10116 GN=Slc39a4 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.37134"	"1931.09946"	"1931.10023"	"-0.40"	"-0.00026"	"14/112"	"14"	"112"	"8652799.99890137"	"HCD"	"MS2"	"15.93468"	"268.2"	"87.843"	"51.7236"	"15542"	"15542"	"15522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"328.6"	""	"374.7"	""	"396.0"	""	"441.2"	"4.3"	"470.7"	"525.7"	""	"1023"	"44"	"37.000"	"30.000"	"0.00216194996196856"	"15"	"0"	"8.827E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKDLEALLNSK"	"[R].lkDLEALLNSk.[E]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.40930"	"1931.21335"	"1931.21442"	"-0.56"	"-0.00036"	"6/112"	"6"	"112"	"2447198.48779297"	"HCD"	"MS2"	"16.70638"	"107.3"	"100.000"	"68.4745"	"22404"	"22404"	"22378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.0"	""	"93.3"	""	"87.7"	""	"198.2"	""	"258.0"	"290.9"	""	"270"	"10"	"31.000"	"24.000"	"1.44655106207077"	"13"	"0.0004166"	"0.00236"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKDLEALLNSK"	"[R].lkDLEALLNSk.[E]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.40948"	"1931.21390"	"1931.21442"	"-0.27"	"-0.00017"	"15/112"	"15"	"112"	"3097751.99511719"	"HCD"	"MS2"	"16.7048"	"138.5"	"100.000"	"68.5542"	"22385"	"22385"	"22362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.5"	""	"118.1"	""	"103.7"	""	"250.2"	""	"345.7"	"355.2"	""	"270"	"24"	"31.000"	"24.000"	"0.0567980948318999"	"14"	"0"	"1.757E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFQLDSPATPEK"	"[K].qLFQLDSPATPEk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"644.69824"	"1932.08017"	"1932.08425"	"-2.11"	"-0.00136"	"12/132"	"12"	"132"	"4256245.2467041"	"HCD"	"MS2"	"38.63866"	"208.2"	"100.000"	"53.3469"	"16197"	"16197"	"16185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.3"	""	"282.5"	""	"302.2"	""	"348.1"	""	"380.2"	"356.9"	""	"1167"	"31"	"37.000"	"30.000"	"0.0458184992794977"	"22"	"0"	"6.793E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFQLDSPATPEK"	"[K].qLFQLDSPATPEk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"644.69879"	"1932.08182"	"1932.08425"	"-1.26"	"-0.00081"	"7/132"	"7"	"132"	"3932323.55523682"	"HCD"	"MS2"	"34.96783"	"172.4"	"100.000"	"53.4501"	"16293"	"16293"	"16281"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"263.0"	""	"229.1"	""	"237.8"	""	"290.9"	"2.0"	"302.5"	"306.8"	""	"1144"	"44"	"37.000"	"30.000"	"0.00234636746908339"	"21"	"0"	"2.674E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLIMELINNVAK"	"[K].tVLImELINNVAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K13(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"966.58234"	"1932.15740"	"1932.16039"	"-1.55"	"-0.00150"	"4/114"	"4"	"114"	"83563.7373657227"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"83.3503"	"28412"	"28412"	"28382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	""	""	"4.3"	""	"22.0"	""	"9.7"	"12.1"	""	"582"	"9"	"34.000"	"27.000"	"3.36428662477901"	"14"	"0.0008731"	"0.009488"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLIMELINNVAK"	"[K].tVLImELINNVAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K13(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"966.58252"	"1932.15776"	"1932.16039"	"-1.36"	"-0.00131"	"11/114"	"11"	"114"	"125036.40020752"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"83.0598"	"28344"	"28344"	"28317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.2"	""	"6.6"	""	"5.3"	""	"23.5"	""	"10.8"	"17.5"	""	"573"	"27"	"34.000"	"27.000"	"0.0602732522993096"	"14"	"0.0004166"	"0.002252"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLIMELINNVAK"	"[K].tVLImELINNVAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K13(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"966.58289"	"1932.15849"	"1932.16039"	"-0.98"	"-0.00095"	"7/114"	"7"	"114"	"81217.607421875"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"83.3681"	"28470"	"28470"	"28445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.1"	""	"2.4"	""	"3.4"	""	"13.4"	""	"7.9"	"11.7"	""	"580"	"17"	"34.000"	"27.000"	"0.618583024812507"	"14"	"0.0003839"	"0.001807"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLIMELINNVAK"	"[K].tVLImELINNVAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K13(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"644.72473"	"1932.15964"	"1932.16039"	"-0.39"	"-0.00025"	"11/114"	"11"	"114"	"1182911.58642578"	"HCD"	"MS2"	"26.45378"	"28.2"	"100.000"	"82.9867"	"28263"	"28263"	"28240"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.7"	""	"26.9"	""	"31.6"	""	"90.9"	""	"50.0"	"48.0"	""	"568"	"39"	"34.000"	"27.000"	"0.0038310545865603"	"24"	"0"	"5.983E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLIMELINNVAK"	"[K].tVLImELINNVAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K13(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"644.72485"	"1932.16001"	"1932.16039"	"-0.20"	"-0.00013"	"11/114"	"11"	"114"	"933670.754882813"	"HCD"	"MS2"	"18.84819"	"23.7"	"100.000"	"83.0461"	"28338"	"28338"	"28317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.3"	""	"22.5"	""	"28.8"	""	"64.8"	"1.1"	"48.5"	"41.6"	""	"579"	"25"	"34.000"	"27.000"	"0.0952025471385971"	"18"	"0"	"0.0001478"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLIMELINNVAK"	"[K].tVLImELINNVAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K13(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"966.58472"	"1932.16216"	"1932.16039"	"0.91"	"0.00088"	"9/114"	"9"	"114"	"145826.815246582"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"83.0051"	"28271"	"28271"	"28240"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"8.7"	""	"6.3"	""	"30.1"	""	"14.1"	"15.1"	""	"561"	"21"	"34.000"	"27.000"	"0.249420913559155"	"14"	"0.0006037"	"0.005817"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEVEKPFAIAK"	"[K].iEVEkPFAIAk.[E]"	"N-Term(TMT6plex); K5(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.74225"	"1932.21219"	"1932.21370"	"-0.78"	"-0.00050"	"12/96"	"12"	"96"	"6869262.89630127"	"HCD"	"MS2"	"12.76688"	"413.3"	"100.000"	"51.0628"	"15322"	"15322"	"15302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"469.0"	""	"352.8"	""	"432.5"	""	"877.3"	""	"902.7"	"897.2"	""	"247"	"11"	"30.000"	"23.000"	"1.04873788666985"	"13"	"0"	"0.0001381"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEVEKPFAIAK"	"[K].iEVEkPFAIAk.[E]"	"N-Term(TMT6plex); K5(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.74274"	"1932.21366"	"1932.21370"	"-0.02"	"-0.00001"	"10/96"	"10"	"96"	"5745633.24511719"	"HCD"	"MS2"	"7.681266"	"378.3"	"100.000"	"50.8598"	"15189"	"15189"	"15170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.3"	""	"333.7"	""	"390.0"	""	"795.7"	""	"858.1"	"841.2"	""	"248"	"1"	"30.000"	"23.000"	"10.7751093231501"	"13"	"0.0001889"	"0.0003818"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HYGPGWVSMANAGK"	"[K].hYGPGWVSMANAGk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"645.00934"	"1933.01346"	"1933.01546"	"-1.03"	"-0.00067"	"15/110"	"15"	"110"	"7643851.58410645"	"HCD"	"MS2"	"9.261763"	"282.6"	"100.000"	"38.9262"	"10337"	"10337"	"10310"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"393.8"	""	"334.7"	""	"363.4"	""	"514.4"	""	"528.7"	"545.1"	""	"1213"	"33"	"37.000"	"30.000"	"0.027405063026339"	"17"	"7.476E-05"	"0.0001991"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HYGPGWVSMANAGK"	"[K].hYGPGWVSMANAGk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"645.00940"	"1933.01364"	"1933.01546"	"-0.94"	"-0.00060"	"15/110"	"15"	"110"	"8267962.13433838"	"HCD"	"MS2"	"17.64835"	"311.3"	"100.000"	"39.0285"	"10422"	"10422"	"10398"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"419.7"	""	"359.6"	""	"413.1"	""	"565.6"	"5.6"	"583.6"	"604.3"	""	"1213"	"42"	"37.000"	"30.000"	"0.00373964868628989"	"19"	"0"	"1.902E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDLFPEADKVR"	"[K].vWDLFPEADkVR.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.03546"	"1933.09183"	"1933.09475"	"-1.51"	"-0.00097"	"9/104"	"9"	"104"	"5160226.01104736"	"HCD"	"MS2"	"9.810908"	"256.5"	"100.000"	"63.7665"	"20491"	"20491"	"20467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"514.4"	""	"411.4"	""	"395.4"	""	"385.3"	"1.4"	"345.2"	"365.6"	""	"1071"	"3"	"37.000"	"30.000"	"28.2331590791922"	"13"	"0.0003839"	"0.00176"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDLFPEADKVR"	"[K].vWDLFPEADkVR.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.03662"	"1933.09531"	"1933.09475"	"0.29"	"0.00019"	"8/104"	"8"	"104"	"7322326.25018311"	"HCD"	"MS2"	"26.77108"	"365.0"	"100.000"	"63.7752"	"20442"	"20442"	"20425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"626.5"	""	"584.3"	""	"609.0"	""	"587.2"	"7.1"	"500.0"	"528.9"	""	"1069"	"4"	"37.000"	"30.000"	"19.7673162092552"	"13"	"0.0006037"	"0.004995"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSILESLDKWER"	"[K].vSILESLDkWER.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.04315"	"1933.11490"	"1933.11588"	"-0.51"	"-0.00033"	"10/112"	"10"	"112"	"4315282.41955566"	"HCD"	"MS2"	"8.530706"	"203.5"	"100.000"	"65.7993"	"21321"	"21321"	"21299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"315.5"	""	"254.9"	"1.9"	"292.0"	""	"352.2"	""	"347.6"	"365.2"	""	"927"	"17"	"36.000"	"29.000"	"0.922677092620561"	"14"	"0"	"3.656E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSILESLDKWER"	"[K].vSILESLDkWER.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.04340"	"1933.11563"	"1933.11588"	"-0.13"	"-0.00008"	"10/112"	"10"	"112"	"4006122.91973877"	"HCD"	"MS2"	"13.84611"	"200.0"	"100.000"	"65.8998"	"21309"	"21309"	"21289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.9"	""	"251.7"	""	"260.8"	""	"369.4"	""	"346.5"	"357.8"	""	"920"	"14"	"36.000"	"29.000"	"1.87394927789892"	"13"	"0"	"2.382E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTFDQLALESPK"	"[K].iLTFDQLALESPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"645.05103"	"1933.13852"	"1933.14104"	"-1.30"	"-0.00084"	"13/126"	"13"	"126"	"8689219.91448975"	"HCD"	"MS2"	"1.018929"	"184.8"	"100.000"	"73.7589"	"24561"	"24561"	"24543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.8"	""	"245.4"	""	"268.7"	""	"324.2"	""	"355.4"	"304.3"	""	"785"	"50"	"35.000"	"28.000"	"0.000365459841121123"	"23"	"0"	"1.467E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTFDQLALESPK"	"[K].iLTFDQLALESPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8933"	"0.0000"	"1"	"1"	"1"	"967.07312"	"1933.13896"	"1933.14104"	"-1.07"	"-0.00104"	"21/126"	"21"	"126"	"951169.49005127"	"HCD"	"MS2"	"22.8105"	"64.1"	"100.000"	"73.7752"	"24568"	"24568"	"24543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.3"	""	"95.8"	""	"90.0"	""	"108.2"	"1.8"	"107.9"	"106.2"	""	"792"	"75"	"35.000"	"28.000"	"1.28438488470342E-06"	"25"	"0"	"1.705E-06"	"1.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTFDQLALESPK"	"[K].iLTFDQLALESPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"3"	"3"	"0.8868"	"0.0000"	"1"	"1"	"1"	"645.05139"	"1933.13962"	"1933.14104"	"-0.73"	"-0.00047"	"14/126"	"14"	"126"	"6524259.92138672"	"HCD"	"MS2"	"9.626108"	"138.3"	"100.000"	"74.0680"	"24688"	"24688"	"24671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"188.5"	"3.2"	"180.4"	""	"206.4"	""	"232.5"	""	"253.6"	"246.9"	""	"747"	"53"	"35.000"	"28.000"	"0.000180007502412985"	"22"	"0"	"1.035E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTFDQLALESPK"	"[K].iLTFDQLALESPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"967.07355"	"1933.13982"	"1933.14104"	"-0.63"	"-0.00061"	"13/126"	"13"	"126"	"234688.907836914"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"74.1301"	"24713"	"24713"	"24687"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.7"	""	"20.3"	""	"21.8"	""	"30.0"	""	"36.3"	"30.7"	""	"747"	"50"	"35.000"	"28.000"	"0.000339070968021553"	"19"	"0"	"6.176E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTFDQLALESPK"	"[K].iLTFDQLALESPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"645.05151"	"1933.13999"	"1933.14104"	"-0.54"	"-0.00035"	"13/126"	"13"	"126"	"9570720.74407959"	"HCD"	"MS2"	"1.417758"	"211.8"	"100.000"	"73.7778"	"24517"	"24517"	"24497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.6"	""	"285.8"	""	"301.9"	""	"374.7"	""	"398.7"	"360.4"	""	"749"	"47"	"35.000"	"28.000"	"0.000707052760236563"	"22"	"0"	"2.717E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTFDQLALESPK"	"[K].iLTFDQLALESPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"967.07367"	"1933.14006"	"1933.14104"	"-0.50"	"-0.00049"	"10/126"	"10"	"126"	"1277333.87475586"	"HCD"	"MS2"	"100"	"86.0"	"100.000"	"73.8143"	"24532"	"24532"	"24513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.7"	""	"104.8"	""	"130.5"	""	"146.6"	""	"173.2"	"155.4"	""	"749"	"59"	"35.000"	"28.000"	"4.5232628124749E-05"	"24"	"0"	"1.185E-05"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTFDQLALESPK"	"[K].iLTFDQLALESPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"967.07416"	"1933.14104"	"1933.14104"	"0.00"	"0.00000"	"12/126"	"12"	"126"	"208540.811401367"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"74.1419"	"24666"	"24666"	"24641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.5"	""	"17.7"	""	"21.4"	""	"27.9"	"1.9"	"28.3"	"26.1"	""	"742"	"44"	"35.000"	"28.000"	"0.00146681016045275"	"20"	"0.0001859"	"0.0003233"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILTFDQLALESPK"	"[K].iLTFDQLALESPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"645.05225"	"1933.14219"	"1933.14104"	"0.59"	"0.00038"	"13/126"	"13"	"126"	"5430365.34265137"	"HCD"	"MS2"	"0"	"129.0"	"100.000"	"74.0820"	"24642"	"24642"	"24625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.5"	""	"162.7"	""	"192.6"	""	"216.4"	""	"252.1"	"235.1"	""	"737"	"52"	"35.000"	"28.000"	"0.000237923583399271"	"24"	"0"	"4.77E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDNFKPLSLAK"	"[K].iDNFkPLSLAk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.07440"	"1933.20865"	"1933.20895"	"-0.15"	"-0.00010"	"10/108"	"10"	"108"	"5387279.58868408"	"HCD"	"MS2"	"42.0107"	"366.4"	"100.000"	"53.8600"	"16451"	"16451"	"16439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"465.3"	""	"435.2"	""	"469.2"	""	"640.4"	""	"719.3"	"751.7"	""	"289"	"9"	"31.000"	"24.000"	"1.87874504025811"	"13"	"0"	"0.000141"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.9718"	"0.0000"	"1"	"1"	"1"	"967.54150"	"1934.07573"	"1934.07877"	"-1.57"	"-0.00152"	"10/118"	"10"	"118"	"855843.031188965"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"71.6459"	"23647"	"23647"	"23619"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.9"	""	"84.0"	""	"82.7"	""	"97.6"	""	"112.6"	"101.6"	""	"1084"	"71"	"37.000"	"30.000"	"4.27562183749256E-06"	"19"	"0"	"4.953E-06"	"1.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"967.54193"	"1934.07659"	"1934.07877"	"-1.13"	"-0.00109"	"11/118"	"11"	"118"	"213417.928833008"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"72.2598"	"23898"	"23898"	"23873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.1"	""	"25.2"	""	"26.9"	""	"27.8"	""	"36.6"	"33.4"	""	"1107"	"20"	"37.000"	"30.000"	"0.565090004232201"	"14"	"0.0006037"	"0.003947"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"967.54199"	"1934.07671"	"1934.07877"	"-1.07"	"-0.00103"	"16/118"	"16"	"118"	"1095530.41156006"	"HCD"	"MS2"	"0"	"77.7"	"100.000"	"71.5752"	"23670"	"23670"	"23642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.1"	""	"116.3"	""	"112.5"	""	"116.7"	"0.2"	"140.6"	"140.8"	""	"1109"	"44"	"37.000"	"30.000"	"0.00224854482906129"	"16"	"0"	"3.211E-05"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"967.54205"	"1934.07683"	"1934.07877"	"-1.00"	"-0.00097"	"10/118"	"10"	"118"	"2731443.453125"	"HCD"	"MS2"	"0"	"169.3"	"100.000"	"71.9329"	"23764"	"23764"	"23745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"221.9"	""	"264.3"	""	"238.4"	""	"271.3"	"3.0"	"290.1"	"314.1"	""	"1109"	"62"	"37.000"	"30.000"	"3.62995758520304E-05"	"17"	"0"	"7.091E-06"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"645.36389"	"1934.07712"	"1934.07877"	"-0.85"	"-0.00055"	"12/118"	"12"	"118"	"19580191.2105713"	"HCD"	"MS2"	"0"	"248.5"	"55.641"	"71.8439"	"23779"	"23779"	"23769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.6"	""	"357.3"	"3.8"	"368.5"	""	"396.6"	""	"463.3"	"460.3"	""	"1099"	"41"	"37.000"	"30.000"	"0.00438498080653753"	"22"	"0"	"4.173E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"967.54224"	"1934.07720"	"1934.07877"	"-0.81"	"-0.00079"	"10/118"	"10"	"118"	"2942707.70141602"	"HCD"	"MS2"	"0"	"186.8"	"100.000"	"71.8487"	"23781"	"23781"	"23769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.6"	""	"273.9"	""	"267.9"	""	"314.7"	""	"335.6"	"350.3"	""	"1099"	"42"	"37.000"	"30.000"	"0.00335712642685612"	"15"	"0"	"1.62E-05"	"1.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"645.36395"	"1934.07730"	"1934.07877"	"-0.76"	"-0.00049"	"11/118"	"11"	"118"	"2650537.88592529"	"HCD"	"MS2"	"2.833381"	"73.8"	"100.000"	"72.1521"	"23905"	"23905"	"23887"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.1"	""	"107.0"	""	"100.5"	""	"117.2"	""	"137.9"	"143.9"	""	"1109"	"34"	"37.000"	"30.000"	"0.0198564474373412"	"16"	"0"	"2.786E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.8393"	"0.0000"	"1"	"1"	"1"	"645.36395"	"1934.07730"	"1934.07877"	"-0.76"	"-0.00049"	"14/118"	"14"	"118"	"20180991.5401611"	"HCD"	"MS2"	"4.18894"	"239.8"	"52.300"	"71.9306"	"23763"	"23763"	"23745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"326.0"	""	"339.9"	""	"348.4"	""	"384.0"	"0.9"	"424.5"	"448.0"	""	"1109"	"56"	"37.000"	"30.000"	"0.000136427383649986"	"25"	"0"	"1.171E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"967.54248"	"1934.07768"	"1934.07877"	"-0.56"	"-0.00054"	"11/118"	"11"	"118"	"214089.922424316"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"72.1753"	"23915"	"23915"	"23887"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.4"	""	"23.1"	""	"23.6"	""	"27.8"	""	"27.3"	"36.0"	""	"1127"	"36"	"37.000"	"30.000"	"0.0132097293743278"	"17"	"0.0001889"	"0.00111"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.8704"	"0.0000"	"1"	"1"	"1"	"645.36414"	"1934.07785"	"1934.07877"	"-0.47"	"-0.00031"	"14/118"	"14"	"118"	"5582836.36413574"	"HCD"	"MS2"	"2.822224"	"136.2"	"100.000"	"71.6228"	"23637"	"23637"	"23619"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"188.6"	""	"187.4"	""	"215.0"	""	"227.7"	"1.6"	"238.6"	"230.2"	""	"1118"	"54"	"37.000"	"30.000"	"0.000222030076153417"	"23"	"0"	"7.794E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"645.36420"	"1934.07804"	"1934.07877"	"-0.38"	"-0.00024"	"13/118"	"13"	"118"	"2610320.35247803"	"HCD"	"MS2"	"9.380667"	"71.9"	"100.000"	"72.2435"	"23891"	"23891"	"23873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.9"	""	"94.0"	"2.1"	"100.4"	""	"118.6"	"2.1"	"136.1"	"136.7"	""	"1118"	"47"	"37.000"	"30.000"	"0.00114659965796349"	"23"	"0"	"1.774E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPENFPFVVLGNK"	"[R].dPENFPFVVLGNk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"645.36438"	"1934.07859"	"1934.07877"	"-0.09"	"-0.00006"	"12/118"	"12"	"118"	"5978239.95715332"	"HCD"	"MS2"	"4.317368"	"143.7"	"100.000"	"71.5520"	"23660"	"23660"	"23642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.3"	""	"211.5"	""	"213.0"	""	"226.0"	""	"257.6"	"267.7"	""	"1119"	"38"	"37.000"	"30.000"	"0.0089084078278513"	"18"	"0"	"2.172E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPQSMVWLPVLHR"	"[R].lEPQSMVWLPVLHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"645.36676"	"1934.08573"	"1934.08834"	"-1.35"	"-0.00087"	"15/130"	"15"	"130"	"2009813.78753662"	"HCD"	"MS2"	"52.46129"	"58.6"	"100.000"	"68.9855"	"22561"	"22561"	"22538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.3"	""	"69.0"	""	"75.3"	""	"93.8"	"3.8"	"120.8"	"120.6"	""	"1091"	"10"	"37.000"	"30.000"	"5.17362271730639"	"19"	"0"	"9.267E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPQSMVWLPVLHR"	"[R].lEPQSMVWLPVLHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.36682"	"1934.08591"	"1934.08834"	"-1.26"	"-0.00081"	"17/130"	"17"	"130"	"4674355.75799561"	"HCD"	"MS2"	"3.636259"	"48.4"	"100.000"	"68.5069"	"22417"	"22417"	"22394"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.0"	""	"58.7"	""	"75.5"	""	"81.1"	"0.6"	"92.4"	"93.4"	""	"1091"	"44"	"37.000"	"30.000"	"0.00234852266023228"	"15"	"0"	"6.072E-06"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPQSMVWLPVLHR"	"[R].lEPQSMVWLPVLHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"645.36768"	"1934.08847"	"1934.08834"	"0.07"	"0.00004"	"14/130"	"14"	"130"	"4716894.98754883"	"HCD"	"MS2"	"13.1015"	"70.3"	"100.000"	"68.6672"	"22431"	"22431"	"22410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.0"	""	"82.5"	""	"94.9"	""	"126.5"	""	"140.0"	"149.7"	""	"1065"	"37"	"37.000"	"30.000"	"0.0109728542881628"	"18"	"0"	"8.03E-06"	"1.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGYEIPVDMLCK"	"[K].yGYEIPVDMLck.[R]"	"N-Term(TMT6plex); C11(Methylthio); K12(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.66473"	"1934.97965"	"1934.98302"	"-1.74"	"-0.00112"	"11/96"	"11"	"96"	"469842.280944824"	"HCD"	"MS2"	"39.34016"	"18.7"	"100.000"	"80.4107"	"27213"	"27213"	"27185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.0"	""	"23.6"	""	"31.5"	""	"30.7"	"2.2"	"34.0"	"32.0"	""	"1012"	"5"	"37.000"	"30.000"	"15.7815812955153"	"13"	"0.0001889"	"0.0007669"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGYEIPVDMLCK"	"[K].yGYEIPVDMLck.[R]"	"N-Term(TMT6plex); C11(Methylthio); K12(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"645.66565"	"1934.98239"	"1934.98302"	"-0.32"	"-0.00021"	"10/96"	"10"	"96"	"1506379.77642822"	"HCD"	"MS2"	"9.909925"	"48.2"	"100.000"	"80.0668"	"27123"	"27123"	"27103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.7"	""	"75.4"	""	"73.6"	""	"55.1"	"0.7"	"87.5"	"85.1"	""	"1035"	"30"	"37.000"	"30.000"	"0.0513937555057833"	"24"	"0"	"0.0001125"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGYEIPVDMLCK"	"[K].yGYEIPVDMLck.[R]"	"N-Term(TMT6plex); C11(Methylthio); K12(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"967.99493"	"1934.98259"	"1934.98302"	"-0.22"	"-0.00021"	"13/96"	"13"	"96"	"270702.346008301"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"80.0578"	"27069"	"27069"	"27041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.1"	""	"38.5"	""	"39.4"	""	"25.6"	""	"33.6"	"37.0"	""	"1031"	"31"	"37.000"	"30.000"	"0.0431746344936408"	"17"	"0.0001308"	"0.0002686"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGYEIPVDMLCK"	"[K].yGYEIPVDMLck.[R]"	"N-Term(TMT6plex); C11(Methylthio); K12(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"967.99500"	"1934.98271"	"1934.98302"	"-0.16"	"-0.00015"	"10/96"	"10"	"96"	"345555.861999512"	"HCD"	"MS2"	"0"	"30.0"	"100.000"	"80.0688"	"27124"	"27124"	"27103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.9"	""	"45.3"	""	"56.6"	""	"33.2"	""	"53.7"	"40.5"	""	"1037"	"22"	"37.000"	"30.000"	"0.292246124545757"	"16"	"0.0001889"	"0.001009"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGYEIPVDMLCK"	"[K].yGYEIPVDMLck.[R]"	"N-Term(TMT6plex); C11(Methylthio); K12(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"645.66626"	"1934.98423"	"1934.98302"	"0.62"	"0.00040"	"15/96"	"15"	"96"	"1437150.18078613"	"HCD"	"MS2"	"5.367404"	"46.2"	"100.000"	"80.0948"	"27084"	"27084"	"27057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.6"	""	"66.9"	""	"73.4"	""	"63.3"	""	"71.1"	"86.2"	""	"1034"	"35"	"37.000"	"30.000"	"0.0158303509521808"	"18"	"0"	"0.0001106"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSYQSVTTDDWK"	"[K].fSYQSVTTDDWk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"967.99744"	"1934.98760"	"1934.99001"	"-1.25"	"-0.00121"	"14/120"	"14"	"120"	"667460.453125"	"HCD"	"MS2"	"0"	"63.5"	"100.000"	"55.7013"	"17202"	"17202"	"17173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.6"	""	"77.6"	""	"87.4"	""	"109.6"	"0.9"	"108.1"	"115.7"	""	"1055"	"49"	"37.000"	"30.000"	"0.000714862415015171"	"16"	"0"	"3.957E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLNQALLDLHALGSAR"	"[K].nLNQALLDLHALGSAR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"Q7TP54"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1"	"Q7TP54; P02793"	"Rho family-interacting cell polarization regulator 2 OS=Rattus norvegicus OX=10116 GN=Ripor2 PE=1 SV=1; Ferritin light chain 1 OS=Rattus norvegicus OX=10116 GN=Ftl1 PE=1 SV=3"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"645.70288"	"1935.09409"	"1935.09732"	"-1.67"	"-0.00108"	"13/162"	"13"	"162"	"2943856.66827393"	"HCD"	"MS2"	"12.60216"	"94.0"	"100.000"	"59.8091"	"18875"	"18875"	"18853"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.8"	""	"115.4"	""	"151.0"	""	"154.7"	""	"172.7"	"179.9"	""	"1038"	"44"	"37.000"	"30.000"	"0.00211917761506667"	"20"	"0"	"6.647E-06"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLLTAGAPALGIGVK"	"[R].vPLLTAGAPALGIGVk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P18910"	"Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus OX=10116 GN=Npr1 PE=1 SV=1"	"P18910"	"Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus OX=10116 GN=Npr1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.75177"	"1935.24076"	"1935.24069"	"0.03"	"0.00002"	"15/120"	"15"	"120"	"2335976.1272583"	"HCD"	"MS2"	"46.3285"	"62.3"	"100.000"	"74.7508"	"24966"	"24966"	"24943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.0"	""	"62.4"	""	"70.8"	""	"130.2"	"2.0"	"140.9"	"120.9"	""	"117"	"16"	"27.000"	"20.000"	"0.152109334445168"	"13"	"7.476E-05"	"0.0002018"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLHPLASETFVSK"	"[K].cLHPLASETFVSk.[D]"	"N-Term(TMT6plex); C1(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.01984"	"1936.04496"	"1936.04365"	"0.68"	"0.00044"	"18/106"	"18"	"106"	"10667828.454895"	"HCD"	"MS2"	"28.58551"	"322.8"	"100.000"	"47.1585"	"13685"	"13685"	"13656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"536.6"	""	"434.6"	""	"473.0"	""	"434.6"	"4.5"	"578.3"	"594.1"	""	"1202"	"56"	"37.000"	"30.000"	"0.000154480786544409"	"16"	"0"	"8.234E-06"	"1.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLHPLASETFVSK"	"[K].cLHPLASETFVSk.[D]"	"N-Term(TMT6plex); C1(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.02020"	"1936.04605"	"1936.04365"	"1.24"	"0.00080"	"11/106"	"11"	"106"	"10696668.0460815"	"HCD"	"MS2"	"28.39132"	"307.2"	"100.000"	"47.4430"	"13849"	"13849"	"13826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"520.5"	""	"396.8"	""	"446.8"	""	"448.7"	"10.3"	"553.1"	"530.9"	""	"1205"	"64"	"37.000"	"30.000"	"2.59990243788729E-05"	"16"	"0"	"4.749E-06"	"1.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVAGEIVLITGAGHGIGR"	"[K].sVAGEIVLITGAGHGIGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.04529"	"1936.12131"	"1936.11773"	"1.85"	"0.00120"	"18/154"	"18"	"154"	"6144079.9185791"	"HCD"	"MS2"	"7.458467"	"151.6"	"100.000"	"55.6725"	"17136"	"17136"	"17115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.3"	"3.6"	"178.9"	""	"205.9"	""	"240.5"	"14.4"	"287.1"	"286.7"	""	"826"	"50"	"36.000"	"29.000"	"0.000413952063326172"	"16"	"0"	"1.64E-06"	"1.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVAGEIVLITGAGHGIGR"	"[K].sVAGEIVLITGAGHGIGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.04559"	"1936.12223"	"1936.11773"	"2.32"	"0.00150"	"20/154"	"20"	"154"	"5767616.52020264"	"HCD"	"MS2"	"8.758424"	"157.4"	"100.000"	"55.8119"	"17247"	"17247"	"17221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"223.7"	""	"231.8"	""	"232.7"	""	"209.2"	"5.9"	"289.1"	"298.5"	""	"822"	"42"	"36.000"	"29.000"	"0.00254004740456889"	"15"	"0"	"2.641E-06"	"1.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDLGEQHFK"	"[R].fkDLGEQHFk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"484.78619"	"1936.12295"	"1936.12594"	"-1.55"	"-0.00075"	"6/94"	"6"	"94"	"326513459.664063"	"HCD"	"MS2"	"12.71452"	"2047.0"	"16.044"	"37.0466"	"9565"	"9565"	"9546"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5196.4"	""	"3875.8"	""	"3088.1"	""	"2274.1"	"23.5"	"2506.9"	"2284.8"	""	"799"	"10"	"36.000"	"29.000"	"3.63510352416585"	"13"	"0.0001889"	"0.0009342"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDLGEQHFK"	"[R].fkDLGEQHFk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"3"	"484.78641"	"1936.12380"	"1936.12594"	"-1.11"	"-0.00054"	"6/94"	"6"	"94"	"22261536.7979736"	"HCD"	"MS2"	"51.26995"	"466.6"	"56.560"	"37.9170"	"9966"	"9966"	"9937"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"581.5"	""	"521.7"	""	"691.4"	""	"501.2"	"5.2"	"1394.2"	"747.7"	""	"802"	"3"	"36.000"	"29.000"	"19.2816578728341"	"13"	"0.0006037"	"0.005135"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDLGEQHFK"	"[R].fkDLGEQHFk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"484.78641"	"1936.12380"	"1936.12594"	"-1.11"	"-0.00054"	"13/94"	"13"	"94"	"409881779.408203"	"HCD"	"MS2"	"8.658978"	"1889.5"	"12.547"	"37.1588"	"9655"	"9655"	"9638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4784.2"	""	"3608.8"	""	"2900.3"	""	"2095.4"	"10.1"	"2223.2"	"2142.3"	""	"802"	"11"	"36.000"	"29.000"	"3.07004239371414"	"13"	"0.0002277"	"0.001133"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDLGEQHFK"	"[R].fkDLGEQHFk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"968.56580"	"1936.12432"	"1936.12594"	"-0.84"	"-0.00081"	"5/94"	"5"	"94"	"205400.29083252"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"37.4128"	"9759"	"9759"	"9729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.5"	""	"43.2"	""	"34.6"	""	"23.1"	""	"28.3"	"24.6"	""	"791"	"20"	"35.000"	"28.000"	"0.40658044590902"	"22"	"0.00423"	"0.1082"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDLGEQHFK"	"[R].fkDLGEQHFk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"646.04639"	"1936.12461"	"1936.12594"	"-0.69"	"-0.00045"	"6/94"	"6"	"94"	"75863338.75"	"HCD"	"MS2"	"8.806149"	"1102.2"	"25.636"	"37.1977"	"9671"	"9671"	"9654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2776.0"	""	"2051.2"	""	"1707.0"	""	"1220.1"	"3.5"	"1324.3"	"1282.8"	""	"803"	"31"	"36.000"	"29.000"	"0.0328613612436118"	"21"	"0"	"7.566E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDLGEQHFK"	"[R].fkDLGEQHFk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"646.04639"	"1936.12461"	"1936.12594"	"-0.69"	"-0.00045"	"11/94"	"11"	"94"	"52844889.1872559"	"HCD"	"MS2"	"10.65332"	"2114.1"	"64.441"	"37.0903"	"9583"	"9583"	"9562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5259.4"	""	"3912.0"	""	"3257.7"	""	"2362.8"	""	"2622.5"	"2471.4"	""	"803"	"24"	"36.000"	"29.000"	"0.15692261966065"	"17"	"0"	"0.0001166"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDLGEQHFK"	"[R].fkDLGEQHFk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.04651"	"1936.12497"	"1936.12594"	"-0.50"	"-0.00032"	"7/94"	"7"	"94"	"6499551.96582031"	"HCD"	"MS2"	"0"	"410.7"	"96.173"	"37.5135"	"9800"	"9800"	"9777"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"824.6"	""	"669.8"	""	"578.4"	""	"534.7"	""	"627.6"	"651.0"	""	"798"	"6"	"36.000"	"29.000"	"9.3104976685012"	"13"	"0.0001889"	"0.0004036"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDLGEQHFK"	"[R].fkDLGEQHFk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.04663"	"1936.12534"	"1936.12594"	"-0.31"	"-0.00020"	"7/94"	"7"	"94"	"6238080.09106445"	"HCD"	"MS2"	"0"	"356.3"	"89.629"	"37.4020"	"9711"	"9711"	"9688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"692.7"	""	"564.1"	""	"508.3"	""	"489.6"	""	"566.8"	"547.5"	""	"796"	"11"	"35.000"	"29.000"	"3.13244224298649"	"13"	"0.0001308"	"0.0002083"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDLGEQHFK"	"[R].fkDLGEQHFk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.8462"	"0.0000"	"1"	"1"	"1"	"484.78760"	"1936.12856"	"1936.12594"	"1.35"	"0.00065"	"5/94"	"5"	"94"	"237048798.496094"	"HCD"	"MS2"	"5.323589"	"332.9"	"3.568"	"37.3471"	"9689"	"9689"	"9672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"789.4"	""	"602.9"	""	"528.5"	""	"366.1"	"3.1"	"439.2"	"404.5"	""	"785"	"13"	"35.000"	"28.000"	"2.19199551434206"	"15"	"0.0008731"	"0.008413"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDLGEQHFK"	"[R].fkDLGEQHFk.[G]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"484.78781"	"1936.12942"	"1936.12594"	"1.79"	"0.00087"	"13/94"	"13"	"94"	"243867668.696289"	"HCD"	"MS2"	"4.869197"	"392.5"	"4.207"	"37.4587"	"9778"	"9778"	"9761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"922.0"	""	"724.6"	""	"610.4"	""	"447.2"	"3.8"	"512.8"	"473.5"	""	"748"	"11"	"35.000"	"28.000"	"2.96395497599697"	"13"	"0.0001889"	"0.0006795"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPLLSDLNHQISK"	"[R].iPLLSDLNHQISk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"646.05933"	"1936.16343"	"1936.16317"	"0.13"	"0.00009"	"15/120"	"15"	"120"	"4465546.47027588"	"HCD"	"MS2"	"36.30433"	"171.8"	"100.000"	"60.6732"	"19228"	"19228"	"19203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.4"	""	"191.6"	""	"227.1"	""	"301.2"	"0.4"	"347.5"	"369.1"	""	"510"	"27"	"34.000"	"27.000"	"0.0521843382364792"	"15"	"0"	"3.007E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPLIGVQVPEEK"	"[K].vLGPLIGVQVPEEk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"968.59540"	"1936.18352"	"1936.18832"	"-2.48"	"-0.00240"	"17/116"	"17"	"116"	"1096742.527771"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"67.3742"	"21955"	"21955"	"21938"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.9"	""	"80.3"	""	"86.6"	""	"81.5"	""	"92.9"	"97.1"	""	"373"	"50"	"32.000"	"25.000"	"0.000206385335711835"	"16"	"0"	"1.899E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPLIGVQVPEEK"	"[K].vLGPLIGVQVPEEk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"968.59576"	"1936.18425"	"1936.18832"	"-2.10"	"-0.00203"	"18/116"	"18"	"116"	"935157.423156738"	"HCD"	"MS2"	"0"	"51.6"	"100.000"	"67.4852"	"21950"	"21950"	"21929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.5"	""	"83.3"	""	"74.2"	""	"82.4"	""	"82.3"	"85.8"	""	"366"	"52"	"32.000"	"25.000"	"0.000117882975589277"	"16"	"0"	"5.329E-06"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPLIGVQVPEEK"	"[K].vLGPLIGVQVPEEk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.06714"	"1936.18686"	"1936.18832"	"-0.75"	"-0.00049"	"13/116"	"13"	"116"	"8952660.56213379"	"HCD"	"MS2"	"8.378771"	"213.9"	"100.000"	"67.5544"	"22028"	"22028"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"313.4"	""	"282.8"	""	"318.4"	""	"352.3"	""	"371.5"	"386.7"	""	"366"	"46"	"32.000"	"25.000"	"0.000444069647400082"	"15"	"0"	"4.49E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPLIGVQVPEEK"	"[K].vLGPLIGVQVPEEk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.06769"	"1936.18851"	"1936.18832"	"0.10"	"0.00006"	"13/116"	"13"	"116"	"8828480.72271729"	"HCD"	"MS2"	"21.9406"	"253.6"	"100.000"	"67.7136"	"22043"	"22043"	"22029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.1"	""	"300.3"	""	"342.1"	""	"446.5"	""	"491.1"	"507.3"	""	"360"	"40"	"32.000"	"25.000"	"0.00164540383464645"	"15"	"0"	"2.001E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPLIGVQVPEEK"	"[K].vLGPLIGVQVPEEk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.06842"	"1936.19071"	"1936.18832"	"1.23"	"0.00080"	"10/116"	"10"	"116"	"4722524.75561523"	"HCD"	"MS2"	"0"	"129.4"	"100.000"	"67.4389"	"21931"	"21931"	"21918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.5"	""	"187.0"	""	"181.9"	""	"214.8"	""	"217.1"	"213.7"	""	"330"	"49"	"32.000"	"25.000"	"0.000192080794852731"	"16"	"0"	"1.07E-05"	"1.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPLIGVQVPEEK"	"[K].vLGPLIGVQVPEEk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"0"	"3"	"3"	"0.9825"	"0.0000"	"1"	"1"	"1"	"646.06885"	"1936.19199"	"1936.18832"	"1.90"	"0.00122"	"16/116"	"16"	"116"	"3458546.01202393"	"HCD"	"MS2"	"40.20967"	"101.4"	"100.000"	"67.2637"	"21911"	"21911"	"21896"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.9"	""	"150.2"	""	"140.7"	""	"156.6"	"1.0"	"170.1"	"161.0"	""	"322"	"57"	"32.000"	"25.000"	"3.49804889797062E-05"	"17"	"0"	"2.114E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQLADSFHLQQFFR"	"[R].aQLADSFHLQQFFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7818"	"0.0000"	"1"	"1"	"1"	"646.34552"	"1937.02201"	"1937.02310"	"-0.56"	"-0.00036"	"16/130"	"16"	"130"	"4622180.38775635"	"HCD"	"MS2"	"18.59947"	"114.1"	"100.000"	"63.4136"	"20347"	"20347"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.7"	""	"155.1"	""	"159.0"	""	"168.4"	""	"212.1"	"241.3"	""	"1177"	"55"	"37.000"	"30.000"	"0.000192639998936196"	"28"	"0"	"1.937E-06"	"1.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQLADSFHLQQFFR"	"[R].aQLADSFHLQQFFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"646.34619"	"1937.02402"	"1937.02310"	"0.48"	"0.00031"	"18/130"	"18"	"130"	"4167084.4095459"	"HCD"	"MS2"	"24.88492"	"101.5"	"100.000"	"63.3713"	"20277"	"20277"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.2"	""	"144.4"	""	"126.0"	""	"166.7"	""	"200.0"	"216.6"	""	"1161"	"42"	"37.000"	"30.000"	"0.00405323910566798"	"19"	"0"	"3.098E-06"	"1.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFSLTTFSPSGK"	"[R].gYSFSLTTFSPSGk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"969.02307"	"1937.03887"	"1937.04205"	"-1.64"	"-0.00159"	"12/122"	"12"	"122"	"285976.322937012"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"61.7843"	"19682"	"19682"	"19651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.4"	""	"41.0"	""	"46.8"	""	"44.0"	""	"50.8"	"55.7"	""	"1195"	"48"	"37.000"	"30.000"	"0.000944795703464054"	"16"	"0"	"1.166E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFSLTTFSPSGK"	"[R].gYSFSLTTFSPSGk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"969.02448"	"1937.04167"	"1937.04205"	"-0.19"	"-0.00019"	"13/122"	"13"	"122"	"286940.71496582"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"61.6024"	"19554"	"19554"	"19529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.3"	""	"34.0"	""	"36.3"	""	"47.6"	""	"51.4"	"59.4"	""	"1224"	"44"	"37.000"	"30.000"	"0.00262271694483233"	"15"	"0"	"6.096E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFSLTTFSPSGK"	"[R].gYSFSLTTFSPSGk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"646.35248"	"1937.04288"	"1937.04205"	"0.43"	"0.00028"	"14/122"	"14"	"122"	"4429710.13043213"	"HCD"	"MS2"	"28.74804"	"133.2"	"100.000"	"61.6898"	"19643"	"19643"	"19619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.2"	""	"190.4"	""	"195.5"	""	"204.8"	""	"264.9"	"252.8"	""	"1199"	"45"	"37.000"	"30.000"	"0.00175302935051708"	"17"	"0"	"9.746E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFSLTTFSPSGK"	"[R].gYSFSLTTFSPSGk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"3"	"3"	"0.9808"	"0.0000"	"1"	"1"	"1"	"646.35382"	"1937.04691"	"1937.04205"	"2.51"	"0.00162"	"14/122"	"14"	"122"	"4067830.11358643"	"HCD"	"MS2"	"30.08593"	"124.4"	"100.000"	"61.5333"	"19526"	"19526"	"19497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.1"	""	"154.9"	""	"183.5"	""	"212.3"	"1.5"	"248.0"	"229.4"	""	"1180"	"52"	"37.000"	"30.000"	"0.000343440898484814"	"16"	"0"	"7.909E-06"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKEGMSIVEAMER"	"[K].vkEGMSIVEAMER.[F]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.35693"	"1937.05625"	"1937.06002"	"-1.95"	"-0.00126"	"13/136"	"13"	"136"	"3393820.3104248"	"HCD"	"MS2"	"24.23829"	"176.2"	"100.000"	"51.2997"	"15369"	"15369"	"15346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"381.8"	""	"296.1"	""	"281.3"	""	"184.6"	"1.3"	"241.6"	"274.6"	""	"1144"	"22"	"37.000"	"30.000"	"0.383173996586253"	"14"	"0"	"2.269E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKEGMSIVEAMER"	"[K].vkEGMSIVEAMER.[F]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.35773"	"1937.05863"	"1937.06002"	"-0.72"	"-0.00047"	"16/136"	"16"	"136"	"3672609.17034912"	"HCD"	"MS2"	"12.2812"	"189.0"	"100.000"	"51.4718"	"15490"	"15490"	"15462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"414.7"	""	"307.3"	""	"309.3"	""	"220.7"	"4.8"	"252.6"	"271.7"	""	"1115"	"24"	"37.000"	"30.000"	"0.210496496440919"	"14"	"0"	"9.586E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANLAASFGKPINF"	"[R].eANLAASFGkPINF.[-]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"646.36871"	"1937.09159"	"1937.08967"	"0.99"	"0.00064"	"13/136"	"13"	"136"	"3105530.68664551"	"HCD"	"MS2"	"14.75349"	"95.6"	"100.000"	"65.7502"	"21248"	"21248"	"21225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"172.6"	""	"163.0"	""	"143.3"	""	"133.2"	"0.7"	"147.6"	"142.4"	""	"962"	"39"	"36.000"	"29.000"	"0.00674753391894302"	"17"	"0"	"3.432E-05"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYPIPQVIWYK"	"[R].nGYPIPQVIWYk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"646.36884"	"1937.09195"	"1937.09369"	"-0.90"	"-0.00058"	"10/112"	"10"	"112"	"1550754.82489014"	"HCD"	"MS2"	"45.68581"	"49.3"	"100.000"	"74.7417"	"24911"	"24911"	"24881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.9"	""	"50.7"	""	"59.4"	""	"91.5"	""	"105.4"	"99.9"	""	"960"	"25"	"36.000"	"29.000"	"0.150397714767148"	"14"	"0.0001889"	"0.0006776"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYPIPQVIWYK"	"[R].nGYPIPQVIWYk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"969.05005"	"1937.09282"	"1937.09369"	"-0.45"	"-0.00044"	"10/112"	"10"	"112"	"246823.81439209"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"74.7924"	"24931"	"24931"	"24913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.7"	""	"15.7"	""	"19.6"	""	"26.8"	""	"31.7"	"35.2"	""	"956"	"26"	"36.000"	"29.000"	"0.133176591860503"	"14"	"0.0001889"	"0.0005154"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYPIPQVIWYK"	"[R].nGYPIPQVIWYk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"969.05011"	"1937.09294"	"1937.09369"	"-0.39"	"-0.00037"	"6/112"	"6"	"112"	"239700.777404785"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"74.7922"	"24983"	"24983"	"24959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.2"	""	"24.5"	""	"18.2"	""	"27.9"	""	"35.8"	"35.2"	""	"948"	"31"	"36.000"	"29.000"	"0.0393349263801836"	"14"	"0.0001889"	"0.0005276"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYPIPQVIWYK"	"[R].nGYPIPQVIWYk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"646.36938"	"1937.09360"	"1937.09369"	"-0.05"	"-0.00003"	"11/112"	"11"	"112"	"2123540.06231689"	"HCD"	"MS2"	"40.70796"	"63.9"	"100.000"	"74.7877"	"24981"	"24981"	"24959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.7"	""	"71.7"	""	"76.4"	""	"122.3"	"1.7"	"136.5"	"130.1"	""	"951"	"30"	"36.000"	"29.000"	"0.0523781941686943"	"14"	"0.0001889"	"0.000449"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANLAASFGKPINF"	"[R].eANLAASFGkPINF.[-]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"646.36993"	"1937.09525"	"1937.08967"	"2.88"	"0.00186"	"14/136"	"14"	"136"	"3056151.67633057"	"HCD"	"MS2"	"15.59298"	"88.4"	"100.000"	"65.6498"	"21260"	"21260"	"21235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.0"	""	"134.8"	""	"140.4"	""	"125.9"	"0.6"	"138.4"	"127.4"	""	"951"	"25"	"36.000"	"29.000"	"0.156009311875288"	"16"	"7.476E-05"	"0.0001935"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPPPDGHYVDVVR"	"[R].kPPPDGHYVDVVR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.37463"	"1937.10935"	"1937.10090"	"4.36"	"0.00282"	"7/130"	"7"	"130"	"432773.073669434"	"HCD"	"MS2"	"56.4285"	"32.1"	"100.000"	"30.7087"	"6982"	"6982"	"6952"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.6"	""	"44.3"	""	"50.0"	""	"42.8"	""	"60.2"	"64.6"	""	"872"	"4"	"36.000"	"29.000"	"16.0135083017165"	"13"	"0.001058"	"0.01393"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPLIGVQVPEEK"	"[K].vLGPLIGVqVPEEk.[V]"	"N-Term(TMT6plex); Q9(Deamidated); K14(TMT6plex)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.40161"	"1937.19028"	"1937.17234"	"9.26"	"0.00598"	"13/116"	"13"	"116"	"2640201.80554199"	"HCD"	"MS2"	"68.27819"	"88.3"	"100.000"	"67.2453"	"21904"	"21904"	"21888"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.7"	""	"126.1"	""	"127.7"	""	"139.2"	""	"152.9"	"149.3"	""	"329"	"43"	"32.000"	"25.000"	"0.00081501556387388"	"15"	"0"	"7.192E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLmAHDFTk.[F]"	"N-Term(TMT6plex); M6(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"646.67645"	"1938.01480"	"1938.02291"	"-4.18"	"-0.00270"	"15/124"	"15"	"124"	"3321234.2722168"	"HCD"	"MS2"	"28.34798"	"172.6"	"100.000"	"50.3502"	"14981"	"14981"	"14964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.0"	""	"237.9"	""	"251.0"	""	"264.4"	"0.5"	"343.0"	"313.4"	""	"1199"	"44"	"37.000"	"30.000"	"0.00217164677550811"	"22"	"0"	"7.335E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLmAHDFTk.[F]"	"N-Term(TMT6plex); M6(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.6905"	"0.0000"	"1"	"1"	"1"	"646.67841"	"1938.02066"	"1938.02291"	"-1.16"	"-0.00075"	"12/124"	"12"	"124"	"6494824.26934814"	"HCD"	"MS2"	"13.35798"	"289.2"	"100.000"	"50.3104"	"15016"	"15016"	"14998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"349.9"	""	"395.2"	""	"427.9"	""	"461.3"	"2.1"	"553.9"	"552.2"	""	"1249"	"42"	"37.000"	"30.000"	"0.00356067588039327"	"28"	"0"	"0.0001011"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLmAHDFTk.[F]"	"N-Term(TMT6plex); M6(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"646.67847"	"1938.02085"	"1938.02291"	"-1.07"	"-0.00069"	"13/124"	"13"	"124"	"5077690.5536499"	"HCD"	"MS2"	"0"	"228.0"	"100.000"	"50.0525"	"14862"	"14862"	"14849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"273.9"	""	"315.6"	""	"336.9"	""	"376.8"	"2.0"	"421.7"	"434.6"	""	"1249"	"46"	"37.000"	"30.000"	"0.00152241285607129"	"26"	"0"	"5.874E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLMAHDFTk.[F]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.4324"	"0.0000"	"1"	"1"	"1"	"646.67938"	"1938.02359"	"1938.02291"	"0.35"	"0.00023"	"14/124"	"14"	"124"	"1146080.06549072"	"HCD"	"MS2"	"34.65848"	"63.0"	"100.000"	"54.3643"	"16601"	"16601"	"16577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.0"	""	"88.8"	""	"87.4"	""	"86.4"	"0.4"	"126.4"	"128.0"	""	"1255"	"37"	"37.000"	"30.000"	"0.011765590538123"	"26"	"0"	"0.0001092"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQELLMAHDFTK"	"[K].mQELLMAHDFTk.[F]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"646.68079"	"1938.02781"	"1938.02291"	"2.53"	"0.00163"	"9/124"	"9"	"124"	"1784764.75634766"	"HCD"	"MS2"	"0"	"84.7"	"100.000"	"54.5683"	"16738"	"16738"	"16709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.8"	""	"121.8"	""	"123.9"	""	"106.4"	""	"155.0"	"183.3"	""	"1257"	"22"	"37.000"	"30.000"	"0.418124178672795"	"16"	"0.0001889"	"0.0005234"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLMDLNEPYPk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"969.54205"	"1938.07683"	"1938.08108"	"-2.19"	"-0.00212"	"8/104"	"8"	"104"	"617490.448059082"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"75.6642"	"25339"	"25339"	"25311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.3"	""	"81.6"	""	"65.7"	""	"45.0"	"0.5"	"67.4"	"73.1"	""	"1142"	"42"	"37.000"	"30.000"	"0.00348847896221082"	"25"	"0"	"0.0001565"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLMDLNEPYPk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.5588"	"0.0000"	"1"	"1"	"1"	"646.69824"	"1938.08017"	"1938.08108"	"-0.47"	"-0.00030"	"8/104"	"8"	"104"	"3857759.58959961"	"HCD"	"MS2"	"0"	"91.5"	"100.000"	"75.6410"	"25329"	"25329"	"25311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.2"	""	"183.9"	""	"165.0"	""	"103.8"	""	"146.8"	"149.8"	""	"1133"	"34"	"37.000"	"30.000"	"0.0226047607188154"	"30"	"7.476E-05"	"0.0001861"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLMDLNEPYPk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"646.69873"	"1938.08164"	"1938.08108"	"0.29"	"0.00019"	"8/104"	"8"	"104"	"2170910.83746338"	"HCD"	"MS2"	"5.284016"	"51.0"	"100.000"	"75.9507"	"25456"	"25456"	"25439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.8"	""	"83.3"	""	"84.5"	""	"62.4"	"0.1"	"87.4"	"96.9"	""	"1109"	"45"	"37.000"	"30.000"	"0.00190064737640007"	"28"	"0.0001308"	"0.0002504"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLMDLNEPYPk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"969.54456"	"1938.08183"	"1938.08108"	"0.39"	"0.00038"	"8/104"	"8"	"104"	"289346.424499512"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"75.9814"	"25416"	"25416"	"25393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.2"	""	"37.9"	""	"38.8"	""	"22.4"	""	"43.8"	"38.2"	""	"1108"	"39"	"37.000"	"30.000"	"0.00718637316125113"	"22"	"0"	"0.000148"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLMDLNEPYPk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"646.69891"	"1938.08219"	"1938.08108"	"0.57"	"0.00037"	"8/104"	"8"	"104"	"3529309.80181885"	"HCD"	"MS2"	"4.057722"	"85.9"	"100.000"	"75.9259"	"25394"	"25394"	"25377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.4"	""	"152.3"	""	"148.7"	""	"85.4"	"2.2"	"150.1"	"162.0"	""	"1108"	"48"	"37.000"	"30.000"	"0.000825106037051848"	"30"	"0"	"8.172E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLMDLNEPYPk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"969.54474"	"1938.08220"	"1938.08108"	"0.58"	"0.00056"	"8/104"	"8"	"104"	"178146.683959961"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"75.9763"	"25462"	"25462"	"25439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.4"	""	"20.0"	""	"22.8"	""	"20.3"	""	"22.8"	"23.7"	""	"1108"	"46"	"37.000"	"30.000"	"0.0014774397001449"	"28"	"0"	"7.651E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLMDLNEPYPk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"646.69922"	"1938.08310"	"1938.08108"	"1.04"	"0.00068"	"9/104"	"9"	"104"	"2673253.34716797"	"HCD"	"MS2"	"0"	"67.8"	"100.000"	"75.6441"	"25279"	"25279"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.9"	""	"135.2"	""	"123.2"	""	"71.9"	""	"114.4"	"109.7"	""	"1078"	"36"	"37.000"	"30.000"	"0.0143743682017708"	"28"	"0.0001308"	"0.0002172"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLMDLNEPYPk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"969.54541"	"1938.08354"	"1938.08108"	"1.27"	"0.00123"	"8/104"	"8"	"104"	"542842.659606934"	"HCD"	"MS2"	"0"	"38.8"	"100.000"	"75.6765"	"25292"	"25292"	"25265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.4"	""	"72.2"	""	"73.5"	""	"48.2"	""	"68.1"	"56.8"	""	"1098"	"40"	"37.000"	"30.000"	"0.00557920532386012"	"22"	"0.0001308"	"0.0002276"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGmANLLTGPk.[R]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.9892"	"0.0000"	"1"	"1"	"1"	"969.55933"	"1938.11138"	"1938.11344"	"-1.07"	"-0.00103"	"13/132"	"13"	"132"	"696525.606933594"	"HCD"	"MS2"	"0"	"47.8"	"100.000"	"52.6115"	"15956"	"15956"	"15926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.3"	""	"61.6"	""	"71.8"	""	"125.6"	"1.4"	"68.4"	"69.1"	""	"964"	"93"	"36.000"	"29.000"	"2.58253988921431E-08"	"20"	"0"	"2.402E-05"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGmANLLTGPk.[R]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"969.55975"	"1938.11223"	"1938.11344"	"-0.62"	"-0.00061"	"12/132"	"12"	"132"	"828300.922546387"	"HCD"	"MS2"	"0"	"56.0"	"100.000"	"52.4087"	"15823"	"15823"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.1"	""	"67.6"	""	"88.9"	""	"151.4"	"1.3"	"84.7"	"81.8"	""	"943"	"63"	"36.000"	"29.000"	"2.19523843096075E-05"	"16"	"0"	"9.642E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGmANLLTGPk.[R]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"646.70905"	"1938.11258"	"1938.11344"	"-0.44"	"-0.00029"	"10/132"	"10"	"132"	"1967810.97064209"	"HCD"	"MS2"	"25.23149"	"110.5"	"100.000"	"52.8786"	"16065"	"16065"	"16038"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"129.3"	""	"147.2"	""	"153.1"	""	"193.1"	""	"216.9"	"209.1"	""	"943"	"31"	"36.000"	"29.000"	"0.0350333523518295"	"15"	"0"	"9.577E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGmANLLTGPk.[R]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.70911"	"1938.11277"	"1938.11344"	"-0.35"	"-0.00022"	"14/132"	"14"	"132"	"3278212.33032227"	"HCD"	"MS2"	"13.24171"	"116.4"	"100.000"	"52.5929"	"15898"	"15898"	"15874"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.1"	""	"151.9"	""	"161.4"	""	"248.3"	"0.2"	"201.2"	"200.2"	""	"954"	"48"	"36.000"	"29.000"	"0.000793447834226571"	"15"	"0"	"4.34E-06"	"1.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGmANLLTGPk.[R]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.70984"	"1938.11496"	"1938.11344"	"0.79"	"0.00051"	"14/132"	"14"	"132"	"7009239.47467041"	"HCD"	"MS2"	"18.56595"	"183.5"	"100.000"	"52.5197"	"15918"	"15918"	"15894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.4"	""	"238.4"	""	"277.5"	""	"400.2"	"5.2"	"300.9"	"306.1"	""	"911"	"57"	"36.000"	"29.000"	"8.48180690749937E-05"	"16"	"0"	"5.667E-06"	"1.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTYGMANLLTGPK"	"[K].vVTYGmANLLTGPk.[R]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.9808"	"0.0000"	"1"	"1"	"1"	"646.71045"	"1938.11679"	"1938.11344"	"1.73"	"0.00112"	"11/132"	"11"	"132"	"5339210.76690674"	"HCD"	"MS2"	"33.8347"	"151.5"	"100.000"	"52.2892"	"15774"	"15774"	"15746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.0"	""	"196.3"	""	"240.0"	""	"315.0"	"7.3"	"241.2"	"252.5"	""	"891"	"52"	"36.000"	"29.000"	"0.000255768883913365"	"17"	"0"	"4.822E-06"	"1.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPNIEMSDLSFSK"	"[K].iPNIEMSDLSFSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07151"	"Beta-2-microglobulin OS=Rattus norvegicus OX=10116 GN=B2m PE=1 SV=1"	"P07151"	"Beta-2-microglobulin OS=Rattus norvegicus OX=10116 GN=B2m PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"970.03271"	"1939.05815"	"1939.06107"	"-1.50"	"-0.00146"	"7/130"	"7"	"130"	"239617.204650879"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"70.1171"	"23023"	"23023"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.3"	""	"17.2"	""	"21.3"	""	"26.4"	""	"37.9"	"37.9"	""	"1182"	"17"	"37.000"	"30.000"	"1.28999337789922"	"14"	"0.0009404"	"0.009839"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPNIEMSDLSFSK"	"[K].iPNIEMSDLSFSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07151"	"Beta-2-microglobulin OS=Rattus norvegicus OX=10116 GN=B2m PE=1 SV=1"	"P07151"	"Beta-2-microglobulin OS=Rattus norvegicus OX=10116 GN=B2m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.02515"	"1939.06089"	"1939.06107"	"-0.10"	"-0.00006"	"13/130"	"13"	"130"	"1626682.16229248"	"HCD"	"MS2"	"10.78351"	"58.8"	"100.000"	"70.0344"	"22989"	"22989"	"22966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.4"	""	"64.8"	""	"81.0"	""	"87.1"	""	"127.4"	"132.0"	""	"1157"	"31"	"37.000"	"30.000"	"0.0475667372994381"	"14"	"0"	"3.154E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVYPFGIVGMANK"	"[K].gEVYPFGIVGMANk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.35962"	"1940.06430"	"1940.07158"	"-3.75"	"-0.00242"	"10/106"	"10"	"106"	"1220809.03131104"	"HCD"	"MS2"	"8.195661"	"44.6"	"100.000"	"65.2127"	"21029"	"21029"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.3"	""	"57.8"	""	"56.8"	""	"74.0"	""	"84.5"	"87.4"	""	"1166"	"24"	"37.000"	"30.000"	"0.23316778911072"	"14"	"0"	"0.0001206"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPLGNVGLLIGEASK"	"[K].nPLGNVGLLIGEASk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.9907"	"0.0000"	"1"	"1"	"1"	"970.58124"	"1940.15520"	"1940.15808"	"-1.49"	"-0.00144"	"13/144"	"13"	"144"	"506643.876098633"	"HCD"	"MS2"	"29.73651"	"32.5"	"100.000"	"72.6341"	"24102"	"24102"	"24079"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.3"	""	"42.3"	""	"42.3"	""	"49.8"	""	"59.4"	"62.9"	""	"562"	"108"	"34.000"	"27.000"	"4.12768284017926E-10"	"20"	"0"	"1.403E-07"	"1.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPLGNVGLLIGEASK"	"[K].nPLGNVGLLIGEASk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.39038"	"1940.15659"	"1940.15808"	"-0.77"	"-0.00050"	"14/144"	"14"	"144"	"3802613.22729492"	"HCD"	"MS2"	"16.17364"	"96.4"	"100.000"	"72.5781"	"24028"	"24028"	"24001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.0"	""	"123.1"	""	"132.2"	""	"163.1"	""	"176.6"	"176.3"	""	"556"	"58"	"34.000"	"27.000"	"4.41615996110182E-05"	"16"	"0"	"3.165E-06"	"1.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MKEIAEAYLGK"	"[K].mkEIAEAYLGk.[T]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"647.39044"	"1940.15677"	"1940.14938"	"3.81"	"0.00246"	"12/104"	"12"	"104"	"7947010.84576416"	"HCD"	"MS2"	"24.92939"	"405.5"	"100.000"	"56.5420"	"17545"	"17545"	"17525"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"913.2"	""	"796.0"	""	"806.1"	""	"370.8"	""	"428.1"	"501.7"	""	"556"	"15"	"34.000"	"27.000"	"0.933350567595412"	"18"	"0"	"0.0001214"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPLGNVGLLIGEASK"	"[K].nPLGNVGLLIGEASk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.39050"	"1940.15696"	"1940.15808"	"-0.58"	"-0.00038"	"15/144"	"15"	"144"	"1031341.64074707"	"HCD"	"MS2"	"10.61275"	"35.7"	"100.000"	"72.8666"	"24197"	"24197"	"24175"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.9"	""	"41.6"	""	"44.6"	""	"70.3"	"2.2"	"62.9"	"72.4"	""	"555"	"41"	"34.000"	"27.000"	"0.00216901715773262"	"15"	"0"	"1.293E-05"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPLGNVGLLIGEASK"	"[K].nPLGNVGLLIGEASk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.39069"	"1940.15750"	"1940.15808"	"-0.30"	"-0.00019"	"12/144"	"12"	"144"	"1262182.10406494"	"HCD"	"MS2"	"13.00638"	"38.8"	"100.000"	"72.8757"	"24149"	"24149"	"24129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.8"	""	"48.5"	""	"56.1"	""	"68.9"	""	"71.0"	"69.7"	""	"556"	"40"	"34.000"	"27.000"	"0.00248338924477856"	"15"	"0"	"5.624E-06"	"1.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPLGNVGLLIGEASK"	"[K].nPLGNVGLLIGEASk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.39075"	"1940.15769"	"1940.15808"	"-0.20"	"-0.00013"	"14/144"	"14"	"144"	"4193469.90405273"	"HCD"	"MS2"	"9.962755"	"105.6"	"100.000"	"72.5212"	"24056"	"24056"	"24031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.2"	""	"131.1"	""	"149.8"	""	"182.0"	"0.5"	"180.3"	"195.0"	""	"556"	"61"	"34.000"	"27.000"	"2.42686040411895E-05"	"16"	"0"	"3.245E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MKEIAEAYLGK"	"[K].mkEIAEAYLGk.[T]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.39087"	"1940.15805"	"1940.14938"	"4.47"	"0.00289"	"11/104"	"11"	"104"	"8359420.45385742"	"HCD"	"MS2"	"15.41597"	"436.1"	"100.000"	"56.3803"	"17425"	"17425"	"17403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1002.2"	""	"846.7"	""	"863.2"	""	"403.5"	""	"453.5"	"539.0"	""	"555"	"15"	"34.000"	"27.000"	"0.796641611511851"	"13"	"0"	"0.0001306"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPLGNVGLLIGEASK"	"[K].nPLGNVGLLIGEASk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.9865"	"0.0000"	"1"	"1"	"1"	"970.58325"	"1940.15923"	"1940.15808"	"0.59"	"0.00057"	"18/144"	"18"	"144"	"432077.530761719"	"HCD"	"MS2"	"0"	"33.9"	"100.000"	"72.6451"	"24055"	"24055"	"24033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.9"	""	"47.6"	""	"42.1"	""	"56.4"	""	"63.3"	"63.9"	""	"556"	"74"	"34.000"	"27.000"	"1.07162983431084E-06"	"19"	"0"	"3.3E-06"	"1.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGTLLSGSWDTTAK"	"[K].fGTLLSGSWDTTAk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"648.02716"	"1942.06693"	"1942.06860"	"-0.86"	"-0.00056"	"15/122"	"15"	"122"	"947438.055969238"	"HCD"	"MS2"	"3.968192"	"44.0"	"100.000"	"68.5897"	"22451"	"22451"	"22426"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.6"	""	"65.8"	""	"61.7"	""	"70.8"	"0.7"	"74.2"	"88.0"	""	"1096"	"56"	"37.000"	"30.000"	"0.000150584599590011"	"24"	"0"	"5.909E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGTLLSGSWDTTAK"	"[K].fGTLLSGSWDTTAk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"3"	"3"	"0.9219"	"0.0000"	"1"	"1"	"1"	"648.02808"	"1942.06968"	"1942.06860"	"0.55"	"0.00036"	"14/122"	"14"	"122"	"1373977.65106201"	"HCD"	"MS2"	"27.46276"	"52.9"	"100.000"	"68.7087"	"22448"	"22448"	"22426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.1"	""	"64.4"	""	"68.8"	""	"91.4"	""	"114.0"	"102.8"	""	"1101"	"64"	"37.000"	"30.000"	"2.1615103693748E-05"	"21"	"0"	"2.251E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPLIQFNLLHSK"	"[R].sSPLIQFNLLHSk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.05566"	"1942.15244"	"1942.15260"	"-0.08"	"-0.00005"	"11/132"	"11"	"132"	"4293042.21075439"	"HCD"	"MS2"	"17.29892"	"158.8"	"100.000"	"55.6667"	"17188"	"17188"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.9"	""	"182.7"	""	"216.0"	""	"260.8"	"7.0"	"310.6"	"332.7"	""	"594"	"52"	"34.000"	"27.000"	"0.000177728243732915"	"16"	"0"	"1.739E-06"	"1.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALVLEALPQIAAK"	"[K].mALVLEALPQIAAk.[I]"	"N-Term(TMT6plex); M1(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"648.06378"	"1942.17679"	"1942.18113"	"-2.23"	"-0.00144"	"13/112"	"13"	"112"	"554264.58013916"	"HCD"	"MS2"	"55.56504"	"24.3"	"100.000"	"71.9214"	"23760"	"23760"	"23731"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.3"	""	"27.3"	""	"26.6"	""	"55.8"	""	"47.5"	"48.6"	""	"407"	"38"	"33.000"	"26.000"	"0.0028877820566373"	"16"	"0"	"4.786E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALVLEALPQIAAK"	"[K].mALVLEALPQIAAk.[I]"	"N-Term(TMT6plex); M1(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"648.06482"	"1942.17990"	"1942.18113"	"-0.63"	"-0.00041"	"13/112"	"13"	"112"	"615287.365905762"	"HCD"	"MS2"	"57.73797"	"25.9"	"100.000"	"71.8025"	"23763"	"23763"	"23738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.6"	""	"27.1"	""	"35.1"	""	"54.9"	""	"52.2"	"55.3"	""	"395"	"35"	"32.000"	"25.000"	"0.00646497872385705"	"17"	"0"	"0.0001821"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPFILPHQQVDK"	"[K].yPFILPHQQVDk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4G009"	"Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus OX=10116 GN=Mcts1 PE=2 SV=1"	"Q4G009"	"Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus OX=10116 GN=Mcts1 PE=2 SV=1"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"648.37720"	"1943.11704"	"1943.11549"	"0.80"	"0.00052"	"11/96"	"11"	"96"	"2915734.21282959"	"HCD"	"MS2"	"4.66066"	"141.6"	"100.000"	"47.4499"	"13852"	"13852"	"13826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.9"	""	"178.9"	""	"203.9"	""	"221.1"	"0.8"	"274.0"	"250.4"	""	"874"	"37"	"36.000"	"29.000"	"0.00780695070210347"	"18"	"0"	"1.861E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGPTSLFAVTVAPPGAR"	"[K].sSGPTSLFAVTVAPPGAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"972.53943"	"1944.07158"	"1944.07519"	"-1.86"	"-0.00181"	"7/156"	"7"	"156"	"131117.350036621"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"57.8102"	"18010"	"18010"	"17979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.4"	""	"11.2"	""	"13.9"	""	"12.5"	""	"16.4"	"13.7"	""	"1184"	"10"	"37.000"	"30.000"	"6.17051918200835"	"13"	"0.00103"	"0.01185"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGPTSLFAVTVAPPGAR"	"[K].sSGPTSLFAVTVAPPGAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.9683"	"0.0000"	"1"	"1"	"1"	"972.54132"	"1944.07536"	"1944.07519"	"0.09"	"0.00009"	"14/156"	"14"	"156"	"954080.231750488"	"HCD"	"MS2"	"0"	"44.3"	"100.000"	"57.4835"	"17876"	"17876"	"17851"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.0"	""	"81.2"	""	"66.4"	""	"87.9"	""	"65.0"	"54.4"	""	"1157"	"63"	"37.000"	"30.000"	"3.10672894200191E-05"	"18"	"0"	"3.64E-07"	"1.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGPTSLFAVTVAPPGAR"	"[K].sSGPTSLFAVTVAPPGAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.9855"	"0.0000"	"1"	"1"	"1"	"972.54132"	"1944.07536"	"1944.07519"	"0.09"	"0.00009"	"12/156"	"12"	"156"	"1013574.38421631"	"HCD"	"MS2"	"0"	"48.0"	"100.000"	"57.6594"	"18002"	"18002"	"17973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.3"	""	"77.3"	""	"73.5"	""	"104.5"	"0.4"	"56.2"	"55.2"	""	"1157"	"69"	"37.000"	"30.000"	"7.57361742455158E-06"	"18"	"0"	"8.317E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGPTSLFAVTVAPPGAR"	"[K].sSGPTSLFAVTVAPPGAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"648.69684"	"1944.07596"	"1944.07519"	"0.40"	"0.00026"	"15/156"	"15"	"156"	"3546688.82531738"	"HCD"	"MS2"	"23.89446"	"108.5"	"100.000"	"57.9219"	"18109"	"18109"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.6"	""	"147.6"	""	"149.5"	""	"197.1"	"2.9"	"189.0"	"204.2"	""	"1154"	"24"	"37.000"	"30.000"	"0.251290351116573"	"16"	"0"	"8.421E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGPTSLFAVTVAPPGAR"	"[K].sSGPTSLFAVTVAPPGAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"648.69684"	"1944.07596"	"1944.07519"	"0.40"	"0.00026"	"16/156"	"16"	"156"	"6100705.87036133"	"HCD"	"MS2"	"3.404993"	"69.4"	"100.000"	"57.4723"	"17871"	"17871"	"17851"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.2"	"3.5"	"84.5"	""	"93.8"	""	"117.7"	""	"130.4"	"131.4"	""	"1154"	"38"	"37.000"	"30.000"	"0.00984409538454803"	"22"	"0"	"3.804E-06"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGFNK"	"[K].sFNTVPYIVGFNk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"972.55029"	"1944.09331"	"1944.09951"	"-3.19"	"-0.00310"	"9/122"	"9"	"122"	"152391.996948242"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"67.9368"	"22185"	"22185"	"22154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.9"	""	"16.7"	""	"15.5"	""	"15.6"	""	"17.8"	"15.2"	""	"1040"	"17"	"37.000"	"30.000"	"1.09648663796531"	"14"	"0.001217"	"0.01832"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGFNK"	"[K].sFNTVPYIVGFNk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.70404"	"1944.09757"	"1944.09951"	"-1.00"	"-0.00065"	"12/122"	"12"	"122"	"4556103.09710693"	"HCD"	"MS2"	"3.386655"	"115.0"	"100.000"	"67.8677"	"22156"	"22156"	"22138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.0"	""	"177.1"	""	"185.4"	""	"148.9"	"5.6"	"185.5"	"186.5"	""	"1026"	"10"	"37.000"	"30.000"	"5.61199615897584"	"13"	"0.0001889"	"0.0003985"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGFNK"	"[K].sFNTVPYIVGFNk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.70428"	"1944.09830"	"1944.09951"	"-0.62"	"-0.00040"	"12/122"	"12"	"122"	"10008308.7636108"	"HCD"	"MS2"	"1.789266"	"253.2"	"100.000"	"67.5598"	"22030"	"22030"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"476.4"	""	"440.0"	""	"406.1"	""	"318.8"	"5.0"	"383.7"	"359.1"	""	"1030"	"20"	"37.000"	"30.000"	"0.517377131993374"	"14"	"7.476E-05"	"0.0001882"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGFNK"	"[K].sFNTVPYIVGFNk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"972.55304"	"1944.09880"	"1944.09951"	"-0.36"	"-0.00035"	"15/122"	"15"	"122"	"1355157.47772217"	"HCD"	"MS2"	"0"	"91.8"	"100.000"	"67.5711"	"22035"	"22035"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"190.4"	""	"182.9"	""	"145.7"	""	"86.2"	""	"141.2"	"123.3"	""	"1000"	"41"	"36.000"	"30.000"	"0.00358897145635681"	"15"	"0"	"7.343E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGFNK"	"[K].sFNTVPYIVGFNk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"972.55328"	"1944.09929"	"1944.09951"	"-0.11"	"-0.00011"	"14/122"	"14"	"122"	"1496785.78283691"	"HCD"	"MS2"	"0"	"105.2"	"100.000"	"67.7649"	"22063"	"22063"	"22042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.4"	""	"224.0"	""	"160.9"	""	"98.5"	""	"161.7"	"141.5"	""	"1003"	"29"	"37.000"	"30.000"	"0.0689082050468777"	"14"	"0"	"0.0001284"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGFNK"	"[K].sFNTVPYIVGFNk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.70490"	"1944.10013"	"1944.09951"	"0.32"	"0.00021"	"14/122"	"14"	"122"	"4447098.66973877"	"HCD"	"MS2"	"0"	"118.7"	"100.000"	"67.6281"	"22008"	"22008"	"21985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"241.3"	""	"216.0"	""	"186.4"	""	"137.3"	"4.1"	"178.7"	"155.9"	""	"983"	"40"	"36.000"	"29.000"	"0.00458694488841722"	"15"	"0"	"4.705E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEGVTALPYFLFK"	"[R].tEGVTALPYFLFk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"972.56476"	"1944.12224"	"1944.12466"	"-1.24"	"-0.00121"	"8/104"	"8"	"104"	"133056.48260498"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"83.3825"	"28425"	"28425"	"28398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.6"	""	"19.8"	""	"16.3"	""	"16.0"	""	"13.5"	"21.2"	""	"813"	"37"	"36.000"	"29.000"	"0.00765703354877603"	"15"	"0.0001859"	"0.0003388"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEGVTALPYFLFK"	"[R].tEGVTALPYFLFk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"972.56555"	"1944.12383"	"1944.12466"	"-0.43"	"-0.00042"	"12/104"	"12"	"104"	"151304.571655273"	"HCD"	"MS2"	"32.32536"	"11.9"	"100.000"	"83.3772"	"28474"	"28474"	"28445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.5"	""	"18.5"	""	"17.6"	""	"14.7"	""	"20.1"	"25.3"	""	"813"	"37"	"36.000"	"29.000"	"0.00803638158705471"	"17"	"0.0001308"	"0.0002325"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEGVTALPYFLFK"	"[R].tEGVTALPYFLFk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.71429"	"1944.12833"	"1944.12466"	"1.89"	"0.00122"	"13/104"	"13"	"104"	"796535.657592773"	"HCD"	"MS2"	"25.98118"	"23.0"	"100.000"	"83.4697"	"28511"	"28511"	"28491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.2"	""	"29.4"	""	"31.8"	""	"35.7"	""	"36.6"	"44.4"	""	"754"	"38"	"35.000"	"28.000"	"0.00537454062788025"	"15"	"0.0001308"	"0.0002494"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEGVTALPYFLFK"	"[R].tEGVTALPYFLFk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"Q641Y5"	"Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus OX=10116 GN=Atg7 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.71533"	"1944.13144"	"1944.12466"	"3.49"	"0.00226"	"12/104"	"12"	"104"	"726393.420654297"	"HCD"	"MS2"	"26.97053"	"23.7"	"100.000"	"83.4470"	"28451"	"28451"	"28430"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.6"	""	"31.9"	""	"33.2"	""	"34.9"	""	"41.4"	"49.1"	""	"700"	"24"	"35.000"	"28.000"	"0.135852628096727"	"14"	"0.0001308"	"0.0002853"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKDLSTIEPLK"	"[K].ikDLSTIEPLk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.74921"	"1944.23307"	"1944.23483"	"-0.90"	"-0.00059"	"14/108"	"14"	"108"	"9423996.75665283"	"HCD"	"MS2"	"10.21297"	"455.0"	"100.000"	"51.0600"	"15321"	"15321"	"15302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"828.8"	""	"735.8"	""	"719.1"	""	"744.3"	""	"622.3"	"644.0"	""	"193"	"20"	"29.000"	"22.000"	"0.0945207835919395"	"14"	"0"	"3.349E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKDLSTIEPLK"	"[K].ikDLSTIEPLk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.74933"	"1944.23343"	"1944.23483"	"-0.72"	"-0.00046"	"13/108"	"13"	"108"	"6195181.82427979"	"HCD"	"MS2"	"15.90476"	"308.7"	"100.000"	"50.7886"	"15160"	"15160"	"15138"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"554.9"	""	"503.6"	""	"488.4"	""	"521.0"	""	"426.9"	"418.8"	""	"192"	"19"	"29.000"	"22.000"	"0.13405136266137"	"14"	"0"	"4.89E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKDLSTIEPLK"	"[K].ikDLSTIEPLk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"P49911"	"Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Rattus norvegicus OX=10116 GN=Anp32a PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.74988"	"1944.23508"	"1944.23483"	"0.13"	"0.00009"	"8/108"	"8"	"108"	"2214361.76171875"	"HCD"	"MS2"	"13.20083"	"135.2"	"100.000"	"51.1499"	"15308"	"15308"	"15282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.9"	""	"195.5"	""	"208.4"	""	"213.3"	"1.3"	"239.1"	"230.1"	""	"190"	"8"	"29.000"	"22.000"	"1.46799171756149"	"13"	"0.0001308"	"0.0002375"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFAFVTFESPADAK"	"[R].gFAFVTFESPADAk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"973.02954"	"1945.05181"	"1945.04714"	"2.40"	"0.00234"	"10/116"	"10"	"116"	"144960.506164551"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"66.8633"	"21703"	"21703"	"21673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"13.1"	""	"11.0"	""	"28.2"	""	"20.7"	"28.7"	""	"1244"	"19"	"37.000"	"30.000"	"0.825639352707898"	"19"	"0.000494"	"0.002687"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGFNK"	"[K].sFnTVPYIVGFNk.[Q]"	"N-Term(TMT6plex); N3(Deamidated); K13(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.03113"	"1945.07883"	"1945.08352"	"-2.41"	"-0.00156"	"11/122"	"11"	"122"	"813255.783813477"	"HCD"	"MS2"	"20.64324"	"35.4"	"100.000"	"69.1168"	"22615"	"22615"	"22586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.6"	""	"49.6"	""	"55.6"	""	"53.9"	""	"70.5"	"59.3"	""	"1197"	"10"	"37.000"	"30.000"	"5.66322941077426"	"13"	"0.0001859"	"0.0003648"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEATIIDIITQR"	"[K].gIGTDEATIIDIITQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9672"	"0.0000"	"1"	"1"	"1"	"649.03143"	"1945.07975"	"1945.08034"	"-0.30"	"-0.00020"	"16/142"	"16"	"142"	"2029894.34283447"	"HCD"	"MS2"	"37.77913"	"31.4"	"100.000"	"81.9059"	"27873"	"27873"	"27854"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.5"	""	"48.4"	""	"51.2"	""	"45.2"	""	"58.2"	"52.2"	""	"1201"	"61"	"37.000"	"30.000"	"4.6292753317319E-05"	"18"	"0"	"6.877E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEATIIDIITQR"	"[K].gIGTDEATIIDIITQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"973.04370"	"1945.08013"	"1945.08034"	"-0.11"	"-0.00011"	"7/142"	"7"	"142"	"246661.768554688"	"HCD"	"MS2"	"11.45758"	"16.5"	"100.000"	"81.8806"	"27863"	"27863"	"27838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.8"	""	"25.9"	""	"24.5"	""	"23.7"	""	"29.5"	"31.9"	""	"1197"	"26"	"37.000"	"30.000"	"0.152077216427126"	"14"	"0.0001889"	"0.0009236"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEATIIDIITQR"	"[K].gIGTDEATIIDIITQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"973.04376"	"1945.08025"	"1945.08034"	"-0.05"	"-0.00004"	"11/142"	"11"	"142"	"328538.60333252"	"HCD"	"MS2"	"45.10088"	"25.3"	"100.000"	"81.8578"	"27803"	"27803"	"27776"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.3"	""	"40.7"	""	"37.4"	""	"35.3"	""	"42.6"	"44.5"	""	"1199"	"14"	"37.000"	"30.000"	"2.59889771593324"	"13"	"0.0005564"	"0.003643"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFIADFK"	"[R].aLYQAEAFIADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"973.04388"	"1945.08049"	"1945.08352"	"-1.56"	"-0.00151"	"10/124"	"10"	"124"	"176178.953613281"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"87.2391"	"30038"	"30038"	"30018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.6"	""	"14.2"	""	"20.1"	""	"25.8"	""	"20.0"	"28.8"	""	"1199"	"34"	"37.000"	"30.000"	"0.0261691241427979"	"15"	"7.476E-05"	"0.0001846"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFIADFK"	"[R].aLYQAEAFIADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.03235"	"1945.08249"	"1945.08352"	"-0.53"	"-0.00034"	"13/124"	"13"	"124"	"978146.134277344"	"HCD"	"MS2"	"0"	"30.6"	"100.000"	"87.5000"	"30143"	"30143"	"30139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.8"	""	"39.9"	""	"46.4"	""	"54.3"	"1.7"	"55.7"	"58.4"	""	"1192"	"43"	"37.000"	"30.000"	"0.00286580251676038"	"15"	"0"	"2.978E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFIADFK"	"[R].aLYQAEAFIADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"649.03235"	"1945.08249"	"1945.08352"	"-0.53"	"-0.00034"	"14/124"	"14"	"124"	"1862955.05749512"	"HCD"	"MS2"	"6.069099"	"52.7"	"100.000"	"87.0975"	"29929"	"29929"	"29916"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.4"	""	"68.9"	""	"82.4"	""	"91.4"	"0.5"	"103.1"	"103.2"	""	"1192"	"47"	"37.000"	"30.000"	"0.00125674237736024"	"16"	"0"	"1.779E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFIADFK"	"[R].aLYQAEAFIADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"973.04510"	"1945.08293"	"1945.08352"	"-0.30"	"-0.00029"	"14/124"	"14"	"124"	"305724.932800293"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"87.5044"	"30144"	"30144"	"30139"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.5"	""	"34.3"	""	"41.6"	""	"42.1"	"1.3"	"45.0"	"41.0"	""	"1168"	"51"	"37.000"	"30.000"	"0.000418227751564334"	"16"	"0"	"1.708E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFIADFK"	"[R].aLYQAEAFIADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.03253"	"1945.08304"	"1945.08352"	"-0.25"	"-0.00016"	"8/124"	"8"	"124"	"2054042.68145752"	"HCD"	"MS2"	"3.260759"	"53.1"	"100.000"	"87.2232"	"30032"	"30032"	"30018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.4"	""	"67.4"	""	"87.2"	""	"92.0"	"0.8"	"89.0"	"102.5"	""	"1168"	"52"	"37.000"	"30.000"	"0.000388519523221817"	"16"	"0"	"3.078E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFNTVPYIVGFNK"	"[K].sFnTVPYIVGFNk.[Q]"	"N-Term(TMT6plex); N3(Deamidated); K13(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.03253"	"1945.08304"	"1945.08352"	"-0.25"	"-0.00016"	"11/122"	"11"	"122"	"965160.499267578"	"HCD"	"MS2"	"47.71221"	"39.6"	"100.000"	"68.9125"	"22583"	"22583"	"22554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.4"	""	"54.8"	""	"57.3"	""	"62.3"	""	"73.1"	"71.1"	""	"1168"	"22"	"37.000"	"30.000"	"0.329164391002357"	"14"	"0.0001889"	"0.0004047"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFIADFK"	"[R].aLYQAEAFIADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.9800"	"0.0000"	"1"	"1"	"1"	"649.03259"	"1945.08323"	"1945.08352"	"-0.15"	"-0.00010"	"15/124"	"15"	"124"	"1426289.99304199"	"HCD"	"MS2"	"3.800011"	"42.6"	"100.000"	"87.3742"	"30042"	"30042"	"30029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.4"	""	"58.6"	""	"65.2"	""	"74.6"	"0.4"	"72.9"	"85.4"	""	"1169"	"50"	"37.000"	"30.000"	"0.000534299189639362"	"17"	"0"	"1.379E-05"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFIADFK"	"[R].aLYQAEAFIADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"649.03278"	"1945.08377"	"1945.08352"	"0.13"	"0.00008"	"11/124"	"11"	"124"	"222768.564086914"	"HCD"	"MS2"	"14.40248"	"9.4"	"100.000"	"87.6487"	"30145"	"30145"	"30139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.7"	""	"10.3"	""	"11.2"	""	"16.8"	""	"19.7"	"22.8"	""	"1161"	"36"	"37.000"	"30.000"	"0.0130557619868767"	"19"	"0"	"2.295E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFIADFK"	"[R].aLYQAEAFIADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"973.04559"	"1945.08391"	"1945.08352"	"0.20"	"0.00019"	"8/124"	"8"	"124"	"162533.56817627"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"87.1159"	"29937"	"29937"	"29916"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.5"	""	"18.5"	""	"19.8"	""	"25.3"	""	"26.0"	"24.8"	""	"1160"	"16"	"37.000"	"30.000"	"1.58280711402866"	"22"	"0.000523"	"0.002787"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYQAEAFIADFK"	"[R].aLYQAEAFIADFk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"973.04590"	"1945.08452"	"1945.08352"	"0.51"	"0.00050"	"8/124"	"8"	"124"	"334569.239501953"	"HCD"	"MS2"	"0"	"28.5"	"100.000"	"87.4182"	"30059"	"30059"	"30041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.5"	""	"35.2"	""	"46.0"	""	"49.9"	""	"58.1"	"55.5"	""	"1148"	"39"	"37.000"	"30.000"	"0.00698090764371016"	"15"	"0"	"6.149E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTVVQTFQELVEPR"	"[R].gLTVVQTFQELVEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"0.9877"	"0.0000"	"1"	"1"	"1"	"649.03595"	"1945.09330"	"1945.09559"	"-1.18"	"-0.00077"	"16/150"	"16"	"150"	"2233408.46044922"	"HCD"	"MS2"	"6.399868"	"16.4"	"100.000"	"82.6468"	"28175"	"28175"	"28157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.6"	""	"22.6"	""	"25.6"	""	"27.6"	""	"31.0"	"32.8"	""	"1082"	"81"	"37.000"	"30.000"	"4.47916710568373E-07"	"19"	"0"	"2.55E-06"	"1.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTVVQTFQELVEPR"	"[R].gLTVVQTFQELVEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"649.03613"	"1945.09385"	"1945.09559"	"-0.90"	"-0.00058"	"16/150"	"16"	"150"	"1769999.62408447"	"HCD"	"MS2"	"14.30316"	"18.4"	"100.000"	"82.4327"	"28037"	"28037"	"28016"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.7"	""	"22.5"	""	"34.1"	""	"32.3"	""	"34.2"	"32.0"	""	"1081"	"87"	"37.000"	"30.000"	"1.20169899589708E-07"	"21"	"0"	"1.292E-06"	"1.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTVVQTFQELVEPR"	"[R].gLTVVQTFQELVEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"973.05060"	"1945.09392"	"1945.09559"	"-0.86"	"-0.00084"	"11/150"	"11"	"150"	"203686.261352539"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"82.7028"	"28147"	"28147"	"28128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.4"	""	"9.9"	""	"16.7"	""	"18.9"	""	"19.9"	"22.6"	""	"1081"	"21"	"37.000"	"30.000"	"0.417633856244227"	"14"	"0.0001889"	"0.0008195"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTVVQTFQELVEPR"	"[R].gLTVVQTFQELVEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.03619"	"1945.09403"	"1945.09559"	"-0.80"	"-0.00052"	"15/150"	"15"	"150"	"1021352.4543457"	"HCD"	"MS2"	"32.2662"	"15.0"	"100.000"	"82.3583"	"28058"	"28058"	"28030"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.4"	""	"21.0"	""	"20.3"	""	"28.2"	""	"28.1"	"30.5"	""	"1071"	"65"	"37.000"	"30.000"	"1.77320715553928E-05"	"17"	"0"	"3.249E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTVVQTFQELVEPR"	"[R].gLTVVQTFQELVEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"0.9759"	"0.0000"	"1"	"1"	"1"	"649.03632"	"1945.09439"	"1945.09559"	"-0.62"	"-0.00040"	"16/150"	"16"	"150"	"1499722.87298584"	"HCD"	"MS2"	"3.720189"	"12.9"	"100.000"	"82.7420"	"28163"	"28163"	"28144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.0"	""	"18.7"	""	"17.9"	""	"21.6"	""	"22.9"	"27.8"	""	"1040"	"83"	"37.000"	"30.000"	"2.47174317490258E-07"	"20"	"0"	"2.738E-06"	"1.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTVVQTFQELVEPR"	"[R].gLTVVQTFQELVEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"973.05090"	"1945.09453"	"1945.09559"	"-0.55"	"-0.00053"	"10/150"	"10"	"150"	"214117.67956543"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"82.6977"	"28196"	"28196"	"28173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.8"	""	"19.7"	""	"16.4"	""	"18.9"	""	"23.9"	"21.0"	""	"1041"	"38"	"37.000"	"30.000"	"0.00782385393349858"	"15"	"0"	"0.0001329"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTVVQTFQELVEPR"	"[R].gLTVVQTFQELVEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"973.05109"	"1945.09490"	"1945.09559"	"-0.36"	"-0.00035"	"6/150"	"6"	"150"	"132624.745788574"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"82.3998"	"28075"	"28075"	"28046"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.6"	""	"6.5"	""	"8.0"	""	"13.3"	""	"15.2"	"12.8"	""	"1041"	"35"	"37.000"	"30.000"	"0.0148395500823578"	"15"	"0"	"0.0001311"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTVVQTFQELVEPR"	"[R].gLTVVQTFQELVEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"973.05139"	"1945.09551"	"1945.09559"	"-0.04"	"-0.00004"	"6/150"	"6"	"150"	"154393.640930176"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"82.3771"	"28015"	"28015"	"27984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"11.0"	""	"9.4"	""	"14.7"	""	"13.7"	"18.5"	""	"1034"	"20"	"37.000"	"30.000"	"0.573443379490661"	"15"	"0.0001889"	"0.0006195"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIQTSALNFLTPLR"	"[R].eLIQTSALNFLTPLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"649.04810"	"1945.12973"	"1945.13198"	"-1.15"	"-0.00075"	"14/156"	"14"	"156"	"1637474.81970215"	"HCD"	"MS2"	"11.26623"	"20.8"	"100.000"	"81.1630"	"27570"	"27570"	"27550"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.2"	""	"35.1"	""	"30.3"	""	"31.2"	"1.7"	"41.7"	"33.8"	""	"801"	"49"	"36.000"	"29.000"	"0.000500728741602197"	"22"	"0"	"9.465E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIQTSALNFLTPLR"	"[R].eLIQTSALNFLTPLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"973.06909"	"1945.13091"	"1945.13198"	"-0.55"	"-0.00054"	"7/156"	"7"	"156"	"135708.266418457"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"81.4377"	"27682"	"27682"	"27662"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"11.5"	""	"10.2"	""	"14.0"	""	"8.5"	"11.2"	""	"767"	"44"	"35.000"	"28.000"	"0.00151623098796127"	"22"	"0.0001859"	"0.0003366"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIQTSALNFLTPLR"	"[R].eLIQTSALNFLTPLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"973.06921"	"1945.13115"	"1945.13198"	"-0.43"	"-0.00041"	"8/156"	"8"	"156"	"210636.749206543"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"81.1396"	"27561"	"27561"	"27534"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.8"	""	"17.7"	""	"16.9"	""	"19.1"	""	"19.2"	"15.1"	""	"767"	"47"	"35.000"	"28.000"	"0.000819908461324105"	"20"	"0"	"2.116E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIQTSALNFLTPLR"	"[R].eLIQTSALNFLTPLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"3"	"3"	"0.9275"	"0.0000"	"1"	"1"	"1"	"649.04858"	"1945.13120"	"1945.13198"	"-0.40"	"-0.00026"	"16/156"	"16"	"156"	"568604.088562012"	"HCD"	"MS2"	"17.7996"	"14.0"	"100.000"	"81.4836"	"27701"	"27701"	"27678"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.0"	""	"16.7"	""	"25.0"	""	"22.5"	""	"25.0"	"28.0"	""	"767"	"69"	"35.000"	"28.000"	"4.77271353614327E-06"	"21"	"0"	"6.878E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIQTSALNFLTPLR"	"[R].eLIQTSALNFLTPLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"649.04858"	"1945.13120"	"1945.13198"	"-0.40"	"-0.00026"	"10/156"	"10"	"156"	"1616801.59631348"	"HCD"	"MS2"	"8.146729"	"15.4"	"100.000"	"81.1815"	"27527"	"27527"	"27504"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.6"	""	"19.3"	""	"24.0"	""	"25.3"	"2.5"	"29.7"	"25.2"	""	"767"	"72"	"35.000"	"28.000"	"2.3810327462723E-06"	"23"	"0"	"1.549E-06"	"1.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIQTSALNFLTPLR"	"[R].eLIQTSALNFLTPLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"973.06958"	"1945.13188"	"1945.13198"	"-0.05"	"-0.00005"	"7/156"	"7"	"156"	"230439.845397949"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"81.1400"	"27510"	"27510"	"27488"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.8"	""	"21.3"	""	"20.6"	""	"22.4"	""	"26.5"	"16.8"	""	"767"	"38"	"35.000"	"28.000"	"0.00565933455511305"	"17"	"0"	"3.774E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIQTSALNFLTPLR"	"[R].eLIQTSALNFLTPLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"973.06964"	"1945.13201"	"1945.13198"	"0.01"	"0.00001"	"6/156"	"6"	"156"	"109492.506103516"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"81.4585"	"27640"	"27640"	"27616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.6"	""	"8.3"	""	"8.1"	""	"12.2"	""	"12.5"	"10.1"	""	"765"	"32"	"35.000"	"28.000"	"0.0240786114942878"	"20"	"0.0001889"	"0.0008942"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDYEIVPINLIK"	"[K].gIDYEIVPINLIk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"649.06354"	"1945.17606"	"1945.17742"	"-0.70"	"-0.00045"	"11/106"	"11"	"106"	"1496690.65228271"	"HCD"	"MS2"	"16.87055"	"37.4"	"100.000"	"79.9532"	"27077"	"27077"	"27055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.7"	""	"47.0"	""	"49.4"	""	"60.7"	"1.7"	"71.2"	"69.5"	""	"495"	"38"	"33.000"	"26.000"	"0.00406982001495695"	"16"	"0"	"0.0001469"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDYEIVPINLIK"	"[K].gIDYEIVPINLIk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"973.09222"	"1945.17717"	"1945.17742"	"-0.13"	"-0.00012"	"9/106"	"9"	"106"	"145751.052124023"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"79.9692"	"27084"	"27084"	"27055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.9"	""	"14.1"	""	"13.7"	""	"13.7"	""	"18.6"	"14.3"	""	"493"	"24"	"33.000"	"26.000"	"0.0880677546044506"	"16"	"0.0001889"	"0.0005058"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDYEIVPINLIK"	"[K].gIDYEIVPINLIk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"649.06396"	"1945.17734"	"1945.17742"	"-0.04"	"-0.00003"	"12/106"	"12"	"106"	"1318231.59075928"	"HCD"	"MS2"	"10.20909"	"37.6"	"100.000"	"79.9769"	"27036"	"27036"	"27009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.0"	""	"51.5"	""	"60.9"	""	"55.6"	""	"73.7"	"65.1"	""	"489"	"25"	"33.000"	"26.000"	"0.0796670733949911"	"15"	"0"	"0.0001487"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDYEIVPINLIK"	"[K].gIDYEIVPINLIk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"P57113"	"Maleylacetoacetate isomerase OS=Rattus norvegicus OX=10116 GN=Gstz1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"973.09283"	"1945.17839"	"1945.17742"	"0.50"	"0.00049"	"10/106"	"10"	"106"	"167663.799377441"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"80.0139"	"27051"	"27051"	"27025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.8"	""	"12.3"	""	"17.0"	""	"13.7"	""	"17.3"	"19.7"	""	"488"	"28"	"33.000"	"26.000"	"0.0427946842449389"	"14"	"0.0001308"	"0.0002756"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPPPKPLPGTLK"	"[K].lPPPkPLPGTLk.[R]"	"N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.09784"	"1945.27896"	"1945.28172"	"-1.41"	"-0.00092"	"9/102"	"9"	"102"	"3695682.70544434"	"HCD"	"MS2"	"55.53909"	"196.3"	"100.000"	"43.8389"	"12332"	"12332"	"12316"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.9"	""	"270.2"	""	"255.4"	""	"325.0"	"1.0"	"367.2"	"390.1"	""	"86"	"17"	"26.000"	"19.000"	"0.0888113466998528"	"14"	"0.0001889"	"0.000802"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPPPKPLPGTLK"	"[K].lPPPkPLPGTLk.[R]"	"N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.09827"	"1945.28025"	"1945.28172"	"-0.76"	"-0.00049"	"7/102"	"7"	"102"	"3756837.79150391"	"HCD"	"MS2"	"33.4681"	"198.2"	"100.000"	"44.1371"	"12504"	"12504"	"12476"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"255.9"	""	"259.3"	""	"255.4"	""	"339.9"	"2.5"	"374.2"	"392.4"	""	"76"	"16"	"25.000"	"18.000"	"0.0894918727880483"	"14"	"0.0001889"	"0.0009578"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDGAETLYSFK"	"[K].kDGAETLYSFk.[Y]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"1"	"3"	"3"	"0.4118"	"0.0000"	"1"	"1"	"1"	"649.37701"	"1946.11649"	"1946.12019"	"-1.90"	"-0.00123"	"16/114"	"16"	"114"	"20601661.6109619"	"HCD"	"MS2"	"0"	"490.2"	"40.699"	"41.9346"	"11565"	"11565"	"11557"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"889.8"	""	"661.5"	""	"322.9"	""	"807.6"	""	"1144.9"	"826.6"	""	"910"	"17"	"36.000"	"29.000"	"0.912034772451149"	"23"	"0"	"0.0001512"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDGAETLYSFK"	"[K].kDGAETLYSFk.[Y]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"1"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"649.37738"	"1946.11759"	"1946.12019"	"-1.34"	"-0.00087"	"9/114"	"9"	"114"	"11831335.7563477"	"HCD"	"MS2"	"7.232209"	"601.5"	"97.178"	"42.2627"	"11743"	"11743"	"11731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1097.2"	""	"822.0"	""	"452.2"	""	"975.9"	"2.1"	"1342.7"	"1014.3"	""	"895"	"28"	"36.000"	"29.000"	"0.0674206662118567"	"23"	"0"	"8.966E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPHVYTMSPTK"	"[R].tQVPHVYTMSPTk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.69672"	"1947.07560"	"1947.07739"	"-0.92"	"-0.00060"	"9/140"	"9"	"140"	"2280974.08654785"	"HCD"	"MS2"	"19.36877"	"144.3"	"100.000"	"36.1342"	"9191"	"9191"	"9162"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"214.6"	""	"161.5"	""	"171.6"	""	"205.6"	""	"265.1"	"352.9"	""	"1162"	"23"	"37.000"	"30.000"	"0.288520138762645"	"14"	"0"	"0.0001406"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQVPHVYTMSPTK"	"[R].tQVPHVYTMSPTk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"649.69702"	"1947.07651"	"1947.07739"	"-0.45"	"-0.00029"	"7/140"	"7"	"140"	"3169348.21130371"	"HCD"	"MS2"	"15.98887"	"165.9"	"100.000"	"36.1752"	"9251"	"9251"	"9225"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"218.1"	""	"192.0"	""	"177.2"	""	"210.5"	"0.8"	"288.1"	"489.6"	""	"1169"	"18"	"37.000"	"30.000"	"0.913659797123639"	"15"	"0"	"3.246E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVGGLSPDTPEEK"	"[K].iFVGGLSPDTPEEk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"649.69916"	"1947.08292"	"1947.08391"	"-0.51"	"-0.00033"	"13/116"	"13"	"116"	"7079719.13592529"	"HCD"	"MS2"	"14.14416"	"243.8"	"100.000"	"55.9960"	"17322"	"17322"	"17301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"384.1"	""	"299.5"	""	"341.4"	""	"402.2"	"9.2"	"426.2"	"445.4"	""	"1113"	"46"	"37.000"	"30.000"	"0.00138824196554375"	"27"	"0"	"8.074E-06"	"1.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVGGLSPDTPEEK"	"[K].iFVGGLSPDTPEEk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"974.04578"	"1947.08428"	"1947.08391"	"0.19"	"0.00018"	"15/116"	"15"	"116"	"952651.018920898"	"HCD"	"MS2"	"0"	"64.0"	"100.000"	"56.0375"	"17339"	"17339"	"17317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.9"	""	"57.8"	""	"58.5"	""	"128.2"	""	"131.4"	"137.5"	""	"1152"	"44"	"37.000"	"30.000"	"0.00230368175862392"	"25"	"0"	"5.346E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVGGLSPDTPEEK"	"[K].iFVGGLSPDTPEEk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"649.69965"	"1947.08438"	"1947.08391"	"0.24"	"0.00016"	"16/116"	"16"	"116"	"6201643.27423096"	"HCD"	"MS2"	"9.674778"	"161.3"	"100.000"	"55.8611"	"17213"	"17213"	"17195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"244.5"	""	"177.4"	""	"165.3"	""	"314.0"	"5.4"	"323.5"	"299.7"	""	"1152"	"57"	"37.000"	"30.000"	"0.000123146616355328"	"25"	"0"	"2.032E-06"	"1.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVGGLSPDTPEEK"	"[K].iFVGGLSPDTPEEk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.7172"	"0.0000"	"1"	"1"	"1"	"974.04602"	"1947.08476"	"1947.08391"	"0.44"	"0.00042"	"12/116"	"12"	"116"	"944157.051879883"	"HCD"	"MS2"	"0"	"65.4"	"100.000"	"55.8082"	"17192"	"17192"	"17163"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.5"	""	"74.9"	""	"56.4"	""	"130.6"	"2.0"	"128.4"	"129.0"	""	"1144"	"99"	"37.000"	"30.000"	"7.31806105978102E-09"	""	"0"	"3.069E-07"	"1.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAYINPDLALEEK"	"[R].lAYINPDLALEEk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"3"	"3"	"0.5938"	"0.0000"	"1"	"1"	"1"	"649.71057"	"1947.11716"	"1947.12030"	"-1.61"	"-0.00105"	"11/122"	"11"	"122"	"2675134.12298584"	"HCD"	"MS2"	"4.079028"	"89.1"	"100.000"	"66.1877"	"21427"	"21427"	"21401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.9"	""	"131.6"	""	"104.4"	""	"139.4"	""	"147.6"	"148.8"	""	"923"	"32"	"36.000"	"29.000"	"0.0272377798499306"	"28"	"0"	"8.33E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAYINPDLALEEK"	"[R].lAYINPDLALEEk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"974.06244"	"1947.11760"	"1947.12030"	"-1.39"	"-0.00135"	"13/122"	"13"	"122"	"242336.739318848"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"66.1730"	"21474"	"21474"	"21443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.9"	""	"22.9"	""	"20.7"	""	"24.0"	""	"28.6"	"32.5"	""	"925"	"43"	"36.000"	"29.000"	"0.00258292465065784"	"16"	"0"	"0.0001743"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAYINPDLALEEK"	"[R].lAYINPDLALEEk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"974.06329"	"1947.11931"	"1947.12030"	"-0.51"	"-0.00049"	"5/122"	"5"	"122"	"112474.971496582"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"66.3538"	"21495"	"21495"	"21465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.9"	""	"13.2"	""	"9.6"	""	"14.4"	""	"17.9"	"13.9"	""	"894"	"19"	"36.000"	"29.000"	"0.571883442958413"	"14"	"0.0006396"	"0.00622"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAYINPDLALEEK"	"[R].lAYINPDLALEEk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"649.71173"	"1947.12064"	"1947.12030"	"0.17"	"0.00011"	"12/122"	"12"	"122"	"2523200.12097168"	"HCD"	"MS2"	"2.272973"	"86.1"	"100.000"	"66.1246"	"21454"	"21454"	"21427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.5"	""	"117.1"	""	"112.6"	""	"136.4"	""	"154.7"	"135.7"	""	"909"	"37"	"36.000"	"29.000"	"0.00902680139938924"	"23"	"0.0001308"	"0.000226"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLSNLDEIKK"	"[K].sLLSNLDEIkk.[E]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.74127"	"1947.20926"	"1947.20934"	"-0.04"	"-0.00003"	"8/106"	"8"	"106"	"5650775.46697998"	"HCD"	"MS2"	"33.73284"	"365.1"	"100.000"	"52.5450"	"15878"	"15878"	"15858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.9"	""	"463.5"	""	"504.8"	""	"590.8"	""	"675.2"	"647.4"	""	"322"	"13"	"32.000"	"25.000"	"0.724145566378193"	"13"	"0.0001889"	"0.0008555"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLSNLDEIKK"	"[K].sLLSNLDEIkk.[E]"	"N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"649.74146"	"1947.20981"	"1947.20934"	"0.24"	"0.00016"	"7/106"	"7"	"106"	"6849180.75689697"	"HCD"	"MS2"	"25.95364"	"433.9"	"100.000"	"52.7868"	"16027"	"16027"	"16006"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"718.2"	""	"510.9"	""	"575.1"	""	"718.4"	"3.1"	"784.6"	"798.5"	""	"320"	"23"	"32.000"	"25.000"	"0.0835833902398591"	"14"	"0"	"2.76E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETIASDVVSLASK"	"[K].gLETIASDVVSLASk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"974.57062"	"1948.13396"	"1948.13668"	"-1.40"	"-0.00136"	"5/134"	"5"	"134"	"71227.7241210938"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"83.9761"	"28718"	"28718"	"28693"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"7.2"	""	"8.2"	""	"11.6"	""	"11.5"	"10.4"	""	"860"	"3"	"36.000"	"29.000"	"21.109038674562"	"13"	"0.003507"	"0.08165"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETIASDVVSLASK"	"[K].gLETIASDVVSLASk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"974.57117"	"1948.13506"	"1948.13668"	"-0.83"	"-0.00081"	"15/134"	"15"	"134"	"225005.416015625"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"83.5692"	"28501"	"28501"	"28476"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.9"	""	"17.6"	""	"26.4"	""	"29.1"	""	"32.4"	"34.6"	""	"843"	"53"	"36.000"	"29.000"	"0.000203140996698991"	"16"	"0"	"9.563E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETIASDVVSLASK"	"[K].gLETIASDVVSLASk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"974.57147"	"1948.13567"	"1948.13668"	"-0.52"	"-0.00051"	"18/134"	"18"	"134"	"287398.157287598"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"83.6722"	"28594"	"28594"	"28571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.5"	""	"23.0"	""	"27.1"	""	"37.2"	""	"43.1"	"45.7"	""	"848"	"59"	"36.000"	"29.000"	"5.25249752688877E-05"	"16"	"0"	"3.028E-06"	"1.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETIASDVVSLASK"	"[K].gLETIASDVVSLASk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"974.57153"	"1948.13579"	"1948.13668"	"-0.46"	"-0.00044"	"9/134"	"9"	"134"	"93301.1922607422"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"83.9052"	"28638"	"28638"	"28612"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"11.1"	""	"10.2"	""	"13.9"	""	"13.5"	"17.2"	""	"847"	"28"	"36.000"	"29.000"	"0.0613554879976206"	"18"	"0.0001889"	"0.001"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMFNDFLSSSSDK"	"[R].lMFNDFLSSSSDk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.34100"	"1949.00846"	"1949.00904"	"-0.30"	"-0.00019"	"12/128"	"12"	"128"	"1741949.83917236"	"HCD"	"MS2"	"16.80811"	"69.2"	"100.000"	"70.1540"	"23038"	"23038"	"23011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.8"	""	"97.6"	""	"97.4"	""	"115.9"	"1.1"	"120.6"	"131.2"	""	"1097"	"22"	"37.000"	"30.000"	"0.31562880562943"	"14"	"0.0001889"	"0.0003823"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ARPEFMLPVHFYGR"	"[K].aRPEFMLPVHFYGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"488.01605"	"1949.04238"	"1949.04172"	"0.34"	"0.00016"	"13/128"	"13"	"128"	"8466315.86126709"	"HCD"	"MS2"	"30.75241"	"174.5"	"100.000"	"47.9974"	"14076"	"14076"	"14050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.4"	""	"205.1"	""	"217.1"	""	"341.0"	"0.9"	"332.1"	"346.0"	""	"1164"	"16"	"37.000"	"30.000"	"1.35183281547984"	"14"	"0"	"0.0001286"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ARPEFMLPVHFYGR"	"[K].aRPEFMLPVHFYGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"488.01614"	"1949.04275"	"1949.04172"	"0.52"	"0.00026"	"11/128"	"11"	"128"	"6876979.29504395"	"HCD"	"MS2"	"24.60981"	"143.4"	"100.000"	"47.7383"	"13922"	"13922"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.0"	""	"175.7"	""	"181.5"	""	"270.9"	""	"269.1"	"289.9"	""	"1171"	"10"	"37.000"	"30.000"	"5.68233585822234"	"13"	"0.0001308"	"0.0002833"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSIINPDWNFEK"	"[R].qSIINPDWNFEk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"650.35541"	"1949.05167"	"1949.05328"	"-0.83"	"-0.00054"	"9/128"	"9"	"128"	"3582607.97790527"	"HCD"	"MS2"	"28.19601"	"178.0"	"100.000"	"60.2261"	"18992"	"18992"	"18969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.5"	""	"255.4"	""	"227.3"	""	"272.6"	"1.0"	"375.2"	"334.8"	""	"1197"	"15"	"37.000"	"30.000"	"1.69849453852227"	"15"	"0.000523"	"0.002769"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSIINPDWNFEK"	"[R].qSIINPDWNFEk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"975.03021"	"1949.05315"	"1949.05328"	"-0.07"	"-0.00007"	"13/128"	"13"	"128"	"254736.221618652"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"60.4862"	"19152"	"19152"	"19123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.6"	""	"26.7"	""	"29.0"	""	"41.6"	""	"44.0"	"41.7"	""	"1201"	"50"	"37.000"	"30.000"	"0.000561711107325604"	"23"	"7.476E-05"	"0.0002042"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSIINPDWNFEK"	"[R].qSIINPDWNFEk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"975.03046"	"1949.05364"	"1949.05328"	"0.18"	"0.00018"	"10/128"	"10"	"128"	"275727.719299316"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"60.3596"	"19047"	"19047"	"19017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"36.9"	""	"30.7"	""	"38.3"	""	"48.3"	"41.8"	""	"1196"	"29"	"37.000"	"30.000"	"0.0737396690270887"	"21"	"0.0001889"	"0.0004493"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSNSALGHVNSTIK"	"[K].ySNSALGHVNSTIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"650.36676"	"1949.08573"	"1949.08565"	"0.04"	"0.00003"	"16/146"	"16"	"146"	"3637027.26422119"	"HCD"	"MS2"	"9.734382"	"167.0"	"100.000"	"34.5174"	"8528"	"8528"	"8499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"230.5"	""	"202.1"	""	"205.7"	""	"286.0"	"0.7"	"313.8"	"344.6"	""	"1093"	"37"	"37.000"	"30.000"	"0.0121783980907622"	"16"	"0"	"1.283E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSNSALGHVNSTIK"	"[K].ySNSALGHVNSTIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.36731"	"1949.08738"	"1949.08565"	"0.89"	"0.00058"	"13/146"	"13"	"146"	"2837037.80407715"	"HCD"	"MS2"	"12.54861"	"135.3"	"100.000"	"34.5815"	"8597"	"8597"	"8570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"172.8"	""	"168.6"	""	"175.3"	""	"235.4"	""	"270.8"	"270.8"	""	"1097"	"30"	"37.000"	"30.000"	"0.0501391112946432"	"14"	"0"	"2.694E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WKNPVTSVDAAFR"	"[R].wkNPVTSVDAAFR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.37146"	"1949.09983"	"1949.10090"	"-0.55"	"-0.00036"	"11/124"	"11"	"124"	"30628284.52771"	"HCD"	"MS2"	"5.84952"	"762.2"	"58.818"	"49.5487"	"14706"	"14706"	"14686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1654.9"	""	"1372.8"	""	"936.4"	""	"1137.4"	""	"1117.2"	"970.7"	""	"1062"	"20"	"37.000"	"30.000"	"0.557307029614384"	"14"	"0"	"9.878E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WKNPVTSVDAAFR"	"[R].wkNPVTSVDAAFR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.37158"	"1949.10019"	"1949.10090"	"-0.36"	"-0.00024"	"11/124"	"11"	"124"	"24706747.5712891"	"HCD"	"MS2"	"11.43183"	"1064.4"	"100.000"	"49.2708"	"14549"	"14549"	"14527"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2340.4"	""	"1905.0"	""	"1300.1"	""	"1576.3"	"16.0"	"1516.7"	"1380.8"	""	"1062"	"29"	"37.000"	"30.000"	"0.0693576741598008"	"14"	"0"	"4.383E-06"	"1.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WKNPVTSVDAAFR"	"[R].wkNPVTSVDAAFR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.37164"	"1949.10038"	"1949.10090"	"-0.27"	"-0.00018"	"10/124"	"10"	"124"	"18623324.2188721"	"HCD"	"MS2"	"5.593716"	"298.7"	"30.444"	"49.8659"	"14835"	"14835"	"14814"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"525.6"	""	"476.5"	""	"403.1"	""	"463.5"	""	"496.3"	"463.5"	""	"1068"	"13"	"37.000"	"30.000"	"2.56177661571992"	"13"	"0.0001308"	"0.0002059"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WKNPVTSVDAAFR"	"[R].wkNPVTSVDAAFR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"975.05383"	"1949.10039"	"1949.10090"	"-0.26"	"-0.00026"	"9/124"	"9"	"124"	"556301.58380127"	"HCD"	"MS2"	"0"	"37.1"	"100.000"	"49.7245"	"14778"	"14778"	"14750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.7"	""	"68.1"	""	"43.7"	""	"55.0"	""	"60.3"	"47.8"	""	"1069"	"26"	"37.000"	"30.000"	"0.13030098824181"	"14"	"0.0005564"	"0.003388"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WKNPVTSVDAAFR"	"[R].wkNPVTSVDAAFR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"975.05432"	"1949.10137"	"1949.10090"	"0.24"	"0.00023"	"7/124"	"7"	"124"	"329962.971557617"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"49.4846"	"14637"	"14637"	"14607"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.0"	""	"44.0"	""	"28.5"	""	"36.7"	""	"38.0"	"31.8"	""	"1049"	"40"	"37.000"	"30.000"	"0.00525709097371858"	"21"	"0.0001889"	"0.0008505"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WKNPVTSVDAAFR"	"[R].wkNPVTSVDAAFR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.37219"	"1949.10202"	"1949.10090"	"0.58"	"0.00037"	"11/124"	"11"	"124"	"18223206.956543"	"HCD"	"MS2"	"2.082794"	"363.1"	"43.211"	"49.5859"	"14674"	"14674"	"14655"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"695.2"	""	"598.0"	""	"471.5"	""	"546.5"	""	"587.0"	"534.2"	""	"1055"	"18"	"37.000"	"30.000"	"0.920921185665566"	"14"	"0.0001859"	"0.0003638"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVDEAIALFQK"	"[R].kVDEAIALFQk.[M]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.40723"	"1949.20713"	"1949.20386"	"1.68"	"0.00109"	"14/102"	"14"	"102"	"6422190.64190674"	"HCD"	"MS2"	"45.80153"	"310.5"	"100.000"	"55.7554"	"17170"	"17170"	"17147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"447.7"	""	"392.1"	""	"439.3"	""	"516.0"	"8.0"	"565.3"	"572.6"	""	"304"	"4"	"31.000"	"24.000"	"5.69958963413135"	"13"	"0.0001889"	"0.0009316"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEHSFTVMEFVLPR"	"[K].eEHSFTVMEFVLPR.[F]"	"N-Term(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"650.67096"	"1949.99833"	"1949.99925"	"-0.47"	"-0.00031"	"7/120"	"7"	"120"	"3263634.91894531"	"HCD"	"MS2"	"26.46729"	"41.4"	"100.000"	"62.3237"	"19902"	"19902"	"19875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.6"	""	"58.0"	""	"54.8"	""	"71.5"	"1.0"	"66.9"	"77.3"	""	"1018"	"43"	"37.000"	"30.000"	"0.00253932204117146"	"16"	"0"	"9.203E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEHSFTVMEFVLPR"	"[K].eEHSFTVMEFVLPR.[F]"	"N-Term(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.67224"	"1950.00217"	"1949.99925"	"1.50"	"0.00097"	"10/120"	"10"	"120"	"2895264.46972656"	"HCD"	"MS2"	"26.99097"	"44.5"	"100.000"	"62.1505"	"19778"	"19778"	"19753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.4"	""	"62.3"	""	"69.0"	""	"64.6"	"1.8"	"79.5"	"75.7"	""	"1034"	"20"	"37.000"	"30.000"	"0.472596545840119"	"14"	"0"	"4.298E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPQSMVWLPVLHR"	"[R].lEPQSmVWLPVLHR.[V]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.69806"	"1950.07962"	"1950.08325"	"-1.86"	"-0.00121"	"16/130"	"16"	"130"	"1030768.22729492"	"HCD"	"MS2"	"0"	"39.3"	"100.000"	"58.6633"	"18359"	"18359"	"18329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.9"	""	"53.0"	""	"58.3"	""	"68.6"	"1.6"	"73.9"	"68.9"	""	"1127"	"34"	"37.000"	"30.000"	"0.0209842726474449"	"15"	"0"	"6.7E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYANFFPYGDASK"	"[K].iYANFFPYGDASk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2;Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"651.01569"	"1951.03250"	"1951.03657"	"-2.08"	"-0.00136"	"11/118"	"11"	"118"	"2813567.76824951"	"HCD"	"MS2"	"12.29105"	"101.3"	"100.000"	"66.4232"	"21523"	"21523"	"21497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.1"	""	"125.3"	""	"143.9"	""	"172.8"	""	"196.0"	"209.9"	""	"1214"	"25"	"37.000"	"30.000"	"0.194620547997482"	"15"	"0"	"0.0001797"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYANFFPYGDASK"	"[K].iYANFFPYGDASk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2;Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"976.02075"	"1951.03423"	"1951.03657"	"-1.20"	"-0.00117"	"13/118"	"13"	"118"	"618841.564880371"	"HCD"	"MS2"	"0"	"47.3"	"100.000"	"66.4084"	"21570"	"21570"	"21539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.2"	""	"51.5"	""	"61.7"	""	"87.7"	""	"90.3"	"100.5"	""	"1210"	"41"	"37.000"	"30.000"	"0.00488377193300547"	"16"	"0"	"0.0001123"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYANFFPYGDASK"	"[K].iYANFFPYGDASk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2;Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"976.02087"	"1951.03447"	"1951.03657"	"-1.08"	"-0.00105"	"14/118"	"14"	"118"	"605471.815490723"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"66.5107"	"21559"	"21559"	"21529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.9"	""	"58.3"	""	"58.0"	""	"89.7"	""	"97.5"	"98.8"	""	"1201"	"32"	"37.000"	"30.000"	"0.0403193026182034"	"17"	"0"	"0.0001433"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYANFFPYGDASK"	"[K].iYANFFPYGDASk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2;Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"P84076; P62749"	"Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"651.01636"	"1951.03452"	"1951.03657"	"-1.05"	"-0.00068"	"12/118"	"12"	"118"	"3285536.1875"	"HCD"	"MS2"	"20.85591"	"97.9"	"100.000"	"66.3532"	"21547"	"21547"	"21523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.2"	""	"112.5"	""	"128.0"	""	"181.8"	""	"183.4"	"206.1"	""	"1201"	"35"	"37.000"	"30.000"	"0.019342518091657"	"16"	"0"	"9.201E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQILMPNIGYGSNK"	"[K].gQILMPnIGYGSNk.[K]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"651.03473"	"1951.08963"	"1951.07230"	"8.88"	"0.00578"	"17/128"	"17"	"128"	"2299047.33258057"	"HCD"	"MS2"	"40.35298"	"84.2"	"100.000"	"53.3721"	"16207"	"16207"	"16194"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.3"	""	"114.3"	""	"121.3"	""	"119.4"	""	"161.4"	"147.8"	""	"1053"	"40"	"37.000"	"30.000"	"0.00537524638172094"	"15"	"0"	"0.0001349"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWLSQNLPISSGK"	"[R].yWLSQNLPISSGk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"976.05542"	"1951.10356"	"1951.10532"	"-0.90"	"-0.00088"	"15/126"	"15"	"126"	"404311.485290527"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"61.9388"	"19745"	"19745"	"19715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.3"	""	"43.0"	""	"43.7"	""	"52.1"	"2.3"	"40.6"	"50.3"	""	"956"	"49"	"36.000"	"29.000"	"0.000596249319808127"	"24"	"0"	"8.84E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWLSQNLPISSGK"	"[R].yWLSQNLPISSGk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"651.04016"	"1951.10593"	"1951.10532"	"0.31"	"0.00020"	"12/126"	"12"	"126"	"5162369.33990479"	"HCD"	"MS2"	"12.12836"	"146.6"	"100.000"	"61.9111"	"19733"	"19733"	"19715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"236.6"	""	"193.7"	""	"217.0"	""	"252.7"	"0.9"	"246.4"	"239.5"	""	"949"	"43"	"36.000"	"29.000"	"0.0024223462248833"	"17"	"0"	"6.834E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWLSQNLPISSGK"	"[R].yWLSQNLPISSGk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"651.04022"	"1951.10611"	"1951.10532"	"0.41"	"0.00026"	"12/126"	"12"	"126"	"5030084.57629395"	"HCD"	"MS2"	"15.07653"	"145.2"	"100.000"	"61.7916"	"19631"	"19631"	"19609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"236.4"	""	"189.3"	""	"209.2"	""	"232.6"	"0.9"	"249.5"	"256.0"	""	"963"	"47"	"36.000"	"29.000"	"0.00102469895064068"	"21"	"0"	"5.134E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWLSQNLPISSGK"	"[R].yWLSQNLPISSGk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"976.05701"	"1951.10674"	"1951.10532"	"0.73"	"0.00071"	"16/126"	"16"	"126"	"392364.436523438"	"HCD"	"MS2"	"0"	"29.8"	"100.000"	"61.8469"	"19654"	"19654"	"19625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.6"	""	"41.8"	""	"43.6"	""	"44.3"	""	"49.0"	"51.9"	""	"957"	"42"	"36.000"	"29.000"	"0.00301913089333773"	"23"	"0"	"3.901E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNLLLDTEGYVK"	"[K].lDNLLLDTEGYVk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"651.04327"	"1951.11527"	"1951.11521"	"0.03"	"0.00002"	"8/130"	"8"	"130"	"1911701.59423828"	"HCD"	"MS2"	"37.35637"	"47.8"	"100.000"	"75.7034"	"25355"	"25355"	"25327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.9"	""	"61.5"	""	"59.9"	""	"80.9"	"0.7"	"92.7"	"86.1"	""	"917"	"13"	"36.000"	"29.000"	"2.49080276989281"	"14"	"0.0001889"	"0.0009033"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLGYKPEEYK"	"[R].hLGYkPEEYk.[M]"	"N-Term(TMT6plex); K5(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"488.53656"	"1951.12441"	"1951.12561"	"-0.61"	"-0.00030"	"7/84"	"7"	"84"	"18248554.6824951"	"HCD"	"MS2"	"43.19095"	"337.9"	"46.529"	"31.6974"	"7426"	"7426"	"7402"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"446.9"	""	"407.4"	""	"426.7"	""	"544.7"	"0.7"	"681.7"	"699.0"	""	"875"	"11"	"36.000"	"29.000"	"3.81924973669799"	"13"	"0.0001308"	"0.0002778"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].qLGSGLLLVTGPLALNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"976.09723"	"1951.18718"	"1951.19016"	"-1.53"	"-0.00149"	"19/172"	"19"	"172"	"320615.821899414"	"HCD"	"MS2"	"33.82227"	"16.7"	"100.000"	"77.8873"	"26184"	"26184"	"26153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.4"	""	"23.8"	""	"24.4"	""	"27.4"	""	"30.6"	"29.3"	""	"423"	"66"	"33.000"	"26.000"	"5.3494652624836E-06"	"17"	"0"	"5.412E-06"	"1.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].qLGSGLLLVTGPLALNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"976.09814"	"1951.18901"	"1951.19016"	"-0.59"	"-0.00057"	"6/172"	"6"	"172"	"106615.710144043"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"78.1139"	"26327"	"26327"	"26303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"12.8"	""	"9.6"	""	"13.5"	""	"11.1"	"12.5"	""	"417"	"17"	"33.000"	"26.000"	"0.390936354932057"	"14"	"0.003383"	"0.07632"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].qLGSGLLLVTGPLALNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"976.09857"	"1951.18987"	"1951.19016"	"-0.15"	"-0.00015"	"13/172"	"13"	"172"	"241927.809020996"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"77.8126"	"26204"	"26204"	"26181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.0"	""	"15.7"	""	"16.0"	""	"21.4"	""	"24.5"	"23.9"	""	"405"	"76"	"33.000"	"26.000"	"5.2896267426584E-07"	"23"	"0"	"2.134E-06"	"1.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].qLGSGLLLVTGPLALNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.06879"	"1951.19181"	"1951.19016"	"0.84"	"0.00055"	"14/172"	"14"	"172"	"1098129.54034424"	"HCD"	"MS2"	"31.73762"	"18.6"	"100.000"	"78.2024"	"26312"	"26312"	"26289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.5"	""	"24.4"	""	"24.3"	""	"36.6"	"2.4"	"37.9"	"31.0"	""	"396"	"16"	"32.000"	"25.000"	"0.536617943114387"	"13"	"0"	"0.0001196"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].qLGSGLLLVTGPLALNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"651.06879"	"1951.19181"	"1951.19016"	"0.84"	"0.00055"	"14/172"	"14"	"172"	"1557379.7868042"	"HCD"	"MS2"	"30.94617"	"15.1"	"100.000"	"78.1023"	"26322"	"26322"	"26303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"20.3"	""	"24.8"	""	"28.1"	""	"23.2"	"25.0"	""	"396"	"46"	"32.000"	"25.000"	"0.000451507730256083"	"21"	"0"	"6.087E-06"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].qLGSGLLLVTGPLALNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"651.07062"	"1951.19730"	"1951.19016"	"3.66"	"0.00238"	"18/172"	"18"	"172"	"2754898.597229"	"HCD"	"MS2"	"28.05365"	"22.1"	"100.000"	"77.8712"	"26177"	"26177"	"26153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.5"	""	"28.1"	""	"33.5"	""	"36.8"	""	"43.0"	"43.6"	""	"344"	"48"	"32.000"	"25.000"	"0.000292771263443931"	"19"	"0"	"6.161E-06"	"1.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGSGLLLVTGPLALNR"	"[K].qLGSGLLLVTGPLALNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"651.07074"	"1951.19767"	"1951.19016"	"3.85"	"0.00250"	"17/172"	"17"	"172"	"2638948.56463623"	"HCD"	"MS2"	"38.10128"	"21.2"	"100.000"	"77.8103"	"26203"	"26203"	"26181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.4"	""	"29.4"	""	"31.0"	""	"36.6"	""	"39.4"	"40.8"	""	"344"	"46"	"32.000"	"25.000"	"0.000459757102290089"	"18"	"0"	"5.114E-06"	"1.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSDGIYIINLK"	"[R].kSDGIYIINLk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"1"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"651.07617"	"1951.21396"	"1951.21951"	"-2.84"	"-0.00185"	"7/102"	"7"	"102"	"3308713.15130615"	"HCD"	"MS2"	"9.333617"	"176.9"	"100.000"	"50.4902"	"15038"	"15038"	"15015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"258.0"	""	"279.9"	""	"262.5"	""	"269.5"	""	"313.2"	"293.9"	""	"254"	"16"	"31.000"	"24.000"	"0.352211653290784"	""	"0.0001889"	"0.0004177"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSDGIYIINLK"	"[R].kSDGIYIINLk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"1"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"651.07697"	"1951.21634"	"1951.21951"	"-1.62"	"-0.00106"	"11/102"	"11"	"102"	"3091844.27142334"	"HCD"	"MS2"	"9.67453"	"164.4"	"100.000"	"50.7894"	"15210"	"15210"	"15190"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.8"	""	"243.3"	""	"235.2"	""	"253.6"	""	"290.9"	"295.0"	""	"252"	"19"	"31.000"	"24.000"	"0.162693628475305"	"23"	"0.0001889"	"0.0004302"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFQTYFLTPSVK"	"[R].yFQTYFLTPSVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.36810"	"1952.08976"	"1952.09336"	"-1.84"	"-0.00120"	"11/118"	"11"	"118"	"1159911.03131104"	"HCD"	"MS2"	"18.38341"	"46.0"	"100.000"	"69.9588"	"23010"	"23010"	"22986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.0"	""	"58.1"	""	"81.4"	""	"65.9"	"0.3"	"85.9"	"85.5"	""	"1048"	"13"	"37.000"	"30.000"	"2.70602177498565"	"13"	"0.0001889"	"0.0009615"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVMLIk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"976.57874"	"1952.15019"	"1952.15424"	"-2.07"	"-0.00202"	"17/104"	"17"	"104"	"1367166.14599609"	"HCD"	"MS2"	"0"	"94.3"	"100.000"	"71.3057"	"23560"	"23560"	"23530"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.4"	""	"92.4"	""	"65.5"	""	"150.2"	""	"252.9"	"277.5"	""	"685"	"43"	"35.000"	"28.000"	"0.00159463237031613"	"18"	"0"	"7.349E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVMLIk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.9157"	"0.0000"	"1"	"1"	"1"	"976.57977"	"1952.15227"	"1952.15424"	"-1.01"	"-0.00099"	"11/104"	"11"	"104"	"1158699.51605225"	"HCD"	"MS2"	"0"	"80.4"	"100.000"	"71.4109"	"23551"	"23551"	"23523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.4"	""	"74.8"	""	"65.2"	""	"135.1"	"2.2"	"198.0"	"234.6"	""	"658"	"83"	"35.000"	"28.000"	"1.5107614622333E-07"	"24"	"0"	"7.602E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVMLIk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"651.38910"	"1952.15274"	"1952.15424"	"-0.77"	"-0.00050"	"14/104"	"14"	"104"	"6584491.3704834"	"HCD"	"MS2"	"6.972093"	"138.7"	"100.000"	"71.7426"	"23686"	"23686"	"23667"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.3"	""	"178.1"	""	"173.0"	""	"208.4"	""	"287.8"	"327.2"	""	"654"	"24"	"35.000"	"28.000"	"0.141758057232722"	"17"	"0.0002277"	"0.001338"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVMLIk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"976.58026"	"1952.15325"	"1952.15424"	"-0.51"	"-0.00050"	"19/104"	"19"	"104"	"492384.914123535"	"HCD"	"MS2"	"0"	"36.0"	"100.000"	"71.7061"	"23671"	"23671"	"23651"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.7"	""	"35.0"	""	"28.4"	""	"54.3"	"3.9"	"94.8"	"102.5"	""	"643"	"62"	"35.000"	"28.000"	"1.85430417980609E-05"	"20"	"0"	"9.319E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVMLIk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"651.38928"	"1952.15329"	"1952.15424"	"-0.49"	"-0.00032"	"8/104"	"8"	"104"	"5091694.64794922"	"HCD"	"MS2"	"0.9184757"	"117.8"	"100.000"	"71.6260"	"23691"	"23691"	"23674"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.9"	""	"131.7"	""	"121.8"	""	"171.0"	"1.2"	"283.8"	"305.7"	""	"643"	"29"	"35.000"	"28.000"	"0.0402884887743665"	"20"	"0.0001859"	"0.0003578"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVMLIk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.9238"	"0.0000"	"1"	"1"	"1"	"976.58038"	"1952.15349"	"1952.15424"	"-0.39"	"-0.00038"	"12/104"	"12"	"104"	"637360.790222168"	"HCD"	"MS2"	"0"	"43.0"	"100.000"	"71.6007"	"23680"	"23680"	"23658"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.0"	""	"43.0"	""	"30.8"	""	"63.3"	"0.3"	"112.0"	"131.9"	""	"643"	"105"	"35.000"	"28.000"	"1.11990446784078E-09"	"27"	"0"	"2.853E-07"	"1.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVMLIk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"651.39044"	"1952.15677"	"1952.15424"	"1.30"	"0.00084"	"14/104"	"14"	"104"	"8621511.80072021"	"HCD"	"MS2"	"1.483803"	"183.2"	"100.000"	"71.4225"	"23556"	"23556"	"23539"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.3"	""	"173.0"	""	"147.3"	""	"291.1"	""	"464.8"	"549.0"	""	"625"	"40"	"34.000"	"27.000"	"0.00283693915680683"	"27"	"0"	"6.426E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVMLIk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.7755"	"0.0000"	"1"	"1"	"1"	"651.39087"	"1952.15805"	"1952.15424"	"1.95"	"0.00127"	"10/104"	"10"	"104"	"7911603.11676025"	"HCD"	"MS2"	"1.083096"	"173.3"	"100.000"	"71.3195"	"23565"	"23565"	"23546"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.0"	""	"165.2"	""	"138.7"	""	"269.5"	""	"460.1"	"507.3"	""	"619"	"49"	"34.000"	"27.000"	"0.000433172276336225"	"26"	"0"	"1.805E-05"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KESYSVYVYK"	"[R].kESYSVYVYk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q00715"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q00715"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"7"	"651.71509"	"1953.13071"	"1953.13003"	"0.35"	"0.00023"	"10/96"	"10"	"96"	"5491793.33703613"	"HCD"	"MS2"	"36.38759"	"291.8"	"100.000"	"38.9229"	"10379"	"10379"	"10350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"318.9"	""	"347.1"	""	"345.2"	""	"498.8"	""	"649.8"	"616.8"	""	"808"	"1"	"36.000"	"29.000"	"33.9923637224659"	"13"	"0.0001889"	"0.0009762"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYSEYTDGTFTK"	"[K].aLYSEYTDGTFTk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"652.01160"	"1954.02024"	"1954.02098"	"-0.38"	"-0.00025"	"11/112"	"11"	"112"	"4040666.31890869"	"HCD"	"MS2"	"66.4257"	"145.6"	"100.000"	"51.2720"	"15358"	"15358"	"15330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.4"	""	"203.7"	""	"188.8"	""	"230.9"	"1.0"	"273.9"	"281.3"	""	"1298"	"40"	"38.000"	"31.000"	"0.00649"	"16"	"0"	"5.401E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYSEYTDGTFTK"	"[K].aLYSEYTDGTFTk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"977.51379"	"1954.02031"	"1954.02098"	"-0.34"	"-0.00033"	"12/112"	"12"	"112"	"477944.644165039"	"HCD"	"MS2"	"0"	"45.9"	"100.000"	"51.5525"	"15523"	"15523"	"15494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.1"	""	"58.3"	""	"51.7"	""	"81.6"	""	"91.9"	"87.9"	""	"1298"	"46"	"38.000"	"31.000"	"0.0017031178346565"	"15"	"0"	"5.446E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYSEYTDGTFTK"	"[K].aLYSEYTDGTFTk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"977.51404"	"1954.02080"	"1954.02098"	"-0.09"	"-0.00009"	"13/112"	"13"	"112"	"340996.638183594"	"HCD"	"MS2"	"0"	"33.9"	"100.000"	"51.3916"	"15407"	"15407"	"15378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.5"	""	"48.6"	""	"39.2"	""	"53.6"	""	"74.3"	"59.1"	""	"1301"	"47"	"38.000"	"31.000"	"0.00130691487460198"	"16"	"0"	"4.282E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYSEYTDGTFTK"	"[K].aLYSEYTDGTFTk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.01184"	"1954.02097"	"1954.02098"	"-0.01"	"0.00000"	"12/112"	"12"	"112"	"3375944.378479"	"HCD"	"MS2"	"29.9085"	"134.7"	"100.000"	"51.5179"	"15509"	"15509"	"15478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.1"	""	"172.6"	""	"181.7"	""	"220.9"	""	"251.0"	"248.0"	""	"1301"	"45"	"38.000"	"31.000"	"0.00201023717885009"	"16"	"0"	"4.75E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLmDLNEPYPk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"652.02948"	"1954.07389"	"1954.07599"	"-1.08"	"-0.00070"	"12/104"	"12"	"104"	"1574286.35803223"	"HCD"	"MS2"	"2.22463"	"51.6"	"100.000"	"66.0785"	"21435"	"21435"	"21411"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.8"	""	"65.0"	""	"73.2"	""	"116.7"	"1.3"	"88.3"	"85.8"	""	"1160"	"29"	"37.000"	"30.000"	"0.0743751737940492"	"20"	"0.0001859"	"0.0003269"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLmDLNEPYPk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"652.03009"	"1954.07572"	"1954.07599"	"-0.14"	"-0.00009"	"13/104"	"13"	"104"	"3451023.52679443"	"HCD"	"MS2"	"4.600522"	"89.7"	"100.000"	"66.0565"	"21373"	"21373"	"21353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.8"	""	"117.5"	""	"121.9"	""	"233.2"	"2.1"	"150.6"	"143.1"	""	"1146"	"44"	"37.000"	"30.000"	"0.00220879098942487"	"22"	"0"	"5.398E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLmDLNEPYPk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"977.54187"	"1954.07646"	"1954.07599"	"0.24"	"0.00024"	"14/104"	"14"	"104"	"435519.279907227"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"65.8981"	"21362"	"21362"	"21331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.4"	""	"41.4"	""	"36.5"	""	"69.7"	"0.8"	"46.2"	"41.2"	""	"1137"	"44"	"37.000"	"30.000"	"0.00203109608489372"	"17"	"0.0001889"	"0.0005667"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLmDLNEPYPk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"977.54303"	"1954.07878"	"1954.07599"	"1.43"	"0.00140"	"14/104"	"14"	"104"	"335643.579162598"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"65.9202"	"21318"	"21318"	"21289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.2"	""	"28.5"	""	"27.7"	""	"63.3"	"1.8"	"40.9"	"32.5"	""	"1120"	"46"	"37.000"	"30.000"	"0.00157829444150809"	"18"	"0.0001889"	"0.0009587"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLMDLNEPYPK"	"[R].iFLmDLNEPYPk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"652.03210"	"1954.08176"	"1954.07599"	"2.95"	"0.00192"	"11/104"	"11"	"104"	"2407438.43591309"	"HCD"	"MS2"	"12.73737"	"73.4"	"100.000"	"65.7762"	"21312"	"21312"	"21283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.3"	""	"100.5"	""	"103.6"	""	"163.1"	""	"128.9"	"117.8"	""	"1122"	"29"	"37.000"	"30.000"	"0.0770837547982021"	"21"	"0"	"0.0001205"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVITQVFHVPLEER"	"[K].aSVITQVFHVPLEER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"652.03760"	"1954.09824"	"1954.09593"	"1.18"	"0.00077"	"11/154"	"11"	"154"	"3475214.81512451"	"HCD"	"MS2"	"27.52241"	"116.4"	"100.000"	"60.7839"	"19273"	"19273"	"19251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.5"	""	"138.9"	""	"154.2"	""	"197.4"	""	"248.3"	"229.0"	""	"1010"	"25"	"37.000"	"30.000"	"0.142985295787869"	"16"	"0"	"5.995E-06"	"1.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVITQVFHVPLEER"	"[K].aSVITQVFHVPLEER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"652.03809"	"1954.09970"	"1954.09593"	"1.93"	"0.00126"	"8/154"	"8"	"154"	"3409431.32342529"	"HCD"	"MS2"	"25.11787"	"112.3"	"100.000"	"60.6341"	"19159"	"19159"	"19129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.6"	""	"136.2"	""	"158.9"	""	"199.8"	""	"234.5"	"217.0"	""	"1003"	"39"	"37.000"	"30.000"	"0.00604325524096457"	"16"	"0"	"4.959E-06"	"1.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEQYKEESK"	"[K].lLEQYkEESk.[K]"	"N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.05328"	"1954.14530"	"1954.14640"	"-0.57"	"-0.00037"	"8/96"	"8"	"96"	"7794587.44281006"	"HCD"	"MS2"	"15.99399"	"564.7"	"100.000"	"39.3067"	"10493"	"10493"	"10470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"743.2"	""	"509.5"	""	"475.5"	""	"1257.3"	"5.3"	"1345.4"	"1033.3"	""	"712"	"6"	"35.000"	"28.000"	"9.23527852914298"	"13"	"0.0001889"	"0.0009032"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWDLAQQMSLNSYR"	"[K].iWDLAqQMSLNSYR.[A]"	"N-Term(TMT6plex); Q6(Deamidated)"	"1"	"1"	"Q4QR85"	"Methylosome protein 50 OS=Rattus norvegicus OX=10116 GN=Wdr77 PE=1 SV=1"	"Q4QR85"	"Methylosome protein 50 OS=Rattus norvegicus OX=10116 GN=Wdr77 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"652.33276"	"1954.98374"	"1954.98941"	"-2.90"	"-0.00189"	"10/138"	"10"	"138"	"519756.171630859"	"HCD"	"MS2"	"5.031736"	"21.6"	"100.000"	"75.1965"	"25096"	"25096"	"25073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.6"	""	"23.8"	""	"25.5"	""	"38.7"	"1.6"	"50.1"	"42.0"	""	"1128"	"6"	"37.000"	"30.000"	"14.8347114742899"	"14"	"0.0004166"	"0.002303"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSILPEDAILPLMK"	"[K].gSILPEDAILPLMk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"978.08521"	"1955.16313"	"1955.16514"	"-1.03"	"-0.00100"	"11/114"	"11"	"114"	"153358.661865234"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"80.2470"	"27146"	"27146"	"27121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.9"	""	"12.8"	""	"11.4"	""	"11.3"	""	"18.1"	"18.2"	""	"498"	"34"	"33.000"	"26.000"	"0.00970955546824593"	"22"	"0.0001889"	"0.000983"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSILPEDAILPLMK"	"[K].gSILPEDAILPLMk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"652.39276"	"1955.16373"	"1955.16514"	"-0.72"	"-0.00047"	"12/114"	"12"	"114"	"1401897.05584717"	"HCD"	"MS2"	"2.536408"	"35.7"	"100.000"	"80.2186"	"27185"	"27185"	"27167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.8"	""	"53.5"	""	"58.1"	""	"47.0"	"0.5"	"64.2"	"71.4"	""	"496"	"44"	"33.000"	"26.000"	"0.00100104057455966"	"17"	"0"	"8.361E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSILPEDAILPLMK"	"[K].gSILPEDAILPLMk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.39313"	"1955.16483"	"1955.16514"	"-0.16"	"-0.00010"	"12/114"	"12"	"114"	"1213305.56951904"	"HCD"	"MS2"	"4.951578"	"33.1"	"100.000"	"80.2056"	"27129"	"27129"	"27105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.1"	""	"52.8"	""	"47.7"	""	"36.8"	"2.1"	"60.2"	"64.0"	""	"482"	"38"	"33.000"	"26.000"	"0.00392660343866173"	"15"	"0"	"0.0001125"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHINLPGFCGQNPLR"	"[R].dHINLPGFcGQNPLR.[G]"	"N-Term(TMT6plex); C9(Methylthio)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"652.66357"	"1955.97617"	"1955.97814"	"-1.01"	"-0.00066"	"6/134"	"6"	"134"	"2775208.98199463"	"HCD"	"MS2"	"0"	"70.8"	"100.000"	"58.4243"	"18261"	"18261"	"18234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.4"	""	"72.1"	""	"84.8"	""	"117.9"	""	"141.5"	"164.1"	""	"970"	"36"	"36.000"	"29.000"	"0.0135126876678544"	"19"	"0"	"3.19E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHINLPGFCGQNPLR"	"[R].dHINLPGFcGQNPLR.[G]"	"N-Term(TMT6plex); C9(Methylthio)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.66388"	"1955.97708"	"1955.97814"	"-0.54"	"-0.00035"	"10/134"	"10"	"134"	"2798293.39276123"	"HCD"	"MS2"	"0"	"68.9"	"100.000"	"58.5886"	"18382"	"18382"	"18357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.7"	""	"73.3"	""	"85.4"	""	"111.0"	"0.3"	"134.8"	"163.7"	""	"971"	"27"	"36.000"	"29.000"	"0.0889588652061223"	"14"	"0"	"0.0001203"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDELMASLSDFK"	"[R].eLDELMASLSDFk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"652.68439"	"1956.03861"	"1956.04000"	"-0.71"	"-0.00046"	"8/116"	"8"	"116"	"150787.464172363"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"91.2924"	"31530"	"31530"	"31523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"8.0"	""	"11.9"	""	"9.6"	""	"13.1"	"14.2"	""	"1153"	"25"	"37.000"	"30.000"	"0.19579396964837"	"16"	"0.0001889"	"0.0006776"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDELMASLSDFK"	"[R].eLDELMASLSDFk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"978.52332"	"1956.03935"	"1956.04000"	"-0.33"	"-0.00032"	"3/116"	"3"	"116"	"65006.8512573242"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"91.1752"	"31460"	"31460"	"31453"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"4.9"	""	"5.2"	""	"5.2"	""	"8.8"	"7.7"	""	"1145"	"4"	"37.000"	"30.000"	"24.0312018334852"	"13"	"0.006092"	"0.218"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDELMASLSDFK"	"[R].eLDELMASLSDFk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"652.68488"	"1956.04007"	"1956.04000"	"0.04"	"0.00002"	"6/116"	"6"	"116"	"139937.651123047"	"HCD"	"MS2"	"3.886684"	"7.3"	"100.000"	"91.1078"	"31437"	"31437"	"31427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"9.3"	""	"12.1"	""	"11.1"	""	"15.0"	"14.6"	""	"1145"	"16"	"37.000"	"30.000"	"1.32365709237553"	"16"	"0.0001889"	"0.0006911"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLQANPILEAFGNAK"	"[RK].QLLQANPILEAFGNAk.[T]"	"K16(TMT6plex)"	"2"	"2"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"978.55914"	"1956.11101"	"1956.11158"	"-0.29"	"-0.00028"	"9/150"	"9"	"150"	"137864.853210449"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"98.4518"	"33738"	"33738"	"33727"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.1"	""	"7.5"	""	"6.9"	""	"9.3"	""	"11.9"	"9.5"	""	"932"	"60"	"36.000"	"29.000"	"4.26958748396852E-05"	"29"	"0"	"0.0001018"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MKEIAEAYLGK"	"[K].mkEIAEAYLGk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.71942"	"1956.14371"	"1956.14430"	"-0.30"	"-0.00020"	"9/104"	"9"	"104"	"5389192.43359375"	"HCD"	"MS2"	"5.540342"	"288.5"	"100.000"	"40.7312"	"11074"	"11074"	"11045"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.8"	""	"338.0"	""	"389.4"	""	"806.1"	"0.3"	"426.8"	"399.8"	""	"683"	"29"	"35.000"	"28.000"	"0.04289342326018"	"14"	"0.0001889"	"0.0004556"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MKEIAEAYLGK"	"[K].mkEIAEAYLGk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.71967"	"1956.14444"	"1956.14430"	"0.08"	"0.00005"	"10/104"	"10"	"104"	"5548709.65142822"	"HCD"	"MS2"	"0"	"317.5"	"100.000"	"40.9214"	"11196"	"11196"	"11165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"368.0"	""	"372.5"	""	"409.7"	""	"831.4"	"5.4"	"530.5"	"488.4"	""	"685"	"21"	"35.000"	"28.000"	"0.246979311620143"	"14"	"0.00252"	"0.03823"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTDGVNFYNILTK"	"[K].nTDGVNFYNILTk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"979.04260"	"1957.07793"	"1957.07950"	"-0.80"	"-0.00078"	"17/140"	"17"	"140"	"323354.653015137"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"66.6738"	"21678"	"21678"	"21651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.4"	""	"39.0"	""	"46.2"	""	"55.9"	"0.3"	"53.4"	"51.7"	""	"1084"	"56"	"37.000"	"30.000"	"0.000133967448659874"	"16"	"0"	"1.786E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTDGVNFYNILTK"	"[K].nTDGVNFYNILTk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"979.04449"	"1957.08171"	"1957.07950"	"1.13"	"0.00111"	"9/140"	"9"	"140"	"591458.108825684"	"HCD"	"MS2"	"0"	"53.0"	"100.000"	"66.6191"	"21603"	"21603"	"21577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.3"	""	"73.5"	""	"88.5"	""	"83.0"	""	"93.8"	"84.9"	""	"1053"	"56"	"37.000"	"30.000"	"0.000128646618599338"	"18"	"0"	"1.059E-05"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALTGLPFVTAPNK"	"[K].vAALTGLPFVTAPNk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"4"	"4"	"0.8125"	"0.0000"	"1"	"1"	"1"	"490.05188"	"1957.18569"	"1957.18865"	"-1.51"	"-0.00074"	"9/126"	"9"	"126"	"592921.519897461"	"HCD"	"MS2"	"7.749475"	"18.5"	"100.000"	"71.4207"	"23607"	"23607"	"23578"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.8"	""	"27.9"	""	"24.5"	""	"28.9"	""	"35.4"	"39.6"	""	"461"	"32"	"33.000"	"26.000"	"0.0142125147929072"	"20"	"0"	"2.75E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALTGLPFVTAPNK"	"[K].vAALTGLPFVTAPNk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"653.06744"	"1957.18778"	"1957.18865"	"-0.45"	"-0.00029"	"11/126"	"11"	"126"	"1356873.08258057"	"HCD"	"MS2"	"25.48286"	"39.4"	"100.000"	"71.1021"	"23425"	"23425"	"23395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.3"	""	"54.5"	""	"97.1"	""	"44.9"	""	"61.0"	"65.3"	""	"432"	"9"	"33.000"	"26.000"	"2.62091991700435"	"16"	"0.0001859"	"0.0003639"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALTGLPFVTAPNK"	"[K].vAALTGLPFVTAPNk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"653.06775"	"1957.18869"	"1957.18865"	"0.02"	"0.00001"	"13/126"	"13"	"126"	"1646691.24822998"	"HCD"	"MS2"	"9.068218"	"44.1"	"100.000"	"71.0637"	"23461"	"23461"	"23434"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.4"	""	"61.1"	""	"102.1"	""	"46.9"	"1.2"	"70.7"	"75.7"	""	"428"	"28"	"33.000"	"26.000"	"0.0327652716799955"	"14"	"0"	"0.0001431"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALTGLPFVTAPNK"	"[K].vAALTGLPFVTAPNk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"0.9821"	"0.0000"	"1"	"1"	"1"	"653.06775"	"1957.18869"	"1957.18865"	"0.02"	"0.00001"	"15/126"	"15"	"126"	"3918761.03509521"	"HCD"	"MS2"	"3.387727"	"83.8"	"100.000"	"71.3928"	"23543"	"23543"	"23523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.5"	""	"108.0"	""	"119.3"	""	"146.9"	""	"159.0"	"168.0"	""	"428"	"56"	"33.000"	"26.000"	"5.96229930086772E-05"	"17"	"0"	"1.483E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALTGLPFVTAPNK"	"[K].vAALTGLPFVTAPNk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"4"	"4"	"0.9259"	"0.0000"	"1"	"1"	"1"	"490.05273"	"1957.18911"	"1957.18865"	"0.23"	"0.00011"	"13/126"	"13"	"126"	"1490046.34326172"	"HCD"	"MS2"	"42.18933"	"31.7"	"100.000"	"71.3717"	"23535"	"23535"	"23507"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.2"	""	"42.4"	""	"46.9"	""	"49.8"	"1.6"	"58.5"	"59.8"	""	"429"	"54"	"33.000"	"26.000"	"8.08029648820484E-05"	"20"	"0"	"8.16E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALTGLPFVTAPNK"	"[K].vAALTGLPFVTAPNk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"979.09888"	"1957.19048"	"1957.18865"	"0.93"	"0.00091"	"14/126"	"14"	"126"	"230281.984802246"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"71.3280"	"23517"	"23517"	"23491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.2"	""	"19.9"	""	"15.5"	""	"27.0"	""	"24.0"	"29.2"	""	"428"	"45"	"33.000"	"26.000"	"0.000664375751859469"	"23"	"0"	"8.372E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAALTGLPFVTAPNK"	"[K].vAALTGLPFVTAPNk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"979.09906"	"1957.19084"	"1957.18865"	"1.12"	"0.00109"	"13/126"	"13"	"126"	"230072.781982422"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"71.2665"	"23544"	"23544"	"23514"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.1"	""	"16.3"	""	"20.3"	""	"21.2"	""	"28.8"	"27.6"	""	"426"	"49"	"33.000"	"26.000"	"0.000247388554747993"	"25"	"0"	"0.0001148"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVVGYALDYNEHFR"	"[K].fVVGYALDYNEHFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"653.67029"	"1958.99631"	"1958.99621"	"0.05"	"0.00003"	"17/118"	"17"	"118"	"6852857.35839844"	"HCD"	"MS2"	"82.76649"	"190.7"	"100.000"	"57.3436"	"17873"	"17873"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.0"	""	"267.5"	""	"275.9"	""	"281.2"	""	"338.8"	"366.1"	""	"987"	"15"	"36.000"	"29.000"	"1.53917200975036"	"13"	"0.0001308"	"0.0002672"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPIVESYIGFIESYR"	"[K].gPIVESYIGFIESYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"653.68451"	"1959.03897"	"1959.04249"	"-1.80"	"-0.00117"	"15/128"	"15"	"128"	"511694.819335938"	"HCD"	"MS2"	"5.68186"	"8.9"	"100.000"	"84.0775"	"28759"	"28759"	"28738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.7"	""	"11.6"	""	"17.7"	""	"9.4"	""	"13.3"	"20.9"	""	"1147"	"46"	"37.000"	"30.000"	"0.00129877351040462"	"24"	"0"	"6.491E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPIVESYIGFIESYR"	"[K].gPIVESYIGFIESYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"653.68512"	"1959.04081"	"1959.04249"	"-0.86"	"-0.00056"	"8/128"	"8"	"128"	"185324.697937012"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"84.3365"	"28814"	"28814"	"28785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.2"	""	"8.4"	""	"13.6"	""	"11.3"	""	"17.4"	"26.0"	""	"1193"	"14"	"37.000"	"30.000"	"2.17075319049879"	"13"	"0.0002277"	"0.001174"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPIVESYIGFIESYR"	"[K].gPIVESYIGFIESYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"653.68530"	"1959.04135"	"1959.04249"	"-0.58"	"-0.00038"	"12/128"	"12"	"128"	"556340.117858887"	"HCD"	"MS2"	"9.191069"	"10.0"	"100.000"	"84.0093"	"28680"	"28680"	"28660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.4"	""	"13.2"	""	"15.3"	""	"12.5"	""	"22.5"	"17.9"	""	"1184"	"44"	"37.000"	"30.000"	"0.00216931044191517"	"23"	"0"	"9.716E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDLLLEDLFGQK"	"[R].lPDLLLEDLFGQk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"Q64194"	"Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus OX=10116 GN=Lipa PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"653.72406"	"1959.15763"	"1959.15669"	"0.48"	"0.00031"	"11/108"	"11"	"108"	"170257.960571289"	"HCD"	"MS2"	"50.23779"	"3.0"	"100.000"	"102.6941"	"34767"	"34767"	"34763"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.9"	""	"3.8"	""	"3.5"	""	"5.2"	""	"7.0"	"5.4"	""	"654"	"40"	"35.000"	"28.000"	"0.00332313322568717"	"15"	"0.0001889"	"0.0004115"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.9444"	"0.0000"	"1"	"1"	"1"	"490.54651"	"1959.16421"	"1959.16792"	"-1.90"	"-0.00093"	"11/120"	"11"	"120"	"1669637.88671875"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"74.5729"	"24894"	"24894"	"24863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.2"	""	"69.7"	""	"39.2"	""	"53.3"	""	"58.3"	"56.3"	""	"611"	"36"	"34.000"	"27.000"	"0.00807255875361854"	"17"	"0"	"3.088E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"653.72638"	"1959.16458"	"1959.16792"	"-1.70"	"-0.00111"	"10/120"	"10"	"120"	"1663933.45324707"	"HCD"	"MS2"	"19.80252"	"52.1"	"100.000"	"74.3562"	"24805"	"24805"	"24783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.1"	""	"87.8"	""	"67.9"	""	"88.7"	"0.2"	"87.4"	"86.5"	""	"611"	"36"	"34.000"	"27.000"	"0.00706335793398644"	"15"	"0.0001859"	"0.0003176"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"980.08594"	"1959.16460"	"1959.16792"	"-1.69"	"-0.00166"	"8/120"	"8"	"120"	"493145.873657227"	"HCD"	"MS2"	"25.59792"	"30.5"	"100.000"	"74.6769"	"24936"	"24936"	"24911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.6"	""	"52.9"	""	"37.2"	""	"49.0"	""	"46.0"	"51.4"	""	"611"	"59"	"34.000"	"27.000"	"4.14010365473241E-05"	"24"	"0.0001859"	"0.0003356"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"653.72681"	"1959.16587"	"1959.16792"	"-1.05"	"-0.00068"	"10/120"	"10"	"120"	"1312759.29516602"	"HCD"	"MS2"	"36.93932"	"48.4"	"100.000"	"74.3079"	"24734"	"24734"	"24705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.0"	""	"70.8"	"2.9"	"64.9"	""	"85.7"	"0.3"	"78.8"	"78.6"	""	"595"	"30"	"34.000"	"27.000"	"0.0327707944588571"	"15"	"0.0001308"	"0.0002984"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8983"	"0.0000"	"1"	"1"	"1"	"653.72681"	"1959.16587"	"1959.16792"	"-1.05"	"-0.00068"	"8/120"	"8"	"120"	"7323972.96313477"	"HCD"	"MS2"	"11.5213"	"133.3"	"100.000"	"74.6562"	"24928"	"24928"	"24911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"236.1"	""	"238.4"	""	"150.5"	""	"233.2"	"1.5"	"206.2"	"193.5"	""	"595"	"59"	"34.000"	"27.000"	"3.46327493749621E-05"	"22"	"0"	"1.416E-05"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.9394"	"0.0000"	"1"	"1"	"1"	"490.54700"	"1959.16616"	"1959.16792"	"-0.90"	"-0.00044"	"11/120"	"11"	"120"	"1649542.02307129"	"HCD"	"MS2"	"5.633123"	"38.4"	"100.000"	"74.8268"	"24997"	"24997"	"24975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.9"	""	"62.9"	""	"49.0"	""	"64.5"	"0.8"	"61.5"	"60.7"	""	"595"	"33"	"34.000"	"27.000"	"0.0140438754775918"	"17"	"0.0001308"	"0.0002509"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.9302"	"0.0000"	"1"	"1"	"1"	"490.54721"	"1959.16701"	"1959.16792"	"-0.46"	"-0.00023"	"6/120"	"6"	"120"	"1592933.10601807"	"HCD"	"MS2"	"4.329119"	"34.7"	"100.000"	"74.5848"	"24847"	"24847"	"24817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.1"	""	"53.4"	""	"44.4"	""	"59.4"	""	"47.9"	"56.2"	""	"555"	"43"	"34.000"	"27.000"	"0.00130095713545311"	"19"	"0"	"3.754E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"980.08728"	"1959.16728"	"1959.16792"	"-0.32"	"-0.00032"	"9/120"	"9"	"120"	"332467.782104492"	"HCD"	"MS2"	"11.60833"	"24.4"	"100.000"	"74.8478"	"24954"	"24954"	"24929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.5"	""	"30.8"	""	"29.2"	""	"45.8"	"2.4"	"38.1"	"39.5"	""	"555"	"66"	"34.000"	"27.000"	"7.52078177849709E-06"	"22"	"0"	"0.0001119"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9403"	"0.0000"	"1"	"1"	"1"	"653.72754"	"1959.16806"	"1959.16792"	"0.07"	"0.00005"	"8/120"	"8"	"120"	"3459702.39666748"	"HCD"	"MS2"	"12.35153"	"77.9"	"100.000"	"74.9792"	"25059"	"25059"	"25039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.5"	""	"127.3"	""	"100.8"	""	"121.8"	"0.4"	"136.5"	"126.9"	""	"549"	"67"	"34.000"	"27.000"	"5.60457065811785E-06"	"21"	"0"	"3.398E-06"	"1.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"653.72766"	"1959.16843"	"1959.16792"	"0.26"	"0.00017"	"14/120"	"14"	"120"	"4279961.31726074"	"HCD"	"MS2"	"0.9943054"	"99.2"	"100.000"	"74.9101"	"24979"	"24979"	"24961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.5"	""	"170.9"	""	"118.6"	""	"166.2"	""	"158.8"	"149.7"	""	"549"	"35"	"34.000"	"27.000"	"0.00969487801078921"	"19"	"0"	"3.111E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8814"	"0.0000"	"1"	"1"	"1"	"653.72772"	"1959.16861"	"1959.16792"	"0.35"	"0.00023"	"8/120"	"8"	"120"	"6577454.38018799"	"HCD"	"MS2"	"9.086441"	"128.4"	"100.000"	"74.5963"	"24851"	"24851"	"24833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.1"	""	"232.5"	""	"149.7"	""	"211.9"	""	"197.1"	"186.4"	""	"555"	"59"	"34.000"	"27.000"	"3.28294031713733E-05"	"24"	"0"	"7.165E-06"	"1.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQSIYNLLPQK"	"[K].lSPQSIYNLLPQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"980.08826"	"1959.16924"	"1959.16792"	"0.67"	"0.00066"	"9/120"	"9"	"120"	"302631.642456055"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"74.5364"	"24827"	"24827"	"24801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.0"	""	"35.8"	""	"25.9"	""	"37.2"	"1.5"	"37.2"	"31.5"	""	"549"	"63"	"34.000"	"27.000"	"1.37575895630686E-05"	"20"	"0.0001859"	"0.0003185"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVVGYALDYNEHFR"	"[K].fVVGYALDYnEHFR.[D]"	"N-Term(TMT6plex); N10(Deamidated)"	"1"	"1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"P27605"	"Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Hprt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.00543"	"1960.00174"	"1959.98023"	"10.98"	"0.00717"	"16/118"	"16"	"118"	"6239697.30969238"	"HCD"	"MS2"	"62.04367"	"185.0"	"100.000"	"57.1285"	"17731"	"17731"	"17707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"269.0"	""	"248.5"	""	"256.6"	""	"258.3"	""	"344.1"	"377.6"	""	"1056"	"9"	"37.000"	"30.000"	"6.18919153009413"	"13"	"0.001966"	"0.03008"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISPLLKDPDSFR"	"[R].dISPLLkDPDSFR.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.37500"	"1961.11045"	"1961.11080"	"-0.18"	"-0.00012"	"7/128"	"7"	"128"	"6232487.48266602"	"HCD"	"MS2"	"9.594581"	"285.3"	"100.000"	"51.7598"	"15557"	"15557"	"15538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"535.8"	""	"465.2"	""	"464.6"	""	"385.0"	"2.3"	"416.4"	"422.7"	""	"984"	"7"	"36.000"	"29.000"	"8.89129669997376"	"13"	"0.0001889"	"0.0004798"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISPLLKDPDSFR"	"[R].dISPLLkDPDSFR.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.37524"	"1961.11118"	"1961.11080"	"0.19"	"0.00013"	"10/128"	"10"	"128"	"18990294.3898926"	"HCD"	"MS2"	"5.512409"	"854.7"	"100.000"	"51.6515"	"15563"	"15563"	"15542"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1835.3"	""	"1488.0"	""	"1429.7"	""	"1161.2"	"5.2"	"1041.7"	"1084.3"	""	"982"	"20"	"36.000"	"29.000"	"0.446767416862436"	"14"	"0"	"6.895E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISPLLKDPDSFR"	"[R].dISPLLkDPDSFR.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.37531"	"1961.11136"	"1961.11080"	"0.29"	"0.00019"	"9/128"	"9"	"128"	"13291356.8349609"	"HCD"	"MS2"	"0"	"655.3"	"100.000"	"51.4496"	"15430"	"15430"	"15410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1322.7"	""	"1140.1"	""	"1158.5"	""	"885.3"	""	"840.5"	"833.2"	""	"993"	"8"	"36.000"	"29.000"	"8.08945480205622"	"13"	"0.0001889"	"0.0006523"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAADLMSLKPK"	"[R].aEAADLMSLkPk.[L]"	"N-Term(TMT6plex); K10(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"654.39551"	"1961.17197"	"1961.17085"	"0.57"	"0.00038"	"9/104"	"9"	"104"	"4790752.6439209"	"HCD"	"MS2"	"14.98661"	"319.2"	"100.000"	"47.8366"	"14010"	"14010"	"13986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"483.5"	""	"459.2"	""	"506.5"	""	"363.0"	"2.1"	"550.7"	"657.9"	""	"598"	"33"	"34.000"	"27.000"	"0.0135728543378411"	"17"	"0"	"4.909E-06"	"1.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPIYNLIPLTMK"	"[K].lSPIYNLIPLTMk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"981.09760"	"1961.18791"	"1961.19096"	"-1.55"	"-0.00152"	"8/128"	"8"	"128"	"93959.2397460938"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"86.3183"	"29666"	"29666"	"29638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.0"	""	"6.9"	""	"8.1"	""	"6.6"	""	"8.3"	"8.6"	""	"524"	"28"	"34.000"	"27.000"	"0.0374370217129909"	"14"	"0.0006396"	"0.006224"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPIYNLIPLTMK"	"[K].lSPIYNLIPLTMk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"981.09814"	"1961.18901"	"1961.19096"	"-0.99"	"-0.00098"	"6/128"	"6"	"128"	"80867.7005615234"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"86.2733"	"29595"	"29595"	"29569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"10.6"	""	"8.7"	""	"6.6"	""	"8.1"	"7.5"	""	"507"	"33"	"34.000"	"27.000"	"0.0117754622268967"	"16"	"0.0008731"	"0.00911"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPIYNLIPLTMK"	"[K].lSPIYNLIPLTMk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"654.40143"	"1961.18973"	"1961.19096"	"-0.63"	"-0.00041"	"12/128"	"12"	"128"	"1109380.39007568"	"HCD"	"MS2"	"6.578224"	"28.7"	"100.000"	"86.3922"	"29696"	"29696"	"29684"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.8"	""	"45.2"	""	"43.2"	""	"30.1"	""	"48.8"	"54.2"	""	"498"	"42"	"33.000"	"26.000"	"0.00175873071011478"	"21"	"0"	"5.149E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPIYNLIPLTMK"	"[K].lSPIYNLIPLTMk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"654.40186"	"1961.19101"	"1961.19096"	"0.03"	"0.00002"	"12/128"	"12"	"128"	"1206577.71478271"	"HCD"	"MS2"	"12.74196"	"33.4"	"100.000"	"86.2206"	"29573"	"29573"	"29553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.3"	""	"52.3"	""	"45.2"	""	"40.8"	"0.7"	"57.9"	"58.5"	""	"491"	"30"	"33.000"	"26.000"	"0.0264272209946125"	"15"	"0"	"3.878E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].gTFAHLSELHcDk.[L]"	"N-Term(TMT6plex); C11(Methylthio); K13(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"981.50092"	"1961.99455"	"1961.99776"	"-1.63"	"-0.00160"	"10/116"	"10"	"116"	"460990.395629883"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"41.3066"	"11310"	"11310"	"11285"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.9"	""	"36.0"	""	"47.1"	""	"78.4"	""	"104.0"	"93.8"	""	"1084"	"22"	"37.000"	"30.000"	"0.31405035346337"	"14"	"0.0001889"	"0.0009814"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].gTFAHLSELHcDk.[L]"	"N-Term(TMT6plex); C11(Methylthio); K13(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.25415"	"1961.99477"	"1961.99776"	"-1.52"	"-0.00075"	"16/116"	"16"	"116"	"83868703.6494141"	"HCD"	"MS2"	"10.43841"	"738.5"	"47.423"	"41.1028"	"11226"	"11226"	"11205"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"737.1"	""	"667.5"	""	"741.7"	""	"1575.8"	"17.3"	"1641.0"	"1646.5"	""	"1079"	"43"	"37.000"	"30.000"	"0.00245466058450951"	"15"	"0"	"1.878E-06"	"1.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].gTFAHLSELHcDk.[L]"	"N-Term(TMT6plex); C11(Methylthio); K13(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.9778"	"0.0000"	"1"	"1"	"1"	"491.25430"	"1961.99538"	"1961.99776"	"-1.21"	"-0.00059"	"13/116"	"13"	"116"	"165346941.731445"	"HCD"	"MS2"	"2.920685"	"429.6"	"12.695"	"41.3594"	"11375"	"11375"	"11357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"444.4"	""	"400.2"	""	"445.4"	""	"879.8"	"9.2"	"950.6"	"957.6"	""	"1094"	"45"	"37.000"	"30.000"	"0.00158850039199206"	"16"	"0"	"4.407E-06"	"1.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].gTFAHLSELHcDk.[L]"	"N-Term(TMT6plex); C11(Methylthio); K13(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.66998"	"1961.99540"	"1961.99776"	"-1.20"	"-0.00079"	"14/116"	"14"	"116"	"23793484.3708496"	"HCD"	"MS2"	"2.63135"	"396.4"	"51.648"	"41.4763"	"11423"	"11423"	"11405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"384.2"	""	"357.7"	""	"401.3"	""	"807.0"	""	"948.1"	"881.5"	""	"1094"	"37"	"37.000"	"30.000"	"0.0115874354098093"	"15"	"0"	"1.73E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].gTFAHLSELHcDk.[L]"	"N-Term(TMT6plex); C11(Methylthio); K13(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"981.50140"	"1961.99553"	"1961.99776"	"-1.14"	"-0.00111"	"7/116"	"7"	"116"	"131081.732971191"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"41.6688"	"11502"	"11502"	"11474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.5"	""	"8.3"	""	"10.9"	""	"15.8"	""	"28.4"	"27.4"	""	"1081"	"36"	"37.000"	"30.000"	"0.0124106834430473"	"19"	"0.0002723"	"0.001363"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].gTFAHLSELHcDk.[L]"	"N-Term(TMT6plex); C11(Methylthio); K13(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.67017"	"1961.99594"	"1961.99776"	"-0.92"	"-0.00060"	"8/116"	"8"	"116"	"24672638.2893066"	"HCD"	"MS2"	"0"	"377.3"	"47.531"	"41.1788"	"11257"	"11257"	"11237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"374.3"	""	"345.0"	""	"372.9"	""	"763.2"	"6.1"	"890.0"	"841.1"	""	"1088"	"39"	"37.000"	"30.000"	"0.00634744431681164"	"15"	"0"	"9.194E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].gTFAHLSELHcDk.[L]"	"N-Term(TMT6plex); C11(Methylthio); K13(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.25446"	"1961.99599"	"1961.99776"	"-0.90"	"-0.00044"	"15/116"	"15"	"116"	"225641293.957031"	"HCD"	"MS2"	"3.938851"	"207.4"	"4.483"	"41.3846"	"11342"	"11342"	"11328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.2"	""	"186.5"	""	"209.7"	""	"416.8"	"4.6"	"469.8"	"493.2"	""	"1088"	"41"	"37.000"	"30.000"	"0.00454568041917799"	"15"	"0"	"2.31E-06"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].gTFAHLSELHcDk.[L]"	"N-Term(TMT6plex); C11(Methylthio); K13(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.67041"	"1961.99668"	"1961.99776"	"-0.55"	"-0.00036"	"9/116"	"9"	"116"	"4006935.63433838"	"HCD"	"MS2"	"31.19199"	"207.9"	"100.000"	"41.7811"	"11548"	"11548"	"11522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"288.4"	""	"253.3"	""	"272.9"	""	"337.9"	"4.6"	"414.8"	"400.2"	""	"1091"	"43"	"37.000"	"30.000"	"0.0028694241881613"	"15"	"0"	"2.178E-06"	"1.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].gTFAHLSELHcDk.[L]"	"N-Term(TMT6plex); C11(Methylthio); K13(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.9730"	"0.0000"	"1"	"1"	"1"	"491.25464"	"1961.99672"	"1961.99776"	"-0.53"	"-0.00026"	"15/116"	"15"	"116"	"218649634.349609"	"HCD"	"MS2"	"3.789823"	"193.1"	"4.382"	"41.6459"	"11492"	"11492"	"11474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.9"	""	"160.1"	""	"201.0"	""	"385.2"	"5.0"	"438.8"	"466.0"	""	"1087"	"37"	"37.000"	"30.000"	"0.0119729053266956"	"16"	"0"	"2.159E-06"	"1.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGNTGGMLDNILASK"	"[K].iGNTGGMLDNILASk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"981.55524"	"1962.10320"	"1962.10942"	"-3.17"	"-0.00311"	"6/156"	"6"	"156"	"139060.226806641"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"69.1891"	"22696"	"22696"	"22666"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.2"	""	"16.5"	""	"17.9"	""	"17.3"	"2.2"	"24.3"	"24.0"	""	"1173"	"13"	"37.000"	"30.000"	"3.09933140166144"	"14"	"0.002424"	"0.03569"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGNTGGMLDNILASK"	"[K].iGNTGGMLDNILASk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"654.70697"	"1962.10636"	"1962.10942"	"-1.56"	"-0.00102"	"9/156"	"9"	"156"	"1865474.00317383"	"HCD"	"MS2"	"41.61042"	"62.0"	"100.000"	"68.9494"	"22598"	"22598"	"22570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.1"	""	"74.2"	""	"79.6"	""	"85.7"	""	"111.4"	"125.3"	""	"1135"	"40"	"37.000"	"30.000"	"0.00518759264534367"	"21"	"0"	"9.488E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGNTGGMLDNILASK"	"[K].iGNTGGMLDNILASk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"981.55713"	"1962.10698"	"1962.10942"	"-1.24"	"-0.00122"	"13/156"	"13"	"156"	"167549.279663086"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"69.3152"	"22696"	"22696"	"22666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.2"	""	"17.5"	""	"24.1"	""	"17.3"	""	"33.6"	"34.8"	""	"1158"	"49"	"37.000"	"30.000"	"0.000683405648042351"	"16"	"0.0001859"	"0.0003523"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGNTGGMLDNILASK"	"[K].iGNTGGMLDNILASk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"654.70789"	"1962.10910"	"1962.10942"	"-0.16"	"-0.00010"	"15/156"	"15"	"156"	"3080734.46203613"	"HCD"	"MS2"	"5.800691"	"95.1"	"100.000"	"69.2231"	"22658"	"22658"	"22634"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.8"	""	"109.3"	""	"135.4"	""	"109.2"	""	"175.3"	"194.4"	""	"1141"	"48"	"37.000"	"30.000"	"0.00087751722229288"	"21"	"0"	"6.98E-06"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAMAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"981.57764"	"1962.14800"	"1962.14983"	"-0.93"	"-0.00091"	"11/122"	"11"	"122"	"278250.987976074"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"63.0340"	"20192"	"20192"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.5"	""	"33.9"	""	"28.1"	""	"29.7"	""	"42.1"	"55.1"	""	"847"	"36"	"36.000"	"29.000"	"0.00961287764772799"	"15"	"0.0003839"	"0.001698"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAMAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"654.72156"	"1962.15012"	"1962.14983"	"0.15"	"0.00010"	"12/122"	"12"	"122"	"4738839.72772217"	"HCD"	"MS2"	"15.77784"	"103.0"	"100.000"	"62.9250"	"20094"	"20094"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.0"	""	"144.5"	""	"144.0"	""	"131.4"	"0.5"	"193.6"	"211.7"	""	"816"	"43"	"36.000"	"29.000"	"0.00202609667151737"	"16"	"0"	"5.168E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAMAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"981.57886"	"1962.15044"	"1962.14983"	"0.31"	"0.00031"	"11/122"	"11"	"122"	"1871873.14215088"	"HCD"	"MS2"	"0"	"111.1"	"100.000"	"62.7045"	"20057"	"20057"	"20035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.2"	""	"168.8"	""	"156.9"	""	"135.5"	""	"210.4"	"220.4"	""	"803"	"56"	"36.000"	"29.000"	"0.000105120047779992"	"18"	"0"	"2.452E-05"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAMAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"981.57904"	"1962.15080"	"1962.14983"	"0.50"	"0.00049"	"10/122"	"10"	"122"	"576542.244140625"	"HCD"	"MS2"	"8.500381"	"40.0"	"100.000"	"62.8903"	"20080"	"20080"	"20057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.8"	""	"55.4"	""	"58.8"	""	"48.3"	"0.1"	"79.4"	"83.0"	""	"815"	"34"	"36.000"	"29.000"	"0.0176249386146766"	"15"	"0.0003146"	"0.001442"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAMAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"3"	"3"	"0.8939"	"0.0000"	"1"	"1"	"1"	"654.72180"	"1962.15085"	"1962.14983"	"0.52"	"0.00034"	"15/122"	"15"	"122"	"14659839.4066162"	"HCD"	"MS2"	"21.71772"	"311.7"	"100.000"	"62.6907"	"20052"	"20052"	"20035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"518.2"	""	"470.6"	""	"447.6"	""	"379.2"	"3.7"	"562.2"	"569.3"	""	"817"	"66"	"36.000"	"29.000"	"9.55415011992346E-06"	"24"	"0"	"5.793E-06"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAMAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"654.72180"	"1962.15085"	"1962.14983"	"0.52"	"0.00034"	"12/122"	"12"	"122"	"14092426.5557861"	"HCD"	"MS2"	"4.959456"	"325.6"	"100.000"	"62.6044"	"19963"	"19963"	"19945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"494.2"	""	"479.9"	""	"465.7"	""	"409.6"	""	"594.7"	"645.7"	""	"817"	"48"	"36.000"	"29.000"	"0.000696934655907776"	"17"	"0"	"2.282E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAMAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"981.58032"	"1962.15337"	"1962.14983"	"1.81"	"0.00177"	"11/122"	"11"	"122"	"1271575.80993652"	"HCD"	"MS2"	"0"	"77.6"	"100.000"	"62.5860"	"19956"	"19956"	"19929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.9"	""	"127.7"	""	"109.8"	""	"92.0"	""	"135.5"	"155.8"	""	"804"	"50"	"36.000"	"29.000"	"0.000387459267496836"	"18"	"0"	"0.0001227"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLLEALLPGQPEAVAR"	"[R].vGLLEALLPGQPEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.72333"	"1962.15543"	"1962.15853"	"-1.58"	"-0.00103"	"13/156"	"13"	"156"	"1873099.45526123"	"HCD"	"MS2"	"25.33933"	"15.7"	"100.000"	"81.2276"	"27546"	"27546"	"27520"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.6"	""	"19.4"	""	"19.6"	""	"30.3"	""	"31.4"	"27.7"	""	"772"	"15"	"35.000"	"28.000"	"1.09291731037856"	"13"	"0"	"7.54E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLLEALLPGQPEAVAR"	"[R].vGLLEALLPGQPEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"654.72357"	"1962.15616"	"1962.15853"	"-1.21"	"-0.00079"	"7/156"	"7"	"156"	"908723.683349609"	"HCD"	"MS2"	"37.29671"	"12.2"	"100.000"	"81.1418"	"27562"	"27562"	"27534"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"12.3"	""	"17.0"	""	"23.4"	""	"29.6"	"20.3"	""	"778"	"7"	"35.000"	"28.000"	"8.18369813069159"	"17"	"0.0001889"	"0.0005246"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLLEALLPGQPEAVAR"	"[R].vGLLEALLPGQPEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"654.72424"	"1962.15818"	"1962.15853"	"-0.18"	"-0.00012"	"17/156"	"17"	"156"	"1594440.98852539"	"HCD"	"MS2"	"8.570112"	"11.4"	"100.000"	"81.4283"	"27679"	"27679"	"27662"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.9"	""	"14.9"	""	"14.2"	""	"19.0"	""	"28.7"	"18.0"	""	"767"	"42"	"35.000"	"28.000"	"0.00228436432043375"	"17"	"0"	"9.746E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLLEALLPGQPEAVAR"	"[R].vGLLEALLPGQPEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.72430"	"1962.15836"	"1962.15853"	"-0.09"	"-0.00006"	"15/156"	"15"	"156"	"807924.386779785"	"HCD"	"MS2"	"36.81517"	"12.0"	"100.000"	"81.5623"	"27682"	"27682"	"27664"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.6"	""	"18.8"	""	"17.2"	""	"19.4"	""	"22.6"	"23.6"	""	"769"	"29"	"35.000"	"28.000"	"0.0444525157122861"	"14"	"0"	"2.512E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLLEALLPGQPEAVAR"	"[R].vGLLEALLPGQPEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"P46413"	"Glutathione synthetase OS=Rattus norvegicus OX=10116 GN=Gss PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"981.58282"	"1962.15837"	"1962.15853"	"-0.08"	"-0.00008"	"4/156"	"4"	"156"	"79375.8494262695"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"81.3890"	"27612"	"27612"	"27584"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.7"	""	"7.1"	""	"4.7"	""	"5.3"	""	"4.2"	"5.7"	""	"769"	"13"	"35.000"	"28.000"	"2.15722946784485"	"13"	"0.001007"	"0.01109"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQIASPFLEPHLVR"	"[K].lLQIASPFLEPHLVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.72900"	"1962.17246"	"1962.17378"	"-0.68"	"-0.00044"	"17/144"	"17"	"144"	"1318584.33154297"	"HCD"	"MS2"	"38.57088"	"19.9"	"100.000"	"73.0183"	"24208"	"24208"	"24177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.0"	""	"21.8"	""	"30.9"	""	"30.7"	""	"41.0"	"38.4"	""	"641"	"30"	"35.000"	"28.000"	"0.029842007408744"	"14"	"0"	"2.015E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQIASPFLEPHLVR"	"[K].lLQIASPFLEPHLVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.72931"	"1962.17337"	"1962.17378"	"-0.21"	"-0.00014"	"18/144"	"18"	"144"	"1656650.16650391"	"HCD"	"MS2"	"44.31394"	"18.3"	"100.000"	"73.0695"	"24280"	"24280"	"24255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.9"	""	"25.1"	""	"25.7"	""	"27.8"	""	"31.0"	"36.7"	""	"619"	"34"	"34.000"	"27.000"	"0.0129915405545217"	"15"	"0"	"8.547E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNSFIQVEAPEQK"	"[R].lnSFIqVEAPEqk.[G]"	"N-Term(TMT6plex); N2(Deamidated); Q6(Deamidated); Q12(Deamidated); K13(TMT6plex)"	"1"	"1"	"P70478"	"Adenomatous polyposis coli protein OS=Rattus norvegicus OX=10116 GN=Apc PE=1 SV=1"	"P70478"	"Adenomatous polyposis coli protein OS=Rattus norvegicus OX=10116 GN=Apc PE=1 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"655.35846"	"1964.06083"	"1964.06285"	"-1.03"	"-0.00067"	"4/134"	"4"	"134"	"445564.881408691"	"HCD"	"MS2"	"27.50505"	"13.8"	"100.000"	"84.4677"	"28867"	"28867"	"28844"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.9"	""	"14.6"	""	"20.9"	""	"20.5"	""	"24.4"	"39.3"	""	"1298"	"13"	"38.000"	"31.000"	"3.12064737143874"	"18"	"0.000494"	"0.002749"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLVPFVDAFQLER"	"[R].lTSLVPFVDAFQLER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"982.55493"	"1964.10259"	"1964.10543"	"-1.45"	"-0.00142"	"4/142"	"4"	"142"	"120775.537109375"	"HCD"	"MS2"	"0"	"2.4"	"100.000"	"94.5233"	"32599"	"32599"	"32596"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.6"	""	"2.7"	""	"3.0"	""	"5.2"	""	"2.7"	"6.0"	""	"1154"	"8"	"37.000"	"30.000"	"9.57581645591473"	"13"	"0.00274"	"0.04374"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLVPFVDAFQLER"	"[R].lTSLVPFVDAFQLER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"655.37256"	"1964.10312"	"1964.10543"	"-1.17"	"-0.00077"	"8/142"	"8"	"142"	"195216.305175781"	"HCD"	"MS2"	"4.236075"	"5.1"	"100.000"	"94.3466"	"32520"	"32520"	"32516"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"4.5"	""	"9.1"	""	"10.8"	""	"9.4"	"7.8"	""	"1146"	"25"	"37.000"	"30.000"	"0.164874929164354"	"20"	"0.0001308"	"0.0002192"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLVPFVDAFQLER"	"[R].lTSLVPFVDAFQLER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"982.55524"	"1964.10320"	"1964.10543"	"-1.14"	"-0.00112"	"6/142"	"6"	"142"	"81288.9152832031"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"94.7804"	"32677"	"32677"	"32671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.2"	""	"4.3"	""	"4.8"	""	"5.8"	""	"4.1"	"3.6"	""	"1148"	"13"	"37.000"	"30.000"	"2.66631767977859"	"17"	"0.00103"	"0.01173"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLVPFVDAFQLER"	"[R].lTSLVPFVDAFQLER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"0.6571"	"0.0000"	"1"	"1"	"1"	"655.37274"	"1964.10367"	"1964.10543"	"-0.89"	"-0.00059"	"11/142"	"11"	"142"	"310842.75793457"	"HCD"	"MS2"	"4.831951"	"4.7"	"100.000"	"94.7781"	"32676"	"32676"	"32671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.0"	""	"5.5"	""	"9.4"	""	"11.5"	""	"8.7"	"6.3"	""	"1146"	"35"	"37.000"	"30.000"	"0.0181198509927648"	"27"	"7.476E-05"	"0.0001961"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLVPFVDAFQLER"	"[R].lTSLVPFVDAFQLER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"982.55597"	"1964.10466"	"1964.10543"	"-0.39"	"-0.00038"	"5/142"	"5"	"142"	"121375.883544922"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"94.6178"	"32609"	"32609"	"32604"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"8.4"	""	"5.8"	""	"10.1"	""	"4.6"	"11.7"	""	"1103"	"13"	"37.000"	"30.000"	"2.74502002365883"	"13"	"0.0006037"	"0.00388"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLVPFVDAFQLER"	"[R].lTSLVPFVDAFQLER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"655.37317"	"1964.10495"	"1964.10543"	"-0.24"	"-0.00016"	"10/142"	"10"	"142"	"489350.278015137"	"HCD"	"MS2"	"5.198152"	"6.1"	"100.000"	"94.6060"	"32605"	"32605"	"32601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"9.6"	""	"10.0"	""	"6.9"	""	"9.9"	"14.6"	""	"1107"	"46"	"37.000"	"30.000"	"0.00140319369698059"	"19"	"0"	"4.043E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLVPFVDAFQLER"	"[R].lTSLVPFVDAFQLER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"655.37323"	"1964.10514"	"1964.10543"	"-0.15"	"-0.00010"	"12/142"	"12"	"142"	"173941.258056641"	"HCD"	"MS2"	"11.90219"	"4.1"	"100.000"	"94.5027"	"32594"	"32594"	"32590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.0"	""	"3.4"	""	"4.7"	""	"7.4"	""	"6.4"	"12.7"	""	"1106"	"34"	"37.000"	"30.000"	"0.0217633191727045"	"18"	"0"	"0.0001498"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLVPFVDAFQLER"	"[R].lTSLVPFVDAFQLER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"982.55627"	"1964.10527"	"1964.10543"	"-0.08"	"-0.00008"	"4/142"	"4"	"142"	"130412.588439941"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"94.3608"	"32525"	"32525"	"32518"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"1.4"	""	"4.1"	""	"4.8"	""	"5.3"	"4.0"	""	"1101"	"12"	"37.000"	"30.000"	"3.86151141780194"	"16"	"0.00103"	"0.01168"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPNPDFFEDLEPFR"	"[K].iPNPDFFEDLEPFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"983.00018"	"1964.99309"	"1964.99554"	"-1.25"	"-0.00123"	"4/138"	"4"	"138"	"109075.629150391"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"86.9406"	"29866"	"29866"	"29838"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"5.0"	""	"6.0"	""	"6.2"	""	"8.8"	"7.2"	""	"1020"	"10"	"37.000"	"30.000"	"4.84808444764704"	"13"	"0.002711"	"0.04044"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPNPDFFEDLEPFR"	"[K].iPNPDFFEDLEPFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"983.00067"	"1964.99407"	"1964.99554"	"-0.75"	"-0.00074"	"4/138"	"4"	"138"	"78725.4478759766"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"86.9993"	"29941"	"29941"	"29922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	"4.4"	""	""	""	"4.4"	""	"5.5"	"7.9"	""	"1022"	"13"	"37.000"	"30.000"	"2.2930889425583"	"14"	"0.001966"	"0.02818"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPNPDFFEDLEPFR"	"[K].iPNPDFFEDLEPFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.67047"	"1964.99686"	"1964.99554"	"0.67"	"0.00044"	"6/138"	"6"	"138"	"369518.649719238"	"HCD"	"MS2"	"5.480921"	"14.5"	"100.000"	"87.0355"	"29904"	"29904"	"29884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.8"	""	"19.1"	""	"23.4"	""	"26.5"	""	"26.8"	"25.1"	""	"1030"	"12"	"37.000"	"30.000"	"2.916132338547"	"13"	"0.0003839"	"0.001987"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSITDVVPYPISLR"	"[R].eFSITDVVPYPISLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.70087"	"1965.08805"	"1965.08944"	"-0.71"	"-0.00047"	"7/136"	"7"	"136"	"2947653.92547607"	"HCD"	"MS2"	"44.18357"	"58.0"	"100.000"	"81.9822"	"27904"	"27904"	"27886"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.0"	""	"110.2"	""	"90.9"	""	"61.1"	""	"98.7"	"89.5"	""	"1211"	"39"	"37.000"	"30.000"	"0.00839680654381929"	"15"	"0"	"9.623E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSITDVVPYPISLR"	"[R].eFSITDVVPYPISLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.70093"	"1965.08823"	"1965.08944"	"-0.62"	"-0.00040"	"7/136"	"7"	"136"	"2460985.13226318"	"HCD"	"MS2"	"28.83892"	"54.5"	"100.000"	"81.9547"	"27842"	"27842"	"27824"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.6"	""	"91.5"	""	"87.9"	""	"76.1"	"1.5"	"86.4"	"89.1"	""	"1211"	"40"	"37.000"	"30.000"	"0.0064731272936932"	"15"	"0"	"3.501E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSITDVVPYPISLR"	"[R].eFSITDVVPYPISLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"983.04779"	"1965.08830"	"1965.08944"	"-0.58"	"-0.00057"	"12/136"	"12"	"136"	"324421.585510254"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"81.9294"	"27832"	"27832"	"27808"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.5"	""	"28.2"	""	"24.3"	""	"21.2"	""	"23.3"	"25.6"	""	"1181"	"61"	"37.000"	"30.000"	"4.22882683730719E-05"	"28"	"0"	"4.507E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSITDVVPYPISLR"	"[R].eFSITDVVPYPISLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"983.04791"	"1965.08855"	"1965.08944"	"-0.46"	"-0.00045"	"10/136"	"10"	"136"	"362661.292358398"	"HCD"	"MS2"	"0"	"18.7"	"100.000"	"81.9499"	"27891"	"27891"	"27870"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.6"	""	"33.0"	""	"34.8"	""	"28.7"	""	"23.5"	"32.3"	""	"1170"	"35"	"37.000"	"30.000"	"0.0204717922711589"	"17"	"0.0001308"	"0.0002486"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSITDVVPYPISLR"	"[R].eFSITDVVPYPISLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"983.04840"	"1965.08953"	"1965.08944"	"0.04"	"0.00004"	"6/136"	"6"	"136"	"80407.477355957"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"82.2457"	"27961"	"27961"	"27936"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"4.9"	""	"7.3"	""	"6.2"	""	"9.1"	"8.5"	""	"1177"	"2"	"37.000"	"30.000"	"35.4606316404759"	"13"	"0.002953"	"0.05309"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQTLEIDLDSMK"	"[R].tLQTLEIDLDSMk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"655.70325"	"1965.09519"	"1965.09785"	"-1.35"	"-0.00089"	"15/136"	"15"	"136"	"1678612.68225098"	"HCD"	"MS2"	"9.45329"	"55.3"	"100.000"	"76.3330"	"25555"	"25555"	"25537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.1"	""	"65.0"	""	"79.4"	""	"57.5"	"0.1"	"94.7"	"130.8"	""	"1171"	"48"	"37.000"	"30.000"	"0.000892332887348314"	"22"	"0"	"2.52E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQTLEIDLDSMK"	"[R].tLQTLEIDLDSMk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"983.05170"	"1965.09612"	"1965.09785"	"-0.88"	"-0.00087"	"6/136"	"6"	"136"	"294594.093017578"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"76.2162"	"25559"	"25559"	"25535"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.9"	""	"33.4"	""	"43.1"	""	"23.3"	""	"41.2"	"76.9"	""	"1157"	"34"	"37.000"	"30.000"	"0.021443879755122"	"17"	"0"	"0.0001047"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQTLEIDLDSMK"	"[R].tLQTLEIDLDSMk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"655.70392"	"1965.09720"	"1965.09785"	"-0.33"	"-0.00022"	"12/136"	"12"	"136"	"537537.953125"	"HCD"	"MS2"	"10.20053"	"30.8"	"100.000"	"76.4165"	"25640"	"25640"	"25615"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.6"	""	"40.8"	""	"39.1"	""	"42.1"	"1.4"	"56.9"	"68.0"	""	"1164"	"24"	"37.000"	"30.000"	"0.251144102713759"	"20"	"0.0001308"	"0.0002577"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQILMPNIGYGSNK"	"[K].gQILmPNIGYGSNk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K14(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"656.03210"	"1966.08176"	"1966.08320"	"-0.73"	"-0.00048"	"13/128"	"13"	"128"	"1432303.38183594"	"HCD"	"MS2"	"0"	"78.5"	"100.000"	"43.8457"	"12335"	"12335"	"12316"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.1"	""	"101.6"	""	"114.9"	""	"138.1"	""	"137.0"	"140.2"	""	"1199"	"31"	"37.000"	"30.000"	"0.0458975165843298"	"18"	"0"	"0.0001036"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVEALNSLTGEFK"	"[K].lSVEALNSLTGEFk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"983.56152"	"1966.11577"	"1966.12611"	"-5.26"	"-0.00517"	"9/138"	"9"	"138"	"259613.382202148"	"HCD"	"MS2"	"16.57452"	"23.5"	"100.000"	"76.2330"	"25515"	"25515"	"25489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.0"	""	"25.9"	""	"26.6"	""	"17.3"	""	"32.9"	"83.7"	""	"981"	"6"	"36.000"	"29.000"	"11.4192876188469"	"17"	"0.003571"	"0.08281"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVEALNSLTGEFK"	"[K].lSVEALNSLTGEFk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"656.04663"	"1966.12534"	"1966.12611"	"-0.39"	"-0.00026"	"14/138"	"14"	"138"	"3183338.80566406"	"HCD"	"MS2"	"39.13469"	"83.9"	"100.000"	"75.9253"	"25445"	"25445"	"25423"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.6"	""	"63.0"	""	"67.8"	""	"60.9"	"0.1"	"62.1"	"388.1"	""	"915"	"63"	"36.000"	"29.000"	"2.46826109800671E-05"	"23"	"0"	"9.479E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVEALNSLTGEFK"	"[K].lSVEALNSLTGEFk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8657"	"0.0000"	"1"	"1"	"1"	"983.56635"	"1966.12541"	"1966.12611"	"-0.36"	"-0.00035"	"17/138"	"17"	"138"	"424052.209106445"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"76.0092"	"25475"	"25475"	"25455"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.9"	""	"23.4"	""	"23.2"	""	"26.6"	""	"19.5"	"210.9"	""	"917"	"67"	"36.000"	"29.000"	"9.4697680143913E-06"	"26"	"0"	"2.809E-06"	"1.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVEALNSLTGEFK"	"[K].lSVEALNSLTGEFk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"656.04675"	"1966.12571"	"1966.12611"	"-0.21"	"-0.00014"	"12/138"	"12"	"138"	"2591635.8848877"	"HCD"	"MS2"	"16.6113"	"77.3"	"100.000"	"75.9791"	"25415"	"25415"	"25393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.5"	""	"60.0"	""	"58.6"	""	"48.8"	""	"48.2"	"394.6"	""	"918"	"52"	"36.000"	"29.000"	"0.000305360378696599"	"25"	"0"	"4.453E-06"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVEALNSLTGEFK"	"[K].lSVEALNSLTGEFk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"983.56696"	"1966.12663"	"1966.12611"	"0.26"	"0.00026"	"14/138"	"14"	"138"	"386453.055053711"	"HCD"	"MS2"	"27.32306"	"32.5"	"100.000"	"76.0207"	"25432"	"25432"	"25409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.0"	""	"21.9"	""	"21.4"	""	"12.1"	""	"18.2"	"187.3"	""	"889"	"41"	"36.000"	"29.000"	"0.00335638495197286"	"16"	"0"	"3.158E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDKK"	"[R].yLAEVAAGDDkk.[G]"	"N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.38501"	"1967.14048"	"1967.14165"	"-0.60"	"-0.00039"	"9/102"	"9"	"102"	"23029679.8120728"	"HCD"	"MS2"	"4.071845"	"1349.9"	"100.000"	"38.8735"	"10315"	"10315"	"10294"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1699.8"	""	"1890.6"	""	"1957.7"	""	"2294.5"	"25.2"	"2379.9"	"2541.0"	""	"836"	"38"	"36.000"	"29.000"	"0.00682615714219832"	"15"	"0"	"3.817E-06"	"1.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDKK"	"[R].yLAEVAAGDDkk.[G]"	"N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.38513"	"1967.14084"	"1967.14165"	"-0.41"	"-0.00027"	"10/102"	"10"	"102"	"2490595.57891846"	"HCD"	"MS2"	"14.10686"	"182.3"	"100.000"	"39.2401"	"10466"	"10466"	"10438"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"242.9"	""	"255.4"	""	"268.3"	""	"294.0"	"0.5"	"317.7"	"347.8"	""	"837"	"29"	"36.000"	"29.000"	"0.0544120968406932"	"14"	"0"	"1.136E-05"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDKK"	"[R].yLAEVAAGDDkk.[G]"	"N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.38605"	"1967.14359"	"1967.14165"	"0.98"	"0.00065"	"10/102"	"10"	"102"	"19244867.6149902"	"HCD"	"MS2"	"0"	"1171.4"	"100.000"	"38.9572"	"10393"	"10393"	"10366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1410.2"	""	"1582.4"	""	"1729.9"	""	"2041.8"	""	"2152.1"	"2202.4"	""	"805"	"17"	"36.000"	"29.000"	"0.899012819689289"	"14"	"0"	"2.164E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAWTHITIPESLK"	"[R].iAWTHITIPESLk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"A2RUW1"	"Toll-interacting protein OS=Rattus norvegicus OX=10116 GN=Tollip PE=1 SV=1"	"A2RUW1"	"Toll-interacting protein OS=Rattus norvegicus OX=10116 GN=Tollip PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.39569"	"1967.17252"	"1967.17300"	"-0.25"	"-0.00016"	"15/110"	"15"	"110"	"2849640.71905518"	"HCD"	"MS2"	"21.28103"	"81.4"	"100.000"	"62.1987"	"19798"	"19798"	"19769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.1"	""	"102.2"	""	"100.5"	""	"131.5"	""	"157.5"	"163.0"	""	"523"	"44"	"34.000"	"27.000"	"0.000971564624089107"	"15"	"0"	"3.327E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAWTHITIPESLK"	"[R].iAWTHITIPESLk.[Q]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"A2RUW1"	"Toll-interacting protein OS=Rattus norvegicus OX=10116 GN=Tollip PE=1 SV=1"	"A2RUW1"	"Toll-interacting protein OS=Rattus norvegicus OX=10116 GN=Tollip PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.39575"	"1967.17270"	"1967.17300"	"-0.15"	"-0.00010"	"15/110"	"15"	"110"	"2901433.10424805"	"HCD"	"MS2"	"0"	"80.1"	"100.000"	"62.3168"	"19899"	"19899"	"19875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.6"	""	"102.0"	""	"102.4"	""	"132.4"	""	"143.0"	"168.9"	""	"523"	"39"	"34.000"	"27.000"	"0.00311509785099158"	"15"	"0"	"4.444E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSEGKPYVTK"	"[R].aLSSEGkPYVTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.39746"	"1967.17783"	"1967.17804"	"-0.11"	"-0.00007"	"14/114"	"14"	"114"	"8499012.79418945"	"HCD"	"MS2"	"19.28657"	"566.5"	"100.000"	"35.6095"	"8975"	"8975"	"8955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"789.7"	""	"755.7"	""	"703.2"	""	"651.8"	"0.3"	"1094.9"	"1383.6"	""	"497"	"12"	"33.000"	"26.000"	"1.41685821661766"	"13"	"0"	"3.314E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSEGKPYVTK"	"[R].aLSSEGkPYVTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.39771"	"1967.17856"	"1967.17804"	"0.27"	"0.00017"	"6/114"	"6"	"114"	"12310672.578125"	"HCD"	"MS2"	"19.8418"	"645.3"	"79.921"	"35.6253"	"9025"	"9025"	"9001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"911.9"	""	"848.5"	""	"847.1"	""	"799.4"	""	"1238.5"	"1495.5"	""	"495"	"1"	"33.000"	"26.000"	"18.0125501622864"	"13"	"0.0001889"	"0.00101"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDYLNTFEFMDK"	"[R].sDYLNTFEFMDk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"984.49207"	"1967.97685"	"1967.98249"	"-2.86"	"-0.00282"	"16/122"	"16"	"122"	"643937.84765625"	"HCD"	"MS2"	"0"	"67.3"	"100.000"	"70.0118"	"23032"	"23032"	"23002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.5"	""	"88.8"	""	"95.6"	""	"71.9"	""	"119.5"	"130.1"	""	"943"	"42"	"36.000"	"29.000"	"0.00328459401403228"	"15"	"0"	"3.688E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDYLNTFEFMDK"	"[R].sDYLNTFEFMDk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"984.49384"	"1967.98039"	"1967.98249"	"-1.06"	"-0.00105"	"9/122"	"9"	"122"	"526636.925598145"	"HCD"	"MS2"	"0"	"53.0"	"100.000"	"70.1057"	"23018"	"23018"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.7"	""	"67.0"	""	"75.3"	""	"64.1"	""	"92.1"	"99.3"	""	"989"	"56"	"36.000"	"29.000"	"0.000118622287845514"	"16"	"0"	"1.73E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLPSLSPTMQAGTIAR"	"[K].vPLPSLSPTMQAGTIAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"984.56006"	"1968.11284"	"1968.11495"	"-1.07"	"-0.00105"	"9/158"	"9"	"158"	"623231.282287598"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"60.4424"	"19134"	"19134"	"19107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.5"	""	"24.0"	""	"25.3"	""	"27.2"	""	"24.9"	"33.0"	""	"1042"	"71"	"37.000"	"30.000"	"4.28388420622425E-06"	"17"	"0"	"1.695E-05"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLPSLSPTMQAGTIAR"	"[K].vPLPSLSPTMQAGTIAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"984.56134"	"1968.11540"	"1968.11495"	"0.23"	"0.00023"	"14/158"	"14"	"158"	"752934.882080078"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"60.3136"	"19028"	"19028"	"19001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.5"	""	"29.4"	""	"28.1"	""	"35.6"	""	"44.7"	"44.6"	""	"1025"	"61"	"37.000"	"30.000"	"3.71273429538433E-05"	"16"	"0"	"1.321E-05"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGVPVVVAMNAFK"	"[R].mFGVPVVVAMNAFk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.71014"	"1968.11588"	"1968.12150"	"-2.86"	"-0.00187"	"10/112"	"10"	"112"	"201273.842163086"	"HCD"	"MS2"	"34.18146"	"9.1"	"100.000"	"88.3340"	"30454"	"30454"	"30443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.8"	""	"15.1"	""	"15.0"	""	"11.7"	""	"20.3"	"14.7"	""	"1021"	"21"	"37.000"	"30.000"	"0.446679217253607"	"14"	"0.0004166"	"0.002163"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGVPVVVAMNAFK"	"[R].mFGVPVVVAMNAFk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"1"	"984.56372"	"1968.12016"	"1968.12150"	"-0.68"	"-0.00067"	"3/112"	"3"	"112"	"98533.0188598633"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"88.2753"	"30389"	"30389"	"30376"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"8.8"	""	"8.2"	""	"4.1"	""	"4.4"	"8.3"	""	"1001"	"0"	"36.000"	"30.000"	"45.1236354371781"	"13"	"0.004346"	"0.1164"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGVPVVVAMNAFK"	"[R].mFGVPVVVAMNAFk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"984.56396"	"1968.12065"	"1968.12150"	"-0.43"	"-0.00042"	"4/112"	"4"	"112"	"74614.5381469727"	"HCD"	"MS2"	"14.21621"	"3.0"	"100.000"	"88.3713"	"30468"	"30468"	"30457"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.4"	""	"5.5"	""	"6.7"	""	"2.3"	""	"6.5"	"3.6"	""	"996"	"3"	"36.000"	"29.000"	"24.0563283415807"	"13"	"0.003286"	"0.07151"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGVPVVVAMNAFK"	"[R].mFGVPVVVAMNAFk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"656.71204"	"1968.12156"	"1968.12150"	"0.03"	"0.00002"	"10/112"	"10"	"112"	"221219.034118652"	"HCD"	"MS2"	"32.92079"	"9.3"	"100.000"	"88.2664"	"30385"	"30385"	"30376"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.8"	""	"15.5"	""	"15.1"	""	"12.8"	""	"15.0"	"17.0"	""	"993"	"26"	"36.000"	"29.000"	"0.125290820353661"	"16"	"0.0002277"	"0.001323"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVmLIk.[A]"	"N-Term(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"656.72107"	"1968.14865"	"1968.14916"	"-0.26"	"-0.00017"	"13/104"	"13"	"104"	"3213528.81030273"	"HCD"	"MS2"	"1.605394"	"79.4"	"100.000"	"65.0548"	"21017"	"21017"	"20995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.9"	""	"74.3"	""	"58.7"	""	"199.1"	"0.1"	"179.1"	"174.8"	""	"751"	"37"	"35.000"	"28.000"	"0.00700825573908419"	"23"	"0"	"0.0001371"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVmLIk.[A]"	"N-Term(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"984.57825"	"1968.14922"	"1968.14916"	"0.03"	"0.00003"	"12/104"	"12"	"104"	"282259.09185791"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"64.7887"	"20856"	"20856"	"20825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.8"	""	"13.2"	""	"15.8"	""	"49.3"	""	"51.7"	"47.6"	""	"755"	"41"	"35.000"	"28.000"	"0.00333362662408008"	"21"	"0.0001308"	"0.0002959"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVmLIk.[A]"	"N-Term(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"656.72137"	"1968.14957"	"1968.14916"	"0.21"	"0.00014"	"13/104"	"13"	"104"	"3085227.24206543"	"HCD"	"MS2"	"13.77295"	"84.3"	"100.000"	"64.6988"	"20819"	"20819"	"20793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.6"	""	"84.9"	""	"84.8"	""	"202.8"	"0.7"	"172.2"	"185.0"	""	"739"	"50"	"35.000"	"28.000"	"0.000405148693474907"	"23"	"0"	"0.0001577"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVmLIk.[A]"	"N-Term(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"984.57867"	"1968.15007"	"1968.14916"	"0.46"	"0.00046"	"13/104"	"13"	"104"	"360190.280273438"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"65.1413"	"21000"	"21000"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.4"	""	"15.8"	""	"15.3"	""	"57.0"	""	"57.3"	"55.1"	""	"746"	"38"	"35.000"	"28.000"	"0.00580375180588693"	"22"	"0.0001889"	"0.0007967"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVmLIk.[A]"	"N-Term(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"656.72229"	"1968.15232"	"1968.14916"	"1.61"	"0.00105"	"13/104"	"13"	"104"	"2522812.48632813"	"HCD"	"MS2"	"27.08232"	"64.7"	"100.000"	"65.0170"	"20949"	"20949"	"20921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.7"	""	"54.6"	""	"60.9"	""	"152.9"	"4.1"	"144.4"	"143.1"	""	"714"	"53"	"35.000"	"28.000"	"0.000189089849469322"	"18"	"0"	"1.332E-05"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTETYSPVMLIK"	"[K].lVTETYSPVmLIk.[A]"	"N-Term(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"656.72241"	"1968.15268"	"1968.14916"	"1.79"	"0.00118"	"12/104"	"12"	"104"	"3436068.62524414"	"HCD"	"MS2"	"17.68279"	"93.6"	"100.000"	"64.6676"	"20859"	"20859"	"20835"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.4"	""	"84.1"	""	"87.3"	""	"205.7"	""	"219.8"	"212.0"	""	"722"	"42"	"35.000"	"28.000"	"0.00249750980501736"	"16"	"0"	"0.0001838"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFSLTNGMYPHK"	"[R].sQFSLTnGMYPHk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K13(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"657.01318"	"1969.02500"	"1969.02535"	"-0.18"	"-0.00012"	"10/128"	"10"	"128"	"4848964.16162109"	"HCD"	"MS2"	"11.51709"	"159.6"	"100.000"	"43.9375"	"12373"	"12373"	"12342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"261.8"	""	"200.9"	""	"215.2"	""	"242.7"	""	"306.8"	"285.4"	""	"1138"	"40"	"37.000"	"30.000"	"0.00561193027324159"	"17"	"0"	"9.43E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFSLTNGMYPHK"	"[R].sQFSLTnGMYPHk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K13(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.6909"	"0.0000"	"1"	"1"	"1"	"657.01398"	"1969.02738"	"1969.02535"	"1.03"	"0.00067"	"10/128"	"10"	"128"	"4675349.22705078"	"HCD"	"MS2"	"11.21483"	"150.8"	"100.000"	"44.2752"	"12560"	"12560"	"12540"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"249.8"	""	"196.8"	""	"206.1"	""	"210.9"	""	"285.7"	"280.0"	""	"1144"	"55"	"37.000"	"30.000"	"0.000182976800274348"	"18"	"0"	"3.363E-06"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDQISSGFFSPK"	"[R].qAVDQISSGFFSPk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.02997"	"1969.07535"	"1969.07950"	"-2.11"	"-0.00138"	"13/146"	"13"	"146"	"2038937.1383667"	"HCD"	"MS2"	"22.32211"	"97.9"	"100.000"	"57.6571"	"18001"	"18001"	"17973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.9"	""	"130.8"	""	"130.0"	""	"151.4"	"0.2"	"165.4"	"190.8"	""	"1153"	"31"	"37.000"	"30.000"	"0.0411907131982533"	"14"	"0"	"1.606E-05"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDQISSGFFSPK"	"[R].qAVDQISSGFFSPk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.8615"	"0.0000"	"1"	"1"	"1"	"657.03119"	"1969.07901"	"1969.07950"	"-0.25"	"-0.00016"	"14/146"	"14"	"146"	"2045069.2935791"	"HCD"	"MS2"	"9.832954"	"80.8"	"100.000"	"57.4489"	"17862"	"17862"	"17835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.2"	""	"116.0"	""	"101.1"	""	"143.1"	"2.7"	"160.3"	"143.4"	""	"1150"	"65"	"37.000"	"30.000"	"1.95734709078075E-05"	"26"	"0"	"1.346E-06"	"1.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVENVTVFGTASASK"	"[R].tVENVTVFGTASASk.[H]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.9492"	"0.0000"	"1"	"1"	"1"	"985.05176"	"1969.09624"	"1969.10063"	"-2.23"	"-0.00219"	"18/160"	"18"	"160"	"537143.5625"	"HCD"	"MS2"	"100"	"41.7"	"100.000"	"45.9617"	"13244"	"13244"	"13227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.2"	""	"53.0"	""	"58.7"	""	"75.9"	""	"80.3"	"89.5"	""	"1064"	"59"	"37.000"	"30.000"	"6.38133629275469E-05"	"20"	"0"	"1.007E-05"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVENVTVFGTASASK"	"[R].tVENVTVFGTASASk.[H]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"985.05212"	"1969.09697"	"1969.10063"	"-1.86"	"-0.00183"	"18/160"	"18"	"160"	"328167.667602539"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"45.7707"	"13117"	"13117"	"13091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.4"	""	"27.4"	""	"33.8"	""	"39.2"	"1.0"	"46.9"	"51.7"	""	"1061"	"74"	"37.000"	"30.000"	"1.92612908055539E-06"	"19"	"0"	"4.816E-06"	"1.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGFVLLDGETFEVK"	"[K].gGFVLLDGETFEVk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"985.05432"	"1969.10137"	"1969.10465"	"-1.67"	"-0.00164"	"17/114"	"17"	"114"	"477834.649719238"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"73.1086"	"24296"	"24296"	"24271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.1"	""	"66.4"	""	"60.3"	""	"68.5"	""	"82.8"	"77.1"	""	"1053"	"44"	"37.000"	"30.000"	"0.00223562200417734"	"21"	"0"	"1.383E-05"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGFVLLDGETFEVK"	"[K].gGFVLLDGETFEVk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"985.05487"	"1969.10246"	"1969.10465"	"-1.11"	"-0.00109"	"10/114"	"10"	"114"	"400897.50604248"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"73.1475"	"24260"	"24260"	"24241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.9"	""	"47.1"	""	"56.8"	""	"63.1"	"2.7"	"63.9"	"74.1"	""	"1045"	"66"	"37.000"	"30.000"	"1.36800062179442E-05"	"23"	"0"	"5.499E-06"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGFVLLDGETFEVK"	"[K].gGFVLLDGETFEVk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"657.03912"	"1969.10282"	"1969.10465"	"-0.93"	"-0.00061"	"8/114"	"8"	"114"	"2907702.45245361"	"HCD"	"MS2"	"7.518284"	"78.7"	"100.000"	"73.1339"	"24306"	"24306"	"24287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.9"	""	"122.1"	""	"127.9"	""	"122.5"	""	"139.1"	"136.3"	""	"1046"	"51"	"37.000"	"30.000"	"0.000439037572949645"	"21"	"0"	"3.548E-06"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKPPPPNSDIGWR"	"[R].fkPPPPNSDIGWR.[V]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.03931"	"1969.10337"	"1969.10599"	"-1.33"	"-0.00087"	"9/120"	"9"	"120"	"10604704.8369751"	"HCD"	"MS2"	"34.54755"	"443.1"	"100.000"	"41.4510"	"11369"	"11369"	"11341"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"805.8"	""	"700.9"	""	"626.4"	""	"651.8"	"10.5"	"696.1"	"694.1"	""	"1040"	"8"	"37.000"	"30.000"	"8.62985191867531"	"13"	"0.0001889"	"0.0003991"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGFVLLDGETFEVK"	"[K].gGFVLLDGETFEVk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"657.03986"	"1969.10501"	"1969.10465"	"0.19"	"0.00012"	"9/114"	"9"	"114"	"2307638.75183105"	"HCD"	"MS2"	"0"	"73.3"	"100.000"	"73.1223"	"24250"	"24250"	"24225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.7"	""	"96.0"	""	"112.1"	""	"121.2"	""	"132.0"	"143.8"	""	"1020"	"39"	"37.000"	"30.000"	"0.00649486571318497"	"22"	"0"	"2.421E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGAFGYFEVTHDITR"	"[K].gAGAFGYFEVTHDITR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"657.33630"	"1969.99436"	"1969.99694"	"-1.31"	"-0.00086"	"20/132"	"20"	"132"	"5131810.35900879"	"HCD"	"MS2"	"6.929744"	"68.9"	"100.000"	"50.7915"	"15211"	"15211"	"15190"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.9"	""	"79.9"	""	"100.7"	""	"121.6"	"0.1"	"122.3"	"127.6"	""	"1031"	"53"	"37.000"	"30.000"	"0.000263165327487322"	"18"	"0"	"1.269E-06"	"1.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGAFGYFEVTHDITR"	"[K].gAGAFGYFEVTHDITR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"657.33691"	"1969.99619"	"1969.99694"	"-0.38"	"-0.00025"	"12/132"	"12"	"132"	"4541373.60058594"	"HCD"	"MS2"	"2.934507"	"63.7"	"100.000"	"50.6255"	"15093"	"15093"	"15074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.7"	""	"84.5"	""	"82.0"	""	"111.7"	"1.5"	"118.7"	"118.5"	""	"1028"	"56"	"37.000"	"30.000"	"0.00014320662806757"	"18"	"0"	"3.096E-07"	"1.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAPSQPLLFGK"	"[K].kPAPSQPLLFGk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.41730"	"1970.23734"	"1970.24058"	"-1.64"	"-0.00108"	"8/110"	"8"	"110"	"9399529.34307861"	"HCD"	"MS2"	"84.14935"	"431.2"	"100.000"	"42.1614"	"11657"	"11657"	"11631"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"524.6"	""	"504.2"	""	"537.5"	""	"888.3"	"1.4"	"804.3"	"828.7"	""	"162"	"36"	"29.000"	"22.000"	"0.00219020627492817"	"15"	"0.0001889"	"0.0004195"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAPSQPLLFGK"	"[K].kPAPSQPLLFGk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.41766"	"1970.23844"	"1970.24058"	"-1.09"	"-0.00071"	"8/110"	"8"	"110"	"7175970.55651855"	"HCD"	"MS2"	"64.92172"	"326.7"	"100.000"	"42.3450"	"11776"	"11776"	"11751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"489.6"	""	"467.0"	""	"473.1"	""	"515.7"	"3.2"	"572.2"	"571.7"	""	"164"	"43"	"29.000"	"22.000"	"0.000404402519243047"	"15"	"0"	"2.063E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAPSQPLLFGK"	"[K].kPAPSQPLLFGk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.41797"	"1970.23935"	"1970.24058"	"-0.62"	"-0.00041"	"8/110"	"8"	"110"	"12511205.7942505"	"HCD"	"MS2"	"2.869609"	"373.8"	"78.357"	"42.6340"	"11894"	"11894"	"11875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"545.8"	""	"523.5"	""	"611.2"	""	"572.1"	""	"600.9"	"687.0"	""	"158"	"39"	"28.000"	"21.000"	"0.00091543411136255"	"15"	"0"	"2.764E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKFEELNMDLFR"	"[R].akFEELNMDLFR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.69617"	"1971.07395"	"1971.07739"	"-1.75"	"-0.00115"	"10/118"	"10"	"118"	"5394912.43353271"	"HCD"	"MS2"	"16.30464"	"286.9"	"100.000"	"61.1570"	"19426"	"19426"	"19395"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"518.5"	""	"397.2"	""	"443.4"	""	"325.1"	""	"486.1"	"548.9"	""	"1088"	"18"	"37.000"	"30.000"	"0.830995935681512"	"14"	"0"	"2.488E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKFEELNMDLFR"	"[R].akFEELNMDLFR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.69788"	"1971.07907"	"1971.07739"	"0.85"	"0.00056"	"10/118"	"10"	"118"	"2177236.37371826"	"HCD"	"MS2"	"14.02111"	"129.6"	"100.000"	"61.3167"	"19437"	"19437"	"19417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.1"	""	"185.7"	""	"214.5"	""	"142.2"	""	"230.1"	"250.0"	""	"1086"	"23"	"37.000"	"30.000"	"0.26779337554753"	"14"	"0"	"1.163E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKFEELNMDLFR"	"[R].akFEELNMDLFR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.69788"	"1971.07907"	"1971.07739"	"0.85"	"0.00056"	"10/118"	"10"	"118"	"5065331.66998291"	"HCD"	"MS2"	"13.32797"	"274.0"	"100.000"	"61.0099"	"19312"	"19312"	"19289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"500.5"	""	"406.3"	""	"437.3"	""	"281.1"	""	"445.0"	"525.6"	""	"1086"	"17"	"37.000"	"30.000"	"1.10103171670006"	"14"	"0"	"5.493E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHLISMQSTIPYALR"	"[K].iHLISMQSTIPYALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.9206"	"0.0000"	"1"	"1"	"1"	"658.04645"	"1972.12479"	"1972.12512"	"-0.17"	"-0.00011"	"8/136"	"8"	"136"	"9528403.16943359"	"HCD"	"MS2"	"37.34864"	"105.6"	"92.808"	"59.5586"	"18719"	"18719"	"18697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.8"	""	"130.9"	""	"158.0"	""	"161.2"	"0.9"	"199.3"	"205.5"	""	"927"	"63"	"36.000"	"29.000"	"2.18297990784988E-05"	"22"	"0"	"9.827E-07"	"1.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHLISMQSTIPYALR"	"[K].iHLISMQSTIPYALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.8955"	"0.0000"	"1"	"1"	"1"	"658.04669"	"1972.12552"	"1972.12512"	"0.20"	"0.00013"	"8/136"	"8"	"136"	"9608077.67254639"	"HCD"	"MS2"	"38.40368"	"114.8"	"100.000"	"59.6944"	"18828"	"18828"	"18805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.7"	""	"147.5"	""	"168.2"	""	"162.4"	"3.2"	"228.4"	"236.9"	""	"926"	"67"	"36.000"	"29.000"	"9.25936045639961E-06"	"23"	"0"	"1.28E-06"	"1.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGIPLLQPYTTEER"	"[R].lLGIPLLQPYTTEER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQJ7"	"Tubulin-specific chaperone cofactor E-like protein OS=Rattus norvegicus OX=10116 GN=Tbcel PE=1 SV=1"	"Q5PQJ7"	"Tubulin-specific chaperone cofactor E-like protein OS=Rattus norvegicus OX=10116 GN=Tbcel PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.04767"	"1972.12845"	"1972.13164"	"-1.62"	"-0.00106"	"13/132"	"13"	"132"	"533490.435119629"	"HCD"	"MS2"	"34.35433"	"17.2"	"100.000"	"80.8307"	"27384"	"27384"	"27360"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.4"	""	"21.8"	""	"40.8"	""	"19.3"	""	"28.6"	"30.5"	""	"902"	"21"	"36.000"	"29.000"	"0.324471489079669"	"14"	"7.476E-05"	"0.0002043"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGIPLLQPYTTEER"	"[R].lLGIPLLQPYTTEER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQJ7"	"Tubulin-specific chaperone cofactor E-like protein OS=Rattus norvegicus OX=10116 GN=Tbcel PE=1 SV=1"	"Q5PQJ7"	"Tubulin-specific chaperone cofactor E-like protein OS=Rattus norvegicus OX=10116 GN=Tbcel PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"986.56921"	"1972.13115"	"1972.13164"	"-0.25"	"-0.00025"	"4/132"	"4"	"132"	"61494.8706665039"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"80.9041"	"27465"	"27465"	"27438"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1.9"	""	"4.6"	""	"2.0"	""	"3.3"	""	""	"4.7"	""	"872"	"1"	"36.000"	"29.000"	"37.5393275952486"	"13"	"0.001846"	"0.02572"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYDLSAIGLDGEK"	"[K].sFYDLSAIGLDGEk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"987.03363"	"1973.05998"	"1973.06318"	"-1.62"	"-0.00160"	"12/128"	"12"	"128"	"306368.85736084"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"69.7178"	"22912"	"22912"	"22882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.0"	""	"43.5"	""	"44.4"	""	"37.5"	""	"39.7"	"46.1"	""	"1120"	"28"	"37.000"	"30.000"	"0.0979914145629807"	"20"	"0.0003839"	"0.00157"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYDLSAIGLDGEK"	"[K].sFYDLSAIGLDGEk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"987.03369"	"1973.06011"	"1973.06318"	"-1.56"	"-0.00154"	"16/128"	"16"	"128"	"489222.920715332"	"HCD"	"MS2"	"0"	"46.1"	"100.000"	"69.7913"	"22890"	"22890"	"22869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.8"	""	"79.6"	""	"67.7"	""	"67.8"	""	"77.6"	"84.9"	""	"1124"	"46"	"37.000"	"30.000"	"0.00130237579328228"	"16"	"0"	"1.019E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYDLSAIGLDGEK"	"[K].sFYDLSAIGLDGEk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"658.35828"	"1973.06028"	"1973.06318"	"-1.47"	"-0.00097"	"15/128"	"15"	"128"	"2774567.66967773"	"HCD"	"MS2"	"0"	"96.2"	"100.000"	"69.6032"	"22865"	"22865"	"22842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.4"	""	"139.7"	""	"151.9"	""	"157.5"	"1.5"	"155.0"	"166.3"	""	"1129"	"58"	"37.000"	"30.000"	"8.58349080533994E-05"	"19"	"0"	"4.973E-06"	"1.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYDLSAIGLDGEK"	"[K].sFYDLSAIGLDGEk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"658.35968"	"1973.06449"	"1973.06318"	"0.66"	"0.00044"	"13/128"	"13"	"128"	"2485865.66973877"	"HCD"	"MS2"	"7.892775"	"90.1"	"100.000"	"69.7570"	"22876"	"22876"	"22858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"126.3"	""	"142.5"	""	"145.5"	""	"147.8"	""	"134.9"	"154.6"	""	"1120"	"45"	"37.000"	"30.000"	"0.00194172636253417"	"17"	"0"	"1.162E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHLISMQSTIPYALR"	"[K].iHLISMqSTIPYALR.[I]"	"N-Term(TMT6plex); Q7(Deamidated)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"658.36328"	"1973.07529"	"1973.10913"	"-17.15"	"-0.01128"	"13/136"	"13"	"136"	"7328416.50476074"	"HCD"	"MS2"	"21.88759"	"132.3"	"100.000"	"59.4760"	"18685"	"18685"	"18665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.5"	""	"171.5"	""	"207.5"	""	"174.9"	""	"256.8"	"295.4"	""	"1127"	"15"	"37.000"	"30.000"	"1.83608981014632"	"18"	"0.0001889"	"0.0009448"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHLISMQSTIPYALR"	"[K].iHLISMqSTIPYALR.[I]"	"N-Term(TMT6plex); Q7(Deamidated)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"658.36328"	"1973.07529"	"1973.10913"	"-17.15"	"-0.01128"	"11/136"	"11"	"136"	"9686176.74517822"	"HCD"	"MS2"	"33.47087"	"184.0"	"100.000"	"59.6045"	"18791"	"18791"	"18773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"208.3"	""	"232.5"	""	"275.0"	""	"264.1"	""	"368.2"	"399.9"	""	"1127"	"34"	"37.000"	"30.000"	"0.0229030815984597"	"16"	"0.0001859"	"0.0003439"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNEQIHQLVAAYK"	"[R].tNEQIHQLVAAYk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.37854"	"1973.12107"	"1973.12203"	"-0.49"	"-0.00032"	"15/122"	"15"	"122"	"8496341.24200439"	"HCD"	"MS2"	"7.247006"	"302.1"	"100.000"	"42.4719"	"11784"	"11784"	"11756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"417.8"	""	"357.3"	""	"339.8"	""	"547.5"	""	"605.7"	"600.7"	""	"956"	"30"	"36.000"	"29.000"	"0.0456486456118247"	"14"	"0"	"3.79E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNEQIHQLVAAYK"	"[R].tNEQIHQLVAAYk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"658.37866"	"1973.12143"	"1973.12203"	"-0.30"	"-0.00020"	"15/122"	"15"	"122"	"10003170.2471924"	"HCD"	"MS2"	"16.26797"	"337.5"	"100.000"	"42.7581"	"11945"	"11945"	"11923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"495.7"	""	"383.0"	""	"397.0"	""	"573.4"	"8.9"	"689.6"	"654.6"	""	"954"	"44"	"36.000"	"29.000"	"0.00205361193204546"	"18"	"0"	"4.948E-06"	"1.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAILLGMLDPAEK"	"[R].dLAILLGmLDPAEk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K14(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.38397"	"1973.13736"	"1973.13932"	"-0.99"	"-0.00065"	"12/128"	"12"	"128"	"446455.761474609"	"HCD"	"MS2"	"37.993"	"11.7"	"100.000"	"87.0399"	"29906"	"29906"	"29884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.9"	""	"6.9"	""	"14.3"	""	"24.0"	""	"31.5"	"24.2"	""	"896"	"30"	"36.000"	"29.000"	"0.0501508171793283"	"15"	"0"	"3.957E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"987.52124"	"1974.03520"	"1974.04132"	"-3.10"	"-0.00306"	"9/96"	"9"	"96"	"1085244.4229126"	"HCD"	"MS2"	"0"	"78.3"	"100.000"	"70.8745"	"23384"	"23384"	"23354"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.7"	""	"111.1"	""	"117.9"	""	"111.3"	"1.3"	"136.7"	"138.4"	""	"1236"	"35"	"37.000"	"30.000"	"0.019408343728155"	"20"	"0.0001889"	"0.0003901"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"987.52283"	"1974.03838"	"1974.04132"	"-1.49"	"-0.00147"	"8/96"	"8"	"96"	"96701.1318359375"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"72.7673"	"24157"	"24157"	"24127"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"8.5"	""	"11.1"	""	"12.5"	""	"25.6"	"12.0"	""	"1223"	"15"	"37.000"	"30.000"	"1.88536943157748"	"16"	"0.0003839"	"0.001943"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"987.52319"	"1974.03911"	"1974.04132"	"-1.12"	"-0.00111"	"10/96"	"10"	"96"	"6760120.39416504"	"HCD"	"MS2"	"0"	"355.1"	"84.087"	"71.4691"	"23627"	"23627"	"23610"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"527.3"	""	"526.6"	""	"558.1"	""	"552.0"	""	"565.6"	"632.0"	""	"1218"	"40"	"37.000"	"30.000"	"0.00681737671031495"	"23"	"0.0001889"	"0.0005763"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"987.52332"	"1974.03935"	"1974.04132"	"-1.00"	"-0.00098"	"10/96"	"10"	"96"	"17787729.2154541"	"HCD"	"MS2"	"0"	"582.3"	"55.660"	"71.1560"	"23499"	"23499"	"23482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"903.0"	""	"879.5"	""	"912.2"	""	"895.9"	""	"950.1"	"973.9"	""	"1216"	"40"	"37.000"	"30.000"	"0.00644026264907792"	"25"	"0.0001889"	"0.0004516"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"987.52344"	"1974.03960"	"1974.04132"	"-0.87"	"-0.00086"	"15/96"	"15"	"96"	"1140248.62371826"	"HCD"	"MS2"	"0"	"83.3"	"100.000"	"70.9684"	"23370"	"23370"	"23347"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.3"	""	"134.7"	""	"124.4"	""	"128.8"	"0.7"	"131.0"	"134.6"	""	"1204"	"38"	"37.000"	"30.000"	"0.00980836211649111"	"27"	"0.0001859"	"0.0003653"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"987.52356"	"1974.03984"	"1974.04132"	"-0.75"	"-0.00074"	"13/96"	"13"	"96"	"766226.93182373"	"HCD"	"MS2"	"0"	"64.7"	"100.000"	"71.7890"	"23757"	"23757"	"23738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.4"	""	"83.2"	""	"85.5"	""	"113.6"	""	"128.8"	"125.7"	""	"1217"	"26"	"37.000"	"30.000"	"0.14297515714862"	"15"	"0.0001889"	"0.0009861"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"987.52368"	"1974.04009"	"1974.04132"	"-0.63"	"-0.00062"	"11/96"	"11"	"96"	"675421.735900879"	"HCD"	"MS2"	"0"	"57.3"	"100.000"	"71.8985"	"23750"	"23750"	"23731"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.5"	""	"62.6"	""	"69.6"	""	"104.5"	""	"108.2"	"123.2"	""	"1236"	"9"	"37.000"	"30.000"	"8.55044022204561"	"13"	"0.0006037"	"0.004456"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"658.68494"	"1974.04026"	"1974.04132"	"-0.54"	"-0.00036"	"14/96"	"14"	"96"	"6220216.34222412"	"HCD"	"MS2"	"6.586794"	"166.8"	"100.000"	"70.9959"	"23381"	"23381"	"23363"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"260.7"	""	"261.6"	""	"260.1"	""	"245.5"	""	"279.9"	"270.5"	""	"1235"	"25"	"37.000"	"30.000"	"0.206365437216125"	"15"	"0.0001308"	"0.0002434"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.68506"	"1974.04062"	"1974.04132"	"-0.35"	"-0.00023"	"9/96"	"9"	"96"	"2446987.78015137"	"HCD"	"MS2"	"18.23685"	"91.8"	"98.753"	"71.7034"	"23670"	"23670"	"23651"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.4"	""	"126.4"	""	"130.4"	""	"154.6"	""	"180.3"	"180.5"	""	"1233"	"10"	"37.000"	"30.000"	"5.74028005225917"	"13"	"0.001217"	"0.01789"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"987.52405"	"1974.04082"	"1974.04132"	"-0.25"	"-0.00025"	"9/96"	"9"	"96"	"18919439.3905029"	"HCD"	"MS2"	"0"	"593.7"	"47.902"	"71.2659"	"23492"	"23492"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"919.6"	""	"894.9"	""	"937.6"	""	"897.2"	""	"967.6"	"1008.5"	""	"1233"	"40"	"37.000"	"30.000"	"0.00626517319154784"	"24"	"0.0001889"	"0.0007154"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.68524"	"1974.04117"	"1974.04132"	"-0.08"	"-0.00005"	"7/96"	"7"	"96"	"16423578.5283203"	"HCD"	"MS2"	"7.275044"	"179.2"	"34.715"	"71.6184"	"23636"	"23636"	"23619"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.3"	""	"245.5"	""	"247.8"	""	"283.4"	""	"355.5"	"338.4"	""	"1237"	"17"	"37.000"	"30.000"	"1.20875895339708"	"14"	"0.0007076"	"0.006912"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"658.68524"	"1974.04117"	"1974.04132"	"-0.08"	"-0.00005"	"13/96"	"13"	"96"	"10402783.3116455"	"HCD"	"MS2"	"8.939635"	"273.7"	"100.000"	"70.9600"	"23419"	"23419"	"23402"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"424.0"	""	"423.1"	""	"409.0"	""	"408.5"	"0.5"	"462.6"	"461.7"	""	"1237"	"50"	"37.000"	"30.000"	"0.000668866898877775"	"20"	"0"	"5.883E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"658.68542"	"1974.04172"	"1974.04132"	"0.20"	"0.00013"	"11/96"	"11"	"96"	"11181131.6037598"	"HCD"	"MS2"	"27.79865"	"242.4"	"68.059"	"71.5868"	"23675"	"23675"	"23658"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"336.8"	""	"337.9"	""	"346.9"	""	"384.2"	""	"442.8"	"448.3"	""	"1237"	"22"	"37.000"	"30.000"	"0.422026482326623"	"15"	"0"	"0.0001664"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"987.52472"	"1974.04216"	"1974.04132"	"0.43"	"0.00042"	"8/96"	"8"	"96"	"107586.786193848"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"72.7693"	"24106"	"24106"	"24081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"8.6"	""	"13.0"	""	"11.4"	"1.9"	"27.9"	"15.4"	""	"1216"	"14"	"37.000"	"30.000"	"2.37631264641781"	"14"	"0.0006037"	"0.00425"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"987.52478"	"1974.04228"	"1974.04132"	"0.49"	"0.00048"	"9/96"	"9"	"96"	"4778884.65856934"	"HCD"	"MS2"	"0"	"305.3"	"100.000"	"71.5792"	"23620"	"23620"	"23603"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"481.6"	""	"476.7"	""	"456.9"	""	"458.7"	""	"503.7"	"516.1"	""	"1236"	"42"	"37.000"	"30.000"	"0.00423631723947745"	"26"	"0.0001859"	"0.0003506"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"658.68652"	"1974.04502"	"1974.04132"	"1.87"	"0.00123"	"9/96"	"9"	"96"	"90294364.3803711"	"HCD"	"MS2"	"0.08311753"	"210.9"	"8.438"	"71.2735"	"23547"	"23547"	"23530"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"325.2"	""	"314.5"	""	"330.1"	""	"308.1"	""	"360.9"	"360.8"	""	"1225"	"38"	"37.000"	"30.000"	"0.0105221888713402"	"19"	"0.0003839"	"0.001546"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFYPPDIYTEWK"	"[K].gFYPPDIYTEWk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"658.68671"	"1974.04557"	"1974.04132"	"2.15"	"0.00141"	"15/96"	"15"	"96"	"84867198.5932617"	"HCD"	"MS2"	"0.05521256"	"211.5"	"9.445"	"71.3051"	"23508"	"23508"	"23491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"339.3"	""	"327.0"	""	"337.1"	""	"312.2"	""	"328.6"	"357.5"	""	"1224"	"36"	"37.000"	"30.000"	"0.0147147003360424"	"19"	"0.0001889"	"0.000436"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTTTQPSLELDGLEK"	"[K].NVTTTQPSLELDGLEk.[Y]"	"K16(TMT6plex)"	"1"	"1"	"Q8VHZ8"	"Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1"	"Q8VHZ8"	"Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus OX=10116 GN=Dscam PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"658.69281"	"1974.06388"	"1974.05927"	"2.34"	"0.00154"	"8/174"	"8"	"174"	"1324898.16821289"	"HCD"	"MS2"	"36.31537"	"48.6"	"100.000"	"69.8393"	"22961"	"22961"	"22943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.1"	""	"75.5"	""	"68.6"	""	"80.4"	""	"82.4"	"84.7"	""	"1200"	"6"	"37.000"	"30.000"	"16.0380384519799"	"15"	"0.006124"	"0.2197"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGNAIEPVILFQK"	"[R].sVGNAIEPVILFqk.[M]"	"N-Term(TMT6plex); Q13(Deamidated); K14(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"658.73383"	"1974.18692"	"1974.16759"	"9.80"	"0.00645"	"15/136"	"15"	"136"	"1173612.71905518"	"HCD"	"MS2"	"9.817218"	"43.0"	"100.000"	"69.1446"	"22626"	"22626"	"22602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.3"	""	"62.5"	""	"63.5"	""	"63.7"	"1.3"	"76.8"	"78.3"	""	"533"	"25"	"34.000"	"27.000"	"0.0779286608695248"	"15"	"0.0001889"	"0.0006472"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPAWVSFPDVEK"	"[R].eLPAWVSFPDVEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"988.05017"	"1975.09307"	"1975.09409"	"-0.52"	"-0.00051"	"14/118"	"14"	"118"	"185278.000854492"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"76.0691"	"25500"	"25500"	"25471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.6"	""	"14.3"	""	"21.3"	""	"19.0"	""	"21.8"	"26.9"	""	"1223"	"45"	"37.000"	"30.000"	"0.00197877521212468"	"17"	"0"	"7.202E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPAWVSFPDVEK"	"[R].eLPAWVSFPDVEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"988.05078"	"1975.09429"	"1975.09409"	"0.10"	"0.00010"	"11/118"	"11"	"118"	"214009.813476563"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"76.1014"	"25465"	"25465"	"25441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.0"	""	"17.7"	""	"15.6"	""	"24.7"	""	"32.6"	"32.2"	""	"1222"	"36"	"37.000"	"30.000"	"0.0155253432309062"	"15"	"0.0001889"	"0.0004541"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPAWVSFPDVEK"	"[R].eLPAWVSFPDVEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"659.03632"	"1975.09439"	"1975.09409"	"0.16"	"0.00010"	"10/118"	"10"	"118"	"2433071.41436768"	"HCD"	"MS2"	"1.870466"	"57.9"	"100.000"	"76.0046"	"25426"	"25426"	"25409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.4"	""	"69.3"	""	"81.2"	""	"100.3"	""	"115.4"	"112.2"	""	"1223"	"38"	"37.000"	"30.000"	"0.01021871910651"	"16"	"0"	"7.887E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPAWVSFPDVEK"	"[R].eLPAWVSFPDVEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"659.03650"	"1975.09494"	"1975.09409"	"0.43"	"0.00029"	"11/118"	"11"	"118"	"2067543.79486084"	"HCD"	"MS2"	"11.82841"	"58.1"	"100.000"	"75.9230"	"25444"	"25444"	"25423"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.2"	""	"74.1"	""	"68.7"	""	"93.3"	"0.0"	"112.7"	"120.6"	""	"1214"	"33"	"37.000"	"30.000"	"0.0310590874172967"	"15"	"0"	"7.15E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSVTPIPEGYSIK"	"[K].lLSVTPIPEGYSIk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4KM45"	"UPF0687 protein C20orf27 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q4KM45"	"UPF0687 protein C20orf27 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"659.06744"	"1975.18778"	"1975.18799"	"-0.11"	"-0.00007"	"11/122"	"11"	"122"	"1104709.96313477"	"HCD"	"MS2"	"25.59866"	"46.5"	"100.000"	"68.9863"	"22613"	"22613"	"22586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.1"	""	"60.1"	""	"73.1"	""	"74.9"	"1.2"	"87.5"	"84.5"	""	"554"	"17"	"34.000"	"27.000"	"0.608807184761397"	"17"	"0"	"0.0001325"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEGPAFNFLDAPAVR"	"[R].iMEGPAFNFLDAPAVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"989.02527"	"1977.04326"	"1977.04653"	"-1.66"	"-0.00164"	"12/152"	"12"	"152"	"789373.513671875"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"77.0291"	"25884"	"25884"	"25861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.3"	""	"48.8"	""	"50.7"	""	"53.8"	""	"63.1"	"81.6"	""	"1246"	"43"	"37.000"	"30.000"	"0.00325452825746452"	"18"	"0"	"7.554E-06"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEGPAFNFLDAPAVR"	"[R].iMEGPAFNFLDAPAVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"989.02576"	"1977.04424"	"1977.04653"	"-1.16"	"-0.00115"	"7/152"	"7"	"152"	"443835.03326416"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"77.0210"	"25830"	"25830"	"25801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.9"	""	"39.4"	""	"32.6"	""	"28.0"	"1.1"	"49.8"	"47.1"	""	"1244"	"51"	"37.000"	"30.000"	"0.00054675200546881"	"22"	"0.0001308"	"0.0002871"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEGPAFNFLDAPAVR"	"[R].iMEGPAFNFLDAPAVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"989.02618"	"1977.04509"	"1977.04653"	"-0.73"	"-0.00072"	"5/152"	"5"	"152"	"145895.377197266"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"77.3162"	"25950"	"25950"	"25929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.1"	""	"12.5"	""	"14.0"	""	"14.8"	""	"18.1"	"18.9"	""	"1245"	"21"	"37.000"	"30.000"	"0.460404283723753"	"15"	"0.0003839"	"0.001602"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEGPAFNFLDAPAVR"	"[R].iMEGPAFNFLDAPAVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"659.68665"	"1977.04538"	"1977.04653"	"-0.58"	"-0.00038"	"15/152"	"15"	"152"	"3771346.3069458"	"HCD"	"MS2"	"11.9773"	"31.3"	"100.000"	"77.0762"	"25852"	"25852"	"25833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.4"	""	"37.6"	""	"44.8"	""	"49.1"	""	"71.4"	"55.4"	""	"1242"	"42"	"37.000"	"30.000"	"0.0040187556437987"	"17"	"0"	"2.442E-06"	"1.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEGPAFNFLDAPAVR"	"[R].iMEGPAFNFLDAPAVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"659.68683"	"1977.04593"	"1977.04653"	"-0.30"	"-0.00020"	"14/152"	"14"	"152"	"4028806.17974854"	"HCD"	"MS2"	"8.313249"	"30.2"	"100.000"	"77.1007"	"25913"	"25913"	"25893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.1"	""	"41.3"	""	"41.9"	""	"43.8"	""	"64.0"	"61.6"	""	"1263"	"37"	"38.000"	"31.000"	"0.0125711021357041"	"15"	"0"	"2.94E-06"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPGMPSFAPDKPGR"	"[K].yPGMPSFAPDkPGR.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"660.02472"	"1978.05960"	"1978.06207"	"-1.25"	"-0.00082"	"10/118"	"10"	"118"	"6665886.92926025"	"HCD"	"MS2"	"36.07298"	"262.8"	"100.000"	"43.2392"	"12141"	"12141"	"12127"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"357.1"	""	"416.0"	""	"450.4"	""	"270.6"	"3.0"	"492.4"	"500.5"	""	"1305"	"42"	"38.000"	"31.000"	"0.00390463565776859"	"16"	"0"	"9.141E-06"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPGMPSFAPDKPGR"	"[K].yPGMPSFAPDkPGR.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"660.02484"	"1978.05997"	"1978.06207"	"-1.06"	"-0.00070"	"12/118"	"12"	"118"	"5941056.35552979"	"HCD"	"MS2"	"0"	"249.3"	"100.000"	"42.9599"	"11982"	"11982"	"11966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"340.9"	""	"403.0"	""	"420.0"	""	"276.0"	"2.4"	"441.0"	"477.5"	""	"1308"	"32"	"38.000"	"31.000"	"0.0451416831711518"	"14"	"0"	"1.32E-05"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAmAk.[E]"	"N-Term(TMT6plex); M12(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"989.57513"	"1978.14299"	"1978.14474"	"-0.88"	"-0.00087"	"9/122"	"9"	"122"	"887958.018249512"	"HCD"	"MS2"	"0"	"50.0"	"100.000"	"55.6127"	"17112"	"17112"	"17083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.5"	""	"53.9"	""	"60.4"	""	"109.5"	""	"95.9"	"97.7"	""	"914"	"39"	"36.000"	"29.000"	"0.00591447499542644"	"16"	"0.0009404"	"0.009805"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAmAk.[E]"	"N-Term(TMT6plex); M12(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"989.57550"	"1978.14372"	"1978.14474"	"-0.51"	"-0.00051"	"13/122"	"13"	"122"	"324255.19909668"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"55.8994"	"17283"	"17283"	"17253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.4"	""	"22.7"	""	"29.1"	""	"46.4"	""	"45.7"	"42.8"	""	"912"	"36"	"36.000"	"29.000"	"0.0106896833978588"	"16"	"0.00119"	"0.0163"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAmAk.[E]"	"N-Term(TMT6plex); M12(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"660.05389"	"1978.14713"	"1978.14474"	"1.21"	"0.00080"	"11/122"	"11"	"122"	"7351133.05163574"	"HCD"	"MS2"	"0"	"161.9"	"100.000"	"55.8396"	"17258"	"17258"	"17237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.2"	""	"211.8"	""	"218.4"	""	"310.9"	""	"305.0"	"289.7"	""	"858"	"33"	"36.000"	"29.000"	"0.02395837135421"	"15"	"0"	"1.583E-05"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPITYPQGLAMAK"	"[K].lTPITYPQGLAmAk.[E]"	"N-Term(TMT6plex); M12(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"660.05414"	"1978.14786"	"1978.14474"	"1.58"	"0.00104"	"13/122"	"13"	"122"	"6674867.9128418"	"HCD"	"MS2"	"7.309196"	"135.4"	"85.066"	"55.6706"	"17135"	"17135"	"17115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.7"	""	"171.1"	""	"184.2"	""	"254.0"	"3.1"	"246.8"	"265.1"	""	"850"	"42"	"36.000"	"29.000"	"0.00295385334975239"	"15"	"0"	"5.735E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVSLGNVLAVAYATK"	"[K].nVSLGNVLAVAYATk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"989.59009"	"1978.17290"	"1978.17373"	"-0.42"	"-0.00042"	"11/162"	"11"	"162"	"137431.139587402"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"74.8200"	"24943"	"24943"	"24913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.1"	""	"14.6"	""	"21.7"	""	"17.4"	""	"23.5"	"25.2"	""	"668"	"32"	"35.000"	"28.000"	"0.0206417477646231"	"15"	"0.0001889"	"0.0004611"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTYSMSSTLSLTK"	"[K].dSTYSMSSTLSLTk.[VA]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.8955"	"0.0000"	"1"	"1"	"1"	"990.02258"	"1979.03789"	"1979.04073"	"-1.43"	"-0.00142"	"15/128"	"15"	"128"	"656382.65045166"	"HCD"	"MS2"	"100"	"68.4"	"100.000"	"50.0010"	"14891"	"14891"	"14862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.9"	""	"75.8"	""	"66.7"	""	"118.1"	"1.8"	"179.8"	"156.1"	""	"1225"	"67"	"37.000"	"30.000"	"1.22209816791844E-05"	"24"	"0"	"4.808E-06"	"1.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTYSMSSTLSLTK"	"[K].dSTYSMSSTLSLTk.[VA]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"990.02380"	"1979.04033"	"1979.04073"	"-0.20"	"-0.00020"	"21/128"	"21"	"128"	"2429514.58215332"	"HCD"	"MS2"	"0"	"207.1"	"100.000"	"49.5255"	"14650"	"14650"	"14623"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.6"	""	"185.4"	""	"209.3"	""	"384.9"	"2.0"	"508.5"	"490.5"	""	"1213"	"92"	"37.000"	"30.000"	"3.888936081989E-08"	"18"	"0"	"3.429E-07"	"1.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTYSMSSTLSLTK"	"[K].dSTYSMSSTLSLTk.[VA]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8793"	"0.0000"	"1"	"1"	"1"	"660.35175"	"1979.04068"	"1979.04073"	"-0.02"	"-0.00002"	"11/128"	"11"	"128"	"21941031.0594482"	"HCD"	"MS2"	"16.25623"	"454.4"	"70.181"	"49.7865"	"14802"	"14802"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"452.8"	""	"446.4"	""	"503.5"	""	"811.4"	"1.9"	"1095.6"	"1015.3"	""	"1222"	"58"	"37.000"	"30.000"	"9.48508463084387E-05"	"24"	"0"	"1.042E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTYSMSSTLSLTK"	"[K].dSTYSMSSTLSLTk.[VA]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8793"	"0.0000"	"1"	"1"	"1"	"660.35181"	"1979.04087"	"1979.04073"	"0.07"	"0.00005"	"16/128"	"16"	"128"	"18481511.8165283"	"HCD"	"MS2"	"18.8633"	"509.2"	"100.000"	"49.5118"	"14644"	"14644"	"14623"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"534.6"	""	"504.0"	""	"560.1"	""	"925.9"	"7.4"	"1199.9"	"1114.6"	""	"1222"	"58"	"37.000"	"30.000"	"9.75082158961644E-05"	"23"	"0"	"5.518E-06"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMLFPSFIHSQK"	"[R].dAMLFPSFIHSQk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"660.36603"	"1979.08353"	"1979.08247"	"0.53"	"0.00035"	"14/118"	"14"	"118"	"7252439.16748047"	"HCD"	"MS2"	"23.50649"	"202.7"	"100.000"	"56.8554"	"17673"	"17673"	"17653"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"373.8"	""	"246.8"	""	"259.7"	""	"282.0"	""	"394.9"	"363.3"	""	"1206"	"32"	"37.000"	"30.000"	"0.0393837723246426"	"22"	"0"	"2.604E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMLFPSFIHSQK"	"[R].dAMLFPSFIHSQk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"660.36621"	"1979.08408"	"1979.08247"	"0.81"	"0.00053"	"16/118"	"16"	"118"	"7053987.45294189"	"HCD"	"MS2"	"31.24528"	"205.6"	"100.000"	"56.6340"	"17529"	"17529"	"17499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"388.6"	""	"251.0"	""	"261.4"	""	"275.5"	"0.4"	"390.3"	"379.4"	""	"1217"	"30"	"37.000"	"30.000"	"0.0561384713423673"	"16"	"0"	"1.136E-05"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGWMALDEFLVK"	"[R].vGGGWMALDEFLVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"660.70514"	"1980.10086"	"1980.10288"	"-1.02"	"-0.00067"	"10/106"	"10"	"106"	"239357.12890625"	"HCD"	"MS2"	"29.791"	"7.4"	"100.000"	"89.3226"	"30818"	"30818"	"30807"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"18.1"	""	"9.3"	""	"8.1"	""	"10.6"	"16.5"	""	"1202"	"32"	"37.000"	"30.000"	"0.036130541622745"	"23"	"0.0002277"	"0.001237"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGWMALDEFLVK"	"[R].vGGGWMALDEFLVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"660.70581"	"1980.10288"	"1980.10288"	"0.00"	"0.00000"	"8/106"	"8"	"106"	"214090.522338867"	"HCD"	"MS2"	"29.91437"	"8.1"	"100.000"	"89.1854"	"30724"	"30724"	"30711"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"21.4"	""	"9.9"	""	"8.4"	""	"13.2"	"15.8"	""	"1199"	"30"	"37.000"	"30.000"	"0.055563447911592"	"21"	"0.0001889"	"0.0009221"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMLELLNQLDGFDSR"	"[R].tMLELLNQLDGFDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"661.01306"	"1981.02463"	"1981.02619"	"-0.79"	"-0.00052"	"6/154"	"6"	"154"	"108530.139343262"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"92.5022"	"31934"	"31934"	"31925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.5"	""	"2.8"	""	"6.4"	""	"3.7"	""	"6.7"	"7.3"	""	"1138"	"19"	"37.000"	"30.000"	"0.70163665010725"	"16"	"0.0002277"	"0.001213"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMLELLNQLDGFDSR"	"[R].tMLELLNQLDGFDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"661.01355"	"1981.02610"	"1981.02619"	"-0.05"	"-0.00003"	"7/154"	"7"	"154"	"112870.425476074"	"HCD"	"MS2"	"9.618757"	"3.8"	"100.000"	"92.7817"	"32021"	"32021"	"32012"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	"3.1"	""	"6.2"	""	"8.1"	""	"8.5"	"7.0"	""	"1137"	"7"	"37.000"	"30.000"	"11.1104198060831"	"13"	"0.0006037"	"0.00421"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMLELLNQLDGFDSR"	"[R].tMLELLNQLDGFDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"661.01355"	"1981.02610"	"1981.02619"	"-0.05"	"-0.00003"	"5/154"	"5"	"154"	"115054.280639648"	"HCD"	"MS2"	"8.506275"	"3.1"	"100.000"	"92.3237"	"31850"	"31850"	"31845"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"6.2"	""	"4.8"	""	"5.2"	""	"6.7"	"7.1"	""	"1137"	"13"	"37.000"	"30.000"	"2.74618928959611"	"18"	"0.0004166"	"0.002486"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMLELLNQLDGFDSR"	"[R].tMLELLNQLDGFDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"661.01392"	"1981.02719"	"1981.02619"	"0.51"	"0.00033"	"5/154"	"5"	"154"	"188215.093811035"	"HCD"	"MS2"	"19.86828"	"4.1"	"100.000"	"92.5862"	"31932"	"31932"	"31928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.4"	""	"7.7"	""	"5.4"	""	"8.2"	""	"6.8"	"8.5"	""	"1145"	"8"	"37.000"	"30.000"	"9.30626662667151"	"13"	"0.0002277"	"0.001346"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMLELLNQLDGFDSR"	"[R].tMLELLNQLDGFDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"991.01727"	"1981.02727"	"1981.02619"	"0.54"	"0.00054"	"7/154"	"7"	"154"	"52457.122253418"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"92.4080"	"31879"	"31879"	"31870"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.8"	""	""	""	""	""	""	""	"4.4"	"2.5"	""	"1145"	"15"	"37.000"	"30.000"	"1.97594790769778"	"26"	"0.0003839"	"0.001988"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLHPIIPEQSTFK"	"[R].lLHPIIPEQSTFk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"661.06805"	"1981.18961"	"1981.18865"	"0.48"	"0.00032"	"14/110"	"14"	"110"	"3224899.47479248"	"HCD"	"MS2"	"0"	"114.9"	"100.000"	"51.0693"	"15275"	"15275"	"15250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.6"	""	"126.4"	""	"136.0"	""	"221.9"	""	"241.7"	"219.2"	""	"495"	"31"	"33.000"	"26.000"	"0.0175620497570939"	"14"	"0"	"0.0001479"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLHPIIPEQSTFK"	"[R].lLHPIIPEQSTFk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"661.06836"	"1981.19052"	"1981.18865"	"0.94"	"0.00062"	"14/110"	"14"	"110"	"3021395.1696167"	"HCD"	"MS2"	"2.58578"	"110.4"	"100.000"	"51.2787"	"15411"	"15411"	"15382"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.4"	""	"120.6"	""	"128.2"	""	"220.5"	"1.1"	"224.0"	"215.8"	""	"497"	"32"	"33.000"	"26.000"	"0.0155713545371075"	"18"	"7.476E-05"	"0.0002021"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIELPFGDEEALK"	"[R].yIELPFGDEEALk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q02765"	"Cathepsin S OS=Rattus norvegicus OX=10116 GN=Ctss PE=2 SV=1"	"Q02765"	"Cathepsin S OS=Rattus norvegicus OX=10116 GN=Ctss PE=2 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"661.36798"	"1982.08939"	"1982.08867"	"0.37"	"0.00024"	"7/110"	"7"	"110"	"687817.961669922"	"HCD"	"MS2"	"19.765"	"25.5"	"100.000"	"72.9542"	"24233"	"24233"	"24207"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.3"	""	"27.3"	""	"32.6"	""	"43.8"	""	"52.3"	"52.1"	""	"1180"	"23"	"37.000"	"30.000"	"0.276599895465706"	"18"	"0.0001889"	"0.0005435"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIELPFGDEEALK"	"[R].yIELPFGDEEALk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q02765"	"Cathepsin S OS=Rattus norvegicus OX=10116 GN=Ctss PE=2 SV=1"	"Q02765"	"Cathepsin S OS=Rattus norvegicus OX=10116 GN=Ctss PE=2 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"661.36884"	"1982.09195"	"1982.08867"	"1.66"	"0.00110"	"10/110"	"10"	"110"	"635400.615844727"	"HCD"	"MS2"	"0"	"26.9"	"100.000"	"72.9376"	"24175"	"24175"	"24145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.0"	""	"24.5"	""	"33.6"	""	"45.0"	""	"61.3"	"59.4"	""	"1147"	"24"	"37.000"	"30.000"	"0.224663966521314"	"22"	"0.0001889"	"0.0004218"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANNTPYGLAAGVFTK"	"[R].aNNTPYGLAAGVFTk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"661.37543"	"1982.11173"	"1982.11113"	"0.30"	"0.00020"	"11/158"	"11"	"158"	"2390059.18920898"	"HCD"	"MS2"	"30.83056"	"85.8"	"100.000"	"59.1501"	"18606"	"18606"	"18581"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.6"	""	"110.0"	""	"125.2"	""	"143.2"	""	"159.8"	"167.3"	""	"1049"	"38"	"37.000"	"30.000"	"0.00770451832624208"	"17"	"0"	"3.104E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANNTPYGLAAGVFTK"	"[R].aNNTPYGLAAGVFTk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"661.37561"	"1982.11228"	"1982.11113"	"0.58"	"0.00038"	"12/158"	"12"	"158"	"2429826.47198486"	"HCD"	"MS2"	"17.21262"	"92.2"	"100.000"	"59.0125"	"18497"	"18497"	"18473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.8"	""	"124.8"	""	"122.2"	""	"155.9"	""	"164.7"	"171.6"	""	"1048"	"37"	"37.000"	"30.000"	"0.0106250574502915"	"21"	"0"	"3.74E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSEFPYIEAEVK"	"[R].lVSEFPYIEAEVk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"661.37787"	"1982.11905"	"1982.12505"	"-3.03"	"-0.00200"	"11/112"	"11"	"112"	"501155.106811523"	"HCD"	"MS2"	"27.61355"	"26.2"	"100.000"	"72.2190"	"23933"	"23933"	"23903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.5"	""	"34.5"	""	"35.6"	""	"42.8"	"0.8"	"48.6"	"48.4"	""	"1028"	"13"	"37.000"	"30.000"	"2.48864596938227"	"14"	"0.0001889"	"0.0006175"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEPNDADIALLK"	"[K].lVLEPNDADIALLk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.7551"	"0.0000"	"1"	"1"	"1"	"661.40198"	"1982.19138"	"1982.19380"	"-1.22"	"-0.00081"	"15/130"	"15"	"130"	"6502407.5592041"	"HCD"	"MS2"	"35.42373"	"160.9"	"100.000"	"74.8616"	"25011"	"25011"	"24991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"266.4"	""	"269.3"	""	"198.1"	""	"266.5"	"0.5"	"263.2"	"257.1"	""	"412"	"49"	"33.000"	"26.000"	"0.000237611371111145"	""	"0"	"3.77E-06"	"1.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEPNDADIALLK"	"[K].lVLEPNDADIALLk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"991.60004"	"1982.19280"	"1982.19380"	"-0.51"	"-0.00050"	"8/130"	"8"	"130"	"141955.193237305"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"75.2191"	"25157"	"25157"	"25135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.3"	""	"13.2"	""	"15.2"	""	"17.5"	""	"17.6"	"27.1"	""	"403"	"14"	"33.000"	"26.000"	"0.778529458763949"	"25"	"0.0005564"	"0.003508"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEPNDADIALLK"	"[K].lVLEPNDADIALLk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"661.40253"	"1982.19303"	"1982.19380"	"-0.39"	"-0.00026"	"13/130"	"13"	"130"	"2194205.70196533"	"HCD"	"MS2"	"18.43244"	"70.1"	"100.000"	"75.1870"	"25092"	"25092"	"25073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.0"	""	"101.1"	""	"81.5"	""	"110.7"	"0.8"	"125.9"	"138.5"	""	"396"	"39"	"32.000"	"25.000"	"0.00276480935489076"	"19"	"0"	"6.619E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEPNDADIALLK"	"[K].lVLEPNDADIALLk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"991.60022"	"1982.19316"	"1982.19380"	"-0.32"	"-0.00032"	"6/130"	"6"	"130"	"308197.489196777"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"75.1549"	"25079"	"25079"	"25057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.7"	""	"27.3"	""	"24.0"	""	"33.7"	""	"37.9"	"40.1"	""	"397"	"33"	"32.000"	"25.000"	"0.00985735758078918"	"25"	"0.0001889"	"0.0005453"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEPNDADIALLK"	"[K].lVLEPNDADIALLk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"661.40265"	"1982.19339"	"1982.19380"	"-0.20"	"-0.00014"	"14/130"	"14"	"130"	"2171340.02294922"	"HCD"	"MS2"	"14.02811"	"62.7"	"100.000"	"75.1755"	"25139"	"25139"	"25119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.1"	""	"81.6"	""	"77.9"	""	"106.8"	""	"116.6"	"128.6"	""	"395"	"32"	"32.000"	"25.000"	"0.0134142717441894"	"17"	"0"	"2.501E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEPNDADIALLK"	"[K].lVLEPNDADIALLk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"661.40283"	"1982.19394"	"1982.19380"	"0.07"	"0.00005"	"15/130"	"15"	"130"	"6424284.84783936"	"HCD"	"MS2"	"32.06202"	"161.3"	"100.000"	"74.8708"	"24963"	"24963"	"24945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.0"	""	"253.9"	""	"206.4"	""	"268.7"	"2.2"	"273.1"	"251.1"	""	"393"	"49"	"32.000"	"25.000"	"0.000228224652619627"	"19"	"0"	"9.979E-06"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEPNDADIALLK"	"[K].lVLEPNDADIALLk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"991.60071"	"1982.19414"	"1982.19380"	"0.17"	"0.00017"	"11/130"	"11"	"130"	"1245998.44470215"	"HCD"	"MS2"	"0"	"75.1"	"100.000"	"74.9075"	"25030"	"25030"	"25007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.8"	""	"111.4"	""	"94.4"	""	"126.9"	"2.2"	"123.8"	"124.6"	""	"393"	"80"	"32.000"	"25.000"	"1.89828997721498E-07"	""	"0"	"2.1E-07"	"1.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLEPNDADIALLK"	"[K].lVLEPNDADIALLk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"991.60132"	"1982.19536"	"1982.19380"	"0.79"	"0.00078"	"11/130"	"11"	"130"	"630775.246582031"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"74.8570"	"24958"	"24958"	"24929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.0"	""	"59.5"	""	"46.7"	""	"61.4"	""	"71.4"	"71.1"	""	"375"	"68"	"32.000"	"25.000"	"2.83792734081789E-06"	""	"0"	"7.142E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFAELWAFDAAQGK"	"[R].aFAELWAFDAAQGk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"992.03986"	"1983.07244"	"1983.07402"	"-0.80"	"-0.00079"	"14/118"	"14"	"118"	"1120961.49432373"	"HCD"	"MS2"	"4.255948"	"80.6"	"100.000"	"77.6447"	"26135"	"26135"	"26117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.1"	""	"132.4"	""	"93.2"	""	"137.5"	""	"142.6"	"140.9"	""	"1267"	"47"	"38.000"	"31.000"	"0.00122955120345503"	"21"	"0"	"3.615E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFAELWAFDAAQGK"	"[R].aFAELWAFDAAQGk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"992.04016"	"1983.07305"	"1983.07402"	"-0.49"	"-0.00049"	"13/118"	"13"	"118"	"125765.002258301"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"77.9584"	"26213"	"26213"	"26185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.4"	""	"12.0"	""	"13.8"	""	"15.1"	""	"19.8"	"17.2"	""	"1272"	"39"	"38.000"	"31.000"	"0.0086388735202943"	"24"	"0"	"8.343E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFAELWAFDAAQGK"	"[R].aFAELWAFDAAQGk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"661.69598"	"1983.07340"	"1983.07402"	"-0.31"	"-0.00021"	"15/118"	"15"	"118"	"7365244.6673584"	"HCD"	"MS2"	"2.109667"	"166.8"	"100.000"	"77.5756"	"26107"	"26107"	"26085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.7"	""	"269.9"	""	"180.4"	""	"271.0"	""	"327.0"	"306.4"	""	"1267"	"39"	"38.000"	"31.000"	"0.00870455591170429"	"20"	"0"	"1.01E-05"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFAELWAFDAAQGK"	"[R].aFAELWAFDAAQGk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"0"	"3"	"3"	"0.7547"	"0.0000"	"1"	"1"	"1"	"661.69617"	"1983.07395"	"1983.07402"	"-0.04"	"-0.00002"	"10/118"	"10"	"118"	"4244546.56445313"	"HCD"	"MS2"	"3.606963"	"105.6"	"100.000"	"77.5858"	"26060"	"26060"	"26041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.2"	""	"150.0"	""	"122.1"	""	"188.7"	""	"191.1"	"197.1"	""	"1266"	"53"	"38.000"	"31.000"	"0.000305072955896706"	"29"	"0"	"1.811E-05"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFAELWAFDAAQGK"	"[R].aFAELWAFDAAQGk.[C]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"992.04065"	"1983.07402"	"1983.07402"	"0.00"	"0.00000"	"15/118"	"15"	"118"	"724031.537475586"	"HCD"	"MS2"	"0"	"57.3"	"100.000"	"77.6458"	"26085"	"26085"	"26057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.5"	""	"84.5"	""	"55.9"	""	"95.0"	""	"117.7"	"99.4"	""	"1266"	"48"	"38.000"	"31.000"	"0.000998627933719687"	"27"	"0"	"1.571E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGHFEDLLLAVVR"	"[K].gELSGHFEDLLLAVVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"662.03986"	"1984.10501"	"1984.10649"	"-0.74"	"-0.00049"	"14/134"	"14"	"134"	"1645505.54577637"	"HCD"	"MS2"	"8.548933"	"22.7"	"100.000"	"79.8311"	"27027"	"27027"	"27007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.4"	""	"26.6"	""	"24.0"	""	"46.9"	""	"47.8"	"49.1"	""	"1106"	"51"	"37.000"	"30.000"	"0.000399691701392"	"22"	"0"	"4.917E-06"	"1.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGHFEDLLLAVVR"	"[K].gELSGHFEDLLLAVVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.03992"	"1984.10520"	"1984.10649"	"-0.65"	"-0.00043"	"7/134"	"7"	"134"	"324302.267822266"	"HCD"	"MS2"	"74.75149"	"16.5"	"100.000"	"80.9622"	"27438"	"27438"	"27408"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.8"	""	"23.5"	""	"24.8"	""	"30.1"	""	"30.3"	"32.4"	""	"1106"	"3"	"37.000"	"30.000"	"25.2769768857026"	"13"	"0.0001889"	"0.0008243"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGHFEDLLLAVVR"	"[K].gELSGHFEDLLLAVVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"662.03992"	"1984.10520"	"1984.10649"	"-0.65"	"-0.00043"	"13/134"	"13"	"134"	"2200475.40093994"	"HCD"	"MS2"	"5.445243"	"26.6"	"100.000"	"79.8825"	"26997"	"26997"	"26977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.1"	""	"28.0"	""	"33.2"	""	"50.3"	"0.9"	"56.4"	"58.9"	""	"1106"	"39"	"37.000"	"30.000"	"0.00634928952687776"	"18"	"0"	"7.704E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGHFEDLLLAVVR"	"[K].gELSGHFEDLLLAVVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"662.04004"	"1984.10556"	"1984.10649"	"-0.47"	"-0.00031"	"8/134"	"8"	"134"	"294219.279541016"	"HCD"	"MS2"	"46.00992"	"13.7"	"100.000"	"81.0218"	"27513"	"27513"	"27486"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.8"	""	"17.8"	""	"18.2"	""	"26.5"	""	"23.4"	"26.8"	""	"1115"	"9"	"37.000"	"30.000"	"7.85678505120195"	"16"	"0.0001889"	"0.0006359"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGHFEDLLLAVVR"	"[K].gELSGHFEDLLLAVVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"662.04004"	"1984.10556"	"1984.10649"	"-0.47"	"-0.00031"	"14/134"	"14"	"134"	"1776841.18939209"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"80.1402"	"27153"	"27153"	"27135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.1"	""	"26.3"	""	"26.1"	""	"48.3"	""	"41.4"	"42.1"	""	"1115"	"51"	"37.000"	"30.000"	"0.000491184746701968"	"19"	"0"	"6.498E-06"	"1.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGHFEDLLLAVVR"	"[K].gELSGHFEDLLLAVVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"662.04010"	"1984.10575"	"1984.10649"	"-0.38"	"-0.00025"	"12/134"	"12"	"134"	"469251.099365234"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"80.5170"	"27256"	"27256"	"27233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.3"	""	"14.0"	""	"19.5"	""	"21.5"	""	"24.3"	"30.0"	""	"1107"	"31"	"37.000"	"30.000"	"0.0403754731925904"	"16"	"0"	"2.587E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGHFEDLLLAVVR"	"[K].gELSGHFEDLLLAVVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.8852"	"0.0000"	"1"	"1"	"1"	"662.04034"	"1984.10648"	"1984.10649"	"-0.01"	"0.00000"	"10/134"	"10"	"134"	"2043965.04449463"	"HCD"	"MS2"	"3.058212"	"23.5"	"100.000"	"80.1873"	"27122"	"27122"	"27105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.0"	""	"26.0"	""	"34.3"	""	"45.9"	""	"55.0"	"41.8"	""	"1105"	"61"	"37.000"	"30.000"	"4.27890143285892E-05"	"23"	"0"	"2.727E-06"	"1.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGHFEDLLLAVVR"	"[K].gELSGHFEDLLLAVVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"662.04077"	"1984.10776"	"1984.10649"	"0.64"	"0.00042"	"12/134"	"12"	"134"	"450086.159667969"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"80.4679"	"27287"	"27287"	"27263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.1"	""	"18.8"	""	"18.0"	""	"24.0"	""	"22.5"	"27.7"	""	"1098"	"34"	"37.000"	"30.000"	"0.0235273137698194"	"18"	"0"	"7.119E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QLAEFTSMKPK"	"[K].qLAEFTSmkPk.[K]"	"N-Term(TMT6plex); Q1(Deamidated); M8(Oxidation); K9(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P0C6P6"	"Transcription factor YY2 OS=Rattus norvegicus OX=10116 GN=Yy2 PE=3 SV=1"	"P0C6P6; Q2FAY8"	"Transcription factor YY2 OS=Rattus norvegicus OX=10116 GN=Yy2 PE=3 SV=1; Transcription factor YY2 OS=Rattus rattus OX=10117 GN=Yy2 PE=3 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"6"	"992.56909"	"1984.13091"	"1984.13921"	"-4.19"	"-0.00415"	"3/106"	"3"	"106"	"46903.6878662109"	"HCD"	"MS2"	"0"	"0.8"	"100.000"	"89.4490"	"30823"	"30823"	"30808"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.5"	""	""	""	""	""	"2.8"	""	"2.7"	""	""	"962"	"0"	"36.000"	"29.000"	"45.935143387631"	"13"	"0.007843"	"0.3179"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAEFTSMKPK"	"[K].qLAEFTSmkPk.[K]"	"N-Term(TMT6plex); Q1(Deamidated); M8(Oxidation); K9(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P0C6P6"	"Transcription factor YY2 OS=Rattus norvegicus OX=10116 GN=Yy2 PE=3 SV=1"	"P0C6P6; Q2FAY8"	"Transcription factor YY2 OS=Rattus norvegicus OX=10116 GN=Yy2 PE=3 SV=1; Transcription factor YY2 OS=Rattus rattus OX=10117 GN=Yy2 PE=3 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"5"	"992.56915"	"1984.13103"	"1984.13921"	"-4.12"	"-0.00409"	"3/106"	"3"	"106"	"51932.6108398438"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"89.5342"	"30895"	"30895"	"30885"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.5"	""	""	""	"7.0"	""	""	"4.2"	""	"959"	"3"	"36.000"	"29.000"	"23.7021974410187"	"14"	"0.007224"	"0.2692"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLAEFTSMKPK"	"[K].qLAEFTSmkPk.[K]"	"N-Term(TMT6plex); Q1(Deamidated); M8(Oxidation); K9(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P0C6P6"	"Transcription factor YY2 OS=Rattus norvegicus OX=10116 GN=Yy2 PE=3 SV=1"	"P0C6P6; Q2FAY8"	"Transcription factor YY2 OS=Rattus norvegicus OX=10116 GN=Yy2 PE=3 SV=1; Transcription factor YY2 OS=Rattus rattus OX=10117 GN=Yy2 PE=3 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"5"	"992.56976"	"1984.13225"	"1984.13921"	"-3.51"	"-0.00348"	"3/106"	"3"	"106"	"45035.6619262695"	"HCD"	"MS2"	"0"	"0.9"	"100.000"	"89.8938"	"31030"	"31030"	"31022"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	"6.4"	""	""	"2.6"	""	"944"	"3"	"36.000"	"29.000"	"21.624297052926"	"14"	"0.006033"	"0.2112"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RNPFAFAPVLLNVAAR"	"[R].rNPFAFAPVLLNVAAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.39227"	"1985.16227"	"1985.16462"	"-1.18"	"-0.00078"	"13/152"	"13"	"152"	"3235947.78924561"	"HCD"	"MS2"	"5.529142"	"41.7"	"100.000"	"67.9139"	"22175"	"22175"	"22154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.3"	""	"71.8"	""	"61.2"	""	"65.2"	""	"65.1"	"62.6"	""	"653"	"62"	"35.000"	"28.000"	"2.09354926755055E-05"	"16"	"0"	"3.153E-07"	"1.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RNPFAFAPVLLNVAAR"	"[R].rNPFAFAPVLLNVAAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.39288"	"1985.16410"	"1985.16462"	"-0.26"	"-0.00017"	"9/152"	"9"	"152"	"2719189.99829102"	"HCD"	"MS2"	"14.75463"	"40.7"	"100.000"	"68.0513"	"22180"	"22180"	"22154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.2"	""	"64.6"	""	"62.2"	""	"67.6"	"1.6"	"65.3"	"59.9"	""	"629"	"51"	"34.000"	"27.000"	"0.000250969329145779"	"16"	"0"	"8.87E-08"	"1.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQSPNSYFMDVK"	"[R].lVQSPNSYFMDVk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"P24051; Q71TY3"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3; 40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.69678"	"1986.07578"	"1986.07706"	"-0.64"	"-0.00043"	"14/130"	"14"	"130"	"4749846.95788574"	"HCD"	"MS2"	"1.488567"	"144.3"	"100.000"	"61.0928"	"19399"	"19399"	"19379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"280.8"	""	"248.2"	""	"251.3"	""	"156.7"	"2.9"	"210.5"	"210.5"	""	"1142"	"49"	"37.000"	"30.000"	"0.000802853136278181"	"16"	"0"	"8.398E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQSPNSYFMDVK"	"[R].lVQSPNSYFMDVk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"P24051; Q71TY3"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3; 40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"993.54205"	"1986.07683"	"1986.07706"	"-0.11"	"-0.00011"	"14/130"	"14"	"130"	"770344.10144043"	"HCD"	"MS2"	"0"	"67.5"	"100.000"	"61.0373"	"19377"	"19377"	"19347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.9"	""	"136.7"	""	"123.0"	""	"54.9"	"2.0"	"86.1"	"79.4"	""	"1144"	"36"	"37.000"	"30.000"	"0.0144011120267806"	"16"	"0.0001889"	"0.0006075"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQSPNSYFMDVK"	"[R].lVQSPNSYFMDVk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"P24051; Q71TY3"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3; 40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"993.54315"	"1986.07903"	"1986.07706"	"0.99"	"0.00099"	"17/130"	"17"	"130"	"843230.878295898"	"HCD"	"MS2"	"0"	"73.0"	"100.000"	"60.8992"	"19267"	"19267"	"19241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.1"	""	"139.2"	""	"144.5"	""	"63.9"	"0.6"	"91.1"	"85.5"	""	"1168"	"43"	"37.000"	"30.000"	"0.00305079374375486"	"15"	"0.0001889"	"0.0004253"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQSPNSYFMDVK"	"[R].lVQSPNSYFMDVk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"P24051; Q71TY3"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3; 40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.69794"	"1986.07926"	"1986.07706"	"1.11"	"0.00073"	"14/130"	"14"	"130"	"4262932.60150146"	"HCD"	"MS2"	"4.953475"	"140.8"	"100.000"	"60.8901"	"19263"	"19263"	"19241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.4"	""	"249.8"	""	"256.8"	""	"141.6"	"4.4"	"187.6"	"201.3"	""	"1167"	"50"	"37.000"	"30.000"	"0.000576820730732324"	"16"	"0.0001859"	"0.00036"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANNTTYGLAAGVFTK"	"[R].aNNTTYGLAAGVFTk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"662.70587"	"1986.10306"	"1986.10605"	"-1.50"	"-0.00100"	"10/158"	"10"	"158"	"8141930.09661865"	"HCD"	"MS2"	"0"	"191.8"	"100.000"	"54.2999"	"16628"	"16628"	"16605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.0"	""	"306.1"	""	"323.6"	""	"269.8"	"1.4"	"284.8"	"319.3"	""	"1112"	"78"	"37.000"	"30.000"	"9.59565867946553E-07"	"24"	"0"	"2.806E-07"	"1.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANNTTYGLAAGVFTK"	"[R].aNNTTYGLAAGVFTk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"993.55518"	"1986.10307"	"1986.10605"	"-1.50"	"-0.00149"	"13/158"	"13"	"158"	"1294956.59405518"	"HCD"	"MS2"	"0"	"105.8"	"100.000"	"54.1579"	"16517"	"16517"	"16493"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.4"	""	"164.6"	""	"177.1"	""	"153.7"	"2.6"	"157.0"	"173.7"	""	"1112"	"115"	"37.000"	"30.000"	"1.75014806264033E-10"	"25"	"0"	"7.317E-08"	"1.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANNTTYGLAAGVFTK"	"[R].aNNTTYGLAAGVFTk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"993.55518"	"1986.10307"	"1986.10605"	"-1.50"	"-0.00149"	"17/158"	"17"	"158"	"1524134.56622314"	"HCD"	"MS2"	"0"	"126.6"	"100.000"	"54.3366"	"16643"	"16643"	"16621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"196.0"	""	"197.4"	""	"210.0"	""	"186.5"	"1.3"	"195.3"	"209.7"	""	"1112"	"71"	"37.000"	"30.000"	"4.00013631770056E-06"	"17"	"0"	"1.25E-06"	"1.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANNTTYGLAAGVFTK"	"[R].aNNTTYGLAAGVFTk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"662.70654"	"1986.10508"	"1986.10605"	"-0.49"	"-0.00032"	"12/158"	"12"	"158"	"7057419.16369629"	"HCD"	"MS2"	"0"	"184.3"	"100.000"	"54.1073"	"16496"	"16496"	"16477"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"271.9"	""	"293.7"	""	"293.2"	""	"287.9"	""	"277.6"	"318.5"	""	"1125"	"53"	"37.000"	"30.000"	"0.000258298882220738"	"22"	"0"	"2.586E-06"	"1.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANNTTYGLAAGVFTK"	"[R].aNNTTYGLAAGVFTk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"993.55688"	"1986.10649"	"1986.10605"	"0.22"	"0.00022"	"17/158"	"17"	"158"	"430608.038391113"	"HCD"	"MS2"	"0"	"42.5"	"100.000"	"54.6262"	"16761"	"16761"	"16741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.4"	""	"72.5"	""	"72.5"	""	"59.5"	""	"57.1"	"76.9"	""	"1111"	"59"	"37.000"	"30.000"	"7.33979724790642E-05"	"25"	"0"	"1.868E-06"	"1.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].IHFPLATYAPVISAEk.[A]"	"K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"662.71313"	"1986.12485"	"1986.12616"	"-0.66"	"-0.00044"	"11/136"	"11"	"136"	"3836814.01806641"	"HCD"	"MS2"	"0"	"122.2"	"100.000"	"57.3227"	"17864"	"17864"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"172.3"	""	"148.9"	""	"172.0"	""	"197.6"	"2.5"	"215.7"	"249.5"	""	"1009"	"30"	"37.000"	"30.000"	"0.0468663542130478"	"18"	"0"	"4.386E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].IHFPLATYAPVISAEk.[A]"	"K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.71338"	"1986.12558"	"1986.12616"	"-0.29"	"-0.00019"	"13/136"	"13"	"136"	"4791545.9395752"	"HCD"	"MS2"	"5.833042"	"146.0"	"100.000"	"56.9310"	"17704"	"17704"	"17685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"201.6"	""	"188.3"	""	"184.0"	""	"232.7"	"2.1"	"258.6"	"316.9"	""	"989"	"31"	"36.000"	"29.000"	"0.0437689669061348"	"14"	"0"	"3.062E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].IHFPLATYAPVISAEk.[A]"	"K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.71417"	"1986.12796"	"1986.12616"	"0.91"	"0.00060"	"15/136"	"15"	"136"	"5005907.28417969"	"HCD"	"MS2"	"10.30065"	"140.3"	"100.000"	"56.7723"	"17585"	"17585"	"17563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.7"	""	"182.6"	""	"173.3"	""	"212.7"	"0.5"	"256.9"	"312.1"	""	"1000"	"50"	"36.000"	"30.000"	"0.000460224785876586"	"16"	"0"	"1.305E-05"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].IHFPLATYAPVISAEk.[A]"	"K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"662.71423"	"1986.12815"	"1986.12616"	"1.00"	"0.00066"	"13/136"	"13"	"136"	"3728673.03796387"	"HCD"	"MS2"	"7.105559"	"122.7"	"100.000"	"57.1239"	"17729"	"17729"	"17707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.4"	""	"178.0"	""	"150.7"	""	"191.1"	"2.6"	"202.6"	"251.5"	""	"999"	"32"	"36.000"	"29.000"	"0.030236776693958"	"27"	"0"	"2.913E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLINNAGTLGDVSK"	"[R].lLLINNAGTLGDVSk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"993.60260"	"1986.19792"	"1986.19995"	"-1.02"	"-0.00101"	"18/142"	"18"	"142"	"578121.77722168"	"HCD"	"MS2"	"0"	"38.8"	"100.000"	"66.1684"	"21472"	"21472"	"21443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.8"	""	"57.8"	""	"65.0"	""	"48.9"	"1.6"	"49.5"	"61.0"	""	"457"	"81"	"33.000"	"26.000"	"1.62512287869786E-07"	""	"0"	"1.39E-06"	"1.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLINNAGTLGDVSK"	"[R].lLLINNAGTLGDVSk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"993.60291"	"1986.19853"	"1986.19995"	"-0.71"	"-0.00071"	"18/142"	"18"	"142"	"569301.421875"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"66.2526"	"21453"	"21453"	"21433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.1"	""	"70.3"	""	"56.5"	""	"61.5"	""	"52.7"	"56.2"	""	"436"	"86"	"33.000"	"26.000"	"5.33895786722154E-08"	""	"0"	"2.17E-06"	"1.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLINNAGTLGDVSK"	"[R].lLLINNAGTLGDVSk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"662.73779"	"1986.19883"	"1986.19995"	"-0.56"	"-0.00037"	"12/142"	"12"	"142"	"755362.712097168"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"66.5168"	"21614"	"21614"	"21587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.3"	""	"61.0"	""	"56.8"	""	"68.1"	""	"72.1"	"77.9"	""	"436"	"40"	"33.000"	"26.000"	"0.00216499298555763"	"16"	"0"	"0.0001613"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLINNAGTLGDVSK"	"[R].lLLINNAGTLGDVSk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"0"	"3"	"3"	"0.9886"	"0.0000"	"1"	"1"	"1"	"662.73779"	"1986.19883"	"1986.19995"	"-0.56"	"-0.00037"	"15/142"	"15"	"142"	"7030431.54168701"	"HCD"	"MS2"	"3.397091"	"162.7"	"100.000"	"66.1131"	"21449"	"21449"	"21427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"297.2"	""	"287.7"	""	"245.3"	""	"228.1"	"5.9"	"222.0"	"248.7"	""	"436"	"88"	"33.000"	"26.000"	"3.54369628753605E-08"	"19"	"0"	"4.492E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLINNAGTLGDVSK"	"[R].lLLINNAGTLGDVSk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"662.73792"	"1986.19919"	"1986.19995"	"-0.38"	"-0.00025"	"15/142"	"15"	"142"	"5029977.19476318"	"HCD"	"MS2"	"2.591825"	"139.9"	"100.000"	"66.1831"	"21425"	"21425"	"21401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.9"	""	"246.0"	""	"223.0"	""	"200.6"	""	"185.3"	"211.5"	""	"435"	"57"	"33.000"	"26.000"	"4.24091200447374E-05"	"23"	"0"	"5.465E-06"	"1.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLINNAGTLGDVSK"	"[R].lLLINNAGTLGDVSk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"662.73798"	"1986.19937"	"1986.19995"	"-0.29"	"-0.00019"	"15/142"	"15"	"142"	"1177449.11798096"	"HCD"	"MS2"	"0"	"50.2"	"100.000"	"66.4993"	"21554"	"21554"	"21529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.6"	""	"83.0"	""	"75.8"	""	"71.7"	"0.5"	"78.0"	"87.9"	""	"432"	"60"	"33.000"	"26.000"	"2.39581760096679E-05"	"21"	"0"	"1.503E-05"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSLETEEWFFK"	"[R].vNSLETEEWFFk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50545"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4"	"P50545"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.02179"	"1987.05082"	"1987.05770"	"-3.46"	"-0.00229"	"7/118"	"7"	"118"	"760348.883789063"	"HCD"	"MS2"	"39.65721"	"31.2"	"100.000"	"73.6782"	"24477"	"24477"	"24449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.7"	""	"40.1"	""	"44.5"	""	"53.1"	""	"64.4"	"53.6"	""	"1213"	"8"	"37.000"	"30.000"	"9.3935727937042"	"13"	"0.0001889"	"0.001034"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDVISIQPCPDVK"	"[R].lGDVISIQPcPDVk.[Y]"	"N-Term(TMT6plex); C10(Methylthio); K14(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"663.36877"	"1988.09177"	"1988.09608"	"-2.17"	"-0.00144"	"14/134"	"14"	"134"	"1161219.70861816"	"HCD"	"MS2"	"74.93756"	"40.7"	"100.000"	"72.3341"	"23980"	"23980"	"23951"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.3"	""	"59.3"	""	"58.7"	""	"53.1"	"0.5"	"67.5"	"75.1"	""	"1192"	"27"	"37.000"	"30.000"	"0.110725145523465"	"18"	"0"	"2.624E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQEYFDGNLKR"	"[R].fLQEYFDGNLkR.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"663.36951"	"1988.09397"	"1988.10057"	"-3.32"	"-0.00220"	"10/112"	"10"	"112"	"5217056.59643555"	"HCD"	"MS2"	"32.45936"	"241.7"	"95.648"	"57.0042"	"17680"	"17680"	"17659"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"483.4"	""	"387.6"	""	"397.4"	""	"336.0"	"1.5"	"315.0"	"357.6"	""	"1174"	"14"	"37.000"	"30.000"	"2.51557981473297"	"14"	"0.0001889"	"0.0004056"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDVISIQPCPDVK"	"[R].lGDVISIQPcPDVk.[Y]"	"N-Term(TMT6plex); C10(Methylthio); K14(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"663.37018"	"1988.09598"	"1988.09608"	"-0.05"	"-0.00003"	"13/134"	"13"	"134"	"1228916.94195557"	"HCD"	"MS2"	"35.98703"	"46.2"	"100.000"	"72.4187"	"23963"	"23963"	"23937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.6"	""	"68.9"	""	"68.8"	""	"60.0"	"0.7"	"75.8"	"85.3"	""	"1159"	"46"	"37.000"	"30.000"	"0.00130032957483211"	"25"	"0"	"3.535E-05"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLEEVNITDLNK"	"[K].lQLEEVNITDLnk.[N]"	"N-Term(TMT6plex); N12(Deamidated); K13(TMT6plex)"	"1"	"1"	"P25086"	"Interleukin-1 receptor antagonist protein OS=Rattus norvegicus OX=10116 GN=Il1rn PE=2 SV=1"	"P25086"	"Interleukin-1 receptor antagonist protein OS=Rattus norvegicus OX=10116 GN=Il1rn PE=2 SV=1"	"0"	"3"	"3"	"0.1250"	"0.0000"	"1"	"1"	"1"	"663.37543"	"1988.11173"	"1988.13159"	"-9.99"	"-0.00662"	"7/130"	"7"	"130"	"1063123.24139404"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"71.8801"	"23743"	"23743"	"23715"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.0"	""	"46.1"	""	"54.6"	""	"63.8"	"1.0"	"85.8"	"94.4"	""	"1096"	"8"	"37.000"	"30.000"	"9.41413796162358"	"20"	"0.005008"	"0.1509"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHLISMQSTIPYALR"	"[K].iHLISmQSTIPYALR.[I]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.37811"	"1988.11979"	"1988.12003"	"-0.13"	"-0.00008"	"8/136"	"8"	"136"	"6918372.22943115"	"HCD"	"MS2"	"33.25999"	"165.7"	"100.000"	"49.3583"	"14585"	"14585"	"14559"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.7"	""	"259.7"	""	"240.6"	""	"301.3"	""	"306.1"	"252.2"	""	"1034"	"62"	"37.000"	"30.000"	"2.99564636052698E-05"	"17"	"0"	"6.306E-06"	"1.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHLISMQSTIPYALR"	"[K].iHLISmQSTIPYALR.[I]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.37903"	"1988.12253"	"1988.12003"	"1.26"	"0.00083"	"10/136"	"10"	"136"	"5640698.36425781"	"HCD"	"MS2"	"22.38562"	"98.1"	"100.000"	"49.6058"	"14730"	"14730"	"14702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.6"	"2.0"	"134.6"	""	"140.5"	""	"194.0"	"0.8"	"178.6"	"161.1"	""	"1016"	"47"	"37.000"	"30.000"	"0.00106136243447385"	"15"	"0"	"1.167E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLDDKDYFLFR"	"[K].vVLDDkDYFLFR.[D]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.38025"	"1988.12619"	"1988.12572"	"0.24"	"0.00016"	"11/106"	"11"	"106"	"7124784.30181885"	"HCD"	"MS2"	"3.271391"	"400.4"	"100.000"	"65.2046"	"21078"	"21078"	"21059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"529.7"	""	"456.6"	""	"531.3"	""	"757.5"	"5.3"	"715.3"	"799.6"	""	"953"	"14"	"36.000"	"29.000"	"2.02331222220418"	"13"	"0.0001308"	"0.0002742"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAWGPGLHADAVLPVR"	"[R].sLAWGPGLHADAVLPVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q566E5"	"Protein O-glucosyltransferase 3 OS=Rattus norvegicus OX=10116 GN=Kdelc2 PE=2 SV=1"	"Q566E5"	"Protein O-glucosyltransferase 3 OS=Rattus norvegicus OX=10116 GN=Kdelc2 PE=2 SV=1"	"0"	"3"	"3"	"0.9839"	"0.0000"	"1"	"1"	"1"	"663.38043"	"1988.12674"	"1988.12790"	"-0.58"	"-0.00038"	"9/148"	"9"	"148"	"5658431.90942383"	"HCD"	"MS2"	"46.23848"	"137.6"	"100.000"	"56.5833"	"17562"	"17562"	"17541"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.8"	""	"195.7"	""	"197.2"	""	"211.0"	"0.3"	"249.5"	"269.4"	""	"958"	"62"	"36.000"	"29.000"	"3.0855707818177E-05"	"18"	"0"	"7.833E-07"	"1.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLDDKDYFLFR"	"[K].vVLDDkDYFLFR.[D]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.38049"	"1988.12693"	"1988.12572"	"0.61"	"0.00040"	"9/106"	"9"	"106"	"5920374.51593018"	"HCD"	"MS2"	"10.13852"	"339.4"	"100.000"	"65.2244"	"21034"	"21034"	"21017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"448.3"	""	"389.0"	""	"450.3"	""	"636.4"	""	"600.2"	"698.5"	""	"959"	"7"	"36.000"	"29.000"	"10.2515282191632"	"13"	"7.476E-05"	"0.0002047"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHLVPGAPFLLQALVR"	"[K].qHLVPGAPFLLQALVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.40356"	"1988.19614"	"1988.20067"	"-2.28"	"-0.00151"	"15/152"	"15"	"152"	"1464448.13861084"	"HCD"	"MS2"	"7.224417"	"38.3"	"100.000"	"70.9552"	"23417"	"23417"	"23386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.0"	""	"52.1"	""	"59.2"	""	"60.1"	"1.7"	"60.1"	"61.7"	""	"513"	"20"	"34.000"	"27.000"	"0.251239181257331"	"14"	"0.0001308"	"0.0002836"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHLVPGAPFLLQALVR"	"[K].qHLVPGAPFLLQALVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.40527"	"1988.20127"	"1988.20067"	"0.30"	"0.00020"	"17/152"	"17"	"152"	"2363175.14520264"	"HCD"	"MS2"	"8.712446"	"34.1"	"100.000"	"70.6372"	"23287"	"23287"	"23258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.2"	""	"55.7"	""	"46.5"	""	"50.3"	"1.2"	"61.8"	"57.0"	""	"472"	"40"	"33.000"	"26.000"	"0.00221774701293254"	"15"	"0"	"1.045E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHLVPGAPFLLQALVR"	"[K].qHLVPGAPFLLQALVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.40552"	"1988.20200"	"1988.20067"	"0.67"	"0.00044"	"15/152"	"15"	"152"	"911562.934936523"	"HCD"	"MS2"	"57.11691"	"25.1"	"100.000"	"71.0629"	"23409"	"23409"	"23379"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.7"	""	"31.7"	""	"41.2"	""	"36.7"	"0.2"	"45.1"	"52.6"	""	"462"	"44"	"33.000"	"26.000"	"0.000965188146953696"	"15"	"0"	"3.089E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHLVPGAPFLLQALVR"	"[K].qHLVPGAPFLLQALVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.40594"	"1988.20328"	"1988.20067"	"1.31"	"0.00087"	"16/152"	"16"	"152"	"2304493.26367188"	"HCD"	"MS2"	"4.69386"	"33.2"	"100.000"	"70.7333"	"23274"	"23274"	"23251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.8"	""	"45.9"	""	"49.3"	""	"54.5"	""	"61.9"	"59.2"	""	"452"	"49"	"33.000"	"26.000"	"0.000295194620717796"	"16"	"0"	"1.27E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMFQTVDLFEGK"	"[K].tDMFQTVDLFEGk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8630"	"0.0000"	"1"	"1"	"1"	"995.02209"	"1989.03691"	"1989.04034"	"-1.72"	"-0.00171"	"18/132"	"18"	"132"	"611573.936767578"	"HCD"	"MS2"	"0"	"58.6"	"100.000"	"75.3234"	"25148"	"25148"	"25121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.8"	""	"67.1"	""	"74.0"	""	"85.1"	"0.2"	"125.1"	"110.3"	""	"1282"	"73"	"38.000"	"31.000"	"3.3795434117203E-06"	"27"	"0"	"3.484E-06"	"1.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMFQTVDLFEGK"	"[K].tDMFQTVDLFEGk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"995.02289"	"1989.03850"	"1989.04034"	"-0.92"	"-0.00092"	"18/132"	"18"	"132"	"575798.278442383"	"HCD"	"MS2"	"0"	"56.6"	"100.000"	"75.6018"	"25313"	"25313"	"25295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.5"	""	"67.0"	""	"80.4"	""	"67.2"	"2.2"	"124.3"	"112.1"	""	"1270"	"81"	"38.000"	"31.000"	"5.64642709839796E-07"	"24"	"0"	"5.504E-06"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMFQTVDLFEGK"	"[K].tDMFQTVDLFEGk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.1818"	"0.0000"	"1"	"1"	"1"	"663.68469"	"1989.03952"	"1989.04034"	"-0.41"	"-0.00027"	"13/132"	"13"	"132"	"3807030.88446045"	"HCD"	"MS2"	"36.18789"	"96.8"	"100.000"	"75.7690"	"25330"	"25330"	"25313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.9"	""	"127.0"	""	"139.2"	""	"150.0"	""	"171.5"	"168.0"	""	"1275"	"11"	"38.000"	"31.000"	"4.97141695458578"	"22"	"0.0001889"	"0.000715"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMFQTVDLFEGK"	"[K].tDMFQTVDLFEGk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"995.02350"	"1989.03972"	"1989.04034"	"-0.31"	"-0.00031"	"20/132"	"20"	"132"	"851080.031921387"	"HCD"	"MS2"	"0"	"86.2"	"100.000"	"75.3136"	"25196"	"25196"	"25167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.0"	""	"84.5"	""	"120.8"	""	"108.4"	""	"195.0"	"162.0"	""	"1270"	"85"	"38.000"	"31.000"	"1.89135793268753E-07"	"23"	"0"	"1.188E-06"	"1.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMFQTVDLFEGK"	"[K].tDMFQTVDLFEGk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9710"	"0.0000"	"1"	"1"	"1"	"995.02380"	"1989.04033"	"1989.04034"	"0.00"	"0.00000"	"17/132"	"17"	"132"	"674991.459228516"	"HCD"	"MS2"	"0"	"67.2"	"100.000"	"75.6164"	"25267"	"25267"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.7"	""	"74.4"	""	"88.8"	""	"85.1"	""	"155.3"	"128.5"	""	"1278"	"69"	"38.000"	"31.000"	"7.31982769583698E-06"	"19"	"0"	"2.542E-06"	"1.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMFQTVDLFEGK"	"[K].tDMFQTVDLFEGk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.9804"	"0.0000"	"1"	"1"	"1"	"663.68512"	"1989.04081"	"1989.04034"	"0.24"	"0.00016"	"13/132"	"13"	"132"	"8009949.37072754"	"HCD"	"MS2"	"2.764456"	"204.5"	"100.000"	"75.3230"	"25200"	"25200"	"25183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.3"	""	"247.2"	""	"257.3"	""	"267.9"	""	"448.0"	"377.8"	""	"1288"	"51"	"38.000"	"31.000"	"0.000551932372328357"	"17"	"0"	"3.329E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMFQTVDLFEGK"	"[K].tDMFQTVDLFEGk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.68567"	"1989.04245"	"1989.04034"	"1.07"	"0.00071"	"16/132"	"16"	"132"	"16657044.2205811"	"HCD"	"MS2"	"3.027813"	"226.5"	"52.483"	"75.4550"	"25202"	"25202"	"25185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"363.6"	""	"280.8"	""	"303.7"	""	"291.6"	"0.6"	"511.6"	"396.8"	""	"1289"	"46"	"38.000"	"31.000"	"0.0017346941811309"	"16"	"0"	"2.009E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANQAADYFGDAFK"	"[K].lANQAADYFGDAFk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"663.68768"	"1989.04850"	"1989.04820"	"0.15"	"0.00010"	"16/134"	"16"	"134"	"3161776.28656006"	"HCD"	"MS2"	"44.69958"	"108.5"	"100.000"	"66.0608"	"21375"	"21375"	"21353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.4"	""	"143.0"	""	"150.4"	""	"148.5"	""	"213.0"	"216.5"	""	"1271"	"41"	"38.000"	"31.000"	"0.00548422867105909"	"18"	"0"	"1.411E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLYGTGSVAGVYLPGSR"	"[R].yLYGTGSVAGVYLPGSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9067"	"0.0000"	"1"	"1"	"1"	"995.03491"	"1989.06255"	"1989.06429"	"-0.88"	"-0.00087"	"19/150"	"19"	"150"	"516559.223144531"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"60.5187"	"19112"	"19112"	"19081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.6"	""	"47.1"	""	"46.4"	""	"24.5"	"0.9"	"38.2"	"43.0"	""	"1276"	"75"	"38.000"	"31.000"	"1.90029348197582E-06"	"24"	"0"	"1.098E-06"	"1.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLYGTGSVAGVYLPGSR"	"[R].yLYGTGSVAGVYLPGSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"995.03510"	"1989.06291"	"1989.06429"	"-0.69"	"-0.00069"	"18/150"	"18"	"150"	"584088.936096191"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"60.6476"	"19218"	"19218"	"19187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.7"	""	"55.5"	""	"53.2"	""	"34.0"	"1.3"	"37.1"	"49.6"	""	"1278"	"51"	"38.000"	"31.000"	"0.000515823184329008"	"18"	"0"	"3.776E-06"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLYGTGSVAGVYLPGSR"	"[R].yLYGTGSVAGVYLPGSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"663.69250"	"1989.06296"	"1989.06429"	"-0.67"	"-0.00044"	"14/150"	"14"	"150"	"2905142.6050415"	"HCD"	"MS2"	"22.54872"	"71.6"	"100.000"	"60.6384"	"19214"	"19214"	"19187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.5"	""	"101.3"	""	"99.4"	""	"101.7"	""	"139.6"	"150.8"	""	"1278"	"42"	"38.000"	"31.000"	"0.00395822846974064"	"20"	"0"	"7.385E-06"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLYGTGSVAGVYLPGSR"	"[R].yLYGTGSVAGVYLPGSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"663.69342"	"1989.06571"	"1989.06429"	"0.71"	"0.00047"	"13/150"	"13"	"150"	"2700784.77410889"	"HCD"	"MS2"	"8.955262"	"73.5"	"100.000"	"60.5373"	"19119"	"19119"	"19097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.8"	""	"105.4"	""	"112.3"	""	"96.6"	""	"130.3"	"159.1"	""	"1255"	"49"	"37.000"	"30.000"	"0.000777344858047806"	"22"	"0"	"5.555E-06"	"1.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLDPFLLFDEFK"	"[K].mLDPFLLFDEFk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.69788"	"1989.07907"	"1989.08074"	"-0.84"	"-0.00056"	"6/102"	"6"	"102"	"96849.9957275391"	"HCD"	"MS2"	"18.05732"	"4.1"	"100.000"	"99.5412"	"34041"	"34041"	"34036"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"5.1"	""	"9.2"	""	"6.9"	""	"5.4"	"8.6"	""	"1238"	"7"	"37.000"	"30.000"	"13.5422444522477"	"13"	"0.0005564"	"0.00353"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLDPFLLFDEFK"	"[K].mLDPFLLFDEFk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.69855"	"1989.08109"	"1989.08074"	"0.17"	"0.00011"	"9/102"	"9"	"102"	"188202.309143066"	"HCD"	"MS2"	"27.05217"	"4.0"	"100.000"	"99.4920"	"34032"	"34032"	"34027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.0"	""	"6.0"	""	"4.6"	""	"10.2"	""	"7.1"	"7.7"	""	"1228"	"27"	"37.000"	"30.000"	"0.133711380022484"	"14"	"0.0002277"	"0.001161"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLDPFLLFDEFK"	"[K].mLDPFLLFDEFk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"663.69897"	"1989.08237"	"1989.08074"	"0.82"	"0.00054"	"8/102"	"8"	"102"	"154499.736206055"	"HCD"	"MS2"	"8.358615"	"5.9"	"100.000"	"99.2645"	"33961"	"33961"	"33955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.0"	""	"3.7"	""	"10.1"	""	"14.5"	""	"12.5"	"9.8"	""	"1237"	"17"	"37.000"	"30.000"	"1.13851748290855"	"14"	"0.0008731"	"0.008843"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEGWVPLETMIK"	"[K].lDEGWVPLETMIk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"995.05963"	"1989.11199"	"1989.11311"	"-0.56"	"-0.00056"	"12/112"	"12"	"112"	"174254.517272949"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"82.0076"	"27915"	"27915"	"27886"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.3"	""	"14.8"	""	"12.3"	""	"25.0"	""	"25.6"	"28.3"	""	"1099"	"40"	"37.000"	"30.000"	"0.0060390370876817"	"22"	"0"	"0.0001478"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEGWVPLETMIK"	"[K].lDEGWVPLETMIk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"995.05969"	"1989.11211"	"1989.11311"	"-0.50"	"-0.00050"	"11/112"	"11"	"112"	"216220.505249023"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"82.0171"	"27868"	"27868"	"27840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.9"	""	"17.8"	""	"17.2"	""	"30.9"	""	"31.1"	"34.7"	""	"1106"	"40"	"37.000"	"30.000"	"0.0061762537602265"	"20"	"0"	"0.0001187"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLEEVNITDLNK"	"[K].lQLEEVnITDLnk.[N]"	"N-Term(TMT6plex); N7(Deamidated); N12(Deamidated); K13(TMT6plex)"	"1"	"1"	"P25086"	"Interleukin-1 receptor antagonist protein OS=Rattus norvegicus OX=10116 GN=Il1rn PE=2 SV=1"	"P25086"	"Interleukin-1 receptor antagonist protein OS=Rattus norvegicus OX=10116 GN=Il1rn PE=2 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"663.71027"	"1989.11625"	"1989.11561"	"0.32"	"0.00021"	"6/130"	"6"	"130"	"1029901.55291748"	"HCD"	"MS2"	"41.6482"	"39.3"	"100.000"	"71.8094"	"23766"	"23766"	"23738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.6"	""	"39.1"	""	"39.3"	""	"67.5"	"0.1"	"88.2"	"87.6"	""	"1060"	"8"	"37.000"	"30.000"	"7.94832962816258"	"16"	"0.003818"	"0.09662"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEGWVPLETMIK"	"[K].lDEGWVPLETMIk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"663.71027"	"1989.11625"	"1989.11311"	"1.58"	"0.00105"	"13/112"	"13"	"112"	"1403264.86376953"	"HCD"	"MS2"	"14.43892"	"39.4"	"100.000"	"82.0034"	"27862"	"27862"	"27840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.3"	""	"42.9"	""	"41.2"	""	"76.1"	""	"85.3"	"92.9"	""	"1060"	"31"	"37.000"	"30.000"	"0.0381307958341961"	"16"	"0.0001889"	"0.0004364"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEGWVPLETMIK"	"[K].lDEGWVPLETMIk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"663.71069"	"1989.11753"	"1989.11311"	"2.22"	"0.00147"	"13/112"	"13"	"112"	"1578925.93060303"	"HCD"	"MS2"	"4.01582"	"46.2"	"100.000"	"82.0265"	"27922"	"27922"	"27902"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.0"	""	"52.3"	""	"45.6"	""	"83.7"	"1.3"	"90.7"	"94.7"	""	"1054"	"36"	"37.000"	"30.000"	"0.0136085112046443"	"22"	"0.0001308"	"0.0002373"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSVQLLTPANLLAK"	"[R].ySVQLLTPANLLAk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"663.74475"	"1989.21970"	"1989.21487"	"2.43"	"0.00161"	"14/134"	"14"	"134"	"3416373.90057373"	"HCD"	"MS2"	"37.15837"	"86.2"	"100.000"	"75.8569"	"25365"	"25365"	"25345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.7"	""	"125.5"	""	"121.8"	""	"124.7"	""	"144.9"	"147.8"	""	"415"	"29"	"33.000"	"26.000"	"0.0242671123636623"	"15"	"0.0001859"	"0.0003713"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSVQLLTPANLLAK"	"[R].ySVQLLTPANLLAk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"663.74475"	"1989.21970"	"1989.21487"	"2.43"	"0.00161"	"10/134"	"10"	"134"	"3656459.97113037"	"HCD"	"MS2"	"26.01695"	"90.1"	"100.000"	"75.8373"	"25409"	"25409"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.2"	""	"128.1"	""	"138.4"	""	"137.1"	""	"131.8"	"178.1"	""	"415"	"28"	"33.000"	"26.000"	"0.0337301366818225"	"15"	"0"	"0.0001124"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQLKPGLQYK"	"[R].lNQLkPGLQYk.[L]"	"N-Term(TMT6plex); K5(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.75330"	"1989.24533"	"1989.24639"	"-0.53"	"-0.00035"	"11/100"	"11"	"100"	"4611157.27020264"	"HCD"	"MS2"	"15.28196"	"321.6"	"100.000"	"42.3893"	"11750"	"11750"	"11724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"418.0"	""	"368.3"	""	"349.9"	""	"585.8"	"3.5"	"682.5"	"646.2"	""	"262"	"14"	"31.000"	"24.000"	"0.519124224874626"	"13"	"7.476E-05"	"0.0001975"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTVPGLEDLPQHGLPR"	"[K].mTVPGLEDLPqHGLPR.[L]"	"N-Term(TMT6plex); Q11(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"664.03101"	"1990.07846"	"1990.06291"	"7.81"	"0.00518"	"13/142"	"13"	"142"	"1594727.01049805"	"HCD"	"MS2"	"53.91344"	"94.7"	"100.000"	"53.2003"	"16141"	"16141"	"16130"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.9"	""	"113.0"	""	"125.3"	""	"133.2"	""	"159.6"	"242.1"	""	"1239"	"30"	"37.000"	"30.000"	"0.063685609668935"	"22"	"0.0001308"	"0.0002969"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQDDAPAGGIWGFIK"	"[R].gQDDAPAGGIWGFIk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3T1I4"	"Protein PRRC1 OS=Rattus norvegicus OX=10116 GN=Prrc1 PE=2 SV=1"	"Q3T1I4"	"Protein PRRC1 OS=Rattus norvegicus OX=10116 GN=Prrc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"995.54376"	"1990.08025"	"1990.07983"	"0.21"	"0.00021"	"8/140"	"8"	"140"	"135653.627319336"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"70.2809"	"23090"	"23090"	"23059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.1"	""	"12.3"	""	"14.2"	""	"19.3"	""	"22.2"	"29.0"	""	"1229"	"22"	"37.000"	"30.000"	"0.404130741054906"	"17"	"0.0006037"	"0.004893"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQDDAPAGGIWGFIK"	"[R].gQDDAPAGGIWGFIk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3T1I4"	"Protein PRRC1 OS=Rattus norvegicus OX=10116 GN=Prrc1 PE=2 SV=1"	"Q3T1I4"	"Protein PRRC1 OS=Rattus norvegicus OX=10116 GN=Prrc1 PE=2 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"664.03241"	"1990.08268"	"1990.07983"	"1.43"	"0.00095"	"8/140"	"8"	"140"	"2152908.98443604"	"HCD"	"MS2"	"38.29771"	"87.1"	"100.000"	"70.1504"	"23088"	"23088"	"23066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.5"	""	"114.4"	""	"125.1"	""	"119.1"	"1.3"	"153.5"	"175.0"	""	"1265"	"22"	"38.000"	"31.000"	"0.35979947875873"	"15"	"0"	"2.237E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQDDAPAGGIWGFIK"	"[R].gQDDAPAGGIWGFIk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3T1I4"	"Protein PRRC1 OS=Rattus norvegicus OX=10116 GN=Prrc1 PE=2 SV=1"	"Q3T1I4"	"Protein PRRC1 OS=Rattus norvegicus OX=10116 GN=Prrc1 PE=2 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"664.03308"	"1990.08469"	"1990.07983"	"2.44"	"0.00162"	"8/140"	"8"	"140"	"2484289.4107666"	"HCD"	"MS2"	"54.96849"	"107.9"	"100.000"	"70.2211"	"23065"	"23065"	"23043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.1"	""	"141.6"	""	"161.1"	""	"145.1"	"1.8"	"194.6"	"204.2"	""	"1256"	"23"	"37.000"	"30.000"	"0.281163955022756"	"18"	"0"	"4.733E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQNPMVTGTSVLGVK"	"[R].tQNPMVTGTSVLGVk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"664.05042"	"1990.13669"	"1990.14072"	"-2.02"	"-0.00134"	"18/156"	"18"	"156"	"9386671.21020508"	"HCD"	"MS2"	"4.578052"	"270.1"	"100.000"	"49.8087"	"14812"	"14812"	"14782"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"420.2"	""	"426.1"	""	"438.4"	""	"326.1"	""	"474.2"	"472.8"	""	"973"	"53"	"36.000"	"29.000"	"0.000268585674210088"	"23"	"0"	"7.551E-06"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFAQAQSYIYIEK"	"[K].aFAQAQSYIYIEk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"664.05103"	"1990.13852"	"1990.10498"	"16.85"	"0.01118"	"6/124"	"6"	"124"	"2547598.80682373"	"HCD"	"MS2"	"0"	"93.0"	"100.000"	"58.9174"	"18512"	"18512"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.1"	""	"123.3"	""	"123.9"	""	"164.7"	"1.6"	"185.0"	"170.6"	""	"979"	"8"	"36.000"	"29.000"	"8.27470836039377"	"15"	"0.0009727"	"0.01058"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQNPMVTGTSVLGVK"	"[R].tQNPMVTGTSVLGVk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"2"	"2"	"0.8169"	"0.0000"	"1"	"1"	"1"	"995.57361"	"1990.13994"	"1990.14072"	"-0.39"	"-0.00039"	"18/156"	"18"	"156"	"393251.133972168"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"49.7308"	"14734"	"14734"	"14703"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.2"	""	"48.9"	""	"59.1"	""	"32.4"	"1.2"	"55.3"	"54.0"	""	"991"	"71"	"36.000"	"29.000"	"4.24662252311647E-06"	"29"	"0"	"1.294E-05"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQNPMVTGTSVLGVK"	"[R].tQNPMVTGTSVLGVk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"3"	"3"	"0.8939"	"0.0000"	"1"	"1"	"1"	"664.05219"	"1990.14200"	"1990.14072"	"0.65"	"0.00043"	"19/156"	"19"	"156"	"9468591.02154541"	"HCD"	"MS2"	"2.189717"	"279.5"	"100.000"	"49.5721"	"14669"	"14669"	"14639"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"423.5"	""	"447.2"	""	"430.0"	""	"334.5"	"1.0"	"504.3"	"505.1"	""	"984"	"66"	"36.000"	"29.000"	"1.17210117892447E-05"	"24"	"0"	"1.662E-06"	"1.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFAQAQSYIYIEK"	"[K].aFAQAQSYIYIEk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"664.05243"	"1990.14273"	"1990.10498"	"18.97"	"0.01258"	"12/124"	"12"	"124"	"2653779.42114258"	"HCD"	"MS2"	"8.290691"	"89.9"	"100.000"	"58.8060"	"18417"	"18417"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.5"	""	"131.8"	""	"120.7"	""	"159.7"	"0.2"	"173.5"	"171.9"	""	"978"	"24"	"36.000"	"29.000"	"0.182940077665034"	"15"	"0.0003839"	"0.001815"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPEYLEGLPEK"	"[K].kPEYLEGLPEk.[M]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"664.06433"	"1990.17844"	"1990.18279"	"-2.19"	"-0.00145"	"11/114"	"11"	"114"	"3753896.8192749"	"HCD"	"MS2"	"29.8606"	"186.3"	"100.000"	"42.1110"	"11636"	"11636"	"11615"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.1"	""	"232.6"	""	"251.9"	""	"286.0"	"6.9"	"349.9"	"368.9"	""	"773"	"10"	"35.000"	"28.000"	"3.79445579977224"	"17"	"0"	"0.0001153"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPEYLEGLPEK"	"[K].kPEYLEGLPEk.[M]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"664.06464"	"1990.17936"	"1990.18279"	"-1.73"	"-0.00114"	"13/114"	"13"	"114"	"5532903.12945557"	"HCD"	"MS2"	"26.0319"	"256.6"	"100.000"	"42.3152"	"11764"	"11764"	"11742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"361.6"	""	"325.8"	""	"351.7"	""	"379.7"	"11.7"	"515.5"	"487.7"	""	"766"	"22"	"35.000"	"28.000"	"0.217870672513191"	"20"	"0"	"7.666E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPIPDEHLILK"	"[K].kPIPDEHLILk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.32184"	"1990.26552"	"1990.26679"	"-0.64"	"-0.00032"	"6/102"	"6"	"102"	"20062120.7956543"	"HCD"	"MS2"	"31.19843"	"411.5"	"73.584"	"40.4023"	"10983"	"10983"	"10957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"524.0"	""	"475.9"	""	"555.0"	""	"734.2"	""	"831.8"	"787.0"	""	"154"	"19"	"28.000"	"21.000"	"0.0947306953525534"	"14"	"0.0009404"	"0.01025"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPIPDEHLILK"	"[K].kPIPDEHLILk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.32187"	"1990.26565"	"1990.26679"	"-0.58"	"-0.00029"	"6/102"	"6"	"102"	"12501615.9788818"	"HCD"	"MS2"	"23.80455"	"207.6"	"49.137"	"40.3210"	"10905"	"10905"	"10885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.7"	""	"236.7"	""	"284.2"	""	"368.0"	"0.4"	"416.3"	"383.2"	""	"154"	"14"	"28.000"	"21.000"	"0.285424155772583"	"13"	"0.00348"	"0.07758"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TMLELINQLDGFDPR"	"[R].tMLELINQLDGFDPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"3"	"3"	"3"	"664.35260"	"1991.04325"	"1991.04693"	"-1.85"	"-0.00123"	"4/152"	"4"	"152"	"174634.513916016"	"HCD"	"MS2"	"13.13743"	"3.6"	"100.000"	"91.8976"	"31730"	"31730"	"31723"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.8"	""	"2.2"	""	"7.6"	""	"5.7"	""	"5.7"	"8.8"	""	"1268"	"2"	"38.000"	"31.000"	"41.4084770378497"	"14"	"0.0009404"	"0.009729"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMLELINQLDGFDPR"	"[R].tMLELINQLDGFDPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"664.35394"	"1991.04728"	"1991.04693"	"0.17"	"0.00012"	"8/152"	"8"	"152"	"168702.059997559"	"HCD"	"MS2"	"4.838592"	"3.5"	"100.000"	"91.9847"	"31735"	"31735"	"31728"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.6"	""	"5.3"	""	"4.0"	""	"6.5"	""	"7.6"	"7.2"	""	"1274"	"20"	"38.000"	"31.000"	"0.713081931768575"	"25"	"0.0001889"	"0.0008761"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLDASEEAIKK"	"[K].sLLDASEEAIkk.[D]"	"N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.40448"	"1991.19889"	"1991.19917"	"-0.14"	"-0.00009"	"9/104"	"9"	"104"	"22277934.9160156"	"HCD"	"MS2"	"32.11818"	"612.7"	"50.764"	"47.5199"	"13833"	"13833"	"13816"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"722.7"	""	"573.0"	""	"593.4"	""	"1185.1"	""	"1373.0"	"1394.4"	""	"530"	"17"	"34.000"	"27.000"	"0.582432866287979"	"14"	"0"	"1.434E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLDASEEAIKK"	"[K].sLLDASEEAIkk.[D]"	"N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"1"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"664.40497"	"1991.20035"	"1991.19917"	"0.59"	"0.00039"	"16/104"	"16"	"104"	"26183099.5585938"	"HCD"	"MS2"	"24.06074"	"654.2"	"49.130"	"47.8641"	"14021"	"14021"	"14002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"825.8"	""	"560.1"	""	"630.6"	""	"1308.8"	"1.8"	"1399.9"	"1493.9"	""	"497"	"37"	"33.000"	"26.000"	"0.00456379778322064"	"18"	"0"	"6.378E-06"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGNIYKPNNK"	"[R].eQGNIYkPNNk.[A]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"664.72058"	"1992.14719"	"1992.14814"	"-0.47"	"-0.00032"	"11/98"	"11"	"98"	"626611.109680176"	"HCD"	"MS2"	"53.92421"	"42.4"	"100.000"	"29.8121"	"6614"	"6614"	"6586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.2"	""	"38.8"	""	"35.6"	""	"80.9"	"1.0"	"103.7"	"99.6"	""	"932"	"12"	"36.000"	"29.000"	"3.29902735523008"	"14"	"0.0001859"	"0.0003346"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGNIYKPNNK"	"[R].eQGNIYkPNNk.[A]"	"N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.72119"	"1992.14902"	"1992.14814"	"0.44"	"0.00030"	"13/98"	"13"	"98"	"1006496.08129883"	"HCD"	"MS2"	"29.09529"	"69.8"	"100.000"	"29.8218"	"6659"	"6659"	"6636"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.5"	""	"54.7"	""	"47.5"	""	"139.4"	"1.1"	"179.7"	"180.0"	""	"902"	"21"	"36.000"	"29.000"	"0.342118486338162"	"14"	"0"	"0.0001138"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KRPETVATQFK"	"[K].kRPETVATQFk.[M]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.74518"	"1992.22098"	"1992.22091"	"0.04"	"0.00002"	"5/108"	"5"	"108"	"755147.170776367"	"HCD"	"MS2"	"42.62712"	"49.4"	"100.000"	"30.7042"	"7021"	"7021"	"6992"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.8"	""	"64.3"	""	"59.4"	""	"71.6"	""	"98.1"	"118.9"	""	"313"	"1"	"31.000"	"24.000"	"11.2853320492124"	"13"	"0.00252"	"0.0384"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYELAAGGTAVGTGLNTR"	"[R].iYELAAGGTAVGTGLNTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.03528"	"1993.09128"	"1993.09157"	"-0.14"	"-0.00010"	"17/168"	"17"	"168"	"1797081.17449951"	"HCD"	"MS2"	"48.00287"	"71.7"	"100.000"	"54.3389"	"16644"	"16644"	"16621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.5"	""	"62.2"	""	"82.9"	""	"142.4"	"1.9"	"164.7"	"152.1"	""	"1154"	"28"	"37.000"	"30.000"	"0.0948802484295016"	"14"	"0"	"6.568E-06"	"1.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYELAAGGTAVGTGLNTR"	"[R].iYELAAGGTAVGTGLNTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.03595"	"1993.09330"	"1993.09157"	"0.87"	"0.00058"	"23/168"	"23"	"168"	"2603280.80877686"	"HCD"	"MS2"	"0"	"81.9"	"100.000"	"54.1602"	"16518"	"16518"	"16493"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.5"	""	"107.5"	""	"106.2"	""	"140.9"	"4.7"	"169.5"	"166.2"	""	"1146"	"68"	"37.000"	"30.000"	"9.03971257537727E-06"	"17"	"0"	"2.919E-07"	"1.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIIDSPEISSWK"	"[K].fLIIDSPEISSWk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q4KLG2"	"GTPase IMAP family member 8 OS=Rattus norvegicus OX=10116 GN=Gimap8 PE=2 SV=1"	"Q4KLG2"	"GTPase IMAP family member 8 OS=Rattus norvegicus OX=10116 GN=Gimap8 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"997.07343"	"1993.13957"	"1993.14104"	"-0.73"	"-0.00073"	"4/108"	"4"	"108"	"81295.7002563477"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"81.3796"	"27659"	"27659"	"27630"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"7.1"	""	"6.4"	""	"5.1"	""	"6.8"	"9.2"	""	"962"	"9"	"36.000"	"29.000"	"6.02760905146821"	"15"	"0.0008125"	"0.007674"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPGMPSFAPDKPGR"	"[K].yPGmPSFAPDkPGR.[I]"	"N-Term(TMT6plex); M4(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.35724"	"1994.05716"	"1994.05699"	"0.09"	"0.00006"	"12/118"	"12"	"118"	"2025523.65063477"	"HCD"	"MS2"	"0"	"104.6"	"100.000"	"36.8748"	"9495"	"9495"	"9466"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.2"	""	"142.4"	""	"134.0"	""	"214.7"	"3.6"	"181.9"	"186.3"	""	"1309"	"42"	"38.000"	"31.000"	"0.00426490783912822"	"15"	"0"	"4.279E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVSMFVQAVEEAK"	"[K].qAVSMFVQAVEEAk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9808"	"0.0000"	"1"	"1"	"1"	"665.70355"	"1995.09610"	"1995.09852"	"-1.21"	"-0.00081"	"15/146"	"15"	"146"	"626038.016357422"	"HCD"	"MS2"	"31.81088"	"23.0"	"100.000"	"78.2854"	"26346"	"26346"	"26321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.6"	""	"23.3"	""	"17.3"	""	"33.2"	""	"69.7"	"49.6"	""	"1204"	"52"	"37.000"	"30.000"	"0.00034962017934783"	"17"	"0"	"2.278E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVSMFVQAVEEAK"	"[K].qAVSMFVQAVEEAk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"665.70386"	"1995.09702"	"1995.09852"	"-0.75"	"-0.00050"	"13/146"	"13"	"146"	"684456.484375"	"HCD"	"MS2"	"36.87907"	"25.0"	"100.000"	"78.2085"	"26366"	"26366"	"26335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.2"	""	"25.4"	""	"26.2"	""	"41.0"	"1.2"	"70.9"	"43.5"	""	"1201"	"38"	"37.000"	"30.000"	"0.00858050822085916"	"16"	"0"	"0.0001514"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"998.05896"	"1995.11064"	"1995.12367"	"-6.53"	"-0.00651"	"7/128"	"7"	"128"	"191872.868652344"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"75.8489"	"25414"	"25414"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.8"	""	"15.4"	""	"16.4"	""	"21.6"	""	"28.6"	"31.8"	""	"1128"	"2"	"37.000"	"30.000"	"35.9980606211469"	"13"	"0.003698"	"0.08552"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"665.70880"	"1995.11185"	"1995.12367"	"-5.92"	"-0.00394"	"13/128"	"13"	"128"	"1936552.47418213"	"HCD"	"MS2"	"5.564921"	"61.1"	"100.000"	"75.8542"	"25364"	"25364"	"25345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.3"	""	"66.8"	""	"79.0"	""	"87.8"	""	"159.6"	"121.8"	""	"1115"	"12"	"37.000"	"30.000"	"3.26020471910548"	"15"	"0.0001889"	"0.0005479"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"665.70905"	"1995.11258"	"1995.12367"	"-5.56"	"-0.00370"	"11/128"	"11"	"128"	"1758188.86193848"	"HCD"	"MS2"	"11.24444"	"55.5"	"100.000"	"75.8395"	"25410"	"25410"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.4"	""	"62.4"	""	"66.3"	""	"80.1"	"2.1"	"131.1"	"110.4"	""	"1103"	"27"	"37.000"	"30.000"	"0.107039856149242"	"22"	"0"	"6.979E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WAIAQLNYADMLK"	"[K].wAIAQLNYADMLk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.6207"	"0.0000"	"1"	"1"	"1"	"665.70996"	"1995.11533"	"1995.11378"	"0.78"	"0.00052"	"6/112"	"6"	"112"	"1092700.42175293"	"HCD"	"MS2"	"30.96287"	"40.6"	"100.000"	"79.6053"	"26884"	"26884"	"26865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.3"	""	"53.2"	""	"61.2"	""	"52.2"	"1.3"	"94.3"	"71.7"	""	"1116"	"29"	"37.000"	"30.000"	"0.0678631788360673"	"25"	"0"	"0.0001572"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WAIAQLNYADMLK"	"[K].wAIAQLNYADMLk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"998.06146"	"1995.11565"	"1995.11378"	"0.94"	"0.00094"	"4/112"	"4"	"112"	"144636.945556641"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"79.6207"	"26942"	"26942"	"26911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.5"	""	"12.9"	""	"18.0"	""	"13.3"	""	"18.7"	"24.8"	""	"1112"	"1"	"37.000"	"30.000"	"41.7902329074122"	"13"	"0.002804"	"0.04511"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WAIAQLNYADMLK"	"[K].wAIAQLNYADMLk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"665.71063"	"1995.11734"	"1995.11378"	"1.79"	"0.00119"	"14/112"	"14"	"112"	"1138523.89318848"	"HCD"	"MS2"	"33.86196"	"38.8"	"100.000"	"79.6070"	"26936"	"26936"	"26911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.8"	""	"49.9"	""	"52.3"	""	"49.7"	""	"84.6"	"76.6"	""	"1091"	"26"	"37.000"	"30.000"	"0.133289136649456"	"16"	"0"	"0.000151"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"998.06433"	"1995.12139"	"1995.12367"	"-1.15"	"-0.00114"	"14/128"	"14"	"128"	"1161376.34997559"	"HCD"	"MS2"	"0"	"91.1"	"100.000"	"75.5727"	"25250"	"25250"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.9"	""	"108.4"	""	"114.8"	""	"125.7"	""	"185.5"	"208.7"	""	"1065"	"50"	"37.000"	"30.000"	"0.000476781737655159"	"24"	"0"	"6.182E-06"	"1.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8491"	"0.0000"	"1"	"1"	"1"	"665.71204"	"1995.12156"	"1995.12367"	"-1.06"	"-0.00071"	"10/128"	"10"	"128"	"14432903.960083"	"HCD"	"MS2"	"5.13238"	"146.5"	"47.438"	"75.5189"	"25280"	"25280"	"25263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"220.1"	""	"172.1"	""	"198.6"	""	"174.8"	"0.5"	"294.5"	"330.0"	""	"1061"	"53"	"37.000"	"30.000"	"0.000252746638500273"	"24"	"0"	"4.517E-06"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"998.06464"	"1995.12200"	"1995.12367"	"-0.84"	"-0.00084"	"11/128"	"11"	"128"	"1448828.64801025"	"HCD"	"MS2"	"0"	"103.5"	"100.000"	"75.5233"	"25281"	"25281"	"25263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.5"	""	"134.6"	""	"136.8"	""	"132.9"	""	"193.8"	"233.0"	""	"1045"	"66"	"37.000"	"30.000"	"1.40309247285657E-05"	"20"	"0"	"4.258E-06"	"1.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"665.71246"	"1995.12284"	"1995.12367"	"-0.42"	"-0.00028"	"10/128"	"10"	"128"	"12941364.0585938"	"HCD"	"MS2"	"4.204772"	"192.0"	"68.393"	"75.5377"	"25235"	"25235"	"25217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.0"	""	"234.2"	""	"258.5"	""	"229.6"	"0.6"	"396.9"	"423.5"	""	"1051"	"50"	"37.000"	"30.000"	"0.000557921015307929"	"23"	"0"	"6.054E-06"	"1.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"998.06537"	"1995.12346"	"1995.12367"	"-0.11"	"-0.00011"	"9/128"	"9"	"128"	"904750.015441895"	"HCD"	"MS2"	"0"	"65.2"	"100.000"	"75.2818"	"25131"	"25131"	"25105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.0"	""	"93.2"	""	"82.1"	""	"76.0"	""	"121.3"	"142.9"	""	"1031"	"44"	"37.000"	"30.000"	"0.00189334025906763"	"19"	"0"	"7.863E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"998.06549"	"1995.12370"	"1995.12367"	"0.02"	"0.00002"	"9/128"	"9"	"128"	"551384.345825195"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"75.2236"	"25159"	"25159"	"25135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.3"	""	"56.6"	""	"54.7"	""	"48.5"	"0.9"	"66.1"	"93.8"	""	"1030"	"71"	"37.000"	"30.000"	"4.03466266024599E-06"	"17"	"0"	"8.051E-06"	"1.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"665.71283"	"1995.12394"	"1995.12367"	"0.13"	"0.00009"	"11/128"	"11"	"128"	"5399704.12811279"	"HCD"	"MS2"	"12.43601"	"114.2"	"100.000"	"75.2097"	"25153"	"25153"	"25135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.2"	""	"154.6"	""	"164.6"	""	"126.3"	""	"223.8"	"232.0"	""	"1029"	"38"	"37.000"	"30.000"	"0.00741968348359545"	"26"	"0"	"1.831E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"665.71356"	"1995.12613"	"1995.12367"	"1.23"	"0.00082"	"14/128"	"14"	"128"	"5614521.22271729"	"HCD"	"MS2"	"9.913218"	"121.4"	"100.000"	"75.2291"	"25109"	"25109"	"25089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.1"	""	"145.1"	""	"168.5"	""	"139.4"	"1.3"	"241.1"	"252.3"	""	"1016"	"44"	"37.000"	"30.000"	"0.00224317787255483"	"26"	"0"	"1.158E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMLREDAVLEYLK"	"[R].gMLREDAVLEYLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.71606"	"1995.13364"	"1995.13490"	"-0.63"	"-0.00042"	"7/124"	"7"	"124"	"2303879.7767334"	"HCD"	"MS2"	"6.008566"	"119.1"	"100.000"	"61.6438"	"19624"	"19624"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"258.1"	""	"227.8"	""	"225.1"	""	"115.8"	"0.1"	"132.0"	"161.9"	""	"975"	"7"	"36.000"	"29.000"	"9.24644136590434"	"13"	"0.0001889"	"0.000525"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMLREDAVLEYLK"	"[R].gMLREDAVLEYLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"665.71619"	"1995.13401"	"1995.13490"	"-0.45"	"-0.00030"	"17/124"	"17"	"124"	"6709544.11938477"	"HCD"	"MS2"	"8.813993"	"277.3"	"100.000"	"61.3369"	"19499"	"19499"	"19475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"694.0"	""	"581.2"	""	"553.6"	""	"194.7"	"3.3"	"276.0"	"300.2"	""	"976"	"30"	"36.000"	"29.000"	"0.0455428098788931"	"18"	"0"	"2.209E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMLREDAVLEYLK"	"[R].gMLREDAVLEYLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.71637"	"1995.13456"	"1995.13490"	"-0.17"	"-0.00012"	"13/124"	"13"	"124"	"2718408.74981689"	"HCD"	"MS2"	"1.529003"	"139.8"	"100.000"	"61.4709"	"19500"	"19500"	"19481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"293.6"	""	"288.5"	""	"268.1"	""	"123.5"	""	"161.9"	"181.8"	""	"962"	"10"	"36.000"	"29.000"	"4.99051168008464"	"13"	"0.0001889"	"0.0007947"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMLREDAVLEYLK"	"[R].gMLREDAVLEYLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.71722"	"1995.13712"	"1995.13490"	"1.11"	"0.00074"	"15/124"	"15"	"124"	"4904663.10217285"	"HCD"	"MS2"	"2.382212"	"226.1"	"100.000"	"61.1687"	"19377"	"19377"	"19353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"535.2"	""	"473.4"	""	"452.9"	""	"171.3"	""	"235.8"	"256.1"	""	"952"	"13"	"36.000"	"29.000"	"2.22641927252706"	"13"	"0"	"0.0001579"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ACIDTALENLSTLK"	"[K].acIDTALENLSTLk.[M]"	"N-Term(TMT6plex); C2(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"666.03271"	"1996.08359"	"1996.08591"	"-1.16"	"-0.00077"	"11/130"	"11"	"130"	"469439.356933594"	"HCD"	"MS2"	"18.82602"	"19.1"	"100.000"	"84.2020"	"28810"	"28810"	"28785"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.3"	""	"22.0"	""	"33.3"	""	"25.0"	""	"45.5"	"31.1"	""	"1179"	"23"	"37.000"	"30.000"	"0.268215461458453"	"22"	"0.0001859"	"0.0003304"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ACIDTALENLSTLK"	"[K].acIDTALENLSTLk.[M]"	"N-Term(TMT6plex); C2(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"666.03326"	"1996.08524"	"1996.08591"	"-0.33"	"-0.00022"	"11/130"	"11"	"130"	"588174.72644043"	"HCD"	"MS2"	"19.5219"	"23.6"	"100.000"	"84.0574"	"28700"	"28700"	"28676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.9"	""	"27.0"	""	"42.9"	""	"38.0"	""	"49.1"	"41.4"	""	"1179"	"29"	"37.000"	"30.000"	"0.0745562076834243"	"21"	"0"	"5.551E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGWMALDEFLVK"	"[R].vGGGWmALDEFLVk.[N]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.2667"	"0.0000"	"1"	"1"	"1"	"666.03711"	"1996.09677"	"1996.09779"	"-0.51"	"-0.00034"	"8/106"	"8"	"106"	"846948.005737305"	"HCD"	"MS2"	"83.13827"	"28.7"	"100.000"	"83.3044"	"28393"	"28393"	"28366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.0"	""	"28.9"	""	"43.2"	""	"56.7"	""	"60.8"	"53.0"	""	"1178"	"15"	"37.000"	"30.000"	"1.90158303768874"	"24"	"0.0001889"	"0.0007651"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPVASVLSPYFGTK"	"[R].gDPVASVLSPYFGTk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"666.04083"	"1996.10794"	"1996.11555"	"-3.81"	"-0.00253"	"12/136"	"12"	"136"	"2253138.13397217"	"HCD"	"MS2"	"30.01371"	"122.1"	"100.000"	"70.9798"	"23375"	"23375"	"23347"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.1"	""	"180.1"	""	"179.0"	""	"190.9"	""	"211.2"	"219.8"	""	"1136"	"24"	"37.000"	"30.000"	"0.253716280341747"	"14"	"0"	"2.11E-05"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINTWVAENTNHK"	"[K].lINTWVAENTNHk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"666.71680"	"1998.13584"	"1998.11728"	"9.29"	"0.00619"	"15/128"	"15"	"128"	"5598433.93902588"	"HCD"	"MS2"	"19.34079"	"332.6"	"100.000"	"44.7862"	"12719"	"12719"	"12688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"568.3"	""	"432.1"	""	"452.1"	""	"418.9"	""	"655.2"	"630.5"	""	"920"	"7"	"36.000"	"29.000"	"9.15709735934105"	"13"	"0.0001889"	"0.000766"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LINTWVAENTNHK"	"[K].lINTWVAENTNHk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"666.71863"	"1998.14133"	"1998.11728"	"12.04"	"0.00802"	"14/128"	"14"	"128"	"4661036.06640625"	"HCD"	"MS2"	"13.21914"	"282.2"	"100.000"	"45.0020"	"12856"	"12856"	"12827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"489.8"	""	"391.9"	""	"414.6"	""	"359.6"	""	"512.0"	"503.5"	""	"875"	"5"	"36.000"	"29.000"	"13.0610489577661"	"13"	"0.0003839"	"0.001949"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGGPQMIQLSLDGK"	"[R].vPGGPQMIQLSLDGk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"999.57568"	"1998.14409"	"1998.14580"	"-0.86"	"-0.00086"	"9/134"	"9"	"134"	"131971.582641602"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"64.5077"	"20741"	"20741"	"20713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.6"	""	"10.0"	""	"14.2"	""	"12.4"	""	"14.9"	"14.2"	""	"839"	"29"	"36.000"	"29.000"	"0.0489476634357074"	"17"	"0.0005564"	"0.003294"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGGPQMIQLSLDGK"	"[R].vPGGPQMIQLSLDGk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"666.72015"	"1998.14591"	"1998.14580"	"0.05"	"0.00003"	"14/134"	"14"	"134"	"30970136.0214844"	"HCD"	"MS2"	"23.67358"	"223.5"	"30.648"	"64.2227"	"20677"	"20677"	"20659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"303.4"	""	"311.6"	""	"335.9"	""	"342.1"	""	"399.2"	"429.6"	""	"839"	"27"	"36.000"	"29.000"	"0.0886608652211474"	"14"	"0"	"0.0001776"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGGPQMIQLSLDGK"	"[R].vPGGPQMIQLSLDGk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"999.57660"	"1998.14592"	"1998.14580"	"0.06"	"0.00006"	"10/134"	"10"	"134"	"865688.531005859"	"HCD"	"MS2"	"0"	"48.1"	"100.000"	"64.1899"	"20611"	"20611"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.3"	""	"71.0"	""	"72.8"	""	"70.1"	"0.5"	"86.8"	"88.3"	""	"841"	"70"	"36.000"	"29.000"	"4.52653622331345E-06"	"21"	"0"	"0.0001026"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGGPQMIQLSLDGK"	"[R].vPGGPQMIQLSLDGk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"666.72070"	"1998.14756"	"1998.14580"	"0.88"	"0.00058"	"14/134"	"14"	"134"	"25153507.4750977"	"HCD"	"MS2"	"24.70313"	"265.1"	"39.165"	"64.2061"	"20618"	"20618"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"355.3"	""	"367.4"	""	"410.5"	""	"408.4"	""	"486.1"	"488.2"	""	"821"	"25"	"36.000"	"29.000"	"0.124254796223558"	"14"	"0.0001859"	"0.000343"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGGPQMIQLSLDGK"	"[R].vPGGPQMIQLSLDGk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"999.57758"	"1998.14787"	"1998.14580"	"1.04"	"0.00104"	"12/134"	"12"	"134"	"1116128.60491943"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"64.1997"	"20668"	"20668"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.2"	""	"82.4"	""	"90.8"	""	"86.3"	""	"98.5"	"113.2"	""	"812"	"78"	"36.000"	"29.000"	"6.21621509442903E-07"	"17"	"0"	"8.343E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLIGSIPGPFGEEMR"	"[K].lPGLIGSIPGPFGEEMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"1000.04565"	"1999.08403"	"1999.08840"	"-2.18"	"-0.00218"	"8/144"	"8"	"144"	"205579.112182617"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"82.7392"	"28213"	"28213"	"28189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.4"	""	"8.6"	""	"7.5"	""	"9.3"	""	"12.4"	"13.2"	""	"1164"	"27"	"37.000"	"30.000"	"0.111923938622571"	"15"	"0.0001889"	"0.0004513"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLIGSIPGPFGEEMR"	"[K].lPGLIGSIPGPFGEEMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.03400"	"1999.08744"	"1999.08840"	"-0.48"	"-0.00032"	"12/144"	"12"	"144"	"1682013.08416748"	"HCD"	"MS2"	"5.247613"	"18.0"	"100.000"	"82.6961"	"28145"	"28145"	"28128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.9"	""	"23.0"	""	"35.1"	"1.7"	"25.1"	"1.1"	"37.4"	"33.2"	""	"1162"	"34"	"37.000"	"30.000"	"0.0245570464888315"	"15"	"0"	"1.281E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLIGSIPGPFGEEMR"	"[K].lPGLIGSIPGPFGEEMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.03412"	"1999.08780"	"1999.08840"	"-0.30"	"-0.00020"	"15/144"	"15"	"144"	"1956281.68200684"	"HCD"	"MS2"	"3.072228"	"16.3"	"100.000"	"82.7645"	"28223"	"28223"	"28205"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.3"	""	"23.5"	""	"25.9"	""	"26.9"	""	"29.0"	"30.5"	""	"1163"	"42"	"37.000"	"30.000"	"0.00342412585589276"	"15"	"0"	"5.208E-06"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLIGSIPGPFGEEMR"	"[K].lPGLIGSIPGPFGEEMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"1000.04767"	"1999.08806"	"1999.08840"	"-0.17"	"-0.00017"	"11/144"	"11"	"144"	"210136.195251465"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"82.7076"	"28149"	"28149"	"28128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"7.7"	""	"10.0"	""	"8.7"	""	"7.7"	"15.2"	""	"1152"	"26"	"37.000"	"30.000"	"0.14636002783964"	"15"	"0.0003146"	"0.001452"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHQFFNVGLIQPGSVK"	"[K].VHQFFNVGLIQPGSVk.[V]"	"K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8364"	"0.0000"	"1"	"1"	"1"	"667.04889"	"1999.13211"	"1999.13265"	"-0.27"	"-0.00018"	"13/146"	"13"	"146"	"5680169.11572266"	"HCD"	"MS2"	"14.7179"	"188.5"	"100.000"	"51.7895"	"15620"	"15620"	"15590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.3"	""	"288.9"	""	"218.3"	""	"264.3"	"5.5"	"254.5"	"454.4"	""	"892"	"55"	"36.000"	"29.000"	"0.000139744543304475"	"25"	"0"	"2.623E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHQFFNVGLIQPGSVK"	"[K].VHQFFNVGLIQPGSVk.[V]"	"K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"667.04913"	"1999.13285"	"1999.13265"	"0.10"	"0.00007"	"12/146"	"12"	"146"	"6443711.64428711"	"HCD"	"MS2"	"22.2858"	"229.2"	"100.000"	"51.6542"	"15514"	"15514"	"15490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"359.3"	""	"346.2"	""	"285.6"	""	"310.7"	""	"333.1"	"535.0"	""	"898"	"36"	"36.000"	"29.000"	"0.0110470505426228"	"16"	"0"	"7.588E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSIILSAPIPEPKTK"	"[K].lYSIILSAPIPEPKTK.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08849"	"Syntaxin-3 OS=Rattus norvegicus OX=10116 GN=Stx3 PE=1 SV=1"	"Q08849"	"Syntaxin-3 OS=Rattus norvegicus OX=10116 GN=Stx3 PE=1 SV=1"	"1"	"3"	"3"	"0.0833"	"0.0000"	"1"	"1"	"1"	"667.07855"	"1999.22110"	"1999.20408"	"8.51"	"0.00567"	"11/148"	"11"	"148"	"867166.227478027"	"HCD"	"MS2"	"24.71695"	"24.8"	"100.000"	"80.8168"	"27378"	"27378"	"27360"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.4"	""	"32.4"	""	"40.4"	""	"39.7"	"0.7"	"43.5"	"48.7"	""	"351"	"36"	"32.000"	"25.000"	"0.00427835798623716"	""	"0.0003839"	"0.00176"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSIILSAPIPEPKTK"	"[K].lYSIILSAPIPEPKTK.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08849"	"Syntaxin-3 OS=Rattus norvegicus OX=10116 GN=Stx3 PE=1 SV=1"	"Q08849"	"Syntaxin-3 OS=Rattus norvegicus OX=10116 GN=Stx3 PE=1 SV=1"	"1"	"3"	"3"	"0.0811"	"0.0000"	"1"	"1"	"1"	"667.07953"	"1999.22403"	"1999.20408"	"9.98"	"0.00665"	"11/148"	"11"	"148"	"705270.735778809"	"HCD"	"MS2"	"20.71344"	"21.0"	"100.000"	"80.7863"	"27417"	"27417"	"27390"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.3"	""	"23.8"	""	"34.5"	""	"32.6"	""	"48.1"	"39.3"	""	"330"	"37"	"32.000"	"25.000"	"0.0030094279088274"	""	"0.0006037"	"0.004711"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILIPVGIGPHANLK"	"[K].vILIPVGIGPHANLk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q62935"	"von Willebrand factor (Fragment) OS=Rattus norvegicus OX=10116 GN=Vwf PE=2 SV=2"	"Q62935"	"von Willebrand factor (Fragment) OS=Rattus norvegicus OX=10116 GN=Vwf PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.09875"	"1999.28171"	"1999.28322"	"-0.76"	"-0.00050"	"14/118"	"14"	"118"	"2124064.17218018"	"HCD"	"MS2"	"52.6422"	"112.5"	"100.000"	"61.3741"	"19461"	"19461"	"19433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"194.1"	""	"195.9"	""	"187.6"	""	"133.3"	"1.7"	"180.1"	"169.8"	""	"109"	"32"	"27.000"	"20.000"	"0.00358423521358704"	"14"	"0"	"1.711E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMATNDLMTELQK"	"[R].fMATNDLMTELQk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"1000.53180"	"2000.05632"	"2000.05969"	"-1.68"	"-0.00168"	"12/124"	"12"	"124"	"165507.236633301"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"68.6426"	"22473"	"22473"	"22442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.6"	""	"23.2"	""	"20.3"	""	"16.3"	"1.9"	"32.0"	"31.7"	""	"1156"	"48"	"37.000"	"30.000"	"0.00102548151995452"	"18"	"0.0001859"	"0.0003289"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMATNDLMTELQK"	"[R].fMATNDLMTELQk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.8393"	"0.0000"	"1"	"1"	"1"	"667.35742"	"2000.05771"	"2000.05969"	"-0.99"	"-0.00066"	"13/124"	"13"	"124"	"1282060.85498047"	"HCD"	"MS2"	"2.627821"	"49.9"	"100.000"	"68.8220"	"22494"	"22494"	"22474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.7"	""	"69.2"	""	"71.7"	""	"60.5"	"0.9"	"92.7"	"93.8"	""	"1181"	"56"	"37.000"	"30.000"	"0.000134344503287091"	"25"	"0"	"4.877E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMATNDLMTELQK"	"[R].fMATNDLMTELQk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"667.35773"	"2000.05863"	"2000.05969"	"-0.53"	"-0.00035"	"12/124"	"12"	"124"	"820705.12487793"	"HCD"	"MS2"	"8.997507"	"40.3"	"100.000"	"68.7464"	"22515"	"22515"	"22490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.7"	""	"58.3"	""	"58.6"	""	"55.6"	"1.3"	"74.3"	"76.7"	""	"1180"	"46"	"37.000"	"30.000"	"0.0014153114222215"	"24"	"0"	"4.378E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMATNDLMTELQK"	"[R].fMATNDLMTELQk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"1000.53455"	"2000.06182"	"2000.05969"	"1.06"	"0.00106"	"6/124"	"6"	"124"	"173145.92376709"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"68.8077"	"22489"	"22489"	"22458"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.2"	""	"21.5"	""	"22.3"	""	"21.7"	"1.2"	"30.2"	"28.7"	""	"1180"	"29"	"37.000"	"30.000"	"0.0735956273403336"	"17"	"0.000523"	"0.002801"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGVPVVVAMNAFK"	"[R].mFGVPVVVAmNAFk.[T]"	"N-Term(TMT6plex); M1(Oxidation); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.37634"	"2000.11448"	"2000.11133"	"1.57"	"0.00105"	"8/112"	"8"	"112"	"1342227.50146484"	"HCD"	"MS2"	"5.431274"	"58.9"	"100.000"	"65.5413"	"21216"	"21216"	"21187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.5"	""	"73.6"	""	"67.6"	""	"113.7"	"0.8"	"122.9"	"110.9"	""	"1055"	"3"	"37.000"	"30.000"	"24.1669845241916"	"13"	"0.001286"	"0.01893"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGVPVVVAMNAFK"	"[R].mFGVPVVVAmNAFk.[T]"	"N-Term(TMT6plex); M1(Oxidation); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.37659"	"2000.11521"	"2000.11133"	"1.94"	"0.00129"	"8/112"	"8"	"112"	"1122286.98638916"	"HCD"	"MS2"	"18.39395"	"49.6"	"100.000"	"65.6047"	"21189"	"21189"	"21161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.7"	""	"59.3"	""	"70.3"	""	"87.2"	"0.6"	"103.5"	"91.0"	""	"1044"	"3"	"37.000"	"30.000"	"26.3433197328162"	"13"	"0.0006037"	"0.004064"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NSTVWPDPEVFDPLR"	"[R].nSTVWPDPEVFDPLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"1001.01440"	"2001.02153"	"2001.02791"	"-3.19"	"-0.00319"	"6/160"	"6"	"160"	"366504.463989258"	"HCD"	"MS2"	"46.65801"	"27.7"	"100.000"	"74.8774"	"25018"	"25018"	"24991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.5"	""	"35.6"	""	"33.2"	""	"48.3"	"1.1"	"57.5"	"59.8"	""	"1055"	"7"	"37.000"	"30.000"	"9.57684512112828"	"19"	"0.0006037"	"0.004245"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADVVMSMATEDFVK"	"[R].aDVVMSMATEDFVk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"667.68445"	"2001.03879"	"2001.04371"	"-2.46"	"-0.00164"	"14/122"	"14"	"122"	"566061.663330078"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"73.1201"	"24301"	"24301"	"24271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.1"	""	"29.4"	""	"35.8"	""	"39.7"	"1.8"	"57.5"	"59.0"	""	"1135"	"47"	"37.000"	"30.000"	"0.00103268023726117"	"17"	"0"	"2.971E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLETEEWFFK"	"[K].vNTLETEEWFFk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"667.69537"	"2001.07157"	"2001.07335"	"-0.89"	"-0.00059"	"15/118"	"15"	"118"	"4127799.73278809"	"HCD"	"MS2"	"13.13928"	"119.2"	"100.000"	"75.0598"	"25092"	"25092"	"25071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.8"	""	"147.2"	""	"129.2"	""	"200.4"	"3.8"	"261.9"	"264.0"	""	"1181"	"44"	"37.000"	"30.000"	"0.00232391319556637"	"23"	"0"	"5.634E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLETEEWFFK"	"[K].vNTLETEEWFFk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"1001.04028"	"2001.07329"	"2001.07335"	"-0.03"	"-0.00003"	"9/118"	"9"	"118"	"646700.759399414"	"HCD"	"MS2"	"100"	"61.8"	"100.000"	"74.9905"	"25064"	"25064"	"25039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.9"	""	"72.7"	""	"65.5"	""	"124.8"	""	"143.4"	"132.5"	""	"1197"	"48"	"37.000"	"30.000"	"0.000984156476344135"	"20"	"0"	"1.777E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLETEEWFFK"	"[K].vNTLETEEWFFk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"667.69598"	"2001.07340"	"2001.07335"	"0.02"	"0.00002"	"10/118"	"10"	"118"	"3704416.17938232"	"HCD"	"MS2"	"35.67868"	"122.4"	"100.000"	"75.0277"	"25027"	"25027"	"25009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"126.0"	""	"151.9"	""	"148.1"	""	"219.9"	"4.7"	"274.8"	"238.0"	""	"1197"	"30"	"37.000"	"30.000"	"0.0580850215396425"	"19"	"0.0001889"	"0.0004225"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTLETEEWFFK"	"[K].vNTLETEEWFFk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"1001.04266"	"2001.07805"	"2001.07335"	"2.35"	"0.00235"	"12/118"	"12"	"118"	"511726.834838867"	"HCD"	"MS2"	"42.64558"	"47.4"	"100.000"	"74.9701"	"25004"	"25004"	"24977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.2"	""	"56.4"	""	"46.4"	""	"93.5"	"0.3"	"111.3"	"103.0"	""	"1177"	"34"	"37.000"	"30.000"	"0.021564851268025"	"25"	"0.0001308"	"0.0002167"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVPLGTPLCIIVEK"	"[R].dVPLGTPLcIIVEk.[Q]"	"N-Term(TMT6plex); C9(Methylthio); K14(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"667.72345"	"2001.15580"	"2001.15286"	"1.47"	"0.00098"	"8/128"	"8"	"128"	"315737.377197266"	"HCD"	"MS2"	"19.36315"	"12.1"	"100.000"	"86.8298"	"29821"	"29821"	"29793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.5"	""	"15.8"	""	"16.2"	""	"21.1"	""	"24.2"	"22.1"	""	"833"	"21"	"36.000"	"29.000"	"0.327804571408009"	"16"	"0.0001859"	"0.0003569"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPMVETLGTVLQLK"	"[K].nPMVETLGTVLQLk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.73138"	"2001.17960"	"2001.18185"	"-1.13"	"-0.00075"	"11/138"	"11"	"138"	"481600.333557129"	"HCD"	"MS2"	"65.1928"	"13.3"	"100.000"	"83.9025"	"28688"	"28688"	"28663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.7"	""	"16.9"	""	"22.9"	""	"22.2"	""	"21.7"	"23.2"	""	"652"	"9"	"35.000"	"28.000"	"3.80379935161873"	"13"	"0.0005564"	"0.003416"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPMVETLGTVLQLK"	"[K].nPMVETLGTVLQLk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"667.73157"	"2001.18015"	"2001.18185"	"-0.85"	"-0.00057"	"11/138"	"11"	"138"	"538134.895385742"	"HCD"	"MS2"	"59.45346"	"21.0"	"100.000"	"83.4741"	"28513"	"28513"	"28491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.4"	""	"29.0"	""	"30.8"	""	"29.8"	""	"33.5"	"44.8"	""	"655"	"50"	"35.000"	"28.000"	"0.000319309106352445"	"20"	"0"	"1.196E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPMVETLGTVLQLK"	"[K].nPMVETLGTVLQLk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.73218"	"2001.18198"	"2001.18185"	"0.06"	"0.00004"	"10/138"	"10"	"138"	"591479.986206055"	"HCD"	"MS2"	"12.76296"	"20.4"	"100.000"	"83.4539"	"28454"	"28454"	"28430"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.9"	""	"24.3"	""	"32.2"	""	"28.7"	""	"37.8"	"42.6"	""	"650"	"38"	"35.000"	"28.000"	"0.00518660722851938"	"15"	"0"	"4.135E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSEALLVTQQLVK"	"[K].iTSEALLVTQQLVk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"1001.12097"	"2001.23467"	"2001.23600"	"-0.67"	"-0.00067"	"17/126"	"17"	"126"	"433694.499145508"	"HCD"	"MS2"	"0"	"28.5"	"100.000"	"74.6883"	"24941"	"24941"	"24911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.0"	""	"35.5"	""	"40.2"	""	"44.2"	""	"56.3"	"58.0"	""	"258"	"44"	"31.000"	"24.000"	"0.000525520558367305"	"19"	"0"	"7.891E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSEALLVTQQLVK"	"[K].iTSEALLVTQQLVk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"667.74976"	"2001.23471"	"2001.23600"	"-0.64"	"-0.00043"	"17/126"	"17"	"126"	"2642196.57281494"	"HCD"	"MS2"	"28.59318"	"70.7"	"100.000"	"74.5734"	"24842"	"24842"	"24817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.4"	""	"95.9"	""	"107.5"	""	"126.0"	""	"119.9"	"128.7"	""	"253"	"34"	"31.000"	"24.000"	"0.00511788502997265"	"20"	"0"	"1.907E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSEALLVTQQLVK"	"[K].iTSEALLVTQQLVk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"667.74988"	"2001.23508"	"2001.23600"	"-0.46"	"-0.00031"	"15/126"	"15"	"126"	"3400996.37921143"	"HCD"	"MS2"	"27.2795"	"92.6"	"100.000"	"74.5916"	"24901"	"24901"	"24879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.3"	""	"120.4"	""	"126.7"	""	"162.0"	""	"164.6"	"172.4"	""	"248"	"33"	"30.000"	"23.000"	"0.00608725766429228"	"20"	"0"	"1.697E-05"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKVPEWVDTVK"	"[K].lkVPEWVDTVk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.75037"	"2001.23655"	"2001.23516"	"0.69"	"0.00046"	"15/106"	"15"	"106"	"5995211.97821045"	"HCD"	"MS2"	"63.71398"	"281.8"	"100.000"	"56.2398"	"17422"	"17422"	"17397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"572.0"	"3.0"	"483.5"	""	"502.4"	""	"372.2"	""	"387.9"	"334.6"	""	"245"	"27"	"30.000"	"23.000"	"0.0237211690583459"	"14"	"0.0001308"	"0.0002298"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKVPEWVDTVK"	"[K].lkVPEWVDTVk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.75043"	"2001.23673"	"2001.23516"	"0.78"	"0.00052"	"8/106"	"8"	"106"	"6286785.19543457"	"HCD"	"MS2"	"13.36412"	"319.0"	"100.000"	"56.0642"	"17296"	"17296"	"17275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"587.7"	""	"525.7"	""	"553.8"	""	"414.3"	""	"486.6"	"444.7"	""	"245"	"19"	"30.000"	"23.000"	"0.153509793930324"	"14"	"0"	"0.0001366"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSEALLVTQQLVK"	"[K].iTSEALLVTQQLVk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"1001.12238"	"2001.23747"	"2001.23600"	"0.74"	"0.00074"	"16/126"	"16"	"126"	"368411.477172852"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"74.6564"	"24876"	"24876"	"24849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.2"	""	"37.0"	""	"32.6"	""	"43.3"	""	"50.7"	"47.9"	""	"242"	"48"	"30.000"	"23.000"	"0.000182719698653862"	""	"0"	"7.06E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILTQIDHILMDK"	"[R].sILTqIDHILmDk.[E]"	"N-Term(TMT6plex); Q5(Deamidated); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q9QYW0"	"Protein AATF OS=Rattus norvegicus OX=10116 GN=Aatf PE=1 SV=1"	"Q9QYW0"	"Protein AATF OS=Rattus norvegicus OX=10116 GN=Aatf PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"3"	"1001.56891"	"2002.13054"	"2002.12949"	"0.53"	"0.00053"	"2/134"	"2"	"134"	"37028.0333862305"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"84.1820"	"28751"	"28751"	"28724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"2.0"	""	"4.9"	""	"3.0"	""	""	""	""	"1056"	"0"	"37.000"	"30.000"	"48.5997373885675"	"13"	"0.005603"	"0.1781"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPEVLSTMAIIVNK"	"[R].ePEVLSTMAIIVNk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1001.58521"	"2002.16313"	"2002.16587"	"-1.37"	"-0.00137"	"6/118"	"6"	"118"	"113921.760314941"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"76.3866"	"25628"	"25628"	"25599"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"7.3"	""	"11.9"	""	"8.4"	""	"15.3"	"9.6"	""	"828"	"2"	"36.000"	"29.000"	"25.8226221889722"	"13"	"0.00317"	"0.06415"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPEVLSTMAIIVNK"	"[R].ePEVLSTMAIIVNk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.05963"	"2002.16434"	"2002.16587"	"-0.76"	"-0.00051"	"13/118"	"13"	"118"	"2115771.78112793"	"HCD"	"MS2"	"25.08701"	"79.5"	"100.000"	"76.2703"	"25530"	"25530"	"25505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.9"	""	"102.1"	""	"102.3"	""	"119.1"	""	"165.8"	"158.7"	""	"824"	"33"	"36.000"	"29.000"	"0.019493831869213"	"15"	"0.0001859"	"0.000327"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPEVLSTMAIIVNK"	"[R].ePEVLSTMAIIVNk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.06030"	"2002.16635"	"2002.16587"	"0.24"	"0.00016"	"14/118"	"14"	"118"	"2468787.59051514"	"HCD"	"MS2"	"22.56865"	"86.5"	"100.000"	"76.2471"	"25571"	"25571"	"25551"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.5"	""	"108.0"	""	"96.5"	""	"143.4"	"0.0"	"173.1"	"181.1"	""	"833"	"32"	"36.000"	"29.000"	"0.0254457353373171"	"15"	"0"	"4.593E-05"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTKR"	"[K].gVDEATIIDILTkR.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.06836"	"2002.19052"	"2002.19486"	"-2.17"	"-0.00145"	"8/124"	"8"	"124"	"617540.894348145"	"HCD"	"MS2"	"22.14124"	"40.1"	"100.000"	"73.7497"	"24558"	"24558"	"24527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.3"	""	"49.4"	""	"51.3"	""	"61.4"	"1.7"	"85.5"	"83.7"	""	"620"	"9"	"34.000"	"27.000"	"3.95696030731517"	"13"	"0.0006037"	"0.004283"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTKR"	"[K].gVDEATIIDILTkR.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.06952"	"2002.19400"	"2002.19486"	"-0.43"	"-0.00029"	"19/124"	"19"	"124"	"1525530.61108398"	"HCD"	"MS2"	"22.5703"	"79.5"	"100.000"	"73.4293"	"24427"	"24427"	"24399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.8"	""	"98.7"	""	"102.8"	""	"126.3"	"0.9"	"166.0"	"151.7"	""	"598"	"35"	"34.000"	"27.000"	"0.00900888801231649"	"15"	"0"	"3.166E-06"	"1.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDEATIIDILTKR"	"[K].gVDEATIIDILTkR.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.06982"	"2002.19492"	"2002.19486"	"0.03"	"0.00002"	"11/124"	"11"	"124"	"1775199.44262695"	"HCD"	"MS2"	"16.7331"	"92.4"	"100.000"	"73.4729"	"24393"	"24393"	"24369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.6"	""	"101.9"	""	"121.6"	""	"167.4"	"0.4"	"177.6"	"183.8"	""	"591"	"44"	"34.000"	"27.000"	"0.00116026578410582"	"15"	"0"	"7.194E-07"	"1.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGTDDGVVWMNWK"	"[K].hGTDDGVVWMNWk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"668.34528"	"2003.02127"	"2003.02094"	"0.17"	"0.00011"	"14/104"	"14"	"104"	"5283026.2444458"	"HCD"	"MS2"	"14.67793"	"196.9"	"100.000"	"51.2697"	"15357"	"15357"	"15330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.5"	""	"278.8"	""	"228.3"	""	"324.3"	"10.1"	"393.0"	"333.3"	""	"1079"	"45"	"37.000"	"30.000"	"0.00182385979133127"	"20"	"0"	"1.604E-05"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGTDDGVVWMNWK"	"[K].hGTDDGVVWMNWk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.34570"	"2003.02256"	"2003.02094"	"0.81"	"0.00054"	"15/104"	"15"	"104"	"6070040.17828369"	"HCD"	"MS2"	"21.54228"	"219.0"	"100.000"	"51.4741"	"15491"	"15491"	"15462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"318.8"	""	"315.6"	""	"231.4"	""	"364.3"	"2.1"	"454.7"	"390.9"	""	"1075"	"23"	"37.000"	"30.000"	"0.289320008102505"	"14"	"0"	"1.982E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSMFSELPARPPQK"	"[R].gSMFSELPARPPQk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9ET61"	"Complement component C1q receptor OS=Rattus norvegicus OX=10116 GN=Cd93 PE=1 SV=1"	"Q9ET61"	"Complement component C1q receptor OS=Rattus norvegicus OX=10116 GN=Cd93 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"668.37579"	"2003.11283"	"2003.11484"	"-1.00"	"-0.00067"	"16/120"	"16"	"120"	"3009474.78973389"	"HCD"	"MS2"	"56.15722"	"216.2"	"100.000"	"41.7536"	"11537"	"11537"	"11506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"262.2"	""	"283.8"	""	"252.2"	""	"344.8"	"2.2"	"434.4"	"473.2"	""	"1227"	"16"	"37.000"	"30.000"	"1.61738930520387"	"15"	"7.476E-05"	"0.0001998"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSMFSELPARPPQK"	"[R].gSMFSELPARPPQk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9ET61"	"Complement component C1q receptor OS=Rattus norvegicus OX=10116 GN=Cd93 PE=1 SV=1"	"Q9ET61"	"Complement component C1q receptor OS=Rattus norvegicus OX=10116 GN=Cd93 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.37585"	"2003.11301"	"2003.11484"	"-0.91"	"-0.00061"	"17/120"	"17"	"120"	"2568441.26873779"	"HCD"	"MS2"	"35.41385"	"190.9"	"100.000"	"41.5243"	"11399"	"11399"	"11371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"248.1"	""	"228.4"	""	"242.4"	""	"283.8"	"1.5"	"389.9"	"418.9"	""	"1226"	"20"	"37.000"	"30.000"	"0.676800193999971"	"14"	"0"	"7.299E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVMGGEQAATVLATVAR"	"[R].iSVMGGEQAATVLATVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"3"	"3"	"0.9341"	"0.0000"	"1"	"1"	"1"	"668.37616"	"2003.11393"	"2003.11568"	"-0.87"	"-0.00058"	"19/182"	"19"	"182"	"2538913.02398682"	"HCD"	"MS2"	"14.8234"	"30.5"	"100.000"	"70.0349"	"23041"	"23041"	"23018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.9"	""	"43.8"	""	"47.2"	""	"45.4"	"1.7"	"51.3"	"56.7"	""	"1247"	"91"	"37.000"	"30.000"	"4.62206935451122E-08"	"24"	"0"	"1.086E-07"	"1.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVMGGEQAATVLATVAR"	"[R].iSVMGGEQAATVLATVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"1002.06067"	"2003.11406"	"2003.11568"	"-0.81"	"-0.00081"	"16/182"	"16"	"182"	"237486.945495605"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"70.0925"	"23065"	"23065"	"23034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.4"	""	"14.9"	""	"16.1"	""	"13.0"	""	"20.6"	"25.6"	""	"1247"	"40"	"37.000"	"30.000"	"0.00691570497316108"	"20"	"0"	"4.047E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVMGGEQAATVLATVAR"	"[R].iSVMGGEQAATVLATVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"3"	"3"	"0.9452"	"0.0000"	"1"	"1"	"1"	"668.37653"	"2003.11502"	"2003.11568"	"-0.33"	"-0.00022"	"20/182"	"20"	"182"	"2654070.32080078"	"HCD"	"MS2"	"11.42522"	"30.3"	"100.000"	"70.1796"	"23048"	"23048"	"23027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.7"	""	"34.1"	""	"51.7"	""	"43.8"	"0.7"	"55.3"	"56.5"	""	"1232"	"73"	"37.000"	"30.000"	"2.96197038645032E-06"	"21"	"0"	"4.844E-07"	"1.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVMGGEQAATVLATVAR"	"[R].iSVMGGEQAATVLATVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"668.37677"	"2003.11576"	"2003.11568"	"0.04"	"0.00003"	"15/182"	"15"	"182"	"1246889.76098633"	"HCD"	"MS2"	"8.360731"	"36.7"	"100.000"	"70.3558"	"23172"	"23172"	"23146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.0"	""	"46.7"	""	"42.5"	""	"86.1"	"0.3"	"65.8"	"62.4"	""	"1228"	"20"	"37.000"	"30.000"	"0.586365447817161"	"17"	"0"	"5.057E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVMGGEQAATVLATVAR"	"[R].iSVMGGEQAATVLATVAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"1002.06201"	"2003.11675"	"2003.11568"	"0.53"	"0.00054"	"17/182"	"17"	"182"	"211381.864135742"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"70.1934"	"23054"	"23054"	"23027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.2"	""	"16.7"	""	"20.6"	""	"15.9"	""	"26.2"	"30.0"	""	"1210"	"49"	"37.000"	"30.000"	"0.000844802858438843"	"23"	"0"	"3.267E-05"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAAYLYEVSQLK"	"[K].mLAAYLYEVSQLk.[N]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.37903"	"2003.12253"	"2003.12876"	"-3.11"	"-0.00208"	"12/104"	"12"	"104"	"280615.433288574"	"HCD"	"MS2"	"4.54282"	"13.9"	"100.000"	"80.9387"	"27479"	"27479"	"27454"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.6"	""	"14.0"	""	"17.8"	""	"29.2"	""	"28.0"	"28.8"	""	"1186"	"32"	"37.000"	"30.000"	"0.0371582021750695"	"15"	"0.0001889"	"0.00044"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAAYLYEVSQLK"	"[K].mLAAYLYEVSQLk.[N]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.38110"	"2003.12876"	"2003.12876"	"0.00"	"0.00000"	"11/104"	"11"	"104"	"347411.912536621"	"HCD"	"MS2"	"35.42761"	"17.0"	"100.000"	"80.7660"	"27358"	"27358"	"27328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.6"	""	"20.0"	""	"21.6"	""	"41.4"	""	"27.4"	"33.4"	""	"1140"	"24"	"37.000"	"30.000"	"0.245400167980275"	"14"	"0.0001889"	"0.0006112"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTLDTWEPELLK"	"[R].sLTLDTWEPELLk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"668.38660"	"2003.14524"	"2003.14651"	"-0.64"	"-0.00043"	"12/114"	"12"	"114"	"1514649.19519043"	"HCD"	"MS2"	"26.07927"	"52.3"	"100.000"	"75.8982"	"25382"	"25382"	"25361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.9"	""	"73.1"	""	"71.9"	""	"90.3"	""	"89.0"	"108.5"	""	"1018"	"34"	"37.000"	"30.000"	"0.0209275208042202"	"24"	"0"	"6.359E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTLDTWEPELLK"	"[R].sLTLDTWEPELLk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8167"	"0.0000"	"1"	"1"	"1"	"1002.07654"	"2003.14580"	"2003.14651"	"-0.36"	"-0.00036"	"9/114"	"9"	"114"	"186867.881591797"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"75.9559"	"25406"	"25406"	"25377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.1"	""	"18.7"	""	"17.1"	""	"26.4"	""	"30.5"	"25.6"	""	"1018"	"60"	"37.000"	"30.000"	"4.92853428836976E-05"	"28"	"0"	"5.71E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTLDTWEPELLK"	"[R].sLTLDTWEPELLk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"1002.07745"	"2003.14763"	"2003.14651"	"0.56"	"0.00056"	"13/114"	"13"	"114"	"202041.487915039"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"75.8672"	"25422"	"25422"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.6"	""	"19.2"	""	"20.6"	""	"25.3"	""	"26.9"	"26.3"	""	"987"	"50"	"36.000"	"29.000"	"0.00049921446067726"	"20"	"0"	"9.875E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTLDTWEPELLK"	"[R].sLTLDTWEPELLk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"0"	"3"	"3"	"0.5172"	"0.0000"	"1"	"1"	"1"	"668.38745"	"2003.14780"	"2003.14651"	"0.64"	"0.00043"	"13/114"	"13"	"114"	"1680315.9387207"	"HCD"	"MS2"	"39.21663"	"54.5"	"100.000"	"75.8423"	"25411"	"25411"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.7"	""	"68.0"	""	"84.9"	""	"84.9"	""	"106.1"	"101.4"	""	"987"	"29"	"36.000"	"29.000"	"0.0687522882253507"	"28"	"0"	"0.0001301"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDKEWIPVTK"	"[K].aEDkEWIPVTk.[L]"	"N-Term(TMT6plex); K4(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"1"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"668.39581"	"2003.17289"	"2003.17804"	"-2.57"	"-0.00172"	"7/110"	"7"	"110"	"6374958.05883789"	"HCD"	"MS2"	"52.40412"	"410.3"	"100.000"	"43.0219"	"12007"	"12007"	"11996"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"728.4"	""	"610.3"	""	"599.4"	""	"585.3"	"12.3"	"681.2"	"661.2"	""	"761"	"13"	"35.000"	"28.000"	"2.06231338797818"	"15"	"0.0003839"	"0.001923"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPIAGQVVTAMGK"	"[K].kPIAGQVVTAmGk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.41418"	"2003.22800"	"2003.22903"	"-0.51"	"-0.00034"	"10/120"	"10"	"120"	"1581552.64593506"	"HCD"	"MS2"	"0"	"71.2"	"100.000"	"34.1320"	"8370"	"8370"	"8353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.5"	""	"88.4"	""	"88.5"	""	"130.7"	"2.3"	"143.5"	"131.1"	""	"349"	"34"	"32.000"	"25.000"	"0.00652822976534733"	"15"	"0"	"0.0001554"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQFVSILMESIPPR"	"[K].lEQFVSILmESIPPR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.70557"	"2004.10215"	"2004.10372"	"-0.78"	"-0.00052"	"11/154"	"11"	"154"	"149448.280212402"	"HCD"	"MS2"	"48.37974"	"3.9"	"100.000"	"95.4313"	"32855"	"32855"	"32853"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.0"	""	"4.3"	""	"6.3"	""	"7.5"	""	"6.5"	"7.6"	""	"1211"	"16"	"37.000"	"30.000"	"1.4693124125724"	"14"	"0.0001889"	"0.0007057"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQFVSILMESIPPR"	"[K].lEQFVSILmESIPPR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"668.70581"	"2004.10288"	"2004.10372"	"-0.42"	"-0.00028"	"12/154"	"12"	"154"	"145894.869384766"	"HCD"	"MS2"	"36.51468"	"4.8"	"100.000"	"94.7523"	"32667"	"32667"	"32654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.7"	""	"6.3"	""	"5.6"	""	"9.8"	""	"10.2"	"9.5"	""	"1207"	"28"	"37.000"	"30.000"	"0.098554685055423"	"16"	"0"	"0.0001504"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQFVSILMESIPPR"	"[K].lEQFVSILmESIPPR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.70581"	"2004.10288"	"2004.10372"	"-0.42"	"-0.00028"	"5/154"	"5"	"154"	"185593.756286621"	"HCD"	"MS2"	"32.75473"	"4.1"	"100.000"	"93.8063"	"32326"	"32326"	"32320"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"2.3"	""	"7.0"	""	"10.5"	""	"6.1"	"8.6"	""	"1207"	"4"	"37.000"	"30.000"	"22.4738394724632"	"13"	"0.004039"	"0.1044"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQFVSILMESIPPR"	"[K].lEQFVSILmESIPPR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"668.70593"	"2004.10324"	"2004.10372"	"-0.23"	"-0.00016"	"9/154"	"9"	"154"	"192788.884460449"	"HCD"	"MS2"	"25.97961"	"5.3"	"100.000"	"94.6415"	"32617"	"32617"	"32612"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.0"	""	"9.1"	""	"6.8"	""	"6.9"	""	"8.9"	"9.4"	""	"1208"	"20"	"37.000"	"30.000"	"0.552124397848031"	"15"	"0.0001889"	"0.000875"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQFVSILMESIPPR"	"[K].lEQFVSILmESIPPR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"668.70612"	"2004.10379"	"2004.10372"	"0.04"	"0.00003"	"15/154"	"15"	"154"	"156854.785705566"	"HCD"	"MS2"	"14.88206"	"4.1"	"100.000"	"94.9227"	"32712"	"32712"	"32704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	"6.0"	""	"6.9"	""	"9.2"	""	"6.0"	"4.9"	""	"1187"	"45"	"37.000"	"30.000"	"0.00185532810438807"	"16"	"0"	"4.075E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQFVSILMESIPPR"	"[K].lEQFVSILmESIPPR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.70636"	"2004.10453"	"2004.10372"	"0.40"	"0.00027"	"9/154"	"9"	"154"	"175281.3203125"	"HCD"	"MS2"	"21.10052"	"4.2"	"100.000"	"95.0330"	"32762"	"32762"	"32754"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.7"	""	"4.4"	""	"10.2"	""	"5.3"	""	"7.2"	"9.3"	""	"1198"	"19"	"37.000"	"30.000"	"0.733545103359764"	"14"	"0.0001889"	"0.0006318"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQFVSILMESIPPR"	"[K].lEQFVSILmESIPPR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.70654"	"2004.10508"	"2004.10372"	"0.68"	"0.00045"	"5/154"	"5"	"154"	"139245.872009277"	"HCD"	"MS2"	"39.07154"	"4.6"	"100.000"	"94.4167"	"32568"	"32568"	"32559"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.0"	""	"2.4"	""	"5.2"	""	"8.0"	""	"11.0"	"11.9"	""	"1178"	"7"	"37.000"	"30.000"	"11.3531217386946"	"13"	"0.0003839"	"0.001582"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQFVSILMESIPPR"	"[K].lEQFVSILmESIPPR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.70667"	"2004.10544"	"2004.10372"	"0.86"	"0.00058"	"7/154"	"7"	"154"	"100099.283874512"	"HCD"	"MS2"	"57.20433"	"3.0"	"100.000"	"94.1145"	"32458"	"32458"	"32442"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.6"	""	"3.9"	""	"5.1"	""	"5.7"	""	"7.0"	"3.8"	""	"1180"	"17"	"37.000"	"30.000"	"1.1424889587285"	"14"	"0.0008731"	"0.009487"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQFVSILMESIPPR"	"[K].lEQFVSILmESIPPR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.70679"	"2004.10581"	"2004.10372"	"1.04"	"0.00070"	"14/154"	"14"	"154"	"222436.449829102"	"HCD"	"MS2"	"25.96357"	"4.1"	"100.000"	"94.3798"	"32531"	"32531"	"32526"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.9"	""	"3.3"	""	"5.9"	""	"8.4"	""	"10.7"	"8.0"	""	"1180"	"34"	"37.000"	"30.000"	"0.0232729808224414"	"15"	"0"	"7.7E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPDTIEVQQMK"	"[R].kPDTIEVQQMk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.9818"	"0.0000"	"1"	"1"	"1"	"668.72974"	"2004.17466"	"2004.17666"	"-1.00"	"-0.00067"	"9/106"	"9"	"106"	"11451744.5643311"	"HCD"	"MS2"	"18.55719"	"491.0"	"100.000"	"36.7572"	"9490"	"9490"	"9462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"824.0"	""	"608.4"	""	"590.5"	""	"611.7"	"3.9"	"984.4"	"1034.9"	""	"747"	"55"	"35.000"	"28.000"	"0.0001094688627101"	"17"	"0"	"2.401E-05"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPDTIEVQQMK"	"[R].kPDTIEVQQMk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"668.73016"	"2004.17594"	"2004.17666"	"-0.36"	"-0.00024"	"9/106"	"9"	"106"	"12314955.5638428"	"HCD"	"MS2"	"8.029405"	"533.1"	"100.000"	"36.6728"	"9412"	"9412"	"9386"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"892.2"	""	"641.0"	""	"647.3"	""	"655.3"	"2.7"	"1103.4"	"1115.9"	""	"745"	"52"	"35.000"	"28.000"	"0.000233413664590445"	"17"	"0"	"1.646E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIFVPGSIALLTVLER"	"[K].mIFVPGSIALLTVLER.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.73065"	"2004.17740"	"2004.17649"	"0.46"	"0.00031"	"7/136"	"7"	"136"	"177521.249755859"	"HCD"	"MS2"	"25.84352"	"3.7"	"100.000"	"96.0611"	"33045"	"33045"	"33040"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"3.8"	""	"5.5"	""	"6.8"	""	"6.7"	"7.8"	""	"733"	"20"	"35.000"	"28.000"	"0.364816085459335"	"14"	"0.0001308"	"0.0003103"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIFVPGSIALLTVLER"	"[K].mIFVPGSIALLTVLER.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.73077"	"2004.17777"	"2004.17649"	"0.64"	"0.00043"	"9/136"	"9"	"136"	"214938.912780762"	"HCD"	"MS2"	"30.54993"	"2.9"	"100.000"	"95.9368"	"32999"	"32999"	"32995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"3.8"	""	""	""	"8.6"	""	"4.3"	"7.2"	""	"724"	"13"	"35.000"	"28.000"	"1.80596184460525"	"13"	"0.0001889"	"0.001"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMFQTVDLFEGK"	"[K].tDmFQTVDLFEGk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.01605"	"2005.03360"	"2005.03525"	"-0.82"	"-0.00055"	"14/132"	"14"	"132"	"3544103.65979004"	"HCD"	"MS2"	"13.42996"	"145.3"	"100.000"	"63.3466"	"20320"	"20320"	"20291"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.6"	""	"120.0"	""	"146.4"	""	"332.4"	""	"357.0"	"267.5"	""	"1237"	"24"	"37.000"	"30.000"	"0.222504963793826"	"14"	"0"	"3.725E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTQTLSELDLAVPFR"	"[R].wTQTLSELDLAVPFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"669.03632"	"2005.09439"	"2005.09559"	"-0.60"	"-0.00040"	"13/150"	"13"	"150"	"173978.266357422"	"HCD"	"MS2"	"16.01032"	"4.7"	"100.000"	"88.0811"	"30359"	"30359"	"30347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.7"	""	"5.1"	""	"5.3"	""	"7.5"	""	"10.5"	"11.1"	""	"1267"	"42"	"38.000"	"31.000"	"0.0042242208829683"	"29"	"0"	"0.0001611"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTQTLSELDLAVPFR"	"[R].wTQTLSELDLAVPFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"669.03802"	"2005.09952"	"2005.09559"	"1.96"	"0.00131"	"12/150"	"12"	"150"	"183005.421325684"	"HCD"	"MS2"	"8.259056"	"4.9"	"100.000"	"87.9506"	"30262"	"30262"	"30249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"4.9"	""	"10.9"	""	"9.3"	""	"6.9"	"8.9"	""	"1223"	"46"	"37.000"	"30.000"	"0.00148729275154864"	"28"	"0.0001308"	"0.0002121"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSELTTLTSQYIK"	"[R].ySELTTLTSQYIk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1003.06531"	"2005.12334"	"2005.12578"	"-1.22"	"-0.00122"	"8/116"	"8"	"116"	"200464.738891602"	"HCD"	"MS2"	"18.07215"	"17.8"	"100.000"	"65.3844"	"21152"	"21152"	"21123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.2"	""	"23.4"	""	"27.6"	""	"21.5"	""	"29.7"	"42.0"	""	"1090"	"8"	"37.000"	"30.000"	"8.28698403704209"	"13"	"0.0006037"	"0.004247"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSELTTLTSQYIK"	"[R].ySELTTLTSQYIk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"669.04669"	"2005.12552"	"2005.12578"	"-0.13"	"-0.00009"	"9/116"	"9"	"116"	"3094826.98980713"	"HCD"	"MS2"	"26.0656"	"92.6"	"100.000"	"65.3661"	"21144"	"21144"	"21123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.0"	""	"125.2"	""	"140.9"	""	"137.2"	""	"160.9"	"182.0"	""	"1081"	"31"	"37.000"	"30.000"	"0.0386185264243815"	"17"	"0"	"3.666E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSELTTLTSQYIK"	"[R].ySELTTLTSQYIk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"669.04712"	"2005.12680"	"2005.12578"	"0.51"	"0.00034"	"12/116"	"12"	"116"	"3051173.20922852"	"HCD"	"MS2"	"29.81421"	"88.4"	"100.000"	"65.4318"	"21118"	"21118"	"21097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.9"	""	"115.8"	""	"124.9"	""	"123.5"	""	"148.3"	"175.3"	""	"1077"	"32"	"37.000"	"30.000"	"0.0325976061054983"	"25"	"0"	"5.612E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEQLTGQTPVFSK"	"[K].vLEQLTGQTPVFSk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.9672"	"0.0000"	"1"	"1"	"1"	"1003.08960"	"2005.17192"	"2005.17340"	"-0.74"	"-0.00074"	"16/144"	"16"	"144"	"452939.19342041"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"65.1539"	"21058"	"21058"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.8"	""	"48.0"	""	"50.8"	""	"55.7"	"1.5"	"56.9"	"52.7"	""	"809"	"61"	"36.000"	"29.000"	"3.35674635459584E-05"	"18"	"0"	"3.326E-06"	"1.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEQLTGQTPVFSK"	"[K].vLEQLTGQTPVFSk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.06232"	"2005.17240"	"2005.17340"	"-0.50"	"-0.00033"	"14/144"	"14"	"144"	"5749792.25231934"	"HCD"	"MS2"	"0.8094772"	"143.3"	"100.000"	"65.1068"	"20986"	"20986"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.4"	""	"185.8"	""	"206.4"	""	"251.2"	"0.6"	"282.2"	"232.1"	""	"795"	"45"	"35.000"	"29.000"	"0.00114640252249283"	"15"	"0"	"5.789E-06"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEQLTGQTPVFSK"	"[K].vLEQLTGQTPVFSk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.9859"	"0.0000"	"1"	"1"	"1"	"1003.08997"	"2005.17266"	"2005.17340"	"-0.37"	"-0.00037"	"17/144"	"17"	"144"	"500757.942749023"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"65.1690"	"21011"	"21011"	"20985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.9"	""	"54.2"	""	"53.6"	""	"67.7"	"0.9"	"69.9"	"58.6"	""	"795"	"71"	"35.000"	"29.000"	"3.43824747713338E-06"	"18"	"0"	"1.212E-05"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEQLTGQTPVFSK"	"[K].vLEQLTGQTPVFSk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.06262"	"2005.17331"	"2005.17340"	"-0.04"	"-0.00003"	"14/144"	"14"	"144"	"6404633.62683105"	"HCD"	"MS2"	"0"	"149.6"	"100.000"	"65.0504"	"21015"	"21015"	"20995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.0"	""	"195.5"	""	"225.3"	""	"257.2"	""	"291.5"	"240.2"	""	"776"	"47"	"35.000"	"28.000"	"0.000839134787206084"	"15"	"0"	"9.78E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGTPHSHTKPYVR"	"[K].aPGTPHSHTkPYVR.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"502.28845"	"2006.13198"	"2006.13360"	"-0.81"	"-0.00041"	"15/122"	"15"	"122"	"989677.646362305"	"HCD"	"MS2"	"67.28956"	"47.2"	"100.000"	"23.3943"	"4082"	"4082"	"4072"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.2"	""	"70.0"	""	"70.6"	""	"72.3"	""	"85.5"	"79.0"	""	"1075"	"13"	"37.000"	"30.000"	"2.68150412009757"	"13"	"7.476E-05"	"0.0002034"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DKLNNLVLFDK"	"[R].dkLNNLVLFDk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.41272"	"2006.22361"	"2006.22532"	"-0.86"	"-0.00057"	"11/116"	"11"	"116"	"4530737.61401367"	"HCD"	"MS2"	"9.716319"	"219.3"	"100.000"	"57.0995"	"17773"	"17773"	"17749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"412.7"	""	"364.7"	""	"412.9"	""	"335.8"	"0.2"	"303.1"	"235.7"	""	"380"	"22"	"32.000"	"25.000"	"0.12495498909753"	"14"	"0"	"4.92E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DKLNNLVLFDK"	"[R].dkLNNLVLFDk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.41315"	"2006.22489"	"2006.22532"	"-0.22"	"-0.00015"	"8/116"	"8"	"116"	"6169176.72979736"	"HCD"	"MS2"	"8.083855"	"263.6"	"93.750"	"56.8571"	"17620"	"17620"	"17595"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"517.4"	""	"466.2"	""	"483.7"	""	"383.3"	"3.3"	"349.2"	"278.2"	""	"365"	"21"	"32.000"	"25.000"	"0.152146816193083"	"14"	"0"	"1.025E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVEVAQDIFDAVGK"	"[R].sAVEVAQDIFDAVGk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5RJY4"	"Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus OX=10116 GN=Dhrs7b PE=1 SV=1"	"Q5RJY4"	"Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus OX=10116 GN=Dhrs7b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.71027"	"2007.11625"	"2007.11628"	"-0.02"	"-0.00001"	"12/148"	"12"	"148"	"615507.363891602"	"HCD"	"MS2"	"16.61943"	"27.6"	"100.000"	"85.0784"	"29167"	"29167"	"29138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.2"	""	"23.2"	""	"21.0"	""	"16.8"	""	"157.4"	"31.1"	""	"1125"	"14"	"37.000"	"30.000"	"2.13856535430316"	"13"	"0.0001308"	"0.0002593"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVEVAQDIFDAVGK"	"[R].sAVEVAQDIFDAVGk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5RJY4"	"Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus OX=10116 GN=Dhrs7b PE=1 SV=1"	"Q5RJY4"	"Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus OX=10116 GN=Dhrs7b PE=1 SV=1"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"669.71057"	"2007.11716"	"2007.11628"	"0.44"	"0.00029"	"11/148"	"11"	"148"	"407236.120666504"	"HCD"	"MS2"	"15.52002"	"15.4"	"100.000"	"84.8599"	"29027"	"29027"	"29003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.8"	""	"12.9"	""	"15.9"	""	"27.0"	""	"31.0"	"40.9"	""	"1115"	"32"	"37.000"	"30.000"	"0.0375184485878507"	"19"	"0"	"1.847E-05"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISFLENNLEQLTK"	"[K].iSFLENNLEQLTk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"3"	"3"	"0.9016"	"0.0000"	"1"	"1"	"1"	"669.72235"	"2007.15250"	"2007.15266"	"-0.08"	"-0.00005"	"14/130"	"14"	"130"	"1060043.89672852"	"HCD"	"MS2"	"7.522271"	"36.7"	"100.000"	"77.1915"	"25899"	"25899"	"25881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.2"	""	"42.2"	""	"50.9"	""	"63.5"	""	"71.0"	"69.8"	""	"893"	"61"	"36.000"	"29.000"	"3.26453600775346E-05"	"23"	"0"	"5.46E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISFLENNLEQLTK"	"[K].iSFLENNLEQLTk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"3"	"3"	"0.1538"	"0.0000"	"1"	"1"	"1"	"669.72247"	"2007.15287"	"2007.15266"	"0.10"	"0.00007"	"11/130"	"11"	"130"	"581930.109436035"	"HCD"	"MS2"	"12.75513"	"22.1"	"100.000"	"77.2365"	"25969"	"25969"	"25941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.9"	""	"26.5"	""	"29.9"	""	"36.2"	""	"38.2"	"50.3"	""	"890"	"13"	"36.000"	"29.000"	"2.19462342759946"	"25"	"0.0006037"	"0.003863"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISFLENNLEQLTK"	"[K].iSFLENNLEQLTk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1004.08051"	"2007.15373"	"2007.15266"	"0.53"	"0.00054"	"9/130"	"9"	"130"	"178972.76361084"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"77.0947"	"25860"	"25860"	"25833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.4"	""	"20.4"	""	"17.6"	""	"27.9"	""	"40.4"	"28.5"	""	"882"	"52"	"36.000"	"29.000"	"0.000268805771682915"	"16"	"0"	"0.0001214"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISFLENNLEQLTK"	"[K].iSFLENNLEQLTk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"1004.08057"	"2007.15386"	"2007.15266"	"0.59"	"0.00060"	"13/130"	"13"	"130"	"130479.02947998"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"77.0405"	"25889"	"25889"	"25861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.5"	""	"14.1"	""	"12.7"	""	"19.3"	""	"21.4"	"22.6"	""	"882"	"42"	"36.000"	"29.000"	"0.00280180940946619"	"16"	"0.0001308"	"0.0002531"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGFFELIPQDLIK"	"[K].eGFFELIPQDLIk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"669.72308"	"2007.15470"	"2007.15669"	"-0.99"	"-0.00066"	"12/122"	"12"	"122"	"278007.217285156"	"HCD"	"MS2"	"7.938561"	"10.1"	"100.000"	"90.0199"	"31078"	"31078"	"31065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.3"	""	"10.4"	""	"14.7"	""	"19.7"	""	"19.2"	"20.5"	""	"887"	"44"	"36.000"	"29.000"	"0.00191378710573114"	"17"	"0"	"0.0001174"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGFFELIPQDLIK"	"[K].eGFFELIPQDLIk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1004.08148"	"2007.15569"	"2007.15669"	"-0.50"	"-0.00050"	"7/122"	"7"	"122"	"167029.948730469"	"HCD"	"MS2"	"15.79734"	"10.5"	"100.000"	"89.9266"	"31042"	"31042"	"31033"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.1"	""	"15.0"	""	"11.9"	""	"19.5"	""	"20.1"	"20.9"	""	"883"	"31"	"36.000"	"29.000"	"0.0374050903343073"	"15"	"0.0001889"	"0.0006926"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGFFELIPQDLIK"	"[K].eGFFELIPQDLIk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"1004.08160"	"2007.15593"	"2007.15669"	"-0.38"	"-0.00038"	"9/122"	"9"	"122"	"119237.21685791"	"HCD"	"MS2"	"9.795835"	"5.4"	"100.000"	"89.8676"	"30986"	"30986"	"30973"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"7.4"	""	"6.7"	""	"6.6"	""	"13.8"	"13.8"	""	"883"	"10"	"36.000"	"29.000"	"4.38460735377842"	"18"	"0.000523"	"0.003188"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGFFELIPQDLIK"	"[K].eGFFELIPQDLIk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"669.72382"	"2007.15689"	"2007.15669"	"0.10"	"0.00007"	"12/122"	"12"	"122"	"259665.003479004"	"HCD"	"MS2"	"3.467227"	"9.4"	"100.000"	"89.8977"	"30998"	"30998"	"30983"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"9.0"	""	"13.3"	""	"17.8"	""	"19.4"	"21.5"	""	"866"	"45"	"36.000"	"29.000"	"0.00133194992078273"	"17"	"0"	"7.814E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGFFELIPQDLIK"	"[K].eGFFELIPQDLIk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.72424"	"2007.15818"	"2007.15669"	"0.74"	"0.00050"	"11/122"	"11"	"122"	"297593.519714355"	"HCD"	"MS2"	"20.76777"	"10.2"	"100.000"	"89.6024"	"30883"	"30883"	"30866"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.4"	""	"11.4"	""	"12.9"	""	"17.9"	""	"18.9"	"23.8"	""	"854"	"33"	"36.000"	"29.000"	"0.023628049663512"	"15"	"0"	"0.0001733"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGFFELIPQDLIK"	"[K].eGFFELIPQDLIk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.72443"	"2007.15873"	"2007.15669"	"1.02"	"0.00068"	"8/122"	"8"	"122"	"207200.682739258"	"HCD"	"MS2"	"18.57488"	"7.2"	"100.000"	"89.6996"	"30959"	"30959"	"30944"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"12.5"	""	"7.8"	""	"12.5"	""	"15.3"	"11.7"	""	"831"	"20"	"36.000"	"29.000"	"0.388661057608308"	"14"	"0.0001889"	"0.0006799"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYAGVFMDAGLTFK"	"[K].nYAGVFmDAGLTFk.[T]"	"N-Term(TMT6plex); M7(Oxidation); K14(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"670.02368"	"2008.05649"	"2008.06141"	"-2.45"	"-0.00164"	"14/138"	"14"	"138"	"3144313.57977295"	"HCD"	"MS2"	"38.12583"	"119.8"	"100.000"	"67.2534"	"21860"	"21860"	"21843"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.0"	""	"184.9"	""	"157.7"	""	"253.1"	""	"192.0"	"197.4"	""	"1195"	"29"	"37.000"	"30.000"	"0.0710130080893619"	"16"	"0"	"1.851E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYAGVFMDAGLTFK"	"[K].nYAGVFmDAGLTFk.[T]"	"N-Term(TMT6plex); M7(Oxidation); K14(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"670.02441"	"2008.05869"	"2008.06141"	"-1.35"	"-0.00091"	"17/138"	"17"	"138"	"4198035.40008545"	"HCD"	"MS2"	"43.59542"	"139.2"	"100.000"	"67.1605"	"21871"	"21871"	"21862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.9"	""	"196.4"	""	"175.1"	""	"303.7"	""	"218.9"	"238.6"	""	"1210"	"30"	"37.000"	"30.000"	"0.0603608538612644"	"16"	"0"	"1.534E-05"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYAGVFMDAGLTFK"	"[K].nYAGVFmDAGLTFk.[T]"	"N-Term(TMT6plex); M7(Oxidation); K14(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"670.02631"	"2008.06437"	"2008.06141"	"1.47"	"0.00099"	"11/138"	"11"	"138"	"1684082.00372314"	"HCD"	"MS2"	"0"	"79.5"	"100.000"	"67.5497"	"21976"	"21976"	"21955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.2"	""	"102.0"	""	"93.7"	""	"168.7"	"0.4"	"140.2"	"148.7"	""	"1239"	"25"	"37.000"	"30.000"	"0.183671304581033"	"16"	"0.0001308"	"0.0002992"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPELFEALGIAQPK"	"[K].hPELFEALGIAQPk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"670.05927"	"2008.16324"	"2008.16317"	"0.04"	"0.00002"	"8/114"	"8"	"114"	"3029904.56878662"	"HCD"	"MS2"	"17.28515"	"87.6"	"100.000"	"56.0229"	"17279"	"17279"	"17259"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.4"	""	"111.4"	""	"116.6"	""	"145.5"	""	"176.6"	"168.8"	""	"858"	"41"	"36.000"	"29.000"	"0.00356005979263687"	"17"	"0"	"7.17E-06"	"1.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPELFEALGIAQPK"	"[K].hPELFEALGIAQPk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"3"	"3"	"0.9828"	"0.0000"	"1"	"1"	"1"	"670.05945"	"2008.16379"	"2008.16317"	"0.31"	"0.00021"	"9/114"	"9"	"114"	"3461695.10839844"	"HCD"	"MS2"	"6.68883"	"94.7"	"100.000"	"56.2008"	"17406"	"17406"	"17381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.1"	""	"109.5"	""	"128.1"	""	"174.3"	""	"185.0"	"196.3"	""	"854"	"58"	"36.000"	"29.000"	"6.97313181750881E-05"	"17"	"0"	"1.567E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGYSPIMLTALATLK"	"[R].aGYSPIMLTALATLk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"670.06885"	"2008.19199"	"2008.19169"	"0.15"	"0.00010"	"14/130"	"14"	"130"	"1029383.9553833"	"HCD"	"MS2"	"63.50858"	"41.6"	"100.000"	"85.2017"	"29166"	"29166"	"29147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.8"	""	"35.1"	""	"36.5"	""	"23.1"	""	"214.7"	"62.7"	""	"600"	"27"	"34.000"	"27.000"	"0.067007166684916"	"16"	"0"	"1.747E-05"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISWYDNEYGYSNR"	"[K].lISWYDNEYGYSNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"1004.98303"	"2008.95879"	"2008.96022"	"-0.71"	"-0.00072"	"13/136"	"13"	"136"	"824468.910522461"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"60.4958"	"19102"	"19102"	"19081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.2"	""	"68.8"	""	"67.5"	""	"53.6"	""	"79.1"	"71.9"	""	"771"	"51"	"35.000"	"28.000"	"0.000301317518668801"	"21"	"0"	"3.147E-06"	"1.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISWYDNEYGYSNR"	"[K].lISWYDNEYGYSNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"1004.98401"	"2008.96074"	"2008.96022"	"0.26"	"0.00026"	"12/136"	"12"	"136"	"1283746.76580811"	"HCD"	"MS2"	"0"	"67.1"	"100.000"	"60.1846"	"18975"	"18975"	"18953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.4"	""	"100.0"	""	"94.2"	""	"83.2"	""	"85.9"	"114.1"	""	"783"	"40"	"35.000"	"28.000"	"0.00382588372004199"	"20"	"0"	"8.509E-06"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISWYDNEYGYSNR"	"[K].lISWYDNEYGYSNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1004.98444"	"2008.96160"	"2008.96022"	"0.68"	"0.00069"	"11/136"	"11"	"136"	"713629.431152344"	"HCD"	"MS2"	"3.39126"	"40.0"	"100.000"	"60.6663"	"19225"	"19225"	"19203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.2"	""	"59.0"	""	"54.4"	""	"51.5"	""	"61.4"	"71.6"	""	"781"	"34"	"35.000"	"28.000"	"0.0141130551360769"	"15"	"0"	"3.681E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISWYDNEYGYSNR"	"[K].lISWYDNEYGYSNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"1004.98474"	"2008.96221"	"2008.96022"	"0.99"	"0.00099"	"13/136"	"13"	"136"	"1525022.66674805"	"HCD"	"MS2"	"11.40366"	"78.9"	"100.000"	"60.3340"	"19090"	"19090"	"19059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.4"	""	"118.9"	""	"116.0"	""	"96.6"	""	"119.1"	"124.4"	""	"779"	"50"	"35.000"	"28.000"	"0.000378013632242118"	"22"	"0"	"1.053E-05"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WELNPGDGAFYGPK"	"[K].wELNPGDGAFYGPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"670.35516"	"2009.05094"	"2009.05328"	"-1.17"	"-0.00078"	"12/134"	"12"	"134"	"2884390.36193848"	"HCD"	"MS2"	"10.2443"	"89.3"	"100.000"	"62.4091"	"19937"	"19937"	"19907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.2"	""	"118.0"	""	"139.6"	""	"143.8"	""	"160.9"	"167.8"	""	"1197"	"35"	"37.000"	"30.000"	"0.017703704612311"	"18"	"0.0001889"	"0.0004251"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WELNPGDGAFYGPK"	"[K].wELNPGDGAFYGPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"3"	"3"	"0.8226"	"0.0000"	"1"	"1"	"1"	"670.35565"	"2009.05240"	"2009.05328"	"-0.44"	"-0.00029"	"15/134"	"15"	"134"	"2384856.20440674"	"HCD"	"MS2"	"12.80431"	"75.8"	"100.000"	"62.2701"	"19827"	"19827"	"19801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.1"	""	"106.8"	""	"113.8"	""	"116.1"	"2.6"	"136.1"	"140.6"	""	"1209"	"62"	"37.000"	"30.000"	"4.10578595917088E-05"	"28"	"0"	"2.993E-06"	"1.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WELNPGDGAFYGPK"	"[K].wELNPGDGAFYGPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"1005.03033"	"2009.05339"	"2009.05328"	"0.05"	"0.00005"	"13/134"	"13"	"134"	"308661.052612305"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"62.3185"	"19847"	"19847"	"19817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.5"	""	"34.5"	""	"37.0"	""	"38.2"	""	"39.7"	"45.0"	""	"1203"	"36"	"37.000"	"30.000"	"0.0167585188293081"	"21"	"0.0001308"	"0.0003042"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDTVASDMMVLLK"	"[K].dLDTVASDMMVLLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"670.37238"	"2009.10257"	"2009.10631"	"-1.86"	"-0.00124"	"9/118"	"9"	"118"	"260240.771179199"	"HCD"	"MS2"	"15.64474"	"7.4"	"100.000"	"95.7404"	"32959"	"32959"	"32956"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"5.2"	""	"15.5"	""	"12.1"	""	"10.8"	"16.8"	""	"1140"	"27"	"37.000"	"30.000"	"0.110122194069965"	"24"	"0.0001308"	"0.0002919"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDTVASDMMVLLK"	"[K].dLDTVASDMMVLLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"670.37274"	"2009.10367"	"2009.10631"	"-1.31"	"-0.00088"	"9/118"	"9"	"118"	"255704.312011719"	"HCD"	"MS2"	"14.01519"	"7.7"	"100.000"	"95.5535"	"32889"	"32889"	"32885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.4"	""	"7.4"	""	"11.1"	""	"13.6"	""	"16.7"	"16.2"	""	"1164"	"24"	"37.000"	"30.000"	"0.20697742740715"	"20"	"0.0001889"	"0.0008201"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDTVASDMMVLLK"	"[K].dLDTVASDMMVLLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1005.05560"	"2009.10393"	"2009.10631"	"-1.18"	"-0.00119"	"6/118"	"6"	"118"	"81780.5136108398"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"95.8217"	"32981"	"32981"	"32975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.7"	""	"2.3"	""	"8.0"	""	"5.2"	""	"5.3"	"6.0"	""	"1159"	"22"	"37.000"	"30.000"	"0.346779519337455"	"14"	"0.0008125"	"0.00788"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDTVASDMMVLLK"	"[K].dLDTVASDMMVLLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"1005.05634"	"2009.10539"	"2009.10631"	"-0.45"	"-0.00046"	"5/118"	"5"	"118"	"109073.004089355"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"95.6073"	"32905"	"32905"	"32900"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"4.1"	""	"5.4"	""	"5.1"	""	"4.4"	"6.3"	""	"1149"	"17"	"37.000"	"30.000"	"1.18110914739289"	"16"	"0.001966"	"0.028"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDTVASDMMVLLK"	"[K].dLDTVASDMMVLLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1005.05640"	"2009.10552"	"2009.10631"	"-0.39"	"-0.00039"	"4/118"	"4"	"118"	"65203.6873168945"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"95.8637"	"32978"	"32978"	"32974"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"3.9"	""	"4.9"	""	"5.9"	""	"6.1"	"5.0"	""	"1142"	"9"	"37.000"	"30.000"	"7.97326334162941"	"13"	"0.006502"	"0.2381"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDTVASDMMVLLK"	"[K].dLDTVASDMMVLLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"670.37354"	"2009.10605"	"2009.10631"	"-0.13"	"-0.00008"	"9/118"	"9"	"118"	"287725.068908691"	"HCD"	"MS2"	"9.423265"	"7.3"	"100.000"	"95.9976"	"33026"	"33026"	"33023"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"7.6"	""	"11.1"	""	"10.2"	""	"11.0"	"19.1"	""	"1137"	"45"	"37.000"	"30.000"	"0.0019086683369712"	"27"	"0.0001889"	"0.000687"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDTVASDMMVLLK"	"[K].dLDTVASDMMVLLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"670.37372"	"2009.10660"	"2009.10631"	"0.15"	"0.00010"	"12/118"	"12"	"118"	"453900.719726563"	"HCD"	"MS2"	"9.473173"	"14.9"	"100.000"	"95.8070"	"32960"	"32960"	"32956"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.4"	""	"24.7"	""	"20.0"	""	"21.7"	""	"26.4"	"27.3"	""	"1127"	"48"	"37.000"	"30.000"	"0.000988311662787831"	"22"	"0"	"3.971E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVSELLLSYESSK"	"[K].vPVSELLLSYESSk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5FVQ9"	"Tubulin-specific chaperone E OS=Rattus norvegicus OX=10116 GN=Tbce PE=2 SV=1"	"Q5FVQ9"	"Tubulin-specific chaperone E OS=Rattus norvegicus OX=10116 GN=Tbce PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.39026"	"2009.15622"	"2009.15708"	"-0.43"	"-0.00029"	"12/122"	"12"	"122"	"1283827.03131104"	"HCD"	"MS2"	"16.42546"	"47.5"	"100.000"	"74.2800"	"24774"	"24774"	"24751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.7"	""	"44.9"	""	"62.7"	""	"87.3"	"0.9"	"104.4"	"99.0"	""	"853"	"43"	"36.000"	"29.000"	"0.00193160817828895"	"15"	"0"	"3.75E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVSELLLSYESSK"	"[K].vPVSELLLSYESSk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5FVQ9"	"Tubulin-specific chaperone E OS=Rattus norvegicus OX=10116 GN=Tbce PE=2 SV=1"	"Q5FVQ9"	"Tubulin-specific chaperone E OS=Rattus norvegicus OX=10116 GN=Tbce PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.39093"	"2009.15824"	"2009.15708"	"0.58"	"0.00039"	"11/122"	"11"	"122"	"1110768.32495117"	"HCD"	"MS2"	"33.43675"	"54.2"	"100.000"	"74.3772"	"24762"	"24762"	"24737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.1"	""	"62.8"	""	"67.3"	""	"106.0"	""	"110.5"	"118.7"	""	"821"	"21"	"36.000"	"29.000"	"0.315728045737653"	"14"	"0.0001308"	"0.0002943"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTFASATLLFQK"	"[K].lDPTFASATLLFQk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1005.58588"	"2010.16448"	"2010.16758"	"-1.55"	"-0.00155"	"11/120"	"11"	"120"	"327601.561096191"	"HCD"	"MS2"	"100"	"28.7"	"100.000"	"82.2661"	"28020"	"28020"	"27998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.4"	""	"30.8"	""	"41.6"	""	"49.6"	""	"58.2"	"55.3"	""	"815"	"27"	"36.000"	"29.000"	"0.0832008212452834"	"14"	"0.0001889"	"0.001083"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTFASATLLFQK"	"[K].lDPTFASATLLFQk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"670.72687"	"2010.16605"	"2010.16758"	"-0.76"	"-0.00051"	"11/120"	"11"	"120"	"1274529.94024658"	"HCD"	"MS2"	"20.49"	"37.1"	"100.000"	"82.6098"	"28160"	"28160"	"28141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.6"	""	"49.7"	""	"57.7"	""	"45.6"	"2.1"	"72.5"	"72.6"	""	"792"	"34"	"35.000"	"28.000"	"0.015910916109618"	"27"	"0"	"2.076E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTFASATLLFQK"	"[K].lDPTFASATLLFQk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"670.72693"	"2010.16623"	"2010.16758"	"-0.67"	"-0.00045"	"15/120"	"15"	"120"	"4324903.41265869"	"HCD"	"MS2"	"21.49454"	"107.5"	"100.000"	"82.2642"	"27969"	"27969"	"27952"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.3"	""	"143.4"	""	"145.5"	""	"191.3"	""	"196.1"	"195.4"	""	"794"	"33"	"35.000"	"28.000"	"0.0201739298696543"	"21"	"0"	"9.879E-06"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTFASATLLFQK"	"[K].lDPTFASATLLFQk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"670.72705"	"2010.16660"	"2010.16758"	"-0.49"	"-0.00033"	"12/120"	"12"	"120"	"4067016.56329346"	"HCD"	"MS2"	"35.32724"	"99.4"	"100.000"	"82.2568"	"28016"	"28016"	"27998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.5"	""	"131.8"	""	"135.9"	""	"166.1"	""	"181.8"	"186.6"	""	"791"	"33"	"35.000"	"28.000"	"0.0192817517835889"	"21"	"0"	"5.946E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTFASATLLFQK"	"[K].lDPTFASATLLFQk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.5185"	"0.0000"	"1"	"1"	"1"	"670.72748"	"2010.16788"	"2010.16758"	"0.15"	"0.00010"	"11/120"	"11"	"120"	"1593335.22131348"	"HCD"	"MS2"	"22.01673"	"45.9"	"100.000"	"82.5876"	"28100"	"28100"	"28080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.6"	""	"59.7"	""	"68.9"	""	"65.8"	""	"93.8"	"85.2"	""	"771"	"27"	"35.000"	"28.000"	"0.0831810469728353"	"27"	"0"	"9.253E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTFASATLLFQK"	"[K].lDPTFASATLLFQk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1005.58807"	"2010.16887"	"2010.16758"	"0.64"	"0.00064"	"9/120"	"9"	"120"	"160230.368164063"	"HCD"	"MS2"	"18.34392"	"13.6"	"100.000"	"82.2179"	"27950"	"27950"	"27920"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.2"	""	"15.7"	""	"14.7"	""	"18.9"	""	"30.7"	"30.2"	""	"763"	"17"	"35.000"	"28.000"	"0.705495978140137"	"14"	"0.0006037"	"0.005541"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPTFASATLLFQK"	"[K].lDPTFASATLLFQk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"1005.58844"	"2010.16960"	"2010.16758"	"1.00"	"0.00101"	"9/120"	"9"	"120"	"133542.75201416"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"82.5158"	"28071"	"28071"	"28048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"14.4"	""	"14.5"	""	"12.6"	"1.7"	"18.2"	"22.5"	""	"758"	"21"	"35.000"	"28.000"	"0.336232128562387"	"17"	"0.0004166"	"0.002304"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"1005.59857"	"2010.18987"	"2010.19274"	"-1.43"	"-0.00143"	"6/112"	"6"	"112"	"111190.888244629"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"90.3206"	"31187"	"31187"	"31178"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.7"	""	"10.0"	""	"10.9"	""	"7.5"	""	"6.7"	"5.8"	""	"594"	"20"	"34.000"	"27.000"	"0.270244241971779"	"25"	"0.0006037"	"0.005661"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"670.73517"	"2010.19095"	"2010.19274"	"-0.89"	"-0.00059"	"11/112"	"11"	"112"	"451275.861694336"	"HCD"	"MS2"	"7.325116"	"14.9"	"100.000"	"90.3138"	"31184"	"31184"	"31178"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.6"	""	"19.7"	""	"23.9"	""	"29.3"	""	"25.5"	"25.3"	""	"587"	"18"	"34.000"	"27.000"	"0.443208525247178"	"17"	"0.0001308"	"0.0002398"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1005.59924"	"2010.19121"	"2010.19274"	"-0.76"	"-0.00076"	"6/112"	"6"	"112"	"65896.0458374023"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"90.8536"	"31374"	"31374"	"31364"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.8"	""	"3.0"	""	"4.7"	""	"3.2"	""	"2.8"	"3.5"	""	"575"	"6"	"34.000"	"27.000"	"6.9444498990292"	"13"	"0.00103"	"0.01301"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"1005.59949"	"2010.19170"	"2010.19274"	"-0.52"	"-0.00052"	"14/112"	"14"	"112"	"498540.051757813"	"HCD"	"MS2"	"0"	"32.9"	"100.000"	"90.5861"	"31282"	"31282"	"31273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.6"	""	"51.9"	""	"60.8"	""	"56.7"	""	"47.3"	"50.1"	""	"596"	"43"	"34.000"	"27.000"	"0.00141976434068014"	""	"0"	"6.128E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"670.73553"	"2010.19205"	"2010.19274"	"-0.34"	"-0.00023"	"7/112"	"7"	"112"	"233313.370544434"	"HCD"	"MS2"	"12.44873"	"9.3"	"100.000"	"90.8490"	"31372"	"31372"	"31364"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.8"	""	"14.2"	""	"13.0"	""	"15.9"	""	"16.8"	"17.8"	""	"596"	"24"	"34.000"	"27.000"	"0.113035865522157"	"26"	"0.0001859"	"0.0003284"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.4783"	"0.0000"	"1"	"1"	"1"	"670.73560"	"2010.19223"	"2010.19274"	"-0.25"	"-0.00017"	"7/112"	"7"	"112"	"265091.42791748"	"HCD"	"MS2"	"16.81491"	"8.7"	"100.000"	"90.7080"	"31292"	"31292"	"31288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.7"	""	"11.8"	""	"13.0"	""	"15.9"	""	"11.4"	"18.2"	""	"596"	"23"	"34.000"	"27.000"	"0.140351243266292"	"26"	"0.0001308"	"0.0002571"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"1005.59985"	"2010.19243"	"2010.19274"	"-0.15"	"-0.00015"	"15/112"	"15"	"112"	"609136.36126709"	"HCD"	"MS2"	"1.264931"	"38.6"	"100.000"	"90.4305"	"31197"	"31197"	"31187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.4"	""	"67.0"	""	"60.8"	""	"64.9"	"0.9"	"64.6"	"52.0"	""	"596"	"37"	"34.000"	"27.000"	"0.00600089826458991"	"26"	"0"	"7.572E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"670.73566"	"2010.19242"	"2010.19274"	"-0.16"	"-0.00011"	"12/112"	"12"	"112"	"2104009.23114014"	"HCD"	"MS2"	"0.2293271"	"49.3"	"100.000"	"90.5816"	"31281"	"31281"	"31273"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.0"	""	"68.2"	""	"93.4"	""	"83.9"	""	"80.3"	"75.8"	""	"596"	"26"	"34.000"	"27.000"	"0.0750267724472139"	"24"	"0"	"6.702E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.6207"	"0.0000"	"1"	"1"	"1"	"670.73572"	"2010.19260"	"2010.19274"	"-0.07"	"-0.00005"	"8/112"	"8"	"112"	"281607.957092285"	"HCD"	"MS2"	"18.18482"	"9.7"	"100.000"	"90.1542"	"31094"	"31094"	"31087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.5"	""	"14.8"	""	"13.3"	""	"19.4"	""	"15.0"	"16.2"	""	"589"	"29"	"34.000"	"27.000"	"0.0365666604585965"	"25"	"0.0001889"	"0.0004929"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"3"	"3"	"0.4783"	"0.0000"	"1"	"1"	"1"	"670.73578"	"2010.19278"	"2010.19274"	"0.02"	"0.00002"	"14/112"	"14"	"112"	"2431199.11499023"	"HCD"	"MS2"	"0.6265218"	"59.9"	"100.000"	"90.4261"	"31196"	"31196"	"31187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.9"	""	"89.0"	""	"107.9"	""	"97.6"	"0.9"	"103.0"	"87.9"	""	"588"	"23"	"34.000"	"27.000"	"0.13345883529516"	"26"	"0"	"4.691E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEEIYLFSLPIK"	"[K].sLEEIYLFSLPIk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"1005.60028"	"2010.19328"	"2010.19274"	"0.27"	"0.00027"	"7/112"	"7"	"112"	"89627.9916381836"	"HCD"	"MS2"	"25.11216"	"3.8"	"100.000"	"90.1632"	"31098"	"31098"	"31087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.2"	""	"6.2"	""	"6.4"	""	"4.5"	""	"4.6"	"5.8"	""	"586"	"13"	"34.000"	"27.000"	"1.56267124377873"	"15"	"0.00103"	"0.0117"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9853"	"0.0000"	"1"	"1"	"1"	"1006.06195"	"2011.11662"	"2011.11859"	"-0.98"	"-0.00098"	"16/128"	"16"	"128"	"259394.045471191"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"63.8005"	"20452"	"20452"	"20425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.0"	""	"16.8"	""	"25.4"	""	"44.1"	""	"28.5"	"24.9"	""	"1091"	"68"	"37.000"	"30.000"	"8.68549860606412E-06"	"18"	"0.0001889"	"0.0004338"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"671.04395"	"2011.11728"	"2011.11859"	"-0.65"	"-0.00043"	"11/128"	"11"	"128"	"3994736.0022583"	"HCD"	"MS2"	"9.061109"	"114.0"	"100.000"	"63.2088"	"20263"	"20263"	"20243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.8"	""	"141.6"	""	"157.9"	""	"240.2"	"3.4"	"193.1"	"201.5"	""	"1079"	"37"	"37.000"	"30.000"	"0.0119947568600643"	"23"	"0"	"9.756E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"671.04407"	"2011.11765"	"2011.11859"	"-0.47"	"-0.00031"	"9/128"	"9"	"128"	"4977939.92596436"	"HCD"	"MS2"	"0"	"126.0"	"100.000"	"63.7525"	"20485"	"20485"	"20467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.9"	""	"141.4"	""	"164.5"	""	"322.4"	"1.7"	"221.6"	"203.3"	""	"1078"	"41"	"37.000"	"30.000"	"0.00449354158509983"	"26"	"0"	"2.509E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"1006.06281"	"2011.11833"	"2011.11859"	"-0.13"	"-0.00013"	"15/128"	"15"	"128"	"269160.91394043"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"63.0950"	"20164"	"20164"	"20137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.5"	""	"17.5"	""	"29.4"	""	"54.1"	""	"32.4"	"34.7"	""	"1074"	"57"	"37.000"	"30.000"	"0.00011533849646081"	"23"	"0.0001889"	"0.0004019"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"1006.06293"	"2011.11858"	"2011.11859"	"0.00"	"0.00000"	"18/128"	"18"	"128"	"327172.191955566"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"63.7411"	"20481"	"20481"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.4"	""	"18.5"	""	"24.2"	""	"57.4"	""	"32.4"	"36.9"	""	"1090"	"61"	"37.000"	"30.000"	"4.62803358894791E-05"	"28"	"0.0001889"	"0.0006754"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"671.04449"	"2011.11893"	"2011.11859"	"0.17"	"0.00011"	"9/128"	"9"	"128"	"4823802.87341309"	"HCD"	"MS2"	"12.78419"	"131.3"	"100.000"	"63.1156"	"20172"	"20172"	"20153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.5"	""	"173.8"	""	"179.0"	""	"275.1"	""	"225.4"	"238.6"	""	"1096"	"26"	"37.000"	"30.000"	"0.135762728758304"	"17"	"0"	"0.0001534"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFAPEEISAMVLTK"	"[K].tFAPEEISAmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"671.04504"	"2011.12058"	"2011.11859"	"0.99"	"0.00066"	"14/128"	"14"	"128"	"4671144.48974609"	"HCD"	"MS2"	"0"	"108.6"	"100.000"	"63.7063"	"20413"	"20413"	"20393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.1"	""	"121.6"	""	"135.1"	""	"302.8"	""	"172.6"	"180.1"	""	"1088"	"42"	"37.000"	"30.000"	"0.00366099301018669"	"27"	"0"	"3.753E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFCVFEQNQGLPLR"	"[R].dAFcVFEQNQGLPLR.[R]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.33545"	"2011.99179"	"2011.99312"	"-0.66"	"-0.00044"	"15/138"	"15"	"138"	"629813.853881836"	"HCD"	"MS2"	"4.61727"	"20.3"	"100.000"	"73.7843"	"24572"	"24572"	"24543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.2"	""	"25.8"	""	"31.5"	""	"31.9"	""	"32.9"	"43.0"	""	"980"	"28"	"36.000"	"29.000"	"0.0771251603588448"	"14"	"0"	"6.94E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFCVFEQNQGLPLR"	"[R].dAFcVFEQNQGLPLR.[R]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.33588"	"2011.99308"	"2011.99312"	"-0.02"	"-0.00001"	"7/138"	"7"	"138"	"809796.38269043"	"HCD"	"MS2"	"22.26031"	"23.7"	"100.000"	"73.7174"	"24493"	"24493"	"24465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.2"	""	"28.1"	""	"30.5"	""	"39.5"	""	"46.6"	"53.9"	""	"976"	"38"	"36.000"	"29.000"	"0.00766337048514773"	"15"	"0"	"2.653E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSPSQIGAFVLMK"	"[K].lYSPSQIGAFVLMk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.39319"	"2012.16501"	"2012.16548"	"-0.23"	"-0.00015"	"8/124"	"8"	"124"	"374211.456176758"	"HCD"	"MS2"	"14.7085"	"16.6"	"100.000"	"81.7559"	"27812"	"27812"	"27790"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.9"	""	"20.5"	""	"27.7"	""	"24.1"	""	"29.8"	"31.2"	""	"798"	"33"	"36.000"	"29.000"	"0.0215760974855287"	"15"	"0.0001889"	"0.0006002"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSPSQIGAFVLMK"	"[K].lYSPSQIGAFVLMk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.39447"	"2012.16886"	"2012.16548"	"1.68"	"0.00113"	"14/124"	"14"	"124"	"441028.077880859"	"HCD"	"MS2"	"28.69993"	"18.5"	"100.000"	"81.7446"	"27757"	"27757"	"27728"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.9"	""	"23.7"	""	"30.0"	""	"21.7"	""	"37.6"	"37.2"	""	"763"	"40"	"35.000"	"28.000"	"0.00362655728779871"	"15"	"0"	"0.000155"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPVGGHILSYLLEK"	"[K].gAPVGGHILSYLLEk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.40228"	"2012.19229"	"2012.19447"	"-1.08"	"-0.00072"	"6/120"	"6"	"120"	"3216629.75622559"	"HCD"	"MS2"	"13.75371"	"86.2"	"100.000"	"65.1908"	"21073"	"21073"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.6"	""	"112.5"	""	"119.6"	""	"135.0"	"1.3"	"158.7"	"182.2"	""	"613"	"34"	"34.000"	"27.000"	"0.0111027479014718"	"15"	"0"	"1.055E-05"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAPVGGHILSYLLEK"	"[K].gAPVGGHILSYLLEk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.40344"	"2012.19577"	"2012.19447"	"0.65"	"0.00044"	"8/120"	"8"	"120"	"2036727.0020752"	"HCD"	"MS2"	"35.54123"	"62.8"	"100.000"	"65.2173"	"21031"	"21031"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.5"	""	"76.1"	""	"89.2"	""	"94.7"	"1.4"	"124.6"	"130.6"	""	"579"	"33"	"34.000"	"27.000"	"0.0141790968207165"	"15"	"0"	"1.728E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KADGVPLPIGMVK"	"[R].kADGVPLPIGMVk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.42279"	"2012.25382"	"2012.25452"	"-0.35"	"-0.00023"	"14/120"	"14"	"120"	"3615158.87677002"	"HCD"	"MS2"	"28.36791"	"155.7"	"100.000"	"51.8978"	"15614"	"15614"	"15586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"202.6"	""	"212.6"	""	"220.9"	""	"238.0"	""	"295.8"	"310.2"	""	"199"	"15"	"29.000"	"22.000"	"0.331759280699419"	"13"	"0.0001889"	"0.0009357"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KADGVPLPIGMVK"	"[R].kADGVPLPIGMVk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.42297"	"2012.25437"	"2012.25452"	"-0.07"	"-0.00005"	"17/120"	"17"	"120"	"10909010.4008789"	"HCD"	"MS2"	"9.101956"	"308.7"	"100.000"	"51.6075"	"15545"	"15545"	"15526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"396.4"	""	"451.0"	""	"409.5"	""	"370.2"	""	"600.9"	"705.2"	""	"199"	"29"	"29.000"	"22.000"	"0.0116097556897566"	"14"	"0"	"3.979E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KADGVPLPIGMVK"	"[R].kADGVPLPIGMVk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.42297"	"2012.25437"	"2012.25452"	"-0.07"	"-0.00005"	"16/120"	"16"	"120"	"11000558.0075684"	"HCD"	"MS2"	"8.622219"	"300.9"	"100.000"	"51.4194"	"15418"	"15418"	"15394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"381.5"	""	"438.4"	""	"422.4"	""	"350.7"	""	"589.3"	"679.4"	""	"199"	"26"	"29.000"	"22.000"	"0.0259910054762721"	"14"	"0"	"0.0001078"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFANAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8873"	"0.0000"	"1"	"1"	"1"	"671.71777"	"2013.13877"	"2013.14210"	"-1.65"	"-0.00111"	"18/144"	"18"	"144"	"10125090.015564"	"HCD"	"MS2"	"34.95194"	"305.1"	"100.000"	"71.1604"	"23500"	"23500"	"23482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"485.3"	""	"505.8"	""	"544.3"	""	"410.3"	"0.7"	"437.2"	"496.8"	""	"907"	"71"	"36.000"	"29.000"	"3.87772754293203E-06"	"25"	"0"	"6.947E-06"	"1.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFANAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"671.71808"	"2013.13968"	"2013.14210"	"-1.20"	"-0.00081"	"15/144"	"15"	"144"	"15260296.2165527"	"HCD"	"MS2"	"1.816794"	"124.0"	"30.277"	"71.4735"	"23628"	"23628"	"23610"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.8"	""	"197.4"	""	"212.8"	""	"173.9"	""	"177.4"	"235.1"	""	"924"	"68"	"36.000"	"29.000"	"6.78643940271467E-06"	"20"	"0"	"1.4E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFANAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1007.07361"	"2013.13994"	"2013.14210"	"-1.07"	"-0.00108"	"17/144"	"17"	"144"	"1690220.10015869"	"HCD"	"MS2"	"0"	"120.6"	"100.000"	"71.2067"	"23519"	"23519"	"23498"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.6"	""	"202.4"	""	"202.2"	""	"169.5"	""	"168.9"	"196.7"	""	"924"	"62"	"36.000"	"29.000"	"3.00359916938508E-05"	"17"	"0"	"8.947E-07"	"1.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFANAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8983"	"0.0000"	"1"	"1"	"1"	"671.71820"	"2013.14005"	"2013.14210"	"-1.02"	"-0.00068"	"14/144"	"14"	"144"	"7563522.27398682"	"HCD"	"MS2"	"23.87868"	"234.3"	"100.000"	"71.2335"	"23478"	"23478"	"23459"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.0"	""	"373.2"	""	"383.5"	""	"345.2"	""	"348.8"	"393.0"	""	"924"	"59"	"36.000"	"29.000"	"5.44053959766613E-05"	"22"	"0"	"8.002E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFANAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1007.07367"	"2013.14006"	"2013.14210"	"-1.01"	"-0.00102"	"17/144"	"17"	"144"	"681482.123291016"	"HCD"	"MS2"	"0"	"52.6"	"100.000"	"71.5178"	"23646"	"23646"	"23626"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.4"	""	"86.9"	""	"89.4"	""	"63.2"	""	"78.5"	"102.7"	""	"924"	"67"	"36.000"	"29.000"	"8.86424958189673E-06"	"17"	"0"	"1.179E-06"	"1.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFANAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"671.71857"	"2013.14115"	"2013.14210"	"-0.47"	"-0.00032"	"12/144"	"12"	"144"	"2823667.03662109"	"HCD"	"MS2"	"48.98317"	"83.3"	"100.000"	"71.9031"	"23752"	"23752"	"23731"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.3"	""	"111.3"	""	"118.0"	""	"144.4"	""	"155.0"	"154.1"	""	"922"	"13"	"36.000"	"29.000"	"2.58643116950969"	"19"	"0"	"0.000182"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFANAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9506"	"0.0000"	"1"	"1"	"1"	"671.71875"	"2013.14170"	"2013.14210"	"-0.20"	"-0.00013"	"18/144"	"18"	"144"	"19919259.9462891"	"HCD"	"MS2"	"7.864592"	"155.5"	"29.063"	"71.5400"	"23604"	"23604"	"23587"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"241.7"	""	"246.6"	""	"267.8"	""	"211.2"	""	"198.1"	"303.3"	""	"923"	"81"	"36.000"	"29.000"	"4.05668891517453E-07"	"21"	"0"	"9.062E-06"	"1.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFANAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9182"	"0.0000"	"1"	"1"	"1"	"1007.07489"	"2013.14250"	"2013.14210"	"0.20"	"0.00020"	"13/144"	"13"	"144"	"1222172.36901855"	"HCD"	"MS2"	"0"	"95.8"	"100.000"	"71.2820"	"23498"	"23498"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.1"	""	"152.9"	""	"164.7"	""	"134.9"	""	"125.6"	"156.8"	""	"905"	"110"	"36.000"	"29.000"	"5.01901603906237E-10"	"28"	"0"	"1.641E-07"	"1.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFANAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1007.07544"	"2013.14360"	"2013.14210"	"0.75"	"0.00075"	"14/144"	"14"	"144"	"741335.23626709"	"HCD"	"MS2"	"0"	"59.9"	"100.000"	"71.5836"	"23621"	"23621"	"23603"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.4"	""	"99.8"	""	"102.5"	""	"86.5"	""	"82.5"	"108.3"	""	"904"	"50"	"36.000"	"29.000"	"0.000408449562122481"	"16"	"0"	"2.332E-05"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASLLPFPQDVINK"	"[R].lASLLPFPQDVINk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P41738"	"Aryl hydrocarbon receptor OS=Rattus norvegicus OX=10116 GN=Ahr PE=1 SV=2"	"P41738"	"Aryl hydrocarbon receptor OS=Rattus norvegicus OX=10116 GN=Ahr PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"671.74225"	"2013.21219"	"2013.21487"	"-1.33"	"-0.00089"	"8/128"	"8"	"128"	"271891.315124512"	"HCD"	"MS2"	"24.58642"	"14.6"	"100.000"	"83.1180"	"28317"	"28317"	"28288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.8"	""	"17.0"	""	"19.5"	""	"23.8"	""	"26.4"	"30.5"	""	"449"	"27"	"33.000"	"26.000"	"0.0427775931182749"	"18"	"0.0001308"	"0.0002759"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIGGLSFETTDESLR"	"[K].lFIGGLSFETTDESLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"672.02710"	"2014.06675"	"2014.06944"	"-1.34"	"-0.00090"	"15/134"	"15"	"134"	"430628.083251953"	"HCD"	"MS2"	"23.55265"	"16.0"	"100.000"	"77.2146"	"25909"	"25909"	"25881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.0"	""	"19.5"	""	"19.8"	""	"31.2"	""	"31.4"	"30.0"	""	"1181"	"36"	"37.000"	"30.000"	"0.0133419682231549"	"19"	"0"	"1.211E-05"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIGGLSFETTDESLR"	"[K].lFIGGLSFETTDESLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"1007.53711"	"2014.06694"	"2014.06944"	"-1.24"	"-0.00125"	"3/134"	"3"	"134"	"63917.5502929688"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"77.1626"	"25939"	"25939"	"25909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.3"	""	"2.3"	""	"3.7"	""	"7.3"	""	"6.6"	"5.7"	""	"1178"	"1"	"37.000"	"30.000"	"46.1440059589298"	"13"	"0.00162"	"0.02234"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFAnAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); N4(Deamidated); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"672.04614"	"2014.12387"	"2014.12611"	"-1.11"	"-0.00075"	"9/144"	"9"	"144"	"3835655.88549805"	"HCD"	"MS2"	"67.83691"	"101.2"	"100.000"	"74.7070"	"24948"	"24948"	"24927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.0"	""	"128.3"	""	"148.7"	""	"157.1"	""	"206.7"	"198.7"	""	"1076"	"5"	"37.000"	"30.000"	"15.6236418810188"	"15"	"0.0001889"	"0.0009204"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFAnAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); N4(Deamidated); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"1007.56561"	"2014.12395"	"2014.12611"	"-1.08"	"-0.00108"	"13/144"	"13"	"144"	"196471.447692871"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"72.3689"	"23994"	"23994"	"23967"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.8"	""	"26.6"	""	"29.6"	""	"23.5"	""	"19.8"	"30.5"	""	"1076"	"60"	"37.000"	"30.000"	"5.63355158851385E-05"	"17"	"0"	"7.019E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFAnAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); N4(Deamidated); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"672.04639"	"2014.12461"	"2014.12611"	"-0.75"	"-0.00050"	"15/144"	"15"	"144"	"2249665.59234619"	"HCD"	"MS2"	"3.239946"	"74.7"	"100.000"	"72.4052"	"23957"	"23957"	"23937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.3"	""	"105.5"	""	"106.3"	""	"121.8"	"1.5"	"117.3"	"143.1"	""	"1084"	"56"	"37.000"	"30.000"	"0.000137403971772987"	"23"	"0"	"5.042E-06"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFANAYLSDLGGSIK"	"[K].vFAnAYLSDLGGSIk.[A]"	"N-Term(TMT6plex); N4(Deamidated); K15(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"1007.56616"	"2014.12505"	"2014.12611"	"-0.53"	"-0.00053"	"13/144"	"13"	"144"	"245581.567871094"	"HCD"	"MS2"	"100"	"19.9"	"100.000"	"72.4302"	"23968"	"23968"	"23937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.6"	""	"30.7"	""	"33.3"	""	"26.8"	""	"34.1"	"33.8"	""	"1085"	"38"	"37.000"	"30.000"	"0.00830614947962502"	"18"	"0"	"8.841E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGGPQMIQLSLDGK"	"[R].vPGGPQmIQLSLDGk.[R]"	"N-Term(TMT6plex); M7(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"672.05054"	"2014.13706"	"2014.14072"	"-1.82"	"-0.00122"	"11/134"	"11"	"134"	"4990836.34637451"	"HCD"	"MS2"	"20.02595"	"189.6"	"100.000"	"55.2209"	"17005"	"17005"	"16981"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"207.0"	""	"215.8"	""	"269.2"	""	"323.9"	""	"370.3"	"415.2"	""	"972"	"45"	"36.000"	"29.000"	"0.00162418789452692"	"23"	"0"	"6.265E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGGPQMIQLSLDGK"	"[R].vPGGPQmIQLSLDGk.[R]"	"N-Term(TMT6plex); M7(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"672.05170"	"2014.14054"	"2014.14072"	"-0.09"	"-0.00006"	"11/134"	"11"	"134"	"8958057.54699707"	"HCD"	"MS2"	"39.27831"	"460.3"	"100.000"	"55.0844"	"16895"	"16895"	"16875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"365.1"	""	"470.3"	""	"674.9"	""	"600.2"	""	"1049.9"	"1241.6"	""	"967"	"20"	"36.000"	"29.000"	"0.439943067317694"	"19"	"0.0001889"	"0.0007065"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGYPWTLVYGTGK"	"[R].tIGYPWTLVYGTGk.[H]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V8B0"	"Oxidation resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Oxr1 PE=1 SV=3"	"Q4V8B0"	"Oxidation resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Oxr1 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"672.05206"	"2014.14164"	"2014.14137"	"0.13"	"0.00009"	"9/126"	"9"	"126"	"519603.584716797"	"HCD"	"MS2"	"56.98595"	"23.8"	"100.000"	"73.9041"	"24621"	"24621"	"24591"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.1"	""	"33.7"	""	"36.2"	""	"37.7"	""	"41.2"	"46.3"	""	"967"	"28"	"36.000"	"29.000"	"0.0778747164608694"	"22"	"0.0001889"	"0.001001"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KASGPPVSELITK"	"[R].kASGPPVSELITk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.08850"	"2014.25095"	"2014.25154"	"-0.29"	"-0.00020"	"12/138"	"12"	"138"	"5035836.05407715"	"HCD"	"MS2"	"37.39495"	"196.3"	"100.000"	"40.3677"	"10969"	"10969"	"10941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"320.7"	""	"324.0"	""	"367.7"	""	"262.9"	"3.8"	"355.6"	"219.3"	""	"275"	"72"	"31.000"	"24.000"	"8.77612293512004E-07"	"17"	"0"	"2.722E-07"	"1.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KASGPPVSELITK"	"[R].kASGPPVSELITk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.08850"	"2014.25095"	"2014.25154"	"-0.29"	"-0.00020"	"12/138"	"12"	"138"	"7671802.88616943"	"HCD"	"MS2"	"0"	"279.4"	"100.000"	"40.2492"	"10876"	"10876"	"10853"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"439.7"	""	"458.5"	""	"564.6"	""	"384.9"	"0.3"	"488.5"	"300.9"	""	"275"	"40"	"31.000"	"24.000"	"0.00149383523247347"	"15"	"0"	"1.027E-06"	"1.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KASGPPVSELITK"	"[R].kASGPPVSELITk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.08893"	"2014.25223"	"2014.25154"	"0.34"	"0.00023"	"7/138"	"7"	"138"	"5081449.38000488"	"HCD"	"MS2"	"0"	"243.1"	"100.000"	"40.7494"	"11125"	"11125"	"11101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"353.8"	""	"384.2"	""	"432.7"	""	"365.8"	""	"432.9"	"330.6"	""	"267"	"40"	"31.000"	"24.000"	"0.00126032126984171"	"15"	"0"	"2.4E-06"	"1.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLIGSIPGPFGEEMR"	"[K].lPGLIGSIPGPFGEEmR.[G]"	"N-Term(TMT6plex); M16(Oxidation)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.36334"	"2015.07547"	"2015.08331"	"-3.89"	"-0.00261"	"14/144"	"14"	"144"	"568051.034851074"	"HCD"	"MS2"	"24.39889"	"11.5"	"100.000"	"77.2296"	"25966"	"25966"	"25941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.1"	""	"16.2"	""	"14.0"	""	"21.8"	""	"22.4"	"21.8"	""	"1229"	"26"	"37.000"	"30.000"	"0.143061207783515"	"14"	"0.0001889"	"0.0004747"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLIGSIPGPFGEEMR"	"[K].lPGLIGSIPGPFGEEmR.[G]"	"N-Term(TMT6plex); M16(Oxidation)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.36401"	"2015.07749"	"2015.08331"	"-2.89"	"-0.00194"	"13/144"	"13"	"144"	"590837.707397461"	"HCD"	"MS2"	"5.634072"	"12.6"	"100.000"	"77.2816"	"25936"	"25936"	"25913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.2"	""	"16.5"	""	"17.3"	""	"23.4"	""	"23.9"	"25.2"	""	"1221"	"28"	"37.000"	"30.000"	"0.105362403306002"	"14"	"0"	"0.0001095"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGLIGSIPGPFGEEMR"	"[K].lPGLIGSIPGPFGEEmR.[G]"	"N-Term(TMT6plex); M16(Oxidation)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.36566"	"2015.08243"	"2015.08331"	"-0.44"	"-0.00029"	"14/144"	"14"	"144"	"957395.641845703"	"HCD"	"MS2"	"6.501202"	"14.1"	"100.000"	"77.3333"	"26008"	"26008"	"25989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.2"	""	"17.5"	""	"17.4"	""	"26.4"	""	"26.8"	"32.3"	""	"1242"	"31"	"37.000"	"30.000"	"0.0501292953784529"	"14"	"0"	"0.0001311"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDIEPDIEALLSK"	"[R].tIDIEPDIEALLSk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"1008.08649"	"2015.16570"	"2015.16764"	"-0.97"	"-0.00097"	"13/128"	"13"	"128"	"185924.932922363"	"HCD"	"MS2"	"16.04025"	"13.7"	"100.000"	"89.6903"	"30956"	"30956"	"30944"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.9"	""	"17.2"	""	"19.8"	""	"26.0"	""	"22.2"	"21.9"	""	"841"	"39"	"36.000"	"29.000"	"0.00550510998621251"	"16"	"0"	"0.0001001"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDIEPDIEALLSK"	"[R].tIDIEPDIEALLSk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"672.39355"	"2015.16611"	"2015.16764"	"-0.76"	"-0.00051"	"6/128"	"6"	"128"	"164157.847045898"	"HCD"	"MS2"	"5.922829"	"7.1"	"100.000"	"89.3724"	"30794"	"30794"	"30785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"5.6"	""	"9.9"	""	"12.7"	""	"17.8"	"11.4"	""	"846"	"17"	"36.000"	"29.000"	"0.91062667378841"	"17"	"0.0003839"	"0.00159"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDIEPDIEALLSK"	"[R].tIDIEPDIEALLSk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"1008.08728"	"2015.16728"	"2015.16764"	"-0.18"	"-0.00018"	"14/128"	"14"	"128"	"279739.255371094"	"HCD"	"MS2"	"12.81164"	"22.5"	"100.000"	"89.5701"	"30870"	"30870"	"30857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.3"	""	"24.4"	""	"31.9"	""	"42.3"	""	"36.5"	"33.1"	""	"826"	"44"	"36.000"	"29.000"	"0.00176583471980605"	"17"	"0"	"8.215E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDIEPDIEALLSK"	"[R].tIDIEPDIEALLSk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"672.39417"	"2015.16794"	"2015.16764"	"0.15"	"0.00010"	"13/128"	"13"	"128"	"699165.181884766"	"HCD"	"MS2"	"1.051184"	"19.6"	"100.000"	"89.8074"	"30999"	"30999"	"30994"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.1"	""	"21.1"	""	"21.4"	""	"37.9"	""	"32.7"	"34.3"	""	"807"	"25"	"36.000"	"29.000"	"0.132997518863604"	"15"	"0"	"8.501E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDIEPDIEALLSK"	"[R].tIDIEPDIEALLSk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"672.39423"	"2015.16812"	"2015.16764"	"0.24"	"0.00016"	"7/128"	"7"	"128"	"246544.69128418"	"HCD"	"MS2"	"10.83117"	"8.6"	"100.000"	"89.5551"	"30903"	"30903"	"30890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.0"	""	"8.5"	""	"11.1"	""	"12.5"	""	"14.8"	"18.5"	""	"807"	"25"	"36.000"	"29.000"	"0.130570040571105"	"18"	"0.0001889"	"0.0006369"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDIEPDIEALLSK"	"[R].tIDIEPDIEALLSk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"672.39423"	"2015.16812"	"2015.16764"	"0.24"	"0.00016"	"15/128"	"15"	"128"	"1106929.07623291"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"89.6585"	"30905"	"30905"	"30897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.5"	""	"33.8"	""	"36.2"	""	"63.5"	""	"43.1"	"51.8"	""	"807"	"29"	"36.000"	"29.000"	"0.0479560648770837"	"16"	"0"	"7.058E-06"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIYIPLPDEK"	"[R].lDQLIYIPLPDEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"4"	"4"	"0.4483"	"0.0000"	"1"	"1"	"1"	"504.55048"	"2015.18007"	"2015.18290"	"-1.40"	"-0.00071"	"10/136"	"10"	"136"	"461299.730957031"	"HCD"	"MS2"	"23.57036"	"11.6"	"100.000"	"83.7466"	"28573"	"28573"	"28554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.2"	""	"17.0"	""	"15.7"	""	"15.8"	""	"24.1"	"20.4"	""	"691"	"29"	"35.000"	"28.000"	"0.0422131782586964"	""	"0"	"0.0001333"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIYIPLPDEK"	"[R].lDQLIYIPLPDEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"672.39832"	"2015.18039"	"2015.18290"	"-1.24"	"-0.00084"	"12/136"	"12"	"136"	"852864.924072266"	"HCD"	"MS2"	"20.41291"	"23.9"	"100.000"	"83.5985"	"28564"	"28564"	"28539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.5"	""	"34.3"	"2.0"	"35.2"	""	"38.1"	""	"43.5"	"43.2"	""	"687"	"37"	"35.000"	"28.000"	"0.00737779767863838"	"24"	"0"	"4.078E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIYIPLPDEK"	"[R].lDQLIYIPLPDEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"672.39850"	"2015.18094"	"2015.18290"	"-0.97"	"-0.00065"	"13/136"	"13"	"136"	"733224.689697266"	"HCD"	"MS2"	"6.329008"	"21.2"	"100.000"	"84.1882"	"28804"	"28804"	"28785"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.5"	""	"30.9"	""	"32.4"	""	"34.6"	""	"38.1"	"36.0"	""	"686"	"51"	"35.000"	"28.000"	"0.000283331016704972"	"28"	"0"	"6.638E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIYIPLPDEK"	"[R].lDQLIYIPLPDEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7111"	"0.0000"	"1"	"1"	"1"	"672.39856"	"2015.18113"	"2015.18290"	"-0.88"	"-0.00059"	"12/136"	"12"	"136"	"8813205.28430176"	"HCD"	"MS2"	"0"	"135.5"	"80.905"	"83.8840"	"28680"	"28680"	"28663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"226.7"	""	"181.2"	""	"205.7"	""	"203.6"	""	"253.2"	"219.1"	""	"688"	"45"	"35.000"	"28.000"	"0.00110041991773384"	"28"	"0"	"2.112E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIYIPLPDEK"	"[R].lDQLIYIPLPDEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"1008.09442"	"2015.18157"	"2015.18290"	"-0.66"	"-0.00067"	"12/136"	"12"	"136"	"562937.254333496"	"HCD"	"MS2"	"0"	"29.3"	"100.000"	"83.9947"	"28726"	"28726"	"28709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.1"	""	"37.0"	""	"48.2"	""	"40.6"	""	"51.2"	"52.6"	""	"696"	"45"	"35.000"	"28.000"	"0.00111835386744683"	"25"	"0"	"0.0001734"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIYIPLPDEK"	"[R].lDQLIYIPLPDEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"1008.09448"	"2015.18169"	"2015.18290"	"-0.60"	"-0.00061"	"13/136"	"13"	"136"	"386996.520874023"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"83.6883"	"28601"	"28601"	"28571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.6"	""	"34.9"	""	"30.3"	""	"26.8"	""	"35.3"	"33.9"	""	"696"	"36"	"35.000"	"28.000"	"0.0080090175245816"	"26"	"0.0001308"	"0.0002237"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIYIPLPDEK"	"[R].lDQLIYIPLPDEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"1008.09473"	"2015.18218"	"2015.18290"	"-0.36"	"-0.00036"	"11/136"	"11"	"136"	"358295.707275391"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"83.9674"	"28663"	"28663"	"28644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.3"	""	"29.2"	""	"29.6"	""	"29.5"	""	"33.6"	"32.6"	""	"695"	"49"	"35.000"	"28.000"	"0.000421652625536579"	"28"	"0.0001889"	"0.0005947"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIYIPLPDEK"	"[R].lDQLIYIPLPDEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"672.39899"	"2015.18241"	"2015.18290"	"-0.24"	"-0.00016"	"11/136"	"11"	"136"	"7157505.97949219"	"HCD"	"MS2"	"0.1757391"	"142.6"	"94.286"	"83.8868"	"28630"	"28630"	"28612"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.9"	""	"203.3"	""	"216.7"	""	"213.6"	""	"258.1"	"244.7"	""	"695"	"38"	"35.000"	"28.000"	"0.00570104946186839"	"25"	"0"	"1.779E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIYIPLPDEK"	"[R].lDQLIYIPLPDEk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"1008.09576"	"2015.18425"	"2015.18290"	"0.67"	"0.00068"	"14/136"	"14"	"136"	"365200.836730957"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"83.6544"	"28536"	"28536"	"28508"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.2"	""	"22.6"	""	"28.8"	""	"32.0"	""	"31.0"	"30.2"	""	"672"	"49"	"35.000"	"28.000"	"0.000385779616822953"	""	"0"	"3.075E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPISADSAIMNPASK"	"[R].rPISADSAIMNPASk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"672.71490"	"2016.13016"	"2016.13122"	"-0.52"	"-0.00035"	"12/160"	"12"	"160"	"4523644.48309326"	"HCD"	"MS2"	"9.412862"	"136.1"	"96.509"	"36.1296"	"9189"	"9189"	"9162"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.7"	""	"178.7"	""	"203.9"	""	"188.8"	"3.6"	"254.0"	"273.5"	""	"1159"	"27"	"37.000"	"30.000"	"0.121074710782992"	"17"	"0"	"3.404E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPISADSAIMNPASK"	"[R].rPISADSAIMNPASk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"672.71497"	"2016.13034"	"2016.13122"	"-0.43"	"-0.00029"	"13/160"	"13"	"160"	"4538179.69006348"	"HCD"	"MS2"	"8.414571"	"155.1"	"100.000"	"36.2121"	"9266"	"9266"	"9241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.6"	""	"207.3"	""	"196.3"	""	"222.9"	"6.0"	"289.0"	"315.8"	""	"1157"	"33"	"37.000"	"30.000"	"0.03157209226413"	"15"	"0"	"6.582E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQLIYIPLPDEK"	"[R].lDqLIYIPLPDEk.[S]"	"N-Term(TMT6plex); Q3(Deamidated); K13(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"672.73279"	"2016.18381"	"2016.16692"	"8.38"	"0.00563"	"9/136"	"9"	"136"	"765975.632751465"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"83.5737"	"28503"	"28503"	"28476"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.5"	""	"31.9"	""	"36.2"	""	"38.4"	""	"46.6"	"39.7"	""	"725"	"33"	"35.000"	"28.000"	"0.0196475322770589"	"24"	"0.000523"	"0.003032"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFFSEIISSISDVK"	"[R].sFFSEIISSISDVk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"3"	"P36876"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1"	"P36876; P36877; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"673.04645"	"2017.12479"	"2017.12578"	"-0.49"	"-0.00033"	"5/126"	"5"	"126"	"120242.26763916"	"HCD"	"MS2"	"13.68647"	"4.0"	"100.000"	"97.4852"	"33463"	"33463"	"33454"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.4"	""	"5.8"	""	"5.6"	""	"8.0"	""	"5.8"	"9.8"	""	"1239"	"9"	"37.000"	"30.000"	"8.12907837442397"	"15"	"0.001058"	"0.01426"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSEAFMPFSTGK"	"[K].kSEAFMPFSTGk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.05090"	"2017.13816"	"2017.13954"	"-0.69"	"-0.00046"	"6/126"	"6"	"126"	"3843574.02624512"	"HCD"	"MS2"	"0"	"180.9"	"100.000"	"44.2150"	"12536"	"12536"	"12508"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"319.2"	""	"274.5"	""	"295.6"	""	"215.2"	""	"283.1"	"324.2"	""	"1149"	"3"	"37.000"	"30.000"	"32.0841126876309"	"13"	"0.001945"	"0.02748"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTLADGGRDESLK"	"[K].aLLTLADGGRDESLk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.06158"	"2017.17020"	"2017.16938"	"0.41"	"0.00027"	"12/140"	"12"	"140"	"10567065.3048096"	"HCD"	"MS2"	"31.89521"	"468.2"	"100.000"	"48.6946"	"14361"	"14361"	"14335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"625.8"	""	"587.5"	""	"601.9"	""	"760.2"	""	"961.9"	"913.4"	""	"817"	"19"	"36.000"	"29.000"	"0.558717225255904"	"14"	"0"	"0.0001476"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTLADGGRDESLK"	"[K].aLLTLADGGRDESLk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.06183"	"2017.17093"	"2017.16938"	"0.77"	"0.00052"	"13/140"	"13"	"140"	"1931504.12493896"	"HCD"	"MS2"	"4.343376"	"129.9"	"100.000"	"48.6935"	"14313"	"14313"	"14287"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.8"	""	"163.0"	""	"162.7"	""	"199.0"	""	"275.7"	"256.5"	""	"802"	"16"	"36.000"	"29.000"	"1.12757223298998"	"13"	"0.0001889"	"0.0003913"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTLADGGRDESLK"	"[K].aLLTLADGGRDESLk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.06201"	"2017.17148"	"2017.16938"	"1.04"	"0.00070"	"12/140"	"12"	"140"	"1545205.54486084"	"HCD"	"MS2"	"3.841007"	"116.7"	"100.000"	"49.0168"	"14493"	"14493"	"14463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"155.1"	""	"132.2"	""	"153.9"	""	"190.9"	""	"245.7"	"231.0"	""	"801"	"17"	"36.000"	"29.000"	"0.744050684264225"	"14"	"0.0001889"	"0.0009201"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLTLADGGRDESLK"	"[K].aLLTLADGGRDESLk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.06274"	"2017.17368"	"2017.16938"	"2.13"	"0.00143"	"17/140"	"17"	"140"	"8517358.73120117"	"HCD"	"MS2"	"35.28382"	"388.9"	"100.000"	"48.3855"	"14187"	"14187"	"14160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"528.9"	""	"507.4"	""	"484.9"	""	"639.3"	""	"772.2"	"761.2"	""	"760"	"20"	"35.000"	"28.000"	"0.39064619328806"	"14"	"0.0001889"	"0.0004014"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLASLGLSLVASGGTAK"	"[R].nLASLGLSLVASGGTAk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"673.07294"	"2017.20426"	"2017.20576"	"-0.75"	"-0.00050"	"18/182"	"18"	"182"	"1333429.66381836"	"HCD"	"MS2"	"2.351846"	"47.3"	"100.000"	"74.2919"	"24727"	"24727"	"24705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.8"	""	"60.0"	""	"70.4"	""	"72.4"	"0.4"	"79.8"	"108.6"	""	"475"	"63"	"33.000"	"26.000"	"1.12632471499308E-05"	"22"	"0"	"2.013E-06"	"1.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLASLGLSLVASGGTAK"	"[R].nLASLGLSLVASGGTAk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.8902"	"0.0000"	"1"	"1"	"1"	"673.07318"	"2017.20499"	"2017.20576"	"-0.38"	"-0.00026"	"19/182"	"19"	"182"	"1999813.00091553"	"HCD"	"MS2"	"9.633139"	"57.2"	"100.000"	"74.2017"	"24742"	"24742"	"24719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.9"	""	"76.1"	""	"89.0"	""	"94.1"	"0.8"	"93.8"	"109.1"	""	"468"	"82"	"33.000"	"26.000"	"1.58203416241724E-07"	""	"0"	"1.024E-06"	"1.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].tkDVLTITLTPk.[V]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.10046"	"2017.28684"	"2017.28759"	"-0.37"	"-0.00025"	"8/126"	"8"	"126"	"6371708.95251465"	"HCD"	"MS2"	"15.00214"	"229.6"	"100.000"	"50.9379"	"15221"	"15221"	"15202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.2"	""	"385.2"	""	"364.3"	""	"341.0"	""	"364.9"	"398.7"	""	"177"	"51"	"29.000"	"22.000"	"7.04601025119327E-05"	"16"	"0"	"2.213E-06"	"1.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].tkDVLTITLTPk.[V]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.10065"	"2017.28739"	"2017.28759"	"-0.10"	"-0.00007"	"8/126"	"8"	"126"	"63947506.4350586"	"HCD"	"MS2"	"5.920181"	"259.7"	"13.726"	"50.9362"	"15271"	"15271"	"15254"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"390.5"	""	"435.2"	""	"471.6"	""	"376.5"	""	"372.4"	"408.2"	""	"177"	"51"	"29.000"	"22.000"	"6.8539869105523E-05"	"16"	"0"	"1.355E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].tkDVLTITLTPk.[V]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.10077"	"2017.28775"	"2017.28759"	"0.08"	"0.00005"	"8/126"	"8"	"126"	"11989206.2712402"	"HCD"	"MS2"	"0"	"444.5"	"100.000"	"50.6447"	"15151"	"15151"	"15132"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"675.7"	""	"742.1"	""	"742.9"	""	"689.2"	""	"637.0"	"713.9"	""	"177"	"27"	"29.000"	"22.000"	"0.0171768400166961"	"14"	"0"	"3.019E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].tkDVLTITLTPk.[V]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1009.14752"	"2017.28777"	"2017.28759"	"0.09"	"0.00009"	"7/126"	"7"	"126"	"105435.721069336"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"50.7242"	"15134"	"15134"	"15106"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.8"	""	"13.4"	""	"20.3"	""	"14.4"	""	"13.4"	"17.4"	""	"177"	"22"	"29.000"	"22.000"	"0.0555831647549787"	"14"	"0.002393"	"0.03529"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDVLTITLTPK"	"[K].tkDVLTITLTPk.[V]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.10101"	"2017.28849"	"2017.28759"	"0.44"	"0.00030"	"8/126"	"8"	"126"	"43832951.4205322"	"HCD"	"MS2"	"4.70806"	"506.0"	"35.857"	"50.5062"	"15044"	"15044"	"15026"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"791.5"	""	"890.4"	""	"875.3"	""	"757.7"	"5.7"	"663.6"	"789.8"	""	"177"	"49"	"29.000"	"22.000"	"0.000105424917710423"	"16"	"0"	"6.442E-06"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEWAVVTGGTDGIGK"	"[R].lGEWAVVTGGTDGIGk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"673.38159"	"2018.13022"	"2018.13226"	"-1.01"	"-0.00068"	"9/138"	"9"	"138"	"3277487.15985107"	"HCD"	"MS2"	"20.15805"	"99.8"	"100.000"	"65.2970"	"21116"	"21116"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.4"	""	"148.3"	""	"139.3"	""	"172.4"	"1.1"	"180.5"	"178.9"	""	"1229"	"55"	"37.000"	"30.000"	"0.000183451761932509"	"23"	"0"	"2.085E-06"	"1.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEWAVVTGGTDGIGK"	"[R].lGEWAVVTGGTDGIGk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1009.56915"	"2018.13103"	"2018.13226"	"-0.61"	"-0.00062"	"11/138"	"11"	"138"	"128490.460144043"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"65.5307"	"21159"	"21159"	"21129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.0"	""	"14.7"	""	"13.8"	""	"13.5"	""	"14.8"	"16.8"	""	"1213"	"31"	"37.000"	"30.000"	"0.0443435854132693"	"14"	"0.0001308"	"0.0002114"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEWAVVTGGTDGIGK"	"[R].lGEWAVVTGGTDGIGk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"673.38220"	"2018.13205"	"2018.13226"	"-0.10"	"-0.00007"	"17/138"	"17"	"138"	"2590870.91644287"	"HCD"	"MS2"	"19.15343"	"81.9"	"100.000"	"65.4063"	"21108"	"21108"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.4"	""	"106.5"	""	"123.2"	""	"143.0"	"0.8"	"154.2"	"150.5"	""	"1194"	"39"	"37.000"	"30.000"	"0.00722727085729638"	"17"	"0"	"5.483E-06"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEWAVVTGGTDGIGK"	"[R].lGEWAVVTGGTDGIGk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"1009.57031"	"2018.13335"	"2018.13226"	"0.54"	"0.00054"	"11/138"	"11"	"138"	"218386.03515625"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"65.3890"	"21154"	"21154"	"21123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.9"	""	"25.3"	""	"22.4"	""	"25.5"	""	"28.3"	"34.0"	""	"1196"	"38"	"37.000"	"30.000"	"0.00866365568419767"	"16"	"0"	"0.0001036"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPLVPDLQDVAQLR"	"[R].lLVPLVPDLQDVAQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"673.41077"	"2018.21775"	"2018.22113"	"-1.68"	"-0.00113"	"12/138"	"12"	"138"	"186103.778442383"	"HCD"	"MS2"	"8.606804"	"4.2"	"100.000"	"91.9792"	"31757"	"31757"	"31750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.5"	""	"4.0"	""	"5.5"	""	"7.4"	""	"9.0"	"10.0"	""	"512"	"39"	"34.000"	"27.000"	"0.00360777932396"	"16"	"0"	"0.000139"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPLVPDLQDVAQLR"	"[R].lLVPLVPDLQDVAQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"1009.61261"	"2018.21794"	"2018.22113"	"-1.58"	"-0.00159"	"5/138"	"5"	"138"	"59691.3095703125"	"HCD"	"MS2"	"0"	"0.8"	"100.000"	"92.0095"	"31768"	"31768"	"31760"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"3.1"	""	""	""	""	""	""	"5.0"	""	"512"	"8"	"34.000"	"27.000"	"3.81276435893994"	"14"	"0.001587"	"0.02118"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPLVPDLQDVAQLR"	"[R].lLVPLVPDLQDVAQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.41132"	"2018.21939"	"2018.22113"	"-0.86"	"-0.00058"	"12/138"	"12"	"138"	"227603.121704102"	"HCD"	"MS2"	"8.686515"	"4.4"	"100.000"	"92.5162"	"31939"	"31939"	"31930"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"2.3"	""	"7.9"	""	"7.4"	""	"9.7"	"7.6"	""	"486"	"35"	"33.000"	"26.000"	"0.00858235102594455"	"15"	"0.0001859"	"0.0003443"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPLVPDLQDVAQLR"	"[R].lLVPLVPDLQDVAQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9804"	"0.0000"	"1"	"1"	"1"	"673.41132"	"2018.21939"	"2018.22113"	"-0.86"	"-0.00058"	"16/138"	"16"	"138"	"1658387.04467773"	"HCD"	"MS2"	"0.7172114"	"8.4"	"100.000"	"92.2471"	"31850"	"31850"	"31843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.7"	""	"12.0"	""	"14.6"	""	"12.3"	""	"14.6"	"17.2"	""	"486"	"51"	"33.000"	"26.000"	"0.000176443747656743"	"16"	"0"	"1.403E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPLVPDLQDVAQLR"	"[R].lLVPLVPDLQDVAQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"1009.61371"	"2018.22014"	"2018.22113"	"-0.49"	"-0.00049"	"9/138"	"9"	"138"	"209234.734191895"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"92.2754"	"31860"	"31860"	"31854"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"4.1"	""	"4.6"	""	"8.6"	""	"6.9"	"11.7"	""	"480"	"35"	"33.000"	"26.000"	"0.00685821730409987"	"18"	"0.0003839"	"0.001676"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPLVPDLQDVAQLR"	"[R].lLVPLVPDLQDVAQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"1009.61395"	"2018.22063"	"2018.22113"	"-0.25"	"-0.00025"	"6/138"	"6"	"138"	"98726.419921875"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"91.8721"	"31696"	"31696"	"31688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"4.2"	""	"4.6"	""	"6.3"	""	"6.8"	"5.5"	""	"466"	"7"	"33.000"	"26.000"	"4.5326889901808"	"17"	"0.00103"	"0.0117"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPLVPDLQDVAQLR"	"[R].lLVPLVPDLQDVAQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"673.41174"	"2018.22068"	"2018.22113"	"-0.22"	"-0.00015"	"13/138"	"13"	"138"	"209666.008300781"	"HCD"	"MS2"	"28.18287"	"4.3"	"100.000"	"91.8348"	"31682"	"31682"	"31673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.7"	""	"3.7"	""	"9.2"	""	"6.1"	""	"8.1"	"7.1"	""	"466"	"39"	"33.000"	"26.000"	"0.00322370966300425"	"16"	"0"	"6.634E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPLVPDLQDVAQLR"	"[R].lLVPLVPDLQDVAQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.41180"	"2018.22086"	"2018.22113"	"-0.13"	"-0.00009"	"14/138"	"14"	"138"	"194541.595092773"	"HCD"	"MS2"	"12.41747"	"3.9"	"100.000"	"92.3655"	"31864"	"31864"	"31859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"4.7"	""	"8.2"	""	"3.0"	""	"5.5"	"8.3"	""	"466"	"44"	"33.000"	"26.000"	"0.000978038432699046"	"16"	"0"	"9.872E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPLVPDLQDVAQLR"	"[R].lLVPLVPDLQDVAQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9608"	"0.0000"	"1"	"1"	"1"	"673.41199"	"2018.22141"	"2018.22113"	"0.14"	"0.00009"	"16/138"	"16"	"138"	"1896801.55096436"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"92.0974"	"31775"	"31775"	"31769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"12.0"	""	"12.4"	""	"16.8"	""	"18.9"	"18.5"	""	"471"	"51"	"33.000"	"26.000"	"0.000176193917370377"	"18"	"0"	"2.213E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVPLVPDLQDVAQLR"	"[R].lLVPLVPDLQDVAQLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"1009.61462"	"2018.22197"	"2018.22113"	"0.42"	"0.00042"	"11/138"	"11"	"138"	"293365.280944824"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"92.1349"	"31789"	"31789"	"31780"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.4"	""	"8.9"	""	"9.2"	""	"14.5"	""	"12.0"	"10.8"	""	"469"	"23"	"33.000"	"26.000"	"0.121658609128841"	"16"	"0.000523"	"0.002944"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSR"	"[K].lGLDFPNLPYLIDGSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.70795"	"2019.10929"	"2019.11124"	"-0.97"	"-0.00065"	"12/160"	"12"	"160"	"670229.582580566"	"HCD"	"MS2"	"3.066159"	"10.2"	"100.000"	"90.0151"	"31076"	"31076"	"31065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.3"	""	"9.2"	""	"15.0"	""	"16.6"	""	"25.2"	"18.1"	""	"1198"	"36"	"37.000"	"30.000"	"0.0137539304021931"	"15"	"0"	"0.0001373"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSR"	"[K].lGLDFPNLPYLIDGSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1010.05847"	"2019.10967"	"2019.11124"	"-0.78"	"-0.00079"	"12/160"	"12"	"160"	"305073.588439941"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"90.2088"	"31149"	"31149"	"31141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.2"	""	"25.0"	""	"25.6"	""	"25.0"	""	"24.3"	"23.4"	""	"1201"	"32"	"37.000"	"30.000"	"0.0353600615041031"	"15"	"0.0001889"	"0.0005954"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSR"	"[K].lGLDFPNLPYLIDGSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"1010.05890"	"2019.11052"	"2019.11124"	"-0.36"	"-0.00036"	"5/160"	"5"	"160"	"109206.076293945"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"89.9479"	"31050"	"31050"	"31040"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"8.3"	""	"10.9"	""	"7.5"	""	"11.8"	"9.0"	""	"1188"	"14"	"37.000"	"30.000"	"2.49336836490659"	"15"	"0.00103"	"0.01205"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSR"	"[K].lGLDFPNLPYLIDGSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.70837"	"2019.11057"	"2019.11124"	"-0.33"	"-0.00022"	"14/160"	"14"	"160"	"618887.495605469"	"HCD"	"MS2"	"5.83094"	"9.4"	"100.000"	"89.8653"	"30985"	"30985"	"30973"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.3"	""	"12.8"	""	"9.5"	""	"18.5"	""	"15.3"	"17.4"	""	"1188"	"43"	"37.000"	"30.000"	"0.00327179771664809"	"15"	"0"	"6.262E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSR"	"[K].lGLDFPNLPYLIDGSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.70844"	"2019.11075"	"2019.11124"	"-0.24"	"-0.00016"	"13/160"	"13"	"160"	"605148.771972656"	"HCD"	"MS2"	"1.283356"	"11.1"	"100.000"	"90.1355"	"31088"	"31088"	"31083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.0"	""	"12.0"	""	"17.6"	""	"21.1"	""	"19.0"	"22.7"	""	"1190"	"37"	"37.000"	"30.000"	"0.0126333045489013"	"15"	"0"	"0.0001266"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSR"	"[K].lGLDFPNLPYLIDGSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1010.05927"	"2019.11125"	"2019.11124"	"0.01"	"0.00001"	"14/160"	"14"	"160"	"459604.984619141"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"90.0842"	"31069"	"31069"	"31064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.1"	""	"35.3"	""	"39.1"	""	"34.0"	""	"37.6"	"41.6"	""	"1180"	"33"	"37.000"	"30.000"	"0.0311065618239465"	"15"	"0.0001859"	"0.0003422"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSR"	"[K].lGLDFPNLPYLIDGSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"1010.05939"	"2019.11150"	"2019.11124"	"0.13"	"0.00013"	"5/160"	"5"	"160"	"119123.006164551"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"89.8210"	"30968"	"30968"	"30957"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.6"	""	"10.9"	""	"12.7"	""	"10.9"	""	"13.0"	"13.1"	""	"1181"	"13"	"37.000"	"30.000"	"2.78112111237401"	"15"	"0.0002723"	"0.001388"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSR"	"[K].lGLDFPNLPYLIDGSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1010.05939"	"2019.11150"	"2019.11124"	"0.13"	"0.00013"	"10/160"	"10"	"160"	"154492.079528809"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"89.8164"	"30966"	"30966"	"30957"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.6"	""	"10.9"	""	"12.7"	""	"10.9"	""	"13.0"	"13.1"	""	"1181"	"21"	"37.000"	"30.000"	"0.514303999869066"	"14"	"0.0001889"	"0.0006398"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIQESVWDEAMK"	"[R].lLIQESVWDEAMk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"674.04498"	"2020.12040"	"2020.11892"	"0.73"	"0.00049"	"10/124"	"10"	"124"	"1172024.8248291"	"HCD"	"MS2"	"16.69518"	"37.3"	"100.000"	"74.6514"	"24926"	"24926"	"24895"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.8"	""	"37.8"	""	"47.7"	""	"60.5"	"0.1"	"83.3"	"78.9"	""	"1113"	"19"	"37.000"	"30.000"	"0.672148399236923"	"17"	"0"	"0.0001353"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPDTIEVQQMK"	"[R].kPDTIEVQQmk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"674.06110"	"2020.16874"	"2020.17157"	"-1.40"	"-0.00095"	"6/106"	"6"	"106"	"511970.248352051"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"32.4348"	"7686"	"7686"	"7656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.9"	""	"42.2"	""	"43.2"	""	"52.2"	"0.4"	"68.1"	"62.9"	""	"851"	"26"	"36.000"	"29.000"	"0.100438348821834"	"15"	"0.0001889"	"0.0008998"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSLQPPGMTPVSQAPR"	"[R].lLSLQPPGMTPVSQAPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"674.38354"	"2021.13608"	"2021.14150"	"-2.68"	"-0.00181"	"12/172"	"12"	"172"	"2138537.31738281"	"HCD"	"MS2"	"9.851637"	"63.5"	"100.000"	"61.3114"	"19489"	"19489"	"19459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.2"	""	"92.3"	""	"90.8"	""	"95.1"	""	"114.9"	"115.1"	""	"1094"	"35"	"37.000"	"30.000"	"0.0168262495766317"	"25"	"0"	"3.119E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSLQPPGMTPVSQAPR"	"[R].lLSLQPPGMTPVSQAPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"674.38544"	"2021.14176"	"2021.14150"	"0.13"	"0.00009"	"16/172"	"16"	"172"	"2176111.83447266"	"HCD"	"MS2"	"21.10626"	"64.7"	"100.000"	"61.1710"	"19378"	"19378"	"19353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.3"	""	"93.4"	""	"88.4"	""	"93.2"	"1.4"	"121.0"	"121.1"	""	"1079"	"36"	"37.000"	"30.000"	"0.0144208695747386"	"26"	"0"	"2.835E-05"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFTVWDVGGQDK"	"[K].nISFTVWDVGGQDk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"3"	"P84079"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"675.36578"	"2024.08280"	"2024.08531"	"-1.24"	"-0.00084"	"11/150"	"11"	"150"	"2835562.55859375"	"HCD"	"MS2"	"0"	"84.1"	"100.000"	"65.9018"	"21310"	"21310"	"21289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.4"	""	"129.0"	""	"128.0"	""	"140.3"	""	"155.7"	"136.7"	""	"1281"	"39"	"38.000"	"31.000"	"0.0081567872339117"	"20"	"0"	"2.112E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFTVWDVGGQDK"	"[K].nISFTVWDVGGQDk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"3"	"P84079"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.36633"	"2024.08445"	"2024.08531"	"-0.43"	"-0.00029"	"14/150"	"14"	"150"	"4058449.57885742"	"HCD"	"MS2"	"0"	"113.7"	"100.000"	"65.8340"	"21335"	"21335"	"21315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.3"	""	"174.2"	""	"164.4"	""	"212.9"	"0.6"	"191.4"	"172.5"	""	"1274"	"53"	"38.000"	"31.000"	"0.000338173390975139"	"16"	"0"	"1.135E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFTVWDVGGQDK"	"[K].nISFTVWDVGGQDk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"3"	"P84079"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"1012.54602"	"2024.08476"	"2024.08531"	"-0.27"	"-0.00027"	"15/150"	"15"	"150"	"690429.501708984"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"65.9258"	"21373"	"21373"	"21347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.3"	""	"78.3"	""	"90.0"	""	"93.7"	""	"95.1"	"83.8"	""	"1288"	"43"	"38.000"	"31.000"	"0.00293687773872635"	"16"	"0"	"4.51E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFTVWDVGGQDK"	"[K].nISFTVWDVGGQDk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"3"	"P84079"	"ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.9672"	"0.0000"	"1"	"1"	"1"	"1012.54761"	"2024.08794"	"2024.08531"	"1.30"	"0.00131"	"15/150"	"15"	"150"	"435833.248718262"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"65.9524"	"21331"	"21331"	"21305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.3"	""	"62.4"	""	"59.9"	""	"67.0"	"0.9"	"65.6"	"63.3"	""	"1268"	"61"	"38.000"	"31.000"	"5.28553871048848E-05"	"18"	"0"	"1.65E-05"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILIRPLYSNPPLNGAR"	"[K].iLIRPLYSnPPLNGAR.[I]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"3"	"3"	"0.3000"	"0.0000"	"1"	"1"	"1"	"675.40021"	"2024.18607"	"2024.18541"	"0.33"	"0.00022"	"14/144"	"14"	"144"	"4066706.55853271"	"HCD"	"MS2"	"43.01852"	"190.6"	"100.000"	"52.1995"	"15787"	"15787"	"15766"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"309.3"	""	"274.0"	""	"284.1"	""	"262.3"	"1.4"	"344.5"	"328.8"	""	"685"	"10"	"35.000"	"28.000"	"3.57816675083124"	"15"	"0.0001859"	"0.000345"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SKTKEQILEEFSK"	"[K].sKTKEQILEEFSk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"2"	"3"	"3"	"0.4615"	"0.0000"	"1"	"2"	"2"	"675.73431"	"2025.18839"	"2025.16323"	"12.42"	"0.00839"	"7/140"	"7"	"140"	"2347475.90441895"	"HCD"	"MS2"	"63.41083"	"136.8"	"100.000"	"50.9246"	"15266"	"15266"	"15238"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.5"	""	"128.9"	""	"130.0"	""	"273.7"	""	"297.0"	"276.7"	""	"626"	"13"	"34.000"	"27.000"	"1.73597848155826"	"13"	"0.006845"	"0.2552"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLPTPVVSWLISK"	"[R].nLLPTPVVSWLISk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.75476"	"2025.24973"	"2025.25125"	"-0.75"	"-0.00051"	"9/146"	"9"	"146"	"238147.349060059"	"HCD"	"MS2"	"22.30219"	"7.4"	"100.000"	"93.0797"	"32122"	"32122"	"32110"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"7.3"	""	"14.6"	""	"12.1"	""	"14.7"	"12.4"	""	"277"	"28"	"31.000"	"24.000"	"0.0227221683588136"	"14"	"0.0002277"	"0.001249"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLPTPVVSWLISK"	"[R].nLLPTPVVSWLISk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"1013.12854"	"2025.24980"	"2025.25125"	"-0.72"	"-0.00073"	"6/146"	"6"	"146"	"60908.9288330078"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"92.9529"	"32056"	"32056"	"32047"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"4.7"	""	"6.8"	""	"2.6"	"3.5"	""	"277"	"11"	"31.000"	"24.000"	"1.01029865170258"	"18"	"0.000523"	"0.003216"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLPTPVVSWLISK"	"[R].nLLPTPVVSWLISk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"1013.12860"	"2025.24993"	"2025.25125"	"-0.66"	"-0.00066"	"5/146"	"5"	"146"	"56913.5681762695"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"93.1080"	"32132"	"32132"	"32124"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.7"	""	"4.0"	""	"3.7"	""	"5.8"	""	"4.9"	"4.0"	""	"277"	"6"	"31.000"	"24.000"	"3.39195258995497"	"17"	"0.001058"	"0.01453"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLPTPVVSWLISK"	"[R].nLLPTPVVSWLISk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.75488"	"2025.25010"	"2025.25125"	"-0.57"	"-0.00039"	"13/146"	"13"	"146"	"500357.588500977"	"HCD"	"MS2"	"29.91409"	"11.8"	"100.000"	"93.3410"	"32208"	"32208"	"32204"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.3"	""	"14.3"	""	"26.1"	""	"20.6"	""	"22.0"	"19.6"	""	"277"	"55"	"31.000"	"24.000"	"3.99438363183035E-05"	"16"	"0"	"7.846E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLLPTPVVSWLISK"	"[R].nLLPTPVVSWLISk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"1013.12891"	"2025.25054"	"2025.25125"	"-0.35"	"-0.00036"	"3/146"	"3"	"146"	"49891.8673706055"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"93.3740"	"32219"	"32219"	"32211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.6"	""	"3.1"	""	"2.7"	""	"3.0"	"5.5"	""	"271"	"3"	"31.000"	"24.000"	"6.20782256498193"	"13"	"0.001999"	"0.03119"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLLPTPVVSWLISK"	"[R].nLLPTPVVSWLISk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"1013.12909"	"2025.25090"	"2025.25125"	"-0.17"	"-0.00018"	"3/146"	"3"	"146"	"69079.5713500977"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"93.2136"	"32138"	"32138"	"32133"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.9"	""	"2.1"	""	"3.9"	""	"5.3"	""	"6.7"	"7.2"	""	"272"	"6"	"31.000"	"24.000"	"3.36154483722194"	"15"	"0.003045"	"0.0588"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLPTPVVSWLISK"	"[R].nLLPTPVVSWLISk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.75543"	"2025.25174"	"2025.25125"	"0.24"	"0.00016"	"15/146"	"15"	"146"	"595818.260437012"	"HCD"	"MS2"	"24.37464"	"14.6"	"100.000"	"93.1714"	"32124"	"32124"	"32118"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.2"	""	"22.2"	""	"24.3"	""	"28.3"	""	"26.1"	"23.1"	""	"256"	"46"	"31.000"	"24.000"	"0.000317841037477833"	"15"	"0"	"6.032E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLPTPVVSWLISK"	"[R].nLLPTPVVSWLISk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.75555"	"2025.25211"	"2025.25125"	"0.42"	"0.00028"	"10/146"	"10"	"146"	"246294.440612793"	"HCD"	"MS2"	"18.81612"	"8.5"	"100.000"	"92.9140"	"32042"	"32042"	"32035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.3"	""	"12.0"	""	"11.8"	""	"18.2"	""	"14.9"	"14.6"	""	"256"	"31"	"31.000"	"24.000"	"0.00982222706383129"	"14"	"0.0001889"	"0.001053"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSGIIPMEFVNK"	"[K].aFDSGIIPMEFVNk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.04010"	"2026.10575"	"2026.10836"	"-1.29"	"-0.00087"	"15/120"	"15"	"120"	"4026826.30487061"	"HCD"	"MS2"	"15.76996"	"103.0"	"100.000"	"75.6041"	"25314"	"25314"	"25295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.8"	""	"139.0"	""	"128.4"	""	"120.5"	""	"194.8"	"220.5"	""	"1159"	"46"	"37.000"	"30.000"	"0.00154189017215341"	"16"	"0"	"0.0001067"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSGIIPMEFVNK"	"[K].aFDSGIIPMEFVNk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"1013.55682"	"2026.10637"	"2026.10836"	"-0.98"	"-0.00099"	"13/120"	"13"	"120"	"494367.67767334"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"75.6579"	"25284"	"25284"	"25265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.6"	""	"48.1"	""	"46.9"	""	"38.5"	""	"69.9"	"87.0"	""	"1147"	"37"	"37.000"	"30.000"	"0.0113640574929922"	"16"	"0"	"0.0001122"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSGIIPMEFVNK"	"[K].aFDSGIIPMEFVNk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"1013.55695"	"2026.10661"	"2026.10836"	"-0.86"	"-0.00087"	"12/120"	"12"	"120"	"467433.688293457"	"HCD"	"MS2"	"0"	"36.5"	"100.000"	"75.6158"	"25319"	"25319"	"25295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.6"	""	"44.9"	""	"41.8"	""	"35.9"	""	"66.6"	"87.9"	""	"1147"	"37"	"37.000"	"30.000"	"0.0127800755810652"	"15"	"0"	"0.0001679"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSGIIPMEFVNK"	"[K].aFDSGIIPMEFVNk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.04059"	"2026.10721"	"2026.10836"	"-0.56"	"-0.00038"	"13/120"	"13"	"120"	"1337608.24267578"	"HCD"	"MS2"	"2.65545"	"54.0"	"100.000"	"75.9327"	"25396"	"25396"	"25377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.7"	""	"58.2"	""	"70.9"	""	"74.2"	""	"117.7"	"107.3"	""	"1140"	"38"	"37.000"	"30.000"	"0.00920184377391097"	"15"	"0"	"0.0001834"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSGIIPMEFVNK"	"[K].aFDSGIIPMEFVNk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.04102"	"2026.10849"	"2026.10836"	"0.07"	"0.00005"	"12/120"	"12"	"120"	"1130750.65539551"	"HCD"	"MS2"	"6.194629"	"45.0"	"100.000"	"75.9157"	"25441"	"25441"	"25423"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.4"	""	"56.1"	""	"58.8"	""	"62.1"	""	"100.3"	"85.4"	""	"1130"	"28"	"37.000"	"30.000"	"0.0957300857252742"	"14"	"0"	"9.311E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSGIIPMEFVNK"	"[K].aFDSGIIPMEFVNk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.04108"	"2026.10868"	"2026.10836"	"0.16"	"0.00011"	"15/120"	"15"	"120"	"3648492.12689209"	"HCD"	"MS2"	"16.36218"	"97.6"	"100.000"	"75.6281"	"25272"	"25272"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.1"	""	"115.0"	""	"134.7"	""	"103.3"	""	"180.6"	"215.4"	""	"1130"	"45"	"37.000"	"30.000"	"0.0019277399506639"	"16"	"0"	"8.402E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVSGMGVIVHIIEK"	"[R].dAVSGMGVIVHIIEk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"676.06317"	"2026.17496"	"2026.17710"	"-1.06"	"-0.00071"	"15/138"	"15"	"138"	"4497092.1998291"	"HCD"	"MS2"	"42.48128"	"130.8"	"100.000"	"68.9705"	"22606"	"22606"	"22586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.0"	""	"166.6"	""	"189.9"	""	"207.5"	""	"244.0"	"259.6"	""	"737"	"31"	"35.000"	"28.000"	"0.0296781955581856"	"18"	"0"	"1.174E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVSGMGVIVHIIEK"	"[R].dAVSGMGVIVHIIEk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"676.06494"	"2026.18027"	"2026.17710"	"1.56"	"0.00106"	"11/138"	"11"	"138"	"4115254.35791016"	"HCD"	"MS2"	"42.17866"	"112.1"	"100.000"	"69.1377"	"22623"	"22623"	"22602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.0"	""	"144.9"	""	"156.6"	""	"173.8"	""	"220.0"	"228.5"	""	"704"	"33"	"35.000"	"28.000"	"0.0196581508547364"	"17"	"0"	"1.829E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALDGTPGMIGYGMAK"	"[K].aALDGTPGmIGYGMAk.[G]"	"N-Term(TMT6plex); M9(Oxidation); K16(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"1014.03894"	"2027.07060"	"2027.07059"	"0.01"	"0.00001"	"13/124"	"13"	"124"	"417009.05279541"	"HCD"	"MS2"	"0"	"25.9"	"100.000"	"48.4328"	"14254"	"14254"	"14226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.5"	""	"44.8"	""	"46.3"	""	"19.4"	"1.4"	"40.8"	"41.0"	""	"1198"	"10"	"37.000"	"30.000"	"6.10136241444416"	"15"	"0.0003839"	"0.001593"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASQANIAQVLAELK"	"[R].lASQANIAQVLAELk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"676.41211"	"2027.22177"	"2027.22650"	"-2.33"	"-0.00157"	"16/154"	"16"	"154"	"1111845.52038574"	"HCD"	"MS2"	"5.37466"	"31.2"	"100.000"	"83.3520"	"28463"	"28463"	"28445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.4"	""	"35.2"	""	"43.9"	""	"49.6"	""	"61.4"	"66.3"	""	"454"	"44"	"33.000"	"26.000"	"0.000845329173197871"	"20"	"0"	"2.042E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASQANIAQVLAELK"	"[R].lASQANIAQVLAELk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.41266"	"2027.22342"	"2027.22650"	"-1.52"	"-0.00102"	"17/154"	"17"	"154"	"1363231.79376221"	"HCD"	"MS2"	"3.387584"	"35.6"	"100.000"	"83.3250"	"28401"	"28401"	"28382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.2"	""	"45.0"	""	"42.2"	""	"67.6"	"0.2"	"69.6"	"67.1"	""	"448"	"42"	"33.000"	"26.000"	"0.00128306310940826"	"15"	"0"	"7.828E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASQANIAQVLAELK"	"[R].lASQANIAQVLAELk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1014.11554"	"2027.22380"	"2027.22650"	"-1.33"	"-0.00135"	"7/154"	"7"	"154"	"80857.6950683594"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"83.4832"	"28517"	"28517"	"28491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.5"	""	"4.6"	""	"5.5"	""	"9.1"	""	"16.1"	"14.0"	""	"452"	"20"	"33.000"	"26.000"	"0.215828324440845"	"14"	"0.0006037"	"0.004021"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASQANIAQVLAELK"	"[R].lASQANIAQVLAELk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"676.41284"	"2027.22397"	"2027.22650"	"-1.25"	"-0.00084"	"14/154"	"14"	"154"	"1398336.31494141"	"HCD"	"MS2"	"50.12706"	"41.4"	"100.000"	"83.6314"	"28526"	"28526"	"28508"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.0"	""	"59.6"	""	"51.9"	""	"61.3"	""	"92.0"	"83.6"	""	"452"	"17"	"33.000"	"26.000"	"0.478749616566162"	"20"	"0"	"2.074E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLGTLFPPAEALK"	"[R].aLQLGTLFPPAEALk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.41388"	"2027.22708"	"2027.23052"	"-1.69"	"-0.00114"	"14/148"	"14"	"148"	"9657156.59667969"	"HCD"	"MS2"	"3.476085"	"53.0"	"47.880"	"79.6770"	"26914"	"26914"	"26897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.4"	""	"60.6"	""	"76.1"	""	"89.3"	"0.1"	"99.8"	"108.7"	""	"433"	"47"	"33.000"	"26.000"	"0.00048245620981702"	"15"	"0"	"1.546E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASQANIAQVLAELK"	"[R].lASQANIAQVLAELk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1;AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"1014.11761"	"2027.22795"	"2027.22650"	"0.72"	"0.00073"	"11/154"	"11"	"154"	"90936.4315795898"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"83.3848"	"28426"	"28426"	"28398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"5.8"	""	"7.6"	""	"14.4"	""	"13.8"	"14.9"	""	"433"	"41"	"33.000"	"26.000"	"0.00160124542050108"	"17"	"0.0001889"	"0.0004362"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLGTLFPPAEALK"	"[R].aLQLGTLFPPAEALk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1014.11768"	"2027.22807"	"2027.23052"	"-1.21"	"-0.00122"	"13/148"	"13"	"148"	"745043.241455078"	"HCD"	"MS2"	"34.56158"	"43.1"	"100.000"	"79.4176"	"26859"	"26859"	"26831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.3"	""	"59.4"	""	"58.5"	""	"72.3"	""	"81.1"	"91.0"	""	"433"	"37"	"33.000"	"26.000"	"0.00441019609823288"	"15"	"0"	"4.379E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLGTLFPPAEALK"	"[R].aLQLGTLFPPAEALk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1014.11786"	"2027.22844"	"2027.23052"	"-1.03"	"-0.00104"	"15/148"	"15"	"148"	"353962.76550293"	"HCD"	"MS2"	"4.304575"	"18.4"	"100.000"	"79.7134"	"26979"	"26979"	"26959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.1"	""	"21.5"	""	"32.2"	""	"26.8"	""	"36.5"	"33.6"	""	"433"	"52"	"33.000"	"26.000"	"0.000138821873330687"	"16"	"0"	"8.837E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLGTLFPPAEALK"	"[R].aLQLGTLFPPAEALk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"676.41437"	"2027.22855"	"2027.23052"	"-0.97"	"-0.00066"	"14/148"	"14"	"148"	"10040007.3669434"	"HCD"	"MS2"	"2.799806"	"68.7"	"64.837"	"79.6255"	"26944"	"26944"	"26927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.1"	""	"82.9"	""	"91.5"	""	"118.1"	""	"136.1"	"138.5"	""	"435"	"50"	"33.000"	"26.000"	"0.000211085917875894"	"17"	"0"	"2.179E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLGTLFPPAEALK"	"[R].aLQLGTLFPPAEALk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.41437"	"2027.22855"	"2027.23052"	"-0.97"	"-0.00066"	"14/148"	"14"	"148"	"3241859.34155273"	"HCD"	"MS2"	"43.10555"	"71.9"	"100.000"	"79.3346"	"26825"	"26825"	"26799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.9"	""	"93.0"	""	"95.1"	""	"118.0"	""	"147.7"	"141.4"	""	"435"	"37"	"33.000"	"26.000"	"0.00447156204626551"	"15"	"0"	"2.162E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLGTLFPPAEALK"	"[R].aLQLGTLFPPAEALk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1014.11816"	"2027.22905"	"2027.23052"	"-0.72"	"-0.00073"	"16/148"	"16"	"148"	"452219.299865723"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"79.7255"	"26933"	"26933"	"26913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.6"	""	"31.6"	""	"35.8"	""	"42.3"	""	"49.3"	"54.6"	""	"438"	"56"	"33.000"	"26.000"	"5.02856553936607E-05"	"16"	"0"	"6.426E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLGTLFPPAEALK"	"[R].aLQLGTLFPPAEALk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.41455"	"2027.22910"	"2027.23052"	"-0.70"	"-0.00047"	"13/148"	"13"	"148"	"3296220.76538086"	"HCD"	"MS2"	"43.50027"	"70.4"	"100.000"	"79.3747"	"26790"	"26790"	"26769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.0"	""	"89.3"	""	"90.4"	""	"119.0"	"0.5"	"138.7"	"134.0"	""	"438"	"41"	"33.000"	"26.000"	"0.00166895303195565"	"15"	"0"	"1.193E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLGTLFPPAEALK"	"[R].aLQLGTLFPPAEALk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.9787"	"0.0000"	"1"	"1"	"1"	"1014.11847"	"2027.22966"	"2027.23052"	"-0.42"	"-0.00043"	"15/148"	"15"	"148"	"567436.761901855"	"HCD"	"MS2"	"43.03541"	"35.6"	"100.000"	"79.4322"	"26814"	"26814"	"26785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.1"	""	"45.2"	""	"52.3"	""	"57.0"	""	"69.6"	"71.4"	""	"438"	"47"	"33.000"	"26.000"	"0.000396683480283693"	"16"	"0"	"3.79E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQLGTLFPPAEALK"	"[R].aLQLGTLFPPAEALk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"676.41516"	"2027.23093"	"2027.23052"	"0.20"	"0.00014"	"14/148"	"14"	"148"	"572980.634521484"	"HCD"	"MS2"	"28.57939"	"23.6"	"100.000"	"80.0071"	"27048"	"27048"	"27025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.0"	""	"29.5"	""	"29.1"	""	"38.1"	"1.5"	"58.5"	"41.3"	""	"415"	"40"	"33.000"	"26.000"	"0.00187076011053236"	"20"	"0"	"2.634E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIGGLSFETTEESLR"	"[K].lFIGGLSFETTEESLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"676.69904"	"2028.08255"	"2028.08509"	"-1.25"	"-0.00084"	"17/134"	"17"	"134"	"955292.363098145"	"HCD"	"MS2"	"10.38535"	"20.6"	"100.000"	"77.5085"	"26080"	"26080"	"26053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.5"	""	"15.1"	""	"22.2"	""	"36.2"	""	"57.7"	"44.9"	""	"1164"	"49"	"37.000"	"30.000"	"0.000727650755586713"	"20"	"0"	"1.433E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIGGLSFETTEESLR"	"[K].lFIGGLSFETTEESLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1014.54517"	"2028.08306"	"2028.08509"	"-1.00"	"-0.00102"	"11/134"	"11"	"134"	"160331.84185791"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"77.5719"	"26055"	"26055"	"26025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"7.2"	""	"6.4"	""	"17.5"	""	"22.3"	"26.2"	""	"1164"	"21"	"37.000"	"30.000"	"0.434433177394659"	"14"	"0.0001889"	"0.0005303"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIGGLSFETTEESLR"	"[K].lFIGGLSFETTEESLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.8730"	"0.0000"	"1"	"1"	"1"	"676.69922"	"2028.08310"	"2028.08509"	"-0.98"	"-0.00066"	"14/134"	"14"	"134"	"1106238.37249756"	"HCD"	"MS2"	"5.699278"	"19.3"	"100.000"	"77.5582"	"26049"	"26049"	"26025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.9"	""	"20.7"	""	"17.8"	""	"37.3"	"0.5"	"51.7"	"37.5"	""	"1168"	"63"	"37.000"	"30.000"	"3.13626569080227E-05"	"25"	"0"	"1.762E-06"	"1.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIGGLSFETTEESLR"	"[K].lFIGGLSFETTEESLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"1014.54584"	"2028.08440"	"2028.08509"	"-0.34"	"-0.00034"	"7/134"	"7"	"134"	"170343.581665039"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"77.5547"	"26099"	"26099"	"26069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"7.4"	""	"4.5"	""	"21.0"	""	"18.4"	"24.0"	""	"1160"	"30"	"37.000"	"30.000"	"0.0540042567771342"	"15"	"0"	"0.0001771"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSPSQIGAFVLMK"	"[K].lYSPSQIGAFVLmk.[M]"	"N-Term(TMT6plex); M13(Oxidation); K14(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.72400"	"2028.15744"	"2028.16039"	"-1.45"	"-0.00098"	"12/124"	"12"	"124"	"956905.411132813"	"HCD"	"MS2"	"34.33387"	"34.5"	"100.000"	"76.3430"	"25610"	"25610"	"25583"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.1"	""	"36.8"	""	"53.5"	""	"59.4"	""	"71.3"	"64.7"	""	"785"	"24"	"35.000"	"28.000"	"0.165897431099249"	"14"	"0.0004166"	"0.002134"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAIYIDPATHLQK"	"[R].vTAIYIDPATHLQk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"676.73553"	"2028.19205"	"2028.18938"	"1.32"	"0.00089"	"16/122"	"16"	"122"	"7334901.2064209"	"HCD"	"MS2"	"13.51018"	"300.7"	"100.000"	"48.6358"	"14289"	"14289"	"14271"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"516.2"	""	"409.3"	""	"476.2"	""	"416.9"	"4.1"	"469.3"	"550.5"	""	"631"	"42"	"34.000"	"28.000"	"0.00217269799496619"	"21"	"0"	"3.737E-06"	"1.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAIYIDPATHLQK"	"[R].vTAIYIDPATHLQk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"676.73572"	"2028.19260"	"2028.18938"	"1.59"	"0.00107"	"15/122"	"15"	"122"	"8645906.42932129"	"HCD"	"MS2"	"14.16876"	"325.6"	"100.000"	"48.9157"	"14451"	"14451"	"14431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"555.3"	""	"452.4"	""	"533.7"	""	"460.0"	""	"503.8"	"573.3"	""	"641"	"52"	"35.000"	"28.000"	"0.000221731826179519"	"23"	"0"	"5.616E-06"	"1.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGPTTGKPLHFK"	"[K].gTGPTTGkPLHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.81030"	"2028.21938"	"2028.22091"	"-0.75"	"-0.00038"	"5/114"	"5"	"114"	"8915065.66870117"	"HCD"	"MS2"	"7.004917"	"309.8"	"84.009"	"32.2603"	"7614"	"7614"	"7592"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"473.5"	""	"427.9"	""	"467.9"	""	"491.5"	"0.3"	"542.9"	"527.7"	""	"446"	"15"	"33.000"	"26.000"	"0.764372163998584"	"13"	"0"	"0.0001115"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGPTTGKPLHFK"	"[K].gTGPTTGkPLHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.81049"	"2028.22011"	"2028.22091"	"-0.39"	"-0.00020"	"10/114"	"10"	"114"	"5687628.80004883"	"HCD"	"MS2"	"7.207905"	"268.7"	"100.000"	"32.4266"	"7725"	"7725"	"7702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"407.0"	""	"371.7"	""	"405.2"	""	"422.3"	"2.5"	"472.3"	"462.2"	""	"440"	"16"	"33.000"	"26.000"	"0.506317199829872"	"14"	"0.0001889"	"0.0008495"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KADGVPLPIGMVK"	"[R].kADGVPLPIGmVk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.75409"	"2028.24771"	"2028.24943"	"-0.85"	"-0.00057"	"16/120"	"16"	"120"	"12458769.5787964"	"HCD"	"MS2"	"2.818578"	"313.7"	"100.000"	"44.6422"	"12709"	"12709"	"12692"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"281.3"	""	"349.8"	""	"387.0"	""	"787.0"	""	"596.5"	"580.3"	""	"303"	"17"	"31.000"	"24.000"	"0.280164195775179"	"14"	"0"	"0.0001824"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KADGVPLPIGMVK"	"[R].kADGVPLPIGmVk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.75427"	"2028.24826"	"2028.24943"	"-0.57"	"-0.00039"	"15/120"	"15"	"120"	"10036775.6845703"	"HCD"	"MS2"	"0"	"273.0"	"100.000"	"44.3027"	"12522"	"12522"	"12502"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.9"	""	"314.5"	""	"316.3"	""	"670.2"	"3.7"	"515.5"	"503.9"	""	"301"	"25"	"31.000"	"24.000"	"0.0499501158616679"	"14"	"0"	"0.0001397"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLKPENLLLASK"	"[R].dLkPENLLLASk.[LSC]"	"N-Term(TMT6plex); K3(TMT6plex); K12(TMT6plex)"	"2"	"4"	"P15791; P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1;Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11275; P15791; P11730; P08413"	"Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Rattus norvegicus OX=10116 GN=Camk2a PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus OX=10116 GN=Camk2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.76080"	"2028.26786"	"2028.26719"	"0.33"	"0.00022"	"11/126"	"11"	"126"	"9433119.92279053"	"HCD"	"MS2"	"30.71153"	"482.2"	"100.000"	"52.3995"	"15819"	"15819"	"15794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"673.7"	""	"535.8"	""	"588.1"	""	"835.0"	""	"985.7"	"971.7"	""	"201"	"19"	"30.000"	"23.000"	"0.114859272646372"	"14"	"0"	"2.81E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLKPENLLLASK"	"[R].dLkPENLLLASk.[LSC]"	"N-Term(TMT6plex); K3(TMT6plex); K12(TMT6plex)"	"2"	"4"	"P15791; P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1;Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11275; P15791; P11730; P08413"	"Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Rattus norvegicus OX=10116 GN=Camk2a PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus OX=10116 GN=Camk2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.76117"	"2028.26896"	"2028.26719"	"0.87"	"0.00059"	"12/126"	"12"	"126"	"8007571.86706543"	"HCD"	"MS2"	"37.93094"	"423.3"	"100.000"	"52.5701"	"15939"	"15939"	"15910"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"619.3"	""	"492.0"	""	"469.3"	""	"709.2"	""	"880.5"	"856.2"	""	"192"	"17"	"29.000"	"22.000"	"0.189789085450739"	"14"	"0"	"7.495E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRPLYDIPYMFEAR"	"[K].lRPLYDIPYmFEAR.[E]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.03015"	"2029.07590"	"2029.07783"	"-0.95"	"-0.00064"	"7/140"	"7"	"140"	"1752752.75683594"	"HCD"	"MS2"	"10.30304"	"77.3"	"100.000"	"59.6136"	"18742"	"18742"	"18713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.2"	""	"104.9"	""	"101.3"	""	"135.0"	"4.2"	"147.9"	"138.8"	""	"1143"	"5"	"37.000"	"30.000"	"19.6343367224778"	"13"	"0.00109"	"0.01475"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHLLHVFDEYKR"	"[R].nHLLHVFDEYkR.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"1"	"5"	"5"	"1.0000"	"0.0000"	"1"	"1"	"1"	"406.63297"	"2029.13572"	"2029.13835"	"-1.30"	"-0.00053"	"9/112"	"9"	"112"	"10051282.0251465"	"HCD"	"MS2"	"2.528958"	"313.6"	"100.000"	"37.5671"	"9779"	"9779"	"9752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"404.2"	""	"470.8"	""	"572.4"	""	"610.7"	"6.0"	"596.2"	"303.8"	""	"949"	"14"	"36.000"	"29.000"	"2.07126762397959"	"13"	"0"	"0.0001344"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHLLHVFDEYKR"	"[R].nHLLHVFDEYkR.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"1"	"5"	"5"	"1.0000"	"0.0000"	"1"	"1"	"1"	"406.63297"	"2029.13572"	"2029.13835"	"-1.30"	"-0.00053"	"10/112"	"10"	"112"	"10801878.9205322"	"HCD"	"MS2"	"0"	"337.0"	"100.000"	"37.6395"	"9852"	"9852"	"9825"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"449.1"	""	"520.5"	""	"595.8"	""	"683.4"	""	"631.0"	"315.4"	""	"949"	"8"	"36.000"	"29.000"	"6.8428373429855"	"13"	"0"	"0.0001746"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDGIPPPYDKK"	"[K].vLDGIPPPYDkk.[K]"	"N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.08276"	"2029.23374"	"2029.23007"	"1.81"	"0.00122"	"11/104"	"11"	"104"	"2399758.17150879"	"HCD"	"MS2"	"61.07918"	"136.2"	"100.000"	"46.4109"	"13427"	"13427"	"13404"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.8"	""	"230.3"	""	"226.5"	""	"189.4"	""	"197.2"	"215.3"	""	"423"	"33"	"33.000"	"26.000"	"0.011436953930299"	"15"	"0.0003839"	"0.001838"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTITPPTAQVVGVLK"	"[K].fTITPPTAQVVGVLk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1015.12476"	"2029.24224"	"2029.24617"	"-1.94"	"-0.00197"	"16/134"	"16"	"134"	"438298.372009277"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"72.1014"	"23885"	"23885"	"23855"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.8"	""	"34.9"	""	"27.5"	""	"34.8"	"0.8"	"33.0"	"37.0"	""	"364"	"64"	"32.000"	"25.000"	"7.71030198210165E-06"	"16"	"0"	"3.497E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTITPPTAQVVGVLK"	"[K].fTITPPTAQVVGVLk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"677.08594"	"2029.24326"	"2029.24617"	"-1.43"	"-0.00097"	"12/134"	"12"	"134"	"4628303.34313965"	"HCD"	"MS2"	"6.169868"	"88.9"	"100.000"	"71.9954"	"23841"	"23841"	"23823"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.9"	""	"137.3"	""	"140.9"	""	"136.4"	"0.7"	"152.9"	"149.5"	""	"364"	"35"	"32.000"	"25.000"	"0.00590298103575815"	"20"	"0"	"0.000171"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTITPPTAQVVGVLK"	"[K].fTITPPTAQVVGVLk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1015.12634"	"2029.24541"	"2029.24617"	"-0.37"	"-0.00038"	"10/134"	"10"	"134"	"458583.090209961"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"72.1467"	"23852"	"23852"	"23825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.1"	""	"38.8"	""	"39.1"	""	"39.5"	""	"43.2"	"46.8"	""	"363"	"62"	"32.000"	"25.000"	"1.13730416438029E-05"	"16"	"0.0001308"	"0.0002826"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTITPPTAQVVGVLK"	"[K].fTITPPTAQVVGVLk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"677.08691"	"2029.24619"	"2029.24617"	"0.01"	"0.00001"	"14/134"	"14"	"134"	"5094947.60345459"	"HCD"	"MS2"	"6.873771"	"117.7"	"100.000"	"72.0868"	"23827"	"23827"	"23809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.9"	""	"177.1"	""	"175.9"	""	"173.9"	""	"206.2"	"198.0"	""	"354"	"37"	"32.000"	"25.000"	"0.00336490855546424"	"16"	"0"	"0.0001611"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTITPPTAQVVGVLK"	"[K].fTITPPTAQVVGVLk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"B2GUZ5"	"F-actin-capping protein subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Capza1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1015.12732"	"2029.24736"	"2029.24617"	"0.59"	"0.00060"	"9/134"	"9"	"134"	"92158.4312133789"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"72.4580"	"23979"	"23979"	"23953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"7.2"	""	"8.2"	""	"8.3"	""	"10.7"	"10.6"	""	"312"	"24"	"31.000"	"24.000"	"0.0566401765441358"	"14"	"0.0001889"	"0.0003885"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCMDLNNTVPEYK"	"[K].vcMDLNNTVPEYk.[E]"	"N-Term(TMT6plex); C2(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"677.34271"	"2030.01358"	"2030.01611"	"-1.25"	"-0.00084"	"10/124"	"10"	"124"	"1567361.96026611"	"HCD"	"MS2"	"31.3383"	"71.4"	"100.000"	"61.4220"	"19534"	"19534"	"19507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.0"	""	"97.5"	""	"97.4"	""	"125.5"	""	"117.5"	"136.9"	""	"942"	"20"	"36.000"	"29.000"	"0.488675883850284"	"14"	"0.0001889"	"0.0004983"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCMDLNNTVPEYK"	"[K].vcMDLNNTVPEYk.[E]"	"N-Term(TMT6plex); C2(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1015.51050"	"2030.01372"	"2030.01611"	"-1.18"	"-0.00120"	"12/124"	"12"	"124"	"446279.561584473"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"61.2539"	"19465"	"19465"	"19443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.2"	""	"63.9"	""	"59.5"	""	"53.9"	""	"58.7"	"44.8"	""	"942"	"50"	"36.000"	"29.000"	"0.000507015115619652"	"16"	"7.476E-05"	"0.0001863"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCMDLNNTVPEYK"	"[K].vcMDLNNTVPEYk.[E]"	"N-Term(TMT6plex); C2(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"677.34302"	"2030.01450"	"2030.01611"	"-0.79"	"-0.00054"	"11/124"	"11"	"124"	"2292321.86749268"	"HCD"	"MS2"	"13.61816"	"95.4"	"100.000"	"61.1962"	"19388"	"19388"	"19369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"149.1"	""	"142.9"	""	"156.8"	""	"144.8"	"1.3"	"146.2"	"160.9"	""	"941"	"38"	"36.000"	"29.000"	"0.00699132719696037"	"18"	"0.0001889"	"0.0004509"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VCMDLNNTVPEYK"	"[K].vcMDLNNTVPEYk.[E]"	"N-Term(TMT6plex); C2(Methylthio); K13(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"1015.51184"	"2030.01641"	"2030.01611"	"0.14"	"0.00015"	"13/124"	"13"	"124"	"399479.305725098"	"HCD"	"MS2"	"0"	"30.5"	"100.000"	"61.0857"	"19343"	"19343"	"19321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.4"	""	"55.8"	""	"51.6"	""	"36.2"	""	"43.2"	"47.5"	""	"954"	"46"	"36.000"	"29.000"	"0.00125175224519438"	"19"	"0"	"6.934E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTPTGMLPSGVLSGGK"	"[K].gLTPTGMLPSGVLSGGk.[Q]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1015.58911"	"2030.17095"	"2030.17202"	"-0.53"	"-0.00054"	"13/150"	"13"	"150"	"182379.199401855"	"HCD"	"MS2"	"22.11689"	"15.6"	"100.000"	"62.9925"	"20175"	"20175"	"20147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.4"	""	"23.2"	""	"15.8"	""	"14.4"	""	"32.7"	"40.6"	""	"777"	"37"	"35.000"	"28.000"	"0.0086375589251807"	"15"	"7.476E-05"	"0.0002038"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTPTGMLPSGVLSGGK"	"[K].gLTPTGMLPSGVLSGGk.[Q]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"1015.59033"	"2030.17339"	"2030.17202"	"0.67"	"0.00068"	"15/150"	"15"	"150"	"294658.719238281"	"HCD"	"MS2"	"36.77035"	"23.9"	"100.000"	"62.8580"	"20067"	"20067"	"20041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.1"	""	"27.6"	""	"24.2"	""	"33.3"	"0.3"	"52.3"	"58.7"	""	"758"	"56"	"35.000"	"28.000"	"9.04980476224095E-05"	"21"	"0"	"0.0001109"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTNEQAIIDVLTK"	"[K].gIGTNEQAIIDVLTk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"1015.59613"	"2030.18498"	"2030.18978"	"-2.36"	"-0.00240"	"6/152"	"6"	"152"	"85778.5919799805"	"HCD"	"MS2"	"19.07668"	"8.4"	"100.000"	"74.2523"	"24763"	"24763"	"24735"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"12.0"	""	"12.2"	""	"13.3"	""	"16.1"	"16.3"	""	"656"	"11"	"35.000"	"28.000"	"2.82405950716549"	"14"	"0.00103"	"0.01269"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTNEQAIIDVLTK"	"[K].gIGTNEQAIIDVLTk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"1015.59619"	"2030.18511"	"2030.18978"	"-2.30"	"-0.00234"	"18/152"	"18"	"152"	"428588.304138184"	"HCD"	"MS2"	"22.92527"	"39.6"	"100.000"	"73.9388"	"24635"	"24635"	"24607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.1"	""	"49.5"	""	"47.1"	""	"66.1"	""	"83.2"	"84.1"	""	"654"	"72"	"35.000"	"28.000"	"1.90347752211075E-06"	"20"	"0"	"3.275E-06"	"1.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTNEQAIIDVLTK"	"[K].gIGTNEQAIIDVLTk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"677.40088"	"2030.18808"	"2030.18978"	"-0.83"	"-0.00056"	"12/152"	"12"	"152"	"1822488.73309326"	"HCD"	"MS2"	"10.16072"	"52.6"	"100.000"	"74.2248"	"24752"	"24752"	"24735"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.5"	""	"66.7"	""	"72.8"	""	"83.8"	""	"107.2"	"112.6"	""	"653"	"48"	"35.000"	"28.000"	"0.000521054541572793"	"19"	"0"	"1.927E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTNEQAIIDVLTK"	"[K].gIGTNEQAIIDVLTk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.8955"	"0.0000"	"1"	"1"	"1"	"677.40131"	"2030.18937"	"2030.18978"	"-0.20"	"-0.00014"	"18/152"	"18"	"152"	"4988965.08605957"	"HCD"	"MS2"	"8.645255"	"109.1"	"100.000"	"73.9156"	"24625"	"24625"	"24607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.2"	""	"133.4"	""	"149.9"	""	"193.9"	"2.5"	"203.6"	"216.5"	""	"639"	"67"	"35.000"	"28.000"	"5.85424457947602E-06"	"24"	"0"	"1.417E-06"	"1.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTNEQAIIDVLTK"	"[K].gIGTNEQAIIDVLTk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.8971"	"0.0000"	"1"	"1"	"1"	"677.40143"	"2030.18973"	"2030.18978"	"-0.02"	"-0.00002"	"18/152"	"18"	"152"	"3613489.30029297"	"HCD"	"MS2"	"17.52219"	"87.3"	"100.000"	"73.8954"	"24565"	"24565"	"24545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.6"	""	"97.8"	""	"116.9"	""	"154.1"	"0.8"	"161.4"	"190.9"	""	"641"	"69"	"35.000"	"28.000"	"4.52718283051593E-06"	"24"	"0"	"7.565E-07"	"1.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTNEQAIIDVLTK"	"[K].gIGTNEQAIIDVLTk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"677.40155"	"2030.19010"	"2030.18978"	"0.16"	"0.00011"	"18/152"	"18"	"152"	"2941502.94091797"	"HCD"	"MS2"	"14.75248"	"79.8"	"100.000"	"74.2041"	"24691"	"24691"	"24673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.4"	""	"99.0"	""	"108.1"	""	"119.8"	""	"156.1"	"176.9"	""	"639"	"70"	"35.000"	"28.000"	"3.37653194193764E-06"	""	"0"	"2.245E-06"	"1.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTNEQAIIDVLTK"	"[K].gIGTNEQAIIDVLTk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"1015.59912"	"2030.19097"	"2030.18978"	"0.59"	"0.00059"	"17/152"	"17"	"152"	"436602.117004395"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"73.9549"	"24590"	"24590"	"24561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.5"	""	"41.2"	""	"40.8"	""	"64.3"	""	"66.1"	"83.7"	""	"639"	"66"	"35.000"	"28.000"	"7.576538989589E-06"	"19"	"0"	"9.604E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPELLAVGVVDSMTK"	"[K].iPELLAVGVVDSMTk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.40332"	"2030.19541"	"2030.19717"	"-0.87"	"-0.00059"	"13/134"	"13"	"134"	"337973.935791016"	"HCD"	"MS2"	"6.645264"	"12.0"	"100.000"	"90.1969"	"31144"	"31144"	"31136"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.8"	""	"17.5"	""	"22.5"	""	"17.0"	""	"18.1"	"20.8"	""	"604"	"66"	"34.000"	"27.000"	"7.98007444711228E-06"	"17"	"0"	"1.123E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPELLAVGVVDSMTK"	"[K].iPELLAVGVVDSMTk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"0.8615"	"0.0000"	"1"	"1"	"1"	"677.40356"	"2030.19614"	"2030.19717"	"-0.51"	"-0.00034"	"13/134"	"13"	"134"	"208124.916992188"	"HCD"	"MS2"	"15.94815"	"9.5"	"100.000"	"90.0116"	"31042"	"31042"	"31033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.4"	""	"14.8"	""	"12.8"	""	"15.6"	""	"17.1"	"15.4"	""	"603"	"65"	"34.000"	"27.000"	"9.14718192034571E-06"	"25"	"0"	"1.884E-05"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPELLAVGVVDSMTK"	"[K].iPELLAVGVVDSMTk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1015.60205"	"2030.19682"	"2030.19717"	"-0.17"	"-0.00017"	"5/134"	"5"	"134"	"110422.547668457"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"90.4507"	"31232"	"31232"	"31228"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"8.1"	""	"8.8"	""	"5.0"	""	"10.9"	"8.3"	""	"602"	"14"	"34.000"	"27.000"	"1.22339442078729"	"13"	"0.001125"	"0.01522"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPELLAVGVVDSMTK"	"[K].iPELLAVGVVDSMTk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1015.60211"	"2030.19695"	"2030.19717"	"-0.11"	"-0.00011"	"7/134"	"7"	"134"	"102888.557373047"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"90.3538"	"31167"	"31167"	"31161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.4"	""	"4.8"	""	"8.9"	""	"5.1"	""	"13.5"	"8.2"	""	"602"	"16"	"34.000"	"27.000"	"0.834769351500203"	"13"	"0.001125"	"0.01518"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPELLAVGVVDSMTK"	"[K].iPELLAVGVVDSMTk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1015.60254"	"2030.19780"	"2030.19717"	"0.31"	"0.00032"	"4/134"	"4"	"134"	"122796.795593262"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"90.0792"	"31067"	"31067"	"31055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.7"	""	"7.8"	""	"8.8"	""	"4.8"	""	"6.9"	"5.3"	""	"603"	"6"	"34.000"	"27.000"	"8.17122777015089"	"13"	"0.003351"	"0.07596"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAPIGDSPKPPPQR"	"[K].iVAPIGDSPkPPPQR.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.40948"	"2030.21390"	"2030.21627"	"-1.16"	"-0.00079"	"11/124"	"11"	"124"	"2576342.90844727"	"HCD"	"MS2"	"0"	"121.5"	"100.000"	"37.1040"	"9589"	"9589"	"9562"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"203.6"	""	"149.3"	""	"171.6"	""	"186.7"	""	"225.4"	"213.6"	""	"494"	"34"	"33.000"	"26.000"	"0.00999302452492684"	"15"	"0"	"1.255E-06"	"1.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFPEGSVELYAEK"	"[R].fGFPEGSVELYAEk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"677.69763"	"2031.07834"	"2031.08391"	"-2.74"	"-0.00186"	"14/120"	"14"	"120"	"3015876.98181152"	"HCD"	"MS2"	"0"	"104.9"	"100.000"	"67.2476"	"21905"	"21905"	"21888"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.4"	""	"128.9"	""	"130.7"	""	"220.1"	""	"179.7"	"192.4"	""	"1241"	"38"	"37.000"	"30.000"	"0.00907280936750394"	"16"	"0.0001859"	"0.0003327"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FESLPAGSTLIFYK"	"[R].fESLPAGSTLIFYk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"677.72253"	"2031.15305"	"2031.15669"	"-1.79"	"-0.00121"	"11/118"	"11"	"118"	"1408427.19055176"	"HCD"	"MS2"	"38.4185"	"48.6"	"100.000"	"75.4958"	"25270"	"25270"	"25247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.6"	""	"64.6"	""	"60.3"	""	"80.6"	""	"97.6"	"97.7"	""	"942"	"43"	"36.000"	"29.000"	"0.00239343097446024"	"20"	"0"	"3.543E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FESLPAGSTLIFYK"	"[R].fESLPAGSTLIFYk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1016.08044"	"2031.15361"	"2031.15669"	"-1.51"	"-0.00154"	"8/118"	"8"	"118"	"96158.1112060547"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"75.4870"	"25215"	"25215"	"25185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.1"	""	"9.3"	""	"6.6"	""	"8.5"	"1.6"	"13.5"	"11.8"	""	"943"	"14"	"36.000"	"29.000"	"2.02526425219644"	"13"	"0.0003839"	"0.001842"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FESLPAGSTLIFYK"	"[R].fESLPAGSTLIFYk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"677.72321"	"2031.15506"	"2031.15669"	"-0.80"	"-0.00054"	"12/118"	"12"	"118"	"814556.958374023"	"HCD"	"MS2"	"18.92578"	"34.1"	"100.000"	"75.6026"	"25262"	"25262"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.2"	""	"39.4"	""	"50.2"	""	"49.5"	""	"69.2"	"71.6"	""	"941"	"23"	"36.000"	"29.000"	"0.241857538069532"	"16"	"0"	"0.0001746"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNLPGEVTFLPLNK"	"[K].mNLPGEVTFLPLNk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.72729"	"2031.16733"	"2031.17129"	"-1.95"	"-0.00132"	"11/132"	"11"	"132"	"959839.136413574"	"HCD"	"MS2"	"4.716537"	"34.8"	"100.000"	"75.0833"	"25050"	"25050"	"25025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.4"	""	"54.5"	""	"34.6"	""	"48.8"	""	"81.8"	"71.8"	""	"854"	"34"	"36.000"	"29.000"	"0.0168045882219617"	"15"	"0.0001308"	"0.0002739"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFESFIESVPLFK"	"[K].mFESFIESVPLFk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"678.04492"	"2032.12021"	"2032.12294"	"-1.34"	"-0.00091"	"9/106"	"9"	"106"	"139224.47479248"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"98.0483"	"33624"	"33624"	"33619"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.2"	""	"4.6"	""	"6.6"	""	"6.9"	""	"8.9"	"7.2"	""	"1193"	"23"	"37.000"	"30.000"	"0.334665117703369"	"17"	"0.0002277"	"0.001157"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEGLSVLNQAMAVIK"	"[R].tEGLSVLNQAMAVIk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"678.06689"	"2032.18613"	"2032.18767"	"-0.76"	"-0.00051"	"9/134"	"9"	"134"	"1320080.97216797"	"HCD"	"MS2"	"37.87629"	"34.6"	"100.000"	"78.5570"	"26508"	"26508"	"26479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.4"	""	"44.8"	""	"46.6"	""	"53.4"	""	"71.7"	"65.0"	""	"771"	"44"	"35.000"	"28.000"	"0.00159229812017207"	"21"	"0"	"7.829E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEGLSVLNQAMAVIK"	"[R].tEGLSVLNQAMAVIk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"678.06775"	"2032.18869"	"2032.18767"	"0.50"	"0.00034"	"15/134"	"15"	"134"	"1105308.93518066"	"HCD"	"MS2"	"37.84908"	"32.5"	"100.000"	"78.5579"	"26457"	"26457"	"26433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.0"	""	"36.2"	""	"46.3"	""	"53.6"	""	"67.1"	"63.4"	""	"742"	"44"	"35.000"	"28.000"	"0.00135635667688469"	"21"	"0"	"7.452E-06"	"1.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSAVVVDAIPVFLEK"	"[R].sSAVVVDAIPVFLEk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"F1LP64"	"E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1"	"F1LP64"	"E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"678.07465"	"2032.20938"	"2032.20945"	"-0.03"	"-0.00002"	"12/138"	"12"	"138"	"687783.229309082"	"HCD"	"MS2"	"19.25113"	"29.1"	"100.000"	"78.9176"	"26604"	"26604"	"26577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.5"	""	"39.5"	""	"30.9"	""	"46.6"	""	"52.5"	"66.6"	""	"629"	"19"	"34.000"	"27.000"	"0.398676511812293"	"15"	"0.0001308"	"0.0002293"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFADFEIPYLQK"	"[K].gFFADFEIPYLQk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63072"	"ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Bst1 PE=2 SV=1"	"Q63072"	"ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Bst1 PE=2 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"678.37604"	"2033.11356"	"2033.11482"	"-0.62"	"-0.00042"	"10/102"	"10"	"102"	"157861.15057373"	"HCD"	"MS2"	"34.36177"	"7.6"	"100.000"	"89.5132"	"30887"	"30887"	"30876"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"7.8"	""	"10.4"	""	"11.9"	""	"15.3"	"17.4"	""	"1192"	"18"	"37.000"	"30.000"	"1.0309705500922"	"14"	"0.0001889"	"0.0006338"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFADFEIPYLQK"	"[K].gFFADFEIPYLQk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63072"	"ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Bst1 PE=2 SV=1"	"Q63072"	"ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Bst1 PE=2 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"678.37646"	"2033.11484"	"2033.11482"	"0.01"	"0.00001"	"7/102"	"7"	"102"	"158170.189025879"	"HCD"	"MS2"	"9.8036"	"7.7"	"100.000"	"89.4189"	"30811"	"30811"	"30803"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.2"	""	"10.2"	""	"7.2"	""	"15.2"	""	"16.4"	"16.6"	""	"1196"	"19"	"37.000"	"30.000"	"0.718954131901213"	"17"	"0.0003839"	"0.001668"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYAPAWVAPEALQK"	"[R].mYAPAWVAPEALQk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"678.38062"	"2033.12729"	"2033.12943"	"-1.05"	"-0.00071"	"13/106"	"13"	"106"	"5121228.57342529"	"HCD"	"MS2"	"10.21045"	"119.5"	"100.000"	"65.8246"	"21332"	"21332"	"21315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.0"	""	"156.3"	""	"152.7"	""	"139.5"	""	"221.5"	"252.7"	""	"1153"	"52"	"37.000"	"30.000"	"0.000327189465018027"	"23"	"0"	"1.139E-05"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYAPAWVAPEALQK"	"[R].mYAPAWVAPEALQk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"678.38116"	"2033.12894"	"2033.12943"	"-0.24"	"-0.00016"	"13/106"	"13"	"106"	"5453643.12994385"	"HCD"	"MS2"	"15.98142"	"118.1"	"100.000"	"65.9295"	"21322"	"21322"	"21305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.5"	""	"163.9"	""	"135.9"	""	"139.2"	"2.7"	"214.7"	"257.4"	""	"1147"	"51"	"37.000"	"30.000"	"0.000465086166679178"	"22"	"0"	"1.261E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVARPEPATGFTLEFR"	"[R].lVARPEPATGFTLEFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"678.38324"	"2033.13517"	"2033.13813"	"-1.46"	"-0.00099"	"12/160"	"12"	"160"	"2129153.17071533"	"HCD"	"MS2"	"33.22726"	"77.2"	"100.000"	"53.6767"	"16324"	"16324"	"16307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.1"	""	"112.3"	""	"126.3"	""	"104.7"	"0.7"	"125.7"	"130.8"	""	"1173"	"45"	"37.000"	"30.000"	"0.00174288212761435"	"15"	"0"	"1.314E-06"	"1.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVARPEPATGFTLEFR"	"[R].lVARPEPATGFTLEFR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"678.38330"	"2033.13535"	"2033.13813"	"-1.37"	"-0.00093"	"18/160"	"18"	"160"	"2909351.5291748"	"HCD"	"MS2"	"33.83718"	"87.6"	"100.000"	"53.8966"	"16466"	"16466"	"16446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.5"	""	"126.7"	""	"144.8"	""	"136.6"	"1.1"	"120.8"	"148.5"	""	"1166"	"41"	"37.000"	"30.000"	"0.00467378310955017"	"15"	"0"	"2.986E-07"	"1.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPLGGVISNYLLEK"	"[K].gDPLGGVISNYLLEk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"678.39459"	"2033.16922"	"2033.16831"	"0.45"	"0.00030"	"16/146"	"16"	"146"	"791120.741699219"	"HCD"	"MS2"	"33.90173"	"28.4"	"100.000"	"79.3692"	"26839"	"26839"	"26815"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.9"	""	"30.7"	""	"37.6"	""	"48.6"	""	"57.6"	"66.2"	""	"890"	"27"	"36.000"	"29.000"	"0.0991653641425285"	"17"	"0"	"1.194E-05"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQSILTGESVSVIK"	"[R].vDQSILTGESVSVIk.[H]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"678.40088"	"2033.18808"	"2033.18944"	"-0.67"	"-0.00045"	"14/156"	"14"	"156"	"1685349.56976318"	"HCD"	"MS2"	"31.53245"	"69.0"	"100.000"	"60.1770"	"19026"	"19026"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.6"	""	"89.7"	""	"80.8"	""	"113.6"	""	"126.4"	"168.1"	""	"789"	"36"	"35.000"	"28.000"	"0.0103287319674239"	"20"	"0"	"7.229E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDQSILTGESVSVIK"	"[R].vDQSILTGESVSVIk.[H]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"678.40234"	"2033.19248"	"2033.18944"	"1.49"	"0.00101"	"14/156"	"14"	"156"	"1635041.86981201"	"HCD"	"MS2"	"19.58841"	"65.2"	"100.000"	"60.0046"	"18902"	"18902"	"18873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.6"	""	"71.6"	""	"79.2"	""	"108.2"	""	"118.1"	"174.9"	""	"753"	"43"	"35.000"	"28.000"	"0.0017569725668833"	"18"	"0"	"8.451E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLINNAFQLVSIGK"	"[R].aSLINNAFQLVSIGk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"678.40869"	"2033.21152"	"2033.21593"	"-2.17"	"-0.00147"	"11/152"	"11"	"152"	"254648.188842773"	"HCD"	"MS2"	"19.51491"	"13.9"	"100.000"	"81.6174"	"27756"	"27756"	"27726"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.7"	""	"18.8"	""	"23.2"	""	"21.0"	""	"22.2"	"30.2"	""	"585"	"15"	"34.000"	"27.000"	"1.01420528757365"	"13"	"0.0001889"	"0.0003882"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLILYYFSDAK"	"[K].nNDLILYYFSDAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"678.70239"	"2034.09262"	"2034.09481"	"-1.08"	"-0.00073"	"14/136"	"14"	"136"	"1190505.74127197"	"HCD"	"MS2"	"2.902843"	"45.1"	"100.000"	"75.7735"	"25331"	"25331"	"25313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.2"	""	"68.6"	""	"58.5"	""	"78.1"	""	"82.1"	"76.3"	""	"1354"	"38"	"38.000"	"31.000"	"0.0113132834588835"	"15"	"0"	"4.561E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLILYYFSDAK"	"[K].nNDLILYYFSDAk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"678.70282"	"2034.09391"	"2034.09481"	"-0.45"	"-0.00030"	"13/136"	"13"	"136"	"1469635.71636963"	"HCD"	"MS2"	"3.795591"	"48.9"	"100.000"	"75.6897"	"25349"	"25349"	"25327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.4"	""	"73.0"	""	"78.0"	""	"74.9"	""	"85.9"	"83.3"	""	"1351"	"46"	"38.000"	"31.000"	"0.00156179976576362"	"22"	"0"	"8.579E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPSSQVFFGPALDTVR"	"[R].lAPSSQVFFGPALDTVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"678.71149"	"2034.11991"	"2034.12214"	"-1.10"	"-0.00074"	"17/172"	"17"	"172"	"2623577.43273926"	"HCD"	"MS2"	"28.14737"	"37.9"	"100.000"	"69.0624"	"22644"	"22644"	"22618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.1"	""	"43.6"	""	"48.4"	""	"74.4"	"0.3"	"66.7"	"86.6"	""	"1267"	"56"	"38.000"	"31.000"	"0.000168169262351151"	"20"	"0"	"1.915E-06"	"1.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPSSQVFFGPALDTVR"	"[R].lAPSSQVFFGPALDTVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"1017.56372"	"2034.12016"	"2034.12214"	"-0.97"	"-0.00099"	"20/172"	"20"	"172"	"593044.695922852"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"69.1455"	"22678"	"22678"	"22650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.1"	""	"27.0"	""	"28.2"	""	"46.4"	""	"53.2"	"48.1"	""	"1268"	"56"	"38.000"	"31.000"	"0.000172222249644398"	"21"	"0"	"1.848E-05"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPSSQVFFGPALDTVR"	"[R].lAPSSQVFFGPALDTVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"678.71179"	"2034.12082"	"2034.12214"	"-0.65"	"-0.00044"	"18/172"	"18"	"172"	"3594149.88452148"	"HCD"	"MS2"	"26.9847"	"40.1"	"100.000"	"69.2623"	"22674"	"22674"	"22650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.2"	""	"53.5"	""	"53.4"	""	"72.8"	"0.6"	"70.8"	"87.5"	""	"1266"	"60"	"38.000"	"31.000"	"6.17168440675107E-05"	"19"	"0"	"5.483E-07"	"1.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPSSQVFFGPALDTVR"	"[R].lAPSSQVFFGPALDTVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"1017.56451"	"2034.12175"	"2034.12214"	"-0.19"	"-0.00020"	"13/172"	"13"	"172"	"650314.139770508"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"69.3084"	"22693"	"22693"	"22666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.6"	""	"26.1"	""	"34.1"	""	"53.8"	""	"52.9"	"59.0"	""	"1251"	"61"	"37.000"	"30.000"	"4.51052728228904E-05"	"21"	"0"	"8.081E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPSSQVFFGPALDTVR"	"[R].lAPSSQVFFGPALDTVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"678.71216"	"2034.12192"	"2034.12214"	"-0.11"	"-0.00007"	"18/172"	"18"	"172"	"3011318.95623779"	"HCD"	"MS2"	"22.75556"	"74.2"	"100.000"	"69.3689"	"22769"	"22769"	"22746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.4"	""	"82.9"	""	"99.9"	""	"110.6"	"3.4"	"134.5"	"167.8"	""	"1253"	"26"	"37.000"	"30.000"	"0.173748504556438"	"14"	"0"	"4.751E-06"	"1.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPSSQVFFGPALDTVR"	"[R].lAPSSQVFFGPALDTVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"678.71289"	"2034.12412"	"2034.12214"	"0.97"	"0.00066"	"17/172"	"17"	"172"	"2285862.45178223"	"HCD"	"MS2"	"36.65926"	"77.5"	"100.000"	"69.5734"	"22801"	"22801"	"22778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.6"	""	"93.4"	""	"101.5"	""	"105.4"	"2.3"	"140.4"	"190.3"	""	"1250"	"19"	"37.000"	"30.000"	"0.872730225659962"	"14"	"0"	"0.0001159"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].aHFSVMGDILSSAIk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7593"	"0.0000"	"1"	"1"	"1"	"678.71936"	"2034.14353"	"2034.14580"	"-1.12"	"-0.00076"	"18/128"	"18"	"128"	"9253105.93908691"	"HCD"	"MS2"	"20.8695"	"158.7"	"79.608"	"64.6825"	"20812"	"20812"	"20793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.1"	""	"266.3"	""	"233.1"	""	"279.3"	"1.0"	"218.7"	"257.7"	""	"1123"	"54"	"37.000"	"30.000"	"0.000236238001837866"	"29"	"0"	"1.972E-06"	"1.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].aHFSVMGDILSSAIk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.7407"	"0.0000"	"1"	"1"	"1"	"509.29144"	"2034.14394"	"2034.14580"	"-0.92"	"-0.00047"	"15/128"	"15"	"128"	"4208819.76916504"	"HCD"	"MS2"	"5.67625"	"78.6"	"100.000"	"64.6090"	"20782"	"20782"	"20761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.5"	""	"134.8"	""	"124.4"	""	"139.4"	""	"108.2"	"127.0"	""	"1125"	"54"	"37.000"	"30.000"	"0.000219342367505556"	"30"	"0"	"5.355E-06"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].aHFSVMGDILSSAIk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"678.71960"	"2034.14426"	"2034.14580"	"-0.76"	"-0.00051"	"15/128"	"15"	"128"	"10517796.4984741"	"HCD"	"MS2"	"13.83509"	"159.6"	"70.250"	"64.6492"	"20852"	"20852"	"20835"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"258.3"	""	"255.8"	""	"238.6"	""	"275.3"	""	"226.0"	"253.7"	""	"1141"	"43"	"37.000"	"30.000"	"0.00295975422208972"	"20"	"0"	"7.946E-06"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].aHFSVMGDILSSAIk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"678.71979"	"2034.14481"	"2034.14580"	"-0.49"	"-0.00033"	"19/128"	"19"	"128"	"14008741.6124268"	"HCD"	"MS2"	"9.309703"	"255.9"	"85.724"	"64.3670"	"20683"	"20683"	"20665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"418.1"	""	"430.3"	""	"382.6"	""	"470.6"	"2.9"	"339.7"	"370.1"	""	"1131"	"74"	"37.000"	"30.000"	"2.27212703535076E-06"	""	"0"	"9.436E-07"	"1.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].aHFSVMGDILSSAIk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.6833"	"0.0000"	"1"	"1"	"1"	"509.29181"	"2034.14541"	"2034.14580"	"-0.20"	"-0.00010"	"15/128"	"15"	"128"	"3785364.37408447"	"HCD"	"MS2"	"14.39492"	"69.5"	"100.000"	"64.6239"	"20841"	"20841"	"20819"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.9"	""	"104.9"	""	"110.4"	""	"126.3"	"2.5"	"92.4"	"110.9"	""	"1146"	"60"	"37.000"	"30.000"	"5.63838363601129E-05"	""	"0"	"2.771E-06"	"1.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].aHFSVMGDILSSAIk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8219"	"0.0000"	"1"	"1"	"1"	"678.72003"	"2034.14554"	"2034.14580"	"-0.13"	"-0.00009"	"19/128"	"19"	"128"	"14223528.6467896"	"HCD"	"MS2"	"11.56034"	"284.5"	"100.000"	"64.3452"	"20727"	"20727"	"20707"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"452.6"	""	"461.4"	""	"452.0"	""	"526.9"	"3.3"	"377.8"	"410.3"	""	"1146"	"73"	"37.000"	"30.000"	"2.77430766625688E-06"	"30"	"0"	"9.579E-07"	"1.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILTLTGVSSLEDVK"	"[K].tILTLTGVSSLEDVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"1017.60822"	"2034.20915"	"2034.20984"	"-0.34"	"-0.00034"	"9/136"	"9"	"136"	"151847.669616699"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"72.4603"	"23980"	"23980"	"23953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.0"	""	"14.3"	""	"17.2"	""	"21.1"	""	"17.7"	"25.8"	""	"616"	"26"	"34.000"	"27.000"	"0.0752576610229743"	"16"	"0.0001889"	"0.001066"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILTLTGVSSLEDVK"	"[K].tILTLTGVSSLEDVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"678.74146"	"2034.20981"	"2034.20984"	"-0.02"	"-0.00001"	"16/136"	"16"	"136"	"2544138.83453369"	"HCD"	"MS2"	"28.13738"	"93.9"	"100.000"	"72.3872"	"24001"	"24001"	"23983"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"148.3"	""	"134.1"	""	"130.2"	""	"146.0"	""	"171.3"	"164.6"	""	"599"	"37"	"34.000"	"27.000"	"0.00656745078137459"	"17"	"0"	"4.023E-05"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILTLTGVSSLEDVK"	"[K].tILTLTGVSSLEDVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"678.74268"	"2034.21347"	"2034.20984"	"1.78"	"0.00121"	"15/136"	"15"	"136"	"2668427.17816162"	"HCD"	"MS2"	"32.95895"	"101.3"	"100.000"	"72.4394"	"23971"	"23971"	"23953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.7"	""	"139.7"	""	"148.6"	""	"158.3"	""	"173.9"	"177.7"	""	"611"	"36"	"34.000"	"27.000"	"0.00810981999183527"	"15"	"0"	"5.031E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEFLEETLTPEK"	"[K].iEEFLEETLTPEk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"679.37738"	"2036.11759"	"2036.12036"	"-1.36"	"-0.00092"	"8/116"	"8"	"116"	"179337.354125977"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"83.3727"	"28472"	"28472"	"28445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.4"	""	"13.7"	""	"13.0"	""	"21.4"	""	"22.2"	"21.7"	""	"1256"	"18"	"37.000"	"30.000"	"0.889118493813047"	"16"	"0.0001889"	"0.000594"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEFLEETLTPEK"	"[K].iEEFLEETLTPEk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.7447"	"0.0000"	"1"	"1"	"1"	"679.37805"	"2036.11960"	"2036.12036"	"-0.37"	"-0.00025"	"12/116"	"12"	"116"	"610483.792419434"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"82.9476"	"28247"	"28247"	"28224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.8"	""	"19.3"	""	"21.1"	""	"43.0"	"0.9"	"52.9"	"51.9"	""	"1250"	"47"	"37.000"	"30.000"	"0.00131789259370831"	"27"	"0"	"1.563E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEFLEETLTPEK"	"[K].iEEFLEETLTPEk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"679.37848"	"2036.12088"	"2036.12036"	"0.26"	"0.00017"	"11/116"	"11"	"116"	"847150.227416992"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"83.0507"	"28340"	"28340"	"28317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.1"	""	"19.2"	""	"23.3"	""	"61.6"	""	"67.5"	"71.6"	""	"1243"	"45"	"37.000"	"30.000"	"0.00178830311475822"	"28"	"0"	"7.526E-06"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAPPEAPVTGYMFGK"	"[R].iAPPEAPVTGYMFGk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"679.38184"	"2036.13095"	"2036.12909"	"0.92"	"0.00062"	"14/120"	"14"	"120"	"1574058.52392578"	"HCD"	"MS2"	"19.60234"	"59.9"	"100.000"	"65.2059"	"21026"	"21026"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.7"	""	"85.5"	""	"107.2"	""	"87.1"	""	"96.5"	"100.9"	""	"1181"	"35"	"37.000"	"30.000"	"0.0171482537746126"	"16"	"0.0001308"	"0.0002235"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAAELHLVHWNPK"	"[K].yAAELHLVHWNPk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"509.79221"	"2036.14699"	"2036.14819"	"-0.59"	"-0.00030"	"14/100"	"14"	"100"	"8380633.5881958"	"HCD"	"MS2"	"52.59803"	"174.5"	"100.000"	"44.0386"	"12414"	"12414"	"12390"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.1"	"2.8"	"141.6"	""	"168.7"	""	"202.3"	"2.7"	"223.2"	"687.7"	""	"1083"	"25"	"37.000"	"30.000"	"0.156891155274027"	"14"	"0"	"2.251E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAAELHLVHWNPK"	"[K].yAAELHLVHWNPk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"509.79236"	"2036.14760"	"2036.14819"	"-0.29"	"-0.00015"	"14/100"	"14"	"100"	"9922143.76300049"	"HCD"	"MS2"	"58.61744"	"188.9"	"100.000"	"44.2361"	"12544"	"12544"	"12524"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"277.4"	""	"162.7"	""	"162.0"	""	"191.7"	""	"202.9"	"799.9"	""	"1078"	"30"	"37.000"	"30.000"	"0.0573573086822906"	"14"	"0"	"8.967E-06"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEISSVPTFLFFK"	"[K].yEISSVPTFLFFk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"679.38824"	"2036.15018"	"2036.15087"	"-0.34"	"-0.00023"	"11/108"	"11"	"108"	"430321.159118652"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"89.7163"	"30927"	"30927"	"30915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.5"	""	"25.3"	""	"32.6"	""	"37.4"	""	"36.4"	"36.6"	""	"1074"	"17"	"37.000"	"30.000"	"1.05675493757258"	"20"	"0.0001308"	"0.0002236"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEISSVPTFLFFK"	"[K].yEISSVPTFLFFk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1018.58118"	"2036.15508"	"2036.15087"	"2.07"	"0.00210"	"5/108"	"5"	"108"	"73046.0101318359"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"89.7183"	"30966"	"30966"	"30955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.7"	""	"7.1"	""	"7.7"	""	"6.0"	""	"8.5"	"8.2"	""	"1008"	"13"	"37.000"	"30.000"	"2.33040034785227"	"13"	"0.00175"	"0.02431"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAPPEAPVTGYMFGK"	"[R].iAPPEAPVTGYMFGk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.39026"	"2036.15622"	"2036.12909"	"13.33"	"0.00904"	"14/120"	"14"	"120"	"2153995.94995117"	"HCD"	"MS2"	"31.60358"	"68.1"	"100.000"	"65.1078"	"21039"	"21039"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.0"	""	"99.7"	""	"111.4"	""	"87.4"	""	"113.7"	"118.6"	""	"1002"	"30"	"36.000"	"30.000"	"0.0525820756754813"	"15"	"0.0002277"	"0.001197"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEISSVPTFLFFK"	"[K].yEISSVPTFLFFk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1018.58191"	"2036.15654"	"2036.15087"	"2.78"	"0.00283"	"5/108"	"5"	"108"	"67539.1582641602"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"89.6279"	"30893"	"30893"	"30877"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.7"	""	"3.3"	""	"9.0"	""	"7.7"	""	"9.5"	"8.7"	""	"1003"	"12"	"37.000"	"30.000"	"3.10649699151006"	"14"	"0.00103"	"0.01185"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAAFKPVGSTSVK"	"[R].sAAAFkPVGSTSVk.[S]"	"N-Term(TMT6plex); K6(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.74823"	"2037.23014"	"2037.23114"	"-0.49"	"-0.00033"	"11/142"	"11"	"142"	"2099956.82318115"	"HCD"	"MS2"	"0"	"150.0"	"100.000"	"36.2166"	"9268"	"9268"	"9241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.3"	""	"166.5"	""	"204.4"	""	"274.6"	""	"315.2"	"283.6"	""	"406"	"9"	"33.000"	"26.000"	"2.54387658513107"	"13"	"0"	"3.854E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAAFKPVGSTSVK"	"[R].sAAAFkPVGSTSVk.[S]"	"N-Term(TMT6plex); K6(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.74829"	"2037.23032"	"2037.23114"	"-0.40"	"-0.00027"	"10/142"	"10"	"142"	"1707472.33831787"	"HCD"	"MS2"	"12.93854"	"142.2"	"100.000"	"36.1319"	"9190"	"9190"	"9162"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.4"	""	"164.4"	""	"168.9"	""	"278.6"	"0.0"	"304.1"	"264.4"	""	"406"	"9"	"33.000"	"26.000"	"2.34151011337682"	"13"	"0"	"0.0001567"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNYGFEYLGVQDK"	"[K].fNYGFEYLGVQDk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"1019.53589"	"2038.06450"	"2038.06860"	"-2.01"	"-0.00205"	"9/130"	"9"	"130"	"457271.049316406"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"67.5779"	"22038"	"22038"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.1"	""	"65.1"	""	"66.2"	""	"76.3"	""	"92.5"	"80.9"	""	"1268"	"45"	"38.000"	"31.000"	"0.00204686527316581"	"20"	"0"	"3.94E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNYGFEYLGVQDK"	"[K].fNYGFEYLGVQDk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.02661"	"2038.06528"	"2038.06860"	"-1.63"	"-0.00111"	"13/130"	"13"	"130"	"2021381.39538574"	"HCD"	"MS2"	"0"	"77.1"	"100.000"	"67.5169"	"22013"	"22013"	"21994"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.2"	""	"93.4"	""	"104.0"	""	"130.6"	"0.4"	"143.0"	"163.4"	""	"1270"	"27"	"38.000"	"31.000"	"0.113965585303865"	"14"	"0"	"5.937E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNYGFEYLGVQDK"	"[K].fNYGFEYLGVQDk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"1019.53760"	"2038.06792"	"2038.06860"	"-0.33"	"-0.00034"	"12/130"	"12"	"130"	"422058.119445801"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"67.7368"	"22052"	"22052"	"22029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.6"	""	"54.0"	""	"54.4"	""	"71.6"	""	"76.2"	"94.1"	""	"1291"	"41"	"38.000"	"31.000"	"0.00496473699205006"	"20"	"0"	"8.056E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNYGFEYLGVQDK"	"[K].fNYGFEYLGVQDk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8103"	"0.0000"	"1"	"1"	"1"	"680.02808"	"2038.06968"	"2038.06860"	"0.53"	"0.00036"	"14/130"	"14"	"130"	"2988273.04376221"	"HCD"	"MS2"	"0"	"95.4"	"100.000"	"67.6419"	"22014"	"22014"	"21985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.1"	""	"109.9"	""	"138.1"	""	"159.6"	""	"178.1"	"190.0"	""	"1281"	"58"	"38.000"	"31.000"	"0.000111819908894558"	"27"	"0"	"1.287E-05"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPLVTIQSSGSFSQK"	"[K].tPLVTIQSSGSFSQk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1019.58307"	"2038.15886"	"2038.15848"	"0.19"	"0.00019"	"12/152"	"12"	"152"	"557584.654296875"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"48.6648"	"14349"	"14349"	"14319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.1"	""	"62.4"	""	"46.6"	""	"71.0"	"1.2"	"55.8"	"65.6"	""	"977"	"81"	"36.000"	"29.000"	"3.5881002459475E-07"	"18"	"0"	"4.445E-06"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFGDPVVQSDMK"	"[R].kFGDPVVQSDMk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.05865"	"2038.16141"	"2038.16101"	"0.20"	"0.00013"	"13/122"	"13"	"122"	"2914537.72229004"	"HCD"	"MS2"	"4.288116"	"168.3"	"100.000"	"39.1500"	"10472"	"10472"	"10446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.0"	""	"234.8"	""	"233.5"	""	"201.0"	"6.6"	"301.9"	"330.2"	""	"968"	"13"	"36.000"	"29.000"	"2.16693239221359"	"13"	"0.0001859"	"0.0003511"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KFGDPVVQSDMK"	"[R].kFGDPVVQSDMk.[H]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"1"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"680.05872"	"2038.16159"	"2038.16101"	"0.29"	"0.00020"	"10/122"	"10"	"122"	"3745672.98577881"	"HCD"	"MS2"	"2.155379"	"196.6"	"100.000"	"39.0340"	"10381"	"10381"	"10358"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"326.0"	""	"275.1"	""	"285.7"	""	"218.9"	"0.6"	"370.3"	"385.7"	""	"976"	"47"	"36.000"	"29.000"	"0.00102192687845523"	"16"	"0"	"2.026E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDPLPAWQQVGK"	"[R].vELDPLPAWQQVGk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"1019.58832"	"2038.16936"	"2038.17373"	"-2.15"	"-0.00219"	"14/116"	"14"	"116"	"448778.659179688"	"HCD"	"MS2"	"100"	"27.4"	"100.000"	"68.2506"	"22313"	"22313"	"22282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.1"	""	"38.9"	""	"38.6"	""	"39.0"	""	"55.2"	"49.9"	""	"875"	"40"	"36.000"	"29.000"	"0.00429514725071243"	"22"	"0"	"0.0001203"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDPLPAWQQVGK"	"[R].vELDPLPAWQQVGk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1019.58844"	"2038.16960"	"2038.17373"	"-2.03"	"-0.00206"	"5/116"	"5"	"116"	"128432.508972168"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"68.6012"	"22456"	"22456"	"22426"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.5"	""	"14.3"	""	"10.7"	""	"11.8"	""	"20.2"	"21.7"	""	"873"	"5"	"36.000"	"29.000"	"13.1215230609722"	"13"	"0.001966"	"0.03109"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDPLPAWQQVGK"	"[R].vELDPLPAWQQVGk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.9661"	"0.0000"	"1"	"1"	"1"	"1019.58911"	"2038.17095"	"2038.17373"	"-1.37"	"-0.00139"	"15/116"	"15"	"116"	"586986.755432129"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"68.3996"	"22322"	"22322"	"22298"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.8"	""	"58.7"	""	"62.5"	""	"53.9"	""	"61.6"	"72.9"	""	"854"	"59"	"36.000"	"29.000"	"5.38800357270217E-05"	"18"	"0"	"2.134E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDPLPAWQQVGK"	"[R].vELDPLPAWQQVGk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"4"	"4"	"0.8431"	"0.0000"	"1"	"1"	"1"	"510.29858"	"2038.17251"	"2038.17373"	"-0.60"	"-0.00031"	"14/116"	"14"	"116"	"1607345.08728027"	"HCD"	"MS2"	"40.30835"	"36.4"	"100.000"	"68.5196"	"22371"	"22371"	"22346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.8"	""	"56.7"	""	"48.3"	""	"51.8"	""	"76.5"	"70.0"	""	"840"	"51"	"36.000"	"29.000"	"0.000306372154306919"	"23"	"0"	"5.212E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDPLPAWQQVGK"	"[R].vELDPLPAWQQVGk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.06262"	"2038.17331"	"2038.17373"	"-0.21"	"-0.00014"	"12/116"	"12"	"116"	"1781708.88226318"	"HCD"	"MS2"	"5.626752"	"61.3"	"100.000"	"68.6680"	"22483"	"22483"	"22458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.3"	""	"87.8"	""	"87.6"	""	"98.5"	""	"101.2"	"116.6"	""	"835"	"11"	"36.000"	"29.000"	"2.96248718124715"	"13"	"0.0001889"	"0.000916"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDPLPAWQQVGK"	"[R].vELDPLPAWQQVGk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"680.06287"	"2038.17405"	"2038.17373"	"0.15"	"0.00010"	"16/116"	"16"	"116"	"9877622.5335083"	"HCD"	"MS2"	"13.03992"	"245.4"	"100.000"	"68.2649"	"22318"	"22318"	"22298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.3"	""	"376.1"	""	"373.3"	""	"373.3"	""	"440.0"	"455.6"	""	"820"	"41"	"36.000"	"29.000"	"0.00352195543817213"	"21"	"0"	"2.152E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDPLPAWQQVGK"	"[R].vELDPLPAWQQVGk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"680.06293"	"2038.17423"	"2038.17373"	"0.24"	"0.00017"	"14/116"	"14"	"116"	"4498064.7822876"	"HCD"	"MS2"	"1.94812"	"125.2"	"100.000"	"68.6624"	"22429"	"22429"	"22410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.1"	""	"183.5"	""	"186.5"	""	"204.4"	""	"213.5"	"241.5"	""	"818"	"37"	"36.000"	"29.000"	"0.00758094433976658"	"18"	"0"	"2.607E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDPLPAWQQVGK"	"[R].vELDPLPAWQQVGk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.8971"	"0.0000"	"1"	"1"	"1"	"680.06299"	"2038.17441"	"2038.17373"	"0.33"	"0.00023"	"16/116"	"16"	"116"	"6691119.24914551"	"HCD"	"MS2"	"37.39223"	"195.2"	"100.000"	"68.3582"	"22305"	"22305"	"22282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"281.4"	""	"276.9"	""	"293.8"	""	"311.9"	""	"324.7"	"358.9"	""	"833"	"68"	"36.000"	"29.000"	"6.16048643672059E-06"	"24"	"0"	"4.303E-06"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMMLNIINSSITTK"	"[R].dMMLNIINSSITTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"680.38098"	"2039.12839"	"2039.12810"	"0.14"	"0.00010"	"15/146"	"15"	"146"	"1170873.15551758"	"HCD"	"MS2"	"2.827602"	"43.1"	"100.000"	"73.7082"	"24489"	"24489"	"24465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.3"	""	"55.6"	""	"59.2"	""	"58.2"	""	"85.6"	"90.1"	""	"1174"	"43"	"37.000"	"30.000"	"0.00277101005221728"	"24"	"0"	"2.302E-05"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMMLNIINSSITTK"	"[R].dMMLNIINSSITTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"680.38135"	"2039.12949"	"2039.12810"	"0.68"	"0.00046"	"15/146"	"15"	"146"	"1260438.60900879"	"HCD"	"MS2"	"0"	"41.7"	"100.000"	"73.6575"	"24520"	"24520"	"24495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.8"	""	"47.8"	""	"55.0"	""	"64.7"	""	"78.0"	"87.5"	""	"1169"	"75"	"37.000"	"30.000"	"1.94439508900346E-06"	"30"	"0"	"1.047E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAAELHLVHWNTK"	"[K].yAAELHLVHWNTk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.71857"	"2040.14115"	"2040.14310"	"-0.96"	"-0.00065"	"14/116"	"14"	"116"	"2498943.47790527"	"HCD"	"MS2"	"2.808523"	"132.3"	"100.000"	"42.4169"	"11761"	"11761"	"11740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"175.7"	""	"169.3"	""	"180.6"	""	"232.7"	"1.8"	"249.5"	"244.4"	""	"1051"	"32"	"37.000"	"30.000"	"0.0300312023571066"	"15"	"0"	"8.789E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAAELHLVHWNTK"	"[K].yAAELHLVHWNTk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"680.71912"	"2040.14280"	"2040.14310"	"-0.15"	"-0.00010"	"12/116"	"12"	"116"	"3737651.03790283"	"HCD"	"MS2"	"3.60047"	"168.8"	"100.000"	"42.6869"	"11916"	"11916"	"11891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"229.8"	""	"207.6"	""	"222.1"	""	"336.7"	"1.2"	"294.4"	"307.3"	""	"1034"	"55"	"37.000"	"30.000"	"0.00018175674775313"	"19"	"0"	"1.152E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAAELHLVHWNTK"	"[K].yAAELHLVHWNTk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"510.79144"	"2040.14394"	"2040.14310"	"0.41"	"0.00021"	"17/116"	"17"	"116"	"33682617.6629639"	"HCD"	"MS2"	"46.16989"	"579.5"	"100.000"	"42.3201"	"11722"	"11722"	"11692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"735.4"	""	"616.1"	""	"790.9"	""	"1220.5"	"6.1"	"1035.0"	"1087.7"	""	"1030"	"57"	"37.000"	"30.000"	"0.000100416996887539"	"16"	"0"	"3.454E-06"	"1.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAAELHLVHWNTK"	"[K].yAAELHLVHWNTk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"510.79163"	"2040.14467"	"2040.14310"	"0.77"	"0.00039"	"10/116"	"10"	"116"	"31615284.916626"	"HCD"	"MS2"	"48.32959"	"613.5"	"100.000"	"42.6111"	"11885"	"11885"	"11859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"769.1"	""	"685.3"	""	"815.2"	""	"1294.4"	"0.5"	"1126.7"	"1124.0"	""	"1027"	"39"	"37.000"	"30.000"	"0.00627394125494661"	"15"	"0"	"2.423E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNGAGYFLEHLAFK"	"[K].nnGAGYFLEHLAFk.[G]"	"N-Term(TMT6plex); N1(Deamidated); N2(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"681.03735"	"2041.09751"	"2041.07950"	"8.82"	"0.00600"	"9/130"	"9"	"130"	"749722.858032227"	"HCD"	"MS2"	"37.22522"	"37.9"	"100.000"	"70.7101"	"23265"	"23265"	"23235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.6"	""	"51.4"	""	"47.6"	""	"55.0"	"2.2"	"75.8"	"75.6"	""	"1272"	"19"	"38.000"	"31.000"	"0.813686509444186"	"19"	"0.006001"	"0.2051"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLFGVPGAFTPGCSK"	"[K].gVLFGVPGAFTPGcSk.[T]"	"N-Term(TMT6plex); C14(Methylthio); K16(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"681.03784"	"2041.09897"	"2041.10150"	"-1.24"	"-0.00084"	"15/128"	"15"	"128"	"2160827.85388184"	"HCD"	"MS2"	"15.81612"	"59.4"	"100.000"	"75.5880"	"25308"	"25308"	"25279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.8"	""	"82.8"	""	"97.6"	""	"66.9"	"1.1"	"89.4"	"119.0"	""	"1291"	"34"	"38.000"	"31.000"	"0.0238724090048162"	"16"	"0"	"8.469E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLFGVPGAFTPGCSK"	"[K].gVLFGVPGAFTPGcSk.[T]"	"N-Term(TMT6plex); C14(Methylthio); K16(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.03864"	"2041.10135"	"2041.10150"	"-0.07"	"-0.00005"	"16/128"	"16"	"128"	"2211882.21533203"	"HCD"	"MS2"	"5.099625"	"60.9"	"100.000"	"75.6372"	"25276"	"25276"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.1"	""	"85.7"	""	"109.6"	""	"62.8"	""	"103.6"	"106.8"	""	"1280"	"35"	"38.000"	"31.000"	"0.0220891993174948"	"15"	"0"	"6.716E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTTEQVTAMLLSK"	"[R].nFTTEQVTAMLLSk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1021.07306"	"2041.13884"	"2041.14038"	"-0.76"	"-0.00077"	"12/150"	"12"	"150"	"337217.170532227"	"HCD"	"MS2"	"16.00936"	"27.9"	"100.000"	"76.2254"	"25563"	"25563"	"25535"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.9"	""	"45.2"	""	"40.4"	""	"34.0"	"0.3"	"43.2"	"53.1"	""	"1093"	"46"	"37.000"	"30.000"	"0.00149138635830459"	"15"	"0"	"4.923E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTTEQVTAMLLSK"	"[R].nFTTEQVTAMLLSk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9661"	"0.0000"	"1"	"1"	"1"	"1021.07330"	"2041.13933"	"2041.14038"	"-0.52"	"-0.00053"	"17/150"	"17"	"150"	"326859.304504395"	"HCD"	"MS2"	"0"	"28.6"	"100.000"	"76.3100"	"25546"	"25546"	"25521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.7"	""	"38.7"	""	"42.8"	""	"29.5"	"1.7"	"55.3"	"54.0"	""	"1096"	"59"	"37.000"	"30.000"	"7.22404692728911E-05"	"18"	"0"	"5.856E-06"	"1.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTTEQVTAMLLSK"	"[R].nFTTEQVTAMLLSk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"681.05157"	"2041.14017"	"2041.14038"	"-0.10"	"-0.00007"	"16/150"	"16"	"150"	"5811209.51251221"	"HCD"	"MS2"	"0.9051858"	"131.4"	"100.000"	"76.2889"	"25538"	"25538"	"25521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"214.9"	""	"202.7"	""	"205.4"	""	"171.9"	""	"221.2"	"235.2"	""	"1108"	"44"	"37.000"	"30.000"	"0.00247462710051634"	"18"	"0"	"8.289E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTTEQVTAMLLSK"	"[R].nFTTEQVTAMLLSk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"681.05176"	"2041.14072"	"2041.14038"	"0.16"	"0.00011"	"13/150"	"13"	"150"	"5938538.01672363"	"HCD"	"MS2"	"9.0201"	"128.4"	"100.000"	"76.2370"	"25568"	"25568"	"25551"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"218.9"	""	"205.4"	""	"186.8"	""	"140.7"	"2.3"	"220.7"	"239.6"	""	"1106"	"53"	"37.000"	"30.000"	"0.000301109967021859"	"20"	"0"	"8.626E-06"	"1.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSGIIPMEFVNK"	"[K].aFDSGIIPmEFVNk.[M]"	"N-Term(TMT6plex); M9(Oxidation); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"1021.55408"	"2042.10088"	"2042.10327"	"-1.17"	"-0.00120"	"6/120"	"6"	"120"	"140701.052001953"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"66.2753"	"21463"	"21463"	"21433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.9"	""	"12.2"	""	"18.6"	""	"17.0"	""	"14.4"	"14.8"	""	"1221"	"14"	"37.000"	"30.000"	"2.67107245199113"	"16"	"0.00103"	"0.01297"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSGIIPMEFVNK"	"[K].aFDSGIIPmEFVNk.[M]"	"N-Term(TMT6plex); M9(Oxidation); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"681.37299"	"2042.10440"	"2042.10327"	"0.56"	"0.00038"	"13/120"	"13"	"120"	"2575256.46533203"	"HCD"	"MS2"	"4.511311"	"79.9"	"100.000"	"66.2155"	"21438"	"21438"	"21417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.8"	""	"101.7"	""	"123.0"	""	"145.9"	""	"119.2"	"154.8"	""	"1216"	"40"	"37.000"	"30.000"	"0.00651483737584465"	"17"	"0"	"0.0001598"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSGIIPMEFVNK"	"[K].aFDSGIIPmEFVNk.[M]"	"N-Term(TMT6plex); M9(Oxidation); K14(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"681.37299"	"2042.10440"	"2042.10327"	"0.56"	"0.00038"	"14/120"	"14"	"120"	"5366225.20941162"	"HCD"	"MS2"	"54.42224"	"119.2"	"100.000"	"65.9651"	"21389"	"21389"	"21363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.6"	""	"156.8"	""	"169.2"	""	"230.2"	"0.9"	"214.0"	"193.0"	""	"1216"	"26"	"37.000"	"30.000"	"0.157363345241308"	"21"	"0.0001308"	"0.0002268"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYDLADQLHAAVGASR"	"[K].lLYDLADQLHAAVGASR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"681.37781"	"2042.11887"	"2042.12320"	"-2.12"	"-0.00144"	"14/170"	"14"	"170"	"414881.148681641"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"78.0181"	"26237"	"26237"	"26215"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.8"	""	"26.7"	""	"31.4"	""	"29.2"	""	"33.2"	"34.6"	""	"1185"	"37"	"37.000"	"30.000"	"0.0122092322361247"	"16"	"0"	"1.984E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPIYIITEFMAK"	"[K].eEPIYIITEFMAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"681.38013"	"2042.12583"	"2042.12842"	"-1.27"	"-0.00086"	"9/112"	"9"	"112"	"176288.023620605"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"94.6041"	"32627"	"32627"	"32619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.4"	""	"12.1"	""	"12.2"	""	"8.4"	""	"11.8"	"10.7"	""	"1125"	"30"	"37.000"	"30.000"	"0.0578259167696142"	"17"	"0.0001308"	"0.0002669"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPIYIITEFMAK"	"[K].eEPIYIITEFMAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"681.38013"	"2042.12583"	"2042.12842"	"-1.27"	"-0.00086"	"11/112"	"11"	"112"	"362531.128540039"	"HCD"	"MS2"	"10.03606"	"12.2"	"100.000"	"94.8612"	"32707"	"32707"	"32701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.1"	""	"17.3"	""	"16.0"	""	"14.5"	""	"23.0"	"29.7"	""	"1125"	"36"	"37.000"	"30.000"	"0.0128564932689868"	"17"	"0"	"5.694E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPIYIITEFMAK"	"[K].eEPIYIITEFMAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"681.38086"	"2042.12802"	"2042.12842"	"-0.19"	"-0.00013"	"11/112"	"11"	"112"	"339684.037658691"	"HCD"	"MS2"	"10.64067"	"10.9"	"100.000"	"94.7148"	"32641"	"32641"	"32633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.0"	""	"16.1"	""	"14.4"	""	"16.8"	""	"19.1"	"24.7"	""	"1124"	"39"	"37.000"	"30.000"	"0.00689820847911024"	"17"	"0"	"8.885E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPIYIITEFMAK"	"[K].eEPIYIITEFMAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.38092"	"2042.12821"	"2042.12842"	"-0.10"	"-0.00007"	"12/112"	"12"	"112"	"188737.574768066"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"94.4522"	"32553"	"32553"	"32548"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.4"	""	"7.5"	""	"11.1"	""	"11.5"	""	"11.5"	"12.0"	""	"1123"	"28"	"37.000"	"30.000"	"0.0936159309847422"	"14"	"0"	"6.561E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGIPVIITEQYPK"	"[R].iLGIPVIITEQYPk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6I7R3"	"Isochorismatase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Isoc1 PE=1 SV=1"	"Q6I7R3"	"Isochorismatase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Isoc1 PE=1 SV=1"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"681.42639"	"2042.26462"	"2042.26657"	"-0.95"	"-0.00065"	"13/112"	"13"	"112"	"1716724.15356445"	"HCD"	"MS2"	"28.33665"	"39.5"	"100.000"	"81.1536"	"27567"	"27567"	"27550"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.2"	""	"45.6"	""	"54.4"	""	"77.2"	""	"70.4"	"72.0"	""	"231"	"31"	"30.000"	"23.000"	"0.00936660021821186"	"15"	"0"	"1.937E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGIPVIITEQYPK"	"[R].iLGIPVIITEQYPk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6I7R3"	"Isochorismatase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Isoc1 PE=1 SV=1"	"Q6I7R3"	"Isochorismatase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Isoc1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.42706"	"2042.26664"	"2042.26657"	"0.03"	"0.00002"	"14/112"	"14"	"112"	"1868526.0423584"	"HCD"	"MS2"	"32.53835"	"43.8"	"100.000"	"81.1748"	"27524"	"27524"	"27504"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.9"	""	"57.2"	""	"68.7"	""	"80.5"	""	"74.0"	"75.4"	""	"226"	"31"	"30.000"	"23.000"	"0.00931276069964693"	"14"	"0"	"2.48E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGIPVIITEQYPK"	"[R].iLGIPVIITEQYPk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6I7R3"	"Isochorismatase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Isoc1 PE=1 SV=1"	"Q6I7R3"	"Isochorismatase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Isoc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1021.63708"	"2042.26689"	"2042.26657"	"0.16"	"0.00016"	"5/112"	"5"	"112"	"61269.9844360352"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"81.3521"	"27597"	"27597"	"27568"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.3"	""	""	""	"4.7"	""	"4.0"	""	"6.9"	"3.1"	""	"225"	"4"	"30.000"	"23.000"	"4.40709611746256"	"13"	"0.003137"	"0.06332"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLAEEWDYMTMK"	"[K].aPLAEEWDYMTMk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"681.68256"	"2043.03312"	"2043.03314"	"-0.01"	"-0.00001"	"12/108"	"12"	"108"	"845635.136535645"	"HCD"	"MS2"	"15.51167"	"38.1"	"100.000"	"70.7516"	"23282"	"23282"	"23251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.1"	""	"45.3"	""	"50.9"	""	"63.1"	"0.5"	"82.7"	"81.0"	""	"1094"	"29"	"37.000"	"30.000"	"0.0727758566634016"	"21"	"0.0001308"	"0.0002148"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLAEEWDYMTMK"	"[K].aPLAEEWDYMTMk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"681.68286"	"2043.03403"	"2043.03314"	"0.44"	"0.00030"	"12/108"	"12"	"108"	"904240.861083984"	"HCD"	"MS2"	"21.41034"	"40.4"	"100.000"	"70.6418"	"23289"	"23289"	"23258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.7"	""	"52.5"	""	"54.6"	""	"70.4"	""	"86.0"	"84.5"	""	"1110"	"31"	"37.000"	"30.000"	"0.0418112337872213"	"15"	"0.0001889"	"0.0004809"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADVDTILAHTMGDVR"	"[R].sLADVDTILAHTMGDVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"681.70935"	"2043.11350"	"2043.07421"	"19.23"	"0.01310"	"18/156"	"18"	"156"	"1251938.83544922"	"HCD"	"MS2"	"40.02501"	"72.0"	"100.000"	"71.8691"	"23790"	"23790"	"23769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.9"	""	"94.7"	""	"121.5"	""	"91.9"	"0.1"	"123.4"	"128.5"	""	"1106"	"23"	"37.000"	"30.000"	"0.258062637313802"	"15"	"0.0001889"	"0.0004256"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADVDTILAHTMGDVR"	"[R].sLADVDTILAHTMGDVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.70941"	"2043.11368"	"2043.07421"	"19.32"	"0.01316"	"17/156"	"17"	"156"	"1354988.68005371"	"HCD"	"MS2"	"13.34891"	"78.2"	"100.000"	"71.9535"	"23773"	"23773"	"23745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.3"	""	"96.1"	""	"124.7"	""	"103.5"	"0.4"	"125.2"	"146.9"	""	"1109"	"21"	"37.000"	"30.000"	"0.486296955324145"	"14"	"0.0001889"	"0.000674"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYAYNPLAGGLLTGK"	"[R].fYAYNPLAGGLLTGk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"681.72668"	"2043.16550"	"2043.16792"	"-1.18"	"-0.00081"	"11/132"	"11"	"132"	"674975.97064209"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"77.7345"	"26172"	"26172"	"26149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.6"	""	"31.8"	""	"37.1"	""	"48.0"	""	"51.1"	"62.2"	""	"868"	"20"	"36.000"	"29.000"	"0.394902360322397"	"17"	"0"	"0.0001561"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYAYNPLAGGLLTGK"	"[R].fYAYNPLAGGLLTGk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.72681"	"2043.16587"	"2043.16792"	"-1.00"	"-0.00068"	"9/132"	"9"	"132"	"616512.099182129"	"HCD"	"MS2"	"10.00277"	"25.5"	"100.000"	"77.7955"	"26146"	"26146"	"26121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.2"	""	"31.6"	""	"36.0"	""	"36.9"	""	"47.1"	"54.0"	""	"867"	"18"	"36.000"	"29.000"	"0.676066009975484"	"14"	"0.0001859"	"0.0003565"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYAYNPLAGGLLTGK"	"[R].fYAYNPLAGGLLTGk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.72699"	"2043.16642"	"2043.16792"	"-0.74"	"-0.00050"	"17/132"	"17"	"132"	"3251131.19689941"	"HCD"	"MS2"	"5.574207"	"88.6"	"100.000"	"77.4049"	"26038"	"26038"	"26021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.9"	""	"145.2"	""	"145.1"	""	"127.5"	""	"125.5"	"152.1"	""	"866"	"44"	"36.000"	"29.000"	"0.00157212797715454"	"15"	"0"	"8.209E-06"	"1.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYAYNPLAGGLLTGK"	"[R].fYAYNPLAGGLLTGk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1022.08710"	"2043.16692"	"2043.16792"	"-0.49"	"-0.00050"	"15/132"	"15"	"132"	"304919.037719727"	"HCD"	"MS2"	"10.84714"	"20.2"	"100.000"	"77.4300"	"26048"	"26048"	"26021"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.4"	""	"34.9"	""	"31.5"	""	"34.3"	""	"25.8"	"29.3"	""	"863"	"57"	"36.000"	"29.000"	"7.90643673253178E-05"	"16"	"0"	"2.127E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYAYNPLAGGLLTGK"	"[R].fYAYNPLAGGLLTGk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.72778"	"2043.16880"	"2043.16792"	"0.43"	"0.00029"	"17/132"	"17"	"132"	"3502151.37841797"	"HCD"	"MS2"	"2.085171"	"97.5"	"100.000"	"77.4680"	"26012"	"26012"	"25993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.2"	""	"145.7"	""	"160.4"	""	"156.1"	"0.1"	"138.5"	"156.3"	""	"863"	"46"	"36.000"	"29.000"	"0.00116407456509998"	"15"	"0"	"3.872E-06"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYAYNPLAGGLLTGK"	"[R].fYAYNPLAGGLLTGk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1022.08868"	"2043.17009"	"2043.16792"	"1.06"	"0.00109"	"14/132"	"14"	"132"	"360931.248046875"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"77.4820"	"26018"	"26018"	"25993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.4"	""	"37.0"	""	"53.4"	""	"35.9"	""	"33.3"	"33.5"	""	"851"	"39"	"36.000"	"29.000"	"0.00549413800922559"	"15"	"0.0001308"	"0.0002449"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFQANQENLPILK"	"[R].aVFQANQENLPILk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8082"	"0.0000"	"1"	"1"	"1"	"681.73785"	"2043.19901"	"2043.20028"	"-0.62"	"-0.00042"	"16/124"	"16"	"124"	"3550122.87658691"	"HCD"	"MS2"	"31.95911"	"118.8"	"100.000"	"60.7561"	"19262"	"19262"	"19235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.4"	""	"159.5"	""	"171.1"	""	"188.3"	"2.3"	"216.8"	"227.3"	""	"696"	"73"	"35.000"	"28.000"	"1.75622131552108E-06"	""	"0"	"2.451E-06"	"1.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFQANQENLPILK"	"[R].aVFQANQENLPILk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"681.73840"	"2043.20066"	"2043.20028"	"0.18"	"0.00012"	"12/124"	"12"	"124"	"2954950.22259521"	"HCD"	"MS2"	"14.86007"	"107.4"	"100.000"	"60.5419"	"19121"	"19121"	"19097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"138.1"	""	"156.3"	""	"147.6"	""	"185.9"	""	"205.1"	"184.7"	""	"671"	"40"	"35.000"	"28.000"	"0.00359494726907216"	"17"	"0"	"2.137E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEKPPHLAALVLAR"	"[R].gLEkPPHLAALVLAR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.57541"	"2043.27981"	"2043.28429"	"-2.19"	"-0.00112"	"7/134"	"7"	"134"	"4544831.76281738"	"HCD"	"MS2"	"0"	"69.6"	"100.000"	"46.3668"	"13361"	"13361"	"13336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.7"	""	"95.6"	""	"87.6"	""	"107.9"	"0.8"	"139.1"	"139.3"	""	"233"	"51"	"30.000"	"23.000"	"9.71238580081873E-05"	"16"	"0"	"3.796E-06"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKESGYPLIILSHGLGGFR"	"[K].TKESGYPLIILSHGLGGFR.[V]"	""	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"1"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"682.38281"	"2045.13388"	"2045.11784"	"7.85"	"0.00535"	"21/200"	"21"	"200"	"3859570.96392822"	"HCD"	"MS2"	"2.157253"	"60.7"	"100.000"	"68.6981"	"22495"	"22495"	"22474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.1"	""	"72.2"	""	"87.8"	""	"100.7"	""	"110.7"	"120.6"	"NoQuanLabels"	"1118"	"35"	"37.000"	"30.000"	"0.016047663453518"	"18"	"0"	"0.0001774"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKESGYPLIILSHGLGGFR"	"[K].TKESGYPLIILSHGLGGFR.[V]"	""	"1"	"1"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"P83006"	"Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Pafah2 PE=1 SV=2"	"1"	"3"	"3"	"0.1714"	"0.0000"	"1"	"1"	"1"	"682.38379"	"2045.13681"	"2045.11784"	"9.28"	"0.00633"	"21/200"	"21"	"200"	"3509699.97821045"	"HCD"	"MS2"	"15.68754"	"51.7"	"100.000"	"68.8633"	"22511"	"22511"	"22490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.5"	""	"66.1"	""	"76.5"	""	"80.2"	"1.7"	"99.0"	"93.3"	"NoQuanLabels"	"1110"	"35"	"37.000"	"30.000"	"0.0182933390258489"	"18"	"0.0001859"	"0.0003452"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVPENSEIVWSIK"	"[K].wVPENSEIVWSIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"1023.07709"	"2045.14690"	"2045.14718"	"-0.14"	"-0.00014"	"8/126"	"8"	"126"	"189859.804260254"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"73.9849"	"24654"	"24654"	"24623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.6"	""	"12.3"	""	"14.9"	""	"18.9"	""	"17.5"	"21.3"	""	"1055"	"16"	"37.000"	"30.000"	"1.31287223539396"	"17"	"0.000523"	"0.003137"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVPENSEIVWSIK"	"[K].wVPENSEIVWSIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"682.38727"	"2045.14725"	"2045.14718"	"0.03"	"0.00002"	"10/126"	"10"	"126"	"1959328.31573486"	"HCD"	"MS2"	"4.199898"	"55.5"	"100.000"	"73.8858"	"24613"	"24613"	"24591"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.3"	""	"69.3"	""	"76.4"	""	"103.7"	""	"100.7"	"99.4"	""	"1054"	"27"	"37.000"	"30.000"	"0.104908484964625"	"18"	"0.0001889"	"0.000413"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVPENSEIVWSIK"	"[K].wVPENSEIVWSIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"682.38733"	"2045.14743"	"2045.14718"	"0.12"	"0.00008"	"13/126"	"13"	"126"	"1887199.10601807"	"HCD"	"MS2"	"0"	"53.8"	"100.000"	"73.9366"	"24582"	"24582"	"24561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.3"	""	"70.5"	""	"68.8"	""	"93.2"	"1.4"	"102.5"	"101.1"	""	"1053"	"49"	"37.000"	"30.000"	"0.000713507225602821"	"21"	"0"	"1.787E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVPENSEIVWSIK"	"[K].wVPENSEIVWSIk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"1023.07874"	"2045.15019"	"2045.14718"	"1.47"	"0.00151"	"6/126"	"6"	"126"	"187763.079956055"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"74.0196"	"24616"	"24616"	"24593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.1"	""	"15.4"	""	"14.3"	""	"19.7"	""	"25.4"	"28.9"	""	"1048"	"15"	"37.000"	"30.000"	"1.63806558837295"	"18"	"0.0006037"	"0.005198"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWFVSNIDGTHIAK"	"[R].vWFVSNIDGTHIAk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.9077"	"0.0000"	"1"	"1"	"1"	"682.39160"	"2045.16025"	"2045.15842"	"0.90"	"0.00061"	"10/130"	"10"	"130"	"4670211.83355713"	"HCD"	"MS2"	"27.67697"	"144.8"	"100.000"	"57.7071"	"17967"	"17967"	"17947"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"219.0"	""	"204.5"	""	"207.8"	""	"230.7"	"2.1"	"236.0"	"270.5"	""	"954"	"65"	"36.000"	"29.000"	"1.44051697063176E-05"	"22"	"0"	"1.341E-06"	"1.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWFVSNIDGTHIAK"	"[R].vWFVSNIDGTHIAk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"682.39294"	"2045.16428"	"2045.15842"	"2.87"	"0.00195"	"16/130"	"16"	"130"	"3926147.81915283"	"HCD"	"MS2"	"20.6422"	"127.0"	"100.000"	"57.9173"	"18107"	"18107"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.0"	""	"170.0"	""	"192.5"	""	"199.6"	"1.7"	"203.0"	"243.6"	""	"891"	"70"	"36.000"	"29.000"	"4.27412981340348E-06"	"23"	"0"	"3.896E-06"	"1.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPMLQHYDPDFVR"	"[R].wLPMLQHYDPDFVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.68573"	"2046.04264"	"2046.04687"	"-2.07"	"-0.00141"	"12/124"	"12"	"124"	"1399320.0713501"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"69.9289"	"22946"	"22946"	"22928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.8"	""	"42.5"	""	"52.4"	""	"82.0"	"0.3"	"82.9"	"80.2"	""	"1106"	"11"	"37.000"	"30.000"	"4.3523632170139"	"13"	"0"	"0.0001633"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPMLQHYDPDFVR"	"[R].wLPMLQHYDPDFVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.68604"	"2046.04355"	"2046.04687"	"-1.62"	"-0.00111"	"15/124"	"15"	"124"	"1242934.50323486"	"HCD"	"MS2"	"43.24746"	"34.6"	"100.000"	"69.7843"	"22939"	"22939"	"22913"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.4"	""	"38.5"	""	"35.5"	""	"71.7"	"0.9"	"75.3"	"67.6"	""	"1099"	"27"	"37.000"	"30.000"	"0.111935462169929"	"14"	"0"	"2.112E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIQFVDWCPTGFK"	"[R].tIQFVDWcPTGFk.[V]"	"N-Term(TMT6plex); C8(Methylthio); K13(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"682.69043"	"2046.05674"	"2046.05930"	"-1.25"	"-0.00085"	"11/134"	"11"	"134"	"386020.147644043"	"HCD"	"MS2"	"9.190018"	"16.1"	"100.000"	"85.8478"	"29424"	"29424"	"29400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.0"	""	"28.3"	""	"26.3"	""	"22.1"	""	"26.5"	"31.5"	""	"1172"	"28"	"37.000"	"30.000"	"0.101134100470626"	"17"	"0.0001308"	"0.0002916"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIQFVDWCPTGFK"	"[R].tIQFVDWcPTGFk.[V]"	"N-Term(TMT6plex); C8(Methylthio); K13(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"682.69128"	"2046.05930"	"2046.05930"	"0.00"	"0.00000"	"10/134"	"10"	"134"	"292169.876708984"	"HCD"	"MS2"	"55.73872"	"12.0"	"100.000"	"85.9603"	"29521"	"29521"	"29497"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.9"	""	"16.6"	""	"18.0"	""	"17.1"	""	"23.2"	"22.0"	""	"1189"	"34"	"37.000"	"30.000"	"0.022446666750516"	"17"	"0"	"4.873E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIANPTAMLLSASNMLR"	"[R].nIANPTAMLLSASNMLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"1023.55304"	"2046.09880"	"2046.10373"	"-2.41"	"-0.00246"	"5/174"	"5"	"174"	"158305.209289551"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"81.8043"	"27832"	"27832"	"27806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.4"	""	"16.1"	""	"15.5"	""	"9.7"	""	"16.6"	"16.8"	""	"1306"	"16"	"38.000"	"31.000"	"1.55207670716605"	"17"	"0.000494"	"0.002643"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIANPTAMLLSASNMLR"	"[R].nIANPTAMLLSASNMLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"682.70563"	"2046.10233"	"2046.10373"	"-0.69"	"-0.00047"	"16/174"	"16"	"174"	"875704.934326172"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"81.7952"	"27828"	"27828"	"27806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.5"	""	"13.0"	""	"14.5"	""	"14.9"	"1.9"	"17.0"	"17.4"	""	"1333"	"48"	"38.000"	"31.000"	"0.000943626554341395"	"18"	"0"	"2.746E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIANPTAMLLSASNMLR"	"[R].nIANPTAMLLSASNMLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"1023.55560"	"2046.10393"	"2046.10373"	"0.10"	"0.00010"	"7/174"	"7"	"174"	"124448.681091309"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"81.7793"	"27771"	"27771"	"27744"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"9.4"	""	"10.8"	""	"6.7"	""	"12.3"	"12.1"	""	"1337"	"21"	"38.000"	"31.000"	"0.482060349833768"	"18"	"0.0001889"	"0.0009203"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIANPTAMLLSASNMLR"	"[R].nIANPTAMLLSASNMLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.70660"	"2046.10526"	"2046.10373"	"0.75"	"0.00051"	"18/174"	"18"	"174"	"981117.333190918"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"81.8027"	"27780"	"27780"	"27760"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.3"	""	"15.1"	""	"15.4"	""	"16.5"	""	"22.8"	"25.7"	""	"1336"	"53"	"38.000"	"31.000"	"0.000375644005227154"	"16"	"0"	"1.456E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FISDKDASVVGFFR"	"[K].fISDkDASVVGFFR.[D]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.71844"	"2046.14078"	"2046.14243"	"-0.81"	"-0.00055"	"11/132"	"11"	"132"	"5660382.39367676"	"HCD"	"MS2"	"18.14023"	"305.6"	"100.000"	"63.6068"	"20373"	"20373"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"613.8"	""	"748.8"	""	"374.1"	""	"509.9"	"0.2"	"253.4"	"372.7"	""	"1173"	"21"	"37.000"	"30.000"	"0.486707475147209"	"14"	"0"	"1.448E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FISDKDASVVGFFR"	"[K].fISDkDASVVGFFR.[D]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.71875"	"2046.14170"	"2046.14243"	"-0.36"	"-0.00025"	"7/132"	"7"	"132"	"6757572.53601074"	"HCD"	"MS2"	"7.015482"	"368.8"	"100.000"	"63.6443"	"20441"	"20441"	"20419"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"720.7"	""	"882.4"	""	"476.3"	""	"624.0"	""	"324.6"	"442.3"	""	"1162"	"2"	"37.000"	"30.000"	"38.6523703753212"	"13"	"0"	"0.0001171"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLIDVLQPLIAEHQAR"	"[K].tLIDVLQPLIAEHQAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"682.73303"	"2046.18454"	"2046.19089"	"-3.10"	"-0.00212"	"16/160"	"16"	"160"	"1069731.4630127"	"HCD"	"MS2"	"17.70301"	"20.5"	"100.000"	"72.8803"	"24203"	"24203"	"24175"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.6"	""	"28.4"	""	"27.2"	""	"29.8"	"0.6"	"41.2"	"37.8"	""	"800"	"49"	"36.000"	"29.000"	"0.000475400890974807"	"18"	"0"	"8.316E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLIDVLQPLIAEHQAR"	"[K].tLIDVLQPLIAEHQAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.73431"	"2046.18839"	"2046.19089"	"-1.22"	"-0.00083"	"15/160"	"15"	"160"	"3062760.19000244"	"HCD"	"MS2"	"3.50153"	"31.9"	"100.000"	"73.1664"	"24320"	"24320"	"24303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.5"	""	"33.7"	""	"44.8"	""	"53.0"	""	"64.1"	"59.6"	""	"779"	"39"	"35.000"	"28.000"	"0.00489223670859153"	"15"	"0"	"1.216E-05"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLIDVLQPLIAEHQAR"	"[K].tLIDVLQPLIAEHQAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"682.73438"	"2046.18857"	"2046.19089"	"-1.13"	"-0.00077"	"13/160"	"13"	"160"	"2363432.04089355"	"HCD"	"MS2"	"2.585847"	"27.2"	"100.000"	"72.9954"	"24198"	"24198"	"24177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.8"	""	"35.4"	""	"38.1"	""	"47.3"	""	"51.1"	"48.4"	""	"778"	"37"	"35.000"	"28.000"	"0.00765507766695962"	"21"	"0"	"7.767E-06"	"1.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPELLAVGVVDSMTK"	"[K].iPELLAVGVVDSmTk.[L]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.73486"	"2046.19004"	"2046.19209"	"-1.00"	"-0.00068"	"15/134"	"15"	"134"	"794449.372802734"	"HCD"	"MS2"	"0"	"29.3"	"100.000"	"75.5095"	"25276"	"25276"	"25247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.7"	""	"32.5"	""	"32.0"	""	"72.7"	""	"56.0"	"51.0"	""	"762"	"54"	"35.000"	"28.000"	"0.000161036742035195"	"16"	"0"	"1.602E-05"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLIDVLQPLIAEHQAR"	"[K].tLIDVLQPLIAEHQAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"682.73517"	"2046.19095"	"2046.19089"	"0.03"	"0.00002"	"15/160"	"15"	"160"	"1347810.26190186"	"HCD"	"MS2"	"2.699689"	"27.3"	"100.000"	"73.3092"	"24326"	"24326"	"24305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.2"	""	"28.6"	""	"34.8"	""	"47.5"	"1.0"	"54.3"	"56.4"	""	"757"	"38"	"35.000"	"28.000"	"0.00671530718516928"	"20"	"0"	"6.292E-06"	"1.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPELLAVGVVDSMTK"	"[K].iPELLAVGVVDSmTk.[L]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.73627"	"2046.19425"	"2046.19209"	"1.06"	"0.00072"	"14/134"	"14"	"134"	"769730.060546875"	"HCD"	"MS2"	"8.480935"	"28.4"	"100.000"	"75.5216"	"25229"	"25229"	"25201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.1"	""	"31.1"	""	"29.5"	""	"71.4"	"1.1"	"45.9"	"50.9"	""	"756"	"53"	"35.000"	"28.000"	"0.000210131809248213"	"16"	"0"	"6.268E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSVPESTPFTAVLK"	"[K].vLSVPESTPFTAVLk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1023.61487"	"2046.22246"	"2046.22510"	"-1.29"	"-0.00132"	"10/128"	"10"	"128"	"161029.967712402"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"74.2500"	"24762"	"24762"	"24735"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.7"	""	"7.7"	""	"12.3"	""	"16.8"	""	"14.6"	"13.4"	""	"556"	"33"	"34.000"	"27.000"	"0.0148951470788709"	"15"	"0.0001889"	"0.0006379"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSVPESTPFTAVLK"	"[K].vLSVPESTPFTAVLk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1023.61560"	"2046.22392"	"2046.22510"	"-0.57"	"-0.00059"	"8/128"	"8"	"128"	"196962.822937012"	"HCD"	"MS2"	"21.31097"	"11.3"	"100.000"	"74.2296"	"24702"	"24702"	"24673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.0"	""	"10.6"	""	"13.9"	""	"21.2"	""	"25.3"	"20.0"	""	"560"	"19"	"34.000"	"27.000"	"0.390083904824685"	"14"	"0.0001889"	"0.000867"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSVPESTPFTAVLK"	"[K].vLSVPESTPFTAVLk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"682.74628"	"2046.22428"	"2046.22510"	"-0.40"	"-0.00027"	"11/128"	"11"	"128"	"3949656.45556641"	"HCD"	"MS2"	"11.86622"	"101.7"	"100.000"	"74.1699"	"24677"	"24677"	"24657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.7"	""	"134.2"	""	"140.8"	""	"188.7"	""	"174.1"	"190.9"	""	"560"	"24"	"34.000"	"27.000"	"0.100498141700601"	"15"	"0.0001889"	"0.0006342"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSVPESTPFTAVLK"	"[K].vLSVPESTPFTAVLk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"682.74640"	"2046.22464"	"2046.22510"	"-0.22"	"-0.00015"	"15/128"	"15"	"128"	"4040760.69671631"	"HCD"	"MS2"	"10.50814"	"103.1"	"100.000"	"74.1900"	"24737"	"24737"	"24719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.8"	""	"122.9"	""	"140.1"	""	"185.4"	""	"182.9"	"186.8"	""	"560"	"37"	"34.000"	"27.000"	"0.00523790999302423"	"15"	"0.0002277"	"0.001194"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDPGLVDQLVK"	"[R].fkDPGLVDQLVk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"1"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"682.75647"	"2046.25486"	"2046.25662"	"-0.86"	"-0.00059"	"9/118"	"9"	"118"	"5657598.60028076"	"HCD"	"MS2"	"4.376942"	"297.1"	"100.000"	"55.9159"	"17289"	"17289"	"17269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"473.5"	""	"414.0"	""	"447.0"	""	"442.4"	""	"524.6"	"512.3"	""	"380"	"23"	"32.000"	"25.000"	"0.100404597837284"	"16"	"0"	"4.343E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKDPGLVDQLVK"	"[R].fkDPGLVDQLVk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"Q6P799"	"Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Sars PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"682.75696"	"2046.25632"	"2046.25662"	"-0.15"	"-0.00010"	"10/118"	"10"	"118"	"6226971.28643799"	"HCD"	"MS2"	"17.50439"	"322.6"	"100.000"	"55.7096"	"17151"	"17151"	"17131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"540.8"	""	"446.4"	""	"501.2"	""	"470.5"	""	"554.0"	"542.8"	""	"375"	"40"	"32.000"	"25.000"	"0.00190108384825627"	"15"	"0"	"4.62E-06"	"1.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPMLQHYDPDFVR"	"[R].wLPMLqHYDPDFVR.[A]"	"N-Term(TMT6plex); Q6(Deamidated)"	"1"	"1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"683.01947"	"2047.04386"	"2047.03088"	"6.34"	"0.00432"	"4/124"	"4"	"124"	"864322.903686523"	"HCD"	"MS2"	"29.22327"	"37.9"	"100.000"	"69.9243"	"22996"	"22996"	"22970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.0"	""	"42.7"	""	"49.1"	""	"73.6"	"0.2"	"76.8"	"75.8"	""	"1161"	"1"	"37.000"	"30.000"	"41.2859444675758"	"13"	"0.007034"	"0.2635"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFGDALLMEPLEK"	"[R].lIFGDALLMEPLEk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10687"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus OX=10116 GN=Plcb1 PE=1 SV=1"	"P10687"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus OX=10116 GN=Plcb1 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"683.06720"	"2047.18705"	"2047.19136"	"-2.11"	"-0.00144"	"9/120"	"9"	"120"	"158067.309143066"	"HCD"	"MS2"	"18.21204"	"6.9"	"100.000"	"90.7642"	"31342"	"31342"	"31332"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"11.9"	""	"12.0"	""	"8.1"	""	"10.4"	"14.1"	""	"825"	"14"	"36.000"	"29.000"	"1.76369690537529"	"15"	"0.000523"	"0.003027"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIFGDALLMEPLEK"	"[R].lIFGDALLMEPLEk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10687"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus OX=10116 GN=Plcb1 PE=1 SV=1"	"P10687"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus OX=10116 GN=Plcb1 PE=1 SV=1"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"683.06885"	"2047.19199"	"2047.19136"	"0.31"	"0.00021"	"11/120"	"11"	"120"	"168290.557617188"	"HCD"	"MS2"	"20.92981"	"6.3"	"100.000"	"90.6436"	"31273"	"31273"	"31262"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.7"	""	"10.8"	""	"13.5"	""	"6.0"	""	"10.4"	"11.1"	""	"781"	"36"	"35.000"	"28.000"	"0.0090702871897745"	"26"	"0.0001859"	"0.0003266"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADSLFPVVSAASIIAK"	"[K].aDSLFPVVSAASIIAk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5U209"	"Ribonuclease H2 subunit A OS=Rattus norvegicus OX=10116 GN=Rnaseh2a PE=2 SV=1"	"Q5U209"	"Ribonuclease H2 subunit A OS=Rattus norvegicus OX=10116 GN=Rnaseh2a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.07831"	"2047.22037"	"2047.22035"	"0.01"	"0.00001"	"5/140"	"5"	"140"	"375738.250244141"	"HCD"	"MS2"	"56.43126"	"17.7"	"100.000"	"82.5174"	"28123"	"28123"	"28094"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.2"	""	"26.0"	""	"26.3"	""	"30.3"	""	"36.6"	"29.0"	""	"592"	"7"	"34.000"	"27.000"	"5.37392636180848"	"13"	"0.0001889"	"0.0007166"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFESFIESVPLFK"	"[K].mFESFIESVPLFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"683.37683"	"2048.11594"	"2048.11786"	"-0.94"	"-0.00064"	"10/106"	"10"	"106"	"515667.037719727"	"HCD"	"MS2"	"9.289547"	"17.0"	"100.000"	"86.9254"	"29911"	"29911"	"29894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.5"	""	"22.6"	""	"24.0"	""	"42.0"	""	"29.0"	"27.6"	""	"1276"	"22"	"38.000"	"31.000"	"0.365443867768959"	"19"	"0.0001889"	"0.000702"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFESFIESVPLFK"	"[K].mFESFIESVPLFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"683.37708"	"2048.11667"	"2048.11786"	"-0.58"	"-0.00040"	"10/106"	"10"	"106"	"460979.660339355"	"HCD"	"MS2"	"9.517135"	"15.2"	"100.000"	"87.2299"	"30034"	"30034"	"30018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.3"	""	"18.0"	""	"24.7"	""	"37.0"	""	"24.6"	"26.0"	""	"1285"	"25"	"38.000"	"31.000"	"0.196731150614626"	"15"	"0.0002277"	"0.001128"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFESFIESVPLFK"	"[K].mFESFIESVPLFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"683.37720"	"2048.11704"	"2048.11786"	"-0.40"	"-0.00027"	"11/106"	"11"	"106"	"635501.114685059"	"HCD"	"MS2"	"11.17109"	"21.2"	"100.000"	"86.8784"	"29840"	"29840"	"29825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.6"	""	"30.2"	""	"30.2"	""	"49.0"	""	"37.3"	"34.6"	""	"1277"	"29"	"38.000"	"31.000"	"0.0751901414093036"	"16"	"0"	"0.0001576"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFESFIESVPLFK"	"[K].mFESFIESVPLFk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"683.37750"	"2048.11795"	"2048.11786"	"0.05"	"0.00003"	"12/106"	"12"	"106"	"422728.121887207"	"HCD"	"MS2"	"5.861036"	"13.9"	"100.000"	"87.1597"	"29954"	"29954"	"29943"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"16.2"	""	"19.9"	""	"34.8"	""	"26.4"	"26.5"	""	"1302"	"24"	"38.000"	"31.000"	"0.239651961841288"	"15"	"0.0001889"	"0.0004702"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDGAVGAQWLAEFK"	"[R].vVDGAVGAQWLAEFk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"683.38947"	"2048.15384"	"2048.15808"	"-2.07"	"-0.00141"	"10/144"	"10"	"144"	"482715.472045898"	"HCD"	"MS2"	"17.44749"	"22.1"	"100.000"	"78.7047"	"26568"	"26568"	"26543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.2"	""	"26.5"	""	"26.8"	""	"44.7"	""	"42.7"	"45.5"	""	"1063"	"5"	"37.000"	"30.000"	"16.8075057637949"	"17"	"0.0001308"	"0.0003131"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDGAVGAQWLAEFK"	"[R].vVDGAVGAQWLAEFk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"1024.58154"	"2048.15581"	"2048.15808"	"-1.11"	"-0.00114"	"5/144"	"5"	"144"	"103087.339782715"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"78.4424"	"26410"	"26410"	"26385"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"8.9"	""	"9.5"	""	"16.4"	""	"12.8"	"11.7"	""	"1059"	"18"	"37.000"	"30.000"	"0.886882252855998"	"15"	"0.0008731"	"0.00914"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDGAVGAQWLAEFK"	"[R].vVDGAVGAQWLAEFk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"683.39020"	"2048.15604"	"2048.15808"	"-1.00"	"-0.00068"	"14/144"	"14"	"144"	"449604.055847168"	"HCD"	"MS2"	"5.160204"	"22.1"	"100.000"	"78.7171"	"26522"	"26522"	"26497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.9"	""	"23.8"	""	"27.5"	""	"43.7"	""	"46.3"	"41.0"	""	"1058"	"22"	"37.000"	"30.000"	"0.355185863197828"	"21"	"0"	"0.0001178"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDGAVGAQWLAEFK"	"[R].vVDGAVGAQWLAEFk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"1024.58203"	"2048.15679"	"2048.15808"	"-0.63"	"-0.00065"	"10/144"	"10"	"144"	"87760.7932739258"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"78.4325"	"26457"	"26457"	"26431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"5.4"	""	"5.7"	""	"11.9"	""	"12.5"	"15.1"	""	"1056"	"30"	"37.000"	"30.000"	"0.0551612275748583"	"24"	"0.0001889"	"0.000811"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDGAVGAQWLAEFK"	"[R].vVDGAVGAQWLAEFk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"0.9057"	"0.0000"	"1"	"1"	"1"	"683.39050"	"2048.15696"	"2048.15808"	"-0.55"	"-0.00038"	"15/144"	"15"	"144"	"1249928.86871338"	"HCD"	"MS2"	"24.19209"	"46.7"	"100.000"	"78.3747"	"26433"	"26433"	"26415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.9"	""	"51.4"	""	"67.2"	""	"79.3"	""	"105.9"	"91.4"	""	"1061"	"53"	"37.000"	"30.000"	"0.00024416611228491"	"21"	"0"	"1.163E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDGAVGAQWLAEFK"	"[R].vVDGAVGAQWLAEFk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"683.39056"	"2048.15714"	"2048.15808"	"-0.46"	"-0.00031"	"13/144"	"13"	"144"	"1118556.85015869"	"HCD"	"MS2"	"28.31846"	"43.0"	"100.000"	"78.3940"	"26390"	"26390"	"26369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.8"	""	"47.0"	""	"59.3"	""	"73.9"	""	"83.7"	"91.3"	""	"1058"	"43"	"37.000"	"30.000"	"0.00271929091687103"	"17"	"0"	"8.485E-06"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIVDAVGFGDQINK"	"[K].lTIVDAVGFGDQINk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"683.39972"	"2048.18460"	"2048.17921"	"2.63"	"0.00180"	"12/136"	"12"	"136"	"593156.851745605"	"HCD"	"MS2"	"21.94143"	"27.9"	"100.000"	"71.2957"	"23504"	"23504"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.2"	""	"37.6"	""	"33.7"	""	"55.7"	"2.5"	"43.9"	"49.7"	""	"844"	"36"	"36.000"	"29.000"	"0.0105514574263589"	"17"	"0"	"8.344E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQAQLDSGLVLFSHR"	"[R].fTQAqLDSGLVLFSHR.[G]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.0312"	"0.0000"	"1"	"1"	"1"	"683.71063"	"2049.11734"	"2049.09666"	"10.10"	"0.00690"	"20/170"	"20"	"170"	"2918821.71990967"	"HCD"	"MS2"	"16.82326"	"69.2"	"100.000"	"63.4182"	"20349"	"20349"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.4"	""	"80.5"	""	"90.1"	""	"121.3"	"1.4"	"144.6"	"131.3"	""	"1304"	"32"	"38.000"	"31.000"	"0.0370039082726372"	"15"	"0"	"8.974E-06"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQAQLDSGLVLFSHR"	"[R].fTqAQLDSGLVLFSHR.[G]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0312"	"2"	"2"	"2"	"683.71063"	"2049.11734"	"2049.09666"	"10.10"	"0.00690"	"20/170"	"20"	"170"	"2918821.71990967"	"HCD"	"MS2"	"16.82326"	"69.2"	"100.000"	"63.4182"	"20349"	"20349"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.4"	""	"80.5"	""	"90.1"	""	"121.3"	"1.4"	"144.6"	"131.3"	""	"1304"	"31"	"38.000"	"31.000"	"0.0522694097328766"	"15"	"0"	"1.267E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPQAETFEQLSSK"	"[K].lLPQAETFEQLSSk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.72571"	"2049.16257"	"2049.16323"	"-0.32"	"-0.00022"	"12/138"	"12"	"138"	"3520088.30786133"	"HCD"	"MS2"	"14.40133"	"118.5"	"100.000"	"64.6942"	"20817"	"20817"	"20793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.8"	""	"182.3"	""	"164.3"	""	"178.1"	""	"206.8"	"192.9"	""	"1042"	"24"	"37.000"	"30.000"	"0.191354078559502"	"14"	"0"	"7.008E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIVDAVGFGDQINK"	"[K].lTIVDAVGFGDqINk.[D]"	"N-Term(TMT6plex); Q12(Deamidated); K15(TMT6plex)"	"1"	"1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"3"	"3"	"0.1071"	"0.0000"	"1"	"1"	"1"	"683.73193"	"2049.18125"	"2049.16323"	"8.79"	"0.00601"	"8/136"	"8"	"136"	"524624.07800293"	"HCD"	"MS2"	"44.07133"	"29.7"	"100.000"	"71.3257"	"23516"	"23516"	"23491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.4"	""	"48.6"	""	"43.3"	""	"47.3"	""	"54.9"	"53.3"	""	"894"	"28"	"36.000"	"29.000"	"0.077322791256915"	"17"	"0.0001889"	"0.0004387"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVTPSTTQVVGILK"	"[K].fTVTPSTTQVVGILk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.74927"	"2049.23325"	"2049.23600"	"-1.34"	"-0.00092"	"14/136"	"14"	"136"	"9801216.20294189"	"HCD"	"MS2"	"3.659732"	"205.5"	"100.000"	"67.5940"	"22044"	"22044"	"22026"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"291.5"	""	"318.0"	""	"319.9"	""	"300.7"	"0.6"	"349.8"	"364.3"	""	"442"	"60"	"33.000"	"26.000"	"2.08637453659189E-05"	"16"	"0"	"1.286E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVTPSTTQVVGILK"	"[K].fTVTPSTTQVVGILk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1025.12073"	"2049.23418"	"2049.23600"	"-0.89"	"-0.00091"	"14/136"	"14"	"136"	"716773.038391113"	"HCD"	"MS2"	"0"	"44.9"	"100.000"	"67.5733"	"22036"	"22036"	"22010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.0"	""	"59.0"	""	"76.3"	""	"70.6"	"1.6"	"73.2"	"76.5"	""	"437"	"54"	"33.000"	"26.000"	"9.62612376761818E-05"	"16"	"0.0001308"	"0.0002922"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVTPSTTQVVGILK"	"[K].fTVTPSTTQVVGILk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.75006"	"2049.23563"	"2049.23600"	"-0.18"	"-0.00012"	"16/136"	"16"	"136"	"9220940.78253174"	"HCD"	"MS2"	"1.211811"	"210.6"	"100.000"	"67.7597"	"22061"	"22061"	"22042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"295.9"	"3.5"	"335.0"	""	"336.8"	""	"301.2"	""	"365.5"	"357.1"	""	"437"	"50"	"33.000"	"26.000"	"0.000226178563419437"	"16"	"0"	"1.124E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTVTPSTTQVVGILK"	"[K].fTVTPSTTQVVGILk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1025.12183"	"2049.23638"	"2049.23600"	"0.18"	"0.00019"	"20/136"	"20"	"136"	"566262.969360352"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"67.7391"	"22053"	"22053"	"22029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.9"	""	"65.6"	""	"57.9"	""	"56.7"	""	"61.9"	"60.8"	""	"432"	"92"	"33.000"	"26.000"	"1.2660584353503E-08"	"18"	"0"	"1.098E-05"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].aHFSVmGDILSSAIk.[N]"	"N-Term(TMT6plex); M6(Oxidation); K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.05121"	"2050.13907"	"2050.14072"	"-0.80"	"-0.00055"	"17/128"	"17"	"128"	"6868304.02484131"	"HCD"	"MS2"	"13.71358"	"191.9"	"100.000"	"50.6645"	"15109"	"15109"	"15090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"202.9"	""	"187.4"	""	"189.0"	""	"547.3"	"6.2"	"344.3"	"343.1"	""	"1147"	"55"	"37.000"	"30.000"	"0.000177228443054654"	"16"	"0"	"3.192E-06"	"1.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHFSVMGDILSSAIK"	"[R].aHFSVmGDILSSAIk.[N]"	"N-Term(TMT6plex); M6(Oxidation); K15(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.05145"	"2050.13980"	"2050.14072"	"-0.45"	"-0.00030"	"12/128"	"12"	"128"	"7959072.88189697"	"HCD"	"MS2"	"16.15885"	"214.7"	"100.000"	"50.9498"	"15276"	"15276"	"15254"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.9"	""	"227.9"	""	"237.2"	""	"601.7"	""	"391.1"	"361.5"	""	"1143"	"40"	"37.000"	"30.000"	"0.00584811945088452"	"15"	"0"	"9.107E-06"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFGVPSVFTPAIDTK"	"[R].lFGVPSVFTPAIDTk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3B7U4"	"Cytoplasmic tRNA 2-thiolation protein 2 OS=Rattus norvegicus OX=10116 GN=Ctu2 PE=2 SV=2"	"Q3B7U4"	"Cytoplasmic tRNA 2-thiolation protein 2 OS=Rattus norvegicus OX=10116 GN=Ctu2 PE=2 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"684.07068"	"2050.19748"	"2050.19888"	"-0.68"	"-0.00047"	"13/128"	"13"	"128"	"485640.698425293"	"HCD"	"MS2"	"15.64335"	"16.2"	"100.000"	"80.9894"	"27500"	"27500"	"27470"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.6"	""	"22.0"	""	"20.3"	""	"25.3"	""	"30.9"	"31.4"	""	"704"	"46"	"35.000"	"28.000"	"0.000802680409344147"	"19"	"7.476E-05"	"0.0002042"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFGVPSVFTPAIDTK"	"[R].lFGVPSVFTPAIDTk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q3B7U4"	"Cytoplasmic tRNA 2-thiolation protein 2 OS=Rattus norvegicus OX=10116 GN=Ctu2 PE=2 SV=2"	"Q3B7U4"	"Cytoplasmic tRNA 2-thiolation protein 2 OS=Rattus norvegicus OX=10116 GN=Ctu2 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.07098"	"2050.19840"	"2050.19888"	"-0.24"	"-0.00016"	"11/128"	"11"	"128"	"336502.916442871"	"HCD"	"MS2"	"22.94414"	"17.7"	"100.000"	"81.1423"	"27511"	"27511"	"27488"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.7"	""	"22.1"	""	"27.6"	""	"27.4"	""	"35.5"	"37.2"	""	"694"	"21"	"35.000"	"28.000"	"0.3071351166113"	"14"	"0.0001889"	"0.0006072"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDEILEASDGIMVAR"	"[R].rFDEILEASDGIMVAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"1"	"3"	"3"	"0.6140"	"0.0000"	"1"	"1"	"1"	"684.36432"	"2051.07840"	"2051.07929"	"-0.43"	"-0.00030"	"13/164"	"13"	"164"	"1640239.46868896"	"HCD"	"MS2"	"27.62277"	"45.0"	"100.000"	"61.4705"	"19554"	"19554"	"19523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.5"	""	"67.6"	""	"60.0"	""	"74.3"	""	"82.0"	"82.1"	""	"1302"	"57"	"38.000"	"31.000"	"0.00012635167063129"	""	"0"	"1.7E-07"	"1.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDEILEASDGIMVAR"	"[R].rFDEILEASDGIMVAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"1"	"3"	"3"	"0.6182"	"0.0000"	"1"	"1"	"1"	"684.36438"	"2051.07859"	"2051.07929"	"-0.34"	"-0.00023"	"13/164"	"13"	"164"	"1387583.45507813"	"HCD"	"MS2"	"13.43453"	"40.3"	"100.000"	"61.3809"	"19464"	"19464"	"19433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.7"	""	"51.5"	""	"63.4"	""	"52.5"	"1.0"	"78.9"	"84.5"	""	"1310"	"55"	"38.000"	"31.000"	"0.000202880964098686"	""	"0"	"9.631E-07"	"1.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEIWDGFPEVGPHIGR"	"[R].lEIWDGFPEVGPHIGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QWJ9"	"Neuropilin-1 OS=Rattus norvegicus OX=10116 GN=Nrp1 PE=1 SV=1"	"Q9QWJ9"	"Neuropilin-1 OS=Rattus norvegicus OX=10116 GN=Nrp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"684.36823"	"2051.09012"	"2051.09118"	"-0.51"	"-0.00035"	"11/134"	"11"	"134"	"562473.816223145"	"HCD"	"MS2"	"11.71516"	"24.9"	"100.000"	"69.9634"	"23012"	"23012"	"22986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.3"	""	"29.1"	""	"34.4"	""	"40.8"	"1.3"	"47.1"	"52.1"	""	"1334"	"30"	"38.000"	"31.000"	"0.0631140186630983"	"18"	"0"	"2.948E-05"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFEDELVPLFEK"	"[R].dLFEDELVPLFEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.71411"	"2052.12778"	"2052.13053"	"-1.34"	"-0.00092"	"12/118"	"12"	"118"	"212865.474182129"	"HCD"	"MS2"	"21.15792"	"8.8"	"100.000"	"90.0965"	"31107"	"31107"	"31097"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.5"	""	"8.6"	""	"13.4"	""	"16.9"	"1.5"	"11.6"	"17.6"	""	"1144"	"23"	"37.000"	"30.000"	"0.2866790976348"	"14"	"0.0001308"	"0.0002064"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFEDELVPLFEK"	"[R].dLFEDELVPLFEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.71448"	"2052.12888"	"2052.13053"	"-0.80"	"-0.00055"	"9/118"	"9"	"118"	"215565.745361328"	"HCD"	"MS2"	"47.96458"	"11.5"	"100.000"	"90.2609"	"31133"	"31133"	"31124"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.0"	""	"17.4"	""	"18.3"	""	"17.9"	""	"22.4"	"20.2"	""	"1140"	"12"	"37.000"	"30.000"	"3.49039723283121"	"13"	"0.0008731"	"0.008965"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFEDELVPLFEK"	"[R].dLFEDELVPLFEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"684.71454"	"2052.12906"	"2052.13053"	"-0.72"	"-0.00049"	"11/118"	"11"	"118"	"219006.521789551"	"HCD"	"MS2"	"48.03321"	"10.3"	"100.000"	"90.3640"	"31201"	"31201"	"31194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.0"	""	"13.6"	""	"18.6"	""	"12.8"	""	"21.7"	"17.2"	""	"1143"	"16"	"37.000"	"30.000"	"1.57404170395776"	"18"	"0.0003571"	"0.001533"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFEDELVPLFEK"	"[R].dLFEDELVPLFEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1026.56824"	"2052.12920"	"2052.13053"	"-0.65"	"-0.00067"	"5/118"	"5"	"118"	"85515.9288330078"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"89.9930"	"31035"	"31035"	"31025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"4.7"	""	"10.5"	""	"12.4"	""	"8.6"	"10.6"	""	"1143"	"14"	"37.000"	"30.000"	"2.3934052246489"	"13"	"0.00175"	"0.02427"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFEDELVPLFEK"	"[R].dLFEDELVPLFEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"1026.56836"	"2052.12944"	"2052.13053"	"-0.53"	"-0.00054"	"6/118"	"6"	"118"	"66677.9971313477"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"90.1384"	"31123"	"31123"	"31110"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"4.3"	""	"5.0"	""	"7.7"	""	"9.7"	"7.3"	""	"1139"	"25"	"37.000"	"30.000"	"0.169626510655992"	"16"	"0.0006037"	"0.003886"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFEDELVPLFEK"	"[R].dLFEDELVPLFEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"684.71472"	"2052.12961"	"2052.13053"	"-0.45"	"-0.00031"	"11/118"	"11"	"118"	"225402.937255859"	"HCD"	"MS2"	"36.16392"	"9.8"	"100.000"	"89.9580"	"31022"	"31022"	"31005"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.8"	""	"10.1"	""	"16.1"	""	"20.0"	""	"18.0"	"18.4"	""	"1138"	"42"	"37.000"	"30.000"	"0.00358189018045746"	"24"	"0"	"8.9E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGIMVPAPIQDLEALR"	"[R].lSGIMVPAPIQDLEALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"1026.58911"	"2052.17095"	"2052.17246"	"-0.74"	"-0.00076"	"8/164"	"8"	"164"	"69113.239440918"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"85.8881"	"29492"	"29492"	"29467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"4.7"	""	"2.7"	""	"2.2"	""	"2.4"	"3.9"	""	"889"	"12"	"36.000"	"29.000"	"2.86993304805904"	"16"	"0.0006037"	"0.003686"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGIMVPAPIQDLEALR"	"[R].lSGIMVPAPIQDLEALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"1026.58911"	"2052.17095"	"2052.17246"	"-0.74"	"-0.00076"	"8/164"	"8"	"164"	"89049.393737793"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"85.8220"	"29414"	"29414"	"29384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.9"	""	"6.2"	""	"3.1"	""	"3.3"	""	"6.2"	"4.9"	""	"889"	"8"	"36.000"	"29.000"	"6.380750531257"	"16"	"0.0006737"	"0.006454"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGLFSGDPNWFPK"	"[R].dDGLFSGDPNWFPk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"685.01831"	"2053.04038"	"2053.04311"	"-1.33"	"-0.00091"	"10/126"	"10"	"126"	"3089840.92962646"	"HCD"	"MS2"	"9.243521"	"98.3"	"100.000"	"73.3828"	"24356"	"24356"	"24337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.3"	""	"136.9"	""	"135.1"	""	"172.9"	""	"173.1"	"175.9"	""	"1112"	"37"	"37.000"	"30.000"	"0.0119144717422275"	"16"	"0"	"5.73E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGLFSGDPNWFPK"	"[R].dDGLFSGDPNWFPk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"1027.02417"	"2053.04106"	"2053.04311"	"-1.00"	"-0.00102"	"9/126"	"9"	"126"	"362658.575744629"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"73.7291"	"24549"	"24549"	"24527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.1"	""	"30.7"	""	"35.0"	""	"43.0"	""	"47.3"	"47.9"	""	"1106"	"43"	"37.000"	"30.000"	"0.00305298823922259"	"18"	"0"	"0.0001263"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGLFSGDPNWFPK"	"[R].dDGLFSGDPNWFPk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"4"	"4"	"0.8621"	"0.0000"	"1"	"1"	"1"	"514.01575"	"2053.04116"	"2053.04311"	"-0.95"	"-0.00049"	"6/126"	"6"	"126"	"1281542.39550781"	"HCD"	"MS2"	"6.107235"	"26.4"	"100.000"	"73.5377"	"24471"	"24471"	"24447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.7"	""	"30.8"	""	"38.6"	""	"46.1"	""	"53.2"	"49.1"	""	"1112"	"29"	"37.000"	"30.000"	"0.0632520770917827"	"19"	"0.0001308"	"0.0002376"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGLFSGDPNWFPK"	"[R].dDGLFSGDPNWFPk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"685.01880"	"2053.04184"	"2053.04311"	"-0.62"	"-0.00042"	"10/126"	"10"	"126"	"2461836.6494751"	"HCD"	"MS2"	"31.10202"	"78.7"	"100.000"	"73.3416"	"24391"	"24391"	"24367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.7"	""	"108.1"	""	"111.8"	""	"128.1"	"0.6"	"138.6"	"142.5"	""	"1119"	"48"	"37.000"	"30.000"	"0.000967832252980849"	"23"	"0"	"4.07E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGLFSGDPNWFPK"	"[R].dDGLFSGDPNWFPk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"1027.02478"	"2053.04228"	"2053.04311"	"-0.40"	"-0.00041"	"9/126"	"9"	"126"	"721712.18548584"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"73.3946"	"24413"	"24413"	"24383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.6"	""	"68.7"	""	"65.6"	""	"81.9"	"0.8"	"83.0"	"80.8"	""	"1117"	"54"	"37.000"	"30.000"	"0.000225955635513022"	"18"	"0"	"0.0001294"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGLFSGDPNWFPK"	"[R].dDGLFSGDPNWFPk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.01605"	"2053.04238"	"2053.04311"	"-0.36"	"-0.00018"	"6/126"	"6"	"126"	"976566.137695313"	"HCD"	"MS2"	"18.47593"	"20.6"	"100.000"	"73.6344"	"24459"	"24459"	"24433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.7"	""	"26.7"	""	"24.8"	""	"33.5"	"2.4"	"43.3"	"37.8"	""	"1119"	"29"	"37.000"	"30.000"	"0.0691512589012204"	"14"	"0.0001308"	"0.000293"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGLFSGDPNWFPK"	"[R].dDGLFSGDPNWFPk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"685.01917"	"2053.04294"	"2053.04311"	"-0.08"	"-0.00006"	"10/126"	"10"	"126"	"5783422.84906006"	"HCD"	"MS2"	"0.218447"	"143.3"	"94.775"	"73.6369"	"24512"	"24512"	"24495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.1"	""	"194.6"	""	"188.2"	""	"257.0"	""	"256.2"	"264.5"	""	"1126"	"38"	"37.000"	"30.000"	"0.008156585535457"	"21"	"0"	"3.716E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGLFSGDPNWFPK"	"[R].dDGLFSGDPNWFPk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"1027.02539"	"2053.04350"	"2053.04311"	"0.19"	"0.00020"	"9/126"	"9"	"126"	"469735.793395996"	"HCD"	"MS2"	"0"	"31.3"	"100.000"	"73.6966"	"24484"	"24484"	"24465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.7"	""	"30.2"	""	"42.2"	""	"57.3"	""	"54.9"	"59.1"	""	"1124"	"51"	"37.000"	"30.000"	"0.000479442264077885"	"18"	"0"	"0.0001028"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGLFSGDPNWFPK"	"[R].dDGLFSGDPNWFPk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"685.01947"	"2053.04386"	"2053.04311"	"0.36"	"0.00025"	"13/126"	"13"	"126"	"4038843.387146"	"HCD"	"MS2"	"0.4575042"	"126.6"	"100.000"	"73.6899"	"24482"	"24482"	"24465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.0"	""	"172.4"	""	"176.1"	""	"221.1"	""	"235.6"	"240.7"	""	"1118"	"35"	"37.000"	"30.000"	"0.0180472821403736"	"22"	"0"	"1.496E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGLFSGDPNWFPK"	"[R].dDGLFSGDPNWFPk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"1027.02576"	"2053.04424"	"2053.04311"	"0.55"	"0.00056"	"10/126"	"10"	"126"	"540756.40020752"	"HCD"	"MS2"	"0"	"38.5"	"100.000"	"73.4082"	"24367"	"24367"	"24337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.5"	""	"47.2"	""	"55.7"	""	"69.4"	""	"58.6"	"70.5"	""	"1125"	"58"	"37.000"	"30.000"	"8.95617408966284E-05"	"23"	"0"	"9.509E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKAEELGLPILGVLR"	"[R].skAEELGLPILGVLR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"2"	"P07871"	"3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"P21775; P07871"	"3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1a PE=1 SV=2; 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.09711"	"2053.27677"	"2053.27853"	"-0.86"	"-0.00059"	"8/146"	"8"	"146"	"879008.278015137"	"HCD"	"MS2"	"28.79158"	"46.8"	"100.000"	"68.9254"	"22537"	"22537"	"22506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.7"	""	"58.7"	""	"63.6"	""	"79.3"	"1.4"	"87.9"	"90.8"	""	"200"	"13"	"30.000"	"23.000"	"0.452897579903621"	"13"	"0.0002277"	"0.001116"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKAEELGLPILGVLR"	"[R].skAEELGLPILGVLR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"2"	"P07871"	"3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"P21775; P07871"	"3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1a PE=1 SV=2; 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.09766"	"2053.27842"	"2053.27853"	"-0.06"	"-0.00004"	"13/146"	"13"	"146"	"2882663.35131836"	"HCD"	"MS2"	"65.77856"	"121.0"	"100.000"	"68.6094"	"22408"	"22408"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.5"	""	"169.1"	""	"167.5"	""	"207.6"	"1.0"	"208.7"	"201.8"	""	"191"	"38"	"29.000"	"22.000"	"0.00161437108971932"	"15"	"0"	"6.267E-07"	"1.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKAEELGLPILGVLR"	"[R].skAEELGLPILGVLR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"2"	"P07871"	"3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"P21775; P07871"	"3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1a PE=1 SV=2; 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.09784"	"2053.27896"	"2053.27853"	"0.21"	"0.00014"	"16/146"	"16"	"146"	"934109.471130371"	"HCD"	"MS2"	"45.03537"	"46.7"	"100.000"	"68.7556"	"22519"	"22519"	"22490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.0"	""	"58.9"	""	"60.9"	""	"84.3"	""	"88.0"	"87.0"	""	"191"	"12"	"29.000"	"22.000"	"0.582107736864362"	"13"	"0.0001308"	"0.0003107"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKAEELGLPILGVLR"	"[R].skAEELGLPILGVLR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"2"	"P07871"	"3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"P21775; P07871"	"3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1a PE=1 SV=2; 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.09796"	"2053.27933"	"2053.27853"	"0.39"	"0.00027"	"12/146"	"12"	"146"	"3171998.01867676"	"HCD"	"MS2"	"70.55874"	"125.4"	"100.000"	"68.4308"	"22386"	"22386"	"22362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.8"	""	"162.3"	""	"174.5"	""	"203.9"	"6.0"	"219.5"	"222.4"	""	"190"	"33"	"29.000"	"22.000"	"0.00531769721420354"	"15"	"0"	"8.927E-07"	"1.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFITDDFHDMMPK"	"[R].vFITDDFHDMMPk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"685.35358"	"2054.04618"	"2054.04913"	"-1.44"	"-0.00098"	"17/106"	"17"	"106"	"8398430.453125"	"HCD"	"MS2"	"2.476944"	"266.4"	"100.000"	"64.1006"	"20628"	"20628"	"20611"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.0"	""	"390.8"	""	"374.6"	""	"394.8"	"3.7"	"510.2"	"496.2"	""	"1131"	"33"	"37.000"	"30.000"	"0.0283421380616223"	"19"	"0"	"1.824E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFITDDFHDMMPK"	"[R].vFITDDFHDMMPk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7179"	"0.0000"	"1"	"1"	"1"	"685.35400"	"2054.04746"	"2054.04913"	"-0.81"	"-0.00056"	"12/106"	"12"	"106"	"9272674.50683594"	"HCD"	"MS2"	"17.91997"	"292.9"	"100.000"	"63.8650"	"20478"	"20478"	"20457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"395.3"	""	"411.9"	""	"441.5"	""	"436.6"	"1.6"	"544.1"	"544.3"	""	"1128"	"39"	"37.000"	"30.000"	"0.00741786805356422"	"26"	"0"	"8.411E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFITDDFHDMMPK"	"[R].vFITDDFHDMMPk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"4"	"4"	"0.9032"	"0.0000"	"1"	"1"	"1"	"514.26746"	"2054.04799"	"2054.04913"	"-0.55"	"-0.00028"	"9/106"	"9"	"106"	"1804490.5291748"	"HCD"	"MS2"	"29.28407"	"45.9"	"100.000"	"64.1507"	"20595"	"20595"	"20569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.7"	""	"63.3"	""	"73.6"	""	"70.0"	""	"84.4"	"90.1"	""	"1134"	"31"	"37.000"	"30.000"	"0.0491567383554909"	"17"	"0"	"3.744E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFITDDFHDMMPK"	"[R].vFITDDFHDMMPk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.35449"	"2054.04892"	"2054.04913"	"-0.10"	"-0.00007"	"12/106"	"12"	"106"	"6719964.32922363"	"HCD"	"MS2"	"50.2621"	"208.2"	"100.000"	"63.8126"	"20510"	"20510"	"20483"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"315.9"	""	"272.4"	""	"289.9"	""	"323.6"	"2.3"	"369.6"	"398.0"	""	"1126"	"36"	"37.000"	"30.000"	"0.0151184892290574"	"15"	"0"	"9.005E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFITDDFHDMMPK"	"[R].vFITDDFHDMMPk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"685.35486"	"2054.05002"	"2054.04913"	"0.44"	"0.00030"	"12/106"	"12"	"106"	"4378610.05950928"	"HCD"	"MS2"	"12.6665"	"165.8"	"100.000"	"64.1713"	"20603"	"20603"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"213.1"	""	"221.9"	""	"235.1"	""	"267.6"	"4.4"	"311.6"	"318.3"	""	"1130"	"38"	"37.000"	"30.000"	"0.00916322705007797"	"22"	"0"	"1.668E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPSSTFEQVSQLVK"	"[K].fPSSTFEQVSQLVk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.72095"	"2055.14829"	"2055.15266"	"-2.13"	"-0.00146"	"9/130"	"9"	"130"	"1620521.12567139"	"HCD"	"MS2"	"18.83848"	"61.7"	"100.000"	"71.8022"	"23711"	"23711"	"23683"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.5"	""	"87.7"	""	"95.9"	""	"99.1"	""	"100.6"	"109.6"	""	"1106"	"9"	"37.000"	"30.000"	"7.14044258308284"	"13"	"0.001966"	"0.03031"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEAALETIQNMSK"	"[K].tYEAALETIQNMSk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1029.05115"	"2057.09502"	"2057.09891"	"-1.89"	"-0.00195"	"5/136"	"5"	"136"	"89418.8793945313"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"66.7458"	"21655"	"21655"	"21625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"9.2"	""	"11.8"	""	"9.5"	""	"13.7"	"20.8"	""	"1294"	"15"	"38.000"	"31.000"	"2.06968513597034"	"13"	"0.00103"	"0.012"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEAALETIQNMSK"	"[K].tYEAALETIQNMSk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"686.37115"	"2057.09891"	"2057.09891"	"0.00"	"0.00000"	"11/136"	"11"	"136"	"1705384.96325684"	"HCD"	"MS2"	"17.84401"	"68.0"	"100.000"	"66.8081"	"21680"	"21680"	"21657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.7"	""	"79.6"	""	"78.5"	""	"119.8"	"1.1"	"140.1"	"153.6"	""	"1299"	"28"	"38.000"	"31.000"	"0.0974045300658791"	"22"	"0"	"4.898E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNGVTAVLGPVAEVK"	"[R].fPnGVTAVLGPVAEVk.[A]"	"N-Term(TMT6plex); N3(Deamidated); K16(TMT6plex)"	"1"	"1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"0"	"3"	"3"	"0.7234"	"0.0000"	"1"	"1"	"1"	"686.40472"	"2057.19962"	"2057.20470"	"-2.47"	"-0.00169"	"16/162"	"16"	"162"	"1070977.15783691"	"HCD"	"MS2"	"25.8982"	"42.2"	"100.000"	"75.8220"	"25351"	"25351"	"25329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.2"	""	"55.2"	""	"63.6"	""	"64.7"	""	"81.2"	"79.6"	""	"707"	"47"	"35.000"	"28.000"	"0.00071513727966277"	"28"	"0"	"3.715E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQNLNDVLVSLEK"	"[K].lNQNLNDVLVSLEk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"686.40479"	"2057.19980"	"2057.20068"	"-0.42"	"-0.00029"	"13/140"	"13"	"140"	"1437810.15661621"	"HCD"	"MS2"	"28.88211"	"49.1"	"100.000"	"75.5327"	"25285"	"25285"	"25263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.3"	""	"65.8"	""	"78.9"	""	"71.8"	"0.7"	"74.8"	"100.9"	""	"707"	"30"	"35.000"	"28.000"	"0.0389394145922891"	""	"0"	"0.0001229"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQNLNDVLVSLEK"	"[K].lNQNLNDVLVSLEk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"686.40527"	"2057.20127"	"2057.20068"	"0.29"	"0.00020"	"15/140"	"15"	"140"	"1074819.50683594"	"HCD"	"MS2"	"53.84455"	"41.2"	"100.000"	"75.5102"	"25224"	"25224"	"25201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.0"	""	"54.3"	""	"61.8"	""	"78.1"	""	"65.8"	"80.1"	""	"692"	"32"	"35.000"	"28.000"	"0.0212361653787019"	"22"	"0"	"8.207E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNGVTAVLGPVAEVK"	"[R].fPnGVTAVLGPVAEVk.[A]"	"N-Term(TMT6plex); N3(Deamidated); K16(TMT6plex)"	"1"	"1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"686.40570"	"2057.20255"	"2057.20470"	"-1.05"	"-0.00072"	"15/162"	"15"	"162"	"1109881.57653809"	"HCD"	"MS2"	"19.30692"	"36.6"	"100.000"	"75.8928"	"25432"	"25432"	"25407"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.5"	""	"51.7"	""	"47.5"	""	"64.0"	"1.0"	"68.1"	"70.9"	""	"690"	"66"	"35.000"	"28.000"	"7.86718014840143E-06"	"27"	"0"	"7.817E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNGVTAVLGPVAEVK"	"[R].fPnGVTAVLGPVAEVk.[A]"	"N-Term(TMT6plex); N3(Deamidated); K16(TMT6plex)"	"1"	"1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"686.40698"	"2057.20639"	"2057.20470"	"0.82"	"0.00057"	"14/162"	"14"	"162"	"920816.02130127"	"HCD"	"MS2"	"16.20252"	"32.3"	"100.000"	"76.1515"	"25482"	"25482"	"25457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.0"	""	"40.4"	""	"37.9"	""	"59.3"	"0.7"	"66.1"	"61.7"	""	"663"	"26"	"35.000"	"28.000"	"0.0930001250980994"	"19"	"0.0001859"	"0.0003535"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETSGNLENLLLAVVK"	"[R].eTSGNLENLLLAVVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"686.74487"	"2058.22007"	"2058.22108"	"-0.49"	"-0.00034"	"10/144"	"10"	"144"	"426241.943359375"	"HCD"	"MS2"	"25.97556"	"12.2"	"100.000"	"87.6929"	"30215"	"30215"	"30209"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.1"	""	"8.9"	""	"13.0"	""	"25.6"	""	"24.8"	"29.5"	""	"616"	"49"	"34.000"	"27.000"	"0.000419324962199513"	"20"	"0"	"2.39E-06"	"1.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETSGNLENLLLAVVK"	"[R].eTSGNLENLLLAVVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"1029.61401"	"2058.22075"	"2058.22108"	"-0.16"	"-0.00016"	"7/144"	"7"	"144"	"104318.396789551"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"88.2115"	"30409"	"30409"	"30396"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.2"	""	"7.0"	""	"7.4"	""	"16.8"	""	"17.4"	"20.0"	""	"616"	"8"	"34.000"	"27.000"	"5.37713223099515"	"14"	"0.002132"	"0.03215"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETSGNLENLLLAVVK"	"[R].eTSGNLENLLLAVVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"1029.61401"	"2058.22075"	"2058.22108"	"-0.16"	"-0.00016"	"13/144"	"13"	"144"	"575213.338867188"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"87.9261"	"30302"	"30302"	"30295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.4"	""	"24.9"	""	"36.7"	""	"96.6"	""	"94.1"	"104.1"	""	"616"	"78"	"34.000"	"27.000"	"5.15882405816141E-07"	""	"0"	"4.933E-07"	"1.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETSGNLENLLLAVVK"	"[R].eTSGNLENLLLAVVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"686.74530"	"2058.22135"	"2058.22108"	"0.13"	"0.00009"	"15/144"	"15"	"144"	"528740.547729492"	"HCD"	"MS2"	"14.73126"	"16.3"	"100.000"	"88.1154"	"30327"	"30327"	"30315"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.2"	""	"16.3"	""	"17.6"	""	"30.0"	""	"38.3"	"36.7"	""	"606"	"42"	"34.000"	"27.000"	"0.00188123317371709"	"19"	"0"	"5.216E-06"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETSGNLENLLLAVVK"	"[R].eTSGNLENLLLAVVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"686.74530"	"2058.22135"	"2058.22108"	"0.13"	"0.00009"	"9/144"	"9"	"144"	"3012389.65240479"	"HCD"	"MS2"	"0"	"72.0"	"100.000"	"87.9649"	"30316"	"30316"	"30313"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.3"	""	"53.0"	""	"63.1"	""	"154.4"	""	"171.2"	"173.4"	""	"606"	"38"	"34.000"	"27.000"	"0.0044406099580964"	"19"	"0"	"2.345E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETSGNLENLLLAVVK"	"[R].eTSGNLENLLLAVVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"1029.61438"	"2058.22148"	"2058.22108"	"0.20"	"0.00020"	"13/144"	"13"	"144"	"855664.577514648"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"87.8509"	"30223"	"30223"	"30214"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.5"	""	"45.2"	""	"58.2"	""	"151.3"	""	"153.5"	"152.3"	""	"606"	"61"	"34.000"	"27.000"	"2.28266735811316E-05"	"25"	"0"	"2.365E-06"	"1.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETSGNLENLLLAVVK"	"[R].eTSGNLENLLLAVVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"686.74536"	"2058.22153"	"2058.22108"	"0.22"	"0.00015"	"9/144"	"9"	"144"	"3504575.50933838"	"HCD"	"MS2"	"0.1322808"	"82.0"	"100.000"	"87.8465"	"30222"	"30222"	"30214"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.4"	""	"60.8"	""	"72.2"	""	"166.5"	"0.0"	"198.9"	"201.1"	""	"606"	"38"	"34.000"	"27.000"	"0.00453359403796613"	"19"	"0"	"1.796E-05"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETSGNLENLLLAVVK"	"[R].eTSGNLENLLLAVVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"686.74567"	"2058.22245"	"2058.22108"	"0.67"	"0.00046"	"15/144"	"15"	"144"	"318315.43182373"	"HCD"	"MS2"	"10.99926"	"13.2"	"100.000"	"87.5690"	"30117"	"30117"	"30104"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.4"	"1.8"	"10.0"	""	"15.6"	""	"30.0"	""	"24.7"	"28.5"	""	"602"	"46"	"34.000"	"27.000"	"0.000686382963672125"	"22"	"0"	"7.841E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETSGNLENLLLAVVK"	"[R].eTSGNLENLLLAVVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1029.61499"	"2058.22270"	"2058.22108"	"0.79"	"0.00081"	"7/144"	"7"	"144"	"77889.6141967773"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"87.5713"	"30118"	"30118"	"30104"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"3.9"	""	"3.4"	""	"12.0"	""	"14.6"	"10.4"	""	"612"	"10"	"34.000"	"27.000"	"2.81009774523976"	"13"	"0.001058"	"0.01335"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLPSPDKLPGFK"	"[K].aTLPSPDkLPGFk.[M]"	"N-Term(TMT6plex); K8(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"686.75610"	"2058.25376"	"2058.25662"	"-1.39"	"-0.00096"	"7/116"	"7"	"116"	"3772497.96728516"	"HCD"	"MS2"	"0"	"248.3"	"100.000"	"50.2243"	"14930"	"14930"	"14918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"435.2"	""	"397.3"	""	"390.9"	""	"354.6"	"2.4"	"391.5"	"373.3"	""	"397"	"5"	"32.000"	"25.000"	"6.86689664984852"	"13"	"0.0006037"	"0.004884"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLPSPDKLPGFK"	"[K].aTLPSPDkLPGFk.[M]"	"N-Term(TMT6plex); K8(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"686.75684"	"2058.25595"	"2058.25662"	"-0.33"	"-0.00022"	"9/116"	"9"	"116"	"10172801.9013062"	"HCD"	"MS2"	"7.722887"	"461.1"	"77.383"	"50.5500"	"15062"	"15062"	"15042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"826.7"	""	"720.6"	""	"722.6"	""	"629.6"	"7.2"	"712.2"	"736.0"	""	"392"	"16"	"32.000"	"25.000"	"0.478912388328018"	"14"	"0.0001889"	"0.000444"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLPSPDKLPGFK"	"[K].aTLPSPDkLPGFk.[M]"	"N-Term(TMT6plex); K8(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"686.75690"	"2058.25614"	"2058.25662"	"-0.24"	"-0.00016"	"14/116"	"14"	"116"	"7110649.42791748"	"HCD"	"MS2"	"0"	"420.6"	"100.000"	"50.5210"	"15101"	"15101"	"15076"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"779.7"	""	"710.3"	""	"680.9"	""	"563.6"	"2.1"	"617.5"	"614.7"	""	"392"	"19"	"32.000"	"25.000"	"0.241688547312866"	"14"	"0.0001308"	"0.000211"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLPSPDKLPGFK"	"[K].aTLPSPDkLPGFk.[M]"	"N-Term(TMT6plex); K8(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"686.75714"	"2058.25687"	"2058.25662"	"0.12"	"0.00008"	"15/116"	"15"	"116"	"8051854.25921631"	"HCD"	"MS2"	"16.78454"	"430.9"	"100.000"	"50.8235"	"15224"	"15224"	"15206"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"750.1"	""	"654.6"	""	"686.3"	""	"575.6"	"7.6"	"691.1"	"706.5"	""	"390"	"15"	"32.000"	"25.000"	"0.633920229901596"	"13"	"0.0001859"	"0.0003459"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWSFVK"	"[R].fAPPQPAEPWSFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"3"	"Q63108"	"Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63010; Q64573; Q63108"	"Liver carboxylesterase B-1 OS=Rattus norvegicus OX=10116 PE=1 SV=1; Liver carboxylesterase 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.05017"	"2059.13596"	"2059.14170"	"-2.79"	"-0.00191"	"12/128"	"12"	"128"	"1855871.02008057"	"HCD"	"MS2"	"16.42316"	"65.4"	"100.000"	"70.3987"	"23138"	"23138"	"23107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.9"	""	"98.1"	""	"96.4"	""	"88.3"	""	"123.8"	"116.8"	""	"1130"	"31"	"37.000"	"30.000"	"0.040930631744237"	"14"	"0"	"0.0001306"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPSLLTHNENMVAK"	"[K].fPSLLTHNENMVAk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"687.05048"	"2059.13687"	"2059.14105"	"-2.03"	"-0.00139"	"13/128"	"13"	"128"	"3690452.9677124"	"HCD"	"MS2"	"38.42936"	"173.4"	"100.000"	"49.7880"	"14757"	"14757"	"14735"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"253.6"	""	"222.6"	""	"246.1"	""	"252.8"	"9.1"	"342.3"	"317.2"	""	"1130"	"49"	"37.000"	"30.000"	"0.000690316807993153"	"23"	"0"	"1.551E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWSFVK"	"[R].fAPPQPAEPWSFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"3"	"Q63108"	"Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63010; Q64573; Q63108"	"Liver carboxylesterase B-1 OS=Rattus norvegicus OX=10116 PE=1 SV=1; Liver carboxylesterase 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.05103"	"2059.13852"	"2059.14170"	"-1.55"	"-0.00106"	"11/128"	"11"	"128"	"2029804.14849854"	"HCD"	"MS2"	"12.50626"	"67.5"	"100.000"	"70.2865"	"23144"	"23144"	"23114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.8"	""	"106.5"	""	"100.5"	""	"96.4"	"1.0"	"116.3"	"119.7"	""	"1121"	"27"	"37.000"	"30.000"	"0.117645580477098"	"14"	"0.0001308"	"0.0002098"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVYGKPVQGVAYTR"	"[R].yVYGkPVQGVAYTR.[F]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.06250"	"2059.17295"	"2059.17407"	"-0.54"	"-0.00037"	"11/122"	"11"	"122"	"2922210.05822754"	"HCD"	"MS2"	"6.593144"	"169.8"	"100.000"	"37.7267"	"9888"	"9888"	"9857"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"481.1"	""	"297.1"	""	"193.3"	""	"219.0"	"3.8"	"211.1"	"191.7"	""	"957"	"22"	"36.000"	"29.000"	"0.319067039068718"	"14"	"0"	"6.546E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVYGKPVQGVAYTR"	"[R].yVYGkPVQGVAYTR.[F]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.06287"	"2059.17405"	"2059.17407"	"-0.01"	"-0.00001"	"10/122"	"10"	"122"	"2111188.94677734"	"HCD"	"MS2"	"0"	"139.9"	"100.000"	"37.6495"	"9813"	"9813"	"9784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"374.0"	""	"234.8"	""	"168.1"	""	"191.6"	"2.2"	"181.7"	"164.5"	""	"955"	"23"	"36.000"	"29.000"	"0.231192305521408"	"14"	"0"	"5.924E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSNPVLEAFGNAK"	"[R].lLQSNPVLEAFGNAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"1030.09937"	"2059.19145"	"2059.19520"	"-1.82"	"-0.00187"	"17/146"	"17"	"146"	"241681.401184082"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"74.1001"	"24701"	"24701"	"24671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"21.7"	""	"27.3"	""	"20.4"	"0.7"	"31.1"	"36.2"	""	"845"	"66"	"36.000"	"29.000"	"1.03950531275237E-05"	"19"	"0"	"2.929E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSNPVLEAFGNAK"	"[R].lLQSNPVLEAFGNAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"0.9178"	"0.0000"	"1"	"1"	"1"	"687.06927"	"2059.19327"	"2059.19520"	"-0.93"	"-0.00064"	"17/146"	"17"	"146"	"4865928.83282471"	"HCD"	"MS2"	"1.118637"	"103.3"	"81.092"	"74.2684"	"24769"	"24769"	"24751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.4"	""	"144.8"	""	"135.4"	""	"148.9"	""	"204.6"	"213.2"	""	"841"	"73"	"36.000"	"29.000"	"2.18155416369628E-06"	"23"	"0"	"3.087E-06"	"1.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSNPVLEAFGNAK"	"[R].lLQSNPVLEAFGNAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"0.9828"	"0.0000"	"1"	"1"	"1"	"687.06940"	"2059.19364"	"2059.19520"	"-0.76"	"-0.00052"	"17/146"	"17"	"146"	"2411502.45556641"	"HCD"	"MS2"	"37.29593"	"81.0"	"100.000"	"73.9643"	"24645"	"24645"	"24623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.2"	""	"110.4"	""	"106.7"	""	"125.8"	"1.3"	"158.2"	"158.8"	""	"830"	"58"	"36.000"	"29.000"	"6.25241932467498E-05"	"17"	"0"	"3.355E-06"	"1.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSNPVLEAFGNAK"	"[R].lLQSNPVLEAFGNAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"687.06946"	"2059.19382"	"2059.19520"	"-0.67"	"-0.00046"	"17/146"	"17"	"146"	"4541370.19403076"	"HCD"	"MS2"	"1.677511"	"124.6"	"95.161"	"74.2781"	"24722"	"24722"	"24705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.0"	""	"180.1"	""	"164.9"	""	"175.1"	"1.2"	"244.3"	"265.1"	""	"845"	"63"	"36.000"	"29.000"	"2.05034391318496E-05"	"20"	"0"	"3.718E-06"	"1.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSNPVLEAFGNAK"	"[R].lLQSNPVLEAFGNAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1030.10059"	"2059.19390"	"2059.19520"	"-0.63"	"-0.00065"	"13/146"	"13"	"146"	"261822.261169434"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"74.0726"	"24638"	"24638"	"24609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.4"	""	"28.4"	""	"28.9"	""	"28.8"	""	"36.1"	"46.3"	""	"845"	"45"	"36.000"	"29.000"	"0.00122694957151123"	"15"	"0"	"2.972E-05"	"0.96"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSNPVLEAFGNAK"	"[R].lLQSNPVLEAFGNAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"9"	"1030.10168"	"2059.19609"	"2059.19520"	"0.44"	"0.00045"	"5/146"	"5"	"146"	"87405.0281982422"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"74.3887"	"24767"	"24767"	"24737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"8.8"	""	"8.7"	""	"11.4"	""	"13.2"	"12.2"	""	"824"	"3"	"36.000"	"29.000"	"22.5370576712317"	"13"	"0.001846"	"0.02643"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSNPVLEAFGNAK"	"[R].lLQSNPVLEAFGNAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1030.10193"	"2059.19658"	"2059.19520"	"0.67"	"0.00069"	"6/146"	"6"	"146"	"70301.319519043"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"74.4114"	"24828"	"24828"	"24799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.8"	""	"6.7"	""	"6.4"	""	"6.2"	""	"9.8"	"9.5"	""	"826"	"7"	"36.000"	"29.000"	"7.51536454605923"	"13"	"0.00162"	"0.02194"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQSNPVLEAFGNAK"	"[R].lLQSNPVLEAFGNAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"0.9859"	"0.0000"	"1"	"1"	"1"	"687.07050"	"2059.19693"	"2059.19520"	"0.84"	"0.00058"	"17/146"	"17"	"146"	"2621684.46575928"	"HCD"	"MS2"	"16.2113"	"81.4"	"100.000"	"73.9804"	"24600"	"24600"	"24577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.8"	""	"103.4"	""	"108.7"	""	"126.1"	""	"161.5"	"168.5"	""	"823"	"71"	"36.000"	"29.000"	"3.51859952352047E-06"	"17"	"0"	"2.64E-06"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDQVnGVLVLSLLDk.[I]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.2812"	"0.0000"	"1"	"1"	"1"	"687.07227"	"2059.20224"	"2059.20509"	"-1.38"	"-0.00095"	"12/162"	"12"	"162"	"207092.375976563"	"HCD"	"MS2"	"5.167772"	"9.8"	"100.000"	"87.2840"	"30005"	"30005"	"29981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.8"	""	"10.3"	""	"12.3"	""	"17.9"	""	"16.9"	"26.9"	""	"790"	"32"	"35.000"	"28.000"	"0.0272017657055989"	"19"	"7.476E-05"	"0.000189"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDQVnGVLVLSLLDk.[I]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.0833"	"0.0000"	"1"	"1"	"1"	"687.07251"	"2059.20298"	"2059.20509"	"-1.03"	"-0.00071"	"16/162"	"16"	"162"	"1359449.12786865"	"HCD"	"MS2"	"11.9755"	"33.2"	"100.000"	"86.2584"	"29641"	"29641"	"29622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.3"	""	"32.8"	""	"33.1"	""	"75.6"	"0.3"	"67.9"	"72.4"	""	"789"	"48"	"35.000"	"28.000"	"0.000559818192306347"	"25"	"0"	"4.846E-06"	"1.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDQVnGVLVLSLLDk.[I]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"1030.10522"	"2059.20317"	"2059.20509"	"-0.93"	"-0.00096"	"5/162"	"5"	"162"	"86465.8774414063"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"87.0213"	"29899"	"29899"	"29870"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"5.3"	""	"2.7"	""	"12.2"	""	"13.0"	"14.2"	""	"788"	"24"	"35.000"	"28.000"	"0.161248699933624"	"28"	"0.001454"	"0.01982"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDQVnGVLVLSLLDk.[I]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.1702"	"0.0000"	"1"	"1"	"1"	"687.07281"	"2059.20389"	"2059.20509"	"-0.58"	"-0.00040"	"15/162"	"15"	"162"	"1283765.98394775"	"HCD"	"MS2"	"13.0235"	"34.9"	"100.000"	"86.1465"	"29543"	"29543"	"29526"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.5"	""	"27.5"	""	"35.1"	""	"78.5"	"1.1"	"81.9"	"72.5"	""	"778"	"47"	"35.000"	"28.000"	"0.000862878407302285"	"24"	"0"	"2.545E-05"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDQVnGVLVLSLLDk.[I]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"1030.10571"	"2059.20415"	"2059.20509"	"-0.46"	"-0.00047"	"4/162"	"4"	"162"	"72144.3192138672"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"87.0988"	"29981"	"29981"	"29961"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	"4.8"	""	"4.1"	""	"8.8"	""	"13.9"	"11.7"	""	"766"	"13"	"35.000"	"28.000"	"2.07586341023822"	"17"	"0.002829"	"0.04726"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDqVNGVLVLSLLDk.[I]"	"N-Term(TMT6plex); Q3(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"2"	"2"	"1030.10571"	"2059.20415"	"2059.20509"	"-0.46"	"-0.00047"	"4/162"	"4"	"162"	"72144.3192138672"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"87.0988"	"29981"	"29981"	"29961"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	"4.8"	""	"4.1"	""	"8.8"	""	"13.9"	"11.7"	""	"766"	"13"	"35.000"	"28.000"	"2.07586341023822"	"17"	"0.002829"	"0.04726"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDQVnGVLVLSLLDk.[I]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.1915"	"0.0000"	"1"	"1"	"1"	"687.07306"	"2059.20462"	"2059.20509"	"-0.23"	"-0.00016"	"15/162"	"15"	"162"	"1110007.41503906"	"HCD"	"MS2"	"21.20238"	"28.4"	"100.000"	"87.0617"	"29966"	"29966"	"29945"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.5"	""	"22.8"	""	"28.3"	""	"52.0"	""	"65.1"	"71.5"	""	"765"	"47"	"35.000"	"28.000"	"0.000727162442070662"	"24"	"0"	"8.006E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDQVnGVLVLSLLDk.[I]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.0250"	"0.0000"	"1"	"1"	"1"	"687.07306"	"2059.20462"	"2059.20509"	"-0.23"	"-0.00016"	"13/162"	"13"	"162"	"968337.653015137"	"HCD"	"MS2"	"21.76189"	"27.3"	"100.000"	"86.9617"	"29874"	"29874"	"29854"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.6"	""	"24.4"	""	"27.0"	""	"55.8"	"0.1"	"55.4"	"64.6"	""	"765"	"40"	"35.000"	"28.000"	"0.00406098550628512"	"24"	"0"	"6.64E-06"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDqVNGVLVLSLLDk.[I]"	"N-Term(TMT6plex); Q3(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0250"	"2"	"2"	"2"	"687.07306"	"2059.20462"	"2059.20509"	"-0.23"	"-0.00016"	"15/162"	"15"	"162"	"968337.653015137"	"HCD"	"MS2"	"21.76189"	"27.3"	"100.000"	"86.9617"	"29874"	"29874"	"29854"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.6"	""	"24.4"	""	"27.0"	""	"55.8"	"0.1"	"55.4"	"64.6"	""	"765"	"39"	"35.000"	"28.000"	"0.00461988791928344"	"24"	"0"	"1.014E-05"	"1.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDQVnGVLVLSLLDk.[I]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"1030.10693"	"2059.20659"	"2059.20509"	"0.73"	"0.00075"	"5/162"	"5"	"162"	"68970.2329101563"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"86.3137"	"29664"	"29664"	"29638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.0"	""	"2.0"	""	"2.2"	""	"10.7"	""	"12.3"	"14.9"	""	"759"	"16"	"35.000"	"28.000"	"1.06221341080124"	"24"	"0.001966"	"0.03107"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDQVNGVLVLSLLDK"	"[K].sDQVnGVLVLSLLDk.[I]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"1030.10718"	"2059.20708"	"2059.20509"	"0.96"	"0.00099"	"3/162"	"3"	"162"	"57409.680480957"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"86.3148"	"29612"	"29612"	"29585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"4.3"	""	"4.7"	""	"14.0"	""	"14.5"	"8.8"	""	"768"	"3"	"35.000"	"28.000"	"21.0538354529608"	"13"	"0.003197"	"0.06693"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPEPAEPWSFVK"	"[R].fAPPEPAEPWSFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.0588"	"0.0000"	"1"	"1"	"1"	"1030.56445"	"2060.12163"	"2060.12572"	"-1.99"	"-0.00205"	"9/116"	"9"	"116"	"874967.19354248"	"HCD"	"MS2"	"18.3775"	"61.4"	"100.000"	"72.4403"	"24023"	"24023"	"23999"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.4"	""	"104.4"	""	"105.7"	""	"66.2"	""	"102.6"	"99.3"	""	"1249"	"17"	"37.000"	"30.000"	"1.2431755001975"	"29"	"0.0003839"	"0.001642"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FAPPEPAEPWSFVK"	"[R].fAPPEPAEPWSFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"1030.56519"	"2060.12309"	"2060.12572"	"-1.27"	"-0.00131"	"12/116"	"12"	"116"	"1149370.93933105"	"HCD"	"MS2"	"0"	"58.5"	"100.000"	"72.1882"	"23869"	"23869"	"23841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.8"	""	"97.3"	""	"79.8"	""	"67.3"	"1.0"	"110.7"	"93.5"	""	"1277"	"71"	"38.000"	"31.000"	"5.4596009617687E-06"	"17"	"0"	"5.579E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"FAPPQPAEPWSFVK"	"[R].fAPPqPAEPWSFVk.[N]"	"N-Term(TMT6plex); Q5(Deamidated); K14(TMT6plex)"	"1"	"3"	"Q63108"	"Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63010; Q64573; Q63108"	"Liver carboxylesterase B-1 OS=Rattus norvegicus OX=10116 PE=1 SV=1; Liver carboxylesterase 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"1030.56519"	"2060.12309"	"2060.12572"	"-1.27"	"-0.00131"	"12/128"	"12"	"128"	"1149370.93933105"	"HCD"	"MS2"	"0"	"58.5"	"100.000"	"72.1882"	"23869"	"23869"	"23841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.8"	""	"97.3"	""	"79.8"	""	"67.3"	"1.0"	"110.7"	"93.5"	""	"1277"	"71"	"38.000"	"31.000"	"5.4596009617687E-06"	"17"	"0"	"5.579E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FAPPEPAEPWSFVK"	"[R].fAPPEPAEPWSFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"687.37952"	"2060.12400"	"2060.12572"	"-0.84"	"-0.00057"	"12/116"	"12"	"116"	"18628430.2507324"	"HCD"	"MS2"	"3.340458"	"135.5"	"30.738"	"72.3435"	"23984"	"23984"	"23967"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.8"	""	"217.8"	""	"190.0"	""	"160.1"	""	"269.6"	"245.5"	""	"1257"	"43"	"37.000"	"30.000"	"0.00347780543642091"	"15"	"0.0001889"	"0.0007685"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"FAPPQPAEPWSFVK"	"[R].fAPPqPAEPWSFVk.[N]"	"N-Term(TMT6plex); Q5(Deamidated); K14(TMT6plex)"	"1"	"3"	"Q63108"	"Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63010; Q64573; Q63108"	"Liver carboxylesterase B-1 OS=Rattus norvegicus OX=10116 PE=1 SV=1; Liver carboxylesterase 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"687.37952"	"2060.12400"	"2060.12572"	"-0.84"	"-0.00057"	"12/128"	"12"	"128"	"18628430.2507324"	"HCD"	"MS2"	"3.340458"	"135.5"	"30.738"	"72.3435"	"23984"	"23984"	"23967"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.8"	""	"217.8"	""	"190.0"	""	"160.1"	""	"269.6"	"245.5"	""	"1257"	"43"	"37.000"	"30.000"	"0.00347780543642091"	"15"	"0.0001889"	"0.0007685"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FAPPEPAEPWSFVK"	"[R].fAPPEPAEPWSFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"4"	"4"	"0.0000"	"0.0000"	"1"	"1"	"1"	"515.78650"	"2060.12417"	"2060.12572"	"-0.75"	"-0.00039"	"12/116"	"12"	"116"	"1665426.19451904"	"HCD"	"MS2"	"5.566097"	"39.5"	"100.000"	"72.3727"	"23944"	"23944"	"23921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.0"	""	"55.5"	""	"51.1"	""	"57.6"	""	"82.7"	"70.2"	""	"1257"	"35"	"37.000"	"30.000"	"0.0218426477467055"	"15"	"0.0001308"	"0.0002526"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"FAPPQPAEPWSFVK"	"[R].fAPPqPAEPWSFVk.[N]"	"N-Term(TMT6plex); Q5(Deamidated); K14(TMT6plex)"	"1"	"3"	"Q63108"	"Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63010; Q64573; Q63108"	"Liver carboxylesterase B-1 OS=Rattus norvegicus OX=10116 PE=1 SV=1; Liver carboxylesterase 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"4"	"4"	""	"0.0000"	"2"	"2"	"2"	"515.78650"	"2060.12417"	"2060.12572"	"-0.75"	"-0.00039"	"12/128"	"12"	"128"	"1665426.19451904"	"HCD"	"MS2"	"5.566097"	"39.5"	"100.000"	"72.3727"	"23944"	"23944"	"23921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.0"	""	"55.5"	""	"51.1"	""	"57.6"	""	"82.7"	"70.2"	""	"1257"	"35"	"37.000"	"30.000"	"0.0218426477467055"	"15"	"0.0001308"	"0.0002526"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FAPPEPAEPWSFVK"	"[R].fAPPEPAEPWSFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"1030.56580"	"2060.12432"	"2060.12572"	"-0.68"	"-0.00070"	"12/116"	"12"	"116"	"809078.80670166"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"72.1037"	"23886"	"23886"	"23855"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.0"	""	"68.9"	""	"53.3"	""	"52.0"	"0.6"	"77.3"	"62.2"	""	"1258"	"72"	"37.000"	"30.000"	"3.72092267896373E-06"	"18"	"0"	"2.684E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"FAPPQPAEPWSFVK"	"[R].fAPPqPAEPWSFVk.[N]"	"N-Term(TMT6plex); Q5(Deamidated); K14(TMT6plex)"	"1"	"3"	"Q63108"	"Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63010; Q64573; Q63108"	"Liver carboxylesterase B-1 OS=Rattus norvegicus OX=10116 PE=1 SV=1; Liver carboxylesterase 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"1030.56580"	"2060.12432"	"2060.12572"	"-0.68"	"-0.00070"	"12/128"	"12"	"128"	"809078.80670166"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"72.1037"	"23886"	"23886"	"23855"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.0"	""	"68.9"	""	"53.3"	""	"52.0"	"0.6"	"77.3"	"62.2"	""	"1258"	"72"	"37.000"	"30.000"	"3.72092267896373E-06"	"18"	"0"	"2.684E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FAPPEPAEPWSFVK"	"[R].fAPPEPAEPWSFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"4"	"4"	"0.0000"	"0.0000"	"1"	"1"	"1"	"515.78668"	"2060.12490"	"2060.12572"	"-0.40"	"-0.00021"	"10/116"	"10"	"116"	"1587198.70385742"	"HCD"	"MS2"	"15.16761"	"35.6"	"100.000"	"72.3227"	"23975"	"23975"	"23951"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.6"	""	"48.5"	""	"48.6"	""	"48.7"	"0.4"	"72.2"	"66.7"	""	"1253"	"26"	"37.000"	"30.000"	"0.170184920192768"	"14"	"0.0001308"	"0.0003094"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"FAPPQPAEPWSFVK"	"[R].fAPPqPAEPWSFVk.[N]"	"N-Term(TMT6plex); Q5(Deamidated); K14(TMT6plex)"	"1"	"3"	"Q63108"	"Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63010; Q64573; Q63108"	"Liver carboxylesterase B-1 OS=Rattus norvegicus OX=10116 PE=1 SV=1; Liver carboxylesterase 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"4"	"4"	""	"0.0000"	"2"	"2"	"2"	"515.78668"	"2060.12490"	"2060.12572"	"-0.40"	"-0.00021"	"10/128"	"10"	"128"	"1587198.70385742"	"HCD"	"MS2"	"15.16761"	"35.6"	"100.000"	"72.3227"	"23975"	"23975"	"23951"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.6"	""	"48.5"	""	"48.6"	""	"48.7"	"0.4"	"72.2"	"66.7"	""	"1253"	"26"	"37.000"	"30.000"	"0.170184920192768"	"14"	"0.0001308"	"0.0003094"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FAPPEPAEPWSFVK"	"[R].fAPPEPAEPWSFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"687.38062"	"2060.12729"	"2060.12572"	"0.76"	"0.00052"	"13/116"	"13"	"116"	"23640457.9226074"	"HCD"	"MS2"	"1.863804"	"170.1"	"30.220"	"72.3567"	"23938"	"23938"	"23921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.8"	""	"273.9"	""	"243.7"	""	"188.3"	""	"335.3"	"306.6"	""	"1237"	"40"	"37.000"	"30.000"	"0.00622787237184841"	"15"	"0.0001308"	"0.0002468"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"FAPPQPAEPWSFVK"	"[R].fAPPqPAEPWSFVk.[N]"	"N-Term(TMT6plex); Q5(Deamidated); K14(TMT6plex)"	"1"	"3"	"Q63108"	"Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63010; Q64573; Q63108"	"Liver carboxylesterase B-1 OS=Rattus norvegicus OX=10116 PE=1 SV=1; Liver carboxylesterase 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"687.38062"	"2060.12729"	"2060.12572"	"0.76"	"0.00052"	"13/128"	"13"	"128"	"23640457.9226074"	"HCD"	"MS2"	"1.863804"	"170.1"	"30.220"	"72.3567"	"23938"	"23938"	"23921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"264.8"	""	"273.9"	""	"243.7"	""	"188.3"	""	"335.3"	"306.6"	""	"1237"	"40"	"37.000"	"30.000"	"0.00622787237184841"	"15"	"0.0001308"	"0.0002468"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPEPAEPWSFVK"	"[R].fAPPEPAEPWSFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.0556"	"0.0000"	"1"	"1"	"1"	"1030.56775"	"2060.12822"	"2060.12572"	"1.21"	"0.00125"	"7/116"	"7"	"116"	"662197.005981445"	"HCD"	"MS2"	"13.5286"	"46.4"	"100.000"	"72.4881"	"23991"	"23991"	"23969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.3"	""	"76.4"	""	"69.7"	""	"59.2"	""	"87.4"	"84.6"	""	"1236"	"18"	"37.000"	"30.000"	"1.04469249575554"	"14"	"0.0003839"	"0.00155"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSQGNTWLTAFVLK"	"[R].hSQGNTWLTAFVLk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"687.39349"	"2060.16593"	"2060.16932"	"-1.64"	"-0.00113"	"14/140"	"14"	"140"	"1711371.92712402"	"HCD"	"MS2"	"33.97265"	"77.3"	"100.000"	"62.4114"	"19938"	"19938"	"19907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.2"	""	"131.5"	""	"115.3"	""	"106.1"	"1.7"	"122.2"	"137.1"	""	"1046"	"27"	"37.000"	"30.000"	"0.095389745231317"	"15"	"0"	"3.298E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSQGNTWLTAFVLK"	"[R].hSQGNTWLTAFVLk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.39386"	"2060.16703"	"2060.16932"	"-1.11"	"-0.00076"	"14/140"	"14"	"140"	"3764435.77307129"	"HCD"	"MS2"	"11.39184"	"132.2"	"100.000"	"61.9987"	"19716"	"19716"	"19689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.6"	""	"269.2"	""	"175.3"	""	"221.1"	"0.3"	"167.2"	"195.1"	""	"1019"	"36"	"37.000"	"30.000"	"0.0126224653836416"	"15"	"0"	"1.77E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPNASPEELADMVAK"	"[R].TKMPNASPEELADMVAk.[H]"	"K17(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"1"	"2"	"2"	"0.1957"	"0.0000"	"1"	"1"	"1"	"1031.04089"	"2061.07451"	"2061.05578"	"9.09"	"0.00937"	"13/182"	"13"	"182"	"239126.87890625"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"64.9165"	"20961"	"20961"	"20931"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.2"	""	"22.7"	""	"20.5"	""	"24.9"	""	"33.3"	"35.4"	""	"1234"	"46"	"37.000"	"30.000"	"0.00145306540816384"	"17"	"0.008678"	"0.3797"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPNASPEELADMVAK"	"[R].TKMPNASPEELADMVAk.[H]"	"K17(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"1"	"3"	"3"	"0.2143"	"0.0000"	"1"	"1"	"1"	"687.69641"	"2061.07468"	"2061.05578"	"9.17"	"0.00630"	"14/182"	"14"	"182"	"2754251.72412109"	"HCD"	"MS2"	"12.03985"	"96.0"	"100.000"	"64.9373"	"20969"	"20969"	"20947"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.5"	""	"114.5"	""	"132.5"	""	"134.4"	""	"177.9"	"192.5"	""	"1232"	"42"	"37.000"	"30.000"	"0.00392266040879276"	"17"	"0.0009404"	"0.009787"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLWTPQVLSNGVQFSR"	"[K].vLWTPQVLSnGVQFSR.[V]"	"N-Term(TMT6plex); N10(Deamidated)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"687.71521"	"2061.13108"	"2061.13304"	"-0.95"	"-0.00065"	"8/162"	"8"	"162"	"902903.069152832"	"HCD"	"MS2"	"30.97175"	"43.1"	"100.000"	"74.7024"	"24895"	"24895"	"24865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.7"	""	"55.5"	""	"49.8"	""	"74.7"	"1.3"	"87.4"	"85.1"	""	"1136"	"7"	"37.000"	"30.000"	"12.4838440774178"	"13"	"0.0006737"	"0.006552"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFLITLDNSDPNLK"	"[R].iFLITLDNSDPNLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6P7A2"	"Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1"	"Q6P7A2"	"Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.73566"	"2061.19242"	"2061.19961"	"-3.49"	"-0.00240"	"9/126"	"9"	"126"	"495494.394287109"	"HCD"	"MS2"	"32.05037"	"30.0"	"100.000"	"78.7945"	"26605"	"26605"	"26575"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.3"	""	"40.8"	""	"42.2"	""	"56.9"	""	"56.6"	"53.5"	""	"821"	"10"	"36.000"	"29.000"	"4.05801045356673"	"16"	"0.0003839"	"0.002069"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLAYEPVWAIGTGK"	"[K].vVLAYEPVWAIGTGk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.9759"	"0.0000"	"1"	"1"	"1"	"1031.10901"	"2061.21074"	"2061.21487"	"-2.00"	"-0.00206"	"19/126"	"19"	"126"	"704267.414733887"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"77.0060"	"25875"	"25875"	"25845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.3"	""	"47.0"	""	"52.1"	""	"54.1"	"1.7"	"59.0"	"67.8"	""	"689"	"83"	"35.000"	"28.000"	"1.71865705929974E-07"	"20"	"0"	"6.474E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLAYEPVWAIGTGK"	"[K].vVLAYEPVWAIGTGk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"516.05841"	"2061.21181"	"2061.21487"	"-1.48"	"-0.00076"	"12/126"	"12"	"126"	"801372.466064453"	"HCD"	"MS2"	"4.709301"	"21.6"	"100.000"	"77.2055"	"25905"	"25905"	"25881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.7"	""	"29.3"	""	"33.7"	""	"38.6"	""	"34.7"	"42.8"	""	"701"	"44"	"35.000"	"28.000"	"0.00156202515063325"	"15"	"0"	"6.456E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLAYEPVWAIGTGK"	"[K].vVLAYEPVWAIGTGk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"687.74225"	"2061.21219"	"2061.21487"	"-1.30"	"-0.00089"	"19/126"	"19"	"126"	"4183378.6050415"	"HCD"	"MS2"	"7.793422"	"104.9"	"100.000"	"77.2874"	"25990"	"25990"	"25973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.3"	""	"128.5"	""	"150.7"	""	"168.3"	""	"177.7"	"221.1"	""	"701"	"62"	"35.000"	"28.000"	"2.20641917091448E-05"	"25"	"0"	"4.114E-07"	"1.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLAYEPVWAIGTGK"	"[K].vVLAYEPVWAIGTGk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"687.74237"	"2061.21256"	"2061.21487"	"-1.12"	"-0.00077"	"15/126"	"15"	"126"	"6587589.54315186"	"HCD"	"MS2"	"2.777077"	"154.9"	"100.000"	"76.9854"	"25866"	"25866"	"25845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"245.0"	""	"193.9"	""	"225.0"	""	"242.9"	""	"257.1"	"307.2"	""	"701"	"53"	"35.000"	"28.000"	"0.000163564112800158"	"23"	"0"	"3.941E-06"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLAYEPVWAIGTGK"	"[K].vVLAYEPVWAIGTGk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"1031.11035"	"2061.21343"	"2061.21487"	"-0.70"	"-0.00072"	"16/126"	"16"	"126"	"757770.185058594"	"HCD"	"MS2"	"0"	"39.0"	"100.000"	"77.0533"	"25843"	"25843"	"25817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.1"	""	"43.6"	""	"57.8"	""	"60.8"	"0.3"	"69.8"	"78.3"	""	"695"	"42"	"35.000"	"28.000"	"0.0024319509361079"	"19"	"0"	"2.789E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLAYEPVWAIGTGK"	"[K].vVLAYEPVWAIGTGk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"1031.11047"	"2061.21367"	"2061.21487"	"-0.58"	"-0.00060"	"15/126"	"15"	"126"	"231961.125366211"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"77.3012"	"25995"	"25995"	"25973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"18.1"	"2.0"	"18.6"	""	"16.2"	""	"25.4"	"29.6"	""	"695"	"57"	"35.000"	"28.000"	"6.65203933944826E-05"	"20"	"0"	"4.003E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLAYEPVWAIGTGK"	"[K].vVLAYEPVWAIGTGk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"1031.11084"	"2061.21440"	"2061.21487"	"-0.23"	"-0.00023"	"13/126"	"13"	"126"	"119146.006958008"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"77.3990"	"25984"	"25984"	"25961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"5.4"	""	"13.4"	""	"13.3"	""	"13.5"	"18.2"	""	"682"	"48"	"35.000"	"28.000"	"0.000503215927847079"	"19"	"0"	"4.01E-05"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLAYEPVWAIGTGK"	"[K].vVLAYEPVWAIGTGk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"687.74304"	"2061.21457"	"2061.21487"	"-0.14"	"-0.00010"	"15/126"	"15"	"126"	"2161123.40740967"	"HCD"	"MS2"	"20.64538"	"61.9"	"100.000"	"76.9682"	"25808"	"25808"	"25789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.2"	""	"74.3"	""	"81.3"	""	"101.8"	"2.0"	"105.1"	"123.2"	""	"682"	"55"	"35.000"	"28.000"	"9.74438375290856E-05"	"19"	"0"	"4.332E-06"	"1.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLAYEPVWAIGTGK"	"[K].vVLAYEPVWAIGTGk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"516.05933"	"2061.21547"	"2061.21487"	"0.29"	"0.00015"	"13/126"	"13"	"126"	"550034.322814941"	"HCD"	"MS2"	"17.36929"	"15.8"	"100.000"	"77.1950"	"25952"	"25952"	"25925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"23.0"	""	"22.3"	""	"27.6"	""	"27.7"	"28.7"	""	"682"	"35"	"35.000"	"28.000"	"0.0118237266004313"	"15"	"0"	"3.905E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLAYEPVWAIGTGK"	"[K].vVLAYEPVWAIGTGk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.74341"	"2061.21567"	"2061.21487"	"0.39"	"0.00027"	"19/126"	"19"	"126"	"7785655.87945557"	"HCD"	"MS2"	"0.6149643"	"168.2"	"90.033"	"77.2699"	"25931"	"25931"	"25913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"231.2"	""	"213.7"	""	"268.5"	""	"262.6"	""	"263.1"	"356.9"	""	"676"	"43"	"35.000"	"28.000"	"0.00161776971205052"	"15"	"0"	"1.247E-06"	"1.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTQSAEITIPVTFEAR"	"[K].aVTQSAEITIPVTFEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"688.05084"	"2062.13797"	"2062.13819"	"-0.10"	"-0.00007"	"16/178"	"16"	"178"	"2754516.74206543"	"HCD"	"MS2"	"43.4295"	"111.4"	"100.000"	"60.4634"	"19089"	"19089"	"19065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.6"	""	"146.6"	""	"151.6"	""	"170.9"	""	"231.2"	"230.9"	""	"1158"	"18"	"37.000"	"30.000"	"0.93902804637082"	"14"	"0"	"5.044E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTQSAEITIPVTFEAR"	"[K].aVTQSAEITIPVTFEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"688.05139"	"2062.13962"	"2062.13819"	"0.70"	"0.00048"	"14/178"	"14"	"178"	"2720076.08435059"	"HCD"	"MS2"	"33.17559"	"107.1"	"100.000"	"60.6037"	"19200"	"19200"	"19171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.6"	"2.6"	"142.5"	""	"146.5"	""	"169.6"	""	"210.0"	"225.7"	""	"1143"	"23"	"37.000"	"30.000"	"0.265470479789802"	"14"	"0"	"2.352E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPFMFGVLQPNTK"	"[K].ePPFMFGVLQPNTk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"688.38379"	"2063.13681"	"2063.13999"	"-1.54"	"-0.00106"	"10/136"	"10"	"136"	"1846013.08129883"	"HCD"	"MS2"	"10.75451"	"64.7"	"100.000"	"70.7548"	"23335"	"23335"	"23306"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.1"	""	"83.5"	""	"92.2"	""	"94.8"	""	"130.8"	"127.0"	""	"1177"	"31"	"37.000"	"30.000"	"0.0476152936666478"	"15"	"7.476E-05"	"0.0001877"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPFMFGVLQPNTK"	"[K].ePPFMFGVLQPNTk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"Q7TP48"	"Adipocyte plasma membrane-associated protein OS=Rattus norvegicus OX=10116 GN=Apmap PE=2 SV=2"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"688.38397"	"2063.13736"	"2063.13999"	"-1.27"	"-0.00088"	"10/136"	"10"	"136"	"1822121.58850098"	"HCD"	"MS2"	"30.75638"	"62.1"	"100.000"	"70.8623"	"23327"	"23327"	"23299"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.7"	""	"81.7"	""	"98.6"	""	"91.8"	""	"111.3"	"127.3"	""	"1172"	"31"	"37.000"	"30.000"	"0.0474130196918532"	"15"	"0"	"2.379E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPVEVMPVFPDFK"	"[R].vTPVEVMPVFPDFk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V886"	"RNA polymerase II-associated factor 1 homolog OS=Rattus norvegicus OX=10116 GN=Paf1 PE=2 SV=1"	"Q4V886"	"RNA polymerase II-associated factor 1 homolog OS=Rattus norvegicus OX=10116 GN=Paf1 PE=2 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"688.39270"	"2063.16355"	"2063.16514"	"-0.77"	"-0.00053"	"13/124"	"13"	"124"	"856623.337463379"	"HCD"	"MS2"	"25.3879"	"30.8"	"100.000"	"80.5071"	"27303"	"27303"	"27279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.6"	""	"39.0"	""	"38.3"	""	"44.1"	"0.1"	"68.1"	"63.8"	""	"1096"	"38"	"37.000"	"30.000"	"0.00939248604514618"	"18"	"0.0001308"	"0.0002138"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPVEVMPVFPDFK"	"[R].vTPVEVMPVFPDFk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V886"	"RNA polymerase II-associated factor 1 homolog OS=Rattus norvegicus OX=10116 GN=Paf1 PE=2 SV=1"	"Q4V886"	"RNA polymerase II-associated factor 1 homolog OS=Rattus norvegicus OX=10116 GN=Paf1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"688.39337"	"2063.16556"	"2063.16514"	"0.20"	"0.00014"	"12/124"	"12"	"124"	"758238.05255127"	"HCD"	"MS2"	"23.84205"	"30.3"	"100.000"	"80.5239"	"27259"	"27259"	"27233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.6"	""	"37.8"	""	"41.5"	""	"47.6"	"0.4"	"54.9"	"68.0"	""	"1117"	"27"	"37.000"	"30.000"	"0.121625090785924"	"14"	"0"	"0.0001452"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEMMDLQHGSLFLK"	"[K].gEMMDLQHGSLFLk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"688.70496"	"2064.10031"	"2064.10222"	"-0.92"	"-0.00064"	"15/134"	"15"	"134"	"12663597.4967651"	"HCD"	"MS2"	"6.644255"	"317.6"	"68.216"	"57.0926"	"17770"	"17770"	"17749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"476.8"	""	"446.6"	""	"463.4"	""	"367.6"	""	"601.9"	"659.3"	""	"1361"	"28"	"38.000"	"31.000"	"0.107356446903041"	"22"	"0"	"3.955E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEMMDLQHGSLFLK"	"[K].gEMMDLQHGSLFLk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"688.70593"	"2064.10324"	"2064.10222"	"0.49"	"0.00034"	"15/134"	"15"	"134"	"10474532.9541626"	"HCD"	"MS2"	"7.819684"	"396.6"	"100.000"	"56.8850"	"17631"	"17631"	"17611"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"621.0"	""	"548.0"	""	"574.2"	""	"462.3"	""	"757.5"	"797.8"	""	"1348"	"28"	"38.000"	"31.000"	"0.105599022125289"	"17"	"0"	"2.194E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTTYALPSVSALVSALR"	"[K].aDTTYALPSVSALVSALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"1032.57898"	"2064.15068"	"2064.15384"	"-1.53"	"-0.00158"	"7/162"	"7"	"162"	"152643.250671387"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"85.7339"	"29378"	"29378"	"29352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"12.7"	""	"9.2"	""	"16.2"	""	"13.9"	"13.3"	""	"1147"	"36"	"37.000"	"30.000"	"0.0152944344410307"	"20"	"0"	"9.911E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTTYALPSVSALVSALR"	"[K].aDTTYALPSVSALVSALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.8302"	"0.0000"	"1"	"1"	"1"	"688.72211"	"2064.15177"	"2064.15384"	"-1.00"	"-0.00069"	"10/162"	"10"	"162"	"2781637.30328369"	"HCD"	"MS2"	"45.36028"	"21.8"	"100.000"	"85.8732"	"29434"	"29434"	"29416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.4"	""	"30.5"	""	"30.9"	""	"34.0"	""	"40.4"	"45.1"	""	"1135"	"53"	"37.000"	"30.000"	"0.000280521314865029"	"25"	"0"	"6.144E-06"	"1.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTTYALPSVSALVSALR"	"[K].aDTTYALPSVSALVSALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.6905"	"0.0000"	"1"	"1"	"1"	"688.72217"	"2064.15195"	"2064.15384"	"-0.91"	"-0.00063"	"16/162"	"16"	"162"	"2102486.92712402"	"HCD"	"MS2"	"20.50253"	"18.3"	"100.000"	"85.9464"	"29515"	"29515"	"29497"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"25.7"	""	"28.1"	""	"35.2"	""	"31.5"	"32.2"	""	"1135"	"42"	"37.000"	"30.000"	"0.00377542516144488"	"28"	"0"	"3.969E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTTYALPSVSALVSALR"	"[K].aDTTYALPSVSALVSALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1032.58032"	"2064.15337"	"2064.15384"	"-0.23"	"-0.00023"	"7/162"	"7"	"162"	"158309.293395996"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"85.8087"	"29460"	"29460"	"29437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.3"	""	"11.2"	""	"11.2"	""	"11.7"	""	"11.7"	"9.8"	""	"1120"	"28"	"37.000"	"30.000"	"0.0975411849099303"	"14"	"7.476E-05"	"0.0001977"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAATNALLNSLEFTK"	"[K].lAATNALLNSLEFTk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"1032.60767"	"2064.20806"	"2064.21051"	"-1.19"	"-0.00123"	"15/152"	"15"	"152"	"208814.090270996"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"79.0229"	"26698"	"26698"	"26671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.4"	""	"14.7"	""	"24.4"	""	"29.9"	""	"24.9"	"26.8"	""	"693"	"60"	"35.000"	"28.000"	"3.28626997533761E-05"	"25"	"0"	"1.739E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAATNALLNSLEFTK"	"[K].lAATNALLNSLEFTk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"688.74121"	"2064.20908"	"2064.21051"	"-0.69"	"-0.00048"	"18/152"	"18"	"152"	"1152047.70501709"	"HCD"	"MS2"	"6.07995"	"38.9"	"100.000"	"79.2005"	"26770"	"26770"	"26751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.2"	""	"46.5"	""	"52.8"	""	"63.8"	"2.1"	"77.6"	"79.2"	""	"680"	"57"	"35.000"	"28.000"	"6.15855631490665E-05"	"19"	"0"	"1.456E-06"	"1.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAATNALLNSLEFTK"	"[K].lAATNALLNSLEFTk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"688.74127"	"2064.20926"	"2064.21051"	"-0.61"	"-0.00042"	"15/152"	"15"	"152"	"507412.699401855"	"HCD"	"MS2"	"8.680662"	"26.5"	"100.000"	"79.3423"	"26777"	"26777"	"26753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.7"	""	"36.5"	""	"37.5"	""	"45.3"	""	"51.4"	"49.0"	""	"680"	"40"	"35.000"	"28.000"	"0.00338437841899519"	"20"	"0"	"1.684E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAATNALLNSLEFTK"	"[K].lAATNALLNSLEFTk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"688.74133"	"2064.20945"	"2064.21051"	"-0.52"	"-0.00036"	"16/152"	"16"	"152"	"1605205.21624756"	"HCD"	"MS2"	"11.31082"	"49.0"	"100.000"	"78.9030"	"26649"	"26649"	"26623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.7"	""	"63.9"	""	"66.8"	""	"91.5"	""	"91.2"	"92.1"	""	"680"	"49"	"35.000"	"28.000"	"0.00047805615820417"	"20"	"0"	"2.745E-06"	"1.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAATNALLNSLEFTK"	"[K].lAATNALLNSLEFTk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.9492"	"0.0000"	"1"	"1"	"1"	"688.74188"	"2064.21109"	"2064.21051"	"0.28"	"0.00019"	"16/152"	"16"	"152"	"2738975.91107178"	"HCD"	"MS2"	"1.190588"	"79.8"	"100.000"	"79.0194"	"26645"	"26645"	"26625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.8"	""	"94.5"	""	"101.8"	""	"151.0"	""	"166.4"	"142.6"	""	"669"	"59"	"35.000"	"28.000"	"4.52268272388486E-05"	"20"	"0"	"1.796E-06"	"1.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAATNALLNSLEFTK"	"[K].lAATNALLNSLEFTk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"1032.61084"	"2064.21440"	"2064.21051"	"1.88"	"0.00195"	"6/152"	"6"	"152"	"197062.527404785"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"79.0051"	"26640"	"26640"	"26609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.5"	""	"18.9"	""	"24.2"	""	"22.2"	""	"29.3"	"27.5"	""	"644"	"39"	"35.000"	"28.000"	"0.00378317012690528"	"18"	"0"	"0.0001519"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMTDPNVALTFLEK"	"[R].qMTDPNVALTFLEk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"689.05078"	"2065.13779"	"2065.14038"	"-1.26"	"-0.00086"	"14/150"	"14"	"150"	"995357.535827637"	"HCD"	"MS2"	"0"	"46.9"	"100.000"	"72.8065"	"24173"	"24173"	"24143"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.9"	""	"57.9"	""	"62.8"	""	"74.3"	""	"97.9"	"84.6"	""	"1163"	"52"	"37.000"	"30.000"	"0.000370296595407953"	"28"	"0"	"3.923E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMTDPNVALTFLEK"	"[R].qMTDPNVALTFLEk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"B0BN93"	"26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"689.05103"	"2065.13852"	"2065.14038"	"-0.90"	"-0.00062"	"14/150"	"14"	"150"	"1119521.65618896"	"HCD"	"MS2"	"29.40575"	"49.0"	"100.000"	"72.8938"	"24157"	"24157"	"24129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.6"	""	"56.1"	""	"70.4"	""	"78.5"	"1.8"	"97.2"	"90.2"	""	"1164"	"52"	"37.000"	"30.000"	"0.000402645625074821"	"29"	"0"	"3.669E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVGYTPDWIFLLR"	"[K].kVGYTPDWIFLLR.[N]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.41095"	"2066.21830"	"2066.22029"	"-0.96"	"-0.00066"	"11/124"	"11"	"124"	"1828111.70501709"	"HCD"	"MS2"	"20.24629"	"82.1"	"100.000"	"73.4112"	"24419"	"24419"	"24399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"123.9"	""	"124.5"	""	"134.6"	""	"142.9"	""	"121.5"	"132.4"	""	"559"	"19"	"34.000"	"27.000"	"0.37964860832111"	"14"	"7.476E-05"	"0.0001945"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVGYTPDWIFLLR"	"[K].kVGYTPDWIFLLR.[N]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.41162"	"2066.22031"	"2066.22029"	"0.01"	"0.00001"	"6/124"	"6"	"124"	"1672410.3572998"	"HCD"	"MS2"	"2.11251"	"76.2"	"100.000"	"73.4360"	"24378"	"24378"	"24353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.9"	""	"116.3"	""	"119.5"	""	"126.8"	""	"118.8"	"140.6"	""	"545"	"32"	"34.000"	"27.000"	"0.0157168861274388"	"15"	"0"	"4.344E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDHKFDLMYAK"	"[R].lDHkFDLMYAk.[R]"	"N-Term(TMT6plex); K4(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"517.80151"	"2068.18422"	"2068.18683"	"-1.26"	"-0.00065"	"6/102"	"6"	"102"	"10372147.6400146"	"HCD"	"MS2"	"0"	"234.6"	"100.000"	"48.2292"	"14123"	"14123"	"14096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"636.6"	""	"368.4"	""	"376.5"	""	"232.7"	"1.2"	"291.5"	"299.4"	""	"817"	"20"	"36.000"	"29.000"	"0.430717047175829"	"14"	"0"	"0.0001163"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDHKFDLMYAK"	"[R].lDHkFDLMYAk.[R]"	"N-Term(TMT6plex); K4(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"1"	"4"	"4"	"0.9524"	"0.0000"	"1"	"1"	"1"	"517.80206"	"2068.18642"	"2068.18683"	"-0.20"	"-0.00010"	"6/102"	"6"	"102"	"9871125.26165771"	"HCD"	"MS2"	"0"	"222.2"	"100.000"	"48.4971"	"14280"	"14280"	"14255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"640.3"	""	"348.3"	""	"341.8"	""	"215.6"	"0.4"	"278.3"	"263.7"	""	"814"	"21"	"36.000"	"29.000"	"0.348012152144066"	"14"	"0"	"0.0001133"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFITDDFHDMMPK"	"[R].vFITDDFHDMmPk.[Y]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.2414"	"0.0000"	"1"	"1"	"1"	"690.68646"	"2070.04483"	"2070.04404"	"0.38"	"0.00026"	"10/106"	"10"	"106"	"1932905.08032227"	"HCD"	"MS2"	"16.87453"	"99.2"	"100.000"	"54.5322"	"16670"	"16670"	"16640"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"126.1"	""	"136.6"	""	"149.1"	""	"131.2"	""	"198.0"	"200.6"	""	"1110"	"29"	"37.000"	"30.000"	"0.0687532105524355"	"20"	"0.0001308"	"0.0003125"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFITDDFHDMMPK"	"[R].vFITDDFHDMmPk.[Y]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.1842"	"0.0000"	"1"	"1"	"1"	"690.68677"	"2070.04575"	"2070.04404"	"0.83"	"0.00057"	"12/106"	"12"	"106"	"2546080.1762085"	"HCD"	"MS2"	"25.24247"	"102.6"	"100.000"	"54.6306"	"16763"	"16763"	"16741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.7"	""	"131.9"	""	"131.5"	""	"150.6"	""	"225.2"	"199.6"	""	"1123"	"38"	"37.000"	"30.000"	"0.00847910006563169"	"19"	"0.0001308"	"0.0002189"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPATFWVNPQFK"	"[R].nYPATFWVNPQFk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"690.71124"	"2070.11917"	"2070.12130"	"-1.03"	"-0.00071"	"14/120"	"14"	"120"	"2203250.46624756"	"HCD"	"MS2"	"0"	"65.8"	"100.000"	"67.1010"	"21848"	"21848"	"21833"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.8"	""	"91.6"	""	"92.5"	""	"114.5"	""	"97.4"	"123.2"	""	"1113"	"46"	"37.000"	"30.000"	"0.00129558278489058"	"20"	"0"	"2.877E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPATFWVNPQFK"	"[R].nYPATFWVNPQFk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"690.71185"	"2070.12101"	"2070.12130"	"-0.14"	"-0.00010"	"12/120"	"12"	"120"	"2179407.89190674"	"HCD"	"MS2"	"33.94005"	"70.2"	"100.000"	"67.2305"	"21851"	"21851"	"21835"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.0"	""	"84.4"	""	"93.9"	""	"116.4"	"1.5"	"115.8"	"132.1"	""	"1113"	"41"	"37.000"	"30.000"	"0.00472568934357709"	"22"	"0"	"2.683E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFDVFNALDLMENK"	"[K].gFDVFNALDLMENk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"691.03564"	"2071.09238"	"2071.09343"	"-0.51"	"-0.00035"	"12/138"	"12"	"138"	"243007.489257813"	"HCD"	"MS2"	"59.16538"	"9.1"	"100.000"	"90.8184"	"31361"	"31361"	"31354"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"11.5"	""	"11.6"	""	"16.7"	""	"17.3"	"16.5"	""	"1226"	"31"	"37.000"	"30.000"	"0.0448188258175335"	"19"	"0.0001308"	"0.0002082"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPATFWVNPQFK"	"[R].nYPATFWVnPQFk.[I]"	"N-Term(TMT6plex); N9(Deamidated); K13(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"691.04449"	"2071.11893"	"2071.10532"	"6.57"	"0.00454"	"10/120"	"10"	"120"	"2294341.22808838"	"HCD"	"MS2"	"41.20333"	"69.4"	"100.000"	"67.1653"	"21873"	"21873"	"21862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.5"	""	"95.6"	""	"93.8"	""	"106.5"	""	"118.6"	"133.0"	""	"1222"	"28"	"37.000"	"30.000"	"0.107162098662532"	"18"	"0.0001308"	"0.0002266"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPATFWVNPQFK"	"[R].nYPATFWVnPQFk.[I]"	"N-Term(TMT6plex); N9(Deamidated); K13(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"3"	"3"	"0.4643"	"0.0000"	"1"	"1"	"1"	"691.04559"	"2071.12223"	"2071.10532"	"8.16"	"0.00564"	"11/120"	"11"	"120"	"1434455.27130127"	"HCD"	"MS2"	"30.78816"	"47.7"	"100.000"	"67.3839"	"21909"	"21909"	"21897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.7"	""	"51.5"	""	"68.6"	""	"82.9"	""	"94.0"	"84.7"	""	"1210"	"28"	"37.000"	"30.000"	"0.08585298006219"	"14"	"0.0001889"	"0.0009178"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYYMSAGLQPVPIVFR"	"[K].tYYMSAGLQPVPIVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.04578"	"2071.12278"	"2071.12478"	"-0.97"	"-0.00067"	"20/142"	"20"	"142"	"2791908.8927002"	"HCD"	"MS2"	"5.98377"	"37.4"	"100.000"	"73.0326"	"24265"	"24265"	"24239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.5"	""	"42.3"	""	"48.9"	""	"60.3"	"1.8"	"77.7"	"77.2"	""	"1211"	"57"	"37.000"	"30.000"	"0.000114581406108953"	"16"	"0"	"3.633E-06"	"1.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYYMSAGLQPVPIVFR"	"[K].tYYMSAGLQPVPIVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1036.06519"	"2071.12309"	"2071.12478"	"-0.82"	"-0.00085"	"18/142"	"18"	"142"	"250143.692993164"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"73.0441"	"24270"	"24270"	"24239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.2"	""	"18.8"	""	"17.1"	""	"13.3"	""	"20.6"	"22.8"	""	"1213"	"80"	"37.000"	"30.000"	"6.75819634623385E-07"	"18"	"0"	"8.103E-06"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYYMSAGLQPVPIVFR"	"[K].tYYMSAGLQPVPIVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1036.06580"	"2071.12432"	"2071.12478"	"-0.23"	"-0.00023"	"9/142"	"9"	"142"	"246546.501464844"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"73.0922"	"24238"	"24238"	"24209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.1"	""	"19.9"	""	"20.9"	""	"14.0"	"2.0"	"18.9"	"25.6"	""	"1203"	"45"	"37.000"	"30.000"	"0.00183330883626123"	"15"	"0"	"5.732E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYYMSAGLQPVPIVFR"	"[K].tYYMSAGLQPVPIVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.04639"	"2071.12461"	"2071.12478"	"-0.09"	"-0.00006"	"15/142"	"15"	"142"	"2748473.2600708"	"HCD"	"MS2"	"2.801072"	"37.9"	"100.000"	"73.1110"	"24245"	"24245"	"24225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.4"	""	"50.9"	""	"51.8"	""	"63.5"	""	"76.0"	"67.2"	""	"1206"	"52"	"37.000"	"30.000"	"0.000403011382293875"	"16"	"0"	"4.464E-06"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSIFSNLIGQLDYK"	"[R].dSIFSNLIGQLDYk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.05377"	"2071.14676"	"2071.14758"	"-0.39"	"-0.00027"	"11/142"	"11"	"142"	"420896.268005371"	"HCD"	"MS2"	"28.04285"	"20.2"	"100.000"	"84.7769"	"28993"	"28993"	"28971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.5"	""	"18.8"	""	"29.0"	""	"29.6"	""	"38.1"	"44.3"	""	"1153"	"23"	"37.000"	"30.000"	"0.31031252962064"	"14"	"0"	"0.000152"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSIFSNLIGQLDYK"	"[R].dSIFSNLIGQLDYk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.05377"	"2071.14676"	"2071.14758"	"-0.39"	"-0.00027"	"10/142"	"10"	"142"	"461779.955505371"	"HCD"	"MS2"	"46.37859"	"20.4"	"100.000"	"84.9029"	"29095"	"29095"	"29074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.9"	""	"24.4"	""	"22.6"	""	"35.6"	""	"38.9"	"46.5"	""	"1153"	"21"	"37.000"	"30.000"	"0.429337982956802"	"14"	"0.0001308"	"0.0002883"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGNKATFSPIVTVEPR"	"[K].iLGNKATFSPIVTVEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"1"	"3"	"3"	"0.4727"	"0.0000"	"1"	"1"	"1"	"691.06293"	"2071.17423"	"2071.21129"	"-17.89"	"-0.01235"	"17/170"	"17"	"170"	"1834830.79754639"	"HCD"	"MS2"	"5.234541"	"54.5"	"100.000"	"66.3355"	"21487"	"21487"	"21465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.5"	""	"68.4"	""	"69.2"	""	"84.0"	"0.1"	"102.1"	"118.3"	""	"986"	"55"	"36.000"	"29.000"	"0.000173718839423946"	""	"0"	"7.023E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGNKATFSPIVTVEPR"	"[K].iLGNKATFSPIVTVEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"1"	"3"	"3"	"0.4468"	"0.0000"	"1"	"1"	"1"	"691.06299"	"2071.17441"	"2071.21129"	"-17.81"	"-0.01229"	"16/170"	"16"	"170"	"2244936.8104248"	"HCD"	"MS2"	"8.124658"	"58.8"	"100.000"	"66.2265"	"21495"	"21495"	"21475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.8"	""	"65.3"	""	"84.4"	""	"97.0"	"0.7"	"110.1"	"113.1"	""	"986"	"47"	"36.000"	"29.000"	"0.00101823241681459"	""	"0.0001889"	"0.0004469"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGIQAQMVTTDFQK"	"[R].fGIQAQMVTTDFQk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"691.38025"	"2072.12619"	"2072.12507"	"0.54"	"0.00038"	"13/128"	"13"	"128"	"2179410.7578125"	"HCD"	"MS2"	"33.2551"	"92.2"	"100.000"	"62.4392"	"19949"	"19949"	"19923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.5"	""	"129.0"	""	"138.7"	""	"145.6"	""	"158.7"	"158.9"	""	"1252"	"32"	"37.000"	"30.000"	"0.0356101934708244"	"24"	"0"	"9.089E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEYLASIFGTEKDK"	"[M].aEYLASIFGTEkDk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q7TP17"	"Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1"	"Q7TP17"	"Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"691.38239"	"2072.13260"	"2072.13159"	"0.49"	"0.00034"	"7/130"	"7"	"130"	"435592.989318848"	"HCD"	"MS2"	"22.035"	"19.0"	"100.000"	"82.3929"	"28072"	"28072"	"28046"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.4"	""	"27.3"	""	"30.7"	""	"30.5"	""	"28.7"	"34.3"	""	"1219"	"8"	"37.000"	"30.000"	"8.85062030919728"	"14"	"0.0006737"	"0.00664"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAFLNVQAAEEALPK"	"[R].lAFLNVQAAEEALPk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"691.40887"	"2072.21207"	"2072.21560"	"-1.70"	"-0.00118"	"14/134"	"14"	"134"	"1084695.27679443"	"HCD"	"MS2"	"12.97259"	"34.5"	"100.000"	"76.3338"	"25606"	"25606"	"25583"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.0"	""	"37.2"	""	"41.5"	""	"68.7"	""	"71.4"	"71.8"	""	"650"	"34"	"35.000"	"28.000"	"0.0144838280729189"	"22"	"0"	"1.439E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAFLNVQAAEEALPK"	"[R].lAFLNVQAAEEALPk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"691.40936"	"2072.21354"	"2072.21560"	"-1.00"	"-0.00069"	"16/134"	"16"	"134"	"1526556.67602539"	"HCD"	"MS2"	"3.627153"	"44.5"	"100.000"	"76.4655"	"25609"	"25609"	"25585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.7"	""	"48.6"	""	"59.5"	""	"90.1"	""	"98.6"	"83.3"	""	"647"	"41"	"35.000"	"28.000"	"0.00256374180410433"	"23"	"0"	"5.137E-06"	"1.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLEVLQLFPINIK"	"[R].sTLEVLQLFPINIk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"691.76196"	"2073.27134"	"2073.27238"	"-0.51"	"-0.00035"	"6/124"	"6"	"124"	"90330.8929443359"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"92.8938"	"32061"	"32061"	"32055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	"5.0"	""	"5.3"	""	"7.6"	""	"5.0"	"10.1"	""	"340"	"13"	"32.000"	"25.000"	"0.780636621822677"	"16"	"0.0008731"	"0.009583"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLEVLQLFPINIK"	"[R].sTLEVLQLFPINIk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"691.76221"	"2073.27207"	"2073.27238"	"-0.15"	"-0.00011"	"9/124"	"9"	"124"	"98143.7031860352"	"HCD"	"MS2"	"6.702359"	"3.5"	"100.000"	"92.7177"	"31977"	"31977"	"31970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.0"	""	"3.2"	""	"6.5"	""	"7.2"	""	"4.9"	"7.9"	""	"340"	"17"	"32.000"	"25.000"	"0.352735297967335"	"17"	"0.0001889"	"0.0005952"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDPFTIKPLDK"	"[R].vLDPFTIkPLDk.[K]"	"N-Term(TMT6plex); K8(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.76868"	"2073.29148"	"2073.29267"	"-0.58"	"-0.00040"	"7/112"	"7"	"112"	"45131375.6772461"	"HCD"	"MS2"	"23.79932"	"312.7"	"12.571"	"64.3749"	"20740"	"20740"	"20723"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"427.6"	""	"394.1"	""	"432.4"	""	"553.1"	""	"557.7"	"604.0"	""	"260"	"6"	"31.000"	"24.000"	"3.0545226671028"	"13"	"0.0001889"	"0.0004267"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDPFTIKPLDK"	"[R].vLDPFTIkPLDk.[K]"	"N-Term(TMT6plex); K8(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.76953"	"2073.29404"	"2073.29267"	"0.66"	"0.00046"	"13/112"	"13"	"112"	"42828090.1572266"	"HCD"	"MS2"	"20.47603"	"371.0"	"15.283"	"64.3626"	"20682"	"20682"	"20665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"493.1"	""	"451.4"	""	"513.9"	""	"673.3"	""	"670.8"	"722.4"	""	"229"	"10"	"30.000"	"23.000"	"1.13711787544197"	"13"	"7.476E-05"	"0.0002044"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDPLIIPTDYWK"	"[R].vGVDPLIIPTDYWk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"1037.60217"	"2074.19707"	"2074.19888"	"-0.88"	"-0.00091"	"14/118"	"14"	"118"	"311139.09942627"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"81.3403"	"27643"	"27643"	"27614"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.3"	""	"32.7"	""	"31.9"	""	"27.9"	""	"38.7"	"32.5"	""	"846"	"45"	"36.000"	"29.000"	"0.00138784308986849"	"21"	"0"	"6.331E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDPLIIPTDYWK"	"[R].vGVDPLIIPTDYWk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.07092"	"2074.19822"	"2074.19888"	"-0.32"	"-0.00022"	"9/118"	"9"	"118"	"341987.089355469"	"HCD"	"MS2"	"4.26416"	"15.8"	"100.000"	"81.7213"	"27798"	"27798"	"27774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.6"	""	"21.0"	""	"25.7"	""	"24.0"	""	"33.2"	"25.7"	""	"839"	"14"	"36.000"	"29.000"	"1.79362630740591"	"13"	"0.0001889"	"0.0004032"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDPLIIPTDYWK"	"[R].vGVDPLIIPTDYWk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"1037.60278"	"2074.19829"	"2074.19888"	"-0.29"	"-0.00030"	"12/118"	"12"	"118"	"294388.443969727"	"HCD"	"MS2"	"0"	"18.5"	"100.000"	"81.3498"	"27596"	"27596"	"27568"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.9"	""	"27.1"	""	"24.0"	""	"29.2"	""	"29.4"	"28.2"	""	"829"	"42"	"36.000"	"29.000"	"0.00236877894900489"	"16"	"0"	"3.134E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDPLIIPTDYWK"	"[R].vGVDPLIIPTDYWk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.07098"	"2074.19840"	"2074.19888"	"-0.23"	"-0.00016"	"13/118"	"13"	"118"	"2974456.67041016"	"HCD"	"MS2"	"0"	"79.2"	"100.000"	"81.3890"	"27663"	"27663"	"27646"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.7"	""	"122.6"	""	"109.4"	""	"114.2"	""	"144.3"	"148.6"	""	"829"	"34"	"36.000"	"29.000"	"0.0159780779252462"	"15"	"0"	"2.492E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDPLIIPTDYWK"	"[R].vGVDPLIIPTDYWk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.07123"	"2074.19913"	"2074.19888"	"0.12"	"0.00008"	"14/118"	"14"	"118"	"2918670.41748047"	"HCD"	"MS2"	"0"	"80.7"	"100.000"	"81.3659"	"27602"	"27602"	"27584"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.0"	""	"123.8"	""	"122.5"	""	"117.5"	""	"156.1"	"133.7"	""	"816"	"32"	"36.000"	"29.000"	"0.0248119080521717"	"15"	"0"	"4.881E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"1038.05835"	"2075.10942"	"2075.11350"	"-1.96"	"-0.00204"	"13/128"	"13"	"128"	"510094.406677246"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"68.2867"	"22276"	"22276"	"22250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.8"	""	"54.6"	""	"55.1"	""	"42.7"	""	"75.2"	"85.2"	""	"1296"	"51"	"38.000"	"31.000"	"0.000555360523709279"	"21"	"0"	"0.0001273"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"692.37512"	"2075.11081"	"2075.11350"	"-1.29"	"-0.00090"	"16/128"	"16"	"128"	"31651806.2636719"	"HCD"	"MS2"	"0.4058008"	"163.0"	"22.373"	"68.4560"	"22396"	"22396"	"22378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"257.9"	""	"221.5"	""	"237.1"	""	"176.6"	""	"322.7"	"332.3"	""	"1261"	"34"	"37.000"	"31.000"	"0.0277130988533548"	"17"	"0"	"2.374E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"692.37543"	"2075.11173"	"2075.11350"	"-0.85"	"-0.00059"	"15/128"	"15"	"128"	"29337487.8493652"	"HCD"	"MS2"	"5.903966"	"179.8"	"26.494"	"68.6165"	"22411"	"22411"	"22394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.6"	""	"253.9"	""	"260.3"	""	"194.2"	"1.3"	"336.7"	"366.9"	""	"1252"	"44"	"37.000"	"30.000"	"0.00250365413350447"	"18"	"0"	"1.987E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"1038.05957"	"2075.11186"	"2075.11350"	"-0.79"	"-0.00082"	"20/128"	"20"	"128"	"2237348.05407715"	"HCD"	"MS2"	"0"	"145.4"	"100.000"	"68.4610"	"22398"	"22398"	"22378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.1"	""	"205.4"	""	"203.9"	""	"167.9"	""	"271.8"	"290.5"	""	"1251"	"53"	"37.000"	"30.000"	"0.000335140809274595"	"17"	"0"	"2.819E-06"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"1038.05969"	"2075.11211"	"2075.11350"	"-0.67"	"-0.00070"	"9/128"	"9"	"128"	"749429.161682129"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"68.1584"	"22275"	"22275"	"22250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.2"	""	"73.6"	""	"72.6"	""	"64.9"	""	"102.3"	"111.1"	""	"1232"	"51"	"37.000"	"30.000"	"0.000508839376939542"	"18"	"0"	"6.698E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"1038.05981"	"2075.11235"	"2075.11350"	"-0.55"	"-0.00057"	"9/128"	"9"	"128"	"187519.092956543"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"68.9185"	"22534"	"22534"	"22506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.7"	""	"19.7"	""	"19.6"	""	"19.6"	"1.4"	"27.1"	"28.7"	""	"1248"	"18"	"37.000"	"30.000"	"1.09694433511022"	"14"	"0.0004166"	"0.002154"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"1038.06018"	"2075.11308"	"2075.11350"	"-0.20"	"-0.00021"	"19/128"	"19"	"128"	"2296823.63677979"	"HCD"	"MS2"	"0"	"161.7"	"100.000"	"68.5840"	"22397"	"22397"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"252.5"	""	"231.3"	""	"230.7"	""	"180.6"	""	"313.3"	"324.8"	""	"1245"	"53"	"37.000"	"30.000"	"0.000304186093690914"	"18"	"0"	"1.248E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"692.37598"	"2075.11338"	"2075.11350"	"-0.06"	"-0.00004"	"15/128"	"15"	"128"	"8390154.34197998"	"HCD"	"MS2"	"7.079785"	"199.4"	"100.000"	"68.1378"	"22267"	"22267"	"22250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"306.2"	""	"272.5"	""	"279.5"	""	"246.3"	""	"382.9"	"408.9"	""	"1238"	"37"	"37.000"	"30.000"	"0.0128437146730459"	"16"	"0"	"1.145E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"692.37616"	"2075.11393"	"2075.11350"	"0.21"	"0.00014"	"14/128"	"14"	"128"	"2520834.63305664"	"HCD"	"MS2"	"2.242526"	"74.0"	"100.000"	"68.9440"	"22544"	"22544"	"22522"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.7"	""	"106.1"	""	"105.6"	""	"84.0"	""	"138.8"	"143.6"	""	"1244"	"30"	"37.000"	"30.000"	"0.0635024358866177"	"16"	"0"	"2.072E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"1038.06091"	"2075.11455"	"2075.11350"	"0.51"	"0.00052"	"9/128"	"9"	"128"	"135765.333496094"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"68.7994"	"22537"	"22537"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.6"	""	"10.8"	""	"12.8"	""	"13.1"	""	"18.1"	"20.9"	""	"1241"	"20"	"37.000"	"30.000"	"0.614811221805963"	"16"	"0.0006037"	"0.003684"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"692.37640"	"2075.11466"	"2075.11350"	"0.56"	"0.00039"	"13/128"	"13"	"128"	"2533128.55926514"	"HCD"	"MS2"	"5.217927"	"77.0"	"100.000"	"68.7765"	"22527"	"22527"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.5"	""	"113.3"	""	"99.6"	""	"91.9"	""	"150.1"	"154.0"	""	"1245"	"40"	"37.000"	"30.000"	"0.00616792885695748"	"16"	"0"	"2.49E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"692.37708"	"2075.11667"	"2075.11350"	"1.53"	"0.00106"	"11/128"	"11"	"128"	"8725623.55584717"	"HCD"	"MS2"	"14.15439"	"220.0"	"100.000"	"68.3096"	"22285"	"22285"	"22266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.6"	""	"292.6"	""	"294.7"	""	"265.9"	""	"417.8"	"441.7"	""	"1245"	"60"	"37.000"	"30.000"	"5.75624613276544E-05"	"22"	"0"	"2.55E-06"	"1.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPSLLTHNENMVAK"	"[K].fPSLLTHNENmVAk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K14(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"692.38184"	"2075.13095"	"2075.13597"	"-2.42"	"-0.00167"	"13/128"	"13"	"128"	"1797129.54772949"	"HCD"	"MS2"	"14.66075"	"95.2"	"100.000"	"43.3966"	"12153"	"12153"	"12127"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.1"	""	"92.6"	""	"124.9"	""	"207.6"	""	"176.1"	"185.8"	""	"1207"	"31"	"37.000"	"30.000"	"0.0487166340755174"	"24"	"0.0001308"	"0.00022"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPSLLTHNENMVAK"	"[K].fPSLLTHNENmVAk.[V]"	"N-Term(TMT6plex); M11(Oxidation); K14(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"692.38306"	"2075.13462"	"2075.13597"	"-0.65"	"-0.00045"	"13/128"	"13"	"128"	"2255627.67077637"	"HCD"	"MS2"	"54.30732"	"109.4"	"100.000"	"43.6032"	"12286"	"12286"	"12258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.9"	""	"127.0"	""	"143.8"	""	"242.0"	"2.1"	"211.1"	"185.9"	""	"1212"	"28"	"37.000"	"30.000"	"0.0898405959598447"	"22"	"0.0001889"	"0.0005957"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALELLTQEFGIPVER"	"[K].mALELLTQEFGIPVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.38574"	"2075.14267"	"2075.14083"	"0.89"	"0.00061"	"7/158"	"7"	"158"	"150030.167419434"	"HCD"	"MS2"	"46.20262"	"2.4"	"100.000"	"95.3677"	"32838"	"32838"	"32834"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.3"	""	"3.0"	""	"3.5"	""	"2.7"	""	"4.3"	"7.4"	""	"1148"	"20"	"37.000"	"30.000"	"0.579311156608017"	"14"	"0.0001889"	"0.000577"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEPELFQTVAEGLR"	"[K].kEPELFQTVAEGLR.[Q]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.40295"	"2075.19431"	"2075.19011"	"2.02"	"0.00140"	"11/148"	"11"	"148"	"2007926.75231934"	"HCD"	"MS2"	"0"	"93.1"	"100.000"	"54.5224"	"16719"	"16719"	"16696"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.2"	""	"101.9"	""	"120.8"	""	"170.9"	""	"190.6"	"165.6"	""	"855"	"33"	"36.000"	"29.000"	"0.0198580280157726"	"15"	"0"	"1.153E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSGVKPSGLQVSTTR"	"[K].vTSGVkPSGLQVSTTR.[Q]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.41107"	"2075.21866"	"2075.22247"	"-1.84"	"-0.00127"	"14/166"	"14"	"166"	"2345201.68804932"	"HCD"	"MS2"	"5.254258"	"128.4"	"100.000"	"34.7308"	"8615"	"8615"	"8590"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.9"	""	"130.7"	""	"137.6"	""	"252.1"	""	"285.5"	"277.2"	""	"695"	"14"	"35.000"	"28.000"	"1.2792481834078"	"13"	"0"	"0.0001365"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSGVKPSGLQVSTTR"	"[K].vTSGVkPSGLQVSTTR.[Q]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.41187"	"2075.22104"	"2075.22247"	"-0.69"	"-0.00048"	"15/166"	"15"	"166"	"2876565.11047363"	"HCD"	"MS2"	"2.920635"	"149.2"	"100.000"	"34.7675"	"8673"	"8673"	"8650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.0"	""	"148.9"	""	"170.9"	""	"306.9"	""	"318.4"	"306.7"	""	"675"	"12"	"35.000"	"28.000"	"2.2144902737723"	"13"	"0"	"8.489E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLAPQISGLYLPYK"	"[R].gPLAPQISGLYLPYk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"692.41467"	"2075.22947"	"2075.23052"	"-0.51"	"-0.00035"	"12/130"	"12"	"130"	"4298279.28601074"	"HCD"	"MS2"	"26.45721"	"104.7"	"100.000"	"72.1790"	"23865"	"23865"	"23841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.3"	""	"127.1"	""	"124.8"	""	"174.2"	"2.2"	"221.8"	"203.4"	""	"628"	"14"	"34.000"	"27.000"	"1.13482696868839"	"16"	"0"	"0.000183"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLAPQISGLYLPYK"	"[R].gPLAPQISGLYLPYk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"692.41498"	"2075.23038"	"2075.23052"	"-0.07"	"-0.00005"	"7/130"	"7"	"130"	"2170713.50134277"	"HCD"	"MS2"	"22.67134"	"60.4"	"100.000"	"72.0396"	"23859"	"23859"	"23839"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.2"	""	"54.8"	""	"62.7"	""	"120.3"	"2.1"	"143.0"	"135.1"	""	"611"	"55"	"34.000"	"27.000"	"9.75014814733282E-05"	"22"	"0"	"6.407E-06"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.42114"	"2075.24887"	"2075.25165"	"-1.34"	"-0.00092"	"17/136"	"17"	"136"	"9697088.41619873"	"HCD"	"MS2"	"1.410135"	"147.4"	"76.743"	"80.1750"	"27168"	"27168"	"27151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.5"	""	"218.6"	""	"245.4"	""	"226.6"	""	"260.0"	"287.2"	""	"497"	"48"	"33.000"	"26.000"	"0.000385768171974583"	"16"	"0"	"2.241E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1038.12817"	"2075.24907"	"2075.25165"	"-1.24"	"-0.00129"	"12/136"	"12"	"136"	"166138.645935059"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"79.9646"	"27082"	"27082"	"27055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.5"	""	"14.1"	""	"16.9"	""	"19.4"	""	"15.5"	"14.2"	""	"493"	"39"	"33.000"	"26.000"	"0.0031536749147483"	"15"	"0.0001308"	"0.0002478"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"692.42139"	"2075.24961"	"2075.25165"	"-0.98"	"-0.00068"	"12/136"	"12"	"136"	"352019.745361328"	"HCD"	"MS2"	"14.19079"	"18.0"	"100.000"	"77.4105"	"25989"	"25989"	"25961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.3"	""	"23.9"	""	"22.9"	""	"32.3"	""	"39.5"	"32.7"	""	"493"	"44"	"33.000"	"26.000"	"0.000894987405008301"	"17"	"0"	"9.218E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9636"	"0.0000"	"1"	"1"	"1"	"692.42157"	"2075.25016"	"2075.25165"	"-0.72"	"-0.00050"	"17/136"	"17"	"136"	"1577151.4833374"	"HCD"	"MS2"	"4.625456"	"38.5"	"100.000"	"80.4932"	"27297"	"27297"	"27279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.5"	""	"60.7"	""	"66.1"	""	"59.1"	""	"61.4"	"81.6"	""	"495"	"55"	"33.000"	"26.000"	"7.10518194051111E-05"	"18"	"0"	"3.237E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.42157"	"2075.25016"	"2075.25165"	"-0.72"	"-0.00050"	"12/136"	"12"	"136"	"916059.24609375"	"HCD"	"MS2"	"40.43202"	"25.8"	"100.000"	"79.8839"	"27049"	"27049"	"27023"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.2"	""	"42.3"	""	"48.0"	""	"42.2"	""	"44.1"	"46.2"	""	"495"	"42"	"33.000"	"26.000"	"0.00146074767342531"	"15"	"0"	"6.614E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.42163"	"2075.25034"	"2075.25165"	"-0.63"	"-0.00044"	"12/136"	"12"	"136"	"594477.720153809"	"HCD"	"MS2"	"2.167339"	"19.8"	"100.000"	"80.6277"	"27301"	"27301"	"27281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.0"	""	"26.9"	""	"35.1"	""	"29.3"	""	"35.9"	"40.5"	""	"495"	"36"	"33.000"	"26.000"	"0.00604749061791758"	"15"	"0.0001859"	"0.0003283"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1038.12891"	"2075.25054"	"2075.25165"	"-0.54"	"-0.00056"	"11/136"	"11"	"136"	"219729.164306641"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"80.0254"	"27056"	"27056"	"27025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.8"	""	"21.0"	""	"22.1"	""	"15.9"	""	"22.1"	"27.9"	""	"495"	"40"	"33.000"	"26.000"	"0.00257973563774843"	"15"	"0.0001308"	"0.000218"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9804"	"0.0000"	"1"	"1"	"1"	"692.42175"	"2075.25071"	"2075.25165"	"-0.45"	"-0.00031"	"15/136"	"15"	"136"	"1859132.03283691"	"HCD"	"MS2"	"10.18551"	"45.1"	"100.000"	"79.9700"	"27033"	"27033"	"27009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.1"	""	"68.8"	""	"73.5"	""	"73.5"	""	"87.2"	"73.7"	""	"495"	"51"	"33.000"	"26.000"	"0.000175620497570939"	"16"	"0"	"5.329E-05"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1038.12927"	"2075.25127"	"2075.25165"	"-0.18"	"-0.00019"	"16/136"	"16"	"136"	"709271.872192383"	"HCD"	"MS2"	"0"	"39.8"	"100.000"	"80.2649"	"27204"	"27204"	"27183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.9"	""	"60.6"	""	"64.7"	""	"60.9"	""	"69.6"	"79.9"	""	"491"	"72"	"33.000"	"26.000"	"1.71811210018558E-06"	"17"	"0"	"1.5E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1038.12976"	"2075.25224"	"2075.25165"	"0.29"	"0.00030"	"16/136"	"16"	"136"	"503398.637451172"	"HCD"	"MS2"	"0"	"29.3"	"100.000"	"80.3485"	"27187"	"27187"	"27169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.6"	""	"46.3"	""	"45.6"	""	"49.2"	""	"52.3"	"53.2"	""	"486"	"61"	"33.000"	"26.000"	"2.04930346136719E-05"	"16"	"0"	"3.875E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFVSITPAEVGVLVGK"	"[K].tFVSITPAEVGVLVGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.42242"	"2075.25272"	"2075.25165"	"0.52"	"0.00036"	"11/136"	"11"	"136"	"8803985.98071289"	"HCD"	"MS2"	"1.612661"	"182.0"	"100.000"	"80.2656"	"27154"	"27154"	"27137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.7"	""	"268.1"	""	"307.0"	""	"278.7"	""	"328.7"	"343.4"	""	"473"	"59"	"33.000"	"26.000"	"3.34065129303281E-05"	"17"	"0"	"7.665E-07"	"1.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFASGSPFDPVTLPDGR"	"[R].aIFASGSPFDPVTLPDGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"0"	"3"	"3"	"0.9889"	"0.0000"	"1"	"1"	"1"	"692.70282"	"2076.09391"	"2076.09632"	"-1.16"	"-0.00080"	"17/158"	"17"	"158"	"1892565.47943115"	"HCD"	"MS2"	"19.18512"	"27.6"	"100.000"	"71.7934"	"23759"	"23759"	"23738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.6"	""	"36.0"	""	"34.6"	""	"48.7"	"0.6"	"51.2"	"54.5"	""	"1287"	"90"	"38.000"	"31.000"	"6.49454232190347E-08"	"19"	"0"	"6.75E-07"	"1.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFASGSPFDPVTLPDGR"	"[R].aIFASGSPFDPVTLPDGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"P13697"	"NADP-dependent malic enzyme OS=Rattus norvegicus OX=10116 GN=Me1 PE=1 SV=2"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"1038.55139"	"2076.09551"	"2076.09632"	"-0.39"	"-0.00041"	"8/158"	"8"	"158"	"130849.476257324"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"71.9995"	"23792"	"23792"	"23761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.9"	""	"8.1"	""	"8.5"	""	"6.9"	""	"10.1"	"11.8"	""	"1274"	"40"	"38.000"	"31.000"	"0.00635534940654966"	"16"	"0.0001308"	"0.0003016"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSGFIPVKPSVK"	"[K].mVSGFIPVkPSVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.76636"	"2076.28452"	"2076.28582"	"-0.62"	"-0.00043"	"9/120"	"9"	"120"	"33887490.9094238"	"HCD"	"MS2"	"4.95184"	"731.3"	"41.314"	"52.3009"	"15779"	"15779"	"15762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1416.5"	""	"1472.5"	""	"961.0"	""	"1012.4"	"1.3"	"1056.0"	"978.5"	""	"244"	"24"	"30.000"	"23.000"	"0.0450152670255584"	"14"	"0"	"1.326E-05"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSGFIPVKPSVK"	"[K].mVSGFIPVkPSVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.76654"	"2076.28507"	"2076.28582"	"-0.36"	"-0.00025"	"8/120"	"8"	"120"	"33524931.3978271"	"HCD"	"MS2"	"1.392242"	"751.3"	"38.625"	"52.5014"	"15911"	"15911"	"15894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1423.2"	""	"1494.2"	""	"1023.4"	""	"1027.6"	"5.7"	"1115.5"	"998.8"	""	"244"	"13"	"30.000"	"23.000"	"0.653671922166277"	"13"	"0"	"4.334E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSGFIPVKPSVK"	"[K].mVSGFIPVkPSVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.9130"	"0.0000"	"1"	"1"	"1"	"519.82690"	"2076.28579"	"2076.28582"	"-0.01"	"-0.00001"	"6/120"	"6"	"120"	"19953760.4887695"	"HCD"	"MS2"	"8.56019"	"405.3"	"88.134"	"52.2366"	"15752"	"15752"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"801.8"	""	"821.4"	""	"504.1"	""	"590.1"	"2.0"	"581.7"	"520.7"	""	"238"	"23"	"30.000"	"23.000"	"0.0640541041194383"	"16"	"0"	"7.861E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSGFIPVKPSVK"	"[K].mVSGFIPVkPSVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.8800"	"0.0000"	"1"	"1"	"1"	"519.82697"	"2076.28603"	"2076.28582"	"0.10"	"0.00005"	"6/120"	"6"	"120"	"24282278.5670166"	"HCD"	"MS2"	"8.108921"	"601.7"	"100.000"	"52.4760"	"15900"	"15900"	"15878"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1158.0"	""	"1212.6"	""	"788.2"	""	"814.2"	"2.5"	"883.5"	"817.4"	""	"238"	"25"	"30.000"	"23.000"	"0.0348776296184788"	"17"	"0"	"0.0001728"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDKVWVYPPEK"	"[K].eDkVWVYPPEk.[K]"	"N-Term(TMT6plex); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"1"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"693.06964"	"2077.19437"	"2077.19369"	"0.33"	"0.00023"	"11/114"	"11"	"114"	"2511602.98699951"	"HCD"	"MS2"	"40.19589"	"136.9"	"100.000"	"44.4309"	"12574"	"12574"	"12555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"333.6"	""	"233.5"	""	"167.1"	""	"176.9"	"1.0"	"189.0"	"188.5"	""	"910"	"23"	"36.000"	"29.000"	"0.240996866970704"	"16"	"0"	"8.309E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPLILAINSPATAEVIR"	"[R].gLPLILAINSPATAEVIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.09039"	"2077.25663"	"2077.25824"	"-0.78"	"-0.00054"	"17/164"	"17"	"164"	"1042355.62432861"	"HCD"	"MS2"	"4.006366"	"12.7"	"100.000"	"81.7537"	"27811"	"27811"	"27790"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.9"	""	"13.7"	""	"23.5"	""	"17.4"	""	"23.7"	"29.2"	""	"359"	"67"	"32.000"	"25.000"	"3.31943717106565E-06"	"17"	"0"	"1.254E-06"	"1.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPLILAINSPATAEVIR"	"[R].gLPLILAINSPATAEVIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.09064"	"2077.25736"	"2077.25824"	"-0.43"	"-0.00029"	"19/164"	"19"	"164"	"747786.362854004"	"HCD"	"MS2"	"9.627467"	"14.5"	"100.000"	"82.0448"	"27879"	"27879"	"27856"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.6"	""	"23.1"	""	"21.7"	""	"22.5"	""	"25.0"	"29.4"	""	"357"	"71"	"32.000"	"25.000"	"1.3728978359116E-06"	"17"	"0"	"3.228E-07"	"1.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPLILAINSPATAEVIR"	"[R].gLPLILAINSPATAEVIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.09100"	"2077.25846"	"2077.25824"	"0.10"	"0.00007"	"19/164"	"19"	"164"	"657122.688598633"	"HCD"	"MS2"	"6.523254"	"13.5"	"100.000"	"82.0678"	"27939"	"27939"	"27918"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.2"	""	"14.5"	""	"21.3"	""	"21.2"	""	"29.7"	"23.8"	""	"353"	"61"	"32.000"	"25.000"	"1.29940552707821E-05"	"16"	"0"	"1.069E-06"	"1.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPLILAINSPATAEVIR"	"[R].gLPLILAINSPATAEVIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1039.13293"	"2077.25859"	"2077.25824"	"0.17"	"0.00018"	"5/164"	"5"	"164"	"120818.266540527"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"81.8943"	"27869"	"27869"	"27838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.4"	""	"5.1"	""	"5.9"	""	"6.0"	""	"6.5"	"6.0"	""	"338"	"12"	"32.000"	"25.000"	"1.01131559565194"	"13"	"0.0006037"	"0.003857"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPLILAINSPATAEVIR"	"[R].gLPLILAINSPATAEVIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.09106"	"2077.25864"	"2077.25824"	"0.19"	"0.00013"	"18/164"	"18"	"164"	"923902.399414063"	"HCD"	"MS2"	"13.98965"	"13.6"	"100.000"	"81.7354"	"27753"	"27753"	"27728"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.9"	""	"18.9"	""	"17.2"	""	"26.3"	""	"30.2"	"24.6"	""	"338"	"67"	"32.000"	"25.000"	"3.07529445105087E-06"	"17"	"0"	"1.444E-06"	"1.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPLILAINSPATAEVIR"	"[R].gLPLILAINSPATAEVIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1039.13318"	"2077.25908"	"2077.25824"	"0.40"	"0.00042"	"6/164"	"6"	"164"	"103074.530700684"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"81.8277"	"27791"	"27791"	"27760"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.6"	""	"3.6"	""	"7.0"	""	"3.7"	""	"4.5"	"8.2"	""	"338"	"38"	"32.000"	"25.000"	"0.00270325306835879"	"15"	"7.476E-05"	"0.0001991"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYESFIESLPFLK"	"[K].mYESFIESLPFLk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"693.38080"	"2078.12784"	"2078.12842"	"-0.28"	"-0.00019"	"4/106"	"4"	"106"	"128351.926696777"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"87.4503"	"30072"	"30072"	"30055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"4.3"	""	"8.8"	""	"11.7"	""	"5.8"	"11.9"	""	"1239"	"11"	"37.000"	"30.000"	"4.86453475640939"	"15"	"0.0008731"	"0.00937"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYESFIESLPFLK"	"[K].mYESFIESLPFLk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12369"	"cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"693.38220"	"2078.13205"	"2078.12842"	"1.75"	"0.00121"	"8/106"	"8"	"106"	"117942.181762695"	"HCD"	"MS2"	"15.19756"	"5.0"	"100.000"	"87.5641"	"30167"	"30167"	"30158"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.0"	""	"3.2"	""	"6.7"	"1.8"	"11.7"	""	"8.0"	"11.0"	""	"1212"	"11"	"37.000"	"30.000"	"4.523479475965"	"14"	"0.004346"	"0.123"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPFQVLMNSEK"	"[R].iVNTPFQVLMNSEk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"693.39441"	"2078.16867"	"2078.17202"	"-1.61"	"-0.00111"	"13/144"	"13"	"144"	"1338142.20648193"	"HCD"	"MS2"	"21.85869"	"46.1"	"100.000"	"73.2007"	"24282"	"24282"	"24257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.6"	""	"62.7"	""	"70.3"	""	"54.9"	""	"89.1"	"100.5"	""	"1058"	"32"	"37.000"	"30.000"	"0.0350312530458232"	"16"	"0"	"0.0001565"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPFQVLMNSEK"	"[R].iVNTPFQVLMNSEk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"693.39453"	"2078.16904"	"2078.17202"	"-1.43"	"-0.00099"	"13/144"	"13"	"144"	"1315722.17089844"	"HCD"	"MS2"	"6.946107"	"47.0"	"100.000"	"73.1938"	"24331"	"24331"	"24303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.5"	""	"68.0"	""	"71.9"	""	"56.5"	""	"94.1"	"85.1"	""	"1056"	"31"	"37.000"	"30.000"	"0.0443234872882242"	"18"	"0"	"0.0001775"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESIINIIHSSLAEPR"	"[R].gLESIINIIHSSLAEPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"693.39746"	"2078.17783"	"2078.18072"	"-1.39"	"-0.00096"	"11/172"	"11"	"172"	"190936.470031738"	"HCD"	"MS2"	"51.06941"	"7.9"	"100.000"	"83.7880"	"28590"	"28590"	"28565"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"13.2"	""	"15.2"	""	"14.7"	""	"11.3"	"14.9"	""	"991"	"32"	"36.000"	"29.000"	"0.0324372224250334"	"23"	"0.0001308"	"0.0002926"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVDFSNIPTYLLK"	"[K].lPVDFSNIPTYLLk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"693.41412"	"2078.22782"	"2078.23018"	"-1.14"	"-0.00079"	"9/130"	"9"	"130"	"147271.890686035"	"HCD"	"MS2"	"33.31118"	"5.5"	"100.000"	"90.3252"	"31189"	"31189"	"31178"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.3"	""	"5.5"	""	"7.4"	""	"11.1"	""	"8.6"	"10.0"	""	"570"	"23"	"34.000"	"27.000"	"0.129373360745308"	"16"	"0.000523"	"0.002991"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVDFSNIPTYLLK"	"[K].lPVDFSNIPTYLLk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.41534"	"2078.23148"	"2078.23018"	"0.62"	"0.00043"	"13/130"	"13"	"130"	"189541.737548828"	"HCD"	"MS2"	"29.35161"	"6.5"	"100.000"	"90.1939"	"31109"	"31109"	"31099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"7.9"	""	"10.3"	""	"10.8"	""	"12.5"	"10.4"	""	"532"	"37"	"34.000"	"27.000"	"0.00594130211272922"	"15"	"7.476E-05"	"0.0001881"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPENLPQILLQLK"	"[K].iTPENLPQILLQLk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"693.43744"	"2078.29776"	"2078.29893"	"-0.56"	"-0.00039"	"10/126"	"10"	"126"	"112427.004333496"	"HCD"	"MS2"	"4.727041"	"4.5"	"100.000"	"93.0837"	"32095"	"32095"	"32091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.7"	""	"3.0"	""	"4.2"	""	"9.3"	""	"12.8"	"9.7"	""	"175"	"21"	"29.000"	"22.000"	"0.0724449393248292"	"15"	"0.0003146"	"0.00145"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPENLPQILLQLK"	"[K].iTPENLPQILLQLk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"693.43744"	"2078.29776"	"2078.29893"	"-0.56"	"-0.00039"	"8/126"	"8"	"126"	"142718.586547852"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"93.2787"	"32187"	"32187"	"32178"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.0"	""	"3.5"	""	"8.1"	""	"9.4"	""	"6.5"	"11.0"	""	"175"	"23"	"29.000"	"22.000"	"0.0414961737102714"	"20"	"0.0006037"	"0.004339"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIGLPNGLTFDPFSK"	"[K].dIGLPNGLTFDPFSk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B5DFC9"	"Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1"	"B5DFC9"	"Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"693.72198"	"2079.15140"	"2079.15266"	"-0.61"	"-0.00042"	"13/156"	"13"	"156"	"261530.262329102"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"83.0276"	"28331"	"28331"	"28301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.4"	""	"15.0"	""	"14.0"	""	"21.6"	""	"19.7"	"24.0"	""	"1195"	"36"	"37.000"	"30.000"	"0.0135937071488631"	"15"	"0.0001308"	"0.0002507"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIGLPNGLTFDPFSK"	"[K].dIGLPNGLTFDPFSk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B5DFC9"	"Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1"	"B5DFC9"	"Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"693.72211"	"2079.15177"	"2079.15266"	"-0.43"	"-0.00030"	"10/156"	"10"	"156"	"199435.057128906"	"HCD"	"MS2"	"21.40215"	"10.9"	"100.000"	"83.0720"	"28298"	"28298"	"28272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"10.0"	""	"17.3"	""	"19.7"	""	"25.1"	"22.5"	""	"1194"	"29"	"37.000"	"30.000"	"0.067448816105966"	"19"	"0"	"0.000183"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWNDGYPWDMVVITR"	"[R].vWNDGYPWDMVVITR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.02142"	"2080.04972"	"2080.05235"	"-1.26"	"-0.00088"	"12/156"	"12"	"156"	"293179.886169434"	"HCD"	"MS2"	"30.47482"	"12.2"	"100.000"	"82.2384"	"28009"	"28009"	"27982"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.0"	""	"18.4"	""	"19.6"	""	"15.2"	""	"24.0"	"21.9"	""	"1117"	"33"	"37.000"	"30.000"	"0.0282503073728739"	"15"	"0"	"0.0001677"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWNDGYPWDMVVITR"	"[R].vWNDGYPWDMVVITR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"1040.52881"	"2080.05034"	"2080.05235"	"-0.97"	"-0.00100"	"6/156"	"6"	"156"	"117680.208984375"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"82.2987"	"27983"	"27983"	"27952"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.2"	""	"11.1"	""	"11.8"	""	"8.7"	""	"9.3"	"5.6"	""	"1116"	"5"	"37.000"	"30.000"	"16.4677474847984"	"14"	"0.001286"	"0.01885"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWNDGYPWDMVVITR"	"[R].vWNDGYPWDMVVITR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"694.02191"	"2080.05118"	"2080.05235"	"-0.56"	"-0.00039"	"12/156"	"12"	"156"	"215552.161743164"	"HCD"	"MS2"	"15.47879"	"11.6"	"100.000"	"82.3634"	"28009"	"28009"	"27984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.9"	""	"13.2"	""	"18.5"	""	"20.0"	""	"17.3"	"21.3"	""	"1115"	"30"	"37.000"	"30.000"	"0.0581091966886767"	"20"	"0.0001308"	"0.0002871"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWNDGYPWDMVVITR"	"[R].vWNDGYPWDMVVITR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1040.52954"	"2080.05181"	"2080.05235"	"-0.26"	"-0.00027"	"4/156"	"4"	"156"	"98988.479675293"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"82.2429"	"28011"	"28011"	"27982"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.1"	""	"7.5"	""	"8.9"	""	"3.6"	""	"8.5"	"9.3"	""	"1126"	"1"	"37.000"	"30.000"	"40.2261431580514"	"13"	"0.00252"	"0.03827"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVILEAFSSPSEEVK"	"[K].sVILEAFSSPSEEVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"694.05658"	"2080.15519"	"2080.15781"	"-1.26"	"-0.00087"	"14/136"	"14"	"136"	"4712818.88037109"	"HCD"	"MS2"	"18.63286"	"138.3"	"100.000"	"63.8719"	"20481"	"20481"	"20457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.3"	""	"185.2"	""	"178.7"	""	"246.4"	"1.0"	"253.5"	"249.0"	""	"1154"	"34"	"37.000"	"30.000"	"0.0214870014508886"	"17"	"0"	"4.288E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVILEAFSSPSEEVK"	"[K].sVILEAFSSPSEEVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"1040.58313"	"2080.15898"	"2080.15781"	"0.57"	"0.00059"	"9/136"	"9"	"136"	"187271.332580566"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"64.0152"	"20593"	"20593"	"20563"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.0"	""	"16.7"	""	"17.3"	""	"24.0"	"2.7"	"28.9"	"29.8"	""	"1123"	"25"	"37.000"	"30.000"	"0.171533820507051"	"22"	"0.0001889"	"0.0008151"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVILEAFSSPSEEVK"	"[K].sVILEAFSSPSEEVk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"694.05798"	"2080.15940"	"2080.15781"	"0.76"	"0.00053"	"16/136"	"16"	"136"	"5414162.16925049"	"HCD"	"MS2"	"31.16621"	"160.1"	"100.000"	"63.9186"	"20553"	"20553"	"20531"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.3"	""	"252.9"	""	"219.0"	""	"262.7"	"3.4"	"289.3"	"277.3"	""	"1119"	"44"	"37.000"	"30.000"	"0.00202208818146863"	"20"	"0"	"1.406E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLFTPDLAFEAIVK"	"[R].tGLFTPDLAFEAIVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.07367"	"2080.20646"	"2080.20945"	"-1.44"	"-0.00100"	"11/132"	"11"	"132"	"1367264.32550049"	"HCD"	"MS2"	"6.486507"	"32.6"	"100.000"	"86.4980"	"29738"	"29738"	"29719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.5"	""	"49.5"	""	"41.6"	""	"56.7"	""	"54.4"	"65.8"	""	"735"	"24"	"35.000"	"28.000"	"0.161903912338658"	"14"	"7.476E-05"	"0.0001888"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLFTPDLAFEAIVK"	"[R].tGLFTPDLAFEAIVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1040.60693"	"2080.20659"	"2080.20945"	"-1.37"	"-0.00143"	"6/132"	"6"	"132"	"79600.7647705078"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"86.5810"	"29772"	"29772"	"29747"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.6"	""	"10.0"	""	"5.1"	""	"6.8"	""	"8.6"	"7.8"	""	"738"	"10"	"35.000"	"28.000"	"3.78465560786769"	"13"	"0.0009727"	"0.01062"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLFTPDLAFEAIVK"	"[R].tGLFTPDLAFEAIVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"1040.60779"	"2080.20830"	"2080.20945"	"-0.55"	"-0.00057"	"5/132"	"5"	"132"	"66756.2469482422"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"86.4208"	"29655"	"29655"	"29629"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"6.4"	""	"5.2"	""	"8.6"	""	"5.4"	"7.2"	""	"719"	"15"	"35.000"	"28.000"	"1.11096120798863"	"15"	"0.0006037"	"0.004775"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLFTPDLAFEAIVK"	"[R].tGLFTPDLAFEAIVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.07483"	"2080.20993"	"2080.20945"	"0.23"	"0.00016"	"12/132"	"12"	"132"	"1223638.25732422"	"HCD"	"MS2"	"35.18463"	"23.9"	"100.000"	"86.3793"	"29638"	"29638"	"29617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.7"	""	"34.4"	""	"33.6"	""	"46.3"	""	"39.8"	"44.0"	""	"700"	"27"	"35.000"	"28.000"	"0.0763955469145051"	"14"	"0.0001308"	"0.0002754"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLFTPDLAFEAIVK"	"[R].tGLFTPDLAFEAIVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.07495"	"2080.21030"	"2080.20945"	"0.41"	"0.00028"	"12/132"	"12"	"132"	"494398.486328125"	"HCD"	"MS2"	"4.292829"	"14.6"	"100.000"	"86.6960"	"29766"	"29766"	"29747"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.3"	""	"18.0"	""	"22.2"	""	"20.6"	""	"27.7"	"32.7"	""	"700"	"19"	"35.000"	"28.000"	"0.471051123919582"	"14"	"0.0001889"	"0.000826"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKLEPLGTELHK"	"[R].qkLEPLGTELHk.[N]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"520.82373"	"2080.27309"	"2080.27334"	"-0.12"	"-0.00006"	"11/120"	"11"	"120"	"25704466.6096191"	"HCD"	"MS2"	"5.904734"	"263.7"	"36.366"	"36.8604"	"9532"	"9532"	"9510"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"420.4"	""	"365.5"	""	"321.8"	""	"365.8"	"5.1"	"517.2"	"503.9"	""	"313"	"18"	"31.000"	"24.000"	"0.250330831478196"	"14"	"0"	"1.113E-05"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNGAFTGEISPGMIK"	"[K].vTnGAFTGEISPGMIk.[D]"	"N-Term(TMT6plex); N3(Deamidated); K16(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"694.38342"	"2081.13572"	"2081.13530"	"0.20"	"0.00014"	"16/164"	"16"	"164"	"2172957.62854004"	"HCD"	"MS2"	"11.02739"	"87.0"	"100.000"	"61.0213"	"19370"	"19370"	"19347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.4"	""	"123.7"	""	"136.5"	""	"132.8"	""	"140.5"	"154.8"	""	"1252"	"41"	"37.000"	"30.000"	"0.00485930695009561"	"21"	"0"	"1.902E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNGAFTGEISPGMIK"	"[K].vTnGAFTGEISPGMIk.[D]"	"N-Term(TMT6plex); N3(Deamidated); K16(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.8197"	"0.0000"	"1"	"1"	"1"	"694.38348"	"2081.13590"	"2081.13530"	"0.29"	"0.00020"	"16/164"	"16"	"164"	"2277366.44934082"	"HCD"	"MS2"	"12.46708"	"85.6"	"100.000"	"60.8509"	"19247"	"19247"	"19225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.1"	""	"124.0"	""	"127.2"	""	"123.6"	"1.1"	"147.9"	"154.0"	""	"1251"	"61"	"37.000"	"30.000"	"4.78880677622991E-05"	"27"	"0"	"9.765E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLGPMNIPLVSDPK"	"[K].qGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"694.39886"	"2081.18204"	"2081.18292"	"-0.42"	"-0.00029"	"16/152"	"16"	"152"	"2907946.07098389"	"HCD"	"MS2"	"2.670254"	"85.0"	"100.000"	"63.1282"	"20230"	"20230"	"20211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.4"	""	"111.5"	""	"116.9"	""	"116.8"	"2.6"	"173.2"	"167.4"	""	"907"	"41"	"36.000"	"29.000"	"0.00347998435425585"	"17"	"0"	"1.924E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLGPMNIPLVSDPK"	"[K].qGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"1041.09485"	"2081.18242"	"2081.18292"	"-0.24"	"-0.00025"	"17/152"	"17"	"152"	"684230.714172363"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"62.7911"	"20040"	"20040"	"20009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.4"	""	"55.7"	""	"43.2"	""	"46.4"	""	"73.9"	"87.9"	""	"907"	"49"	"36.000"	"29.000"	"0.000599207570103612"	"20"	"0"	"0.0001027"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLGPMNIPLVSDPK"	"[K].qGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"1041.09509"	"2081.18291"	"2081.18292"	"0.00"	"0.00000"	"9/152"	"9"	"152"	"680076.943969727"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"62.9095"	"20141"	"20141"	"20115"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.2"	""	"39.4"	"1.7"	"54.2"	""	"49.2"	"2.6"	"76.6"	"84.4"	""	"912"	"66"	"36.000"	"29.000"	"1.09386781107289E-05"	"20"	"0"	"8.497E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLGPMNIPLVSDPK"	"[K].qGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.39917"	"2081.18296"	"2081.18292"	"0.02"	"0.00001"	"17/152"	"17"	"152"	"5582848.10253906"	"HCD"	"MS2"	"19.58748"	"129.5"	"100.000"	"62.6878"	"19997"	"19997"	"19977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.2"	""	"169.2"	""	"154.9"	""	"184.2"	"0.9"	"250.5"	"277.7"	""	"911"	"46"	"36.000"	"29.000"	"0.00113106712946213"	"15"	"0"	"1.454E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLGPMNIPLVSDPK"	"[K].qGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.9808"	"0.0000"	"1"	"1"	"1"	"694.39923"	"2081.18314"	"2081.18292"	"0.11"	"0.00007"	"17/152"	"17"	"152"	"4406715.85089111"	"HCD"	"MS2"	"2.69345"	"106.3"	"100.000"	"62.9962"	"20123"	"20123"	"20105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.6"	""	"134.0"	"1.8"	"136.4"	""	"138.1"	"2.3"	"222.6"	"227.7"	""	"907"	"52"	"36.000"	"29.000"	"0.000258569497479319"	"16"	"0"	"9.591E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLGPMNIPLVSDPK"	"[K].qGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.39923"	"2081.18314"	"2081.18292"	"0.11"	"0.00007"	"18/152"	"18"	"152"	"8029541.38684082"	"HCD"	"MS2"	"9.814783"	"157.1"	"100.000"	"62.8198"	"20104"	"20104"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"227.6"	""	"188.3"	""	"199.7"	""	"210.4"	""	"320.7"	"345.9"	""	"907"	"50"	"36.000"	"29.000"	"0.000446249036462674"	"16"	"0"	"2.76E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVPVIFIHPLNTGLFR"	"[K].eVPVIFIHPLNTGLFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P86410"	"Ral GTPase-activating protein subunit beta OS=Rattus norvegicus OX=10116 GN=Ralgapb PE=1 SV=1"	"P86410"	"Ral GTPase-activating protein subunit beta OS=Rattus norvegicus OX=10116 GN=Ralgapb PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.41284"	"2081.22397"	"2081.21090"	"6.28"	"0.00436"	"9/152"	"9"	"152"	"1073697.08728027"	"HCD"	"MS2"	"57.83883"	"32.8"	"100.000"	"73.8214"	"24535"	"24535"	"24513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.6"	""	"38.1"	""	"49.1"	""	"48.9"	"0.1"	"60.9"	"72.8"	""	"662"	"12"	"35.000"	"28.000"	"1.98530846240574"	"13"	"0.0001859"	"0.0003513"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLEYTDTSYEDK"	"[R].lFLEYTDTSYEDk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"694.69379"	"2082.06681"	"2082.06832"	"-0.73"	"-0.00051"	"12/112"	"12"	"112"	"2630989.37567139"	"HCD"	"MS2"	"45.77458"	"111.6"	"100.000"	"64.1101"	"20631"	"20631"	"20611"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.0"	""	"133.2"	""	"150.9"	""	"186.6"	""	"225.1"	"217.2"	""	"1213"	"45"	"37.000"	"30.000"	"0.00212731011552233"	"19"	"0"	"8.6E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLEYTDTSYEDK"	"[R].lFLEYTDTSYEDk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"694.69421"	"2082.06809"	"2082.06832"	"-0.11"	"-0.00008"	"13/112"	"13"	"112"	"1799280.2913208"	"HCD"	"MS2"	"32.70007"	"93.5"	"100.000"	"64.1206"	"20583"	"20583"	"20553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.9"	""	"116.7"	""	"124.7"	""	"154.9"	""	"186.0"	"188.9"	""	"1219"	"29"	"37.000"	"30.000"	"0.0703029760641956"	"17"	"7.476E-05"	"0.0002004"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPEYLSNWTMEK"	"[K].iLPEYLSNWTMEk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"694.71790"	"2082.13913"	"2082.13457"	"2.19"	"0.00152"	"10/122"	"10"	"122"	"806197.520568848"	"HCD"	"MS2"	"7.519632"	"35.4"	"100.000"	"79.4231"	"26810"	"26810"	"26785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.9"	""	"48.7"	""	"50.5"	""	"69.5"	""	"63.4"	"68.0"	""	"1234"	"6"	"37.000"	"30.000"	"13.9086559389805"	"15"	"0.003137"	"0.06319"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLAGRDLTDYLMK"	"[R].lDLAGRDLTDYLMk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"694.72656"	"2082.16513"	"2082.16693"	"-0.86"	"-0.00060"	"13/136"	"13"	"136"	"4916319.31188965"	"HCD"	"MS2"	"6.345043"	"249.5"	"100.000"	"70.8424"	"23371"	"23371"	"23354"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"468.0"	""	"457.4"	""	"405.5"	""	"258.0"	"0.6"	"379.9"	"385.6"	""	"1075"	"10"	"37.000"	"30.000"	"5.41225772007845"	"14"	"0.0001889"	"0.0004831"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGNIATNEDTKK"	"[K].gFGNIATNEDTkk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.73096"	"2082.17832"	"2082.17983"	"-0.73"	"-0.00050"	"10/122"	"10"	"122"	"4823526.80053711"	"HCD"	"MS2"	"0"	"327.5"	"100.000"	"35.4692"	"8918"	"8918"	"8891"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"545.9"	""	"365.3"	""	"275.0"	""	"613.5"	""	"728.3"	"584.9"	""	"990"	"8"	"36.000"	"29.000"	"7.54406113129658"	"13"	"0"	"3.936E-05"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGNIATNEDTKK"	"[K].gFGNIATNEDTkk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.73126"	"2082.17923"	"2082.17983"	"-0.29"	"-0.00020"	"17/122"	"17"	"122"	"4915006.72454834"	"HCD"	"MS2"	"5.350504"	"356.5"	"100.000"	"35.5222"	"8983"	"8983"	"8954"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"603.3"	""	"381.0"	""	"306.6"	""	"691.0"	"6.1"	"763.5"	"631.3"	""	"964"	"35"	"36.000"	"29.000"	"0.0159605200554609"	"15"	"0"	"2.331E-06"	"1.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVCMLSNTTAIAEAWAR"	"[R].aVcMLSNTTAIAEAWAR.[L]"	"N-Term(TMT6plex); C3(Methylthio)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"695.01495"	"2083.03031"	"2083.03360"	"-1.58"	"-0.00110"	"16/162"	"16"	"162"	"369916.266906738"	"HCD"	"MS2"	"17.93488"	"12.3"	"100.000"	"80.2562"	"27150"	"27150"	"27121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.9"	""	"20.3"	""	"18.9"	""	"18.4"	""	"21.8"	"23.6"	""	"1025"	"45"	"37.000"	"30.000"	"0.00172462179304939"	"16"	"0"	"1.521E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVCMLSNTTAIAEAWAR"	"[R].aVcMLSNTTAIAEAWAR.[L]"	"N-Term(TMT6plex); C3(Methylthio)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.8491"	"0.0000"	"1"	"1"	"1"	"695.01575"	"2083.03269"	"2083.03360"	"-0.44"	"-0.00031"	"15/162"	"15"	"162"	"376252.93939209"	"HCD"	"MS2"	"15.88307"	"11.8"	"100.000"	"80.3109"	"27223"	"27223"	"27199"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.2"	""	"14.4"	""	"18.0"	""	"23.0"	""	"21.6"	"21.6"	""	"1047"	"53"	"37.000"	"30.000"	"0.00025463417217948"	"24"	"0"	"5.475E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGFELPQGPLGTSFK"	"[K].fGFELPQGPLGTSFk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"695.05646"	"2083.15482"	"2083.16283"	"-3.85"	"-0.00267"	"15/146"	"15"	"146"	"824646.049255371"	"HCD"	"MS2"	"15.98965"	"35.5"	"100.000"	"79.3603"	"26835"	"26835"	"26815"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.1"	""	"48.3"	""	"45.1"	""	"60.3"	""	"72.9"	"68.6"	""	"1131"	"35"	"37.000"	"30.000"	"0.0192944591522201"	"17"	"0"	"0.0001297"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMNPFNLPNLYQK"	"[K].fMNPFNLPNLYQk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"695.38464"	"2084.13938"	"2084.14032"	"-0.45"	"-0.00032"	"11/118"	"11"	"118"	"412145.738586426"	"HCD"	"MS2"	"19.46861"	"19.4"	"100.000"	"81.6870"	"27733"	"27733"	"27712"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.1"	""	"31.7"	""	"29.0"	""	"21.0"	"0.9"	"29.2"	"39.5"	""	"1214"	"27"	"37.000"	"30.000"	"0.112250605171969"	"20"	"0.0001859"	"0.0003698"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEKPDGSPVFIAFR"	"[K].yEkPDGSPVFIAFR.[S]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.39008"	"2084.15567"	"2084.15808"	"-1.16"	"-0.00080"	"17/136"	"17"	"136"	"4596242.95306396"	"HCD"	"MS2"	"0"	"263.0"	"99.866"	"53.1730"	"16131"	"16131"	"16128"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"296.9"	""	"331.8"	""	"364.0"	""	"471.1"	""	"519.9"	"516.6"	""	"1110"	"11"	"37.000"	"30.000"	"4.60567175970504"	"13"	"0"	"5.438E-06"	"1.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEKPDGSPVFIAFR"	"[K].yEkPDGSPVFIAFR.[S]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"695.39056"	"2084.15714"	"2084.15808"	"-0.45"	"-0.00031"	"11/136"	"11"	"136"	"5940485.10626221"	"HCD"	"MS2"	"8.318451"	"323.5"	"100.000"	"53.3814"	"16266"	"16266"	"16258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.9"	""	"405.7"	""	"445.6"	""	"560.1"	"3.0"	"623.3"	"632.9"	""	"1109"	"18"	"37.000"	"30.000"	"0.820165601239271"	"16"	"0"	"4.178E-06"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEYLEEVAVNFAK"	"[R].tIEYLEEVAVNFAk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.39355"	"2084.16611"	"2084.16798"	"-0.90"	"-0.00062"	"9/122"	"9"	"122"	"129348.708984375"	"HCD"	"MS2"	"20.79789"	"6.0"	"100.000"	"91.3304"	"31516"	"31516"	"31511"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.0"	""	"10.3"	""	"6.8"	""	"9.9"	""	"11.3"	"9.6"	""	"1076"	"21"	"37.000"	"30.000"	"0.437302817696286"	"14"	"0.0006037"	"0.003993"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NITYLPAGQSVLLQLPQ"	"[R].nITYLPAGQSVLLQLPQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"1042.59985"	"2084.19243"	"2084.19531"	"-1.38"	"-0.00144"	"5/174"	"5"	"174"	"53412.2285766602"	"HCD"	"MS2"	"0"	""	"100.000"	"86.0411"	"29554"	"29554"	"29529"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	""	""	""	""	""	"880"	"6"	"36.000"	"29.000"	"11.6265985322166"	"14"	"0.001058"	"0.01356"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NITYLPAGQSVLLQLPQ"	"[R].nITYLPAGQSVLLQLPQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"1042.60352"	"2084.19975"	"2084.19531"	"2.13"	"0.00222"	"2/174"	"2"	"174"	"45089.3798217773"	"HCD"	"MS2"	"0"	"0.2"	"100.000"	"86.0081"	"29489"	"29489"	"29464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	""	""	""	"2.0"	""	"860"	"0"	"36.000"	"29.000"	"38.5894381635322"	"13"	"0.006471"	"0.2337"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPELDTVVPLESSK"	"[R].lVPELDTVVPLESSk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.41327"	"2084.22525"	"2084.22549"	"-0.11"	"-0.00008"	"16/132"	"16"	"132"	"1430823.42767334"	"HCD"	"MS2"	"21.50186"	"54.9"	"100.000"	"72.8846"	"24153"	"24153"	"24129"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.1"	""	"60.1"	""	"73.7"	""	"96.4"	""	"99.0"	"112.5"	""	"640"	"36"	"35.000"	"28.000"	"0.00738159100390422"	"15"	"0"	"1.329E-05"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPELDTVVPLESSK"	"[R].lVPELDTVVPLESSk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.41345"	"2084.22580"	"2084.22549"	"0.15"	"0.00010"	"14/132"	"14"	"132"	"1475121.30334473"	"HCD"	"MS2"	"24.15633"	"54.7"	"100.000"	"72.7604"	"24154"	"24154"	"24127"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.9"	""	"59.2"	""	"66.2"	""	"102.8"	"0.2"	"105.4"	"110.1"	""	"634"	"43"	"35.000"	"28.000"	"0.00162577058725263"	"15"	"0"	"1.444E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLPLALEGTDVGQTK"	"[K].aLLPLALEGTDVGQTk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.41638"	"2084.23459"	"2084.23673"	"-1.02"	"-0.00071"	"10/138"	"10"	"138"	"1750353.23382568"	"HCD"	"MS2"	"19.71574"	"70.1"	"100.000"	"68.9117"	"22531"	"22531"	"22506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.9"	""	"89.0"	"2.0"	"102.4"	""	"115.7"	"1.0"	"120.2"	"126.2"	""	"579"	"30"	"34.000"	"27.000"	"0.0303842533094847"	"14"	"0"	"1.638E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLPLALEGTDVGQTK"	"[K].aLLPLALEGTDVGQTk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.41705"	"2084.23661"	"2084.23673"	"-0.06"	"-0.00004"	"11/138"	"11"	"138"	"1824979.54833984"	"HCD"	"MS2"	"17.86182"	"80.2"	"100.000"	"68.7857"	"22531"	"22531"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.1"	""	"111.7"	""	"117.3"	""	"113.2"	""	"131.9"	"151.7"	""	"560"	"33"	"34.000"	"27.000"	"0.0148305764289664"	"15"	"0"	"1.969E-05"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEDQYGVSLFNSMR"	"[R].fYEDQYGVSLFNSMR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"695.66925"	"2084.99320"	"2084.99489"	"-0.81"	"-0.00056"	"17/152"	"17"	"152"	"1127938.09613037"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"71.8668"	"23789"	"23789"	"23769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.6"	""	"44.6"	""	"50.8"	""	"56.4"	""	"81.8"	"74.1"	""	"645"	"25"	"35.000"	"28.000"	"0.111822634270942"	"22"	"0"	"7.798E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEDQYGVSLFNSMR"	"[R].fYEDQYGVSLFNSMR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"695.67004"	"2084.99558"	"2084.99489"	"0.33"	"0.00023"	"9/152"	"9"	"152"	"1240450.83270264"	"HCD"	"MS2"	"10.12123"	"36.9"	"100.000"	"71.9581"	"23775"	"23775"	"23745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.0"	""	"44.2"	""	"50.7"	"2.2"	"53.3"	"1.3"	"76.7"	"78.2"	""	"681"	"24"	"35.000"	"28.000"	"0.134932670663977"	"21"	"0"	"9.405E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGFPTIYFAPSGDK"	"[K].vEGFPTIYFAPSGDk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.04578"	"2086.12278"	"2086.12611"	"-1.60"	"-0.00111"	"17/136"	"17"	"136"	"3848082.49139404"	"HCD"	"MS2"	"0"	"113.9"	"100.000"	"70.0665"	"23002"	"23002"	"22979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.4"	""	"141.4"	""	"148.9"	""	"197.7"	""	"217.9"	"214.7"	""	"1218"	"23"	"37.000"	"30.000"	"0.319607743292111"	"14"	"0"	"4.044E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGFPTIYFAPSGDK"	"[K].vEGFPTIYFAPSGDk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.04590"	"2086.12314"	"2086.12611"	"-1.42"	"-0.00099"	"12/136"	"12"	"136"	"3498500.49981689"	"HCD"	"MS2"	"14.15162"	"105.0"	"100.000"	"69.8760"	"22976"	"22976"	"22959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.7"	""	"126.2"	""	"136.9"	""	"172.4"	""	"208.3"	"210.6"	""	"1226"	"32"	"37.000"	"30.000"	"0.0362627281749566"	"15"	"0"	"4.188E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGFPTIYFAPSGDK"	"[K].vEGFPTIYFAPSGDk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"1043.56592"	"2086.12456"	"2086.12611"	"-0.75"	"-0.00078"	"15/136"	"15"	"136"	"315576.720581055"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"69.9565"	"23009"	"23009"	"22986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.3"	""	"21.3"	""	"28.2"	""	"32.6"	""	"52.3"	"47.7"	""	"1214"	"45"	"37.000"	"30.000"	"0.00189316597754502"	"16"	"7.476E-05"	"0.0001925"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGFPTIYFAPSGDK"	"[K].vEGFPTIYFAPSGDk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"1043.56665"	"2086.12602"	"2086.12611"	"-0.04"	"-0.00004"	"13/136"	"13"	"136"	"259168.096069336"	"HCD"	"MS2"	"0"	"18.7"	"100.000"	"70.1080"	"23019"	"23019"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.8"	""	"20.0"	""	"27.4"	""	"23.8"	""	"44.3"	"36.3"	""	"1211"	"52"	"37.000"	"30.000"	"0.000427675279106224"	"18"	"0"	"6.907E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMAYAFALAGNQEK"	"[K].tLMAYAFALAGNQEk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"696.05219"	"2086.14200"	"2086.14072"	"0.62"	"0.00043"	"15/144"	"15"	"144"	"635780.974365234"	"HCD"	"MS2"	"19.96714"	"25.7"	"100.000"	"78.3292"	"26364"	"26364"	"26337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.7"	""	"47.3"	""	"31.8"	""	"40.3"	""	"39.2"	"40.3"	""	"1221"	"34"	"37.000"	"30.000"	"0.0246425512406723"	"22"	"0"	"1.392E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLMAYAFALAGNQEK"	"[K].tLMAYAFALAGNQEk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.05243"	"2086.14273"	"2086.14072"	"0.97"	"0.00067"	"9/144"	"9"	"144"	"481612.61706543"	"HCD"	"MS2"	"40.13855"	"20.3"	"100.000"	"78.2039"	"26364"	"26364"	"26335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.9"	""	"31.4"	""	"28.7"	""	"29.4"	""	"31.1"	"35.6"	""	"1227"	"22"	"37.000"	"30.000"	"0.388879067856125"	"14"	"0"	"7.391E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.05432"	"2086.14841"	"2086.15260"	"-2.01"	"-0.00140"	"10/122"	"10"	"122"	"3189626.56225586"	"HCD"	"MS2"	"31.53543"	"121.2"	"100.000"	"69.8283"	"22905"	"22905"	"22885"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.3"	""	"149.8"	""	"180.8"	""	"192.0"	"1.3"	"227.5"	"231.4"	""	"1190"	"21"	"37.000"	"30.000"	"0.494899443806089"	"14"	"0.0001889"	"0.001038"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1043.57813"	"2086.14897"	"2086.15260"	"-1.74"	"-0.00181"	"12/122"	"12"	"122"	"322996.41229248"	"HCD"	"MS2"	"0"	"20.1"	"100.000"	"69.6927"	"22850"	"22850"	"22826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.2"	""	"24.9"	""	"31.8"	""	"38.1"	""	"36.7"	"36.8"	""	"1187"	"37"	"37.000"	"30.000"	"0.0113349790895906"	"15"	"0.0003839"	"0.001704"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.9535"	"0.0000"	"1"	"1"	"1"	"522.29279"	"2086.14931"	"2086.15260"	"-1.58"	"-0.00082"	"14/122"	"14"	"122"	"7963429.32824707"	"HCD"	"MS2"	"10.18152"	"127.1"	"100.000"	"69.2715"	"22678"	"22678"	"22650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.3"	""	"171.2"	""	"174.4"	""	"242.0"	""	"214.6"	"246.6"	""	"1201"	"43"	"37.000"	"30.000"	"0.00304447920318959"	"17"	"0"	"0.0001688"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"522.29285"	"2086.14956"	"2086.15260"	"-1.46"	"-0.00076"	"13/122"	"13"	"122"	"7557985.97424316"	"HCD"	"MS2"	"13.0674"	"124.2"	"100.000"	"69.0925"	"22656"	"22656"	"22634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.9"	""	"165.6"	""	"174.9"	""	"227.8"	"1.0"	"213.6"	"236.0"	""	"1196"	"48"	"37.000"	"30.000"	"0.000862384980211872"	"16"	"0"	"0.0001244"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1043.57861"	"2086.14995"	"2086.15260"	"-1.27"	"-0.00133"	"11/122"	"11"	"122"	"2718936.08984375"	"HCD"	"MS2"	"0"	"123.2"	"100.000"	"69.3180"	"22748"	"22748"	"22730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.8"	""	"170.7"	""	"188.7"	""	"227.2"	""	"203.3"	"233.7"	""	"1192"	"55"	"37.000"	"30.000"	"0.000201023235960686"	"16"	"0.0001889"	"0.0006998"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.05518"	"2086.15097"	"2086.15260"	"-0.78"	"-0.00054"	"15/122"	"15"	"122"	"8153350.88513184"	"HCD"	"MS2"	"13.82523"	"168.5"	"100.000"	"68.9678"	"22605"	"22605"	"22586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"221.9"	""	"238.1"	""	"261.2"	""	"309.2"	"0.2"	"269.1"	"294.5"	""	"1185"	"43"	"37.000"	"30.000"	"0.00322617821809134"	"15"	"0"	"0.0001445"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.9444"	"0.0000"	"1"	"1"	"1"	"522.29327"	"2086.15127"	"2086.15260"	"-0.64"	"-0.00033"	"12/122"	"12"	"122"	"2763378.31176758"	"HCD"	"MS2"	"7.681697"	"49.8"	"100.000"	"69.5711"	"22800"	"22800"	"22778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.2"	""	"59.6"	""	"68.7"	""	"90.8"	"2.0"	"93.3"	"94.4"	""	"1185"	"54"	"37.000"	"30.000"	"0.000227346542954175"	"19"	"0.0001889"	"0.0003998"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1043.57959"	"2086.15190"	"2086.15260"	"-0.34"	"-0.00035"	"12/122"	"12"	"122"	"2089991.60119629"	"HCD"	"MS2"	"0"	"95.0"	"100.000"	"69.5225"	"22780"	"22780"	"22762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"110.8"	""	"129.7"	""	"144.3"	""	"167.1"	""	"159.5"	"189.7"	""	"1186"	"61"	"37.000"	"30.000"	"5.27296262889764E-05"	"16"	"0.0001308"	"0.000236"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.9722"	"0.0000"	"1"	"1"	"1"	"522.29352"	"2086.15224"	"2086.15260"	"-0.17"	"-0.00009"	"10/122"	"10"	"122"	"1746308.52246094"	"HCD"	"MS2"	"7.859103"	"36.6"	"100.000"	"69.4587"	"22806"	"22806"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.5"	""	"41.9"	""	"53.6"	""	"67.7"	""	"66.2"	"79.8"	""	"1185"	"36"	"37.000"	"30.000"	"0.0133871569385593"	"16"	"0.0001889"	"0.0004472"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1043.57983"	"2086.15239"	"2086.15260"	"-0.10"	"-0.00011"	"11/122"	"11"	"122"	"1314913.84716797"	"HCD"	"MS2"	"0"	"64.1"	"100.000"	"69.0140"	"22624"	"22624"	"22602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.4"	""	"89.7"	""	"91.1"	""	"123.4"	""	"92.8"	"121.6"	""	"1186"	"53"	"37.000"	"30.000"	"0.000301338549438413"	"16"	"0.0001859"	"0.0003635"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.05597"	"2086.15335"	"2086.15260"	"0.36"	"0.00025"	"15/122"	"15"	"122"	"7846326.34039307"	"HCD"	"MS2"	"15.02264"	"179.5"	"100.000"	"69.1400"	"22624"	"22624"	"22602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"251.4"	""	"265.4"	"2.5"	"268.6"	""	"327.4"	""	"284.3"	"300.0"	""	"1173"	"37"	"37.000"	"30.000"	"0.0118923591499923"	"15"	"0"	"2.555E-05"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1043.58032"	"2086.15337"	"2086.15260"	"0.37"	"0.00038"	"11/122"	"11"	"122"	"1393004.39794922"	"HCD"	"MS2"	"0"	"62.9"	"100.000"	"69.1999"	"22649"	"22649"	"22618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.8"	""	"86.2"	""	"96.2"	""	"121.1"	"1.2"	"92.7"	"114.4"	""	"1173"	"62"	"37.000"	"30.000"	"3.80424095276042E-05"	"16"	"0.0001308"	"0.0002352"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"696.05737"	"2086.15757"	"2086.15260"	"2.38"	"0.00165"	"12/122"	"12"	"122"	"75686479.0053711"	"HCD"	"MS2"	"0"	"159.7"	"9.507"	"69.2744"	"22731"	"22731"	"22714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.9"	""	"205.1"	""	"245.3"	""	"284.0"	""	"255.8"	"324.1"	""	"1141"	"41"	"37.000"	"30.000"	"0.00413290715222782"	"16"	"0.0001889"	"0.0005093"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPPQPAEPWNFVK"	"[R].fAPPQPAEPWNFVk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.05835"	"2086.16050"	"2086.15260"	"3.78"	"0.00263"	"14/122"	"14"	"122"	"88988605.0517578"	"HCD"	"MS2"	"0"	"177.1"	"8.902"	"69.4397"	"22747"	"22747"	"22730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.9"	""	"225.2"	""	"269.2"	""	"319.8"	""	"307.5"	"352.8"	""	"1137"	"36"	"37.000"	"30.000"	"0.014280074363132"	"15"	"0.0001889"	"0.0007586"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEPVALVSLNTVLSGK"	"[R].tEPVALVSLNTVLSGk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O70535"	"Leukemia inhibitory factor receptor OS=Rattus norvegicus OX=10116 GN=Lifr PE=2 SV=1"	"O70535"	"Leukemia inhibitory factor receptor OS=Rattus norvegicus OX=10116 GN=Lifr PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.08862"	"2086.25132"	"2086.25238"	"-0.51"	"-0.00035"	"12/158"	"12"	"158"	"977366.49786377"	"HCD"	"MS2"	"31.50766"	"37.5"	"100.000"	"75.5765"	"25303"	"25303"	"25279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.5"	""	"57.1"	""	"52.8"	""	"56.0"	"1.6"	"67.9"	"70.7"	""	"430"	"49"	"33.000"	"26.000"	"0.000270046442194398"	"16"	"0"	"1.846E-05"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYYMSAGLQPVPIVFR"	"[K].tYYmSAGLQPVPIVFR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.37671"	"2087.11557"	"2087.11970"	"-1.98"	"-0.00138"	"16/142"	"16"	"142"	"1638054.57025146"	"HCD"	"MS2"	"5.319827"	"38.0"	"100.000"	"65.1447"	"21054"	"21054"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.3"	""	"41.6"	""	"54.0"	""	"85.7"	""	"65.9"	"67.3"	""	"1283"	"37"	"38.000"	"31.000"	"0.0119728257167044"	"15"	"0"	"2.171E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYYMSAGLQPVPIVFR"	"[K].tYYmSAGLQPVPIVFR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.37769"	"2087.11850"	"2087.11970"	"-0.57"	"-0.00040"	"17/142"	"17"	"142"	"1518263.27160645"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"65.1275"	"20994"	"20994"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.6"	""	"41.1"	""	"42.2"	""	"70.8"	"1.0"	"63.4"	"60.1"	""	"1251"	"43"	"37.000"	"30.000"	"0.00302153280675878"	"15"	"0"	"5.173E-06"	"1.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFFPEEISSMVLTK"	"[K].tFFPEEISSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"696.38739"	"2087.14762"	"2087.14989"	"-1.09"	"-0.00076"	"6/128"	"6"	"128"	"1093026.14398193"	"HCD"	"MS2"	"17.46476"	"32.3"	"100.000"	"82.5340"	"28129"	"28129"	"28109"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.2"	""	"39.7"	""	"50.5"	""	"41.0"	""	"68.0"	"65.0"	""	"1208"	"20"	"37.000"	"30.000"	"0.584839825181795"	"24"	"0.0001889"	"0.0004745"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFFPEEISSMVLTK"	"[K].tFFPEEISSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P14659"	"Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"696.38867"	"2087.15146"	"2087.14989"	"0.76"	"0.00053"	"15/128"	"15"	"128"	"1218253.87878418"	"HCD"	"MS2"	"21.9467"	"35.8"	"100.000"	"82.5091"	"28068"	"28068"	"28048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.5"	""	"47.3"	""	"50.0"	""	"42.2"	"0.5"	"72.6"	"69.4"	""	"1173"	"20"	"37.000"	"30.000"	"0.619823469153811"	"23"	"0"	"0.0001618"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVINGKPITIFQER"	"[K].lVInGkPITIFQER.[D]"	"N-Term(TMT6plex); N4(Deamidated); K6(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.42462"	"2087.25931"	"2087.26288"	"-1.71"	"-0.00119"	"11/132"	"11"	"132"	"5168781.38018799"	"HCD"	"MS2"	"12.84118"	"261.8"	"100.000"	"61.4847"	"19559"	"19559"	"19539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"449.1"	""	"304.0"	""	"323.8"	""	"452.6"	""	"438.4"	"512.7"	""	"429"	"19"	"33.000"	"26.000"	"0.291358234292944"	"14"	"0"	"6.745E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVINGKPITIFQER"	"[K].lVInGkPITIFQER.[D]"	"N-Term(TMT6plex); N4(Deamidated); K6(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.42542"	"2087.26169"	"2087.26288"	"-0.57"	"-0.00040"	"10/132"	"10"	"132"	"13150424.6203613"	"HCD"	"MS2"	"0.7487005"	"487.2"	"84.270"	"62.4946"	"19972"	"19972"	"19955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"767.4"	""	"687.1"	""	"728.8"	""	"721.5"	""	"780.5"	"932.5"	""	"423"	"12"	"33.000"	"26.000"	"1.23968221794717"	"13"	"0"	"1.578E-05"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVINGKPITIFQER"	"[K].lVInGkPITIFQER.[D]"	"N-Term(TMT6plex); N4(Deamidated); K6(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.42578"	"2087.26279"	"2087.26288"	"-0.04"	"-0.00003"	"9/132"	"9"	"132"	"8453960.73809814"	"HCD"	"MS2"	"4.306212"	"383.9"	"100.000"	"61.3857"	"19466"	"19466"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"654.4"	""	"448.2"	""	"484.1"	""	"617.6"	""	"699.8"	"738.3"	""	"433"	"8"	"33.000"	"26.000"	"3.1656135826988"	"13"	"0"	"3.904E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVINGKPITIFQER"	"[K].lVInGkPITIFQER.[D]"	"N-Term(TMT6plex); N4(Deamidated); K6(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.42596"	"2087.26334"	"2087.26288"	"0.22"	"0.00015"	"10/132"	"10"	"132"	"10666401.2298584"	"HCD"	"MS2"	"4.10127"	"497.3"	"100.000"	"62.3647"	"19866"	"19866"	"19849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"811.7"	""	"665.9"	""	"753.1"	""	"743.1"	"5.2"	"758.4"	"966.1"	""	"424"	"20"	"33.000"	"26.000"	"0.209573256067271"	"14"	"0"	"7.29E-06"	"1.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYSTAFTPMYHAVTTR"	"[K].iYSTAFTPMYHAVTTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"0"	"3"	"3"	"0.9828"	"0.0000"	"1"	"1"	"1"	"696.69867"	"2088.08146"	"2088.07856"	"1.39"	"0.00096"	"15/144"	"15"	"144"	"2085176.53704834"	"HCD"	"MS2"	"33.61737"	"52.0"	"100.000"	"50.1303"	"14893"	"14893"	"14880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.3"	""	"77.6"	""	"80.8"	""	"87.9"	""	"84.3"	"86.4"	""	"1192"	"58"	"37.000"	"30.000"	"0.00010598545283832"	"17"	"0"	"3.543E-06"	"1.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYSTAFTPMYHAVTTR"	"[K].iYSTAFTPMYHAVTTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"P70619"	"Glutathione reductase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gsr PE=2 SV=2"	"0"	"3"	"3"	"0.9818"	"0.0000"	"1"	"1"	"1"	"696.69952"	"2088.08402"	"2088.07856"	"2.61"	"0.00182"	"14/144"	"14"	"144"	"2209238.35760498"	"HCD"	"MS2"	"0"	"56.9"	"100.000"	"50.3744"	"15041"	"15041"	"15031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.7"	""	"82.1"	""	"80.0"	""	"98.6"	"1.4"	"95.5"	"109.8"	""	"1213"	"55"	"37.000"	"30.000"	"0.000203156538849222"	"17"	"0"	"5.7E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDVLTLLLPVMGDSK"	"[R].eDVLTLLLPVMGDSk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1044.60352"	"2088.19975"	"2088.20265"	"-1.39"	"-0.00145"	"8/138"	"8"	"138"	"64720.2292480469"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"96.7602"	"33247"	"33247"	"33239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.1"	""	"2.3"	""	"5.7"	""	"3.2"	""	"5.0"	"5.4"	""	"908"	"10"	"36.000"	"29.000"	"4.10256861069925"	"13"	"0.003107"	"0.05925"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEISSMVLTK"	"[R].sFYPEEISSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"1045.06726"	"2089.12724"	"2089.12915"	"-0.91"	"-0.00095"	"11/128"	"11"	"128"	"301881.473693848"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"74.1671"	"24728"	"24728"	"24703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.1"	""	"42.6"	""	"36.7"	""	"25.2"	""	"43.8"	"41.6"	""	"1316"	"31"	"38.000"	"31.000"	"0.047122236392009"	"16"	"0.0001889"	"0.0006295"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEISSMVLTK"	"[R].sFYPEEISSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"697.04742"	"2089.12772"	"2089.12915"	"-0.68"	"-0.00048"	"12/128"	"12"	"128"	"5057192.14508057"	"HCD"	"MS2"	"5.220398"	"136.5"	"100.000"	"74.1508"	"24721"	"24721"	"24703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.2"	""	"212.0"	""	"206.4"	""	"152.5"	""	"252.0"	"271.9"	""	"1326"	"31"	"38.000"	"31.000"	"0.0506423124512009"	"28"	"0"	"1.58E-05"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEISSMVLTK"	"[R].sFYPEEISSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"1045.06750"	"2089.12773"	"2089.12915"	"-0.68"	"-0.00071"	"11/128"	"11"	"128"	"278339.223876953"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"74.1534"	"24671"	"24671"	"24641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.8"	""	"41.9"	""	"32.3"	""	"24.5"	""	"34.8"	"43.9"	""	"1326"	"25"	"38.000"	"31.000"	"0.199302858864252"	"15"	"0.0002277"	"0.00118"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEISSMVLTK"	"[R].sFYPEEISSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1045.06787"	"2089.12847"	"2089.12915"	"-0.33"	"-0.00034"	"6/128"	"6"	"128"	"183160.79901123"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"74.4649"	"24798"	"24798"	"24769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.0"	""	"20.8"	""	"19.3"	""	"16.0"	""	"19.3"	"30.0"	""	"1317"	"34"	"38.000"	"31.000"	"0.0284155312091083"	"15"	"0.0003571"	"0.00152"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEISSMVLTK"	"[R].sFYPEEISSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"697.04791"	"2089.12918"	"2089.12915"	"0.02"	"0.00001"	"13/128"	"13"	"128"	"5583461.03070068"	"HCD"	"MS2"	"13.62965"	"141.7"	"100.000"	"74.1672"	"24676"	"24676"	"24657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"208.1"	""	"214.8"	""	"219.0"	""	"162.2"	""	"265.2"	"273.7"	""	"1321"	"39"	"38.000"	"31.000"	"0.0078320025816441"	"25"	"0"	"5.398E-06"	"1.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEISSMVLTK"	"[R].sFYPEEISSMVLTk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"1045.06873"	"2089.13017"	"2089.12915"	"0.49"	"0.00051"	"9/128"	"9"	"128"	"168979.377502441"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"74.4830"	"24857"	"24857"	"24831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.6"	""	"18.4"	""	"19.5"	""	"10.4"	""	"21.7"	"28.0"	""	"1316"	"31"	"38.000"	"31.000"	"0.0501447988596721"	"21"	"0.0002277"	"0.001124"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVVTGITPTPLGEGK"	"[K].yVVVTGITPTPLGEGk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"697.08228"	"2089.23227"	"2089.23091"	"0.65"	"0.00045"	"15/138"	"15"	"138"	"3140324.70648193"	"HCD"	"MS2"	"7.065324"	"108.1"	"100.000"	"60.7401"	"19202"	"19202"	"19177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.6"	""	"149.4"	""	"156.4"	""	"154.3"	""	"210.2"	"222.0"	""	"641"	"57"	"35.000"	"28.000"	"7.04414089227537E-05"	"19"	"0"	"8.852E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEDLYLKPIQR"	"[K].kEDLYLkPIQR.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"523.32837"	"2090.29165"	"2090.29407"	"-1.16"	"-0.00061"	"8/102"	"8"	"102"	"21554160.3606567"	"HCD"	"MS2"	"47.17543"	"532.0"	"70.580"	"37.3378"	"9685"	"9685"	"9656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"971.1"	""	"696.7"	""	"751.4"	""	"797.1"	"10.0"	"912.7"	"892.2"	""	"270"	"6"	"31.000"	"24.000"	"3.12848277745745"	"13"	"0"	"7.131E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"697.70801"	"2091.10947"	"2091.10842"	"0.50"	"0.00035"	"16/128"	"16"	"128"	"4427718.95306396"	"HCD"	"MS2"	"30.91715"	"133.5"	"100.000"	"57.8044"	"18061"	"18061"	"18037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"156.6"	""	"156.6"	""	"178.7"	""	"291.4"	""	"250.9"	"231.6"	""	"1341"	"48"	"38.000"	"31.000"	"0.00106267088554518"	"18"	"0"	"2.118E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"697.70874"	"2091.11167"	"2091.10842"	"1.56"	"0.00108"	"17/128"	"17"	"128"	"4236098.05535889"	"HCD"	"MS2"	"9.588395"	"140.4"	"100.000"	"57.5986"	"17923"	"17923"	"17899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.0"	""	"174.5"	""	"186.8"	""	"309.4"	"2.8"	"249.7"	"239.7"	""	"1347"	"37"	"38.000"	"31.000"	"0.0130718663855874"	"18"	"0"	"8.976E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEVSSMVLTK"	"[K].sFYPEEVSSmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1046.06006"	"2091.11284"	"2091.10842"	"2.12"	"0.00221"	"5/128"	"5"	"128"	"144849.818054199"	"HCD"	"MS2"	"100"	"10.7"	"100.000"	"58.2775"	"18201"	"18201"	"18171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.9"	""	"11.3"	""	"15.8"	""	"21.2"	""	"18.5"	"19.0"	""	"1362"	"15"	"38.000"	"31.000"	"1.9326228583687"	"13"	"0.0006037"	"0.003729"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAPSGFYIASGDISGK"	"[K].yAPSGFYIASGDISGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"697.70947"	"2091.11386"	"2091.11628"	"-1.15"	"-0.00080"	"13/140"	"13"	"140"	"10559596.1911621"	"HCD"	"MS2"	"8.254135"	"282.1"	"83.513"	"58.1087"	"18185"	"18185"	"18165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"388.4"	""	"368.5"	""	"373.3"	""	"509.8"	"5.9"	"503.6"	"522.6"	""	"1366"	"23"	"38.000"	"31.000"	"0.310042124172089"	"17"	"0"	"0.0001712"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAPSGFYIASGDISGK"	"[K].yAPSGFYIASGDISGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"1046.06067"	"2091.11406"	"2091.11628"	"-1.06"	"-0.00111"	"17/140"	"17"	"140"	"430728.50994873"	"HCD"	"MS2"	"0"	"32.9"	"100.000"	"57.8725"	"18035"	"18035"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.1"	""	"38.6"	""	"39.4"	""	"67.0"	""	"54.4"	"61.9"	""	"1368"	"41"	"38.000"	"31.000"	"0.00563710470668893"	"17"	"0"	"8.419E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAPSGFYIASGDISGK"	"[K].yAPSGFYIASGDISGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"697.70972"	"2091.11460"	"2091.11628"	"-0.80"	"-0.00056"	"14/140"	"14"	"140"	"10349710.0800781"	"HCD"	"MS2"	"10.3864"	"298.6"	"91.528"	"57.9071"	"18049"	"18049"	"18027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"387.8"	""	"397.8"	""	"419.9"	""	"522.8"	"1.8"	"547.8"	"551.5"	""	"1365"	"30"	"38.000"	"31.000"	"0.0736381137921857"	"18"	"0"	"0.0001185"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAPSGFYIASGDISGK"	"[K].yAPSGFYIASGDISGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"1046.06140"	"2091.11553"	"2091.11628"	"-0.36"	"-0.00038"	"16/140"	"16"	"140"	"558866.587463379"	"HCD"	"MS2"	"0"	"44.0"	"100.000"	"58.1266"	"18193"	"18193"	"18165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.1"	""	"53.9"	""	"57.3"	""	"69.6"	""	"88.3"	"85.9"	""	"1370"	"46"	"38.000"	"31.000"	"0.00178110930076821"	"25"	"0.0001889"	"0.0003749"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSALQWLTPEQTSGK"	"[K].sSALQWLTPEQTSGk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"697.71893"	"2091.14225"	"2091.14864"	"-3.06"	"-0.00213"	"17/156"	"17"	"156"	"4906998.91204834"	"HCD"	"MS2"	"28.12427"	"149.3"	"100.000"	"56.9404"	"17708"	"17708"	"17685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.7"	""	"178.7"	""	"194.1"	""	"244.0"	""	"275.7"	"271.4"	""	"1316"	"38"	"38.000"	"31.000"	"0.00993632741440009"	"17"	"0"	"8.52E-06"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSALQWLTPEQTSGK"	"[K].sSALQWLTPEQTSGk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"697.72076"	"2091.14774"	"2091.14864"	"-0.43"	"-0.00030"	"16/156"	"16"	"156"	"4746424.69689941"	"HCD"	"MS2"	"16.2599"	"150.7"	"100.000"	"56.7746"	"17586"	"17586"	"17563"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.8"	""	"192.7"	""	"191.9"	""	"251.8"	""	"282.2"	"273.9"	""	"1291"	"42"	"38.000"	"31.000"	"0.00396183374333875"	"22"	"0"	"1.505E-05"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAFGLPTTVAHVDGK"	"[K].yGAFGLPTTVAHVDGk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"697.72681"	"2091.16587"	"2091.16390"	"0.94"	"0.00066"	"16/132"	"16"	"132"	"4545491.0604248"	"HCD"	"MS2"	"6.482895"	"161.3"	"100.000"	"51.7322"	"15596"	"15596"	"15574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"261.3"	""	"244.9"	""	"217.5"	""	"225.3"	""	"270.9"	"308.9"	""	"1201"	"49"	"37.000"	"30.000"	"0.000840452187204856"	"23"	"0"	"2.599E-06"	"1.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGAFGLPTTVAHVDGK"	"[K].yGAFGLPTTVAHVDGk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"P24473"	"Glutathione S-transferase kappa 1 OS=Rattus norvegicus OX=10116 GN=Gstk1 PE=1 SV=3"	"0"	"3"	"3"	"0.9016"	"0.0000"	"1"	"1"	"1"	"697.72754"	"2091.16806"	"2091.16390"	"1.99"	"0.00139"	"20/132"	"20"	"132"	"2806381.54040527"	"HCD"	"MS2"	"30.19181"	"121.8"	"100.000"	"51.4700"	"15439"	"15439"	"15410"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.7"	""	"175.7"	""	"180.0"	""	"161.6"	"1.4"	"219.7"	"224.9"	""	"1176"	"61"	"37.000"	"30.000"	"5.08601136240107E-05"	"23"	"0"	"7.863E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKPGYLEQLPGMMR"	"[K].lkPGYLEQLPGMMR.[L]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.73315"	"2091.18491"	"2091.18589"	"-0.47"	"-0.00033"	"9/128"	"9"	"128"	"5298003.21435547"	"HCD"	"MS2"	"44.35096"	"224.5"	"100.000"	"56.5811"	"17507"	"17507"	"17483"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"367.7"	""	"297.6"	""	"323.3"	""	"324.1"	"2.2"	"382.6"	"427.9"	""	"1059"	"4"	"37.000"	"30.000"	"21.2748234344514"	"13"	"0"	"0.0001271"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APIRPDIVNFVHTNLR"	"[K].aPIRPDIVNFVHTNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"523.55585"	"2091.20156"	"2091.20246"	"-0.43"	"-0.00022"	"12/158"	"12"	"158"	"8808631.19128418"	"HCD"	"MS2"	"4.143311"	"109.8"	"100.000"	"48.4270"	"14204"	"14204"	"14176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.6"	""	"165.7"	""	"166.2"	""	"198.4"	"1.1"	"183.3"	"156.0"	""	"897"	"23"	"36.000"	"29.000"	"0.235918743976232"	"14"	"0"	"5.969E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APIRPDIVNFVHTNLR"	"[K].aPIRPDIVNFVHTNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"523.55646"	"2091.20400"	"2091.20246"	"0.74"	"0.00039"	"17/158"	"17"	"158"	"9981098.46923828"	"HCD"	"MS2"	"10.43483"	"115.2"	"100.000"	"48.7637"	"14389"	"14389"	"14367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.9"	""	"190.8"	""	"162.6"	""	"221.2"	""	"185.0"	"157.0"	""	"887"	"26"	"36.000"	"29.000"	"0.106388239958514"	"14"	"0"	"2.61E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSGFIPVKPSVK"	"[K].mVSGFIPVkPSVk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.09662"	"2092.27530"	"2092.28073"	"-2.59"	"-0.00181"	"9/120"	"9"	"120"	"8297929.65686035"	"HCD"	"MS2"	"0"	"452.8"	"100.000"	"46.2752"	"13323"	"13323"	"13304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"637.1"	""	"671.7"	""	"514.1"	""	"1082.3"	"4.1"	"736.2"	"636.2"	""	"306"	"20"	"31.000"	"24.000"	"0.1716688235082"	"14"	"0.0009404"	"0.01028"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSGFIPVKPSVK"	"[K].mVSGFIPVkPSVk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.09723"	"2092.27713"	"2092.28073"	"-1.72"	"-0.00120"	"9/120"	"9"	"120"	"9635495.1383667"	"HCD"	"MS2"	"2.156879"	"292.5"	"59.713"	"46.5714"	"13492"	"13492"	"13474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"400.2"	""	"443.9"	""	"327.6"	""	"685.9"	"1.6"	"493.2"	"414.9"	""	"297"	"18"	"31.000"	"24.000"	"0.248729017089926"	"14"	"0.004346"	"0.1157"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPILHQDWLNGR"	"[R].sVSELPILHQDWLNGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.38275"	"2093.13370"	"2093.13410"	"-0.19"	"-0.00013"	"16/152"	"16"	"152"	"4887420.09069824"	"HCD"	"MS2"	"2.921606"	"84.9"	"100.000"	"62.3885"	"19928"	"19928"	"19907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.6"	""	"113.4"	""	"116.7"	""	"134.3"	""	"144.9"	"151.4"	""	"1316"	"48"	"38.000"	"31.000"	"0.00108699086323469"	"16"	"0"	"3.528E-06"	"1.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPILHQDWLNGR"	"[R].sVSELPILHQDWLNGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9571"	"0.0000"	"1"	"1"	"1"	"698.38293"	"2093.13425"	"2093.13410"	"0.07"	"0.00005"	"17/152"	"17"	"152"	"5924079.28552246"	"HCD"	"MS2"	"7.175731"	"77.2"	"100.000"	"62.2080"	"19802"	"19802"	"19785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.2"	""	"97.7"	""	"114.4"	""	"112.7"	""	"126.8"	"141.7"	""	"1311"	"70"	"38.000"	"31.000"	"6.27440713733771E-06"	"20"	"0"	"8.763E-07"	"1.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPILHQDWLNGR"	"[R].sVSELPILHQDWLNGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"698.38330"	"2093.13535"	"2093.13410"	"0.60"	"0.00042"	"14/152"	"14"	"152"	"3590281.64294434"	"HCD"	"MS2"	"8.419477"	"100.3"	"100.000"	"62.0841"	"19804"	"19804"	"19779"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.3"	""	"134.7"	""	"123.5"	""	"161.6"	""	"185.7"	"182.2"	""	"1307"	"53"	"38.000"	"31.000"	"0.000343752283586327"	"18"	"0"	"3.389E-06"	"1.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITHLNNNFMFGQK"	"[R].aITHLNNNFMFGQk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"698.38330"	"2093.13535"	"2093.13664"	"-0.61"	"-0.00043"	"12/120"	"12"	"120"	"8215241.64318848"	"HCD"	"MS2"	"11.33954"	"246.5"	"100.000"	"47.2405"	"13766"	"13766"	"13746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"387.0"	""	"288.0"	""	"228.6"	""	"336.4"	""	"529.4"	"581.4"	""	"1307"	"48"	"38.000"	"31.000"	"0.000975541146659875"	"21"	"0"	"5.911E-06"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPILHQDWLNGR"	"[R].sVSELPILHQDWLNGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"698.38336"	"2093.13553"	"2093.13410"	"0.68"	"0.00048"	"17/152"	"17"	"152"	"2688078.27868652"	"HCD"	"MS2"	"19.90393"	"93.4"	"100.000"	"61.9135"	"19681"	"19681"	"19657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.8"	""	"135.2"	""	"127.0"	""	"138.4"	""	"169.2"	"165.7"	""	"1305"	"46"	"38.000"	"31.000"	"0.00151210000910443"	"18"	"0"	"1.037E-06"	"1.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITHLNNNFMFGQK"	"[R].aITHLNNNFMFGQk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"698.38348"	"2093.13590"	"2093.13664"	"-0.35"	"-0.00025"	"12/120"	"12"	"120"	"7609180.45715332"	"HCD"	"MS2"	"16.78285"	"235.5"	"100.000"	"46.9423"	"13596"	"13596"	"13576"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"386.2"	""	"269.8"	""	"231.0"	""	"317.6"	""	"502.2"	"533.8"	""	"1300"	"48"	"38.000"	"31.000"	"0.00108121822274061"	"17"	"0"	"7.281E-06"	"1.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPILHQDWLNGR"	"[R].sVSELPILHQDWLnGR.[T]"	"N-Term(TMT6plex); N14(Deamidated)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.2679"	"0.0000"	"1"	"1"	"1"	"698.71014"	"2094.11588"	"2094.11812"	"-1.07"	"-0.00075"	"17/152"	"17"	"152"	"2033643.28961182"	"HCD"	"MS2"	"34.12829"	"50.7"	"100.000"	"64.3655"	"20736"	"20736"	"20707"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.3"	""	"61.8"	""	"65.9"	""	"86.2"	"2.2"	"81.6"	"97.6"	""	"1260"	"56"	"37.000"	"31.000"	"0.000161190910875055"	"19"	"0"	"1.765E-06"	"1.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPILHQDWLNGR"	"[R].sVSELPILHQDWLnGR.[T]"	"N-Term(TMT6plex); N14(Deamidated)"	"1"	"1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20759"	"Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"698.71021"	"2094.11606"	"2094.11812"	"-0.98"	"-0.00069"	"17/152"	"17"	"152"	"1964418.39898682"	"HCD"	"MS2"	"22.48186"	"67.3"	"100.000"	"64.3163"	"20663"	"20663"	"20633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.8"	""	"83.9"	""	"88.7"	""	"113.1"	""	"113.6"	"122.9"	""	"1281"	"32"	"38.000"	"31.000"	"0.0385051778858039"	"15"	"0"	"3.148E-06"	"1.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQVQIDHYLGLANK"	"[R].hQVQIDHYLGLANk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"698.73279"	"2094.18381"	"2094.18603"	"-1.06"	"-0.00074"	"12/128"	"12"	"128"	"646187.270935059"	"HCD"	"MS2"	"0"	"52.5"	"100.000"	"38.8575"	"10309"	"10309"	"10278"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.9"	""	"64.6"	""	"72.1"	""	"93.3"	"0.5"	"98.5"	"96.5"	""	"935"	"35"	"36.000"	"29.000"	"0.0141508202763736"	"18"	"0"	"5.47E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGFGEMLQAVPLADSFR"	"[R].qGFGEMLQAVPLADSFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"699.03259"	"2095.08323"	"2095.08438"	"-0.55"	"-0.00038"	"15/180"	"15"	"180"	"970860.615661621"	"HCD"	"MS2"	"35.96033"	"23.6"	"100.000"	"78.8569"	"26630"	"26630"	"26607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.1"	""	"30.2"	""	"35.6"	""	"27.3"	"1.5"	"47.1"	"49.4"	""	"1214"	"24"	"37.000"	"30.000"	"0.269891179353749"	"15"	"0"	"8.681E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGFGEMLQAVPLADSFR"	"[R].qGFGEMLQAVPLADSFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1048.04565"	"2095.08403"	"2095.08438"	"-0.16"	"-0.00017"	"6/180"	"6"	"180"	"80658.6337280273"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"78.9221"	"26606"	"26606"	"26577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"6.2"	""	"3.8"	""	"4.2"	""	"8.0"	"7.3"	""	"1221"	"19"	"37.000"	"30.000"	"0.747628189651312"	"14"	"0.0003839"	"0.002019"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGFGEMLQAVPLADSFR"	"[R].qGFGEMLQAVPLADSFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"699.03387"	"2095.08707"	"2095.08438"	"1.29"	"0.00090"	"16/180"	"16"	"180"	"989913.622741699"	"HCD"	"MS2"	"16.11328"	"22.6"	"100.000"	"78.9017"	"26597"	"26597"	"26577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.8"	""	"31.6"	""	"36.9"	""	"22.6"	""	"48.4"	"49.5"	""	"1233"	"26"	"37.000"	"30.000"	"0.157012085071868"	"15"	"0"	"2.828E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNLPGAAVDLPAVSEK"	"[K].gVNLPGAAVDLPAVSEk.[D]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"699.07629"	"2095.21433"	"2095.21633"	"-0.95"	"-0.00067"	"17/168"	"17"	"168"	"3555144.3336792"	"HCD"	"MS2"	"6.578622"	"106.3"	"100.000"	"60.7702"	"19214"	"19214"	"19193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.0"	""	"140.0"	""	"142.7"	""	"168.8"	""	"188.6"	"202.8"	""	"729"	"56"	"35.000"	"28.000"	"0.000102493785268041"	"22"	"0"	"8.627E-07"	"1.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNLPGAAVDLPAVSEK"	"[K].gVNLPGAAVDLPAVSEk.[D]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"699.07709"	"2095.21671"	"2095.21633"	"0.18"	"0.00013"	"17/168"	"17"	"168"	"3515303.85803223"	"HCD"	"MS2"	"21.31713"	"104.0"	"100.000"	"60.8623"	"19305"	"19305"	"19283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.7"	""	"143.6"	""	"142.5"	""	"146.8"	""	"181.6"	"200.6"	""	"709"	"68"	"35.000"	"28.000"	"5.96507954649481E-06"	"23"	"0"	"4.987E-07"	"1.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPFKDIILYVK"	"[R].gDPFkDIILYVk.[E]"	"N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.09619"	"2095.27402"	"2095.27702"	"-1.43"	"-0.00100"	"6/110"	"6"	"110"	"1541948.02807617"	"HCD"	"MS2"	"15.71879"	"104.0"	"100.000"	"73.5723"	"24485"	"24485"	"24463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.9"	""	"159.5"	""	"177.0"	""	"155.4"	""	"164.4"	"163.4"	""	"307"	"6"	"31.000"	"24.000"	"3.54085693468531"	"13"	"0.0001889"	"0.0009464"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPFKDIILYVK"	"[R].gDPFkDIILYVk.[E]"	"N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.09692"	"2095.27622"	"2095.27702"	"-0.38"	"-0.00027"	"11/110"	"11"	"110"	"1774490.04449463"	"HCD"	"MS2"	"14.35265"	"125.8"	"100.000"	"73.6252"	"24455"	"24455"	"24433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.0"	""	"203.6"	""	"223.1"	""	"199.3"	"0.6"	"173.9"	"191.0"	""	"291"	"7"	"31.000"	"24.000"	"2.73440596844876"	"13"	"0.0002277"	"0.001332"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPPLIPFMPLLIK"	"[K].lEPPLIPFmPLLIk.[D]"	"N-Term(TMT6plex); M9(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q9Z1C7"	"Rap guanine nucleotide exchange factor 4 (Fragment) OS=Rattus norvegicus OX=10116 GN=Rapgef4 PE=2 SV=1"	"Q9Z1C7"	"Rap guanine nucleotide exchange factor 4 (Fragment) OS=Rattus norvegicus OX=10116 GN=Rapgef4 PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"699.10480"	"2095.29984"	"2095.30051"	"-0.32"	"-0.00022"	"9/104"	"9"	"104"	"103792.566833496"	"HCD"	"MS2"	"8.217558"	"3.6"	"100.000"	"93.8804"	"32376"	"32376"	"32367"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	"3.9"	""	"5.3"	""	"7.4"	""	"8.0"	"6.4"	""	"183"	"25"	"29.000"	"22.000"	"0.0320199827830947"	"19"	"0.002829"	"0.04729"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPPLIPFMPLLIK"	"[K].lEPPLIPFmPLLIk.[D]"	"N-Term(TMT6plex); M9(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q9Z1C7"	"Rap guanine nucleotide exchange factor 4 (Fragment) OS=Rattus norvegicus OX=10116 GN=Rapgef4 PE=2 SV=1"	"Q9Z1C7"	"Rap guanine nucleotide exchange factor 4 (Fragment) OS=Rattus norvegicus OX=10116 GN=Rapgef4 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.10541"	"2095.30167"	"2095.30051"	"0.55"	"0.00039"	"8/104"	"8"	"104"	"121827.036560059"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"93.6872"	"32285"	"32285"	"32276"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.0"	""	"3.3"	""	"2.1"	""	"7.7"	""	"5.6"	"6.2"	""	"177"	"20"	"29.000"	"22.000"	"0.0924577394010409"	"14"	"0.003383"	"0.07624"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWNDGYPWDMVVITR"	"[R].vWNDGYPWDmVVITR.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.35449"	"2096.04892"	"2096.04726"	"0.79"	"0.00055"	"12/156"	"12"	"156"	"353655.594787598"	"HCD"	"MS2"	"48.85213"	"24.2"	"100.000"	"72.8545"	"24141"	"24141"	"24113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.4"	""	"35.6"	""	"43.6"	""	"33.0"	""	"40.8"	"39.8"	""	"1072"	"8"	"37.000"	"30.000"	"9.18681116824515"	"13"	"0.000494"	"0.00272"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFIQYLLEQEVPGSR"	"[K].tSFIQYLLEQEVPGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9298"	"0.0000"	"1"	"1"	"1"	"699.37769"	"2096.11850"	"2096.12254"	"-1.92"	"-0.00134"	"14/170"	"14"	"170"	"682185.105957031"	"HCD"	"MS2"	"14.95418"	"6.1"	"100.000"	"86.9428"	"29867"	"29867"	"29838"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	""	"7.1"	""	"9.4"	""	"9.8"	""	"9.9"	"14.2"	""	"1317"	"57"	"38.000"	"31.000"	"0.000117911395488224"	"20"	"0"	"3.266E-06"	"1.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFIQYLLEQEVPGSR"	"[K].tSFIQYLLEQEVPGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"699.37836"	"2096.12052"	"2096.12254"	"-0.96"	"-0.00067"	"14/170"	"14"	"170"	"577552.306396484"	"HCD"	"MS2"	"3.988571"	"5.1"	"100.000"	"87.3314"	"30076"	"30076"	"30059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.8"	""	"6.5"	""	"5.3"	""	"8.6"	""	"10.8"	"8.8"	""	"1329"	"50"	"38.000"	"31.000"	"0.000670648542797957"	"22"	"0"	"2.581E-05"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFIQYLLEQEVPGSR"	"[K].tSFIQYLLEQEVPGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"699.37842"	"2096.12070"	"2096.12254"	"-0.88"	"-0.00061"	"15/170"	"15"	"170"	"566101.568969727"	"HCD"	"MS2"	"4.658618"	"6.6"	"100.000"	"87.0294"	"29953"	"29953"	"29933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"8.3"	""	"10.2"	""	"9.8"	""	"14.1"	"13.0"	""	"1331"	"51"	"38.000"	"31.000"	"0.000589044438342421"	"21"	"0"	"2.827E-06"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFIQYLLEQEVPGSR"	"[K].tSFIQYLLEQEVPGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"1048.56458"	"2096.12187"	"2096.12254"	"-0.32"	"-0.00033"	"5/170"	"5"	"170"	"80685.0293579102"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"87.1078"	"29985"	"29985"	"29961"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	"4.4"	""	"4.7"	""	"2.3"	""	"7.0"	"5.9"	""	"1308"	"17"	"38.000"	"31.000"	"1.35075862190009"	"18"	"0.0005564"	"0.003635"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFIQYLLEQEVPGSR"	"[K].tSFIQYLLEQEVPGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1048.56482"	"2096.12236"	"2096.12254"	"-0.08"	"-0.00009"	"3/170"	"3"	"170"	"75057.4067382813"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"87.4098"	"30107"	"30107"	"30087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"4.4"	""	"5.4"	""	"5.3"	""	"3.3"	"5.8"	""	"1328"	"2"	"38.000"	"31.000"	"43.0693263876031"	"13"	"0.004323"	"0.1145"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFIQYLLEQEVPGSR"	"[K].tSFIQYLLEQEVPGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"699.37903"	"2096.12253"	"2096.12254"	"0.00"	"0.00000"	"15/170"	"15"	"170"	"966372.109985352"	"HCD"	"MS2"	"1.025977"	"7.8"	"100.000"	"87.2311"	"29983"	"29983"	"29967"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.7"	""	"7.6"	""	"11.7"	""	"16.5"	""	"16.2"	"14.5"	""	"1324"	"49"	"38.000"	"31.000"	"0.00084305903963303"	"20"	"0"	"8.935E-06"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQPDMAIMAVNSFVK"	"[K].sQPDMAIMAVNSFVk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"699.37921"	"2096.12308"	"2096.12844"	"-2.56"	"-0.00179"	"13/160"	"13"	"160"	"795738.489135742"	"HCD"	"MS2"	"5.850589"	"41.1"	"100.000"	"70.4588"	"23162"	"23162"	"23139"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.4"	""	"59.0"	""	"59.5"	""	"58.8"	""	"67.7"	"73.0"	""	"1316"	"31"	"38.000"	"31.000"	"0.0560048829137164"	"18"	"0"	"0.0001045"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFIQYLLEQEVPGSR"	"[K].tSFIQYLLEQEVPGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1048.56543"	"2096.12358"	"2096.12254"	"0.50"	"0.00052"	"7/170"	"7"	"170"	"64914.3240356445"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"87.3555"	"30034"	"30034"	"30013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"2.9"	""	"5.8"	""	"6.1"	""	"3.1"	"5.8"	""	"1314"	"2"	"38.000"	"31.000"	"43.2081199142511"	"13"	"0.0008731"	"0.0085"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQPDMAIMAVNSFVK"	"[K].sQPDMAIMAVNSFVk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"699.38013"	"2096.12583"	"2096.12844"	"-1.25"	"-0.00087"	"15/160"	"15"	"160"	"2473657.50653076"	"HCD"	"MS2"	"10.33573"	"78.8"	"100.000"	"70.1088"	"23071"	"23071"	"23050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"113.5"	""	"103.6"	""	"117.0"	""	"99.5"	"0.9"	"157.8"	"155.0"	""	"1284"	"53"	"38.000"	"31.000"	"0.000329257008522456"	"18"	"0"	"4.087E-06"	"1.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFIQYLLEQEVPGSR"	"[K].tSFIQYLLEQEVPGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1048.56714"	"2096.12700"	"2096.12254"	"2.13"	"0.00223"	"6/170"	"6"	"170"	"98025.7965698242"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"87.0167"	"29897"	"29897"	"29870"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"5.4"	""	"7.3"	""	"7.4"	""	"12.9"	"8.7"	""	"1296"	"21"	"38.000"	"31.000"	"0.524294142667592"	"14"	"0.0001889"	"0.0007016"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQPDMAIMAVNSFVK"	"[K].sQPDMAIMAVNSFVk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"699.38080"	"2096.12784"	"2096.12844"	"-0.28"	"-0.00020"	"15/160"	"15"	"160"	"2745717.58093262"	"HCD"	"MS2"	"24.86748"	"85.5"	"100.000"	"70.1426"	"23033"	"23033"	"23011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.7"	""	"101.4"	""	"118.1"	""	"115.2"	""	"168.7"	"187.6"	""	"1296"	"56"	"38.000"	"31.000"	"0.000160536949334637"	"20"	"0"	"3.049E-06"	"1.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDYVATSINEAVTK"	"[K].nLDYVATSINEAVTk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"3"	"3"	"0.7959"	"0.0000"	"1"	"1"	"1"	"699.39221"	"2096.16208"	"2096.16396"	"-0.89"	"-0.00062"	"13/162"	"13"	"162"	"2315275.55548096"	"HCD"	"MS2"	"8.350796"	"84.0"	"100.000"	"63.3113"	"20252"	"20252"	"20233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.1"	""	"104.5"	""	"116.5"	""	"134.8"	""	"148.2"	"170.2"	""	"1112"	"49"	"37.000"	"30.000"	"0.000641320011348526"	"25"	"0"	"2.091E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELATVLSDQPGLLGPK"	"[K].eLATVLSDQPGLLGPk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"4"	"4"	"0.9655"	"0.0000"	"1"	"1"	"1"	"524.81390"	"2096.23379"	"2096.23673"	"-1.40"	"-0.00074"	"15/148"	"15"	"148"	"2292342.58184814"	"HCD"	"MS2"	"10.68035"	"41.8"	"100.000"	"68.1147"	"22257"	"22257"	"22234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.1"	""	"54.2"	""	"61.2"	""	"72.8"	"0.3"	"78.4"	"78.6"	""	"593"	"58"	"34.000"	"27.000"	"4.5816794132314E-05"	"18"	"0"	"3.233E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELATVLSDQPGLLGPK"	"[K].eLATVLSDQPGLLGPk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"3"	"3"	"0.9861"	"0.0000"	"1"	"1"	"1"	"699.41644"	"2096.23478"	"2096.23673"	"-0.93"	"-0.00065"	"17/148"	"17"	"148"	"4176553.38757324"	"HCD"	"MS2"	"16.75646"	"115.3"	"100.000"	"68.0801"	"22243"	"22243"	"22218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.3"	""	"155.8"	""	"159.0"	""	"181.7"	"3.1"	"207.4"	"211.5"	""	"589"	"72"	"34.000"	"27.000"	"1.84963186670522E-06"	"18"	"0"	"1.537E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELATVLSDQPGLLGPK"	"[K].eLATVLSDQPGLLGPk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"4"	"4"	"0.9322"	"0.0000"	"1"	"1"	"1"	"524.81488"	"2096.23769"	"2096.23673"	"0.46"	"0.00024"	"15/148"	"15"	"148"	"1915622.03033447"	"HCD"	"MS2"	"12.43025"	"38.0"	"100.000"	"68.2197"	"22249"	"22249"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.4"	""	"54.7"	""	"48.3"	""	"65.8"	"0.2"	"74.3"	"74.9"	""	"564"	"59"	"34.000"	"27.000"	"3.56655649986865E-05"	"21"	"0"	"4.566E-06"	"1.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELATVLSDQPGLLGPK"	"[K].eLATVLSDQPGLLGPk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"699.41742"	"2096.23771"	"2096.23673"	"0.47"	"0.00033"	"16/148"	"16"	"148"	"2930735.800354"	"HCD"	"MS2"	"9.63247"	"92.1"	"100.000"	"68.1805"	"22233"	"22233"	"22202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.6"	""	"114.9"	""	"113.1"	""	"145.3"	"0.5"	"184.2"	"186.5"	""	"564"	"48"	"34.000"	"27.000"	"0.000400174221116324"	"17"	"0"	"3.005E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAAQVLVGIPLETGQK"	"[R].nAAQVLVGIPLETGQk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"3"	"3"	"0.9796"	"0.0000"	"1"	"1"	"1"	"699.42017"	"2096.24594"	"2096.24796"	"-0.96"	"-0.00067"	"16/152"	"16"	"152"	"2339665.29388428"	"HCD"	"MS2"	"14.63886"	"75.4"	"100.000"	"61.9366"	"19744"	"19744"	"19715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.0"	""	"96.7"	""	"108.1"	""	"131.1"	""	"139.2"	"131.4"	""	"500"	"49"	"33.000"	"26.000"	"0.000322062387923283"	"16"	"0"	"6.641E-06"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAAQVLVGIPLETGQK"	"[R].nAAQVLVGIPLETGQk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.42120"	"2096.24906"	"2096.24796"	"0.52"	"0.00037"	"16/152"	"16"	"152"	"1477140.81994629"	"HCD"	"MS2"	"4.433631"	"55.3"	"100.000"	"61.8790"	"19667"	"19667"	"19641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.0"	""	"69.5"	""	"75.7"	""	"91.3"	"2.5"	"102.0"	"100.8"	""	"487"	"50"	"33.000"	"26.000"	"0.000228296348686452"	"16"	"0"	"7.093E-06"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPIVPDLGLQIHYLR"	"[R].fSPIVPDLGLQIHYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZXK7"	"E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus OX=10116 GN=Rnf123 PE=1 SV=1"	"D3ZXK7"	"E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus OX=10116 GN=Rnf123 PE=1 SV=1"	"0"	"3"	"3"	"0.9636"	"0.0000"	"1"	"1"	"1"	"699.73962"	"2097.20432"	"2097.20581"	"-0.71"	"-0.00050"	"17/140"	"17"	"140"	"579764.715698242"	"HCD"	"MS2"	"7.78407"	"24.6"	"100.000"	"73.3922"	"24360"	"24360"	"24337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.7"	""	"36.9"	""	"38.3"	""	"36.3"	""	"49.4"	"44.9"	""	"831"	"55"	"36.000"	"29.000"	"0.000133835408277827"	"17"	"0"	"7.605E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPIVPDLGLQIHYLR"	"[R].fSPIVPDLGLQIHYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZXK7"	"E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus OX=10116 GN=Rnf123 PE=1 SV=1"	"D3ZXK7"	"E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus OX=10116 GN=Rnf123 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.74023"	"2097.20615"	"2097.20581"	"0.16"	"0.00011"	"16/140"	"16"	"140"	"702413.432983398"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"73.4708"	"24444"	"24444"	"24415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.9"	""	"61.7"	""	"60.8"	""	"62.0"	""	"72.6"	"66.9"	""	"822"	"20"	"36.000"	"29.000"	"0.451691400006766"	"14"	"0"	"0.0001576"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFSDEFIFLPGNTLR"	"[R].nVFSDEFIFLPGNTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES71"	"Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1"	"Q9ES71"	"Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1049.56030"	"2098.11333"	"2098.11706"	"-1.78"	"-0.00186"	"5/170"	"5"	"170"	"85604.4027709961"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"83.8311"	"28659"	"28659"	"28631"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.7"	""	"7.1"	""	"5.6"	""	"5.4"	""	"10.0"	"5.0"	""	"1307"	"12"	"38.000"	"31.000"	"4.54198391544279"	"13"	"0.002829"	"0.04604"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFSDEFIFLPGNTLR"	"[R].nVFSDEFIFLPGNTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES71"	"Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1"	"Q9ES71"	"Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1049.56067"	"2098.11406"	"2098.11706"	"-1.43"	"-0.00150"	"5/170"	"5"	"170"	"80353.9302368164"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"83.7212"	"28563"	"28563"	"28538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.0"	""	"6.5"	""	"6.6"	""	"7.6"	""	"8.5"	"8.1"	""	"1310"	"23"	"38.000"	"31.000"	"0.295284941474657"	"14"	"0.0008731"	"0.008589"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPYSGQSVSLFQALK"	"[R].dPYSGQSVSLFQALk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"700.05450"	"2098.14896"	"2098.15848"	"-4.54"	"-0.00317"	"13/146"	"13"	"146"	"1804879.86602783"	"HCD"	"MS2"	"0"	"65.8"	"100.000"	"67.4594"	"21990"	"21990"	"21965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.2"	""	"75.9"	""	"100.9"	""	"98.4"	"0.6"	"113.5"	"124.6"	""	"1170"	"56"	"37.000"	"30.000"	"0.000139045156767555"	"21"	"0"	"5.333E-06"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPYSGQSVSLFQALK"	"[R].dPYSGQSVSLFQALk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9298"	"0.0000"	"1"	"1"	"1"	"700.05640"	"2098.15464"	"2098.15848"	"-1.83"	"-0.00128"	"15/146"	"15"	"146"	"1245789.95458984"	"HCD"	"MS2"	"0"	"53.9"	"100.000"	"67.5520"	"21977"	"21977"	"21955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.4"	""	"71.9"	""	"73.9"	""	"85.1"	""	"100.6"	"103.7"	""	"1156"	"57"	"37.000"	"30.000"	"0.000122723529903613"	"20"	"0"	"1.324E-05"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLAGRDLTDYLMK"	"[R].lDLAGRDLTDYLmk.[I]"	"N-Term(TMT6plex); M13(Oxidation); K14(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"700.05792"	"2098.15921"	"2098.16185"	"-1.26"	"-0.00088"	"6/136"	"6"	"136"	"1552424.00439453"	"HCD"	"MS2"	"17.4284"	"82.8"	"100.000"	"64.9810"	"20987"	"20987"	"20963"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.7"	""	"107.6"	""	"101.1"	""	"168.6"	"0.8"	"145.7"	"151.2"	""	"1142"	"17"	"37.000"	"30.000"	"1.24347228001365"	"16"	"0.001058"	"0.01424"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLFTPDMAFEAIVK"	"[R].tGLFTPDMAFEAIVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1049.58508"	"2098.16289"	"2098.16587"	"-1.42"	"-0.00149"	"8/132"	"8"	"132"	"88107.1658325195"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"84.6260"	"28983"	"28983"	"28960"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"9.4"	""	"9.7"	""	"3.7"	""	"6.4"	"6.9"	""	"1130"	"12"	"37.000"	"30.000"	"3.31168062950427"	"13"	"0.0006037"	"0.003812"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLFTPDMAFEAIVK"	"[R].tGLFTPDMAFEAIVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.05963"	"2098.16434"	"2098.16587"	"-0.73"	"-0.00051"	"12/132"	"12"	"132"	"820837.632751465"	"HCD"	"MS2"	"47.71984"	"28.9"	"100.000"	"84.5114"	"28885"	"28885"	"28860"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.1"	""	"38.9"	""	"43.3"	""	"30.7"	""	"52.0"	"64.3"	""	"1135"	"30"	"37.000"	"30.000"	"0.0586092097769593"	"14"	"0"	"7.395E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLAGRDLTDYLMK"	"[R].lDLAGRDLTDYLmk.[I]"	"N-Term(TMT6plex); M13(Oxidation); K14(TMT6plex)"	"2"	"6"	"P60711; P62738"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"700.05963"	"2098.16434"	"2098.16185"	"1.19"	"0.00083"	"12/136"	"12"	"136"	"1899876.61376953"	"HCD"	"MS2"	"6.29769"	"97.5"	"100.000"	"65.0032"	"20943"	"20943"	"20921"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.8"	""	"132.7"	""	"125.7"	""	"208.6"	""	"161.4"	"169.5"	""	"1135"	"21"	"37.000"	"30.000"	"0.410171863544232"	"16"	"0.0003571"	"0.001483"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLFTPDMAFEAIVK"	"[R].tGLFTPDMAFEAIVk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"700.06030"	"2098.16635"	"2098.16587"	"0.23"	"0.00016"	"10/132"	"10"	"132"	"737206.972473145"	"HCD"	"MS2"	"22.61474"	"26.7"	"100.000"	"84.5568"	"28955"	"28955"	"28929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.9"	""	"33.7"	""	"40.8"	""	"30.9"	""	"58.5"	"56.9"	""	"1133"	"31"	"37.000"	"30.000"	"0.0477749140273462"	"16"	"0.0001859"	"0.0003452"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTGHLEEVVLAMLK"	"[K].aLTGHLEEVVLAmLk.[T]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.31219"	"2098.22695"	"2098.23462"	"-3.66"	"-0.00192"	"12/122"	"12"	"122"	"2388307.30102539"	"HCD"	"MS2"	"17.31521"	"44.5"	"100.000"	"69.9108"	"22990"	"22990"	"22970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.5"	""	"43.1"	""	"49.9"	""	"111.4"	""	"92.6"	"86.4"	""	"646"	"39"	"35.000"	"28.000"	"0.00455200281890265"	"15"	"0"	"9.574E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTGHLEEVVLAMLK"	"[K].aLTGHLEEVVLAmLk.[T]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.08185"	"2098.23099"	"2098.23462"	"-1.73"	"-0.00121"	"13/122"	"13"	"122"	"2945226.55096436"	"HCD"	"MS2"	"22.36642"	"70.6"	"100.000"	"71.4806"	"23631"	"23631"	"23610"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.3"	""	"65.2"	""	"76.7"	""	"183.1"	""	"139.2"	"139.0"	""	"626"	"28"	"34.000"	"27.000"	"0.0446215176797485"	"14"	"0"	"4.959E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTGHLEEVVLAMLK"	"[K].aLTGHLEEVVLAmLk.[T]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.31335"	"2098.23159"	"2098.23462"	"-1.44"	"-0.00076"	"12/122"	"12"	"122"	"2308005.96746826"	"HCD"	"MS2"	"7.028064"	"33.6"	"100.000"	"71.4393"	"23614"	"23614"	"23594"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.2"	""	"26.0"	""	"30.4"	""	"110.0"	"0.9"	"65.1"	"60.5"	""	"625"	"31"	"34.000"	"27.000"	"0.0240353262589566"	"14"	"0"	"3.117E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTGHLEEVVLAMLK"	"[K].aLTGHLEEVVLAmLk.[T]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.08209"	"2098.23172"	"2098.23462"	"-1.38"	"-0.00097"	"12/122"	"12"	"122"	"2681721.89550781"	"HCD"	"MS2"	"23.20122"	"68.7"	"100.000"	"71.5494"	"23607"	"23607"	"23587"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.3"	""	"65.7"	""	"71.3"	""	"189.6"	""	"131.2"	"127.1"	""	"625"	"26"	"34.000"	"27.000"	"0.0746191025910369"	"14"	"0"	"2.545E-05"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTGHLEEVVLAMLK"	"[K].aLTGHLEEVVLAmLk.[T]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"4"	"4"	"0.9333"	"0.0000"	"1"	"1"	"1"	"525.31366"	"2098.23281"	"2098.23462"	"-0.86"	"-0.00045"	"12/122"	"12"	"122"	"2766302.27734375"	"HCD"	"MS2"	"27.98444"	"41.9"	"100.000"	"70.1034"	"23017"	"23017"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.2"	""	"29.2"	""	"40.1"	""	"122.0"	"0.2"	"82.8"	"81.1"	""	"607"	"45"	"34.000"	"27.000"	"0.000914447328340487"	"18"	"0"	"5.827E-06"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTGHLEEVVLAMLK"	"[K].aLTGHLEEVVLAmLk.[T]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"4"	"4"	"0.9231"	"0.0000"	"1"	"1"	"1"	"525.31396"	"2098.23403"	"2098.23462"	"-0.28"	"-0.00015"	"12/122"	"12"	"122"	"2622915.54058838"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"71.5584"	"23611"	"23611"	"23587"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.7"	""	"24.9"	""	"28.1"	""	"111.1"	""	"69.2"	"60.7"	""	"603"	"39"	"34.000"	"27.000"	"0.0036668007919488"	"18"	"0"	"1.584E-05"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTGHLEEVVLAMLK"	"[K].aLTGHLEEVVLAmLk.[T]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"4"	"4"	"0.9444"	"0.0000"	"1"	"1"	"1"	"525.31403"	"2098.23427"	"2098.23462"	"-0.16"	"-0.00009"	"6/122"	"6"	"122"	"661335.58996582"	"HCD"	"MS2"	"29.162"	"18.8"	"100.000"	"70.2494"	"23129"	"23129"	"23098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.0"	""	"19.6"	""	"22.4"	""	"36.4"	""	"33.3"	"45.1"	""	"604"	"36"	"34.000"	"27.000"	"0.00687079424093166"	"17"	"0.0001889"	"0.0004629"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFFYDSENPPGSEVLR"	"[R].iFFYDSENPPGSEVLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"P55159"	"Serum paraoxonase/arylesterase 1 OS=Rattus norvegicus OX=10116 GN=Pon1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1050.03491"	"2099.06255"	"2099.06469"	"-1.02"	"-0.00107"	"5/152"	"5"	"152"	"108310.629577637"	"HCD"	"MS2"	"100"	"5.6"	"100.000"	"67.8147"	"22135"	"22135"	"22106"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"7.2"	""	"9.7"	""	"7.2"	""	"7.7"	"11.2"	""	"1215"	"5"	"37.000"	"30.000"	"18.2619135384665"	"13"	"0.002361"	"0.03488"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVIPMNPNTDDLFK"	"[R].hVIPMNPNTDDLFk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"700.38306"	"2099.13462"	"2099.13597"	"-0.64"	"-0.00045"	"12/124"	"12"	"124"	"10819355.2344971"	"HCD"	"MS2"	"33.95485"	"238.9"	"58.215"	"48.9117"	"14402"	"14402"	"14383"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"325.2"	""	"320.0"	""	"306.0"	""	"373.5"	"2.0"	"482.6"	"457.1"	""	"1254"	"40"	"37.000"	"30.000"	"0.0066415208568616"	"17"	"0"	"3.551E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLDLENNWMLVEK"	"[K].hLDLENNWMLVEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"700.38318"	"2099.13498"	"2099.13597"	"-0.47"	"-0.00033"	"11/128"	"11"	"128"	"4416779.38763428"	"HCD"	"MS2"	"21.89241"	"134.8"	"100.000"	"59.7379"	"18846"	"18846"	"18821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.3"	""	"193.5"	""	"194.1"	""	"170.5"	""	"248.1"	"257.5"	""	"1249"	"40"	"37.000"	"30.000"	"0.00600526867850599"	"16"	"0"	"8.397E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVIPMNPNTDDLFK"	"[R].hVIPMNPNTDDLFk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"700.38409"	"2099.13773"	"2099.13597"	"0.84"	"0.00059"	"12/124"	"12"	"124"	"8630157.63140869"	"HCD"	"MS2"	"29.91203"	"240.9"	"79.292"	"49.2235"	"14577"	"14577"	"14558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"339.0"	""	"328.2"	""	"318.7"	""	"367.4"	""	"457.1"	"477.6"	""	"1255"	"34"	"37.000"	"30.000"	"0.0263398762454357"	"16"	"0"	"7.133E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLDLENNWMLVEK"	"[K].hLDLENNWMLVEk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"700.38495"	"2099.14029"	"2099.13597"	"2.06"	"0.00144"	"12/128"	"12"	"128"	"4618921.64520264"	"HCD"	"MS2"	"10.86739"	"145.6"	"100.000"	"59.6367"	"18751"	"18751"	"18729"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"235.0"	""	"208.2"	""	"222.9"	""	"194.1"	"1.4"	"254.7"	"261.6"	""	"1220"	"43"	"37.000"	"30.000"	"0.00305724212512636"	"24"	"0"	"3.141E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSGELHLVHWNSAK"	"[K].ySGELHLVHWNSAk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.54102"	"2099.14223"	"2099.14383"	"-0.76"	"-0.00040"	"14/130"	"14"	"130"	"47625764.5361328"	"HCD"	"MS2"	"10.04716"	"253.4"	"26.453"	"39.3044"	"10492"	"10492"	"10470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"371.8"	""	"302.7"	""	"339.7"	""	"502.0"	"2.0"	"433.6"	"446.8"	""	"1223"	"35"	"37.000"	"30.000"	"0.0187239063970185"	"15"	"0"	"2.641E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSGELHLVHWNSAK"	"[K].ySGELHLVHWNSAk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"4"	"4"	"0.8974"	"0.0000"	"1"	"1"	"1"	"525.54163"	"2099.14467"	"2099.14383"	"0.40"	"0.00021"	"15/130"	"15"	"130"	"42265499.3171387"	"HCD"	"MS2"	"9.959885"	"352.8"	"41.158"	"39.4274"	"10586"	"10586"	"10558"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"507.6"	""	"420.2"	""	"448.1"	""	"677.0"	"1.5"	"644.1"	"644.2"	""	"1210"	"39"	"37.000"	"30.000"	"0.00772245479330863"	"19"	"0"	"3.696E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEFFSQGCAPGYK"	"[K].fDEFFSQGcAPGYk.[K]"	"N-Term(TMT6plex); C9(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1050.50061"	"2099.99394"	"2099.99709"	"-1.50"	"-0.00157"	"16/126"	"16"	"126"	"621112.45135498"	"HCD"	"MS2"	"0"	"59.3"	"100.000"	"74.6838"	"24939"	"24939"	"24911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"125.1"	""	"122.6"	""	"104.7"	""	"54.0"	"2.5"	"68.4"	"81.2"	""	"662"	"54"	"35.000"	"28.000"	"0.000133914620151854"	"16"	"0"	"3.185E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEFFSQGCAPGYK"	"[K].fDEFFSQGcAPGYk.[K]"	"N-Term(TMT6plex); C9(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.66998"	"2099.99540"	"2099.99709"	"-0.81"	"-0.00056"	"13/126"	"13"	"126"	"7987943.2845459"	"HCD"	"MS2"	"13.20253"	"220.9"	"100.000"	"74.6629"	"24930"	"24930"	"24911"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"435.6"	""	"432.1"	""	"411.4"	""	"252.9"	""	"259.7"	"289.6"	""	"671"	"33"	"35.000"	"28.000"	"0.0180589512034215"	"15"	"0"	"1.901E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEFFSQGCAPGYK"	"[K].fDEFFSQGcAPGYk.[K]"	"N-Term(TMT6plex); C9(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1050.50159"	"2099.99590"	"2099.99709"	"-0.57"	"-0.00060"	"9/126"	"9"	"126"	"172452.42175293"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"74.9928"	"25065"	"25065"	"25039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.6"	""	"30.1"	""	"33.8"	""	"17.9"	""	"20.1"	"26.0"	""	"676"	"18"	"35.000"	"28.000"	"0.601058440593156"	"14"	"0.0006037"	"0.003774"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEFFSQGCAPGYK"	"[K].fDEFFSQGcAPGYk.[K]"	"N-Term(TMT6plex); C9(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1050.50183"	"2099.99639"	"2099.99709"	"-0.34"	"-0.00035"	"10/126"	"10"	"126"	"564218.688598633"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"74.6978"	"24893"	"24893"	"24865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.4"	""	"100.1"	""	"93.7"	""	"48.0"	"0.1"	"64.3"	"64.0"	""	"681"	"63"	"35.000"	"28.000"	"1.91036835839056E-05"	"16"	"0"	"1.149E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEFFSQGCAPGYK"	"[K].fDEFFSQGcAPGYk.[K]"	"N-Term(TMT6plex); C9(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.75458"	"2099.99648"	"2099.99709"	"-0.29"	"-0.00015"	"13/126"	"13"	"126"	"1061568.96832275"	"HCD"	"MS2"	"23.32045"	"24.8"	"100.000"	"74.8040"	"24936"	"24936"	"24913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.5"	""	"44.8"	""	"44.7"	""	"28.8"	"1.7"	"33.5"	"44.8"	""	"680"	"49"	"35.000"	"28.000"	"0.000443076704673782"	"16"	"0"	"9.232E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEFFSQGCAPGYK"	"[K].fDEFFSQGcAPGYk.[K]"	"N-Term(TMT6plex); C9(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.67041"	"2099.99668"	"2099.99709"	"-0.20"	"-0.00014"	"14/126"	"14"	"126"	"3057469.85308838"	"HCD"	"MS2"	"0.9003717"	"92.8"	"100.000"	"74.9765"	"25058"	"25058"	"25039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.5"	""	"174.5"	""	"177.3"	""	"101.3"	""	"131.6"	"132.5"	""	"680"	"31"	"35.000"	"28.000"	"0.0249160341267227"	"14"	"0"	"2.826E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEFFSQGCAPGYK"	"[K].fDEFFSQGcAPGYk.[K]"	"N-Term(TMT6plex); C9(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.67059"	"2099.99723"	"2099.99709"	"0.06"	"0.00005"	"10/126"	"10"	"126"	"4408340.47357178"	"HCD"	"MS2"	"5.073348"	"119.8"	"100.000"	"74.9448"	"24994"	"24994"	"24977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"232.3"	""	"232.2"	""	"232.6"	""	"121.5"	"1.8"	"152.9"	"154.4"	""	"682"	"51"	"35.000"	"28.000"	"0.000282979111722418"	"16"	"0"	"1.527E-05"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEFFSQGCAPGYK"	"[K].fDEFFSQGcAPGYk.[K]"	"N-Term(TMT6plex); C9(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1050.50232"	"2099.99736"	"2099.99709"	"0.13"	"0.00014"	"10/126"	"10"	"126"	"186495.82043457"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"74.9935"	"25013"	"25013"	"24993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.0"	""	"34.3"	""	"36.1"	""	"15.9"	""	"19.1"	"26.4"	""	"682"	"37"	"35.000"	"28.000"	"0.00747746482954502"	"15"	"0.0001889"	"0.0008992"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEFFSQGCAPGYK"	"[K].fDEFFSQGcAPGYk.[K]"	"N-Term(TMT6plex); C9(Methylthio); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.67065"	"2099.99741"	"2099.99709"	"0.15"	"0.00011"	"13/126"	"13"	"126"	"4817439.32592773"	"HCD"	"MS2"	"22.36496"	"133.5"	"100.000"	"74.6405"	"24869"	"24869"	"24849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"262.4"	""	"260.7"	""	"226.1"	""	"152.4"	""	"157.6"	"200.1"	""	"682"	"49"	"35.000"	"28.000"	"0.000416633684116221"	"16"	"0"	"9.85E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMYDGPVFDLTTTPK"	"[R].gMYDGPVFDLTTTPk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.70807"	"2100.10965"	"2100.10875"	"0.43"	"0.00030"	"15/130"	"15"	"130"	"4070688.74853516"	"HCD"	"MS2"	"6.818699"	"134.4"	"100.000"	"63.8350"	"20466"	"20466"	"20441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"170.8"	""	"169.5"	""	"163.1"	""	"153.2"	"10.3"	"277.5"	"332.8"	""	"1251"	"31"	"37.000"	"30.000"	"0.0553639813949187"	"14"	"0"	"7.972E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMYDGPVFDLTTTPK"	"[R].gMYDGPVFDLTTTPk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"700.70807"	"2100.10965"	"2100.10875"	"0.43"	"0.00030"	"11/130"	"11"	"130"	"3561365.54455566"	"HCD"	"MS2"	"20.56121"	"112.8"	"100.000"	"63.9115"	"20550"	"20550"	"20531"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"163.8"	""	"151.6"	""	"151.1"	""	"148.0"	"13.0"	"202.5"	"239.7"	""	"1251"	"60"	"37.000"	"30.000"	"6.26941926417726E-05"	"26"	"0"	"2.896E-06"	"1.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKPNLGNGADLPNYR"	"[K].lkPNLGNGADLPNYR.[W]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.73724"	"2100.19718"	"2100.19659"	"0.28"	"0.00019"	"13/138"	"13"	"138"	"2667697.64587402"	"HCD"	"MS2"	"14.32981"	"146.2"	"100.000"	"40.7976"	"11101"	"11101"	"11077"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.1"	""	"183.4"	""	"232.0"	""	"242.6"	"4.4"	"244.1"	"248.2"	""	"915"	"37"	"36.000"	"29.000"	"0.00984897643636401"	"15"	"0"	"3.116E-06"	"1.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKPNLGNGADLPNYR"	"[K].lkPNLGNGADLPNYR.[W]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.73761"	"2100.19828"	"2100.19659"	"0.80"	"0.00056"	"11/138"	"11"	"138"	"2080251.94311523"	"HCD"	"MS2"	"3.810391"	"129.8"	"100.000"	"41.0337"	"11242"	"11242"	"11213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.6"	""	"165.2"	""	"188.4"	""	"216.6"	"3.0"	"219.5"	"244.2"	""	"906"	"25"	"36.000"	"29.000"	"0.157796803711314"	"14"	"0"	"4.343E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAGQMGIQLFETSAK"	"[K].fAGQmGIQLFETSAk.[E]"	"N-Term(TMT6plex); M5(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.38538"	"2102.14157"	"2102.13563"	"2.83"	"0.00198"	"13/138"	"13"	"138"	"1008483.16748047"	"HCD"	"MS2"	"22.57248"	"72.9"	"100.000"	"60.8301"	"19239"	"19239"	"19209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.4"	""	"99.1"	""	"109.6"	""	"119.8"	"1.1"	"127.2"	"139.5"	""	"1295"	"28"	"38.000"	"31.000"	"0.100285876074583"	"14"	"0"	"7.715E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPYSGSTISLFQAMK"	"[K].dPYSGSTISLFQAMk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"701.71118"	"2103.11899"	"2103.11965"	"-0.31"	"-0.00022"	"14/134"	"14"	"134"	"3036476.59643555"	"HCD"	"MS2"	"25.01444"	"92.7"	"100.000"	"69.9243"	"22944"	"22944"	"22928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.7"	""	"123.8"	""	"136.9"	""	"132.2"	"1.7"	"178.5"	"160.4"	""	"1366"	"17"	"38.000"	"31.000"	"1.21736469816705"	"15"	"0"	"4.91E-05"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVPGVWAAGEGVDVTTLR"	"[K].fVPGVWAAGEGVDVTTLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P35763"	"Perforin-1 OS=Rattus norvegicus OX=10116 GN=Prf1 PE=2 SV=1"	"P35763"	"Perforin-1 OS=Rattus norvegicus OX=10116 GN=Prf1 PE=2 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"701.71887"	"2103.14206"	"2103.14361"	"-0.73"	"-0.00051"	"8/148"	"8"	"148"	"643384.151489258"	"HCD"	"MS2"	"67.58955"	"30.9"	"100.000"	"74.3057"	"24733"	"24733"	"24705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.5"	""	"43.1"	""	"54.4"	""	"42.6"	""	"49.0"	"55.5"	""	"1329"	"23"	"38.000"	"31.000"	"0.369398378956183"	"17"	"0"	"0.0001271"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGPQLVQMFIGDGAK"	"[K].lAGPQLVQMFIGDGAk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.73895"	"2103.20230"	"2103.20365"	"-0.64"	"-0.00045"	"13/142"	"13"	"142"	"409195.49230957"	"HCD"	"MS2"	"4.130188"	"14.1"	"100.000"	"83.8984"	"28635"	"28635"	"28612"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.8"	""	"15.7"	""	"15.9"	""	"24.0"	""	"28.1"	"30.5"	""	"1004"	"16"	"37.000"	"30.000"	"1.34494249905915"	"13"	"0.0001859"	"0.0003603"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGPQLVQMFIGDGAK"	"[K].lAGPQLVQMFIGDGAk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"701.73907"	"2103.20267"	"2103.20365"	"-0.47"	"-0.00033"	"10/142"	"10"	"142"	"454958.046020508"	"HCD"	"MS2"	"30.60556"	"18.1"	"100.000"	"83.4786"	"28515"	"28515"	"28491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.7"	""	"25.4"	""	"25.9"	""	"29.6"	""	"30.7"	"32.7"	""	"1003"	"36"	"37.000"	"30.000"	"0.0136543470600107"	"17"	"0"	"0.0001326"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGPQLVQMFIGDGAK"	"[K].lAGPQLVQMFIGDGAk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"701.73914"	"2103.20285"	"2103.20365"	"-0.38"	"-0.00027"	"16/142"	"16"	"142"	"981965.570678711"	"HCD"	"MS2"	"2.642721"	"25.9"	"100.000"	"83.7690"	"28633"	"28633"	"28615"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.7"	""	"37.9"	""	"38.3"	""	"46.0"	"2.2"	"41.9"	"40.7"	""	"994"	"23"	"36.000"	"29.000"	"0.255479694836466"	"15"	"0"	"0.000102"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGPQLVQMFIGDGAK"	"[K].lAGPQLVQMFIGDGAk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"701.73926"	"2103.20322"	"2103.20365"	"-0.21"	"-0.00014"	"16/142"	"16"	"142"	"777060.67956543"	"HCD"	"MS2"	"26.83471"	"24.9"	"100.000"	"83.5530"	"28494"	"28494"	"28476"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.5"	""	"32.4"	""	"37.9"	""	"33.7"	""	"42.8"	"41.1"	""	"996"	"33"	"36.000"	"29.000"	"0.0248444474755086"	"24"	"0"	"3.488E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYTLVTYVPVTTFK"	"[K].lYTLVTYVPVTTFk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.75470"	"2103.24955"	"2103.25059"	"-0.49"	"-0.00035"	"12/122"	"12"	"122"	"579702.40032959"	"HCD"	"MS2"	"30.67471"	"16.4"	"100.000"	"84.1743"	"28799"	"28799"	"28769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.3"	""	"29.5"	""	"28.4"	""	"30.5"	""	"23.8"	"25.8"	""	"623"	"49"	"34.000"	"27.000"	"0.000377970626919841"	"16"	"0"	"4.533E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYTLVTYVPVTTFK"	"[K].lYTLVTYVPVTTFk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.75470"	"2103.24955"	"2103.25059"	"-0.49"	"-0.00035"	"12/122"	"12"	"122"	"538718.15612793"	"HCD"	"MS2"	"35.06895"	"18.6"	"100.000"	"84.1104"	"28722"	"28722"	"28692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.3"	""	"30.0"	""	"37.3"	""	"30.4"	""	"28.7"	"26.9"	""	"623"	"46"	"34.000"	"27.000"	"0.00079883677737527"	"15"	"0"	"3.591E-05"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QNILYHLGEDWQK"	"[K].qNILYHLGEDWqk.[L]"	"N-Term(TMT6plex); Q1(Deamidated); Q12(Deamidated); K13(TMT6plex)"	"1"	"1"	"Q4V8C2"	"Centromere/kinetochore protein zw10 homolog OS=Rattus norvegicus OX=10116 GN=Zw10 PE=2 SV=3"	"Q4V8C2"	"Centromere/kinetochore protein zw10 homolog OS=Rattus norvegicus OX=10116 GN=Zw10 PE=2 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"2"	"4"	"702.03961"	"2104.10428"	"2104.11153"	"-3.44"	"-0.00241"	"3/122"	"3"	"122"	"392109.932373047"	"HCD"	"MS2"	"11.72731"	"11.9"	"100.000"	"80.9525"	"27485"	"27485"	"27454"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.6"	""	"14.0"	""	"18.9"	""	"20.3"	""	"24.1"	"22.8"	""	"1358"	"1"	"38.000"	"31.000"	"49.302594509847"	"14"	"0.004071"	"0.1053"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QNILYHLGEDWQK"	"[K].qNILYHLGEDWqk.[L]"	"N-Term(TMT6plex); Q1(Deamidated); Q12(Deamidated); K13(TMT6plex)"	"1"	"1"	"Q4V8C2"	"Centromere/kinetochore protein zw10 homolog OS=Rattus norvegicus OX=10116 GN=Zw10 PE=2 SV=3"	"Q4V8C2"	"Centromere/kinetochore protein zw10 homolog OS=Rattus norvegicus OX=10116 GN=Zw10 PE=2 SV=3"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"2"	"4"	"702.03973"	"2104.10465"	"2104.11153"	"-3.27"	"-0.00229"	"6/122"	"6"	"122"	"408099.235412598"	"HCD"	"MS2"	"16.12234"	"10.8"	"100.000"	"80.9577"	"27436"	"27436"	"27408"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.8"	""	"15.7"	""	"18.1"	""	"17.1"	""	"18.8"	"22.4"	""	"1358"	"9"	"38.000"	"31.000"	"7.77803287241518"	"17"	"0.007254"	"0.2703"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFINNEWHDSVSGK"	"[K].iFINNEWHDSVSGk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"702.04547"	"2104.12186"	"2104.12276"	"-0.43"	"-0.00030"	"15/136"	"15"	"136"	"18284447.8005981"	"HCD"	"MS2"	"13.46921"	"669.1"	"100.000"	"47.2556"	"13724"	"13724"	"13704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1067.4"	""	"971.7"	""	"1063.1"	""	"985.5"	"10.6"	"1052.6"	"1175.0"	""	"1386"	"57"	"38.000"	"31.000"	"0.000128154315295181"	"19"	"0"	"1.469E-06"	"1.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFINNEWHDSVSGK"	"[K].iFINNEWHDSVSGk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"702.04578"	"2104.12278"	"2104.12276"	"0.01"	"0.00001"	"14/136"	"14"	"136"	"14124533.4093018"	"HCD"	"MS2"	"32.56585"	"506.0"	"100.000"	"47.5303"	"13885"	"13885"	"13858"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"789.2"	""	"732.9"	""	"805.6"	""	"747.8"	"4.3"	"811.6"	"893.2"	""	"1386"	"52"	"38.000"	"31.000"	"0.000405259528312125"	"18"	"0"	"1.799E-06"	"1.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFINNEWHDSVSGK"	"[K].iFINNEWHDSVSGk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"702.04645"	"2104.12479"	"2104.12276"	"0.96"	"0.00068"	"16/136"	"16"	"136"	"8743080.02966309"	"HCD"	"MS2"	"10.12824"	"399.9"	"100.000"	"47.8226"	"14004"	"14004"	"13986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"529.7"	""	"558.6"	""	"613.7"	""	"646.8"	""	"709.8"	"729.5"	""	"1372"	"48"	"38.000"	"31.000"	"0.00116499514558875"	"21"	"0"	"8.819E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRPTSTNPIASIFAWTR"	"[K].gRPTSTNPIASIFAWTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"702.05426"	"2104.14823"	"2104.15009"	"-0.88"	"-0.00062"	"9/182"	"9"	"182"	"5999496.13708496"	"HCD"	"MS2"	"35.84379"	"218.1"	"100.000"	"64.5385"	"20806"	"20806"	"20787"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"329.1"	""	"307.8"	""	"316.6"	""	"374.9"	"1.1"	"361.9"	"372.4"	""	"1369"	"8"	"38.000"	"31.000"	"11.8952466727895"	"13"	"0"	"5.271E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRPTSTNPIASIFAWTR"	"[K].gRPTSTNPIASIFAWTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.05432"	"2104.14841"	"2104.15009"	"-0.80"	"-0.00056"	"13/182"	"13"	"182"	"4642903.97009277"	"HCD"	"MS2"	"5.735827"	"84.7"	"100.000"	"64.2320"	"20681"	"20681"	"20659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.2"	""	"123.9"	""	"130.2"	""	"123.0"	"1.8"	"138.9"	"142.9"	""	"1371"	"47"	"38.000"	"31.000"	"0.00141256180554658"	"15"	"0"	"2.333E-06"	"1.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRPTSTNPIASIFAWTR"	"[K].gRPTSTNPIASIFAWTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.05499"	"2104.15042"	"2104.15009"	"0.16"	"0.00011"	"13/182"	"13"	"182"	"4385680.11425781"	"HCD"	"MS2"	"4.351843"	"80.5"	"100.000"	"64.2199"	"20623"	"20623"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.8"	""	"122.8"	""	"115.8"	""	"129.3"	""	"137.2"	"141.5"	""	"1358"	"49"	"38.000"	"31.000"	"0.000864708592010312"	"16"	"0"	"3.977E-07"	"1.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINEPTAAALAYGLDK"	"[R].vINEPTAAALAYGLDk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.07251"	"2104.20298"	"2104.20543"	"-1.16"	"-0.00082"	"12/168"	"12"	"168"	"2275943.34771729"	"HCD"	"MS2"	"5.376638"	"95.7"	"100.000"	"66.1524"	"21465"	"21465"	"21443"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.6"	""	"145.0"	""	"137.6"	""	"165.5"	""	"160.7"	"163.7"	""	"969"	"23"	"36.000"	"29.000"	"0.265640189504154"	"14"	"0"	"0.0001635"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFYPEEISSMVLTK"	"[R].sFYPEEISSmVLTk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"702.37823"	"2105.12015"	"2105.12407"	"-1.86"	"-0.00130"	"13/128"	"13"	"128"	"1903773.36645508"	"HCD"	"MS2"	"24.6447"	"77.5"	"100.000"	"62.7013"	"20003"	"20003"	"19977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.7"	""	"105.5"	""	"104.6"	""	"130.9"	""	"148.4"	"145.9"	""	"1360"	"23"	"38.000"	"31.000"	"0.343169682343199"	"22"	"0.0001308"	"0.0002563"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPPLWENLDLVPAGDR"	"[R].aLPPLWENLDLVPAGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HG6"	"Carbonic anhydrase 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ca5b PE=2 SV=1"	"Q66HG6"	"Carbonic anhydrase 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ca5b PE=2 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"702.39014"	"2105.15586"	"2105.15926"	"-1.61"	"-0.00113"	"11/164"	"11"	"164"	"552789.180847168"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"83.1020"	"28310"	"28310"	"28288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"13.3"	""	"9.4"	""	"17.4"	""	"15.6"	"17.1"	""	"1300"	"45"	"38.000"	"31.000"	"0.00184889971984115"	"21"	"0"	"0.0001482"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHTEALTALLSDDSK"	"[K].fHTEALTALLSDDSk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"702.72107"	"2106.14865"	"2106.14831"	"0.17"	"0.00012"	"12/134"	"12"	"134"	"4221691.84606934"	"HCD"	"MS2"	"36.27551"	"142.3"	"100.000"	"60.8601"	"19251"	"19251"	"19225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.8"	""	"184.3"	""	"190.1"	""	"245.8"	"1.5"	"274.6"	"247.1"	""	"1258"	"29"	"37.000"	"30.000"	"0.0725522099169468"	"16"	"0"	"1.514E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHTEALTALLSDDSK"	"[K].fHTEALTALLSDDSk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"Q5U2Q7"	"Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus OX=10116 GN=Etf1 PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.72156"	"2106.15012"	"2106.14831"	"0.86"	"0.00060"	"13/134"	"13"	"134"	"3916509.54431152"	"HCD"	"MS2"	"33.39394"	"123.2"	"100.000"	"60.9844"	"19355"	"19355"	"19331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.3"	""	"155.1"	""	"163.2"	""	"208.2"	"0.2"	"247.2"	"224.0"	""	"1245"	"26"	"37.000"	"30.000"	"0.146939770015491"	"14"	"0"	"1.372E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGSVQTLGPANLPLTQR"	"[R].iIGSVQTLGPANLPLTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7733"	"0.0000"	"1"	"1"	"1"	"1054.12476"	"2107.24224"	"2107.24365"	"-0.67"	"-0.00071"	"15/184"	"15"	"184"	"520624.917419434"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"65.7348"	"21295"	"21295"	"21267"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.7"	""	"31.9"	""	"21.3"	""	"34.9"	"1.0"	"42.8"	"50.4"	""	"581"	"75"	"34.000"	"27.000"	"8.85413494486931E-07"	""	"0"	"1.347E-06"	"1.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGSVQTLGPANLPLTQR"	"[R].iIGSVQTLGPANLPLTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"1054.12488"	"2107.24248"	"2107.24365"	"-0.56"	"-0.00059"	"10/184"	"10"	"184"	"428519.233398438"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"65.8007"	"21269"	"21269"	"21241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.8"	""	"21.5"	""	"25.5"	""	"37.5"	""	"31.2"	"52.0"	""	"579"	"85"	"34.000"	"27.000"	"8.74276023056383E-08"	""	"0"	"1.169E-06"	"1.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGSVQTLGPANLPLTQR"	"[R].iIGSVQTLGPANLPLTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.08600"	"2107.24344"	"2107.24365"	"-0.10"	"-0.00007"	"20/184"	"20"	"184"	"7349558.96777344"	"HCD"	"MS2"	"2.48602"	"53.2"	"100.000"	"65.7064"	"21230"	"21230"	"21209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.8"	""	"69.1"	""	"70.4"	""	"86.3"	""	"105.7"	"110.9"	""	"571"	"56"	"34.000"	"27.000"	"7.75543411253559E-05"	"16"	"0"	"4.283E-06"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGSVQTLGPANLPLTQR"	"[R].iIGSVQTLGPANLPLTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.9818"	"0.0000"	"1"	"1"	"1"	"703.08606"	"2107.24363"	"2107.24365"	"-0.01"	"-0.00001"	"21/184"	"21"	"184"	"7033012.52593994"	"HCD"	"MS2"	"0"	"52.7"	"89.204"	"66.0122"	"21355"	"21355"	"21337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.2"	""	"71.9"	""	"59.3"	""	"87.9"	""	"94.5"	"113.5"	""	"567"	"55"	"34.000"	"27.000"	"8.88286502843469E-05"	"17"	"0"	"2.078E-06"	"1.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGSVQTLGPANLPLTQR"	"[R].iIGSVQTLGPANLPLTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.08606"	"2107.24363"	"2107.24365"	"-0.01"	"-0.00001"	"21/184"	"21"	"184"	"11175616.3755493"	"HCD"	"MS2"	"0"	"65.8"	"97.123"	"65.6358"	"21254"	"21254"	"21235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.3"	""	"84.1"	""	"82.5"	""	"116.5"	""	"135.1"	"141.6"	""	"567"	"52"	"34.000"	"27.000"	"0.000161269805894229"	"16"	"0"	"1.673E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGSVQTLGPANLPLTQR"	"[R].iIGSVQTLGPANLPLTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"703.08624"	"2107.24417"	"2107.24365"	"0.25"	"0.00017"	"19/184"	"19"	"184"	"5020065.82263184"	"HCD"	"MS2"	"0.4595886"	"54.4"	"100.000"	"65.9465"	"21381"	"21381"	"21363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.0"	""	"82.4"	""	"82.9"	""	"82.1"	""	"87.4"	"111.5"	""	"562"	"53"	"34.000"	"27.000"	"0.000127557594278707"	"19"	"0"	"2.388E-06"	"1.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSGVNGPLVILDHVK"	"[K].tVSGVnGPLVILDHVk.[F]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.08820"	"2107.25003"	"2107.25271"	"-1.27"	"-0.00089"	"17/164"	"17"	"164"	"2550630.85491943"	"HCD"	"MS2"	"34.38857"	"84.8"	"100.000"	"62.3946"	"19878"	"19878"	"19849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.1"	""	"107.7"	""	"117.0"	""	"137.8"	""	"152.5"	"167.7"	""	"515"	"30"	"34.000"	"27.000"	"0.0258093598805059"	"14"	"0"	"3.982E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSGVNGPLVILDHVK"	"[K].tVSGVnGPLVILDHVk.[F]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.08862"	"2107.25132"	"2107.25271"	"-0.66"	"-0.00047"	"19/164"	"19"	"164"	"2890815.4175415"	"HCD"	"MS2"	"53.99848"	"87.8"	"100.000"	"62.4761"	"19964"	"19964"	"19939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.4"	""	"119.4"	""	"135.4"	""	"135.7"	""	"157.1"	"152.1"	""	"509"	"36"	"34.000"	"27.000"	"0.00694524845724646"	"15"	"0"	"1.929E-06"	"1.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSGVNGPLVILDHVK"	"[K].tVSGVnGPLVILDHVk.[F]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.08881"	"2107.25187"	"2107.25271"	"-0.40"	"-0.00028"	"12/164"	"12"	"164"	"1659657.2701416"	"HCD"	"MS2"	"20.38251"	"74.9"	"100.000"	"62.7943"	"20094"	"20094"	"20067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.2"	""	"98.8"	""	"100.4"	""	"125.3"	""	"137.3"	"141.9"	""	"507"	"30"	"34.000"	"27.000"	"0.0254084377852748"	"14"	"0"	"6.822E-06"	"1.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFQPTEMASQDFFQR"	"[K].fFQPTEMASQDFFQR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.34094"	"2108.00827"	"2108.01088"	"-1.23"	"-0.00087"	"16/148"	"16"	"148"	"2859010.92193604"	"HCD"	"MS2"	"22.18565"	"63.5"	"100.000"	"71.4069"	"23601"	"23601"	"23578"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.2"	""	"81.7"	""	"82.5"	""	"123.7"	"1.3"	"111.0"	"114.1"	""	"758"	"18"	"35.000"	"28.000"	"0.630433394490295"	"14"	"0.0001889"	"0.0005636"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFQPTEMASQDFFQR"	"[K].fFQPTEMASQDFFQR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.34149"	"2108.00992"	"2108.01088"	"-0.45"	"-0.00032"	"15/148"	"15"	"148"	"3053106.80059814"	"HCD"	"MS2"	"48.47178"	"73.4"	"100.000"	"71.5052"	"23589"	"23589"	"23571"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.3"	""	"81.1"	""	"93.7"	""	"138.1"	""	"134.0"	"150.8"	""	"786"	"16"	"35.000"	"28.000"	"1.02894592223006"	"13"	"0.0001889"	"0.0005716"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFGFSHLEALLDDSK"	"[R].aFGFSHLEALLDDSk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"703.38513"	"2108.14084"	"2108.14283"	"-0.94"	"-0.00066"	"12/130"	"12"	"130"	"3546037.18151855"	"HCD"	"MS2"	"24.8031"	"94.4"	"100.000"	"71.6251"	"23638"	"23638"	"23619"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.3"	""	"109.8"	""	"117.0"	""	"187.8"	"0.7"	"174.5"	"174.6"	""	"1271"	"49"	"38.000"	"31.000"	"0.00079453961370336"	"18"	"0"	"2.25E-06"	"1.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFGFSHLEALLDDSK"	"[R].aFGFSHLEALLDDSk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"703.38531"	"2108.14139"	"2108.14283"	"-0.68"	"-0.00048"	"9/130"	"9"	"130"	"3592326.73822021"	"HCD"	"MS2"	"20.81015"	"95.5"	"100.000"	"71.5150"	"23645"	"23645"	"23626"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.4"	""	"120.2"	""	"134.3"	""	"174.7"	""	"166.7"	"194.8"	""	"1271"	"42"	"38.000"	"31.000"	"0.00446802459286176"	"17"	"0"	"1.009E-05"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGSVQTLGPANLPLTQR"	"[R].iIGSVqTLGPANLPLTQR.[L]"	"N-Term(TMT6plex); Q6(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.42078"	"2108.24778"	"2108.22767"	"9.54"	"0.00670"	"6/184"	"6"	"184"	"907959.673522949"	"HCD"	"MS2"	"49.32194"	"35.8"	"100.000"	"68.5460"	"22433"	"22433"	"22410"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.9"	""	"45.6"	""	"49.3"	""	"60.4"	"0.7"	"65.4"	"64.2"	""	"526"	"1"	"34.000"	"27.000"	"20.9872602751478"	"13"	"0.003197"	"0.06622"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITHLNNNFMFGQK"	"[R].aITHLNNNFmFGQk.[M]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.71521"	"2109.13108"	"2109.13155"	"-0.22"	"-0.00016"	"14/120"	"14"	"120"	"5762354.47851563"	"HCD"	"MS2"	"27.58099"	"226.5"	"100.000"	"41.8087"	"11559"	"11559"	"11538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.7"	""	"231.4"	""	"245.0"	""	"477.1"	"1.7"	"477.6"	"424.7"	""	"1214"	"25"	"37.000"	"30.000"	"0.190628877718286"	"14"	"7.476E-05"	"0.000203"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPTPAGVFIDIPISNIR"	"[R].vAPTPAGVFIDIPISNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"1055.11536"	"2109.22344"	"2109.22694"	"-1.66"	"-0.00175"	"7/162"	"7"	"162"	"186778.274658203"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"78.1377"	"26286"	"26286"	"26257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.6"	""	"10.9"	""	"9.1"	""	"9.5"	""	"13.9"	"13.7"	""	"691"	"9"	"35.000"	"28.000"	"4.13473853566653"	"14"	"0.002132"	"0.03208"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPTPAGVFIDIPISNIR"	"[R].vAPTPAGVFIDIPISNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"1055.11548"	"2109.22368"	"2109.22694"	"-1.55"	"-0.00163"	"6/162"	"6"	"162"	"165470.32434082"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"78.1162"	"26328"	"26328"	"26303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"8.6"	""	"7.9"	""	"14.0"	""	"10.3"	"12.4"	""	"689"	"38"	"35.000"	"28.000"	"0.0060560468500877"	"21"	"0.0003146"	"0.001425"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGVPFLGSVPLDPQLTR"	"[R].lAGVPFLGSVPLDPQLTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS1"	"Cytosolic Fe-S cluster assembly factor NUBP2 OS=Rattus norvegicus OX=10116 GN=Nubp2 PE=1 SV=1"	"Q68FS1"	"Cytosolic Fe-S cluster assembly factor NUBP2 OS=Rattus norvegicus OX=10116 GN=Nubp2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"1055.11572"	"2109.22417"	"2109.22694"	"-1.31"	"-0.00139"	"4/158"	"4"	"158"	"102994.729736328"	"HCD"	"MS2"	"19.41354"	"2.2"	"100.000"	"84.7275"	"29024"	"29024"	"29000"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	"3.3"	""	"6.3"	""	"6.9"	"4.4"	""	"678"	"16"	"35.000"	"28.000"	"0.771258029031732"	"16"	"0.001587"	"0.02119"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGVPFLGSVPLDPQLTR"	"[R].lAGVPFLGSVPLDPQLTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS1"	"Cytosolic Fe-S cluster assembly factor NUBP2 OS=Rattus norvegicus OX=10116 GN=Nubp2 PE=1 SV=1"	"Q68FS1"	"Cytosolic Fe-S cluster assembly factor NUBP2 OS=Rattus norvegicus OX=10116 GN=Nubp2 PE=1 SV=1"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"703.74640"	"2109.22464"	"2109.22694"	"-1.09"	"-0.00077"	"16/158"	"16"	"158"	"943902.765930176"	"HCD"	"MS2"	"32.8259"	"8.4"	"100.000"	"84.6705"	"28950"	"28950"	"28923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.5"	""	"10.6"	""	"9.5"	""	"14.2"	""	"18.8"	"15.9"	""	"680"	"44"	"35.000"	"28.000"	"0.00120914648313455"	"16"	"0"	"5.324E-06"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGVPFLGSVPLDPQLTR"	"[R].lAGVPFLGSVPLDPQLTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS1"	"Cytosolic Fe-S cluster assembly factor NUBP2 OS=Rattus norvegicus OX=10116 GN=Nubp2 PE=1 SV=1"	"Q68FS1"	"Cytosolic Fe-S cluster assembly factor NUBP2 OS=Rattus norvegicus OX=10116 GN=Nubp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1055.11633"	"2109.22539"	"2109.22694"	"-0.74"	"-0.00078"	"3/158"	"3"	"158"	"73759.6196899414"	"HCD"	"MS2"	"0"	"1.1"	"100.000"	"84.7929"	"29000"	"29000"	"28971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"2.1"	""	"2.1"	""	"3.6"	"2.6"	""	"673"	"1"	"35.000"	"28.000"	"29.0392281323586"	"13"	"0.001217"	"0.01762"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPTPAGVFIDIPISNIR"	"[R].vAPTPAGVFIDIPISNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"0.9437"	"0.0000"	"1"	"1"	"1"	"703.74719"	"2109.22702"	"2109.22694"	"0.04"	"0.00003"	"16/162"	"16"	"162"	"2315988.08734131"	"HCD"	"MS2"	"3.887602"	"20.1"	"100.000"	"78.2918"	"26400"	"26400"	"26383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.4"	""	"29.8"	""	"22.8"	""	"28.6"	""	"38.7"	"36.7"	""	"651"	"71"	"35.000"	"28.000"	"2.62150682610296E-06"	"21"	"0"	"1.641E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPTPAGVFIDIPISNIR"	"[R].vAPTPAGVFIDIPISNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.74768"	"2109.22849"	"2109.22694"	"0.73"	"0.00052"	"16/162"	"16"	"162"	"1453514.01153564"	"HCD"	"MS2"	"9.672389"	"16.0"	"100.000"	"78.3825"	"26386"	"26386"	"26369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.3"	""	"25.1"	""	"22.8"	""	"23.2"	""	"24.9"	"30.0"	""	"645"	"64"	"35.000"	"28.000"	"1.31986562762928E-05"	"17"	"0"	"1.077E-05"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPTPAGVFIDIPISNIR"	"[R].vAPTPAGVFIDIPISNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.74786"	"2109.22904"	"2109.22694"	"0.99"	"0.00070"	"16/162"	"16"	"162"	"2083281.30755615"	"HCD"	"MS2"	"4.175818"	"18.0"	"100.000"	"78.0733"	"26259"	"26259"	"26241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.6"	""	"22.2"	""	"21.3"	""	"29.1"	"0.8"	"37.6"	"34.3"	""	"635"	"46"	"35.000"	"28.000"	"0.000729027195775675"	"15"	"0"	"1.693E-05"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPTPAGVFIDIPISNIR"	"[R].vAPTPAGVFIDIPISNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"3"	"3"	"0.9855"	"0.0000"	"1"	"1"	"1"	"703.74799"	"2109.22940"	"2109.22694"	"1.17"	"0.00082"	"16/162"	"16"	"162"	"1692169.70635986"	"HCD"	"MS2"	"8.590588"	"14.8"	"100.000"	"77.9965"	"26279"	"26279"	"26257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.8"	""	"17.8"	""	"21.0"	""	"19.8"	"1.1"	"23.7"	"33.6"	""	"633"	"69"	"35.000"	"28.000"	"4.29906205844834E-06"	"18"	"0"	"1.212E-05"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].LNDGNLMPVLGFGTFASk.[E]"	"K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"704.04425"	"2110.11820"	"2110.12043"	"-1.06"	"-0.00074"	"12/196"	"12"	"196"	"1179262.78753662"	"HCD"	"MS2"	"35.26266"	"41.5"	"100.000"	"77.7644"	"26184"	"26184"	"26165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.6"	""	"77.7"	""	"68.0"	""	"38.2"	""	"63.4"	"66.3"	""	"1193"	"13"	"37.000"	"30.000"	"2.95536038815057"	"14"	"0.0008125"	"0.007763"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].LNDGNLMPVLGFGTFASk.[E]"	"K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"704.04504"	"2110.12058"	"2110.12043"	"0.07"	"0.00005"	"12/196"	"12"	"196"	"1527607.38537598"	"HCD"	"MS2"	"80.14297"	"50.0"	"100.000"	"77.7843"	"26141"	"26141"	"26121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.2"	""	"84.1"	""	"71.2"	""	"54.7"	"0.2"	"80.2"	"78.3"	""	"1186"	"18"	"37.000"	"30.000"	"0.899610867903387"	"15"	"0.0003839"	"0.001849"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].LNDGNLMPVLGFGTFASk.[E]"	"K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"1055.56689"	"2110.12651"	"2110.12043"	"2.88"	"0.00304"	"8/196"	"8"	"196"	"234167.939575195"	"HCD"	"MS2"	"23.1321"	"14.6"	"100.000"	"77.6655"	"26144"	"26144"	"26117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.5"	""	"25.9"	""	"17.5"	""	"11.0"	"1.4"	"22.3"	"23.7"	""	"1197"	"50"	"37.000"	"30.000"	"0.000619532586757587"	"23"	"0.0002277"	"0.001226"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].LNDGNLMPVLGFGTFASk.[E]"	"K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"1055.56787"	"2110.12847"	"2110.12043"	"3.81"	"0.00402"	"10/196"	"10"	"196"	"267902.761535645"	"HCD"	"MS2"	"100"	"17.5"	"100.000"	"77.7150"	"26113"	"26113"	"26089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.2"	""	"28.9"	""	"25.8"	""	"15.4"	""	"32.3"	"27.5"	""	"1199"	"54"	"37.000"	"30.000"	"0.000220693319698698"	"18"	"0.0001308"	"0.0002681"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQPDMAIMAVNTFVK"	"[K].sQPDMAIMAVNTFVk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.05225"	"2110.14219"	"2110.14409"	"-0.90"	"-0.00063"	"13/160"	"13"	"160"	"2137974.4473877"	"HCD"	"MS2"	"3.979604"	"67.6"	"100.000"	"70.8532"	"23323"	"23323"	"23299"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.5"	""	"86.7"	""	"101.5"	""	"99.8"	""	"133.3"	"137.1"	""	"1142"	"26"	"37.000"	"30.000"	"0.152980511347167"	"14"	"0"	"0.0001608"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGLVDQLVDPLGPGIK"	"[K].mGLVDQLVDPLGPGIk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"528.31348"	"2110.23208"	"2110.23462"	"-1.20"	"-0.00064"	"14/148"	"14"	"148"	"667029.814758301"	"HCD"	"MS2"	"22.36791"	"15.1"	"100.000"	"81.6013"	"27749"	"27749"	"27726"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.7"	""	"21.4"	""	"19.6"	""	"22.5"	""	"28.1"	"33.4"	""	"615"	"48"	"34.000"	"27.000"	"0.000480667900112094"	"16"	"0"	"9.451E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGLVDQLVDPLGPGIK"	"[K].mGLVDQLVDPLGPGIk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"4"	"4"	"0.9512"	"0.0000"	"1"	"1"	"1"	"528.31384"	"2110.23354"	"2110.23462"	"-0.51"	"-0.00027"	"11/148"	"11"	"148"	"639819.709716797"	"HCD"	"MS2"	"35.92758"	"14.4"	"100.000"	"81.6223"	"27707"	"27707"	"27680"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.5"	""	"17.8"	""	"20.3"	""	"25.3"	""	"24.8"	"26.1"	""	"597"	"41"	"34.000"	"27.000"	"0.00232243910485381"	"17"	"0"	"2.499E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQPDMAIMAVNTFVK"	"[K].sqPDMAIMAVNTFVk.[D]"	"N-Term(TMT6plex); Q2(Deamidated); K15(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"3"	"3"	"0.3684"	"0.0000"	"1"	"1"	"1"	"704.37396"	"2111.10733"	"2111.12810"	"-9.84"	"-0.00692"	"12/160"	"12"	"160"	"2482093.06646729"	"HCD"	"MS2"	"10.67153"	"51.0"	"100.000"	"70.6212"	"23280"	"23280"	"23258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.3"	""	"62.2"	""	"59.9"	""	"86.9"	""	"107.5"	"102.0"	""	"1255"	"19"	"37.000"	"30.000"	"0.759650328802927"	"14"	"0.0006037"	"0.003772"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQPDMAIMAVNTFVK"	"[K].sQPDMAIMAVnTFVk.[D]"	"N-Term(TMT6plex); N11(Deamidated); K15(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"3"	"3"	"0.0769"	"0.0000"	"1"	"1"	"1"	"704.37463"	"2111.10935"	"2111.12810"	"-8.88"	"-0.00625"	"13/160"	"13"	"160"	"2597652.86773682"	"HCD"	"MS2"	"10.41646"	"55.6"	"100.000"	"70.7266"	"23271"	"23271"	"23251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.4"	""	"75.2"	""	"71.6"	""	"87.8"	""	"118.8"	"105.6"	""	"1261"	"13"	"37.000"	"31.000"	"2.96951204293279"	"13"	"0.0001889"	"0.0006332"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVILMDPFDDDLMK"	"[K].tVILMDPFDDDLMk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"704.37622"	"2111.11411"	"2111.11687"	"-1.31"	"-0.00092"	"13/124"	"13"	"124"	"1060410.86114502"	"HCD"	"MS2"	"15.18684"	"25.1"	"100.000"	"84.5753"	"28962"	"28962"	"28945"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.6"	""	"36.7"	""	"35.4"	""	"28.9"	"0.9"	"57.8"	"37.9"	""	"1261"	"26"	"37.000"	"31.000"	"0.144107004552821"	"18"	"0.0001889"	"0.0005949"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVILMDPFDDDLMK"	"[K].tVILMDPFDDDLMk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"704.37683"	"2111.11594"	"2111.11687"	"-0.44"	"-0.00031"	"12/124"	"12"	"124"	"689411.478637695"	"HCD"	"MS2"	"21.25344"	"20.9"	"100.000"	"84.6154"	"28927"	"28927"	"28907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.5"	""	"24.9"	""	"33.3"	""	"30.3"	""	"42.1"	"39.3"	""	"1271"	"29"	"38.000"	"31.000"	"0.0897667609607759"	"18"	"0"	"9.912E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVILMDPFDDDLMK"	"[K].tVILMDPFDDDLMk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"1056.06262"	"2111.11797"	"2111.11687"	"0.52"	"0.00055"	"6/124"	"6"	"124"	"92749.5788574219"	"HCD"	"MS2"	"14.75587"	"5.3"	"100.000"	"84.6237"	"28982"	"28982"	"28960"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.2"	""	"8.7"	""	"6.3"	""	"6.8"	""	"9.9"	"11.1"	""	"1269"	"24"	"38.000"	"31.000"	"0.245714975702766"	"16"	"0.0001889"	"0.000502"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVILMDPFDDDLMK"	"[K].tVILMDPFDDDLMk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1056.06311"	"2111.11894"	"2111.11687"	"0.98"	"0.00104"	"7/124"	"7"	"124"	"103319.738647461"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"84.5943"	"28919"	"28919"	"28892"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.5"	""	"8.3"	""	"10.6"	""	"5.0"	""	"7.9"	"6.8"	""	"1274"	"5"	"38.000"	"31.000"	"21.093052438441"	"13"	"0.0006037"	"0.005703"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYPER"	"[K].sTLINSLFLTDLYPER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9322"	"0.0000"	"1"	"1"	"1"	"704.38989"	"2111.15512"	"2111.15859"	"-1.64"	"-0.00115"	"14/170"	"14"	"170"	"861286.072937012"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"86.4614"	"29723"	"29723"	"29711"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.0"	""	"8.9"	""	"17.0"	""	"17.3"	""	"18.3"	"17.8"	""	"1153"	"59"	"37.000"	"30.000"	"7.77677101814088E-05"	"20"	"0"	"4.184E-06"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYPER"	"[K].sTLINSLFLTDLYPER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"704.39014"	"2111.15586"	"2111.15859"	"-1.29"	"-0.00091"	"14/170"	"14"	"170"	"726035.844055176"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"86.1660"	"29604"	"29604"	"29586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"10.3"	""	"9.7"	""	"10.3"	""	"13.8"	"14.2"	""	"1139"	"60"	"37.000"	"30.000"	"5.18195608764068E-05"	"21"	"0"	"4.893E-06"	"1.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYPER"	"[K].sTLINSLFLTDLYPER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9180"	"0.0000"	"1"	"1"	"1"	"704.39050"	"2111.15696"	"2111.15859"	"-0.77"	"-0.00054"	"14/170"	"14"	"170"	"636159.413208008"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"86.0807"	"29517"	"29517"	"29505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.1"	""	"8.8"	""	"13.6"	""	"10.3"	""	"15.8"	"14.4"	""	"1135"	"61"	"37.000"	"30.000"	"4.93135043619976E-05"	"21"	"0"	"3.857E-06"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYPER"	"[K].sTLINSLFLTDLYPER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1056.08228"	"2111.15727"	"2111.15859"	"-0.62"	"-0.00066"	"6/170"	"6"	"170"	"128621.792480469"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"86.2722"	"29647"	"29647"	"29622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.4"	""	"11.9"	""	"11.0"	""	"10.3"	""	"11.6"	"7.9"	""	"1135"	"26"	"37.000"	"30.000"	"0.146881082934938"	"14"	"7.476E-05"	"0.0002011"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYPER"	"[K].sTLINSLFLTDLYPER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.8085"	"0.0000"	"1"	"1"	"1"	"704.39087"	"2111.15805"	"2111.15859"	"-0.25"	"-0.00018"	"15/170"	"15"	"170"	"1211794.04956055"	"HCD"	"MS2"	"1.122193"	"11.4"	"100.000"	"86.3681"	"29633"	"29633"	"29617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.7"	""	"14.0"	"2.8"	"17.6"	""	"16.3"	""	"25.3"	"16.4"	""	"1132"	"47"	"37.000"	"30.000"	"0.00113714653193654"	"25"	"0"	"3.724E-06"	"1.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYPER"	"[K].sTLINSLFLTDLYPER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"1056.08301"	"2111.15874"	"2111.15859"	"0.07"	"0.00008"	"7/170"	"7"	"170"	"106628.866455078"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"86.1626"	"29550"	"29550"	"29526"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"8.0"	""	"9.0"	""	"8.0"	""	"8.6"	"6.9"	""	"1128"	"34"	"37.000"	"30.000"	"0.0226088828741799"	"16"	"0.0001308"	"0.00025"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYENQKPPFDAK"	"[K].sYENQkPPFDAk.[N]"	"N-Term(TMT6plex); K6(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.39716"	"2111.17691"	"2111.17402"	"1.37"	"0.00097"	"5/122"	"5"	"122"	"714422.783996582"	"HCD"	"MS2"	"0"	"61.6"	"100.000"	"35.5081"	"8934"	"8934"	"8907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.9"	""	"84.6"	""	"72.2"	""	"97.7"	"0.5"	"122.8"	"113.6"	""	"1023"	"16"	"37.000"	"30.000"	"1.32692274372377"	"14"	"0"	"0.0001372"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWISGFTGSAGTAVVTK"	"[R].aWISGFTGSAGTAVVTk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.9740"	"0.0000"	"1"	"1"	"1"	"704.40161"	"2111.19028"	"2111.19011"	"0.08"	"0.00006"	"12/152"	"12"	"152"	"3854049.34051514"	"HCD"	"MS2"	"42.0158"	"125.3"	"100.000"	"63.0984"	"20218"	"20218"	"20195"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.8"	""	"151.7"	""	"139.1"	""	"191.3"	"7.3"	"268.7"	"301.6"	""	"963"	"77"	"36.000"	"29.000"	"9.28103245701435E-07"	"19"	"0"	"4.193E-06"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKDFQLFGSPLGK"	"[K].skDFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"528.56683"	"2111.24550"	"2111.24679"	"-0.61"	"-0.00032"	"7/134"	"7"	"134"	"17992635.2153931"	"HCD"	"MS2"	"10.23098"	"386.4"	"100.000"	"55.6644"	"17187"	"17187"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"691.2"	""	"613.6"	""	"590.2"	""	"620.0"	""	"554.3"	"578.9"	""	"547"	"10"	"34.000"	"27.000"	"2.54658003940452"	"13"	"0"	"0.0001497"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKDFQLFGSPLGK"	"[K].skDFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.42004"	"2111.24558"	"2111.24679"	"-0.57"	"-0.00040"	"17/134"	"17"	"134"	"63153379.3706055"	"HCD"	"MS2"	"14.44551"	"716.3"	"25.651"	"55.6369"	"17175"	"17175"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1336.8"	""	"1143.8"	""	"1097.7"	""	"1063.9"	""	"1043.2"	"1087.5"	""	"547"	"16"	"34.000"	"27.000"	"0.651564374869602"	"14"	"0"	"5.233E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKDFQLFGSPLGK"	"[K].skDFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.42010"	"2111.24576"	"2111.24679"	"-0.49"	"-0.00034"	"9/134"	"9"	"134"	"27606209.7214355"	"HCD"	"MS2"	"5.214085"	"312.6"	"25.631"	"55.9500"	"17303"	"17303"	"17285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"545.3"	"3.6"	"468.4"	""	"474.9"	""	"440.0"	""	"504.6"	"524.6"	""	"539"	"14"	"34.000"	"27.000"	"1.15228197817852"	"13"	"0"	"0.0001448"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKDFQLFGSPLGK"	"[K].skDFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"528.56696"	"2111.24599"	"2111.24679"	"-0.38"	"-0.00020"	"7/134"	"7"	"134"	"19462231.6945801"	"HCD"	"MS2"	"7.42748"	"422.6"	"100.000"	"55.4929"	"17063"	"17063"	"17035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"768.9"	""	"662.5"	""	"641.4"	""	"643.6"	""	"614.8"	"658.7"	""	"546"	"11"	"34.000"	"27.000"	"1.97316156383392"	"13"	"0.0001308"	"0.0002068"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKDFQLFGSPLGK"	"[K].skDFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.42029"	"2111.24631"	"2111.24679"	"-0.23"	"-0.00016"	"17/134"	"17"	"134"	"42660781.5013428"	"HCD"	"MS2"	"23.22796"	"991.2"	"52.103"	"55.4361"	"17039"	"17039"	"17019"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1766.1"	""	"1596.3"	""	"1531.3"	""	"1467.5"	""	"1498.9"	"1511.5"	""	"544"	"14"	"34.000"	"27.000"	"1.02227773966457"	"13"	"0"	"0.0001143"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKDFQLFGSPLGK"	"[K].skDFQLFGSPLGk.[D]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.42145"	"2111.24979"	"2111.24679"	"1.42"	"0.00100"	"9/134"	"9"	"134"	"30251276.3688965"	"HCD"	"MS2"	"4.889514"	"312.2"	"22.722"	"55.7438"	"17165"	"17165"	"17147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"555.3"	""	"479.1"	""	"465.0"	""	"436.8"	""	"511.8"	"506.1"	""	"514"	"14"	"34.000"	"27.000"	"1.08876242274732"	"13"	"0"	"0.0001482"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSSMIMGDTSGYYK"	"[K].tLSSMIMGDTSGYYk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"1056.54065"	"2112.07402"	"2112.07573"	"-0.81"	"-0.00086"	"16/132"	"16"	"132"	"412921.659973145"	"HCD"	"MS2"	"0"	"39.0"	"100.000"	"63.1777"	"20198"	"20198"	"20169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.9"	""	"56.5"	""	"61.6"	""	"40.7"	"1.7"	"61.8"	"90.6"	""	"1205"	"72"	"37.000"	"30.000"	"3.49910561556591E-06"	"25"	"0"	"1.7E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSSMIMGDTSGYYK"	"[K].tLSSMIMGDTSGYYk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"1056.54089"	"2112.07451"	"2112.07573"	"-0.58"	"-0.00061"	"15/132"	"15"	"132"	"512409.657775879"	"HCD"	"MS2"	"0"	"47.5"	"100.000"	"63.2246"	"20270"	"20270"	"20243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.3"	""	"68.5"	""	"70.8"	""	"47.9"	""	"80.7"	"107.2"	""	"1205"	"37"	"37.000"	"30.000"	"0.0130905246026541"	"21"	"0"	"9.398E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSSMIMGDTSGYYK"	"[K].tLSSMIMGDTSGYYk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9846"	"0.0000"	"1"	"1"	"1"	"704.69641"	"2112.07468"	"2112.07573"	"-0.50"	"-0.00035"	"18/132"	"18"	"132"	"8110454.09881592"	"HCD"	"MS2"	"31.24061"	"280.2"	"100.000"	"63.2385"	"20276"	"20276"	"20259"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"414.9"	""	"404.9"	""	"445.4"	""	"339.1"	"4.0"	"463.3"	"581.5"	""	"1203"	"65"	"37.000"	"30.000"	"1.95990775652708E-05"	"18"	"0"	"2.617E-06"	"1.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSSMIMGDTSGYYK"	"[K].tLSSMIMGDTSGYYk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.69641"	"2112.07468"	"2112.07573"	"-0.50"	"-0.00035"	"17/132"	"17"	"132"	"7834863.69439697"	"HCD"	"MS2"	"25.29638"	"295.0"	"100.000"	"63.1133"	"20171"	"20171"	"20153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"435.7"	""	"427.1"	""	"477.9"	""	"352.2"	""	"503.0"	"601.3"	""	"1203"	"43"	"37.000"	"30.000"	"0.00274306204944705"	"16"	"0"	"1.462E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISEASVFDAYVLPK"	"[R].dISEASVFDAYVLPk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"1056.58496"	"2112.16265"	"2112.16289"	"-0.12"	"-0.00012"	"10/128"	"10"	"128"	"186359.492614746"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"74.3745"	"24813"	"24813"	"24783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.7"	""	"13.8"	""	"17.4"	""	"18.6"	""	"21.9"	"15.4"	""	"1134"	"84"	"37.000"	"30.000"	"2.41314300246833E-07"	"28"	"0"	"9.486E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQLDKDGVVLFK"	"[K].yQLDkDGVVLFk.[K]"	"N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.75977"	"2112.26474"	"2112.26719"	"-1.16"	"-0.00081"	"8/112"	"8"	"112"	"9673877.54162598"	"HCD"	"MS2"	"21.10122"	"479.4"	"72.357"	"56.0918"	"17308"	"17308"	"17291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"752.1"	""	"692.1"	""	"751.9"	""	"760.0"	"3.2"	"762.1"	"810.7"	""	"512"	"11"	"34.000"	"27.000"	"2.01020322460178"	"13"	"0"	"1.997E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQLDKDGVVLFK"	"[K].yQLDkDGVVLFk.[K]"	"N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.76031"	"2112.26639"	"2112.26719"	"-0.38"	"-0.00027"	"11/112"	"11"	"112"	"10403850.9416504"	"HCD"	"MS2"	"12.59796"	"457.0"	"67.955"	"56.3759"	"17478"	"17478"	"17461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"661.5"	"2.8"	"662.4"	""	"696.9"	""	"757.3"	"1.1"	"745.7"	"795.3"	""	"493"	"11"	"33.000"	"26.000"	"1.75314131115546"	"13"	"0"	"3.55E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSNLKPVPVIGSK"	"[R].sVSNLkPVPVIGSk.[L]"	"N-Term(TMT6plex); K6(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.78314"	"2112.33487"	"2112.33594"	"-0.50"	"-0.00035"	"16/148"	"16"	"148"	"4166024.96374512"	"HCD"	"MS2"	"0"	"260.8"	"100.000"	"43.5299"	"12256"	"12256"	"12231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.5"	""	"337.9"	""	"341.3"	""	"461.8"	""	"500.0"	"523.0"	""	"144"	"24"	"28.000"	"21.000"	"0.0293989958159538"	"14"	"0"	"6.011E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAFNGYLGPDQSK"	"[K].kAFnGYLGPDQSk.[W]"	"N-Term(TMT6plex); K1(TMT6plex); N4(Deamidated); K13(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"1"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"705.06848"	"2113.19089"	"2113.18967"	"0.58"	"0.00041"	"12/124"	"12"	"124"	"2562677.57751465"	"HCD"	"MS2"	"8.160158"	"158.1"	"100.000"	"39.5587"	"10597"	"10597"	"10566"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.1"	""	"192.6"	""	"205.3"	""	"297.3"	""	"292.3"	"295.4"	""	"1101"	"12"	"37.000"	"30.000"	"3.49749677984385"	"16"	"0"	"5.705E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYWGGLYSWDMSK"	"[R].yYWGGLYSWDMSk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.35260"	"2114.04325"	"2114.04575"	"-1.19"	"-0.00084"	"10/104"	"10"	"104"	"570290.387451172"	"HCD"	"MS2"	"6.986051"	"21.8"	"100.000"	"77.2184"	"25961"	"25961"	"25941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.0"	""	"32.5"	""	"32.3"	""	"35.2"	""	"42.2"	"39.0"	""	"985"	"17"	"36.000"	"29.000"	"0.898268633392422"	"14"	"0.0001889"	"0.0004276"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYWGGLYSWDMSK"	"[R].yYWGGLYSWDMSk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1057.52576"	"2114.04424"	"2114.04575"	"-0.72"	"-0.00076"	"7/104"	"7"	"104"	"81839.0850830078"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"77.1489"	"25933"	"25933"	"25909"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.4"	""	"13.3"	""	"9.7"	""	"9.7"	""	"13.0"	"10.1"	""	"997"	"11"	"36.000"	"29.000"	"3.89641460587282"	"13"	"0.0008731"	"0.009375"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYWGGLYSWDMSK"	"[R].yYWGGLYSWDMSk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"705.35303"	"2114.04453"	"2114.04575"	"-0.58"	"-0.00041"	"12/104"	"12"	"104"	"975911.292480469"	"HCD"	"MS2"	"12.76738"	"35.5"	"100.000"	"77.0809"	"25854"	"25854"	"25833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.2"	""	"62.0"	""	"38.9"	""	"60.1"	""	"67.5"	"67.1"	""	"996"	"48"	"36.000"	"29.000"	"0.000711589191338529"	"21"	"0"	"0.0001177"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYWGGLYSWDMSK"	"[R].yYWGGLYSWDMSk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"1057.52600"	"2114.04473"	"2114.04575"	"-0.49"	"-0.00051"	"9/104"	"9"	"104"	"130495.807739258"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"77.1362"	"25877"	"25877"	"25849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.3"	""	"18.5"	""	"16.5"	""	"20.5"	""	"30.2"	"22.6"	""	"993"	"22"	"36.000"	"29.000"	"0.298482760660447"	"15"	"0.0004166"	"0.002191"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAETFPFNPFDLTK"	"[K].eAETFPFNPFDLTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.6053"	"0.0000"	"1"	"1"	"1"	"705.37775"	"2114.11869"	"2114.12103"	"-1.11"	"-0.00078"	"13/140"	"13"	"140"	"2783280.83868408"	"HCD"	"MS2"	"4.461643"	"72.7"	"100.000"	"81.5135"	"27713"	"27713"	"27694"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.5"	""	"92.4"	""	"104.6"	""	"129.0"	""	"124.1"	"118.7"	""	"1303"	"38"	"38.000"	"31.000"	"0.0113740313262771"	"30"	"0"	"5.159E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAETFPFNPFDLTK"	"[K].eAETFPFNPFDLTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"705.37781"	"2114.11887"	"2114.12103"	"-1.02"	"-0.00072"	"10/140"	"10"	"140"	"1979002.61187744"	"HCD"	"MS2"	"10.14156"	"58.3"	"100.000"	"81.4888"	"27652"	"27652"	"27632"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.0"	""	"72.6"	""	"80.4"	""	"100.0"	"1.2"	"100.1"	"94.1"	""	"1302"	"51"	"38.000"	"31.000"	"0.000580204360725069"	"23"	"0"	"1.713E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAETFPFNPFDLTK"	"[K].eAETFPFNPFDLTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"1057.56311"	"2114.11894"	"2114.12103"	"-0.99"	"-0.00104"	"10/140"	"10"	"140"	"255836.512329102"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"81.8856"	"27814"	"27814"	"27792"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.6"	""	"18.0"	""	"27.2"	""	"33.2"	""	"36.4"	"33.2"	""	"1302"	"30"	"38.000"	"31.000"	"0.0589631923184729"	"16"	"0.0001889"	"0.0007146"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAETFPFNPFDLTK"	"[K].eAETFPFNPFDLTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"1057.56335"	"2114.11943"	"2114.12103"	"-0.75"	"-0.00080"	"13/140"	"13"	"140"	"492344.117736816"	"HCD"	"MS2"	"0"	"37.2"	"100.000"	"81.5644"	"27734"	"27734"	"27710"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.8"	""	"51.8"	""	"48.0"	""	"64.1"	""	"66.3"	"55.7"	""	"1306"	"41"	"38.000"	"31.000"	"0.00541892551186918"	"17"	"7.476E-05"	"0.0001909"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAETFPFNPFDLTK"	"[K].eAETFPFNPFDLTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"4"	"4"	"0.8936"	"0.0000"	"1"	"1"	"1"	"529.28552"	"2114.12026"	"2114.12103"	"-0.36"	"-0.00019"	"12/140"	"12"	"140"	"823081.299133301"	"HCD"	"MS2"	"31.51241"	"19.5"	"100.000"	"81.7304"	"27802"	"27802"	"27774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.3"	""	"23.3"	""	"32.0"	""	"29.7"	""	"33.9"	"32.5"	""	"1300"	"47"	"38.000"	"31.000"	"0.00139930812757084"	"21"	"0"	"0.000143"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAETFPFNPFDLTK"	"[K].eAETFPFNPFDLTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"1057.56384"	"2114.12041"	"2114.12103"	"-0.29"	"-0.00031"	"11/140"	"11"	"140"	"276626.737060547"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"81.8714"	"27859"	"27859"	"27838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.6"	""	"27.4"	""	"24.4"	""	"37.4"	""	"31.6"	"33.9"	""	"1301"	"39"	"38.000"	"31.000"	"0.0074173248680854"	"20"	"0.0001889"	"0.0004386"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAETFPFNPFDLTK"	"[K].eAETFPFNPFDLTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"1057.56384"	"2114.12041"	"2114.12103"	"-0.29"	"-0.00031"	"11/140"	"11"	"140"	"441166.658325195"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"81.5530"	"27679"	"27679"	"27648"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.4"	""	"39.8"	""	"48.6"	""	"59.3"	""	"56.9"	"60.0"	""	"1301"	"31"	"38.000"	"31.000"	"0.0552391899011122"	"19"	"0.0001889"	"0.0007441"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAETFPFNPFDLTK"	"[K].eAETFPFNPFDLTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"4"	"4"	"0.9167"	"0.0000"	"1"	"1"	"1"	"529.28564"	"2114.12075"	"2114.12103"	"-0.13"	"-0.00007"	"11/140"	"11"	"140"	"689711.64630127"	"HCD"	"MS2"	"10.59144"	"18.7"	"100.000"	"81.7377"	"27754"	"27754"	"27728"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.5"	""	"26.9"	""	"22.0"	""	"35.4"	""	"29.2"	"37.4"	""	"1312"	"36"	"38.000"	"31.000"	"0.0161028904868938"	"18"	"0.0001889"	"0.0004926"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAETFPFNPFDLTK"	"[K].eAETFPFNPFDLTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"705.37897"	"2114.12235"	"2114.12103"	"0.62"	"0.00044"	"13/140"	"13"	"140"	"6042531.84832764"	"HCD"	"MS2"	"0"	"146.9"	"100.000"	"81.8206"	"27839"	"27839"	"27822"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"236.4"	""	"178.1"	""	"209.6"	""	"267.7"	""	"252.6"	"247.1"	""	"1309"	"38"	"38.000"	"31.000"	"0.0113477471653008"	"25"	"0"	"6.769E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAETFPFNPFDLTK"	"[K].eAETFPFNPFDLTk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"705.37958"	"2114.12418"	"2114.12103"	"1.49"	"0.00105"	"10/140"	"10"	"140"	"6807177.52825928"	"HCD"	"MS2"	"0"	"172.7"	"99.657"	"81.7933"	"27777"	"27777"	"27760"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"286.4"	""	"221.3"	"3.3"	"233.9"	""	"302.5"	""	"298.4"	"289.3"	""	"1308"	"46"	"38.000"	"31.000"	"0.00162771268615668"	"25"	"0"	"9.564E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSTNGQSVNFDTIK"	"[K].vFSTnGQSVNFDTIk.[E]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.2903"	"0.0000"	"1"	"1"	"1"	"706.04877"	"2116.13175"	"2116.13266"	"-0.43"	"-0.00030"	"16/152"	"16"	"152"	"3865182.73510742"	"HCD"	"MS2"	"19.57629"	"154.7"	"100.000"	"61.6045"	"19608"	"19608"	"19587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.5"	""	"190.3"	""	"239.3"	""	"240.9"	"1.0"	"274.2"	"284.9"	""	"1281"	"62"	"38.000"	"31.000"	"4.18330118970705E-05"	"17"	"0"	"2.685E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSTNGQSVNFDTIK"	"[K].vFSTnGQSVNFDTIk.[E]"	"N-Term(TMT6plex); N5(Deamidated); K15(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"706.04926"	"2116.13321"	"2116.13266"	"0.26"	"0.00019"	"15/152"	"15"	"152"	"2447019.22546387"	"HCD"	"MS2"	"28.54864"	"122.7"	"100.000"	"61.5470"	"19531"	"19531"	"19513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.3"	""	"150.3"	""	"160.4"	""	"204.4"	""	"239.2"	"258.5"	""	"1265"	"48"	"38.000"	"31.000"	"0.000912137959839479"	"16"	"0"	"4.326E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDSSATPIWQLISK"	"[R].lVDSSATPIWQLISk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B2GV38"	"Ubiquitin-like protein 4A OS=Rattus norvegicus OX=10116 GN=Ubl4a PE=2 SV=1"	"B2GV38"	"Ubiquitin-like protein 4A OS=Rattus norvegicus OX=10116 GN=Ubl4a PE=2 SV=1"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"706.08545"	"2116.24179"	"2116.24181"	"-0.01"	"-0.00001"	"12/142"	"12"	"142"	"294194.78137207"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"83.2441"	"28419"	"28419"	"28397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.6"	""	"18.1"	""	"25.9"	""	"28.1"	""	"25.6"	"26.4"	""	"718"	"31"	"35.000"	"28.000"	"0.031411917530665"	"16"	"0.0001308"	"0.0003064"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAPSPVVSSGPFLFIK"	"[K].iAPSPVVSSGPFLFIk.[F]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9QWJ9"	"Neuropilin-1 OS=Rattus norvegicus OX=10116 GN=Nrp1 PE=1 SV=1"	"Q9QWJ9"	"Neuropilin-1 OS=Rattus norvegicus OX=10116 GN=Nrp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"706.43024"	"2117.27616"	"2117.27747"	"-0.62"	"-0.00044"	"16/130"	"16"	"130"	"788151.70123291"	"HCD"	"MS2"	"5.902814"	"23.9"	"100.000"	"80.0780"	"27128"	"27128"	"27103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.2"	""	"36.1"	""	"33.5"	""	"40.8"	""	"46.6"	"42.1"	""	"442"	"52"	"33.000"	"26.000"	"0.000150450028271317"	"18"	"0"	"5.757E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAPSPVVSSGPFLFIK"	"[K].iAPSPVVSSGPFLFIk.[F]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9QWJ9"	"Neuropilin-1 OS=Rattus norvegicus OX=10116 GN=Nrp1 PE=1 SV=1"	"Q9QWJ9"	"Neuropilin-1 OS=Rattus norvegicus OX=10116 GN=Nrp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"706.43060"	"2117.27726"	"2117.27747"	"-0.10"	"-0.00007"	"17/130"	"17"	"130"	"1084620.73571777"	"HCD"	"MS2"	"1.300295"	"30.9"	"100.000"	"80.1966"	"27125"	"27125"	"27105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.5"	""	"47.5"	""	"42.5"	""	"48.5"	""	"55.1"	"56.2"	""	"437"	"42"	"33.000"	"26.000"	"0.00124294365389379"	"17"	"0"	"3.035E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAPSPVVSSGPFLFIK"	"[K].iAPSPVVSSGPFLFIk.[F]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9QWJ9"	"Neuropilin-1 OS=Rattus norvegicus OX=10116 GN=Nrp1 PE=1 SV=1"	"Q9QWJ9"	"Neuropilin-1 OS=Rattus norvegicus OX=10116 GN=Nrp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.43066"	"2117.27744"	"2117.27747"	"-0.01"	"-0.00001"	"10/130"	"10"	"130"	"285617.956481934"	"HCD"	"MS2"	"23.72072"	"9.9"	"100.000"	"80.4816"	"27293"	"27293"	"27263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.3"	""	"12.3"	""	"15.4"	""	"13.4"	""	"18.9"	"17.3"	""	"437"	"7"	"33.000"	"26.000"	"4.50247636049495"	"13"	"0.0004557"	"0.002575"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISHLVLPVQPENALK"	"[R].iSHLVLPVqPENALk.[A]"	"N-Term(TMT6plex); Q9(Deamidated); K15(TMT6plex)"	"1"	"1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"Q5PQX1"	"Torsin-1A-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Tor1aip1 PE=1 SV=1"	"0"	"3"	"3"	"0.2632"	"0.0000"	"1"	"1"	"1"	"706.43329"	"2117.28531"	"2117.27345"	"5.60"	"0.00396"	"11/142"	"11"	"142"	"3183338.32952881"	"HCD"	"MS2"	"57.04522"	"106.5"	"100.000"	"54.7484"	"16758"	"16758"	"16736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.5"	""	"114.6"	""	"140.4"	""	"184.4"	"4.2"	"208.7"	"207.0"	""	"394"	"19"	"32.000"	"25.000"	"0.268204602445792"	"14"	"0.0001889"	"0.0003969"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.43671"	"2117.29557"	"2117.29860"	"-1.43"	"-0.00101"	"9/126"	"9"	"126"	"203653.256896973"	"HCD"	"MS2"	"15.04907"	"5.1"	"100.000"	"90.6356"	"31299"	"31299"	"31293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.6"	""	"7.8"	""	"5.5"	""	"9.4"	""	"8.9"	"13.2"	""	"341"	"22"	"32.000"	"25.000"	"0.119048624895158"	"14"	"0.0001889"	"0.001069"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1059.15186"	"2117.29643"	"2117.29860"	"-1.02"	"-0.00108"	"7/126"	"7"	"126"	"72796.9603271484"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"90.7218"	"31327"	"31327"	"31317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	"3.3"	""	"1.8"	""	"5.2"	""	"7.1"	"6.7"	""	"334"	"11"	"32.000"	"25.000"	"1.33572320586174"	"13"	"0.002424"	"0.03605"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1059.15210"	"2117.29692"	"2117.29860"	"-0.79"	"-0.00084"	"14/126"	"14"	"126"	"387817.762390137"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"90.9789"	"31418"	"31418"	"31414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.9"	""	"26.2"	""	"19.2"	""	"27.5"	""	"36.2"	"34.2"	""	"332"	"38"	"32.000"	"25.000"	"0.00263092269948545"	"15"	"0.0001889"	"0.0006563"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.43732"	"2117.29740"	"2117.29860"	"-0.57"	"-0.00040"	"16/126"	"16"	"126"	"1847165.24151611"	"HCD"	"MS2"	"0.5347769"	"35.0"	"100.000"	"91.0398"	"31413"	"31413"	"31406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.8"	""	"42.7"	""	"38.2"	""	"71.9"	""	"73.8"	"68.2"	""	"331"	"45"	"32.000"	"25.000"	"0.000535547502218535"	"15"	"0"	"8.978E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1059.15247"	"2117.29766"	"2117.29860"	"-0.45"	"-0.00047"	"10/126"	"10"	"126"	"125537.185241699"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"91.2411"	"31512"	"31512"	"31507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"4.3"	""	"6.5"	""	"9.1"	""	"13.5"	"11.8"	""	"331"	"16"	"32.000"	"25.000"	"0.398839348447632"	"14"	"0.0007076"	"0.006761"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.43744"	"2117.29776"	"2117.29860"	"-0.39"	"-0.00028"	"14/126"	"14"	"126"	"2547559.29486084"	"HCD"	"MS2"	"0.4696514"	"49.4"	"100.000"	"90.9170"	"31398"	"31398"	"31393"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.2"	""	"52.2"	""	"59.2"	""	"89.3"	""	"108.9"	"91.9"	""	"331"	"41"	"32.000"	"25.000"	"0.00146824319992283"	"15"	"0"	"6.553E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1059.15271"	"2117.29814"	"2117.29860"	"-0.22"	"-0.00023"	"13/126"	"13"	"126"	"386183.37512207"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"90.8512"	"31345"	"31345"	"31338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.6"	""	"22.6"	""	"16.2"	""	"33.6"	""	"35.0"	"30.0"	""	"326"	"36"	"32.000"	"25.000"	"0.00406618940491701"	"15"	"0.0001308"	"0.0002539"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.43768"	"2117.29850"	"2117.29860"	"-0.05"	"-0.00003"	"14/126"	"14"	"126"	"1664110.16119385"	"HCD"	"MS2"	"2.498487"	"32.2"	"100.000"	"91.1869"	"31493"	"31493"	"31485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.9"	""	"39.5"	""	"41.6"	""	"57.1"	""	"72.9"	"60.6"	""	"326"	"66"	"32.000"	"25.000"	"3.72552604950195E-06"	"17"	"0"	"1.978E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1059.15295"	"2117.29863"	"2117.29860"	"0.02"	"0.00002"	"6/126"	"6"	"126"	"98196.2872314453"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"91.1329"	"31445"	"31445"	"31440"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.2"	""	"2.9"	""	"7.3"	""	"11.4"	""	"12.7"	"10.2"	""	"326"	"17"	"32.000"	"25.000"	"0.348487820588864"	"14"	"0.002132"	"0.0321"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.43774"	"2117.29868"	"2117.29860"	"0.04"	"0.00003"	"13/126"	"13"	"126"	"200374.127258301"	"HCD"	"MS2"	"12.65179"	"6.2"	"100.000"	"90.5100"	"31227"	"31227"	"31221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"7.2"	""	"6.7"	""	"10.5"	""	"13.6"	"15.5"	""	"326"	"54"	"32.000"	"25.000"	"6.70174045400371E-05"	"16"	"0"	"8.386E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.43774"	"2117.29868"	"2117.29860"	"0.04"	"0.00003"	"15/126"	"15"	"126"	"2560184.91082764"	"HCD"	"MS2"	"0.2520209"	"47.1"	"100.000"	"90.7829"	"31320"	"31320"	"31313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.3"	""	"58.8"	""	"54.5"	""	"89.9"	"0.3"	"98.6"	"78.2"	""	"326"	"47"	"32.000"	"25.000"	"0.000328237052727569"	"15"	"0"	"9.596E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGSEIPLPPILLGK"	"[K].lPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.08020"	"2117.29897"	"2117.29860"	"0.18"	"0.00009"	"10/126"	"10"	"126"	"252817.683166504"	"HCD"	"MS2"	"5.103245"	"5.3"	"100.000"	"90.9582"	"31412"	"31412"	"31404"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"3.7"	""	"7.1"	""	"9.6"	""	"11.7"	"12.5"	""	"324"	"33"	"32.000"	"25.000"	"0.00850188085604632"	"15"	"0.0001859"	"0.0003331"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.74286"	"2118.21402"	"2118.22108"	"-3.33"	"-0.00235"	"13/168"	"13"	"168"	"1027941.34448242"	"HCD"	"MS2"	"81.34009"	"55.6"	"100.000"	"70.5118"	"23184"	"23184"	"23155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.6"	""	"67.0"	""	"80.5"	""	"103.5"	""	"103.3"	"111.3"	""	"907"	"15"	"36.000"	"29.000"	"1.30790828666792"	"14"	"7.476E-05"	"0.0001955"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"1059.61206"	"2118.21684"	"2118.22108"	"-2.00"	"-0.00212"	"12/144"	"12"	"144"	"324965.82434082"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"73.8627"	"24604"	"24604"	"24575"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.9"	""	"17.1"	""	"24.5"	""	"42.6"	""	"38.6"	"35.9"	""	"890"	"46"	"36.000"	"29.000"	"0.00123697240415288"	"25"	"0.0001308"	"0.0002116"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9155"	"0.0000"	"1"	"1"	"1"	"1059.61206"	"2118.21684"	"2118.22108"	"-2.00"	"-0.00212"	"19/168"	"19"	"168"	"2053293.8682251"	"HCD"	"MS2"	"0"	"121.8"	"100.000"	"69.6284"	"22875"	"22875"	"22857"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"171.7"	""	"143.7"	""	"155.5"	""	"208.3"	""	"230.7"	"247.5"	""	"890"	"71"	"36.000"	"29.000"	"3.53476064452305E-06"	"23"	"0"	"1.265E-06"	"1.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"1059.61279"	"2118.21831"	"2118.22108"	"-1.31"	"-0.00138"	"11/144"	"11"	"144"	"987764.350708008"	"HCD"	"MS2"	"0"	"55.4"	"100.000"	"74.1558"	"24723"	"24723"	"24703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.1"	""	"49.4"	""	"58.1"	""	"113.1"	"0.2"	"118.9"	"102.7"	""	"883"	"76"	"36.000"	"29.000"	"1.00909187169025E-06"	"26"	"0"	"2.506E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"1059.61304"	"2118.21880"	"2118.22108"	"-1.08"	"-0.00114"	"22/168"	"22"	"168"	"839882.070922852"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"69.3343"	"22755"	"22755"	"22730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.8"	""	"59.1"	""	"65.5"	""	"94.5"	"0.7"	"110.3"	"107.3"	""	"884"	"70"	"36.000"	"29.000"	"4.93653555519009E-06"	"23"	"0"	"1.8E-06"	"1.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1059.61328"	"2118.21929"	"2118.22108"	"-0.85"	"-0.00090"	"8/144"	"8"	"144"	"110353.004943848"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"74.4875"	"24859"	"24859"	"24831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.0"	""	"10.2"	""	"6.2"	""	"14.7"	""	"15.6"	"16.6"	""	"881"	"18"	"36.000"	"29.000"	"0.626535830727602"	"14"	"0.0003839"	"0.001682"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"706.74463"	"2118.21933"	"2118.22108"	"-0.82"	"-0.00058"	"20/168"	"20"	"168"	"14173814.9367676"	"HCD"	"MS2"	"0"	"156.4"	"52.626"	"69.7270"	"22915"	"22915"	"22897"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.0"	""	"188.1"	""	"205.5"	""	"264.7"	""	"309.4"	"322.2"	""	"877"	"57"	"36.000"	"29.000"	"8.14647253557709E-05"	"23"	"0"	"7.703E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.74469"	"2118.21952"	"2118.22108"	"-0.74"	"-0.00052"	"13/168"	"13"	"168"	"775905.590881348"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"70.8354"	"23368"	"23368"	"23338"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.3"	""	"34.8"	""	"43.9"	""	"48.9"	""	"88.8"	"62.1"	""	"877"	"24"	"36.000"	"29.000"	"0.17296952696001"	"14"	"0"	"0.000177"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9153"	"0.0000"	"1"	"1"	"1"	"706.74469"	"2118.21952"	"2118.22108"	"-0.74"	"-0.00052"	"15/144"	"15"	"144"	"17531128.0024414"	"HCD"	"MS2"	"4.019146"	"127.4"	"34.805"	"74.2639"	"24768"	"24768"	"24751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"182.0"	"2.8"	"136.9"	""	"144.3"	""	"237.3"	"2.6"	"273.9"	"230.0"	""	"877"	"59"	"36.000"	"29.000"	"4.95415508584022E-05"	"21"	"0"	"1.486E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"706.74481"	"2118.21988"	"2118.22108"	"-0.56"	"-0.00040"	"13/144"	"13"	"144"	"1575610.9498291"	"HCD"	"MS2"	"4.541769"	"44.8"	"100.000"	"73.6598"	"24521"	"24521"	"24495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.4"	""	"49.5"	""	"46.9"	""	"82.2"	"2.1"	"90.2"	"85.3"	""	"878"	"50"	"36.000"	"29.000"	"0.000394879438291685"	"18"	"0"	"0.0001018"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"706.74481"	"2118.21988"	"2118.22108"	"-0.56"	"-0.00040"	"19/168"	"19"	"168"	"11963601.4705811"	"HCD"	"MS2"	"18.27487"	"260.7"	"100.000"	"69.4884"	"22766"	"22766"	"22746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"400.4"	""	"328.8"	""	"349.7"	""	"440.6"	"4.1"	"474.9"	"470.5"	""	"878"	"69"	"36.000"	"29.000"	"5.89473817939522E-06"	"29"	"0"	"1.088E-06"	"1.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8795"	"0.0000"	"1"	"1"	"1"	"1059.61365"	"2118.22002"	"2118.22108"	"-0.50"	"-0.00053"	"23/168"	"23"	"168"	"922997.791381836"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"69.8578"	"22917"	"22917"	"22901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.2"	""	"66.9"	""	"84.7"	""	"101.3"	"0.5"	"110.1"	"128.8"	""	"884"	"83"	"36.000"	"29.000"	"2.29309617206601E-07"	"27"	"0"	"3.442E-07"	"1.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"706.74493"	"2118.22025"	"2118.22108"	"-0.39"	"-0.00028"	"20/168"	"20"	"168"	"17302141.0922241"	"HCD"	"MS2"	"0"	"228.7"	"62.427"	"69.8465"	"22913"	"22913"	"22901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"320.5"	"2.6"	"263.9"	""	"296.8"	""	"380.3"	""	"444.7"	"465.1"	""	"891"	"58"	"36.000"	"29.000"	"7.70633188030329E-05"	"20"	"0"	"2.404E-06"	"1.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"706.74493"	"2118.22025"	"2118.22108"	"-0.39"	"-0.00028"	"16/144"	"16"	"144"	"8175528.53167725"	"HCD"	"MS2"	"0.6901438"	"190.4"	"100.000"	"73.9251"	"24578"	"24578"	"24561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.5"	""	"197.5"	""	"222.9"	""	"369.7"	""	"403.7"	"346.3"	""	"891"	"49"	"36.000"	"29.000"	"0.000584585055013055"	"17"	"0"	"3.03E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"706.74500"	"2118.22043"	"2118.22108"	"-0.30"	"-0.00021"	"17/144"	"17"	"144"	"10787164.6633911"	"HCD"	"MS2"	"0.9155295"	"203.6"	"88.049"	"73.9549"	"24641"	"24641"	"24623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"296.2"	""	"209.3"	""	"228.9"	""	"393.8"	""	"428.2"	"379.7"	""	"891"	"53"	"36.000"	"29.000"	"0.000240906050872256"	"19"	"0"	"1.858E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"1059.61401"	"2118.22075"	"2118.22108"	"-0.15"	"-0.00016"	"17/144"	"17"	"144"	"936983.362976074"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"74.1789"	"24681"	"24681"	"24657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.1"	""	"46.7"	""	"61.7"	""	"103.0"	""	"133.8"	"108.6"	""	"889"	"63"	"36.000"	"29.000"	"2.4258936925507E-05"	"23"	"0"	"7.511E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"1059.61414"	"2118.22099"	"2118.22108"	"-0.04"	"-0.00004"	"13/144"	"13"	"144"	"278254.678222656"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"73.8766"	"24558"	"24558"	"24529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.8"	""	"17.9"	""	"14.9"	""	"28.2"	"1.1"	"35.9"	"27.9"	""	"889"	"42"	"36.000"	"29.000"	"0.0026174100480556"	"20"	"0"	"0.0001726"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.74524"	"2118.22116"	"2118.22108"	"0.04"	"0.00003"	"16/168"	"16"	"168"	"1910837.74255371"	"HCD"	"MS2"	"8.758205"	"71.3"	"100.000"	"70.0256"	"23037"	"23037"	"23018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.4"	""	"86.9"	""	"103.8"	""	"109.8"	"2.4"	"133.4"	"133.8"	""	"889"	"26"	"36.000"	"29.000"	"0.106628123250416"	"14"	"0"	"5.098E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"706.74530"	"2118.22135"	"2118.22108"	"0.13"	"0.00009"	"17/144"	"17"	"144"	"17524977.0582275"	"HCD"	"MS2"	"0.3257729"	"185.2"	"46.623"	"74.2389"	"24706"	"24706"	"24689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.7"	""	"191.5"	""	"214.2"	""	"335.9"	""	"400.7"	"366.0"	""	"887"	"53"	"36.000"	"29.000"	"0.000211297142648202"	"23"	"0"	"5.195E-06"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"706.74536"	"2118.22153"	"2118.22108"	"0.21"	"0.00015"	"18/168"	"18"	"168"	"2066850.06231689"	"HCD"	"MS2"	"11.32055"	"73.6"	"100.000"	"70.1449"	"23034"	"23034"	"23011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.0"	""	"81.8"	""	"91.8"	""	"107.9"	"0.7"	"143.4"	"164.7"	""	"890"	"42"	"36.000"	"29.000"	"0.00296729012300062"	"17"	"0"	"4.258E-06"	"1.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"1059.61450"	"2118.22173"	"2118.22108"	"0.31"	"0.00033"	"8/144"	"8"	"144"	"117344.567382813"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"74.5064"	"24815"	"24815"	"24785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.0"	""	"8.7"	""	"7.2"	""	"16.6"	""	"16.4"	"16.5"	""	"889"	"23"	"36.000"	"29.000"	"0.221244134273137"	"18"	"0.0004557"	"0.002584"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8986"	"0.0000"	"1"	"1"	"1"	"1059.61450"	"2118.22173"	"2118.22108"	"0.31"	"0.00033"	"18/168"	"18"	"168"	"1427996.48297119"	"HCD"	"MS2"	"7.18521"	"92.6"	"100.000"	"69.5411"	"22788"	"22788"	"22762"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.2"	""	"110.6"	""	"112.0"	""	"152.5"	"0.2"	"180.5"	"190.9"	""	"889"	"69"	"36.000"	"29.000"	"5.21040839986144E-06"	"24"	"0"	"1.242E-06"	"1.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.31091"	"2118.22182"	"2118.22108"	"0.35"	"0.00019"	"12/144"	"12"	"144"	"863229.129638672"	"HCD"	"MS2"	"23.92201"	"22.9"	"100.000"	"74.2177"	"24749"	"24749"	"24719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.8"	""	"32.9"	""	"36.8"	""	"37.0"	"0.8"	"32.9"	"36.4"	""	"889"	"41"	"36.000"	"29.000"	"0.00389826864998346"	"15"	"0.0001308"	"0.0002153"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9464"	"0.0000"	"1"	"1"	"1"	"706.74561"	"2118.22226"	"2118.22108"	"0.56"	"0.00040"	"13/144"	"13"	"144"	"945275.293457031"	"HCD"	"MS2"	"8.437691"	"32.8"	"100.000"	"73.6390"	"24461"	"24461"	"24433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.4"	""	"39.9"	""	"39.8"	""	"58.9"	""	"67.3"	"58.6"	""	"872"	"56"	"36.000"	"29.000"	"0.000109015057769964"	"19"	"0"	"6.486E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQVFDAK"	"[R].aLTVPELTQQVFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"4"	"4"	"0.7000"	"0.0000"	"1"	"1"	"1"	"530.31140"	"2118.22378"	"2118.22108"	"1.27"	"0.00067"	"10/144"	"10"	"144"	"965961.672668457"	"HCD"	"MS2"	"35.66874"	"17.2"	"100.000"	"74.2664"	"24717"	"24717"	"24689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.7"	""	"18.4"	""	"20.6"	""	"26.9"	""	"42.0"	"33.3"	""	"839"	"10"	"36.000"	"29.000"	"3.78209092225699"	"16"	"0.0004166"	"0.002527"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDK"	"[R].iINEPTAAAIAYGLDk.[GKR]"	"N-Term(TMT6plex); K16(TMT6plex)"	"3"	"4"	"P63018; P06761; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P55063; P63018; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"706.74615"	"2118.22391"	"2118.22108"	"1.34"	"0.00094"	"17/168"	"17"	"168"	"43679228.3447266"	"HCD"	"MS2"	"0.7097803"	"271.9"	"31.169"	"69.4313"	"22795"	"22795"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"391.5"	""	"315.6"	""	"358.4"	""	"462.7"	""	"531.9"	"518.5"	""	"827"	"54"	"36.000"	"29.000"	"0.000151521937116879"	"20"	"0"	"2.914E-06"	"1.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQLSPFPFDLLLK"	"[R].iEQLSPFPFDLLLk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"706.75769"	"2118.25852"	"2118.26149"	"-1.40"	"-0.00099"	"8/142"	"8"	"142"	"142602.315673828"	"HCD"	"MS2"	"23.98535"	"4.8"	"100.000"	"102.5115"	"34735"	"34735"	"34733"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.3"	""	"6.5"	""	"7.0"	""	"9.6"	""	"8.3"	"8.3"	""	"606"	"12"	"34.000"	"27.000"	"1.83841107865317"	"21"	"0.0003839"	"0.002021"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQLSPFPFDLLLK"	"[R].iEQLSPFPFDLLLk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"706.75787"	"2118.25907"	"2118.26149"	"-1.14"	"-0.00081"	"9/142"	"9"	"142"	"174134.763549805"	"HCD"	"MS2"	"7.235463"	"5.0"	"100.000"	"102.7650"	"34793"	"34793"	"34789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.6"	""	"4.0"	""	"10.6"	""	"10.7"	""	"8.5"	"8.1"	""	"599"	"21"	"34.000"	"27.000"	"0.256682834646496"	"16"	"0.0006037"	"0.005951"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQLSPFPFDLLLK"	"[R].iEQLSPFPFDLLLk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"706.75873"	"2118.26163"	"2118.26149"	"0.07"	"0.00005"	"5/142"	"5"	"142"	"132119.830932617"	"HCD"	"MS2"	"20.92832"	"4.8"	"100.000"	"102.1697"	"34653"	"34653"	"34649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.9"	""	"5.8"	""	"5.4"	""	"8.0"	""	"9.7"	"10.6"	""	"574"	"16"	"34.000"	"27.000"	"0.70612550239037"	"17"	"0.0009404"	"0.01029"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQLSPFPFDLLLK"	"[R].iEQLSPFPFDLLLk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"706.75879"	"2118.26181"	"2118.26149"	"0.16"	"0.00011"	"11/142"	"11"	"142"	"296071.279541016"	"HCD"	"MS2"	"10.34856"	"6.3"	"100.000"	"102.4332"	"34710"	"34710"	"34706"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.8"	""	"7.6"	""	"10.5"	""	"11.9"	""	"9.0"	"13.5"	""	"572"	"32"	"34.000"	"27.000"	"0.0189393920058704"	"18"	"0.0001889"	"0.000401"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQLSPFPFDLLLK"	"[R].iEQLSPFPFDLLLk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"706.75903"	"2118.26255"	"2118.26149"	"0.50"	"0.00035"	"9/142"	"9"	"142"	"161317.99621582"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"102.6897"	"34766"	"34766"	"34763"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"5.7"	""	"9.4"	""	"10.0"	""	"6.0"	"11.1"	""	"568"	"17"	"34.000"	"27.000"	"0.634334511283871"	"15"	"0.0003146"	"0.001446"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.5882"	"0.0000"	"1"	"1"	"1"	"530.33813"	"2118.33071"	"2118.33277"	"-0.97"	"-0.00051"	"15/120"	"15"	"120"	"3287643.090271"	"HCD"	"MS2"	"11.88023"	"95.7"	"100.000"	"63.8840"	"20539"	"20539"	"20515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.6"	""	"156.3"	""	"146.1"	""	"154.3"	"0.3"	"145.9"	"147.6"	""	"204"	"17"	"30.000"	"23.000"	"0.195254104352151"	"20"	"0.0001889"	"0.0007904"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.78198"	"2118.33139"	"2118.33277"	"-0.65"	"-0.00046"	"10/120"	"10"	"120"	"7268346.60296631"	"HCD"	"MS2"	"3.659662"	"337.9"	"80.796"	"63.8332"	"20518"	"20518"	"20499"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"609.6"	""	"572.3"	""	"528.0"	""	"549.9"	""	"426.6"	"503.2"	""	"199"	"17"	"29.000"	"22.000"	"0.208844518420541"	"14"	"0.0001308"	"0.0002386"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.33838"	"2118.33169"	"2118.33277"	"-0.51"	"-0.00027"	"9/120"	"9"	"120"	"7918558.41027832"	"HCD"	"MS2"	"2.712124"	"157.7"	"77.390"	"63.7498"	"20431"	"20431"	"20409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"279.3"	""	"268.7"	""	"251.3"	""	"246.8"	"1.2"	"206.7"	"233.4"	""	"199"	"14"	"29.000"	"22.000"	"0.371383907006742"	"13"	"0.0001889"	"0.0003766"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.33844"	"2118.33193"	"2118.33277"	"-0.39"	"-0.00021"	"10/120"	"10"	"120"	"11797434.0342407"	"HCD"	"MS2"	"22.55803"	"288.8"	"100.000"	"63.4522"	"20310"	"20310"	"20281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"511.0"	""	"505.3"	""	"469.3"	""	"484.2"	""	"360.1"	"392.4"	""	"199"	"18"	"29.000"	"22.000"	"0.146495093992056"	"14"	"7.476E-05"	"0.0001878"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.78247"	"2118.33286"	"2118.33277"	"0.04"	"0.00003"	"11/120"	"11"	"120"	"12964482.8775635"	"HCD"	"MS2"	"1.30404"	"352.7"	"47.355"	"63.7428"	"20428"	"20428"	"20409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"635.1"	""	"619.3"	""	"558.9"	""	"562.4"	""	"429.9"	"525.4"	""	"197"	"18"	"29.000"	"22.000"	"0.147040249343531"	"14"	"0"	"0.0001379"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.78247"	"2118.33286"	"2118.33277"	"0.04"	"0.00003"	"16/120"	"16"	"120"	"12233966.5844116"	"HCD"	"MS2"	"11.30396"	"634.9"	"100.000"	"63.4318"	"20301"	"20301"	"20281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1222.5"	""	"1135.1"	""	"1011.5"	""	"1055.6"	"3.5"	"719.5"	"830.1"	""	"197"	"26"	"29.000"	"22.000"	"0.0234658467731831"	"14"	"0"	"9.828E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.33881"	"2118.33339"	"2118.33277"	"0.30"	"0.00016"	"11/120"	"11"	"120"	"17861310.046875"	"HCD"	"MS2"	"9.679897"	"412.8"	"100.000"	"63.5290"	"20394"	"20394"	"20371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"774.6"	""	"743.4"	""	"622.6"	""	"695.2"	"0.8"	"492.2"	"560.8"	""	"197"	"16"	"29.000"	"22.000"	"0.266953875741248"	"13"	"0"	"0.000103"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.78296"	"2118.33432"	"2118.33277"	"0.74"	"0.00052"	"12/120"	"12"	"120"	"18936007.4804688"	"HCD"	"MS2"	"0.5790046"	"1066.8"	"100.000"	"63.5173"	"20389"	"20389"	"20371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1971.2"	""	"1897.8"	""	"1684.0"	""	"1807.3"	""	"1259.3"	"1435.6"	""	"189"	"20"	"29.000"	"22.000"	"0.0927751806153886"	"14"	"0"	"5.812E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNSYWVGEDSTYK"	"[R].vLNSYWVGEDSTYk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"1060.05798"	"2119.10869"	"2119.11119"	"-1.18"	"-0.00125"	"12/142"	"12"	"142"	"743731.486755371"	"HCD"	"MS2"	"0"	"61.2"	"100.000"	"58.6427"	"18350"	"18350"	"18329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.5"	""	"83.0"	""	"98.6"	""	"91.6"	""	"116.7"	"109.2"	""	"1363"	"36"	"38.000"	"31.000"	"0.0180911369048633"	"26"	"0"	"7.613E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNSYWVGEDSTYK"	"[R].vLNSYWVGEDSTYk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"707.04126"	"2119.10923"	"2119.11119"	"-0.93"	"-0.00066"	"12/142"	"12"	"142"	"11196270.7655029"	"HCD"	"MS2"	"45.31316"	"426.7"	"100.000"	"58.8175"	"18471"	"18471"	"18453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"573.4"	"3.5"	"576.1"	""	"634.0"	""	"627.1"	""	"809.4"	"823.7"	""	"1350"	"33"	"38.000"	"31.000"	"0.0317909695317943"	""	"0"	"6.921E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNSYWVGEDSTYK"	"[R].vLNSYWVGEDSTYk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"1060.05884"	"2119.11040"	"2119.11119"	"-0.37"	"-0.00040"	"19/142"	"19"	"142"	"707346.264038086"	"HCD"	"MS2"	"0"	"55.8"	"100.000"	"58.8340"	"18478"	"18478"	"18453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.3"	""	"78.3"	""	"80.4"	""	"87.1"	"2.1"	"99.7"	"90.3"	""	"1362"	"66"	"38.000"	"31.000"	"1.59641982323287E-05"	"31"	"0"	"6.653E-06"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNSYWVGEDSTYK"	"[R].vLNSYWVGEDSTYk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"3"	"3"	"0.1852"	"0.0000"	"1"	"1"	"1"	"707.04187"	"2119.11106"	"2119.11119"	"-0.06"	"-0.00004"	"11/142"	"11"	"142"	"9499385.38299561"	"HCD"	"MS2"	"19.02257"	"370.5"	"100.000"	"58.6747"	"18363"	"18363"	"18345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"473.2"	""	"511.9"	""	"550.4"	""	"544.8"	""	"714.0"	"727.3"	""	"1376"	"27"	"38.000"	"31.000"	"0.141445273003709"	""	"0"	"4.511E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVWFFGLQYQDTK"	"[R].eVWFFGLQYQDTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"7"	"1060.06519"	"2119.12309"	"2119.12645"	"-1.58"	"-0.00168"	"3/128"	"3"	"128"	"78888.1925048828"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"78.1354"	"26285"	"26285"	"26257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"6.1"	""	"9.1"	""	"12.7"	""	"9.4"	"10.2"	""	"1373"	"0"	"38.000"	"31.000"	"66.0146829110386"	"13"	"0.003788"	"0.09122"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVWYFGLQYVDNK"	"[R].eVWYFGLQYVDNk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"3"	"3"	"0.5476"	"0.0000"	"1"	"1"	"1"	"707.04590"	"2119.12314"	"2119.12645"	"-1.56"	"-0.00110"	"12/126"	"12"	"126"	"335588.366638184"	"HCD"	"MS2"	"52.04631"	"19.1"	"100.000"	"77.8460"	"26167"	"26167"	"26137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.2"	""	"24.7"	""	"18.2"	""	"33.9"	""	"40.4"	"37.6"	""	"1377"	"42"	"38.000"	"31.000"	"0.00450717005845318"	""	"0"	"4.165E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVWFFGLQYQDTK"	"[R].eVWFFGLQYQDTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"707.04657"	"2119.12516"	"2119.12645"	"-0.61"	"-0.00043"	"11/128"	"11"	"128"	"924845.169006348"	"HCD"	"MS2"	"0"	"31.9"	"100.000"	"77.9250"	"26250"	"26250"	"26229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.2"	""	"45.1"	""	"41.3"	""	"50.1"	""	"63.9"	"63.3"	""	"1364"	"36"	"38.000"	"31.000"	"0.0189140431137255"	"23"	"0"	"0.0001006"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVWFFGLQYQDTK"	"[R].eVWFFGLQYQDTk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"707.04767"	"2119.12845"	"2119.12645"	"0.95"	"0.00067"	"10/128"	"10"	"128"	"233054.203979492"	"HCD"	"MS2"	"19.25141"	"14.0"	"100.000"	"78.2831"	"26345"	"26345"	"26321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.3"	""	"14.2"	""	"19.6"	""	"26.5"	""	"27.7"	"28.5"	""	"1352"	"36"	"38.000"	"31.000"	"0.0153442863987346"	"24"	"7.476E-05"	"0.0001983"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSYTASYSIYDLNK"	"[R].hSYTASYSIYDLNk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"707.37317"	"2120.10495"	"2120.10644"	"-0.70"	"-0.00050"	"13/124"	"13"	"124"	"2348917.47052002"	"HCD"	"MS2"	"22.58555"	"104.1"	"100.000"	"40.8849"	"11137"	"11137"	"11109"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.4"	""	"123.9"	""	"107.3"	""	"190.9"	""	"214.6"	"239.1"	""	"1319"	"39"	"38.000"	"31.000"	"0.00837943622385033"	"17"	"0"	"9.326E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSYTASYSIYDLNK"	"[R].hSYTASYSIYDLNk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"707.37384"	"2120.10697"	"2120.10644"	"0.25"	"0.00018"	"12/124"	"12"	"124"	"2231518.41418457"	"HCD"	"MS2"	"13.21153"	"93.3"	"100.000"	"41.0980"	"11268"	"11268"	"11245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.6"	""	"108.2"	""	"108.3"	""	"166.0"	"3.9"	"200.5"	"186.4"	""	"1336"	"35"	"38.000"	"31.000"	"0.0201268802415633"	"17"	"0"	"7.978E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEYVTVQEFFSTPK"	"[R].sEYVTVQEFFSTPk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"3"	"3"	"0.6061"	"0.0000"	"1"	"1"	"1"	"707.37909"	"2120.12271"	"2120.13159"	"-4.19"	"-0.00296"	"11/140"	"11"	"140"	"1601154.8828125"	"HCD"	"MS2"	"0"	"50.9"	"100.000"	"68.8355"	"22500"	"22500"	"22474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.8"	""	"60.8"	""	"47.0"	""	"111.0"	"0.8"	"111.7"	"113.9"	""	"1291"	"33"	"38.000"	"31.000"	"0.0313253726854649"	"27"	"0"	"0.0001404"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEYVTVQEFFSTPK"	"[R].sEYVTVQEFFSTPk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"707.38306"	"2120.13462"	"2120.13159"	"1.43"	"0.00101"	"11/140"	"11"	"140"	"2714711.36993408"	"HCD"	"MS2"	"0.8518499"	"68.6"	"100.000"	"68.8137"	"22542"	"22542"	"22522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.3"	""	"61.5"	""	"67.7"	""	"136.1"	""	"167.7"	"167.0"	""	"1274"	"33"	"38.000"	"31.000"	"0.0297262025260201"	"16"	"0"	"2.753E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSPQDYVATVADALK"	"[R].aLSPQDYVATVADALk.[M]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q66HR0"	"Solute carrier family 12 member 9 OS=Rattus norvegicus OX=10116 GN=Slc12a9 PE=1 SV=1"	"Q66HR0"	"Solute carrier family 12 member 9 OS=Rattus norvegicus OX=10116 GN=Slc12a9 PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"707.40363"	"2120.19632"	"2120.20034"	"-1.90"	"-0.00134"	"10/162"	"10"	"162"	"1267199.71722412"	"HCD"	"MS2"	"29.46313"	"23.7"	"100.000"	"81.0592"	"27477"	"27477"	"27456"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.3"	""	"33.0"	""	"27.2"	""	"41.5"	"0.8"	"49.9"	"48.1"	""	"1058"	"14"	"37.000"	"30.000"	"2.00657627051078"	"19"	"0.0001889"	"0.000727"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSPQDYVATVADALK"	"[R].aLSPQDYVATVADALk.[M]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q66HR0"	"Solute carrier family 12 member 9 OS=Rattus norvegicus OX=10116 GN=Slc12a9 PE=1 SV=1"	"Q66HR0"	"Solute carrier family 12 member 9 OS=Rattus norvegicus OX=10116 GN=Slc12a9 PE=1 SV=1"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"707.40491"	"2120.20017"	"2120.20034"	"-0.08"	"-0.00006"	"15/162"	"15"	"162"	"516203.061035156"	"HCD"	"MS2"	"45.69981"	"15.0"	"100.000"	"80.8647"	"27449"	"27449"	"27422"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.2"	""	"15.8"	""	"19.7"	""	"32.9"	""	"27.2"	"28.2"	""	"1050"	"58"	"37.000"	"30.000"	"8.22544311806779E-05"	"19"	"0"	"7.766E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMGPLVLTEVLFDEK"	"[K].aMGPLVLTEVLFDEk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"707.40631"	"2120.20438"	"2120.20773"	"-1.58"	"-0.00112"	"9/124"	"9"	"124"	"208848.45904541"	"HCD"	"MS2"	"32.56474"	"5.1"	"100.000"	"96.2577"	"33103"	"33103"	"33098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"6.4"	""	"8.2"	""	"6.6"	""	"5.9"	"13.4"	""	"1017"	"30"	"37.000"	"30.000"	"0.046375751181248"	"18"	"0.0001859"	"0.0003419"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIYQSLEGAVQAGQLK"	"[K].gIYQSLEGAVQAGQLk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.40674"	"2120.20566"	"2120.21157"	"-2.79"	"-0.00197"	"14/148"	"14"	"148"	"1222777.96221924"	"HCD"	"MS2"	"37.84159"	"66.1"	"100.000"	"62.7451"	"20021"	"20021"	"19993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.2"	""	"82.8"	""	"98.1"	""	"106.4"	"0.3"	"122.0"	"120.6"	""	"1018"	"43"	"37.000"	"30.000"	"0.00279072975144715"	"16"	"0"	"6.444E-06"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMGPLVLTEVLFDEK"	"[K].aMGPLVLTEVLFDEk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"707.40680"	"2120.20584"	"2120.20773"	"-0.89"	"-0.00063"	"9/124"	"9"	"124"	"192608.246276855"	"HCD"	"MS2"	"4.023184"	"7.6"	"100.000"	"96.5316"	"33181"	"33181"	"33175"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.0"	""	"10.1"	""	"9.4"	""	"14.1"	""	"12.0"	"14.3"	""	"1019"	"27"	"37.000"	"30.000"	"0.0929274860331856"	"17"	"0.0001308"	"0.0002228"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMGPLVLTEVLFDEK"	"[K].aMGPLVLTEVLFDEk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"707.40723"	"2120.20713"	"2120.20773"	"-0.29"	"-0.00020"	"15/124"	"15"	"124"	"180872.275146484"	"HCD"	"MS2"	"33.83361"	"6.8"	"100.000"	"96.0952"	"33047"	"33047"	"33042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"10.1"	""	"11.1"	""	"8.1"	""	"12.8"	"12.0"	""	"1014"	"26"	"37.000"	"30.000"	"0.136460814559095"	"17"	"0.0001308"	"0.0003106"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMGPLVLTEVLFDEK"	"[K].aMGPLVLTEVLFDEk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"707.40747"	"2120.20786"	"2120.20773"	"0.06"	"0.00004"	"12/124"	"12"	"124"	"242321.384521484"	"HCD"	"MS2"	"3.817017"	"7.7"	"100.000"	"96.3481"	"33118"	"33118"	"33114"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.4"	""	"13.2"	""	"9.8"	""	"7.4"	""	"15.9"	"15.9"	""	"1003"	"38"	"37.000"	"30.000"	"0.0073497224223939"	"16"	"0.0001308"	"0.0002286"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEPYIAWGYPNLK"	"[R].iVEPYIAWGYPNLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"3"	"3"	"0.9074"	"0.0000"	"1"	"1"	"1"	"707.74231"	"2121.21238"	"2121.21487"	"-1.18"	"-0.00083"	"14/108"	"14"	"108"	"3182187.9744873"	"HCD"	"MS2"	"0"	"71.9"	"100.000"	"76.9485"	"25851"	"25851"	"25829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.3"	""	"130.2"	""	"123.4"	""	"110.1"	""	"82.7"	"91.9"	""	"835"	"54"	"36.000"	"29.000"	"0.000165827471903492"	"21"	"0"	"4.041E-06"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEPYIAWGYPNLK"	"[R].iVEPYIAWGYPNLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"4"	"4"	"0.8788"	"0.0000"	"1"	"1"	"1"	"531.05859"	"2121.21255"	"2121.21487"	"-1.10"	"-0.00058"	"12/108"	"12"	"108"	"1122631.98504639"	"HCD"	"MS2"	"64.49368"	"22.3"	"100.000"	"77.1385"	"25878"	"25878"	"25849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.8"	""	"37.0"	""	"36.9"	""	"32.3"	""	"32.3"	"32.0"	""	"835"	"33"	"36.000"	"29.000"	"0.0207327294205516"	"18"	"0"	"0.0001039"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEPYIAWGYPNLK"	"[R].iVEPYIAWGYPNLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"707.74243"	"2121.21274"	"2121.21487"	"-1.00"	"-0.00071"	"15/108"	"15"	"108"	"3022530.72125244"	"HCD"	"MS2"	"0"	"71.1"	"100.000"	"77.0006"	"25821"	"25821"	"25801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.6"	""	"135.0"	""	"112.3"	""	"94.5"	"1.0"	"83.9"	"96.3"	""	"827"	"56"	"36.000"	"29.000"	"0.000105797526423548"	"21"	"0"	"1.611E-06"	"1.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEPYIAWGYPNLK"	"[R].iVEPYIAWGYPNLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"707.74274"	"2121.21366"	"2121.21487"	"-0.57"	"-0.00040"	"13/108"	"13"	"108"	"1102395.56976318"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"77.3047"	"25946"	"25946"	"25929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.2"	""	"52.9"	""	"66.7"	""	"51.2"	""	"47.2"	"57.0"	""	"826"	"34"	"36.000"	"29.000"	"0.0149951236620052"	"24"	"0"	"2.107E-05"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEPYIAWGYPNLK"	"[R].iVEPYIAWGYPNLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"1061.11060"	"2121.21391"	"2121.21487"	"-0.45"	"-0.00048"	"14/108"	"14"	"108"	"326319.286376953"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"77.0660"	"25899"	"25899"	"25877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.5"	""	"40.4"	""	"29.6"	""	"23.1"	""	"24.7"	"19.6"	""	"823"	"43"	"36.000"	"29.000"	"0.00216456105119776"	"25"	"0"	"4.959E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEPYIAWGYPNLK"	"[R].iVEPYIAWGYPNLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"707.74298"	"2121.21439"	"2121.21487"	"-0.23"	"-0.00016"	"13/108"	"13"	"108"	"1177469.31286621"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"77.2548"	"25976"	"25976"	"25957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.0"	""	"61.2"	""	"55.1"	""	"58.8"	"1.0"	"50.1"	"55.6"	""	"823"	"39"	"36.000"	"29.000"	"0.00472465215245967"	"23"	"0"	"5.487E-05"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEPYIAWGYPNLK"	"[R].iVEPYIAWGYPNLk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"1061.11121"	"2121.21514"	"2121.21487"	"0.13"	"0.00013"	"14/108"	"14"	"108"	"346673.531555176"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"77.0832"	"25855"	"25855"	"25833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.0"	""	"37.0"	""	"36.7"	""	"29.2"	""	"23.1"	"24.8"	""	"823"	"35"	"36.000"	"29.000"	"0.0140724540594391"	"17"	"0.0001308"	"0.0002827"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLCHGNPTFSSETK"	"[K].iSLcHGNPTFSSETk.[S]"	"N-Term(TMT6plex); C4(Methylthio); K15(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"709.03137"	"2125.07956"	"2125.08222"	"-1.25"	"-0.00088"	"15/152"	"15"	"152"	"4340638.62744141"	"HCD"	"MS2"	"11.63942"	"140.1"	"100.000"	"44.7817"	"12766"	"12766"	"12749"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.7"	""	"212.8"	""	"175.4"	""	"257.7"	""	"200.7"	"195.4"	""	"1289"	"68"	"38.000"	"31.000"	"1.00051342791798E-05"	"18"	"0"	"2.326E-05"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLCHGNPTFSSETK"	"[K].iSLcHGNPTFSSETk.[S]"	"N-Term(TMT6plex); C4(Methylthio); K15(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9836"	"0.0000"	"1"	"1"	"1"	"709.03229"	"2125.08231"	"2125.08222"	"0.04"	"0.00003"	"14/152"	"14"	"152"	"4295896.64929199"	"HCD"	"MS2"	"0"	"145.5"	"100.000"	"44.5202"	"12610"	"12610"	"12590"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"277.2"	""	"211.8"	""	"209.4"	""	"273.1"	""	"223.0"	"184.5"	""	"1326"	"61"	"38.000"	"31.000"	"5.05258383646848E-05"	"17"	"0"	"1.129E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQTDPSGTYHAWK"	"[R].lYQTDPSGTYHAWk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"709.04169"	"2125.11051"	"2125.11186"	"-0.64"	"-0.00045"	"15/136"	"15"	"136"	"4469538.31890869"	"HCD"	"MS2"	"0"	"201.2"	"100.000"	"41.6690"	"11458"	"11458"	"11435"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.0"	""	"254.0"	""	"270.0"	""	"321.8"	""	"391.1"	"361.3"	""	"1356"	"46"	"38.000"	"31.000"	"0.00164145769368713"	"22"	"0"	"5.154E-06"	"1.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYQTDPSGTYHAWK"	"[R].lYQTDPSGTYHAWk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"709.04211"	"2125.11179"	"2125.11186"	"-0.03"	"-0.00002"	"17/136"	"17"	"136"	"4083435.95251465"	"HCD"	"MS2"	"8.700242"	"190.2"	"100.000"	"41.9076"	"11600"	"11600"	"11570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"305.1"	""	"239.6"	""	"274.7"	""	"309.9"	"0.9"	"359.7"	"310.8"	""	"1362"	"49"	"38.000"	"31.000"	"0.000869254828800526"	"18"	"0"	"7.141E-06"	"1.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETSGSFEDALLAIVK"	"[K].sETSGSFEDALLAIVk.[C]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1063.09192"	"2125.17656"	"2125.17927"	"-1.28"	"-0.00136"	"11/136"	"11"	"136"	"83626.4345092773"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"84.5762"	"28911"	"28911"	"28892"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.9"	""	"9.1"	""	"11.2"	""	"12.5"	"2.0"	"16.4"	"13.3"	""	"1144"	"38"	"37.000"	"30.000"	"0.00887965369696022"	"15"	"0.0001859"	"0.0003138"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETSGSFEDALLAIVK"	"[K].sETSGSFEDALLAIVk.[C]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1063.09229"	"2125.17729"	"2125.17927"	"-0.93"	"-0.00099"	"10/136"	"10"	"136"	"199725.548461914"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"84.3634"	"28876"	"28876"	"28849"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.6"	""	"19.2"	""	"20.8"	""	"26.6"	""	"30.8"	"24.9"	""	"1139"	"62"	"37.000"	"30.000"	"3.66010655012043E-05"	"17"	"0"	"2.855E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETSGSFEDALLAIVK"	"[K].sETSGSFEDALLAIVk.[C]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.9848"	"0.0000"	"1"	"1"	"1"	"709.06409"	"2125.17771"	"2125.17927"	"-0.74"	"-0.00052"	"17/136"	"17"	"136"	"3428376.50158691"	"HCD"	"MS2"	"2.547385"	"69.8"	"100.000"	"84.5709"	"28961"	"28961"	"28945"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.1"	""	"85.9"	""	"88.6"	""	"117.4"	"0.5"	"141.9"	"137.9"	""	"1135"	"66"	"37.000"	"30.000"	"1.45199749081895E-05"	"18"	"0"	"1.954E-06"	"1.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETSGSFEDALLAIVK"	"[K].sETSGSFEDALLAIVk.[C]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.06415"	"2125.17789"	"2125.17927"	"-0.65"	"-0.00046"	"13/136"	"13"	"136"	"426474.173950195"	"HCD"	"MS2"	"24.06409"	"10.0"	"100.000"	"84.8638"	"29079"	"29079"	"29058"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.1"	""	"13.7"	""	"14.9"	""	"14.7"	""	"20.7"	"18.9"	""	"1139"	"34"	"37.000"	"30.000"	"0.0222583890153773"	"15"	"0"	"1.647E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETSGSFEDALLAIVK"	"[K].sETSGSFEDALLAIVk.[C]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.06427"	"2125.17826"	"2125.17927"	"-0.48"	"-0.00034"	"14/136"	"14"	"136"	"1491186.39642334"	"HCD"	"MS2"	"1.354497"	"33.4"	"100.000"	"84.6105"	"28925"	"28925"	"28907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.0"	""	"32.2"	""	"41.5"	""	"65.1"	"0.6"	"66.1"	"64.7"	""	"1139"	"36"	"37.000"	"30.000"	"0.0139795672748263"	"15"	"0"	"9.21E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETSGSFEDALLAIVK"	"[K].sETSGSFEDALLAIVk.[C]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1063.09277"	"2125.17827"	"2125.17927"	"-0.47"	"-0.00050"	"8/136"	"8"	"136"	"89072.0998535156"	"HCD"	"MS2"	"8.822038"	"7.1"	"100.000"	"84.6445"	"28990"	"28990"	"28976"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.6"	""	"7.5"	""	"9.3"	""	"14.2"	""	"14.5"	"15.6"	""	"1139"	"12"	"37.000"	"30.000"	"3.97643354121949"	"13"	"0.000523"	"0.003049"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETSGSFEDALLAIVK"	"[K].sETSGSFEDALLAIVk.[C]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"709.06464"	"2125.17936"	"2125.17927"	"0.04"	"0.00003"	"15/136"	"15"	"136"	"3039368.824646"	"HCD"	"MS2"	"0"	"68.3"	"100.000"	"84.2742"	"28788"	"28788"	"28772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.3"	""	"92.3"	""	"89.8"	""	"131.7"	""	"130.2"	"120.6"	""	"1129"	"39"	"37.000"	"30.000"	"0.00710663394957807"	"27"	"0"	"1.323E-05"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETSGSFEDALLAIVK"	"[K].sETSGSFEDALLAIVk.[C]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"709.06494"	"2125.18027"	"2125.17927"	"0.47"	"0.00033"	"16/136"	"16"	"136"	"1373222.86120605"	"HCD"	"MS2"	"14.1212"	"38.1"	"100.000"	"84.2736"	"28839"	"28839"	"28817"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.4"	""	"48.0"	""	"48.8"	""	"72.7"	"0.1"	"69.4"	"59.6"	""	"1132"	"40"	"37.000"	"30.000"	"0.00600919685374478"	"27"	"0"	"8.47E-06"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SETSGSFEDALLAIVK"	"[K].sETSGSFEDALLAIVk.[C]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"1063.09485"	"2125.18242"	"2125.17927"	"1.48"	"0.00157"	"12/136"	"12"	"136"	"107093.836425781"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"84.2558"	"28781"	"28781"	"28756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.1"	""	"7.5"	""	"12.3"	""	"19.9"	""	"10.6"	"13.3"	""	"1104"	"41"	"37.000"	"30.000"	"0.00480771901655756"	"25"	"0.0001308"	"0.0002344"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTPAILESLISINNK"	"[K].gPTPAILESLISINNk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.09174"	"2125.26065"	"2125.26328"	"-1.23"	"-0.00087"	"11/142"	"11"	"142"	"611402.03704834"	"HCD"	"MS2"	"12.39389"	"25.3"	"100.000"	"81.5046"	"27659"	"27659"	"27632"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.1"	""	"33.4"	""	"33.7"	""	"43.1"	"0.8"	"46.9"	"45.8"	""	"543"	"24"	"34.000"	"27.000"	"0.103459371051409"	"14"	"0.0001859"	"0.0003543"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDSGYPWDMIFMTR"	"[R].vFDSGYPWDmIFmTR.[F]"	"N-Term(TMT6plex); M10(Oxidation); M13(Oxidation)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.33496"	"2125.99033"	"2125.99245"	"-1.00"	"-0.00071"	"10/134"	"10"	"134"	"202662.540161133"	"HCD"	"MS2"	"26.24531"	"8.0"	"100.000"	"85.3048"	"29259"	"29259"	"29234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.9"	""	"9.1"	""	"12.2"	""	"16.1"	""	"10.1"	"18.4"	""	"606"	"13"	"34.000"	"27.000"	"1.65364631910655"	"13"	"0.000523"	"0.003213"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDSGYPWDMIFMTR"	"[R].vFDSGYPWDmIFmTR.[F]"	"N-Term(TMT6plex); M10(Oxidation); M13(Oxidation)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.33539"	"2125.99161"	"2125.99245"	"-0.39"	"-0.00028"	"6/134"	"6"	"134"	"178676.501708984"	"HCD"	"MS2"	"36.37837"	"7.3"	"100.000"	"85.3470"	"29226"	"29226"	"29195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"9.3"	""	"7.5"	""	"14.9"	""	"16.4"	"16.0"	""	"614"	"16"	"34.000"	"27.000"	"0.736441706138983"	"14"	"0.0003839"	"0.001684"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDSGYPWDMIFMTR"	"[R].vFDSGYPWDmIFmTR.[F]"	"N-Term(TMT6plex); M10(Oxidation); M13(Oxidation)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.33551"	"2125.99198"	"2125.99245"	"-0.22"	"-0.00016"	"14/134"	"14"	"134"	"507254.704650879"	"HCD"	"MS2"	"44.94753"	"14.4"	"100.000"	"84.9860"	"29129"	"29129"	"29106"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"17.1"	""	"17.1"	""	"29.8"	""	"23.4"	"27.9"	""	"614"	"10"	"34.000"	"27.000"	"2.78700902764703"	"13"	"0.0006037"	"0.004308"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDSGYPWDMIFMTR"	"[R].vFDSGYPWDmIFmTR.[F]"	"N-Term(TMT6plex); M10(Oxidation); M13(Oxidation)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.33557"	"2125.99216"	"2125.99245"	"-0.14"	"-0.00010"	"12/134"	"12"	"134"	"476722.259033203"	"HCD"	"MS2"	"38.09238"	"13.6"	"100.000"	"85.0238"	"29094"	"29094"	"29067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.3"	""	"18.2"	""	"17.0"	""	"22.7"	""	"23.0"	"31.7"	""	"611"	"10"	"34.000"	"27.000"	"3.29618223641212"	"13"	"0.0006037"	"0.004324"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CVLELADQTLEMEK"	"[R].cVLELADQTLEMEk.[T]"	"N-Term(TMT6plex); C1(Methylthio); K14(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"709.36755"	"2126.08811"	"2126.09476"	"-3.13"	"-0.00222"	"11/134"	"11"	"134"	"294607.53729248"	"HCD"	"MS2"	"73.44335"	"15.0"	"100.000"	"82.8390"	"28203"	"28203"	"28176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.7"	""	"22.0"	""	"28.9"	""	"19.8"	""	"27.5"	"27.0"	""	"1232"	"25"	"37.000"	"30.000"	"0.18992437773536"	"17"	"0"	"0.000105"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CVLELADQTLEMEK"	"[R].cVLELADQTLEMEk.[T]"	"N-Term(TMT6plex); C1(Methylthio); K14(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"709.36755"	"2126.08811"	"2126.09476"	"-3.13"	"-0.00222"	"11/134"	"11"	"134"	"424454.680114746"	"HCD"	"MS2"	"76.27543"	"18.4"	"100.000"	"82.7922"	"28235"	"28235"	"28205"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.0"	""	"26.8"	""	"27.4"	""	"28.5"	""	"36.5"	"34.2"	""	"1232"	"20"	"37.000"	"30.000"	"0.650999585675613"	"16"	"0"	"0.0001681"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAGLHFFNPVPMMK"	"[R].fAGLHFFNPVPmmk.[L]"	"N-Term(TMT6plex); M12(Oxidation); M13(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"709.38074"	"2126.12766"	"2126.13313"	"-2.57"	"-0.00182"	"13/118"	"13"	"118"	"1956088.39178467"	"HCD"	"MS2"	"11.73543"	"64.7"	"100.000"	"59.5355"	"18710"	"18710"	"18681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.5"	""	"78.4"	""	"88.7"	""	"138.3"	"0.3"	"118.5"	"121.9"	""	"1270"	"21"	"38.000"	"31.000"	"0.535517571180315"	"16"	"0"	"0.0001345"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.8868"	"0.0000"	"1"	"1"	"1"	"709.38251"	"2126.13297"	"2126.13397"	"-0.47"	"-0.00033"	"15/174"	"15"	"174"	"687541.065185547"	"HCD"	"MS2"	"23.91281"	"4.9"	"100.000"	"87.8145"	"30259"	"30259"	"30252"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"6.5"	""	"10.3"	""	"4.1"	""	"9.0"	"8.9"	""	"1242"	"53"	"37.000"	"30.000"	"0.000331964467185519"	"22"	"0"	"2.224E-06"	"1.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"1063.57019"	"2126.13310"	"2126.13397"	"-0.41"	"-0.00043"	"6/174"	"6"	"174"	"68207.6162719727"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"87.7677"	"30241"	"30241"	"30232"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.2"	""	"8.5"	""	"3.4"	""	"2.0"	""	"7.7"	"4.5"	""	"1239"	"28"	"37.000"	"30.000"	"0.103048413690432"	"15"	"0.0003839"	"0.001885"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"709.38269"	"2126.13352"	"2126.13397"	"-0.21"	"-0.00015"	"19/174"	"19"	"174"	"866877.312988281"	"HCD"	"MS2"	"28.83648"	"5.9"	"100.000"	"87.7162"	"30171"	"30171"	"30159"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.1"	""	"9.6"	""	"10.2"	""	"6.5"	""	"13.4"	"8.0"	""	"1249"	"41"	"37.000"	"30.000"	"0.00533989162196485"	"16"	"0"	"1.234E-06"	"1.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"1063.57043"	"2126.13359"	"2126.13397"	"-0.18"	"-0.00019"	"4/174"	"4"	"174"	"59068.8988647461"	"HCD"	"MS2"	"8.216829"	"3.5"	"100.000"	"88.2267"	"30370"	"30370"	"30359"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"7.1"	""	"6.1"	""	"2.8"	""	"5.7"	"6.0"	""	"1249"	"11"	"37.000"	"30.000"	"4.6401545161649"	"15"	"0.007472"	"0.2851"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"1063.57043"	"2126.13359"	"2126.13397"	"-0.18"	"-0.00019"	"6/174"	"6"	"174"	"92317.3482055664"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"87.6674"	"30152"	"30152"	"30143"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"8.1"	""	"6.7"	""	"4.6"	""	"7.4"	"8.0"	""	"1249"	"27"	"37.000"	"30.000"	"0.126920695332967"	"15"	"0.0001889"	"0.0005449"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"1063.57068"	"2126.13408"	"2126.13397"	"0.05"	"0.00006"	"5/174"	"5"	"174"	"63231.0173339844"	"HCD"	"MS2"	"5.470769"	"3.6"	"100.000"	"88.2853"	"30435"	"30435"	"30431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"4.8"	""	"7.0"	""	"3.2"	""	"6.7"	"5.6"	""	"1245"	"27"	"37.000"	"30.000"	"0.114852209843922"	"19"	"0.0006037"	"0.004931"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"1063.57068"	"2126.13408"	"2126.13397"	"0.05"	"0.00006"	"18/174"	"18"	"174"	"738647.042541504"	"HCD"	"MS2"	"0"	"36.0"	"100.000"	"87.9393"	"30258"	"30258"	"30249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.0"	""	"69.7"	""	"62.4"	""	"33.9"	""	"49.3"	"68.6"	""	"1245"	"43"	"37.000"	"30.000"	"0.00317058467233104"	"22"	"0"	"7.722E-06"	"1.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.9841"	"0.0000"	"1"	"1"	"1"	"709.38293"	"2126.13425"	"2126.13397"	"0.13"	"0.00009"	"16/174"	"16"	"174"	"1930589.69592285"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"88.1021"	"30368"	"30368"	"30354"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.1"	""	"16.9"	""	"19.0"	""	"9.6"	""	"15.5"	"22.3"	""	"1252"	"63"	"37.000"	"30.000"	"3.17376183379965E-05"	"17"	"0"	"1.331E-06"	"1.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"1063.57080"	"2126.13432"	"2126.13397"	"0.17"	"0.00018"	"8/174"	"8"	"174"	"760729.013244629"	"HCD"	"MS2"	"0"	"34.2"	"100.000"	"88.0302"	"30340"	"30340"	"30336"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.0"	""	"69.3"	""	"48.8"	""	"37.0"	"0.7"	"50.1"	"54.1"	""	"1250"	"54"	"37.000"	"30.000"	"0.000257560949435832"	"24"	"0"	"6.905E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.9344"	"0.0000"	"1"	"1"	"1"	"709.38300"	"2126.13443"	"2126.13397"	"0.22"	"0.00015"	"16/174"	"16"	"174"	"1813405.15631104"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"87.9948"	"30279"	"30279"	"30269"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.5"	""	"18.4"	""	"16.6"	""	"11.1"	""	"16.0"	"22.4"	""	"1255"	"61"	"37.000"	"30.000"	"4.5563148829056E-05"	"20"	"0"	"7.308E-07"	"1.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAGLHFFNPVPMMK"	"[R].fAGLHFFNPVPmmk.[L]"	"N-Term(TMT6plex); M12(Oxidation); M13(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.38342"	"2126.13572"	"2126.13313"	"1.22"	"0.00086"	"14/118"	"14"	"118"	"2010884.23095703"	"HCD"	"MS2"	"17.56206"	"55.1"	"100.000"	"59.8757"	"18902"	"18902"	"18884"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.5"	""	"73.3"	""	"73.0"	""	"126.5"	"1.4"	"101.6"	"91.2"	""	"1246"	"23"	"37.000"	"30.000"	"0.312959433272447"	"14"	"7.476E-05"	"0.0002016"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPITEAVFSALVTGHAR"	"[R].dLPITEAVFSALVTGHAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"709.39771"	"2126.17856"	"2126.18072"	"-1.01"	"-0.00072"	"13/162"	"13"	"162"	"402863.951049805"	"HCD"	"MS2"	"19.3596"	"9.2"	"100.000"	"80.3247"	"27229"	"27229"	"27199"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.4"	""	"10.0"	""	"14.9"	""	"13.7"	""	"16.2"	"19.6"	""	"1117"	"44"	"37.000"	"30.000"	"0.00212335777845033"	"17"	"0"	"7.777E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPITEAVFSALVTGHAR"	"[R].dLPITEAVFSALVTGHAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"709.39899"	"2126.18241"	"2126.18072"	"0.79"	"0.00056"	"15/162"	"15"	"162"	"409154.231689453"	"HCD"	"MS2"	"9.527876"	"8.8"	"100.000"	"80.4062"	"27211"	"27211"	"27185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"12.3"	""	"9.8"	""	"16.3"	""	"16.8"	"17.8"	""	"1100"	"48"	"37.000"	"30.000"	"0.000842098103925116"	"23"	"0"	"5.378E-06"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGPTVSASYSLEYGK"	"[K].lPGPTVSASYSLEYGk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"709.72992"	"2127.17521"	"2127.17379"	"0.66"	"0.00047"	"15/136"	"15"	"136"	"5973612.99377441"	"HCD"	"MS2"	"16.56196"	"211.4"	"100.000"	"56.2626"	"17377"	"17377"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"281.7"	""	"272.5"	""	"294.6"	""	"330.2"	"1.4"	"415.1"	"409.5"	""	"1151"	"66"	"37.000"	"30.000"	"1.47926277298348E-05"	"27"	"0"	"2.461E-05"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDWHVANTDKK"	"[R].iLDWHVANTDkk.[S]"	"N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.75464"	"2127.24936"	"2127.25294"	"-1.68"	"-0.00119"	"8/110"	"8"	"110"	"843188.229980469"	"HCD"	"MS2"	"49.10963"	"80.1"	"100.000"	"41.5656"	"11460"	"11460"	"11437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.3"	""	"118.9"	""	"129.2"	""	"103.7"	"0.5"	"127.7"	"141.9"	""	"622"	"4"	"34.000"	"27.000"	"11.5547456249221"	"13"	"0.003197"	"0.06742"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDWHVANTDKK"	"[R].iLDWHVANTDkk.[S]"	"N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.56805"	"2127.25039"	"2127.25294"	"-1.20"	"-0.00064"	"11/110"	"11"	"110"	"21063755.0310059"	"HCD"	"MS2"	"3.861618"	"274.0"	"36.545"	"41.1898"	"11262"	"11262"	"11237"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"545.8"	""	"411.1"	""	"420.5"	""	"362.8"	"5.6"	"418.9"	"422.2"	""	"612"	"12"	"34.000"	"27.000"	"1.8143514932148"	"13"	"0.0001308"	"0.0002669"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDWHVANTDKK"	"[R].iLDWHVANTDkk.[S]"	"N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.56830"	"2127.25136"	"2127.25294"	"-0.74"	"-0.00039"	"9/110"	"9"	"110"	"16807798.5109863"	"HCD"	"MS2"	"0"	"531.6"	"90.804"	"41.4167"	"11399"	"11399"	"11373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"978.9"	""	"794.8"	""	"829.1"	""	"742.1"	"4.1"	"814.4"	"856.6"	""	"595"	"5"	"34.000"	"27.000"	"8.82037338383493"	"13"	"0.0001889"	"0.0007735"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALSGHLETVMLGLLK"	"[K].sALSGHLETVMLGLLk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.75818"	"2127.25998"	"2127.26117"	"-0.56"	"-0.00039"	"16/136"	"16"	"136"	"1645010.41027832"	"HCD"	"MS2"	"19.41741"	"43.6"	"100.000"	"77.3645"	"25970"	"25970"	"25945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.8"	""	"51.7"	""	"54.1"	""	"77.9"	""	"84.4"	"106.2"	""	"532"	"41"	"34.000"	"27.000"	"0.0020271301666676"	"15"	"0"	"5.069E-06"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALSGHLETVMLGLLK"	"[K].sALSGHLETVMLGLLk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.75830"	"2127.26035"	"2127.26117"	"-0.38"	"-0.00027"	"16/136"	"16"	"136"	"1365180.24346924"	"HCD"	"MS2"	"5.385807"	"41.1"	"100.000"	"77.3380"	"26010"	"26010"	"25989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.6"	""	"49.3"	""	"43.4"	""	"87.7"	"0.6"	"81.9"	"92.0"	""	"530"	"38"	"34.000"	"27.000"	"0.0037605024324761"	"15"	"0"	"1.066E-05"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTKPGEAGIEVPDK"	"[K].vTkPGEAGIEVPDk.[L]"	"N-Term(TMT6plex); K3(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"709.75848"	"2127.26090"	"2127.26283"	"-0.91"	"-0.00064"	"15/148"	"15"	"148"	"5514606.27783203"	"HCD"	"MS2"	"7.579459"	"272.8"	"100.000"	"38.9504"	"10390"	"10390"	"10366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.5"	""	"254.8"	""	"302.5"	""	"587.9"	""	"555.1"	"568.9"	""	"529"	"34"	"34.000"	"27.000"	"0.0115991369561484"	"16"	"0"	"2.879E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTKPGEAGIEVPDK"	"[K].vTkPGEAGIEVPDk.[L]"	"N-Term(TMT6plex); K3(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.75867"	"2127.26145"	"2127.26283"	"-0.65"	"-0.00046"	"15/148"	"15"	"148"	"5433223.9385376"	"HCD"	"MS2"	"8.804727"	"283.7"	"100.000"	"38.8460"	"10304"	"10304"	"10278"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.3"	""	"286.4"	""	"327.6"	""	"610.9"	""	"581.2"	"575.5"	""	"529"	"16"	"34.000"	"27.000"	"0.60037925332327"	"14"	"0"	"4.858E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSSMIMGDTSGYYK"	"[K].tLSSMImGDTSGYYk.[T]"	"N-Term(TMT6plex); M7(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"710.02716"	"2128.06693"	"2128.07065"	"-1.75"	"-0.00124"	"7/132"	"7"	"132"	"3103033.04705811"	"HCD"	"MS2"	"35.42054"	"169.0"	"100.000"	"55.8857"	"17277"	"17277"	"17253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"298.7"	""	"260.2"	""	"252.8"	""	"239.2"	""	"265.7"	"282.6"	""	"1045"	"24"	"37.000"	"30.000"	"0.192347388728223"	"14"	"0.0002277"	"0.001318"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HWPFMVVNDAGRPK"	"[K].hWPFmVVNDAGRPk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K14(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"710.05603"	"2128.15354"	"2128.15262"	"0.43"	"0.00031"	"7/116"	"7"	"116"	"1744590.43548584"	"HCD"	"MS2"	"47.59554"	"112.3"	"100.000"	"39.1157"	"10458"	"10458"	"10430"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.9"	""	"138.2"	""	"146.4"	""	"233.9"	"2.0"	"201.2"	"209.8"	""	"1279"	"20"	"38.000"	"31.000"	"0.587273695451249"	"20"	"0.000523"	"0.00319"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTNLYEDR"	"[K].sTLINSLFLTNLYEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5EB96"	"Septin-1 OS=Rattus norvegicus OX=10116 GN=Sept1 PE=1 SV=1"	"Q5EB96"	"Septin-1 OS=Rattus norvegicus OX=10116 GN=Sept1 PE=1 SV=1"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"710.06628"	"2128.18430"	"2128.14875"	"16.70"	"0.01185"	"6/170"	"6"	"170"	"338531.657653809"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"86.4463"	"29665"	"29665"	"29643"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.4"	""	"7.0"	""	"8.8"	""	"12.1"	""	"15.9"	"15.5"	""	"1153"	"24"	"37.000"	"30.000"	"0.240325199570648"	"21"	"0.001966"	"0.02998"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTNLYEDR"	"[K].sTLINSLFLTNLYEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5EB96"	"Septin-1 OS=Rattus norvegicus OX=10116 GN=Sept1 PE=1 SV=1"	"Q5EB96"	"Septin-1 OS=Rattus norvegicus OX=10116 GN=Sept1 PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"710.06696"	"2128.18631"	"2128.14875"	"17.65"	"0.01252"	"7/170"	"7"	"170"	"818272.812805176"	"HCD"	"MS2"	"8.50841"	"8.3"	"100.000"	"86.3989"	"29698"	"29698"	"29684"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.8"	""	"9.2"	""	"7.3"	""	"15.1"	""	"16.5"	"19.6"	""	"1143"	"43"	"37.000"	"30.000"	"0.00311183266099444"	"21"	"0.0006037"	"0.006084"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTNLYEDR"	"[K].sTLINSLFLTNLYEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5EB96"	"Septin-1 OS=Rattus norvegicus OX=10116 GN=Sept1 PE=1 SV=1"	"Q5EB96"	"Septin-1 OS=Rattus norvegicus OX=10116 GN=Sept1 PE=1 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"710.06750"	"2128.18796"	"2128.14875"	"18.42"	"0.01307"	"7/170"	"7"	"170"	"649886.184997559"	"HCD"	"MS2"	"21.84749"	"7.9"	"100.000"	"86.1138"	"29530"	"29530"	"29511"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.7"	""	"10.3"	""	"10.3"	""	"11.4"	""	"12.9"	"16.9"	""	"1134"	"38"	"37.000"	"30.000"	"0.00999040418315394"	"20"	"0.001454"	"0.02018"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILGLMMPPAHYDAK"	"[R].lILGLMMPPAHYDAk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.07300"	"2128.20444"	"2128.20630"	"-0.87"	"-0.00062"	"15/112"	"15"	"112"	"2445557.43292236"	"HCD"	"MS2"	"4.24589"	"79.0"	"100.000"	"69.0948"	"22657"	"22657"	"22634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.5"	""	"114.2"	""	"140.4"	""	"101.8"	""	"128.0"	"147.6"	""	"1019"	"43"	"37.000"	"30.000"	"0.00237216114649948"	"15"	"0"	"1.351E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYWGGLYSWDMSK"	"[R].yYWGGLYSWDmSk.[H]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"710.68427"	"2130.03824"	"2130.04067"	"-1.14"	"-0.00081"	"13/104"	"13"	"104"	"1127659.95904541"	"HCD"	"MS2"	"16.09445"	"38.0"	"100.000"	"71.0291"	"23447"	"23447"	"23418"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.0"	""	"42.3"	""	"44.0"	""	"96.2"	""	"68.7"	"66.0"	""	"856"	"34"	"36.000"	"29.000"	"0.0180070996948542"	"25"	"0"	"6.776E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYWGGLYSWDMSK"	"[R].yYWGGLYSWDmSk.[H]"	"N-Term(TMT6plex); M11(Oxidation); K13(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"710.68463"	"2130.03934"	"2130.04067"	"-0.62"	"-0.00044"	"11/104"	"11"	"104"	"1088619.04296875"	"HCD"	"MS2"	"34.07458"	"39.2"	"100.000"	"71.0930"	"23421"	"23421"	"23395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.5"	""	"36.4"	""	"42.0"	""	"100.5"	"0.3"	"80.5"	"66.5"	""	"870"	"42"	"36.000"	"29.000"	"0.00296134671031777"	"21"	"0"	"0.0001393"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGMIAGGTGITPMLQVIR"	"[K].sVGMIAGGTGITPMLQVIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"1065.60107"	"2130.19487"	"2130.19763"	"-1.30"	"-0.00138"	"11/172"	"11"	"172"	"259090.116149902"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"73.4593"	"24439"	"24439"	"24415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.1"	""	"19.0"	""	"18.3"	""	"21.3"	""	"26.7"	"23.1"	""	"1166"	"44"	"37.000"	"30.000"	"0.00237502701959798"	"25"	"0"	"3.326E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGMIAGGTGITPMLQVIR"	"[K].sVGMIAGGTGITPMLQVIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"710.73743"	"2130.19773"	"2130.19763"	"0.04"	"0.00003"	"18/172"	"18"	"172"	"906421.610534668"	"HCD"	"MS2"	"23.0087"	"39.7"	"100.000"	"73.7406"	"24502"	"24502"	"24481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.5"	""	"53.7"	""	"58.1"	""	"57.2"	""	"74.8"	"79.2"	""	"1131"	"41"	"37.000"	"30.000"	"0.00456491409605718"	"25"	"0"	"2.947E-06"	"1.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGMIAGGTGITPMLQVIR"	"[K].sVGMIAGGTGITPMLQVIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.9383"	"0.0000"	"1"	"1"	"1"	"710.73743"	"2130.19773"	"2130.19763"	"0.04"	"0.00003"	"22/172"	"22"	"172"	"3114664.42010498"	"HCD"	"MS2"	"2.083323"	"30.4"	"100.000"	"73.3719"	"24403"	"24403"	"24383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.1"	""	"43.2"	""	"44.7"	""	"50.0"	"0.0"	"58.3"	"57.1"	""	"1131"	"81"	"37.000"	"30.000"	"4.91397122761404E-07"	"23"	"0"	"2.193E-07"	"1.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGMIAGGTGITPMLQVIR"	"[K].sVGMIAGGTGITPMLQVIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"710.73773"	"2130.19864"	"2130.19763"	"0.47"	"0.00034"	"24/172"	"24"	"172"	"4318503.60076904"	"HCD"	"MS2"	"3.198828"	"35.2"	"100.000"	"73.4589"	"24387"	"24387"	"24369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.8"	""	"48.3"	""	"62.9"	""	"59.7"	""	"63.2"	"60.3"	""	"1104"	"80"	"37.000"	"30.000"	"6.13675913459437E-07"	"22"	"0"	"5.736E-08"	"1.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGMIAGGTGITPMLQVIR"	"[K].sVGMIAGGTGITPMLQVIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"1065.60327"	"2130.19927"	"2130.19763"	"0.77"	"0.00082"	"8/172"	"8"	"172"	"234235.471313477"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"73.4474"	"24383"	"24383"	"24353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.7"	""	"21.2"	""	"15.5"	""	"17.3"	""	"23.6"	"23.0"	""	"1102"	"48"	"37.000"	"30.000"	"0.000824425846508032"	"17"	"0"	"0.0001592"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPNSGSLIQVVTTDGK"	"[K].rPNSGSLIQVVTTDGk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.74829"	"2130.23032"	"2130.22829"	"0.95"	"0.00068"	"11/170"	"11"	"170"	"2431785.64093018"	"HCD"	"MS2"	"0"	"126.0"	"100.000"	"40.3757"	"10928"	"10928"	"10901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.3"	""	"164.2"	""	"170.5"	""	"222.1"	""	"230.1"	"240.0"	""	"866"	"15"	"36.000"	"29.000"	"1.25166438906425"	"13"	"0"	"0.0001267"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFMSPLLAPDVMLK"	"[K].nPFMSPLLAPDVMLk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.07294"	"2131.20426"	"2131.20596"	"-0.80"	"-0.00057"	"12/152"	"12"	"152"	"336084.032165527"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"85.8501"	"29425"	"29425"	"29400"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.8"	""	"20.3"	""	"13.4"	""	"17.4"	""	"17.4"	"18.8"	""	"1128"	"28"	"37.000"	"30.000"	"0.0885684621644124"	"14"	"0.0001889"	"0.0004773"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFMSPLLAPDVMLK"	"[K].nPFMSPLLAPDVMLk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"711.07349"	"2131.20591"	"2131.20596"	"-0.03"	"-0.00002"	"9/152"	"9"	"152"	"372554.463989258"	"HCD"	"MS2"	"14.66724"	"13.4"	"100.000"	"85.8064"	"29459"	"29459"	"29437"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.0"	""	"16.3"	""	"22.7"	""	"18.0"	"1.2"	"22.1"	"26.4"	""	"1104"	"42"	"37.000"	"30.000"	"0.00359698873521585"	"20"	"0"	"9.479E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLANSEPVGTQTAK"	"[K].kLANSEPVGTQTAk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K14(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.09357"	"2131.26615"	"2131.26898"	"-1.33"	"-0.00094"	"12/144"	"12"	"144"	"191225.329406738"	"HCD"	"MS2"	"58.86901"	"13.9"	"100.000"	"30.7064"	"6981"	"6981"	"6952"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.1"	""	"19.3"	""	"17.4"	""	"20.5"	""	"26.5"	"30.4"	""	"571"	"26"	"34.000"	"27.000"	"0.0722114577985375"	"14"	"0.0001889"	"0.000622"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IADFGLSNMMSDGEFLR"	"[K].iADFGLSNMMSDGEFLR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P54645"	"5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Prkaa1 PE=1 SV=2"	"Q09137; P54645"	"5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Prkaa2 PE=1 SV=1; 5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Prkaa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"711.34943"	"2132.03373"	"2132.03538"	"-0.77"	"-0.00055"	"14/168"	"14"	"168"	"566992.336730957"	"HCD"	"MS2"	"33.45496"	"9.7"	"100.000"	"83.6083"	"28517"	"28517"	"28492"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.6"	""	"11.7"	""	"13.7"	""	"21.4"	""	"14.7"	"18.5"	""	"805"	"26"	"36.000"	"29.000"	"0.0919953518358611"	"20"	"0.0001308"	"0.0003078"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPTELLIEMEDWK"	"[R].iGPTELLIEMEDWk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"711.39355"	"2132.16611"	"2132.17135"	"-2.46"	"-0.00175"	"8/120"	"8"	"120"	"95550.9661254883"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"94.2539"	"32510"	"32510"	"32504"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"5.2"	""	"1.9"	""	"11.3"	""	"11.5"	"7.1"	""	"1273"	"20"	"38.000"	"31.000"	"0.639437950512198"	"19"	"0.0001889"	"0.0009541"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPTELLIEMEDWK"	"[R].iGPTELLIEMEDWk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.0833"	"0.0000"	"1"	"1"	"1"	"711.39386"	"2132.16703"	"2132.17135"	"-2.03"	"-0.00144"	"5/120"	"5"	"120"	"90118.17578125"	"HCD"	"MS2"	"7.125445"	"4.4"	"100.000"	"93.8019"	"32325"	"32325"	"32320"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	"3.5"	""	"5.2"	""	"7.1"	""	"12.4"	"8.2"	""	"1267"	"12"	"38.000"	"31.000"	"3.88818230271897"	"24"	"0.0006037"	"0.004616"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPTELLIEMEDWK"	"[R].iGPTELLIEMEDWk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"711.39398"	"2132.16739"	"2132.17135"	"-1.86"	"-0.00132"	"6/120"	"6"	"120"	"118074.932312012"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"94.0849"	"32428"	"32428"	"32420"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.9"	""	"2.9"	""	"5.5"	""	"12.3"	""	"10.4"	"11.4"	""	"1269"	"13"	"38.000"	"31.000"	"2.98835113598867"	"16"	"0.0003146"	"0.001425"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPFVESLGPFTPAIFPR"	"[K].qPFVESLGPFTPAIFPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"711.39532"	"2132.17142"	"2132.17418"	"-1.29"	"-0.00092"	"12/172"	"12"	"172"	"770619.717590332"	"HCD"	"MS2"	"7.363191"	"11.0"	"100.000"	"83.9352"	"28650"	"28650"	"28628"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.1"	""	"11.5"	""	"12.8"	""	"16.8"	""	"21.9"	"28.8"	""	"1250"	"53"	"37.000"	"30.000"	"0.000312521584360612"	"20"	"0"	"1.491E-06"	"1.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPTELLIEMEDWK"	"[R].iGPTELLIEMEDWk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"711.39545"	"2132.17179"	"2132.17135"	"0.21"	"0.00015"	"10/120"	"10"	"120"	"96544.7100219727"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"93.9799"	"32409"	"32409"	"32407"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.5"	""	"6.4"	""	"6.9"	""	"3.7"	""	"11.7"	"6.8"	""	"1253"	"25"	"37.000"	"30.000"	"0.203667191811975"	"18"	"0.0001889"	"0.0007235"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPFVESLGPFTPAIFPR"	"[K].qPFVESLGPFTPAIFPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"711.39612"	"2132.17380"	"2132.17418"	"-0.18"	"-0.00013"	"14/172"	"14"	"172"	"581299.426147461"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"84.0040"	"28729"	"28729"	"28709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.7"	""	"10.7"	""	"9.7"	""	"11.2"	""	"16.1"	"17.8"	""	"1253"	"46"	"37.000"	"30.000"	"0.00164407291743035"	"20"	"0"	"2.056E-06"	"1.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPFVESLGPFTPAIFPR"	"[K].qPFVESLGPFTPAIFPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"3"	"3"	"0.9038"	"0.0000"	"1"	"1"	"1"	"711.39777"	"2132.17875"	"2132.17418"	"2.14"	"0.00152"	"16/172"	"16"	"172"	"548323.608947754"	"HCD"	"MS2"	"39.66057"	"9.4"	"100.000"	"83.6791"	"28597"	"28597"	"28571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.3"	""	"13.4"	""	"9.5"	""	"15.6"	""	"17.5"	"20.0"	""	"1232"	"52"	"37.000"	"30.000"	"0.000389565700447751"	"21"	"0"	"2.459E-06"	"1.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPFVESLGPFTPAIFPR"	"[K].qPFVESLGPFTPAIFPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"711.39813"	"2132.17984"	"2132.17418"	"2.66"	"0.00189"	"16/172"	"16"	"172"	"561638.549133301"	"HCD"	"MS2"	"30.27541"	"10.9"	"100.000"	"83.6363"	"28528"	"28528"	"28508"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.7"	""	"15.2"	""	"14.8"	""	"18.2"	""	"18.6"	"21.2"	""	"1232"	"40"	"37.000"	"30.000"	"0.00633258039645907"	"17"	"0"	"1.395E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPGYVTTPHTMDLLK"	"[K].tPGYVTTPHTMDLLk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"711.39838"	"2132.18058"	"2132.18258"	"-0.94"	"-0.00067"	"15/134"	"15"	"134"	"1897143.4206543"	"HCD"	"MS2"	"38.42002"	"102.5"	"100.000"	"46.9233"	"13589"	"13589"	"13560"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"147.2"	""	"141.8"	""	"141.7"	""	"151.9"	"0.6"	"192.4"	"195.9"	""	"1238"	"45"	"37.000"	"30.000"	"0.0020309098643702"	"16"	"0"	"3.354E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEMAVPDVHLPEVK"	"[K].iPEMAVPDVHLPEVk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"0.4615"	"0.0000"	"1"	"1"	"1"	"533.80994"	"2132.21792"	"2132.21897"	"-0.49"	"-0.00026"	"11/132"	"11"	"132"	"1807879.71203613"	"HCD"	"MS2"	"13.16383"	"35.4"	"100.000"	"64.4855"	"20785"	"20785"	"20755"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.0"	""	"47.5"	""	"47.1"	""	"47.2"	"0.7"	"72.2"	"70.5"	""	"959"	"26"	"36.000"	"29.000"	"0.116355954059202"	"28"	"0"	"0.0001647"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEMAVPDVHLPEVK"	"[K].iPEMAVPDVHLPEVk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"711.41095"	"2132.21830"	"2132.21897"	"-0.32"	"-0.00022"	"14/132"	"14"	"132"	"3786645.87304688"	"HCD"	"MS2"	"43.37428"	"136.2"	"100.000"	"64.3072"	"20659"	"20659"	"20633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.3"	""	"196.9"	""	"196.2"	""	"179.7"	""	"268.1"	"269.3"	""	"959"	"42"	"36.000"	"29.000"	"0.00332497673984944"	"16"	"0"	"0.0001462"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEMAVPDVHLPEVK"	"[K].iPEMAVPDVHLPEVk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"711.41107"	"2132.21866"	"2132.21897"	"-0.14"	"-0.00010"	"13/132"	"13"	"132"	"4503301.62561035"	"HCD"	"MS2"	"42.76632"	"159.0"	"100.000"	"64.2712"	"20697"	"20697"	"20675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"231.8"	""	"220.7"	""	"220.8"	""	"223.4"	""	"294.9"	"320.6"	""	"950"	"34"	"36.000"	"29.000"	"0.0211199852047826"	"17"	"0"	"3.981E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEMAVPDVHLPEVK"	"[K].iPEMAVPDVHLPEVk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.41113"	"2132.21885"	"2132.21897"	"-0.06"	"-0.00004"	"13/132"	"13"	"132"	"1237408.43151855"	"HCD"	"MS2"	"4.153002"	"52.1"	"100.000"	"64.6181"	"20786"	"20786"	"20761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.1"	""	"79.5"	""	"67.2"	""	"74.3"	""	"99.5"	"106.3"	""	"952"	"32"	"36.000"	"29.000"	"0.0284843919248712"	"15"	"0.0001889"	"0.0004439"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.04279"	"2133.14931"	"2133.15333"	"-1.88"	"-0.00100"	"11/138"	"11"	"138"	"4979138.62872314"	"HCD"	"MS2"	"16.8526"	"79.2"	"100.000"	"58.6172"	"18340"	"18340"	"18313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.9"	""	"113.6"	""	"103.6"	""	"128.7"	"1.9"	"154.8"	"143.2"	""	"1280"	"21"	"38.000"	"31.000"	"0.569088715429086"	"14"	"0"	"8.486E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.04333"	"2133.15151"	"2133.15333"	"-0.85"	"-0.00046"	"11/138"	"11"	"138"	"6249469.19464111"	"HCD"	"MS2"	"3.561327"	"92.1"	"100.000"	"58.9313"	"18464"	"18464"	"18441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.2"	""	"130.6"	""	"117.0"	""	"149.4"	"0.3"	"185.1"	"173.4"	""	"1263"	"30"	"38.000"	"31.000"	"0.0700443895838206"	"14"	"0"	"0.0001624"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.04340"	"2133.15175"	"2133.15333"	"-0.74"	"-0.00039"	"11/138"	"11"	"138"	"2531718.18231201"	"HCD"	"MS2"	"12.11373"	"49.1"	"100.000"	"59.2521"	"18594"	"18594"	"18569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.0"	""	"61.2"	""	"63.5"	""	"87.8"	"3.2"	"90.1"	"88.3"	""	"1259"	"38"	"37.000"	"31.000"	"0.00970500435131748"	"15"	"0"	"0.0001011"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.72217"	"2133.15195"	"2133.15333"	"-0.65"	"-0.00046"	"14/138"	"14"	"138"	"5243313.20257568"	"HCD"	"MS2"	"7.359615"	"157.3"	"100.000"	"58.5574"	"18315"	"18315"	"18297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"215.8"	""	"227.4"	""	"180.1"	""	"266.7"	"4.2"	"305.5"	"291.7"	""	"1259"	"48"	"37.000"	"31.000"	"0.00104230719200407"	"15"	"0"	"3.254E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"4"	"4"	"0.9111"	"0.0000"	"1"	"1"	"1"	"534.04352"	"2133.15224"	"2133.15333"	"-0.51"	"-0.00027"	"13/138"	"13"	"138"	"5251434.51013184"	"HCD"	"MS2"	"13.96113"	"71.6"	"100.000"	"58.7575"	"18447"	"18447"	"18421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.2"	""	"102.7"	""	"83.6"	""	"117.9"	"2.8"	"132.8"	"129.5"	""	"1260"	"45"	"37.000"	"31.000"	"0.00212980846809768"	"19"	"0"	"2.007E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.72253"	"2133.15305"	"2133.15333"	"-0.13"	"-0.00009"	"13/138"	"13"	"138"	"6278767.29431152"	"HCD"	"MS2"	"7.302793"	"181.9"	"100.000"	"58.7440"	"18441"	"18441"	"18421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.0"	""	"289.6"	""	"213.9"	""	"306.9"	""	"332.8"	"333.3"	""	"1279"	"46"	"38.000"	"31.000"	"0.00174920435047314"	"15"	"0"	"9.163E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.72272"	"2133.15360"	"2133.15333"	"0.13"	"0.00009"	"13/138"	"13"	"138"	"3206197.15216064"	"HCD"	"MS2"	"8.509467"	"131.0"	"100.000"	"59.4246"	"18718"	"18718"	"18693"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.6"	""	"208.8"	""	"168.3"	""	"191.0"	""	"247.2"	"247.7"	""	"1277"	"48"	"38.000"	"31.000"	"0.00104510734893166"	"15"	"0"	"2.099E-05"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.72272"	"2133.15360"	"2133.15333"	"0.13"	"0.00009"	"13/138"	"13"	"138"	"4234711.40435791"	"HCD"	"MS2"	"7.101652"	"147.5"	"100.000"	"59.2082"	"18576"	"18576"	"18553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"210.8"	""	"234.4"	""	"187.6"	""	"224.9"	""	"268.3"	"273.1"	""	"1277"	"50"	"38.000"	"31.000"	"0.00057698018897169"	"16"	"0"	"1.463E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.72284"	"2133.15396"	"2133.15333"	"0.30"	"0.00021"	"13/138"	"13"	"138"	"8265263.89782715"	"HCD"	"MS2"	"3.884277"	"233.1"	"100.000"	"59.0573"	"18568"	"18568"	"18549"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"309.3"	""	"350.6"	""	"293.0"	""	"368.4"	""	"453.8"	"440.2"	""	"1282"	"49"	"38.000"	"31.000"	"0.000786788547172539"	"16"	"0"	"8.162E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.04395"	"2133.15395"	"2133.15333"	"0.29"	"0.00015"	"15/138"	"15"	"138"	"6603727.12115479"	"HCD"	"MS2"	"5.93459"	"98.2"	"100.000"	"59.0673"	"18572"	"18572"	"18549"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.3"	""	"143.5"	""	"133.7"	""	"169.1"	""	"184.4"	"173.7"	""	"1282"	"28"	"38.000"	"31.000"	"0.109611981697287"	"14"	"0"	"5.235E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.72308"	"2133.15470"	"2133.15333"	"0.64"	"0.00046"	"9/138"	"9"	"138"	"2009489.68084717"	"HCD"	"MS2"	"0"	"91.1"	"100.000"	"58.2500"	"18189"	"18189"	"18171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.0"	""	"141.4"	""	"111.8"	""	"165.0"	""	"164.1"	"164.6"	""	"1286"	"34"	"38.000"	"31.000"	"0.0256573012218857"	"15"	"0"	"7.467E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.72308"	"2133.15470"	"2133.15333"	"0.64"	"0.00046"	"13/138"	"13"	"138"	"8001519.89849854"	"HCD"	"MS2"	"3.91577"	"236.7"	"100.000"	"58.8852"	"18445"	"18445"	"18425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.9"	""	"374.9"	""	"305.6"	""	"357.8"	""	"449.5"	"455.5"	""	"1286"	"48"	"38.000"	"31.000"	"0.0011097137645497"	"15"	"0"	"1.408E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQVSNFFEHTPPK"	"[K].fPQVSNFFEHTPPk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"711.72333"	"2133.15543"	"2133.15333"	"0.98"	"0.00070"	"13/138"	"13"	"138"	"2188366.2098999"	"HCD"	"MS2"	"0"	"94.0"	"100.000"	"58.4395"	"18321"	"18321"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.7"	""	"128.8"	""	"115.0"	""	"162.2"	"0.5"	"177.7"	"176.3"	""	"1295"	"52"	"38.000"	"31.000"	"0.000452105481639968"	"20"	"0"	"2.62E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLDLTSDSQPPVFK"	"[R].lDLDLTSDSQPPVFk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.73126"	"2133.17923"	"2133.18436"	"-2.40"	"-0.00171"	"13/136"	"13"	"136"	"1318369.73675537"	"HCD"	"MS2"	"23.86888"	"42.9"	"100.000"	"69.9197"	"22994"	"22994"	"22970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.3"	""	"54.2"	""	"45.9"	""	"77.3"	"0.5"	"81.8"	"90.5"	""	"1213"	"53"	"37.000"	"30.000"	"0.000297050853946963"	"16"	"0"	"1.238E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLDLTSDSQPPVFK"	"[R].lDLDLTSDSQPPVFk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.73328"	"2133.18528"	"2133.18436"	"0.43"	"0.00031"	"13/136"	"13"	"136"	"1244166.74829102"	"HCD"	"MS2"	"5.23322"	"46.3"	"100.000"	"70.1776"	"23047"	"23047"	"23027"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.2"	""	"56.7"	""	"58.1"	""	"83.6"	"0.5"	"99.1"	"77.7"	""	"1224"	"25"	"37.000"	"30.000"	"0.176909608800767"	"14"	"0.0001889"	"0.0005143"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIGSFLGSLASQPATK"	"[R].tPIGSFLGSLASQPATk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"3"	"3"	"0.7925"	"0.0000"	"1"	"1"	"1"	"711.74664"	"2133.22538"	"2133.23198"	"-3.09"	"-0.00220"	"13/166"	"13"	"166"	"2119297.18841553"	"HCD"	"MS2"	"11.12248"	"93.0"	"100.000"	"70.4620"	"23215"	"23215"	"23194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"183.8"	""	"114.5"	""	"117.0"	""	"139.6"	""	"168.1"	"157.4"	""	"913"	"53"	"36.000"	"29.000"	"0.000212051223139185"	"27"	"0"	"1.039E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSEIEYYAMLAK"	"[R].kSEIEYYAMLAk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.74683"	"2133.22593"	"2133.22327"	"1.24"	"0.00088"	"13/116"	"13"	"116"	"5452848.53607178"	"HCD"	"MS2"	"51.29904"	"263.4"	"100.000"	"55.4104"	"17029"	"17029"	"17003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"417.8"	""	"335.1"	""	"362.3"	""	"367.3"	""	"500.1"	"515.4"	""	"921"	"25"	"36.000"	"29.000"	"0.160779115277889"	"14"	"0"	"8.349E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSEIEYYAMLAK"	"[R].kSEIEYYAMLAk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.74689"	"2133.22611"	"2133.22327"	"1.33"	"0.00094"	"13/116"	"13"	"116"	"5893054.33166504"	"HCD"	"MS2"	"76.34161"	"266.4"	"100.000"	"55.6621"	"17186"	"17186"	"17157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"430.9"	""	"345.8"	""	"380.6"	""	"355.0"	""	"511.7"	"501.3"	""	"920"	"9"	"36.000"	"29.000"	"6.49767270526467"	"13"	"0"	"9.737E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIGSFLGSLASQPATK"	"[R].tPIGSFLGSLASQPATk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.74854"	"2133.23105"	"2133.23198"	"-0.43"	"-0.00031"	"15/166"	"15"	"166"	"4249927.00683594"	"HCD"	"MS2"	"2.407893"	"110.6"	"100.000"	"70.8740"	"23332"	"23332"	"23315"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.1"	""	"113.8"	""	"129.9"	""	"194.4"	""	"230.2"	"228.8"	""	"874"	"55"	"36.000"	"29.000"	"0.000131365534424854"	"16"	"0"	"1.499E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIGSFLGSLASQPATK"	"[R].tPIGSFLGSLASQPATk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"711.74860"	"2133.23124"	"2133.23198"	"-0.35"	"-0.00025"	"15/166"	"15"	"166"	"2294207.93353271"	"HCD"	"MS2"	"2.346052"	"101.9"	"100.000"	"70.5742"	"23209"	"23209"	"23187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.5"	""	"117.3"	""	"130.0"	""	"171.5"	""	"180.2"	"184.9"	""	"874"	"55"	"36.000"	"29.000"	"0.000146379896911971"	"16"	"0"	"1.7E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPIGSFLGSLASQPATK"	"[R].tPIGSFLGSLASQPATk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"711.74884"	"2133.23197"	"2133.23198"	"0.00"	"0.00000"	"15/166"	"15"	"166"	"4738498.86071777"	"HCD"	"MS2"	"3.224785"	"124.8"	"100.000"	"70.7686"	"23340"	"23340"	"23322"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.5"	""	"126.5"	""	"153.5"	""	"239.3"	""	"246.8"	"258.2"	""	"877"	"57"	"36.000"	"29.000"	"8.51078457324434E-05"	"19"	"0"	"4.456E-06"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHGQTIPSDGDIFTFTR"	"[K].iHGQTIPSDGDIFTFTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"712.04205"	"2134.11161"	"2134.11303"	"-0.67"	"-0.00048"	"16/176"	"16"	"176"	"5713879.08007813"	"HCD"	"MS2"	"6.205787"	"100.9"	"100.000"	"51.9161"	"15621"	"15621"	"15602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"138.2"	""	"125.8"	""	"128.8"	""	"177.2"	""	"186.3"	"201.9"	""	"1326"	"52"	"38.000"	"31.000"	"0.000450312008425194"	"18"	"0"	"8.808E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHGQTIPSDGDIFTFTR"	"[K].iHGQTIPSDGDIFTFTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"712.04291"	"2134.11417"	"2134.11303"	"0.53"	"0.00038"	"16/176"	"16"	"176"	"5655559.14660645"	"HCD"	"MS2"	"7.280758"	"93.5"	"100.000"	"52.1191"	"15754"	"15754"	"15734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.4"	""	"127.0"	""	"120.8"	""	"159.4"	""	"186.6"	"175.0"	""	"1336"	"42"	"38.000"	"31.000"	"0.00465346511425994"	"18"	"0"	"1.582E-05"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSVQSIVPALEIANAHR"	"[K].iSSVQSIVPALEIANAHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.07678"	"2134.21579"	"2134.21817"	"-1.11"	"-0.00079"	"20/182"	"20"	"182"	"6607496.58312988"	"HCD"	"MS2"	"6.631332"	"147.6"	"100.000"	"61.9574"	"19752"	"19752"	"19731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"203.0"	""	"188.3"	""	"221.7"	""	"243.6"	"4.5"	"269.6"	"267.7"	""	"932"	"47"	"36.000"	"29.000"	"0.000951449882216001"	"15"	"0"	"6.139E-06"	"1.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSVQSIVPALEIANAHR"	"[K].iSSVQSIVPALEIANAHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.07788"	"2134.21909"	"2134.21817"	"0.43"	"0.00031"	"21/182"	"21"	"182"	"6704862.94586182"	"HCD"	"MS2"	"7.211024"	"148.5"	"100.000"	"61.7845"	"19628"	"19628"	"19609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.2"	""	"212.7"	""	"201.8"	""	"246.7"	"1.5"	"272.6"	"261.8"	""	"917"	"55"	"36.000"	"29.000"	"0.00014499043071872"	"16"	"0"	"6.593E-06"	"1.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSILYGGVGPTTIGAK"	"[K].eLSILYGGVGPTTIGAk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9Z0U5"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"Q9Z0U5"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"712.08960"	"2134.25425"	"2134.25238"	"0.88"	"0.00062"	"17/152"	"17"	"152"	"997563.245300293"	"HCD"	"MS2"	"7.351085"	"42.8"	"100.000"	"68.2083"	"22244"	"22244"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.5"	""	"57.3"	""	"52.9"	""	"73.0"	"1.0"	"76.3"	"84.7"	""	"634"	"66"	"35.000"	"28.000"	"7.6394002089365E-06"	"26"	"0"	"2.92E-06"	"1.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.33667"	"2134.32485"	"2134.32768"	"-1.33"	"-0.00071"	"11/120"	"11"	"120"	"4950422.28442383"	"HCD"	"MS2"	"38.2344"	"135.7"	"100.000"	"56.5117"	"17533"	"17533"	"17509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.9"	""	"185.0"	""	"194.2"	""	"269.8"	""	"213.8"	"222.7"	""	"215"	"10"	"30.000"	"23.000"	"1.10766507947474"	"13"	"0.0002277"	"0.001358"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.33691"	"2134.32583"	"2134.32768"	"-0.87"	"-0.00046"	"7/120"	"7"	"120"	"4371923.72406006"	"HCD"	"MS2"	"11.58023"	"114.2"	"100.000"	"56.3109"	"17397"	"17397"	"17371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.7"	""	"161.3"	""	"145.4"	""	"239.9"	"2.4"	"189.2"	"175.2"	""	"212"	"8"	"30.000"	"23.000"	"1.6080733895069"	"13"	"0.0001889"	"0.0005368"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.11359"	"2134.32621"	"2134.32768"	"-0.69"	"-0.00049"	"12/120"	"12"	"120"	"6708446.03289795"	"HCD"	"MS2"	"1.066424"	"350.0"	"100.000"	"56.4585"	"17511"	"17511"	"17493"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"451.0"	""	"434.0"	""	"429.0"	""	"982.7"	"3.0"	"512.0"	"495.9"	""	"212"	"22"	"30.000"	"23.000"	"0.0656607539581389"	"14"	"0.0001308"	"0.0002752"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.33716"	"2134.32680"	"2134.32768"	"-0.41"	"-0.00022"	"8/120"	"8"	"120"	"14692251.515686"	"HCD"	"MS2"	"4.797791"	"255.1"	"81.331"	"56.1898"	"17401"	"17401"	"17381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"307.1"	""	"330.3"	""	"320.4"	""	"762.7"	"3.9"	"348.4"	"337.1"	""	"202"	"9"	"30.000"	"23.000"	"1.14636092382904"	"13"	"0.0001308"	"0.0003022"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.11395"	"2134.32730"	"2134.32768"	"-0.18"	"-0.00013"	"8/120"	"8"	"120"	"11437415.7145996"	"HCD"	"MS2"	"1.96914"	"579.5"	"100.000"	"55.9418"	"17246"	"17246"	"17227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"764.9"	""	"735.6"	""	"679.4"	""	"1791.2"	"0.4"	"779.0"	"721.4"	""	"198"	"18"	"29.000"	"22.000"	"0.160559199638534"	"14"	"0.0001889"	"0.0004708"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.33759"	"2134.32851"	"2134.32768"	"0.39"	"0.00021"	"11/120"	"11"	"120"	"13333096.6039429"	"HCD"	"MS2"	"6.279082"	"301.2"	"100.000"	"55.9858"	"17264"	"17264"	"17243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"374.0"	""	"384.3"	""	"368.9"	""	"880.8"	"5.7"	"422.7"	"409.1"	""	"194"	"13"	"29.000"	"22.000"	"0.448509590757283"	"13"	"0.0002277"	"0.001243"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.11438"	"2134.32859"	"2134.32768"	"0.42"	"0.00030"	"9/120"	"9"	"120"	"6273456.8147583"	"HCD"	"MS2"	"1.727184"	"341.5"	"100.000"	"56.2554"	"17374"	"17374"	"17355"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"414.0"	""	"408.2"	""	"420.3"	""	"982.5"	""	"515.3"	"492.1"	""	"194"	"25"	"29.000"	"22.000"	"0.0284296644789281"	"14"	"0.0001889"	"0.0007516"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLSGFIPLKPTVK"	"[K].mLSGFIPLkPTVk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex); K13(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.11456"	"2134.32914"	"2134.32768"	"0.68"	"0.00049"	"9/120"	"9"	"120"	"12416452.7782593"	"HCD"	"MS2"	"1.058055"	"597.7"	"100.000"	"56.1506"	"17385"	"17385"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"761.4"	""	"764.6"	""	"703.8"	""	"1846.9"	"1.5"	"807.2"	"759.3"	""	"190"	"17"	"29.000"	"22.000"	"0.199399288944235"	"14"	"0.0001889"	"0.0004252"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTWAPPPSIELTNLLVR"	"[R].vTWAPPPSIELTNLLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7209"	"0.0000"	"1"	"1"	"1"	"712.41895"	"2135.24228"	"2135.24259"	"-0.14"	"-0.00010"	"16/156"	"16"	"156"	"467117.333007813"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"86.7698"	"29796"	"29796"	"29777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.2"	""	"10.4"	""	"9.4"	""	"12.4"	""	"11.8"	"10.2"	""	"772"	"43"	"35.000"	"28.000"	"0.00180961965508073"	"28"	"0"	"6.987E-06"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTWAPPPSIELTNLLVR"	"[R].vTWAPPPSIELTNLLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.41937"	"2135.24356"	"2135.24259"	"0.46"	"0.00032"	"5/156"	"5"	"156"	"96501.2079467773"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"87.0790"	"29922"	"29922"	"29900"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"8.5"	""	"10.5"	""	"10.3"	""	"11.1"	"9.6"	""	"770"	"3"	"35.000"	"28.000"	"21.1573236435185"	"13"	"0.003383"	"0.07618"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTWAPPPSIELTNLLVR"	"[R].vTWAPPPSIELTNLLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"712.41937"	"2135.24356"	"2135.24259"	"0.46"	"0.00032"	"10/156"	"10"	"156"	"410641.678833008"	"HCD"	"MS2"	"3.050172"	"6.3"	"100.000"	"86.8148"	"29866"	"29866"	"29846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"7.7"	""	"9.6"	""	"10.8"	""	"9.6"	"13.0"	""	"770"	"38"	"35.000"	"28.000"	"0.00643369886509622"	"23"	"0"	"5.366E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DDILVYTLQEVTPNASK"	"[K].DDILVYTLQEVTPnASk.[F]"	"N14(Deamidated); K17(TMT6plex)"	"1"	"1"	"Q9JIK1"	"Cadherin-related family member 5 OS=Rattus norvegicus OX=10116 GN=Cdhr5 PE=1 SV=1"	"Q9JIK1"	"Cadherin-related family member 5 OS=Rattus norvegicus OX=10116 GN=Cdhr5 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"712.71710"	"2136.13675"	"2136.12735"	"4.40"	"0.00314"	"3/174"	"3"	"174"	"91545.9605712891"	"HCD"	"MS2"	"7.586991"	"4.1"	"100.000"	"90.3709"	"31204"	"31204"	"31194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"8.4"	""	"6.8"	""	"4.3"	""	"7.4"	"6.9"	""	"1240"	"2"	"37.000"	"30.000"	"35.3501848814064"	"14"	"0.008433"	"0.3572"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DDILVYTLQEVTPNASK"	"[K].DDILVYTLqEVTPNASk.[F]"	"Q9(Deamidated); K17(TMT6plex)"	"1"	"1"	"Q9JIK1"	"Cadherin-related family member 5 OS=Rattus norvegicus OX=10116 GN=Cdhr5 PE=1 SV=1"	"Q9JIK1"	"Cadherin-related family member 5 OS=Rattus norvegicus OX=10116 GN=Cdhr5 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"2"	"2"	"712.71710"	"2136.13675"	"2136.12735"	"4.40"	"0.00314"	"3/174"	"3"	"174"	"91545.9605712891"	"HCD"	"MS2"	"7.586991"	"4.1"	"100.000"	"90.3709"	"31204"	"31204"	"31194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"8.4"	""	"6.8"	""	"4.3"	""	"7.4"	"6.9"	""	"1240"	"2"	"37.000"	"30.000"	"35.3501848814064"	"14"	"0.008122"	"0.3424"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"MSQMYEIILFTASK"	"[].mSQmYEIILFTASk.[]"	"N-Term(TMT6plex); M4(Oxidation); K14(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"3"	"3"	"3"	"712.71710"	"2136.13675"	"2136.14851"	"-5.50"	"-0.00392"	"3/148"	"3"	"148"	"91545.9605712891"	"HCD"	"MS2"	"7.586991"	"4.1"	"100.000"	"90.3709"	"31204"	"31204"	"31194"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"8.4"	""	"6.8"	""	"4.3"	""	"7.4"	"6.9"	""	"1240"	"2"	"37.000"	"30.000"	"35.7595207303196"	"14"	"0.008737"	"0.3902"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMGPLVLTEVLFDEK"	"[K].amGPLVLTEVLFDEk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"712.73761"	"2136.19828"	"2136.20265"	"-2.05"	"-0.00146"	"10/124"	"10"	"124"	"203305.12322998"	"HCD"	"MS2"	"9.527526"	"11.2"	"100.000"	"85.6515"	"29349"	"29349"	"29321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.4"	""	"13.7"	""	"12.4"	""	"25.7"	""	"19.8"	"22.0"	""	"1058"	"27"	"37.000"	"30.000"	"0.102672862924658"	"16"	"0.0001859"	"0.0003383"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMGPLVLTEVLFDEK"	"[K].amGPLVLTEVLFDEk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"712.73895"	"2136.20230"	"2136.20265"	"-0.16"	"-0.00012"	"9/124"	"9"	"124"	"236130.610961914"	"HCD"	"MS2"	"15.06399"	"11.8"	"100.000"	"85.7298"	"29428"	"29428"	"29405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.2"	""	"13.9"	""	"13.4"	""	"23.5"	""	"24.0"	"22.3"	""	"1043"	"21"	"37.000"	"30.000"	"0.412338904501909"	"16"	"0.0001889"	"0.0007494"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQHPDGLAVLGIFLK"	"[K].aVQHPDGLAVLGIFLk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"712.76862"	"2136.29129"	"2136.29452"	"-1.51"	"-0.00107"	"12/146"	"12"	"146"	"350689.752319336"	"HCD"	"MS2"	"61.37878"	"15.8"	"100.000"	"77.3218"	"26004"	"26004"	"25973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"17.5"	""	"24.5"	""	"30.1"	""	"28.1"	"29.4"	""	"381"	"27"	"32.000"	"25.000"	"0.0374882338189154"	"17"	"0"	"3.853E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQHPDGLAVLGIFLK"	"[K].aVQHPDGLAVLGIFLk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.76880"	"2136.29184"	"2136.29452"	"-1.25"	"-0.00089"	"20/146"	"20"	"146"	"5178017.98791504"	"HCD"	"MS2"	"0"	"106.8"	"100.000"	"76.7434"	"25718"	"25718"	"25706"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.1"	""	"122.6"	""	"167.1"	""	"207.4"	""	"166.3"	"191.8"	""	"371"	"78"	"32.000"	"25.000"	"3.19406620659904E-07"	"18"	"0"	"7.038E-07"	"1.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQHPDGLAVLGIFLK"	"[K].aVQHPDGLAVLGIFLk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.82843"	"2136.29189"	"2136.29452"	"-1.23"	"-0.00066"	"11/146"	"11"	"146"	"745472.898864746"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"76.8541"	"25813"	"25813"	"25786"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.0"	""	"21.8"	""	"22.4"	""	"31.0"	""	"25.7"	"25.7"	""	"371"	"13"	"32.000"	"25.000"	"0.875676941543961"	"13"	"7.476E-05"	"0.0001844"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQHPDGLAVLGIFLK"	"[K].aVQHPDGLAVLGIFLk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.82843"	"2136.29189"	"2136.29452"	"-1.23"	"-0.00066"	"17/146"	"17"	"146"	"3408037.9487915"	"HCD"	"MS2"	"0"	"49.5"	"100.000"	"76.5095"	"25627"	"25627"	"25601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.1"	""	"64.1"	""	"85.9"	""	"90.1"	""	"77.9"	"87.0"	""	"371"	"25"	"32.000"	"25.000"	"0.057589580359781"	"14"	"0"	"2.628E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQHPDGLAVLGIFLK"	"[K].aVQHPDGLAVLGIFLk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9848"	"0.0000"	"1"	"1"	"1"	"712.76910"	"2136.29276"	"2136.29452"	"-0.82"	"-0.00059"	"17/146"	"17"	"146"	"5295437.59112549"	"HCD"	"MS2"	"0"	"110.3"	"100.000"	"76.6937"	"25748"	"25748"	"25740"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"153.7"	""	"128.4"	""	"161.6"	""	"221.1"	""	"165.7"	"215.7"	""	"367"	"66"	"32.000"	"25.000"	"5.10077384633829E-06"	"18"	"0"	"1.51E-05"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQHPDGLAVLGIFLK"	"[K].aVQHPDGLAVLGIFLk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.76953"	"2136.29404"	"2136.29452"	"-0.22"	"-0.00016"	"20/146"	"20"	"146"	"3689612.86688232"	"HCD"	"MS2"	"7.156511"	"80.6"	"100.000"	"76.4188"	"25641"	"25641"	"25615"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.6"	""	"101.8"	""	"105.4"	""	"173.6"	""	"127.4"	"145.6"	""	"368"	"77"	"32.000"	"25.000"	"4.03476108104482E-07"	"17"	"0"	"2.814E-06"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQHPDGLAVLGIFLK"	"[K].aVQHPDGLAVLGIFLk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9872"	"0.0000"	"1"	"1"	"1"	"712.76990"	"2136.29514"	"2136.29452"	"0.29"	"0.00021"	"18/146"	"18"	"146"	"3475767.50146484"	"HCD"	"MS2"	"0"	"75.6"	"100.000"	"76.4724"	"25612"	"25612"	"25585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.1"	""	"94.5"	""	"111.4"	""	"140.5"	"1.1"	"129.2"	"135.9"	""	"361"	"78"	"32.000"	"25.000"	"2.75091522060411E-07"	"19"	"0"	"3.972E-06"	"1.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQHPDGLAVLGIFLK"	"[K].aVQHPDGLAVLGIFLk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"4"	"4"	"0.9565"	"0.0000"	"1"	"1"	"1"	"534.82947"	"2136.29604"	"2136.29452"	"0.71"	"0.00038"	"13/146"	"13"	"146"	"6014872.51824951"	"HCD"	"MS2"	"37.30823"	"78.7"	"100.000"	"76.5082"	"25678"	"25678"	"25647"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.7"	""	"102.1"	""	"128.0"	""	"155.9"	"3.1"	"119.9"	"130.6"	""	"356"	"46"	"32.000"	"25.000"	"0.000406836587000827"	"17"	"0"	"1.658E-05"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNVLGHLQQGGAPTPFDR"	"[R].tNVLGHLQQGGAPTPFDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.04932"	"2137.13340"	"2137.13517"	"-0.83"	"-0.00059"	"13/200"	"13"	"200"	"2980144.82891846"	"HCD"	"MS2"	"0"	"72.1"	"100.000"	"42.3501"	"11734"	"11734"	"11708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.8"	""	"83.6"	""	"101.2"	""	"118.3"	""	"140.9"	"134.0"	""	"1247"	"34"	"37.000"	"30.000"	"0.0238142252868769"	"15"	"0"	"1.129E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNVLGHLQQGGAPTPFDR"	"[R].tNVLGHLQQGGAPTPFDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.05066"	"2137.13742"	"2137.13517"	"1.06"	"0.00075"	"16/200"	"16"	"200"	"3795594.7868042"	"HCD"	"MS2"	"9.598276"	"74.1"	"100.000"	"42.6134"	"11886"	"11886"	"11859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.7"	""	"92.4"	""	"101.6"	""	"121.8"	""	"138.3"	"135.4"	""	"1229"	"37"	"37.000"	"30.000"	"0.0125754022926731"	"15"	"0"	"8.281E-06"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGNLVFDPSSYLPK"	"[K].iEGNLVFDPSSYLPk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"0"	"3"	"3"	"0.5143"	"0.0000"	"1"	"1"	"1"	"713.06940"	"2137.19364"	"2137.19453"	"-0.42"	"-0.00030"	"9/152"	"9"	"152"	"436594.851196289"	"HCD"	"MS2"	"9.355891"	"16.9"	"100.000"	"78.9099"	"26652"	"26652"	"26623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.1"	""	"23.7"	""	"28.1"	""	"28.0"	""	"30.3"	"33.2"	""	"1062"	"35"	"37.000"	"30.000"	"0.0169861330324613"	""	"0"	"4.962E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGNLVFDPSSYLPK"	"[K].iEGNLVFDPSSYLPk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"713.06970"	"2137.19455"	"2137.19453"	"0.01"	"0.00001"	"12/152"	"12"	"152"	"387852.873596191"	"HCD"	"MS2"	"14.55575"	"16.5"	"100.000"	"78.9130"	"26602"	"26602"	"26577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.6"	""	"19.5"	""	"23.3"	""	"29.3"	""	"27.1"	"28.8"	""	"1055"	"42"	"37.000"	"30.000"	"0.00306353230242492"	""	"0"	"9.993E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTDVNVFNTILTTR"	"[R].kGTDVNVFNTILTTR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.08264"	"2137.23337"	"2137.23812"	"-2.22"	"-0.00158"	"14/162"	"14"	"162"	"5882177.88208008"	"HCD"	"MS2"	"17.28768"	"199.2"	"100.000"	"54.9453"	"16892"	"16892"	"16869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"313.2"	""	"232.1"	""	"271.8"	""	"359.6"	""	"357.0"	"352.0"	""	"737"	"52"	"35.000"	"28.000"	"0.000235742286875356"	"16"	"0"	"1.095E-06"	"1.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTDVNVFNTILTTR"	"[R].kGTDVNVFNTILTTR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"713.08301"	"2137.23447"	"2137.23812"	"-1.71"	"-0.00122"	"14/162"	"14"	"162"	"6294672.4644165"	"HCD"	"MS2"	"15.95728"	"205.2"	"100.000"	"54.7760"	"16769"	"16769"	"16752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"297.9"	""	"265.0"	""	"280.5"	""	"364.7"	""	"373.3"	"361.8"	""	"730"	"56"	"35.000"	"28.000"	"9.5783976833532E-05"	"18"	"0"	"1.305E-06"	"1.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINQILTEMDGMSTK"	"[R].vINQILTEMDGMSTk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.39124"	"2138.15915"	"2138.16013"	"-0.46"	"-0.00033"	"15/150"	"15"	"150"	"1385605.10180664"	"HCD"	"MS2"	"2.793444"	"42.3"	"100.000"	"82.9999"	"28319"	"28319"	"28301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.9"	""	"50.5"	""	"59.3"	""	"61.9"	""	"78.5"	"83.5"	""	"1275"	"69"	"38.000"	"31.000"	"7.48997191273952E-06"	"17"	"0"	"1.793E-06"	"1.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINQILTEMDGMSTK"	"[R].vINQILTEMDGMSTk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"1069.58325"	"2138.15923"	"2138.16013"	"-0.42"	"-0.00045"	"6/150"	"6"	"150"	"100517.220275879"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"82.8661"	"28265"	"28265"	"28237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.7"	""	"7.7"	""	"8.2"	""	"11.2"	""	"12.4"	"7.7"	""	"1275"	"27"	"38.000"	"31.000"	"0.142390229205447"	"15"	"0.0001889"	"0.0004146"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINQILTEMDGMSTK"	"[R].vINQILTEMDGMSTk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.39166"	"2138.16043"	"2138.16013"	"0.14"	"0.00010"	"17/150"	"17"	"150"	"2080106.50952148"	"HCD"	"MS2"	"0"	"59.9"	"100.000"	"82.9382"	"28243"	"28243"	"28224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.3"	""	"77.1"	""	"78.4"	""	"91.0"	""	"129.3"	"121.9"	""	"1274"	"56"	"38.000"	"31.000"	"0.000153864855154143"	"16"	"0"	"4.157E-06"	"1.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINQILTEMDGMSTK"	"[R].vINQILTEMDGMSTk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"1069.58472"	"2138.16216"	"2138.16013"	"0.95"	"0.00101"	"8/150"	"8"	"150"	"123325.167114258"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"82.8436"	"28205"	"28205"	"28176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"13.5"	""	"10.4"	""	"13.2"	""	"16.8"	"20.7"	""	"1241"	"24"	"37.000"	"30.000"	"0.270858073905023"	"16"	"0.0001889"	"0.001094"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINQILTEMDGMSTK"	"[R].vINQILTEMDGMSTk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"713.39282"	"2138.16391"	"2138.16013"	"1.77"	"0.00126"	"12/150"	"12"	"150"	"646591.683288574"	"HCD"	"MS2"	"12.36738"	"23.3"	"100.000"	"82.6405"	"28122"	"28122"	"28096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.1"	""	"35.0"	""	"31.5"	""	"30.2"	"0.2"	"46.4"	"44.1"	""	"1243"	"47"	"37.000"	"30.000"	"0.00124577936500745"	"18"	"0"	"3.113E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINQILTEMDGMSTK"	"[R].vINQILTEMDGMSTk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.39301"	"2138.16446"	"2138.16013"	"2.03"	"0.00144"	"15/150"	"15"	"150"	"1080768.81292725"	"HCD"	"MS2"	"3.548553"	"33.4"	"100.000"	"82.7022"	"28198"	"28198"	"28173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.7"	""	"44.6"	""	"50.0"	""	"43.4"	"1.5"	"67.4"	"63.5"	""	"1239"	"69"	"37.000"	"30.000"	"8.55148051921488E-06"	"17"	"0"	"3.51E-06"	"1.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVPFADLSNMEIGMK"	"[R].eVPFADLSNMEIGMk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"1070.06372"	"2139.12016"	"2139.12302"	"-1.33"	"-0.00143"	"12/144"	"12"	"144"	"272066.539367676"	"HCD"	"MS2"	"14.80592"	"21.3"	"100.000"	"75.2606"	"25174"	"25174"	"25151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.5"	""	"31.2"	""	"32.1"	""	"23.7"	"1.4"	"43.3"	"37.0"	""	"1304"	"26"	"38.000"	"31.000"	"0.169140494410147"	"16"	"0.0001889"	"0.0005049"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVPFADLSNMEIGMK"	"[R].eVPFADLSNMEIGMk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"1070.06433"	"2139.12139"	"2139.12302"	"-0.76"	"-0.00082"	"7/144"	"7"	"144"	"290243.590820313"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"75.2125"	"25103"	"25103"	"25073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.4"	""	"34.4"	""	"30.0"	""	"27.5"	""	"34.8"	"36.8"	""	"1300"	"25"	"38.000"	"31.000"	"0.213753560069389"	"18"	"0.0001889"	"0.0004845"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVPFADLSNMEIGMK"	"[R].eVPFADLSNMEIGMk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"713.71210"	"2139.12174"	"2139.12302"	"-0.60"	"-0.00043"	"17/144"	"17"	"144"	"3373064.21820068"	"HCD"	"MS2"	"51.96143"	"88.0"	"100.000"	"75.1478"	"25076"	"25076"	"25057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.0"	""	"142.9"	""	"135.1"	""	"105.3"	""	"149.5"	"149.6"	""	"1295"	"42"	"38.000"	"31.000"	"0.00381276266842744"	"18"	"0"	"1.558E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVPFADLSNMEIGMK"	"[R].eVPFADLSNMEIGMk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"713.71277"	"2139.12375"	"2139.12302"	"0.34"	"0.00024"	"15/144"	"15"	"144"	"3429515.35253906"	"HCD"	"MS2"	"35.6236"	"90.2"	"100.000"	"75.1429"	"25126"	"25126"	"25103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.9"	""	"143.5"	""	"128.3"	""	"111.3"	""	"161.0"	"162.0"	""	"1292"	"61"	"38.000"	"31.000"	"5.62642479111628E-05"	"19"	"0"	"2.882E-06"	"1.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKPVVSFIAGITAPPGR"	"[K].akPVVSFIAGITAPPGR.[R]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.77289"	"2139.30411"	"2139.30542"	"-0.61"	"-0.00043"	"13/170"	"13"	"170"	"2980091.33636475"	"HCD"	"MS2"	"7.831705"	"88.6"	"100.000"	"60.9038"	"19322"	"19322"	"19299"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.3"	""	"127.9"	""	"149.2"	""	"138.9"	""	"146.8"	"143.9"	""	"294"	"56"	"31.000"	"24.000"	"3.86649394808621E-05"	"16"	"0"	"7.217E-07"	"1.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AKPVVSFIAGITAPPGR"	"[K].akPVVSFIAGITAPPGR.[R]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"P13086"	"Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suclg1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.77466"	"2139.30942"	"2139.30542"	"1.87"	"0.00134"	"13/170"	"13"	"170"	"2608838.99658203"	"HCD"	"MS2"	"19.18391"	"79.3"	"100.000"	"60.8118"	"19231"	"19231"	"19209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.6"	""	"130.8"	""	"123.9"	""	"119.5"	"1.7"	"132.7"	"123.5"	""	"265"	"46"	"31.000"	"24.000"	"0.000324500879544429"	"15"	"0"	"1.386E-05"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGFGMIYDSLDYAK"	"[K].tTGFGMIYDSLDYAk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"1070.55054"	"2140.09380"	"2140.10366"	"-4.61"	"-0.00493"	"16/134"	"16"	"134"	"315802.892944336"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"71.8068"	"23713"	"23713"	"23683"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.7"	""	"38.8"	""	"55.7"	""	"43.8"	"1.6"	"51.7"	"46.2"	""	"1261"	"59"	"37.000"	"31.000"	"8.76365133980019E-05"	"25"	"0"	"5.582E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGFGMIYDSLDYAK"	"[K].tTGFGMIYDSLDYAk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"1070.55298"	"2140.09868"	"2140.10366"	"-2.33"	"-0.00249"	"17/134"	"17"	"134"	"369128.729614258"	"HCD"	"MS2"	"0"	"35.9"	"100.000"	"71.7383"	"23737"	"23737"	"23706"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.4"	""	"59.1"	""	"56.6"	""	"49.0"	""	"59.7"	"62.0"	""	"1274"	"46"	"38.000"	"31.000"	"0.00159639159418146"	"24"	"0"	"1.484E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGFGMIYDSLDYAK"	"[K].tTGFGMIYDSLDYAk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"714.03876"	"2140.10172"	"2140.10366"	"-0.91"	"-0.00065"	"17/134"	"17"	"134"	"4014855.76116943"	"HCD"	"MS2"	"5.345307"	"117.0"	"100.000"	"71.7495"	"23689"	"23689"	"23667"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.2"	""	"189.8"	""	"182.3"	""	"178.7"	""	"200.3"	"188.4"	""	"1272"	"44"	"38.000"	"31.000"	"0.00273814924272728"	"18"	"0"	"1.09E-05"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGFGMIYDSLDYAK"	"[K].tTGFGMIYDSLDYAk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.03900"	"2140.10245"	"2140.10366"	"-0.57"	"-0.00040"	"17/134"	"17"	"134"	"3527426.51104736"	"HCD"	"MS2"	"10.47749"	"101.9"	"100.000"	"71.6327"	"23693"	"23693"	"23674"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.9"	""	"159.0"	""	"154.4"	""	"132.7"	"0.4"	"193.8"	"162.7"	""	"1284"	"30"	"38.000"	"31.000"	"0.0603302365382497"	"15"	"0"	"1.483E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLTDSQIYEVLSVIR"	"[R].fQLTDSQIYEVLSVIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"714.06543"	"2140.18174"	"2140.18514"	"-1.59"	"-0.00113"	"8/166"	"8"	"166"	"104243.172851563"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"96.9942"	"33323"	"33323"	"33315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"4.6"	""	"2.8"	""	"4.0"	""	"6.1"	"6.3"	""	"1228"	"17"	"37.000"	"30.000"	"1.22509106139089"	"14"	"0.0006037"	"0.00539"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLTDSQIYEVLSVIR"	"[R].fQLTDSQIYEVLSVIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.2353"	"0.0000"	"1"	"1"	"1"	"714.06659"	"2140.18521"	"2140.18514"	"0.04"	"0.00003"	"5/166"	"5"	"166"	"79392.0009765625"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"96.7917"	"33254"	"33254"	"33248"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.3"	""	"4.2"	""	""	""	"3.4"	""	"4.1"	"5.1"	""	"1206"	"17"	"37.000"	"30.000"	"1.11510897724378"	"27"	"0.000523"	"0.002771"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLTDSQIYEVLSVIR"	"[R].fQLTDSQIYEVLSVIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.06659"	"2140.18521"	"2140.18514"	"0.04"	"0.00003"	"12/166"	"12"	"166"	"132892.690002441"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"97.0492"	"33330"	"33330"	"33324"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"4.4"	""	"4.4"	""	"4.5"	""	"4.5"	"6.7"	""	"1206"	"40"	"37.000"	"30.000"	"0.00557592998884748"	"15"	"0"	"0.0001258"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSEVPYAGINIGPVHK"	"[K].tSEVPYAGINIGPVHk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"714.07739"	"2140.21762"	"2140.21666"	"0.45"	"0.00032"	"14/136"	"14"	"136"	"2239800.66876221"	"HCD"	"MS2"	"38.74756"	"115.8"	"100.000"	"47.0733"	"13650"	"13650"	"13624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.0"	""	"130.9"	""	"143.3"	""	"198.2"	"1.7"	"234.8"	"223.9"	""	"964"	"40"	"36.000"	"29.000"	"0.0047868193533889"	"20"	"0"	"9.988E-07"	"1.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSEVPYAGINIGPVHK"	"[K].tSEVPYAGINIGPVHk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"714.07831"	"2140.22037"	"2140.21666"	"1.73"	"0.00124"	"15/136"	"15"	"136"	"1535731.1105957"	"HCD"	"MS2"	"3.915869"	"84.7"	"100.000"	"47.4522"	"13853"	"13853"	"13826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.8"	""	"108.7"	""	"101.2"	""	"146.5"	"1.6"	"172.9"	"137.7"	""	"940"	"31"	"36.000"	"29.000"	"0.0335813273255491"	"16"	"0"	"7.573E-06"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGGVPYLLPLVNK"	"[R].iAEVGGVPYLLPLVNk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1070.65833"	"2140.30937"	"2140.31458"	"-2.43"	"-0.00260"	"5/122"	"5"	"122"	"109997.899414063"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"83.6422"	"28582"	"28582"	"28555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.6"	""	"9.4"	""	"11.3"	""	"8.5"	""	"7.0"	"8.0"	""	"276"	"18"	"31.000"	"24.000"	"0.239816514367414"	"14"	"0.001966"	"0.03111"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGGVPYLLPLVNK"	"[R].iAEVGGVPYLLPLVNk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.10913"	"2140.31284"	"2140.31458"	"-0.81"	"-0.00058"	"13/122"	"13"	"122"	"469187.853149414"	"HCD"	"MS2"	"15.06522"	"13.5"	"100.000"	"83.8887"	"28682"	"28682"	"28663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.6"	""	"22.5"	""	"23.2"	""	"20.9"	""	"18.6"	"21.2"	""	"251"	"37"	"30.000"	"23.000"	"0.00265854322473687"	"15"	"0"	"6.937E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGGVPYLLPLVNK"	"[R].iAEVGGVPYLLPLVNk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.10938"	"2140.31357"	"2140.31458"	"-0.47"	"-0.00034"	"14/122"	"14"	"122"	"694047.158325195"	"HCD"	"MS2"	"8.261651"	"18.7"	"100.000"	"83.8087"	"28598"	"28598"	"28580"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.3"	""	"21.3"	""	"33.5"	""	"34.7"	""	"26.7"	"30.0"	""	"251"	"42"	"30.000"	"23.000"	"0.000784591729433486"	"15"	"0"	"3.769E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGGVPYLLPLVNK"	"[R].iAEVGGVPYLLPLVNk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"714.10938"	"2140.31357"	"2140.31458"	"-0.47"	"-0.00034"	"17/122"	"17"	"122"	"1361115.67883301"	"HCD"	"MS2"	"12.01764"	"33.5"	"100.000"	"83.5161"	"28479"	"28479"	"28460"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.3"	""	"52.6"	""	"49.3"	""	"51.8"	"0.1"	"49.6"	"55.0"	""	"251"	"58"	"30.000"	"23.000"	"1.91709540308878E-05"	"19"	"0"	"2.144E-06"	"1.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGGVPYLLPLVNK"	"[R].iAEVGGVPYLLPLVNk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.10950"	"2140.31394"	"2140.31458"	"-0.30"	"-0.00022"	"15/122"	"15"	"122"	"1289668.36206055"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"83.5387"	"28540"	"28540"	"28523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.2"	""	"42.2"	""	"48.1"	""	"45.9"	"0.7"	"39.8"	"45.1"	""	"251"	"61"	"30.000"	"23.000"	"1.08054715899167E-05"	"16"	"0"	"1.546E-06"	"1.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGGVPYLLPLVNK"	"[R].iAEVGGVPYLLPLVNk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1070.66113"	"2140.31499"	"2140.31458"	"0.19"	"0.00020"	"12/122"	"12"	"122"	"110669.295532227"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"83.6152"	"28520"	"28520"	"28492"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.4"	""	"5.5"	""	"6.8"	""	"5.4"	""	"5.8"	"7.4"	""	"246"	"43"	"30.000"	"23.000"	"0.000690089010519939"	"15"	"0"	"0.000137"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSTGGAPTFNVTVTMTAK"	"[R].TKSTGGAPTFNVTVTMTAk.[T]"	"K19(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"1"	"3"	"3"	"0.1837"	"0.0000"	"1"	"1"	"1"	"714.39349"	"2141.16593"	"2141.14737"	"8.67"	"0.00619"	"13/210"	"13"	"210"	"4629371.3873291"	"HCD"	"MS2"	"23.6721"	"145.0"	"100.000"	"52.3609"	"15853"	"15853"	"15830"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.6"	""	"207.7"	""	"227.8"	""	"173.9"	""	"296.9"	"293.3"	""	"1272"	"49"	"38.000"	"31.000"	"0.000764640180416675"	"17"	"0.0001308"	"0.0002715"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSTGGAPTFNVTVTMTAK"	"[R].TKSTGGAPTFNVTVTMTAk.[T]"	"K19(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"1"	"3"	"3"	"0.1837"	"0.0000"	"1"	"1"	"1"	"714.39374"	"2141.16666"	"2141.14737"	"9.01"	"0.00643"	"13/210"	"13"	"210"	"4451134.73950195"	"HCD"	"MS2"	"14.39659"	"136.5"	"100.000"	"52.2343"	"15751"	"15751"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"177.6"	""	"200.0"	""	"206.7"	""	"162.7"	""	"270.5"	"279.8"	""	"1257"	"49"	"37.000"	"30.000"	"0.000736724787247"	"16"	"0.0001308"	"0.0002321"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIAGQVLDINLAAEPK"	"[R].mIAGQVLDINLAAEPk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"714.41833"	"2141.24045"	"2141.24043"	"0.01"	"0.00001"	"17/154"	"17"	"154"	"1418612.01086426"	"HCD"	"MS2"	"0"	"39.7"	"100.000"	"70.5356"	"23245"	"23245"	"23226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.0"	""	"49.8"	""	"36.0"	""	"63.8"	""	"95.2"	"88.4"	""	"680"	"60"	"35.000"	"28.000"	"3.47119424460611E-05"	"25"	"0"	"2.624E-06"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIAGQVLDINLAAEPK"	"[R].mIAGQVLDINLAAEPk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"714.41870"	"2141.24155"	"2141.24043"	"0.52"	"0.00037"	"17/154"	"17"	"154"	"1274944.40734863"	"HCD"	"MS2"	"5.718289"	"41.7"	"100.000"	"70.7216"	"23269"	"23269"	"23251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.8"	""	"47.1"	""	"40.4"	""	"66.9"	""	"84.1"	"97.6"	""	"679"	"66"	"35.000"	"28.000"	"8.88873131290347E-06"	"27"	"0"	"1.572E-06"	"1.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.1579"	"0.0000"	"1"	"1"	"1"	"714.71320"	"2142.12503"	"2142.12888"	"-1.80"	"-0.00128"	"10/174"	"10"	"174"	"275848.993469238"	"HCD"	"MS2"	"58.04874"	"12.4"	"100.000"	"80.1910"	"27174"	"27174"	"27151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.4"	""	"15.3"	""	"17.0"	""	"26.0"	""	"27.5"	"18.9"	""	"1314"	"19"	"38.000"	"31.000"	"0.740568728707311"	"20"	"0.0001308"	"0.0002385"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"1071.56628"	"2142.12529"	"2142.12888"	"-1.68"	"-0.00180"	"7/174"	"7"	"174"	"69197.0100708008"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"79.6831"	"26967"	"26967"	"26943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.8"	""	"5.7"	""	"6.3"	""	""	""	"5.4"	"3.6"	""	"1310"	"50"	"38.000"	"31.000"	"0.000693811189991125"	"17"	"0.0001889"	"0.0004263"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"1071.56641"	"2142.12554"	"2142.12888"	"-1.56"	"-0.00167"	"7/174"	"7"	"174"	"91466.2677612305"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"79.7021"	"26924"	"26924"	"26897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	"6.5"	""	"6.6"	""	"3.3"	""	"5.6"	"7.0"	""	"1304"	"43"	"38.000"	"31.000"	"0.00324524579406266"	"15"	"0.0001889"	"0.0006978"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"714.71344"	"2142.12577"	"2142.12888"	"-1.46"	"-0.00104"	"6/174"	"6"	"174"	"127685.235046387"	"HCD"	"MS2"	"51.30578"	"5.7"	"100.000"	"87.1469"	"30001"	"30001"	"29977"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"8.6"	""	"6.8"	""	"6.2"	""	"9.5"	"15.0"	""	"1304"	"16"	"38.000"	"31.000"	"1.73080282640805"	"14"	"0.0001308"	"0.0003136"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAmQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"714.71362"	"2142.12632"	"2142.12888"	"-1.20"	"-0.00086"	"17/174"	"17"	"174"	"2615151.4430542"	"HCD"	"MS2"	"51.32624"	"15.8"	"100.000"	"76.6840"	"25696"	"25696"	"25688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.9"	""	"28.2"	""	"24.6"	""	"26.2"	""	"24.6"	"26.7"	""	"1305"	"66"	"38.000"	"31.000"	"1.72814634044088E-05"	"24"	"0"	"8.501E-07"	"1.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.5429"	"0.0000"	"1"	"1"	"1"	"714.71368"	"2142.12650"	"2142.12888"	"-1.11"	"-0.00079"	"15/174"	"15"	"174"	"2023576.34234619"	"HCD"	"MS2"	"1.545997"	"15.9"	"100.000"	"79.7892"	"27010"	"27010"	"26991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.4"	""	"24.5"	""	"26.7"	""	"22.5"	""	"25.6"	"27.7"	""	"1304"	"35"	"38.000"	"31.000"	"0.0195996174931361"	"18"	"0"	"5.417E-06"	"1.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAmQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"714.71381"	"2142.12687"	"2142.12888"	"-0.94"	"-0.00067"	"17/174"	"17"	"174"	"2797782.99884033"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"76.6296"	"25724"	"25724"	"25714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.7"	""	"25.2"	""	"32.2"	""	"25.4"	"1.2"	"35.5"	"27.0"	""	"1313"	"69"	"38.000"	"31.000"	"7.80251712312403E-06"	"25"	"0"	"7.855E-07"	"1.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.5490"	"0.0000"	"1"	"1"	"1"	"714.71399"	"2142.12741"	"2142.12888"	"-0.69"	"-0.00049"	"15/174"	"15"	"174"	"1034701.36242676"	"HCD"	"MS2"	"47.20411"	"9.1"	"100.000"	"79.5477"	"26861"	"26861"	"26833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.9"	""	"10.2"	""	"17.9"	""	"13.0"	""	"14.5"	"18.1"	""	"1319"	"51"	"38.000"	"31.000"	"0.000551080190523508"	"18"	"0"	"2.254E-06"	"1.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.6216"	"0.0000"	"1"	"1"	"1"	"714.71429"	"2142.12833"	"2142.12888"	"-0.26"	"-0.00018"	"13/174"	"13"	"174"	"896673.556518555"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"79.4961"	"26891"	"26891"	"26863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.1"	""	"11.0"	""	"13.6"	""	"18.2"	""	"16.9"	"20.4"	""	"1314"	"37"	"38.000"	"31.000"	"0.0118185819123961"	"18"	"0"	"1.126E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAmQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"1071.56787"	"2142.12847"	"2142.12888"	"-0.20"	"-0.00021"	"8/174"	"8"	"174"	"163649.420043945"	"HCD"	"MS2"	"100"	"9.7"	"100.000"	"76.7823"	"25734"	"25734"	"25716"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.0"	""	"20.5"	""	"23.9"	""	"9.3"	""	"12.7"	"11.1"	""	"1312"	"42"	"38.000"	"31.000"	"0.00426485076865068"	"15"	"0.0004166"	"0.002155"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.6486"	"0.0000"	"1"	"1"	"1"	"714.71436"	"2142.12851"	"2142.12888"	"-0.17"	"-0.00012"	"13/174"	"13"	"174"	"2047647.43835449"	"HCD"	"MS2"	"0.9293759"	"15.3"	"100.000"	"79.8383"	"26979"	"26979"	"26961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.7"	""	"22.4"	""	"26.6"	""	"19.6"	""	"25.7"	"27.9"	""	"1312"	"37"	"38.000"	"31.000"	"0.0132100310790973"	"19"	"0"	"8.696E-06"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"714.71442"	"2142.12870"	"2142.12888"	"-0.09"	"-0.00006"	"10/174"	"10"	"174"	"151415.504577637"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"85.6861"	"29363"	"29363"	"29336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"11.3"	""	"9.5"	""	"8.3"	"1.9"	"9.7"	"8.1"	""	"1312"	"31"	"38.000"	"31.000"	"0.0559633674795539"	"22"	"0.0001308"	"0.000309"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAmQEFMILPVGASSFR.[E]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"1071.56812"	"2142.12895"	"2142.12888"	"0.03"	"0.00003"	"9/174"	"9"	"174"	"202082.704162598"	"HCD"	"MS2"	"100"	"11.9"	"100.000"	"76.7143"	"25757"	"25757"	"25740"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.9"	""	"25.1"	""	"27.1"	""	"11.4"	""	"17.2"	"16.4"	""	"1321"	"46"	"38.000"	"31.000"	"0.00162507280253951"	"15"	"0.0003146"	"0.001444"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAMQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.71497"	"2142.13034"	"2142.12888"	"0.68"	"0.00049"	"6/174"	"6"	"174"	"252301.458984375"	"HCD"	"MS2"	"12.80165"	"8.4"	"100.000"	"85.1002"	"29125"	"29125"	"29099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"12.5"	""	"13.9"	""	"13.3"	""	"16.0"	"16.7"	""	"1313"	"14"	"38.000"	"31.000"	"2.36175438529745"	"13"	"0.0001308"	"0.0002283"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RANNTTYGLAAGVFTK"	"[K].rANNTTYGLAAGVFTk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.73932"	"2142.20340"	"2142.20716"	"-1.75"	"-0.00125"	"6/170"	"6"	"170"	"1744639.97161865"	"HCD"	"MS2"	"0"	"107.0"	"100.000"	"42.0587"	"11662"	"11662"	"11634"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.8"	""	"154.5"	""	"157.9"	""	"154.9"	"1.1"	"205.2"	"195.6"	""	"943"	"16"	"36.000"	"29.000"	"1.30161245920789"	"13"	"0"	"0.0001737"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIVPQIK"	"[R].aLPFWNEEIVPQIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"4"	"4"	"0.3778"	"0.0000"	"1"	"1"	"1"	"536.31372"	"2142.23305"	"2142.23633"	"-1.53"	"-0.00082"	"9/122"	"9"	"122"	"2307040.4017334"	"HCD"	"MS2"	"6.410047"	"31.4"	"100.000"	"81.2414"	"27602"	"27602"	"27582"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.1"	""	"44.7"	""	"49.0"	""	"50.4"	""	"58.8"	"57.2"	""	"749"	"45"	"35.000"	"28.000"	"0.00131962891205412"	""	"0"	"2.765E-05"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIVPQIK"	"[R].aLPFWNEEIVPQIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"4"	"4"	"0.1957"	"0.0000"	"1"	"1"	"1"	"536.31409"	"2142.23452"	"2142.23633"	"-0.85"	"-0.00045"	"8/122"	"8"	"122"	"2235956.06536865"	"HCD"	"MS2"	"4.148505"	"33.2"	"100.000"	"81.2506"	"27555"	"27555"	"27536"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.0"	""	"38.3"	""	"51.6"	""	"55.0"	""	"58.9"	"61.0"	""	"743"	"46"	"35.000"	"28.000"	"0.00104462115849321"	""	"0"	"0.0001071"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIVPQIK"	"[R].aLPFWNEEIVPQIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"1071.62109"	"2142.23491"	"2142.23633"	"-0.66"	"-0.00071"	"13/122"	"13"	"122"	"304171.592529297"	"HCD"	"MS2"	"11.09778"	"17.3"	"100.000"	"81.1258"	"27555"	"27555"	"27534"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.5"	""	"22.2"	""	"26.5"	""	"27.5"	"2.3"	"30.2"	"29.4"	""	"735"	"51"	"35.000"	"28.000"	"0.000263182703253241"	"20"	"0.0001308"	"0.0002648"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIVPQIK"	"[R].aLPFWNEEIVPQIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"1071.62109"	"2142.23491"	"2142.23633"	"-0.66"	"-0.00071"	"10/122"	"10"	"122"	"371498.515380859"	"HCD"	"MS2"	"20.8421"	"20.0"	"100.000"	"81.1356"	"27508"	"27508"	"27488"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.6"	""	"31.1"	""	"26.3"	""	"27.3"	""	"30.4"	"41.0"	""	"735"	"28"	"35.000"	"28.000"	"0.0587837575515891"	"19"	"0.0004166"	"0.002458"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIVPQIK"	"[R].aLPFWNEEIVPQIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"5"	"1071.62134"	"2142.23540"	"2142.23633"	"-0.44"	"-0.00047"	"5/122"	"5"	"122"	"104014.20300293"	"HCD"	"MS2"	"24.9957"	"7.5"	"100.000"	"81.4466"	"27686"	"27686"	"27662"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"10.5"	""	"12.5"	""	"13.5"	""	"12.4"	"14.9"	""	"732"	"6"	"35.000"	"28.000"	"9.51658400118489"	"16"	"0.00162"	"0.02194"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIVPQIK"	"[R].aLPFWNEEIVPQIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"714.75018"	"2142.23600"	"2142.23633"	"-0.16"	"-0.00011"	"16/122"	"16"	"122"	"6084487.24908447"	"HCD"	"MS2"	"3.417052"	"119.0"	"100.000"	"81.3498"	"27647"	"27647"	"27630"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.8"	""	"148.1"	""	"176.0"	""	"192.2"	""	"228.2"	"223.1"	""	"740"	"42"	"35.000"	"28.000"	"0.00242773748532075"	""	"0"	"2.447E-05"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIVPQIK"	"[R].aLPFWNEEIVPQIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.3095"	"0.0000"	"1"	"1"	"1"	"714.75061"	"2142.23728"	"2142.23633"	"0.44"	"0.00031"	"8/122"	"8"	"122"	"2453451.53009033"	"HCD"	"MS2"	"7.030111"	"56.4"	"100.000"	"81.0522"	"27474"	"27474"	"27456"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.4"	""	"79.8"	""	"86.3"	""	"94.4"	""	"92.0"	"96.4"	""	"737"	"42"	"35.000"	"28.000"	"0.0021849298210773"	""	"0"	"2.045E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIVPQIK"	"[R].aLPFWNEEIVPQIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.4773"	"0.0000"	"1"	"1"	"1"	"714.75073"	"2142.23764"	"2142.23633"	"0.61"	"0.00044"	"9/122"	"9"	"122"	"2441755.18725586"	"HCD"	"MS2"	"8.430924"	"55.9"	"100.000"	"81.0402"	"27520"	"27520"	"27502"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.9"	""	"75.5"	""	"72.0"	""	"94.2"	""	"104.5"	"101.2"	""	"736"	"44"	"35.000"	"28.000"	"0.0013453888331363"	""	"0"	"2.726E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALPFWNEEIVPQIK"	"[R].aLPFWNEEIVPQIk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.1538"	"0.0000"	"1"	"1"	"1"	"714.75079"	"2142.23783"	"2142.23633"	"0.70"	"0.00050"	"8/122"	"8"	"122"	"5481883.97711182"	"HCD"	"MS2"	"4.189685"	"110.8"	"100.000"	"81.3615"	"27601"	"27601"	"27584"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.3"	""	"130.4"	""	"159.0"	""	"186.5"	""	"193.4"	"226.3"	""	"734"	"39"	"35.000"	"28.000"	"0.00418471672034949"	""	"0"	"6.126E-05"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPDPYVSVLLLPDK"	"[R].dLPDPYVSVLLLPDk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.1765"	"0.0000"	"1"	"1"	"1"	"1071.62476"	"2142.24224"	"2142.24623"	"-1.86"	"-0.00200"	"4/138"	"4"	"138"	"76398.9624633789"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"83.3090"	"28395"	"28395"	"28366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"3.2"	""	"6.0"	""	"6.6"	""	"6.3"	"7.5"	""	"693"	"17"	"35.000"	"28.000"	"0.645213192853683"	"27"	"0.001422"	"0.01951"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPDPYVSVLLLPDK"	"[R].dLPDPYVSVLLLPDk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.75256"	"2142.24314"	"2142.24623"	"-1.44"	"-0.00103"	"7/138"	"7"	"138"	"963477.347351074"	"HCD"	"MS2"	"35.75117"	"24.0"	"100.000"	"83.5089"	"28527"	"28527"	"28507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.4"	""	"25.3"	""	"35.2"	""	"41.2"	""	"47.6"	"43.3"	""	"690"	"4"	"35.000"	"28.000"	"14.2173644088579"	"13"	"0.0005564"	"0.003299"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPDPYVSVLLLPDK"	"[R].dLPDPYVSVLLLPDk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"1071.62573"	"2142.24419"	"2142.24623"	"-0.95"	"-0.00102"	"4/138"	"4"	"138"	"65604.3403320313"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"83.3313"	"28455"	"28455"	"28429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.8"	""	"3.0"	""	"3.6"	""	"8.4"	""	"9.0"	"6.8"	""	"678"	"18"	"35.000"	"28.000"	"0.586407745773919"	"26"	"0.00103"	"0.0124"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPDPYVSVLLLPDK"	"[R].dLPDPYVSVLLLPDk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"714.75330"	"2142.24533"	"2142.24623"	"-0.42"	"-0.00030"	"12/138"	"12"	"138"	"1672331.375"	"HCD"	"MS2"	"30.17554"	"36.3"	"100.000"	"83.2096"	"28405"	"28405"	"28381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.3"	""	"30.7"	""	"38.9"	""	"70.2"	""	"84.2"	"78.7"	""	"659"	"34"	"35.000"	"28.000"	"0.0136727357048023"	"16"	"0"	"1.934E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPDPYVSVLLLPDK"	"[R].dLPDPYVSVLLLPDk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.75336"	"2142.24552"	"2142.24623"	"-0.33"	"-0.00024"	"14/138"	"14"	"138"	"1703964.27130127"	"HCD"	"MS2"	"28.16646"	"36.7"	"100.000"	"83.1826"	"28343"	"28343"	"28319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.6"	""	"39.6"	""	"43.5"	""	"72.5"	""	"78.2"	"78.4"	""	"659"	"31"	"35.000"	"28.000"	"0.029164559343926"	"15"	"0"	"1.227E-05"	"1.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDFATVYVDAVK"	"[R].vkDFATVYVDAVk.[D]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.76385"	"2142.27701"	"2142.27775"	"-0.35"	"-0.00025"	"9/132"	"9"	"132"	"7912170.31036377"	"HCD"	"MS2"	"0"	"270.3"	"95.520"	"57.5871"	"17918"	"17918"	"17899"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"289.0"	""	"369.5"	""	"317.0"	""	"435.6"	""	"570.4"	"592.0"	""	"463"	"22"	"33.000"	"26.000"	"0.157235640950878"	"14"	"0"	"1.07E-05"	"1.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDFATVYVDAVK"	"[R].vkDFATVYVDAVk.[D]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"1"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"714.76416"	"2142.27793"	"2142.27775"	"0.08"	"0.00006"	"9/132"	"9"	"132"	"16774215.6240845"	"HCD"	"MS2"	"0.3536086"	"380.5"	"72.741"	"57.6688"	"18006"	"18006"	"17989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"406.7"	""	"488.3"	""	"426.9"	""	"680.1"	""	"764.0"	"855.1"	""	"461"	"16"	"33.000"	"26.000"	"0.640723908218515"	"14"	"0"	"7.181E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEVIDAITTTAQSHQR"	"[R].iMEVIDAITTTAQSHQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"715.05072"	"2143.13761"	"2143.13787"	"-0.12"	"-0.00009"	"19/158"	"19"	"158"	"1186613.82263184"	"HCD"	"MS2"	"25.21426"	"26.1"	"100.000"	"76.1469"	"25480"	"25480"	"25457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.8"	""	"31.1"	""	"36.9"	""	"39.4"	"1.4"	"53.9"	"51.5"	""	"1305"	"45"	"38.000"	"31.000"	"0.00202106609273882"	"16"	"0"	"3.839E-06"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMEVIDAITTTAQSHQR"	"[R].iMEVIDAITTTAQSHQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"715.05090"	"2143.13816"	"2143.13787"	"0.13"	"0.00010"	"16/158"	"16"	"158"	"1104304.40979004"	"HCD"	"MS2"	"13.17673"	"24.5"	"100.000"	"76.1741"	"25542"	"25542"	"25519"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.8"	""	"29.9"	""	"26.5"	""	"38.9"	""	"56.4"	"53.2"	""	"1320"	"52"	"38.000"	"31.000"	"0.000384188123728775"	"18"	"0"	"2.258E-06"	"1.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGIGGLDKEFSDIFR"	"[K].mGIGGLDkEFSDIFR.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"715.05634"	"2143.15445"	"2143.16218"	"-3.61"	"-0.00258"	"12/136"	"12"	"136"	"808646.374816895"	"HCD"	"MS2"	"30.70393"	"54.8"	"100.000"	"72.5457"	"24015"	"24015"	"23985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.8"	""	"80.9"	""	"76.3"	""	"69.1"	"1.7"	"94.9"	"95.0"	""	"1292"	"14"	"38.000"	"31.000"	"2.78120190377645"	"13"	"0.0001308"	"0.0002275"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RANNTTYGLAAGVFTK"	"[K].rANnTTYGLAAGVFTk.[D]"	"N-Term(TMT6plex); N4(Deamidated); K16(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"1"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"715.07397"	"2143.20737"	"2143.19117"	"7.56"	"0.00540"	"14/170"	"14"	"170"	"1366423.79309082"	"HCD"	"MS2"	"56.59591"	"93.3"	"100.000"	"42.0816"	"11671"	"11671"	"11649"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.9"	""	"130.9"	""	"137.8"	""	"135.9"	"1.4"	"171.2"	"174.2"	""	"974"	"14"	"36.000"	"29.000"	"2.09666459309463"	"15"	"0.0006037"	"0.00409"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RANNTTYGLAAGVFTK"	"[K].rAnNTTYGLAAGVFTk.[D]"	"N-Term(TMT6plex); N3(Deamidated); K16(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"1"	"3"	"3"	"0.8571"	"0.0000"	"1"	"2"	"2"	"715.07397"	"2143.20737"	"2143.19117"	"7.56"	"0.00540"	"6/170"	"6"	"170"	"1366423.79309082"	"HCD"	"MS2"	"56.59591"	"93.3"	"100.000"	"42.0816"	"11671"	"11671"	"11649"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.9"	""	"130.9"	""	"137.8"	""	"135.9"	"1.4"	"171.2"	"174.2"	""	"974"	"14"	"36.000"	"29.000"	"2.10149790415122"	"15"	"0.0003839"	"0.001636"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALSGHLETVMLGLLK"	"[K].sALSGHLETVmLGLLk.[T]"	"N-Term(TMT6plex); M11(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.56830"	"2143.25136"	"2143.25608"	"-2.20"	"-0.00118"	"12/136"	"12"	"136"	"5311142.30291748"	"HCD"	"MS2"	"5.493473"	"101.8"	"100.000"	"57.4812"	"17875"	"17875"	"17851"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.7"	""	"106.0"	""	"106.3"	""	"224.0"	""	"215.4"	"229.8"	""	"670"	"7"	"35.000"	"28.000"	"7.01527672710049"	"13"	"0"	"0.0001721"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALSGHLETVMLGLLK"	"[K].sALSGHLETVmLGLLk.[T]"	"N-Term(TMT6plex); M11(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"715.09155"	"2143.26010"	"2143.25608"	"1.88"	"0.00134"	"8/136"	"8"	"136"	"11312334.9044189"	"HCD"	"MS2"	"0"	"303.5"	"100.000"	"57.3889"	"17837"	"17837"	"17819"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.5"	""	"305.5"	""	"283.0"	""	"739.0"	""	"634.6"	"654.8"	""	"616"	"28"	"34.000"	"27.000"	"0.04431499621028"	"14"	"0"	"2.726E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALSGHLETVMLGLLK"	"[K].sALSGHLETVmLGLLk.[T]"	"N-Term(TMT6plex); M11(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"715.09296"	"2143.26432"	"2143.25608"	"3.84"	"0.00274"	"8/136"	"8"	"136"	"13146412.0990601"	"HCD"	"MS2"	"0"	"358.7"	"100.000"	"57.5949"	"17975"	"17975"	"17957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"304.3"	""	"391.6"	""	"362.4"	""	"865.9"	""	"739.3"	"753.1"	""	"602"	"31"	"34.000"	"27.000"	"0.0226760024683849"	"14"	"0"	"2.938E-05"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSVPFETIQALDVVMR"	"[R].lPSVPFETIQALDVVMR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"715.40472"	"2144.19962"	"2144.19868"	"0.44"	"0.00031"	"5/162"	"5"	"162"	"77434.8248901367"	"HCD"	"MS2"	"13.87406"	"2.1"	"100.000"	"94.9926"	"32748"	"32748"	"32740"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.3"	""	"4.1"	""	"2.8"	""	"3.0"	""	"2.4"	"4.9"	""	"1092"	"10"	"37.000"	"30.000"	"5.34801532033149"	"18"	"0.001454"	"0.02006"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSVPFETIQALDVVMR"	"[R].lPSVPFETIQALDVVMR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"715.40472"	"2144.19962"	"2144.19868"	"0.44"	"0.00031"	"7/162"	"7"	"162"	"102106.30090332"	"HCD"	"MS2"	"9.10917"	"2.1"	"100.000"	"94.8645"	"32692"	"32692"	"32686"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"5.6"	""	"5.4"	""	"3.5"	"5.7"	""	"1092"	"23"	"37.000"	"30.000"	"0.248423480841926"	"19"	"0.0003839"	"0.002104"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILGLMMPPAHYDAK"	"[R].lILGLMmPPAHYDAk.[Q]"	"N-Term(TMT6plex); M7(Oxidation); K15(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"4"	"4"	"0.1739"	"0.0000"	"1"	"1"	"1"	"536.80554"	"2144.20034"	"2144.20121"	"-0.41"	"-0.00022"	"12/112"	"12"	"112"	"2216788.58514404"	"HCD"	"MS2"	"10.417"	"44.9"	"100.000"	"62.2868"	"19887"	"19887"	"19859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.8"	""	"66.2"	""	"78.0"	""	"81.5"	"1.0"	"67.9"	"67.6"	""	"1087"	"46"	"37.000"	"30.000"	"0.00132495017978342"	"15"	"0"	"2.504E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILGLMMPPAHYDAK"	"[R].lILGLMmPPAHYDAk.[Q]"	"N-Term(TMT6plex); M7(Oxidation); K15(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.1538"	"0.0000"	"1"	"1"	"1"	"715.40515"	"2144.20090"	"2144.20121"	"-0.14"	"-0.00010"	"15/112"	"15"	"112"	"2746309.37249756"	"HCD"	"MS2"	"16.90365"	"110.2"	"100.000"	"62.2385"	"19867"	"19867"	"19843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"143.0"	""	"164.5"	""	"209.2"	""	"213.7"	""	"168.2"	"143.5"	""	"1088"	"52"	"37.000"	"30.000"	"0.000350428080440257"	"17"	"0"	"1.671E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILGLMMPPAHYDAK"	"[R].lILGLMmPPAHYDAk.[Q]"	"N-Term(TMT6plex); M7(Oxidation); K15(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.1538"	"0.0000"	"1"	"1"	"1"	"715.40576"	"2144.20273"	"2144.20121"	"0.71"	"0.00051"	"15/112"	"15"	"112"	"2385828.46081543"	"HCD"	"MS2"	"8.626919"	"102.4"	"100.000"	"62.0951"	"19755"	"19755"	"19737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.7"	""	"156.9"	""	"195.6"	""	"191.4"	"4.5"	"140.3"	"135.5"	""	"1076"	"65"	"37.000"	"30.000"	"1.65113382975445E-05"	"17"	"0"	"5.964E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILGLMMPPAHYDAK"	"[R].lILGLMmPPAHYDAk.[Q]"	"N-Term(TMT6plex); M7(Oxidation); K15(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"4"	"4"	"0.1875"	"0.0000"	"1"	"1"	"1"	"536.80615"	"2144.20278"	"2144.20121"	"0.73"	"0.00039"	"12/112"	"12"	"112"	"2025421.31756592"	"HCD"	"MS2"	"9.485909"	"39.0"	"100.000"	"62.1643"	"19784"	"19784"	"19753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.3"	""	"63.4"	""	"68.9"	""	"71.1"	"1.6"	"56.3"	"55.5"	""	"1069"	"48"	"37.000"	"30.000"	"0.000887049202025378"	"15"	"0"	"1.085E-05"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGADAVGMSTVPEVIVAR"	"[R].mLGADAVGMSTVPEVIVAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1073.08167"	"2145.15605"	"2145.16091"	"-2.26"	"-0.00243"	"14/162"	"14"	"162"	"642024.568908691"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"70.0000"	"22975"	"22975"	"22953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.8"	""	"44.5"	"1.7"	"46.6"	""	"27.2"	""	"58.0"	"49.7"	""	"1325"	"60"	"38.000"	"31.000"	"7.38220128504521E-05"	"16"	"0"	"1.434E-06"	"1.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGADAVGMSTVPEVIVAR"	"[R].mLGADAVGMSTVPEVIVAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"715.72424"	"2145.15818"	"2145.16091"	"-1.28"	"-0.00091"	"19/162"	"19"	"162"	"6191609.47216797"	"HCD"	"MS2"	"15.46406"	"64.9"	"100.000"	"69.8072"	"22948"	"22948"	"22929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.5"	""	"102.6"	""	"101.9"	""	"72.2"	""	"129.1"	"118.7"	""	"1307"	"64"	"38.000"	"31.000"	"2.84607009453519E-05"	"16"	"0"	"4.1E-07"	"1.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGADAVGMSTVPEVIVAR"	"[R].mLGADAVGMSTVPEVIVAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1073.08289"	"2145.15849"	"2145.16091"	"-1.13"	"-0.00121"	"19/162"	"19"	"162"	"430913.862854004"	"HCD"	"MS2"	"100"	"19.8"	"100.000"	"69.9520"	"23007"	"23007"	"22986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.9"	""	"32.8"	""	"38.5"	""	"17.2"	""	"37.4"	"32.8"	""	"1308"	"41"	"38.000"	"31.000"	"0.00492694538681852"	"15"	"0"	"2.868E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGADAVGMSTVPEVIVAR"	"[R].mLGADAVGMSTVPEVIVAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9403"	"0.0000"	"1"	"1"	"1"	"715.72479"	"2145.15982"	"2145.16091"	"-0.51"	"-0.00036"	"20/162"	"20"	"162"	"6392781.24108887"	"HCD"	"MS2"	"16.88018"	"69.4"	"100.000"	"69.9518"	"22955"	"22955"	"22937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.1"	""	"112.3"	""	"104.5"	""	"81.3"	"0.3"	"134.0"	"116.3"	""	"1320"	"67"	"38.000"	"31.000"	"1.22051728852553E-05"	"20"	"0"	"1.339E-06"	"1.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDTITWTWQGPGALK"	"[K].lDTITWTWQGPGALk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"715.74158"	"2145.21018"	"2145.21085"	"-0.31"	"-0.00022"	"13/134"	"13"	"134"	"327173.622680664"	"HCD"	"MS2"	"4.585448"	"16.0"	"100.000"	"78.8234"	"26565"	"26565"	"26545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.5"	""	"18.0"	""	"25.3"	""	"27.8"	""	"29.7"	"34.1"	""	"1057"	"46"	"37.000"	"30.000"	"0.00134910263845647"	"20"	"0"	"4.667E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDTITWTWQGPGALK"	"[K].lDTITWTWQGPGALk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"3"	"3"	"0.4737"	"0.0000"	"1"	"1"	"1"	"715.74219"	"2145.21201"	"2145.21085"	"0.54"	"0.00039"	"11/134"	"11"	"134"	"242260.456420898"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"78.8752"	"26638"	"26638"	"26607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.6"	""	"21.7"	""	"22.3"	""	"25.7"	""	"29.8"	"24.9"	""	"1050"	"19"	"37.000"	"30.000"	"0.619668333717158"	"23"	"0"	"0.0001795"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYNFLPEFLTSTQK"	"[K].tYNFLPEFLTSTQk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"716.39783"	"2147.17893"	"2147.17888"	"0.02"	"0.00002"	"14/148"	"14"	"148"	"597431.55847168"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"76.8749"	"25821"	"25821"	"25799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.0"	""	"32.3"	""	"34.9"	""	"46.8"	""	"38.7"	"37.1"	""	"1262"	"30"	"38.000"	"31.000"	"0.0606777347660092"	"15"	"0"	"0.000129"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYNFLPEFLTSTQK"	"[K].tYNFLPEFLTSTQk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"716.39880"	"2147.18186"	"2147.17888"	"1.39"	"0.00099"	"11/148"	"11"	"148"	"700980.719238281"	"HCD"	"MS2"	"24.52755"	"27.7"	"100.000"	"76.8925"	"25777"	"25777"	"25761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.1"	""	"35.5"	""	"36.6"	""	"52.7"	"1.6"	"51.6"	"44.7"	""	"1242"	"40"	"37.000"	"30.000"	"0.00680912959804918"	"18"	"0"	"0.0001599"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFMSPLLAPDVMLK"	"[K].nPFmSPLLAPDVMLk.[T]"	"N-Term(TMT6plex); M4(Oxidation); K15(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"3"	"3"	"0.1875"	"0.0000"	"1"	"1"	"1"	"716.40424"	"2147.19815"	"2147.20088"	"-1.27"	"-0.00091"	"9/152"	"9"	"152"	"309385.884399414"	"HCD"	"MS2"	"26.65704"	"14.8"	"100.000"	"79.3583"	"26784"	"26784"	"26753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.1"	""	"22.4"	""	"22.2"	""	"19.5"	""	"26.1"	"26.4"	""	"1180"	"16"	"37.000"	"30.000"	"1.5447279748492"	"27"	"0.0003839"	"0.002033"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFMSPLLAPDVMLK"	"[K].nPFMSPLLAPDVmLk.[T]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"716.40460"	"2147.19925"	"2147.20088"	"-0.76"	"-0.00054"	"8/152"	"8"	"152"	"248958.564819336"	"HCD"	"MS2"	"54.06653"	"14.9"	"100.000"	"78.2184"	"26319"	"26319"	"26289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.5"	""	"18.0"	""	"22.5"	""	"19.9"	""	"28.7"	"30.4"	""	"1177"	"17"	"37.000"	"30.000"	"1.11364421957257"	"16"	"0.0008125"	"0.007872"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVELPLTHFELYK"	"[R].eAVELPLTHFELYk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"716.41016"	"2147.21592"	"2147.21526"	"0.30"	"0.00022"	"15/124"	"15"	"124"	"2994820.30889893"	"HCD"	"MS2"	"37.04841"	"119.3"	"100.000"	"65.3557"	"21087"	"21087"	"21065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.3"	""	"151.5"	""	"155.3"	""	"183.9"	""	"234.8"	"242.3"	""	"1091"	"43"	"37.000"	"30.000"	"0.00268407566714231"	"16"	"0"	"2.117E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVELPLTHFELYK"	"[R].eAVELPLTHFELYk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"716.41028"	"2147.21628"	"2147.21526"	"0.47"	"0.00034"	"15/124"	"15"	"124"	"2838917.86621094"	"HCD"	"MS2"	"28.99284"	"112.8"	"100.000"	"65.3546"	"21140"	"21140"	"21123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.5"	""	"130.8"	""	"141.9"	""	"197.2"	""	"217.9"	"222.3"	""	"1087"	"47"	"37.000"	"30.000"	"0.00103323604513831"	"18"	"0"	"1.992E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTYIPVPVVTELQSGK"	"[K].gTYIPVPVVTELqSGk.[W]"	"N-Term(TMT6plex); Q13(Deamidated); K16(TMT6plex)"	"1"	"1"	"O08619"	"Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3"	"O08619"	"Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"716.42316"	"2147.25492"	"2147.23639"	"8.63"	"0.00617"	"5/150"	"5"	"150"	"1019820.41723633"	"HCD"	"MS2"	"41.6249"	"41.8"	"100.000"	"67.1503"	"21819"	"21819"	"21798"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.3"	""	"61.3"	""	"51.8"	""	"66.7"	"1.1"	"82.2"	"84.3"	""	"738"	"22"	"35.000"	"28.000"	"0.259433686037134"	"15"	"0.0001889"	"0.0008136"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPTELLIEMEDWK"	"[R].iGPTELLIEmEDWk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.72681"	"2148.16587"	"2148.16626"	"-0.19"	"-0.00013"	"14/120"	"14"	"120"	"878374.167785645"	"HCD"	"MS2"	"34.15101"	"44.8"	"100.000"	"74.6122"	"24910"	"24910"	"24879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.4"	""	"59.2"	""	"49.1"	""	"94.3"	""	"89.4"	"75.6"	""	"1242"	"21"	"37.000"	"30.000"	"0.469993227808025"	"14"	"0"	"8.249E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGPTELLIEMEDWK"	"[R].iGPTELLIEmEDWk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K14(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"716.72699"	"2148.16642"	"2148.16626"	"0.07"	"0.00005"	"16/120"	"16"	"120"	"1031492.96057129"	"HCD"	"MS2"	"31.80004"	"51.6"	"100.000"	"74.5273"	"24823"	"24823"	"24801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.7"	""	"73.1"	""	"59.3"	""	"108.9"	""	"105.8"	"83.4"	""	"1228"	"23"	"37.000"	"30.000"	"0.283901947139146"	"22"	"0"	"6.672E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYNFLPEFLTSTQK"	"[K].tYnFLPEFLTSTQk.[M]"	"N-Term(TMT6plex); N3(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"0.4583"	"0.0000"	"1"	"1"	"1"	"716.73132"	"2148.17942"	"2148.16289"	"7.69"	"0.00551"	"12/148"	"12"	"148"	"935670.032592773"	"HCD"	"MS2"	"37.7281"	"32.9"	"100.000"	"76.7938"	"25738"	"25738"	"25724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.4"	""	"40.6"	""	"40.1"	""	"63.1"	"0.1"	"60.4"	"62.6"	""	"1237"	"24"	"37.000"	"30.000"	"0.269364093874524"	"27"	"0.0004166"	"0.0022"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFPLNDLLSATELDK"	"[K].dFPLNDLLSATELDk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"717.06421"	"2149.17807"	"2149.17927"	"-0.56"	"-0.00040"	"16/158"	"16"	"158"	"1044476.20202637"	"HCD"	"MS2"	"1.991781"	"33.7"	"100.000"	"85.1694"	"29153"	"29153"	"29131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.2"	""	"27.0"	""	"31.6"	""	"70.1"	"0.1"	"77.7"	"79.6"	""	"1278"	"48"	"38.000"	"31.000"	"0.00098514658943477"	"16"	"0"	"8.431E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFPLNDLLSATELDK"	"[K].dFPLNDLLSATELDk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"717.06427"	"2149.17826"	"2149.17927"	"-0.47"	"-0.00034"	"13/158"	"13"	"158"	"649129.02166748"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"85.4627"	"29272"	"29272"	"29254"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.8"	""	"20.0"	""	"22.3"	""	"46.4"	""	"58.0"	"50.0"	""	"1280"	"29"	"38.000"	"31.000"	"0.0904024028558562"	"16"	"0"	"2.242E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFPLNDLLSATELDK"	"[K].dFPLNDLLSATELDk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1075.09302"	"2149.17876"	"2149.17927"	"-0.24"	"-0.00026"	"6/158"	"6"	"158"	"105405.340148926"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"85.2941"	"29204"	"29204"	"29179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.3"	""	"8.3"	""	"6.3"	""	"18.5"	""	"20.6"	"16.4"	""	"1275"	"8"	"38.000"	"31.000"	"11.2844446092736"	"13"	"0.001966"	"0.02917"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFPLNDLLSATELDK"	"[K].dFPLNDLLSATELDk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1075.09302"	"2149.17876"	"2149.17927"	"-0.24"	"-0.00026"	"7/158"	"7"	"158"	"112940.831481934"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"85.3577"	"29281"	"29281"	"29250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.7"	""	"6.3"	""	"8.5"	""	"14.5"	""	"11.8"	"13.8"	""	"1275"	"9"	"38.000"	"31.000"	"8.69921749575441"	"13"	"0.0006037"	"0.005087"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFPLNDLLSATELDK"	"[K].dFPLNDLLSATELDk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9828"	"0.0000"	"1"	"1"	"1"	"717.06458"	"2149.17917"	"2149.17927"	"-0.05"	"-0.00003"	"15/158"	"15"	"158"	"1498135.0557251"	"HCD"	"MS2"	"1.069713"	"43.6"	"100.000"	"85.2886"	"29252"	"29252"	"29234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.6"	""	"41.7"	""	"38.8"	""	"85.3"	""	"106.2"	"100.3"	""	"1278"	"58"	"38.000"	"31.000"	"9.91975299363214E-05"	"18"	"0"	"9.173E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSEIEYYAMLAK"	"[R].kSEIEYYAmLAk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"717.07617"	"2149.21396"	"2149.21819"	"-1.97"	"-0.00141"	"12/116"	"12"	"116"	"2325407.77178955"	"HCD"	"MS2"	"51.91289"	"140.3"	"100.000"	"51.3181"	"15377"	"15377"	"15346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.6"	""	"187.4"	""	"201.3"	""	"219.9"	"0.7"	"264.5"	"259.9"	""	"1066"	"9"	"37.000"	"30.000"	"7.28999464042587"	"13"	"0.0005564"	"0.003404"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLSQTSPLCALEELASK"	"[R].ALLSqTSPLcALEELASk.[T]"	"Q5(Deamidated); C10(Methylthio); K18(TMT6plex)"	"1"	"1"	"Q1XID0"	"Transcription factor LBX1 OS=Rattus norvegicus OX=10116 GN=Lbx1 PE=2 SV=1"	"Q1XID0"	"Transcription factor LBX1 OS=Rattus norvegicus OX=10116 GN=Lbx1 PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"717.37604"	"2150.11356"	"2150.12861"	"-7.00"	"-0.00502"	"3/188"	"3"	"188"	"92324.7608032227"	"HCD"	"MS2"	"9.68047"	"3.6"	"100.000"	"98.3552"	"33711"	"33711"	"33702"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"5.1"	""	"5.9"	""	"7.1"	""	"3.7"	"9.0"	""	"1240"	"2"	"37.000"	"30.000"	"37.1870467278416"	"14"	"0.002651"	"0.03948"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"1075.59851"	"2150.18974"	"2150.19315"	"-1.58"	"-0.00170"	"12/144"	"12"	"144"	"321392.541442871"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"75.0412"	"25085"	"25085"	"25055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.0"	""	"23.1"	""	"22.6"	""	"31.7"	""	"43.4"	"49.7"	""	"1154"	"30"	"37.000"	"30.000"	"0.0538487731559864"	"16"	"0.0001889"	"0.001058"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"1075.59863"	"2150.18999"	"2150.19315"	"-1.47"	"-0.00158"	"9/144"	"9"	"144"	"151859.854919434"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"74.9746"	"25006"	"25006"	"24977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.8"	""	"11.9"	""	"14.1"	""	"14.1"	""	"23.9"	"24.0"	""	"1159"	"26"	"37.000"	"30.000"	"0.162574879319302"	"15"	"0.0003839"	"0.001728"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"717.40179"	"2150.19083"	"2150.19315"	"-1.08"	"-0.00077"	"14/144"	"14"	"144"	"3280146.1942749"	"HCD"	"MS2"	"11.50036"	"81.0"	"100.000"	"74.9401"	"25043"	"25043"	"25023"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.7"	""	"99.6"	""	"114.5"	""	"99.2"	"1.8"	"164.6"	"152.4"	""	"1169"	"48"	"37.000"	"30.000"	"0.000972264694141365"	"18"	"0"	"7.759E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"1075.59949"	"2150.19170"	"2150.19315"	"-0.67"	"-0.00072"	"7/144"	"7"	"144"	"106288.981872559"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"75.6619"	"25338"	"25338"	"25311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.4"	""	"7.0"	""	"10.1"	""	"7.9"	""	"10.4"	"12.7"	""	"1173"	"16"	"37.000"	"30.000"	"1.56411260674185"	"14"	"0.0004166"	"0.002462"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"4"	"4"	"0.9355"	"0.0000"	"1"	"1"	"1"	"538.30341"	"2150.19179"	"2150.19315"	"-0.63"	"-0.00034"	"13/144"	"13"	"144"	"1396476.41436768"	"HCD"	"MS2"	"4.597207"	"28.8"	"100.000"	"75.3188"	"25146"	"25146"	"25121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.6"	""	"36.9"	""	"40.7"	""	"33.4"	""	"64.4"	"52.2"	""	"1173"	"31"	"37.000"	"30.000"	"0.0486707475147209"	"17"	"0.0002277"	"0.001345"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"1075.59961"	"2150.19194"	"2150.19315"	"-0.56"	"-0.00060"	"15/144"	"15"	"144"	"1102569.6237793"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"75.3325"	"25203"	"25203"	"25183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.2"	""	"71.7"	""	"87.1"	""	"71.2"	""	"130.5"	"135.5"	""	"1173"	"56"	"37.000"	"30.000"	"0.000150406988741764"	"18"	"0.0001889"	"0.0004545"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"4"	"4"	"0.9048"	"0.0000"	"1"	"1"	"1"	"538.30347"	"2150.19204"	"2150.19315"	"-0.52"	"-0.00028"	"13/144"	"13"	"144"	"1563120.21087646"	"HCD"	"MS2"	"20.98646"	"28.7"	"100.000"	"75.3460"	"25209"	"25209"	"25183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.9"	""	"32.3"	""	"35.1"	""	"36.6"	""	"62.0"	"61.4"	""	"1171"	"42"	"37.000"	"30.000"	"0.00371986260599196"	"19"	"0.0001859"	"0.0003319"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"717.40222"	"2150.19211"	"2150.19315"	"-0.48"	"-0.00035"	"16/144"	"16"	"144"	"7146216.28179932"	"HCD"	"MS2"	"0"	"145.2"	"91.047"	"75.5581"	"25296"	"25296"	"25279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"242.1"	""	"175.8"	""	"189.1"	""	"155.8"	""	"324.0"	"291.8"	""	"1171"	"60"	"37.000"	"30.000"	"5.41410780840829E-05"	"20"	"0"	"1.233E-05"	"1.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"1075.59985"	"2150.19243"	"2150.19315"	"-0.33"	"-0.00036"	"13/144"	"13"	"144"	"978997.610839844"	"HCD"	"MS2"	"0"	"61.4"	"100.000"	"75.2633"	"25123"	"25123"	"25105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.3"	""	"71.1"	""	"82.5"	""	"74.4"	""	"126.2"	"126.2"	""	"1160"	"50"	"37.000"	"30.000"	"0.000617202950570104"	"17"	"0.0001859"	"0.0003236"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"717.40259"	"2150.19321"	"2150.19315"	"0.03"	"0.00002"	"14/144"	"14"	"144"	"2349068.60705566"	"HCD"	"MS2"	"15.15355"	"63.2"	"100.000"	"74.9217"	"24984"	"24984"	"24961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.2"	""	"76.5"	""	"89.6"	""	"75.3"	""	"127.2"	"115.3"	""	"1162"	"48"	"37.000"	"30.000"	"0.00099810477293856"	"19"	"0"	"2.122E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"1075.60046"	"2150.19365"	"2150.19315"	"0.23"	"0.00025"	"11/144"	"11"	"144"	"289375.240356445"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"75.5865"	"25255"	"25255"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.4"	""	"23.6"	""	"25.3"	""	"19.5"	""	"39.7"	"44.0"	""	"1158"	"27"	"37.000"	"30.000"	"0.110580503670985"	"15"	"0.0001889"	"0.0009745"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"717.40277"	"2150.19376"	"2150.19315"	"0.28"	"0.00020"	"10/144"	"10"	"144"	"363407.611083984"	"HCD"	"MS2"	"14.30788"	"19.6"	"100.000"	"76.0782"	"25456"	"25456"	"25425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.8"	""	"21.7"	""	"28.2"	""	"25.7"	""	"39.3"	"39.3"	""	"1159"	"25"	"37.000"	"30.000"	"0.196360188482668"	"17"	"0.0001308"	"0.00029"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"717.40289"	"2150.19413"	"2150.19315"	"0.46"	"0.00033"	"18/144"	"18"	"144"	"21734473.284668"	"HCD"	"MS2"	"0.4999064"	"215.4"	"44.365"	"75.2445"	"25168"	"25168"	"25151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"387.8"	""	"252.2"	""	"291.5"	""	"244.7"	""	"433.0"	"439.5"	""	"1154"	"60"	"37.000"	"30.000"	"5.94532791494813E-05"	"26"	"0"	"1.404E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.9028"	"0.0000"	"1"	"1"	"1"	"717.40295"	"2150.19431"	"2150.19315"	"0.54"	"0.00039"	"18/144"	"18"	"144"	"12501815.9688721"	"HCD"	"MS2"	"0.1365307"	"230.4"	"79.829"	"75.5333"	"25234"	"25234"	"25217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"396.6"	""	"269.4"	""	"302.0"	""	"256.9"	""	"492.5"	"474.0"	""	"1154"	"72"	"37.000"	"30.000"	"3.92803919966289E-06"	"24"	"0"	"4.886E-06"	"1.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQMFDAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.9125"	"0.0000"	"1"	"1"	"1"	"717.40387"	"2150.19706"	"2150.19315"	"1.82"	"0.00130"	"17/144"	"17"	"144"	"16830229.5571289"	"HCD"	"MS2"	"3.25948"	"252.0"	"68.912"	"75.2196"	"25106"	"25106"	"25089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"446.5"	""	"288.3"	""	"333.1"	""	"269.8"	"9.0"	"542.4"	"502.0"	""	"1147"	"80"	"37.000"	"30.000"	"5.57870532836089E-07"	"25"	"0"	"5.84E-06"	"1.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQqMFDAk.[N]"	"N-Term(TMT6plex); Q10(Deamidated); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.1500"	"0.0000"	"1"	"1"	"1"	"717.73718"	"2151.19699"	"2151.17716"	"9.22"	"0.00661"	"14/144"	"14"	"144"	"1218820.07836914"	"HCD"	"MS2"	"23.22385"	"35.0"	"100.000"	"74.8382"	"25002"	"25002"	"24975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.4"	""	"48.4"	""	"45.7"	""	"46.7"	"0.3"	"62.6"	"68.2"	""	"1167"	"20"	"37.000"	"30.000"	"0.599847509956798"	"14"	"0.000523"	"0.002961"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQYFGELALVTNKPR"	"[KR].gQYFGELALVTNkPR.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"P12368; P12369"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4;cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12368; P12369"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4; cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"717.74713"	"2151.22684"	"2151.23264"	"-2.70"	"-0.00193"	"18/148"	"18"	"148"	"3273222.86572266"	"HCD"	"MS2"	"16.71361"	"176.2"	"100.000"	"54.0776"	"16538"	"16538"	"16518"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.7"	""	"220.8"	""	"232.4"	""	"308.0"	""	"350.7"	"348.6"	""	"932"	"28"	"36.000"	"29.000"	"0.0804240457667435"	"14"	"0"	"5.342E-07"	"1.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQYFGELALVTNKPR"	"[KR].gQYFGELALVTNkPR.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"2"	"2"	"P12368; P12369"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4;cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"P12368; P12369"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4; cAMP-dependent protein kinase type II-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2b PE=1 SV=3"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"717.74890"	"2151.23215"	"2151.23264"	"-0.23"	"-0.00016"	"12/148"	"12"	"148"	"3096313.71130371"	"HCD"	"MS2"	"0"	"161.0"	"100.000"	"54.0455"	"16525"	"16525"	"16507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.3"	""	"228.0"	""	"206.6"	""	"286.7"	""	"312.3"	"299.0"	""	"898"	"30"	"36.000"	"29.000"	"0.0460517714886882"	"15"	"0"	"5.618E-07"	"1.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLANFLAQTEALMK"	"[K].iLLANFLAqTEALmk.[G]"	"N-Term(TMT6plex); Q9(Deamidated); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"1076.12317"	"2151.23906"	"2151.24993"	"-5.05"	"-0.00544"	"3/134"	"3"	"134"	"113879.299926758"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"78.4123"	"26398"	"26398"	"26369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"6.3"	""	"5.1"	""	"9.0"	""	"6.0"	"9.3"	""	"829"	"4"	"36.000"	"29.000"	"15.578460407756"	"15"	"0.00958"	"0.4346"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLANFLAQTEALMK"	"[K].iLLAnFLAQTEALmk.[G]"	"N-Term(TMT6plex); N5(Deamidated); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"2"	"2"	"1076.12317"	"2151.23906"	"2151.24993"	"-5.05"	"-0.00544"	"3/134"	"3"	"134"	"113879.299926758"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"78.4123"	"26398"	"26398"	"26369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"6.3"	""	"5.1"	""	"9.0"	""	"6.0"	"9.3"	""	"829"	"4"	"36.000"	"29.000"	"15.578460407756"	"15"	"0.00958"	"0.4346"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLANFLAQTEALMK"	"[K].iLLANFLAqTEALmk.[G]"	"N-Term(TMT6plex); Q9(Deamidated); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"717.75153"	"2151.24002"	"2151.24993"	"-4.61"	"-0.00330"	"4/134"	"4"	"134"	"772022.703796387"	"HCD"	"MS2"	"26.01791"	"17.6"	"100.000"	"78.2386"	"26378"	"26378"	"26351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.9"	""	"19.9"	""	"24.3"	""	"23.8"	"2.3"	"41.3"	"30.2"	""	"815"	"2"	"36.000"	"29.000"	"24.4978298024436"	"13"	"0.002925"	"0.0502"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLANFLAQTEALMK"	"[K].iLLANFLAqTEALmk.[G]"	"N-Term(TMT6plex); Q9(Deamidated); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"1076.12500"	"2151.24272"	"2151.24993"	"-3.35"	"-0.00361"	"3/134"	"3"	"134"	"116255.69152832"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"78.3239"	"26413"	"26413"	"26383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	""	""	"2.9"	""	"3.1"	""	"6.9"	"5.0"	""	"784"	"3"	"35.000"	"28.000"	"20.1505111420311"	"15"	"0.008152"	"0.3453"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILLANFLAQTEALMK"	"[K].iLLAnFLAQTEALmk.[G]"	"N-Term(TMT6plex); N5(Deamidated); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"2"	"4"	"1076.12500"	"2151.24272"	"2151.24993"	"-3.35"	"-0.00361"	"3/134"	"3"	"134"	"116255.69152832"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"78.3239"	"26413"	"26413"	"26383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	""	""	"2.9"	""	"3.1"	""	"6.9"	"5.0"	""	"784"	"3"	"35.000"	"28.000"	"20.1505111420311"	"15"	"0.008152"	"0.3453"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTYFLPVIGLVDAEK"	"[R].qTYFLPVIGLVDAEk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.9783"	"0.0000"	"1"	"1"	"1"	"717.75299"	"2151.24442"	"2151.24656"	"-1.00"	"-0.00071"	"13/164"	"13"	"164"	"902748.412658691"	"HCD"	"MS2"	"4.597567"	"27.0"	"100.000"	"85.6070"	"29378"	"29378"	"29358"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.7"	""	"29.4"	""	"33.5"	""	"48.3"	""	"54.9"	"51.2"	""	"773"	"46"	"35.000"	"28.000"	"0.00100265032345892"	"16"	"0"	"1.318E-05"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFAIQDPTLPLTSYK"	"[K].vFAIQDPTLPLTSYk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"717.75323"	"2151.24515"	"2151.24656"	"-0.66"	"-0.00047"	"11/146"	"11"	"146"	"1310993.84832764"	"HCD"	"MS2"	"20.59254"	"41.7"	"100.000"	"74.3312"	"24743"	"24743"	"24721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.1"	""	"68.9"	""	"54.3"	""	"53.9"	"0.3"	"77.0"	"75.1"	""	"772"	"36"	"35.000"	"28.000"	"0.00884274913968361"	"15"	"0.0001308"	"0.0002976"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTYFLPVIGLVDAEK"	"[R].qTYFLPVIGLVDAEk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"717.75354"	"2151.24607"	"2151.24656"	"-0.23"	"-0.00017"	"11/164"	"11"	"164"	"846135.646728516"	"HCD"	"MS2"	"7.912652"	"27.5"	"100.000"	"85.5224"	"29296"	"29296"	"29278"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.8"	""	"31.9"	""	"37.5"	""	"49.7"	""	"55.0"	"50.8"	""	"755"	"36"	"35.000"	"28.000"	"0.0103256394418078"	"16"	"0"	"2.121E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTYFLPVIGLVDAEK"	"[R].qTYFLPVIGLVDAEk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1076.12671"	"2151.24614"	"2151.24656"	"-0.20"	"-0.00021"	"6/164"	"6"	"164"	"89721.1137084961"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"85.5754"	"29318"	"29318"	"29294"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.1"	""	"4.0"	""	"6.4"	""	"8.7"	""	"9.4"	"7.7"	""	"755"	"19"	"35.000"	"28.000"	"0.491945458865743"	"14"	"0.0003839"	"0.002022"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTYFLPVIGLVDAEK"	"[R].qTYFLPVIGLVDAEk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1076.12708"	"2151.24687"	"2151.24656"	"0.14"	"0.00016"	"5/164"	"5"	"164"	"101073.223632813"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"85.6692"	"29404"	"29404"	"29374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.5"	""	"2.5"	""	"3.4"	""	"7.6"	""	"6.7"	"8.4"	""	"754"	"24"	"35.000"	"28.000"	"0.158613938900935"	"14"	"0.0004166"	"0.002121"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPDLPEDLYHLIK"	"[K].gLAPDLPEDLYHLIk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"718.08478"	"2152.23978"	"2152.24181"	"-0.94"	"-0.00068"	"16/120"	"16"	"120"	"689204.45300293"	"HCD"	"MS2"	"40.1424"	"29.7"	"100.000"	"77.9642"	"26266"	"26266"	"26241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.2"	""	"39.2"	""	"41.2"	""	"53.0"	""	"49.1"	"56.4"	""	"779"	"37"	"35.000"	"28.000"	"0.00712045034187597"	"20"	"0"	"0.0001532"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ILLANFLAQTEALMK"	"[K].iLLAnFLAqTEALmk.[G]"	"N-Term(TMT6plex); N5(Deamidated); Q9(Deamidated); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"4"	"718.08527"	"2152.24125"	"2152.23395"	"3.39"	"0.00243"	"3/134"	"3"	"134"	"764195.049316406"	"HCD"	"MS2"	"32.83452"	"16.9"	"100.000"	"78.2576"	"26335"	"26335"	"26305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.2"	""	"22.3"	""	"20.8"	""	"26.6"	""	"33.0"	"33.0"	""	"775"	"1"	"35.000"	"28.000"	"29.7352577127705"	"14"	"0.006875"	"0.259"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPDLPEDLYHLIK"	"[K].gLAPDLPEDLYHLIk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"718.08533"	"2152.24143"	"2152.24181"	"-0.18"	"-0.00013"	"18/120"	"18"	"120"	"3458069.03790283"	"HCD"	"MS2"	"0"	"94.2"	"100.000"	"77.7794"	"26139"	"26139"	"26121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.9"	""	"115.2"	""	"138.7"	""	"154.9"	"0.2"	"180.7"	"166.0"	""	"773"	"36"	"35.000"	"28.000"	"0.00899807271087526"	"15"	"0"	"3.179E-06"	"1.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPDLPEDLYHLIK"	"[K].gLAPDLPEDLYHLIk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"718.08557"	"2152.24216"	"2152.24181"	"0.16"	"0.00012"	"12/120"	"12"	"120"	"6867133.61462402"	"HCD"	"MS2"	"0"	"169.4"	"100.000"	"77.6402"	"26134"	"26134"	"26117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.8"	""	"216.0"	""	"261.2"	""	"290.2"	""	"316.8"	"297.5"	""	"762"	"33"	"35.000"	"28.000"	"0.019139252660803"	"16"	"0"	"3.48E-06"	"1.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPDLPEDLYHLIK"	"[K].gLAPDLPEDLYHLIk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"718.08575"	"2152.24271"	"2152.24181"	"0.42"	"0.00030"	"17/120"	"17"	"120"	"1891847.4921875"	"HCD"	"MS2"	"13.1018"	"59.7"	"100.000"	"77.3586"	"26019"	"26019"	"25989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.2"	""	"82.1"	""	"83.8"	""	"104.2"	""	"101.8"	"107.2"	""	"766"	"36"	"35.000"	"28.000"	"0.0105002290784838"	"19"	"0"	"3.153E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPDLPEDLYHLIK"	"[K].gLAPDLPEDLYHLIk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"718.08600"	"2152.24344"	"2152.24181"	"0.76"	"0.00054"	"17/120"	"17"	"120"	"3880512.63568115"	"HCD"	"MS2"	"0"	"106.7"	"100.000"	"77.4613"	"26010"	"26010"	"25993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.6"	""	"149.5"	""	"148.1"	""	"192.7"	""	"185.4"	"192.4"	""	"731"	"35"	"35.000"	"28.000"	"0.0127610785307423"	"16"	"0"	"3.949E-06"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPDLPEDLYHLIK"	"[K].gLAPDLPEDLYHLIk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"718.08655"	"2152.24509"	"2152.24181"	"1.52"	"0.00109"	"11/120"	"11"	"120"	"459394.706604004"	"HCD"	"MS2"	"17.36408"	"23.3"	"100.000"	"78.0917"	"26267"	"26267"	"26241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.7"	""	"29.1"	""	"34.6"	""	"34.0"	"0.2"	"44.5"	"47.6"	""	"702"	"32"	"35.000"	"28.000"	"0.0221466027912548"	"26"	"0.0002277"	"0.001169"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLISHDELFSDIYK"	"[R].dLISHDELFSDIYk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"718.38861"	"2153.15128"	"2153.15306"	"-0.83"	"-0.00059"	"11/124"	"11"	"124"	"925384.076721191"	"HCD"	"MS2"	"0"	"43.0"	"100.000"	"62.1347"	"19825"	"19825"	"19795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.6"	""	"63.5"	""	"61.4"	""	"62.7"	"0.3"	"72.2"	"90.5"	""	"1486"	"25"	"38.000"	"31.000"	"0.214777515259755"	"14"	"0"	"0.0001537"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLISHDELFSDIYK"	"[R].dLISHDELFSDIYk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"718.38953"	"2153.15403"	"2153.15306"	"0.45"	"0.00032"	"14/124"	"14"	"124"	"819521.567321777"	"HCD"	"MS2"	"8.243844"	"47.5"	"100.000"	"62.0447"	"19735"	"19735"	"19705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.2"	""	"68.7"	""	"59.2"	""	"77.2"	"1.5"	"87.9"	"95.2"	""	"1500"	"14"	"38.000"	"31.000"	"2.79937618346791"	"13"	"0.0001859"	"0.0003213"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFVTFDDHDPVDK"	"[R].gFGFVTFDDHDPVDk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"718.70148"	"2154.08988"	"2154.09079"	"-0.42"	"-0.00030"	"17/128"	"17"	"128"	"15355109.8005371"	"HCD"	"MS2"	"12.13704"	"624.0"	"100.000"	"57.7803"	"17997"	"17997"	"17979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"831.4"	""	"664.0"	""	"667.7"	""	"1173.6"	""	"1337.6"	"1259.9"	""	"1195"	"42"	"37.000"	"30.000"	"0.00419119540805933"	"17"	"0"	"1.001E-05"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFVTFDDHDPVDK"	"[R].gFGFVTFDDHDPVDk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"718.70245"	"2154.09281"	"2154.09079"	"0.94"	"0.00067"	"17/128"	"17"	"128"	"11454571.0358887"	"HCD"	"MS2"	"43.25819"	"462.2"	"100.000"	"57.9150"	"18106"	"18106"	"18085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"574.8"	""	"466.6"	""	"437.3"	""	"939.4"	"4.1"	"1012.6"	"958.4"	""	"1223"	"54"	"37.000"	"30.000"	"0.000259057673739294"	"19"	"0"	"2.996E-06"	"1.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVPGGPQMIQLSLDGK"	"[K].rVPGGPQMIQLSLDGk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"718.75128"	"2154.23929"	"2154.24691"	"-3.54"	"-0.00254"	"11/154"	"11"	"154"	"8954765.06481934"	"HCD"	"MS2"	"40.52588"	"342.3"	"100.000"	"50.2736"	"15001"	"15001"	"14986"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"453.9"	""	"475.8"	""	"510.5"	""	"551.2"	""	"650.4"	"604.5"	""	"739"	"12"	"35.000"	"28.000"	"2.44688998117801"	"19"	"0.0001889"	"0.000607"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVPGGPQMIQLSLDGK"	"[K].rVPGGPQMIQLSLDGk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"1"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"718.75153"	"2154.24002"	"2154.24691"	"-3.20"	"-0.00230"	"11/154"	"11"	"154"	"9135885.17858887"	"HCD"	"MS2"	"29.16195"	"260.6"	"78.914"	"50.0250"	"14851"	"14851"	"14840"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.9"	""	"352.4"	""	"392.6"	""	"395.6"	""	"515.3"	"483.3"	""	"729"	"10"	"35.000"	"28.000"	"3.61158243913414"	"17"	"0"	"0.0001754"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTPSAVVIVEDAK"	"[R].qLLLTPSAVVIVEDAk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"718.77539"	"2154.31162"	"2154.31498"	"-1.56"	"-0.00112"	"13/168"	"13"	"168"	"638067.55859375"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"76.7687"	"25728"	"25728"	"25716"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.9"	""	"42.7"	""	"44.1"	""	"48.2"	"0.8"	"68.2"	"53.5"	""	"317"	"48"	"32.000"	"25.000"	"0.000251205571005087"	"16"	"0"	"0.0001215"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSYFVEWIPNNVK"	"[K].nSSYFVEWIPNNVk.[TV]"	"N-Term(TMT6plex); K14(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1078.08240"	"2155.15752"	"2155.15881"	"-0.60"	"-0.00065"	"9/140"	"9"	"140"	"538960.688842773"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"68.2383"	"22256"	"22256"	"22234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.2"	""	"50.4"	""	"49.7"	""	"59.4"	""	"65.0"	"64.6"	""	"1221"	"46"	"37.000"	"30.000"	"0.00139857470201472"	"15"	"0"	"7.511E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSYFVEWIPNNVK"	"[K].nSSYFVEWIPNNVk.[TV]"	"N-Term(TMT6plex); K14(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.05750"	"2155.15793"	"2155.15881"	"-0.41"	"-0.00029"	"8/140"	"8"	"140"	"5047865.04205322"	"HCD"	"MS2"	"10.34013"	"201.5"	"100.000"	"68.2277"	"22303"	"22303"	"22282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"209.7"	""	"266.2"	""	"254.5"	""	"369.5"	""	"396.8"	"422.9"	""	"1232"	"12"	"37.000"	"30.000"	"3.61893441158342"	"13"	"0.0001889"	"0.0005831"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSYFVEWIPNNVK"	"[K].nSSYFVEWIPNNVk.[TV]"	"N-Term(TMT6plex); K14(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"539.54504"	"2155.15835"	"2155.15881"	"-0.22"	"-0.00012"	"9/140"	"9"	"140"	"2196972.65679932"	"HCD"	"MS2"	"5.220907"	"41.7"	"100.000"	"68.2014"	"22241"	"22241"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.0"	""	"58.4"	""	"60.3"	""	"62.4"	""	"79.0"	"74.6"	""	"1230"	"37"	"37.000"	"30.000"	"0.0123844041366537"	"15"	"0"	"4.307E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSYFVEWIPNNVK"	"[K].nSSYFVEWIPNNVk.[TV]"	"N-Term(TMT6plex); K14(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.05780"	"2155.15885"	"2155.15881"	"0.02"	"0.00001"	"11/140"	"11"	"140"	"6559127.99902344"	"HCD"	"MS2"	"8.477716"	"163.8"	"100.000"	"67.9068"	"22172"	"22172"	"22154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.7"	""	"244.0"	""	"252.0"	""	"259.7"	"0.4"	"290.3"	"284.4"	""	"1216"	"33"	"37.000"	"30.000"	"0.0328022458489198"	"15"	"0"	"0.0001479"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSYFVEWIPNNVK"	"[K].nSSYFVEWIPNNVk.[TV]"	"N-Term(TMT6plex); K14(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1078.08350"	"2155.15972"	"2155.15881"	"0.42"	"0.00045"	"8/140"	"8"	"140"	"826242.357971191"	"HCD"	"MS2"	"0"	"52.4"	"100.000"	"68.0317"	"22223"	"22223"	"22202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.6"	""	"81.6"	""	"78.4"	""	"81.0"	"0.0"	"92.3"	"87.0"	""	"1218"	"64"	"37.000"	"30.000"	"2.65838141834261E-05"	"16"	"0"	"5.878E-05"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSYFVEWIPNNVK"	"[K].nSSYFVEWIPNNVk.[TV]"	"N-Term(TMT6plex); K14(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"719.05841"	"2155.16068"	"2155.15881"	"0.87"	"0.00062"	"13/140"	"13"	"140"	"10105007.1033936"	"HCD"	"MS2"	"0.994388"	"189.7"	"80.631"	"68.1112"	"22204"	"22204"	"22186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"257.7"	""	"281.4"	""	"296.4"	""	"306.0"	""	"326.9"	"329.2"	""	"1224"	"42"	"37.000"	"30.000"	"0.00383487685179469"	"16"	"0"	"7.884E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTTPATLTLPEIAASGLTR"	"[R].lTTPATLTLPEIAASGLTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7D2"	"Protein rogdi homolog OS=Rattus norvegicus OX=10116 GN=Rogdi PE=1 SV=1"	"Q4V7D2"	"Protein rogdi homolog OS=Rattus norvegicus OX=10116 GN=Rogdi PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"719.09210"	"2155.26175"	"2155.25355"	"3.81"	"0.00273"	"16/176"	"16"	"176"	"613240.557434082"	"HCD"	"MS2"	"14.17504"	"19.8"	"100.000"	"76.0276"	"25435"	"25435"	"25409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.9"	""	"22.0"	""	"31.5"	""	"34.9"	"0.9"	"35.9"	"35.8"	""	"602"	"35"	"34.000"	"27.000"	"0.00971776730635503"	"16"	"0"	"4.235E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSYFVEWIPNNVK"	"[K].nSSYFVEWIPNNVk.[TV]"	"N-Term(TMT6plex); N1(Deamidated); K14(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"719.38385"	"2156.13700"	"2156.14283"	"-2.70"	"-0.00194"	"11/140"	"11"	"140"	"1065725.67504883"	"HCD"	"MS2"	"25.62564"	"27.6"	"100.000"	"76.2231"	"25562"	"25562"	"25535"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.1"	""	"38.7"	""	"40.6"	""	"45.5"	""	"53.0"	"50.5"	""	"1297"	"38"	"38.000"	"31.000"	"0.0100209750404066"	"16"	"0"	"0.0001275"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSYFVEWIPNNVK"	"[K].nSSYFVEWIPnNVk.[TV]"	"N-Term(TMT6plex); N11(Deamidated); K14(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.2308"	"0.0000"	"1"	"1"	"1"	"719.38446"	"2156.13883"	"2156.14283"	"-1.85"	"-0.00133"	"11/140"	"11"	"140"	"1525790.4385376"	"HCD"	"MS2"	"30.69794"	"52.5"	"100.000"	"68.9380"	"22593"	"22593"	"22570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.1"	""	"67.3"	""	"66.4"	""	"90.2"	""	"109.7"	"103.8"	""	"1286"	"39"	"38.000"	"31.000"	"0.00899934648414193"	"15"	"0"	"0.000156"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSYFVEWIPNNVK"	"[K].nSSYFVEWIPNNVk.[TV]"	"N-Term(TMT6plex); N1(Deamidated); K14(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"719.38483"	"2156.13993"	"2156.14283"	"-1.35"	"-0.00097"	"11/140"	"11"	"140"	"1169648.07073975"	"HCD"	"MS2"	"24.71809"	"25.6"	"100.000"	"76.2772"	"25533"	"25533"	"25505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.9"	""	"32.6"	""	"37.6"	""	"45.6"	""	"44.2"	"47.5"	""	"1277"	"14"	"38.000"	"31.000"	"2.80647321457051"	"18"	"0"	"0.0001657"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSYFVEWIPNNVK"	"[K].nSSYFVEWIPnNVk.[TV]"	"N-Term(TMT6plex); N11(Deamidated); K14(TMT6plex)"	"4"	"5"	"P85108; Q4QRB4; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.1957"	"0.0000"	"1"	"1"	"1"	"719.38544"	"2156.14176"	"2156.14283"	"-0.50"	"-0.00036"	"12/140"	"12"	"140"	"1412868.35443115"	"HCD"	"MS2"	"63.76161"	"48.9"	"100.000"	"69.1008"	"22608"	"22608"	"22586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.3"	""	"63.6"	""	"66.2"	""	"80.8"	"1.4"	"99.3"	"97.8"	""	"1278"	"46"	"38.000"	"31.000"	"0.00178854906324636"	"16"	"0"	"3.753E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNGLVIASLENYAPLSR"	"[K].lPNGLVIASLENYAPLSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"719.41614"	"2156.23386"	"2156.22767"	"2.87"	"0.00206"	"15/182"	"15"	"182"	"584236.519836426"	"HCD"	"MS2"	"18.90848"	"12.6"	"100.000"	"83.0414"	"28336"	"28336"	"28317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.9"	""	"17.4"	""	"23.9"	""	"13.1"	""	"27.6"	"21.7"	""	"914"	"39"	"36.000"	"29.000"	"0.00603832104823266"	"16"	"0"	"5.868E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNGLVIASLENYAPLSR"	"[K].lPNGLVIASLENYAPLSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.41614"	"2156.23386"	"2156.22767"	"2.87"	"0.00206"	"12/182"	"12"	"182"	"879028.63873291"	"HCD"	"MS2"	"41.13515"	"18.7"	"100.000"	"83.0193"	"28276"	"28276"	"28256"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.4"	""	"25.1"	""	"28.3"	""	"22.5"	""	"37.6"	"38.3"	""	"914"	"37"	"36.000"	"29.000"	"0.00876831614486323"	"15"	"0"	"3.972E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLNPQWNESFTFK"	"[R].sTLNPQWNESFTFk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"719.71558"	"2157.13218"	"2157.13808"	"-2.74"	"-0.00197"	"15/146"	"15"	"146"	"2232511.09735107"	"HCD"	"MS2"	"27.57762"	"83.7"	"100.000"	"62.2032"	"19800"	"19800"	"19769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.2"	""	"109.6"	""	"107.9"	""	"160.1"	""	"156.9"	"153.9"	""	"1303"	"42"	"38.000"	"31.000"	"0.00399865946364864"	"17"	"0"	"1.724E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNGLVIASLENYAPLSR"	"[K].lPnGLVIASLENYAPLSR.[I]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"719.74139"	"2157.20963"	"2157.21169"	"-0.95"	"-0.00069"	"12/182"	"12"	"182"	"116046.989990234"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"88.4039"	"30480"	"30480"	"30469"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	"7.6"	""	"2.9"	""	"5.2"	""	"6.9"	"7.4"	""	"1044"	"29"	"37.000"	"30.000"	"0.0710674124247225"	"16"	"0"	"0.0001166"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNGLVIASLENYAPLSR"	"[K].lPnGLVIASLENYAPLSR.[I]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"719.74200"	"2157.21146"	"2157.21169"	"-0.10"	"-0.00008"	"4/182"	"4"	"182"	"109222.837280273"	"HCD"	"MS2"	"9.224944"	"5.5"	"100.000"	"87.3669"	"30039"	"30039"	"30013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"9.0"	""	"10.5"	""	"7.9"	""	"7.9"	"9.8"	""	"1053"	"14"	"37.000"	"30.000"	"2.07681769542634"	"17"	"0.0006037"	"0.00371"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNGLVIASLENYAPLSR"	"[K].lPnGLVIASLENYAPLSR.[I]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"719.74213"	"2157.21183"	"2157.21169"	"0.07"	"0.00005"	"15/182"	"15"	"182"	"199458.954467773"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"88.2431"	"30377"	"30377"	"30367"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"4.5"	""	"4.9"	""	"8.1"	""	"8.5"	"6.1"	""	"1050"	"51"	"37.000"	"30.000"	"0.000395511670960202"	"20"	"0"	"2.53E-05"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSAFPFESGKPFK"	"[R].qSAFPFESGkPFk.[I]"	"N-Term(TMT6plex); K10(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"719.74841"	"2157.23069"	"2157.23114"	"-0.21"	"-0.00015"	"10/132"	"10"	"132"	"6942512.58453369"	"HCD"	"MS2"	"2.888666"	"499.1"	"100.000"	"49.0317"	"14451"	"14451"	"14431"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"758.7"	""	"556.2"	""	"580.6"	""	"919.9"	""	"991.0"	"934.6"	""	"851"	"11"	"36.000"	"29.000"	"3.48256767351353"	"16"	"0"	"1.562E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSAFPFESGKPFK"	"[R].qSAFPFESGkPFk.[I]"	"N-Term(TMT6plex); K10(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"719.74872"	"2157.23160"	"2157.23114"	"0.22"	"0.00015"	"14/132"	"14"	"132"	"7717247.58428955"	"HCD"	"MS2"	"26.98973"	"549.0"	"100.000"	"49.2697"	"14596"	"14596"	"14574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"822.1"	""	"616.6"	""	"659.1"	""	"974.9"	""	"1092.6"	"1041.6"	""	"852"	"10"	"36.000"	"29.000"	"3.96651954949296"	"16"	"0.0001308"	"0.0002299"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAmQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M3(Oxidation); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"1079.56335"	"2158.11943"	"2158.12380"	"-2.02"	"-0.00218"	"8/174"	"8"	"174"	"137659.643127441"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"70.1217"	"23025"	"23025"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.9"	""	"5.0"	""	"4.6"	""	"29.7"	""	"13.8"	"13.2"	""	"1211"	"26"	"37.000"	"30.000"	"0.137440316781565"	"17"	"0.00274"	"0.04427"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAmQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M3(Oxidation); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"1079.56494"	"2158.12261"	"2158.12380"	"-0.55"	"-0.00060"	"9/174"	"9"	"174"	"121154.824401855"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"70.0487"	"23047"	"23047"	"23018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	"4.1"	""	"4.9"	""	"22.4"	""	"8.9"	"9.9"	""	"1236"	"26"	"37.000"	"30.000"	"0.142229104315846"	"16"	"0.00103"	"0.01124"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAmQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M3(Oxidation); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.04578"	"2158.12278"	"2158.12380"	"-0.47"	"-0.00034"	"13/174"	"13"	"174"	"2654961.16149902"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"69.8738"	"22975"	"22975"	"22959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.0"	""	"23.6"	""	"30.2"	""	"51.7"	""	"45.6"	"43.8"	""	"1230"	"48"	"37.000"	"30.000"	"0.00102772072780109"	"15"	"0"	"7.034E-06"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFR"	"[K].lAmQEFmILPVGASSFR.[E]"	"N-Term(TMT6plex); M3(Oxidation); M7(Oxidation)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.04584"	"2158.12296"	"2158.12380"	"-0.39"	"-0.00028"	"15/174"	"15"	"174"	"3162008.42041016"	"HCD"	"MS2"	"4.097942"	"33.2"	"100.000"	"70.0209"	"22983"	"22983"	"22966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.3"	""	"28.6"	""	"42.2"	""	"76.2"	""	"68.3"	"66.9"	""	"1230"	"37"	"37.000"	"30.000"	"0.0131182262158515"	"15"	"0"	"4.039E-06"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAHGISLFLVENGMK"	"[R].sPAHGISLFLVENGMk.[G]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.07410"	"2158.20774"	"2158.20947"	"-0.80"	"-0.00058"	"12/148"	"12"	"148"	"2760807.078125"	"HCD"	"MS2"	"60.79662"	"124.2"	"100.000"	"57.6907"	"17961"	"17961"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.3"	""	"159.3"	""	"168.1"	""	"188.9"	""	"248.8"	"254.7"	""	"1087"	"25"	"37.000"	"30.000"	"0.163004482906979"	"14"	"0"	"9.13E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LILGLMMPPAHYDAK"	"[R].lILGLmmPPAHYDAk.[Q]"	"N-Term(TMT6plex); M6(Oxidation); M7(Oxidation); K15(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9608"	"0.0000"	"1"	"1"	"1"	"720.73651"	"2160.19498"	"2160.19613"	"-0.53"	"-0.00038"	"15/112"	"15"	"112"	"1536635.87268066"	"HCD"	"MS2"	"48.7584"	"93.7"	"100.000"	"50.3525"	"14982"	"14982"	"14964"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"115.0"	""	"121.7"	""	"129.5"	""	"176.1"	""	"166.7"	"180.6"	""	"1183"	"51"	"37.000"	"30.000"	"0.000450769734430031"	"17"	"0"	"1.114E-05"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RKPDTIEVQQMK"	"[R].rkPDTIEVQQMk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.82446"	"2160.27602"	"2160.27777"	"-0.81"	"-0.00044"	"6/116"	"6"	"116"	"12597874.145874"	"HCD"	"MS2"	"7.416346"	"200.7"	"55.553"	"32.3292"	"7642"	"7642"	"7624"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"287.5"	""	"237.7"	""	"246.4"	""	"273.0"	""	"421.8"	"441.1"	""	"632"	"8"	"34.000"	"28.000"	"4.5257137617044"	"13"	"0.0001859"	"0.0003638"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RKPDTIEVQQMK"	"[R].rkPDTIEVQQMk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.76361"	"2160.27628"	"2160.27777"	"-0.69"	"-0.00050"	"7/116"	"7"	"116"	"855926.766235352"	"HCD"	"MS2"	"0"	"53.7"	"100.000"	"32.3017"	"7631"	"7631"	"7608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.9"	""	"62.3"	""	"59.3"	""	"65.0"	""	"122.9"	"124.6"	""	"627"	"17"	"34.000"	"27.000"	"0.594617306299694"	"14"	"0.0001889"	"0.0003895"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RKPDTIEVQQMK"	"[R].rkPDTIEVQQMk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.82471"	"2160.27700"	"2160.27777"	"-0.36"	"-0.00019"	"6/116"	"6"	"116"	"16518353.6958008"	"HCD"	"MS2"	"15.51974"	"243.5"	"55.198"	"32.3852"	"7708"	"7708"	"7686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"370.5"	""	"295.1"	""	"296.1"	""	"319.4"	"1.0"	"514.8"	"515.0"	""	"607"	"10"	"34.000"	"27.000"	"2.87182978474518"	"13"	"0"	"0.0001309"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RKPDTIEVQQMK"	"[R].rkPDTIEVQQMk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.76392"	"2160.27719"	"2160.27777"	"-0.27"	"-0.00019"	"11/116"	"11"	"116"	"841938.023498535"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"32.4058"	"7717"	"7717"	"7686"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.7"	""	"65.5"	""	"63.4"	""	"66.3"	""	"120.5"	"113.3"	""	"605"	"22"	"34.000"	"27.000"	"0.170893434880721"	"14"	"0.0001308"	"0.0002608"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGVNVEPFWPGLFAK"	"[K].aAGVNVEPFWPGLFAk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P19944"	"60S acidic ribosomal protein P1 OS=Rattus norvegicus OX=10116 GN=Rplp1 PE=3 SV=1"	"P19944"	"60S acidic ribosomal protein P1 OS=Rattus norvegicus OX=10116 GN=Rplp1 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1081.11121"	"2161.21514"	"2161.22102"	"-2.72"	"-0.00294"	"11/142"	"11"	"142"	"122888.920532227"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"83.4095"	"28487"	"28487"	"28461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"5.1"	""	"11.1"	""	"13.5"	""	"12.3"	"13.6"	""	"1098"	"43"	"37.000"	"30.000"	"0.00257378546797751"	"15"	"7.476E-05"	"0.0001957"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGVNVEPFWPGLFAK"	"[K].aAGVNVEPFWPGLFAk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P19944"	"60S acidic ribosomal protein P1 OS=Rattus norvegicus OX=10116 GN=Rplp1 PE=3 SV=1"	"P19944"	"60S acidic ribosomal protein P1 OS=Rattus norvegicus OX=10116 GN=Rplp1 PE=3 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"1081.11292"	"2161.21855"	"2161.22102"	"-1.14"	"-0.00123"	"11/142"	"11"	"142"	"104749.205627441"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"83.3480"	"28411"	"28411"	"28382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"7.1"	""	"5.6"	""	"10.1"	""	"10.2"	"14.0"	""	"1062"	"39"	"37.000"	"30.000"	"0.00665417963893892"	"19"	"0"	"0.000149"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGVNVEPFWPGLFAK"	"[K].aAGVNVEPFWPGLFAk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P19944"	"60S acidic ribosomal protein P1 OS=Rattus norvegicus OX=10116 GN=Rplp1 PE=3 SV=1"	"P19944"	"60S acidic ribosomal protein P1 OS=Rattus norvegicus OX=10116 GN=Rplp1 PE=3 SV=1"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"721.07825"	"2161.22019"	"2161.22102"	"-0.38"	"-0.00028"	"13/142"	"13"	"142"	"2493011.04370117"	"HCD"	"MS2"	"1.129505"	"65.2"	"100.000"	"83.3129"	"28447"	"28447"	"28429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.3"	""	"68.0"	""	"85.1"	""	"142.3"	""	"128.9"	"144.3"	""	"1055"	"47"	"37.000"	"30.000"	"0.00113559236506711"	"16"	"0"	"9.876E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGVNVEPFWPGLFAK"	"[K].aAGVNVEPFWPGLFAk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P19944"	"60S acidic ribosomal protein P1 OS=Rattus norvegicus OX=10116 GN=Rplp1 PE=3 SV=1"	"P19944"	"60S acidic ribosomal protein P1 OS=Rattus norvegicus OX=10116 GN=Rplp1 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.07861"	"2161.22129"	"2161.22102"	"0.12"	"0.00009"	"13/142"	"13"	"142"	"2971857.02142334"	"HCD"	"MS2"	"2.360348"	"81.6"	"100.000"	"83.3183"	"28399"	"28399"	"28382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.8"	""	"78.8"	""	"100.1"	""	"190.5"	""	"156.2"	"174.2"	""	"1042"	"53"	"37.000"	"30.000"	"0.000259321021274026"	"16"	"0"	"7.495E-06"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APSIIFIDELDAIGTK"	"[K].aPSIIFIDELDAIGTk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"721.08820"	"2161.25003"	"2161.25204"	"-0.93"	"-0.00067"	"12/144"	"12"	"144"	"231866.407409668"	"HCD"	"MS2"	"2.353842"	"9.2"	"100.000"	"88.7694"	"30622"	"30622"	"30612"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"15.0"	""	"10.4"	""	"17.4"	""	"18.6"	"16.6"	""	"854"	"41"	"36.000"	"29.000"	"0.00313637421703088"	"17"	"0"	"0.0001136"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APSIIFIDELDAIGTK"	"[K].aPSIIFIDELDAIGTk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"721.08832"	"2161.25040"	"2161.25204"	"-0.76"	"-0.00055"	"5/144"	"5"	"144"	"96480.5737304688"	"HCD"	"MS2"	"17.60672"	"5.1"	"100.000"	"88.8839"	"30621"	"30621"	"30612"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"6.6"	""	"6.4"	""	"6.0"	""	"11.8"	"11.4"	""	"854"	"11"	"36.000"	"29.000"	"3.49484464533556"	"16"	"0.0006037"	"0.005786"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APSIIFIDELDAIGTK"	"[K].aPSIIFIDELDAIGTk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"721.08868"	"2161.25150"	"2161.25204"	"-0.25"	"-0.00018"	"13/144"	"13"	"144"	"246175.661804199"	"HCD"	"MS2"	"4.725997"	"10.3"	"100.000"	"88.6135"	"30521"	"30521"	"30510"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.8"	""	"13.9"	""	"12.8"	""	"18.9"	""	"18.2"	"20.5"	""	"842"	"48"	"36.000"	"29.000"	"0.000661122740624425"	"25"	"0"	"3.663E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVNTVTTLVENKK"	"[R].aGVNTVTTLVENkk.[A]"	"N-Term(TMT6plex); K13(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.10791"	"2161.30918"	"2161.31593"	"-3.12"	"-0.00225"	"13/136"	"13"	"136"	"557689.587646484"	"HCD"	"MS2"	"50.09291"	"53.9"	"100.000"	"45.9244"	"13180"	"13180"	"13149"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.9"	""	"59.8"	""	"72.5"	""	"101.5"	"1.4"	"79.5"	"88.5"	""	"397"	"16"	"32.000"	"25.000"	"0.55304505197301"	"13"	"0.0001889"	"0.0007268"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVGFIGLGNMGNPMAK"	"[K].tPVGFIGLGNMGNPMAk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"721.40027"	"2162.18625"	"2162.18662"	"-0.17"	"-0.00012"	"15/142"	"15"	"142"	"1356070.48168945"	"HCD"	"MS2"	"31.0788"	"56.0"	"100.000"	"70.4102"	"23142"	"23142"	"23123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.9"	""	"62.9"	""	"69.2"	""	"77.1"	""	"116.3"	"133.1"	""	"1275"	"39"	"38.000"	"31.000"	"0.00743841130876365"	"16"	"0"	"3.593E-05"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGVNVEPFWPGLFAK"	"[K].aAGVnVEPFWPGLFAk.[A]"	"N-Term(TMT6plex); N5(Deamidated); K16(TMT6plex)"	"1"	"1"	"P19944"	"60S acidic ribosomal protein P1 OS=Rattus norvegicus OX=10116 GN=Rplp1 PE=3 SV=1"	"P19944"	"60S acidic ribosomal protein P1 OS=Rattus norvegicus OX=10116 GN=Rplp1 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1081.61523"	"2162.22319"	"2162.20503"	"8.40"	"0.00908"	"9/142"	"9"	"142"	"101643.386657715"	"HCD"	"MS2"	"100"	"4.8"	"100.000"	"83.3428"	"28460"	"28460"	"28429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.8"	""	"3.0"	""	"6.9"	""	"10.4"	""	"9.9"	"13.2"	""	"1104"	"18"	"37.000"	"30.000"	"0.924568467566593"	"14"	"0.0009404"	"0.009692"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVLPLGSGAIAGNPLGVDR"	"[R].iNVLPLGSGAIAGNPLGVDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"1081.62695"	"2162.24663"	"2162.24947"	"-1.31"	"-0.00142"	"5/210"	"5"	"210"	"180772.865234375"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"73.5145"	"24462"	"24462"	"24431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.6"	""	"9.0"	""	"7.3"	""	"10.8"	""	"7.7"	"10.1"	""	"884"	"22"	"36.000"	"29.000"	"0.302985796092076"	"17"	"0.0003839"	"0.001912"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVLPLGSGAIAGNPLGVDR"	"[R].iNVLPLGSGAIAGNPLGVDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1081.62744"	"2162.24761"	"2162.24947"	"-0.86"	"-0.00093"	"4/210"	"4"	"210"	"108976.235839844"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"73.6021"	"24446"	"24446"	"24417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"5.2"	""	"6.8"	""	"4.7"	""	"7.7"	"7.2"	""	"879"	"14"	"36.000"	"29.000"	"1.96317438750348"	"13"	"0.0002723"	"0.001367"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVLPLGSGAIAGNPLGVDR"	"[R].iNVLPLGSGAIAGNPLGVDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.42090"	"2162.24814"	"2162.24947"	"-0.61"	"-0.00044"	"23/210"	"23"	"210"	"2124896.57397461"	"HCD"	"MS2"	"2.384006"	"18.1"	"100.000"	"73.4548"	"24437"	"24437"	"24415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.8"	""	"28.7"	""	"21.6"	""	"35.8"	""	"36.1"	"30.3"	""	"883"	"73"	"36.000"	"29.000"	"2.35467356357784E-06"	"17"	"0"	"1.536E-07"	"1.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVLPLGSGAIAGNPLGVDR"	"[R].iNVLPLGSGAIAGNPLGVDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.42188"	"2162.25107"	"2162.24947"	"0.74"	"0.00053"	"15/210"	"15"	"210"	"1981212.58325195"	"HCD"	"MS2"	"3.178469"	"18.8"	"100.000"	"73.4683"	"24391"	"24391"	"24369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.3"	""	"24.1"	""	"24.1"	""	"36.8"	""	"32.0"	"30.6"	""	"835"	"91"	"36.000"	"29.000"	"3.62790979227031E-08"	"18"	"0"	"2.008E-08"	"1.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDSWRDEFLIQASPR"	"[K].tLDSWRDEFLIQASPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.71570"	"2163.13254"	"2163.13958"	"-3.26"	"-0.00235"	"15/166"	"15"	"166"	"4327099.97070313"	"HCD"	"MS2"	"11.7575"	"113.1"	"100.000"	"60.9293"	"19279"	"19279"	"19257"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.5"	""	"147.0"	""	"140.9"	""	"200.9"	"0.5"	"209.2"	"213.0"	""	"1317"	"30"	"38.000"	"31.000"	"0.0597799819122335"	"14"	"0"	"5.308E-05"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDSWRDEFLIQASPR"	"[K].tLDSWRDEFLIQASPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"1"	"3"	"3"	"0.4483"	"0.0000"	"1"	"1"	"1"	"721.71631"	"2163.13437"	"2163.13958"	"-2.41"	"-0.00174"	"17/166"	"17"	"166"	"4270429.41601563"	"HCD"	"MS2"	"6.115779"	"101.0"	"100.000"	"61.0949"	"19400"	"19400"	"19379"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.6"	""	"141.1"	""	"123.9"	""	"180.4"	""	"175.3"	"188.2"	""	"1328"	"29"	"38.000"	"31.000"	"0.0933615556022264"	"31"	"0"	"3.095E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNHLLGTFDLTGIPPAPR"	"[K].dNHLLGTFDLTGIPPAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"721.73047"	"2163.17685"	"2163.17597"	"0.41"	"0.00029"	"10/188"	"10"	"188"	"2039160.41107178"	"HCD"	"MS2"	"14.20066"	"68.9"	"100.000"	"61.5028"	"19567"	"19567"	"19539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.4"	""	"86.5"	""	"83.8"	""	"118.2"	""	"155.2"	"160.1"	""	"1321"	"48"	"38.000"	"31.000"	"0.00104923512744883"	"23"	"0"	"1.152E-06"	"1.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNHLLGTFDLTGIPPAPR"	"[K].dNHLLGTFDLTGIPPAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"721.73157"	"2163.18015"	"2163.17597"	"1.93"	"0.00139"	"17/188"	"17"	"188"	"1667407.27740479"	"HCD"	"MS2"	"8.419765"	"43.5"	"100.000"	"61.2887"	"19426"	"19426"	"19401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.3"	""	"56.8"	""	"59.0"	""	"75.4"	""	"84.8"	"87.1"	""	"1318"	"54"	"38.000"	"31.000"	"0.000284371071629497"	"28"	"0"	"5.535E-07"	"1.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIKDAISGIGTDEK"	"[K].eIkDAISGIGTDEk.[C]"	"N-Term(TMT6plex); K3(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"1"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"721.75433"	"2163.24845"	"2163.24757"	"0.40"	"0.00029"	"14/150"	"14"	"150"	"1474944.34503174"	"HCD"	"MS2"	"11.88691"	"107.1"	"100.000"	"44.7289"	"12695"	"12695"	"12673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.4"	""	"180.7"	""	"191.1"	""	"109.0"	"1.0"	"130.9"	"128.9"	""	"823"	"24"	"36.000"	"29.000"	"0.163444322606675"	"15"	"0"	"2.198E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMDSAQVAHWLDGTK"	"[R].fMDSAQVAHWLDGTk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.04669"	"2164.12552"	"2164.12613"	"-0.28"	"-0.00020"	"16/152"	"16"	"152"	"1154149.47033691"	"HCD"	"MS2"	"9.630435"	"60.1"	"100.000"	"66.5453"	"21573"	"21573"	"21545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.0"	""	"82.4"	""	"74.4"	""	"97.0"	""	"109.8"	"120.6"	""	"1292"	"42"	"38.000"	"31.000"	"0.00441806924143803"	"15"	"0"	"2.472E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPELQNLLLDDFFK"	"[R].nPELQNLLLDDFFk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"722.07263"	"2164.20334"	"2164.20543"	"-0.96"	"-0.00069"	"11/146"	"11"	"146"	"213486.463195801"	"HCD"	"MS2"	"5.828986"	"6.1"	"100.000"	"90.5218"	"31231"	"31231"	"31224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"6.3"	""	"10.8"	""	"12.0"	""	"8.7"	"15.2"	""	"1136"	"46"	"37.000"	"30.000"	"0.00129822012031725"	"22"	"0"	"0.0001835"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPELQNLLLDDFFK"	"[R].nPELQNLLLDDFFk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"1082.60547"	"2164.20366"	"2164.20543"	"-0.82"	"-0.00088"	"14/146"	"14"	"146"	"361635.982299805"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"90.8230"	"31335"	"31335"	"31329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.1"	""	"36.8"	""	"35.6"	""	"60.0"	""	"59.8"	"48.7"	""	"1136"	"61"	"37.000"	"30.000"	"4.43964593006171E-05"	"24"	"0"	"3.158E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPELQNLLLDDFFK"	"[R].nPELQNLLLDDFFk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.07281"	"2164.20389"	"2164.20543"	"-0.71"	"-0.00051"	"10/146"	"10"	"146"	"161975.895751953"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"90.6711"	"31310"	"31310"	"31306"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.6"	""	"7.0"	""	"10.0"	""	"8.3"	""	"13.4"	"13.0"	""	"1136"	"37"	"37.000"	"30.000"	"0.0120600285441613"	"15"	"0.0001889"	"0.0005357"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPELQNLLLDDFFK"	"[R].nPELQNLLLDDFFk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"722.07281"	"2164.20389"	"2164.20543"	"-0.71"	"-0.00051"	"13/146"	"13"	"146"	"234616.377807617"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"91.0443"	"31414"	"31414"	"31406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.9"	""	"12.0"	""	"16.1"	""	"17.2"	""	"12.7"	"16.4"	""	"1136"	"46"	"37.000"	"30.000"	"0.00132845955155851"	"22"	"0"	"4.638E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPELQNLLLDDFFK"	"[R].nPELQNLLLDDFFk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"1082.60559"	"2164.20391"	"2164.20543"	"-0.70"	"-0.00076"	"13/146"	"13"	"146"	"187517.551452637"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"90.9812"	"31419"	"31419"	"31414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.5"	""	"18.2"	""	"20.2"	""	"29.6"	""	"24.3"	"32.9"	""	"1136"	"50"	"37.000"	"30.000"	"0.000611432241341746"	"23"	"0"	"8.058E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPELQNLLLDDFFK"	"[R].nPELQNLLLDDFFk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.8431"	"0.0000"	"1"	"1"	"1"	"722.07318"	"2164.20499"	"2164.20543"	"-0.20"	"-0.00015"	"13/146"	"13"	"146"	"1591768.31854248"	"HCD"	"MS2"	"0"	"53.1"	"100.000"	"90.9357"	"31405"	"31405"	"31397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.2"	""	"57.3"	""	"75.1"	""	"91.0"	""	"94.6"	"97.4"	""	"1118"	"51"	"37.000"	"30.000"	"0.00049250632001148"	"24"	"0"	"1.81E-05"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPELQNLLLDDFFK"	"[R].nPELQNLLLDDFFk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"722.07336"	"2164.20554"	"2164.20543"	"0.05"	"0.00004"	"11/146"	"11"	"146"	"156188.723266602"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"91.2054"	"31499"	"31499"	"31492"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"7.5"	""	"8.7"	""	"10.6"	""	"16.3"	"13.4"	""	"1114"	"40"	"37.000"	"30.000"	"0.00573925069085981"	"19"	"0"	"6.565E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPELQNLLLDDFFK"	"[R].nPELQNLLLDDFFk.[S]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"722.07343"	"2164.20572"	"2164.20543"	"0.14"	"0.00010"	"15/146"	"15"	"146"	"1973659.51763916"	"HCD"	"MS2"	"0"	"61.7"	"100.000"	"90.7784"	"31319"	"31319"	"31313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.0"	""	"77.5"	""	"81.8"	""	"104.1"	""	"124.6"	"106.6"	""	"1125"	"44"	"37.000"	"30.000"	"0.00236114428494942"	"22"	"0"	"2.252E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMITGAAPISTPVLTFFR"	"[R].lMITGAAPISTPVLTFFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"722.08466"	"2164.23941"	"2164.24015"	"-0.34"	"-0.00024"	"5/158"	"5"	"158"	"125693.920410156"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"93.3783"	"32221"	"32221"	"32211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.8"	""	"2.7"	""	"3.8"	""	"6.0"	""	"6.4"	"5.1"	""	"840"	"26"	"36.000"	"29.000"	"0.101216028004837"	"19"	"0.0001308"	"0.0002297"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMITGAAPISTPVLTFFR"	"[R].lMITGAAPISTPVLTFFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.08557"	"2164.24216"	"2164.24015"	"0.93"	"0.00067"	"5/158"	"5"	"158"	"118712.466064453"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"93.1665"	"32122"	"32122"	"32113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	"3.9"	""	"1.9"	""	"4.3"	""	"4.3"	"6.9"	""	"819"	"3"	"36.000"	"29.000"	"22.1438895246215"	"13"	"0.001966"	"0.03097"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTDFQLNQLQGK"	"[K].kGTDFQLNQLQGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.09442"	"2164.26871"	"2164.26931"	"-0.28"	"-0.00020"	"15/122"	"15"	"122"	"1825629.85742188"	"HCD"	"MS2"	"10.01626"	"113.2"	"100.000"	"40.7952"	"11144"	"11144"	"11117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"206.4"	""	"152.2"	""	"136.3"	""	"174.2"	""	"200.7"	"202.0"	""	"619"	"22"	"34.000"	"27.000"	"0.189522446238817"	"14"	"0.0001859"	"0.0003605"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGTDFQLNQLQGK"	"[K].kGTDFQLNQLQGk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.09485"	"2164.26999"	"2164.26931"	"0.31"	"0.00023"	"16/122"	"16"	"122"	"13684786.539856"	"HCD"	"MS2"	"0"	"547.2"	"100.000"	"40.3599"	"10921"	"10921"	"10901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1096.6"	""	"744.0"	""	"683.2"	""	"857.4"	""	"887.7"	"907.1"	""	"609"	"21"	"34.000"	"27.000"	"0.230986871596387"	"14"	"0.0001859"	"0.0003256"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPEGVVDGIEIYSTK"	"[R].sLPEGVVDGIEIYSTk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"722.40698"	"2165.20639"	"2165.21057"	"-1.93"	"-0.00139"	"16/148"	"16"	"148"	"1046137.14428711"	"HCD"	"MS2"	"40.66986"	"40.6"	"100.000"	"69.6950"	"22851"	"22851"	"22826"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.9"	""	"53.7"	""	"48.1"	""	"70.3"	""	"76.8"	"67.7"	""	"1118"	"72"	"37.000"	"30.000"	"3.72744983990414E-06"	"25"	"0"	"4.278E-07"	"1.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPEGVVDGIEIYSTK"	"[R].sLPEGVVDGIEIYSTk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"722.40729"	"2165.20731"	"2165.21057"	"-1.51"	"-0.00109"	"15/148"	"15"	"148"	"898024.350891113"	"HCD"	"MS2"	"54.84838"	"35.6"	"100.000"	"69.7087"	"22908"	"22908"	"22882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.2"	""	"44.7"	""	"44.0"	""	"52.8"	""	"73.8"	"69.8"	""	"1109"	"43"	"37.000"	"30.000"	"0.00251710626432538"	"20"	"0"	"8.215E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVTQNSGVEALIHAILR"	"[K].tLVTQnSGVEALIHAILR.[A]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"722.42694"	"2165.26627"	"2165.24913"	"7.91"	"0.00571"	"10/180"	"10"	"180"	"206205.474914551"	"HCD"	"MS2"	"31.82164"	"8.1"	"100.000"	"84.1013"	"28718"	"28718"	"28692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.7"	""	"12.5"	""	"12.8"	""	"10.9"	""	"15.5"	"16.4"	""	"646"	"28"	"35.000"	"28.000"	"0.0561309667686048"	"14"	"7.476E-05"	"0.000189"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"722.43494"	"2165.29026"	"2165.29458"	"-1.99"	"-0.00144"	"11/176"	"11"	"176"	"138187.519592285"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"87.1838"	"30016"	"30016"	"29991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"6.9"	""	"16.1"	""	"11.6"	""	"12.8"	"10.6"	""	"448"	"39"	"33.000"	"26.000"	"0.00261365354221656"	"18"	"0.0001308"	"0.0002379"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1083.14941"	"2165.29155"	"2165.29458"	"-1.40"	"-0.00151"	"6/176"	"6"	"176"	"73743.3272094727"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"86.6366"	"29794"	"29794"	"29773"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	""	""	"5.3"	""	"7.0"	""	"6.8"	"8.1"	""	"446"	"10"	"33.000"	"26.000"	"2.47345983803515"	"13"	"0.004291"	"0.1113"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.6977"	"0.0000"	"1"	"1"	"1"	"722.43542"	"2165.29172"	"2165.29458"	"-1.32"	"-0.00095"	"12/176"	"12"	"176"	"124101.899169922"	"HCD"	"MS2"	"62.08772"	"6.3"	"100.000"	"87.0746"	"29920"	"29920"	"29900"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"6.8"	""	"12.1"	""	"10.6"	""	"12.2"	"8.2"	""	"440"	"43"	"33.000"	"26.000"	"0.00118692336953328"	""	"0.0001308"	"0.0002293"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8830"	"0.0000"	"1"	"1"	"1"	"1083.14954"	"2165.29180"	"2165.29458"	"-1.28"	"-0.00139"	"18/176"	"18"	"176"	"772518.018493652"	"HCD"	"MS2"	"0"	"46.5"	"100.000"	"86.2908"	"29655"	"29655"	"29638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.4"	""	"53.3"	""	"74.2"	""	"80.7"	"1.7"	"80.3"	"80.6"	""	"440"	"94"	"33.000"	"26.000"	"9.44980138882751E-09"	""	"0"	"1.187E-06"	"1.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"4"	"4"	"0.7250"	"0.0000"	"1"	"1"	"1"	"542.07867"	"2165.29287"	"2165.29458"	"-0.79"	"-0.00043"	"12/176"	"12"	"176"	"457476.22845459"	"HCD"	"MS2"	"7.257398"	"10.2"	"100.000"	"86.1728"	"29607"	"29607"	"29586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.8"	""	"10.7"	""	"17.1"	""	"16.0"	""	"19.0"	"21.2"	""	"430"	"40"	"33.000"	"26.000"	"0.00221023504097192"	"26"	"0"	"0.000154"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"722.43585"	"2165.29300"	"2165.29458"	"-0.73"	"-0.00052"	"10/176"	"10"	"176"	"110011.401550293"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"87.4811"	"30136"	"30136"	"30116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"2.7"	""	"9.7"	""	"6.9"	""	"11.0"	"9.0"	""	"430"	"28"	"33.000"	"26.000"	"0.0373627178181116"	"16"	"0.0001889"	"0.0008893"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"1083.15015"	"2165.29302"	"2165.29458"	"-0.72"	"-0.00078"	"12/176"	"12"	"176"	"200777.497558594"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"86.0064"	"29540"	"29540"	"29513"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.4"	""	"13.9"	""	"13.3"	""	"20.4"	""	"26.0"	"19.8"	""	"432"	"45"	"33.000"	"26.000"	"0.000743795850448811"	"16"	"0.0001889"	"0.0006268"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"722.43591"	"2165.29319"	"2165.29458"	"-0.64"	"-0.00046"	"18/176"	"18"	"176"	"2290365.33227539"	"HCD"	"MS2"	"15.94431"	"57.4"	"100.000"	"85.8755"	"29435"	"29435"	"29416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"90.2"	""	"69.2"	""	"81.7"	""	"107.4"	""	"97.1"	"101.0"	""	"432"	"53"	"33.000"	"26.000"	"0.000104100724287027"	"18"	"0"	"3.609E-06"	"1.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"1083.15027"	"2165.29326"	"2165.29458"	"-0.61"	"-0.00066"	"19/176"	"19"	"176"	"847992.395202637"	"HCD"	"MS2"	"0"	"52.3"	"100.000"	"86.2112"	"29570"	"29570"	"29553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.2"	""	"59.6"	""	"72.2"	""	"98.4"	""	"91.0"	"90.7"	""	"432"	"84"	"33.000"	"26.000"	"8.08078870667636E-08"	"23"	"0"	"1.976E-06"	"1.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.9077"	"0.0000"	"1"	"1"	"1"	"722.43610"	"2165.29374"	"2165.29458"	"-0.39"	"-0.00028"	"14/176"	"14"	"176"	"1512341.13323975"	"HCD"	"MS2"	"9.181606"	"35.9"	"100.000"	"85.9141"	"29502"	"29502"	"29483"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.9"	""	"44.6"	""	"45.6"	""	"69.8"	""	"60.0"	"66.0"	""	"431"	"65"	"33.000"	"26.000"	"6.79903496337231E-06"	"22"	"0"	"1.065E-06"	"1.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"722.43610"	"2165.29374"	"2165.29458"	"-0.39"	"-0.00028"	"16/176"	"16"	"176"	"6290707.21582031"	"HCD"	"MS2"	"3.482345"	"117.9"	"96.820"	"86.4867"	"29734"	"29734"	"29719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.3"	""	"144.9"	""	"163.2"	""	"217.9"	"5.1"	"203.7"	"188.5"	""	"431"	"70"	"33.000"	"26.000"	"2.22560082941581E-06"	"23"	"0"	"3.386E-07"	"1.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"4"	"4"	"0.8846"	"0.0000"	"1"	"1"	"1"	"542.07904"	"2165.29433"	"2165.29458"	"-0.11"	"-0.00006"	"12/176"	"12"	"176"	"529326.694885254"	"HCD"	"MS2"	"10.6914"	"10.8"	"100.000"	"86.1603"	"29549"	"29549"	"29526"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.3"	""	"9.5"	""	"12.7"	""	"20.4"	""	"22.1"	"21.0"	""	"428"	"52"	"33.000"	"26.000"	"0.000141388397873626"	"22"	"0"	"2.673E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.43634"	"2165.29447"	"2165.29458"	"-0.05"	"-0.00004"	"7/176"	"7"	"176"	"110084.4453125"	"HCD"	"MS2"	"11.09733"	"4.8"	"100.000"	"87.3993"	"30052"	"30052"	"30029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"4.8"	""	"10.3"	""	"4.1"	""	"14.8"	"8.2"	""	"428"	"30"	"33.000"	"26.000"	"0.0239559707061971"	"14"	"0.0001889"	"0.0006219"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"722.43634"	"2165.29447"	"2165.29458"	"-0.05"	"-0.00004"	"16/176"	"16"	"176"	"431393.302429199"	"HCD"	"MS2"	"7.706421"	"14.1"	"100.000"	"86.8121"	"29865"	"29865"	"29846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.4"	""	"15.8"	""	"23.0"	""	"24.6"	""	"26.3"	"26.7"	""	"428"	"38"	"33.000"	"26.000"	"0.00327652716799955"	"17"	"0"	"1.983E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.43634"	"2165.29447"	"2165.29458"	"-0.05"	"-0.00004"	"14/176"	"14"	"176"	"382837.987243652"	"HCD"	"MS2"	"6.460468"	"11.9"	"100.000"	"86.7675"	"29795"	"29795"	"29777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.1"	""	"14.1"	""	"19.3"	""	"21.8"	"1.6"	"20.7"	"19.0"	""	"428"	"44"	"33.000"	"26.000"	"0.000927713279749312"	"16"	"0"	"1.189E-05"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"1083.15112"	"2165.29497"	"2165.29458"	"0.18"	"0.00020"	"13/176"	"13"	"176"	"169158.374572754"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"85.9291"	"29457"	"29457"	"29432"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.4"	""	"11.3"	""	"13.9"	""	"22.5"	""	"22.4"	"14.8"	""	"426"	"42"	"33.000"	"26.000"	"0.00132245104291004"	"18"	"0.0001889"	"0.0004891"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"1083.15125"	"2165.29521"	"2165.29458"	"0.29"	"0.00032"	"8/176"	"8"	"176"	"87760.5874633789"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"86.5225"	"29696"	"29696"	"29673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"7.3"	""	"7.2"	""	"7.9"	""	"8.0"	"10.8"	""	"428"	"15"	"33.000"	"26.000"	"0.608714676993854"	"18"	"0.00103"	"0.01115"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.9636"	"0.0000"	"1"	"1"	"1"	"722.43701"	"2165.29648"	"2165.29458"	"0.88"	"0.00064"	"15/176"	"15"	"176"	"3664303.11688232"	"HCD"	"MS2"	"0.4201582"	"80.9"	"100.000"	"86.4672"	"29674"	"29674"	"29657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.7"	""	"97.7"	""	"123.9"	""	"145.0"	"0.4"	"150.9"	"133.3"	""	"415"	"55"	"33.000"	"26.000"	"6.51655553979315E-05"	"18"	"0"	"2.368E-06"	"1.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"722.43750"	"2165.29795"	"2165.29458"	"1.56"	"0.00112"	"16/176"	"16"	"176"	"19418356.3656006"	"HCD"	"MS2"	"0.2583025"	"178.6"	"47.348"	"86.2123"	"29623"	"29623"	"29612"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"276.8"	""	"218.7"	""	"247.5"	""	"333.5"	""	"315.3"	"301.9"	""	"404"	"55"	"33.000"	"26.000"	"5.83917336237826E-05"	"22"	"0"	"8.446E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGLGPLNIPLLADVTK"	"[K].eGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.8806"	"0.0000"	"1"	"1"	"1"	"722.43848"	"2165.30088"	"2165.29458"	"2.91"	"0.00210"	"17/176"	"17"	"176"	"20806888.9520264"	"HCD"	"MS2"	"0.1378087"	"172.9"	"40.986"	"86.1720"	"29554"	"29554"	"29537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"248.1"	""	"219.8"	"2.5"	"243.7"	""	"318.4"	""	"312.3"	"295.8"	""	"386"	"67"	"32.000"	"25.000"	"3.59382817375934E-06"	"25"	"0"	"1.554E-06"	"1.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQMPTETLQELLDLHR"	"[K].iQMPTETLQELLDLHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"3"	"3"	"0.8361"	"0.0000"	"1"	"1"	"1"	"722.73065"	"2166.17740"	"2166.17900"	"-0.74"	"-0.00053"	"17/164"	"17"	"164"	"1000601.89483643"	"HCD"	"MS2"	"18.92995"	"20.0"	"100.000"	"78.6363"	"26489"	"26489"	"26465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.0"	""	"20.5"	""	"28.3"	""	"31.3"	""	"41.6"	"45.0"	""	"1225"	"61"	"37.000"	"30.000"	"4.82065546188248E-05"	"26"	"0"	"1.897E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQMPTETLQELLDLHR"	"[K].iQMPTETLQELLDLHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"722.73077"	"2166.17777"	"2166.17900"	"-0.57"	"-0.00041"	"13/164"	"13"	"164"	"915897.559509277"	"HCD"	"MS2"	"76.37237"	"20.7"	"100.000"	"78.5525"	"26506"	"26506"	"26479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.4"	""	"28.9"	""	"24.7"	""	"40.6"	""	"37.3"	"42.5"	""	"1218"	"50"	"37.000"	"30.000"	"0.00056184599913725"	"25"	"0.0001308"	"0.0002203"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQmFDAk.[N]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.1333"	"0.0000"	"1"	"1"	"1"	"722.73358"	"2166.18619"	"2166.18806"	"-0.86"	"-0.00062"	"16/144"	"16"	"144"	"2123092.23352051"	"HCD"	"MS2"	"1.61"	"63.9"	"100.000"	"74.6999"	"24945"	"24945"	"24927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.2"	""	"67.7"	""	"88.1"	""	"82.1"	"2.1"	"125.3"	"131.2"	""	"1188"	"45"	"37.000"	"30.000"	"0.00172102209109459"	""	"0"	"1.877E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQmFDAk.[N]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"722.73364"	"2166.18637"	"2166.18806"	"-0.78"	"-0.00056"	"14/144"	"14"	"144"	"2771705.07006836"	"HCD"	"MS2"	"19.96905"	"87.9"	"100.000"	"60.3941"	"19114"	"19114"	"19091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.2"	""	"95.4"	""	"102.0"	""	"190.2"	"0.8"	"172.0"	"155.5"	""	"1189"	"48"	"37.000"	"30.000"	"0.00103074647666484"	""	"0.0001889"	"0.0004425"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ALTVPELTQQMFDSK"	"[R].aLTVPELTQQMFDSk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.0286"	"0.0000"	"1"	"1"	"1"	"722.73425"	"2166.18821"	"2166.18806"	"0.07"	"0.00005"	"14/146"	"14"	"146"	"2109980.68292236"	"HCD"	"MS2"	"6.001868"	"61.4"	"100.000"	"74.7140"	"24899"	"24899"	"24881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.7"	""	"67.6"	""	"75.2"	""	"80.4"	""	"123.3"	"136.5"	""	"1168"	"35"	"37.000"	"30.000"	"0.0188544056708018"	"15"	"0"	"1.179E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQmFDAk.[N]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0286"	"2"	"2"	"2"	"722.73425"	"2166.18821"	"2166.18806"	"0.07"	"0.00005"	"14/144"	"14"	"144"	"2109980.68292236"	"HCD"	"MS2"	"6.001868"	"61.4"	"100.000"	"74.7140"	"24899"	"24899"	"24881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.7"	""	"67.6"	""	"75.2"	""	"80.4"	""	"123.3"	"136.5"	""	"1168"	"34"	"37.000"	"30.000"	"0.0256692303415689"	"15"	"0"	"1.15E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDSK"	"[R].aLTVPELTQQMFDSk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.4091"	"0.0000"	"1"	"1"	"1"	"722.73425"	"2166.18821"	"2166.18806"	"0.07"	"0.00005"	"14/146"	"14"	"146"	"4035372.22418213"	"HCD"	"MS2"	"27.60042"	"104.1"	"100.000"	"74.4002"	"24771"	"24771"	"24753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"179.5"	""	"130.1"	""	"129.7"	""	"150.2"	""	"205.3"	"194.1"	""	"1168"	"44"	"37.000"	"30.000"	"0.00218480583550879"	""	"0"	"1.37E-05"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDAK"	"[R].aLTVPELTQQmFDAk.[N]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"2"	"2"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q4QRB4; Q6P9T8"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.5593"	"0.0000"	"1"	"1"	"1"	"722.73431"	"2166.18839"	"2166.18806"	"0.15"	"0.00011"	"14/144"	"14"	"144"	"2561717.11437988"	"HCD"	"MS2"	"25.52379"	"79.9"	"100.000"	"60.2699"	"19010"	"19010"	"18985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.9"	""	"77.0"	""	"95.0"	""	"185.1"	"0.1"	"158.4"	"134.3"	""	"1167"	"59"	"37.000"	"30.000"	"7.04759372784807E-05"	""	"0"	"5.093E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTVPELTQQMFDSK"	"[R].aLTVPELTQQMFDSk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"2"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.4722"	"0.0000"	"1"	"1"	"1"	"722.73474"	"2166.18967"	"2166.18806"	"0.74"	"0.00054"	"16/146"	"16"	"146"	"4102804.97589111"	"HCD"	"MS2"	"24.00932"	"104.8"	"100.000"	"74.3816"	"24816"	"24816"	"24799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.4"	""	"121.0"	""	"133.4"	""	"153.1"	""	"219.8"	"187.6"	""	"1156"	"36"	"37.000"	"30.000"	"0.0137698065328932"	""	"0"	"2.264E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEGNRPTNSIVFTK"	"[K].vFEGNRPTNSIVFTk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.08002"	"2167.22550"	"2167.22756"	"-0.95"	"-0.00069"	"10/154"	"10"	"154"	"1828715.05102539"	"HCD"	"MS2"	"0"	"129.0"	"100.000"	"44.5913"	"12639"	"12639"	"12616"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.6"	""	"188.2"	""	"206.4"	""	"174.0"	"1.9"	"190.5"	"210.9"	""	"951"	"23"	"36.000"	"29.000"	"0.225502063991246"	"14"	"0"	"3.376E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEGNRPTNSIVFTK"	"[K].vFEGNRPTNSIVFTk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"723.08057"	"2167.22715"	"2167.22756"	"-0.19"	"-0.00014"	"8/154"	"8"	"154"	"7029768.78405762"	"HCD"	"MS2"	"0"	"424.4"	"100.000"	"44.5617"	"12677"	"12677"	"12659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"850.6"	""	"624.3"	""	"611.8"	""	"614.8"	""	"625.3"	"687.0"	""	"956"	"11"	"36.000"	"29.000"	"3.68491858212797"	"15"	"0"	"9.474E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEGNRPTNSIVFTK"	"[K].vFEGNRPTNSIVFTk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"723.08130"	"2167.22934"	"2167.22756"	"0.82"	"0.00059"	"6/154"	"6"	"154"	"4516030.12121582"	"HCD"	"MS2"	"9.187927"	"288.8"	"100.000"	"44.2682"	"12508"	"12508"	"12486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"529.7"	""	"445.1"	""	"440.8"	""	"402.3"	""	"439.0"	"476.8"	""	"939"	"5"	"36.000"	"29.000"	"14.4755674264207"	"14"	"0.0001889"	"0.0009063"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTILNGASQDLIPQLK"	"[K].vTILNGASQDLIPQLk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"0"	"3"	"3"	"0.9552"	"0.0000"	"1"	"1"	"1"	"723.43903"	"2168.30252"	"2168.30547"	"-1.36"	"-0.00098"	"16/158"	"16"	"158"	"1158535.76470947"	"HCD"	"MS2"	"4.352667"	"38.3"	"100.000"	"73.1893"	"24329"	"24329"	"24303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.3"	""	"53.6"	""	"55.7"	""	"63.6"	""	"72.1"	"66.8"	""	"417"	"67"	"33.000"	"26.000"	"4.45765095661215E-06"	"19"	"0"	"2.224E-06"	"1.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTILNGASQDLIPQLK"	"[K].vTILNGASQDLIPQLk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"0"	"3"	"3"	"0.8986"	"0.0000"	"1"	"1"	"1"	"723.43933"	"2168.30344"	"2168.30547"	"-0.94"	"-0.00068"	"15/158"	"15"	"158"	"1126567.90545654"	"HCD"	"MS2"	"15.78306"	"38.1"	"100.000"	"73.2259"	"24292"	"24292"	"24273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.5"	""	"57.1"	""	"54.5"	""	"57.8"	"1.0"	"58.3"	"70.2"	""	"405"	"69"	"33.000"	"26.000"	"2.27732507228303E-06"	"24"	"0"	"2.095E-06"	"1.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQALAAAVVPSAQTLK"	"[R].eLQALAAAVVPSAQTLk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.44000"	"2168.30545"	"2168.30547"	"-0.01"	"-0.00001"	"18/184"	"18"	"184"	"2055730.75927734"	"HCD"	"MS2"	"35.52489"	"43.3"	"100.000"	"73.9991"	"24659"	"24659"	"24639"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.9"	""	"70.3"	""	"60.2"	""	"65.2"	"0.7"	"77.5"	"71.5"	""	"397"	"36"	"32.000"	"25.000"	"0.00472890414667701"	"15"	"0"	"3.991E-06"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQALAAAVVPSAQTLK"	"[R].eLQALAAAVVPSAQTLk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.44012"	"2168.30582"	"2168.30547"	"0.16"	"0.00012"	"17/184"	"17"	"184"	"1983531.01409912"	"HCD"	"MS2"	"33.61544"	"43.5"	"100.000"	"74.0103"	"24612"	"24612"	"24593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.8"	""	"66.7"	""	"61.2"	""	"64.3"	""	"82.2"	"80.3"	""	"397"	"37"	"32.000"	"25.000"	"0.00382613695268401"	"15"	"0"	"7.152E-06"	"1.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDMAIFITMNPGYAGR"	"[K].vSPDMAIFITMNPGYAGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"723.70508"	"2169.10068"	"2169.10340"	"-1.25"	"-0.00091"	"15/164"	"15"	"164"	"614925.922668457"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"77.8277"	"26159"	"26159"	"26137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.2"	""	"15.6"	""	"20.8"	""	"21.9"	""	"25.6"	"23.1"	""	"1155"	"46"	"37.000"	"30.000"	"0.00131386876627087"	"21"	"0"	"2.268E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDMAIFITMNPGYAGR"	"[K].vSPDMAIFITMNPGYAGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"723.70508"	"2169.10068"	"2169.10340"	"-1.25"	"-0.00091"	"13/164"	"13"	"164"	"679791.099487305"	"HCD"	"MS2"	"22.77899"	"12.5"	"100.000"	"77.7805"	"26191"	"26191"	"26165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.9"	""	"15.0"	""	"19.4"	""	"18.5"	"1.2"	"25.5"	"22.1"	""	"1155"	"55"	"37.000"	"30.000"	"0.000183464477580024"	"22"	"0"	"6.78E-06"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGVPFLETSAK"	"[K].eFADSLGVPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"723.72998"	"2169.17539"	"2169.18436"	"-4.13"	"-0.00299"	"14/146"	"14"	"146"	"1158073.2166748"	"HCD"	"MS2"	"6.496216"	"41.1"	"100.000"	"75.8635"	"25368"	"25368"	"25345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.8"	""	"57.6"	""	"47.7"	""	"70.1"	""	"80.5"	"72.6"	""	"1275"	"56"	"38.000"	"31.000"	"0.000167293932140758"	"21"	"0"	"2.606E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGVPFLETSAK"	"[K].eFADSLGVPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1085.09460"	"2169.18193"	"2169.18436"	"-1.12"	"-0.00121"	"15/146"	"15"	"146"	"273343.415222168"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"76.0991"	"25464"	"25464"	"25441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.1"	""	"18.4"	""	"23.1"	""	"32.7"	""	"39.4"	"32.8"	""	"1268"	"43"	"38.000"	"31.000"	"0.00326654960664833"	"15"	"0"	"2.265E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGVPFLETSAK"	"[K].eFADSLGVPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.8525"	"0.0000"	"1"	"1"	"1"	"723.73230"	"2169.18235"	"2169.18436"	"-0.93"	"-0.00067"	"15/146"	"15"	"146"	"1788835.04559326"	"HCD"	"MS2"	"14.45673"	"51.5"	"100.000"	"75.8512"	"25415"	"25415"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.0"	""	"51.0"	""	"64.0"	""	"95.6"	"0.3"	"103.5"	"98.6"	""	"1266"	"61"	"38.000"	"31.000"	"5.42504956030824E-05"	"25"	"0"	"5.849E-06"	"1.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGVPFLETSAK"	"[K].eFADSLGVPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"1085.09485"	"2169.18242"	"2169.18436"	"-0.89"	"-0.00097"	"7/146"	"7"	"146"	"175049.006408691"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"76.0995"	"25512"	"25512"	"25487"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.9"	""	"18.9"	""	"15.0"	""	"20.7"	""	"21.8"	"25.2"	""	"1267"	"40"	"38.000"	"31.000"	"0.0059944124172523"	"16"	"7.476E-05"	"0.0002004"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGVPFLETSAK"	"[K].eFADSLGVPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.73322"	"2169.18509"	"2169.18436"	"0.34"	"0.00025"	"16/146"	"16"	"146"	"2356578.25683594"	"HCD"	"MS2"	"0.4826345"	"68.7"	"100.000"	"76.1745"	"25491"	"25491"	"25473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.4"	""	"80.8"	""	"91.8"	""	"116.2"	"0.5"	"136.6"	"128.3"	""	"1250"	"68"	"37.000"	"30.000"	"1.00202836918128E-05"	"17"	"0"	"1.532E-05"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGVPFLETSAK"	"[K].eFADSLGVPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"723.73352"	"2169.18601"	"2169.18436"	"0.76"	"0.00055"	"14/146"	"14"	"146"	"1816796.9909668"	"HCD"	"MS2"	"3.393501"	"55.1"	"100.000"	"76.1577"	"25536"	"25536"	"25519"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.6"	""	"60.5"	""	"67.3"	""	"100.1"	""	"103.8"	"112.2"	""	"1236"	"60"	"37.000"	"30.000"	"6.29489477817444E-05"	"25"	"0"	"1.274E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEMLTHDIAk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"724.07758"	"2170.21817"	"2170.21936"	"-0.55"	"-0.00040"	"11/130"	"11"	"130"	"113758.756591797"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"95.9868"	"33015"	"33015"	"33007"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.0"	""	"5.5"	""	"8.9"	""	"4.6"	""	"9.9"	"13.9"	""	"1031"	"42"	"37.000"	"30.000"	"0.00355818618879645"	"21"	"0.0001889"	"0.0004786"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEMLTHDIAk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.07764"	"2170.21836"	"2170.21936"	"-0.46"	"-0.00034"	"10/130"	"10"	"130"	"123551.672241211"	"HCD"	"MS2"	"23.0314"	"5.9"	"100.000"	"95.7161"	"32934"	"32934"	"32928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"9.1"	""	"8.4"	""	"6.3"	""	"11.4"	"13.9"	""	"1031"	"29"	"37.000"	"30.000"	"0.0677998400995099"	"14"	"0.0001889"	"0.0004333"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEMLTHDIAk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.07825"	"2170.22019"	"2170.21936"	"0.38"	"0.00028"	"6/130"	"6"	"130"	"146616.252502441"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"96.2450"	"33088"	"33088"	"33084"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.7"	""	"5.2"	""	"10.1"	""	"7.0"	""	"7.1"	"10.6"	""	"1015"	"15"	"37.000"	"30.000"	"1.48400733175549"	"13"	"0.001966"	"0.03014"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEMLTHDIAk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.07825"	"2170.22019"	"2170.21936"	"0.38"	"0.00028"	"8/130"	"8"	"130"	"120255.358337402"	"HCD"	"MS2"	"3.716624"	"3.9"	"100.000"	"95.4172"	"32852"	"32852"	"32846"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.5"	""	"2.7"	""	"6.7"	""	"7.3"	""	"6.0"	"7.8"	""	"1015"	"14"	"37.000"	"30.000"	"1.83838321696474"	"13"	"0.0006037"	"0.00451"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEMLTHDIAk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"724.07861"	"2170.22129"	"2170.21936"	"0.89"	"0.00064"	"9/130"	"9"	"130"	"166354.686584473"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"96.5258"	"33170"	"33170"	"33166"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"6.8"	""	"7.4"	""	"6.5"	""	"11.2"	"13.1"	""	"1009"	"22"	"37.000"	"30.000"	"0.349833319135359"	"17"	"0.0001859"	"0.0003207"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPHNNFFFFDGMK"	"[R].dPPHNNFFFFDGMk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.36334"	"2171.07547"	"2171.07845"	"-1.37"	"-0.00099"	"13/142"	"13"	"142"	"3371871.87689209"	"HCD"	"MS2"	"25.60565"	"120.3"	"100.000"	"61.5632"	"19591"	"19591"	"19571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.1"	""	"180.0"	""	"197.4"	""	"151.8"	"0.5"	"211.6"	"219.5"	""	"1029"	"27"	"37.000"	"30.000"	"0.0929791087832621"	"14"	"0"	"3.978E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPHNNFFFFDGMK"	"[R].dPPHNNFFFFDGMk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.36511"	"2171.08078"	"2171.07845"	"1.07"	"0.00078"	"5/142"	"5"	"142"	"2924896.81048584"	"HCD"	"MS2"	"20.5305"	"107.5"	"100.000"	"61.4088"	"19475"	"19475"	"19449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.1"	""	"174.3"	""	"160.1"	""	"122.9"	""	"190.9"	"204.2"	""	"1075"	"17"	"37.000"	"30.000"	"1.11526601563201"	"14"	"0"	"0.0001208"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVVSYYNFYNMAK"	"[K].dVVVSYYNFYNMAk.[L]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"724.37994"	"2171.12528"	"2171.12473"	"0.25"	"0.00018"	"11/124"	"11"	"124"	"536202.858642578"	"HCD"	"MS2"	"67.01778"	"29.6"	"100.000"	"70.5141"	"23185"	"23185"	"23155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.4"	""	"41.7"	""	"49.0"	""	"42.8"	""	"48.6"	"58.5"	""	"1306"	"40"	"38.000"	"31.000"	"0.00665140176399338"	"21"	"0.0001308"	"0.0002907"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFAFVTFDDHDTVDK"	"[R].gFAFVTFDDHDTVDk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.71173"	"2172.12064"	"2172.10136"	"8.88"	"0.00643"	"15/128"	"15"	"128"	"6826760.66412354"	"HCD"	"MS2"	"4.773256"	"158.7"	"100.000"	"57.2764"	"17791"	"17791"	"17771"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.0"	""	"145.1"	""	"133.3"	""	"329.2"	""	"384.3"	"356.4"	""	"1253"	"15"	"37.000"	"30.000"	"2.20760350708118"	"13"	"0.0001308"	"0.0002994"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFAFVTFDDHDTVDK"	"[R].gFAFVTFDDHDTVDk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.71252"	"2172.12302"	"2172.10136"	"9.97"	"0.00722"	"15/128"	"15"	"128"	"7221466.48260498"	"HCD"	"MS2"	"6.486342"	"149.2"	"100.000"	"57.4431"	"17913"	"17913"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.7"	""	"145.1"	""	"133.1"	""	"303.8"	""	"335.4"	"354.0"	""	"1276"	"14"	"38.000"	"31.000"	"2.75943824200336"	"13"	"0.0001889"	"0.0004042"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPIYSEEIVDMYK"	"[K].nLPIYSEEIVDMYk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"724.72650"	"2172.16495"	"2172.16626"	"-0.60"	"-0.00044"	"13/140"	"13"	"140"	"725887.65814209"	"HCD"	"MS2"	"26.48356"	"34.3"	"100.000"	"73.5952"	"24443"	"24443"	"24417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.8"	""	"47.7"	""	"48.2"	""	"48.5"	""	"66.9"	"65.2"	""	"1230"	"54"	"37.000"	"30.000"	"0.000271565825122288"	"18"	"0"	"4.633E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPIYSEEIVDMYK"	"[K].nLPIYSEEIVDMYk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.72711"	"2172.16678"	"2172.16626"	"0.24"	"0.00017"	"13/140"	"13"	"140"	"740116.434875488"	"HCD"	"MS2"	"0"	"37.3"	"100.000"	"73.5400"	"24472"	"24472"	"24447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.5"	""	"51.4"	""	"48.1"	""	"65.3"	""	"67.0"	"68.3"	""	"1226"	"33"	"37.000"	"30.000"	"0.0306521169940888"	"15"	"0"	"4.324E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDPSLFPPVPLFSGVPSR"	"[K].mDPSLFPPVPLFSGVPSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.72882"	"2172.17191"	"2172.17246"	"-0.25"	"-0.00018"	"9/166"	"9"	"166"	"143242.681396484"	"HCD"	"MS2"	"6.400727"	"2.7"	"100.000"	"89.8871"	"31028"	"31028"	"31022"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"3.4"	""	"3.2"	""	"4.8"	""	"3.7"	"7.1"	""	"1222"	"18"	"37.000"	"30.000"	"0.871046239690937"	"14"	"0.0001889"	"0.0007161"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDPSLFPPVPLFSGVPSR"	"[K].mDPSLFPPVPLFSGVPSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.72919"	"2172.17301"	"2172.17246"	"0.25"	"0.00018"	"9/166"	"9"	"166"	"193256.09967041"	"HCD"	"MS2"	"8.34332"	"3.5"	"100.000"	"89.6039"	"30922"	"30922"	"30908"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	"3.9"	""	"9.4"	""	"4.2"	""	"6.2"	"7.2"	""	"1211"	"13"	"37.000"	"30.000"	"2.71090405678788"	"13"	"0.0004166"	"0.002468"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDPSLFPPVPLFSGVPSR"	"[K].mDPSLFPPVPLFSGVPSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.72974"	"2172.17466"	"2172.17246"	"1.01"	"0.00073"	"13/166"	"13"	"166"	"252396.41394043"	"HCD"	"MS2"	"6.898314"	"3.5"	"100.000"	"89.5093"	"30847"	"30847"	"30830"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.8"	""	"4.2"	""	"5.7"	""	"4.4"	""	"5.3"	"8.7"	""	"1205"	"17"	"37.000"	"30.000"	"1.27925478835513"	"14"	"0.0001889"	"0.0004934"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVLPHFNVLFDGLSK"	"[R].gAVLPHFNVLFDGLSk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.75739"	"2172.25760"	"2172.25813"	"-0.24"	"-0.00018"	"12/142"	"12"	"142"	"805674.108520508"	"HCD"	"MS2"	"23.36301"	"32.9"	"100.000"	"71.8434"	"23728"	"23728"	"23699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.4"	""	"40.8"	""	"49.6"	""	"58.6"	""	"65.8"	"63.4"	""	"752"	"18"	"35.000"	"28.000"	"0.582355048711093"	"14"	"0"	"6.887E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPGALVIPFSGALELK"	"[K].sDPGALVIPFSGALELk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.76068"	"2172.26749"	"2172.26803"	"-0.25"	"-0.00018"	"13/156"	"13"	"156"	"246960.443725586"	"HCD"	"MS2"	"4.778908"	"11.0"	"100.000"	"83.7050"	"28556"	"28556"	"28538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.2"	""	"17.7"	""	"18.8"	""	"17.4"	""	"14.1"	"16.0"	""	"668"	"39"	"35.000"	"28.000"	"0.00380843429045431"	"15"	"0"	"6.621E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPGALVIPFSGALELK"	"[K].sDPGALVIPFSGALELk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"3"	"3"	"0.9811"	"0.0000"	"1"	"1"	"1"	"724.76105"	"2172.26859"	"2172.26803"	"0.26"	"0.00019"	"14/156"	"14"	"156"	"532801.993469238"	"HCD"	"MS2"	"41.2251"	"17.8"	"100.000"	"83.3710"	"28420"	"28420"	"28398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.3"	""	"27.9"	""	"27.3"	""	"27.1"	""	"27.7"	"29.0"	""	"656"	"53"	"35.000"	"28.000"	"0.000164011327472449"	"17"	"0"	"4.081E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPGALVIPFSGALELK"	"[K].sDPGALVIPFSGALELk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"724.76135"	"2172.26950"	"2172.26803"	"0.68"	"0.00049"	"10/156"	"10"	"156"	"161267.293701172"	"HCD"	"MS2"	"7.3593"	"8.1"	"100.000"	"83.7898"	"28642"	"28642"	"28615"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.3"	""	"7.7"	""	"17.7"	""	"12.4"	""	"12.6"	"15.8"	""	"647"	"29"	"35.000"	"28.000"	"0.0376594770514294"	"16"	"0.0001889"	"0.0005085"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPGALVIPFSGALELK"	"[K].sDPGALVIPFSGALELk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"724.76154"	"2172.27005"	"2172.26803"	"0.93"	"0.00068"	"14/156"	"14"	"156"	"526049.720031738"	"HCD"	"MS2"	"29.12065"	"17.0"	"100.000"	"83.4118"	"28488"	"28488"	"28461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.9"	""	"22.4"	""	"24.8"	""	"29.0"	""	"25.2"	"28.0"	""	"644"	"45"	"35.000"	"28.000"	"0.000963509212987836"	"18"	"0"	"2.775E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDAFLASESLIK"	"[K].kYDAFLASESLIk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"1"	"4"	"4"	"0.9333"	"0.0000"	"1"	"1"	"3"	"543.82642"	"2172.28383"	"2172.28832"	"-2.06"	"-0.00112"	"9/134"	"9"	"134"	"5067275.93536377"	"HCD"	"MS2"	"23.34584"	"110.0"	"100.000"	"58.9896"	"18541"	"18541"	"18517"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.9"	""	"155.4"	""	"160.6"	""	"174.3"	"0.3"	"196.0"	"194.6"	""	"538"	"15"	"34.000"	"27.000"	"0.854579125004789"	"15"	"0.0001308"	"0.0002673"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDAFLASESLIK"	"[K].kYDAFLASESLIk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"1"	"4"	"4"	"0.6111"	"0.0000"	"1"	"1"	"3"	"543.82727"	"2172.28725"	"2172.28832"	"-0.49"	"-0.00027"	"6/134"	"6"	"134"	"4745303.63989258"	"HCD"	"MS2"	"32.68479"	"105.3"	"100.000"	"58.8152"	"18421"	"18421"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"144.1"	""	"148.8"	""	"153.1"	""	"168.9"	"2.1"	"191.8"	"188.6"	""	"501"	"18"	"33.000"	"26.000"	"0.36124989555698"	"20"	"0"	"7.181E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDAFLASESLIK"	"[K].kYDAFLASESLIk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"1"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"724.76733"	"2172.28745"	"2172.28832"	"-0.40"	"-0.00029"	"10/134"	"10"	"134"	"9215076.65319824"	"HCD"	"MS2"	"3.995923"	"270.4"	"100.000"	"58.9358"	"18519"	"18519"	"18501"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"444.5"	""	"383.9"	""	"397.5"	""	"435.8"	"1.9"	"448.1"	"447.6"	""	"501"	"66"	"33.000"	"26.000"	"5.95398491799533E-06"	"23"	"0"	"7.918E-07"	"1.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDAFLASESLIK"	"[K].kYDAFLASESLIk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.76788"	"2172.28910"	"2172.28832"	"0.36"	"0.00026"	"11/134"	"11"	"134"	"9602837.59655762"	"HCD"	"MS2"	"0.580023"	"346.9"	"100.000"	"58.8335"	"18428"	"18428"	"18409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"476.4"	""	"479.3"	""	"510.9"	""	"562.7"	""	"638.9"	"620.0"	""	"507"	"34"	"34.000"	"27.000"	"0.0113234290610269"	"15"	"0"	"5.985E-06"	"1.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYAVLYQPLFDK"	"[R].kYAVLYQPLFDk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.77289"	"2172.30411"	"2172.30357"	"0.25"	"0.00018"	"12/110"	"12"	"110"	"1700452.50402832"	"HCD"	"MS2"	"42.40858"	"124.9"	"100.000"	"60.1983"	"18981"	"18981"	"18953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.8"	""	"236.7"	""	"197.1"	""	"153.5"	""	"198.9"	"190.3"	""	"417"	"4"	"33.000"	"26.000"	"8.13029042220593"	"13"	"0.0003839"	"0.001987"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYAVLYQPLFDK"	"[R].kYAVLYQPLFDk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.77386"	"2172.30704"	"2172.30357"	"1.60"	"0.00116"	"11/110"	"11"	"110"	"1696028.51141357"	"HCD"	"MS2"	"28.93271"	"116.1"	"100.000"	"60.3271"	"19087"	"19087"	"19059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.9"	""	"218.8"	""	"175.0"	""	"135.2"	"0.5"	"190.9"	"178.5"	""	"403"	"4"	"33.000"	"26.000"	"8.04035178259717"	"13"	"0.0001889"	"0.0007"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDAFLASESLIK"	"[K].kYDAFLASESLIk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"1"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"543.83344"	"2172.31191"	"2172.28832"	"10.86"	"0.00590"	"6/134"	"6"	"134"	"3135033.98944092"	"HCD"	"MS2"	"37.48426"	"66.5"	"100.000"	"58.9708"	"18480"	"18480"	"18457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.3"	""	"85.2"	""	"96.0"	""	"108.2"	"1.9"	"114.6"	"123.7"	""	"358"	"17"	"32.000"	"25.000"	"0.397972470426601"	"14"	"0.0006037"	"0.004155"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDAFLASESLIK"	"[K].kYDAFLASESLIk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.83374"	"2172.31313"	"2172.28832"	"11.42"	"0.00620"	"5/134"	"5"	"134"	"2569280.82232666"	"HCD"	"MS2"	"41.46165"	"53.6"	"100.000"	"59.1455"	"18604"	"18604"	"18581"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.6"	""	"71.5"	""	"77.5"	""	"91.1"	"1.8"	"99.1"	"90.7"	""	"354"	"19"	"32.000"	"25.000"	"0.215761159009701"	"14"	"0.000494"	"0.002679"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMLNTPEDVQALVSGK"	"[K].iMLNTPEDVQALVSGk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"3"	"3"	"0.8305"	"0.0000"	"1"	"1"	"1"	"725.08221"	"2173.23209"	"2173.23026"	"0.84"	"0.00061"	"15/162"	"15"	"162"	"1476941.05749512"	"HCD"	"MS2"	"24.35247"	"48.7"	"100.000"	"74.3681"	"24758"	"24758"	"24737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.8"	""	"63.6"	""	"61.2"	""	"80.3"	"0.8"	"94.0"	"93.1"	""	"1006"	"59"	"37.000"	"30.000"	"5.74867802399255E-05"	"26"	"0"	"0.0001173"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKDIVLVAYSALGSHR"	"[K].skDIVLVAYSALGSHR.[D]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.32703"	"2174.28628"	"2174.26976"	"7.60"	"0.00413"	"13/174"	"13"	"174"	"2908869.25579834"	"HCD"	"MS2"	"0"	"72.3"	"100.000"	"53.6835"	"16327"	"16327"	"16307"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.2"	""	"92.1"	""	"104.4"	""	"129.1"	"0.4"	"127.4"	"142.3"	""	"562"	"7"	"34.000"	"27.000"	"6.0354036323068"	"13"	"0.001966"	"0.02994"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDDDTIITTLENLK"	"[R].iLDDDTIITTLENLk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"725.75568"	"2175.25248"	"2175.25244"	"0.02"	"0.00001"	"6/134"	"6"	"134"	"149733.412353516"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"97.2280"	"33385"	"33385"	"33379"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.5"	""	""	""	"4.5"	""	"8.2"	""	"9.0"	"10.3"	""	"874"	"13"	"36.000"	"29.000"	"2.35766142039111"	"14"	"0.0008453"	"0.007997"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALFEEVPELLTEAEK"	"[K].aLFEEVPELLTEAEk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"726.07605"	"2176.21360"	"2176.21532"	"-0.79"	"-0.00058"	"10/132"	"10"	"132"	"215410.628723145"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"87.3947"	"30050"	"30050"	"30029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.4"	""	"7.0"	""	"6.3"	""	"14.2"	""	"16.6"	"13.8"	""	"1139"	"13"	"37.000"	"30.000"	"2.64541449239356"	"15"	"0.0002277"	"0.001186"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALFEEVPELLTEAEK"	"[K].aLFEEVPELLTEAEk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"726.07672"	"2176.21561"	"2176.21532"	"0.13"	"0.00010"	"12/132"	"12"	"132"	"210039.904663086"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"87.4696"	"30131"	"30131"	"30116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.4"	""	"9.4"	""	"11.0"	""	"12.8"	""	"11.6"	"15.7"	""	"1144"	"23"	"37.000"	"30.000"	"0.285361926827127"	"14"	"0.0001889"	"0.0006999"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPTVFFDITADGEPLGR"	"[M].vNPTVFFDITADGEPLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1089.07349"	"2177.13970"	"2177.14400"	"-1.98"	"-0.00215"	"5/188"	"5"	"188"	"89698.3862304688"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"81.2271"	"27597"	"27597"	"27566"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	"3.3"	""	"4.1"	""	"4.2"	""	"6.2"	"4.6"	""	"1309"	"6"	"38.000"	"31.000"	"17.7790950145518"	"13"	"0.00103"	"0.0126"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPTVFFDITADGEPLGR"	"[M].vNPTVFFDITADGEPLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"1089.07422"	"2177.14116"	"2177.14400"	"-1.30"	"-0.00142"	"6/188"	"6"	"188"	"113944.253112793"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"81.2760"	"27566"	"27566"	"27536"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"9.3"	""	"6.2"	""	"8.5"	""	"10.0"	"12.7"	""	"1312"	"10"	"38.000"	"31.000"	"6.68195950563501"	"15"	"0.0008731"	"0.00913"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDFIGQSTIPWNSLK"	"[K].nDFIGQSTIPWNSLk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"726.73694"	"2178.19626"	"2178.19592"	"0.15"	"0.00011"	"16/162"	"16"	"162"	"1803065.1651001"	"HCD"	"MS2"	"4.178113"	"59.1"	"100.000"	"68.9231"	"22536"	"22536"	"22506"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.9"	""	"91.1"	""	"87.4"	""	"86.6"	""	"108.7"	"112.0"	""	"1177"	"51"	"37.000"	"30.000"	"0.000478350758762572"	"18"	"0"	"2.709E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDFIGQSTIPWNSLK"	"[K].nDFIGQSTIPWNSLk.[Q]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"726.73724"	"2178.19718"	"2178.19592"	"0.58"	"0.00042"	"15/162"	"15"	"162"	"1621095.43359375"	"HCD"	"MS2"	"0"	"54.1"	"100.000"	"68.8479"	"22556"	"22556"	"22538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.3"	""	"76.2"	""	"65.7"	""	"91.7"	""	"104.3"	"109.1"	""	"1182"	"47"	"37.000"	"30.000"	"0.00117648794334143"	"18"	"0"	"4.6E-05"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTISDHPQPIDPLLK"	"[K].fTISDHPQPIDPLLk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"727.08905"	"2179.25260"	"2179.25271"	"-0.05"	"-0.00004"	"11/144"	"11"	"144"	"5463680.00024414"	"HCD"	"MS2"	"8.751472"	"179.7"	"100.000"	"58.6797"	"18365"	"18365"	"18345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.8"	""	"230.6"	""	"235.5"	""	"266.3"	""	"352.5"	"377.9"	""	"807"	"28"	"36.000"	"29.000"	"0.0658936460975365"	"16"	"0"	"5.148E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTISDHPQPIDPLLK"	"[K].fTISDHPQPIDPLLk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.08923"	"2179.25315"	"2179.25271"	"0.20"	"0.00015"	"13/144"	"13"	"144"	"6694918.80718994"	"HCD"	"MS2"	"20.01238"	"224.0"	"100.000"	"58.8525"	"18486"	"18486"	"18469"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"324.3"	""	"266.2"	""	"287.4"	""	"330.7"	""	"430.4"	"489.5"	""	"813"	"37"	"36.000"	"29.000"	"0.00857157342947881"	"15"	"0"	"1.597E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"727.39685"	"2180.17600"	"2180.17856"	"-1.17"	"-0.00085"	"14/146"	"14"	"146"	"1011600.71380615"	"HCD"	"MS2"	"43.22214"	"40.1"	"100.000"	"69.7936"	"22891"	"22891"	"22869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.0"	""	"51.1"	""	"61.2"	""	"59.7"	""	"74.8"	"78.8"	""	"1259"	"55"	"37.000"	"31.000"	"0.000206060967426229"	"27"	"0"	"3.298E-06"	"1.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"727.39685"	"2180.17600"	"2180.17856"	"-1.17"	"-0.00085"	"10/146"	"10"	"146"	"2246385.95452881"	"HCD"	"MS2"	"21.61669"	"80.5"	"100.000"	"64.7403"	"20836"	"20836"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.7"	""	"93.6"	""	"114.6"	""	"113.8"	"4.2"	"174.0"	"156.9"	""	"1259"	"51"	"37.000"	"31.000"	"0.00046880877757382"	"20"	"0"	"2.582E-06"	"1.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9506"	"0.0000"	"1"	"1"	"1"	"1090.59216"	"2180.17705"	"2180.17856"	"-0.69"	"-0.00076"	"13/146"	"13"	"146"	"3136298.45806885"	"HCD"	"MS2"	"0"	"215.8"	"100.000"	"62.9318"	"20097"	"20097"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"250.3"	""	"201.4"	""	"213.7"	""	"395.2"	""	"523.9"	"473.2"	""	"1255"	"81"	"37.000"	"30.000"	"4.57734587684742E-07"	"21"	"0"	"1.11E-06"	"1.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.8772"	"0.0000"	"1"	"1"	"1"	"545.79974"	"2180.17714"	"2180.17856"	"-0.65"	"-0.00035"	"11/146"	"11"	"146"	"28038418.3276978"	"HCD"	"MS2"	"2.417424"	"372.3"	"100.000"	"63.0179"	"20185"	"20185"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"438.9"	""	"360.7"	""	"393.6"	""	"673.5"	""	"858.4"	"817.3"	""	"1258"	"57"	"37.000"	"30.000"	"0.000129912411800482"	"23"	"0"	"2.472E-06"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1090.59229"	"2180.17729"	"2180.17856"	"-0.58"	"-0.00063"	"5/146"	"5"	"146"	"87616.9266967773"	"HCD"	"MS2"	"100"	"5.3"	"100.000"	"64.5904"	"20775"	"20775"	"20745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.7"	""	"3.0"	""	"4.0"	""	"6.0"	""	"26.1"	"9.5"	""	"1256"	"5"	"37.000"	"30.000"	"20.6043844075039"	"13"	"0.001966"	"0.02935"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.7736"	"0.0000"	"1"	"1"	"1"	"545.79987"	"2180.17763"	"2180.17856"	"-0.43"	"-0.00023"	"17/146"	"17"	"146"	"41921969.7946777"	"HCD"	"MS2"	"0.5016254"	"118.9"	"20.601"	"63.3212"	"20309"	"20309"	"20291"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"139.3"	""	"93.9"	""	"120.8"	""	"204.3"	""	"298.5"	"277.1"	""	"1250"	"53"	"37.000"	"30.000"	"0.000317599651600351"	"28"	"0"	"1.281E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"1090.59253"	"2180.17778"	"2180.17856"	"-0.36"	"-0.00039"	"15/146"	"15"	"146"	"6356227.81152344"	"HCD"	"MS2"	"2.130692"	"417.0"	"100.000"	"63.2776"	"20292"	"20292"	"20275"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"456.7"	""	"348.0"	""	"424.0"	""	"732.0"	""	"1026.7"	"990.5"	""	"1251"	"87"	"37.000"	"30.000"	"1.3715994870617E-07"	""	"0"	"1.107E-07"	"1.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"727.39746"	"2180.17783"	"2180.17856"	"-0.34"	"-0.00024"	"12/146"	"12"	"146"	"7542186.35015869"	"HCD"	"MS2"	"0.7253277"	"155.1"	"96.421"	"63.6305"	"20436"	"20436"	"20419"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.0"	""	"149.5"	""	"167.4"	""	"261.4"	"2.9"	"382.9"	"339.8"	""	"1265"	"52"	"38.000"	"31.000"	"0.000440616270175061"	"26"	"0"	"2.505E-06"	"1.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"727.39758"	"2180.17820"	"2180.17856"	"-0.17"	"-0.00012"	"17/146"	"17"	"146"	"2270264.78729248"	"HCD"	"MS2"	"7.318433"	"64.5"	"100.000"	"63.9624"	"20571"	"20571"	"20547"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.4"	""	"61.0"	""	"76.8"	""	"111.6"	"2.8"	"139.0"	"141.3"	""	"1259"	"56"	"37.000"	"31.000"	"0.000150659226865719"	"20"	"0"	"2.065E-06"	"1.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"727.39758"	"2180.17820"	"2180.17856"	"-0.17"	"-0.00012"	"10/146"	"10"	"146"	"2860568.40393066"	"HCD"	"MS2"	"22.01534"	"90.5"	"100.000"	"64.7137"	"20878"	"20878"	"20851"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.1"	""	"115.2"	""	"119.3"	""	"126.4"	"3.1"	"196.1"	"172.7"	""	"1259"	"50"	"37.000"	"31.000"	"0.000657651377999493"	"21"	"0"	"2.406E-06"	"1.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9306"	"0.0000"	"1"	"1"	"1"	"727.39764"	"2180.17838"	"2180.17856"	"-0.08"	"-0.00006"	"9/146"	"9"	"146"	"6492039.21002197"	"HCD"	"MS2"	"3.860505"	"157.6"	"100.000"	"61.5997"	"19606"	"19606"	"19587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"192.4"	""	"137.2"	""	"159.6"	""	"288.9"	"2.9"	"358.5"	"359.8"	""	"1254"	"72"	"37.000"	"30.000"	"3.91983278370354E-06"	"22"	"0"	"3.893E-07"	"1.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8361"	"0.0000"	"1"	"1"	"1"	"727.39771"	"2180.17856"	"2180.17856"	"0.00"	"0.00000"	"9/146"	"9"	"146"	"2125479.66503906"	"HCD"	"MS2"	"12.58631"	"62.3"	"100.000"	"64.3632"	"20735"	"20735"	"20707"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.0"	""	"50.8"	""	"60.8"	""	"83.9"	"1.1"	"205.5"	"130.0"	""	"1252"	"61"	"37.000"	"30.000"	"4.54542329354407E-05"	"27"	"0"	"1.143E-06"	"1.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"1090.59302"	"2180.17876"	"2180.17856"	"0.09"	"0.00010"	"13/146"	"13"	"146"	"2017470.37255859"	"HCD"	"MS2"	"0"	"141.3"	"100.000"	"62.9902"	"20174"	"20174"	"20147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.9"	""	"127.8"	""	"144.1"	""	"263.2"	"4.8"	"327.9"	"302.1"	""	"1256"	"102"	"37.000"	"30.000"	"4.13961206213433E-09"	"25"	"0"	"9.523E-08"	"1.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9589"	"0.0000"	"1"	"1"	"1"	"1090.59302"	"2180.17876"	"2180.17856"	"0.09"	"0.00010"	"13/146"	"13"	"146"	"5294820.29882813"	"HCD"	"MS2"	"0.7328297"	"368.4"	"100.000"	"63.2329"	"20220"	"20220"	"20201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"390.1"	""	"304.7"	""	"364.2"	""	"681.6"	""	"922.6"	"847.5"	""	"1256"	"73"	"37.000"	"30.000"	"2.91715592839887E-06"	"20"	"0"	"2.677E-07"	"1.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"1090.59314"	"2180.17900"	"2180.17856"	"0.20"	"0.00022"	"10/146"	"10"	"146"	"140333.543701172"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"61.5770"	"19544"	"19544"	"19513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.7"	""	"8.4"	""	"14.9"	""	"16.6"	""	"23.8"	"28.0"	""	"1255"	"30"	"37.000"	"30.000"	"0.0634766107548086"	"17"	"0.0004166"	"0.002106"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.7547"	"0.0000"	"1"	"1"	"1"	"545.80023"	"2180.17910"	"2180.17856"	"0.25"	"0.00013"	"14/146"	"14"	"146"	"2557231.95281982"	"HCD"	"MS2"	"13.75718"	"54.9"	"100.000"	"63.6558"	"20446"	"20446"	"20419"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.4"	""	"65.7"	""	"64.9"	""	"97.8"	""	"116.9"	"108.4"	""	"1255"	"53"	"37.000"	"30.000"	"0.000343252516715967"	"29"	"0"	"3.311E-06"	"1.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.9574"	"0.0000"	"1"	"1"	"1"	"545.80023"	"2180.17910"	"2180.17856"	"0.25"	"0.00013"	"17/146"	"17"	"146"	"20223845.4511719"	"HCD"	"MS2"	"4.958588"	"291.9"	"100.000"	"62.9387"	"20100"	"20100"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"329.4"	""	"264.6"	""	"311.6"	""	"545.0"	"3.6"	"686.0"	"637.7"	""	"1255"	"47"	"37.000"	"30.000"	"0.00116577229557004"	"18"	"0"	"1.285E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"1090.59326"	"2180.17925"	"2180.17856"	"0.32"	"0.00034"	"12/146"	"12"	"146"	"273417.572021484"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"63.5676"	"20357"	"20357"	"20329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.5"	""	"20.0"	""	"22.7"	""	"36.6"	"2.8"	"56.1"	"51.9"	""	"1254"	"75"	"37.000"	"30.000"	"2.1992142496826E-06"	"22"	"0"	"1.156E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"727.39807"	"2180.17966"	"2180.17856"	"0.50"	"0.00037"	"12/146"	"12"	"146"	"5557582.5098877"	"HCD"	"MS2"	"1.895599"	"135.0"	"100.000"	"63.6229"	"20379"	"20379"	"20361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.4"	""	"126.9"	""	"153.2"	""	"231.0"	"0.3"	"321.5"	"303.8"	""	"1250"	"51"	"37.000"	"30.000"	"0.000531961273876485"	"19"	"0"	"8.733E-07"	"1.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"727.39819"	"2180.18003"	"2180.17856"	"0.67"	"0.00049"	"12/146"	"12"	"146"	"2265939.65856934"	"HCD"	"MS2"	"8.551544"	"73.0"	"100.000"	"64.3833"	"20690"	"20690"	"20665"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.4"	""	"51.6"	""	"69.9"	""	"93.5"	"0.7"	"269.6"	"146.4"	""	"1255"	"46"	"37.000"	"30.000"	"0.00141128176516195"	"20"	"0"	"3.184E-06"	"1.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9194"	"0.0000"	"1"	"1"	"1"	"727.39832"	"2180.18039"	"2180.17856"	"0.84"	"0.00061"	"10/146"	"10"	"146"	"6136988.79699707"	"HCD"	"MS2"	"1.814583"	"154.2"	"100.000"	"61.4411"	"19488"	"19488"	"19465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.2"	""	"131.6"	""	"176.3"	""	"267.1"	""	"368.2"	"341.2"	""	"1267"	"62"	"38.000"	"31.000"	"3.77351967925628E-05"	"21"	"0"	"5.034E-07"	"1.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.7755"	"0.0000"	"1"	"1"	"1"	"545.80066"	"2180.18081"	"2180.17856"	"1.03"	"0.00056"	"13/146"	"13"	"146"	"2929687.77783203"	"HCD"	"MS2"	"6.741826"	"60.2"	"100.000"	"63.5539"	"20351"	"20351"	"20329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.4"	""	"57.7"	""	"74.3"	""	"99.0"	""	"138.6"	"136.4"	""	"1256"	"49"	"37.000"	"30.000"	"0.000762008198092006"	"27"	"0"	"3.473E-06"	"1.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"727.39850"	"2180.18094"	"2180.17856"	"1.09"	"0.00079"	"14/146"	"14"	"146"	"2071508.63250732"	"HCD"	"MS2"	"0"	"59.6"	"100.000"	"63.9916"	"20530"	"20530"	"20505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.3"	""	"62.1"	""	"69.4"	""	"102.8"	""	"124.9"	"127.6"	""	"1256"	"66"	"37.000"	"30.000"	"1.6366644293993E-05"	"22"	"0"	"9.607E-07"	"1.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8039"	"0.0000"	"1"	"1"	"1"	"727.39856"	"2180.18113"	"2180.17856"	"1.18"	"0.00086"	"12/146"	"12"	"146"	"20924063.9905396"	"HCD"	"MS2"	"22.63696"	"430.4"	"100.000"	"62.9649"	"20164"	"20164"	"20147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"495.8"	""	"403.8"	""	"438.8"	""	"778.5"	""	"1028.2"	"954.3"	""	"1256"	"51"	"37.000"	"30.000"	"0.000447671702919454"	"26"	"0"	"1.773E-06"	"1.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"727.39868"	"2180.18149"	"2180.17856"	"1.34"	"0.00098"	"16/146"	"16"	"146"	"15511088.8325195"	"HCD"	"MS2"	"29.58938"	"301.3"	"100.000"	"62.8787"	"20075"	"20075"	"20057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"372.1"	""	"300.6"	""	"311.7"	""	"562.1"	"4.1"	"678.3"	"636.3"	""	"1263"	"58"	"38.000"	"31.000"	"0.00010601647374444"	"22"	"0"	"4.017E-07"	"1.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.7692"	"0.0000"	"1"	"1"	"1"	"545.80115"	"2180.18276"	"2180.17856"	"1.93"	"0.00105"	"13/146"	"13"	"146"	"46798090.8061523"	"HCD"	"MS2"	"1.081227"	"112.9"	"17.431"	"63.2306"	"20219"	"20219"	"20201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.1"	""	"101.1"	""	"130.9"	""	"194.5"	""	"281.0"	"254.4"	""	"1270"	"52"	"38.000"	"31.000"	"0.000414737900931145"	"28"	"0"	"4.454E-06"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"727.39935"	"2180.18351"	"2180.17856"	"2.27"	"0.00165"	"12/146"	"12"	"146"	"154977562.258789"	"HCD"	"MS2"	"0"	"126.5"	"4.308"	"63.3168"	"20308"	"20308"	"20291"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.1"	""	"102.0"	""	"130.3"	""	"212.8"	""	"317.7"	"313.3"	""	"1259"	"49"	"37.000"	"31.000"	"0.000841386877665985"	"18"	"0"	"1.351E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPQVk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8113"	"0.0000"	"1"	"1"	"1"	"727.40192"	"2180.19120"	"2180.17856"	"5.80"	"0.00421"	"12/146"	"12"	"146"	"88640549.6992188"	"HCD"	"MS2"	"0"	"135.8"	"7.451"	"63.3046"	"20250"	"20250"	"20233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.2"	""	"121.5"	""	"136.5"	""	"247.9"	""	"333.0"	"315.6"	""	"1202"	"53"	"37.000"	"30.000"	"0.000304000621863871"	"26"	"0"	"2.812E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYKEEGLNAFYK"	"[K].mYkEEGLNAFYk.[G]"	"N-Term(TMT6plex); K3(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.40546"	"2180.20182"	"2180.20287"	"-0.48"	"-0.00035"	"9/108"	"9"	"108"	"1763612.58209229"	"HCD"	"MS2"	"0"	"153.8"	"100.000"	"48.1510"	"14139"	"14139"	"14114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.8"	""	"269.1"	""	"269.8"	""	"151.3"	""	"265.1"	"287.1"	""	"1152"	"12"	"37.000"	"30.000"	"3.48676343858254"	"13"	"0"	"5.017E-05"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYKEEGLNAFYK"	"[K].mYkEEGLNAFYk.[G]"	"N-Term(TMT6plex); K3(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.40649"	"2180.20493"	"2180.20287"	"0.94"	"0.00069"	"13/108"	"13"	"108"	"3462990.41992188"	"HCD"	"MS2"	"4.514423"	"284.8"	"100.000"	"47.7682"	"13934"	"13934"	"13912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"433.0"	""	"503.1"	""	"501.8"	""	"273.0"	""	"452.6"	"534.7"	""	"1127"	"12"	"37.000"	"30.000"	"3.36429383989991"	"13"	"0"	"2.99E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNYSEDLELASLLIK"	"[K].nNYSEDLELASLLIk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7660"	"0.0000"	"1"	"1"	"1"	"727.41113"	"2180.21885"	"2180.22147"	"-1.20"	"-0.00088"	"9/154"	"9"	"154"	"367613.647827148"	"HCD"	"MS2"	"9.620196"	"13.5"	"100.000"	"85.0586"	"29108"	"29108"	"29083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.2"	""	"17.1"	""	"17.8"	""	"24.8"	""	"24.8"	"29.7"	""	"1019"	"47"	"37.000"	"30.000"	"0.00107930499840911"	"27"	"0"	"2.012E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNYSEDLELASLLIK"	"[K].nNYSEDLELASLLIk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"727.41150"	"2180.21994"	"2180.22147"	"-0.70"	"-0.00051"	"10/154"	"10"	"154"	"424690.597595215"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"85.1455"	"29194"	"29194"	"29170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.6"	""	"17.0"	""	"16.8"	""	"27.3"	""	"31.2"	"25.8"	""	"1008"	"44"	"37.000"	"30.000"	"0.00214501600219406"	"19"	"0"	"9.839E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATVHPGLELPLMMAK"	"[K].nATVHPGLELPLMMAk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63468"	"Phosphoribosyl pyrophosphate synthase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Prpsap1 PE=1 SV=1"	"Q63468"	"Phosphoribosyl pyrophosphate synthase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Prpsap1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.41650"	"2180.23496"	"2180.23357"	"0.64"	"0.00046"	"17/162"	"17"	"162"	"1344099.58435059"	"HCD"	"MS2"	"28.69964"	"69.4"	"100.000"	"58.3944"	"18249"	"18249"	"18218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.4"	""	"83.4"	""	"90.6"	""	"105.1"	"0.1"	"147.2"	"134.4"	""	"916"	"19"	"36.000"	"29.000"	"0.579249247141787"	"14"	"0"	"0.0001444"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATVHPGLELPLMMAK"	"[K].nATVHPGLELPLMMAk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63468"	"Phosphoribosyl pyrophosphate synthase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Prpsap1 PE=1 SV=1"	"Q63468"	"Phosphoribosyl pyrophosphate synthase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Prpsap1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.41687"	"2180.23606"	"2180.23357"	"1.14"	"0.00083"	"11/162"	"11"	"162"	"1104927.4666748"	"HCD"	"MS2"	"67.42901"	"57.0"	"100.000"	"58.6391"	"18403"	"18403"	"18373"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.9"	""	"64.8"	"2.0"	"79.0"	""	"80.8"	"1.4"	"108.5"	"127.5"	""	"915"	"25"	"36.000"	"29.000"	"0.160838901541696"	"14"	"0"	"0.0001683"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEEAIAAGVPVEVLK"	"[R].iIAEEAIAAGVPVEVLk.[D]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8594"	"0.0000"	"1"	"1"	"1"	"727.44763"	"2180.32834"	"2180.33063"	"-1.05"	"-0.00076"	"16/148"	"16"	"148"	"773951.454040527"	"HCD"	"MS2"	"11.08419"	"22.0"	"100.000"	"80.9688"	"27491"	"27491"	"27470"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.8"	""	"27.9"	""	"36.6"	""	"38.6"	""	"40.0"	"43.0"	""	"319"	"64"	"32.000"	"25.000"	"5.81782545346345E-06"	""	"0"	"1.853E-06"	"1.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEEAIAAGVPVEVLK"	"[R].iIAEEAIAAGVPVEVLk.[D]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"727.44910"	"2180.33274"	"2180.33063"	"0.97"	"0.00070"	"14/148"	"14"	"148"	"791462.093994141"	"HCD"	"MS2"	"7.132158"	"24.3"	"100.000"	"80.9788"	"27444"	"27444"	"27424"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.6"	""	"27.1"	""	"40.2"	""	"38.8"	""	"52.3"	"43.5"	""	"321"	"53"	"32.000"	"25.000"	"8.90174269297447E-05"	"18"	"0"	"7.357E-06"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPELLTMWFGESEANVR"	"[K].gPELLTmWFGESEANVR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"1091.04541"	"2181.08354"	"2181.08477"	"-0.56"	"-0.00061"	"8/152"	"8"	"152"	"128606.788085938"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"81.3357"	"27641"	"27641"	"27614"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.8"	""	"10.3"	""	"9.3"	""	"10.5"	""	"15.3"	"16.3"	""	"1101"	"14"	"37.000"	"30.000"	"2.00797047782547"	"15"	"0.0005564"	"0.003628"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPELLTMWFGESEANVR"	"[K].gPELLTmWFGESEANVR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.69977"	"2181.08475"	"2181.08477"	"-0.01"	"-0.00001"	"13/152"	"13"	"152"	"1055713.12670898"	"HCD"	"MS2"	"42.11658"	"20.3"	"100.000"	"81.1719"	"27574"	"27574"	"27550"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.0"	""	"27.7"	""	"26.1"	""	"29.5"	""	"42.6"	"39.1"	""	"1109"	"26"	"37.000"	"30.000"	"0.147197878411544"	"15"	"0.0001308"	"0.0003116"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPELLTMWFGESEANVR"	"[K].gPELLTmWFGESEANVR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"1091.04639"	"2181.08550"	"2181.08477"	"0.33"	"0.00036"	"8/152"	"8"	"152"	"127387.083435059"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"81.3384"	"27591"	"27591"	"27568"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"12.1"	""	"9.9"	""	"11.0"	""	"18.2"	"19.5"	""	"1100"	"22"	"37.000"	"30.000"	"0.363381396404177"	"19"	"0.000523"	"0.002815"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPELLTMWFGESEANVR"	"[K].gPELLTmWFGESEANVR.[E]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"727.70044"	"2181.08677"	"2181.08477"	"0.91"	"0.00066"	"13/152"	"13"	"152"	"1102114.57196045"	"HCD"	"MS2"	"37.92176"	"20.6"	"100.000"	"81.1838"	"27528"	"27528"	"27504"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"31.2"	""	"24.8"	""	"22.9"	"0.7"	"41.2"	"41.9"	""	"1113"	"21"	"37.000"	"30.000"	"0.423121573117211"	"17"	"0.0001889"	"0.0005071"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLLALEFYTPETANWR"	"[R].aGLLALEFYTPETANWR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"727.72260"	"2181.15323"	"2181.15417"	"-0.43"	"-0.00031"	"4/144"	"4"	"144"	"146104.728088379"	"HCD"	"MS2"	"24.30237"	"7.4"	"100.000"	"82.6519"	"28127"	"28127"	"28096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.5"	""	"7.9"	""	"11.5"	""	"14.4"	""	"12.6"	"12.4"	""	"1306"	"2"	"38.000"	"31.000"	"40.6362086215461"	"13"	"0.0006037"	"0.004257"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAIMGNPqVk.[A]"	"N-Term(TMT6plex); Q15(Deamidated); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.2593"	"0.0000"	"1"	"1"	"1"	"727.72430"	"2181.15836"	"2181.16258"	"-1.93"	"-0.00141"	"16/146"	"16"	"146"	"1994490.58673096"	"HCD"	"MS2"	"2.634823"	"66.9"	"100.000"	"64.8764"	"20891"	"20891"	"20873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.1"	""	"81.7"	""	"93.2"	""	"104.5"	"2.5"	"126.7"	"124.9"	""	"1287"	"54"	"38.000"	"31.000"	"0.000239082919924031"	"20"	"0"	"6.755E-06"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLLALEFYTPETANWR"	"[R].aGLLALEFYTPETANWR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.72473"	"2181.15964"	"2181.15417"	"2.51"	"0.00182"	"11/144"	"11"	"144"	"228519.644836426"	"HCD"	"MS2"	"18.45106"	"8.6"	"100.000"	"82.5913"	"28153"	"28153"	"28125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.2"	""	"9.5"	""	"10.7"	""	"13.7"	""	"15.9"	"18.2"	""	"1287"	"28"	"38.000"	"31.000"	"0.111827483330022"	"14"	"0.0001889"	"0.001079"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSILGATLKDEGK"	"[R].vYSILGATLkDEGk.[L]"	"N-Term(TMT6plex); K10(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.08160"	"2181.30459"	"2181.30978"	"-2.38"	"-0.00130"	"9/130"	"9"	"130"	"3238803.57397461"	"HCD"	"MS2"	"24.97784"	"107.4"	"100.000"	"59.0367"	"18560"	"18560"	"18533"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.2"	""	"157.2"	""	"160.5"	""	"153.0"	""	"168.8"	"162.6"	""	"437"	"32"	"33.000"	"26.000"	"0.0153267982704764"	"14"	"0"	"0.0001398"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKEAELLEPLMPAIR"	"[K].lkEAELLEPLMPAIR.[A]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.77399"	"2181.30741"	"2181.30812"	"-0.33"	"-0.00024"	"12/148"	"12"	"148"	"1791633.27020264"	"HCD"	"MS2"	"63.81009"	"64.2"	"100.000"	"69.8209"	"22954"	"22954"	"22929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.8"	""	"91.7"	""	"96.9"	""	"104.2"	""	"98.4"	"103.8"	""	"423"	"39"	"33.000"	"26.000"	"0.00256631741873343"	"15"	"0"	"2.12E-06"	"1.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKEAELLEPLMPAIR"	"[K].lkEAELLEPLMPAIR.[A]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"1"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"727.77423"	"2181.30814"	"2181.30812"	"0.01"	"0.00001"	"12/148"	"12"	"148"	"2594436.99865723"	"HCD"	"MS2"	"37.11658"	"88.2"	"100.000"	"70.0321"	"22988"	"22988"	"22966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.8"	""	"114.4"	""	"119.4"	""	"151.5"	"0.4"	"152.0"	"156.3"	""	"409"	"32"	"33.000"	"26.000"	"0.0116598593681413"	"17"	"0"	"1.9E-05"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSILGATLKDEGK"	"[R].vYSILGATLkDEGk.[L]"	"N-Term(TMT6plex); K10(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.77429"	"2181.30832"	"2181.30978"	"-0.67"	"-0.00049"	"14/130"	"14"	"130"	"7633794.30621338"	"HCD"	"MS2"	"16.3283"	"463.0"	"100.000"	"59.0998"	"18585"	"18585"	"18565"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"904.2"	""	"799.6"	""	"640.6"	""	"657.7"	""	"673.7"	"701.4"	""	"409"	"10"	"33.000"	"26.000"	"2.0497142118693"	"13"	"0"	"1.721E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSILGATLKDEGK"	"[R].vYSILGATLkDEGk.[L]"	"N-Term(TMT6plex); K10(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.08264"	"2181.30874"	"2181.30978"	"-0.48"	"-0.00026"	"9/130"	"9"	"130"	"3465588.24475098"	"HCD"	"MS2"	"7.570814"	"108.0"	"100.000"	"58.9754"	"18482"	"18482"	"18457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"214.7"	""	"148.2"	""	"157.8"	""	"167.3"	""	"163.6"	"168.9"	""	"409"	"28"	"33.000"	"26.000"	"0.0333959123344391"	"14"	"0"	"5.409E-05"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSILGATLKDEGK"	"[R].vYSILGATLkDEGk.[L]"	"N-Term(TMT6plex); K10(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.77448"	"2181.30887"	"2181.30978"	"-0.42"	"-0.00030"	"13/130"	"13"	"130"	"7146138.01275635"	"HCD"	"MS2"	"16.34369"	"451.7"	"100.000"	"58.9290"	"18463"	"18463"	"18441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"874.9"	""	"773.7"	""	"623.0"	""	"613.8"	""	"719.0"	"663.7"	""	"409"	"13"	"33.000"	"26.000"	"1.12122639326315"	"13"	"0"	"2.678E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APSIELNADHPFLFLIR"	"[K].aPSIELNADHPFLFLIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3K4"	"Serpin B10 OS=Rattus norvegicus OX=10116 GN=Serpinb10 PE=2 SV=1"	"Q8K3K4"	"Serpin B10 OS=Rattus norvegicus OX=10116 GN=Serpinb10 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.07904"	"2182.22257"	"2182.22219"	"0.17"	"0.00013"	"13/160"	"13"	"160"	"960740.706420898"	"HCD"	"MS2"	"7.234722"	"23.5"	"100.000"	"75.3557"	"25161"	"25161"	"25137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.5"	""	"25.6"	""	"31.4"	""	"44.0"	"1.7"	"47.0"	"42.6"	""	"1039"	"34"	"37.000"	"30.000"	"0.0194798474666529"	"15"	"0"	"1.718E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APSIELNADHPFLFLIR"	"[K].aPSIELNADHPFLFLIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3K4"	"Serpin B10 OS=Rattus norvegicus OX=10116 GN=Serpinb10 PE=2 SV=1"	"Q8K3K4"	"Serpin B10 OS=Rattus norvegicus OX=10116 GN=Serpinb10 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.08130"	"2182.22934"	"2182.22219"	"3.28"	"0.00238"	"15/160"	"15"	"160"	"913430.169921875"	"HCD"	"MS2"	"10.54152"	"22.2"	"100.000"	"75.3574"	"25214"	"25214"	"25183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.8"	""	"25.7"	""	"31.3"	""	"46.4"	""	"42.6"	"40.5"	""	"992"	"40"	"36.000"	"29.000"	"0.00481372943753763"	"15"	"0"	"7.033E-06"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEGYVGFANLPNQVYR"	"[K].nLEGYVGFANLPNQVYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1092.07495"	"2183.14263"	"2183.14467"	"-0.94"	"-0.00102"	"7/160"	"7"	"160"	"328304.36541748"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"65.6612"	"21265"	"21265"	"21235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.1"	""	"20.5"	""	"30.1"	""	"28.6"	""	"26.9"	"36.1"	""	"1369"	"34"	"38.000"	"31.000"	"0.0305051702028091"	"15"	"0"	"0.0001332"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEGYVGFANLPNQVYR"	"[K].nLEGYVGFANLPNQVYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.38599"	"2183.14341"	"2183.14467"	"-0.58"	"-0.00042"	"21/160"	"21"	"160"	"6717443.37866211"	"HCD"	"MS2"	"1.561006"	"53.2"	"100.000"	"65.5966"	"21238"	"21238"	"21219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.3"	""	"76.3"	""	"76.6"	""	"84.6"	"2.1"	"94.8"	"95.3"	""	"1382"	"70"	"38.000"	"31.000"	"6.61421103264739E-06"	"17"	"0"	"4.21E-07"	"1.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEGYVGFANLPNQVYR"	"[K].nLEGYVGFANLPNQVYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.38617"	"2183.14396"	"2183.14467"	"-0.33"	"-0.00024"	"19/160"	"19"	"160"	"6322676.88208008"	"HCD"	"MS2"	"2.320591"	"52.6"	"100.000"	"65.7015"	"21228"	"21228"	"21209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.6"	""	"79.3"	""	"77.9"	""	"74.8"	"0.3"	"99.1"	"94.1"	""	"1383"	"68"	"38.000"	"31.000"	"1.05145861681002E-05"	"17"	"0"	"4.867E-07"	"1.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEGYVGFANLPNQVYR"	"[K].nLEGYVGFANLPNQVYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"1092.07617"	"2183.14507"	"2183.14467"	"0.18"	"0.00020"	"19/160"	"19"	"160"	"279287.386047363"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"65.7938"	"21266"	"21266"	"21241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.4"	""	"26.2"	""	"25.6"	""	"22.5"	""	"26.9"	"25.8"	""	"1379"	"41"	"38.000"	"31.000"	"0.00507614793722621"	"18"	"0"	"2.486E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGIPFLETSAK"	"[K].eFADSLGIPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.40320"	"2183.19504"	"2183.20001"	"-2.27"	"-0.00166"	"12/146"	"12"	"146"	"298130.682800293"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"82.1531"	"27974"	"27974"	"27950"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.8"	""	"15.6"	""	"14.0"	""	"28.6"	""	"23.2"	"28.8"	""	"1278"	"20"	"38.000"	"31.000"	"0.689446955504861"	"14"	"0.0001889"	"0.0004048"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGIPFLETSAK"	"[K].eFADSLGIPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"1092.10181"	"2183.19634"	"2183.20001"	"-1.68"	"-0.00184"	"14/146"	"14"	"146"	"237142.129211426"	"HCD"	"MS2"	"21.3378"	"17.0"	"100.000"	"81.4927"	"27705"	"27705"	"27678"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.8"	""	"16.0"	""	"20.0"	""	"35.2"	""	"37.1"	"33.8"	""	"1274"	"62"	"38.000"	"31.000"	"3.96405281652754E-05"	"28"	"0"	"2.069E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGIPFLETSAK"	"[K].eFADSLGIPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"0.8714"	"0.0000"	"1"	"1"	"1"	"728.40387"	"2183.19706"	"2183.20001"	"-1.35"	"-0.00098"	"16/146"	"16"	"146"	"3050436.27929688"	"HCD"	"MS2"	"17.15502"	"76.9"	"100.000"	"81.4742"	"27697"	"27697"	"27678"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.1"	""	"86.1"	""	"78.6"	""	"143.4"	""	"172.9"	"155.7"	""	"1255"	"70"	"37.000"	"30.000"	"6.23180320384135E-06"	"26"	"0"	"1.988E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGIPFLETSAK"	"[K].eFADSLGIPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9492"	"0.0000"	"1"	"1"	"1"	"1092.10278"	"2183.19829"	"2183.20001"	"-0.79"	"-0.00086"	"15/146"	"15"	"146"	"486653.673522949"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"81.6086"	"27701"	"27701"	"27680"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.2"	""	"35.7"	""	"41.4"	""	"69.5"	""	"68.1"	"69.4"	""	"1227"	"59"	"37.000"	"30.000"	"8.6459867783182E-05"	"20"	"0"	"1.146E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGIPFLETSAK"	"[K].eFADSLGIPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"1092.10315"	"2183.19902"	"2183.20001"	"-0.45"	"-0.00049"	"14/146"	"14"	"146"	"195339.851623535"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"81.8413"	"27847"	"27847"	"27822"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.9"	""	"15.1"	""	"15.2"	""	"19.0"	""	"29.6"	"27.4"	""	"1222"	"62"	"37.000"	"30.000"	"3.88187199361416E-05"	"29"	"0"	"1.493E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGIPFLETSAK"	"[K].eFADSLGIPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"0.9315"	"0.0000"	"1"	"1"	"1"	"728.40466"	"2183.19944"	"2183.20001"	"-0.26"	"-0.00019"	"15/146"	"15"	"146"	"3487443.35162354"	"HCD"	"MS2"	"8.566801"	"91.5"	"100.000"	"81.4837"	"27650"	"27650"	"27632"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.2"	""	"106.5"	""	"112.0"	""	"174.5"	""	"191.5"	"173.2"	""	"1220"	"73"	"37.000"	"30.000"	"2.91964356316809E-06"	"22"	"0"	"6.843E-06"	"1.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGIPFLETSAK"	"[K].eFADSLGIPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"728.40472"	"2183.19962"	"2183.20001"	"-0.18"	"-0.00013"	"15/146"	"15"	"146"	"4674413.28845215"	"HCD"	"MS2"	"3.348554"	"118.0"	"100.000"	"81.7858"	"27824"	"27824"	"27806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"157.2"	""	"123.8"	""	"141.0"	""	"220.3"	""	"237.4"	"241.2"	""	"1218"	"63"	"37.000"	"30.000"	"3.16677561888911E-05"	"26"	"0"	"1.843E-06"	"1.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGIPFLETSAK"	"[K].eFADSLGIPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1092.10413"	"2183.20098"	"2183.20001"	"0.44"	"0.00048"	"6/146"	"6"	"146"	"72819.4001464844"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"81.9271"	"27831"	"27831"	"27808"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.3"	""	"6.3"	""	"5.4"	""	"9.9"	""	"8.6"	"10.8"	""	"1213"	"5"	"37.000"	"30.000"	"20.5508980698426"	"13"	"0.002711"	"0.04171"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGIPFLETSAK"	"[K].eFADSLGIPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"0.8167"	"0.0000"	"1"	"1"	"1"	"728.40521"	"2183.20108"	"2183.20001"	"0.49"	"0.00036"	"14/146"	"14"	"146"	"313833.548278809"	"HCD"	"MS2"	"3.721347"	"13.1"	"100.000"	"82.1167"	"27908"	"27908"	"27888"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.6"	""	"17.1"	""	"15.9"	""	"24.9"	""	"27.1"	"22.1"	""	"1213"	"60"	"37.000"	"30.000"	"6.33622812957415E-05"	"27"	"0"	"1.051E-05"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFADSLGIPFLETSAK"	"[K].eFADSLGIPFLETSAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.40564"	"2183.20237"	"2183.20001"	"1.08"	"0.00079"	"16/146"	"16"	"146"	"4160359.73419189"	"HCD"	"MS2"	"0"	"110.1"	"100.000"	"81.7977"	"27778"	"27778"	"27760"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.7"	""	"124.0"	""	"127.3"	""	"213.1"	""	"219.9"	"220.0"	""	"1197"	"66"	"37.000"	"30.000"	"1.42910505282354E-05"	"17"	"0"	"6.651E-06"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLFEAEEQDLFK"	"[R].kLFEAEEQDLFk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.75549"	"2184.25193"	"2184.25193"	"0.00"	"0.00000"	"11/120"	"11"	"120"	"4174440.45703125"	"HCD"	"MS2"	"15.23909"	"261.8"	"100.000"	"57.2321"	"17773"	"17773"	"17755"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"342.9"	""	"305.2"	""	"343.2"	""	"460.2"	""	"518.9"	"516.9"	""	"845"	"22"	"36.000"	"29.000"	"0.266579478042881"	"14"	"0"	"6.966E-06"	"1.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLQANPILEAFGNAK"	"[RK].qLLQANPILEAFGNAk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"2"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"729.09528"	"2185.27127"	"2185.27451"	"-1.48"	"-0.00108"	"13/150"	"13"	"150"	"382451.636901855"	"HCD"	"MS2"	"9.162335"	"17.5"	"100.000"	"80.1150"	"27143"	"27143"	"27119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.4"	""	"16.7"	""	"26.4"	""	"30.3"	""	"32.8"	"38.5"	""	"711"	"41"	"35.000"	"28.000"	"0.00310341321461973"	"17"	"0"	"3.743E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLQANPILEAFGNAK"	"[RK].qLLQANPILEAFGNAk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"2"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"729.09570"	"2185.27256"	"2185.27451"	"-0.89"	"-0.00065"	"15/150"	"15"	"150"	"2000739.23327637"	"HCD"	"MS2"	"58.57554"	"54.1"	"100.000"	"79.7177"	"26981"	"26981"	"26959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.7"	""	"74.9"	""	"88.6"	""	"87.2"	""	"94.5"	"97.3"	""	"704"	"48"	"35.000"	"28.000"	"0.000578818846571655"	"17"	"0"	"1.274E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLQANPILEAFGNAK"	"[RK].qLLQANPILEAFGNAk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"2"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"729.09650"	"2185.27494"	"2185.27451"	"0.20"	"0.00014"	"15/150"	"15"	"150"	"470687.956176758"	"HCD"	"MS2"	"11.41182"	"22.2"	"100.000"	"80.0879"	"27081"	"27081"	"27057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.9"	""	"31.8"	""	"28.5"	""	"37.1"	""	"41.6"	"46.0"	""	"684"	"52"	"35.000"	"28.000"	"0.000193208445385807"	"19"	"0"	"1.002E-05"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLQANPILEAFGNAK"	"[RK].qLLQANPILEAFGNAk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"2"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"1093.14136"	"2185.27544"	"2185.27451"	"0.43"	"0.00046"	"5/150"	"5"	"150"	"71774.0290527344"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"79.8561"	"27038"	"27038"	"27007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.3"	""	"4.9"	""	"4.6"	""	"4.0"	""	"7.6"	"7.5"	""	"675"	"13"	"35.000"	"28.000"	"1.85470044926948"	"15"	"0.0007076"	"0.006867"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLQANPILEAFGNAK"	"[RK].qLLQANPILEAFGNAk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"2"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"729.09674"	"2185.27567"	"2185.27451"	"0.53"	"0.00039"	"15/150"	"15"	"150"	"1935723.23199463"	"HCD"	"MS2"	"57.06275"	"52.1"	"100.000"	"79.7714"	"26952"	"26952"	"26929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.0"	""	"77.1"	""	"71.0"	""	"91.3"	""	"93.4"	"84.9"	""	"669"	"54"	"35.000"	"28.000"	"0.000124565025742153"	"18"	"0"	"4.498E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEmLTHDIAk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"729.40894"	"2186.21225"	"2186.21428"	"-0.93"	"-0.00067"	"15/130"	"15"	"130"	"1529444.87615967"	"HCD"	"MS2"	"20.40132"	"53.0"	"100.000"	"79.2723"	"26800"	"26800"	"26783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.5"	""	"60.5"	""	"59.4"	""	"118.4"	""	"105.6"	"97.9"	""	"1145"	"42"	"37.000"	"30.000"	"0.00351378747956845"	"18"	"0"	"1.004E-05"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEmLTHDIAk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"729.40930"	"2186.21335"	"2186.21428"	"-0.42"	"-0.00031"	"13/130"	"13"	"130"	"454692.751464844"	"HCD"	"MS2"	"4.830851"	"23.4"	"100.000"	"78.9837"	"26682"	"26682"	"26655"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.1"	""	"29.2"	""	"30.8"	""	"39.2"	""	"49.1"	"49.9"	""	"1129"	"56"	"37.000"	"30.000"	"0.000136667089688257"	"24"	"0"	"1.118E-05"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEmLTHDIAk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"729.40936"	"2186.21354"	"2186.21428"	"-0.34"	"-0.00025"	"13/130"	"13"	"130"	"1984447.69787598"	"HCD"	"MS2"	"13.93117"	"65.4"	"100.000"	"79.3239"	"26770"	"26770"	"26753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.6"	""	"82.3"	""	"71.4"	""	"137.1"	"0.2"	"127.0"	"119.8"	""	"1129"	"48"	"37.000"	"30.000"	"0.000834956685120954"	"22"	"0"	"2.069E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEmLTHDIAk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"729.40985"	"2186.21500"	"2186.21428"	"0.33"	"0.00024"	"14/130"	"14"	"130"	"499801.488220215"	"HCD"	"MS2"	"4.905317"	"24.8"	"100.000"	"79.0284"	"26649"	"26649"	"26625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.9"	""	"23.3"	""	"34.9"	""	"49.7"	""	"52.9"	"48.4"	""	"1132"	"45"	"37.000"	"30.000"	"0.00177752792073394"	"17"	"0"	"7.866E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEmLTHDIAk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8983"	"0.0000"	"1"	"1"	"1"	"729.41022"	"2186.21610"	"2186.21428"	"0.83"	"0.00061"	"14/130"	"14"	"130"	"949782.866638184"	"HCD"	"MS2"	"13.48616"	"37.3"	"100.000"	"78.6123"	"26530"	"26530"	"26511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.6"	""	"48.5"	""	"47.7"	""	"77.2"	""	"66.6"	"65.5"	""	"1123"	"59"	"37.000"	"30.000"	"7.85868281624526E-05"	"23"	"0"	"1.674E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEALDEMLTHDIAK"	"[K].lLEALDEmLTHDIAk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.8167"	"0.0000"	"1"	"1"	"1"	"729.41028"	"2186.21628"	"2186.21428"	"0.92"	"0.00067"	"17/130"	"17"	"130"	"1300620.28234863"	"HCD"	"MS2"	"10.1272"	"53.0"	"100.000"	"78.6639"	"26500"	"26500"	"26481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.8"	""	"60.2"	""	"65.0"	""	"123.2"	""	"100.3"	"103.2"	""	"1124"	"60"	"37.000"	"30.000"	"5.37943068067702E-05"	"27"	"0"	"9.289E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTTTDMIAEVGAAFSK"	"[R].sTTTTDMIAEVGAAFSk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"730.05695"	"2188.15628"	"2188.15716"	"-0.40"	"-0.00029"	"17/158"	"17"	"158"	"1023658.65606689"	"HCD"	"MS2"	"0"	"45.7"	"100.000"	"74.8409"	"24951"	"24951"	"24929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.8"	""	"58.5"	""	"66.9"	""	"53.4"	""	"96.0"	"87.5"	""	"1299"	"41"	"38.000"	"31.000"	"0.00469438987439609"	"18"	"0"	"3.705E-06"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTTTDMIAEVGAAFSK"	"[R].sTTTTDMIAEVGAAFSk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"730.05713"	"2188.15683"	"2188.15716"	"-0.15"	"-0.00011"	"19/158"	"19"	"158"	"1687517.55401611"	"HCD"	"MS2"	"6.905114"	"62.7"	"100.000"	"74.7093"	"24949"	"24949"	"24927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.8"	""	"78.6"	""	"98.9"	""	"75.7"	""	"119.2"	"119.0"	""	"1294"	"37"	"38.000"	"31.000"	"0.0120477037742088"	"19"	"0"	"1.311E-06"	"1.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDPSLFPPVPLFSGVPSR"	"[K].mDPSLFPPVPLFSGVPSR.[S]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.06036"	"2188.16654"	"2188.16738"	"-0.38"	"-0.00028"	"8/166"	"8"	"166"	"335814.454833984"	"HCD"	"MS2"	"5.002073"	"10.4"	"100.000"	"82.4419"	"28041"	"28041"	"28016"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.9"	""	"13.7"	""	"16.8"	""	"13.5"	""	"20.2"	"22.8"	""	"1286"	"33"	"38.000"	"31.000"	"0.0348506572528244"	"15"	"0"	"0.0001118"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDPSLFPPVPLFSGVPSR"	"[K].mDPSLFPPVPLFSGVPSR.[S]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.06122"	"2188.16910"	"2188.16738"	"0.79"	"0.00057"	"9/166"	"9"	"166"	"343855.950012207"	"HCD"	"MS2"	"5.233135"	"8.9"	"100.000"	"82.4229"	"28084"	"28084"	"28062"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"9.9"	""	"15.5"	""	"14.1"	""	"19.2"	"15.4"	""	"1291"	"47"	"38.000"	"31.000"	"0.00131491066115904"	"15"	"0.0001889"	"0.0007131"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLSTSIPEAQWQSSLAR"	"[R].wLSTSIPEAQWQSSLAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"730.38879"	"2189.15183"	"2189.15523"	"-1.56"	"-0.00113"	"15/164"	"15"	"164"	"2609674.45422363"	"HCD"	"MS2"	"16.56704"	"37.9"	"100.000"	"69.2946"	"22687"	"22687"	"22666"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.2"	""	"50.7"	""	"47.8"	""	"55.8"	""	"67.0"	"86.3"	""	"1309"	"50"	"38.000"	"31.000"	"0.000665134769483871"	"21"	"0"	"2.405E-05"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLSTSIPEAQWQSSLAR"	"[R].wLSTSIPEAQWQSSLAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"1095.08081"	"2189.15434"	"2189.15523"	"-0.41"	"-0.00044"	"15/164"	"15"	"164"	"442237.049926758"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"69.2122"	"22705"	"22705"	"22682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.5"	""	"20.4"	""	"24.1"	""	"41.0"	""	"37.9"	"45.9"	""	"1326"	"30"	"38.000"	"31.000"	"0.0667595696448747"	"16"	"0"	"0.0001343"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLSTSIPEAQWQSSLAR"	"[R].wLSTSIPEAQWQSSLAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"1095.08105"	"2189.15483"	"2189.15523"	"-0.18"	"-0.00020"	"11/164"	"11"	"164"	"413002.584838867"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"69.4166"	"22737"	"22737"	"22714"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.1"	""	"19.4"	""	"29.2"	""	"34.1"	""	"34.1"	"47.7"	""	"1300"	"39"	"38.000"	"31.000"	"0.00751472957424865"	"21"	"0"	"0.0001623"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLSTSIPEAQWQSSLAR"	"[R].wLSTSIPEAQWQSSLAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8507"	"0.0000"	"1"	"1"	"1"	"730.38989"	"2189.15512"	"2189.15523"	"-0.05"	"-0.00004"	"16/164"	"16"	"164"	"3210809.54370117"	"HCD"	"MS2"	"14.60989"	"45.9"	"100.000"	"69.1386"	"22675"	"22675"	"22650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.3"	""	"66.4"	""	"66.2"	""	"68.7"	"1.4"	"76.4"	"88.5"	""	"1304"	"67"	"38.000"	"31.000"	"1.32204913312787E-05"	"27"	"0"	"9.448E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVPILLDANVSTYDK"	"[R].aIVPILLDANVSTYDk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.76392"	"2190.27719"	"2190.27859"	"-0.64"	"-0.00047"	"11/146"	"11"	"146"	"379053.688293457"	"HCD"	"MS2"	"5.653587"	"18.0"	"100.000"	"77.2134"	"25959"	"25959"	"25941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.9"	""	"17.5"	""	"28.6"	""	"26.3"	""	"39.7"	"39.1"	""	"670"	"28"	"35.000"	"28.000"	"0.055340720240672"	"14"	"0"	"5.968E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVPILLDANVSTYDK"	"[R].aIVPILLDANVSTYDk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.76575"	"2190.28269"	"2190.27859"	"1.87"	"0.00137"	"11/146"	"11"	"146"	"362331.276855469"	"HCD"	"MS2"	"4.975674"	"17.7"	"100.000"	"77.2470"	"25922"	"25922"	"25897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.5"	""	"22.2"	""	"20.8"	""	"29.1"	""	"38.2"	"35.3"	""	"653"	"22"	"35.000"	"28.000"	"0.217712410148247"	"14"	"0"	"0.0001821"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPAYLAETLYYAMK"	"[R].sIPAYLAETLYYAMk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"731.40698"	"2192.20639"	"2192.20773"	"-0.61"	"-0.00045"	"9/128"	"9"	"128"	"152811.091186523"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"99.8407"	"34118"	"34118"	"34111"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.0"	""	"3.1"	""	"5.4"	""	"5.6"	""	"4.3"	"4.4"	""	"1198"	"29"	"37.000"	"30.000"	"0.0679871478587717"	"15"	"0.0001889"	"0.0007068"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVGFIGLGNMGNPMAK"	"[K].tPVGFIGLGNmGNPmAk.[N]"	"N-Term(TMT6plex); M11(Oxidation); M15(Oxidation); K17(TMT6plex)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"732.06549"	"2194.18192"	"2194.17645"	"2.49"	"0.00182"	"14/142"	"14"	"142"	"2502984.20898438"	"HCD"	"MS2"	"0"	"92.8"	"100.000"	"52.3649"	"15805"	"15805"	"15778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.9"	""	"128.2"	""	"133.4"	""	"156.5"	"2.4"	"176.5"	"152.3"	""	"1239"	"45"	"37.000"	"30.000"	"0.00187086009078905"	"27"	"0"	"8.652E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVGFIGLGNMGNPMAK"	"[K].tPVGFIGLGNmGNPmAk.[N]"	"N-Term(TMT6plex); M11(Oxidation); M15(Oxidation); K17(TMT6plex)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"732.06561"	"2194.18229"	"2194.17645"	"2.66"	"0.00194"	"13/142"	"13"	"142"	"2114102.53222656"	"HCD"	"MS2"	"4.177748"	"92.5"	"100.000"	"52.6280"	"15962"	"15962"	"15942"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.7"	""	"124.7"	""	"128.1"	""	"155.5"	""	"171.4"	"174.7"	""	"1228"	"36"	"37.000"	"30.000"	"0.0138410287626159"	"26"	"0"	"0.0001485"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1097.59631"	"2194.18535"	"2194.19084"	"-2.50"	"-0.00274"	"17/146"	"17"	"146"	"1226706.33959961"	"HCD"	"MS2"	"0"	"88.6"	"100.000"	"42.7744"	"11908"	"11908"	"11884"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.6"	""	"84.9"	""	"105.2"	""	"188.2"	""	"204.1"	"185.9"	""	"1229"	"29"	"37.000"	"30.000"	"0.0742201601673116"	"14"	"0"	"7.456E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9608"	"0.0000"	"1"	"1"	"1"	"732.06702"	"2194.18650"	"2194.19084"	"-1.98"	"-0.00145"	"18/146"	"18"	"146"	"4516738.10791016"	"HCD"	"MS2"	"0"	"130.1"	"100.000"	"43.5156"	"12201"	"12201"	"12186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"132.8"	""	"126.7"	""	"149.1"	""	"282.6"	""	"267.7"	"279.4"	""	"1213"	"51"	"37.000"	"30.000"	"0.000466477612033829"	"17"	"0"	"4.121E-06"	"1.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9710"	"0.0000"	"1"	"1"	"1"	"732.06726"	"2194.18723"	"2194.19084"	"-1.65"	"-0.00120"	"19/146"	"19"	"146"	"46957971.4858398"	"HCD"	"MS2"	"2.25727"	"137.8"	"12.263"	"43.2597"	"12149"	"12149"	"12137"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.1"	"2.4"	"128.4"	""	"148.2"	""	"289.6"	"1.4"	"295.2"	"290.9"	""	"1221"	"69"	"37.000"	"30.000"	"8.01098038351224E-06"	"18"	"0"	"4.997E-06"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"732.06726"	"2194.18723"	"2194.19084"	"-1.65"	"-0.00120"	"17/146"	"17"	"146"	"8157423.83184814"	"HCD"	"MS2"	"0"	"164.2"	"75.906"	"43.2180"	"12080"	"12080"	"12064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.5"	""	"172.7"	""	"193.1"	""	"345.7"	""	"336.9"	"341.1"	""	"1221"	"51"	"37.000"	"30.000"	"0.00050779178225818"	"18"	"0"	"3.056E-06"	"1.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"0.8400"	"0.0000"	"1"	"1"	"1"	"549.30237"	"2194.18764"	"2194.19084"	"-1.46"	"-0.00080"	"5/146"	"5"	"146"	"122551541.680664"	"HCD"	"MS2"	"4.762927"	"136.2"	"6.409"	"43.0171"	"12052"	"12052"	"12035"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"131.9"	""	"130.2"	""	"150.9"	""	"293.9"	""	"308.0"	"282.1"	""	"1219"	"25"	"37.000"	"30.000"	"0.210365109125204"	"18"	"0"	"5.975E-05"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"732.06750"	"2194.18796"	"2194.19084"	"-1.31"	"-0.00096"	"16/146"	"16"	"146"	"47860959.6955566"	"HCD"	"MS2"	"0"	"164.6"	"14.569"	"42.9255"	"11968"	"11968"	"11956"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.0"	""	"154.6"	""	"177.0"	""	"348.8"	""	"376.8"	"351.7"	""	"1207"	"54"	"37.000"	"30.000"	"0.000230503367451968"	"19"	"0"	"7.97E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9701"	"0.0000"	"1"	"1"	"1"	"732.06757"	"2194.18814"	"2194.19084"	"-1.23"	"-0.00090"	"19/146"	"19"	"146"	"8085914.84680176"	"HCD"	"MS2"	"0"	"210.7"	"100.000"	"43.5413"	"12260"	"12260"	"12244"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"237.3"	""	"198.9"	""	"253.2"	""	"406.4"	"5.5"	"436.7"	"464.6"	""	"1209"	"67"	"37.000"	"30.000"	"1.31642555738748E-05"	"18"	"0"	"4.699E-06"	"1.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"732.06781"	"2194.18888"	"2194.19084"	"-0.89"	"-0.00065"	"16/146"	"16"	"146"	"4612200.18249512"	"HCD"	"MS2"	"0"	"131.5"	"100.000"	"43.8367"	"12381"	"12381"	"12359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.4"	""	"131.4"	""	"132.7"	""	"278.4"	""	"296.5"	"284.1"	""	"1210"	"50"	"37.000"	"30.000"	"0.000560732043144506"	"17"	"0"	"1.521E-06"	"1.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"732.06781"	"2194.18888"	"2194.19084"	"-0.89"	"-0.00065"	"19/146"	"19"	"146"	"5832797.83660889"	"HCD"	"MS2"	"0"	"152.1"	"100.000"	"43.8044"	"12318"	"12318"	"12303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.7"	""	"64.5"	""	"119.5"	""	"170.6"	""	"752.2"	"305.1"	""	"1210"	"52"	"37.000"	"30.000"	"0.000384375213770305"	"19"	"0"	"1.916E-06"	"1.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"0.8333"	"0.0000"	"1"	"1"	"1"	"549.30292"	"2194.18984"	"2194.19084"	"-0.46"	"-0.00025"	"8/146"	"8"	"146"	"126604366.956543"	"HCD"	"MS2"	"9.482904"	"210.8"	"8.769"	"42.6851"	"11871"	"11871"	"11852"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"200.6"	""	"212.6"	""	"235.6"	""	"461.5"	"0.4"	"451.4"	"441.6"	""	"1207"	"24"	"37.000"	"30.000"	"0.222677980737086"	"18"	"0"	"8.997E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1097.59863"	"2194.18999"	"2194.19084"	"-0.39"	"-0.00043"	"14/146"	"14"	"146"	"3133434.49072266"	"HCD"	"MS2"	"0"	"188.6"	"100.000"	"42.7650"	"11948"	"11948"	"11923"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"198.2"	""	"179.7"	""	"202.6"	""	"404.9"	"3.6"	"410.1"	"393.8"	""	"1208"	"90"	"37.000"	"30.000"	"6.1664744815944E-08"	"18"	"0"	"1.044E-06"	"1.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1097.59875"	"2194.19023"	"2194.19084"	"-0.28"	"-0.00030"	"21/146"	"21"	"146"	"1586126.4085083"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"43.1108"	"12090"	"12090"	"12066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.5"	""	"94.7"	""	"120.0"	""	"226.2"	"4.5"	"236.3"	"225.8"	""	"1213"	"75"	"37.000"	"30.000"	"1.8742641798195E-06"	"17"	"0"	"1.494E-06"	"1.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"732.06830"	"2194.19034"	"2194.19084"	"-0.23"	"-0.00017"	"16/146"	"16"	"146"	"70207945.5361328"	"HCD"	"MS2"	"8.015344"	"879.0"	"52.662"	"42.3339"	"11727"	"11727"	"11708"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"885.6"	""	"861.8"	""	"928.5"	""	"1944.8"	""	"1923.1"	"1826.1"	""	"1213"	"53"	"37.000"	"30.000"	"0.000334064867869877"	"18"	"0"	"7.766E-06"	"1.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9700"	"0.0000"	"1"	"1"	"1"	"1097.59888"	"2194.19048"	"2194.19084"	"-0.16"	"-0.00018"	"15/146"	"15"	"146"	"2643911.72650146"	"HCD"	"MS2"	"0"	"162.1"	"100.000"	"42.4192"	"11762"	"11762"	"11740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.6"	""	"150.4"	""	"172.6"	""	"371.2"	"5.2"	"337.5"	"343.4"	""	"1210"	"100"	"37.000"	"30.000"	"6.75702264907241E-09"	"22"	"0"	"7.888E-07"	"1.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"0.8696"	"0.0000"	"1"	"1"	"1"	"549.30310"	"2194.19057"	"2194.19084"	"-0.12"	"-0.00007"	"5/146"	"5"	"146"	"80767036.3658447"	"HCD"	"MS2"	"6.308981"	"595.3"	"41.854"	"42.3730"	"11743"	"11743"	"11724"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"618.1"	""	"591.0"	""	"638.1"	""	"1312.4"	"12.5"	"1257.4"	"1228.9"	""	"1223"	"23"	"37.000"	"30.000"	"0.327639656069408"	"17"	"0"	"5.542E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9701"	"0.0000"	"1"	"1"	"1"	"732.06842"	"2194.19071"	"2194.19084"	"-0.06"	"-0.00004"	"19/146"	"19"	"146"	"6597282.6774292"	"HCD"	"MS2"	"3.741938"	"176.9"	"100.000"	"44.1624"	"12514"	"12514"	"12492"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.3"	""	"53.7"	""	"136.1"	"1.9"	"178.9"	"4.5"	"917.4"	"354.6"	""	"1223"	"67"	"37.000"	"30.000"	"1.33166952579396E-05"	"19"	"0"	"1.257E-06"	"1.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"732.06848"	"2194.19089"	"2194.19084"	"0.02"	"0.00002"	"16/146"	"16"	"146"	"49822729.1546021"	"HCD"	"MS2"	"14.50234"	"947.4"	"82.969"	"42.6317"	"11893"	"11893"	"11875"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"980.4"	""	"950.6"	""	"1026.6"	""	"2084.2"	""	"2037.5"	"1933.9"	""	"1221"	"50"	"37.000"	"30.000"	"0.000592496335003371"	"20"	"0"	"9.303E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.06860"	"2194.19126"	"2194.19084"	"0.19"	"0.00014"	"17/146"	"17"	"146"	"3243413.91027832"	"HCD"	"MS2"	"0"	"105.4"	"100.000"	"44.5686"	"12680"	"12680"	"12659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"129.6"	""	"130.3"	""	"134.7"	""	"202.3"	"2.7"	"212.1"	"188.1"	""	"1214"	"44"	"37.000"	"30.000"	"0.00227085127081136"	"15"	"0"	"7.262E-06"	"1.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9661"	"0.0000"	"1"	"1"	"1"	"732.06866"	"2194.19144"	"2194.19084"	"0.27"	"0.00020"	"19/146"	"19"	"146"	"2829681.56066895"	"HCD"	"MS2"	"42.87653"	"95.7"	"100.000"	"44.2315"	"12493"	"12493"	"12470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"107.2"	""	"113.5"	""	"113.7"	""	"172.6"	"5.0"	"194.5"	"202.6"	""	"1205"	"59"	"37.000"	"30.000"	"8.16501620941499E-05"	"18"	"0"	"2.167E-06"	"1.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"0.9583"	"0.0000"	"1"	"1"	"1"	"549.30365"	"2194.19277"	"2194.19084"	"0.88"	"0.00048"	"8/146"	"8"	"146"	"164908928.590088"	"HCD"	"MS2"	"0.8201628"	"410.1"	"16.071"	"42.7054"	"11924"	"11924"	"11907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"440.6"	""	"392.3"	""	"447.8"	""	"910.0"	"1.8"	"878.1"	"827.1"	""	"1197"	"24"	"37.000"	"30.000"	"0.213827793633929"	"15"	"0"	"0.0001603"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"732.06927"	"2194.19327"	"2194.19084"	"1.11"	"0.00081"	"18/146"	"18"	"146"	"576912162.644531"	"HCD"	"MS2"	"0"	"158.5"	"1.195"	"42.9392"	"12020"	"12020"	"12003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"158.8"	""	"145.0"	""	"159.7"	""	"336.1"	""	"374.8"	"338.1"	""	"1208"	"49"	"37.000"	"30.000"	"0.00068239673246237"	"18"	"0"	"3.17E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"732.06970"	"2194.19455"	"2194.19084"	"1.69"	"0.00124"	"16/146"	"16"	"146"	"623292338.75"	"HCD"	"MS2"	"0"	"172.3"	"1.163"	"42.6394"	"11853"	"11853"	"11836"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"156.8"	""	"159.0"	""	"193.8"	""	"380.4"	""	"386.4"	"365.4"	""	"1190"	"55"	"37.000"	"30.000"	"0.000206308426019256"	"21"	"0"	"2.141E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.06982"	"2194.19492"	"2194.19084"	"1.86"	"0.00136"	"17/146"	"17"	"146"	"2566191.83087158"	"HCD"	"MS2"	"0"	"81.4"	"100.000"	"44.8780"	"12805"	"12805"	"12784"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.5"	""	"101.5"	""	"107.3"	""	"145.0"	"1.9"	"164.1"	"152.5"	""	"1199"	"35"	"37.000"	"30.000"	"0.020360535091795"	"15"	"0"	"1.552E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].tYFSHIDVSPGSAQVk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.07019"	"2194.19602"	"2194.19084"	"2.36"	"0.00173"	"18/146"	"18"	"146"	"2304516.69714355"	"HCD"	"MS2"	"16.48177"	"73.2"	"100.000"	"44.6670"	"12670"	"12670"	"12646"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.8"	""	"90.4"	""	"98.9"	""	"127.9"	"0.0"	"143.4"	"140.4"	""	"1207"	"51"	"37.000"	"30.000"	"0.000517222339596528"	"16"	"0"	"4.227E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLEVPEINALLLVPK"	"[R].tSLEVPEINALLLVPk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6AY87"	"THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1"	"Q6AY87"	"THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"732.12115"	"2194.34891"	"2194.34628"	"1.20"	"0.00088"	"8/146"	"8"	"146"	"252616.577209473"	"HCD"	"MS2"	"4.862412"	"8.7"	"100.000"	"87.4141"	"30109"	"30109"	"30087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"8.9"	""	"9.8"	""	"18.1"	""	"20.8"	"20.3"	""	"218"	"36"	"30.000"	"23.000"	"0.00284725587629514"	"17"	"0.0002277"	"0.001288"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLEVPEINALLLVPK"	"[R].tSLEVPEINALLLVPk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6AY87"	"THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1"	"Q6AY87"	"THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"732.12140"	"2194.34964"	"2194.34628"	"1.53"	"0.00112"	"5/146"	"5"	"146"	"330243.974060059"	"HCD"	"MS2"	"35.2259"	"10.9"	"100.000"	"87.3601"	"30036"	"30036"	"30013"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"11.6"	""	"9.2"	""	"22.5"	""	"24.2"	"24.3"	""	"215"	"9"	"30.000"	"23.000"	"1.32558769572108"	"14"	"0.0006037"	"0.005851"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQEFSPNYMGLEFK"	"[K].fQEFSPNYMGLEFk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P52796"	"Ephrin-B1 OS=Rattus norvegicus OX=10116 GN=Efnb1 PE=1 SV=1"	"P52796"	"Ephrin-B1 OS=Rattus norvegicus OX=10116 GN=Efnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"732.37988"	"2195.12510"	"2195.12473"	"0.16"	"0.00012"	"10/146"	"10"	"146"	"418719.247253418"	"HCD"	"MS2"	"57.41622"	"25.5"	"100.000"	"75.7472"	"25373"	"25373"	"25343"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.2"	""	"36.8"	""	"32.6"	""	"44.1"	""	"44.8"	"48.3"	""	"1249"	"6"	"37.000"	"30.000"	"16.5018426894755"	"14"	"0.000523"	"0.003178"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQEFSPNYMGLEFK"	"[K].fQEFSPNYMGLEFk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P52796"	"Ephrin-B1 OS=Rattus norvegicus OX=10116 GN=Efnb1 PE=1 SV=1"	"P52796"	"Ephrin-B1 OS=Rattus norvegicus OX=10116 GN=Efnb1 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"732.38013"	"2195.12583"	"2195.12473"	"0.50"	"0.00036"	"10/146"	"10"	"146"	"440013.803833008"	"HCD"	"MS2"	"51.95165"	"24.5"	"100.000"	"75.7619"	"25327"	"25327"	"25297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.2"	""	"32.7"	""	"36.6"	""	"38.0"	""	"48.2"	"44.7"	""	"1267"	"6"	"38.000"	"31.000"	"16.5861893570673"	"15"	"0.0002277"	"0.001236"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"732.72827"	"2196.17026"	"2196.17347"	"-1.46"	"-0.00107"	"14/146"	"14"	"146"	"2260762.4329834"	"HCD"	"MS2"	"22.76182"	"83.0"	"100.000"	"61.4521"	"19546"	"19546"	"19523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"106.4"	""	"105.9"	""	"109.0"	""	"142.0"	""	"159.6"	"170.8"	""	"1281"	"38"	"38.000"	"31.000"	"0.0111819908894558"	"21"	"0"	"1.434E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"732.72858"	"2196.17118"	"2196.17347"	"-1.05"	"-0.00077"	"12/146"	"12"	"146"	"2186577.77264404"	"HCD"	"MS2"	"29.70872"	"86.4"	"100.000"	"58.6406"	"18349"	"18349"	"18329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.6"	""	"104.8"	""	"112.9"	""	"140.8"	"0.5"	"164.9"	"176.0"	""	"1275"	"40"	"38.000"	"31.000"	"0.00653853102985273"	"18"	"0"	"1.019E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9867"	"0.0000"	"1"	"1"	"1"	"1098.58936"	"2196.17143"	"2196.17347"	"-0.93"	"-0.00102"	"12/146"	"12"	"146"	"1565021.61090088"	"HCD"	"MS2"	"0"	"108.4"	"100.000"	"51.2260"	"15389"	"15389"	"15366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.6"	""	"61.0"	""	"83.0"	""	"329.4"	"0.1"	"258.5"	"211.0"	""	"1269"	"75"	"38.000"	"31.000"	"1.92057657013028E-06"	"18"	"0"	"1.943E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"732.72876"	"2196.17173"	"2196.17347"	"-0.80"	"-0.00058"	"10/146"	"10"	"146"	"2105124.72894287"	"HCD"	"MS2"	"10.02029"	"93.6"	"100.000"	"60.1656"	"19021"	"19021"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.7"	""	"99.7"	""	"110.2"	""	"168.9"	"1.7"	"203.9"	"196.6"	""	"1275"	"47"	"38.000"	"31.000"	"0.00126613550981533"	"19"	"0"	"1.721E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"732.72876"	"2196.17173"	"2196.17347"	"-0.80"	"-0.00058"	"12/146"	"12"	"146"	"2125162.92321777"	"HCD"	"MS2"	"15.92936"	"82.2"	"100.000"	"61.2841"	"19424"	"19424"	"19401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.0"	""	"100.6"	""	"110.7"	""	"131.4"	""	"161.1"	"177.0"	""	"1275"	"37"	"38.000"	"31.000"	"0.0124302593234576"	"20"	"0"	"0.0001117"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8983"	"0.0000"	"1"	"1"	"1"	"732.72876"	"2196.17173"	"2196.17347"	"-0.80"	"-0.00058"	"11/146"	"11"	"146"	"9577998.41082764"	"HCD"	"MS2"	"0"	"212.6"	"100.000"	"50.9519"	"15227"	"15227"	"15202"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.8"	"2.7"	"158.1"	""	"158.6"	""	"641.7"	"1.3"	"465.9"	"417.5"	""	"1275"	"59"	"38.000"	"31.000"	"8.57985975710668E-05"	"23"	"0"	"1.347E-06"	"1.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"732.72876"	"2196.17173"	"2196.17347"	"-0.80"	"-0.00058"	"11/146"	"11"	"146"	"7599984.96691895"	"HCD"	"MS2"	"33.14679"	"166.6"	"100.000"	"63.5977"	"20369"	"20369"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"216.9"	""	"186.3"	""	"193.9"	""	"284.4"	""	"351.2"	"351.0"	""	"1275"	"38"	"38.000"	"31.000"	"0.0108512604910178"	"19"	"0"	"1.477E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"732.72882"	"2196.17191"	"2196.17347"	"-0.71"	"-0.00052"	"13/146"	"13"	"146"	"2233827.82098389"	"HCD"	"MS2"	"7.915452"	"87.7"	"100.000"	"56.8367"	"17666"	"17666"	"17637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.0"	""	"99.0"	""	"102.8"	""	"160.2"	"0.9"	"192.7"	"173.8"	""	"1274"	"35"	"38.000"	"31.000"	"0.0190607257351941"	"25"	"0"	"9.867E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"732.72888"	"2196.17209"	"2196.17347"	"-0.63"	"-0.00046"	"13/146"	"13"	"146"	"2435855.86529541"	"HCD"	"MS2"	"48.93971"	"86.3"	"100.000"	"60.1545"	"18963"	"18963"	"18937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.0"	""	"90.4"	""	"98.0"	""	"157.3"	""	"197.7"	"189.2"	""	"1269"	"49"	"38.000"	"31.000"	"0.000747190990198953"	"21"	"0"	"8.977E-06"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9298"	"0.0000"	"1"	"1"	"1"	"732.72894"	"2196.17228"	"2196.17347"	"-0.55"	"-0.00040"	"13/146"	"13"	"146"	"814778.831298828"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"50.6071"	"15086"	"15086"	"15058"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.7"	""	"40.0"	""	"48.1"	""	"88.9"	"3.6"	"78.6"	"79.0"	""	"1268"	"57"	"38.000"	"31.000"	"0.000133072788621731"	"20"	"0"	"3.249E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"732.72894"	"2196.17228"	"2196.17347"	"-0.55"	"-0.00040"	"13/146"	"13"	"146"	"1828209.13745117"	"HCD"	"MS2"	"22.919"	"84.9"	"100.000"	"60.7447"	"19204"	"19204"	"19177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.1"	""	"103.6"	""	"110.4"	""	"129.5"	""	"166.1"	"162.1"	""	"1268"	"42"	"38.000"	"31.000"	"0.00400949113772523"	"16"	"0"	"1.781E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.8980"	"0.0000"	"1"	"1"	"1"	"549.79858"	"2196.17251"	"2196.17347"	"-0.44"	"-0.00024"	"13/146"	"13"	"146"	"12506731.562439"	"HCD"	"MS2"	"4.251674"	"203.8"	"100.000"	"51.0302"	"15259"	"15259"	"15234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.4"	""	"164.3"	""	"186.3"	""	"557.9"	"2.8"	"433.9"	"414.8"	""	"1279"	"49"	"38.000"	"31.000"	"0.000818164344008736"	"21"	"0"	"1.107E-05"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"732.72906"	"2196.17264"	"2196.17347"	"-0.38"	"-0.00028"	"16/146"	"16"	"146"	"8238107.36572266"	"HCD"	"MS2"	"39.45926"	"181.0"	"100.000"	"63.6858"	"20458"	"20458"	"20435"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"246.5"	""	"218.8"	""	"229.7"	""	"293.7"	"0.5"	"371.1"	"357.0"	""	"1276"	"32"	"38.000"	"31.000"	"0.0364603370196651"	"15"	"0"	"2.245E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"732.72913"	"2196.17282"	"2196.17347"	"-0.30"	"-0.00022"	"12/146"	"12"	"146"	"2406941.40490723"	"HCD"	"MS2"	"0"	"78.2"	"100.000"	"64.2758"	"20699"	"20699"	"20675"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.6"	""	"79.1"	""	"90.4"	""	"135.8"	"5.6"	"170.0"	"170.8"	""	"1271"	"38"	"38.000"	"31.000"	"0.0104499823010309"	"21"	"0"	"1.364E-05"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1098.59009"	"2196.17290"	"2196.17347"	"-0.26"	"-0.00029"	"12/146"	"12"	"146"	"1445201.62524414"	"HCD"	"MS2"	"0"	"98.0"	"100.000"	"51.0394"	"15263"	"15263"	"15234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.7"	""	"57.0"	""	"73.1"	""	"295.6"	""	"224.1"	"212.6"	""	"1271"	"75"	"38.000"	"31.000"	"1.87117994827911E-06"	"18"	"0"	"2.337E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"732.72925"	"2196.17319"	"2196.17347"	"-0.13"	"-0.00009"	"14/146"	"14"	"146"	"2042662.80126953"	"HCD"	"MS2"	"32.25824"	"96.3"	"100.000"	"60.7908"	"19276"	"19276"	"19251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.2"	""	"118.1"	""	"121.2"	""	"160.2"	""	"182.8"	"196.3"	""	"1271"	"42"	"38.000"	"31.000"	"0.00423755701835257"	"19"	"0"	"4.368E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.9811"	"0.0000"	"1"	"1"	"1"	"549.79877"	"2196.17324"	"2196.17347"	"-0.11"	"-0.00006"	"14/146"	"14"	"146"	"14669242.2905273"	"HCD"	"MS2"	"3.281652"	"218.6"	"100.000"	"51.2166"	"15385"	"15385"	"15366"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.1"	""	"177.7"	""	"195.4"	""	"595.5"	"7.6"	"464.9"	"432.4"	""	"1271"	"53"	"38.000"	"31.000"	"0.000322192595108574"	"17"	"0"	"5.647E-06"	"1.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.9200"	"0.0000"	"1"	"1"	"1"	"549.79889"	"2196.17373"	"2196.17347"	"0.11"	"0.00006"	"11/146"	"11"	"146"	"11746469.1969604"	"HCD"	"MS2"	"41.28753"	"136.7"	"100.000"	"62.9433"	"20102"	"20102"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.9"	""	"134.7"	""	"160.4"	""	"238.0"	"2.7"	"310.1"	"291.9"	""	"1266"	"50"	"38.000"	"31.000"	"0.000695670696360785"	"20"	"0"	"4.867E-06"	"1.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"732.72949"	"2196.17392"	"2196.17347"	"0.20"	"0.00015"	"13/146"	"13"	"146"	"1736518.63671875"	"HCD"	"MS2"	"0"	"54.9"	"100.000"	"64.4317"	"20710"	"20710"	"20681"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.3"	""	"43.7"	""	"65.2"	""	"93.7"	"0.1"	"143.3"	"120.9"	""	"1271"	"46"	"38.000"	"31.000"	"0.00152445832003688"	"22"	"0"	"8.174E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9815"	"0.0000"	"1"	"1"	"1"	"732.72949"	"2196.17392"	"2196.17347"	"0.20"	"0.00015"	"12/146"	"12"	"146"	"17227624.0360107"	"HCD"	"MS2"	"0.763459"	"127.8"	"35.092"	"51.4445"	"15479"	"15479"	"15462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.6"	""	"101.5"	""	"130.2"	""	"334.6"	"0.6"	"284.4"	"254.4"	""	"1271"	"54"	"38.000"	"31.000"	"0.000260085149258422"	"17"	"0"	"1.111E-05"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8983"	"0.0000"	"1"	"1"	"1"	"732.72949"	"2196.17392"	"2196.17347"	"0.20"	"0.00015"	"11/146"	"11"	"146"	"8883799.88378906"	"HCD"	"MS2"	"0"	"196.8"	"100.000"	"51.1383"	"15353"	"15353"	"15334"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"172.4"	""	"137.7"	""	"154.7"	""	"603.7"	""	"432.9"	"372.0"	""	"1271"	"59"	"38.000"	"31.000"	"8.59242113909963E-05"	"23"	"0"	"2.18E-06"	"1.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"732.72961"	"2196.17429"	"2196.17347"	"0.37"	"0.00027"	"11/146"	"11"	"146"	"19237428.6069336"	"HCD"	"MS2"	"0.7949818"	"138.1"	"32.534"	"51.2445"	"15347"	"15347"	"15330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.3"	""	"115.1"	""	"134.1"	""	"354.0"	"1.3"	"309.2"	"280.8"	""	"1270"	"54"	"38.000"	"31.000"	"0.000255725316796666"	"19"	"0"	"2.037E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"732.72968"	"2196.17447"	"2196.17347"	"0.45"	"0.00033"	"13/146"	"13"	"146"	"2403502.0824585"	"HCD"	"MS2"	"11.34823"	"84.5"	"100.000"	"62.7797"	"20035"	"20035"	"20009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.6"	""	"96.4"	""	"96.1"	""	"150.9"	""	"172.6"	"175.3"	""	"1261"	"36"	"37.000"	"31.000"	"0.0172062049206047"	"16"	"0"	"1.495E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"1098.59131"	"2196.17534"	"2196.17347"	"0.85"	"0.00093"	"10/146"	"10"	"146"	"276446.670959473"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"62.9993"	"20178"	"20178"	"20147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.8"	""	"19.6"	""	"25.9"	""	"43.7"	""	"58.4"	"60.3"	""	"1260"	"51"	"37.000"	"31.000"	"0.000460617622594553"	"18"	"0"	"5.799E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"732.73004"	"2196.17557"	"2196.17347"	"0.95"	"0.00070"	"12/146"	"12"	"146"	"2846914.95574951"	"HCD"	"MS2"	"4.364916"	"105.3"	"100.000"	"64.1046"	"20576"	"20576"	"20553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.1"	""	"119.5"	""	"124.1"	""	"177.0"	"2.6"	"224.9"	"217.7"	""	"1262"	"32"	"38.000"	"31.000"	"0.0401817973692895"	"23"	"0"	"1.441E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"732.73010"	"2196.17575"	"2196.17347"	"1.04"	"0.00076"	"15/146"	"15"	"146"	"1538206.38464355"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"54.9484"	"16840"	"16840"	"16812"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.9"	""	"85.2"	""	"104.9"	""	"123.6"	"2.6"	"145.5"	"129.2"	""	"1261"	"37"	"37.000"	"31.000"	"0.0118218403733651"	"19"	"0"	"3.199E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"732.73010"	"2196.17575"	"2196.17347"	"1.04"	"0.00076"	"11/146"	"11"	"146"	"1937101.99291992"	"HCD"	"MS2"	"20.40456"	"69.9"	"100.000"	"57.8748"	"18036"	"18036"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.2"	""	"78.0"	""	"72.8"	""	"121.0"	"1.8"	"146.7"	"160.0"	""	"1261"	"49"	"37.000"	"31.000"	"0.000715624319281394"	"21"	"0"	"7.55E-06"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"732.73022"	"2196.17612"	"2196.17347"	"1.20"	"0.00088"	"12/146"	"12"	"146"	"17530301.3013306"	"HCD"	"MS2"	"2.618468"	"333.8"	"100.000"	"62.9694"	"20165"	"20165"	"20147"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"402.5"	""	"313.1"	""	"348.8"	""	"586.0"	"0.3"	"790.9"	"735.2"	""	"1249"	"49"	"37.000"	"30.000"	"0.000802661519134789"	"18"	"0"	"2.951E-05"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"732.73230"	"2196.18235"	"2196.17347"	"4.04"	"0.00296"	"13/146"	"13"	"146"	"4141802.03179932"	"HCD"	"MS2"	"26.18253"	"175.5"	"100.000"	"57.4151"	"17902"	"17902"	"17877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.0"	""	"204.7"	""	"206.8"	""	"289.8"	""	"363.5"	"399.6"	""	"1212"	"24"	"37.000"	"30.000"	"0.225669373990268"	"21"	"0.0001889"	"0.0004867"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSIDPNTYITWIDK"	"[K].aTSIDPNTYITWIDk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"3"	"1098.59924"	"2196.19121"	"2196.19526"	"-1.84"	"-0.00202"	"9/152"	"9"	"152"	"143766.060241699"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"74.1739"	"24731"	"24731"	"24703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.8"	""	"12.1"	""	"16.0"	""	"15.1"	""	"25.5"	"19.7"	""	"1232"	"14"	"37.000"	"30.000"	"2.6459443888717"	"16"	"0.0004557"	"0.00254"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSIDPNTYITWIDK"	"[K].aTSIDPNTYITWIDk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.6905"	"0.0000"	"1"	"1"	"1"	"732.73621"	"2196.19406"	"2196.19526"	"-0.54"	"-0.00040"	"15/152"	"15"	"152"	"1626442.85754395"	"HCD"	"MS2"	"2.742976"	"50.1"	"100.000"	"74.0795"	"24692"	"24692"	"24671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.9"	""	"63.2"	""	"61.0"	""	"91.9"	""	"98.6"	"98.9"	""	"1208"	"42"	"37.000"	"30.000"	"0.00427599253768019"	"28"	"0"	"2.283E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSIDPNTYITWIDK"	"[K].aTSIDPNTYITWIDk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"1098.60120"	"2196.19512"	"2196.19526"	"-0.06"	"-0.00007"	"10/152"	"10"	"152"	"198391.794921875"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"74.1557"	"24672"	"24672"	"24641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.9"	""	"13.6"	""	"18.6"	""	"25.5"	""	"31.2"	"29.7"	""	"1223"	"27"	"37.000"	"30.000"	"0.121170377627982"	"18"	"0.0001859"	"0.00032"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSIDPNTYITWIDK"	"[K].aTSIDPNTYITWIDk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"732.73694"	"2196.19626"	"2196.19526"	"0.46"	"0.00034"	"15/152"	"15"	"152"	"1327498.63336182"	"HCD"	"MS2"	"3.26695"	"44.3"	"100.000"	"74.0589"	"24632"	"24632"	"24609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.8"	""	"50.2"	""	"56.5"	""	"84.6"	"1.1"	"93.6"	"80.5"	""	"1212"	"40"	"37.000"	"30.000"	"0.0056947232620217"	"20"	"0"	"2.535E-05"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLASAGGPDNLVLLDPGK"	"[R].tLASAGGPDNLVLLDPGk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"4"	"4"	"0.8095"	"0.0000"	"1"	"1"	"1"	"549.82123"	"2196.26308"	"2196.26400"	"-0.42"	"-0.00023"	"14/180"	"14"	"180"	"2470362.01898193"	"HCD"	"MS2"	"43.73603"	"49.9"	"100.000"	"63.7704"	"20440"	"20440"	"20409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.6"	""	"67.2"	""	"68.9"	""	"82.4"	""	"99.1"	"95.2"	""	"859"	"21"	"36.000"	"29.000"	"0.333398136592023"	"17"	"0"	"4.116E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLASAGGPDNLVLLDPGK"	"[R].tLASAGGPDNLVLLDPGk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.76025"	"2196.26621"	"2196.26400"	"1.00"	"0.00073"	"17/180"	"17"	"180"	"7268389.72418213"	"HCD"	"MS2"	"31.41946"	"179.4"	"100.000"	"63.7567"	"20434"	"20434"	"20409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.2"	""	"227.0"	""	"228.0"	""	"280.3"	""	"366.0"	"368.1"	""	"837"	"28"	"36.000"	"29.000"	"0.0678727525744712"	"14"	"0"	"4.762E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLASAGGPDNLVLLDPGK"	"[R].tLASAGGPDNLVLLDPGk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.76117"	"2196.26896"	"2196.26400"	"2.25"	"0.00165"	"15/180"	"15"	"180"	"7822383.37799072"	"HCD"	"MS2"	"54.25792"	"188.8"	"100.000"	"63.7917"	"20501"	"20501"	"20483"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"241.0"	""	"238.5"	""	"230.8"	""	"311.7"	""	"391.4"	"383.9"	""	"819"	"28"	"36.000"	"29.000"	"0.0644545982998916"	"15"	"0"	"6.527E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KHPEVDVLINFASLR"	"[K].kHPEVDVLINFASLR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.82782"	"2196.28945"	"2196.29049"	"-0.48"	"-0.00026"	"15/158"	"15"	"158"	"4162006.25561523"	"HCD"	"MS2"	"17.50382"	"67.6"	"100.000"	"56.6385"	"17585"	"17585"	"17557"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.3"	""	"96.8"	""	"96.0"	""	"117.3"	""	"127.0"	"120.5"	""	"613"	"21"	"34.000"	"27.000"	"0.237919741246694"	"14"	"0"	"0.0001509"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFTDHMLMVEWNSK"	"[K].tFTDHMLMVEWNSk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"733.04401"	"2197.11747"	"2197.11860"	"-0.52"	"-0.00038"	"7/132"	"7"	"132"	"3330701.34313965"	"HCD"	"MS2"	"81.93153"	"113.3"	"100.000"	"60.4770"	"19148"	"19148"	"19123"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.4"	""	"141.0"	""	"150.9"	""	"176.3"	""	"216.1"	"245.8"	""	"1245"	"25"	"37.000"	"30.000"	"0.18626847362886"	"22"	"0"	"3.74E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFTDHMLMVEWNSK"	"[K].tFTDHMLMVEWNSk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"3"	"3"	"0.6176"	"0.0000"	"1"	"1"	"1"	"733.04529"	"2197.12131"	"2197.11860"	"1.23"	"0.00090"	"8/132"	"8"	"132"	"3742760.84960938"	"HCD"	"MS2"	"27.17664"	"123.7"	"100.000"	"60.3711"	"19051"	"19051"	"19033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.8"	""	"146.0"	""	"156.2"	""	"181.0"	""	"252.7"	"277.2"	""	"1263"	"34"	"38.000"	"31.000"	"0.0238986492248844"	"27"	"0"	"2.564E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLPTAISDWWYMK"	"[K].nNLPTAISDWWYMk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"733.05499"	"2197.15042"	"2197.15162"	"-0.54"	"-0.00040"	"9/138"	"9"	"138"	"321007.028320313"	"HCD"	"MS2"	"13.8625"	"13.1"	"100.000"	"82.4021"	"28076"	"28076"	"28046"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.0"	""	"16.4"	""	"17.7"	""	"18.7"	"2.2"	"25.4"	"25.8"	""	"1338"	"22"	"38.000"	"31.000"	"0.399416606724587"	"15"	"0.001966"	"0.02827"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGnPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); N13(Deamidated); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.1795"	"0.0000"	"1"	"1"	"1"	"733.06543"	"2197.18174"	"2197.15749"	"11.03"	"0.00808"	"13/146"	"13"	"146"	"27730953.2094727"	"HCD"	"MS2"	"22.61872"	"506.0"	"93.715"	"62.9272"	"20095"	"20095"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"602.5"	""	"432.7"	""	"516.2"	""	"937.1"	""	"1211.5"	"1127.6"	""	"1288"	"39"	"38.000"	"31.000"	"0.00749697162940355"	"15"	"7.476E-05"	"0.0001974"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGnPQVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); N13(Deamidated); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.0270"	"0.0000"	"1"	"1"	"1"	"733.07184"	"2197.20096"	"2197.15749"	"19.79"	"0.01449"	"9/146"	"9"	"146"	"7322652.9630127"	"HCD"	"MS2"	"19.12858"	"154.9"	"90.396"	"63.6074"	"20426"	"20426"	"20403"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.4"	""	"157.6"	""	"179.0"	""	"250.8"	""	"349.1"	"325.9"	""	"1195"	"37"	"37.000"	"30.000"	"0.0124261877054446"	"17"	"0"	"0.0001722"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDLSSASAIMGNPQVK"	"[K].fGDLSSASAImGNPqVk.[A]"	"N-Term(TMT6plex); M11(Oxidation); Q15(Deamidated); K17(TMT6plex)"	"1"	"1"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P11517"	"Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0270"	"2"	"2"	"2"	"733.07184"	"2197.20096"	"2197.15749"	"19.79"	"0.01449"	"9/146"	"9"	"146"	"7322652.9630127"	"HCD"	"MS2"	"19.12858"	"154.9"	"90.396"	"63.6074"	"20426"	"20426"	"20403"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"211.4"	""	"157.6"	""	"179.0"	""	"250.8"	""	"349.1"	"325.9"	""	"1195"	"36"	"37.000"	"30.000"	"0.0139103452645484"	"17"	"0.0001308"	"0.0002956"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIVPVLLDASVPPYDK"	"[K].lIVPVLLDASVPPYDk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.11206"	"2197.32163"	"2197.32481"	"-1.45"	"-0.00106"	"10/134"	"10"	"134"	"1079924.00830078"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"86.5458"	"29705"	"29705"	"29689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.6"	""	"27.1"	""	"29.3"	""	"36.5"	""	"48.4"	"47.0"	""	"412"	"54"	"33.000"	"26.000"	"8.7875380873128E-05"	"16"	"0"	"9.449E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIVPVLLDASVPPYDK"	"[K].lIVPVLLDASVPPYDk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.11261"	"2197.32328"	"2197.32481"	"-0.70"	"-0.00051"	"14/134"	"14"	"134"	"1083030.7755127"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"86.5953"	"29777"	"29777"	"29760"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.0"	""	"29.3"	""	"25.7"	""	"43.1"	""	"44.0"	"49.5"	""	"397"	"54"	"32.000"	"25.000"	"8.31305226759068E-05"	"16"	"0"	"6.345E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASTLVHLGEYQAAVDGAR"	"[R].lASTLVHLGEYQAAVDGAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9123"	"0.0000"	"1"	"1"	"1"	"734.06818"	"2200.18998"	"2200.19235"	"-1.08"	"-0.00079"	"19/184"	"19"	"184"	"6520371.73950195"	"HCD"	"MS2"	"1.636727"	"73.5"	"100.000"	"59.2536"	"18648"	"18648"	"18629"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"100.0"	""	"89.8"	""	"86.3"	""	"127.6"	"3.6"	"137.3"	"152.7"	""	"1221"	"57"	"37.000"	"30.000"	"0.000114468414717516"	"21"	"0"	"6.739E-07"	"1.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASTLVHLGEYQAAVDGAR"	"[R].lASTLVHLGEYQAAVDGAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"734.06860"	"2200.19126"	"2200.19235"	"-0.50"	"-0.00036"	"18/184"	"18"	"184"	"6490701.9552002"	"HCD"	"MS2"	"15.58375"	"70.2"	"100.000"	"59.1286"	"18544"	"18544"	"18521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.3"	""	"64.4"	""	"89.7"	""	"125.9"	""	"138.8"	"152.5"	""	"1220"	"78"	"37.000"	"30.000"	"1.01001967771641E-06"	"21"	"0"	"3.675E-07"	"1.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAAPAPSLPPAAAVLPSK"	"[R].sPAAPAPSLPPAAAVLPSk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"4"	"4"	"0.9375"	"0.0000"	"1"	"1"	"1"	"550.83282"	"2200.30947"	"2200.31056"	"-0.50"	"-0.00027"	"18/178"	"18"	"178"	"6696682.18365479"	"HCD"	"MS2"	"25.04152"	"111.4"	"100.000"	"56.4356"	"17502"	"17502"	"17477"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.8"	""	"120.6"	""	"155.2"	""	"195.1"	"3.0"	"234.4"	"228.3"	""	"433"	"48"	"33.000"	"26.000"	"0.000322446673324413"	"18"	"0"	"6.44E-06"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAAPAPSLPPAAAVLPSK"	"[R].sPAAPAPSLPPAAAVLPSk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"4"	"4"	"0.9444"	"0.0000"	"1"	"1"	"1"	"550.83319"	"2200.31093"	"2200.31056"	"0.17"	"0.00009"	"14/178"	"14"	"178"	"6587888.68432617"	"HCD"	"MS2"	"11.58924"	"123.0"	"100.000"	"56.1909"	"17348"	"17348"	"17323"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"128.2"	""	"130.1"	""	"195.9"	""	"194.3"	"2.0"	"241.9"	"275.6"	""	"433"	"36"	"33.000"	"26.000"	"0.00512221614505667"	"17"	"0"	"2.769E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAAPAPSLPPAAAVLPSK"	"[R].sPAAPAPSLPPAAAVLPSk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"734.10858"	"2200.31119"	"2200.31056"	"0.29"	"0.00021"	"14/178"	"14"	"178"	"2947486.36737061"	"HCD"	"MS2"	"10.51141"	"78.6"	"100.000"	"56.4240"	"17443"	"17443"	"17419"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.6"	""	"83.3"	""	"90.8"	""	"149.1"	"0.5"	"175.6"	"164.9"	""	"433"	"45"	"33.000"	"26.000"	"0.000726871934835997"	"15"	"0"	"1.182E-05"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLQTLIPYVLNPSK"	"[K].eQLQTLIPYVLNPSk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"734.43567"	"2201.29245"	"2201.29458"	"-0.96"	"-0.00071"	"11/164"	"11"	"164"	"582207.159606934"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"77.4337"	"25998"	"25998"	"25977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.6"	""	"24.3"	""	"28.6"	""	"34.3"	""	"37.9"	"37.9"	""	"636"	"38"	"35.000"	"28.000"	"0.00456485639806463"	"18"	"0"	"2.803E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLQTLIPYVLNPSK"	"[K].eQLQTLIPYVLNPSk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"734.43579"	"2201.29282"	"2201.29458"	"-0.80"	"-0.00059"	"9/164"	"9"	"164"	"670216.325500488"	"HCD"	"MS2"	"3.219097"	"22.5"	"100.000"	"77.3471"	"26014"	"26014"	"25989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.4"	""	"31.3"	""	"28.1"	""	"36.4"	""	"42.6"	"41.6"	""	"636"	"33"	"35.000"	"28.000"	"0.0165739918131416"	"15"	"0"	"5.844E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLTFEPLTLVPIQTK"	"[R].gSLTFEPLTLVPIQTk.[M]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"734.77649"	"2202.31491"	"2202.31498"	"-0.03"	"-0.00002"	"14/150"	"14"	"150"	"2920225.50726318"	"HCD"	"MS2"	"1.153757"	"64.3"	"100.000"	"80.1358"	"27152"	"27152"	"27135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.1"	""	"95.3"	""	"82.1"	""	"100.6"	""	"114.5"	"115.8"	""	"514"	"36"	"34.000"	"27.000"	"0.00712743266895523"	"16"	"0"	"1.12E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLTFEPLTLVPIQTK"	"[R].gSLTFEPLTLVPIQTk.[M]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"734.77704"	"2202.31656"	"2202.31498"	"0.72"	"0.00053"	"11/150"	"11"	"150"	"2764732.14086914"	"HCD"	"MS2"	"0.9864568"	"65.7"	"100.000"	"80.1481"	"27106"	"27106"	"27089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"92.3"	""	"94.1"	""	"102.0"	""	"100.3"	""	"121.8"	"116.1"	""	"515"	"38"	"34.000"	"27.000"	"0.00413787372650816"	"18"	"0"	"4.497E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEMR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"1102.05518"	"2203.10307"	"2203.10551"	"-1.10"	"-0.00122"	"6/168"	"6"	"168"	"175854.805603027"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"76.0949"	"25510"	"25510"	"25487"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"9.1"	""	"9.8"	""	"13.4"	""	"17.4"	"14.5"	""	"1121"	"24"	"37.000"	"30.000"	"0.207766544559134"	"18"	"0.0001889"	"0.0006246"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEMR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1102.05530"	"2203.10332"	"2203.10551"	"-0.99"	"-0.00109"	"17/168"	"17"	"168"	"678245.76940918"	"HCD"	"MS2"	"8.074183"	"28.8"	"100.000"	"75.8243"	"25352"	"25352"	"25329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.4"	""	"45.6"	""	"42.2"	""	"32.9"	""	"50.7"	"44.9"	""	"1123"	"41"	"37.000"	"30.000"	"0.00424961670554277"	"15"	"0"	"0.0001518"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEMR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"735.03961"	"2203.10428"	"2203.10551"	"-0.56"	"-0.00041"	"16/168"	"16"	"168"	"2349893.61846924"	"HCD"	"MS2"	"37.87476"	"54.3"	"100.000"	"76.0785"	"25504"	"25504"	"25487"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.6"	""	"53.5"	""	"51.3"	""	"108.4"	"1.4"	"123.7"	"126.4"	""	"1126"	"25"	"37.000"	"30.000"	"0.174786704811626"	"14"	"0"	"0.0001069"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEMR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1102.05603"	"2203.10478"	"2203.10551"	"-0.33"	"-0.00036"	"13/168"	"13"	"168"	"661113.136169434"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"75.7727"	"25383"	"25383"	"25359"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.1"	""	"43.0"	""	"45.5"	""	"30.5"	""	"45.0"	"43.2"	""	"1125"	"57"	"37.000"	"30.000"	"0.00011752290736054"	"16"	"0"	"1.97E-05"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEMR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"735.03979"	"2203.10483"	"2203.10551"	"-0.31"	"-0.00022"	"17/168"	"17"	"168"	"3910103.18743896"	"HCD"	"MS2"	"16.9164"	"46.8"	"100.000"	"75.8127"	"25347"	"25347"	"25329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.4"	""	"58.0"	""	"79.9"	""	"69.9"	""	"78.6"	"87.9"	""	"1124"	"56"	"37.000"	"30.000"	"0.000144789249023545"	"16"	"0"	"3.722E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEMR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1102.05640"	"2203.10552"	"2203.10551"	"0.00"	"0.00001"	"6/168"	"6"	"168"	"205111.4453125"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"76.1267"	"25475"	"25475"	"25457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.1"	""	"11.2"	""	"9.5"	""	"14.8"	""	"26.3"	"20.3"	""	"1117"	"22"	"37.000"	"30.000"	"0.32811280338788"	"14"	"0.0001889"	"0.0004548"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEMR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9831"	"0.0000"	"1"	"1"	"1"	"735.04016"	"2203.10593"	"2203.10551"	"0.19"	"0.00014"	"18/168"	"18"	"168"	"4866275.02911377"	"HCD"	"MS2"	"9.282256"	"49.2"	"100.000"	"75.7936"	"25392"	"25392"	"25375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.7"	""	"64.0"	""	"83.2"	""	"73.1"	""	"78.0"	"85.6"	""	"1123"	"59"	"37.000"	"30.000"	"7.52228459989663E-05"	"17"	"0"	"4.724E-06"	"1.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEMR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"735.04041"	"2203.10666"	"2203.10551"	"0.53"	"0.00039"	"15/168"	"15"	"168"	"2285918.19055176"	"HCD"	"MS2"	"29.18856"	"54.1"	"100.000"	"76.1222"	"25474"	"25474"	"25457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.0"	""	"49.0"	""	"57.8"	""	"118.3"	""	"120.4"	"131.7"	""	"1125"	"27"	"37.000"	"30.000"	"0.118337537236864"	"14"	"0"	"9.379E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAAQMLQSDPYSVPAR"	"[K].lVQAAQMLQSDPYSVPAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"735.06238"	"2203.17258"	"2203.17425"	"-0.76"	"-0.00056"	"21/174"	"21"	"174"	"5210361.79595947"	"HCD"	"MS2"	"3.987513"	"43.2"	"85.722"	"62.5775"	"20005"	"20005"	"19987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.6"	""	"59.6"	""	"63.8"	""	"66.9"	""	"69.1"	"85.4"	""	"1376"	"72"	"38.000"	"31.000"	"3.98646943141694E-06"	"27"	"0"	"1.088E-06"	"1.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQAAQMLQSDPYSVPAR"	"[K].lVQAAQMLQSDPYSVPAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"735.06323"	"2203.17514"	"2203.17425"	"0.40"	"0.00030"	"19/174"	"19"	"174"	"4695167.12756348"	"HCD"	"MS2"	"3.006223"	"42.7"	"100.000"	"62.4432"	"19898"	"19898"	"19881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.7"	""	"58.4"	""	"64.2"	""	"56.3"	"3.8"	"66.7"	"89.1"	""	"1362"	"62"	"38.000"	"31.000"	"4.41720049246351E-05"	"25"	"0"	"3.532E-06"	"1.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINLYPLTNYTFGTK"	"[R].tINLYPLTNYTFGTk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"735.40405"	"2204.19760"	"2204.23673"	"-17.75"	"-0.01304"	"11/162"	"11"	"162"	"2530360.30761719"	"HCD"	"MS2"	"8.841553"	"71.0"	"100.000"	"74.7163"	"24900"	"24900"	"24881"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.4"	""	"87.1"	""	"93.4"	""	"119.8"	"0.1"	"144.4"	"153.6"	""	"1290"	"7"	"38.000"	"31.000"	"14.0139226036711"	"14"	"0.0005564"	"0.003624"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINLYPLTNYTFGTK"	"[R].tINLYPLTNYTFGTk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"735.40436"	"2204.19852"	"2204.23673"	"-17.33"	"-0.01274"	"11/162"	"11"	"162"	"2036398.06469727"	"HCD"	"MS2"	"7.156396"	"57.3"	"100.000"	"74.7441"	"24963"	"24963"	"24943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.7"	""	"65.9"	""	"74.3"	""	"91.0"	""	"116.5"	"124.4"	""	"1296"	"10"	"38.000"	"31.000"	"7.17092212017528"	"14"	"0.000494"	"0.002714"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETECTYFSTPLLLGK"	"[K].eTEcTYFSTPLLLGk.[K]"	"N-Term(TMT6plex); C4(Methylthio); K15(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9818"	"0.0000"	"1"	"1"	"1"	"736.05554"	"2206.15207"	"2206.15398"	"-0.87"	"-0.00064"	"15/128"	"15"	"128"	"1675216.16192627"	"HCD"	"MS2"	"6.470034"	"59.0"	"100.000"	"79.9046"	"27057"	"27057"	"27039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.1"	""	"89.7"	""	"106.2"	""	"77.3"	"1.6"	"84.1"	"103.5"	""	"1340"	"55"	"38.000"	"31.000"	"0.000212361020023914"	"17"	"0"	"1.143E-05"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETECTYFSTPLLLGK"	"[K].eTEcTYFSTPLLLGk.[K]"	"N-Term(TMT6plex); C4(Methylthio); K15(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.05573"	"2206.15262"	"2206.15398"	"-0.62"	"-0.00045"	"13/128"	"13"	"128"	"2025418.55950928"	"HCD"	"MS2"	"18.62341"	"81.2"	"100.000"	"79.9560"	"27027"	"27027"	"27009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.6"	""	"130.1"	""	"130.1"	""	"105.7"	""	"139.7"	"133.2"	""	"1343"	"31"	"38.000"	"31.000"	"0.0527285728640663"	"14"	"0"	"3.003E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETECTYFSTPLLLGK"	"[K].eTEcTYFSTPLLLGk.[K]"	"N-Term(TMT6plex); C4(Methylthio); K15(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1103.58105"	"2206.15483"	"2206.15398"	"0.38"	"0.00042"	"11/128"	"11"	"128"	"101033.700256348"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"79.9738"	"27086"	"27086"	"27055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.9"	""	"9.9"	""	"9.8"	""	"6.4"	""	"8.1"	"8.9"	""	"1335"	"22"	"38.000"	"31.000"	"0.392149142813626"	"14"	"0.0001308"	"0.000251"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFLPEEYPMAAPK"	"[K].lELFLPEEYPMAAPk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"1103.61328"	"2206.21929"	"2206.22338"	"-1.86"	"-0.00205"	"8/124"	"8"	"124"	"72025.3714599609"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"82.3657"	"28010"	"28010"	"27984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.0"	""	"4.0"	""	"3.1"	""	"4.4"	""	"5.6"	"6.3"	""	"1211"	"20"	"37.000"	"30.000"	"0.63403633584482"	"15"	"0.0002277"	"0.001202"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFLPEEYPMAAPK"	"[K].lELFLPEEYPMAAPk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"1103.61328"	"2206.21929"	"2206.22338"	"-1.86"	"-0.00205"	"8/124"	"8"	"124"	"96688.3114013672"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"82.3214"	"28043"	"28043"	"28014"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"4.4"	""	"4.6"	""	"6.0"	""	"12.6"	"10.3"	""	"1211"	"15"	"37.000"	"30.000"	"1.77465585999907"	"17"	"0.0001889"	"0.0007402"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFLPEEYPMAAPK"	"[K].lELFLPEEYPMAAPk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"736.07904"	"2206.22257"	"2206.22338"	"-0.37"	"-0.00027"	"12/124"	"12"	"124"	"1052763.88781738"	"HCD"	"MS2"	"0"	"34.2"	"100.000"	"82.4920"	"28112"	"28112"	"28094"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.2"	""	"39.4"	""	"44.2"	""	"52.1"	"0.0"	"74.1"	"82.7"	""	"1202"	"21"	"37.000"	"30.000"	"0.522245218001068"	"15"	"0.0001889"	"0.000591"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFLPEEYPMAAPK"	"[K].lELFLPEEYPMAAPk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"736.07922"	"2206.22312"	"2206.22338"	"-0.12"	"-0.00009"	"14/124"	"14"	"124"	"1993646.5112915"	"HCD"	"MS2"	"2.944593"	"51.8"	"100.000"	"82.1877"	"27988"	"27988"	"27966"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.6"	""	"56.7"	""	"64.7"	""	"74.5"	"1.3"	"108.0"	"114.1"	""	"1192"	"40"	"37.000"	"30.000"	"0.00558786956127824"	"21"	"0"	"0.000145"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFLPEEYPMAAPK"	"[K].lELFLPEEYPMAAPk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"736.07935"	"2206.22348"	"2206.22338"	"0.04"	"0.00003"	"14/124"	"14"	"124"	"2314495.90710449"	"HCD"	"MS2"	"2.67721"	"58.0"	"100.000"	"82.1973"	"27941"	"27941"	"27920"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.2"	""	"64.9"	""	"65.1"	""	"88.9"	""	"112.5"	"135.9"	""	"1189"	"38"	"37.000"	"30.000"	"0.00863280356655913"	"22"	"0.0001889"	"0.0004164"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFLPEEYPMAAPK"	"[K].lELFLPEEYPMAAPk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"4"	"4"	"0.6452"	"0.0000"	"1"	"1"	"1"	"552.31134"	"2206.22353"	"2206.22338"	"0.07"	"0.00004"	"8/124"	"8"	"124"	"1160537.52624512"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"82.3076"	"28037"	"28037"	"28014"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.1"	""	"24.6"	""	"32.5"	""	"25.4"	""	"42.2"	"44.3"	""	"1191"	"31"	"37.000"	"30.000"	"0.0441450248694696"	"25"	"0.0001308"	"0.0002886"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFLPEEYPMAAPK"	"[K].lELFLPEEYPMAAPk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"4"	"4"	"0.8125"	"0.0000"	"1"	"1"	"1"	"552.31134"	"2206.22353"	"2206.22338"	"0.07"	"0.00004"	"6/124"	"6"	"124"	"1157176.44268799"	"HCD"	"MS2"	"2.253039"	"21.4"	"100.000"	"82.2737"	"27972"	"27972"	"27952"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.9"	""	"23.4"	""	"26.8"	""	"21.4"	""	"49.4"	"59.1"	""	"1191"	"32"	"37.000"	"30.000"	"0.0341886353244464"	"20"	"0"	"0.0001752"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELFLPEEYPMAAPK"	"[K].lELFLPEEYPMAAPk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"Q9EQX9"	"Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"736.07947"	"2206.22385"	"2206.22338"	"0.21"	"0.00016"	"5/124"	"5"	"124"	"915027.19140625"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"82.5112"	"28069"	"28069"	"28048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.6"	""	"33.1"	""	"32.0"	""	"60.0"	"0.4"	"73.8"	"78.8"	""	"1184"	"17"	"37.000"	"30.000"	"1.05516823032927"	"15"	"0.0001889"	"0.000631"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQLTSWDEDAWASK"	"[R].vLQLTSWDEDAWASk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1104.08997"	"2207.17266"	"2207.17485"	"-1.00"	"-0.00110"	"11/154"	"11"	"154"	"344479.00592041"	"HCD"	"MS2"	"100"	"27.0"	"100.000"	"75.4358"	"25246"	"25246"	"25215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.3"	""	"31.8"	""	"29.6"	""	"48.6"	""	"45.6"	"52.4"	""	"1383"	"38"	"38.000"	"31.000"	"0.0111376145672577"	"15"	"0"	"0.0001313"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQLTSWDEDAWASK"	"[R].vLQLTSWDEDAWASk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1104.09009"	"2207.17290"	"2207.17485"	"-0.89"	"-0.00098"	"15/154"	"15"	"154"	"439231.835266113"	"HCD"	"MS2"	"0"	"36.3"	"100.000"	"75.4802"	"25212"	"25212"	"25185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.1"	""	"44.4"	""	"47.4"	""	"57.8"	"1.1"	"61.2"	"76.9"	""	"1384"	"57"	"38.000"	"31.000"	"0.00014358401540788"	"16"	"0"	"4.154E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQLTSWDEDAWASK"	"[R].vLQLTSWDEDAWASk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"736.39642"	"2207.17472"	"2207.17485"	"-0.06"	"-0.00005"	"11/154"	"11"	"154"	"4222650.93566895"	"HCD"	"MS2"	"3.384265"	"116.9"	"100.000"	"75.6905"	"25298"	"25298"	"25281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.6"	""	"137.7"	""	"146.5"	""	"207.3"	"0.2"	"214.0"	"228.6"	""	"1407"	"57"	"38.000"	"31.000"	"0.000157494032098283"	"26"	"0"	"4.353E-06"	"1.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQLTSWDEDAWASK"	"[R].vLQLTSWDEDAWASk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7255"	"0.0000"	"1"	"1"	"1"	"736.39642"	"2207.17472"	"2207.17485"	"-0.06"	"-0.00005"	"13/154"	"13"	"154"	"3490765.84216309"	"HCD"	"MS2"	"4.061962"	"107.8"	"100.000"	"75.6759"	"25344"	"25344"	"25327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.6"	""	"137.1"	""	"141.5"	""	"177.1"	"2.5"	"215.5"	"196.7"	""	"1407"	"51"	"38.000"	"31.000"	"0.000605709104661867"	"30"	"0"	"5.072E-06"	"1.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQLTSWDEDAWASK"	"[R].vLQLTSWDEDAWASk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7347"	"0.0000"	"1"	"1"	"1"	"736.39648"	"2207.17490"	"2207.17485"	"0.02"	"0.00002"	"13/154"	"13"	"154"	"2728637.68579102"	"HCD"	"MS2"	"33.36013"	"83.0"	"100.000"	"75.3851"	"25225"	"25225"	"25199"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.8"	""	"118.8"	""	"107.1"	""	"144.7"	""	"147.3"	"151.5"	""	"1407"	"49"	"38.000"	"31.000"	"0.000931674270009446"	"28"	"0"	"4.238E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQLTSWDEDAWASK"	"[R].vLQLTSWDEDAWASk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.39697"	"2207.17636"	"2207.17485"	"0.68"	"0.00050"	"13/154"	"13"	"154"	"2493982.2612915"	"HCD"	"MS2"	"34.96386"	"83.0"	"100.000"	"75.4041"	"25181"	"25181"	"25153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.6"	""	"97.7"	""	"102.2"	""	"147.9"	"0.9"	"156.3"	"169.0"	""	"1398"	"51"	"38.000"	"31.000"	"0.000620122052414534"	"16"	"0"	"3.728E-06"	"1.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SIPAYLAETLYYAMK"	"[R].sIPAYLAETLYYAmk.[G]"	"N-Term(TMT6plex); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"1104.60315"	"2208.19902"	"2208.20265"	"-1.64"	"-0.00181"	"3/128"	"3"	"128"	"78419.3673095703"	"HCD"	"MS2"	"100"	"3.1"	"100.000"	"83.7512"	"28575"	"28575"	"28554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.1"	""	"4.9"	""	"2.9"	""	"6.7"	""	"4.9"	"7.6"	""	"1276"	"3"	"38.000"	"31.000"	"29.5679134791752"	"16"	"0.002361"	"0.03442"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPAYLAETLYYAMK"	"[R].sIPAYLAETLYYAmk.[G]"	"N-Term(TMT6plex); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.73883"	"2208.20194"	"2208.20265"	"-0.32"	"-0.00024"	"16/128"	"16"	"128"	"1716094.24365234"	"HCD"	"MS2"	"19.21178"	"37.7"	"100.000"	"83.8082"	"28649"	"28649"	"28631"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.0"	""	"39.1"	""	"49.9"	""	"99.7"	"1.3"	"68.3"	"67.2"	""	"1275"	"54"	"38.000"	"31.000"	"0.000270072390856583"	"16"	"0"	"5.037E-07"	"1.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPAYLAETLYYAMK"	"[R].sIPAYLAETLYYAmk.[G]"	"N-Term(TMT6plex); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.73901"	"2208.20249"	"2208.20265"	"-0.07"	"-0.00005"	"15/128"	"15"	"128"	"1842822.79174805"	"HCD"	"MS2"	"9.131433"	"40.8"	"100.000"	"83.7651"	"28581"	"28581"	"28565"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.7"	""	"36.3"	""	"40.1"	""	"110.5"	"0.1"	"82.4"	"80.2"	""	"1276"	"42"	"38.000"	"31.000"	"0.00368825278244848"	"15"	"0"	"1.384E-05"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPAYLAETLYYAMK"	"[R].sIPAYLAETLYYAmk.[G]"	"N-Term(TMT6plex); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.73901"	"2208.20249"	"2208.20265"	"-0.07"	"-0.00005"	"11/128"	"11"	"128"	"1484552.20263672"	"HCD"	"MS2"	"7.922369"	"40.8"	"100.000"	"84.0784"	"28709"	"28709"	"28692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.3"	""	"38.4"	""	"49.8"	""	"98.8"	""	"76.7"	"82.3"	""	"1276"	"43"	"38.000"	"31.000"	"0.00299792441290128"	"15"	"0"	"0.0001055"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPAYLAETLYYAMK"	"[R].sIPAYLAETLYYAmk.[G]"	"N-Term(TMT6plex); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.73914"	"2208.20285"	"2208.20265"	"0.09"	"0.00007"	"13/128"	"13"	"128"	"1502262.74578857"	"HCD"	"MS2"	"8.473405"	"37.4"	"100.000"	"84.1074"	"28771"	"28771"	"28753"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.8"	""	"38.6"	""	"46.6"	""	"89.6"	"0.2"	"71.3"	"72.0"	""	"1275"	"41"	"38.000"	"31.000"	"0.00474766633365068"	"15"	"0"	"1.084E-05"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKGEHPGLSIGDVAK"	"[K].ikGEHPGLSIGDVAk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.83978"	"2208.33730"	"2208.33191"	"2.44"	"0.00135"	"9/154"	"9"	"154"	"55583516.9106445"	"HCD"	"MS2"	"26.14128"	"286.7"	"18.069"	"37.8161"	"9924"	"9924"	"9905"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"426.7"	""	"456.5"	""	"372.7"	""	"469.3"	"0.4"	"515.0"	"472.9"	""	"337"	"11"	"32.000"	"25.000"	"1.467573649076"	"13"	"0.0001308"	"0.0003076"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IKGEHPGLSIGDVAK"	"[K].ikGEHPGLSIGDVAk.[K]"	"N-Term(TMT6plex); K2(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"4"	"4"	"0.2083"	"0.0000"	"1"	"1"	"1"	"552.84045"	"2208.33999"	"2208.33191"	"3.66"	"0.00202"	"10/154"	"10"	"154"	"81494700.0029297"	"HCD"	"MS2"	"10.01748"	"312.0"	"14.948"	"37.6656"	"9819"	"9819"	"9800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"493.5"	""	"513.7"	""	"473.6"	""	"506.9"	"1.0"	"477.3"	"481.6"	""	"309"	"24"	"31.000"	"24.000"	"0.0629402529207354"	""	"0"	"0.0001564"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVFITDDFHDMMPK"	"[R].rVFITDDFHDMMPk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"1"	"4"	"4"	"0.8333"	"0.0000"	"1"	"1"	"1"	"553.29279"	"2210.14931"	"2210.15024"	"-0.42"	"-0.00023"	"9/140"	"9"	"140"	"11176355.7363892"	"HCD"	"MS2"	"13.0882"	"188.1"	"100.000"	"51.0694"	"15325"	"15325"	"15302"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"342.7"	""	"318.4"	""	"318.7"	""	"230.5"	""	"275.4"	"289.7"	""	"1362"	"12"	"38.000"	"31.000"	"4.65743831798654"	"15"	"0.0001308"	"0.0002489"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVFITDDFHDMMPK"	"[R].rVFITDDFHDMMPk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"1"	"4"	"4"	"0.9286"	"0.0000"	"1"	"1"	"1"	"553.29333"	"2210.15151"	"2210.15024"	"0.58"	"0.00032"	"6/140"	"6"	"140"	"9567662.36077881"	"HCD"	"MS2"	"16.58399"	"163.5"	"100.000"	"50.8646"	"15191"	"15191"	"15170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"288.6"	""	"277.4"	""	"290.5"	""	"206.1"	""	"247.1"	"236.2"	""	"1366"	"14"	"38.000"	"31.000"	"2.79525030595597"	"15"	"0"	"0.0001467"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGSDKESILELITSR"	"[K].gFGSDkESILELITSR.[S]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.41998"	"2210.24540"	"2210.24327"	"0.96"	"0.00071"	"20/162"	"20"	"162"	"3038118.16101074"	"HCD"	"MS2"	"0"	"163.0"	"100.000"	"73.3436"	"24340"	"24340"	"24321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"238.5"	""	"155.8"	""	"181.7"	""	"333.7"	""	"326.5"	"313.1"	""	"976"	"22"	"36.000"	"29.000"	"0.299515858520419"	"14"	"0"	"3.096E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGSDKESILELITSR"	"[K].gFGSDkESILELITSR.[S]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.41998"	"2210.24540"	"2210.24327"	"0.96"	"0.00071"	"10/162"	"10"	"162"	"3047683.01428223"	"HCD"	"MS2"	"23.25077"	"156.6"	"100.000"	"73.2978"	"24373"	"24373"	"24351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"243.0"	""	"162.6"	""	"191.1"	""	"291.5"	"2.7"	"306.9"	"286.6"	""	"976"	"25"	"36.000"	"29.000"	"0.140094092402805"	"14"	"0"	"3.456E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITVAALDAANLLASVPASQR"	"[K].iTVAALDAANLLASVPASQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.9636"	"0.0000"	"1"	"1"	"1"	"737.42755"	"2210.26810"	"2210.27060"	"-1.13"	"-0.00083"	"12/204"	"12"	"204"	"521096.099182129"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"84.6175"	"28928"	"28928"	"28907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.3"	""	"15.1"	""	"17.0"	""	"26.9"	""	"34.3"	"32.6"	""	"799"	"55"	"36.000"	"29.000"	"0.000122890067748891"	"18"	"0"	"5.703E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPADIWPLDPLNGAWFR"	"[R].gGPADIWPLDPLNGAWFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.72278"	"2211.15378"	"2211.15484"	"-0.48"	"-0.00035"	"5/156"	"5"	"156"	"202469.040771484"	"HCD"	"MS2"	"26.23077"	"4.1"	"100.000"	"95.7205"	"32936"	"32936"	"32928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.2"	""	"6.2"	""	"5.8"	""	"8.1"	""	"9.1"	"8.1"	""	"1315"	"3"	"38.000"	"31.000"	"32.1288926267913"	"13"	"0.003286"	"0.07232"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQGFESSTFQGYFK"	"[R].eVQGFESSTFQGYFk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"738.04852"	"2212.13102"	"2212.13266"	"-0.74"	"-0.00055"	"10/152"	"10"	"152"	"2284082.74420166"	"HCD"	"MS2"	"13.88965"	"85.2"	"100.000"	"62.5354"	"19935"	"19935"	"19913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.4"	""	"93.6"	""	"110.2"	""	"150.6"	"2.5"	"168.8"	"173.2"	""	"1281"	"31"	"38.000"	"31.000"	"0.053274469539126"	"16"	"0"	"6.074E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQGFESSTFQGYFK"	"[R].eVQGFESSTFQGYFk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"738.04871"	"2212.13156"	"2212.13266"	"-0.49"	"-0.00036"	"10/152"	"10"	"152"	"2582812.1081543"	"HCD"	"MS2"	"11.16607"	"93.1"	"100.000"	"62.6190"	"20022"	"20022"	"20003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.6"	""	"117.0"	""	"128.1"	""	"156.2"	"2.1"	"178.1"	"188.9"	""	"1280"	"33"	"38.000"	"31.000"	"0.0350090216252142"	"16"	"0"	"4.631E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINQEVYNFLATAGAK"	"[K].dINQEVYNFLATAGAk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"738.07159"	"2212.20023"	"2212.20140"	"-0.53"	"-0.00039"	"12/168"	"12"	"168"	"1604875.83868408"	"HCD"	"MS2"	"0"	"43.0"	"100.000"	"83.4032"	"28433"	"28433"	"28414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.2"	""	"45.7"	""	"46.2"	""	"81.2"	""	"93.2"	"76.0"	""	"1340"	"47"	"38.000"	"31.000"	"0.00123900997471531"	"20"	"0"	"2.275E-06"	"1.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINQEVYNFLATAGAK"	"[K].dINQEVYNFLATAGAk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"738.07172"	"2212.20060"	"2212.20140"	"-0.37"	"-0.00027"	"16/168"	"16"	"168"	"963319.459350586"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"83.4004"	"28483"	"28483"	"28461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.7"	""	"27.5"	""	"36.7"	""	"45.5"	""	"61.0"	"52.1"	""	"1347"	"48"	"38.000"	"31.000"	"0.001060077459218"	"17"	"0"	"1.531E-06"	"1.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDKDGNGYISAAELR"	"[R].vFDkDGNGYISAAELR.[H]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"738.40198"	"2213.19138"	"2213.19665"	"-2.38"	"-0.00176"	"12/166"	"12"	"166"	"1587624.77264404"	"HCD"	"MS2"	"9.181"	"106.8"	"100.000"	"48.5844"	"14316"	"14316"	"14287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.0"	""	"145.9"	""	"150.4"	""	"197.0"	""	"171.6"	"171.2"	""	"1317"	"35"	"38.000"	"31.000"	"0.0186447162923389"	"15"	"0"	"3.934E-06"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDKDGNGYISAAELR"	"[R].vFDkDGNGYISAAELR.[H]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"738.40430"	"2213.19834"	"2213.19665"	"0.76"	"0.00056"	"10/166"	"10"	"166"	"1336896.87872314"	"HCD"	"MS2"	"0"	"94.1"	"100.000"	"48.3555"	"14175"	"14175"	"14144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.1"	""	"124.0"	""	"133.0"	""	"160.5"	""	"167.2"	"167.3"	""	"1267"	"15"	"38.000"	"31.000"	"1.86959104509316"	"13"	"0"	"8.303E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLMDGVRPSSPEALVGK"	"[K].vLMDGVRPSSPEALVGk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"738.42853"	"2213.27103"	"2213.27279"	"-0.80"	"-0.00059"	"17/164"	"17"	"164"	"2362264.05029297"	"HCD"	"MS2"	"70.43731"	"130.5"	"100.000"	"51.6175"	"15499"	"15499"	"15474"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"227.5"	""	"182.2"	""	"140.5"	""	"185.5"	""	"253.5"	"248.7"	""	"854"	"28"	"36.000"	"29.000"	"0.0684585781824648"	"14"	"0"	"3.403E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLMDGVRPSSPEALVGK"	"[K].vLMDGVRPSSPEALVGk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"738.42871"	"2213.27158"	"2213.27279"	"-0.55"	"-0.00041"	"19/164"	"19"	"164"	"15840418.0509033"	"HCD"	"MS2"	"31.1794"	"334.1"	"48.989"	"51.2903"	"15365"	"15365"	"15346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"678.7"	""	"497.1"	""	"364.9"	""	"458.7"	""	"569.9"	"597.1"	""	"853"	"32"	"36.000"	"29.000"	"0.0262372936210759"	"15"	"0"	"2.228E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLMDGVRPSSPEALVGK"	"[K].vLMDGVRPSSPEALVGk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"738.42889"	"2213.27213"	"2213.27279"	"-0.30"	"-0.00022"	"20/164"	"20"	"164"	"15806067.0703125"	"HCD"	"MS2"	"37.84514"	"353.5"	"51.841"	"51.4541"	"15482"	"15482"	"15462"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"702.2"	""	"537.4"	""	"368.5"	""	"488.9"	""	"617.7"	"633.1"	""	"842"	"24"	"36.000"	"29.000"	"0.179176931929306"	"14"	"0"	"6.565E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLMDGVRPSSPEALVGK"	"[K].vLMDGVRPSSPEALVGk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"738.42920"	"2213.27304"	"2213.27279"	"0.11"	"0.00008"	"15/164"	"15"	"164"	"2486654.84899902"	"HCD"	"MS2"	"45.05447"	"132.7"	"100.000"	"51.7826"	"15617"	"15617"	"15590"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"224.4"	""	"185.5"	""	"154.6"	""	"181.4"	""	"268.2"	"245.5"	""	"852"	"27"	"36.000"	"29.000"	"0.0931986451802509"	"14"	"0"	"2.423E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLMDGVRPSSPEALVGK"	"[K].vLMDGVRPSSPEALVGk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"0.9000"	"0.0000"	"1"	"1"	"1"	"554.07373"	"2213.27309"	"2213.27279"	"0.13"	"0.00007"	"12/164"	"12"	"164"	"6942317.28027344"	"HCD"	"MS2"	"33.63854"	"181.9"	"100.000"	"51.6169"	"15549"	"15549"	"15526"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"265.5"	""	"222.0"	""	"194.3"	""	"311.4"	""	"368.4"	"378.4"	""	"848"	"10"	"36.000"	"29.000"	"4.43982504373581"	"14"	"0"	"5.777E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLMDGVRPSSPEALVGK"	"[K].vLMDGVRPSSPEALVGk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.07410"	"2213.27456"	"2213.27279"	"0.80"	"0.00044"	"14/164"	"14"	"164"	"6678431.96826172"	"HCD"	"MS2"	"15.97802"	"160.8"	"100.000"	"51.3570"	"15393"	"15393"	"15362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"298.5"	""	"230.9"	""	"188.4"	""	"218.4"	"1.9"	"295.8"	"288.0"	""	"837"	"13"	"36.000"	"29.000"	"2.35339844592161"	"13"	"0"	"0.0001131"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLMDGVRPSSPEALVGK"	"[K].vLMDGVRPSSPEALVGk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.07477"	"2213.27724"	"2213.27279"	"2.01"	"0.00111"	"14/164"	"14"	"164"	"6941792.56542969"	"HCD"	"MS2"	"9.501114"	"174.5"	"100.000"	"51.5156"	"15508"	"15508"	"15478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"341.8"	""	"265.7"	""	"211.4"	""	"220.8"	"0.8"	"299.4"	"311.0"	""	"820"	"13"	"36.000"	"29.000"	"1.97144132864389"	"13"	"0"	"0.0001779"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLDSVLPHLYNETK"	"[R].dLLDSVLPHLYNETk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"739.08325"	"2215.23520"	"2215.23745"	"-1.02"	"-0.00075"	"13/144"	"13"	"144"	"334969.755554199"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"73.1360"	"24256"	"24256"	"24225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.3"	""	"18.5"	""	"23.0"	""	"31.8"	""	"31.8"	"33.9"	""	"1068"	"35"	"37.000"	"30.000"	"0.0175606770887775"	"16"	"0"	"0.0001362"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLDSVLPHLYNETK"	"[R].dLLDSVLPHLYNETk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"739.08392"	"2215.23722"	"2215.23745"	"-0.11"	"-0.00008"	"13/144"	"13"	"144"	"464282.97644043"	"HCD"	"MS2"	"3.318619"	"21.1"	"100.000"	"73.0303"	"24264"	"24264"	"24239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.7"	""	"23.2"	""	"24.9"	""	"36.7"	""	"41.2"	"47.3"	""	"1067"	"43"	"37.000"	"30.000"	"0.00299319095213323"	"20"	"0"	"2.577E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPIANGNNQSPIDIK"	"[K].lYPIANGNNQSPIDIk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"739.08832"	"2215.25040"	"2215.24869"	"0.77"	"0.00057"	"15/146"	"15"	"146"	"6360252.67205811"	"HCD"	"MS2"	"9.893754"	"203.1"	"100.000"	"57.8585"	"18029"	"18029"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.2"	""	"304.8"	""	"331.1"	""	"290.1"	""	"308.7"	"315.9"	""	"991"	"34"	"36.000"	"29.000"	"0.0207512211515928"	"16"	"0"	"7.096E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLDSVLPHLYNETK"	"[R].dLLDSVLPHLYNETk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"739.09039"	"2215.25663"	"2215.23745"	"8.65"	"0.00639"	"15/144"	"15"	"144"	"2667555.85772705"	"HCD"	"MS2"	"18.77207"	"76.7"	"100.000"	"72.5303"	"24060"	"24060"	"24031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.3"	""	"112.7"	""	"127.9"	""	"91.8"	"1.3"	"121.2"	"143.2"	""	"932"	"17"	"36.000"	"29.000"	"0.940558725475607"	"18"	"0.0001308"	"0.0002501"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.57697"	"2215.28603"	"2215.28910"	"-1.38"	"-0.00077"	"14/136"	"14"	"136"	"10408994.09729"	"HCD"	"MS2"	"7.067708"	"167.7"	"100.000"	"63.6008"	"20423"	"20423"	"20403"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"219.6"	""	"190.7"	"3.0"	"223.8"	""	"284.6"	"1.6"	"346.6"	"321.9"	""	"728"	"38"	"35.000"	"28.000"	"0.00526140076551517"	"15"	"0"	"2.22E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.10052"	"2215.28702"	"2215.28910"	"-0.94"	"-0.00069"	"17/136"	"17"	"136"	"7176702.23535156"	"HCD"	"MS2"	"17.41622"	"173.3"	"100.000"	"63.4046"	"20343"	"20343"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"245.7"	""	"214.2"	""	"240.9"	""	"288.5"	"2.0"	"337.2"	"314.2"	""	"726"	"40"	"35.000"	"28.000"	"0.00383624755844558"	"15"	"0"	"1.477E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.57727"	"2215.28725"	"2215.28910"	"-0.83"	"-0.00046"	"14/136"	"14"	"136"	"24749197.3571777"	"HCD"	"MS2"	"3.47768"	"127.3"	"33.163"	"63.8579"	"20475"	"20475"	"20457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"173.6"	""	"142.1"	""	"161.1"	""	"247.5"	""	"248.7"	"235.1"	""	"723"	"35"	"35.000"	"28.000"	"0.0126796802433854"	"15"	"0"	"1.224E-05"	"1.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.57745"	"2215.28798"	"2215.28910"	"-0.50"	"-0.00028"	"14/136"	"14"	"136"	"6581095.86767578"	"HCD"	"MS2"	"1.576061"	"107.4"	"100.000"	"64.2276"	"20679"	"20679"	"20659"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.0"	""	"115.1"	""	"134.0"	""	"195.2"	"1.3"	"214.9"	"212.5"	""	"707"	"33"	"35.000"	"28.000"	"0.018896850104683"	"15"	"0"	"1.013E-05"	"1.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"739.10107"	"2215.28867"	"2215.28910"	"-0.19"	"-0.00014"	"17/136"	"17"	"136"	"52730393.1650391"	"HCD"	"MS2"	"0"	"163.0"	"16.486"	"63.6576"	"20394"	"20394"	"20377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.9"	""	"188.4"	""	"195.8"	""	"296.3"	""	"344.8"	"323.6"	""	"708"	"46"	"35.000"	"28.000"	"0.000885122258040536"	"20"	"0"	"1.589E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.10114"	"2215.28885"	"2215.28910"	"-0.11"	"-0.00008"	"17/136"	"17"	"136"	"12586626.9650879"	"HCD"	"MS2"	"0"	"141.6"	"56.511"	"64.2844"	"20650"	"20650"	"20633"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.0"	""	"152.2"	""	"182.7"	""	"236.4"	""	"306.4"	"287.8"	""	"708"	"44"	"35.000"	"28.000"	"0.00140282424126425"	"15"	"0"	"9.454E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.10114"	"2215.28885"	"2215.28910"	"-0.11"	"-0.00008"	"17/136"	"17"	"136"	"7178693.5814209"	"HCD"	"MS2"	"0"	"155.4"	"98.725"	"64.3402"	"20725"	"20725"	"20707"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.9"	""	"168.3"	""	"208.1"	""	"264.4"	""	"324.0"	"308.8"	""	"708"	"41"	"35.000"	"28.000"	"0.0027542493906809"	"15"	"0"	"3.654E-06"	"1.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.10120"	"2215.28904"	"2215.28910"	"-0.03"	"-0.00002"	"12/136"	"12"	"136"	"5879698.42047119"	"HCD"	"MS2"	"50.51112"	"150.3"	"100.000"	"63.3532"	"20269"	"20269"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"225.9"	""	"182.8"	""	"211.1"	""	"232.3"	""	"283.5"	"289.5"	""	"691"	"36"	"35.000"	"28.000"	"0.00896288969612051"	"15"	"0"	"7.88E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.57782"	"2215.28945"	"2215.28910"	"0.16"	"0.00009"	"15/136"	"15"	"136"	"9997195.65405273"	"HCD"	"MS2"	"1.032916"	"118.3"	"73.290"	"64.1669"	"20602"	"20602"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.3"	""	"118.1"	""	"162.4"	""	"225.2"	"1.4"	"237.7"	"224.7"	""	"691"	"40"	"35.000"	"28.000"	"0.00375360052959696"	"15"	"0"	"1.171E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.57794"	"2215.28994"	"2215.28910"	"0.38"	"0.00021"	"14/136"	"14"	"136"	"26069853.7858887"	"HCD"	"MS2"	"3.898993"	"181.1"	"42.047"	"63.9092"	"20549"	"20549"	"20531"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"240.6"	""	"209.3"	""	"230.8"	""	"320.3"	"0.3"	"372.7"	"344.9"	""	"686"	"33"	"35.000"	"28.000"	"0.0184201906154996"	"15"	"0"	"2.73E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.57794"	"2215.28994"	"2215.28910"	"0.38"	"0.00021"	"14/136"	"14"	"136"	"7661753.21710205"	"HCD"	"MS2"	"8.740508"	"136.9"	"100.000"	"63.5445"	"20347"	"20347"	"20329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.9"	""	"162.5"	""	"175.4"	""	"244.9"	""	"277.1"	"256.3"	""	"686"	"36"	"35.000"	"28.000"	"0.00840028691952747"	"15"	"0"	"2.265E-05"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"739.10199"	"2215.29142"	"2215.28910"	"1.05"	"0.00077"	"17/136"	"17"	"136"	"73737010.1000977"	"HCD"	"MS2"	"0"	"168.7"	"12.236"	"64.0223"	"20596"	"20596"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"216.1"	""	"190.7"	""	"211.6"	""	"322.7"	""	"326.4"	"337.7"	""	"674"	"48"	"35.000"	"28.000"	"0.00053165499788868"	"20"	"0"	"1.858E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"739.10248"	"2215.29288"	"2215.28910"	"1.71"	"0.00126"	"17/136"	"17"	"136"	"57975293.3383789"	"HCD"	"MS2"	"0"	"263.4"	"24.409"	"63.7089"	"20468"	"20468"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.3"	""	"303.8"	""	"346.8"	""	"462.0"	""	"539.9"	"498.9"	""	"670"	"47"	"35.000"	"28.000"	"0.000644235729184903"	"20"	"0"	"1.547E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHFPLATYAPVISAEK"	"[R].iHFPLATYAPVISAEk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"739.10333"	"2215.29544"	"2215.28910"	"2.87"	"0.00212"	"17/136"	"17"	"136"	"75474567.421875"	"HCD"	"MS2"	"0"	"182.0"	"12.649"	"63.9709"	"20522"	"20522"	"20505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.7"	""	"200.1"	""	"222.2"	""	"326.0"	""	"372.9"	"364.4"	""	"651"	"47"	"35.000"	"28.000"	"0.000694306119229211"	"19"	"0"	"4.729E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPIANGNNQSPIDIK"	"[K].lYPIAnGNNQSPIDIk.[T]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"739.41492"	"2216.23020"	"2216.23270"	"-1.13"	"-0.00084"	"16/146"	"16"	"146"	"7038493.36773682"	"HCD"	"MS2"	"8.051836"	"174.9"	"100.000"	"62.2593"	"19876"	"19876"	"19859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"350.1"	""	"230.6"	""	"257.6"	""	"273.3"	"1.3"	"269.5"	"269.0"	""	"1233"	"35"	"37.000"	"30.000"	"0.0194506035031046"	"16"	"0"	"1.925E-05"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPIANGNNQSPIDIK"	"[K].lYPIAnGNNQSPIDIk.[T]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.1087"	"0.0000"	"1"	"1"	"1"	"739.41547"	"2216.23185"	"2216.23270"	"-0.39"	"-0.00029"	"13/146"	"13"	"146"	"6618628.9810791"	"HCD"	"MS2"	"6.235609"	"154.5"	"94.077"	"62.1803"	"19790"	"19790"	"19769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"331.4"	""	"203.9"	""	"225.4"	""	"242.0"	"4.0"	"212.2"	"238.7"	""	"1226"	"46"	"37.000"	"30.000"	"0.00139784969013626"	"19"	"0"	"8.896E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPIANGNNQSPIDIK"	"[K].lYPIAnGNNQSPIDIk.[T]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"1108.61975"	"2216.23223"	"2216.23270"	"-0.22"	"-0.00024"	"10/146"	"10"	"146"	"230277.836791992"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"62.3629"	"19918"	"19918"	"19891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.5"	""	"19.2"	""	"25.6"	""	"23.6"	""	"19.5"	"18.4"	""	"1228"	"35"	"37.000"	"30.000"	"0.019461144223087"	"16"	"0.0003839"	"0.001977"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPIANGNNQSPIDIK"	"[K].lYPIANGnNQSPIDIk.[T]"	"N-Term(TMT6plex); N8(Deamidated); K16(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.1818"	"0.0000"	"1"	"1"	"1"	"739.41632"	"2216.23441"	"2216.23270"	"0.77"	"0.00057"	"16/146"	"16"	"146"	"3132391.78521729"	"HCD"	"MS2"	"27.76941"	"145.7"	"100.000"	"60.4981"	"19103"	"19103"	"19081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"397.9"	""	"207.1"	""	"202.8"	""	"185.5"	"0.6"	"198.7"	"179.1"	""	"1215"	"44"	"37.000"	"30.000"	"0.00259744453337089"	"16"	"0"	"9.622E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPIANGNNQSPIDIK"	"[K].lYPIAnGNNQSPIDIk.[T]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.1818"	"0.0000"	"1"	"2"	"2"	"739.41632"	"2216.23441"	"2216.23270"	"0.77"	"0.00057"	"15/146"	"15"	"146"	"3132391.78521729"	"HCD"	"MS2"	"27.76941"	"145.7"	"100.000"	"60.4981"	"19103"	"19103"	"19081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"397.9"	""	"207.1"	""	"202.8"	""	"185.5"	"0.6"	"198.7"	"179.1"	""	"1215"	"44"	"37.000"	"30.000"	"0.00266407398898304"	"16"	"0"	"1.139E-05"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPIANGNNQSPIDIK"	"[K].lYPIANGNNqSPIDIk.[T]"	"N-Term(TMT6plex); Q10(Deamidated); K16(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.1277"	"0.0000"	"1"	"1"	"1"	"1108.62122"	"2216.23516"	"2216.23270"	"1.11"	"0.00123"	"14/146"	"14"	"146"	"278570.437072754"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"62.1574"	"19781"	"19781"	"19753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.9"	""	"24.6"	""	"28.0"	""	"24.1"	""	"25.4"	"26.6"	""	"1206"	"47"	"37.000"	"30.000"	"0.00111767956891913"	"17"	"0"	"0.0001383"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPIANGNNQSPIDIK"	"[K].lYPIANGNnQSPIDIk.[T]"	"N-Term(TMT6plex); N9(Deamidated); K16(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.1277"	"0.0000"	"1"	"2"	"2"	"1108.62122"	"2216.23516"	"2216.23270"	"1.11"	"0.00123"	"14/146"	"14"	"146"	"278570.437072754"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"62.1574"	"19781"	"19781"	"19753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.9"	""	"24.6"	""	"28.0"	""	"24.1"	""	"25.4"	"26.6"	""	"1206"	"47"	"37.000"	"30.000"	"0.00111767956891913"	"17"	"0"	"0.0001383"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPIANGNNQSPIDIK"	"[K].lYPIANGnNQSPIDIk.[T]"	"N-Term(TMT6plex); N8(Deamidated); K16(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.1277"	"0.0000"	"1"	"3"	"3"	"1108.62122"	"2216.23516"	"2216.23270"	"1.11"	"0.00123"	"14/146"	"14"	"146"	"278570.437072754"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"62.1574"	"19781"	"19781"	"19753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.9"	""	"24.6"	""	"28.0"	""	"24.1"	""	"25.4"	"26.6"	""	"1206"	"47"	"37.000"	"30.000"	"0.00111767956891913"	"17"	"0"	"0.0001383"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPIANGNNQSPIDIK"	"[K].lYPIAnGNNQSPIDIk.[T]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.2745"	"0.0000"	"1"	"1"	"1"	"739.41663"	"2216.23532"	"2216.23270"	"1.18"	"0.00087"	"15/146"	"15"	"146"	"2920744.59143066"	"HCD"	"MS2"	"18.57247"	"133.2"	"100.000"	"60.6591"	"19222"	"19222"	"19203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"329.5"	""	"175.8"	""	"186.5"	""	"187.5"	"1.5"	"183.2"	"191.3"	""	"1207"	"51"	"37.000"	"30.000"	"0.000430206803681354"	"18"	"0"	"1.586E-05"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNETTAVALAYGIYK"	"[R].lMNETTAVALAYGIYk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1108.62134"	"2216.23540"	"2216.24010"	"-2.12"	"-0.00235"	"6/150"	"6"	"150"	"89052.2590942383"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"78.3631"	"26429"	"26429"	"26399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"11.5"	""	"10.2"	""	"7.4"	""	"12.4"	"11.1"	""	"1207"	"10"	"37.000"	"30.000"	"6.52645389608305"	"13"	"0.0008731"	"0.009368"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNETTAVALAYGIYK"	"[R].lMNETTAVALAYGIYk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1108.62219"	"2216.23711"	"2216.24010"	"-1.35"	"-0.00149"	"4/150"	"4"	"150"	"58329.3243408203"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"78.4885"	"26429"	"26429"	"26401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.5"	""	"9.8"	""	"10.0"	""	"4.7"	""	"7.9"	"7.6"	""	"1196"	"14"	"37.000"	"30.000"	"2.38068087990991"	"13"	"0.003107"	"0.06185"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNETTAVALAYGIYK"	"[R].lMNETTAVALAYGIYk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"739.41772"	"2216.23862"	"2216.24010"	"-0.67"	"-0.00049"	"14/150"	"14"	"150"	"1069101.02520752"	"HCD"	"MS2"	"20.94761"	"41.1"	"100.000"	"78.5456"	"26503"	"26503"	"26479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.2"	""	"62.2"	""	"82.6"	""	"56.9"	""	"50.7"	"62.5"	""	"1188"	"32"	"37.000"	"30.000"	"0.0373926672617176"	"18"	"0"	"4.694E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNETTAVALAYGIYK"	"[R].lMNETTAVALAYGIYk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.9841"	"0.0000"	"1"	"1"	"1"	"739.41809"	"2216.23972"	"2216.24010"	"-0.17"	"-0.00013"	"17/150"	"17"	"150"	"1905108.72735596"	"HCD"	"MS2"	"7.434105"	"53.0"	"100.000"	"78.3500"	"26372"	"26372"	"26353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.0"	""	"87.3"	""	"87.8"	""	"69.0"	""	"79.2"	"93.1"	""	"1174"	"63"	"37.000"	"30.000"	"3.12347548189608E-05"	"18"	"0"	"2.167E-06"	"1.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNETTAVALAYGIYK"	"[R].lMNETTAVALAYGIYk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.41858"	"2216.24118"	"2216.24010"	"0.49"	"0.00036"	"16/150"	"16"	"150"	"1312611.20153809"	"HCD"	"MS2"	"8.092068"	"37.3"	"100.000"	"78.2248"	"26372"	"26372"	"26351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.0"	""	"64.9"	""	"58.7"	""	"48.7"	""	"62.5"	"66.2"	""	"1178"	"50"	"37.000"	"30.000"	"0.000527369846908711"	"16"	"0"	"2.787E-06"	"1.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTPDEYLEHSLTLK"	"[K].lVTPDEYLEHSLTLk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"3"	"3"	"0.9492"	"0.0000"	"1"	"1"	"1"	"739.42401"	"2216.25748"	"2216.25786"	"-0.17"	"-0.00013"	"15/132"	"15"	"132"	"4570707.81097412"	"HCD"	"MS2"	"8.464045"	"168.9"	"100.000"	"65.9536"	"21384"	"21384"	"21363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.5"	""	"207.0"	""	"189.3"	""	"292.0"	"5.7"	"331.8"	"355.0"	""	"1075"	"59"	"37.000"	"30.000"	"6.28605922673181E-05"	"19"	"0"	"3.515E-05"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTPDEYLEHSLTLK"	"[K].lVTPDEYLEHSLTLk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.42407"	"2216.25766"	"2216.25786"	"-0.09"	"-0.00006"	"13/132"	"13"	"132"	"4653988.77362061"	"HCD"	"MS2"	"24.38998"	"193.7"	"100.000"	"66.0172"	"21357"	"21357"	"21337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"245.6"	""	"243.1"	""	"245.4"	""	"345.3"	""	"385.0"	"377.2"	""	"1066"	"47"	"37.000"	"30.000"	"0.00102737077873077"	"15"	"0"	"9.202E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIAELGIYPAVDPLDSTSR"	"[R].aIAELGIYPAVDPLDSTSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.73743"	"2217.19773"	"2217.19643"	"0.59"	"0.00043"	"16/172"	"16"	"172"	"772619.577758789"	"HCD"	"MS2"	"14.28379"	"14.4"	"100.000"	"73.6691"	"24473"	"24473"	"24449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.3"	""	"16.8"	""	"19.5"	""	"20.6"	""	"35.4"	"27.3"	""	"1329"	"47"	"38.000"	"31.000"	"0.00148763019657866"	"15"	"0"	"2.113E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIAELGIYPAVDPLDSTSR"	"[R].aIAELGIYPAVDPLDSTSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.9811"	"0.0000"	"1"	"1"	"1"	"739.73761"	"2217.19828"	"2217.19643"	"0.83"	"0.00062"	"14/172"	"14"	"172"	"786095.857666016"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"73.6552"	"24519"	"24519"	"24495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.7"	""	"14.1"	""	"25.7"	""	"23.1"	""	"24.5"	"27.0"	""	"1331"	"53"	"38.000"	"31.000"	"0.00033354010397895"	"17"	"0"	"7.352E-06"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDTLLYSVLPPSVANELR"	"[K].tDTLLYSVLPPSVANELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"739.74988"	"2217.23508"	"2217.23281"	"1.02"	"0.00076"	"11/172"	"11"	"172"	"169823.385131836"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"84.4745"	"28870"	"28870"	"28844"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.4"	""	"5.3"	""	"5.3"	""	"7.4"	""	"10.8"	"6.7"	""	"1174"	"33"	"37.000"	"30.000"	"0.0325565293506294"	"18"	"0"	"0.0001252"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASQLQDSLKDLK"	"[R].aLASQLQDSLkDLk.[T]"	"N-Term(TMT6plex); K11(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"1"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"739.78589"	"2217.34311"	"2217.34214"	"0.44"	"0.00032"	"5/138"	"5"	"138"	"1007400.94592285"	"HCD"	"MS2"	"47.62129"	"85.3"	"100.000"	"59.1916"	"18623"	"18623"	"18597"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"134.6"	""	"100.0"	""	"92.6"	""	"141.2"	"0.9"	"178.6"	"161.8"	""	"365"	"16"	"32.000"	"25.000"	"0.461596884351421"	"15"	"0.0001308"	"0.0002402"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASIPFSVVGSNQLIEAK"	"[K].aSIPFSVVGSNQLIEAk.[G]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9322"	"0.0000"	"1"	"1"	"1"	"740.09955"	"2218.28409"	"2218.28474"	"-0.29"	"-0.00022"	"20/166"	"20"	"166"	"3309738.37969971"	"HCD"	"MS2"	"23.86929"	"83.4"	"100.000"	"67.9162"	"22176"	"22176"	"22154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.8"	""	"109.0"	""	"118.9"	""	"143.4"	"2.4"	"142.2"	"139.1"	""	"739"	"59"	"35.000"	"28.000"	"4.89344197254428E-05"	"20"	"0"	"8.863E-07"	"1.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASIPFSVVGSNQLIEAK"	"[K].aSIPFSVVGSNQLIEAk.[G]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"740.10034"	"2218.28647"	"2218.28474"	"0.78"	"0.00058"	"19/166"	"19"	"166"	"3067408.6192627"	"HCD"	"MS2"	"10.42968"	"86.3"	"100.000"	"68.0743"	"22189"	"22189"	"22170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.9"	""	"115.8"	""	"124.5"	""	"141.9"	"0.4"	"161.1"	"148.9"	""	"728"	"64"	"35.000"	"28.000"	"1.35550581076663E-05"	"20"	"0"	"5.264E-06"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNSLYPEGSKPVK"	"[K].lVNSLYPEGSkPVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.33862"	"2218.33266"	"2218.34142"	"-3.95"	"-0.00219"	"12/138"	"12"	"138"	"18828139.052124"	"HCD"	"MS2"	"0"	"283.5"	"52.199"	"43.8000"	"12317"	"12317"	"12303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"514.7"	""	"385.0"	""	"428.5"	""	"385.1"	""	"540.1"	"431.7"	""	"448"	"13"	"33.000"	"26.000"	"1.20572431283649"	"13"	"0.0001308"	"0.0002805"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNSLYPEGSKPVK"	"[K].lVNSLYPEGSkPVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.33911"	"2218.33462"	"2218.34142"	"-3.07"	"-0.00170"	"6/138"	"6"	"138"	"15552222.0570068"	"HCD"	"MS2"	"9.384005"	"430.9"	"100.000"	"44.0361"	"12462"	"12462"	"12447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"719.4"	""	"620.7"	""	"678.4"	""	"615.6"	"4.0"	"793.1"	"644.6"	""	"429"	"12"	"33.000"	"26.000"	"1.44021488952617"	"13"	"0.0001308"	"0.0002388"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNSLYPEGSKPVK"	"[K].lVNSLYPEGSkPVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.11694"	"2218.33628"	"2218.34142"	"-2.32"	"-0.00171"	"19/138"	"19"	"138"	"4674135.784729"	"HCD"	"MS2"	"0"	"285.0"	"100.000"	"43.6281"	"12247"	"12247"	"12221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"524.5"	""	"420.0"	""	"439.7"	""	"399.0"	"1.2"	"509.2"	"399.5"	""	"417"	"28"	"33.000"	"26.000"	"0.0328931949732314"	"14"	"0"	"1.067E-06"	"1.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNSLYPEGSKPVK"	"[K].lVNSLYPEGSkPVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"740.11774"	"2218.33866"	"2218.34142"	"-1.24"	"-0.00092"	"19/138"	"19"	"138"	"9424904.39019775"	"HCD"	"MS2"	"0"	"584.5"	"100.000"	"43.9903"	"12444"	"12444"	"12416"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1068.4"	""	"880.0"	""	"856.6"	""	"805.8"	""	"1072.9"	"848.8"	""	"410"	"15"	"33.000"	"26.000"	"0.720698903083012"	"17"	"0"	"6.175E-06"	"1.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEmR.[I]"	"N-Term(TMT6plex); M16(Oxidation)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1110.05396"	"2219.10063"	"2219.10042"	"0.10"	"0.00011"	"5/168"	"5"	"168"	"125154.882629395"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"67.9060"	"22121"	"22121"	"22090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"3.2"	""	"3.3"	""	"9.8"	""	"5.2"	"9.8"	""	"1025"	"18"	"37.000"	"30.000"	"0.735688334593749"	"14"	"0.0004557"	"0.002594"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEmR.[I]"	"N-Term(TMT6plex); M16(Oxidation)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1110.05457"	"2219.10185"	"2219.10042"	"0.65"	"0.00072"	"5/168"	"5"	"168"	"157144.068115234"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"67.7344"	"22102"	"22102"	"22074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.7"	""	"4.8"	""	"11.4"	""	"6.3"	""	"13.6"	"12.1"	""	"1019"	"22"	"37.000"	"30.000"	"0.298637394819898"	"14"	"0.0003839"	"0.001944"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEmR.[I]"	"N-Term(TMT6plex); M16(Oxidation)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.37256"	"2219.10312"	"2219.10042"	"1.22"	"0.00090"	"16/168"	"16"	"168"	"2139560.79168701"	"HCD"	"MS2"	"70.76143"	"31.6"	"100.000"	"67.7460"	"22056"	"22056"	"22029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.2"	""	"37.2"	""	"39.0"	""	"62.5"	""	"60.9"	"59.9"	""	"1026"	"51"	"37.000"	"30.000"	"0.000437640358491023"	"16"	"0"	"2.223E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFVQPTVFSNVTDEMR"	"[K].gFFVQPTVFSNVTDEmR.[I]"	"N-Term(TMT6plex); M16(Oxidation)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.37421"	"2219.10807"	"2219.10042"	"3.45"	"0.00255"	"18/168"	"18"	"168"	"2511064.46081543"	"HCD"	"MS2"	"9.733411"	"30.6"	"100.000"	"67.6538"	"22069"	"22069"	"22042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.3"	""	"32.7"	""	"44.6"	""	"64.0"	"0.3"	"54.6"	"53.6"	""	"1057"	"57"	"37.000"	"30.000"	"0.00011067384329172"	"16"	"0"	"9.833E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNSLYPEGSKPVK"	"[K].lVnSLYPEGSkPVk.[V]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.44482"	"2219.31992"	"2219.32543"	"-2.48"	"-0.00184"	"8/138"	"8"	"138"	"1397520.22955322"	"HCD"	"MS2"	"0"	"102.7"	"100.000"	"45.5769"	"13091"	"13091"	"13067"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.6"	""	"135.8"	""	"142.7"	""	"147.7"	""	"196.8"	"185.5"	""	"533"	"9"	"34.000"	"27.000"	"3.11671587706795"	"13"	"0.0001859"	"0.0003681"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYIGSFWSQPLLVPDNR"	"[R].vYIGSFWSQPLLVPDNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.73682"	"2220.19590"	"2220.20145"	"-2.50"	"-0.00185"	"9/164"	"9"	"164"	"357796.085388184"	"HCD"	"MS2"	"17.96353"	"8.9"	"100.000"	"83.7143"	"28560"	"28560"	"28538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.6"	""	"11.2"	""	"10.4"	""	"20.7"	""	"14.4"	"16.3"	""	"1353"	"22"	"38.000"	"31.000"	"0.446959117577139"	"14"	"0"	"0.0001724"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYIGSFWSQPLLVPDNR"	"[R].vYIGSFWSQPLLVPDNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"1110.60266"	"2220.19805"	"2220.20145"	"-1.54"	"-0.00170"	"4/164"	"4"	"164"	"90183.4384155273"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"83.8679"	"28674"	"28674"	"28647"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.5"	""	"3.4"	""	"5.1"	""	"6.8"	""	"8.9"	"8.0"	""	"1361"	"17"	"38.000"	"31.000"	"1.29368376948781"	"15"	"0.0006037"	"0.004081"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYIGSFWSQPLLVPDNR"	"[R].vYIGSFWSQPLLVPDNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"1110.60278"	"2220.19829"	"2220.20145"	"-1.43"	"-0.00158"	"5/164"	"5"	"164"	"109982.901489258"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"83.8593"	"28619"	"28619"	"28596"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"4.6"	""	"6.9"	""	"4.4"	""	"9.1"	"6.5"	""	"1359"	"20"	"38.000"	"31.000"	"0.629780864986269"	"16"	"0.0004166"	"0.002128"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYIGSFWSQPLLVPDNR"	"[R].vYIGSFWSQPLLVPDNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.73798"	"2220.19937"	"2220.20145"	"-0.94"	"-0.00069"	"12/164"	"12"	"164"	"655779.369018555"	"HCD"	"MS2"	"3.701243"	"10.9"	"100.000"	"84.1490"	"28788"	"28788"	"28769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.1"	""	"14.3"	""	"19.2"	""	"24.4"	""	"14.9"	"18.5"	""	"1370"	"46"	"38.000"	"31.000"	"0.00159474251150053"	"16"	"0"	"6.885E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYIGSFWSQPLLVPDNR"	"[R].vYIGSFWSQPLLVPDNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9818"	"0.0000"	"1"	"1"	"1"	"740.73834"	"2220.20047"	"2220.20145"	"-0.44"	"-0.00033"	"17/164"	"17"	"164"	"1205392.63439941"	"HCD"	"MS2"	"3.256119"	"9.7"	"100.000"	"83.8174"	"28653"	"28653"	"28631"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.7"	""	"13.6"	""	"12.0"	""	"19.1"	""	"17.8"	"17.2"	""	"1363"	"55"	"38.000"	"31.000"	"0.000213042308869497"	"17"	"0"	"2.193E-06"	"1.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYIGSFWSQPLLVPDNR"	"[R].vYIGSFWSQPLLVPDNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.73895"	"2220.20230"	"2220.20145"	"0.38"	"0.00028"	"17/164"	"17"	"164"	"1739669.32141113"	"HCD"	"MS2"	"1.616163"	"15.4"	"100.000"	"84.0043"	"28678"	"28678"	"28660"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.0"	""	"19.1"	""	"20.6"	""	"27.0"	""	"32.4"	"27.9"	""	"1350"	"44"	"38.000"	"31.000"	"0.003015114247019"	"15"	"0"	"5.764E-06"	"1.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAEETAATISAIEAMK"	"[R].lLAEETAATISAIEAMk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.75677"	"2220.25577"	"2220.25614"	"-0.17"	"-0.00012"	"13/148"	"13"	"148"	"131224.783752441"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"98.0149"	"33615"	"33615"	"33611"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.5"	""	"6.6"	""	"6.3"	""	"3.9"	""	"4.3"	"7.4"	""	"1051"	"37"	"37.000"	"30.000"	"0.0108785927878969"	"15"	"0"	"1.204E-05"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAEETAATISAIEAMK"	"[R].lLAEETAATISAIEAMk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.75702"	"2220.25650"	"2220.25614"	"0.16"	"0.00012"	"13/148"	"13"	"148"	"165056.482910156"	"HCD"	"MS2"	"40.32523"	"4.8"	"100.000"	"98.2654"	"33687"	"33687"	"33685"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"8.3"	""	"5.1"	""	"6.6"	""	"7.4"	"7.8"	""	"1058"	"33"	"37.000"	"30.000"	"0.0286059036838212"	"15"	"0"	"0.0001634"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTESVQNHIGSLNWGYR"	"[K].mTESVQNHIGSLNWGYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.03967"	"2221.10447"	"2221.10215"	"1.04"	"0.00077"	"7/168"	"7"	"168"	"1137072.05822754"	"HCD"	"MS2"	"0"	"52.2"	"100.000"	"47.1459"	"13728"	"13728"	"13698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.7"	""	"76.8"	""	"72.0"	""	"82.0"	""	"99.0"	"93.6"	""	"1091"	"21"	"37.000"	"30.000"	"0.410010288686931"	"14"	"0"	"0.0001338"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTESVQNHIGSLNWGYR"	"[K].mTESVQNHIGSLNWGYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.04022"	"2221.10611"	"2221.10215"	"1.78"	"0.00132"	"14/168"	"14"	"168"	"1065721.99285889"	"HCD"	"MS2"	"11.12391"	"51.4"	"100.000"	"46.8453"	"13557"	"13557"	"13528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.2"	""	"74.9"	""	"75.6"	""	"80.3"	"1.2"	"93.7"	"89.0"	""	"1081"	"23"	"37.000"	"30.000"	"0.281057836126365"	"14"	"0"	"9.133E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.8421"	"0.0000"	"1"	"1"	"1"	"556.07660"	"2221.28457"	"2221.28843"	"-1.74"	"-0.00097"	"8/136"	"8"	"136"	"1012015.51672363"	"HCD"	"MS2"	"28.00215"	"25.5"	"100.000"	"75.6550"	"25335"	"25335"	"25311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.2"	""	"36.2"	""	"38.7"	""	"46.6"	""	"41.4"	"39.8"	""	"791"	"19"	"35.000"	"28.000"	"0.518975060062095"	"17"	"0.000494"	"0.002684"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"1111.14648"	"2221.28569"	"2221.28843"	"-1.23"	"-0.00137"	"9/136"	"9"	"136"	"183179.911254883"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"75.5811"	"25305"	"25305"	"25279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.6"	""	"14.6"	""	"14.3"	""	"7.5"	""	"10.0"	"11.9"	""	"777"	"33"	"35.000"	"28.000"	"0.018466773527878"	"18"	"0.0001889"	"0.00072"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"1111.14661"	"2221.28594"	"2221.28843"	"-1.12"	"-0.00125"	"11/136"	"11"	"136"	"363844.481750488"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"75.2767"	"25181"	"25181"	"25151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.5"	""	"26.5"	""	"15.3"	""	"15.3"	""	"13.9"	"11.3"	""	"768"	"37"	"35.000"	"28.000"	"0.00794934277935759"	"17"	"0.0001889"	"0.0005596"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.7317"	"0.0000"	"1"	"1"	"1"	"556.07709"	"2221.28652"	"2221.28843"	"-0.86"	"-0.00048"	"12/136"	"12"	"136"	"3883333.50341797"	"HCD"	"MS2"	"19.23294"	"59.0"	"100.000"	"75.3068"	"25193"	"25193"	"25167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.6"	""	"120.9"	""	"77.5"	""	"81.2"	"2.1"	"84.3"	"70.6"	""	"772"	"41"	"35.000"	"28.000"	"0.00279632280588946"	"26"	"0"	"7.187E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"741.10059"	"2221.28720"	"2221.28843"	"-0.55"	"-0.00041"	"15/136"	"15"	"136"	"2852503.63006592"	"HCD"	"MS2"	"10.80444"	"64.1"	"100.000"	"75.1982"	"25149"	"25149"	"25119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"137.9"	""	"128.4"	""	"86.2"	""	"84.2"	"0.6"	"85.5"	"80.9"	""	"768"	"40"	"35.000"	"28.000"	"0.00355084098792277"	"19"	"0"	"9.422E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.7353"	"0.0000"	"1"	"1"	"1"	"556.07727"	"2221.28725"	"2221.28843"	"-0.53"	"-0.00029"	"11/136"	"11"	"136"	"3243547.33380127"	"HCD"	"MS2"	"26.8281"	"52.7"	"100.000"	"75.3119"	"25143"	"25143"	"25121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.4"	""	"102.2"	""	"71.0"	""	"90.1"	""	"83.1"	"58.7"	""	"768"	"34"	"35.000"	"28.000"	"0.0153932819568884"	"24"	"0"	"0.0001232"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"741.10071"	"2221.28757"	"2221.28843"	"-0.39"	"-0.00029"	"15/136"	"15"	"136"	"15513665.7885742"	"HCD"	"MS2"	"4.618771"	"144.0"	"51.209"	"75.4798"	"25264"	"25264"	"25247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.0"	""	"294.2"	""	"188.7"	""	"203.0"	"0.6"	"189.4"	"170.0"	""	"770"	"49"	"35.000"	"28.000"	"0.000513405751382879"	"18"	"0"	"1.829E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"1111.14758"	"2221.28789"	"2221.28843"	"-0.24"	"-0.00027"	"11/136"	"11"	"136"	"474095.802368164"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"75.3257"	"25149"	"25149"	"25121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.2"	""	"37.2"	""	"21.8"	""	"21.4"	""	"22.7"	"17.6"	""	"777"	"37"	"35.000"	"28.000"	"0.00700472392323943"	"17"	"7.476E-05"	"0.0001881"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"741.10083"	"2221.28794"	"2221.28843"	"-0.22"	"-0.00016"	"15/136"	"15"	"136"	"3170223.63763428"	"HCD"	"MS2"	"19.5969"	"70.1"	"100.000"	"75.2263"	"25108"	"25108"	"25089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.2"	""	"157.1"	""	"84.2"	""	"96.1"	""	"92.5"	"77.4"	""	"777"	"58"	"35.000"	"28.000"	"6.07282859166011E-05"	"21"	"0"	"9.004E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1111.14771"	"2221.28813"	"2221.28843"	"-0.13"	"-0.00015"	"5/136"	"5"	"136"	"173057.728088379"	"HCD"	"MS2"	"9.271186"	"7.2"	"100.000"	"75.6418"	"25278"	"25278"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.2"	""	"12.9"	""	"11.6"	""	"8.8"	""	"10.9"	"8.6"	""	"775"	"16"	"35.000"	"28.000"	"1.01688468556147"	"13"	"0.0004166"	"0.002176"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.8621"	"0.0000"	"1"	"1"	"1"	"556.07758"	"2221.28847"	"2221.28843"	"0.02"	"0.00001"	"11/136"	"11"	"136"	"1599224.99859619"	"HCD"	"MS2"	"29.71173"	"34.8"	"100.000"	"75.6350"	"25275"	"25275"	"25249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.9"	""	"50.0"	""	"56.2"	""	"60.4"	""	"59.4"	"53.0"	""	"772"	"29"	"35.000"	"28.000"	"0.046300673101566"	"19"	"0"	"0.0001777"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVVLVPSELYAGVPEK"	"[R].yVVLVPSELYAGVPEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"741.10132"	"2221.28940"	"2221.28843"	"0.44"	"0.00032"	"15/136"	"15"	"136"	"9540855.37481689"	"HCD"	"MS2"	"64.93474"	"152.8"	"82.471"	"75.5400"	"25236"	"25236"	"25217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"321.7"	""	"309.2"	""	"194.2"	""	"213.3"	"1.3"	"215.7"	"185.1"	""	"769"	"50"	"35.000"	"28.000"	"0.000374883515702335"	"19"	"0"	"1.836E-05"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVESLQEEIAFLK"	"[R].kVESLQEEIAFLk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"1"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"741.11786"	"2221.33902"	"2221.34108"	"-0.93"	"-0.00069"	"10/130"	"10"	"130"	"7201726.27545166"	"HCD"	"MS2"	"26.8784"	"218.3"	"100.000"	"62.5983"	"20014"	"20014"	"19987"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"317.8"	""	"297.1"	""	"243.3"	""	"325.6"	"2.0"	"451.8"	"434.3"	""	"406"	"38"	"33.000"	"26.000"	"0.00351152720920666"	"22"	"0"	"4.013E-06"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVESLQEEIAFLK"	"[R].kVESLQEEIAFLk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.09094"	"2221.34194"	"2221.34108"	"0.39"	"0.00021"	"7/130"	"7"	"130"	"3688630.79693604"	"HCD"	"MS2"	"13.28093"	"80.5"	"100.000"	"62.5768"	"19952"	"19952"	"19929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.4"	""	"104.6"	""	"94.1"	""	"115.1"	""	"167.4"	"182.0"	""	"389"	"21"	"32.000"	"25.000"	"0.158095535393917"	"14"	"0"	"0.0001217"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVESLQEEIAFLK"	"[R].kVESLQEEIAFLk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"1"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"741.11951"	"2221.34397"	"2221.34108"	"1.30"	"0.00096"	"15/130"	"15"	"130"	"5779666.76776123"	"HCD"	"MS2"	"12.69026"	"192.2"	"100.000"	"62.4918"	"19917"	"19917"	"19897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.1"	""	"268.2"	""	"221.3"	""	"284.9"	""	"394.5"	"391.6"	""	"381"	"17"	"32.000"	"25.000"	"0.378351081756579"	"16"	"0"	"9.171E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGIDKDAIVQAVK"	"[K].mFGIDkDAIVQAVk.[G]"	"N-Term(TMT6plex); K6(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.44360"	"2222.31626"	"2222.31857"	"-1.04"	"-0.00077"	"15/124"	"15"	"124"	"4809996.37310791"	"HCD"	"MS2"	"10.18432"	"315.1"	"100.000"	"65.1702"	"21064"	"21064"	"21043"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"516.1"	""	"424.0"	""	"499.8"	""	"335.7"	""	"575.2"	"637.9"	""	"516"	"6"	"34.000"	"27.000"	"6.39174890869388"	"13"	"0"	"0.0001728"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGIDKDAIVQAVK"	"[K].mFGIDkDAIVQAVk.[G]"	"N-Term(TMT6plex); K6(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.44452"	"2222.31900"	"2222.31857"	"0.19"	"0.00014"	"9/124"	"9"	"124"	"4654706.08703613"	"HCD"	"MS2"	"18.77629"	"298.1"	"100.000"	"65.1967"	"21022"	"21022"	"21001"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"497.6"	""	"412.3"	""	"476.8"	""	"338.8"	""	"537.7"	"563.1"	""	"496"	"9"	"33.000"	"26.000"	"3.46299353541873"	"13"	"0"	"4.998E-05"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNAIVYMIDAADREK"	"[R].gVNAIVYMIDAADREk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"1"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"741.74377"	"2223.21677"	"2223.22076"	"-1.79"	"-0.00133"	"19/156"	"19"	"156"	"1268551.93585205"	"HCD"	"MS2"	"16.88053"	"63.9"	"100.000"	"71.0683"	"23463"	"23463"	"23434"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.1"	""	"98.3"	""	"92.2"	""	"76.3"	"4.6"	"80.1"	"89.4"	""	"1232"	"48"	"37.000"	"30.000"	"0.00109290072022834"	"21"	"0"	"8.121E-07"	"1.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNAIVYMIDAADREK"	"[R].gVNAIVYMIDAADREk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.74408"	"2223.21769"	"2223.22076"	"-1.38"	"-0.00102"	"17/156"	"17"	"156"	"1304633.66790771"	"HCD"	"MS2"	"14.41222"	"68.9"	"100.000"	"71.1714"	"23453"	"23453"	"23427"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.3"	""	"99.7"	""	"108.3"	""	"79.2"	"3.2"	"93.8"	"96.2"	""	"1221"	"59"	"37.000"	"30.000"	"8.33078004887538E-05"	"16"	"0"	"6.537E-07"	"1.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSFSLSAEPIQGPYK"	"[K].qLSFSLSAEPIQGPYk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.75134"	"2223.23948"	"2223.24254"	"-1.38"	"-0.00102"	"15/162"	"15"	"162"	"4324071.50817871"	"HCD"	"MS2"	"16.14369"	"117.4"	"100.000"	"64.7574"	"20896"	"20896"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.7"	""	"195.5"	""	"178.1"	""	"216.4"	"0.8"	"161.8"	"171.0"	""	"1090"	"66"	"37.000"	"30.000"	"1.48729289163038E-05"	"17"	"0"	"4.772E-06"	"1.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSFSLSAEPIQGPYK"	"[K].qLSFSLSAEPIQGPYk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9825"	"0.0000"	"1"	"1"	"1"	"741.75323"	"2223.24515"	"2223.24254"	"1.17"	"0.00087"	"14/162"	"14"	"162"	"4261092.17822266"	"HCD"	"MS2"	"11.19676"	"124.4"	"100.000"	"64.8119"	"20865"	"20865"	"20841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.0"	""	"206.6"	""	"180.6"	""	"239.6"	""	"161.8"	"190.4"	""	"1055"	"57"	"37.000"	"30.000"	"9.48904407730435E-05"	"17"	"0"	"9.358E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEEKFITILGTR"	"[K].wGTDEEkFITILGTR.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"742.08557"	"2224.24216"	"2224.23779"	"1.97"	"0.00146"	"10/150"	"10"	"150"	"922001.81628418"	"HCD"	"MS2"	"6.533496"	"56.0"	"100.000"	"70.0304"	"23039"	"23039"	"23018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"128.0"	""	"77.5"	""	"59.3"	""	"92.2"	"0.5"	"88.7"	"83.0"	""	"1022"	"5"	"37.000"	"30.000"	"18.0061515102711"	"13"	"0.0009404"	"0.009703"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEEKFITILGTR"	"[K].wGTDEEkFITILGTR.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"742.08563"	"2224.24234"	"2224.23779"	"2.05"	"0.00152"	"10/150"	"10"	"150"	"1108724.32904053"	"HCD"	"MS2"	"0"	"66.0"	"100.000"	"70.0963"	"23014"	"23014"	"22995"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.4"	""	"82.5"	""	"77.3"	""	"110.2"	"0.6"	"109.4"	"101.3"	""	"1022"	"1"	"37.000"	"30.000"	"39.6662276597261"	"13"	"0.0001889"	"0.000558"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLDFPNLPYLMDGK"	"[K].lDLDFPNLPYLmDGk.[N]"	"N-Term(TMT6plex); M12(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"742.40369"	"2225.19651"	"2225.19281"	"1.66"	"0.00123"	"13/150"	"13"	"150"	"290462.743286133"	"HCD"	"MS2"	"26.23236"	"10.2"	"100.000"	"84.6751"	"28952"	"28952"	"28923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.9"	""	"6.0"	""	"16.1"	""	"19.7"	""	"22.8"	"24.8"	""	"1280"	"42"	"38.000"	"31.000"	"0.00432693104250868"	"18"	"0.0001308"	"0.0002486"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLDFPNLPYLMDGK"	"[K].lDLDFPNLPYLmDGk.[N]"	"N-Term(TMT6plex); M12(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"Q9Z1B2"	"Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"742.40662"	"2225.20530"	"2225.19281"	"5.61"	"0.00416"	"12/150"	"12"	"150"	"311781.879638672"	"HCD"	"MS2"	"25.9317"	"11.1"	"100.000"	"84.7599"	"29037"	"29037"	"29010"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.7"	""	"9.1"	""	"15.8"	""	"25.1"	""	"22.6"	"23.8"	""	"1255"	"26"	"37.000"	"30.000"	"0.155100690099762"	"18"	"0.000523"	"0.00312"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAEENGLLFLEASAK"	"[K].qFAEENGLLFLEASAk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"742.41077"	"2225.21775"	"2225.22180"	"-1.82"	"-0.00135"	"14/170"	"14"	"170"	"863115.013366699"	"HCD"	"MS2"	"12.63295"	"36.5"	"100.000"	"74.3289"	"24742"	"24742"	"24721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.8"	""	"52.7"	""	"36.3"	""	"58.6"	"0.9"	"68.6"	"80.3"	""	"1177"	"15"	"37.000"	"30.000"	"1.74480327273508"	"15"	"0.0001889"	"0.0007709"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPYYTEPVIAGLDPK"	"[R].fGPYYTEPVIAGLDPk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"742.41241"	"2225.22269"	"2225.22583"	"-1.41"	"-0.00105"	"13/136"	"13"	"136"	"4255723.02545166"	"HCD"	"MS2"	"0"	"91.3"	"100.000"	"72.4286"	"24018"	"24018"	"23999"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.7"	""	"110.2"	""	"130.8"	""	"139.4"	""	"176.3"	"184.8"	""	"1136"	"24"	"37.000"	"30.000"	"0.230859810965841"	"15"	"0"	"9.438E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPYYTEPVIAGLDPK"	"[R].fGPYYTEPVIAGLDPk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"742.41260"	"2225.22324"	"2225.22583"	"-1.16"	"-0.00086"	"15/136"	"15"	"136"	"5421092.04052734"	"HCD"	"MS2"	"1.285143"	"115.1"	"100.000"	"72.1152"	"23890"	"23890"	"23871"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.2"	""	"165.5"	""	"162.5"	""	"172.9"	""	"199.5"	"205.5"	""	"1123"	"44"	"37.000"	"30.000"	"0.00231926172367475"	"17"	"0"	"7.546E-06"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPYYTEPVIAGLDPK"	"[R].fGPYYTEPVIAGLDPk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"1113.11548"	"2225.22368"	"2225.22583"	"-0.96"	"-0.00107"	"11/136"	"11"	"136"	"286322.457824707"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"72.2145"	"23931"	"23931"	"23903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.9"	""	"23.7"	""	"32.6"	""	"31.6"	""	"31.8"	"32.4"	""	"1117"	"35"	"37.000"	"30.000"	"0.0181979797509622"	"18"	"0.000523"	"0.003209"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPYYTEPVIAGLDPK"	"[R].fGPYYTEPVIAGLDPk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"742.41284"	"2225.22397"	"2225.22583"	"-0.83"	"-0.00062"	"9/136"	"9"	"136"	"4561135.9576416"	"HCD"	"MS2"	"0"	"106.3"	"100.000"	"72.1651"	"23859"	"23859"	"23841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.6"	""	"144.2"	""	"147.6"	""	"171.2"	""	"190.1"	"192.3"	""	"1117"	"47"	"37.000"	"30.000"	"0.0010447759753943"	"20"	"0"	"2.517E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPYYTEPVIAGLDPK"	"[R].fGPYYTEPVIAGLDPk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"1113.11609"	"2225.22490"	"2225.22583"	"-0.42"	"-0.00046"	"12/136"	"12"	"136"	"421524.575317383"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"72.2690"	"23902"	"23902"	"23873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.4"	""	"36.6"	""	"42.7"	""	"42.5"	""	"49.0"	"51.0"	""	"1111"	"39"	"37.000"	"30.000"	"0.00646672009337527"	"21"	"0.0001308"	"0.0002373"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPYYTEPVIAGLDPK"	"[R].fGPYYTEPVIAGLDPk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"P40112"	"Proteasome subunit beta type-3 OS=Rattus norvegicus OX=10116 GN=Psmb3 PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"742.41418"	"2225.22800"	"2225.22583"	"0.98"	"0.00072"	"13/136"	"13"	"136"	"4126626.78637695"	"HCD"	"MS2"	"0"	"88.2"	"100.000"	"72.4787"	"23987"	"23987"	"23969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.9"	""	"119.5"	""	"110.9"	""	"139.2"	""	"164.4"	"168.2"	""	"1104"	"26"	"37.000"	"30.000"	"0.1330267796635"	"15"	"0"	"6.054E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATENDIYNFFSPLNPVR"	"[KR].aTENDIYNFFSPLNPVR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q794E4; Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1113.57104"	"2226.13481"	"2226.13925"	"-1.99"	"-0.00222"	"14/172"	"14"	"172"	"180775.188171387"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"79.4692"	"26829"	"26829"	"26801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.8"	""	"12.7"	""	"15.0"	""	"18.8"	""	"17.8"	"22.4"	""	"1238"	"48"	"37.000"	"30.000"	"0.00106583664791634"	"16"	"0"	"0.0001159"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATENDIYNFFSPLNPVR"	"[KR].aTENDIYNFFSPLNPVR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q794E4; Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"1113.57263"	"2226.13799"	"2226.13925"	"-0.57"	"-0.00063"	"6/172"	"6"	"172"	"118405.86151123"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"79.7783"	"26955"	"26955"	"26929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"8.4"	""	"9.0"	""	"11.1"	""	"12.8"	"10.4"	""	"1274"	"25"	"38.000"	"31.000"	"0.222915071397063"	"21"	"0.0001889"	"0.0003889"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATENDIYNFFSPLNPVR"	"[KR].aTENDIYNFFSPLNPVR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q794E4; Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"3"	"3"	"0.9844"	"0.0000"	"1"	"1"	"1"	"742.71765"	"2226.13840"	"2226.13925"	"-0.38"	"-0.00028"	"17/172"	"17"	"172"	"1307147.82928467"	"HCD"	"MS2"	"0.9558084"	"17.3"	"100.000"	"79.7869"	"27009"	"27009"	"26991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.5"	""	"23.8"	""	"19.4"	""	"28.1"	"1.0"	"33.1"	"31.9"	""	"1285"	"64"	"38.000"	"31.000"	"2.70316858737005E-05"	"17"	"0"	"4.438E-06"	"1.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATENDIYNFFSPLNPVR"	"[KR].aTENDIYNFFSPLNPVR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q794E4; Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"0.9571"	"0.0000"	"1"	"1"	"1"	"1113.57300"	"2226.13872"	"2226.13925"	"-0.24"	"-0.00026"	"15/172"	"15"	"172"	"154833.412109375"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"79.4615"	"26877"	"26877"	"26847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.0"	""	"10.1"	""	"14.3"	""	"17.0"	""	"16.7"	"16.4"	""	"1290"	"70"	"38.000"	"31.000"	"7.23701903024766E-06"	"20"	"0"	"1.339E-05"	"1.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATENDIYNFFSPLNPVR"	"[KR].aTENDIYNFFSPLNPVR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q794E4; Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"3"	"3"	"0.9825"	"0.0000"	"1"	"1"	"1"	"742.71790"	"2226.13913"	"2226.13925"	"-0.05"	"-0.00004"	"19/172"	"19"	"172"	"4046996.97277832"	"HCD"	"MS2"	"2.813346"	"34.4"	"100.000"	"79.4730"	"26881"	"26881"	"26863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.0"	""	"53.3"	""	"45.5"	""	"53.5"	"1.4"	"63.5"	"64.0"	""	"1284"	"57"	"38.000"	"31.000"	"0.000126047729772874"	"17"	"0"	"1.301E-05"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATENDIYNFFSPLNPVR"	"[KR].aTENDIYNFFSPLNPVR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q794E4; Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"742.71808"	"2226.13968"	"2226.13925"	"0.20"	"0.00014"	"18/172"	"18"	"172"	"1215567.39489746"	"HCD"	"MS2"	"1.412037"	"20.1"	"100.000"	"79.8338"	"26978"	"26978"	"26961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.0"	""	"29.6"	""	"26.7"	""	"28.5"	""	"40.6"	"42.0"	""	"1293"	"52"	"38.000"	"31.000"	"0.000396797136339039"	"17"	"0"	"8.662E-06"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATENDIYNFFSPLNPVR"	"[KR].aTENDIYNFFSPLNPVR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q794E4; Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"3"	"3"	"0.9831"	"0.0000"	"1"	"1"	"1"	"742.71814"	"2226.13987"	"2226.13925"	"0.28"	"0.00021"	"19/172"	"19"	"172"	"4887901.55145264"	"HCD"	"MS2"	"1.161754"	"37.1"	"100.000"	"79.5201"	"26850"	"26850"	"26833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.5"	""	"49.2"	""	"44.6"	""	"62.0"	"1.2"	"66.3"	"77.0"	""	"1293"	"59"	"38.000"	"31.000"	"8.741149121051E-05"	"17"	"0"	"1.429E-05"	"1.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATENDIYNFFSPLNPVR"	"[KR].aTEnDIYNFFSPLNPVR.[V]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q794E4; Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.04572"	"2227.12259"	"2227.12326"	"-0.30"	"-0.00022"	"5/172"	"5"	"172"	"231480.670288086"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"80.7591"	"27355"	"27355"	"27328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"15.5"	""	"12.5"	""	"18.8"	""	"16.9"	"21.3"	""	"1216"	"4"	"37.000"	"30.000"	"26.7241302186197"	"13"	"0.0009727"	"0.01033"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVAVGDWGGVPNAPFHTAR"	"[R].fVAVGDWGGVPNAPFHTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P29288"	"Tartrate-resistant acid phosphatase type 5 OS=Rattus norvegicus OX=10116 GN=Acp5 PE=1 SV=1"	"P29288"	"Tartrate-resistant acid phosphatase type 5 OS=Rattus norvegicus OX=10116 GN=Acp5 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"743.05804"	"2227.15958"	"2227.16099"	"-0.63"	"-0.00047"	"13/180"	"13"	"180"	"909762.016601563"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"59.9125"	"18864"	"18864"	"18841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.9"	""	"58.9"	""	"58.0"	""	"74.1"	""	"77.3"	"82.4"	""	"1312"	"34"	"38.000"	"31.000"	"0.0278550433948782"	"17"	"0"	"6.231E-06"	"1.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVAVGDWGGVPNAPFHTAR"	"[R].fVAVGDWGGVPNAPFHTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P29288"	"Tartrate-resistant acid phosphatase type 5 OS=Rattus norvegicus OX=10116 GN=Acp5 PE=1 SV=1"	"P29288"	"Tartrate-resistant acid phosphatase type 5 OS=Rattus norvegicus OX=10116 GN=Acp5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.05811"	"2227.15976"	"2227.16099"	"-0.55"	"-0.00041"	"11/180"	"11"	"180"	"842185.039672852"	"HCD"	"MS2"	"59.88817"	"45.7"	"100.000"	"60.0872"	"18989"	"18989"	"18964"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.8"	""	"52.1"	""	"67.8"	""	"90.0"	""	"75.2"	"86.5"	""	"1313"	"23"	"38.000"	"31.000"	"0.298012671330859"	"14"	"0"	"4.446E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSKLDSGK"	"[R].yESLTDPSkLDSGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex); K14(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"1"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"743.08459"	"2227.23923"	"2227.24249"	"-1.46"	"-0.00109"	"10/134"	"10"	"134"	"1230036.16107178"	"HCD"	"MS2"	"0"	"101.3"	"100.000"	"41.5634"	"11415"	"11415"	"11387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"243.0"	""	"203.9"	""	"197.3"	""	"99.3"	""	"105.1"	"106.8"	""	"1075"	"6"	"37.000"	"30.000"	"12.1444672649378"	"17"	"0.0001889"	"0.0011"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSKLDSGK"	"[R].yESLTDPSkLDSGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex); K14(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.08557"	"2227.24216"	"2227.24249"	"-0.15"	"-0.00011"	"13/134"	"13"	"134"	"2527717.37634277"	"HCD"	"MS2"	"14.45789"	"169.4"	"100.000"	"41.7031"	"11516"	"11516"	"11490"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"549.0"	""	"351.8"	""	"346.9"	""	"104.3"	"0.6"	"110.3"	"120.3"	""	"1077"	"17"	"37.000"	"30.000"	"1.13811384795203"	"14"	"0"	"0.0001482"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALESPERPFLAILGGAK"	"[K].aLESPERPFLAILGGAk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"4"	"4"	"0.7931"	"0.0000"	"1"	"1"	"1"	"557.58490"	"2227.31777"	"2227.32146"	"-1.66"	"-0.00092"	"11/154"	"11"	"154"	"5570798.49664307"	"HCD"	"MS2"	"7.805823"	"108.5"	"100.000"	"66.2838"	"21519"	"21519"	"21491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.7"	""	"166.1"	""	"148.2"	""	"165.5"	""	"179.7"	"188.5"	""	"494"	"29"	"33.000"	"26.000"	"0.0303876386390658"	"20"	"0.0001308"	"0.0002424"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALESPERPFLAILGGAK"	"[K].aLESPERPFLAILGGAk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.11133"	"2227.31943"	"2227.32146"	"-0.91"	"-0.00068"	"17/154"	"17"	"154"	"4864726.93212891"	"HCD"	"MS2"	"12.80322"	"270.5"	"100.000"	"66.3676"	"21500"	"21500"	"21481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"467.8"	""	"372.7"	""	"364.9"	""	"435.6"	""	"459.5"	"465.6"	""	"476"	"27"	"33.000"	"26.000"	"0.0450377781237504"	"14"	"0"	"4.156E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALESPERPFLAILGGAK"	"[K].aLESPERPFLAILGGAk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"4"	"4"	"0.7500"	"0.0000"	"1"	"1"	"1"	"557.58539"	"2227.31972"	"2227.32146"	"-0.78"	"-0.00043"	"12/154"	"12"	"154"	"6689619.82861328"	"HCD"	"MS2"	"10.593"	"131.0"	"100.000"	"66.4489"	"21533"	"21533"	"21513"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"223.1"	""	"175.7"	""	"178.5"	""	"212.7"	""	"216.2"	"233.6"	""	"477"	"20"	"33.000"	"26.000"	"0.264538193440083"	"19"	"0"	"0.0001464"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALESPERPFLAILGGAK"	"[K].aLESPERPFLAILGGAk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.11151"	"2227.31998"	"2227.32146"	"-0.66"	"-0.00049"	"18/154"	"18"	"154"	"8386326.43371582"	"HCD"	"MS2"	"0"	"311.3"	"75.230"	"66.5768"	"21638"	"21638"	"21619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"505.6"	""	"424.9"	""	"439.9"	""	"493.8"	""	"514.6"	"570.0"	""	"477"	"22"	"33.000"	"26.000"	"0.165001686564166"	"14"	"0"	"6.901E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALESPERPFLAILGGAK"	"[K].aLESPERPFLAILGGAk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.11169"	"2227.32053"	"2227.32146"	"-0.42"	"-0.00031"	"14/154"	"14"	"154"	"7200387.43670654"	"HCD"	"MS2"	"8.354968"	"380.3"	"100.000"	"66.2658"	"21511"	"21511"	"21491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"662.9"	""	"545.7"	""	"528.5"	""	"578.1"	""	"632.5"	"652.2"	""	"464"	"28"	"33.000"	"26.000"	"0.0401317395337904"	"14"	"0"	"4.342E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALESPERPFLAILGGAK"	"[K].aLESPERPFLAILGGAk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.11212"	"2227.32181"	"2227.32146"	"0.16"	"0.00012"	"12/154"	"12"	"154"	"10256644.2736816"	"HCD"	"MS2"	"0"	"458.6"	"82.574"	"66.6746"	"21626"	"21626"	"21609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"744.2"	""	"634.8"	""	"657.1"	""	"720.6"	""	"771.9"	"817.7"	""	"466"	"25"	"33.000"	"26.000"	"0.077509675917503"	"14"	"0"	"2.413E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKALLQMVQQFGVDFEK"	"[K].TKALLQmVQqFGVDFEk.[R]"	"M7(Oxidation); Q10(Deamidated); K17(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"1"	"3"	"3"	"0.0870"	"0.0000"	"1"	"1"	"1"	"743.40845"	"2228.21079"	"2228.18342"	"12.28"	"0.00912"	"11/188"	"11"	"188"	"203138.249084473"	"HCD"	"MS2"	"20.09725"	"10.3"	"100.000"	"78.7162"	"26573"	"26573"	"26543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.2"	""	"13.6"	""	"12.7"	""	"21.2"	""	"20.3"	"18.9"	""	"1249"	"23"	"37.000"	"30.000"	"0.334605012617082"	"25"	"0.005916"	"0.1964"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLFKDDYPSSPPK"	"[R].mLFkDDYPSSPPk.[C]"	"N-Term(TMT6plex); M1(Oxidation); K4(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"1"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"743.41327"	"2228.22525"	"2228.22400"	"0.56"	"0.00042"	"4/124"	"4"	"124"	"713079.28729248"	"HCD"	"MS2"	"14.83478"	"59.0"	"100.000"	"40.6093"	"11068"	"11068"	"11037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.2"	""	"91.0"	""	"82.1"	""	"103.8"	""	"88.3"	"93.1"	""	"1176"	"9"	"37.000"	"30.000"	"7.11831702527683"	"16"	"0.006845"	"0.2563"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSIFNSGSHVLPLEQGK"	"[R].gSIFNSGSHVLPLEQGk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.6897"	"0.0000"	"1"	"1"	"1"	"557.81573"	"2228.24111"	"2228.24394"	"-1.27"	"-0.00071"	"14/176"	"14"	"176"	"6644596.89959717"	"HCD"	"MS2"	"18.42933"	"151.2"	"100.000"	"48.0869"	"14113"	"14113"	"14082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"256.6"	""	"210.9"	""	"192.5"	""	"247.0"	"0.5"	"247.5"	"275.3"	""	"1057"	"29"	"37.000"	"30.000"	"0.0732900455558794"	"14"	"0"	"5.476E-06"	"1.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSIFNSGSHVLPLEQGK"	"[R].gSIFNSGSHVLPLEQGk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.3514"	"0.0000"	"1"	"1"	"1"	"557.81659"	"2228.24453"	"2228.24394"	"0.26"	"0.00015"	"10/176"	"10"	"176"	"8244350.89013672"	"HCD"	"MS2"	"10.06235"	"165.9"	"100.000"	"47.7247"	"13916"	"13916"	"13896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"295.2"	""	"259.2"	""	"206.5"	""	"256.1"	"5.6"	"287.3"	"259.5"	""	"1033"	"37"	"37.000"	"30.000"	"0.00942042130248093"	"23"	"0"	"4.41E-06"	"1.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHQFFNVGLIQPGSVK"	"[K].vHQFFNVGLIQPGSVk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"557.82971"	"2228.29702"	"2228.29558"	"0.65"	"0.00036"	"7/146"	"7"	"146"	"8552146.96234131"	"HCD"	"MS2"	"12.0635"	"192.0"	"100.000"	"58.3454"	"18282"	"18282"	"18261"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"262.8"	""	"311.4"	""	"277.1"	""	"252.0"	""	"378.4"	"338.3"	""	"621"	"24"	"34.000"	"27.000"	"0.130335164529208"	"14"	"0"	"3.563E-06"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHQFFNVGLIQPGSVK"	"[K].vHQFFNVGLIQPGSVk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"743.43744"	"2228.29776"	"2228.29558"	"0.98"	"0.00073"	"10/146"	"10"	"146"	"13551875.8762207"	"HCD"	"MS2"	"4.46395"	"235.2"	"76.255"	"58.1349"	"18142"	"18142"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"334.4"	""	"401.6"	""	"329.7"	""	"423.5"	""	"385.7"	"351.4"	""	"618"	"49"	"34.000"	"27.000"	"0.000353149405450039"	"19"	"0"	"5.251E-06"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHQFFNVGLIQPGSVK"	"[K].vHQFFNVGLIQPGSVk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"743.43787"	"2228.29905"	"2228.29558"	"1.56"	"0.00116"	"16/146"	"16"	"146"	"14012221.6827393"	"HCD"	"MS2"	"13.08502"	"221.9"	"68.669"	"58.2601"	"18247"	"18247"	"18229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"294.2"	""	"378.2"	""	"295.9"	""	"420.0"	"1.7"	"384.9"	"324.4"	""	"598"	"45"	"34.000"	"27.000"	"0.000878357245936497"	"18"	"0"	"6.379E-06"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGEIPIVESEIKK"	"[R].sLGEIPIVESEIkk.[E]"	"N-Term(TMT6plex); K13(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"1"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"743.79272"	"2229.36362"	"2229.36730"	"-1.65"	"-0.00123"	"15/126"	"15"	"126"	"2701970.87249756"	"HCD"	"MS2"	"29.18134"	"165.0"	"100.000"	"57.2285"	"17826"	"17826"	"17797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"243.2"	""	"198.2"	""	"208.5"	""	"291.3"	""	"301.4"	"320.8"	""	"278"	"14"	"31.000"	"24.000"	"0.508176760342243"	"14"	"0"	"2.426E-05"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDAVSGDELMTLAHK"	"[K].vWDAVSGDELMTLAHk.[H]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.06989"	"2230.19510"	"2230.19421"	"0.40"	"0.00030"	"11/138"	"11"	"138"	"2373288.89379883"	"HCD"	"MS2"	"75.21948"	"88.2"	"100.000"	"68.3684"	"22361"	"22361"	"22330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.9"	""	"114.4"	""	"131.4"	""	"147.0"	""	"146.0"	"157.8"	""	"1295"	"26"	"38.000"	"31.000"	"0.178747416190267"	"14"	"0"	"2.078E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDAVSGDELMTLAHK"	"[K].vWDAVSGDELMTLAHk.[H]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"744.07007"	"2230.19565"	"2230.19421"	"0.65"	"0.00048"	"10/138"	"10"	"138"	"2966060.78692627"	"HCD"	"MS2"	"36.45868"	"119.1"	"100.000"	"68.5565"	"22386"	"22386"	"22362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.0"	""	"165.9"	""	"176.5"	""	"190.0"	""	"196.1"	"204.6"	""	"1296"	"12"	"38.000"	"31.000"	"4.23228598115562"	"15"	"0"	"4.675E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNEAVGALMYHTITLTR"	"[K].vLNEAVGALMYHTITLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2F5"	"C-terminal-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ctbp1 PE=1 SV=3"	"Q9Z2F5"	"C-terminal-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ctbp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.41913"	"2231.24283"	"2231.24194"	"0.40"	"0.00030"	"16/192"	"16"	"192"	"454697.278747559"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"79.0652"	"26664"	"26664"	"26641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.9"	""	"22.0"	""	"19.6"	""	"24.9"	""	"27.2"	"32.9"	""	"1128"	"41"	"37.000"	"30.000"	"0.00402049108991357"	"15"	"0"	"6.19E-06"	"1.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNEAVGALMYHTITLTR"	"[K].vLNEAVGALMYHTITLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2F5"	"C-terminal-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ctbp1 PE=1 SV=3"	"Q9Z2F5"	"C-terminal-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ctbp1 PE=1 SV=3"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"744.42004"	"2231.24558"	"2231.24194"	"1.63"	"0.00121"	"17/192"	"17"	"192"	"432915.558776855"	"HCD"	"MS2"	"18.76828"	"14.0"	"100.000"	"78.9377"	"26663"	"26663"	"26639"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.8"	""	"19.5"	""	"15.6"	""	"20.3"	""	"26.2"	"33.7"	""	"1128"	"62"	"37.000"	"30.000"	"3.88399895138172E-05"	"18"	"0"	"3.492E-07"	"1.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQIVFPAGILQPPFFSAR"	"[R].nQIVFPAGILQPPFFSAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"744.42139"	"2231.24961"	"2231.25382"	"-1.89"	"-0.00141"	"6/170"	"6"	"170"	"174221.235534668"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"88.2876"	"30436"	"30436"	"30431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	"4.2"	""	"3.7"	""	"8.2"	""	"7.8"	"10.7"	""	"1076"	"27"	"37.000"	"30.000"	"0.119614072117046"	"19"	"0.0001308"	"0.0002126"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQIVFPAGILQPPFFSAR"	"[R].nQIVFPAGILQPPFFSAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1116.12854"	"2231.24980"	"2231.25382"	"-1.80"	"-0.00201"	"5/170"	"5"	"170"	"61933.5217895508"	"HCD"	"MS2"	"0"	"0.9"	"100.000"	"88.3945"	"30477"	"30477"	"30463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.0"	""	""	""	""	""	"2.8"	""	"2.0"	"2.2"	""	"1076"	"10"	"37.000"	"30.000"	"5.18540014709697"	"13"	"0.00385"	"0.09744"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQIVFPAGILQPPFFSAR"	"[R].nQIVFPAGILQPPFFSAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"744.42188"	"2231.25107"	"2231.25382"	"-1.23"	"-0.00092"	"11/170"	"11"	"170"	"168666.096191406"	"HCD"	"MS2"	"7.549412"	"3.8"	"100.000"	"88.1663"	"30347"	"30347"	"30338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.0"	""	"2.2"	""	"5.9"	""	"10.1"	""	"8.1"	"7.5"	""	"1070"	"24"	"37.000"	"30.000"	"0.223539246155943"	"19"	"0"	"0.0001078"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NQIVFPAGILQPPFFSAR"	"[R].nQIVFPAGILQPPFFSAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"1116.12952"	"2231.25176"	"2231.25382"	"-0.93"	"-0.00103"	"3/170"	"3"	"170"	"49782.1145019531"	"HCD"	"MS2"	"0"	"0.8"	"100.000"	"88.2312"	"30372"	"30372"	"30359"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	"2.9"	""	"2.9"	"2.2"	""	"1082"	"4"	"37.000"	"30.000"	"22.8663720317691"	"13"	"0.003635"	"0.08498"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQIVFPAGILQPPFFSAR"	"[R].nQIVFPAGILQPPFFSAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"744.42212"	"2231.25180"	"2231.25382"	"-0.91"	"-0.00067"	"10/170"	"10"	"170"	"151698.14440918"	"HCD"	"MS2"	"9.959576"	"4.0"	"100.000"	"88.5593"	"30540"	"30540"	"30528"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.0"	""	"2.4"	""	"3.5"	""	"8.2"	""	"10.6"	"11.0"	""	"1078"	"30"	"37.000"	"30.000"	"0.050651086439434"	"18"	"0"	"4.725E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQIVFPAGILQPPFFSAR"	"[R].nQIVFPAGILQPPFFSAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"744.42255"	"2231.25309"	"2231.25382"	"-0.33"	"-0.00025"	"10/170"	"10"	"170"	"164511.414428711"	"HCD"	"MS2"	"4.048685"	"4.9"	"100.000"	"88.4565"	"30459"	"30459"	"30449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.8"	""	"5.3"	""	"5.4"	""	"10.8"	""	"12.0"	"10.1"	""	"1061"	"23"	"37.000"	"30.000"	"0.267107072961984"	"15"	"0.0001859"	"0.00035"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLRPSMIDELYLPK"	"[K].dSLRPSMIDELYLPk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"745.75262"	"2235.24332"	"2235.24591"	"-1.16"	"-0.00086"	"14/152"	"14"	"152"	"3797374.18786621"	"HCD"	"MS2"	"8.327383"	"161.0"	"100.000"	"61.6506"	"19627"	"19627"	"19603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"321.1"	""	"393.6"	""	"194.4"	""	"190.3"	""	"235.1"	"190.0"	""	"1103"	"11"	"37.000"	"30.000"	"4.24175437818065"	"15"	"0"	"4.504E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLRPSMIDELYLPK"	"[K].dSLRPSMIDELYLPk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.75348"	"2235.24588"	"2235.24591"	"-0.01"	"-0.00001"	"15/152"	"15"	"152"	"3266750.93786621"	"HCD"	"MS2"	"41.93506"	"145.0"	"100.000"	"61.4895"	"19508"	"19508"	"19481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"297.9"	""	"349.4"	""	"186.8"	""	"170.2"	""	"200.2"	"163.3"	""	"1078"	"15"	"37.000"	"30.000"	"1.74819053751299"	"13"	"0"	"1.653E-05"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLRPSMIDELYLPK"	"[K].dSLRPSMIDELYLPk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"3"	"745.75391"	"2235.24717"	"2235.24591"	"0.56"	"0.00042"	"11/152"	"11"	"152"	"865253.38092041"	"HCD"	"MS2"	"2.711692"	"59.4"	"100.000"	"61.8030"	"19636"	"19636"	"19609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"112.6"	""	"106.7"	""	"87.6"	""	"80.3"	""	"89.9"	"86.5"	""	"1074"	"5"	"37.000"	"30.000"	"18.3642960629862"	"14"	"0.0001889"	"0.000691"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPK.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1118.54041"	"2236.07353"	"2236.07935"	"-2.60"	"-0.00291"	"6/166"	"6"	"166"	"69921.984375"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"73.2353"	"24348"	"24348"	"24319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.2"	""	"2.4"	""	"3.0"	""	""	""	"5.0"	"4.3"	""	"854"	"9"	"36.000"	"29.000"	"5.59020681120747"	"13"	"0.004377"	"0.127"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1118.54102"	"2236.07475"	"2236.07935"	"-2.06"	"-0.00230"	"5/166"	"5"	"166"	"109032.485595703"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"70.2694"	"23085"	"23085"	"23059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"4.0"	""	"5.4"	""	"9.8"	""	"10.6"	"10.6"	""	"856"	"6"	"36.000"	"29.000"	"10.2670048934034"	"13"	"0.0006037"	"0.005911"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1118.54138"	"2236.07549"	"2236.07935"	"-1.73"	"-0.00193"	"9/166"	"9"	"166"	"458749.64074707"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"69.7362"	"22919"	"22919"	"22897"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.3"	""	"15.5"	""	"23.3"	""	"27.5"	"1.3"	"40.9"	"38.5"	""	"864"	"62"	"36.000"	"29.000"	"2.54966866634237E-05"	"16"	"0.0001308"	"0.0002274"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPK.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"746.03070"	"2236.07755"	"2236.07935"	"-0.81"	"-0.00060"	"19/166"	"19"	"166"	"961498.56439209"	"HCD"	"MS2"	"13.98685"	"20.8"	"100.000"	"73.0947"	"24290"	"24290"	"24271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.2"	""	"20.5"	""	"23.2"	""	"43.6"	""	"42.9"	"44.3"	""	"873"	"43"	"36.000"	"29.000"	"0.00201365121295606"	"17"	"0"	"4.002E-06"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1118.54248"	"2236.07768"	"2236.07935"	"-0.75"	"-0.00083"	"10/166"	"10"	"166"	"1127329.92901611"	"HCD"	"MS2"	"0"	"39.2"	"100.000"	"69.5802"	"22804"	"22804"	"22778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.2"	""	"52.7"	""	"42.7"	""	"59.0"	""	"82.4"	"85.7"	""	"873"	"77"	"36.000"	"29.000"	"7.79801826422919E-07"	"17"	"0"	"0.0001718"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"746.03076"	"2236.07773"	"2236.07935"	"-0.72"	"-0.00054"	"12/166"	"12"	"166"	"910930.493103027"	"HCD"	"MS2"	"24.46362"	"41.2"	"100.000"	"69.9980"	"23026"	"23026"	"23002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.8"	""	"51.5"	""	"53.8"	""	"60.0"	"0.7"	"82.9"	"86.0"	""	"873"	"13"	"36.000"	"29.000"	"2.23349121213344"	"14"	"0.0004166"	"0.002471"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9718"	"0.0000"	"1"	"1"	"1"	"1118.54260"	"2236.07793"	"2236.07935"	"-0.64"	"-0.00071"	"10/166"	"10"	"166"	"533749.755859375"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"69.8922"	"22931"	"22931"	"22912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.4"	""	"22.3"	""	"27.8"	""	"34.0"	""	"50.0"	"48.4"	""	"875"	"71"	"36.000"	"29.000"	"3.81924973669799E-06"	"19"	"0"	"0.0001013"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"746.03101"	"2236.07846"	"2236.07935"	"-0.40"	"-0.00030"	"17/166"	"17"	"166"	"4273568.22668457"	"HCD"	"MS2"	"1.96138"	"111.5"	"100.000"	"69.8510"	"22914"	"22914"	"22901"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"119.0"	"2.4"	"128.8"	""	"146.4"	""	"170.4"	""	"248.3"	"245.0"	""	"886"	"34"	"36.000"	"29.000"	"0.0195165804533403"	"16"	"0"	"0.0001273"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.7778"	"0.0000"	"1"	"1"	"1"	"559.77509"	"2236.07851"	"2236.07935"	"-0.37"	"-0.00021"	"11/166"	"11"	"166"	"1976455.51196289"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"69.7730"	"22883"	"22883"	"22858"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.8"	""	"51.6"	""	"55.5"	""	"61.7"	""	"81.9"	"90.0"	""	"886"	"18"	"36.000"	"29.000"	"0.713516016383974"	"17"	"0"	"0.0001362"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"746.03107"	"2236.07865"	"2236.07935"	"-0.31"	"-0.00023"	"11/166"	"11"	"166"	"4621210.3538208"	"HCD"	"MS2"	"3.429998"	"114.2"	"100.000"	"69.6836"	"22898"	"22898"	"22882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"145.1"	""	"125.9"	""	"152.0"	""	"172.7"	""	"253.4"	"236.6"	""	"886"	"28"	"36.000"	"29.000"	"0.0656755511719658"	"15"	"0.0001308"	"0.000226"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9863"	"0.0000"	"1"	"1"	"1"	"1118.54297"	"2236.07866"	"2236.07935"	"-0.31"	"-0.00034"	"10/166"	"10"	"166"	"1167915.38519287"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"69.4082"	"22785"	"22785"	"22762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.7"	""	"43.3"	""	"49.4"	""	"65.2"	"0.2"	"97.5"	"95.0"	""	"886"	"73"	"36.000"	"29.000"	"1.99252475717727E-06"	"18"	"0"	"0.0001126"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.5000"	"0.0000"	"1"	"1"	"1"	"559.77515"	"2236.07876"	"2236.07935"	"-0.27"	"-0.00015"	"13/166"	"13"	"166"	"2911885.29907227"	"HCD"	"MS2"	"30.37101"	"56.3"	"100.000"	"69.5299"	"22835"	"22835"	"22810"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.0"	""	"65.7"	""	"76.3"	""	"90.4"	"2.5"	"117.3"	"113.4"	""	"887"	"14"	"36.000"	"29.000"	"1.60285274080668"	"21"	"0.0002277"	"0.001182"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPK.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8704"	"0.0000"	"1"	"1"	"1"	"746.03131"	"2236.07938"	"2236.07935"	"0.01"	"0.00001"	"19/166"	"19"	"166"	"996308.672119141"	"HCD"	"MS2"	"13.34724"	"25.8"	"100.000"	"73.1291"	"24253"	"24253"	"24225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.5"	""	"28.2"	""	"30.2"	""	"50.9"	""	"53.5"	"53.9"	""	"894"	"54"	"36.000"	"29.000"	"0.000197837002446094"	"23"	"0"	"8.374E-06"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.03168"	"2236.08048"	"2236.07935"	"0.50"	"0.00038"	"13/166"	"13"	"166"	"6450726.70501709"	"HCD"	"MS2"	"24.66793"	"150.7"	"100.000"	"69.5667"	"22798"	"22798"	"22778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"188.2"	""	"176.5"	""	"192.2"	""	"237.8"	""	"332.4"	"304.9"	""	"906"	"19"	"36.000"	"29.000"	"0.616734441157076"	"14"	"0.0001889"	"0.000539"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"746.03198"	"2236.08139"	"2236.07935"	"0.91"	"0.00068"	"21/166"	"21"	"166"	"5469165.71575928"	"HCD"	"MS2"	"3.957869"	"124.8"	"100.000"	"69.4036"	"22783"	"22783"	"22762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"154.9"	""	"146.8"	""	"167.2"	""	"198.3"	"3.1"	"253.9"	"260.9"	""	"908"	"58"	"36.000"	"29.000"	"7.87147014980379E-05"	"18"	"0"	"1.126E-05"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAIMGNPk.[V]"	"K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.03259"	"2236.08323"	"2236.07935"	"1.73"	"0.00129"	"5/166"	"5"	"166"	"671899.917053223"	"HCD"	"MS2"	"10.87089"	"38.3"	"100.000"	"71.6136"	"23634"	"23634"	"23603"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.8"	""	"50.3"	""	"56.1"	""	"65.1"	"1.7"	"65.5"	"75.4"	""	"931"	"3"	"36.000"	"29.000"	"21.7730708269191"	"13"	"0.001966"	"0.02785"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAEETAATISAIEAMK"	"[R].lLAEETAATISAIEAmk.[N]"	"N-Term(TMT6plex); M16(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.08704"	"2236.24656"	"2236.25106"	"-2.01"	"-0.00150"	"13/148"	"13"	"148"	"850034.749328613"	"HCD"	"MS2"	"10.5355"	"11.1"	"100.000"	"83.8151"	"28652"	"28652"	"28631"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.1"	""	"12.3"	""	"16.0"	""	"18.8"	""	"21.2"	"21.7"	""	"1071"	"15"	"37.000"	"30.000"	"1.60605152891789"	"13"	"0.0001308"	"0.0002794"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIRPALELLEPIEQK"	"[K].eIRPALELLEPIEQk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.11566"	"2236.33243"	"2236.33169"	"0.33"	"0.00025"	"9/160"	"9"	"160"	"1332960.87896729"	"HCD"	"MS2"	"7.756036"	"75.1"	"100.000"	"63.4228"	"20351"	"20351"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.1"	""	"94.3"	""	"102.1"	""	"125.5"	"1.1"	"139.3"	"137.7"	""	"459"	"16"	"33.000"	"26.000"	"0.567260691281202"	"14"	"0"	"7.681E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIRPALELLEPIEQK"	"[K].eIRPALELLEPIEQk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.11572"	"2236.33261"	"2236.33169"	"0.41"	"0.00031"	"10/160"	"10"	"160"	"1399988.14001465"	"HCD"	"MS2"	"28.06757"	"75.0"	"100.000"	"63.3736"	"20278"	"20278"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.1"	""	"106.9"	""	"105.9"	""	"114.1"	"0.7"	"132.8"	"131.7"	""	"459"	"24"	"33.000"	"26.000"	"0.101340417667585"	"14"	"0"	"1.531E-05"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGLLPLTFADPSDYNK"	"[K].qGLLPLTFADPSDYNk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1119.11353"	"2237.21977"	"2237.22180"	"-0.91"	"-0.00102"	"3/162"	"3"	"162"	"76920.0961303711"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"72.7696"	"24158"	"24158"	"24127"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"2.8"	""	"4.0"	""	"6.4"	""	"4.3"	"8.6"	""	"1241"	"3"	"37.000"	"30.000"	"32.2657515849047"	"13"	"0.002099"	"0.03194"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGLLPLTFADPSDYNK"	"[K].qGLLPLTFADPSDYNk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"746.41150"	"2237.21994"	"2237.22180"	"-0.83"	"-0.00062"	"14/162"	"14"	"162"	"1826336.46862793"	"HCD"	"MS2"	"4.786309"	"63.9"	"100.000"	"72.5411"	"24013"	"24013"	"23985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.2"	""	"95.8"	""	"82.5"	""	"88.8"	""	"110.7"	"112.1"	""	"1241"	"38"	"37.000"	"30.000"	"0.00903112359501111"	"16"	"0"	"2.575E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGLLPLTFADPSDYNK"	"[K].qGLLPLTFADPSDYNk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"746.41235"	"2237.22251"	"2237.22180"	"0.31"	"0.00023"	"15/162"	"15"	"162"	"2328668.87042236"	"HCD"	"MS2"	"2.32541"	"69.3"	"100.000"	"72.5143"	"24053"	"24053"	"24031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"126.6"	""	"93.8"	""	"96.6"	""	"91.4"	""	"118.4"	"129.6"	""	"1243"	"45"	"37.000"	"30.000"	"0.00189426673605379"	"16"	"0"	"1.871E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSQFIGYPITLFVEK"	"[K].hSQFIGYPITLFVEk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"746.42926"	"2237.27323"	"2237.27345"	"-0.10"	"-0.00007"	"6/160"	"6"	"160"	"3874803.00787354"	"HCD"	"MS2"	"1.705899"	"94.1"	"100.000"	"69.1274"	"22670"	"22670"	"22650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.3"	""	"116.6"	""	"133.8"	""	"159.8"	""	"183.0"	"167.7"	""	"949"	"35"	"36.000"	"29.000"	"0.0137162760418242"	"25"	"0"	"2.378E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSQFIGYPITLFVEK"	"[K].hSQFIGYPITLFVEk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"746.42950"	"2237.27396"	"2237.27345"	"0.23"	"0.00017"	"16/160"	"16"	"160"	"3360793.70202637"	"HCD"	"MS2"	"4.733751"	"89.0"	"100.000"	"69.2577"	"22672"	"22672"	"22650"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.8"	""	"114.9"	""	"131.3"	""	"146.5"	""	"175.8"	"154.5"	""	"940"	"41"	"36.000"	"29.000"	"0.00348415813411431"	"26"	"0"	"3.035E-06"	"1.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGIDKDAIVQAVK"	"[K].mFGIDkDAIVQAVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K6(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.77655"	"2238.31510"	"2238.31349"	"0.72"	"0.00054"	"13/124"	"13"	"124"	"2846610.11700439"	"HCD"	"MS2"	"28.60889"	"178.0"	"100.000"	"58.6886"	"18369"	"18369"	"18345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"208.1"	""	"165.6"	""	"175.7"	""	"529.9"	"0.2"	"309.4"	"297.5"	""	"572"	"4"	"34.000"	"27.000"	"11.0500955437464"	"13"	"0.003507"	"0.07955"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGIDKDAIVQAVK"	"[K].mFGIDkDAIVQAVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K6(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.77655"	"2238.31510"	"2238.31349"	"0.72"	"0.00054"	"9/124"	"9"	"124"	"3329305.42700195"	"HCD"	"MS2"	"24.95468"	"204.1"	"100.000"	"58.8665"	"18491"	"18491"	"18469"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"217.4"	""	"178.0"	""	"174.3"	""	"607.4"	"1.2"	"394.4"	"364.7"	""	"572"	"7"	"34.000"	"27.000"	"6.19963373978433"	"13"	"0.008558"	"0.3631"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APVDFGYVGIDSILEQMR"	"[K].aPVDFGYVGIDSILEQMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"747.05853"	"2239.16104"	"2239.16302"	"-0.88"	"-0.00066"	"7/162"	"7"	"162"	"140454.946960449"	"HCD"	"MS2"	"34.21365"	"4.1"	"100.000"	"93.5331"	"32266"	"32266"	"32257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.8"	""	"4.4"	""	"7.0"	""	"6.0"	""	"8.2"	"8.3"	""	"1259"	"2"	"37.000"	"31.000"	"37.0677081046344"	"13"	"0.001058"	"0.0141"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APVDFGYVGIDSILEQMR"	"[K].aPVDFGYVGIDSILEQMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"747.05957"	"2239.16416"	"2239.16302"	"0.51"	"0.00038"	"10/162"	"10"	"162"	"187886.153259277"	"HCD"	"MS2"	"27.63016"	"4.6"	"100.000"	"93.3687"	"32186"	"32186"	"32181"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.0"	""	"5.1"	""	"7.9"	""	"6.8"	""	"9.0"	"8.8"	""	"1305"	"12"	"38.000"	"31.000"	"4.06986980152279"	"13"	"0.0004557"	"0.002592"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQFLSGIPETVPLSAVNR"	"[R].iAQFLSGIPETVPLSAVNR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"P07871"	"3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"P21775; P07871"	"3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1a PE=1 SV=2; 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"747.76471"	"2241.27958"	"2241.28043"	"-0.38"	"-0.00029"	"17/194"	"17"	"194"	"1240407.97644043"	"HCD"	"MS2"	"7.208059"	"10.6"	"100.000"	"84.5016"	"28932"	"28932"	"28913"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.8"	""	"8.5"	""	"15.3"	""	"17.9"	""	"23.6"	"19.2"	""	"889"	"58"	"36.000"	"29.000"	"6.74328888335676E-05"	"16"	"0"	"3.063E-06"	"1.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQFLSGIPETVPLSAVNR"	"[R].iAQFLSGIPETVPLSAVNR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"P07871"	"3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"P21775; P07871"	"3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1a PE=1 SV=2; 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus OX=10116 GN=Acaa1b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"747.76520"	"2241.28104"	"2241.28043"	"0.27"	"0.00020"	"17/194"	"17"	"194"	"786183.750488281"	"HCD"	"MS2"	"12.35491"	"9.8"	"100.000"	"84.3204"	"28807"	"28807"	"28785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"8.9"	""	"15.5"	""	"18.1"	""	"19.1"	"19.4"	""	"866"	"41"	"36.000"	"29.000"	"0.00345531699587034"	"15"	"0"	"2.817E-06"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAEAHHTAYAVYSLSK"	"[R].hAEAHHTAYAVYSLSk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.55414"	"2243.19472"	"2243.19732"	"-1.16"	"-0.00065"	"16/144"	"16"	"144"	"6045799.54968262"	"HCD"	"MS2"	"8.824098"	"150.2"	"100.000"	"29.4092"	"6490"	"6490"	"6468"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.5"	""	"208.4"	""	"203.7"	""	"271.5"	"0.7"	"249.6"	"254.8"	""	"1289"	"16"	"38.000"	"31.000"	"1.49012575726817"	"14"	"0"	"0.0001005"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAEAHHTAYAVYSLSK"	"[R].hAEAHHTAYAVYSLSk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.55420"	"2243.19497"	"2243.19732"	"-1.05"	"-0.00059"	"11/144"	"11"	"144"	"4978620.89752197"	"HCD"	"MS2"	"7.478912"	"136.7"	"100.000"	"29.3627"	"6430"	"6430"	"6406"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.3"	""	"194.9"	""	"197.0"	""	"224.3"	"1.0"	"216.0"	"241.0"	""	"1282"	"18"	"38.000"	"31.000"	"1.03958027240707"	"14"	"0"	"5.138E-05"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAEAHHTAYAVYSLSK"	"[R].hAEAHHTAYAVYSLSk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.40356"	"2243.19614"	"2243.19732"	"-0.53"	"-0.00039"	"9/144"	"9"	"144"	"1523842.00952148"	"HCD"	"MS2"	"41.70068"	"47.7"	"100.000"	"29.3153"	"6452"	"6452"	"6423"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.4"	""	"58.0"	""	"57.7"	""	"128.5"	""	"55.2"	"70.3"	""	"1270"	"52"	"38.000"	"31.000"	"0.000409047483602138"	"16"	"0"	"3.993E-06"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAEAHHTAYAVYSLSK"	"[R].hAEAHHTAYAVYSLSk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.40375"	"2243.19669"	"2243.19732"	"-0.28"	"-0.00021"	"9/144"	"9"	"144"	"1348833.06201172"	"HCD"	"MS2"	"0"	"44.6"	"100.000"	"29.3009"	"6405"	"6405"	"6374"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.3"	""	"58.4"	""	"45.3"	""	"110.9"	""	"57.1"	"66.3"	""	"1251"	"46"	"37.000"	"30.000"	"0.00154250760544008"	"15"	"0"	"7.626E-06"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYIGSFWSHPLLIPDNR"	"[R].vYIGSFWSHPLLIPDNR.[K]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.40973"	"2243.21463"	"2243.21744"	"-1.25"	"-0.00094"	"12/150"	"12"	"150"	"1123499.79150391"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"73.7451"	"24556"	"24556"	"24527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.8"	""	"22.9"	""	"34.1"	""	"36.4"	""	"39.1"	"45.9"	""	"1237"	"40"	"37.000"	"30.000"	"0.00693968413985764"	"15"	"0"	"5.228E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYIGSFWSHPLLIPDNR"	"[R].vYIGSFWSHPLLIPDNR.[K]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.41071"	"2243.21756"	"2243.21744"	"0.06"	"0.00004"	"11/150"	"11"	"150"	"1221055.11181641"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"73.7982"	"24526"	"24526"	"24497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.5"	""	"35.3"	""	"42.6"	""	"43.3"	""	"48.5"	"51.7"	""	"1213"	"36"	"37.000"	"30.000"	"0.0170541785363696"	"15"	"0"	"7.215E-06"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNYNFEKPFLWLAR"	"[K].sNYNFEkPFLWLAR.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.41681"	"2243.23587"	"2243.23773"	"-0.83"	"-0.00062"	"13/138"	"13"	"138"	"2165458.55743408"	"HCD"	"MS2"	"2.605118"	"144.5"	"100.000"	"68.9262"	"22588"	"22588"	"22570"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"243.7"	""	"202.1"	""	"218.6"	""	"243.1"	""	"248.7"	"217.0"	""	"1159"	"7"	"37.000"	"30.000"	"11.1957563971131"	"13"	"0"	"3.121E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNYNFEKPFLWLAR"	"[K].sNYNFEkPFLWLAR.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.41730"	"2243.23734"	"2243.23773"	"-0.17"	"-0.00013"	"14/138"	"14"	"138"	"2063473.97332764"	"HCD"	"MS2"	"4.116159"	"139.2"	"100.000"	"69.0937"	"22605"	"22605"	"22586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.4"	""	"197.6"	""	"216.7"	""	"224.7"	""	"234.1"	"215.6"	""	"1171"	"10"	"37.000"	"30.000"	"5.95013609675793"	"13"	"0"	"2.377E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESQSILTPLVSLDTPGK"	"[R].eSQSILTPLVSLDTPGk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"3"	"3"	"0.8154"	"0.0000"	"1"	"1"	"1"	"748.43329"	"2243.28531"	"2243.28988"	"-2.04"	"-0.00152"	"16/182"	"16"	"182"	"1790669.68347168"	"HCD"	"MS2"	"34.17996"	"50.0"	"100.000"	"68.5552"	"22437"	"22437"	"22410"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.2"	""	"61.6"	""	"72.3"	""	"81.6"	"1.1"	"97.9"	"92.7"	""	"827"	"65"	"36.000"	"29.000"	"1.24015370160139E-05"	"28"	"0"	"1.277E-05"	"1.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESQSILTPLVSLDTPGK"	"[R].eSQSILTPLVSLDTPGk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"3"	"3"	"0.9552"	"0.0000"	"1"	"1"	"1"	"748.43402"	"2243.28751"	"2243.28988"	"-1.06"	"-0.00079"	"19/182"	"19"	"182"	"2471053.91870117"	"HCD"	"MS2"	"9.33209"	"65.1"	"100.000"	"68.7617"	"22470"	"22470"	"22442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.0"	""	"82.8"	""	"91.8"	""	"106.4"	""	"118.4"	"125.0"	""	"810"	"67"	"36.000"	"29.000"	"8.57936259775644E-06"	"20"	"0"	"1.196E-06"	"1.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLGETNPADSKPGTIR"	"[R].vMLGETNPADSkPGTIR.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1;Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.75226"	"2244.24222"	"2244.24222"	"0.00"	"0.00000"	"14/168"	"14"	"168"	"6582106.1529541"	"HCD"	"MS2"	"0"	"274.8"	"100.000"	"38.9884"	"10362"	"10362"	"10342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"478.2"	""	"406.1"	""	"451.6"	""	"373.7"	""	"441.2"	"447.0"	""	"1208"	"28"	"37.000"	"30.000"	"0.106914581082372"	"14"	"0"	"1.266E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMLGETNPADSKPGTIR"	"[R].vMLGETNPADSkPGTIR.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1;Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.75256"	"2244.24314"	"2244.24222"	"0.41"	"0.00030"	"13/168"	"13"	"168"	"6311201.04034424"	"HCD"	"MS2"	"2.422513"	"274.4"	"100.000"	"39.0606"	"10435"	"10435"	"10414"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"487.1"	""	"392.6"	""	"439.2"	""	"362.8"	"0.2"	"455.9"	"456.2"	""	"1201"	"25"	"37.000"	"30.000"	"0.183870904193125"	"14"	"0"	"3.815E-06"	"1.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSIDTNGISDYSLNIK"	"[K].fSIDTnGISDYSLNIk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"749.39984"	"2246.18497"	"2246.19565"	"-4.75"	"-0.00356"	"14/160"	"14"	"160"	"888378.926879883"	"HCD"	"MS2"	"0"	"47.5"	"100.000"	"73.2261"	"24344"	"24344"	"24319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.8"	""	"66.9"	"1.8"	"56.6"	""	"79.0"	""	"75.7"	"67.0"	""	"1433"	"48"	"38.000"	"31.000"	"0.00120009657067294"	"28"	"0"	"3.471E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSIDTNGISDYSLNIK"	"[K].fSIDTnGISDYSLNIk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6618"	"0.0000"	"1"	"1"	"1"	"749.40100"	"2246.18845"	"2246.19565"	"-3.21"	"-0.00240"	"15/160"	"15"	"160"	"861479.34765625"	"HCD"	"MS2"	"0"	"42.2"	"100.000"	"73.2745"	"24312"	"24312"	"24289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.7"	""	"69.6"	""	"56.3"	""	"57.6"	""	"59.0"	"62.5"	""	"1435"	"68"	"38.000"	"31.000"	"1.11640534067664E-05"	""	"0"	"4.381E-06"	"1.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSIDTNGISDYSLNIK"	"[K].fSIDTnGISDYSLNIk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K16(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1123.60083"	"2246.19438"	"2246.19565"	"-0.56"	"-0.00063"	"7/160"	"7"	"160"	"86630.3886108398"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"73.4428"	"24381"	"24381"	"24353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.6"	""	"7.7"	""	"7.8"	""	"9.0"	""	"3.8"	"5.7"	""	"1415"	"7"	"38.000"	"31.000"	"14.8158456251451"	"13"	"0.0006037"	"0.005321"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIPIVTSPYQIHFTK"	"[R].sGIPIVTSPYQIHFTk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.43604"	"2246.29355"	"2246.29491"	"-0.60"	"-0.00045"	"18/158"	"18"	"158"	"6794126.96368408"	"HCD"	"MS2"	"10.47094"	"194.0"	"100.000"	"58.8963"	"18503"	"18503"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"330.2"	""	"257.1"	""	"195.5"	""	"355.2"	""	"345.0"	"356.1"	""	"834"	"59"	"36.000"	"29.000"	"4.9904080155512E-05"	"16"	"0"	"1.346E-06"	"1.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIPIVTSPYQIHFTK"	"[R].sGIPIVTSPYQIHFTk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"0.9038"	"0.0000"	"1"	"1"	"1"	"562.32892"	"2246.29384"	"2246.29491"	"-0.47"	"-0.00027"	"12/158"	"12"	"158"	"6028761.52459717"	"HCD"	"MS2"	"58.08229"	"86.8"	"100.000"	"58.9615"	"18530"	"18530"	"18501"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.5"	""	"110.2"	""	"91.5"	""	"173.0"	"3.2"	"141.8"	"150.9"	""	"835"	"52"	"36.000"	"29.000"	"0.000279033585584897"	"21"	"0"	"4.169E-06"	"1.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIPIVTSPYQIHFTK"	"[R].sGIPIVTSPYQIHFTk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.43652"	"2246.29502"	"2246.29491"	"0.05"	"0.00004"	"14/158"	"14"	"158"	"2891878.83520508"	"HCD"	"MS2"	"9.601538"	"106.7"	"100.000"	"59.2193"	"18634"	"18634"	"18613"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"167.1"	""	"135.2"	""	"118.1"	""	"184.9"	"0.7"	"202.6"	"203.0"	""	"827"	"49"	"36.000"	"29.000"	"0.000535149980439569"	"16"	"0"	"1.912E-06"	"1.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIPIVTSPYQIHFTK"	"[R].sGIPIVTSPYQIHFTk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"0.8824"	"0.0000"	"1"	"1"	"1"	"562.32941"	"2246.29580"	"2246.29491"	"0.39"	"0.00022"	"8/158"	"8"	"158"	"5537642.61688232"	"HCD"	"MS2"	"28.29223"	"90.8"	"100.000"	"58.8106"	"18419"	"18419"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.3"	""	"123.8"	""	"83.4"	""	"182.2"	"1.2"	"144.1"	"174.3"	""	"814"	"34"	"36.000"	"29.000"	"0.0151563424445609"	"18"	"0"	"9.039E-06"	"1.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIPIVTSPYQIHFTK"	"[R].sGIPIVTSPYQIHFTk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.43701"	"2246.29648"	"2246.29491"	"0.70"	"0.00052"	"18/158"	"18"	"158"	"1930371.72711182"	"HCD"	"MS2"	"5.216997"	"84.6"	"100.000"	"59.1240"	"18542"	"18542"	"18521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"121.9"	""	"126.9"	""	"102.6"	""	"148.7"	"1.5"	"152.6"	"147.0"	""	"812"	"82"	"36.000"	"29.000"	"2.41282616397922E-07"	"18"	"0"	"4.267E-07"	"1.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIPIVTSPYQIHFTK"	"[R].sGIPIVTSPYQIHFTk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.43701"	"2246.29648"	"2246.29491"	"0.70"	"0.00052"	"16/158"	"16"	"158"	"8518917.42132568"	"HCD"	"MS2"	"10.12935"	"228.2"	"100.000"	"58.7944"	"18412"	"18412"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"370.2"	""	"302.9"	""	"227.3"	""	"465.0"	""	"397.7"	"400.4"	""	"812"	"48"	"36.000"	"29.000"	"0.000617342297071393"	"16"	"0"	"1.268E-06"	"1.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFDLQLPNFNPSEEK"	"[R].iFDLQLPNFNPSEEk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"750.41205"	"2249.22159"	"2249.22180"	"-0.09"	"-0.00007"	"14/154"	"14"	"154"	"556771.49798584"	"HCD"	"MS2"	"8.339272"	"20.9"	"100.000"	"81.7701"	"27767"	"27767"	"27744"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.8"	""	"26.5"	""	"30.6"	""	"32.4"	""	"38.8"	"42.2"	""	"1247"	"43"	"37.000"	"30.000"	"0.00282381641069908"	"23"	"0"	"0.000102"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFDLQLPNFNPSEEK"	"[R].iFDLQLPNFNPSEEk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"750.41211"	"2249.22177"	"2249.22180"	"-0.01"	"-0.00001"	"13/154"	"13"	"154"	"527250.464782715"	"HCD"	"MS2"	"44.20359"	"19.5"	"100.000"	"81.6497"	"27769"	"27769"	"27742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.3"	""	"22.9"	""	"22.6"	""	"36.6"	""	"39.3"	"41.0"	""	"1246"	"43"	"37.000"	"30.000"	"0.00281506253345577"	"26"	"0"	"9.816E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILPEAEGEAPFTLK"	"[K].yNILPEAEGEAPFTLk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.9130"	"0.0000"	"1"	"1"	"1"	"563.31506"	"2250.23842"	"2250.24221"	"-1.68"	"-0.00095"	"14/164"	"14"	"164"	"1664627.9576416"	"HCD"	"MS2"	"12.4398"	"40.2"	"100.000"	"71.5221"	"23648"	"23648"	"23626"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.2"	""	"59.3"	""	"54.4"	""	"68.7"	""	"65.7"	"60.4"	""	"1213"	"46"	"37.000"	"30.000"	"0.00143493029652511"	"19"	"0.0001308"	"0.0003059"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILPEAEGEAPFTLK"	"[K].yNILPEAEGEAPFTLk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"750.75153"	"2250.24002"	"2250.24221"	"-0.97"	"-0.00073"	"17/164"	"17"	"164"	"6041625.48754883"	"HCD"	"MS2"	"4.205008"	"140.1"	"100.000"	"71.2942"	"23555"	"23555"	"23530"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"254.0"	""	"256.2"	""	"178.4"	""	"231.1"	"1.2"	"217.5"	"184.5"	""	"1212"	"50"	"37.000"	"30.000"	"0.00063019162049241"	"19"	"0"	"2.501E-06"	"1.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILPEAEGEAPFTLK"	"[K].yNILPEAEGEAPFTLk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"1125.62366"	"2250.24004"	"2250.24221"	"-0.96"	"-0.00108"	"13/164"	"13"	"164"	"323065.691589355"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"71.3793"	"23590"	"23590"	"23562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.8"	""	"35.3"	""	"19.1"	""	"27.1"	""	"24.0"	"21.8"	""	"1212"	"50"	"37.000"	"30.000"	"0.000557792440482422"	"25"	"0.0001308"	"0.0002868"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILPEAEGEAPFTLK"	"[K].yNILPEAEGEAPFTLk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"750.75171"	"2250.24057"	"2250.24221"	"-0.73"	"-0.00054"	"7/164"	"7"	"164"	"7007218.02062988"	"HCD"	"MS2"	"5.542124"	"173.9"	"100.000"	"71.3949"	"23544"	"23544"	"23523"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"303.5"	""	"335.0"	""	"218.6"	""	"269.9"	""	"271.8"	"244.1"	""	"1198"	"41"	"37.000"	"30.000"	"0.00501680039994003"	"18"	"0"	"7.653E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILPEAEGEAPFTLK"	"[K].yNILPEAEGEAPFTLk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"750.75201"	"2250.24149"	"2250.24221"	"-0.32"	"-0.00024"	"14/164"	"14"	"164"	"4330320.90057373"	"HCD"	"MS2"	"11.57853"	"121.1"	"100.000"	"71.6967"	"23668"	"23668"	"23651"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.9"	""	"209.4"	""	"155.9"	""	"192.1"	""	"191.4"	"190.9"	""	"1203"	"38"	"37.000"	"30.000"	"0.00944573226806632"	"18"	"0"	"1.204E-05"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILPEAEGEAPFTLK"	"[K].yNILPEAEGEAPFTLk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"1125.62476"	"2250.24224"	"2250.24221"	"0.01"	"0.00001"	"10/164"	"10"	"164"	"438625.850769043"	"HCD"	"MS2"	"0"	"26.4"	"100.000"	"71.4799"	"23579"	"23579"	"23555"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.8"	""	"47.7"	""	"28.4"	""	"42.2"	""	"45.8"	"34.5"	""	"1190"	"36"	"37.000"	"30.000"	"0.0146729340565443"	"23"	"0.0001889"	"0.0005378"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILPEAEGEAPFTLK"	"[K].yNILPEAEGEAPFTLk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"750.75232"	"2250.24240"	"2250.24221"	"0.09"	"0.00007"	"14/164"	"14"	"164"	"5842222.07122803"	"HCD"	"MS2"	"11.45146"	"160.7"	"99.952"	"71.5912"	"23676"	"23676"	"23658"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"258.2"	""	"262.9"	""	"216.8"	""	"249.6"	""	"272.8"	"261.8"	""	"1190"	"36"	"37.000"	"30.000"	"0.0141748008426842"	"17"	"0"	"3.178E-06"	"1.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNILPEAEGEAPFTLK"	"[K].yNILPEAEGEAPFTLk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.9048"	"0.0000"	"1"	"1"	"1"	"563.31635"	"2250.24355"	"2250.24221"	"0.60"	"0.00034"	"16/164"	"16"	"164"	"1821415.13208008"	"HCD"	"MS2"	"5.258801"	"40.8"	"100.000"	"71.5998"	"23628"	"23628"	"23603"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.5"	""	"59.8"	""	"47.0"	""	"64.3"	"0.2"	"74.1"	"66.1"	""	"1174"	"63"	"37.000"	"30.000"	"3.01743623478884E-05"	"22"	"0"	"2.374E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEAAGTLVTLSSAPTAIK"	"[K].yEAAGTLVTLSSAPTAIk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"751.10278"	"2251.29380"	"2251.29497"	"-0.52"	"-0.00039"	"17/162"	"17"	"162"	"2415141.37017822"	"HCD"	"MS2"	"6.17175"	"72.6"	"100.000"	"62.0654"	"19743"	"19743"	"19721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.3"	""	"84.8"	""	"96.5"	""	"125.7"	"2.5"	"138.0"	"153.9"	""	"871"	"50"	"36.000"	"29.000"	"0.000449767592209089"	"19"	"0"	"5.354E-06"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEAAGTLVTLSSAPTAIK"	"[K].yEAAGTLVTLSSAPTAIk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"751.10333"	"2251.29544"	"2251.29497"	"0.21"	"0.00016"	"15/162"	"15"	"162"	"764669.567443848"	"HCD"	"MS2"	"3.170022"	"46.9"	"100.000"	"62.2401"	"19815"	"19815"	"19785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.9"	""	"57.7"	""	"64.3"	""	"71.4"	"0.8"	"88.6"	"103.4"	""	"847"	"20"	"36.000"	"29.000"	"0.460101251601827"	"15"	"0"	"0.0001759"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEAAGTLVTLSSAPTAIK"	"[K].yEAAGTLVTLSSAPTAIk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8806"	"0.0000"	"1"	"1"	"1"	"751.10339"	"2251.29563"	"2251.29497"	"0.29"	"0.00022"	"18/162"	"18"	"162"	"2641533.77215576"	"HCD"	"MS2"	"0"	"77.3"	"100.000"	"62.1209"	"19819"	"19819"	"19795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.5"	""	"100.4"	""	"95.5"	""	"135.5"	"1.3"	"165.0"	"150.0"	""	"845"	"67"	"36.000"	"29.000"	"9.3718798736559E-06"	"25"	"0"	"2.29E-07"	"1.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVLGASGGIGQPLSLLLK"	"[K].vAVLGASGGIGQPLSLLLk.[N]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1126.21045"	"2251.41362"	"2251.41536"	"-0.77"	"-0.00087"	"10/174"	"10"	"174"	"83366.7891235352"	"HCD"	"MS2"	"29.66003"	"3.2"	"100.000"	"88.7533"	"30616"	"30616"	"30600"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.1"	""	"2.9"	""	"4.8"	""	"7.3"	""	"4.7"	"6.4"	""	"112"	"21"	"27.000"	"20.000"	"0.0401964803111962"	"14"	"0.0001889"	"0.0009726"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVLGASGGIGQPLSLLLK"	"[K].vAVLGASGGIGQPLSLLLk.[N]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"1126.21082"	"2251.41435"	"2251.41536"	"-0.45"	"-0.00050"	"8/174"	"8"	"174"	"103073.956237793"	"HCD"	"MS2"	"47.85959"	"5.0"	"100.000"	"88.5810"	"30509"	"30509"	"30493"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"9.5"	""	"6.2"	""	"7.4"	""	"10.6"	"8.6"	""	"104"	"14"	"27.000"	"20.000"	"0.220802173252083"	"15"	"0.0003839"	"0.001929"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVLGASGGIGQPLSLLLK"	"[K].vAVLGASGGIGQPLSLLLk.[N]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"751.14301"	"2251.41446"	"2251.41536"	"-0.40"	"-0.00030"	"18/174"	"18"	"174"	"462864.784057617"	"HCD"	"MS2"	"8.678251"	"14.9"	"100.000"	"88.5718"	"30505"	"30505"	"30493"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.5"	""	"18.9"	""	"24.7"	""	"27.0"	""	"22.1"	"30.3"	""	"104"	"75"	"27.000"	"20.000"	"1.51009178032151E-07"	""	"0"	"1.954E-06"	"1.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVLGASGGIGQPLSLLLK"	"[K].vAVLGASGGIGQPLSLLLk.[N]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9368"	"0.0000"	"1"	"1"	"1"	"751.14325"	"2251.41520"	"2251.41536"	"-0.07"	"-0.00005"	"20/174"	"20"	"174"	"437931.966003418"	"HCD"	"MS2"	"29.54707"	"13.0"	"100.000"	"88.6841"	"30590"	"30590"	"30574"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.3"	""	"19.3"	""	"24.5"	""	"19.9"	""	"20.3"	"24.6"	""	"100"	"95"	"26.000"	"20.000"	"1.50997586020101E-09"	""	"0"	"3.117E-07"	"1.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].YFDSFGDLSSASAImGNPk.[V]"	"M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1126.53967"	"2252.07207"	"2252.07427"	"-0.98"	"-0.00110"	"5/166"	"5"	"166"	"141361.479370117"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"57.8885"	"18042"	"18042"	"18011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.7"	""	"1.9"	""	"5.8"	""	"9.0"	""	"10.1"	"10.2"	""	"761"	"20"	"35.000"	"28.000"	"0.342258829772178"	"14"	"0.00162"	"0.02238"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPAIFTYHDVGLNYK"	"[K].rPAIFTYHDVGLNYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"563.81909"	"2252.25454"	"2252.25919"	"-2.07"	"-0.00116"	"6/146"	"6"	"146"	"17782214.0682373"	"HCD"	"MS2"	"27.22965"	"187.4"	"42.632"	"42.4390"	"11814"	"11814"	"11795"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"269.1"	""	"285.3"	""	"279.7"	""	"277.3"	""	"318.6"	"343.8"	""	"1218"	"10"	"37.000"	"30.000"	"5.99262763408529"	"13"	"0"	"5.856E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPAIFTYHDVGLNYK"	"[K].rPAIFTYHDVGLNYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"0"	"4"	"4"	"0.9286"	"0.0000"	"1"	"1"	"1"	"563.81915"	"2252.25478"	"2252.25919"	"-1.96"	"-0.00110"	"13/146"	"13"	"146"	"17047738.0480347"	"HCD"	"MS2"	"39.75608"	"359.8"	"93.177"	"42.0494"	"11611"	"11611"	"11591"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"555.4"	""	"589.3"	""	"559.4"	""	"487.8"	"5.0"	"574.8"	"631.1"	""	"1215"	"14"	"37.000"	"30.000"	"2.19051525635648"	"14"	"7.476E-05"	"0.0002004"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLPEELTPLILETQK"	"[K].gLLPEELTPLILETQk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"1126.67700"	"2252.34673"	"2252.35176"	"-2.23"	"-0.00251"	"6/140"	"6"	"140"	"92170.2748413086"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"85.9370"	"29512"	"29512"	"29483"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.2"	""	"6.4"	""	"2.9"	""	"8.1"	""	"7.3"	"7.6"	""	"402"	"8"	"33.000"	"26.000"	"3.10596142347221"	"14"	"0.00103"	"0.01235"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLPEELTPLILETQK"	"[K].gLLPEELTPLILETQk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1126.67725"	"2252.34722"	"2252.35176"	"-2.02"	"-0.00227"	"4/140"	"4"	"140"	"94280.2994384766"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"85.8988"	"29445"	"29445"	"29416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.3"	""	"6.5"	""	"5.2"	""	"5.4"	""	"5.5"	"6.5"	""	"402"	"2"	"33.000"	"26.000"	"12.5082357319001"	"13"	"0.001846"	"0.02604"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLPEELTPLILETQK"	"[K].gLLPEELTPLILETQk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"751.45465"	"2252.34940"	"2252.35176"	"-1.05"	"-0.00079"	"16/140"	"16"	"140"	"2424334.6282959"	"HCD"	"MS2"	"22.22342"	"56.0"	"100.000"	"85.7046"	"29370"	"29370"	"29352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.4"	""	"59.9"	""	"59.4"	""	"129.8"	""	"107.5"	"95.8"	""	"396"	"50"	"32.000"	"25.000"	"0.000220122882001755"	"16"	"0"	"2.88E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLPEELTPLILETQK"	"[K].gLLPEELTPLILETQk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"751.45490"	"2252.35013"	"2252.35176"	"-0.72"	"-0.00054"	"15/140"	"15"	"140"	"3485467.56707764"	"HCD"	"MS2"	"69.36761"	"75.3"	"100.000"	"85.8318"	"29469"	"29469"	"29453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.7"	""	"76.3"	""	"88.0"	""	"155.8"	""	"148.6"	"140.1"	""	"402"	"43"	"33.000"	"26.000"	"0.000899903741394488"	"15"	"0"	"8.337E-06"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLPEELTPLILETQK"	"[K].gLLPEELTPLILETQk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"751.45520"	"2252.35105"	"2252.35176"	"-0.31"	"-0.00024"	"14/140"	"14"	"140"	"961092.124145508"	"HCD"	"MS2"	"40.86209"	"26.4"	"100.000"	"85.9917"	"29482"	"29482"	"29464"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.4"	""	"31.1"	""	"31.9"	""	"49.7"	""	"53.0"	"50.4"	""	"381"	"39"	"32.000"	"25.000"	"0.00246544307796222"	"15"	"0"	"0.0001283"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYHPEKDDGMLSK"	"[R].fYHPEkDDGMLSk.[L]"	"N-Term(TMT6plex); K6(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.30865"	"2254.21279"	"2254.21450"	"-0.76"	"-0.00043"	"7/124"	"7"	"124"	"33618392.9465332"	"HCD"	"MS2"	"42.07964"	"497.3"	"39.226"	"38.1876"	"10077"	"10077"	"10049"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1084.4"	""	"790.9"	""	"620.6"	""	"549.0"	"3.4"	"854.2"	"796.2"	""	"1256"	"7"	"37.000"	"30.000"	"13.3033079293606"	"13"	"0.0001308"	"0.0002968"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPDDMPAFPLFSAFGR"	"[R].kPDDMPAFPLFSAFGR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"752.07581"	"2254.21286"	"2254.20947"	"1.51"	"0.00113"	"11/168"	"11"	"168"	"1604002.60742188"	"HCD"	"MS2"	"36.36873"	"67.2"	"100.000"	"74.3910"	"24819"	"24819"	"24799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"78.2"	""	"78.7"	""	"82.9"	""	"100.7"	""	"144.2"	"155.3"	""	"1258"	"18"	"37.000"	"30.000"	"1.05111599640144"	"14"	"0"	"1.452E-05"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYHPEKDDGMLSK"	"[R].fYHPEkDDGMLSk.[L]"	"N-Term(TMT6plex); K6(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.30878"	"2254.21328"	"2254.21450"	"-0.54"	"-0.00031"	"7/124"	"7"	"124"	"39120616.0253906"	"HCD"	"MS2"	"12.46969"	"330.9"	"22.336"	"38.1290"	"10009"	"10009"	"9991"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"729.0"	""	"507.8"	""	"414.8"	""	"356.6"	""	"578.6"	"545.0"	""	"1267"	"6"	"38.000"	"31.000"	"15.8762021179585"	"13"	"0.0001308"	"0.0002476"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWMSGk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.9844"	"0.0000"	"1"	"1"	"1"	"752.08423"	"2254.23813"	"2254.24183"	"-1.64"	"-0.00123"	"19/158"	"19"	"158"	"17052242.5512695"	"HCD"	"MS2"	"7.264565"	"383.6"	"69.260"	"54.0571"	"16530"	"16530"	"16518"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"812.5"	""	"678.9"	""	"433.4"	""	"318.1"	""	"729.4"	"660.8"	""	"1190"	"64"	"37.000"	"30.000"	"2.65165467796515E-05"	"17"	"0"	"2.504E-06"	"1.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWMSGk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.31512"	"2254.23867"	"2254.24183"	"-1.40"	"-0.00079"	"15/158"	"15"	"158"	"7786824.5211792"	"HCD"	"MS2"	"0"	"154.7"	"100.000"	"53.9425"	"16429"	"16429"	"16414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.9"	""	"259.1"	""	"192.8"	""	"148.1"	""	"288.1"	"267.3"	""	"1188"	"51"	"37.000"	"30.000"	"0.000475101547474175"	"16"	"0"	"2.312E-06"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWMSGk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.9831"	"0.0000"	"1"	"1"	"1"	"752.08441"	"2254.23868"	"2254.24183"	"-1.40"	"-0.00105"	"17/158"	"17"	"158"	"30037721.4406738"	"HCD"	"MS2"	"0"	"216.6"	"24.071"	"54.1396"	"16510"	"16510"	"16493"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"478.1"	""	"348.9"	""	"244.9"	""	"174.4"	""	"428.2"	"376.0"	""	"1188"	"59"	"37.000"	"30.000"	"6.85151235145729E-05"	"17"	"0"	"6.898E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWMSGk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.08441"	"2254.23868"	"2254.24183"	"-1.40"	"-0.00105"	"18/158"	"18"	"158"	"13193319.6096802"	"HCD"	"MS2"	"9.460769"	"323.3"	"76.154"	"53.8577"	"16396"	"16396"	"16387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"678.5"	""	"554.8"	""	"398.2"	""	"287.1"	""	"613.6"	"529.5"	""	"1188"	"57"	"37.000"	"30.000"	"0.000132980035630959"	"16"	"0"	"5.139E-06"	"1.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWMSGk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"752.08459"	"2254.23923"	"2254.24183"	"-1.15"	"-0.00087"	"20/158"	"20"	"158"	"19543279.7084961"	"HCD"	"MS2"	"0"	"203.0"	"33.471"	"54.3574"	"16652"	"16652"	"16637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"409.2"	""	"335.9"	""	"235.7"	""	"169.2"	""	"404.0"	"371.4"	""	"1183"	"70"	"37.000"	"30.000"	"5.95600082125842E-06"	"22"	"0"	"1.423E-06"	"1.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWMSGk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"752.08472"	"2254.23960"	"2254.24183"	"-0.99"	"-0.00074"	"16/158"	"16"	"158"	"5185313.01391602"	"HCD"	"MS2"	"12.67859"	"206.9"	"100.000"	"54.4263"	"16626"	"16626"	"16609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"335.4"	""	"330.1"	""	"263.4"	""	"284.4"	""	"381.1"	"367.6"	""	"1182"	"47"	"37.000"	"30.000"	"0.00123762046140788"	"17"	"0"	"5.32E-06"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWMSGk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.31580"	"2254.24135"	"2254.24183"	"-0.21"	"-0.00012"	"15/158"	"15"	"158"	"11115872.1749878"	"HCD"	"MS2"	"0"	"207.3"	"100.000"	"54.2173"	"16594"	"16594"	"16577"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"437.1"	""	"313.3"	""	"246.4"	""	"197.7"	""	"404.6"	"364.7"	""	"1174"	"50"	"37.000"	"30.000"	"0.000563168170699853"	"16"	"0"	"2.264E-06"	"1.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWMSGk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"752.08545"	"2254.24179"	"2254.24183"	"-0.02"	"-0.00001"	"14/158"	"14"	"158"	"5339324.47772217"	"HCD"	"MS2"	"12.49022"	"249.1"	"100.000"	"54.6626"	"16776"	"16776"	"16757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"362.0"	""	"369.0"	""	"357.9"	""	"361.5"	""	"475.4"	"439.7"	""	"1155"	"33"	"37.000"	"30.000"	"0.0295496260024528"	"24"	"0"	"4.073E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQELIYAGMPITEVFK"	"[R].gQELIYAGMPITEVFk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"1127.62756"	"2254.24785"	"2254.25575"	"-3.50"	"-0.00395"	"4/168"	"4"	"168"	"67557.3184204102"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"79.7753"	"27005"	"27005"	"26975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.2"	""	"2.2"	""	"3.8"	""	"5.1"	""	"9.1"	"8.4"	""	"1118"	"11"	"37.000"	"30.000"	"4.11539767499557"	"17"	"0.003197"	"0.06703"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQELIYAGMPITEVFK"	"[R].gQELIYAGMPITEVFk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"752.08960"	"2254.25425"	"2254.25575"	"-0.67"	"-0.00050"	"15/168"	"15"	"168"	"2196445.10791016"	"HCD"	"MS2"	"15.85875"	"61.4"	"100.000"	"79.7499"	"26994"	"26994"	"26975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.5"	""	"66.9"	""	"82.4"	""	"93.9"	""	"137.2"	"135.8"	""	"1069"	"37"	"37.000"	"30.000"	"0.0113749032007776"	"15"	"0"	"5.931E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQELIYAGMPITEVFK"	"[R].gQELIYAGMPITEVFk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.08978"	"2254.25479"	"2254.25575"	"-0.42"	"-0.00032"	"13/168"	"13"	"168"	"1735900.31634521"	"HCD"	"MS2"	"3.921"	"46.0"	"100.000"	"79.7691"	"26951"	"26951"	"26929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.0"	""	"43.0"	""	"56.9"	""	"61.9"	""	"102.9"	"115.0"	""	"1069"	"39"	"37.000"	"30.000"	"0.00638186641836155"	"15"	"0"	"5.039E-06"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPWNVAFLAYETK"	"[R].kPWNVAFLAYETk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.11078"	"2254.31778"	"2254.32029"	"-1.11"	"-0.00083"	"7/122"	"7"	"122"	"2364378.12188721"	"HCD"	"MS2"	"16.29095"	"107.6"	"100.000"	"62.9352"	"20151"	"20151"	"20131"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.8"	""	"161.2"	""	"133.5"	""	"215.7"	""	"183.1"	"147.0"	""	"581"	"34"	"34.000"	"27.000"	"0.0118071787122494"	"15"	"0"	"9.479E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKGPFTDVVTTNLK"	"[K].fkGPFTDVVTTNLk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.11859"	"2254.34122"	"2254.34142"	"-0.09"	"-0.00007"	"7/138"	"7"	"138"	"2153414.2833252"	"HCD"	"MS2"	"49.80814"	"137.3"	"100.000"	"57.4589"	"17920"	"17920"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.5"	""	"183.0"	""	"202.4"	""	"208.1"	"2.1"	"257.7"	"256.0"	""	"432"	"10"	"33.000"	"26.000"	"2.03448152848934"	"13"	"0.0001889"	"0.000439"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKGPFTDVVTTNLK"	"[K].fkGPFTDVVTTNLk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"1"	"3"	"3"	"0.8654"	"0.0000"	"1"	"1"	"1"	"752.11914"	"2254.34287"	"2254.34142"	"0.64"	"0.00048"	"8/138"	"8"	"138"	"1991237.35998535"	"HCD"	"MS2"	"16.274"	"127.8"	"100.000"	"57.1376"	"17735"	"17735"	"17707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.4"	""	"185.7"	""	"195.7"	""	"213.3"	"0.5"	"223.6"	"221.8"	""	"414"	"52"	"33.000"	"26.000"	"0.000130909253234877"	"23"	"0"	"1.755E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQATWAELSWPHEK"	"[K].sGAQATWAELSWPHEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.73090"	"2256.17813"	"2256.18134"	"-1.42"	"-0.00107"	"12/172"	"12"	"172"	"12796890.8839722"	"HCD"	"MS2"	"6.229312"	"246.1"	"72.530"	"50.7114"	"15178"	"15178"	"15162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"508.3"	""	"382.0"	""	"301.2"	""	"368.0"	"5.3"	"400.6"	"358.8"	""	"1312"	"43"	"38.000"	"31.000"	"0.00308250535245022"	"15"	"0"	"2.5E-06"	"1.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQATWAELSWPHEK"	"[K].sGAQATWAELSWPHEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.73187"	"2256.18106"	"2256.18134"	"-0.12"	"-0.00009"	"13/172"	"13"	"172"	"3033049.21569824"	"HCD"	"MS2"	"29.57455"	"100.2"	"100.000"	"51.0303"	"15309"	"15309"	"15286"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.3"	""	"124.1"	""	"121.4"	""	"174.2"	"1.7"	"182.4"	"168.3"	""	"1313"	"43"	"38.000"	"31.000"	"0.00295961166531469"	"15"	"0"	"2.072E-06"	"1.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQATWAELSWPHEK"	"[K].sGAQATWAELSWPHEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.73199"	"2256.18143"	"2256.18134"	"0.04"	"0.00003"	"13/172"	"13"	"172"	"12499657.8646851"	"HCD"	"MS2"	"0"	"301.2"	"100.000"	"50.5474"	"15061"	"15061"	"15042"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"591.9"	""	"449.0"	""	"332.6"	""	"483.1"	"2.6"	"535.2"	"453.4"	""	"1305"	"44"	"38.000"	"31.000"	"0.00281566197630117"	"15"	"0"	"8.475E-07"	"1.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQATWAELSWPHEK"	"[K].sGAQATWAELSWPHEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.73236"	"2256.18253"	"2256.18134"	"0.53"	"0.00040"	"12/172"	"12"	"172"	"2324077.91241455"	"HCD"	"MS2"	"4.043574"	"80.0"	"100.000"	"50.8575"	"15188"	"15188"	"15170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.2"	""	"109.8"	""	"96.8"	""	"134.6"	"1.9"	"147.8"	"130.6"	""	"1316"	"48"	"38.000"	"31.000"	"0.000975496900026038"	"16"	"0"	"1.415E-06"	"1.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLDVNHFAPEELTVKTK"	"[R].vSLDVNHFAPEELTVKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"4"	"4"	"0.0714"	"0.0000"	"1"	"1"	"1"	"564.82074"	"2256.26113"	"2256.24371"	"7.72"	"0.00435"	"8/190"	"8"	"190"	"5489501.29089355"	"HCD"	"MS2"	"0"	"108.1"	"100.000"	"59.0321"	"18558"	"18558"	"18533"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.5"	"3.3"	"145.3"	""	"139.7"	""	"178.7"	"1.9"	"204.7"	"205.2"	""	"1001"	"28"	"36.000"	"30.000"	"0.0721778733438196"	""	"0.0001889"	"0.0006929"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLDVNHFAPEELTVKTK"	"[R].vSLDVNHFAPEELTVKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"3"	"3"	"0.1111"	"0.0000"	"1"	"1"	"1"	"752.75903"	"2256.26255"	"2256.24371"	"8.35"	"0.00628"	"17/190"	"17"	"190"	"8778840.1895752"	"HCD"	"MS2"	"2.565022"	"213.4"	"100.000"	"58.9807"	"18537"	"18537"	"18517"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.5"	""	"274.9"	""	"264.7"	""	"373.0"	""	"435.8"	"387.9"	""	"1004"	"45"	"37.000"	"30.000"	"0.00170884911229902"	""	"0.0001889"	"0.0007882"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLDVNHFAPEELTVKTK"	"[R].vSLDVNHFAPEELTVKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"4"	"4"	"0.0750"	"0.0000"	"1"	"1"	"1"	"564.82135"	"2256.26357"	"2256.24371"	"8.80"	"0.00496"	"6/190"	"6"	"190"	"5745391.80993652"	"HCD"	"MS2"	"21.03651"	"103.1"	"100.000"	"58.9359"	"18466"	"18466"	"18441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.9"	""	"132.6"	""	"129.1"	""	"172.0"	"0.5"	"209.5"	"187.4"	""	"998"	"40"	"36.000"	"29.000"	"0.00534688133313565"	""	"0.0001859"	"0.0003418"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLDVNHFAPEELTVKTK"	"[R].vSLDVNHFAPEELTVKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"752.75964"	"2256.26438"	"2256.24371"	"9.16"	"0.00689"	"15/190"	"15"	"190"	"7392582.68530273"	"HCD"	"MS2"	"13.10454"	"189.8"	"80.542"	"59.1223"	"18541"	"18541"	"18521"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.2"	""	"240.6"	""	"261.7"	""	"292.1"	"5.7"	"368.6"	"377.6"	""	"979"	"30"	"36.000"	"29.000"	"0.0466393722289577"	""	"0.0003839"	"0.001651"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLDVNHFAPEELTVKTK"	"[R].vSLDVNHFAPEELTVKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"3"	"3"	"0.1111"	"0.0000"	"1"	"1"	"1"	"752.76044"	"2256.26676"	"2256.24371"	"10.21"	"0.00768"	"17/190"	"17"	"190"	"4624437.00793457"	"HCD"	"MS2"	"10.65425"	"141.7"	"100.000"	"58.8083"	"18418"	"18418"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"185.9"	""	"170.3"	""	"194.0"	""	"244.8"	""	"291.0"	"260.4"	""	"978"	"45"	"36.000"	"29.000"	"0.00169945182945727"	""	"0.0001889"	"0.0005132"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHLVEIPPNLPSSLVELR"	"[K].nHLVEIPPNLPSSLVELR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.76782"	"2256.28891"	"2256.29133"	"-1.07"	"-0.00081"	"14/192"	"14"	"192"	"1961913.17681885"	"HCD"	"MS2"	"24.69971"	"76.6"	"100.000"	"64.3081"	"20712"	"20712"	"20691"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.0"	""	"88.6"	""	"89.2"	""	"138.0"	"1.8"	"149.5"	"169.1"	""	"773"	"20"	"35.000"	"28.000"	"0.358219726736119"	"14"	"0"	"0.0001232"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHLVEIPPNLPSSLVELR"	"[K].nHLVEIPPNLPSSLVELR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"P47853"	"Biglycan OS=Rattus norvegicus OX=10116 GN=Bgn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.76935"	"2256.29349"	"2256.29133"	"0.96"	"0.00072"	"14/192"	"14"	"192"	"650751.288757324"	"HCD"	"MS2"	"48.43355"	"29.2"	"100.000"	"64.9847"	"20936"	"20936"	"20905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.0"	""	"35.6"	""	"37.4"	""	"52.2"	""	"54.7"	"59.7"	""	"756"	"25"	"35.000"	"28.000"	"0.112587921032423"	"14"	"0"	"4.19E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISAFLVPMPTPGLTLGK"	"[K].gISAFLVPMPTPGLTLGk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"753.11725"	"2257.33719"	"2257.33942"	"-0.99"	"-0.00074"	"15/160"	"15"	"160"	"290095.188354492"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"88.2803"	"30391"	"30391"	"30381"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.7"	""	"15.9"	""	"18.7"	""	"18.5"	""	"16.0"	"16.7"	""	"481"	"40"	"33.000"	"26.000"	"0.00244407810635402"	"16"	"0"	"2.677E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISAFLVPMPTPGLTLGK"	"[K].gISAFLVPMPTPGLTLGk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1129.17407"	"2257.34087"	"2257.33942"	"0.64"	"0.00073"	"3/160"	"3"	"160"	"74207.1820678711"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"88.2381"	"30375"	"30375"	"30359"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"3.9"	""	"2.6"	""	""	""	"3.3"	"3.6"	""	"475"	"4"	"33.000"	"26.000"	"10.1780273594392"	"13"	"0.003507"	"0.07987"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATENDIYNFFSPLNPMR"	"[R].aTENDIYNFFSPLNPMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"753.37500"	"2258.11045"	"2258.11132"	"-0.39"	"-0.00029"	"17/172"	"17"	"172"	"705362.420410156"	"HCD"	"MS2"	"7.35356"	"11.2"	"100.000"	"82.3402"	"28050"	"28050"	"28030"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.8"	""	"16.9"	""	"15.3"	""	"16.6"	""	"22.1"	"20.6"	""	"1058"	"46"	"37.000"	"30.000"	"0.00144695715621625"	"15"	"0"	"6.354E-06"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATENDIYNFFSPLNPMR"	"[R].aTENDIYNFFSPLNPMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"753.37512"	"2258.11081"	"2258.11132"	"-0.22"	"-0.00017"	"14/172"	"14"	"172"	"744797.571228027"	"HCD"	"MS2"	"44.4332"	"16.4"	"100.000"	"82.2434"	"27960"	"27960"	"27936"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.5"	""	"17.5"	""	"24.7"	""	"32.3"	""	"31.3"	"30.9"	""	"1059"	"55"	"37.000"	"30.000"	"0.00016590747910251"	"16"	"0"	"8.239E-06"	"1.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGFLRPVTIFGPIADVAR"	"[R].eAGFLRPVTIFGPIADVAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"753.43195"	"2258.28128"	"2258.28585"	"-2.02"	"-0.00152"	"17/200"	"17"	"200"	"1770744.19952393"	"HCD"	"MS2"	"1.510642"	"57.2"	"100.000"	"72.4314"	"24019"	"24019"	"23999"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.5"	""	"68.3"	""	"74.7"	""	"88.3"	"1.4"	"103.8"	"110.9"	""	"891"	"38"	"36.000"	"29.000"	"0.00674291536178331"	"15"	"0"	"2.178E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGFLRPVTIFGPIADVAR"	"[R].eAGFLRPVTIFGPIADVAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"753.43256"	"2258.28312"	"2258.28585"	"-1.21"	"-0.00091"	"19/200"	"19"	"200"	"3462072.2144165"	"HCD"	"MS2"	"33.86164"	"94.7"	"100.000"	"72.2066"	"23876"	"23876"	"23857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"130.6"	""	"125.2"	""	"132.1"	""	"158.1"	"0.4"	"177.1"	"174.1"	""	"880"	"39"	"36.000"	"29.000"	"0.00504025694236036"	"21"	"0"	"5.375E-07"	"1.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGFLRPVTIFGPIADVAR"	"[R].eAGFLRPVTIFGPIADVAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"753.43262"	"2258.28330"	"2258.28585"	"-1.13"	"-0.00085"	"20/200"	"20"	"200"	"2907633.13287354"	"HCD"	"MS2"	"23.03669"	"81.8"	"100.000"	"72.1200"	"23892"	"23892"	"23871"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.1"	""	"118.8"	""	"110.3"	""	"135.3"	"1.0"	"136.1"	"156.0"	""	"880"	"45"	"36.000"	"29.000"	"0.00135036967489211"	"15"	"0"	"6.311E-07"	"1.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGFLRPVTIFGPIADVAR"	"[R].eAGFLRPVTIFGPIADVAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"753.43292"	"2258.28421"	"2258.28585"	"-0.73"	"-0.00055"	"11/200"	"11"	"200"	"1428740.65356445"	"HCD"	"MS2"	"10.83336"	"60.4"	"100.000"	"72.5230"	"24005"	"24005"	"23985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.5"	""	"82.8"	""	"78.9"	""	"103.8"	"0.8"	"102.8"	"119.1"	""	"871"	"20"	"36.000"	"29.000"	"0.454975655470658"	"14"	"0"	"5.001E-06"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSGVFSSDFQEFVNK"	"[K].lPSGVFSSDFQEFVNk.[C]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P36506"	"Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"P36506"	"Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"753.74109"	"2259.20871"	"2259.20615"	"1.13"	"0.00085"	"10/148"	"10"	"148"	"439874.108398438"	"HCD"	"MS2"	"13.24514"	"23.1"	"100.000"	"78.9084"	"26600"	"26600"	"26577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.5"	""	"30.9"	""	"33.7"	""	"38.8"	"1.2"	"47.1"	"41.9"	""	"1358"	"21"	"38.000"	"31.000"	"0.495301649462852"	"17"	"0.001058"	"0.01401"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLLGEEVAQYDGAYK"	"[K].vFLLGEEVAQYDGAYk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.07721"	"2260.21708"	"2260.22656"	"-4.19"	"-0.00316"	"7/144"	"7"	"144"	"204268.166809082"	"HCD"	"MS2"	"11.9217"	"12.7"	"100.000"	"78.1208"	"26330"	"26330"	"26303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.0"	""	"17.7"	""	"16.5"	""	"21.5"	""	"23.7"	"27.2"	""	"1338"	"6"	"38.000"	"31.000"	"17.1169395833988"	"13"	"0.0006037"	"0.004487"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLLGEEVAQYDGAYK"	"[K].vFLLGEEVAQYDGAYk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"754.07928"	"2260.22330"	"2260.22656"	"-1.44"	"-0.00109"	"12/144"	"12"	"144"	"368787.191040039"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"78.0204"	"26238"	"26238"	"26215"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.1"	""	"17.7"	""	"19.9"	""	"32.0"	""	"33.4"	"35.0"	""	"1329"	"41"	"38.000"	"31.000"	"0.0049260065534446"	"17"	"0"	"7.302E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLLGEEVAQYDGAYK"	"[K].vFLLGEEVAQYDGAYk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"754.07953"	"2260.22403"	"2260.22656"	"-1.12"	"-0.00084"	"13/144"	"13"	"144"	"1196681.93493652"	"HCD"	"MS2"	"4.449482"	"36.5"	"100.000"	"77.6838"	"26151"	"26151"	"26133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.9"	""	"44.6"	""	"48.4"	""	"55.5"	""	"82.6"	"69.8"	""	"1338"	"50"	"38.000"	"31.000"	"0.000673637286461857"	"19"	"0"	"1.117E-05"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFLLGEEVAQYDGAYK"	"[K].vFLLGEEVAQYDGAYk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"0.7818"	"0.0000"	"1"	"1"	"1"	"754.08044"	"2260.22678"	"2260.22656"	"0.10"	"0.00007"	"13/144"	"13"	"144"	"1024919.4263916"	"HCD"	"MS2"	"4.077836"	"36.4"	"100.000"	"77.6735"	"26096"	"26096"	"26073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.2"	""	"42.9"	""	"46.2"	""	"58.1"	""	"71.4"	"77.7"	""	"1316"	"55"	"38.000"	"31.000"	"0.000192409226462091"	"28"	"0"	"1.736E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFAHLAEPLDPAQPGK"	"[K].nPFAHLAEPLDPAQPGk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.08716"	"2260.24692"	"2260.24902"	"-0.93"	"-0.00070"	"17/166"	"17"	"166"	"3063839.4553833"	"HCD"	"MS2"	"15.56194"	"126.1"	"100.000"	"51.5547"	"15524"	"15524"	"15494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.5"	""	"165.4"	""	"167.3"	""	"193.4"	"1.2"	"242.0"	"233.8"	""	"1231"	"35"	"37.000"	"30.000"	"0.0182906044253475"	"15"	"0"	"6.566E-06"	"1.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFAHLAEPLDPAQPGK"	"[K].nPFAHLAEPLDPAQPGk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.08801"	"2260.24948"	"2260.24902"	"0.20"	"0.00015"	"17/166"	"17"	"166"	"3906847.55773926"	"HCD"	"MS2"	"24.92268"	"165.1"	"100.000"	"51.4308"	"15423"	"15423"	"15394"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.4"	""	"215.0"	""	"215.9"	""	"276.1"	"3.2"	"307.8"	"309.2"	""	"1219"	"25"	"37.000"	"30.000"	"0.187488100858446"	"14"	"0"	"1.132E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQDEWDAVMLHSFTLR"	"[K].aLQDEWDAVMLHSFTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"754.39038"	"2261.15659"	"2261.15860"	"-0.89"	"-0.00067"	"9/178"	"9"	"178"	"172101.513549805"	"HCD"	"MS2"	"28.73902"	"9.5"	"100.000"	"80.4793"	"27292"	"27292"	"27263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.3"	""	"16.0"	""	"14.1"	""	"16.7"	""	"16.4"	"14.6"	""	"1348"	"21"	"38.000"	"31.000"	"0.539088287874738"	"16"	"0.0001889"	"0.0006473"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQDEWDAVMLHSFTLR"	"[K].aLQDEWDAVMLHSFTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"754.39148"	"2261.15989"	"2261.15860"	"0.57"	"0.00043"	"12/178"	"12"	"178"	"310451.167541504"	"HCD"	"MS2"	"45.54559"	"11.6"	"100.000"	"80.4153"	"27215"	"27215"	"27185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.6"	""	"17.0"	""	"16.2"	""	"16.0"	""	"21.3"	"20.4"	""	"1351"	"23"	"38.000"	"31.000"	"0.341684559183104"	"16"	"0"	"0.0001407"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFRPGTENTPMIAGLGK"	"[R].nFRPGTENTPMIAGLGk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"754.41986"	"2261.24503"	"2261.24764"	"-1.16"	"-0.00087"	"6/166"	"6"	"166"	"2103268.18066406"	"HCD"	"MS2"	"0"	"110.7"	"100.000"	"44.8184"	"12732"	"12732"	"12704"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"192.5"	""	"175.8"	""	"184.4"	""	"142.5"	"1.0"	"172.7"	"176.8"	""	"1190"	"26"	"37.000"	"30.000"	"0.157949030937545"	"16"	"0"	"2.526E-06"	"1.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFRPGTENTPMIAGLGK"	"[R].nFRPGTENTPMIAGLGk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.42017"	"2261.24594"	"2261.24764"	"-0.75"	"-0.00057"	"6/166"	"6"	"166"	"1892553.92718506"	"HCD"	"MS2"	"0"	"98.2"	"100.000"	"45.0435"	"12873"	"12873"	"12843"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"170.5"	""	"160.3"	""	"163.9"	""	"135.0"	""	"146.2"	"152.0"	""	"1195"	"19"	"37.000"	"30.000"	"0.757421989850063"	"14"	"0"	"1.406E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THLPLSLLPQSLLDQK"	"[K].tHLPLSLLPQSLLDQk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.5957"	"0.0000"	"1"	"1"	"1"	"754.45935"	"2261.36350"	"2261.36332"	"0.08"	"0.00006"	"15/158"	"15"	"158"	"2090582.90155029"	"HCD"	"MS2"	"0"	"70.2"	"100.000"	"70.0253"	"22985"	"22985"	"22966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.5"	""	"97.8"	""	"95.7"	""	"124.5"	""	"141.4"	"113.5"	""	"393"	"47"	"32.000"	"25.000"	"0.00037270271351799"	"16"	"0"	"3.955E-06"	"1.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THLPLSLLPQSLLDQK"	"[K].tHLPLSLLPQSLLDQk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.5800"	"0.0000"	"1"	"1"	"1"	"754.46045"	"2261.36679"	"2261.36332"	"1.53"	"0.00116"	"16/158"	"16"	"158"	"1774583.36450195"	"HCD"	"MS2"	"0"	"54.6"	"100.000"	"69.8232"	"22955"	"22955"	"22929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.8"	""	"73.9"	""	"76.4"	""	"84.4"	""	"113.0"	"96.8"	""	"392"	"50"	"32.000"	"25.000"	"0.000179579216063912"	"16"	"0"	"4.622E-06"	"1.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIRPMDIEAIEASVMK"	"[R].tIRPMDIEAIEASVMk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.75763"	"2262.25833"	"2262.26018"	"-0.82"	"-0.00062"	"9/170"	"9"	"170"	"1650434.3338623"	"HCD"	"MS2"	"1.918591"	"81.2"	"100.000"	"69.6103"	"22816"	"22816"	"22794"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"124.2"	""	"93.3"	""	"97.9"	""	"101.4"	""	"169.4"	"186.4"	""	"1067"	"21"	"37.000"	"30.000"	"0.410331089892906"	"14"	"0"	"1.037E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIRPMDIEAIEASVMK"	"[R].tIRPMDIEAIEASVMk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.75861"	"2262.26126"	"2262.26018"	"0.48"	"0.00036"	"17/170"	"17"	"170"	"1612070.63848877"	"HCD"	"MS2"	"2.574601"	"75.2"	"100.000"	"69.4105"	"22786"	"22786"	"22762"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"116.3"	""	"82.4"	""	"90.4"	""	"98.5"	""	"154.9"	"178.1"	""	"1044"	"23"	"37.000"	"30.000"	"0.264040473565625"	"14"	"0"	"1.157E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSNVIEVYHNYSGIK"	"[K].aLSNVIEVYHNYSGIk.[G]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"3"	"3"	"0.8254"	"0.0000"	"1"	"1"	"1"	"755.75983"	"2265.26493"	"2265.26434"	"0.26"	"0.00020"	"19/164"	"19"	"164"	"7326028.87316895"	"HCD"	"MS2"	"7.577644"	"224.8"	"100.000"	"59.2977"	"18666"	"18666"	"18645"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.0"	""	"198.7"	""	"184.2"	""	"636.9"	"3.3"	"435.0"	"488.1"	""	"1161"	"63"	"37.000"	"30.000"	"3.16812438363483E-05"	"27"	"0"	"9.449E-07"	"1.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSNVIEVYHNYSGIK"	"[K].aLSNVIEVYHNYSGIk.[G]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"755.76019"	"2265.26603"	"2265.26434"	"0.74"	"0.00056"	"18/164"	"18"	"164"	"6195156.76922607"	"HCD"	"MS2"	"0"	"202.2"	"100.000"	"59.1561"	"18555"	"18555"	"18537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.6"	""	"174.1"	""	"162.6"	""	"567.5"	""	"390.5"	"457.2"	""	"1145"	"59"	"37.000"	"30.000"	"7.37522868344319E-05"	"24"	"0"	"1.373E-06"	"1.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILGDQDSFQWDDLAK"	"[R].gILGDQDSFQWDDLAk.[M]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.06287"	"2266.17405"	"2266.17558"	"-0.68"	"-0.00051"	"14/156"	"14"	"156"	"1589029.48693848"	"HCD"	"MS2"	"6.997752"	"76.7"	"100.000"	"73.4504"	"24435"	"24435"	"24415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.1"	""	"113.7"	""	"119.3"	""	"104.0"	""	"126.5"	"142.7"	""	"1358"	"57"	"38.000"	"31.000"	"0.000123842518187503"	"16"	"0"	"3.637E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILGDQDSFQWDDLAK"	"[R].gILGDQDSFQWDDLAk.[M]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"3"	"3"	"0.9808"	"0.0000"	"1"	"1"	"1"	"756.06348"	"2266.17588"	"2266.17558"	"0.13"	"0.00010"	"14/156"	"14"	"156"	"1987556.50378418"	"HCD"	"MS2"	"19.88513"	"90.0"	"100.000"	"73.4660"	"24390"	"24390"	"24369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.1"	""	"136.1"	""	"139.4"	""	"132.5"	""	"157.6"	"157.0"	""	"1362"	"52"	"38.000"	"31.000"	"0.00038828186942319"	"17"	"0"	"1.261E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILFDTFVNDVAPVEK"	"[R].tILFDTFVNDVAPVEk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"756.09528"	"2266.27127"	"2266.27351"	"-0.98"	"-0.00074"	"11/162"	"11"	"162"	"236730.732910156"	"HCD"	"MS2"	"50.08367"	"9.0"	"100.000"	"83.4050"	"28485"	"28485"	"28461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.2"	""	"8.3"	""	"16.1"	""	"18.4"	""	"16.0"	"15.1"	""	"1056"	"41"	"37.000"	"30.000"	"0.00405166866383041"	"26"	"0"	"2.263E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILFDTFVNDVAPVEK"	"[R].tILFDTFVNDVAPVEk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"0"	"3"	"3"	"0.7708"	"0.0000"	"1"	"1"	"1"	"756.09650"	"2266.27494"	"2266.27351"	"0.63"	"0.00048"	"12/162"	"12"	"162"	"323062.891723633"	"HCD"	"MS2"	"16.58794"	"11.4"	"100.000"	"83.3320"	"28404"	"28404"	"28382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.7"	""	"13.0"	""	"14.2"	""	"21.4"	""	"22.7"	"20.3"	""	"1021"	"48"	"37.000"	"30.000"	"0.000755084832159871"	"26"	"0"	"1.702E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHLYFWTLEGNSLNK"	"[K].sHLYFWTLEGNSLNk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"756.41327"	"2267.22525"	"2267.22247"	"1.23"	"0.00093"	"9/142"	"9"	"142"	"511916.741394043"	"HCD"	"MS2"	"55.50434"	"39.1"	"100.000"	"58.8220"	"18424"	"18424"	"18393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.2"	""	"48.0"	""	"47.7"	""	"69.3"	""	"75.9"	"82.7"	""	"1304"	"9"	"38.000"	"31.000"	"8.05837726605821"	"21"	"0.0001889"	"0.0005158"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSQFIGYPITLYLEK"	"[K].hSQFIGYPITLYLEk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"756.43243"	"2267.28275"	"2267.28401"	"-0.56"	"-0.00042"	"17/160"	"17"	"160"	"2904220.56933594"	"HCD"	"MS2"	"0"	"79.6"	"100.000"	"66.4618"	"21591"	"21591"	"21571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"127.8"	""	"93.5"	""	"104.3"	""	"141.6"	""	"145.9"	"146.2"	""	"1003"	"47"	"37.000"	"30.000"	"0.00104056912900364"	"23"	"0"	"4.053E-06"	"1.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSQFIGYPITLYLEK"	"[K].hSQFIGYPITLYLEk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"756.43262"	"2267.28330"	"2267.28401"	"-0.31"	"-0.00024"	"14/160"	"14"	"160"	"2821411.52935791"	"HCD"	"MS2"	"0"	"81.1"	"100.000"	"66.7755"	"21719"	"21719"	"21699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.4"	""	"88.9"	""	"100.5"	""	"160.5"	"1.1"	"156.8"	"152.1"	""	"994"	"32"	"36.000"	"29.000"	"0.0298096164898988"	"17"	"0"	"2.09E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSQFIGYPITLYLEK"	"[K].hSQFIGYPITLYLEk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"756.43298"	"2267.28440"	"2267.28401"	"0.17"	"0.00013"	"14/160"	"14"	"160"	"1969550.31677246"	"HCD"	"MS2"	"0"	"58.7"	"100.000"	"66.5499"	"21575"	"21575"	"21545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.9"	""	"70.5"	""	"81.1"	""	"113.5"	"1.7"	"107.4"	"93.9"	""	"993"	"38"	"36.000"	"29.000"	"0.00744593520826928"	"18"	"0"	"1.482E-05"	"1.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSQFIGYPITLYLEK"	"[K].hSQFIGYPITLYLEk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"756.43347"	"2267.28586"	"2267.28401"	"0.82"	"0.00062"	"12/160"	"12"	"160"	"3842159.32928467"	"HCD"	"MS2"	"0.7472503"	"100.1"	"100.000"	"66.8357"	"21691"	"21691"	"21673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"151.5"	""	"110.9"	""	"119.6"	""	"199.8"	"3.6"	"187.8"	"175.4"	""	"978"	"39"	"36.000"	"29.000"	"0.00631406224797018"	"18"	"0"	"1.675E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHLYFWTLEGNSLNK"	"[K].sHLYFWTLEGnSLNk.[K]"	"N-Term(TMT6plex); N11(Deamidated); K15(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"0.3182"	"0.0000"	"1"	"1"	"1"	"756.74634"	"2268.22446"	"2268.20649"	"7.92"	"0.00599"	"9/142"	"9"	"142"	"779885.706604004"	"HCD"	"MS2"	"34.97647"	"39.8"	"100.000"	"58.8455"	"18483"	"18483"	"18453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.0"	""	"55.2"	""	"51.6"	""	"73.2"	""	"72.2"	"79.9"	""	"1380"	"22"	"38.000"	"31.000"	"0.400727448089705"	"14"	"0.0001859"	"0.0003256"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDFLFSSDHLIEMATK"	"[K].gDFLFSSDHLIEMATk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"757.06848"	"2269.19089"	"2269.19388"	"-1.32"	"-0.00099"	"10/146"	"10"	"146"	"1217985.91473389"	"HCD"	"MS2"	"57.58154"	"48.5"	"100.000"	"70.8646"	"23328"	"23328"	"23299"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.6"	""	"49.0"	""	"58.1"	""	"79.6"	"1.5"	"107.6"	"111.4"	""	"1419"	"29"	"38.000"	"31.000"	"0.0954887921202695"	"21"	"0"	"1.26E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDFLFSSDHLIEMATK"	"[K].gDFLFSSDHLIEMATk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"757.06964"	"2269.19437"	"2269.19388"	"0.22"	"0.00016"	"10/146"	"10"	"146"	"1278621.29852295"	"HCD"	"MS2"	"12.18342"	"46.7"	"100.000"	"70.7735"	"23342"	"23342"	"23322"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.6"	""	"48.1"	""	"59.6"	""	"64.5"	""	"109.4"	"109.9"	""	"1400"	"25"	"38.000"	"31.000"	"0.203750198264662"	"20"	"0"	"2.513E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLKHLDNLK"	"[K].vINAFNDGLKHLDNLk.[G]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.6667"	"0.0000"	"1"	"1"	"1"	"568.08130"	"2269.30337"	"2269.30687"	"-1.55"	"-0.00088"	"13/158"	"13"	"158"	"4395375.33325195"	"HCD"	"MS2"	"14.63916"	"87.5"	"100.000"	"57.6341"	"17991"	"17991"	"17973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"114.8"	""	"96.4"	""	"117.1"	""	"169.7"	""	"172.6"	"160.5"	""	"775"	"33"	"35.000"	"28.000"	"0.0214423167321098"	"17"	"0"	"0.0001403"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1135.16235"	"2269.31743"	"2269.32079"	"-1.48"	"-0.00168"	"8/166"	"8"	"166"	"65139.7963256836"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"97.4524"	"33451"	"33451"	"33446"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.0"	""	"4.4"	""	"3.8"	""	"6.4"	""	"4.1"	"5.5"	""	"657"	"21"	"35.000"	"28.000"	"0.268247308991298"	"14"	"0.0003839"	"0.00205"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1135.16309"	"2269.31890"	"2269.32079"	"-0.84"	"-0.00095"	"6/166"	"6"	"166"	"68290.7047119141"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"97.6302"	"33507"	"33507"	"33500"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	"2.8"	""	"4.1"	""	"6.9"	"6.7"	""	"649"	"6"	"35.000"	"28.000"	"8.51558917328252"	"13"	"0.00103"	"0.0126"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"568.08521"	"2269.31899"	"2269.32079"	"-0.79"	"-0.00045"	"9/166"	"9"	"166"	"264409.288391113"	"HCD"	"MS2"	"25.10479"	"6.2"	"100.000"	"97.4741"	"33460"	"33460"	"33453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.6"	""	"7.7"	""	"9.5"	""	"11.7"	""	"10.2"	"12.2"	""	"665"	"17"	"35.000"	"28.000"	"0.623435673932417"	"14"	"0.0001889"	"0.0007323"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"568.08521"	"2269.31899"	"2269.32079"	"-0.79"	"-0.00045"	"7/166"	"7"	"166"	"251652.644775391"	"HCD"	"MS2"	"20.61852"	"5.2"	"100.000"	"97.8378"	"33565"	"33565"	"33561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"6.4"	""	"6.8"	""	"9.9"	""	"11.1"	"9.5"	""	"665"	"17"	"35.000"	"28.000"	"0.691499148461979"	"14"	"0.0001889"	"0.001021"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"4"	"4"	"0.7222"	"0.0000"	"1"	"1"	"1"	"568.08521"	"2269.31899"	"2269.32079"	"-0.79"	"-0.00045"	"12/166"	"12"	"166"	"345168.823730469"	"HCD"	"MS2"	"22.65179"	"6.0"	"100.000"	"97.3163"	"33408"	"33408"	"33405"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	"6.7"	""	"10.0"	""	"10.7"	""	"13.9"	"10.7"	""	"665"	"18"	"35.000"	"28.000"	"0.488417987316586"	"19"	"0"	"9.749E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"757.11127"	"2269.31925"	"2269.32079"	"-0.68"	"-0.00051"	"15/166"	"15"	"166"	"2438193.98596191"	"HCD"	"MS2"	"2.274705"	"47.7"	"100.000"	"97.7099"	"33533"	"33533"	"33530"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.0"	""	"55.2"	""	"59.6"	""	"86.7"	""	"95.3"	"99.4"	""	"659"	"50"	"35.000"	"28.000"	"0.000364632536820641"	""	"0"	"3.21E-06"	"1.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"4"	"4"	"0.8571"	"0.0000"	"1"	"1"	"1"	"568.08533"	"2269.31948"	"2269.32079"	"-0.58"	"-0.00033"	"7/166"	"7"	"166"	"247989.279296875"	"HCD"	"MS2"	"15.29896"	"5.6"	"100.000"	"97.9827"	"33610"	"33610"	"33607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"7.1"	""	"7.5"	""	"8.3"	""	"11.7"	"11.8"	""	"657"	"14"	"35.000"	"28.000"	"1.29579223731729"	"15"	"0.0001889"	"0.0009888"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"757.11139"	"2269.31961"	"2269.32079"	"-0.52"	"-0.00039"	"9/166"	"9"	"166"	"636080.360656738"	"HCD"	"MS2"	"8.564316"	"14.1"	"100.000"	"97.8041"	"33557"	"33557"	"33554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.8"	""	"17.3"	""	"15.6"	""	"25.5"	""	"28.6"	"31.2"	""	"657"	"24"	"35.000"	"28.000"	"0.122612676835894"	"17"	"0.0001308"	"0.0002274"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"568.08539"	"2269.31972"	"2269.32079"	"-0.47"	"-0.00027"	"15/166"	"15"	"166"	"881343.264099121"	"HCD"	"MS2"	"2.406193"	"15.4"	"100.000"	"97.5745"	"33490"	"33490"	"33488"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.6"	""	"18.4"	""	"19.9"	""	"26.3"	""	"31.0"	"35.3"	""	"657"	"34"	"35.000"	"28.000"	"0.0142736608640361"	"17"	"0"	"1.542E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"4"	"4"	"0.8158"	"0.0000"	"1"	"1"	"1"	"568.08545"	"2269.31997"	"2269.32079"	"-0.36"	"-0.00021"	"11/166"	"11"	"166"	"781452.157775879"	"HCD"	"MS2"	"3.198723"	"14.4"	"100.000"	"97.7284"	"33538"	"33538"	"33535"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.8"	""	"15.9"	""	"23.8"	""	"24.6"	""	"27.3"	"29.8"	""	"657"	"38"	"35.000"	"28.000"	"0.00580143424095405"	"22"	"0"	"1.392E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"757.11188"	"2269.32108"	"2269.32079"	"0.13"	"0.00010"	"13/166"	"13"	"166"	"548508.456970215"	"HCD"	"MS2"	"15.30503"	"15.5"	"100.000"	"97.2887"	"33401"	"33401"	"33398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.8"	""	"16.6"	""	"17.4"	""	"28.1"	""	"35.1"	"29.8"	""	"635"	"31"	"35.000"	"28.000"	"0.0262267048990754"	"24"	"0"	"1.057E-05"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"757.11200"	"2269.32145"	"2269.32079"	"0.29"	"0.00022"	"14/166"	"14"	"166"	"506217.17199707"	"HCD"	"MS2"	"13.49555"	"10.8"	"100.000"	"97.4553"	"33454"	"33454"	"33451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.0"	""	"12.8"	""	"16.2"	""	"18.7"	""	"19.4"	"21.6"	""	"632"	"52"	"34.000"	"28.000"	"0.000184368652950503"	"28"	"0"	"2.874E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7843"	"0.0000"	"1"	"1"	"1"	"757.11200"	"2269.32145"	"2269.32079"	"0.29"	"0.00022"	"12/166"	"12"	"166"	"2547419.69543457"	"HCD"	"MS2"	"1.987501"	"51.6"	"100.000"	"97.5539"	"33485"	"33485"	"33479"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"71.2"	""	"55.7"	""	"63.0"	""	"99.8"	""	"105.2"	"97.8"	""	"632"	"51"	"34.000"	"28.000"	"0.00024137210761055"	"27"	"0"	"6.494E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAPAIIFIDELDAIAPK"	"[K].nAPAIIFIDELDAIAPk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"757.11206"	"2269.32163"	"2269.32079"	"0.37"	"0.00028"	"15/166"	"15"	"166"	"733420.893615723"	"HCD"	"MS2"	"8.923001"	"18.0"	"100.000"	"97.9652"	"33606"	"33606"	"33602"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.8"	""	"20.0"	""	"20.1"	""	"32.8"	""	"35.8"	"37.9"	""	"631"	"40"	"34.000"	"28.000"	"0.00321365582931074"	"24"	"0"	"4.625E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKVPPAINQFTQALDR"	"[R].lkVPPAINQFTQALDR.[Q]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.11835"	"2269.34049"	"2269.34326"	"-1.22"	"-0.00092"	"15/156"	"15"	"156"	"962477.097900391"	"HCD"	"MS2"	"7.184524"	"40.5"	"100.000"	"65.3499"	"21138"	"21138"	"21107"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.3"	""	"47.9"	""	"59.3"	""	"68.2"	""	"72.6"	"71.6"	""	"479"	"15"	"33.000"	"26.000"	"0.708443985739095"	"13"	"0.0001889"	"0.001039"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKVPPAINQFTQALDR"	"[R].lkVPPAINQFTQALDR.[Q]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"P62425"	"60S ribosomal protein L7a OS=Rattus norvegicus OX=10116 GN=Rpl7a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.11890"	"2269.34214"	"2269.34326"	"-0.49"	"-0.00037"	"17/156"	"17"	"156"	"903056.970825195"	"HCD"	"MS2"	"6.970188"	"42.9"	"100.000"	"65.4086"	"21109"	"21109"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.9"	""	"53.8"	""	"65.3"	""	"73.2"	""	"76.2"	"77.6"	""	"453"	"21"	"33.000"	"26.000"	"0.166750907582558"	"14"	"7.476E-05"	"0.0001984"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYHPEKDDGMLSK"	"[R].fYHPEkDDGmLSk.[L]"	"N-Term(TMT6plex); K6(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.40802"	"2270.20951"	"2270.20942"	"0.04"	"0.00003"	"9/124"	"9"	"124"	"377834.591186523"	"HCD"	"MS2"	"48.67057"	"29.6"	"100.000"	"34.6275"	"8573"	"8573"	"8547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.8"	""	"38.3"	""	"34.2"	""	"61.8"	""	"52.6"	"39.9"	""	"1289"	"9"	"38.000"	"31.000"	"8.79473831531562"	"13"	"0.002199"	"0.03277"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYHPEKDDGMLSK"	"[R].fYHPEkDDGmLSk.[L]"	"N-Term(TMT6plex); K6(TMT6plex); M10(Oxidation); K13(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.40863"	"2270.21134"	"2270.20942"	"0.85"	"0.00064"	"8/124"	"8"	"124"	"332125.993652344"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"34.7078"	"8649"	"8649"	"8618"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.4"	""	"38.4"	""	"39.5"	""	"58.2"	""	"37.0"	"34.6"	""	"1303"	"10"	"38.000"	"31.000"	"6.60563267807447"	"13"	"0.0009727"	"0.01044"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITIANQTNCPLYVTK"	"[R].sITIANQTNcPLYVTk.[V]"	"N-Term(TMT6plex); C10(Methylthio); K16(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"757.41351"	"2270.22599"	"2270.22888"	"-1.28"	"-0.00096"	"17/168"	"17"	"168"	"1594477.44506836"	"HCD"	"MS2"	"20.42949"	"66.0"	"100.000"	"64.0936"	"20625"	"20625"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.7"	""	"85.5"	""	"89.4"	""	"97.1"	"4.7"	"102.0"	"143.6"	""	"1300"	"46"	"38.000"	"31.000"	"0.00164783360982364"	"18"	"0"	"4.327E-06"	"1.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITIANQTNCPLYVTK"	"[R].sITIANQTNcPLYVTk.[V]"	"N-Term(TMT6plex); C10(Methylthio); K16(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9815"	"0.0000"	"1"	"1"	"1"	"757.41364"	"2270.22635"	"2270.22888"	"-1.11"	"-0.00084"	"15/168"	"15"	"168"	"1098719.93786621"	"HCD"	"MS2"	"16.73936"	"54.5"	"100.000"	"64.0631"	"20559"	"20559"	"20537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.2"	""	"74.5"	""	"79.5"	""	"81.8"	"0.2"	"88.4"	"117.3"	""	"1296"	"54"	"38.000"	"31.000"	"0.000279624361784392"	"17"	"0"	"1.894E-05"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWmSGk.[E]"	"N-Term(TMT6plex); M13(Oxidation); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.9818"	"0.0000"	"1"	"1"	"1"	"757.41547"	"2270.23185"	"2270.23674"	"-2.16"	"-0.00163"	"17/158"	"17"	"158"	"2848493.581604"	"HCD"	"MS2"	"0"	"92.9"	"100.000"	"46.3508"	"13354"	"13354"	"13336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.7"	""	"130.2"	""	"86.6"	""	"198.0"	""	"192.1"	"147.6"	""	"1268"	"55"	"38.000"	"31.000"	"0.000219325565541761"	"17"	"0"	"9.969E-06"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWmSGk.[E]"	"N-Term(TMT6plex); M13(Oxidation); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.9811"	"0.0000"	"1"	"1"	"1"	"757.41602"	"2270.23349"	"2270.23674"	"-1.43"	"-0.00108"	"16/158"	"16"	"158"	"2510641.87451172"	"HCD"	"MS2"	"0"	"83.5"	"100.000"	"46.6564"	"13527"	"13527"	"13506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.3"	""	"113.2"	""	"81.7"	""	"175.9"	""	"152.8"	"130.4"	""	"1264"	"53"	"38.000"	"31.000"	"0.000309540213840858"	"17"	"0"	"1.657E-05"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWmSGk.[E]"	"N-Term(TMT6plex); M13(Oxidation); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.9800"	"0.0000"	"1"	"1"	"1"	"757.41608"	"2270.23368"	"2270.23674"	"-1.35"	"-0.00102"	"18/158"	"18"	"158"	"7984572.5927124"	"HCD"	"MS2"	"0"	"213.1"	"100.000"	"46.3627"	"13407"	"13407"	"13388"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"361.0"	""	"293.9"	""	"207.6"	""	"464.4"	"0.2"	"371.2"	"318.1"	""	"1264"	"50"	"38.000"	"31.000"	"0.000652705208441203"	"17"	"0"	"7.172E-06"	"1.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWmSGk.[E]"	"N-Term(TMT6plex); M13(Oxidation); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"757.41626"	"2270.23423"	"2270.23674"	"-1.11"	"-0.00084"	"20/158"	"20"	"158"	"5885601.47967529"	"HCD"	"MS2"	"0"	"173.9"	"100.000"	"46.0576"	"13234"	"13234"	"13213"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"312.4"	""	"218.4"	""	"175.8"	""	"356.2"	"3.0"	"318.5"	"261.7"	""	"1268"	"61"	"38.000"	"31.000"	"5.21301840066443E-05"	"19"	"0"	"3.49E-06"	"1.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWmSGk.[E]"	"N-Term(TMT6plex); M13(Oxidation); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"4"	"4"	"0.9535"	"0.0000"	"1"	"1"	"1"	"568.31439"	"2270.23574"	"2270.23674"	"-0.44"	"-0.00025"	"14/158"	"14"	"158"	"5412439.9331665"	"HCD"	"MS2"	"31.92722"	"144.8"	"100.000"	"46.1378"	"13267"	"13267"	"13244"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"216.9"	""	"190.0"	""	"182.0"	""	"264.4"	"1.6"	"255.6"	"261.2"	""	"1268"	"43"	"38.000"	"31.000"	"0.00345214681902095"	"17"	"0"	"3.128E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWmSGk.[E]"	"N-Term(TMT6plex); M13(Oxidation); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"757.41766"	"2270.23844"	"2270.23674"	"0.75"	"0.00056"	"14/158"	"14"	"158"	"782323.236206055"	"HCD"	"MS2"	"41.93914"	"50.7"	"100.000"	"50.5942"	"15131"	"15131"	"15105"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.7"	""	"66.4"	""	"67.8"	""	"76.9"	""	"94.7"	"92.1"	""	"1237"	"46"	"37.000"	"30.000"	"0.00156797705796296"	"19"	"0"	"2.809E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSALPIQHQDWMSGK"	"[R].vVSALPIQHQDWmSGk.[E]"	"N-Term(TMT6plex); M13(Oxidation); K16(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"4"	"4"	"0.8182"	"0.0000"	"1"	"1"	"1"	"568.31683"	"2270.24550"	"2270.23674"	"3.86"	"0.00219"	"15/158"	"15"	"158"	"5409247.01708984"	"HCD"	"MS2"	"26.02646"	"139.1"	"100.000"	"46.3995"	"13422"	"13422"	"13404"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"205.3"	""	"176.9"	""	"170.7"	""	"274.1"	"2.7"	"261.7"	"225.6"	""	"1199"	"44"	"37.000"	"30.000"	"0.00261089368274498"	"24"	"0"	"6.175E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVDKETDEFFK"	"[K].lLVVDkETDEFFk.[K]"	"N-Term(TMT6plex); K6(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"1"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"757.44580"	"2270.32285"	"2270.32510"	"-0.99"	"-0.00075"	"12/120"	"12"	"120"	"1488596.52093506"	"HCD"	"MS2"	"0"	"127.0"	"100.000"	"64.9533"	"20976"	"20976"	"20947"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.8"	""	"126.3"	""	"130.4"	""	"279.8"	""	"291.1"	"263.8"	""	"632"	"11"	"34.000"	"28.000"	"2.27869963421796"	"14"	"0.0001308"	"0.0002444"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVVDKETDEFFK"	"[K].lLVVDkETDEFFk.[K]"	"N-Term(TMT6plex); K6(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.44696"	"2270.32633"	"2270.32510"	"0.54"	"0.00041"	"13/120"	"13"	"120"	"1330991.88830566"	"HCD"	"MS2"	"4.886971"	"114.7"	"100.000"	"65.0582"	"20966"	"20966"	"20937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.2"	""	"102.5"	""	"125.8"	""	"236.5"	""	"270.2"	"255.4"	""	"603"	"14"	"34.000"	"27.000"	"1.19477827328015"	"13"	"0.0001889"	"0.0004975"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMANIQPQMLVAGATSIAR"	"[K].vAMANIQPQMLVAGATSIAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9464"	"0.0000"	"1"	"1"	"1"	"757.75378"	"2271.24680"	"2271.25146"	"-2.05"	"-0.00155"	"18/184"	"18"	"184"	"875236.215454102"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"72.7972"	"24117"	"24117"	"24097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.2"	""	"20.3"	""	"17.1"	""	"26.5"	""	"28.9"	"30.7"	""	"1213"	"56"	"37.000"	"30.000"	"0.000142177477649153"	"19"	"0"	"3.98E-06"	"1.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMANIQPQMLVAGATSIAR"	"[K].vAMANIQPQMLVAGATSIAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"757.75433"	"2271.24845"	"2271.25146"	"-1.33"	"-0.00100"	"18/184"	"18"	"184"	"456630.159240723"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"72.8388"	"24186"	"24186"	"24159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.6"	""	"18.7"	""	"20.0"	""	"20.8"	""	"28.3"	"26.4"	""	"1194"	"46"	"37.000"	"30.000"	"0.00139950460274599"	"25"	"0"	"3.761E-05"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMANIQPQMLVAGATSIAR"	"[K].vAMANIQPQMLVAGATSIAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"757.75555"	"2271.25211"	"2271.25146"	"0.29"	"0.00022"	"18/184"	"18"	"184"	"2067870.47851563"	"HCD"	"MS2"	"1.566162"	"23.2"	"100.000"	"72.5189"	"24055"	"24055"	"24031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.8"	""	"24.0"	""	"27.8"	""	"37.5"	"0.7"	"45.5"	"55.2"	""	"1173"	"60"	"37.000"	"30.000"	"6.25558625101546E-05"	"22"	"0"	"1.77E-06"	"1.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMANIQPQMLVAGATSIAR"	"[K].vAMANIQPQMLVAGATSIAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"757.75610"	"2271.25376"	"2271.25146"	"1.01"	"0.00077"	"17/184"	"17"	"184"	"1418731.46673584"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"72.5018"	"23997"	"23997"	"23969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.1"	""	"26.8"	""	"31.8"	""	"33.1"	""	"43.3"	"41.1"	""	"1156"	"62"	"37.000"	"30.000"	"3.42710837607239E-05"	"24"	"0"	"2.47E-06"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDFIQPVHYDLEVK"	"[R].lPDFIQPVHYDLEVk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"3"	"3"	"0.8197"	"0.0000"	"1"	"1"	"1"	"757.76428"	"2271.27829"	"2271.27893"	"-0.28"	"-0.00021"	"16/150"	"16"	"150"	"2765034.45281982"	"HCD"	"MS2"	"12.43167"	"93.5"	"100.000"	"69.0572"	"22590"	"22590"	"22570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.1"	""	"94.8"	""	"103.2"	""	"185.5"	""	"200.3"	"204.7"	""	"989"	"61"	"36.000"	"29.000"	"3.51695082501571E-05"	"27"	"0"	"9.997E-06"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDFIQPVHYDLEVK"	"[R].lPDFIQPVHYDLEVk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"3"	"3"	"0.7551"	"0.0000"	"1"	"1"	"1"	"757.76465"	"2271.27939"	"2271.27893"	"0.21"	"0.00016"	"14/150"	"14"	"150"	"2782198.61291504"	"HCD"	"MS2"	"12.73355"	"98.6"	"100.000"	"68.8529"	"22558"	"22558"	"22538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"124.1"	""	"108.5"	""	"119.9"	""	"184.4"	""	"196.4"	"204.1"	""	"972"	"49"	"36.000"	"29.000"	"0.000586997523861896"	"27"	"0"	"5.453E-05"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQDIENVALKPEK"	"[K].sIQDIENVALkPEk.[M]"	"N-Term(TMT6plex); K11(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63118"	"Calcitonin gene-related peptide type 1 receptor OS=Rattus norvegicus OX=10116 GN=Calcrl PE=2 SV=1"	"Q63118"	"Calcitonin gene-related peptide type 1 receptor OS=Rattus norvegicus OX=10116 GN=Calcrl PE=2 SV=1"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"757.78815"	"2271.34989"	"2271.35271"	"-1.24"	"-0.00094"	"9/150"	"9"	"150"	"1872529.22650146"	"HCD"	"MS2"	"40.75467"	"113.5"	"100.000"	"53.9286"	"16424"	"16424"	"16403"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"163.7"	""	"134.2"	""	"126.8"	""	"208.5"	"2.4"	"246.2"	"195.3"	""	"433"	"25"	"33.000"	"26.000"	"0.0622956756790272"	"17"	"0"	"4.229E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQDIENVALKPEK"	"[K].sIQDIENVALkPEk.[M]"	"N-Term(TMT6plex); K11(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63118"	"Calcitonin gene-related peptide type 1 receptor OS=Rattus norvegicus OX=10116 GN=Calcrl PE=2 SV=1"	"Q63118"	"Calcitonin gene-related peptide type 1 receptor OS=Rattus norvegicus OX=10116 GN=Calcrl PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.78845"	"2271.35080"	"2271.35271"	"-0.84"	"-0.00064"	"10/150"	"10"	"150"	"1924156.97735596"	"HCD"	"MS2"	"19.21411"	"112.4"	"100.000"	"54.1073"	"16550"	"16550"	"16529"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.5"	""	"124.7"	""	"133.2"	""	"201.0"	"0.2"	"257.1"	"199.5"	""	"432"	"11"	"33.000"	"26.000"	"1.71970419690141"	"13"	"0"	"0.0001048"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEWVAIQSVSAWPEK"	"[K].lAEWVAIQSVSAWPEk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"758.09564"	"2272.27237"	"2272.27417"	"-0.79"	"-0.00060"	"10/160"	"10"	"160"	"329387.287780762"	"HCD"	"MS2"	"4.72488"	"14.1"	"100.000"	"84.3565"	"28873"	"28873"	"28849"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"17.6"	""	"18.2"	""	"24.5"	""	"29.3"	"31.4"	""	"1025"	"26"	"37.000"	"30.000"	"0.130825941761389"	"22"	"0"	"4.666E-05"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEWVAIQSVSAWPEK"	"[K].lAEWVAIQSVSAWPEk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"758.09607"	"2272.27365"	"2272.27417"	"-0.23"	"-0.00017"	"12/160"	"12"	"160"	"325612.67388916"	"HCD"	"MS2"	"18.36492"	"12.2"	"100.000"	"84.2950"	"28797"	"28797"	"28772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.1"	""	"18.2"	""	"16.8"	""	"20.0"	""	"29.2"	"22.3"	""	"989"	"37"	"36.000"	"29.000"	"0.0100500054190796"	"22"	"0"	"1.836E-05"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFTALGSGQDAAVALLEDR"	"[R].lPFTALGSGQDAAVALLEDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"758.41467"	"2273.22947"	"2273.23388"	"-1.94"	"-0.00147"	"8/202"	"8"	"202"	"178858.880554199"	"HCD"	"MS2"	"17.29347"	"5.8"	"100.000"	"85.4223"	"29307"	"29307"	"29282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"6.2"	""	"4.7"	""	"11.2"	""	"12.0"	"12.8"	""	"1283"	"13"	"38.000"	"31.000"	"3.17831297401273"	"15"	"0.0001889"	"0.0006839"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFTALGSGQDAAVALLEDR"	"[R].lPFTALGSGQDAAVALLEDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"3"	"3"	"0.7843"	"0.0000"	"1"	"1"	"1"	"758.41553"	"2273.23203"	"2273.23388"	"-0.81"	"-0.00062"	"15/202"	"15"	"202"	"298489.269775391"	"HCD"	"MS2"	"10.88995"	"6.7"	"100.000"	"85.2895"	"29202"	"29202"	"29179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.9"	""	"7.8"	""	"9.6"	""	"11.1"	""	"12.5"	"14.6"	""	"1275"	"51"	"38.000"	"31.000"	"0.000513428756264406"	"26"	"0"	"1.524E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFTALGSGQDAAVALLEDR"	"[R].lPFTALGSGQDAAVALLEDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"758.41626"	"2273.23423"	"2273.23388"	"0.15"	"0.00012"	"21/202"	"21"	"202"	"1270262.5279541"	"HCD"	"MS2"	"9.431417"	"9.5"	"100.000"	"85.0946"	"29173"	"29173"	"29154"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.3"	""	"12.4"	""	"10.8"	""	"14.5"	""	"17.2"	"22.0"	""	"1243"	"100"	"37.000"	"30.000"	"6.40384973854464E-09"	"23"	"0"	"9.988E-08"	"1.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPFTALGSGQDAAVALLEDR"	"[R].lPFTALGSGQDAAVALLEDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"3"	"3"	"0.9052"	"0.0000"	"1"	"1"	"1"	"758.41638"	"2273.23459"	"2273.23388"	"0.31"	"0.00024"	"14/202"	"14"	"202"	"1124892.269104"	"HCD"	"MS2"	"18.56926"	"9.5"	"100.000"	"84.9777"	"29075"	"29075"	"29051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.8"	""	"10.2"	""	"13.4"	""	"12.6"	"1.7"	"15.9"	"21.9"	""	"1245"	"116"	"37.000"	"30.000"	"1.70662992202511E-10"	"30"	"0"	"3.052E-08"	"1.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISAFLVPMPTPGLTLGK"	"[K].gISAFLVPmPTPGLTLGk.[K]"	"N-Term(TMT6plex); M9(Oxidation); K18(TMT6plex)"	"1"	"1"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"0"	"3"	"3"	"0.9123"	"0.0000"	"1"	"1"	"1"	"758.44916"	"2273.33292"	"2273.33433"	"-0.62"	"-0.00047"	"15/160"	"15"	"160"	"429579.974853516"	"HCD"	"MS2"	"15.57926"	"15.3"	"100.000"	"78.8269"	"26618"	"26618"	"26591"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.1"	""	"15.7"	""	"22.5"	""	"33.4"	""	"31.7"	"23.3"	""	"626"	"57"	"34.000"	"27.000"	"6.6304703533278E-05"	"21"	"0"	"2.18E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISAFLVPMPTPGLTLGK"	"[K].gISAFLVPmPTPGLTLGk.[K]"	"N-Term(TMT6plex); M9(Oxidation); K18(TMT6plex)"	"1"	"1"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"P15651"	"Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acads PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"758.44934"	"2273.33347"	"2273.33433"	"-0.38"	"-0.00029"	"16/160"	"16"	"160"	"569761.829589844"	"HCD"	"MS2"	"11.76827"	"20.6"	"100.000"	"78.9822"	"26630"	"26630"	"26609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.6"	""	"25.4"	""	"33.4"	""	"39.2"	""	"35.8"	"39.2"	""	"624"	"31"	"34.000"	"27.000"	"0.0260108529601326"	"15"	"0"	"9.945E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFSPLHALNFGIGGDTTR"	"[R].eLFSPLHALNFGIGGDTTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O35264"	"Platelet-activating factor acetylhydrolase IB subunit beta OS=Rattus norvegicus OX=10116 GN=Pafah1b2 PE=1 SV=1"	"O35264"	"Platelet-activating factor acetylhydrolase IB subunit beta OS=Rattus norvegicus OX=10116 GN=Pafah1b2 PE=1 SV=1"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"758.74030"	"2274.20633"	"2274.20800"	"-0.73"	"-0.00055"	"12/196"	"12"	"196"	"2597046.06628418"	"HCD"	"MS2"	"4.542429"	"37.4"	"100.000"	"70.1365"	"23083"	"23083"	"23066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.7"	""	"39.7"	""	"48.2"	""	"62.7"	""	"69.5"	"78.1"	""	"1370"	"53"	"38.000"	"31.000"	"0.000330134241373212"	"18"	"0"	"8.892E-07"	"1.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFSPLHALNFGIGGDTTR"	"[R].eLFSPLHALNFGIGGDTTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O35264"	"Platelet-activating factor acetylhydrolase IB subunit beta OS=Rattus norvegicus OX=10116 GN=Pafah1b2 PE=1 SV=1"	"O35264"	"Platelet-activating factor acetylhydrolase IB subunit beta OS=Rattus norvegicus OX=10116 GN=Pafah1b2 PE=1 SV=1"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"758.74091"	"2274.20816"	"2274.20800"	"0.07"	"0.00006"	"16/196"	"16"	"196"	"2610019.28112793"	"HCD"	"MS2"	"2.544797"	"37.9"	"100.000"	"70.2857"	"23092"	"23092"	"23075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.4"	""	"47.0"	""	"54.1"	""	"62.8"	""	"77.7"	"76.2"	""	"1361"	"46"	"38.000"	"31.000"	"0.00171722866567303"	"22"	"0"	"3.609E-06"	"1.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQDPFPLYPGEVLEK"	"[R].lAQDPFPLYPGEVLEk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"1137.64148"	"2274.27568"	"2274.27859"	"-1.28"	"-0.00145"	"3/168"	"3"	"168"	"62335.2664794922"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"77.4693"	"26064"	"26064"	"26037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"4.1"	""	"4.3"	""	"3.9"	""	"6.7"	"5.1"	""	"1044"	"4"	"37.000"	"30.000"	"22.4734890676673"	"15"	"0.003197"	"0.06698"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQDPFPLYPGEVLEK"	"[R].lAQDPFPLYPGEVLEk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"758.76404"	"2274.27756"	"2274.27859"	"-0.45"	"-0.00034"	"16/168"	"16"	"168"	"1485943.82312012"	"HCD"	"MS2"	"4.530728"	"44.0"	"100.000"	"77.2575"	"25977"	"25977"	"25957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.3"	""	"58.3"	""	"57.0"	""	"73.3"	"0.5"	"92.6"	"76.4"	""	"1048"	"30"	"37.000"	"30.000"	"0.0557610941549541"	"15"	"0"	"9.23E-06"	"1.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPFFESLTLDLQPPK"	"[K].sPPFFESLTLDLQPPk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"758.76416"	"2274.27793"	"2274.27859"	"-0.29"	"-0.00022"	"7/146"	"7"	"146"	"237264.552856445"	"HCD"	"MS2"	"7.62499"	"10.3"	"100.000"	"83.6821"	"28547"	"28547"	"28524"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.4"	""	"14.4"	""	"14.3"	""	"19.1"	""	"15.8"	"23.2"	""	"1040"	"34"	"37.000"	"30.000"	"0.0202303475397026"	"16"	"0"	"0.0001047"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQDPFPLYPGEVLEK"	"[R].lAQDPFPLYPGEVLEk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"758.76434"	"2274.27848"	"2274.27859"	"-0.05"	"-0.00004"	"13/168"	"13"	"168"	"1099173.16546631"	"HCD"	"MS2"	"0"	"32.9"	"100.000"	"77.5779"	"26108"	"26108"	"26085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.9"	""	"50.0"	""	"46.0"	""	"51.4"	""	"66.9"	"56.7"	""	"1029"	"45"	"37.000"	"30.000"	"0.00178396109557827"	"19"	"0"	"1.046E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQDPFPLYPGEVLEK"	"[R].lAQDPFPLYPGEVLEk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"758.76434"	"2274.27848"	"2274.27859"	"-0.05"	"-0.00004"	"14/168"	"14"	"168"	"1927771.22381592"	"HCD"	"MS2"	"7.304905"	"57.0"	"100.000"	"77.3506"	"25964"	"25964"	"25945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.2"	""	"66.3"	""	"74.9"	""	"101.2"	""	"120.0"	"102.9"	""	"1029"	"34"	"37.000"	"30.000"	"0.0222528366067512"	"16"	"0"	"5.826E-06"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPFFESLTLDLQPPK"	"[K].sPPFFESLTLDLQPPk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"758.76569"	"2274.28250"	"2274.27859"	"1.72"	"0.00130"	"9/146"	"9"	"146"	"247052.781494141"	"HCD"	"MS2"	"11.50021"	"10.4"	"100.000"	"83.6837"	"28599"	"28599"	"28571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.2"	""	"14.3"	""	"13.2"	""	"19.7"	""	"19.6"	"18.8"	""	"1019"	"29"	"37.000"	"30.000"	"0.0653347431863243"	"17"	"0.0001889"	"0.000426"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDKR"	"[R].iINEPTAAAIAYGLDkR.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"758.77808"	"2274.31968"	"2274.32219"	"-1.10"	"-0.00084"	"14/178"	"14"	"178"	"8936663.96179199"	"HCD"	"MS2"	"2.334178"	"319.0"	"100.000"	"59.9241"	"18922"	"18922"	"18900"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"760.4"	""	"547.6"	""	"581.7"	""	"380.9"	""	"349.9"	"377.9"	""	"730"	"44"	"35.000"	"28.000"	"0.00133749714746459"	"15"	"0"	"2.237E-08"	"1.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDKR"	"[R].iINEPTAAAIAYGLDkR.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"1"	"3"	"3"	"0.9636"	"0.0000"	"1"	"1"	"1"	"758.77820"	"2274.32004"	"2274.32219"	"-0.94"	"-0.00072"	"11/178"	"11"	"178"	"4819577.72277832"	"HCD"	"MS2"	"20.00375"	"169.7"	"100.000"	"60.2348"	"19049"	"19049"	"19027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"278.9"	""	"234.8"	""	"253.4"	""	"278.2"	"1.7"	"265.2"	"291.8"	""	"712"	"55"	"35.000"	"28.000"	"0.000111032469193744"	"17"	"0"	"6.647E-06"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDKR"	"[R].iINEPTAAAIAYGLDkR.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"758.77838"	"2274.32059"	"2274.32219"	"-0.70"	"-0.00053"	"13/178"	"13"	"178"	"11497026.6063232"	"HCD"	"MS2"	"3.930527"	"336.6"	"85.555"	"59.8278"	"18829"	"18829"	"18809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"788.6"	""	"587.7"	""	"604.9"	""	"407.4"	""	"369.8"	"410.8"	""	"711"	"49"	"35.000"	"28.000"	"0.000421540789973425"	"16"	"0"	"1.133E-07"	"1.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQSLGGQYGVQGFPTIK"	"[K].hQSLGGQYGVQGFPTIk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.08997"	"2275.25534"	"2275.25992"	"-2.01"	"-0.00153"	"15/182"	"15"	"182"	"4833277.63024902"	"HCD"	"MS2"	"12.79468"	"149.2"	"100.000"	"44.3713"	"12550"	"12550"	"12533"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"227.9"	""	"218.1"	""	"227.2"	""	"230.5"	"1.5"	"260.1"	"246.7"	""	"1218"	"58"	"37.000"	"30.000"	"0.000101769418411522"	"16"	"0"	"2.421E-06"	"1.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQSLGGQYGVQGFPTIK"	"[K].hQSLGGQYGVQGFPTIk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.9552"	"0.0000"	"1"	"1"	"1"	"759.09003"	"2275.25553"	"2275.25992"	"-1.93"	"-0.00146"	"13/182"	"13"	"182"	"4770931.33721924"	"HCD"	"MS2"	"62.58358"	"131.8"	"100.000"	"44.6626"	"12718"	"12718"	"12692"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.4"	""	"182.5"	""	"199.2"	""	"195.9"	"3.7"	"224.1"	"227.7"	""	"1213"	"67"	"37.000"	"30.000"	"1.19903208672784E-05"	"19"	"0"	"1.696E-07"	"1.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLSNNHPLGMAIFLK"	"[K].fDLSNNHPLGMAIFLk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.09399"	"2275.26743"	"2275.26732"	"0.05"	"0.00004"	"11/146"	"11"	"146"	"386263.548034668"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"74.5244"	"24874"	"24874"	"24847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.6"	""	"24.1"	""	"34.2"	""	"30.2"	""	"40.4"	"43.8"	""	"1184"	"34"	"37.000"	"30.000"	"0.0258417372686178"	"15"	"0"	"2.608E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLSNNHPLGMAIFLK"	"[K].fDLSNNHPLGMAIFLk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.09485"	"2275.26999"	"2275.26732"	"1.18"	"0.00089"	"16/146"	"16"	"146"	"716243.091247559"	"HCD"	"MS2"	"21.1437"	"28.0"	"100.000"	"74.4557"	"24794"	"24794"	"24769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.3"	""	"32.8"	""	"40.0"	""	"45.5"	""	"48.0"	"50.4"	""	"1146"	"51"	"37.000"	"30.000"	"0.000442745975259837"	"16"	"0"	"2.225E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLVDTPTGYIESLPK"	"[R].lDGLVDTPTGYIESLPk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"1138.64185"	"2276.27641"	"2276.27899"	"-1.13"	"-0.00129"	"5/152"	"5"	"152"	"111859.38079834"	"HCD"	"MS2"	"24.35851"	"6.6"	"100.000"	"75.0435"	"25086"	"25086"	"25055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"10.2"	""	"10.0"	""	"13.4"	""	"7.9"	"13.8"	""	"1072"	"16"	"37.000"	"30.000"	"1.34947483327875"	"18"	"0.000523"	"0.003144"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLVDTPTGYIESLPK"	"[R].lDGLVDTPTGYIESLPk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"0"	"4"	"4"	"0.9459"	"0.0000"	"1"	"1"	"1"	"569.82501"	"2276.27822"	"2276.27899"	"-0.34"	"-0.00019"	"10/152"	"10"	"152"	"1901573.01580811"	"HCD"	"MS2"	"6.846287"	"40.7"	"100.000"	"75.0667"	"25095"	"25095"	"25071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.8"	""	"51.8"	""	"62.4"	""	"68.7"	""	"82.6"	"77.1"	""	"1059"	"37"	"37.000"	"30.000"	"0.010206244415346"	"17"	"0"	"3.516E-05"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLVDTPTGYIESLPK"	"[R].lDGLVDTPTGYIESLPk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1138.64319"	"2276.27910"	"2276.27899"	"0.05"	"0.00006"	"5/152"	"5"	"152"	"100671.645446777"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"75.0924"	"25054"	"25054"	"25025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"7.9"	""	"7.3"	""	"12.0"	""	"10.8"	"7.7"	""	"1038"	"13"	"37.000"	"30.000"	"2.59517923653052"	"13"	"0.0007076"	"0.00679"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLVDTPTGYIESLPK"	"[R].lDGLVDTPTGYIESLPk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"0"	"4"	"4"	"0.8966"	"0.0000"	"1"	"1"	"1"	"569.82550"	"2276.28017"	"2276.27899"	"0.52"	"0.00030"	"7/152"	"7"	"152"	"1592505.25408936"	"HCD"	"MS2"	"9.138144"	"35.2"	"100.000"	"75.1202"	"25065"	"25065"	"25041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.4"	""	"45.0"	""	"56.0"	""	"57.6"	""	"71.4"	"66.3"	""	"1051"	"29"	"37.000"	"30.000"	"0.0625997675218386"	"17"	"0"	"4.717E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLVDTPTGYIESLPK"	"[R].lDGLVDTPTGYIESLPk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"Q9Z2G8"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.43207"	"2276.28165"	"2276.27899"	"1.17"	"0.00089"	"15/152"	"15"	"152"	"3566633.1496582"	"HCD"	"MS2"	"12.19439"	"96.8"	"100.000"	"75.0670"	"25043"	"25043"	"25025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.7"	""	"126.1"	""	"144.6"	""	"173.4"	""	"188.8"	"171.8"	""	"1039"	"46"	"37.000"	"30.000"	"0.0012178268695587"	"16"	"0"	"5.38E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLLEPFDKWDGK"	"[R].lQLLEPFDkWDGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.44525"	"2276.32120"	"2276.32577"	"-2.01"	"-0.00152"	"11/130"	"11"	"130"	"1778006.09057617"	"HCD"	"MS2"	"15.71133"	"117.6"	"100.000"	"72.1490"	"23853"	"23853"	"23825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.7"	""	"147.3"	""	"164.2"	""	"179.6"	"0.6"	"220.3"	"209.7"	""	"701"	"22"	"35.000"	"28.000"	"0.20402717782869"	"14"	"0.0001308"	"0.0002134"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLLEPFDKWDGK"	"[R].lQLLEPFDkWDGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.44543"	"2276.32175"	"2276.32577"	"-1.76"	"-0.00134"	"12/130"	"12"	"130"	"2338046.94940186"	"HCD"	"MS2"	"13.02763"	"138.8"	"100.000"	"72.1246"	"23894"	"23894"	"23871"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.1"	""	"172.3"	""	"201.6"	""	"205.6"	"1.1"	"263.2"	"258.4"	""	"695"	"13"	"35.000"	"28.000"	"1.59939159319521"	"13"	"0"	"0.0001184"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLANLNPESSLFIIASK"	"[K].tLANLNPESSLFIIASk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"759.44629"	"2276.32431"	"2276.32660"	"-1.01"	"-0.00076"	"17/184"	"17"	"184"	"3809157.8392334"	"HCD"	"MS2"	"1.008152"	"81.7"	"100.000"	"81.2387"	"27601"	"27601"	"27582"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.3"	""	"104.0"	""	"110.7"	""	"141.0"	""	"148.2"	"152.9"	""	"694"	"64"	"35.000"	"28.000"	"1.40387834419013E-05"	"18"	"0"	"1.803E-05"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLANLNPESSLFIIASK"	"[K].tLANLNPESSLFIIASk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.44672"	"2276.32560"	"2276.32660"	"-0.44"	"-0.00034"	"18/184"	"18"	"184"	"2762153.96569824"	"HCD"	"MS2"	"0.3535813"	"61.7"	"100.000"	"81.5460"	"27727"	"27727"	"27710"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.8"	""	"76.6"	""	"74.8"	""	"108.7"	""	"114.2"	"126.3"	""	"685"	"60"	"35.000"	"28.000"	"3.19639598022969E-05"	"16"	"0"	"2.708E-05"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLANLNPESSLFIIASK"	"[K].tLANLNPESSLFIIASk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"1138.66663"	"2276.32598"	"2276.32660"	"-0.28"	"-0.00031"	"9/184"	"9"	"184"	"186038.892333984"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"81.3429"	"27593"	"27593"	"27568"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.1"	""	"19.1"	""	"16.0"	""	"21.9"	""	"19.3"	"26.2"	""	"677"	"27"	"35.000"	"28.000"	"0.0669204223177865"	"17"	"0"	"0.0001699"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLANLNPESSLFIIASK"	"[K].tLANLNPESSLFIIASk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"1138.66675"	"2276.32622"	"2276.32660"	"-0.17"	"-0.00019"	"12/184"	"12"	"184"	"180701.933776855"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"81.2850"	"27620"	"27620"	"27598"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.1"	""	"12.2"	""	"15.5"	""	"21.3"	""	"19.2"	"20.7"	""	"677"	"36"	"35.000"	"28.000"	"0.00812004943088097"	"25"	"0"	"0.0001295"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLANLNPESSLFIIASK"	"[K].tLANLNPESSLFIIASk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.44720"	"2276.32706"	"2276.32660"	"0.20"	"0.00015"	"17/184"	"17"	"184"	"5048529.87030029"	"HCD"	"MS2"	"0.3873627"	"110.7"	"100.000"	"81.4793"	"27649"	"27649"	"27632"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"161.2"	""	"140.1"	""	"140.6"	""	"188.4"	""	"190.5"	"228.9"	""	"665"	"62"	"35.000"	"28.000"	"2.1271183279798E-05"	"16"	"0"	"3.637E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLANLNPESSLFIIASK"	"[K].tLANLNPESSLFIIASk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"4"	"4"	"0.9583"	"0.0000"	"1"	"1"	"1"	"569.83722"	"2276.32705"	"2276.32660"	"0.19"	"0.00011"	"9/184"	"9"	"184"	"703107.195800781"	"HCD"	"MS2"	"16.25704"	"20.2"	"100.000"	"81.3730"	"27605"	"27605"	"27584"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.5"	""	"26.9"	""	"26.4"	""	"29.0"	"1.6"	"38.8"	"42.8"	""	"665"	"24"	"35.000"	"28.000"	"0.147499874107201"	"15"	"0"	"0.0001541"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLANLNPESSLFIIASK"	"[K].tLANLNPESSLFIIASk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.83728"	"2276.32729"	"2276.32660"	"0.30"	"0.00017"	"9/184"	"9"	"184"	"675679.680603027"	"HCD"	"MS2"	"9.447982"	"18.5"	"100.000"	"81.4074"	"27670"	"27670"	"27646"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.7"	""	"21.6"	""	"32.0"	""	"31.8"	""	"29.9"	"37.9"	""	"667"	"24"	"35.000"	"28.000"	"0.141284929177522"	"14"	"0"	"0.0001785"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLANLNPESSLFIIASK"	"[K].tLANLNPESSLFIIASk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.44781"	"2276.32889"	"2276.32660"	"1.00"	"0.00076"	"11/184"	"11"	"184"	"279494.392456055"	"HCD"	"MS2"	"11.72615"	"13.4"	"100.000"	"81.8117"	"27784"	"27784"	"27760"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.9"	""	"18.7"	""	"17.8"	""	"21.0"	""	"23.8"	"27.6"	""	"667"	"25"	"35.000"	"28.000"	"0.0942097471634389"	"14"	"0.0001308"	"0.0002367"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLANLNPESSLFIIASK"	"[K].tLANLNPESSLFIIASk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.44794"	"2276.32926"	"2276.32660"	"1.17"	"0.00088"	"16/184"	"16"	"184"	"1958403.91986084"	"HCD"	"MS2"	"6.289582"	"45.8"	"100.000"	"81.1930"	"27532"	"27532"	"27504"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.7"	""	"51.7"	""	"65.8"	""	"81.2"	"1.0"	"82.2"	"85.2"	""	"658"	"57"	"35.000"	"28.000"	"6.76388006078783E-05"	"16"	"0"	"4.292E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSAENIPNLPPGGGLAGK"	"[R].iLSAENIPNLPPGGGLAGk.[R]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.45020"	"2276.33603"	"2276.33784"	"-0.79"	"-0.00060"	"18/174"	"18"	"174"	"984960.646362305"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"65.8452"	"21340"	"21340"	"21315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.2"	""	"45.7"	""	"49.5"	""	"50.5"	""	"63.5"	"69.0"	""	"579"	"55"	"34.000"	"27.000"	"8.8439966227589E-05"	"16"	"0"	"1.085E-05"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGVPEVLLGILPGAGGTQR"	"[K].tVLGVPEVLLGILPGAGGTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.45532"	"2276.35141"	"2276.35393"	"-1.11"	"-0.00084"	"6/198"	"6"	"198"	"199370.274536133"	"HCD"	"MS2"	"15.02305"	"2.0"	"100.000"	"95.2743"	"32837"	"32837"	"32831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1.9"	""	""	""	"4.7"	""	"1.7"	""	"6.7"	"3.9"	""	"480"	"14"	"33.000"	"26.000"	"0.895800378709729"	"13"	"0.0001889"	"0.0008784"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGVPEVLLGILPGAGGTQR"	"[K].tVLGVPEVLLGILPGAGGTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"759.45532"	"2276.35141"	"2276.35393"	"-1.11"	"-0.00084"	"17/198"	"17"	"198"	"340073.042663574"	"HCD"	"MS2"	"0"	"1.5"	"100.000"	"95.5352"	"32906"	"32906"	"32904"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.2"	""	""	""	"2.6"	""	"3.4"	""	"4.1"	"2.4"	""	"480"	"41"	"33.000"	"26.000"	"0.00209031261589459"	"16"	"0"	"1.876E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGVPEVLLGILPGAGGTQR"	"[K].tVLGVPEVLLGILPGAGGTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.45605"	"2276.35361"	"2276.35393"	"-0.14"	"-0.00011"	"5/198"	"5"	"198"	"190609.544616699"	"HCD"	"MS2"	"14.47633"	"2.3"	"100.000"	"95.1232"	"32771"	"32771"	"32768"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.8"	""	"2.5"	""	"1.6"	""	"5.5"	""	"4.9"	"3.6"	""	"447"	"21"	"33.000"	"26.000"	"0.186757274574684"	"14"	"0.0001889"	"0.0004545"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGVPEVLLGILPGAGGTQR"	"[K].tVLGVPEVLLGILPGAGGTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.45624"	"2276.35416"	"2276.35393"	"0.10"	"0.00008"	"15/198"	"15"	"198"	"486593.031433105"	"HCD"	"MS2"	"2.167724"	"1.2"	"100.000"	"95.3820"	"32842"	"32842"	"32839"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	"2.8"	""	"6.0"	"3.0"	""	"458"	"43"	"33.000"	"26.000"	"0.0012526665550272"	"15"	"0"	"2.383E-05"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAPQLAGLLSPGSVLLLSAR"	"[R].aLAPQLAGLLSPGSVLLLSAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"P18297"	"Sepiapterin reductase OS=Rattus norvegicus OX=10116 GN=Spr PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"759.46753"	"2276.38803"	"2276.39032"	"-1.00"	"-0.00076"	"6/208"	"6"	"208"	"142324.611572266"	"HCD"	"MS2"	"19.13968"	"1.6"	"100.000"	"97.1670"	"33367"	"33367"	"33362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"3.1"	""	"3.0"	""	"2.7"	""	"3.8"	"2.9"	""	"294"	"0"	"31.000"	"24.000"	"13.6558058856651"	"13"	"0.0004166"	"0.00231"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPSDYFGEIALLMNRPR"	"[R].lGPSDYFGEIALLMNRPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"760.07690"	"2278.21616"	"2278.22154"	"-2.36"	"-0.00179"	"5/152"	"5"	"152"	"228497.920654297"	"HCD"	"MS2"	"24.74805"	"11.0"	"100.000"	"80.7539"	"27404"	"27404"	"27374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.3"	""	"14.9"	""	"15.5"	""	"19.1"	""	"19.1"	"23.6"	""	"1328"	"9"	"38.000"	"31.000"	"8.263577022162"	"13"	"0.00103"	"0.01192"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILQDFTGVPAVVDFAAMR"	"[R].vILQDFTGVPAVVDFAAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"760.08594"	"2278.24326"	"2278.24669"	"-1.51"	"-0.00114"	"12/192"	"12"	"192"	"240197.234924316"	"HCD"	"MS2"	"16.9217"	"4.9"	"100.000"	"94.2793"	"32519"	"32519"	"32513"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.4"	""	"7.3"	""	"7.6"	""	"5.3"	""	"10.5"	"7.6"	""	"1287"	"31"	"38.000"	"31.000"	"0.0546447635685868"	"18"	"0"	"0.0001184"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILQDFTGVPAVVDFAAMR"	"[R].vILQDFTGVPAVVDFAAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"760.08624"	"2278.24417"	"2278.24669"	"-1.10"	"-0.00084"	"5/192"	"5"	"192"	"197397.826049805"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"94.0135"	"32420"	"32420"	"32415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"4.9"	""	"4.0"	""	"6.3"	""	"8.5"	"9.9"	""	"1280"	"12"	"38.000"	"31.000"	"4.01032873390294"	"14"	"0.0001889"	"0.0003911"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILQDFTGVPAVVDFAAMR"	"[R].vILQDFTGVPAVVDFAAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"760.08661"	"2278.24527"	"2278.24669"	"-0.62"	"-0.00047"	"15/192"	"15"	"192"	"230076.313232422"	"HCD"	"MS2"	"9.545602"	"3.9"	"100.000"	"94.1423"	"32450"	"32450"	"32442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"4.7"	""	"3.8"	""	"7.5"	""	"4.9"	"11.4"	""	"1263"	"50"	"38.000"	"31.000"	"0.000664313923319365"	"18"	"0"	"8.64E-06"	"1.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILQDFTGVPAVVDFAAMR"	"[R].vILQDFTGVPAVVDFAAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.08722"	"2278.24710"	"2278.24669"	"0.18"	"0.00014"	"7/192"	"7"	"192"	"250287.741516113"	"HCD"	"MS2"	"20.3003"	"4.2"	"100.000"	"93.8487"	"32341"	"32341"	"32337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.9"	""	"4.9"	""	"5.4"	""	"7.8"	""	"8.4"	"9.5"	""	"1245"	"11"	"37.000"	"30.000"	"4.53042928324173"	"14"	"0.0001859"	"0.0003488"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAGALTTLLDLGASPDYK"	"[R].nAGALTTLLDLGASPDYk.[D]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"4"	"4"	"0.8667"	"0.0000"	"1"	"1"	"1"	"570.32208"	"2278.26650"	"2278.26948"	"-1.31"	"-0.00075"	"8/190"	"8"	"190"	"501733.288696289"	"HCD"	"MS2"	"14.73716"	"17.0"	"100.000"	"77.7656"	"26134"	"26134"	"26105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.1"	""	"20.1"	""	"24.2"	""	"28.5"	""	"30.9"	"40.9"	""	"1143"	"15"	"37.000"	"30.000"	"1.87506460014148"	"16"	"0.0008731"	"0.009285"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAGALTTLLDLGASPDYK"	"[R].nAGALTTLLDLGASPDYk.[D]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"760.09412"	"2278.26780"	"2278.26948"	"-0.74"	"-0.00056"	"16/190"	"16"	"190"	"607512.329284668"	"HCD"	"MS2"	"33.02134"	"25.4"	"100.000"	"77.8515"	"26220"	"26220"	"26197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.6"	""	"31.6"	""	"33.2"	""	"36.8"	"0.1"	"49.5"	"55.0"	""	"1133"	"30"	"37.000"	"30.000"	"0.0506057556534912"	"20"	"0"	"0.0001806"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFLLDLAETSLAGVANK"	"[K].gTFLLDLAETSLAGVANk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"760.10590"	"2278.30313"	"2278.30587"	"-1.20"	"-0.00091"	"10/156"	"10"	"156"	"226340.148925781"	"HCD"	"MS2"	"7.602361"	"7.2"	"100.000"	"97.8416"	"33569"	"33569"	"33566"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"4.7"	""	"7.3"	""	"14.9"	""	"20.3"	"15.4"	""	"913"	"31"	"36.000"	"29.000"	"0.0400350874852069"	"24"	"0"	"9.446E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFLLDLAETSLAGVANK"	"[K].gTFLLDLAETSLAGVANk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"0.6571"	"0.0000"	"1"	"1"	"1"	"760.10626"	"2278.30423"	"2278.30587"	"-0.72"	"-0.00055"	"10/156"	"10"	"156"	"312623.770629883"	"HCD"	"MS2"	"30.42596"	"7.7"	"100.000"	"97.5827"	"33491"	"33491"	"33485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"8.2"	""	"10.3"	""	"13.1"	""	"17.6"	"16.7"	""	"907"	"35"	"36.000"	"29.000"	"0.0131697427379963"	"27"	"0"	"5.064E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFLLDLAETSLAGVANK"	"[K].gTFLLDLAETSLAGVANk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"0.3158"	"0.0000"	"1"	"1"	"1"	"760.10645"	"2278.30478"	"2278.30587"	"-0.48"	"-0.00036"	"9/156"	"9"	"156"	"192540.268737793"	"HCD"	"MS2"	"27.9394"	"7.7"	"100.000"	"97.3406"	"33416"	"33416"	"33412"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.9"	""	"6.6"	""	"9.1"	""	"17.3"	""	"11.5"	"19.9"	""	"905"	"19"	"36.000"	"29.000"	"0.552864346224605"	"27"	"0.0001889"	"0.001097"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFLLDLAETSLAGVANK"	"[K].gTFLLDLAETSLAGVANk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"760.10645"	"2278.30478"	"2278.30587"	"-0.48"	"-0.00036"	"13/156"	"13"	"156"	"510954.255615234"	"HCD"	"MS2"	"3.812331"	"14.6"	"100.000"	"97.6067"	"33500"	"33500"	"33495"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.3"	""	"14.4"	""	"11.0"	""	"33.2"	"0.8"	"30.3"	"33.1"	""	"905"	"39"	"36.000"	"29.000"	"0.00521937599164044"	"20"	"0"	"1.23E-05"	"1.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPSGIQPDLLISLTAPK"	"[K].gNPSGIQPDLLISLTAPk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.44958"	"2279.33420"	"2279.33750"	"-1.45"	"-0.00110"	"13/190"	"13"	"190"	"1010826.46826172"	"HCD"	"MS2"	"13.8853"	"32.7"	"100.000"	"74.0818"	"24693"	"24693"	"24671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.6"	""	"42.9"	""	"42.6"	""	"52.9"	""	"66.9"	"64.4"	""	"589"	"29"	"34.000"	"27.000"	"0.0384667326554827"	"14"	"0"	"0.0001448"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPSGIQPDLLISLTAPK"	"[K].gNPSGIQPDLLISLTAPk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.44977"	"2279.33475"	"2279.33750"	"-1.21"	"-0.00092"	"14/190"	"14"	"190"	"2485886.92358398"	"HCD"	"MS2"	"20.93853"	"58.6"	"100.000"	"73.7729"	"24567"	"24567"	"24543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.7"	""	"79.6"	""	"90.3"	""	"90.5"	"0.0"	"102.3"	"115.2"	""	"595"	"36"	"34.000"	"27.000"	"0.00815618316148546"	"15"	"0"	"2.893E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPSGIQPDLLISLTAPK"	"[K].gNPSGIQPDLLISLTAPk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.45044"	"2279.33677"	"2279.33750"	"-0.32"	"-0.00025"	"10/190"	"10"	"190"	"911906.052734375"	"HCD"	"MS2"	"17.76843"	"33.9"	"100.000"	"74.0981"	"24648"	"24648"	"24625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.3"	""	"46.3"	""	"47.1"	""	"53.5"	"0.4"	"64.1"	"70.3"	""	"582"	"27"	"34.000"	"27.000"	"0.0548141885041532"	"15"	"0.0001308"	"0.0002148"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPSGIQPDLLISLTAPK"	"[K].gNPSGIQPDLLISLTAPk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"760.45081"	"2279.33786"	"2279.33750"	"0.16"	"0.00012"	"16/190"	"16"	"190"	"2566026.98358154"	"HCD"	"MS2"	"21.11761"	"65.9"	"100.000"	"73.7890"	"24522"	"24522"	"24497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.8"	""	"94.1"	""	"89.6"	""	"108.8"	"0.4"	"123.7"	"111.5"	""	"562"	"39"	"34.000"	"27.000"	"0.0039147706162763"	"17"	"0"	"3.511E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLGEMWNNTAADDK"	"[K].kLGEMWNNTAADDk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"760.74677"	"2280.22574"	"2280.22613"	"-0.17"	"-0.00013"	"11/148"	"11"	"148"	"2273615.32452393"	"HCD"	"MS2"	"0"	"134.4"	"100.000"	"41.1094"	"11273"	"11273"	"11245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.2"	""	"195.8"	""	"199.8"	""	"172.6"	""	"263.5"	"268.4"	""	"1278"	"47"	"38.000"	"31.000"	"0.00120088344593729"	"19"	"0"	"8.628E-06"	"1.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLGEMWNNTAADDK"	"[K].kLGEMWNNTAADDk.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"760.74756"	"2280.22812"	"2280.22613"	"0.87"	"0.00066"	"15/148"	"15"	"148"	"1088341.12908936"	"HCD"	"MS2"	"0"	"81.4"	"100.000"	"40.9950"	"11182"	"11182"	"11157"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.8"	""	"117.8"	""	"131.0"	""	"115.1"	""	"154.8"	"142.5"	""	"1274"	"30"	"38.000"	"31.000"	"0.0654846381906563"	"17"	"0"	"2.19E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDVWSFGILQTELVTK"	"[K].sDVWSFGILQTELVTk.[G]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"761.09973"	"2281.28464"	"2281.28441"	"0.10"	"0.00008"	"12/160"	"12"	"160"	"149932.672302246"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"86.7353"	"29782"	"29782"	"29761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"9.4"	""	"10.6"	""	"13.1"	""	"16.3"	"15.3"	""	"982"	"34"	"36.000"	"29.000"	"0.0204212109752565"	"18"	"0.0001859"	"0.0003167"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDVWSFGILQTELVTK"	"[K].sDVWSFGILQTELVTk.[G]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"3"	"3"	"0.3500"	"0.0000"	"1"	"1"	"1"	"761.10022"	"2281.28611"	"2281.28441"	"0.75"	"0.00057"	"10/160"	"10"	"160"	"124971.145141602"	"HCD"	"MS2"	"9.079446"	"7.1"	"100.000"	"86.8375"	"29876"	"29876"	"29846"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"8.6"	""	"10.3"	""	"14.0"	""	"14.0"	"15.4"	""	"977"	"20"	"36.000"	"29.000"	"0.441432767913344"	"27"	"0.0001889"	"0.0004831"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSAAYLWVGTGASDAEK"	"[K].tPSAAYLWVGTGASDAEk.[T]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"1141.60596"	"2282.20464"	"2282.20688"	"-0.98"	"-0.00112"	"18/168"	"18"	"168"	"379563.671142578"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"57.4926"	"17880"	"17880"	"17851"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.5"	""	"23.3"	""	"31.8"	""	"48.0"	"0.8"	"48.6"	"44.2"	""	"1308"	"78"	"38.000"	"31.000"	"1.04370496229282E-06"	"25"	"0"	"5.47E-06"	"1.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSAAYLWVGTGASDAEK"	"[K].tPSAAYLWVGTGASDAEk.[T]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"761.40717"	"2282.20694"	"2282.20688"	"0.03"	"0.00002"	"18/168"	"18"	"168"	"5105076.29473877"	"HCD"	"MS2"	"4.073062"	"125.8"	"100.000"	"57.3751"	"17832"	"17832"	"17803"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.6"	""	"140.9"	""	"132.3"	""	"246.4"	""	"238.4"	"253.2"	""	"1304"	"62"	"38.000"	"31.000"	"4.14235767567337E-05"	"21"	"0"	"4.254E-06"	"1.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSAAYLWVGTGASDAEK"	"[K].tPSAAYLWVGTGASDAEk.[T]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.40723"	"2282.20713"	"2282.20688"	"0.11"	"0.00008"	"16/168"	"16"	"168"	"2576656.64678955"	"HCD"	"MS2"	"40.68381"	"113.9"	"100.000"	"57.6769"	"17955"	"17955"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.6"	""	"120.7"	""	"147.7"	""	"193.0"	""	"252.9"	"237.2"	""	"1294"	"43"	"38.000"	"31.000"	"0.00313981659604893"	"15"	"0"	"2.179E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSAAYLWVGTGASDAEK"	"[K].tPSAAYLWVGTGASDAEk.[T]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.9492"	"0.0000"	"1"	"1"	"1"	"761.40765"	"2282.20841"	"2282.20688"	"0.67"	"0.00051"	"18/168"	"18"	"168"	"6360057.16131592"	"HCD"	"MS2"	"1.95619"	"154.0"	"100.000"	"57.5788"	"17969"	"17969"	"17941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.3"	""	"165.6"	""	"185.1"	""	"280.4"	""	"285.3"	"310.4"	""	"1282"	"59"	"38.000"	"31.000"	"7.32585012600244E-05"	"19"	"0"	"1.735E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSAAYLWVGTGASDAEK"	"[K].tPSAAYLWVGTGASDAEk.[T]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"1141.60791"	"2282.20854"	"2282.20688"	"0.73"	"0.00083"	"18/168"	"18"	"168"	"418927.076171875"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"57.6940"	"18016"	"18016"	"17989"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.6"	""	"29.0"	""	"28.7"	""	"49.5"	""	"55.7"	"63.0"	""	"1280"	"62"	"38.000"	"31.000"	"3.75993185619057E-05"	"19"	"0"	"2.209E-05"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSEALDGVPILVLANK"	"[K].vVSSEALDGVPILVLANk.[Q]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63055"	"ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus OX=10116 GN=Arfrp1 PE=2 SV=1"	"Q63055"	"ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus OX=10116 GN=Arfrp1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.46216"	"2282.37192"	"2282.37355"	"-0.72"	"-0.00054"	"15/148"	"15"	"148"	"295356.134094238"	"HCD"	"MS2"	"9.645721"	"11.9"	"100.000"	"83.2233"	"28411"	"28411"	"28381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.0"	""	"14.9"	""	"15.0"	""	"25.5"	""	"19.6"	"20.7"	""	"366"	"55"	"32.000"	"25.000"	"5.84051427483439E-05"	"16"	"0"	"8.317E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIPCDFLIPVQTQHPIR"	"[K].mIPcDFLIPVQTQHPIR.[N]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.73792"	"2283.19919"	"2283.20134"	"-0.94"	"-0.00072"	"11/154"	"11"	"154"	"511900.165588379"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"77.9080"	"26192"	"26192"	"26169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.5"	""	"17.9"	""	"20.6"	""	"25.9"	""	"31.3"	"23.7"	""	"1306"	"27"	"38.000"	"31.000"	"0.134559133336531"	"14"	"0"	"0.0001183"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIPCDFLIPVQTQHPIR"	"[K].mIPcDFLIPVQTQHPIR.[N]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"761.73883"	"2283.20194"	"2283.20134"	"0.26"	"0.00020"	"8/154"	"8"	"154"	"965669.420227051"	"HCD"	"MS2"	"24.31243"	"17.6"	"100.000"	"77.5108"	"26081"	"26081"	"26053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.5"	""	"21.8"	""	"23.9"	""	"30.0"	""	"35.5"	"30.2"	""	"1267"	"27"	"38.000"	"31.000"	"0.115810148692643"	"18"	"7.476E-05"	"0.000197"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MIPCDFLIPVQTQHPIR"	"[K].mIPcDFLIPVQTQHPIR.[N]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"761.73920"	"2283.20304"	"2283.20134"	"0.74"	"0.00057"	"13/154"	"13"	"154"	"768420.128540039"	"HCD"	"MS2"	"60.86891"	"17.0"	"100.000"	"77.5304"	"26038"	"26038"	"26009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.2"	""	"24.9"	""	"23.7"	""	"27.9"	""	"33.0"	"29.5"	""	"1271"	"34"	"38.000"	"31.000"	"0.0254750799052151"	"19"	"0"	"0.000122"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"1142.15759"	"2283.30791"	"2283.31129"	"-1.48"	"-0.00169"	"9/176"	"9"	"176"	"333672.206054688"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"59.4708"	"18737"	"18737"	"18709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.6"	""	"15.3"	""	"25.2"	""	"27.7"	""	"32.5"	"34.5"	""	"815"	"37"	"36.000"	"29.000"	"0.00753576962233568"	"17"	"0.0001308"	"0.0002254"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.58282"	"2283.30947"	"2283.31129"	"-0.80"	"-0.00045"	"17/176"	"17"	"176"	"6635589.94317627"	"HCD"	"MS2"	"29.03629"	"121.1"	"100.000"	"59.1179"	"18593"	"18593"	"18565"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.2"	""	"166.8"	""	"166.0"	""	"189.3"	""	"216.1"	"213.6"	""	"810"	"40"	"36.000"	"29.000"	"0.00450251349549044"	"15"	"0"	"1.335E-05"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9808"	"0.0000"	"1"	"1"	"1"	"761.77496"	"2283.31034"	"2283.31129"	"-0.42"	"-0.00032"	"21/176"	"21"	"176"	"25149514.5587158"	"HCD"	"MS2"	"2.254873"	"209.8"	"37.847"	"59.0333"	"18506"	"18506"	"18489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.3"	""	"300.3"	""	"307.1"	""	"329.0"	""	"392.9"	"360.5"	""	"807"	"52"	"36.000"	"29.000"	"0.000248796083251108"	"17"	"0"	"6.706E-06"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9796"	"0.0000"	"1"	"1"	"1"	"761.77502"	"2283.31052"	"2283.31129"	"-0.34"	"-0.00026"	"19/176"	"19"	"176"	"2434720.48883057"	"HCD"	"MS2"	"0"	"71.3"	"100.000"	"58.7277"	"18385"	"18385"	"18361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.0"	""	"102.7"	""	"101.8"	""	"108.4"	"0.8"	"121.3"	"127.2"	""	"807"	"49"	"36.000"	"29.000"	"0.000530693219789568"	"16"	"0"	"9.768E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"761.77509"	"2283.31070"	"2283.31129"	"-0.26"	"-0.00020"	"20/176"	"20"	"176"	"8469446.9901123"	"HCD"	"MS2"	"6.426924"	"121.8"	"55.106"	"59.5260"	"18759"	"18759"	"18741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"178.5"	""	"152.0"	""	"183.1"	""	"201.0"	"3.4"	"208.3"	"227.0"	""	"804"	"41"	"36.000"	"29.000"	"0.00287227523082356"	"16"	"0"	"1.111E-05"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.77509"	"2283.31070"	"2283.31129"	"-0.26"	"-0.00020"	"22/176"	"22"	"176"	"31760107.7957764"	"HCD"	"MS2"	"1.886268"	"224.4"	"33.029"	"59.2078"	"18630"	"18630"	"18613"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"355.9"	""	"310.9"	""	"317.6"	""	"348.5"	""	"405.0"	"386.3"	""	"804"	"54"	"36.000"	"29.000"	"0.00014329335563735"	"16"	"0"	"4.937E-06"	"1.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.58319"	"2283.31093"	"2283.31129"	"-0.16"	"-0.00009"	"14/176"	"14"	"176"	"5609693.24584961"	"HCD"	"MS2"	"22.89423"	"108.6"	"100.000"	"58.9685"	"18479"	"18479"	"18457"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"160.9"	""	"156.8"	""	"161.9"	""	"155.5"	""	"202.5"	"193.5"	""	"804"	"34"	"36.000"	"29.000"	"0.0178741769522582"	"15"	"0"	"4.504E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.77521"	"2283.31107"	"2283.31129"	"-0.10"	"-0.00007"	"18/176"	"18"	"176"	"3656934.23266602"	"HCD"	"MS2"	"4.705224"	"97.7"	"100.000"	"58.9016"	"18505"	"18505"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.4"	""	"131.6"	""	"145.5"	""	"158.9"	""	"172.4"	"165.9"	""	"809"	"48"	"36.000"	"29.000"	"0.000696495838581839"	"16"	"0"	"2.476E-06"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"0.9783"	"0.0000"	"1"	"1"	"1"	"571.58331"	"2283.31142"	"2283.31129"	"0.06"	"0.00003"	"17/176"	"17"	"176"	"9285722.62017822"	"HCD"	"MS2"	"11.30207"	"176.8"	"97.398"	"59.2802"	"18605"	"18605"	"18585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.9"	""	"235.2"	""	"271.9"	""	"263.2"	"5.6"	"309.3"	"322.2"	""	"803"	"46"	"36.000"	"29.000"	"0.00102964034066186"	"17"	"0"	"6.837E-06"	"1.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"1142.15967"	"2283.31206"	"2283.31129"	"0.34"	"0.00039"	"11/176"	"11"	"176"	"271487.087524414"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"59.3398"	"18630"	"18630"	"18601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.1"	""	"16.4"	""	"20.9"	""	"15.9"	""	"27.6"	"27.5"	""	"794"	"33"	"35.000"	"28.000"	"0.0219174743394461"	"17"	"0.0001308"	"0.0002349"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"1142.15979"	"2283.31230"	"2283.31129"	"0.44"	"0.00051"	"15/176"	"15"	"176"	"583209.121337891"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"59.1593"	"18610"	"18610"	"18581"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.1"	""	"38.1"	""	"36.4"	""	"42.4"	""	"55.5"	"48.0"	""	"790"	"45"	"35.000"	"28.000"	"0.00122912795315688"	"19"	"0"	"3.723E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1142.15979"	"2283.31230"	"2283.31129"	"0.44"	"0.00051"	"14/176"	"14"	"176"	"658547.340942383"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"59.0285"	"18504"	"18504"	"18473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.3"	""	"49.1"	""	"48.4"	""	"42.4"	""	"59.0"	"58.7"	""	"790"	"38"	"35.000"	"28.000"	"0.00654029135570463"	"15"	"0"	"6.835E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGINYQPPTVVPGGDLAK"	"[K].vGINYQPPTVVPGGDLAk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"5"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"4"	"4"	"0.9750"	"0.0000"	"1"	"1"	"1"	"571.58374"	"2283.31313"	"2283.31129"	"0.81"	"0.00046"	"16/176"	"16"	"176"	"10133972.6503296"	"HCD"	"MS2"	"11.55299"	"179.7"	"100.000"	"59.4082"	"18711"	"18711"	"18693"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"282.1"	""	"248.5"	""	"275.6"	""	"251.0"	"8.2"	"313.0"	"322.9"	""	"783"	"40"	"35.000"	"28.000"	"0.00373879597427392"	"16"	"0"	"1.558E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFYLALPPTVYEAVTK"	"[R].lFYLALPPTVYEAVTk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"761.78363"	"2283.33634"	"2283.34046"	"-1.81"	"-0.00138"	"11/132"	"11"	"132"	"193936.942626953"	"HCD"	"MS2"	"52.40335"	"9.0"	"100.000"	"94.8926"	"32702"	"32702"	"32696"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.9"	""	"15.5"	""	"12.1"	""	"13.5"	""	"17.9"	"16.2"	""	"613"	"29"	"34.000"	"27.000"	"0.0357627147629185"	"19"	"0.0001859"	"0.000332"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFYLALPPTVYEAVTK"	"[R].lFYLALPPTVYEAVTk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"761.78424"	"2283.33817"	"2283.34046"	"-1.00"	"-0.00076"	"12/132"	"12"	"132"	"184825.784423828"	"HCD"	"MS2"	"60.47869"	"6.8"	"100.000"	"95.0235"	"32759"	"32759"	"32750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.5"	""	"11.7"	""	"9.6"	""	"10.5"	""	"9.2"	"15.2"	""	"599"	"30"	"34.000"	"27.000"	"0.0270643017379829"	"19"	"0"	"0.000117"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFYLALPPTVYEAVTK"	"[R].lFYLALPPTVYEAVTk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"761.78607"	"2283.34366"	"2283.34046"	"1.40"	"0.00107"	"7/132"	"7"	"132"	"127034.94543457"	"HCD"	"MS2"	"65.14556"	"4.8"	"100.000"	"95.2839"	"32840"	"32840"	"32834"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"5.6"	""	"5.0"	""	"11.8"	""	"8.0"	"9.1"	""	"537"	"29"	"34.000"	"27.000"	"0.0361363505064022"	"19"	"0.0001889"	"0.001055"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDEFVTGNLSFDQINK"	"[K].vDEFVTGNLSFDQINk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"762.07874"	"2284.22165"	"2284.22253"	"-0.39"	"-0.00029"	"15/156"	"15"	"156"	"640797.924987793"	"HCD"	"MS2"	"17.07513"	"32.7"	"100.000"	"70.7916"	"23350"	"23350"	"23322"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.0"	""	"41.4"	""	"45.3"	""	"56.4"	""	"56.9"	"60.0"	""	"1286"	"44"	"38.000"	"31.000"	"0.00238897152309482"	"15"	"0"	"7.728E-06"	"1.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDEFVTGNLSFDQINK"	"[K].vDEFVTGNLSFDQINk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"762.07922"	"2284.22312"	"2284.22253"	"0.26"	"0.00019"	"15/156"	"15"	"156"	"485076.009399414"	"HCD"	"MS2"	"26.45873"	"27.8"	"100.000"	"70.9775"	"23374"	"23374"	"23347"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.0"	""	"35.9"	""	"37.6"	""	"53.6"	""	"47.2"	"55.7"	""	"1282"	"31"	"38.000"	"31.000"	"0.0510338143617502"	"15"	"0"	"3.111E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMFGSLEPPNIPQALPK"	"[K].sMFGSLEPPNIPQALPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"762.09619"	"2284.27402"	"2284.27755"	"-1.54"	"-0.00117"	"8/154"	"8"	"154"	"723590.56854248"	"HCD"	"MS2"	"25.79686"	"41.2"	"100.000"	"71.9748"	"23833"	"23833"	"23807"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.2"	""	"61.6"	""	"46.4"	""	"76.9"	""	"73.2"	"75.4"	""	"1062"	"10"	"37.000"	"30.000"	"4.91014730361196"	"17"	"0.0001308"	"0.0002113"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLQEFTPLGTGGGLYHFR"	"[R].yLQEFTPLGTGGGLYHFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"762.40094"	"2285.18827"	"2285.19162"	"-1.47"	"-0.00112"	"11/178"	"11"	"178"	"2357377.5199585"	"HCD"	"MS2"	"58.96219"	"52.6"	"100.000"	"65.0468"	"20961"	"20961"	"20937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.8"	""	"77.0"	""	"76.7"	""	"82.0"	"0.4"	"98.5"	"95.2"	""	"1329"	"20"	"38.000"	"31.000"	"0.607428248956982"	"15"	"0"	"3.605E-05"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVAGGAWTYNTTSAVTVK"	"[K].tVAGGAWTYNTTSAVTVk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P61515"	"Putative 60S ribosomal protein L37a OS=Rattus norvegicus OX=10116 GN=Rpl37a-ps1 PE=5 SV=2"	"P61515"	"Putative 60S ribosomal protein L37a OS=Rattus norvegicus OX=10116 GN=Rpl37a-ps1 PE=5 SV=2"	"0"	"3"	"3"	"0.9663"	"0.0000"	"1"	"1"	"1"	"762.42334"	"2285.25547"	"2285.25417"	"0.57"	"0.00043"	"20/182"	"20"	"182"	"2584994.14263916"	"HCD"	"MS2"	"17.96522"	"87.5"	"100.000"	"50.2288"	"14932"	"14932"	"14918"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.9"	""	"140.6"	""	"124.9"	""	"172.0"	""	"137.3"	"150.0"	""	"1205"	"89"	"37.000"	"30.000"	"7.31066782405149E-08"	"21"	"0"	"9.993E-07"	"1.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVAGGAWTYNTTSAVTVK"	"[K].tVAGGAWTYNTTSAVTVk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P61515"	"Putative 60S ribosomal protein L37a OS=Rattus norvegicus OX=10116 GN=Rpl37a-ps1 PE=5 SV=2"	"P61515"	"Putative 60S ribosomal protein L37a OS=Rattus norvegicus OX=10116 GN=Rpl37a-ps1 PE=5 SV=2"	"0"	"3"	"3"	"0.8955"	"0.0000"	"1"	"1"	"1"	"762.42371"	"2285.25656"	"2285.25417"	"1.05"	"0.00080"	"20/182"	"20"	"182"	"3528989.71398926"	"HCD"	"MS2"	"0"	"105.2"	"100.000"	"50.5141"	"15098"	"15098"	"15076"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.9"	""	"150.6"	""	"159.2"	""	"198.0"	""	"211.1"	"166.2"	""	"1190"	"67"	"37.000"	"30.000"	"1.26916172332221E-05"	"24"	"0"	"2.936E-06"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLNPSLTPFTFVGYDQK"	"[K].TKLNPSLTPFTFVGYDQk.[K]"	"K18(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"1"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"762.42413"	"2285.25785"	"2285.23790"	"8.73"	"0.00665"	"14/198"	"14"	"198"	"608661.110778809"	"HCD"	"MS2"	"0"	"32.9"	"100.000"	"76.8946"	"25778"	"25778"	"25761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.0"	""	"47.7"	""	"49.1"	""	"60.6"	""	"49.7"	"58.8"	""	"1184"	"54"	"37.000"	"30.000"	"0.000215437701387306"	"18"	"0.0008125"	"0.007674"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLNPSLTPFTFVGYDQK"	"[K].TKLNPSLTPFTFVGYDQk.[K]"	"K18(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"1"	"3"	"3"	"0.1628"	"0.0000"	"1"	"1"	"1"	"762.42413"	"2285.25785"	"2285.23790"	"8.73"	"0.00665"	"15/198"	"15"	"198"	"2029098.48486328"	"HCD"	"MS2"	"0"	"60.7"	"100.000"	"76.6038"	"25665"	"25665"	"25649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.5"	""	"94.6"	""	"76.5"	""	"120.0"	"0.2"	"99.3"	"104.9"	""	"1184"	"43"	"37.000"	"30.000"	"0.0029061746268234"	"15"	"0.0008731"	"0.009246"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLNPSLTPFTFVGYDQK"	"[K].TKLNPSLTPFTFVGYDQk.[K]"	"K18(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"1"	"3"	"3"	"0.1379"	"0.0000"	"1"	"1"	"1"	"762.42456"	"2285.25913"	"2285.23790"	"9.29"	"0.00708"	"18/198"	"18"	"198"	"1959125.21478271"	"HCD"	"MS2"	"32.49032"	"60.6"	"100.000"	"76.5357"	"25689"	"25689"	"25663"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.8"	""	"94.9"	""	"70.4"	""	"127.5"	"1.0"	"93.5"	"116.6"	""	"1179"	"58"	"37.000"	"30.000"	"9.13027396848908E-05"	"16"	"0.0002277"	"0.001117"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIYAYGFEKPSAIQQR"	"[R].gIYAYGFEkPSAIQQR.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q3B8Q2; Q5RKI1"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1; Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"762.75867"	"2286.26145"	"2286.26467"	"-1.41"	"-0.00108"	"7/140"	"7"	"140"	"2453905.31390381"	"HCD"	"MS2"	"27.33317"	"164.0"	"100.000"	"45.9934"	"13208"	"13208"	"13181"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"314.2"	""	"230.2"	""	"218.5"	""	"234.6"	""	"287.4"	"267.3"	""	"1143"	"16"	"37.000"	"30.000"	"1.45216590122143"	"13"	"0"	"1.671E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMANIQPQMLVAGATSIAR"	"[K].vAMANIQPQmLVAGATSIAR.[R]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"763.08691"	"2287.24619"	"2287.24637"	"-0.08"	"-0.00006"	"20/184"	"20"	"184"	"1969810.4151001"	"HCD"	"MS2"	"41.19802"	"68.6"	"100.000"	"65.6763"	"21218"	"21218"	"21193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.5"	""	"93.6"	""	"94.7"	""	"125.4"	""	"136.4"	"125.4"	""	"1224"	"44"	"37.000"	"30.000"	"0.00220674129529245"	"22"	"0"	"1.5E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMANIQPQMLVAGATSIAR"	"[K].vAMANIQPQmLVAGATSIAR.[R]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"763.08691"	"2287.24619"	"2287.24637"	"-0.08"	"-0.00006"	"20/184"	"20"	"184"	"1937864.03295898"	"HCD"	"MS2"	"24.37819"	"63.9"	"100.000"	"65.5459"	"21218"	"21218"	"21187"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"86.0"	""	"87.5"	""	"93.2"	""	"104.5"	""	"123.7"	"114.8"	""	"1224"	"52"	"37.000"	"30.000"	"0.000408085742758737"	"19"	"0"	"1.069E-05"	"1.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYALPEDLVEVKPK"	"[R].vYALPEDLVEVkPk.[M]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.13263"	"2287.38333"	"2287.38803"	"-2.05"	"-0.00157"	"6/116"	"6"	"116"	"2047583.97967529"	"HCD"	"MS2"	"3.060163"	"125.2"	"100.000"	"62.7436"	"20073"	"20073"	"20051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"194.0"	""	"185.7"	""	"186.0"	""	"186.8"	"0.4"	"200.3"	"231.6"	""	"351"	"2"	"32.000"	"25.000"	"12.4244485159416"	"13"	"0.0008731"	"0.009518"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYALPEDLVEVKPK"	"[R].vYALPEDLVEVkPk.[M]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.13348"	"2287.38590"	"2287.38803"	"-0.93"	"-0.00071"	"15/116"	"15"	"116"	"3484853.25219727"	"HCD"	"MS2"	"1.158848"	"176.0"	"100.000"	"61.2076"	"19446"	"19446"	"19427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"238.5"	""	"249.7"	""	"261.5"	""	"249.1"	""	"325.2"	"348.7"	""	"340"	"27"	"32.000"	"25.000"	"0.0377093391366038"	"14"	"0"	"1.36E-06"	"1.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYALPEDLVEVKPK"	"[R].vYALPEDLVEVkPk.[M]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.13403"	"2287.38755"	"2287.38803"	"-0.21"	"-0.00016"	"16/116"	"16"	"116"	"4825729.12774658"	"HCD"	"MS2"	"10.95468"	"218.5"	"100.000"	"60.8669"	"19307"	"19307"	"19283"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"317.3"	""	"300.9"	""	"314.0"	""	"359.0"	""	"387.1"	"394.8"	""	"331"	"27"	"32.000"	"25.000"	"0.0334809674071254"	"14"	"0"	"7.868E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYALPEDLVEVKPK"	"[R].vYALPEDLVEVkPk.[M]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.13409"	"2287.38773"	"2287.38803"	"-0.13"	"-0.00010"	"19/116"	"19"	"116"	"5836467.96148682"	"HCD"	"MS2"	"22.26337"	"270.5"	"100.000"	"60.7493"	"19206"	"19206"	"19177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"424.6"	""	"366.3"	""	"398.1"	""	"398.1"	""	"485.2"	"490.4"	""	"331"	"51"	"32.000"	"25.000"	"0.000144809814800141"	"16"	"0"	"8.992E-07"	"1.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYALPEDLVEVKPK"	"[R].vYALPEDLVEVkPk.[M]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.60242"	"2287.38784"	"2287.38803"	"-0.08"	"-0.00005"	"9/116"	"9"	"116"	"13680929.5181274"	"HCD"	"MS2"	"9.664301"	"296.9"	"100.000"	"60.9705"	"19349"	"19349"	"19331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"441.2"	""	"427.2"	""	"433.2"	""	"443.2"	"3.1"	"527.6"	"535.3"	""	"330"	"33"	"32.000"	"25.000"	"0.00836534668653261"	"15"	"0"	"1.135E-05"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYALPEDLVEVKPK"	"[R].vYALPEDLVEVkPk.[M]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.13422"	"2287.38810"	"2287.38803"	"0.03"	"0.00002"	"7/116"	"7"	"116"	"2249172.38409424"	"HCD"	"MS2"	"4.647845"	"136.5"	"100.000"	"62.6161"	"19968"	"19968"	"19945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"205.7"	""	"202.8"	""	"183.8"	""	"208.7"	""	"229.4"	"264.0"	""	"330"	"5"	"32.000"	"25.000"	"4.86949522399953"	"13"	"0.0002277"	"0.001215"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYALPEDLVEVKPK"	"[R].vYALPEDLVEVkPk.[M]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.60309"	"2287.39052"	"2287.38803"	"1.09"	"0.00062"	"14/116"	"14"	"116"	"13337070.1546631"	"HCD"	"MS2"	"10.18504"	"197.1"	"66.099"	"60.9546"	"19290"	"19290"	"19273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.6"	""	"279.0"	""	"312.4"	""	"283.5"	""	"350.9"	"376.9"	""	"315"	"32"	"31.000"	"24.000"	"0.00964451866966518"	"15"	"0"	"2.484E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLGTDVAGGYSYSMLDAIR"	"[K].iGLGTDVAGGYSYSMLDAIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.9294"	"0.0000"	"1"	"1"	"1"	"763.39453"	"2288.16904"	"2288.17940"	"-4.53"	"-0.00345"	"22/176"	"22"	"176"	"632604.331420898"	"HCD"	"MS2"	"12.55989"	"14.2"	"100.000"	"75.7181"	"25309"	"25309"	"25281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.1"	""	"22.4"	""	"22.7"	""	"19.1"	""	"30.3"	"23.3"	""	"1281"	"85"	"38.000"	"31.000"	"2.120894833096E-07"	"24"	"0"	"1.22E-07"	"1.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLGTDVAGGYSYSMLDAIR"	"[K].iGLGTDVAGGYSYSMLDAIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"763.39526"	"2288.17124"	"2288.17940"	"-3.57"	"-0.00272"	"20/176"	"20"	"176"	"706335.455810547"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"75.7057"	"25356"	"25356"	"25327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.5"	""	"22.2"	""	"22.1"	""	"21.7"	""	"18.7"	"26.2"	""	"1291"	"94"	"38.000"	"31.000"	"2.34907155820112E-08"	"24"	"0"	"9.039E-08"	"1.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPLAATSMLITQGLISK"	"[R].sVPLAATSMLITQGLISk.[G]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5XIG4"	"OCIA domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ociad1 PE=1 SV=1"	"Q5XIG4"	"OCIA domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ociad1 PE=1 SV=1"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"763.46033"	"2288.36643"	"2288.36636"	"0.03"	"0.00002"	"14/178"	"14"	"178"	"357041.153991699"	"HCD"	"MS2"	"66.10116"	"13.1"	"100.000"	"84.2211"	"28767"	"28767"	"28740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.1"	""	"18.1"	""	"22.5"	""	"17.5"	""	"25.3"	"27.7"	""	"462"	"45"	"33.000"	"26.000"	"0.000795448340063311"	"22"	"0"	"1.257E-05"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPLAATSMLITQGLISK"	"[R].sVPLAATSMLITQGLISk.[G]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5XIG4"	"OCIA domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ociad1 PE=1 SV=1"	"Q5XIG4"	"OCIA domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ociad1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.46118"	"2288.36899"	"2288.36636"	"1.15"	"0.00088"	"16/178"	"16"	"178"	"369275.338439941"	"HCD"	"MS2"	"64.91005"	"13.0"	"100.000"	"84.2896"	"28846"	"28846"	"28817"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"21.5"	""	"18.8"	""	"23.5"	""	"20.6"	"26.6"	""	"436"	"55"	"33.000"	"26.000"	"6.72134973154359E-05"	"16"	"0"	"1.739E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDDWANDGWGLKK"	"[R].vVDDWANDGWGLkk.[A]"	"N-Term(TMT6plex); K13(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.09705"	"2290.27658"	"2290.27988"	"-1.44"	"-0.00110"	"15/128"	"15"	"128"	"2489699.89880371"	"HCD"	"MS2"	"0"	"202.8"	"100.000"	"58.6035"	"18334"	"18334"	"18313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"495.4"	""	"371.8"	""	"354.8"	""	"219.1"	""	"209.1"	"256.8"	""	"1124"	"16"	"37.000"	"30.000"	"1.26396868847971"	"14"	"0"	"2.156E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDDWANDGWGLKK"	"[R].vVDDWANDGWGLkk.[A]"	"N-Term(TMT6plex); K13(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.09729"	"2290.27732"	"2290.27988"	"-1.12"	"-0.00085"	"14/128"	"14"	"128"	"2864008.96130371"	"HCD"	"MS2"	"0"	"221.0"	"100.000"	"58.6763"	"18414"	"18414"	"18389"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"550.5"	""	"412.7"	""	"382.6"	""	"242.0"	"2.2"	"236.3"	"249.7"	""	"1108"	"38"	"37.000"	"30.000"	"0.0091941114672041"	"15"	"0"	"6.868E-07"	"1.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGCPVWYDIIGPLDPK"	"[R].dGcPVWYDIIGPLDPk.[G]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"764.73102"	"2292.17850"	"2292.18087"	"-1.03"	"-0.00079"	"5/146"	"5"	"146"	"103703.969909668"	"HCD"	"MS2"	"9.140059"	"4.1"	"100.000"	"93.6435"	"32301"	"32301"	"32296"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.4"	""	"6.2"	""	"4.9"	""	"6.3"	""	"8.3"	"7.2"	""	"1371"	"9"	"38.000"	"31.000"	"8.9126624574182"	"15"	"0.0006037"	"0.006106"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGCPVWYDIIGPLDPK"	"[R].dGcPVWYDIIGPLDPk.[G]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"764.73114"	"2292.17887"	"2292.18087"	"-0.87"	"-0.00067"	"8/146"	"8"	"146"	"255242.314758301"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"93.8967"	"32381"	"32381"	"32378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"12.4"	""	"8.1"	""	"9.6"	""	"10.5"	"14.1"	""	"1376"	"31"	"38.000"	"31.000"	"0.0586932878444101"	"16"	"0.0001308"	"0.0002762"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGCPVWYDIIGPLDPK"	"[R].dGcPVWYDIIGPLDPk.[G]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"764.73169"	"2292.18052"	"2292.18087"	"-0.15"	"-0.00012"	"11/146"	"11"	"146"	"346420.395751953"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"93.7435"	"32304"	"32304"	"32301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.8"	""	"15.3"	""	"13.8"	""	"16.3"	""	"14.4"	"18.7"	""	"1379"	"21"	"38.000"	"31.000"	"0.518243985425553"	"18"	"0"	"5.287E-05"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGCPVWYDIIGPLDPK"	"[R].dGcPVWYDIIGPLDPk.[G]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"764.73199"	"2292.18143"	"2292.18087"	"0.25"	"0.00019"	"5/146"	"5"	"146"	"135058.074462891"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"93.4896"	"32222"	"32222"	"32219"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"5.8"	""	"5.7"	""	"6.9"	""	"8.0"	"10.4"	""	"1384"	"27"	"38.000"	"31.000"	"0.128264388340305"	"15"	"0.0002277"	"0.001125"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDPPPKDPVIETIR"	"[R].kDPPPkDPVIETIR.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"2"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.85205"	"2292.38637"	"2292.38943"	"-1.33"	"-0.00076"	"9/150"	"9"	"150"	"22575698.3178101"	"HCD"	"MS2"	"12.57334"	"682.1"	"94.300"	"35.1872"	"8802"	"8802"	"8779"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1395.7"	""	"892.3"	""	"831.0"	""	"1369.6"	""	"992.9"	"956.8"	""	"343"	"6"	"32.000"	"25.000"	"4.43878514948755"	"13"	"0.002651"	"0.03905"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDPPPKDPVIETIR"	"[R].kDPPPkDPVIETIR.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"2"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"573.85266"	"2292.38881"	"2292.38943"	"-0.27"	"-0.00015"	"10/150"	"10"	"150"	"30388647.0211182"	"HCD"	"MS2"	"3.192817"	"289.1"	"29.197"	"35.3017"	"8892"	"8892"	"8874"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"585.3"	""	"379.8"	""	"319.9"	""	"586.7"	""	"437.5"	"422.4"	""	"331"	"10"	"32.000"	"25.000"	"1.56602250206039"	"13"	"0.0006037"	"0.005874"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIQQAGQVWFPDSAFK"	"[K].iIQQAGQVWFPDSAFk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"3"	"3"	"0.9836"	"0.0000"	"1"	"1"	"1"	"765.09515"	"2293.27091"	"2293.27451"	"-1.57"	"-0.00120"	"15/148"	"15"	"148"	"327650.44708252"	"HCD"	"MS2"	"7.276492"	"14.1"	"100.000"	"75.9436"	"25453"	"25453"	"25423"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.8"	""	"18.4"	""	"20.1"	""	"21.0"	""	"25.9"	"30.6"	""	"1186"	"61"	"37.000"	"30.000"	"4.29590524324469E-05"	"17"	"0"	"3.563E-06"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGPDAAINLADPDGALAK"	"[K].lLGPDAAINLADPDGALAk.[R]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"765.11035"	"2293.31650"	"2293.31677"	"-0.12"	"-0.00009"	"20/182"	"20"	"182"	"2909018.52478027"	"HCD"	"MS2"	"7.85108"	"81.1"	"100.000"	"74.9008"	"25027"	"25027"	"25007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.3"	""	"102.6"	""	"109.4"	""	"145.9"	""	"158.7"	"153.8"	""	"775"	"36"	"35.000"	"28.000"	"0.0104296973652168"	"23"	"0"	"2.159E-06"	"1.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGPDAAINLADPDGALAK"	"[K].lLGPDAAINLADPDGALAk.[R]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"765.11047"	"2293.31687"	"2293.31677"	"0.04"	"0.00003"	"15/182"	"15"	"182"	"2646245.75512695"	"HCD"	"MS2"	"5.805103"	"74.0"	"100.000"	"74.9150"	"24981"	"24981"	"24961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.9"	""	"95.5"	""	"104.7"	""	"115.6"	""	"142.0"	"142.8"	""	"771"	"38"	"35.000"	"28.000"	"0.00629541525913266"	"23"	"0"	"1.674E-06"	"1.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.13440"	"2293.38864"	"2293.38954"	"-0.39"	"-0.00030"	"7/200"	"7"	"200"	"822039.594604492"	"HCD"	"MS2"	"29.21402"	"35.7"	"100.000"	"72.5365"	"24011"	"24011"	"23985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.4"	""	"45.0"	""	"49.7"	""	"60.0"	"1.3"	"65.3"	"67.8"	""	"295"	"20"	"31.000"	"24.000"	"0.14118612551599"	"14"	"0.0001889"	"0.001042"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"765.13440"	"2293.38864"	"2293.38954"	"-0.39"	"-0.00030"	"7/200"	"7"	"200"	"822039.594604492"	"HCD"	"MS2"	"29.21402"	"35.7"	"100.000"	"72.5365"	"24011"	"24011"	"23985"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.4"	""	"45.0"	""	"49.7"	""	"60.0"	"1.3"	"65.3"	"67.8"	""	"295"	"20"	"31.000"	"24.000"	"0.14118612551599"	"14"	"0.0001889"	"0.001042"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"765.13458"	"2293.38919"	"2293.38954"	"-0.15"	"-0.00011"	"15/200"	"15"	"200"	"986036.817932129"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"72.2274"	"23885"	"23885"	"23857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.0"	""	"49.4"	""	"60.9"	""	"48.1"	""	"72.4"	"60.0"	""	"290"	"34"	"31.000"	"24.000"	"0.00520436805235257"	"17"	"0"	"4.511E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"3"	"3"	"0.9412"	"0.0000"	"1"	"2"	"2"	"765.13458"	"2293.38919"	"2293.38954"	"-0.15"	"-0.00011"	"15/200"	"15"	"200"	"986036.817932129"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"72.2274"	"23885"	"23885"	"23857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.0"	""	"49.4"	""	"60.9"	""	"48.1"	""	"72.4"	"60.0"	""	"290"	"34"	"31.000"	"24.000"	"0.00520436805235257"	"17"	"0"	"4.511E-05"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.13495"	"2293.39029"	"2293.38954"	"0.33"	"0.00025"	"13/200"	"13"	"200"	"1086310.2991333"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"72.2099"	"23929"	"23929"	"23903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.2"	""	"50.6"	""	"66.7"	""	"58.8"	""	"61.2"	"63.7"	""	"285"	"30"	"31.000"	"24.000"	"0.013671458999102"	"14"	"0"	"7.81E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"765.13495"	"2293.39029"	"2293.38954"	"0.33"	"0.00025"	"13/200"	"13"	"200"	"1086310.2991333"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"72.2099"	"23929"	"23929"	"23903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.2"	""	"50.6"	""	"66.7"	""	"58.8"	""	"61.2"	"63.7"	""	"285"	"30"	"31.000"	"24.000"	"0.013671458999102"	"14"	"0"	"7.81E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPSDYFGEIALLMNRPR"	"[R].lGPSDYFGEIALLmNRPR.[A]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"765.40948"	"2294.21390"	"2294.21645"	"-1.11"	"-0.00085"	"18/152"	"18"	"152"	"1754274.57440186"	"HCD"	"MS2"	"26.06076"	"58.1"	"100.000"	"68.0824"	"22244"	"22244"	"22218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.9"	""	"75.2"	""	"71.3"	""	"110.0"	"0.4"	"109.2"	"102.3"	""	"1402"	"33"	"38.000"	"31.000"	"0.0328638180883831"	"15"	"0.0001889"	"0.0004348"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPSDYFGEIALLMNRPR"	"[R].lGPSDYFGEIALLmNRPR.[A]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"765.41010"	"2294.21573"	"2294.21645"	"-0.31"	"-0.00024"	"7/152"	"7"	"152"	"469290.80279541"	"HCD"	"MS2"	"35.25511"	"31.3"	"100.000"	"68.5311"	"22376"	"22376"	"22346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.2"	""	"37.4"	""	"43.5"	""	"54.7"	""	"59.0"	"60.2"	""	"1397"	"11"	"38.000"	"31.000"	"5.10700649813167"	"14"	"0.0004166"	"0.002263"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPSDYFGEIALLMNRPR"	"[R].lGPSDYFGEIALLmNRPR.[A]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"765.41046"	"2294.21683"	"2294.21645"	"0.16"	"0.00013"	"18/152"	"18"	"152"	"1550134.71704102"	"HCD"	"MS2"	"26.35155"	"56.9"	"100.000"	"68.2106"	"22245"	"22245"	"22218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.2"	""	"58.3"	""	"81.3"	""	"108.8"	""	"110.5"	"103.0"	""	"1412"	"30"	"38.000"	"31.000"	"0.0655850269066635"	"21"	"0"	"9.139E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILQDFTGVPAVVDFAAMR"	"[R].vILQDFTGVPAVVDFAAmR.[D]"	"N-Term(TMT6plex); M18(Oxidation)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"765.41827"	"2294.24027"	"2294.24161"	"-0.58"	"-0.00045"	"12/192"	"12"	"192"	"187671.302001953"	"HCD"	"MS2"	"2.566867"	"4.0"	"100.000"	"87.7650"	"30190"	"30190"	"30175"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.2"	""	"4.3"	""	"4.9"	""	"9.4"	""	"9.5"	"6.8"	""	"1338"	"43"	"38.000"	"31.000"	"0.00302291626786823"	"17"	"0"	"0.0001125"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILQDFTGVPAVVDFAAMR"	"[R].vILQDFTGVPAVVDFAAmR.[D]"	"N-Term(TMT6plex); M18(Oxidation)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"765.41840"	"2294.24063"	"2294.24161"	"-0.42"	"-0.00032"	"5/192"	"5"	"192"	"122194.125061035"	"HCD"	"MS2"	"6.186864"	"2.7"	"100.000"	"87.6270"	"30191"	"30191"	"30174"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.9"	""	"5.7"	""	"3.8"	""	"3.2"	""	"3.9"	"6.3"	""	"1333"	"29"	"38.000"	"31.000"	"0.0924272759943115"	"19"	"0.0001889"	"0.001069"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILQDFTGVPAVVDFAAMR"	"[R].vILQDFTGVPAVVDFAAmR.[D]"	"N-Term(TMT6plex); M18(Oxidation)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.41846"	"2294.24082"	"2294.24161"	"-0.34"	"-0.00026"	"10/192"	"10"	"192"	"153328.040100098"	"HCD"	"MS2"	"31.49772"	"3.6"	"100.000"	"87.4875"	"30086"	"30086"	"30074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.8"	""	"5.6"	""	"5.4"	""	"5.8"	""	"8.2"	"6.4"	""	"1324"	"19"	"38.000"	"31.000"	"0.80141596441042"	"14"	"0.000523"	"0.002993"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VILQDFTGVPAVVDFAAMR"	"[R].vILQDFTGVPAVVDFAAmR.[D]"	"N-Term(TMT6plex); M18(Oxidation)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"765.41919"	"2294.24302"	"2294.24161"	"0.61"	"0.00047"	"15/192"	"15"	"192"	"139344.310852051"	"HCD"	"MS2"	"6.958664"	"2.3"	"100.000"	"87.9190"	"30299"	"30299"	"30284"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.7"	""	"3.2"	""	"1.7"	""	"3.7"	""	"6.2"	"4.7"	""	"1320"	"45"	"38.000"	"31.000"	"0.00215547969233742"	"18"	"0.0001889"	"0.0004855"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTFVGTPFWMAPEVIK"	"[R].nTFVGTPFWMAPEVIk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"765.75787"	"2295.25907"	"2295.26117"	"-0.91"	"-0.00070"	"10/172"	"10"	"172"	"298586.652648926"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"83.6745"	"28595"	"28595"	"28571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.3"	""	"18.2"	""	"22.5"	""	"15.0"	""	"15.4"	"17.5"	""	"1247"	"31"	"37.000"	"30.000"	"0.0549333972320497"	"18"	"0"	"8.065E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPNIEMSDLSFSK"	"[K].kIPNIEMSDLSFSk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P07151"	"Beta-2-microglobulin OS=Rattus norvegicus OX=10116 GN=B2m PE=1 SV=1"	"P07151"	"Beta-2-microglobulin OS=Rattus norvegicus OX=10116 GN=B2m PE=1 SV=1"	"1"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"766.11121"	"2296.31906"	"2296.31897"	"0.04"	"0.00003"	"10/144"	"10"	"144"	"1159867.29327393"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"59.3719"	"18643"	"18643"	"18617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.0"	""	"73.4"	""	"85.7"	""	"120.6"	""	"169.0"	"163.3"	""	"679"	"53"	"35.000"	"28.000"	"0.000190475787863024"	"19"	"0"	"2.801E-06"	"1.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFYFDENPYFENK"	"[R].iDFYFDENPYFENk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.04810"	"2299.12973"	"2299.13232"	"-1.13"	"-0.00086"	"9/136"	"9"	"136"	"443689.46307373"	"HCD"	"MS2"	"42.61473"	"22.1"	"100.000"	"78.5164"	"26440"	"26440"	"26417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.1"	""	"25.3"	""	"30.3"	""	"49.5"	"1.9"	"35.5"	"40.6"	""	"1004"	"12"	"37.000"	"30.000"	"2.8953676462291"	"14"	"0"	"7.222E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSWIEEQEMGSFLSVAK"	"[R].TKSWIEEQEMGSFLSVAk.[G]"	"K18(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"1"	"3"	"3"	"0.1389"	"0.0000"	"1"	"1"	"1"	"767.07111"	"2299.19876"	"2299.18415"	"6.36"	"0.00487"	"15/196"	"15"	"196"	"947363.251586914"	"HCD"	"MS2"	"0"	"32.8"	"100.000"	"76.9900"	"25868"	"25868"	"25845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.2"	""	"43.7"	""	"45.7"	""	"40.8"	"0.2"	"62.5"	"75.1"	""	"1339"	"72"	"38.000"	"31.000"	"4.05275715647745E-06"	"26"	"0"	"0.0001316"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSWIEEQEMGSFLSVAK"	"[R].TKSWIEEQEMGSFLSVAk.[G]"	"K18(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"1"	"3"	"3"	"0.1316"	"0.0000"	"1"	"1"	"1"	"767.07227"	"2299.20224"	"2299.18415"	"7.87"	"0.00603"	"18/196"	"18"	"196"	"1001819.82470703"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"77.0556"	"25844"	"25844"	"25817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.5"	""	"42.6"	""	"41.6"	""	"47.9"	"0.9"	"69.5"	"69.3"	""	"1365"	"76"	"38.000"	"31.000"	"1.89279097142488E-06"	"21"	"0"	"4.178E-05"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSWIEEQEMGSFLSVAK"	"[R].TKSWIEEQEMGSFLSVAk.[G]"	"K18(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"1"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"767.07306"	"2299.20462"	"2299.18415"	"8.91"	"0.00682"	"13/196"	"13"	"196"	"475708.579162598"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"77.3668"	"25971"	"25971"	"25945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.3"	""	"28.9"	""	"27.4"	""	"35.2"	""	"41.5"	"44.0"	""	"1379"	"60"	"38.000"	"31.000"	"6.7691520671228E-05"	"27"	"0.0001889"	"0.0009707"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIILQSNPLLEAFGNAK"	"[K].dIILQSNPLLEAFGNAk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"0"	"3"	"3"	"0.8070"	"0.0000"	"1"	"1"	"1"	"767.77875"	"2301.32169"	"2301.32185"	"-0.07"	"-0.00005"	"14/172"	"14"	"172"	"207966.35949707"	"HCD"	"MS2"	"12.88771"	"9.9"	"100.000"	"85.6995"	"29416"	"29416"	"29390"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.1"	""	"13.6"	""	"13.3"	""	"18.0"	""	"19.2"	"15.1"	""	"792"	"57"	"35.000"	"28.000"	"8.1600944565492E-05"	"27"	"0"	"8.679E-06"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIILQSNPLLEAFGNAK"	"[K].dIILQSNPLLEAFGNAk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"Q63356"	"Unconventional myosin-Ie OS=Rattus norvegicus OX=10116 GN=Myo1e PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.78009"	"2301.32572"	"2301.32185"	"1.68"	"0.00129"	"14/172"	"14"	"172"	"227636.555236816"	"HCD"	"MS2"	"9.526467"	"10.3"	"100.000"	"85.6008"	"29328"	"29328"	"29305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"13.2"	""	"17.2"	""	"13.1"	""	"22.8"	"20.2"	""	"774"	"32"	"35.000"	"28.000"	"0.0273975018556661"	"15"	"0"	"5.194E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNIMVSTEWAAPNVFK"	"[R].hNIMVSTEWAAPNVFk.[D]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"4"	"4"	"0.9118"	"0.0000"	"1"	"1"	"1"	"576.31592"	"2302.24184"	"2302.24183"	"0.01"	"0.00000"	"12/152"	"12"	"152"	"4397553.47705078"	"HCD"	"MS2"	"24.08964"	"101.7"	"100.000"	"56.8273"	"17608"	"17608"	"17579"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.1"	""	"137.6"	""	"122.6"	""	"162.5"	""	"223.1"	"210.4"	""	"1250"	"34"	"37.000"	"30.000"	"0.0241479360658793"	"18"	"0"	"1.456E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEQTPLTALYVANLIK"	"[K].vAEQTPLTALYVANLIk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"768.13025"	"2302.37619"	"2302.37864"	"-1.06"	"-0.00082"	"18/164"	"18"	"164"	"1629794.17248535"	"HCD"	"MS2"	"20.23273"	"34.6"	"100.000"	"84.4026"	"28892"	"28892"	"28865"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.5"	""	"42.2"	""	"50.5"	""	"68.1"	""	"55.2"	"62.5"	""	"405"	"52"	"33.000"	"26.000"	"0.00012486048787695"	"16"	"0"	"2.471E-06"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEQTPLTALYVANLIK"	"[K].vAEQTPLTALYVANLIk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1151.69226"	"2302.37724"	"2302.37864"	"-0.61"	"-0.00070"	"15/164"	"15"	"164"	"230425.365722656"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"84.5522"	"28953"	"28953"	"28929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.1"	""	"22.3"	""	"19.4"	""	"21.5"	""	"22.9"	"22.6"	""	"402"	"40"	"33.000"	"26.000"	"0.002193795076262"	"15"	"0"	"0.0001722"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEQTPLTALYVANLIK"	"[K].vAEQTPLTALYVANLIk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"768.13080"	"2302.37784"	"2302.37864"	"-0.35"	"-0.00027"	"16/164"	"16"	"164"	"842905.503295898"	"HCD"	"MS2"	"0.8585714"	"19.4"	"100.000"	"85.0187"	"29142"	"29142"	"29122"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.0"	""	"26.5"	""	"27.0"	""	"29.1"	""	"36.6"	"39.3"	""	"395"	"44"	"32.000"	"25.000"	"0.000735473619852772"	"20"	"0"	"2.901E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEQTPLTALYVANLIK"	"[K].vAEQTPLTALYVANLIk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"1151.69275"	"2302.37822"	"2302.37864"	"-0.18"	"-0.00021"	"5/164"	"5"	"164"	"58965.6987304688"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"84.8161"	"29009"	"29009"	"28987"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.9"	""	"2.9"	""	""	""	"3.4"	""	"4.7"	"7.0"	""	"393"	"2"	"32.000"	"25.000"	"12.8044979432956"	"13"	"0.002361"	"0.03443"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEQTPLTALYVANLIK"	"[K].vAEQTPLTALYVANLIk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"768.13098"	"2302.37839"	"2302.37864"	"-0.11"	"-0.00008"	"16/164"	"16"	"164"	"683329.852783203"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"84.9708"	"29072"	"29072"	"29051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.5"	""	"23.9"	""	"28.3"	""	"30.7"	""	"30.9"	"40.8"	""	"389"	"49"	"32.000"	"25.000"	"0.000258178222028434"	"16"	"0"	"1.002E-05"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEQTPLTALYVANLIK"	"[K].vAEQTPLTALYVANLIk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"768.13110"	"2302.37876"	"2302.37864"	"0.05"	"0.00004"	"9/164"	"9"	"164"	"113632.801696777"	"HCD"	"MS2"	"21.95204"	"6.0"	"100.000"	"85.3923"	"29295"	"29295"	"29266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"5.9"	""	"9.3"	""	"12.0"	""	"11.4"	"12.0"	""	"390"	"6"	"32.000"	"25.000"	"4.46719192289715"	"15"	"0.0006037"	"0.004512"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEQTPLTALYVANLIK"	"[K].vAEQTPLTALYVANLIk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"1151.69373"	"2302.38017"	"2302.37864"	"0.67"	"0.00077"	"15/164"	"15"	"164"	"231403.60949707"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"84.5045"	"28882"	"28882"	"28860"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.8"	""	"17.1"	""	"22.5"	""	"22.8"	""	"25.3"	"29.1"	""	"371"	"43"	"32.000"	"25.000"	"0.000845948479089655"	"20"	"0"	"0.0001009"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEQTPLTALYVANLIK"	"[K].vAEQTPLTALYVANLIk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"768.13159"	"2302.38022"	"2302.37864"	"0.69"	"0.00053"	"16/164"	"16"	"164"	"1156609.85998535"	"HCD"	"MS2"	"24.33841"	"29.9"	"100.000"	"84.3273"	"28810"	"28810"	"28785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.3"	""	"37.1"	""	"39.7"	""	"57.3"	""	"47.4"	"58.8"	""	"371"	"49"	"32.000"	"25.000"	"0.000216942137034186"	"16"	"0"	"3.828E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEQTPLTALYVANLIK"	"[K].vAEQTPLTALYVANLIk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"0.9123"	"0.0000"	"1"	"1"	"1"	"768.13171"	"2302.38059"	"2302.37864"	"0.85"	"0.00065"	"20/164"	"20"	"164"	"13950707.5235596"	"HCD"	"MS2"	"0"	"118.1"	"49.425"	"84.6453"	"28940"	"28940"	"28923"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"167.9"	""	"143.3"	""	"170.1"	""	"202.9"	""	"212.6"	"225.9"	""	"367"	"57"	"32.000"	"25.000"	"3.27820469985351E-05"	"21"	"0"	"3.975E-06"	"1.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEQTPLTALYVANLIK"	"[K].vAEQTPLTALYVANLIk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"768.13245"	"2302.38279"	"2302.37864"	"1.80"	"0.00138"	"21/164"	"21"	"164"	"14857209.8166504"	"HCD"	"MS2"	"0"	"135.4"	"53.830"	"84.6954"	"29011"	"29011"	"29000"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.0"	""	"159.8"	""	"194.0"	""	"240.7"	""	"219.8"	"267.6"	""	"362"	"54"	"32.000"	"25.000"	"7.28917832129081E-05"	"16"	"0"	"1.397E-06"	"1.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVYIVQDLMETDLYK"	"[RK].dVYIVQDLMETDLYk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"P21708; P63086"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5;Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P21708; P63086"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5; Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"768.41162"	"2303.22031"	"2303.22451"	"-1.82"	"-0.00140"	"5/152"	"5"	"152"	"124827.516113281"	"HCD"	"MS2"	"40.54994"	"5.6"	"100.000"	"85.3078"	"29210"	"29210"	"29179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"7.3"	""	"8.5"	""	"8.7"	""	"11.7"	"9.6"	""	"1341"	"7"	"38.000"	"31.000"	"13.103846050974"	"15"	"0.0007076"	"0.007011"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFGGAPGFSLGSPLSSPVFPR"	"[R].tFGGAPGFSLGSPLSSPVFPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.74951"	"2307.23398"	"2307.23348"	"0.22"	"0.00017"	"15/190"	"15"	"190"	"425967.342956543"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"77.7172"	"26114"	"26114"	"26089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.6"	""	"14.4"	""	"19.2"	""	"23.6"	""	"27.2"	"37.7"	""	"1358"	"34"	"38.000"	"31.000"	"0.0290984445349861"	"15"	"0"	"9.281E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFGGAPGFSLGSPLSSPVFPR"	"[R].tFGGAPGFSLGSPLSSPVFPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.74969"	"2307.23453"	"2307.23348"	"0.45"	"0.00035"	"20/190"	"20"	"190"	"667485.795288086"	"HCD"	"MS2"	"10.28897"	"14.9"	"100.000"	"77.6954"	"26156"	"26156"	"26133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.9"	""	"18.2"	""	"16.5"	""	"22.8"	""	"25.1"	"43.9"	""	"1365"	"62"	"38.000"	"31.000"	"3.9820128366683E-05"	"16"	"0"	"3.794E-07"	"1.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFSEVELVQMVVDGVK"	"[R].lGFSEVELVQMVVDGVk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"5"	"769.77185"	"2307.30100"	"2307.30343"	"-1.05"	"-0.00081"	"9/162"	"9"	"162"	"99596.2009277344"	"HCD"	"MS2"	"10.00984"	"3.7"	"100.000"	"102.3452"	"34694"	"34694"	"34689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	"7.9"	""	"3.4"	""	"8.1"	""	"6.2"	"6.4"	""	"941"	"16"	"36.000"	"29.000"	"1.16027150816876"	"17"	"0.0004166"	"0.002401"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEFLSFMNTELAAFTK"	"[K].tEFLSFMNTELAAFTk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"770.08112"	"2308.22879"	"2308.22993"	"-0.49"	"-0.00038"	"8/164"	"8"	"164"	"78869.4669799805"	"HCD"	"MS2"	"47.10414"	"2.2"	"100.000"	"99.3159"	"33975"	"33975"	"33970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"2.9"	""	"2.2"	""	"4.3"	""	"4.8"	"7.1"	""	"1334"	"12"	"38.000"	"31.000"	"3.84703231082631"	"13"	"0.0001889"	"0.001043"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFWIFDVQNPEEVAK"	"[R].qFWIFDVQNPEEVAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"3"	"3"	"0.5250"	"0.0000"	"1"	"1"	"1"	"770.08344"	"2308.23575"	"2308.23779"	"-0.88"	"-0.00068"	"12/152"	"12"	"152"	"341185.988708496"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"79.0114"	"26693"	"26693"	"26671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.1"	""	"16.3"	""	"18.9"	""	"23.6"	""	"26.8"	"22.7"	""	"1321"	"40"	"38.000"	"31.000"	"0.00739388722030054"	""	"0"	"6.243E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFWIFDVQNPEEVAK"	"[R].qFWIFDVQNPEEVAk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"3"	"3"	"0.3611"	"0.0000"	"1"	"1"	"1"	"770.08435"	"2308.23850"	"2308.23779"	"0.31"	"0.00024"	"11/152"	"11"	"152"	"258263.019042969"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"78.9959"	"26636"	"26636"	"26609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.7"	""	"15.3"	""	"14.2"	""	"22.5"	""	"20.7"	"24.0"	""	"1292"	"36"	"38.000"	"31.000"	"0.0173873148333679"	""	"0"	"7.779E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPNVPEVEDSTDFFK"	"[R].iLPNVPEVEDSTDFFk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"770.08698"	"2308.24637"	"2308.24769"	"-0.57"	"-0.00044"	"7/156"	"7"	"156"	"167126.186889648"	"HCD"	"MS2"	"54.42672"	"12.4"	"100.000"	"79.7413"	"26940"	"26940"	"26913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.9"	""	"19.2"	""	"16.5"	""	"18.2"	""	"24.3"	"18.7"	""	"1272"	"10"	"38.000"	"31.000"	"6.62913885094142"	"13"	"0.0006037"	"0.005948"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPNMLPSTFETQSIK"	"[K].lFPNMLPSTFETQSIk.[E]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"3"	"3"	"0.5862"	"0.0000"	"1"	"1"	"1"	"771.09723"	"2311.27713"	"2311.27721"	"-0.03"	"-0.00003"	"9/156"	"9"	"156"	"201634.313720703"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"78.8069"	"26559"	"26559"	"26529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.9"	""	"10.5"	""	"13.8"	""	"20.3"	""	"19.7"	"20.7"	""	"1259"	"29"	"37.000"	"31.000"	"0.0885106916439781"	"26"	"0.0001889"	"0.001001"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1156.14929"	"2311.29131"	"2311.29497"	"-1.58"	"-0.00183"	"6/182"	"6"	"182"	"78694.8743286133"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"91.9109"	"31733"	"31733"	"31729"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"3.6"	""	"1.7"	""	"2.0"	""	"5.5"	"3.5"	""	"1139"	"11"	"37.000"	"30.000"	"4.36007267635961"	"13"	"0.00175"	"0.02439"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"1156.14954"	"2311.29180"	"2311.29497"	"-1.37"	"-0.00159"	"5/182"	"5"	"182"	"53763.4735717773"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"90.6120"	"31291"	"31291"	"31285"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.1"	""	"2.3"	""	""	""	"3.2"	""	"5.2"	"3.0"	""	"1127"	"11"	"37.000"	"30.000"	"4.7303570240368"	"17"	"0.0009404"	"0.009681"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"1156.14966"	"2311.29204"	"2311.29497"	"-1.27"	"-0.00147"	"12/182"	"12"	"182"	"276555.838806152"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"91.6519"	"31645"	"31645"	"31642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.5"	""	"13.1"	""	"13.8"	""	"17.9"	""	"21.5"	"20.2"	""	"1126"	"43"	"37.000"	"30.000"	"0.00270089931582456"	"29"	"0"	"4.058E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1156.15002"	"2311.29277"	"2311.29497"	"-0.95"	"-0.00110"	"6/182"	"6"	"182"	"53014.5065917969"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"90.4188"	"31193"	"31193"	"31176"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.4"	""	"2.8"	""	"2.7"	""	"2.7"	""	"1.8"	"4.2"	""	"1130"	"20"	"37.000"	"30.000"	"0.563700536059743"	"14"	"0.0004166"	"0.002464"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"771.10254"	"2311.29306"	"2311.29497"	"-0.82"	"-0.00064"	"12/182"	"12"	"182"	"275740.503112793"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"90.5112"	"31254"	"31254"	"31243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.4"	""	"7.2"	""	"5.8"	""	"9.9"	""	"14.4"	"13.1"	""	"1125"	"27"	"37.000"	"30.000"	"0.113271989054759"	"17"	"0"	"5.392E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.8382"	"0.0000"	"1"	"1"	"1"	"1156.15027"	"2311.29326"	"2311.29497"	"-0.74"	"-0.00085"	"16/182"	"16"	"182"	"334229.122558594"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"91.3939"	"31567"	"31567"	"31562"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.1"	""	"14.6"	""	"20.3"	""	"23.1"	""	"25.6"	"36.2"	""	"1126"	"68"	"37.000"	"30.000"	"9.60524385008756E-06"	"28"	"0"	"4.979E-06"	"1.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"771.10266"	"2311.29343"	"2311.29497"	"-0.67"	"-0.00051"	"16/182"	"16"	"182"	"1403921.21069336"	"HCD"	"MS2"	"0"	"24.1"	"100.000"	"91.0423"	"31442"	"31442"	"31438"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.5"	""	"27.2"	""	"27.0"	""	"34.3"	""	"49.3"	"58.4"	""	"1126"	"56"	"37.000"	"30.000"	"0.000149110557803557"	"20"	"0"	"1.118E-06"	"1.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"1156.15039"	"2311.29350"	"2311.29497"	"-0.63"	"-0.00073"	"13/182"	"13"	"182"	"203878.585083008"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"91.1403"	"31475"	"31475"	"31471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.0"	""	"13.3"	""	"7.7"	""	"12.5"	""	"16.8"	"13.3"	""	"1126"	"51"	"37.000"	"30.000"	"0.000412580212157203"	"29"	"0"	"1.621E-05"	"1.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"4"	"4"	"0.6829"	"0.0000"	"1"	"1"	"1"	"578.57886"	"2311.29360"	"2311.29497"	"-0.59"	"-0.00034"	"10/182"	"10"	"182"	"756830.146972656"	"HCD"	"MS2"	"0.7418464"	"12.8"	"100.000"	"91.0185"	"31433"	"31433"	"31426"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.4"	""	"13.8"	""	"18.2"	""	"23.5"	""	"26.9"	"27.0"	""	"1125"	"41"	"37.000"	"30.000"	"0.00440679174055994"	"28"	"0"	"3.869E-06"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"4"	"4"	"0.9070"	"0.0000"	"1"	"1"	"1"	"578.57886"	"2311.29360"	"2311.29497"	"-0.59"	"-0.00034"	"14/182"	"14"	"182"	"1447429.10150146"	"HCD"	"MS2"	"2.136762"	"19.6"	"100.000"	"91.2857"	"31528"	"31528"	"31523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.1"	""	"22.0"	""	"27.8"	""	"33.0"	""	"34.5"	"38.7"	""	"1125"	"43"	"37.000"	"30.000"	"0.00312696144714602"	"19"	"0"	"2.631E-06"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"1156.15051"	"2311.29375"	"2311.29497"	"-0.53"	"-0.00061"	"8/182"	"8"	"182"	"133548.12902832"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"90.8817"	"31384"	"31384"	"31378"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.7"	""	"6.0"	""	"7.3"	""	"10.6"	""	"11.9"	"10.4"	""	"1127"	"33"	"37.000"	"30.000"	"0.0259354579213094"	"26"	"0"	"0.000136"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"1156.15051"	"2311.29375"	"2311.29497"	"-0.53"	"-0.00061"	"13/182"	"13"	"182"	"293073.66809082"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"91.4863"	"31563"	"31563"	"31556"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.7"	""	"15.9"	""	"16.9"	""	"28.6"	""	"24.3"	"23.9"	""	"1127"	"53"	"37.000"	"30.000"	"0.000301921416508768"	"28"	"0"	"3.56E-05"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.10278"	"2311.29380"	"2311.29497"	"-0.51"	"-0.00039"	"9/182"	"9"	"182"	"115815.797363281"	"HCD"	"MS2"	"11.90251"	"3.6"	"100.000"	"90.0769"	"31066"	"31066"	"31055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"3.2"	""	"3.4"	""	"8.5"	""	"7.0"	"6.0"	""	"1127"	"24"	"37.000"	"30.000"	"0.215721742859029"	"14"	"0"	"0.000154"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"771.10278"	"2311.29380"	"2311.29497"	"-0.51"	"-0.00039"	"10/182"	"10"	"182"	"143145.855529785"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"92.1094"	"31800"	"31800"	"31789"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.9"	""	"6.5"	""	"5.9"	""	"7.6"	""	"5.3"	"8.1"	""	"1127"	"32"	"37.000"	"30.000"	"0.0393453959697486"	"26"	"0"	"2.014E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"4"	"4"	"0.8485"	"0.0000"	"1"	"1"	"1"	"578.57892"	"2311.29384"	"2311.29497"	"-0.49"	"-0.00028"	"12/182"	"12"	"182"	"1102722.88140869"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"91.7933"	"31694"	"31694"	"31690"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.0"	""	"27.6"	""	"21.7"	""	"28.7"	"0.8"	"29.9"	"27.4"	""	"1127"	"33"	"37.000"	"30.000"	"0.0311812786543067"	"19"	"0"	"1.523E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.10284"	"2311.29398"	"2311.29497"	"-0.43"	"-0.00033"	"7/182"	"7"	"182"	"160231.188903809"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"90.2368"	"31158"	"31158"	"31152"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.8"	""	"6.7"	""	"3.3"	""	"6.5"	""	"5.6"	"3.7"	""	"1128"	"11"	"37.000"	"30.000"	"4.9462846312501"	"13"	"0.0001889"	"0.000682"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"4"	"4"	"0.8824"	"0.0000"	"1"	"1"	"1"	"578.57898"	"2311.29409"	"2311.29497"	"-0.38"	"-0.00022"	"11/182"	"11"	"182"	"800925.836181641"	"HCD"	"MS2"	"1.996662"	"12.6"	"100.000"	"90.8743"	"31353"	"31353"	"31344"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.5"	""	"12.8"	""	"21.1"	""	"19.5"	"1.0"	"22.1"	"27.2"	""	"1122"	"34"	"37.000"	"30.000"	"0.022906717573264"	"18"	"0"	"6.935E-06"	"1.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"1156.15076"	"2311.29424"	"2311.29497"	"-0.32"	"-0.00037"	"5/182"	"5"	"182"	"90706.9549560547"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"90.6805"	"31284"	"31284"	"31280"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"3.7"	""	"3.8"	""	"6.8"	""	"8.0"	"8.3"	""	"1108"	"32"	"37.000"	"30.000"	"0.0343170355592537"	""	"0.0001889"	"0.0005252"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9464"	"0.0000"	"1"	"1"	"1"	"771.10297"	"2311.29435"	"2311.29497"	"-0.27"	"-0.00021"	"16/182"	"16"	"182"	"2653593.81982422"	"HCD"	"MS2"	"0"	"42.0"	"100.000"	"91.5703"	"31619"	"31619"	"31614"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.0"	""	"58.2"	""	"52.0"	""	"72.0"	""	"79.6"	"81.8"	""	"1108"	"56"	"37.000"	"30.000"	"0.000125172741670242"	"19"	"0"	"2.352E-06"	"1.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"1156.15088"	"2311.29448"	"2311.29497"	"-0.21"	"-0.00024"	"9/182"	"9"	"182"	"175414.903137207"	"HCD"	"MS2"	"3.45534"	"6.7"	"100.000"	"90.9624"	"31384"	"31384"	"31381"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.4"	""	"5.5"	""	"11.6"	""	"15.4"	""	"10.8"	"11.1"	""	"1108"	"50"	"37.000"	"30.000"	"0.000514647378276085"	"17"	"0"	"5.856E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"771.10303"	"2311.29453"	"2311.29497"	"-0.19"	"-0.00015"	"11/182"	"11"	"182"	"169675.030212402"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"91.9475"	"31722"	"31722"	"31716"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"6.5"	""	"2.8"	""	"7.7"	""	"7.9"	"7.8"	""	"1108"	"24"	"37.000"	"30.000"	"0.240718664191051"	"18"	"0"	"4.671E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9818"	"0.0000"	"1"	"1"	"1"	"771.10303"	"2311.29453"	"2311.29497"	"-0.19"	"-0.00015"	"16/182"	"16"	"182"	"1280629.42559814"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"91.8328"	"31708"	"31708"	"31701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.4"	""	"30.0"	""	"25.4"	""	"40.1"	""	"36.7"	"39.4"	""	"1108"	"55"	"37.000"	"30.000"	"0.000163120958512451"	"17"	"0"	"1.773E-06"	"1.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"4"	"4"	"0.9286"	"0.0000"	"1"	"1"	"1"	"578.57910"	"2311.29458"	"2311.29497"	"-0.17"	"-0.00010"	"12/182"	"12"	"182"	"416700.204711914"	"HCD"	"MS2"	"13.48814"	"8.1"	"100.000"	"90.7432"	"31334"	"31334"	"31329"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.4"	""	"10.9"	""	"8.3"	""	"12.0"	""	"19.9"	"17.3"	""	"1108"	"28"	"37.000"	"30.000"	"0.0856070959504282"	"16"	"0"	"1.709E-05"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"4"	"4"	"0.9024"	"0.0000"	"1"	"1"	"1"	"578.57910"	"2311.29458"	"2311.29497"	"-0.17"	"-0.00010"	"12/182"	"12"	"182"	"1151725.07061768"	"HCD"	"MS2"	"0.5706872"	"18.2"	"100.000"	"91.6476"	"31616"	"31616"	"31610"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.3"	""	"26.6"	""	"27.0"	""	"30.2"	""	"30.1"	"35.1"	""	"1108"	"41"	"37.000"	"30.000"	"0.00416399083286086"	"19"	"0"	"7.843E-06"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"771.10309"	"2311.29471"	"2311.29497"	"-0.11"	"-0.00009"	"14/182"	"14"	"182"	"583364.064208984"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"90.6071"	"31261"	"31261"	"31256"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.2"	""	"10.9"	""	"12.6"	""	"17.9"	""	"17.3"	"24.9"	""	"1110"	"47"	"37.000"	"30.000"	"0.00115423166134255"	"19"	"0"	"4.778E-06"	"1.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"1156.15100"	"2311.29473"	"2311.29497"	"-0.11"	"-0.00012"	"8/182"	"8"	"182"	"304693.146606445"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"91.2272"	"31479"	"31479"	"31475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.6"	""	"17.9"	""	"17.3"	""	"24.8"	""	"26.2"	"30.7"	""	"1110"	"44"	"37.000"	"30.000"	"0.00221458820810989"	"18"	"0"	"6.976E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"4"	"4"	"0.9455"	"0.0000"	"1"	"1"	"1"	"578.57916"	"2311.29482"	"2311.29497"	"-0.06"	"-0.00004"	"15/182"	"15"	"182"	"1867238.69897461"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"91.3885"	"31533"	"31533"	"31530"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.1"	""	"32.1"	""	"30.1"	""	"38.5"	""	"46.0"	"48.8"	""	"1110"	"55"	"37.000"	"30.000"	"0.000188492026287677"	"19"	"0"	"8.382E-07"	"1.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"771.10315"	"2311.29489"	"2311.29497"	"-0.03"	"-0.00002"	"14/182"	"14"	"182"	"313369.673522949"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"90.3494"	"31166"	"31166"	"31161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.6"	""	"5.7"	"1.7"	"11.7"	""	"12.5"	""	"12.6"	"14.4"	""	"1113"	"41"	"37.000"	"30.000"	"0.00399452523092513"	"19"	"0"	"7.33E-06"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"1156.15112"	"2311.29497"	"2311.29497"	"0.00"	"0.00000"	"10/182"	"10"	"182"	"91686.4020385742"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"91.7529"	"31652"	"31652"	"31647"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"3.5"	""	"4.0"	""	"6.0"	""	"4.1"	"7.2"	""	"1113"	"31"	"37.000"	"30.000"	"0.0454428089661057"	"17"	"0.0001889"	"0.000569"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"771.10321"	"2311.29508"	"2311.29497"	"0.05"	"0.00004"	"15/182"	"15"	"182"	"626764.207824707"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"90.7693"	"31344"	"31344"	"31337"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.1"	""	"11.5"	""	"18.1"	""	"17.3"	""	"24.7"	"24.8"	""	"1113"	"52"	"37.000"	"30.000"	"0.000365986586488292"	"18"	"0"	"4.123E-06"	"1.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9636"	"0.0000"	"1"	"1"	"1"	"771.10327"	"2311.29526"	"2311.29497"	"0.13"	"0.00010"	"16/182"	"16"	"182"	"2146600.43060303"	"HCD"	"MS2"	"0"	"35.8"	"100.000"	"91.3089"	"31537"	"31537"	"31527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.5"	""	"45.8"	""	"43.9"	""	"70.5"	"0.5"	"70.6"	"69.8"	""	"1111"	"55"	"37.000"	"30.000"	"0.00017851884292147"	"18"	"0"	"1.163E-06"	"1.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"4"	"4"	"0.9302"	"0.0000"	"1"	"1"	"1"	"578.57928"	"2311.29531"	"2311.29497"	"0.15"	"0.00008"	"13/182"	"13"	"182"	"1889181.64624023"	"HCD"	"MS2"	"0.8239794"	"26.1"	"100.000"	"91.5395"	"31609"	"31609"	"31605"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.8"	""	"37.2"	""	"34.5"	""	"46.9"	""	"48.5"	"49.7"	""	"1111"	"43"	"37.000"	"30.000"	"0.00301775559144047"	"18"	"0"	"2.631E-06"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9464"	"0.0000"	"1"	"1"	"1"	"771.10339"	"2311.29563"	"2311.29497"	"0.28"	"0.00022"	"16/182"	"16"	"182"	"1256056.25146484"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"90.8699"	"31352"	"31352"	"31344"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.8"	""	"24.4"	""	"26.9"	""	"36.4"	""	"38.2"	"45.7"	""	"1107"	"56"	"37.000"	"30.000"	"0.000148976451397355"	"19"	"0"	"1.538E-06"	"1.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"771.10339"	"2311.29563"	"2311.29497"	"0.28"	"0.00022"	"17/182"	"17"	"182"	"2709575.84008789"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"91.3797"	"31531"	"31531"	"31528"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.4"	""	"42.1"	""	"55.3"	""	"69.4"	""	"79.9"	"78.7"	""	"1107"	"55"	"37.000"	"30.000"	"0.000185403370573858"	"24"	"0"	"1.627E-06"	"1.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"771.10345"	"2311.29581"	"2311.29497"	"0.36"	"0.00028"	"15/182"	"15"	"182"	"1840944.54974365"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"91.6432"	"31615"	"31615"	"31610"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.7"	""	"31.3"	"2.3"	"34.8"	""	"54.3"	""	"60.7"	"57.2"	""	"1078"	"48"	"37.000"	"30.000"	"0.000958492602010979"	"17"	"0"	"1.795E-06"	"1.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"4"	"4"	"0.9259"	"0.0000"	"1"	"1"	"1"	"578.57941"	"2311.29580"	"2311.29497"	"0.36"	"0.00021"	"12/182"	"12"	"182"	"413974.128479004"	"HCD"	"MS2"	"22.07194"	"7.3"	"100.000"	"90.5856"	"31253"	"31253"	"31248"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.3"	""	"12.4"	""	"7.4"	""	"14.6"	""	"14.2"	"15.2"	""	"1078"	"27"	"37.000"	"30.000"	"0.117649142248338"	"16"	"0"	"1.421E-05"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"4"	"4"	"0.9189"	"0.0000"	"1"	"1"	"1"	"578.57947"	"2311.29604"	"2311.29497"	"0.46"	"0.00027"	"13/182"	"13"	"182"	"1424322.12194824"	"HCD"	"MS2"	"2.002266"	"21.4"	"100.000"	"91.1306"	"31444"	"31444"	"31440"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.0"	""	"26.9"	""	"28.5"	""	"43.5"	""	"35.3"	"37.0"	""	"1078"	"37"	"37.000"	"30.000"	"0.011523615662417"	"18"	"0"	"4.972E-06"	"1.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVFDEAILAALEPPEPK"	"[K].nVFDEAILAALEPPEPk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"3"	"3"	"0.9821"	"0.0000"	"1"	"1"	"1"	"771.10388"	"2311.29709"	"2311.29497"	"0.92"	"0.00071"	"17/182"	"17"	"182"	"2212239.55639648"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"91.1262"	"31443"	"31443"	"31440"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.8"	""	"45.8"	""	"42.4"	""	"59.0"	""	"64.6"	"63.7"	""	"1067"	"56"	"37.000"	"30.000"	"0.00012797773622969"	"17"	"0"	"1.952E-06"	"1.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"RPDEISQILAQSQGSITLK"	"[].RPDEISQILAQSQGSITLk.[]"	"K19(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"4"	"771.76306"	"2313.27463"	"2313.29754"	"-9.90"	"-0.00764"	"4/208"	"4"	"208"	"221092.319519043"	"HCD"	"MS2"	"12.84603"	"8.8"	"100.000"	"80.1956"	"27176"	"27176"	"27151"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.2"	""	"7.5"	""	"13.8"	""	"11.9"	""	"18.1"	"14.2"	""	"1259"	"5"	"37.000"	"31.000"	"18.2808226098537"	"15"	"0.007874"	"0.3204"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQNAWFLPPQADIVATK"	"[K].gQNAWFLPPQADIVATk.[M]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q794F9"	"4F2 cell-surface antigen heavy chain OS=Rattus norvegicus OX=10116 GN=Slc3a2 PE=1 SV=1"	"Q794F9"	"4F2 cell-surface antigen heavy chain OS=Rattus norvegicus OX=10116 GN=Slc3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"772.10339"	"2314.29563"	"2314.29597"	"-0.15"	"-0.00012"	"10/166"	"10"	"166"	"579498.594787598"	"HCD"	"MS2"	"8.959432"	"34.0"	"100.000"	"71.5260"	"23598"	"23598"	"23571"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.9"	""	"43.8"	""	"51.1"	""	"61.4"	""	"65.4"	"64.5"	""	"998"	"25"	"36.000"	"29.000"	"0.146926639526558"	"15"	"0"	"0.0001528"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNPEAQALWQVVGSSVIMR"	"[R].tNPEAQALWQVVGSSVIMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70513"	"Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2"	"O70513"	"Galectin-3-binding protein OS=Rattus norvegicus OX=10116 GN=Lgals3bp PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"772.41754"	"2315.23807"	"2315.23792"	"0.07"	"0.00005"	"9/206"	"9"	"206"	"677010.205322266"	"HCD"	"MS2"	"27.55522"	"19.6"	"100.000"	"82.4441"	"28042"	"28042"	"28016"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.5"	""	"33.4"	""	"29.6"	""	"24.7"	""	"34.0"	"37.6"	""	"1353"	"5"	"38.000"	"31.000"	"20.4770693411053"	"15"	"0.0001889"	"0.0005469"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1158.63574"	"2316.26421"	"2316.26737"	"-1.37"	"-0.00158"	"4/170"	"4"	"170"	"81176.2244873047"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"82.7461"	"28216"	"28216"	"28189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.7"	""	"2.6"	""	"10.7"	""	"9.2"	""	"7.7"	"7.2"	""	"1236"	"13"	"37.000"	"30.000"	"3.19881022145451"	"13"	"0.0006037"	"0.00426"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"772.76013"	"2316.26584"	"2316.26737"	"-0.66"	"-0.00051"	"13/170"	"13"	"170"	"363259.533630371"	"HCD"	"MS2"	"5.943364"	"14.4"	"100.000"	"83.1522"	"28382"	"28382"	"28365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.2"	""	"18.6"	""	"20.0"	""	"21.8"	""	"33.7"	"22.7"	""	"1231"	"33"	"37.000"	"30.000"	"0.0301458863321278"	"15"	"0"	"7.531E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9851"	"0.0000"	"1"	"1"	"1"	"772.76031"	"2316.26639"	"2316.26737"	"-0.42"	"-0.00033"	"20/170"	"20"	"170"	"2648601.44262695"	"HCD"	"MS2"	"2.233177"	"72.4"	"100.000"	"82.5434"	"28082"	"28082"	"28064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.3"	""	"96.7"	""	"111.8"	""	"99.0"	"0.3"	"131.8"	"146.1"	""	"1244"	"67"	"37.000"	"30.000"	"1.13446312684281E-05"	"17"	"0"	"8.209E-07"	"1.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9710"	"0.0000"	"1"	"1"	"1"	"772.76038"	"2316.26657"	"2316.26737"	"-0.35"	"-0.00027"	"17/170"	"17"	"170"	"1249472.43054199"	"HCD"	"MS2"	"0"	"39.4"	"100.000"	"82.8386"	"28254"	"28254"	"28237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.1"	""	"53.9"	""	"64.7"	""	"64.3"	""	"69.6"	"71.0"	""	"1242"	"69"	"37.000"	"30.000"	"8.45457147811355E-06"	"18"	"0"	"3.367E-06"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"772.76044"	"2316.26676"	"2316.26737"	"-0.27"	"-0.00021"	"6/170"	"6"	"170"	"266809.764770508"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"83.1849"	"28344"	"28344"	"28319"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.3"	""	"17.9"	""	"20.1"	""	"19.8"	"1.5"	"21.7"	"24.0"	""	"1243"	"30"	"37.000"	"30.000"	"0.063744267216525"	"16"	"0"	"8.892E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1158.63770"	"2316.26811"	"2316.26737"	"0.32"	"0.00037"	"7/170"	"7"	"170"	"113561.89151001"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"82.6473"	"28125"	"28125"	"28096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"13.4"	""	"16.4"	""	"15.7"	""	"17.1"	"14.8"	""	"1234"	"10"	"37.000"	"30.000"	"6.01568606471627"	"13"	"0.0006037"	"0.004459"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9710"	"0.0000"	"1"	"1"	"1"	"772.76123"	"2316.26914"	"2316.26737"	"0.76"	"0.00059"	"18/170"	"18"	"170"	"882905.199584961"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"82.8575"	"28210"	"28210"	"28192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.6"	""	"38.0"	""	"37.5"	""	"42.9"	""	"49.2"	"59.0"	""	"1217"	"69"	"37.000"	"30.000"	"7.60782619887483E-06"	"18"	"0"	"1.223E-06"	"1.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"772.76129"	"2316.26932"	"2316.26737"	"0.84"	"0.00065"	"20/170"	"20"	"170"	"1756068.60314941"	"HCD"	"MS2"	"16.09595"	"48.3"	"100.000"	"82.5383"	"28131"	"28131"	"28109"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.8"	""	"68.0"	""	"71.6"	""	"65.7"	"2.1"	"91.8"	"98.1"	""	"1217"	"88"	"37.000"	"30.000"	"9.98298876991922E-08"	"20"	"0"	"4.441E-07"	"1.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDGKEDLIWEILK"	"[R].nGDGkEDLIWEILk.[V]"	"N-Term(TMT6plex); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"773.11707"	"2317.33664"	"2317.33706"	"-0.18"	"-0.00014"	"13/146"	"13"	"146"	"4960228.53436279"	"HCD"	"MS2"	"0.6056263"	"321.1"	"100.000"	"75.1728"	"25138"	"25138"	"25119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"600.1"	""	"326.9"	""	"312.2"	""	"608.4"	""	"592.4"	"606.3"	""	"802"	"13"	"36.000"	"29.000"	"1.88427537550691"	"16"	"0"	"7.742E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDGKEDLIWEILK"	"[R].nGDGkEDLIWEILk.[V]"	"N-Term(TMT6plex); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.11719"	"2317.33701"	"2317.33706"	"-0.02"	"-0.00002"	"14/146"	"14"	"146"	"746078.734863281"	"HCD"	"MS2"	"17.08228"	"51.7"	"100.000"	"75.5284"	"25283"	"25283"	"25263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.3"	""	"47.9"	""	"52.9"	""	"89.8"	"0.6"	"97.3"	"113.1"	""	"799"	"9"	"36.000"	"29.000"	"4.93760999661082"	"14"	"0.0001308"	"0.0002252"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDGKEDLIWEILK"	"[R].nGDGkEDLIWEILk.[V]"	"N-Term(TMT6plex); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.11731"	"2317.33738"	"2317.33706"	"0.14"	"0.00011"	"17/146"	"17"	"146"	"459484.000427246"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"75.6003"	"25261"	"25261"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"60.0"	""	"34.2"	""	"33.4"	""	"66.6"	"1.6"	"67.5"	"74.9"	""	"798"	"18"	"36.000"	"29.000"	"0.630917967668883"	"14"	"0"	"7.275E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDGKEDLIWEILK"	"[R].nGDGkEDLIWEILk.[V]"	"N-Term(TMT6plex); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"773.11749"	"2317.33792"	"2317.33706"	"0.37"	"0.00029"	"5/146"	"5"	"146"	"2745635.43945313"	"HCD"	"MS2"	"3.433588"	"177.9"	"100.000"	"75.1134"	"25062"	"25062"	"25041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"335.8"	""	"175.8"	""	"181.5"	""	"341.8"	""	"324.9"	"325.9"	""	"789"	"17"	"35.000"	"28.000"	"0.724514376450922"	"16"	"0"	"8.819E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLEGQEAHYNSLSIAK"	"[R].sLLEGQEAHYNSLSIAk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"773.42865"	"2318.27140"	"2318.27563"	"-1.83"	"-0.00141"	"17/176"	"17"	"176"	"2120797.05615234"	"HCD"	"MS2"	"0"	"87.1"	"100.000"	"45.8831"	"13163"	"13163"	"13133"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.8"	""	"80.9"	""	"82.6"	""	"174.0"	"1.2"	"181.3"	"192.9"	""	"1299"	"80"	"38.000"	"31.000"	"7.05633442539284E-07"	"22"	"0"	"3.296E-07"	"1.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLEGQEAHYNSLSIAK"	"[R].sLLEGQEAHYNSLSIAk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"773.42896"	"2318.27231"	"2318.27563"	"-1.43"	"-0.00111"	"16/176"	"16"	"176"	"1997262.84564209"	"HCD"	"MS2"	"0"	"80.2"	"100.000"	"46.1955"	"13339"	"13339"	"13312"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.9"	""	"74.1"	""	"86.1"	""	"160.3"	"2.9"	"175.2"	"166.7"	""	"1292"	"87"	"38.000"	"31.000"	"1.44288765594852E-07"	"24"	"0"	"1.849E-06"	"1.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDGKEDLIWEILK"	"[R].nGDGkEDLIWEILk.[V]"	"N-Term(TMT6plex); N1(Deamidated); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.44543"	"2318.32175"	"2318.32107"	"0.29"	"0.00023"	"5/146"	"5"	"146"	"344975.336975098"	"HCD"	"MS2"	"6.554479"	"27.5"	"100.000"	"81.3709"	"27604"	"27604"	"27584"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.3"	""	"32.1"	""	"35.4"	""	"52.4"	""	"53.1"	"49.9"	""	"974"	"9"	"36.000"	"29.000"	"6.1309667554376"	"13"	"0.0006737"	"0.006538"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDGKEDLIWEILK"	"[R].nGDGkEDLIWEILk.[V]"	"N-Term(TMT6plex); N1(Deamidated); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.44550"	"2318.32193"	"2318.32107"	"0.37"	"0.00029"	"10/146"	"10"	"146"	"715261.85144043"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"78.3570"	"26375"	"26375"	"26353"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.7"	""	"36.5"	""	"41.4"	""	"71.8"	""	"72.0"	"70.1"	""	"962"	"9"	"36.000"	"29.000"	"6.09740547477624"	"13"	"0.0001889"	"0.001001"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDGKEDLIWEILK"	"[R].nGDGkEDLIWEILk.[V]"	"N-Term(TMT6plex); N1(Deamidated); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.44550"	"2318.32193"	"2318.32107"	"0.37"	"0.00029"	"10/146"	"10"	"146"	"1509469.51647949"	"HCD"	"MS2"	"28.41433"	"100.8"	"100.000"	"81.0246"	"27463"	"27463"	"27440"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.1"	""	"112.6"	""	"121.5"	""	"185.7"	""	"192.9"	"166.2"	""	"962"	"12"	"36.000"	"29.000"	"3.25195911163543"	"13"	"0"	"9.709E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDGKEDLIWEILK"	"[R].nGDGkEDLIWEILk.[V]"	"N-Term(TMT6plex); N1(Deamidated); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.44556"	"2318.32212"	"2318.32107"	"0.45"	"0.00035"	"12/146"	"12"	"146"	"1973243.2154541"	"HCD"	"MS2"	"4.491505"	"130.3"	"100.000"	"81.1187"	"27552"	"27552"	"27534"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"230.5"	""	"138.8"	""	"144.6"	""	"235.4"	""	"254.5"	"231.2"	""	"959"	"10"	"36.000"	"29.000"	"5.14977923217627"	"13"	"0"	"0.0001303"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAIYDGFDGLANGQIK"	"[K].mFAIYDGFDGLAnGQIk.[E]"	"N-Term(TMT6plex); N13(Deamidated); K17(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"0.0857"	"0.0000"	"1"	"1"	"1"	"773.74164"	"2319.21036"	"2319.20953"	"0.36"	"0.00028"	"9/142"	"9"	"142"	"178329.447998047"	"HCD"	"MS2"	"6.730907"	"10.4"	"100.000"	"81.8208"	"27788"	"27788"	"27760"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.0"	""	"18.0"	""	"14.4"	""	"13.5"	""	"17.8"	"26.3"	""	"1417"	"35"	"38.000"	"31.000"	"0.0203863677684022"	"16"	"0.0001889"	"0.0006036"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAIYDGFDGLANGQIK"	"[K].mFAIYDGFDGLAnGQIk.[E]"	"N-Term(TMT6plex); N13(Deamidated); K17(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"0.1875"	"0.0000"	"1"	"1"	"1"	"773.74249"	"2319.21292"	"2319.20953"	"1.47"	"0.00113"	"12/142"	"12"	"142"	"178067.707214355"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"81.8089"	"27834"	"27834"	"27806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.7"	""	"14.9"	""	"16.0"	""	"15.2"	""	"19.5"	"22.2"	""	"1419"	"48"	"38.000"	"31.000"	"0.00121046545499772"	"18"	"0"	"3.66E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTSAITPFVWLDVGSIPGR"	"[K].sSTSAITPFVWLDVGSIPGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"Q4FZV0"	"Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"773.75671"	"2319.25559"	"2319.25461"	"0.42"	"0.00033"	"11/182"	"11"	"182"	"253867.138916016"	"HCD"	"MS2"	"31.09861"	"8.2"	"100.000"	"86.1835"	"29558"	"29558"	"29537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.6"	""	"10.7"	""	"10.3"	""	"17.0"	""	"13.3"	"16.4"	""	"1353"	"26"	"38.000"	"31.000"	"0.164160172932325"	"15"	"0.0001859"	"0.0003573"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAALNPESNTSGLDIFAK"	"[K].lAALNPESNTSGLDIFAk.[F]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"4"	"4"	"0.9231"	"0.0000"	"1"	"1"	"1"	"580.57867"	"2319.29287"	"2319.29603"	"-1.36"	"-0.00079"	"11/176"	"11"	"176"	"591967.456542969"	"HCD"	"MS2"	"12.76037"	"21.4"	"100.000"	"74.6491"	"24925"	"24925"	"24895"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.5"	""	"26.5"	"1.6"	"32.0"	""	"31.2"	""	"38.8"	"42.0"	""	"1199"	"39"	"37.000"	"30.000"	"0.00781248483682153"	"18"	"0.0001889"	"0.0007024"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAALNPESNTSGLDIFAK"	"[K].lAALNPESNTSGLDIFAk.[F]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1160.15100"	"2319.29473"	"2319.29603"	"-0.56"	"-0.00065"	"16/176"	"16"	"176"	"369757.01184082"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"74.4534"	"24793"	"24793"	"24769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.0"	""	"34.6"	""	"31.8"	""	"29.8"	""	"36.5"	"37.7"	""	"1191"	"63"	"37.000"	"30.000"	"2.9436201410066E-05"	"16"	"0"	"1.858E-05"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAALNPESNTSGLDIFAK"	"[K].lAALNPESNTSGLDIFAk.[F]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.77002"	"2319.29551"	"2319.29603"	"-0.23"	"-0.00018"	"19/176"	"19"	"176"	"3044736.13104248"	"HCD"	"MS2"	"0"	"81.7"	"100.000"	"74.6170"	"24912"	"24912"	"24895"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.8"	""	"118.4"	""	"130.1"	""	"125.5"	"0.7"	"147.2"	"131.6"	""	"1180"	"68"	"37.000"	"30.000"	"1.04918485192296E-05"	"17"	"0"	"6.258E-07"	"1.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAALNPESNTSGLDIFAK"	"[K].lAALNPESNTSGLDIFAk.[F]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.77002"	"2319.29551"	"2319.29603"	"-0.23"	"-0.00018"	"18/176"	"18"	"176"	"3567904.17840576"	"HCD"	"MS2"	"5.2664"	"97.0"	"100.000"	"74.3032"	"24784"	"24784"	"24767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.1"	""	"148.3"	""	"153.5"	""	"133.2"	"1.6"	"163.6"	"150.8"	""	"1180"	"65"	"37.000"	"30.000"	"1.96269136443463E-05"	"17"	"0"	"1.696E-06"	"1.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAALNPESNTSGLDIFAK"	"[K].lAALNPESNTSGLDIFAk.[F]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"773.77039"	"2319.29660"	"2319.29603"	"0.25"	"0.00019"	"20/176"	"20"	"176"	"8512482.60272217"	"HCD"	"MS2"	"0.5389124"	"207.6"	"100.000"	"74.3958"	"24770"	"24770"	"24753"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"332.3"	""	"312.3"	""	"348.5"	""	"291.6"	"4.6"	"348.4"	"325.0"	""	"1163"	"70"	"37.000"	"30.000"	"6.00550757450253E-06"	"17"	"0"	"4.712E-07"	"1.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAALNPESNTSGLDIFAK"	"[K].lAALNPESNTSGLDIFAk.[F]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"1160.15234"	"2319.29741"	"2319.29603"	"0.59"	"0.00069"	"11/176"	"11"	"176"	"263897.967834473"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"74.3768"	"24814"	"24814"	"24783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.6"	""	"22.7"	""	"21.9"	""	"24.6"	""	"23.9"	"23.9"	""	"1151"	"36"	"37.000"	"30.000"	"0.0139973340722198"	"16"	"0"	"0.0001643"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQALLDQYNSQKPK"	"[R].vQALLDQYNSQkPk.[N]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"773.79120"	"2319.35904"	"2319.36394"	"-2.11"	"-0.00163"	"9/136"	"9"	"136"	"659109.131408691"	"HCD"	"MS2"	"51.8826"	"59.8"	"100.000"	"48.1947"	"14109"	"14109"	"14080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.4"	""	"67.8"	""	"70.4"	""	"106.5"	""	"109.7"	"110.1"	""	"615"	"36"	"34.000"	"27.000"	"0.00852795932180442"	"17"	"0"	"8.9E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQALLDQYNSQKPK"	"[R].vQALLDQYNSQkPk.[N]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"773.79224"	"2319.36216"	"2319.36394"	"-0.77"	"-0.00060"	"6/136"	"6"	"136"	"542933.894592285"	"HCD"	"MS2"	"53.50535"	"53.7"	"100.000"	"48.5499"	"14302"	"14302"	"14271"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.6"	""	"64.6"	""	"68.5"	""	"102.2"	""	"104.6"	"95.1"	""	"579"	"24"	"34.000"	"27.000"	"0.122362563829892"	"17"	"0.0001889"	"0.0003973"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPSSGLVTPQPTALTFAK"	"[K].fPSSGLVTPQPTALTFAk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"A1L134"	"Ancient ubiquitous protein 1 OS=Rattus norvegicus OX=10116 GN=Aup1 PE=2 SV=1"	"A1L134"	"Ancient ubiquitous protein 1 OS=Rattus norvegicus OX=10116 GN=Aup1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.11676"	"2320.33573"	"2320.33169"	"1.74"	"0.00135"	"16/176"	"16"	"176"	"542413.35333252"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"70.9038"	"23344"	"23344"	"23315"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.9"	""	"33.0"	""	"34.1"	""	"42.1"	"1.0"	"50.4"	"61.3"	""	"813"	"37"	"36.000"	"29.000"	"0.00760432290058697"	"15"	"0"	"2.861E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQALLDQYNSQKPK"	"[R].vQALLDqYNSQkPk.[N]"	"N-Term(TMT6plex); Q7(Deamidated); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"774.12665"	"2320.36539"	"2320.34796"	"7.51"	"0.00581"	"6/136"	"6"	"136"	"540285.979431152"	"HCD"	"MS2"	"61.16173"	"56.0"	"100.000"	"48.2774"	"14143"	"14143"	"14112"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.8"	""	"52.5"	""	"75.6"	""	"95.1"	"1.4"	"116.9"	"103.8"	""	"563"	"10"	"34.000"	"27.000"	"2.60902595281287"	"15"	"0.0009727"	"0.01032"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLKPNDQILAEDK"	"[K].ySLkPNDQILAEDk.[H]"	"N-Term(TMT6plex); K4(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.44788"	"2321.32907"	"2321.33197"	"-1.25"	"-0.00097"	"14/146"	"14"	"146"	"1721988.76757813"	"HCD"	"MS2"	"0"	"127.5"	"100.000"	"44.1302"	"12501"	"12501"	"12476"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.2"	""	"137.8"	""	"164.9"	""	"199.5"	"0.6"	"266.6"	"255.9"	""	"878"	"17"	"36.000"	"29.000"	"0.94724979561802"	"14"	"0"	"3.669E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLKPNDQILAEDK"	"[K].ySLkPNDQILAEDk.[H]"	"N-Term(TMT6plex); K4(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.44806"	"2321.32962"	"2321.33197"	"-1.01"	"-0.00078"	"16/146"	"16"	"146"	"1483175.32995605"	"HCD"	"MS2"	"0"	"112.4"	"100.000"	"43.7861"	"12311"	"12311"	"12290"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.9"	""	"132.2"	""	"123.1"	""	"177.0"	""	"238.4"	"226.6"	""	"875"	"24"	"36.000"	"29.000"	"0.171782159237325"	"14"	"0"	"1.11E-05"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASLIGVEGGHLIDSSLGVLR"	"[K].vASLIGVEGGHLIDSSLGVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.45093"	"2321.33823"	"2321.33901"	"-0.34"	"-0.00026"	"21/186"	"21"	"186"	"1399799.47216797"	"HCD"	"MS2"	"40.87815"	"45.3"	"100.000"	"76.9968"	"25871"	"25871"	"25845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.5"	""	"46.6"	""	"42.2"	""	"81.8"	""	"103.1"	"104.7"	""	"770"	"42"	"35.000"	"28.000"	"0.00254366977482924"	"15"	"0"	"2.003E-06"	"1.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASLIGVEGGHLIDSSLGVLR"	"[K].vASLIGVEGGHLIDSSLGVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.45160"	"2321.34024"	"2321.33901"	"0.53"	"0.00041"	"16/186"	"16"	"186"	"1538004.49664307"	"HCD"	"MS2"	"8.629121"	"45.5"	"100.000"	"77.3091"	"25947"	"25947"	"25929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.1"	""	"53.2"	""	"54.4"	""	"66.2"	"1.9"	"94.8"	"102.4"	""	"767"	"43"	"35.000"	"28.000"	"0.00202658754055781"	"15"	"0"	"1.682E-06"	"1.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASLIGVEGGHLIDSSLGVLR"	"[K].vASLIGVEGGHLIDSSLGVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.45172"	"2321.34061"	"2321.33901"	"0.69"	"0.00053"	"15/186"	"15"	"186"	"426974.359924316"	"HCD"	"MS2"	"19.76878"	"19.2"	"100.000"	"77.6527"	"26088"	"26088"	"26057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.7"	""	"21.8"	""	"24.6"	""	"29.9"	""	"41.8"	"37.5"	""	"764"	"24"	"35.000"	"28.000"	"0.169068758242523"	"14"	"0"	"8.43E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASLIGVEGGHLIDSSLGVLR"	"[K].vASLIGVEGGHLIDSSLGVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.45190"	"2321.34116"	"2321.33901"	"0.93"	"0.00072"	"19/186"	"19"	"186"	"1882207.44519043"	"HCD"	"MS2"	"31.20474"	"49.3"	"100.000"	"77.0027"	"25822"	"25822"	"25801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.9"	""	"48.6"	""	"54.3"	""	"95.6"	"1.0"	"105.7"	"113.4"	""	"764"	"46"	"35.000"	"28.000"	"0.000914246618946858"	"15"	"0"	"1.442E-07"	"1.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASLIGVEGGHLIDSSLGVLR"	"[K].vASLIGVEGGHLIDSSLGVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"774.45374"	"2321.34665"	"2321.33901"	"3.29"	"0.00255"	"14/186"	"14"	"186"	"1152483.31542969"	"HCD"	"MS2"	"22.24932"	"40.0"	"100.000"	"77.3035"	"25996"	"25996"	"25973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.7"	""	"44.9"	""	"56.0"	""	"56.4"	"1.0"	"84.0"	"80.4"	""	"730"	"31"	"35.000"	"28.000"	"0.0287271713238711"	"16"	"0"	"1.759E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPNPDFFEDLEPFR"	"[R].kIPNPDFFEDLEPFR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.75537"	"2322.25156"	"2322.25344"	"-0.81"	"-0.00063"	"13/152"	"13"	"152"	"3787877.74108887"	"HCD"	"MS2"	"3.054286"	"133.5"	"100.000"	"74.1464"	"24720"	"24720"	"24703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"184.5"	""	"167.6"	""	"162.6"	""	"240.1"	""	"256.7"	"256.0"	""	"1328"	"25"	"38.000"	"31.000"	"0.195960292650648"	"14"	"0"	"6.3E-06"	"1.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPNPDFFEDLEPFR"	"[R].kIPNPDFFEDLEPFR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.75555"	"2322.25211"	"2322.25344"	"-0.57"	"-0.00044"	"9/152"	"9"	"152"	"6755696.29516602"	"HCD"	"MS2"	"0.7846837"	"206.7"	"100.000"	"73.8329"	"24592"	"24592"	"24575"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"306.1"	""	"245.5"	""	"272.0"	""	"379.4"	"2.0"	"395.6"	"358.1"	""	"1323"	"31"	"38.000"	"31.000"	"0.0559151956073532"	"14"	"0"	"1.502E-06"	"1.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPNPDFFEDLEPFR"	"[R].kIPNPDFFEDLEPFR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.75574"	"2322.25266"	"2322.25344"	"-0.34"	"-0.00026"	"10/152"	"10"	"152"	"891030.0078125"	"HCD"	"MS2"	"28.53962"	"37.7"	"100.000"	"73.5331"	"24469"	"24469"	"24447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.5"	""	"44.7"	""	"43.2"	""	"69.7"	"1.0"	"71.0"	"72.4"	""	"1320"	"58"	"38.000"	"31.000"	"0.000116558496165287"	"16"	"0"	"1.297E-05"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPNPDFFEDLEPFR"	"[R].kIPNPDFFEDLEPFR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.75580"	"2322.25284"	"2322.25344"	"-0.26"	"-0.00020"	"10/152"	"10"	"152"	"6543566.04089355"	"HCD"	"MS2"	"1.63845"	"213.2"	"100.000"	"73.8467"	"24546"	"24546"	"24529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"309.6"	""	"279.2"	""	"266.1"	""	"395.6"	""	"385.7"	"385.1"	""	"1319"	"40"	"38.000"	"31.000"	"0.00676417445362803"	"15"	"0"	"1.138E-06"	"1.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPNPDFFEDLEPFR"	"[R].kIPNPDFFEDLEPFR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.75586"	"2322.25302"	"2322.25344"	"-0.18"	"-0.00014"	"8/152"	"8"	"152"	"3859881.23999023"	"HCD"	"MS2"	"2.74538"	"137.0"	"100.000"	"74.1605"	"24674"	"24674"	"24657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.4"	""	"171.2"	""	"170.0"	""	"246.5"	""	"255.5"	"257.0"	""	"1319"	"34"	"38.000"	"31.000"	"0.0273032785543612"	"15"	"0"	"1.009E-05"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIPNPDFFEDLEPFR"	"[R].kIPNPDFFEDLEPFR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.75610"	"2322.25376"	"2322.25344"	"0.14"	"0.00011"	"13/152"	"13"	"152"	"1403848.10150146"	"HCD"	"MS2"	"21.39008"	"61.8"	"100.000"	"73.5651"	"24431"	"24431"	"24401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.5"	""	"73.3"	""	"88.2"	""	"117.3"	"2.8"	"108.1"	"113.9"	""	"1306"	"20"	"38.000"	"31.000"	"0.625047728555533"	"14"	"0"	"3.113E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDLKDWVQETMAK"	"[R].aTDLkDWVQETMAk.[N]"	"N-Term(TMT6plex); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"1"	"3"	"3"	""	"0.0000"	"1"	"1"	"3"	"775.10266"	"2323.29343"	"2323.29348"	"-0.02"	"-0.00002"	"6/140"	"6"	"140"	"728705.905029297"	"HCD"	"MS2"	"12.62812"	"63.9"	"100.000"	"68.1999"	"22292"	"22292"	"22266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"120.9"	""	"79.3"	""	"78.4"	""	"106.9"	"1.7"	"117.2"	"100.1"	""	"1079"	"0"	"37.000"	"30.000"	"49.08982105851"	"13"	"0.00109"	"0.01481"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDLKDWVQETMAK"	"[R].aTDLkDWVQETMAk.[N]"	"N-Term(TMT6plex); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"775.10278"	"2323.29380"	"2323.29348"	"0.14"	"0.00011"	"6/140"	"6"	"140"	"1011474.31781006"	"HCD"	"MS2"	"15.58012"	"81.3"	"100.000"	"68.2589"	"22265"	"22265"	"22234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.8"	""	"92.1"	""	"91.7"	""	"115.1"	""	"161.6"	"118.6"	""	"1077"	"21"	"37.000"	"30.000"	"0.479938630185022"	"14"	"0"	"0.0001137"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFSEVELVQMVVDGVK"	"[R].lGFSEVELVQmVVDGVk.[L]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"775.10345"	"2323.29581"	"2323.29834"	"-1.09"	"-0.00084"	"5/162"	"5"	"162"	"133729.761413574"	"HCD"	"MS2"	"16.11256"	"6.5"	"100.000"	"93.5190"	"32261"	"32261"	"32254"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"6.3"	""	"8.8"	""	"14.8"	""	"13.2"	"11.3"	""	"1070"	"9"	"37.000"	"30.000"	"6.43211472520317"	"14"	"0.003507"	"0.0818"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFSEVELVQMVVDGVK"	"[R].lGFSEVELVQmVVDGVk.[L]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"775.10400"	"2323.29746"	"2323.29834"	"-0.38"	"-0.00029"	"7/162"	"7"	"162"	"140486.75012207"	"HCD"	"MS2"	"21.85731"	"7.7"	"100.000"	"93.8778"	"32350"	"32350"	"32342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.2"	""	"10.2"	""	"8.9"	""	"22.2"	""	"11.4"	"14.8"	""	"1058"	"8"	"37.000"	"30.000"	"8.0808244480794"	"13"	"0.0005564"	"0.003457"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFSEVELVQMVVDGVK"	"[R].lGFSEVELVQmVVDGVk.[L]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"775.10400"	"2323.29746"	"2323.29834"	"-0.38"	"-0.00029"	"8/162"	"8"	"162"	"133412.866760254"	"HCD"	"MS2"	"16.65743"	"6.6"	"100.000"	"93.9409"	"32397"	"32397"	"32387"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.0"	""	"5.7"	""	"10.0"	""	"15.8"	""	"15.4"	"11.1"	""	"1058"	"20"	"37.000"	"30.000"	"0.568140399128518"	"14"	"0.0006037"	"0.004392"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFSEVELVQMVVDGVK"	"[R].lGFSEVELVQmVVDGVk.[L]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"775.10431"	"2323.29837"	"2323.29834"	"0.01"	"0.00001"	"8/162"	"8"	"162"	"241914.121154785"	"HCD"	"MS2"	"29.87419"	"9.9"	"100.000"	"93.3375"	"32175"	"32175"	"32171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.8"	""	"9.2"	""	"10.5"	""	"29.3"	""	"17.6"	"17.7"	""	"1043"	"11"	"37.000"	"30.000"	"3.91069830166876"	"17"	"0.0003839"	"0.001713"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGFSEVELVQMVVDGVK"	"[R].lGFSEVELVQmVVDGVk.[L]"	"N-Term(TMT6plex); M11(Oxidation); K17(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"775.10468"	"2323.29947"	"2323.29834"	"0.49"	"0.00038"	"7/162"	"7"	"162"	"182760.375671387"	"HCD"	"MS2"	"20.38874"	"6.9"	"100.000"	"93.6048"	"32256"	"32256"	"32250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"4.4"	""	"6.5"	""	"20.9"	""	"16.3"	"11.1"	""	"1034"	"8"	"37.000"	"30.000"	"8.61966808888899"	"13"	"0.003507"	"0.07938"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELKPGDNLNVNFHLR"	"[R].vELkPGDNLNVNFHLR.[T]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"0.7143"	"0.0000"	"1"	"1"	"1"	"581.58746"	"2323.32802"	"2323.32867"	"-0.28"	"-0.00016"	"13/154"	"13"	"154"	"29806547.3043823"	"HCD"	"MS2"	"10.2936"	"353.4"	"71.787"	"47.4904"	"13820"	"13820"	"13800"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"648.3"	""	"573.4"	""	"417.9"	""	"596.3"	"0.1"	"551.9"	"551.5"	""	"757"	"21"	"35.000"	"28.000"	"0.331181358923585"	"20"	"0"	"0.0001303"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELKPGDNLNVNFHLR"	"[R].vELkPGDNLNVNFHLR.[T]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"775.11505"	"2323.33060"	"2323.32867"	"0.83"	"0.00064"	"13/154"	"13"	"154"	"2509268.40808105"	"HCD"	"MS2"	"2.995885"	"154.6"	"100.000"	"47.6256"	"13876"	"13876"	"13848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.6"	""	"230.0"	""	"186.0"	""	"259.1"	"3.7"	"241.9"	"249.0"	""	"748"	"34"	"35.000"	"28.000"	"0.0159908519420693"	"15"	"0"	"5.719E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELKPGDNLNVNFHLR"	"[R].vELkPGDNLNVNFHLR.[T]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"4"	"4"	"0.7500"	"0.0000"	"1"	"1"	"1"	"581.58820"	"2323.33095"	"2323.32867"	"0.98"	"0.00057"	"15/154"	"15"	"154"	"58267992.6928711"	"HCD"	"MS2"	"1.693765"	"226.1"	"24.122"	"47.8618"	"14020"	"14020"	"14002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"419.8"	""	"371.9"	""	"267.2"	""	"384.1"	"1.0"	"324.5"	"366.6"	""	"738"	"20"	"35.000"	"28.000"	"0.365616987665431"	"18"	"0"	"0.0001379"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEFLSFMNTELAAFTK"	"[K].tEFLSFmNTELAAFTk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"775.41321"	"2324.22507"	"2324.22484"	"0.10"	"0.00008"	"10/164"	"10"	"164"	"307905.590881348"	"HCD"	"MS2"	"18.05388"	"15.6"	"100.000"	"79.1729"	"26759"	"26759"	"26735"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.5"	""	"11.5"	""	"18.7"	""	"43.4"	""	"30.9"	"28.6"	""	"1377"	"32"	"38.000"	"31.000"	"0.0398019128638836"	"17"	"0"	"0.0001674"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEFLSFMNTELAAFTK"	"[K].tEFLSFmNTELAAFTk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"Q6B345"	"Protein S100-A11 OS=Rattus norvegicus OX=10116 GN=S100a11 PE=3 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"775.41510"	"2324.23075"	"2324.22484"	"2.54"	"0.00197"	"13/164"	"13"	"164"	"399905.223937988"	"HCD"	"MS2"	"27.9896"	"19.5"	"100.000"	"79.1529"	"26700"	"26700"	"26673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.0"	""	"18.7"	""	"21.3"	""	"47.3"	""	"40.0"	"41.5"	""	"1380"	"30"	"38.000"	"31.000"	"0.0668111720820261"	"17"	"0"	"0.0001199"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDALETLGFLNHYQMK"	"[K].sDALETLGFLNHYQMk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"775.74817"	"2325.22995"	"2325.23132"	"-0.59"	"-0.00046"	"15/140"	"15"	"140"	"2390947.5178833"	"HCD"	"MS2"	"15.94739"	"115.0"	"100.000"	"65.8313"	"21334"	"21334"	"21315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.8"	""	"111.5"	""	"111.0"	""	"188.0"	""	"260.1"	"280.9"	""	"1398"	"43"	"38.000"	"31.000"	"0.0031367302756326"	"16"	"0"	"4.738E-06"	"1.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDALETLGFLNHYQMK"	"[K].sDALETLGFLNHYQMk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"0.8814"	"0.0000"	"1"	"1"	"1"	"775.74902"	"2325.23252"	"2325.23132"	"0.51"	"0.00040"	"14/140"	"14"	"140"	"2122655.08062744"	"HCD"	"MS2"	"18.39146"	"102.7"	"100.000"	"65.9432"	"21327"	"21327"	"21305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.7"	""	"103.9"	""	"84.8"	""	"155.7"	""	"248.2"	"247.9"	""	"1395"	"59"	"38.000"	"31.000"	"8.28980303637321E-05"	"24"	"0"	"2.834E-06"	"1.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATNVEQAFMTMAAEIK"	"[K].nATNVEQAFMTMAAEIk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"776.40894"	"2327.21225"	"2327.21396"	"-0.73"	"-0.00057"	"11/184"	"11"	"184"	"122817.940307617"	"HCD"	"MS2"	"3.885125"	"5.4"	"100.000"	"88.1642"	"30346"	"30346"	"30338"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.3"	""	"6.8"	""	"6.4"	""	"9.4"	""	"10.1"	"11.8"	""	"1398"	"27"	"38.000"	"31.000"	"0.132274818943284"	"17"	"0.0001308"	"0.000206"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATNVEQAFMTMAAEIK"	"[K].nATNVEQAFMTMAAEIk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"776.40979"	"2327.21482"	"2327.21396"	"0.37"	"0.00029"	"13/184"	"13"	"184"	"180010.163635254"	"HCD"	"MS2"	"4.817112"	"6.0"	"100.000"	"87.8952"	"30241"	"30241"	"30235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.3"	""	"4.9"	""	"6.8"	""	"10.8"	""	"14.5"	"12.6"	""	"1419"	"41"	"38.000"	"31.000"	"0.00515172176800242"	"16"	"0"	"1.942E-05"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATNVEQAFMTMAAEIK"	"[K].nATNVEQAFMTMAAEIk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"776.41028"	"2327.21628"	"2327.21396"	"1.00"	"0.00077"	"13/184"	"13"	"184"	"199933.436401367"	"HCD"	"MS2"	"5.1258"	"6.6"	"100.000"	"88.0765"	"30357"	"30357"	"30347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.5"	""	"8.2"	""	"8.8"	""	"9.9"	""	"15.4"	"15.6"	""	"1412"	"46"	"38.000"	"31.000"	"0.00158783255172006"	"19"	"0"	"5.24E-06"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFK"	"[K].lAMQEFMILPVGASSFk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"776.43427"	"2327.28824"	"2327.29075"	"-1.08"	"-0.00084"	"14/174"	"14"	"174"	"191819.498535156"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"90.4106"	"31218"	"31218"	"31208"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.6"	""	"2.6"	""	"8.5"	""	"7.9"	""	"7.9"	"25.8"	""	"1161"	"49"	"37.000"	"30.000"	"0.000819978044653509"	"18"	"0"	"3.959E-05"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAMQEFMILPVGASSFK"	"[K].lAMQEFMILPVGASSFk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"776.43561"	"2327.29227"	"2327.29075"	"0.65"	"0.00051"	"14/174"	"14"	"174"	"256298.024963379"	"HCD"	"MS2"	"15.90469"	"9.5"	"100.000"	"90.2932"	"31144"	"31144"	"31140"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.3"	""	"9.5"	""	"9.3"	""	"8.2"	""	"11.5"	"38.9"	""	"1118"	"38"	"37.000"	"30.000"	"0.00960310788421091"	"15"	"0"	"3.25E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKPWNYTYNPQTK"	"[R].tkPWNYTYNPQTk.[S]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O08730"	"Glycogenin-1 OS=Rattus norvegicus OX=10116 GN=Gyg1 PE=2 SV=4"	"O08730"	"Glycogenin-1 OS=Rattus norvegicus OX=10116 GN=Gyg1 PE=2 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"776.77014"	"2328.29587"	"2328.29553"	"0.15"	"0.00011"	"5/140"	"5"	"140"	"1909518.76165771"	"HCD"	"MS2"	"4.227099"	"110.3"	"100.000"	"39.2393"	"10509"	"10509"	"10478"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.8"	""	"136.4"	""	"157.3"	""	"149.1"	"0.4"	"222.9"	"204.1"	""	"1153"	"20"	"37.000"	"30.000"	"0.579161003095495"	"14"	"0"	"0.000114"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVGFLPPFPTLDPEEK"	"[K].aNVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"4"	"4"	"0.9667"	"0.0000"	"1"	"1"	"1"	"583.07623"	"2329.28310"	"2329.28441"	"-0.56"	"-0.00033"	"13/168"	"13"	"168"	"1032652.67022705"	"HCD"	"MS2"	"42.44955"	"20.6"	"100.000"	"80.4292"	"27220"	"27220"	"27201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.0"	""	"33.0"	""	"21.9"	""	"34.0"	""	"40.7"	"32.4"	""	"1261"	"30"	"37.000"	"31.000"	"0.0587063515482467"	"16"	"0"	"1.297E-05"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVGFLPPFPTLDPEEK"	"[K].aNVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"4"	"4"	"0.8571"	"0.0000"	"1"	"1"	"1"	"583.07629"	"2329.28335"	"2329.28441"	"-0.45"	"-0.00026"	"13/168"	"13"	"168"	"1082889.46960449"	"HCD"	"MS2"	"24.22876"	"22.1"	"100.000"	"80.4170"	"27266"	"27266"	"27247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.7"	""	"29.4"	""	"31.4"	""	"33.2"	""	"38.7"	"36.4"	""	"1259"	"28"	"37.000"	"31.000"	"0.0961602833660867"	"18"	"0"	"6.373E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVGFLPPFPTLDPEEK"	"[K].aNVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1165.14539"	"2329.28349"	"2329.28441"	"-0.39"	"-0.00046"	"5/168"	"5"	"168"	"75600.3392944336"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"80.5117"	"27305"	"27305"	"27279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"2.2"	""	"6.5"	""	"3.1"	""	"3.2"	"4.6"	""	"1258"	"9"	"37.000"	"30.000"	"8.48497653150151"	"13"	"0.0008731"	"0.00865"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVGFLPPFPTLDPEEK"	"[K].aNVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.9683"	"0.0000"	"1"	"1"	"1"	"777.09943"	"2329.28373"	"2329.28441"	"-0.29"	"-0.00023"	"17/168"	"17"	"168"	"2744216.67779541"	"HCD"	"MS2"	"0"	"56.9"	"100.000"	"80.5672"	"27328"	"27328"	"27311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.5"	""	"93.3"	""	"83.1"	""	"78.3"	""	"90.9"	"83.1"	""	"1259"	"63"	"37.000"	"31.000"	"3.25833500712882E-05"	"19"	"0"	"3.931E-06"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVGFLPPFPTLDPEEK"	"[K].aNVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.9636"	"0.0000"	"1"	"1"	"1"	"777.09967"	"2329.28446"	"2329.28441"	"0.02"	"0.00002"	"8/168"	"8"	"168"	"3001867.50158691"	"HCD"	"MS2"	"0"	"66.2"	"100.000"	"80.5793"	"27282"	"27282"	"27265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.8"	""	"111.0"	""	"90.7"	""	"97.4"	""	"106.6"	"96.7"	""	"1251"	"55"	"37.000"	"30.000"	"0.000202874430652018"	"18"	"0"	"2.471E-06"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVGFLPPFPTLDPEEK"	"[K].aNVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"777.09991"	"2329.28519"	"2329.28441"	"0.34"	"0.00026"	"16/168"	"16"	"168"	"1468217.67480469"	"HCD"	"MS2"	"0"	"36.0"	"100.000"	"80.2672"	"27205"	"27205"	"27183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.9"	""	"66.8"	""	"44.9"	""	"52.8"	"1.1"	"63.9"	"48.4"	""	"1248"	"47"	"37.000"	"30.000"	"0.00111476824670768"	"18"	"0"	"1.027E-05"	"1.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVGFLPPFPTLDPEEK"	"[K].aNVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"777.09998"	"2329.28537"	"2329.28441"	"0.42"	"0.00032"	"15/168"	"15"	"168"	"1086150.89294434"	"HCD"	"MS2"	"4.3262"	"28.0"	"100.000"	"80.2794"	"27159"	"27159"	"27137"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.9"	""	"47.2"	""	"42.8"	""	"36.7"	""	"43.6"	"45.3"	""	"1246"	"48"	"37.000"	"30.000"	"0.00095827034090879"	"16"	"0"	"1.088E-05"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVGFLPPFPTLDPEEK"	"[K].aNVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1165.14746"	"2329.28765"	"2329.28441"	"1.39"	"0.00162"	"3/168"	"3"	"168"	"50604.9841308594"	"HCD"	"MS2"	"0"	"0.7"	"100.000"	"80.6000"	"27290"	"27290"	"27265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.1"	""	"2.4"	""	""	""	"2.1"	""	""	""	""	"1227"	"3"	"37.000"	"30.000"	"32.4201161964073"	"13"	"0.00286"	"0.04914"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIHAPPGEFNEVFNDVR"	"[K].fIIHAPPGEFNEVFNDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"777.40833"	"2330.21042"	"2330.21308"	"-1.14"	"-0.00089"	"11/164"	"11"	"164"	"1299549.73406982"	"HCD"	"MS2"	"9.16109"	"19.7"	"100.000"	"66.2423"	"21502"	"21502"	"21475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.6"	""	"24.7"	""	"27.9"	""	"36.7"	""	"38.5"	"31.6"	""	"1435"	"48"	"38.000"	"31.000"	"0.00115298034903674"	"16"	"0"	"4.036E-06"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIHAPPGEFNEVFNDVR"	"[K].fIIHAPPGEFNEVFNDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"777.40833"	"2330.21042"	"2330.21308"	"-1.14"	"-0.00089"	"11/164"	"11"	"164"	"2765828.98596191"	"HCD"	"MS2"	"27.48371"	"66.3"	"100.000"	"66.5469"	"21626"	"21626"	"21603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.5"	""	"97.3"	""	"89.0"	""	"100.7"	"0.1"	"119.1"	"113.8"	""	"1435"	"8"	"38.000"	"31.000"	"11.7441585412445"	"13"	"0.0001889"	"0.0004063"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIIHAPPGEFNEVFNDVR"	"[K].fIIHAPPGEFNEVFNDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"3"	"3"	"0.9701"	"0.0000"	"1"	"1"	"1"	"777.40900"	"2330.21244"	"2330.21308"	"-0.28"	"-0.00022"	"12/164"	"12"	"164"	"1387388.38513184"	"HCD"	"MS2"	"13.51302"	"29.0"	"100.000"	"66.4140"	"21519"	"21519"	"21497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.9"	""	"41.0"	""	"39.8"	""	"54.5"	""	"51.2"	"47.5"	""	"1430"	"67"	"38.000"	"31.000"	"1.55348134288758E-05"	"19"	"0"	"2.846E-06"	"1.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPCFSALTVDETYVPK"	"[R].rPcFSALTVDETYVPk.[E]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"4"	"4"	"0.8966"	"0.0000"	"1"	"1"	"1"	"583.31128"	"2330.22329"	"2330.22888"	"-2.40"	"-0.00140"	"8/164"	"8"	"164"	"10930631.3710938"	"HCD"	"MS2"	"24.55265"	"214.4"	"100.000"	"56.5186"	"17536"	"17536"	"17509"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"279.6"	""	"284.0"	""	"264.6"	""	"315.8"	""	"487.7"	"405.4"	""	"1442"	"29"	"38.000"	"31.000"	"0.0907685221903595"	"18"	"0"	"7.675E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPCFSALTVDETYVPK"	"[R].rPcFSALTVDETYVPk.[E]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"4"	"4"	"0.8333"	"0.0000"	"1"	"1"	"1"	"583.31189"	"2330.22573"	"2330.22888"	"-1.35"	"-0.00079"	"8/164"	"8"	"164"	"11821474.0388794"	"HCD"	"MS2"	"19.93234"	"216.2"	"100.000"	"56.3315"	"17405"	"17405"	"17387"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"285.2"	""	"287.6"	""	"266.2"	""	"326.4"	"1.8"	"485.8"	"399.6"	""	"1449"	"24"	"38.000"	"31.000"	"0.279279070128852"	"18"	"0"	"0.0001432"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPCFSALTVDETYVPK"	"[R].rPcFSALTVDETYVPk.[E]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"777.41400"	"2330.22745"	"2330.22888"	"-0.61"	"-0.00048"	"8/164"	"8"	"164"	"6380704.72595215"	"HCD"	"MS2"	"13.64822"	"143.6"	"100.000"	"56.4771"	"17519"	"17519"	"17493"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"204.4"	""	"218.0"	""	"197.6"	""	"229.4"	""	"267.5"	"251.8"	""	"1451"	"30"	"38.000"	"31.000"	"0.08084206841208"	"19"	"0"	"4.963E-05"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPCFSALTVDETYVPK"	"[R].rPcFSALTVDETYVPk.[E]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"4"	"4"	"0.9474"	"0.0000"	"1"	"1"	"1"	"583.31238"	"2330.22768"	"2330.22888"	"-0.51"	"-0.00030"	"8/164"	"8"	"164"	"5497502.675354"	"HCD"	"MS2"	"18.27786"	"146.3"	"100.000"	"56.8253"	"17661"	"17661"	"17637"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.3"	""	"170.5"	""	"190.3"	""	"219.5"	"6.0"	"342.5"	"281.7"	""	"1440"	"19"	"38.000"	"31.000"	"0.842039561534307"	"14"	"0.0001308"	"0.0002648"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPCFSALTVDETYVPK"	"[R].rPcFSALTVDETYVPk.[E]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"777.41449"	"2330.22892"	"2330.22888"	"0.01"	"0.00001"	"14/164"	"14"	"164"	"9636282.67437744"	"HCD"	"MS2"	"2.248621"	"132.0"	"59.104"	"56.7679"	"17638"	"17638"	"17621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"189.4"	""	"191.1"	""	"170.0"	""	"195.6"	""	"272.4"	"234.4"	""	"1431"	"33"	"38.000"	"31.000"	"0.0393196495245131"	"16"	"0"	"2.908E-05"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPCFSALTVDETYVPK"	"[R].rPcFSALTVDETYVPk.[E]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"777.41467"	"2330.22947"	"2330.22888"	"0.25"	"0.00019"	"16/164"	"16"	"164"	"8716964.68255615"	"HCD"	"MS2"	"5.252294"	"184.4"	"100.000"	"56.2994"	"17392"	"17392"	"17371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"259.8"	""	"273.5"	""	"250.5"	""	"298.0"	""	"360.8"	"304.3"	""	"1429"	"31"	"38.000"	"31.000"	"0.0597038356526227"	"16"	"0"	"6.036E-05"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPCFSALTVDETYVPK"	"[R].rPcFSALTVDETYVPk.[E]"	"N-Term(TMT6plex); C3(Methylthio); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"777.41492"	"2330.23020"	"2330.22888"	"0.56"	"0.00044"	"17/164"	"17"	"164"	"6273032.89788818"	"HCD"	"MS2"	"6.122105"	"136.9"	"80.666"	"56.6063"	"17517"	"17517"	"17499"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"191.2"	""	"184.7"	""	"168.2"	""	"200.3"	"0.1"	"296.1"	"258.9"	""	"1430"	"24"	"38.000"	"31.000"	"0.254862560399764"	"15"	"0"	"5.927E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITPLQVVLPNTALHLK"	"[K].dITPLQVVLPNTALHLk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"777.47778"	"2330.41880"	"2330.42117"	"-1.02"	"-0.00079"	"15/172"	"15"	"172"	"883439.919372559"	"HCD"	"MS2"	"35.26192"	"36.9"	"100.000"	"71.1398"	"23492"	"23492"	"23466"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.1"	""	"57.4"	""	"57.4"	""	"46.5"	"3.3"	"52.2"	"64.0"	""	"311"	"41"	"31.000"	"24.000"	"0.00117687515175761"	"15"	"0"	"3.094E-05"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITPLQVVLPNTALHLK"	"[K].dITPLQVVLPNTALHLk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"777.47791"	"2330.41916"	"2330.42117"	"-0.86"	"-0.00067"	"11/172"	"11"	"172"	"4831601.32183838"	"HCD"	"MS2"	"0"	"76.6"	"100.000"	"70.7411"	"23329"	"23329"	"23306"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.6"	""	"106.7"	""	"109.1"	""	"122.4"	"2.2"	"136.7"	"146.4"	""	"311"	"57"	"31.000"	"24.000"	"2.79081078972458E-05"	"23"	"0"	"6.715E-07"	"1.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITPLQVVLPNTALHLK"	"[K].dITPLQVVLPNTALHLk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"777.47803"	"2330.41953"	"2330.42117"	"-0.71"	"-0.00055"	"16/172"	"16"	"172"	"3667393.59649658"	"HCD"	"MS2"	"2.308555"	"71.6"	"100.000"	"71.0794"	"23415"	"23415"	"23395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.4"	""	"94.8"	""	"97.5"	""	"123.0"	""	"137.9"	"127.6"	""	"309"	"54"	"31.000"	"24.000"	"6.60584659104201E-05"	"24"	"0"	"2.022E-06"	"1.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITPLQVVLPNTALHLK"	"[K].dITPLQVVLPNTALHLk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.9649"	"0.0000"	"1"	"1"	"1"	"777.47980"	"2330.42484"	"2330.42117"	"1.57"	"0.00122"	"17/172"	"17"	"172"	"2504908.28186035"	"HCD"	"MS2"	"11.72663"	"46.6"	"100.000"	"70.7862"	"23296"	"23296"	"23267"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.1"	""	"51.0"	""	"64.5"	""	"81.6"	"1.8"	"86.7"	"89.3"	""	"284"	"57"	"31.000"	"24.000"	"2.62596143894887E-05"	"18"	"0"	"1.332E-06"	"1.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFTGFIVEADTPGIHIGK"	"[K].aFTGFIVEADTPGIHIGk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.9811"	"0.0000"	"1"	"1"	"1"	"777.77435"	"2331.30851"	"2331.31129"	"-1.19"	"-0.00093"	"20/152"	"20"	"152"	"2432542.4967041"	"HCD"	"MS2"	"24.33017"	"71.8"	"100.000"	"66.5862"	"21642"	"21642"	"21619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.8"	""	"112.5"	""	"99.3"	""	"106.1"	""	"123.5"	"134.5"	""	"1113"	"53"	"37.000"	"30.000"	"0.000257908210833244"	"17"	"0"	"1.527E-07"	"1.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFTGFIVEADTPGIHIGK"	"[K].aFTGFIVEADTPGIHIGk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"777.77460"	"2331.30924"	"2331.31129"	"-0.88"	"-0.00068"	"18/152"	"18"	"152"	"2232688.85083008"	"HCD"	"MS2"	"20.80714"	"69.5"	"100.000"	"66.7644"	"21662"	"21662"	"21641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"102.9"	""	"95.2"	""	"103.2"	""	"100.4"	""	"124.3"	"132.6"	""	"1108"	"45"	"37.000"	"30.000"	"0.0019076986164289"	"16"	"0"	"1.736E-06"	"1.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFTGFIVEADTPGIHIGK"	"[K].aFTGFIVEADTPGIHIGk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"4"	"4"	"0.9565"	"0.0000"	"1"	"1"	"1"	"583.58356"	"2331.31240"	"2331.31129"	"0.48"	"0.00028"	"19/152"	"19"	"152"	"1751652.66662598"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"66.8196"	"21685"	"21685"	"21657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.4"	""	"49.4"	""	"54.3"	""	"59.2"	""	"76.7"	"75.5"	""	"1081"	"23"	"37.000"	"30.000"	"0.289598093385961"	"15"	"0"	"1.022E-05"	"1.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDTDDVPMILVGNK"	"[R].vkDTDDVPMILVGNk.[C]"	"N-Term(TMT6plex); K2(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"1"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"777.78955"	"2331.35410"	"2331.35608"	"-0.85"	"-0.00066"	"14/144"	"14"	"144"	"3204152.52655029"	"HCD"	"MS2"	"4.228043"	"136.5"	"100.000"	"54.8607"	"16857"	"16857"	"16837"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"248.7"	""	"219.3"	""	"206.3"	""	"136.7"	"2.2"	"246.9"	"231.5"	""	"742"	"45"	"35.000"	"28.000"	"0.00114649960546254"	"20"	"0"	"9.404E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDTDDVPMILVGNK"	"[R].vkDTDDVPMILVGNk.[C]"	"N-Term(TMT6plex); K2(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"777.79053"	"2331.35703"	"2331.35608"	"0.41"	"0.00032"	"14/144"	"14"	"144"	"8409211.86523438"	"HCD"	"MS2"	"1.925763"	"231.8"	"82.225"	"54.5851"	"16691"	"16691"	"16672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"424.1"	""	"360.6"	""	"360.2"	""	"260.9"	""	"391.2"	"395.1"	""	"731"	"34"	"35.000"	"28.000"	"0.0149584771131319"	"15"	"0"	"6.984E-06"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"778.09045"	"2332.25681"	"2332.26229"	"-2.35"	"-0.00183"	"9/170"	"9"	"170"	"149190.131713867"	"HCD"	"MS2"	"14.06719"	"9.2"	"100.000"	"78.4024"	"26445"	"26445"	"26415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.6"	""	"12.4"	""	"12.0"	""	"15.3"	""	"16.0"	"16.7"	""	"1405"	"10"	"38.000"	"31.000"	"7.82791909848189"	"21"	"0.0002277"	"0.001148"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"778.09137"	"2332.25956"	"2332.26229"	"-1.17"	"-0.00091"	"11/170"	"11"	"170"	"329029.504577637"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"75.6573"	"25336"	"25336"	"25311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.2"	""	"20.0"	""	"14.9"	""	"37.3"	""	"26.1"	"35.2"	""	"1398"	"33"	"38.000"	"31.000"	"0.0391270563445082"	""	"0.0001889"	"0.0005175"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"1166.63354"	"2332.25981"	"2332.26229"	"-1.06"	"-0.00124"	"9/170"	"9"	"170"	"104147.89276123"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"75.2102"	"25102"	"25102"	"25073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.5"	""	"7.5"	""	"8.1"	""	"30.1"	""	"15.6"	"23.0"	""	"1392"	"22"	"38.000"	"31.000"	"0.438136303268609"	"22"	"0.00109"	"0.01479"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"1166.63391"	"2332.26055"	"2332.26229"	"-0.75"	"-0.00087"	"5/170"	"5"	"170"	"99161.2831420898"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"75.2282"	"25161"	"25161"	"25135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.0"	""	"5.9"	""	"5.4"	""	"25.0"	""	"11.4"	"8.1"	""	"1391"	"26"	"38.000"	"31.000"	"0.175912675652829"	"25"	"0.0008731"	"0.009308"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.2407"	"0.0000"	"1"	"1"	"1"	"778.09192"	"2332.26120"	"2332.26229"	"-0.47"	"-0.00036"	"16/170"	"16"	"170"	"1982901.59783936"	"HCD"	"MS2"	"43.30415"	"56.6"	"100.000"	"74.9882"	"25063"	"25063"	"25039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.7"	""	"66.3"	""	"61.3"	""	"156.8"	""	"106.6"	"97.9"	""	"1396"	"54"	"38.000"	"31.000"	"0.000251105035938708"	""	"0"	"1.135E-06"	"1.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.2895"	"0.0000"	"1"	"1"	"1"	"778.09210"	"2332.26175"	"2332.26229"	"-0.23"	"-0.00018"	"12/170"	"12"	"170"	"260996.657104492"	"HCD"	"MS2"	"4.207085"	"14.7"	"100.000"	"75.7158"	"25308"	"25308"	"25281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.1"	""	"21.3"	""	"14.6"	""	"32.8"	""	"21.5"	"30.9"	""	"1392"	"38"	"38.000"	"31.000"	"0.0107302351525289"	""	"0.0001308"	"0.0002552"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.2692"	"0.0000"	"1"	"1"	"1"	"778.09210"	"2332.26175"	"2332.26229"	"-0.23"	"-0.00018"	"16/170"	"16"	"170"	"2892060.07080078"	"HCD"	"MS2"	"3.717398"	"78.9"	"100.000"	"75.0300"	"25028"	"25028"	"25009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"69.5"	""	"83.6"	""	"95.1"	""	"225.1"	""	"130.6"	"144.1"	""	"1392"	"52"	"38.000"	"31.000"	"0.00040983518412749"	""	"0"	"2.089E-06"	"1.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.2576"	"0.0000"	"1"	"1"	"1"	"778.09210"	"2332.26175"	"2332.26229"	"-0.23"	"-0.00018"	"18/170"	"18"	"170"	"3684888.81903076"	"HCD"	"MS2"	"0"	"94.5"	"100.000"	"75.2838"	"25184"	"25184"	"25167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.5"	""	"86.9"	""	"101.7"	""	"295.2"	""	"174.0"	"153.5"	""	"1392"	"66"	"38.000"	"31.000"	"1.75634261764648E-05"	""	"0"	"6.594E-07"	"1.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1166.68030"	"2332.35332"	"2332.35684"	"-1.51"	"-0.00176"	"5/148"	"5"	"148"	"111271.375549316"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"86.9970"	"29940"	"29940"	"29922"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"8.9"	""	"6.0"	""	"10.8"	""	"4.0"	"11.9"	""	"719"	"31"	"35.000"	"28.000"	"0.0312391274328425"	"15"	"0.0001889"	"0.0007372"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"778.12311"	"2332.35477"	"2332.35684"	"-0.89"	"-0.00069"	"16/148"	"16"	"148"	"1683170.38372803"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"86.9184"	"29908"	"29908"	"29894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.2"	""	"51.8"	""	"52.5"	""	"65.6"	""	"61.9"	"73.2"	""	"702"	"38"	"35.000"	"28.000"	"0.00519167044247041"	"16"	"0"	"2.005E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.8611"	"0.0000"	"1"	"1"	"1"	"583.84430"	"2332.35537"	"2332.35684"	"-0.63"	"-0.00037"	"15/148"	"15"	"148"	"1960084.91967773"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"87.3613"	"30088"	"30088"	"30075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.4"	""	"49.1"	""	"48.8"	""	"62.1"	""	"54.3"	"67.1"	""	"695"	"36"	"35.000"	"28.000"	"0.00891158202689906"	"20"	"0"	"3.783E-05"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1166.68140"	"2332.35552"	"2332.35684"	"-0.57"	"-0.00066"	"9/148"	"9"	"148"	"2114632.11096191"	"HCD"	"MS2"	"0"	"77.3"	"100.000"	"87.2334"	"29984"	"29984"	"29967"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.2"	""	"112.0"	""	"120.7"	""	"133.7"	""	"127.6"	"147.7"	""	"694"	"62"	"35.000"	"28.000"	"1.96485033296274E-05"	"16"	"0"	"7.888E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"778.12341"	"2332.35569"	"2332.35684"	"-0.50"	"-0.00039"	"8/148"	"8"	"148"	"138728.669433594"	"HCD"	"MS2"	"2.783942"	"5.1"	"100.000"	"87.9904"	"30326"	"30326"	"30315"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.5"	""	"5.4"	""	"7.3"	""	"9.6"	""	"6.9"	"9.9"	""	"692"	"16"	"35.000"	"28.000"	"0.867113801549112"	"15"	"0.0001889"	"0.0004352"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"778.12341"	"2332.35569"	"2332.35684"	"-0.50"	"-0.00039"	"14/148"	"14"	"148"	"2308024.03833008"	"HCD"	"MS2"	"1.985831"	"48.1"	"100.000"	"86.8460"	"29827"	"29827"	"29809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"53.5"	""	"58.5"	""	"81.0"	""	"91.4"	"0.3"	"82.3"	"88.3"	""	"692"	"36"	"35.000"	"28.000"	"0.00807376489549228"	"16"	"0"	"2.678E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"778.12347"	"2332.35587"	"2332.35684"	"-0.42"	"-0.00032"	"6/148"	"6"	"148"	"105920.312561035"	"HCD"	"MS2"	"9.189915"	"4.2"	"100.000"	"88.0132"	"30287"	"30287"	"30269"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.4"	""	"5.4"	""	"6.3"	""	"6.1"	""	"8.6"	"8.6"	""	"692"	"18"	"35.000"	"28.000"	"0.545853499315975"	"16"	"0.0001889"	"0.0008885"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1166.68164"	"2332.35600"	"2332.35684"	"-0.36"	"-0.00042"	"15/148"	"15"	"148"	"1743814.19451904"	"HCD"	"MS2"	"0"	"63.3"	"100.000"	"87.2967"	"30061"	"30061"	"30047"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"82.4"	""	"86.5"	""	"95.3"	""	"110.9"	""	"109.0"	"119.2"	""	"692"	"42"	"35.000"	"28.000"	"0.00222369950191689"	"15"	"0"	"0.0001372"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.8519"	"0.0000"	"1"	"1"	"1"	"583.84448"	"2332.35610"	"2332.35684"	"-0.32"	"-0.00019"	"10/148"	"10"	"148"	"1233104.57373047"	"HCD"	"MS2"	"5.32838"	"21.9"	"100.000"	"86.9198"	"29857"	"29857"	"29838"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.8"	""	"29.7"	""	"29.4"	""	"35.5"	""	"42.6"	"41.4"	""	"692"	"27"	"35.000"	"28.000"	"0.063398079014044"	"18"	"0"	"9.628E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1166.68176"	"2332.35625"	"2332.35684"	"-0.25"	"-0.00030"	"5/148"	"5"	"148"	"63062.1602172852"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"87.8259"	"30263"	"30263"	"30252"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"2.3"	""	"5.3"	""	"5.2"	""	"5.1"	"4.0"	""	"689"	"16"	"35.000"	"28.000"	"0.875365097061736"	"13"	"0.001058"	"0.01372"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1166.68176"	"2332.35625"	"2332.35684"	"-0.25"	"-0.00030"	"11/148"	"11"	"148"	"230422.630065918"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"86.9360"	"29864"	"29864"	"29838"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"10.4"	""	"13.0"	""	"16.4"	""	"16.8"	"16.1"	""	"689"	"26"	"35.000"	"28.000"	"0.0861368977104421"	"14"	"0.0001308"	"0.0002558"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.84454"	"2332.35634"	"2332.35684"	"-0.21"	"-0.00012"	"13/148"	"13"	"148"	"2035306.18609619"	"HCD"	"MS2"	"5.819676"	"32.7"	"100.000"	"87.0596"	"29965"	"29965"	"29945"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.5"	""	"45.3"	""	"53.9"	""	"54.2"	""	"50.0"	"63.7"	""	"692"	"36"	"35.000"	"28.000"	"0.00798134527297145"	"15"	"0"	"0.0001236"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1166.68188"	"2332.35649"	"2332.35684"	"-0.15"	"-0.00017"	"10/148"	"10"	"148"	"483866.697570801"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"87.5526"	"30162"	"30162"	"30158"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.5"	""	"22.4"	""	"23.0"	""	"38.9"	""	"28.5"	"39.6"	""	"693"	"26"	"35.000"	"28.000"	"0.0928331824549795"	"14"	"0.0001859"	"0.0003514"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"778.12384"	"2332.35697"	"2332.35684"	"0.05"	"0.00004"	"11/148"	"11"	"148"	"401687.534790039"	"HCD"	"MS2"	"3.257158"	"10.5"	"100.000"	"87.6862"	"30160"	"30160"	"30150"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.2"	""	"10.4"	""	"15.9"	""	"21.0"	""	"23.6"	"19.4"	""	"681"	"26"	"35.000"	"28.000"	"0.0790891879159595"	"16"	"0"	"0.0001274"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"778.12384"	"2332.35697"	"2332.35684"	"0.05"	"0.00004"	"11/148"	"11"	"148"	"632201.580993652"	"HCD"	"MS2"	"2.58865"	"13.8"	"100.000"	"87.7164"	"30223"	"30223"	"30217"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.2"	""	"17.2"	""	"19.0"	""	"27.6"	""	"20.1"	"30.6"	""	"681"	"33"	"35.000"	"28.000"	"0.0183703366966401"	"17"	"0"	"8.825E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1166.68213"	"2332.35698"	"2332.35684"	"0.06"	"0.00007"	"6/148"	"6"	"148"	"267015.34362793"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"87.5136"	"30095"	"30095"	"30088"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.0"	""	"13.5"	""	"18.4"	""	"18.4"	""	"17.5"	"19.2"	""	"681"	"24"	"35.000"	"28.000"	"0.133695600503564"	"14"	"0.0001889"	"0.0006844"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.9333"	"0.0000"	"1"	"1"	"1"	"583.84485"	"2332.35756"	"2332.35684"	"0.31"	"0.00018"	"14/148"	"14"	"148"	"2884400.15673828"	"HCD"	"MS2"	"1.683702"	"50.4"	"100.000"	"87.2266"	"29982"	"29982"	"29967"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.4"	""	"68.2"	""	"72.5"	""	"98.9"	"0.0"	"77.8"	"96.5"	""	"676"	"45"	"35.000"	"28.000"	"0.00103732943207621"	"18"	"0"	"3.018E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"778.12445"	"2332.35880"	"2332.35684"	"0.84"	"0.00065"	"17/148"	"17"	"148"	"5517164.9309082"	"HCD"	"MS2"	"0"	"93.0"	"94.627"	"87.4560"	"30126"	"30126"	"30116"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.7"	""	"121.4"	""	"129.1"	""	"178.4"	"1.0"	"153.8"	"184.8"	""	"679"	"47"	"35.000"	"28.000"	"0.000720841494849074"	"21"	"0"	"9.981E-06"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"778.12482"	"2332.35990"	"2332.35684"	"1.31"	"0.00102"	"15/148"	"15"	"148"	"3653646.28796387"	"HCD"	"MS2"	"0"	"64.5"	"100.000"	"87.4089"	"30056"	"30056"	"30041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.4"	""	"101.3"	""	"84.8"	""	"124.5"	""	"102.4"	"126.8"	""	"663"	"50"	"35.000"	"28.000"	"0.000316580042266106"	"22"	"0"	"8.707E-06"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"778.12549"	"2332.36191"	"2332.35684"	"2.17"	"0.00169"	"5/148"	"5"	"148"	"118859.024902344"	"HCD"	"MS2"	"65.5887"	"4.7"	"100.000"	"84.8452"	"29072"	"29072"	"29042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"3.7"	""	"6.4"	""	"7.8"	""	"9.7"	"12.2"	""	"650"	"6"	"35.000"	"28.000"	"7.34316625321818"	"14"	"0.002829"	"0.04593"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7833"	"0.0000"	"1"	"1"	"1"	"778.12628"	"2332.36429"	"2332.35684"	"3.19"	"0.00248"	"18/148"	"18"	"148"	"23675426.7579346"	"HCD"	"MS2"	"0"	"138.3"	"38.070"	"87.1909"	"30019"	"30019"	"30007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.5"	""	"182.0"	""	"200.1"	""	"258.3"	"1.1"	"227.0"	"263.4"	""	"626"	"60"	"34.000"	"27.000"	"3.23999498170634E-05"	""	"0"	"1.44E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYPFLPTVIDGVVLPK"	"[K].eSYPFLPTVIDGVVLPk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"778.12701"	"2332.36649"	"2332.35684"	"4.14"	"0.00322"	"18/148"	"18"	"148"	"27512674.2252197"	"HCD"	"MS2"	"0"	"151.1"	"33.411"	"87.1322"	"29944"	"29944"	"29927"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.3"	""	"215.8"	""	"225.8"	""	"277.1"	""	"229.1"	"301.2"	""	"605"	"55"	"34.000"	"27.000"	"0.000105372037798394"	"21"	"0"	"4.498E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSATFIGNSTAIQELFK"	"[K].mSATFIGnSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); N8(Deamidated); K17(TMT6plex)"	"2"	"3"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.1538"	"0.0000"	"1"	"1"	"1"	"778.42291"	"2333.25418"	"2333.24631"	"3.38"	"0.00263"	"12/170"	"12"	"170"	"241313.278564453"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"79.1889"	"26766"	"26766"	"26735"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.0"	""	"18.3"	""	"17.6"	""	"22.6"	"1.6"	"22.2"	"26.0"	""	"1471"	"26"	"38.000"	"31.000"	"0.167719159395631"	"31"	"0.0001889"	"0.000401"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEVQYLTGGLIEPDTPGR"	"[R].fLEVQYLTGGLIEPDTPGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.75537"	"2334.25156"	"2334.25428"	"-1.16"	"-0.00091"	"16/198"	"16"	"198"	"297998.190551758"	"HCD"	"MS2"	"9.742864"	"7.6"	"100.000"	"83.6935"	"28552"	"28552"	"28524"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.4"	""	"7.4"	""	"11.2"	""	"11.4"	""	"13.8"	"14.2"	""	"1413"	"54"	"38.000"	"31.000"	"0.000255336067954887"	"16"	"0"	"5.703E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEVQYLTGGLIEPDTPGR"	"[R].fLEVQYLTGGLIEPDTPGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.75562"	"2334.25229"	"2334.25428"	"-0.85"	"-0.00066"	"10/198"	"10"	"198"	"238927.199951172"	"HCD"	"MS2"	"7.798997"	"5.8"	"100.000"	"83.8265"	"28657"	"28657"	"28631"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.5"	""	"7.2"	""	"8.8"	""	"7.4"	""	"10.5"	"12.7"	""	"1411"	"18"	"38.000"	"31.000"	"1.13631049561827"	"14"	"0.0001308"	"0.000276"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLTPITYPQGLAMAK"	"[K].kLTPITYPQGLAmAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.13824"	"2335.40018"	"2335.40264"	"-1.05"	"-0.00082"	"16/146"	"16"	"146"	"3419625.74267578"	"HCD"	"MS2"	"7.740614"	"118.4"	"100.000"	"46.7256"	"13508"	"13508"	"13480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"180.9"	""	"169.0"	""	"158.5"	""	"231.9"	""	"192.0"	"189.7"	""	"377"	"29"	"32.000"	"25.000"	"0.0222490439820351"	"14"	"0"	"0.0001136"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLTPITYPQGLAMAK"	"[K].kLTPITYPQGLAmAk.[E]"	"N-Term(TMT6plex); K1(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.13892"	"2335.40219"	"2335.40264"	"-0.19"	"-0.00015"	"14/146"	"14"	"146"	"3501347.59179688"	"HCD"	"MS2"	"27.55391"	"112.7"	"100.000"	"47.0308"	"13681"	"13681"	"13650"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"186.8"	""	"155.4"	""	"173.0"	""	"180.5"	"1.8"	"186.9"	"181.0"	""	"361"	"40"	"32.000"	"25.000"	"0.00180916095473061"	"15"	"0"	"1.513E-05"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NKPLITYVGDSTVLK"	"[K].nkPLITYVGDSTVLk.[C]"	"N-Term(TMT6plex); K2(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O88775"	"Embigin OS=Rattus norvegicus OX=10116 GN=Emb PE=1 SV=1"	"O88775"	"Embigin OS=Rattus norvegicus OX=10116 GN=Emb PE=1 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"779.14337"	"2335.41556"	"2335.42039"	"-2.07"	"-0.00161"	"17/152"	"17"	"152"	"898472.143920898"	"HCD"	"MS2"	"4.978314"	"57.8"	"100.000"	"52.7260"	"15953"	"15953"	"15922"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.0"	""	"72.4"	""	"75.1"	""	"97.1"	"1.4"	"123.4"	"102.3"	""	"289"	"38"	"31.000"	"24.000"	"0.0024036312797849"	"19"	"0"	"2.469E-06"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPSLSLHGIEGAFSGSGAK"	"[R].yPSLSLHGIEGAFSGSGAk.[T]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.82184"	"2336.26552"	"2336.26507"	"0.20"	"0.00011"	"17/170"	"17"	"170"	"2371228.59417725"	"HCD"	"MS2"	"7.441975"	"66.0"	"100.000"	"59.0102"	"18496"	"18496"	"18473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.0"	""	"83.7"	""	"80.2"	""	"118.7"	"0.5"	"136.9"	"127.3"	""	"1306"	"19"	"38.000"	"31.000"	"0.862806049123833"	"14"	"0"	"2.569E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPSLSLHGIEGAFSGSGAK"	"[R].yPSLSLHGIEGAFSGSGAk.[T]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"4"	"4"	"0.8846"	"0.0000"	"1"	"1"	"1"	"584.82208"	"2336.26650"	"2336.26507"	"0.61"	"0.00036"	"19/170"	"19"	"170"	"2353640.59362793"	"HCD"	"MS2"	"22.4214"	"64.2"	"100.000"	"59.1524"	"18607"	"18607"	"18581"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.4"	""	"87.1"	""	"90.6"	""	"117.2"	"0.2"	"116.4"	"122.9"	""	"1302"	"26"	"38.000"	"31.000"	"0.168492660776466"	"17"	"0"	"4.079E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYVLPSFEVLVEPTEK"	"[K].eYVLPSFEVLVEPTEk.[F]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1169.15271"	"2337.29814"	"2337.29939"	"-0.53"	"-0.00062"	"4/148"	"4"	"148"	"95742.8382568359"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"80.9132"	"27469"	"27469"	"27438"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.4"	""	"2.1"	""	"4.3"	""	"6.3"	""	"3.9"	"4.5"	""	"1168"	"4"	"37.000"	"30.000"	"22.5638314599576"	"13"	"0.0005564"	"0.003623"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYVLPSFEVLVEPTEK"	"[K].eYVLPSFEVLVEPTEk.[F]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1169.15320"	"2337.29912"	"2337.29939"	"-0.11"	"-0.00013"	"7/148"	"7"	"148"	"106058.936340332"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"80.9253"	"27423"	"27423"	"27392"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"4.3"	""	"3.5"	""	"6.7"	""	"7.4"	"5.0"	""	"1167"	"9"	"37.000"	"30.000"	"7.03138471206945"	"13"	"0.0004166"	"0.002311"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYVLPSFEVLVEPTEK"	"[K].eYVLPSFEVLVEPTEk.[F]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.77185"	"2337.30100"	"2337.29939"	"0.69"	"0.00054"	"14/148"	"14"	"148"	"1819987.90759277"	"HCD"	"MS2"	"13.59387"	"42.0"	"100.000"	"80.9225"	"27472"	"27472"	"27454"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.4"	""	"57.2"	""	"40.6"	""	"80.7"	"0.1"	"69.7"	"63.8"	""	"1134"	"52"	"37.000"	"30.000"	"0.000394078788072848"	"16"	"0"	"7.073E-06"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYVLPSFEVLVEPTEK"	"[K].eYVLPSFEVLVEPTEk.[F]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.77228"	"2337.30228"	"2337.29939"	"1.24"	"0.00096"	"13/148"	"13"	"148"	"1927157.97241211"	"HCD"	"MS2"	"14.14908"	"44.0"	"100.000"	"80.9302"	"27425"	"27425"	"27408"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.1"	""	"58.1"	""	"43.3"	""	"68.9"	"1.7"	"77.2"	"73.6"	""	"1120"	"48"	"37.000"	"30.000"	"0.0008263956586345"	"16"	"0"	"9.086E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSFSGALTVTDGLLGGNEK"	"[R].gGSFSGALTVTDGLLGGNEk.[I]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.09021"	"2338.25608"	"2338.26546"	"-4.01"	"-0.00313"	"16/188"	"16"	"188"	"2586917.37457275"	"HCD"	"MS2"	"0"	"100.2"	"100.000"	"67.1045"	"21800"	"21800"	"21789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"148.2"	""	"132.1"	""	"166.8"	""	"141.0"	"1.4"	"165.1"	"193.3"	""	"1384"	"57"	"38.000"	"31.000"	"0.000123909925099243"	"16"	"0"	"1.942E-06"	"1.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSFSGALTVTDGLLGGNEK"	"[R].gGSFSGALTVTDGLLGGNEk.[I]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.09265"	"2338.26340"	"2338.26546"	"-0.88"	"-0.00069"	"16/188"	"16"	"188"	"2957646.98095703"	"HCD"	"MS2"	"6.652929"	"106.6"	"100.000"	"66.8721"	"21759"	"21759"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.7"	""	"144.1"	""	"156.8"	""	"167.0"	"5.7"	"174.4"	"211.8"	""	"1346"	"65"	"38.000"	"31.000"	"1.97703821577011E-05"	"17"	"0"	"1.735E-06"	"1.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIGFKPEEIQTVYK"	"[K].vIGFkPEEIQTVYk.[I]"	"N-Term(TMT6plex); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.13702"	"2338.39652"	"2338.39893"	"-1.03"	"-0.00080"	"12/130"	"12"	"130"	"2392103.72821045"	"HCD"	"MS2"	"18.91724"	"157.3"	"100.000"	"56.3159"	"17453"	"17453"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"212.9"	""	"191.1"	""	"216.0"	""	"224.1"	""	"322.3"	"327.6"	""	"345"	"6"	"32.000"	"25.000"	"3.91551686949959"	"13"	"0.0001889"	"0.001061"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIGFKPEEIQTVYK"	"[K].vIGFkPEEIQTVYk.[I]"	"N-Term(TMT6plex); K5(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.13800"	"2338.39945"	"2338.39893"	"0.22"	"0.00017"	"11/130"	"11"	"130"	"2497594.86279297"	"HCD"	"MS2"	"11.47066"	"161.6"	"100.000"	"56.0687"	"17298"	"17298"	"17275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"208.1"	""	"223.7"	""	"203.2"	""	"242.5"	"1.2"	"310.3"	"344.6"	""	"336"	"17"	"32.000"	"25.000"	"0.307828822958363"	"14"	"0.0001308"	"0.0002616"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].vHLSFSPSQSLPASQTHMR.[V]"	"N-Term(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9342"	"0.0000"	"1"	"1"	"1"	"585.55853"	"2339.21230"	"2339.21276"	"-0.20"	"-0.00012"	"17/188"	"17"	"188"	"34991954.2709961"	"HCD"	"MS2"	"2.911841"	"108.6"	"64.946"	"37.7871"	"9869"	"9869"	"9848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"153.0"	""	"162.1"	""	"157.5"	""	"174.2"	""	"201.3"	"180.9"	""	"1423"	"76"	"38.000"	"31.000"	"1.78309673353235E-06"	"22"	"0"	"8.426E-07"	"1.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].vHLSFSPSQSLPASQTHMR.[V]"	"N-Term(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9494"	"0.0000"	"1"	"1"	"1"	"585.55865"	"2339.21279"	"2339.21276"	"0.01"	"0.00001"	"18/188"	"18"	"188"	"24360111.1567993"	"HCD"	"MS2"	"23.90801"	"156.4"	"96.231"	"37.8620"	"9943"	"9943"	"9921"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"215.5"	""	"210.2"	""	"223.2"	""	"273.3"	""	"297.0"	"263.3"	""	"1415"	"79"	"38.000"	"31.000"	"9.72134697321353E-07"	"21"	"0"	"4.828E-07"	"1.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].vHLSFSPSQSLPASQTHMR.[V]"	"N-Term(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.40924"	"2339.21317"	"2339.21276"	"0.17"	"0.00013"	"19/188"	"19"	"188"	"3018198.19116211"	"HCD"	"MS2"	"0"	"47.5"	"100.000"	"37.8054"	"9877"	"9877"	"9848"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.8"	""	"40.1"	""	"33.4"	""	"97.8"	""	"140.9"	"102.2"	""	"1427"	"61"	"38.000"	"31.000"	"6.129061475941E-05"	"17"	"0"	"4.858E-07"	"1.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].vHLSFSPSQSLPASQTHMR.[V]"	"N-Term(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9833"	"0.0000"	"1"	"1"	"1"	"780.40967"	"2339.21445"	"2339.21276"	"0.72"	"0.00056"	"21/188"	"21"	"188"	"2756644.18170166"	"HCD"	"MS2"	"18.91396"	"46.6"	"100.000"	"37.9560"	"9982"	"9982"	"9953"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.9"	""	"36.1"	""	"45.2"	""	"99.9"	""	"121.0"	"109.7"	""	"1420"	"60"	"38.000"	"31.000"	"7.74922638878618E-05"	"18"	"0"	"5.051E-07"	"1.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"780.43103"	"2339.27854"	"2339.28336"	"-2.06"	"-0.00161"	"11/196"	"11"	"196"	"224582.474060059"	"HCD"	"MS2"	"18.97495"	"12.1"	"100.000"	"84.8291"	"29065"	"29065"	"29042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.9"	""	"19.8"	""	"17.5"	""	"12.5"	""	"20.2"	"24.3"	""	"1182"	"36"	"37.000"	"30.000"	"0.013384047857875"	"20"	"0"	"0.0001557"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"780.43103"	"2339.27854"	"2339.28336"	"-2.06"	"-0.00161"	"19/196"	"19"	"196"	"1549689.2520752"	"HCD"	"MS2"	"19.4319"	"42.7"	"100.000"	"84.1652"	"28795"	"28795"	"28769"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.9"	""	"84.6"	""	"64.6"	""	"54.8"	"0.3"	"61.2"	"65.8"	""	"1182"	"60"	"37.000"	"30.000"	"6.00602977486582E-05"	"20"	"0"	"2.359E-06"	"1.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9180"	"0.0000"	"1"	"1"	"1"	"780.43207"	"2339.28165"	"2339.28336"	"-0.73"	"-0.00057"	"18/196"	"18"	"196"	"907718.456359863"	"HCD"	"MS2"	"25.71532"	"31.4"	"100.000"	"84.0898"	"28713"	"28713"	"28692"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.5"	""	"59.1"	""	"51.8"	""	"35.5"	""	"42.7"	"53.7"	""	"1183"	"61"	"37.000"	"30.000"	"4.85237938471087E-05"	"22"	"0"	"9.718E-06"	"1.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"780.43219"	"2339.28202"	"2339.28336"	"-0.57"	"-0.00045"	"15/196"	"15"	"196"	"4470470.81420898"	"HCD"	"MS2"	"0"	"120.1"	"100.000"	"84.4601"	"28915"	"28915"	"28897"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.6"	""	"201.3"	""	"200.2"	""	"121.9"	""	"183.1"	"215.6"	""	"1178"	"58"	"37.000"	"30.000"	"8.5529374275918E-05"	"20"	"0"	"2.198E-06"	"1.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"4"	"4"	"0.9565"	"0.0000"	"1"	"1"	"1"	"585.57623"	"2339.28310"	"2339.28336"	"-0.11"	"-0.00006"	"12/196"	"12"	"196"	"760860.387390137"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"84.2882"	"28794"	"28794"	"28772"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"26.6"	""	"32.6"	""	"20.1"	""	"33.6"	"37.8"	""	"1168"	"46"	"37.000"	"30.000"	"0.00137534878179527"	"17"	"0"	"5.107E-05"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"1170.14526"	"2339.28325"	"2339.28336"	"-0.05"	"-0.00005"	"11/196"	"11"	"196"	"128728.184204102"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"84.2919"	"28847"	"28847"	"28817"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.8"	""	"10.8"	""	"11.4"	""	"9.3"	""	"16.4"	"14.2"	""	"1165"	"31"	"37.000"	"30.000"	"0.0485619290040937"	"17"	"0.0001308"	"0.0002648"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.43262"	"2339.28330"	"2339.28336"	"-0.03"	"-0.00002"	"12/196"	"12"	"196"	"261208.049926758"	"HCD"	"MS2"	"63.84584"	"15.0"	"100.000"	"84.7399"	"28978"	"28978"	"28955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.3"	""	"27.8"	""	"22.8"	""	"13.8"	""	"24.3"	"31.2"	""	"1165"	"40"	"37.000"	"30.000"	"0.00621292240616626"	"15"	"0"	"3.405E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"780.43280"	"2339.28385"	"2339.28336"	"0.21"	"0.00016"	"22/196"	"22"	"196"	"5274906.34631348"	"HCD"	"MS2"	"0"	"140.7"	"100.000"	"84.3849"	"28834"	"28834"	"28817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"260.4"	""	"227.6"	""	"240.0"	""	"135.7"	""	"216.9"	"252.6"	""	"1163"	"58"	"37.000"	"30.000"	"9.78474966512477E-05"	"20"	"0"	"1.01E-06"	"1.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1170.14612"	"2339.28496"	"2339.28336"	"0.68"	"0.00080"	"12/196"	"12"	"196"	"165421.448913574"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"84.2466"	"28777"	"28777"	"28756"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.1"	""	"26.7"	""	"21.4"	""	"13.3"	""	"15.6"	"19.0"	""	"1156"	"45"	"37.000"	"30.000"	"0.00194952064404826"	"15"	"0"	"4.103E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"780.43488"	"2339.29007"	"2339.28336"	"2.87"	"0.00224"	"6/196"	"6"	"196"	"117605.219299316"	"HCD"	"MS2"	"39.66724"	"5.5"	"100.000"	"86.2814"	"29651"	"29651"	"29622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"6.9"	""	"10.9"	""	"7.6"	""	"12.8"	"8.5"	""	"1139"	"8"	"37.000"	"30.000"	"9.04677373326436"	"14"	"0.00286"	"0.04915"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGnLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.75806"	"2340.25962"	"2340.26738"	"-3.32"	"-0.00259"	"6/196"	"6"	"196"	"119883.432128906"	"HCD"	"MS2"	"26.68461"	"4.7"	"100.000"	"87.2517"	"29992"	"29992"	"29967"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"8.9"	""	"6.6"	""	"4.5"	""	"6.0"	"10.9"	""	"1356"	"15"	"38.000"	"31.000"	"1.98257531217778"	"13"	"0.0006037"	"0.003689"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lnDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"780.75806"	"2340.25962"	"2340.26738"	"-3.32"	"-0.00259"	"6/196"	"6"	"196"	"119883.432128906"	"HCD"	"MS2"	"26.68461"	"4.7"	"100.000"	"87.2517"	"29992"	"29992"	"29967"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"8.9"	""	"6.6"	""	"4.5"	""	"6.0"	"10.9"	""	"1356"	"15"	"38.000"	"31.000"	"1.98257531217778"	"13"	"0.000523"	"0.002779"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGnLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.75983"	"2340.26493"	"2340.26738"	"-1.05"	"-0.00082"	"7/196"	"7"	"196"	"138399.609069824"	"HCD"	"MS2"	"13.76235"	"5.6"	"100.000"	"89.9824"	"31064"	"31064"	"31046"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"8.6"	""	"10.3"	""	"5.4"	""	"8.9"	"10.6"	""	"1320"	"22"	"38.000"	"31.000"	"0.439080283093149"	"14"	"0.0001889"	"0.0007403"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lnDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"780.75983"	"2340.26493"	"2340.26738"	"-1.05"	"-0.00082"	"7/196"	"7"	"196"	"138399.609069824"	"HCD"	"MS2"	"13.76235"	"5.6"	"100.000"	"89.9824"	"31064"	"31064"	"31046"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"8.6"	""	"10.3"	""	"5.4"	""	"8.9"	"10.6"	""	"1320"	"22"	"38.000"	"31.000"	"0.439080283093149"	"14"	"0.0001889"	"0.0006148"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGnLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.76019"	"2340.26603"	"2340.26738"	"-0.58"	"-0.00045"	"7/196"	"7"	"196"	"112777.654296875"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"87.4118"	"30108"	"30108"	"30087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"7.1"	""	"4.2"	""	"4.1"	""	"11.2"	"7.3"	""	"1323"	"17"	"38.000"	"31.000"	"1.33822718669568"	"14"	"0.0003571"	"0.001491"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lnDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"780.76019"	"2340.26603"	"2340.26738"	"-0.58"	"-0.00045"	"7/196"	"7"	"196"	"112777.654296875"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"87.4118"	"30108"	"30108"	"30087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"7.1"	""	"4.2"	""	"4.1"	""	"11.2"	"7.3"	""	"1323"	"17"	"38.000"	"31.000"	"1.33822718669568"	"14"	"0.0002277"	"0.001261"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lnDGNLMPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.0909"	"0.0000"	"1"	"1"	"1"	"780.76117"	"2340.26896"	"2340.26738"	"0.68"	"0.00053"	"9/196"	"9"	"196"	"132395.8828125"	"HCD"	"MS2"	"19.71337"	"5.5"	"100.000"	"89.8558"	"30982"	"30982"	"30963"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"7.8"	""	"5.8"	""	"7.2"	""	"8.9"	"11.0"	""	"1288"	"22"	"38.000"	"31.000"	"0.366341287463434"	"24"	"0.0001889"	"0.000776"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQFGQPEILLGTIPGAGGTQR"	"[K].aQFGQPEILLGTIPGAGGTQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"780.76715"	"2340.28690"	"2340.28731"	"-0.18"	"-0.00014"	"19/222"	"19"	"222"	"3671164.09893799"	"HCD"	"MS2"	"38.21013"	"97.7"	"100.000"	"67.2832"	"21872"	"21872"	"21857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.4"	""	"162.7"	""	"149.6"	""	"123.1"	""	"164.4"	"188.9"	""	"1186"	"40"	"37.000"	"30.000"	"0.00647224119514113"	"18"	"0"	"1.758E-07"	"1.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDALETLGFLNHYQMK"	"[K].sDALETLGFLNHYQmk.[N]"	"N-Term(TMT6plex); M15(Oxidation); K16(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"781.08075"	"2341.22770"	"2341.22624"	"0.62"	"0.00049"	"10/140"	"10"	"140"	"1442831.41156006"	"HCD"	"MS2"	"35.33466"	"77.8"	"100.000"	"60.5557"	"19127"	"19127"	"19097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.8"	""	"84.7"	""	"94.2"	""	"135.8"	"0.6"	"139.9"	"181.3"	""	"1479"	"47"	"38.000"	"31.000"	"0.00138975478602602"	"20"	"0"	"1.507E-05"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATNVEQSFMTMAAEIK"	"[K].nATNVEQSFMTMAAEIk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"0.3455"	"0.0000"	"1"	"1"	"1"	"781.74121"	"2343.20908"	"2343.20887"	"0.09"	"0.00007"	"17/184"	"17"	"184"	"786416.276733398"	"HCD"	"MS2"	"2.395309"	"29.1"	"100.000"	"79.2033"	"26771"	"26771"	"26751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.7"	""	"34.6"	""	"34.0"	""	"45.9"	"0.5"	"57.6"	"63.3"	""	"1404"	"55"	"38.000"	"31.000"	"0.000224045957428073"	""	"0"	"1.944E-06"	"1.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATNVEQSFMTMAAEIK"	"[K].nATNVEQSFMTMAAEIk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"0.5192"	"0.0000"	"1"	"1"	"1"	"781.74188"	"2343.21109"	"2343.20887"	"0.95"	"0.00074"	"16/184"	"16"	"184"	"990118.4375"	"HCD"	"MS2"	"4.866026"	"33.4"	"100.000"	"79.2129"	"26724"	"26724"	"26705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.0"	""	"32.5"	""	"35.6"	""	"51.2"	"1.0"	"72.5"	"76.1"	""	"1406"	"52"	"38.000"	"31.000"	"0.00039990361038322"	""	"0"	"1.345E-05"	"1.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATNVEQSFMTMAAEIK"	"[K].nATNVEQSFMTMAAEIk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"0.4722"	"0.0000"	"1"	"1"	"1"	"781.74335"	"2343.21549"	"2343.20887"	"2.82"	"0.00220"	"16/184"	"16"	"184"	"1636791.72088623"	"HCD"	"MS2"	"22.19569"	"36.2"	"100.000"	"79.0091"	"26692"	"26692"	"26671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.8"	""	"37.1"	""	"36.8"	""	"51.6"	""	"77.5"	"75.2"	""	"1427"	"36"	"38.000"	"31.000"	"0.016270240683723"	""	"0"	"3.233E-05"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NATNVEQSFMTMAAEIK"	"[K].nATNVEQSFMTMAAEIk.[K]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"781.74396"	"2343.21732"	"2343.20887"	"3.60"	"0.00282"	"16/184"	"16"	"184"	"1619371.15307617"	"HCD"	"MS2"	"17.18593"	"37.1"	"100.000"	"79.0607"	"26662"	"26662"	"26641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.7"	""	"40.4"	""	"38.2"	""	"52.9"	""	"86.8"	"81.8"	""	"1416"	"35"	"38.000"	"31.000"	"0.0204660135671476"	""	"0"	"3.732E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFSETFLNEMIAPVMK"	"[K].aGFSETFLNEMIAPVMk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q99ML5"	"Prenylcysteine oxidase OS=Rattus norvegicus OX=10116 GN=Pcyox1 PE=1 SV=1"	"Q99ML5"	"Prenylcysteine oxidase OS=Rattus norvegicus OX=10116 GN=Pcyox1 PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"781.75427"	"2343.24826"	"2343.24928"	"-0.43"	"-0.00034"	"12/156"	"12"	"156"	"177851.223144531"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"90.1619"	"31131"	"31131"	"31125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	"6.4"	""	"11.4"	""	"11.1"	""	"11.5"	"15.8"	""	"1390"	"33"	"38.000"	"31.000"	"0.0336499795470949"	"16"	"0.0001308"	"0.0002215"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFSETFLNEMIAPVMK"	"[K].aGFSETFLNEMIAPVMk.[V]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q99ML5"	"Prenylcysteine oxidase OS=Rattus norvegicus OX=10116 GN=Pcyox1 PE=1 SV=1"	"Q99ML5"	"Prenylcysteine oxidase OS=Rattus norvegicus OX=10116 GN=Pcyox1 PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"781.75500"	"2343.25046"	"2343.24928"	"0.50"	"0.00039"	"12/156"	"12"	"156"	"213951.278381348"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"90.0725"	"31065"	"31065"	"31055"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"9.4"	""	"12.2"	""	"12.9"	""	"14.4"	"14.3"	""	"1399"	"46"	"38.000"	"31.000"	"0.00165496082839129"	"20"	"0"	"2.564E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVASLLQSVQVPEFTPK"	"[R].aAVASLLQSVQVPEFTPk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"4"	"4"	"0.9245"	"0.0000"	"1"	"1"	"1"	"586.59753"	"2343.36831"	"2343.36880"	"-0.21"	"-0.00012"	"14/178"	"14"	"178"	"1770552.91278076"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"82.2781"	"27974"	"27974"	"27952"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.2"	""	"33.5"	""	"42.2"	""	"48.5"	"0.2"	"45.8"	"57.5"	""	"620"	"53"	"34.000"	"27.000"	"0.000150439435050258"	"20"	"0"	"7.288E-06"	"1.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVASLLQSVQVPEFTPK"	"[R].aAVASLLQSVQVPEFTPk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"4"	"4"	"0.8906"	"0.0000"	"1"	"1"	"1"	"586.59760"	"2343.36855"	"2343.36880"	"-0.11"	"-0.00006"	"15/178"	"15"	"178"	"2275141.47210693"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"82.3423"	"28051"	"28051"	"28030"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.4"	""	"38.4"	""	"53.1"	""	"67.3"	"1.2"	"65.3"	"61.1"	""	"619"	"64"	"34.000"	"27.000"	"1.35725250961358E-05"	"24"	"0"	"6.332E-06"	"1.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDITYPAGFMDVISIDK"	"[R].tDITYPAGFMDVISIDk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"1172.62866"	"2344.25005"	"2344.25106"	"-0.43"	"-0.00050"	"3/158"	"3"	"158"	"68182.7437744141"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"82.4321"	"28088"	"28088"	"28062"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"5.6"	""	"7.1"	""	"3.2"	""	"6.9"	"6.3"	""	"1420"	"2"	"38.000"	"31.000"	"42.3895053474524"	"13"	"0.001966"	"0.02886"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDITYPAGFMDVISIDK"	"[R].tDITYPAGFMDVISIDk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"782.08820"	"2344.25003"	"2344.25106"	"-0.44"	"-0.00034"	"14/158"	"14"	"158"	"2241796.84472656"	"HCD"	"MS2"	"42.20359"	"49.6"	"100.000"	"82.2960"	"28032"	"28032"	"28014"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.3"	""	"78.0"	""	"86.0"	""	"64.8"	""	"77.8"	"85.9"	""	"1420"	"41"	"38.000"	"31.000"	"0.00569191425005252"	"18"	"0"	"3.815E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDITYPAGFMDVISIDK"	"[R].tDITYPAGFMDVISIDk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"782.08862"	"2344.25132"	"2344.25106"	"0.11"	"0.00009"	"14/158"	"14"	"158"	"2515325.96087646"	"HCD"	"MS2"	"36.28077"	"56.0"	"100.000"	"82.3102"	"27987"	"27987"	"27968"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.8"	""	"98.5"	""	"102.8"	""	"66.5"	""	"92.5"	"93.7"	""	"1389"	"37"	"38.000"	"31.000"	"0.0152641368164906"	"16"	"0"	"1.762E-05"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAVTFIGNSTAIQELFK"	"[K].mAVTFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"782.10419"	"2344.29801"	"2344.29868"	"-0.28"	"-0.00022"	"16/166"	"16"	"166"	"2452304.8684082"	"HCD"	"MS2"	"20.05161"	"49.9"	"100.000"	"80.7339"	"27345"	"27345"	"27328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.2"	""	"48.8"	""	"54.9"	""	"167.0"	"0.7"	"85.9"	"75.9"	""	"1159"	"41"	"37.000"	"30.000"	"0.00432567055498633"	"18"	"0"	"8.775E-06"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAVTFIGNSTAIQELFK"	"[K].mAVTFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"782.10431"	"2344.29837"	"2344.29868"	"-0.13"	"-0.00010"	"17/166"	"17"	"166"	"1893058.10070801"	"HCD"	"MS2"	"19.74174"	"40.2"	"100.000"	"80.7655"	"27408"	"27408"	"27390"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.9"	""	"32.4"	""	"36.6"	""	"140.2"	""	"78.9"	"64.7"	""	"1163"	"47"	"37.000"	"30.000"	"0.00104123730412152"	"17"	"0"	"3.149E-06"	"1.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLIDVSLLSPEQLQYLNR"	"[R].nLIDVSLLSPEQLQYLNR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"782.10590"	"2344.30313"	"2344.30738"	"-1.81"	"-0.00141"	"16/184"	"16"	"184"	"815460.856323242"	"HCD"	"MS2"	"34.56327"	"18.2"	"100.000"	"82.2014"	"27994"	"27994"	"27966"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.2"	""	"24.4"	""	"33.6"	""	"22.9"	""	"29.2"	"35.1"	""	"1105"	"25"	"37.000"	"30.000"	"0.168784391505157"	"16"	"0"	"2.438E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLIDVSLLSPEQLQYLNR"	"[R].nLIDVSLLSPEQLQYLNR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.10693"	"2344.30625"	"2344.30738"	"-0.48"	"-0.00038"	"15/184"	"15"	"184"	"1588512.24438477"	"HCD"	"MS2"	"48.00552"	"34.6"	"100.000"	"82.2365"	"27957"	"27957"	"27936"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.1"	""	"57.8"	""	"56.8"	""	"46.6"	""	"59.4"	"58.2"	""	"1104"	"17"	"37.000"	"30.000"	"1.09885168312093"	"14"	"0"	"4.404E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLIDVSLLSPEQLQYLNR"	"[R].nLIDVSLLSPEQLQYLNR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"782.10754"	"2344.30808"	"2344.30738"	"0.30"	"0.00023"	"15/184"	"15"	"184"	"684344.155090332"	"HCD"	"MS2"	"21.4847"	"14.7"	"100.000"	"82.1718"	"27931"	"27931"	"27904"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.7"	""	"24.2"	""	"26.2"	""	"23.4"	""	"27.8"	"25.6"	""	"1071"	"27"	"37.000"	"30.000"	"0.106355382824487"	"16"	"0"	"2.343E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAVTFIGNSTAIQELFK"	"[K].mAVTFIGNSTAIqELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); Q13(Deamidated); K17(TMT6plex)"	"1"	"1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P69897"	"Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"782.43848"	"2345.30088"	"2345.28269"	"7.75"	"0.00606"	"15/166"	"15"	"166"	"2103353.2822876"	"HCD"	"MS2"	"15.51204"	"42.7"	"100.000"	"80.6622"	"27315"	"27315"	"27296"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.0"	""	"44.7"	""	"50.8"	""	"119.0"	""	"74.8"	"67.8"	""	"1171"	"24"	"37.000"	"30.000"	"0.255580019776617"	"14"	"0.0001889"	"0.0006435"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPWLAEMTSPVISVK"	"[K].mPTPWLAEMTSPVISVk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"782.43854"	"2345.30106"	"2345.30132"	"-0.11"	"-0.00009"	"13/152"	"13"	"152"	"451555.329956055"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"85.0563"	"29107"	"29107"	"29083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.9"	""	"23.6"	""	"22.0"	""	"21.2"	""	"23.9"	"32.6"	""	"1170"	"56"	"37.000"	"30.000"	"0.00015964520029427"	"18"	"0"	"2.738E-05"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPWLAEMTSPVISVK"	"[K].mPTPWLAEMTSPVISVk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"782.43872"	"2345.30161"	"2345.30132"	"0.12"	"0.00010"	"13/152"	"13"	"152"	"544833.425292969"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"85.1386"	"29191"	"29191"	"29170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.1"	""	"26.3"	""	"23.3"	""	"23.5"	""	"24.2"	"28.7"	""	"1169"	"50"	"37.000"	"30.000"	"0.000551803582189123"	"19"	"0"	"1.732E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDTEDVPMILVGNK"	"[R].vkDTEDVPMILVGNk.[C]"	"N-Term(TMT6plex); K2(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"1"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"782.46222"	"2345.37210"	"2345.37173"	"0.16"	"0.00013"	"18/144"	"18"	"144"	"4348651.55279541"	"HCD"	"MS2"	"0"	"144.8"	"100.000"	"55.0304"	"16927"	"16927"	"16901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"250.2"	""	"201.3"	""	"201.2"	""	"159.6"	""	"292.0"	"268.5"	""	"630"	"45"	"34.000"	"27.000"	"0.000984715000644046"	"16"	"0"	"3.044E-06"	"1.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDTEDVPMILVGNK"	"[R].vkDTEDVPMILVGNk.[C]"	"N-Term(TMT6plex); K2(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.46283"	"2345.37394"	"2345.37173"	"0.94"	"0.00074"	"16/144"	"16"	"144"	"3793520.56665039"	"HCD"	"MS2"	"0"	"136.8"	"100.000"	"54.8933"	"16817"	"16817"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.5"	""	"212.3"	""	"198.9"	""	"158.9"	"0.1"	"265.0"	"241.7"	""	"616"	"29"	"34.000"	"27.000"	"0.0417398339004119"	"14"	"0"	"2.051E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDTEDVPMILVGNK"	"[R].vkDTEDVPMILVGNk.[C]"	"N-Term(TMT6plex); K2(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.09930"	"2345.37539"	"2345.37173"	"1.56"	"0.00091"	"8/144"	"8"	"144"	"3922789.8807373"	"HCD"	"MS2"	"15.36008"	"91.5"	"100.000"	"54.9162"	"16827"	"16827"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.3"	""	"120.6"	""	"127.8"	""	"122.2"	"4.1"	"172.4"	"169.2"	""	"600"	"16"	"34.000"	"27.000"	"0.74151724350484"	"14"	"0.0001889"	"0.0004102"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDSDPITVVLPEEVSK"	"[K].lFDSDPITVVLPEEVSk.[D]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"782.77747"	"2346.31784"	"2346.32085"	"-1.28"	"-0.00100"	"13/154"	"13"	"154"	"200170.713256836"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"83.2515"	"28371"	"28371"	"28351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.3"	""	"13.7"	""	"11.4"	""	"13.5"	"1.3"	"20.2"	"20.0"	""	"1103"	"48"	"37.000"	"30.000"	"0.000828982794298647"	"19"	"0"	"1.871E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDSDPITVVLPEEVSK"	"[K].lFDSDPITVVLPEEVSk.[D]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"782.77826"	"2346.32022"	"2346.32085"	"-0.27"	"-0.00021"	"15/154"	"15"	"154"	"414028.125061035"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"83.2050"	"28403"	"28403"	"28381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.9"	""	"14.5"	""	"15.6"	""	"23.4"	"0.9"	"31.3"	"29.5"	""	"1079"	"48"	"37.000"	"30.000"	"0.000816566293531333"	"18"	"0"	"1.179E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASVLNTEPALDSELTSK"	"[R].lASVLNTEPALDSELTSk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.77844"	"2346.32077"	"2346.31683"	"1.68"	"0.00132"	"19/188"	"19"	"188"	"1488250.4017334"	"HCD"	"MS2"	"25.19758"	"62.6"	"100.000"	"68.8181"	"22544"	"22544"	"22522"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"92.0"	""	"82.5"	""	"83.7"	""	"100.5"	""	"122.8"	"115.7"	""	"1074"	"45"	"37.000"	"30.000"	"0.00187057138174338"	"15"	"0"	"1.178E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDFEHFLPMLQTVAK"	"[K].vLDFEHFLPMLQTVAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.78076"	"2346.32773"	"2346.32958"	"-0.79"	"-0.00062"	"9/148"	"9"	"148"	"116715.009521484"	"HCD"	"MS2"	"3.605743"	"4.6"	"100.000"	"90.6333"	"31298"	"31298"	"31293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"5.2"	""	"5.9"	""	"7.0"	""	"6.7"	"11.5"	""	"976"	"20"	"36.000"	"29.000"	"0.514540805438934"	"14"	"0.0001889"	"0.0005419"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDFEHFLPMLQTVAK"	"[K].vLDFEHFLPMLQTVAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.78082"	"2346.32792"	"2346.32958"	"-0.71"	"-0.00056"	"12/148"	"12"	"148"	"212114.985351563"	"HCD"	"MS2"	"2.566559"	"6.3"	"100.000"	"90.9051"	"31394"	"31394"	"31381"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.4"	""	"6.7"	""	"9.9"	""	"11.7"	""	"12.3"	"12.3"	""	"975"	"27"	"36.000"	"29.000"	"0.102795622309248"	"14"	"0.0001859"	"0.0003312"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDFEHFLPMLQTVAK"	"[K].vLDFEHFLPMLQTVAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.78088"	"2346.32810"	"2346.32958"	"-0.63"	"-0.00049"	"9/148"	"9"	"148"	"153692.978637695"	"HCD"	"MS2"	"17.90554"	"4.7"	"100.000"	"91.0607"	"31420"	"31420"	"31412"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.3"	""	"5.9"	""	"7.4"	""	"7.1"	""	"8.5"	"10.0"	""	"977"	"9"	"36.000"	"29.000"	"6.49926983182298"	"13"	"0.0003839"	"0.001565"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDFEHFLPMLQTVAK"	"[K].vLDFEHFLPMLQTVAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"782.78143"	"2346.32975"	"2346.32958"	"0.07"	"0.00005"	"13/148"	"13"	"148"	"224017.064331055"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"90.7523"	"31309"	"31309"	"31300"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.4"	""	"12.5"	""	"13.0"	""	"13.3"	""	"11.2"	"14.8"	""	"952"	"47"	"36.000"	"29.000"	"0.000854293206372282"	"17"	"0"	"1.646E-05"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDFEHFLPMLQTVAK"	"[K].vLDFEHFLPMLQTVAk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.78186"	"2346.33103"	"2346.32958"	"0.62"	"0.00048"	"9/148"	"9"	"148"	"158622.585571289"	"HCD"	"MS2"	"4.371033"	"5.6"	"100.000"	"90.4630"	"31210"	"31210"	"31195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.8"	""	"8.5"	""	"5.9"	""	"11.1"	""	"11.2"	"13.3"	""	"947"	"17"	"36.000"	"29.000"	"1.01232504937931"	"14"	"0.0002277"	"0.001136"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIQLNDTHPALSIPELMR"	"[K].vAIQLNDTHPALSIPELMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.9080"	"0.0000"	"1"	"1"	"1"	"783.10431"	"2347.29837"	"2347.30052"	"-0.91"	"-0.00071"	"18/192"	"18"	"192"	"1145393.77166748"	"HCD"	"MS2"	"0"	"30.0"	"100.000"	"66.4868"	"21602"	"21602"	"21571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"45.2"	""	"44.0"	""	"48.2"	""	"40.7"	"0.5"	"56.9"	"48.2"	""	"1161"	"87"	"37.000"	"30.000"	"1.21563228062144E-07"	"26"	"0"	"2.781E-06"	"1.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIQLNDTHPALSIPELMR"	"[K].vAIQLNDTHPALSIPELMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"783.10492"	"2347.30021"	"2347.30052"	"-0.13"	"-0.00010"	"10/192"	"10"	"192"	"1608267.08813477"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"66.6998"	"21636"	"21636"	"21609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.3"	""	"71.0"	""	"58.1"	""	"71.4"	""	"77.4"	"68.4"	""	"1159"	"39"	"37.000"	"30.000"	"0.0076569082001112"	"16"	"0"	"1.047E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDTDDVPMILVGNK"	"[R].vkDTDDVPmILVGNk.[C]"	"N-Term(TMT6plex); K2(TMT6plex); M9(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.12085"	"2347.34800"	"2347.35099"	"-1.28"	"-0.00100"	"13/144"	"13"	"144"	"3012319.93218994"	"HCD"	"MS2"	"0"	"144.8"	"100.000"	"48.1970"	"14110"	"14110"	"14080"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.7"	""	"190.3"	""	"148.4"	""	"278.0"	""	"266.2"	"255.0"	""	"763"	"44"	"35.000"	"28.000"	"0.00146384314155304"	"15"	"0.0001889"	"0.0006383"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDTDDVPMILVGNK"	"[R].vkDTDDVPmILVGNk.[C]"	"N-Term(TMT6plex); K2(TMT6plex); M9(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"Q62636"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.12213"	"2347.35184"	"2347.35099"	"0.36"	"0.00028"	"11/144"	"11"	"144"	"3779297.66107178"	"HCD"	"MS2"	"29.31985"	"196.9"	"100.000"	"48.4994"	"14281"	"14281"	"14255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"286.0"	"3.0"	"259.5"	""	"212.9"	""	"349.2"	"0.4"	"388.4"	"368.3"	""	"745"	"27"	"35.000"	"28.000"	"0.0755311813021677"	"14"	"0.0001889"	"0.0008137"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVLPVSGPVPWGIEVPGVIR"	"[R].fVLPVSGPVPWGIEVPGVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQS3"	"Protein OSCP1 OS=Rattus norvegicus OX=10116 GN=Oscp1 PE=2 SV=1"	"Q4QQS3"	"Protein OSCP1 OS=Rattus norvegicus OX=10116 GN=Oscp1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.12891"	"2347.37217"	"2347.37394"	"-0.76"	"-0.00059"	"6/168"	"6"	"168"	"82917.5700073242"	"HCD"	"MS2"	"25.00625"	"0.9"	"100.000"	"98.4180"	"33730"	"33730"	"33725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.3"	""	"2.4"	""	""	""	"4.7"	""	""	"556"	"17"	"34.000"	"27.000"	"0.588904395599083"	"14"	"0.0005564"	"0.00334"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KKPEYLEGLPEK"	"[R].kkPEYLEGLPEk.[M]"	"N-Term(TMT6plex); K1(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.15027"	"2347.43625"	"2347.44068"	"-1.89"	"-0.00148"	"9/124"	"9"	"124"	"1018586.05108643"	"HCD"	"MS2"	"0"	"80.6"	"100.000"	"38.2367"	"10054"	"10054"	"10023"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.7"	""	"98.9"	""	"107.0"	""	"119.1"	"1.1"	"150.2"	"140.7"	""	"259"	"13"	"31.000"	"24.000"	"0.658066478115926"	"13"	"0.0001308"	"0.0003071"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KKPEYLEGLPEK"	"[R].kkPEYLEGLPEk.[M]"	"N-Term(TMT6plex); K1(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.61530"	"2347.43935"	"2347.44068"	"-0.57"	"-0.00033"	"4/124"	"4"	"124"	"49039400.0046387"	"HCD"	"MS2"	"1.567232"	"299.7"	"21.381"	"38.2119"	"10043"	"10043"	"10023"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"522.5"	""	"411.4"	""	"423.7"	""	"408.1"	""	"551.4"	"521.1"	""	"254"	"11"	"31.000"	"24.000"	"1.04665540606651"	"14"	"0.0006037"	"0.005127"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSSTFIGNSTAIQELFK"	"[K].mSSTFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q4QRB4"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1"	"Q4QRB4"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"783.42297"	"2348.25437"	"2348.25720"	"-1.21"	"-0.00095"	"12/170"	"12"	"170"	"419477.726135254"	"HCD"	"MS2"	"27.42659"	"19.6"	"100.000"	"77.1316"	"25875"	"25875"	"25849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.8"	""	"14.1"	""	"17.8"	""	"48.6"	""	"46.2"	"41.4"	""	"1481"	"21"	"38.000"	"31.000"	"0.561726694309111"	"23"	"0.0001889"	"0.0006748"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSSTFIGNSTAIQELFK"	"[K].mSSTFIGNSTAIQELFk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q4QRB4"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1"	"Q4QRB4"	"Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"783.42371"	"2348.25656"	"2348.25720"	"-0.27"	"-0.00021"	"13/170"	"13"	"170"	"374129.308837891"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"76.9645"	"25858"	"25858"	"25829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.6"	""	"7.1"	""	"12.5"	""	"47.0"	""	"45.2"	"33.5"	""	"1468"	"39"	"38.000"	"31.000"	"0.00913473725040197"	"17"	"0"	"0.0001121"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPPPTELLDLQPLPVSALR"	"[K].yPPPTELLDLQPLPVSALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"783.45093"	"2348.33823"	"2348.34270"	"-1.90"	"-0.00149"	"3/182"	"3"	"182"	"93662.7806396484"	"HCD"	"MS2"	"36.89976"	"4.9"	"100.000"	"84.8383"	"29069"	"29069"	"29042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"8.1"	""	"6.2"	""	"8.7"	""	"9.4"	"10.3"	""	"866"	"0"	"36.000"	"29.000"	"42.9030232138568"	"13"	"0.0006737"	"0.006463"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPPPTELLDLQPLPVSALR"	"[K].yPPPTELLDLQPLPVSALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.45319"	"2348.34500"	"2348.34270"	"0.98"	"0.00077"	"10/182"	"10"	"182"	"233308.752258301"	"HCD"	"MS2"	"7.147584"	"4.3"	"100.000"	"85.3724"	"29236"	"29236"	"29211"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.4"	""	"9.0"	""	"3.2"	""	"6.9"	""	"8.5"	"7.7"	""	"787"	"14"	"35.000"	"28.000"	"1.42542619876971"	"13"	"0.0001889"	"0.0004933"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPPPTELLDLQPLPVSALR"	"[K].yPPPTELLDLQPLPVSALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.45538"	"2348.35160"	"2348.34270"	"3.79"	"0.00297"	"13/182"	"13"	"182"	"217451.564025879"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"85.4111"	"29302"	"29302"	"29282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.7"	""	"3.5"	""	"4.8"	""	"5.2"	""	"7.9"	"9.4"	""	"751"	"18"	"35.000"	"28.000"	"0.542762633915096"	"14"	"0.0004166"	"0.002213"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSTAEGPQLRPLGPAVGK"	"[R].vLSTAEGPQLRPLGPAVGk.[T]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.47388"	"2348.40708"	"2348.40659"	"0.21"	"0.00016"	"16/170"	"16"	"170"	"908166.916320801"	"HCD"	"MS2"	"32.31993"	"68.8"	"100.000"	"48.1625"	"14144"	"14144"	"14114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"94.6"	""	"83.8"	""	"103.2"	""	"114.2"	""	"125.5"	"131.3"	""	"390"	"50"	"32.000"	"25.000"	"0.000176617857175149"	"16"	"0"	"1.155E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSTAEGPQLRPLGPAVGK"	"[R].vLSTAEGPQLRPLGPAVGk.[T]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.47443"	"2348.40873"	"2348.40659"	"0.91"	"0.00071"	"18/170"	"18"	"170"	"1311713.70355225"	"HCD"	"MS2"	"3.87218"	"92.3"	"100.000"	"47.7843"	"13941"	"13941"	"13912"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.6"	""	"104.0"	""	"137.6"	""	"152.0"	""	"170.4"	"175.7"	""	"383"	"50"	"32.000"	"25.000"	"0.000182460465410529"	"16"	"0"	"1.295E-05"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQDLEMYGVNYFSIK"	"[K].iAQDLEMYGVNYFSIk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"783.75574"	"2349.25266"	"2349.25648"	"-1.62"	"-0.00127"	"15/166"	"15"	"166"	"310383.561950684"	"HCD"	"MS2"	"55.54243"	"10.3"	"100.000"	"86.3551"	"29681"	"29681"	"29654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.6"	""	"14.3"	""	"16.2"	""	"18.1"	""	"15.9"	"18.2"	""	"1422"	"53"	"38.000"	"31.000"	"0.000391624272144242"	"20"	"0"	"6.085E-06"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQDLEMYGVNYFSIK"	"[K].iAQDLEMYGVNYFSIk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"783.75775"	"2349.25870"	"2349.25648"	"0.95"	"0.00074"	"15/166"	"15"	"166"	"604161.467346191"	"HCD"	"MS2"	"11.35086"	"21.4"	"100.000"	"86.3056"	"29608"	"29608"	"29585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.6"	""	"33.0"	""	"32.5"	""	"31.5"	""	"37.4"	"39.6"	""	"1388"	"49"	"38.000"	"31.000"	"0.000832452516385669"	"18"	"0"	"1.725E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMSGGLAEVPGLSINFAK"	"[K].sLMSGGLAEVPGLSINFAk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"783.77905"	"2349.32260"	"2349.32522"	"-1.11"	"-0.00087"	"18/176"	"18"	"176"	"716369.048583984"	"HCD"	"MS2"	"18.70056"	"18.7"	"100.000"	"81.4859"	"27702"	"27702"	"27678"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.5"	""	"32.9"	""	"31.6"	""	"18.4"	""	"33.6"	"35.7"	""	"990"	"44"	"36.000"	"29.000"	"0.00214094346362329"	"25"	"0"	"2.13E-06"	"1.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMSGGLAEVPGLSINFAK"	"[K].sLMSGGLAEVPGLSINFAk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"783.77905"	"2349.32260"	"2349.32522"	"-1.11"	"-0.00087"	"14/176"	"14"	"176"	"840839.537475586"	"HCD"	"MS2"	"11.41849"	"23.3"	"100.000"	"81.5000"	"27657"	"27657"	"27632"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.7"	""	"36.3"	""	"32.9"	""	"24.2"	""	"46.2"	"49.1"	""	"990"	"40"	"36.000"	"29.000"	"0.00493861531592164"	"21"	"0"	"1.778E-06"	"1.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMSGGLAEVPGLSINFAK"	"[K].sLMSGGLAEVPGLSINFAk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"783.77936"	"2349.32352"	"2349.32522"	"-0.73"	"-0.00057"	"6/176"	"6"	"176"	"137305.212219238"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"81.8158"	"27837"	"27837"	"27806"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.0"	""	"10.1"	""	"8.3"	""	"11.5"	""	"13.9"	"16.6"	""	"979"	"11"	"36.000"	"29.000"	"3.59544538462907"	"16"	"0.0003839"	"0.001942"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEDPIMGFHQMFLLK"	"[K].aDEDPIMGFHQMFLLk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"0"	"3"	"3"	"0.8548"	"0.0000"	"1"	"1"	"1"	"784.08215"	"2350.23191"	"2350.23397"	"-0.88"	"-0.00069"	"14/134"	"14"	"134"	"1765141.08685303"	"HCD"	"MS2"	"3.602676"	"74.1"	"100.000"	"74.6007"	"24905"	"24905"	"24879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.7"	""	"102.5"	""	"91.1"	""	"96.1"	""	"136.3"	"159.3"	""	"1423"	"62"	"38.000"	"31.000"	"4.32688053409808E-05"	"25"	"0"	"4.638E-06"	"1.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEDPIMGFHQMFLLK"	"[K].aDEDPIMGFHQMFLLk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"P61972"	"Nuclear transport factor 2 OS=Rattus norvegicus OX=10116 GN=Nutf2 PE=1 SV=1"	"0"	"3"	"3"	"0.9559"	"0.0000"	"1"	"1"	"1"	"784.08301"	"2350.23447"	"2350.23397"	"0.21"	"0.00017"	"15/134"	"15"	"134"	"1919783.11334229"	"HCD"	"MS2"	"0"	"79.9"	"100.000"	"74.6355"	"24867"	"24867"	"24849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.2"	""	"117.0"	""	"123.1"	""	"107.8"	""	"146.7"	"151.7"	""	"1429"	"68"	"38.000"	"31.000"	"1.16145458598372E-05"	"20"	"0"	"6.652E-06"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTVSESSPENGKESIVK"	"[K].tVTVSESSPEnGKESIVk.[F]"	"N-Term(TMT6plex); N11(Deamidated); K18(TMT6plex)"	"1"	"1"	"Q920R4"	"G-protein coupled receptor-associated sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Gprasp1 PE=1 SV=1"	"Q920R4"	"G-protein coupled receptor-associated sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Gprasp1 PE=1 SV=1"	"1"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"784.09570"	"2350.27256"	"2350.27536"	"-1.19"	"-0.00093"	"4/178"	"4"	"178"	"251489.383239746"	"HCD"	"MS2"	"13.7455"	"10.4"	"100.000"	"89.7212"	"30929"	"30929"	"30915"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.0"	""	"10.0"	""	"15.8"	""	"18.6"	""	"19.6"	"26.9"	""	"1322"	"9"	"38.000"	"31.000"	"7.55442579296039"	"17"	"0.004913"	"0.147"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTVSESSPENGKESIVK"	"[K].tVTVSESSPEnGKESIVk.[F]"	"N-Term(TMT6plex); N11(Deamidated); K18(TMT6plex)"	"1"	"1"	"Q920R4"	"G-protein coupled receptor-associated sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Gprasp1 PE=1 SV=1"	"Q920R4"	"G-protein coupled receptor-associated sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Gprasp1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.09619"	"2350.27402"	"2350.27536"	"-0.57"	"-0.00045"	"4/178"	"4"	"178"	"199222.46496582"	"HCD"	"MS2"	"20.58862"	"8.6"	"100.000"	"89.8214"	"31003"	"31003"	"30998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"9.1"	""	"8.4"	""	"16.8"	""	"22.7"	"17.7"	""	"1316"	"3"	"38.000"	"31.000"	"30.6355649538107"	"15"	"0.005975"	"0.2029"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTVSESSPENGKESIVK"	"[K].TVTVSESSPEnGkESIVk.[F]"	"N11(Deamidated); K13(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q920R4"	"G-protein coupled receptor-associated sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Gprasp1 PE=1 SV=1"	"Q920R4"	"G-protein coupled receptor-associated sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Gprasp1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"784.09619"	"2350.27402"	"2350.27536"	"-0.57"	"-0.00045"	"5/178"	"5"	"178"	"199222.46496582"	"HCD"	"MS2"	"20.58862"	"8.6"	"100.000"	"89.8214"	"31003"	"31003"	"30998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"9.1"	""	"8.4"	""	"16.8"	""	"22.7"	"17.7"	""	"1316"	"3"	"38.000"	"31.000"	"35.9936503584233"	"15"	"0.009705"	"0.4379"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTGIAAMSVMRPELIMK"	"[K].sGTGIAAMSVMRPELIMk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P63081"	"V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus OX=10116 GN=Atp6v0c PE=2 SV=1"	"P63081"	"V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus OX=10116 GN=Atp6v0c PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.10638"	"2350.30460"	"2350.30609"	"-0.63"	"-0.00050"	"17/174"	"17"	"174"	"1443983.69226074"	"HCD"	"MS2"	"21.51837"	"102.4"	"100.000"	"60.6572"	"19168"	"19168"	"19145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.0"	""	"144.5"	""	"140.1"	""	"134.7"	""	"174.3"	"200.5"	""	"1079"	"29"	"37.000"	"30.000"	"0.061374992070174"	"14"	"0"	"2.21E-06"	"1.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTGIAAMSVMRPELIMK"	"[K].sGTGIAAMSVMRPELIMk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P63081"	"V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus OX=10116 GN=Atp6v0c PE=2 SV=1"	"P63081"	"V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus OX=10116 GN=Atp6v0c PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.10712"	"2350.30680"	"2350.30609"	"0.30"	"0.00024"	"15/174"	"15"	"174"	"1450206.80291748"	"HCD"	"MS2"	"14.24639"	"101.7"	"100.000"	"60.7931"	"19277"	"19277"	"19251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.9"	""	"165.8"	""	"156.2"	""	"122.3"	""	"165.2"	"192.8"	""	"1064"	"27"	"37.000"	"30.000"	"0.106637911855827"	"14"	"0"	"4.071E-05"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVPVIADGGIQNVGHIAK"	"[R].fGVPVIADGGIQNVGHIAk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.12634"	"2350.36448"	"2350.36472"	"-0.10"	"-0.00008"	"15/158"	"15"	"158"	"2197255.03375244"	"HCD"	"MS2"	"15.09823"	"92.6"	"100.000"	"60.5854"	"19192"	"19192"	"19171"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"173.9"	""	"133.1"	""	"124.1"	""	"131.0"	""	"155.2"	"159.7"	""	"633"	"57"	"35.000"	"28.000"	"6.75108715010892E-05"	"16"	"0"	"9.303E-07"	"1.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVPVIADGGIQNVGHIAK"	"[R].fGVPVIADGGIQNVGHIAk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.12689"	"2350.36612"	"2350.36472"	"0.60"	"0.00047"	"20/158"	"20"	"158"	"2877170.02624512"	"HCD"	"MS2"	"12.02619"	"106.1"	"100.000"	"60.3806"	"19055"	"19055"	"19033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"195.4"	""	"139.5"	""	"144.1"	""	"157.0"	""	"189.2"	"179.2"	""	"630"	"71"	"34.000"	"27.000"	"2.65650448695747E-06"	"17"	"0"	"3.027E-07"	"1.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILYMMDEINNPVLTVK"	"[R].iLYMMDEINNPVLTVk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"784.44183"	"2351.31095"	"2351.31188"	"-0.40"	"-0.00031"	"11/150"	"11"	"150"	"136819.51574707"	"HCD"	"MS2"	"17.02612"	"6.2"	"100.000"	"88.5685"	"30544"	"30544"	"30528"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.7"	""	"11.2"	""	"9.5"	""	"10.1"	""	"10.7"	"7.2"	""	"1031"	"39"	"37.000"	"30.000"	"0.00661041415359179"	"20"	"0.0001889"	"0.0004006"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILYMMDEINNPVLTVK"	"[R].iLYMMDEINNPVLTVk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"784.44312"	"2351.31479"	"2351.31188"	"1.24"	"0.00097"	"11/150"	"11"	"150"	"148690.95526123"	"HCD"	"MS2"	"28.62882"	"5.5"	"100.000"	"88.3867"	"30432"	"30432"	"30414"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.5"	""	"8.9"	""	"8.2"	""	"8.2"	""	"6.8"	"16.1"	""	"1014"	"30"	"37.000"	"30.000"	"0.0459206428655387"	"18"	"0"	"0.0001608"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].NLHPLNELFPLAYIEDPk.[M]"	"K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"784.76416"	"2352.27793"	"2352.28010"	"-0.92"	"-0.00072"	"14/188"	"14"	"188"	"2020619.95336914"	"HCD"	"MS2"	"10.31002"	"57.8"	"100.000"	"75.3076"	"25141"	"25141"	"25121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.4"	""	"108.3"	""	"61.3"	""	"118.7"	"0.6"	"80.7"	"88.2"	""	"1315"	"35"	"38.000"	"31.000"	"0.0206488446622361"	"25"	"0"	"3.275E-05"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].NLHPLNELFPLAYIEDPk.[M]"	"K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"784.76440"	"2352.27866"	"2352.28010"	"-0.61"	"-0.00048"	"13/188"	"13"	"188"	"1956925.71630859"	"HCD"	"MS2"	"4.121426"	"53.8"	"100.000"	"75.3345"	"25204"	"25204"	"25183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.9"	""	"104.4"	""	"57.7"	""	"98.3"	"0.3"	"75.5"	"96.8"	""	"1309"	"33"	"38.000"	"31.000"	"0.0366361350178549"	"24"	"0"	"2.829E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISFPAVQAAPSFSNSFPK"	"[K].iSFPAVQAAPSFSNSFPk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"785.10254"	"2353.29306"	"2353.29564"	"-1.09"	"-0.00086"	"17/184"	"17"	"184"	"1619571.6741333"	"HCD"	"MS2"	"19.65482"	"57.7"	"100.000"	"72.2967"	"23913"	"23913"	"23889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.3"	""	"76.1"	""	"79.1"	""	"81.9"	"0.6"	"113.0"	"100.9"	""	"1222"	"58"	"37.000"	"30.000"	"0.000107162098662532"	"19"	"0"	"4.296E-06"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISFPAVQAAPSFSNSFPK"	"[K].iSFPAVQAAPSFSNSFPk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.7973"	"0.0000"	"1"	"1"	"1"	"785.10333"	"2353.29544"	"2353.29564"	"-0.08"	"-0.00006"	"17/184"	"17"	"184"	"1628683.78973389"	"HCD"	"MS2"	"0"	"42.0"	"100.000"	"72.3158"	"23972"	"23972"	"23951"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.5"	""	"49.1"	""	"71.2"	""	"63.6"	"2.4"	"76.0"	"70.5"	""	"1205"	"74"	"37.000"	"30.000"	"2.28011657292049E-06"	""	"0"	"3.79E-06"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISFPAVQAAPSFSNSFPK"	"[K].iSFPAVQAAPSFSNSFPk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"785.10449"	"2353.29892"	"2353.29564"	"1.40"	"0.00109"	"16/184"	"16"	"184"	"492780.781738281"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"72.6196"	"24045"	"24045"	"24017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.0"	""	"27.6"	""	"30.6"	""	"39.0"	""	"41.7"	"42.3"	""	"1159"	"53"	"37.000"	"30.000"	"0.000276091756853738"	"18"	"0"	"4.248E-06"	"1.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNAHEHFVTSLDFHK"	"[K].tLNAHEHFVTSLDFHk.[T]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"5"	"5"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.65887"	"2354.26527"	"2354.26574"	"-0.20"	"-0.00009"	"11/170"	"11"	"170"	"6600263.04766846"	"HCD"	"MS2"	"7.124498"	"190.1"	"100.000"	"38.9114"	"10374"	"10374"	"10350"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.8"	""	"224.4"	""	"226.9"	""	"372.4"	"0.8"	"376.4"	"380.9"	""	"1415"	"33"	"38.000"	"31.000"	"0.0325631525808809"	"15"	"0"	"3.15E-06"	"1.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDVDTLDMVFLDHWK"	"[K].yDVDTLDMVFLDHWk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"785.74017"	"2355.20597"	"2355.20953"	"-1.51"	"-0.00119"	"8/132"	"8"	"132"	"175163.150634766"	"HCD"	"MS2"	"35.95416"	"8.1"	"100.000"	"83.2647"	"28428"	"28428"	"28397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.7"	""	"10.3"	""	"11.7"	""	"11.9"	""	"13.9"	"15.9"	""	"1360"	"7"	"38.000"	"31.000"	"14.1419374723051"	"15"	"0.0009404"	"0.009781"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"785.76160"	"2355.27024"	"2355.27827"	"-3.41"	"-0.00268"	"14/196"	"14"	"196"	"226261.519958496"	"HCD"	"MS2"	"25.36311"	"12.2"	"100.000"	"79.9277"	"27067"	"27067"	"27039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.7"	""	"17.5"	""	"17.3"	""	"19.9"	""	"25.2"	"20.4"	""	"1274"	"26"	"38.000"	"31.000"	"0.169878896930018"	"16"	"7.476E-05"	"0.0001967"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"1178.13916"	"2355.27104"	"2355.27827"	"-3.07"	"-0.00362"	"9/196"	"9"	"196"	"110058.988586426"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"74.2915"	"24779"	"24779"	"24751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.2"	""	"7.6"	""	"11.1"	""	"20.2"	""	"10.1"	"11.1"	""	"1265"	"20"	"38.000"	"31.000"	"0.626701205144675"	"15"	"0.0001889"	"0.0007143"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1178.14160"	"2355.27593"	"2355.27827"	"-1.00"	"-0.00117"	"9/196"	"9"	"196"	"112002.404541016"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"74.2342"	"24704"	"24704"	"24673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"7.7"	""	"10.2"	""	"15.6"	""	"9.7"	"5.1"	""	"1258"	"20"	"37.000"	"30.000"	"0.567088245554148"	"14"	"0.001058"	"0.01452"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9608"	"0.0000"	"1"	"1"	"1"	"785.76392"	"2355.27719"	"2355.27827"	"-0.46"	"-0.00036"	"17/196"	"17"	"196"	"826626.802246094"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"74.4694"	"24851"	"24851"	"24831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.5"	""	"45.2"	""	"52.3"	""	"65.9"	"0.8"	"49.7"	"45.4"	""	"1261"	"51"	"37.000"	"31.000"	"0.000541608025309152"	"18"	"0"	"7.894E-06"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9683"	"0.0000"	"1"	"1"	"1"	"785.76398"	"2355.27738"	"2355.27827"	"-0.38"	"-0.00030"	"19/196"	"19"	"196"	"2935601.76965332"	"HCD"	"MS2"	"3.319823"	"79.1"	"100.000"	"74.1139"	"24706"	"24706"	"24687"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"109.1"	""	"104.0"	""	"120.4"	""	"181.3"	"0.7"	"112.2"	"119.1"	""	"1257"	"63"	"37.000"	"30.000"	"3.17910800068957E-05"	"19"	"0"	"7.21E-06"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"785.76410"	"2355.27774"	"2355.27827"	"-0.23"	"-0.00018"	"19/196"	"19"	"196"	"3574178.38311768"	"HCD"	"MS2"	"6.463708"	"95.3"	"100.000"	"74.1328"	"24662"	"24662"	"24641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"142.2"	""	"128.9"	""	"155.0"	""	"222.5"	""	"126.5"	"128.5"	""	"1257"	"66"	"37.000"	"30.000"	"1.49040837400835E-05"	"19"	"0"	"2.285E-06"	"1.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"785.76434"	"2355.27848"	"2355.27827"	"0.09"	"0.00007"	"10/196"	"10"	"196"	"165524.137939453"	"HCD"	"MS2"	"6.71593"	"7.7"	"100.000"	"84.7906"	"28999"	"28999"	"28971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.6"	""	"14.2"	""	"11.3"	""	"8.3"	""	"14.4"	"15.7"	""	"1258"	"31"	"37.000"	"30.000"	"0.0554179741122041"	"19"	"0.0001889"	"0.0009364"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"785.76434"	"2355.27848"	"2355.27827"	"0.09"	"0.00007"	"12/196"	"12"	"196"	"474827.805664063"	"HCD"	"MS2"	"0"	"25.1"	"100.000"	"74.5665"	"24839"	"24839"	"24817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.0"	""	"29.5"	""	"38.0"	""	"49.8"	"0.3"	"40.6"	"46.5"	""	"1258"	"25"	"37.000"	"30.000"	"0.201674340511394"	"19"	"0"	"6.534E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"785.76471"	"2355.27958"	"2355.27827"	"0.55"	"0.00043"	"10/196"	"10"	"196"	"229962.212036133"	"HCD"	"MS2"	"15.33664"	"13.0"	"100.000"	"78.5110"	"26489"	"26489"	"26463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.0"	""	"19.8"	""	"18.0"	""	"19.4"	""	"19.7"	"25.7"	""	"1256"	"25"	"37.000"	"30.000"	"0.179870376510133"	"19"	"0.0001889"	"0.0005982"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"785.76483"	"2355.27994"	"2355.27827"	"0.71"	"0.00056"	"4/196"	"4"	"196"	"134403.059814453"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"84.9513"	"29115"	"29115"	"29090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.6"	""	"6.1"	""	"8.1"	""	"9.7"	""	"8.3"	"8.8"	""	"1246"	"10"	"37.000"	"30.000"	"6.28764548025775"	"16"	"0.0008731"	"0.008718"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"785.76569"	"2355.28250"	"2355.27827"	"1.80"	"0.00141"	"11/196"	"11"	"196"	"227796.175598145"	"HCD"	"MS2"	"12.02412"	"14.9"	"100.000"	"79.1058"	"26732"	"26732"	"26703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.8"	""	"23.2"	""	"21.7"	""	"23.0"	""	"19.0"	"29.4"	""	"1236"	"31"	"37.000"	"30.000"	"0.0496579143510712"	"16"	"0.0001859"	"0.0003649"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"785.76746"	"2355.28781"	"2355.27827"	"4.05"	"0.00318"	"15/196"	"15"	"196"	"237940.738525391"	"HCD"	"MS2"	"16.6272"	"15.6"	"100.000"	"79.1944"	"26717"	"26717"	"26689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.4"	""	"23.1"	""	"24.0"	""	"27.3"	""	"22.6"	"25.7"	""	"1233"	"25"	"37.000"	"30.000"	"0.210830326309702"	"20"	"0.0001889"	"0.0003983"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLETLWGGPANLEAIAK"	"[R].dVLETLWGGPANLEAIAk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6AYG5"	"Ethylmalonyl-CoA decarboxylase OS=Rattus norvegicus OX=10116 GN=Echdc1 PE=1 SV=1"	"Q6AYG5"	"Ethylmalonyl-CoA decarboxylase OS=Rattus norvegicus OX=10116 GN=Echdc1 PE=1 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"785.78156"	"2355.33011"	"2355.33242"	"-0.98"	"-0.00077"	"12/174"	"12"	"174"	"140721.030700684"	"HCD"	"MS2"	"2.506235"	"6.6"	"100.000"	"88.6853"	"30549"	"30549"	"30537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.7"	""	"7.9"	""	"8.2"	""	"10.3"	""	"15.6"	"14.5"	""	"913"	"37"	"36.000"	"29.000"	"0.00923508255066631"	"17"	"0"	"6.624E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLETLWGGPANLEAIAK"	"[R].dVLETLWGGPANLEAIAk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6AYG5"	"Ethylmalonyl-CoA decarboxylase OS=Rattus norvegicus OX=10116 GN=Echdc1 PE=1 SV=1"	"Q6AYG5"	"Ethylmalonyl-CoA decarboxylase OS=Rattus norvegicus OX=10116 GN=Echdc1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"785.78186"	"2355.33103"	"2355.33242"	"-0.59"	"-0.00046"	"11/174"	"11"	"174"	"90216.0360717773"	"HCD"	"MS2"	"4.888307"	"4.0"	"100.000"	"88.8369"	"30648"	"30648"	"30636"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.5"	""	"4.2"	""	"6.1"	""	"8.5"	""	"5.8"	"11.2"	""	"901"	"35"	"36.000"	"29.000"	"0.0159475802158087"	"19"	"0.0001889"	"0.0004941"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lnDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N2(Deamidated); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.2353"	"0.0000"	"1"	"1"	"1"	"786.09326"	"2356.26523"	"2356.26229"	"1.25"	"0.00098"	"11/196"	"11"	"196"	"204848.076477051"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"79.5846"	"26876"	"26876"	"26849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.2"	""	"19.2"	""	"17.4"	""	"23.1"	""	"14.7"	"21.8"	""	"1322"	"34"	"38.000"	"31.000"	"0.0276185872353417"	"17"	"0.0001889"	"0.0008855"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lnDGNLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N2(Deamidated); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.2115"	"0.0000"	"1"	"1"	"1"	"786.09363"	"2356.26633"	"2356.26229"	"1.71"	"0.00135"	"15/196"	"15"	"196"	"326321.196105957"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"79.4477"	"26871"	"26871"	"26847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.7"	""	"21.8"	""	"19.7"	""	"28.4"	""	"27.8"	"22.6"	""	"1328"	"52"	"38.000"	"31.000"	"0.000402872922846768"	"17"	"0"	"6.134E-06"	"1.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lNDGnLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N5(Deamidated); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.09772"	"2356.27860"	"2356.26229"	"6.92"	"0.00544"	"7/196"	"7"	"196"	"215312.264648438"	"HCD"	"MS2"	"55.69864"	"8.4"	"100.000"	"84.0543"	"28750"	"28750"	"28725"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"11.1"	""	"12.7"	""	"12.7"	""	"14.6"	"14.3"	""	"1250"	"1"	"37.000"	"30.000"	"47.5203923087615"	"13"	"0.009489"	"0.4246"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMVLVPSQLYTETPEK"	"[K].yMVLVPSQLYTETPEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1178.64551"	"2356.28374"	"2356.28744"	"-1.57"	"-0.00185"	"12/152"	"12"	"152"	"370704.338989258"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"70.3951"	"23188"	"23188"	"23162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.0"	""	"20.1"	""	"19.9"	""	"22.0"	""	"17.1"	"26.4"	""	"1229"	"31"	"37.000"	"30.000"	"0.0543903542241048"	"14"	"0.0001308"	"0.0002259"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMVLVPSQLYTETPEK"	"[K].yMVLVPSQLYTETPEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.09961"	"2356.28427"	"2356.28744"	"-1.34"	"-0.00106"	"15/152"	"15"	"152"	"2810872.8092041"	"HCD"	"MS2"	"14.03372"	"77.0"	"100.000"	"70.3457"	"23116"	"23116"	"23091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.6"	""	"101.1"	""	"91.1"	""	"112.8"	"1.0"	"111.2"	"127.9"	""	"1238"	"45"	"37.000"	"30.000"	"0.00186935011492885"	"16"	"0"	"4.551E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMVLVPSQLYTETPEK"	"[K].yMVLVPSQLYTETPEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"1178.64624"	"2356.28520"	"2356.28744"	"-0.95"	"-0.00112"	"11/152"	"11"	"152"	"260118.684143066"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"70.5004"	"23179"	"23179"	"23155"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.6"	""	"11.3"	""	"16.0"	""	"12.5"	""	"13.8"	"15.7"	""	"1227"	"37"	"37.000"	"30.000"	"0.0123541982729058"	"18"	"0.0001889"	"0.0003807"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMVLVPSQLYTETPEK"	"[K].yMVLVPSQLYTETPEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"589.82678"	"2356.28530"	"2356.28744"	"-0.91"	"-0.00054"	"9/152"	"9"	"152"	"2401228.29284668"	"HCD"	"MS2"	"22.00375"	"47.8"	"100.000"	"70.4242"	"23148"	"23148"	"23123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"96.0"	""	"65.8"	""	"52.4"	""	"85.6"	"0.1"	"78.2"	"73.2"	""	"1226"	"34"	"37.000"	"30.000"	"0.0231985304431578"	"17"	"0"	"8.514E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMVLVPSQLYTETPEK"	"[K].yMVLVPSQLYTETPEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"786.09998"	"2356.28537"	"2356.28744"	"-0.88"	"-0.00069"	"15/152"	"15"	"152"	"2748376.63110352"	"HCD"	"MS2"	"12.87975"	"73.6"	"100.000"	"70.2245"	"23118"	"23118"	"23098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"179.6"	""	"92.5"	""	"98.0"	""	"108.7"	""	"100.2"	"115.8"	""	"1228"	"43"	"37.000"	"30.000"	"0.00280006666394096"	"16"	"0"	"8.621E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMVLVPSQLYTETPEK"	"[K].yMVLVPSQLYTETPEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.8913"	"0.0000"	"1"	"1"	"1"	"589.82697"	"2356.28603"	"2356.28744"	"-0.60"	"-0.00035"	"13/152"	"13"	"152"	"3102240.35516357"	"HCD"	"MS2"	"7.216705"	"51.7"	"100.000"	"70.3189"	"23157"	"23157"	"23130"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.1"	""	"60.5"	""	"56.1"	""	"86.0"	"1.9"	"83.5"	"85.8"	""	"1230"	"46"	"37.000"	"30.000"	"0.00162882758524312"	"21"	"0"	"4.547E-05"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMVLVPSQLYTETPEK"	"[K].yMVLVPSQLYTETPEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"786.10059"	"2356.28720"	"2356.28744"	"-0.10"	"-0.00008"	"15/152"	"15"	"152"	"5718539.64038086"	"HCD"	"MS2"	"0"	"124.3"	"100.000"	"70.5289"	"23243"	"23243"	"23226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"306.9"	""	"165.3"	""	"146.5"	""	"187.9"	""	"174.0"	"192.3"	""	"1229"	"40"	"37.000"	"30.000"	"0.00621615574642707"	"16"	"0"	"6.173E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMVLVPSQLYTETPEK"	"[K].yMVLVPSQLYTETPEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"786.10120"	"2356.28904"	"2356.28744"	"0.68"	"0.00053"	"14/152"	"14"	"152"	"5047539.25604248"	"HCD"	"MS2"	"0"	"110.2"	"100.000"	"70.6455"	"23238"	"23238"	"23219"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"273.6"	""	"145.3"	""	"139.8"	""	"167.2"	""	"149.7"	"164.2"	""	"1207"	"43"	"37.000"	"30.000"	"0.00323353282809301"	"20"	"0"	"9.386E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPYPYDDPFSLMTDPK"	"[K].lPYPYDDPFSLMTDPk.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"786.40851"	"2357.21097"	"2357.21394"	"-1.26"	"-0.00099"	"11/136"	"11"	"136"	"417637.228759766"	"HCD"	"MS2"	"27.80261"	"14.4"	"100.000"	"84.0689"	"28705"	"28705"	"28676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.3"	""	"23.8"	""	"18.6"	""	"18.8"	""	"28.1"	"25.6"	""	"1316"	"11"	"38.000"	"31.000"	"5.60048829137164"	"18"	"0.0001889"	"0.0005262"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNDGNLMPVLGFGTFASK"	"[K].lnDGnLmPVLGFGTFASk.[E]"	"N-Term(TMT6plex); N2(Deamidated); N5(Deamidated); M7(Oxidation); K18(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.40900"	"2357.21244"	"2357.24631"	"-14.37"	"-0.01129"	"14/196"	"14"	"196"	"1090077.71502686"	"HCD"	"MS2"	"22.12032"	"30.4"	"100.000"	"84.1975"	"28808"	"28808"	"28785"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.7"	""	"51.3"	""	"43.6"	""	"38.8"	""	"49.3"	"53.4"	""	"1321"	"26"	"38.000"	"31.000"	"0.158078505710576"	"14"	"0.002981"	"0.05753"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPLEANPEVTNQFLK"	"[R].wLPLEANPEVTNQFLk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"786.44672"	"2357.32560"	"2357.32694"	"-0.57"	"-0.00045"	"10/150"	"10"	"150"	"1658604.99066162"	"HCD"	"MS2"	"20.04017"	"57.3"	"100.000"	"80.9966"	"27503"	"27503"	"27486"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.9"	""	"68.3"	""	"67.0"	""	"93.9"	"2.2"	"104.0"	"110.2"	""	"1048"	"22"	"37.000"	"30.000"	"0.335221053792907"	"18"	"0"	"0.0001283"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSHK"	"[K].lGLDFPNLPYLIDGSHk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"4"	"4"	"0.9600"	"0.0000"	"1"	"1"	"1"	"590.08691"	"2357.32583"	"2357.32694"	"-0.47"	"-0.00028"	"17/170"	"17"	"170"	"4724237.5871582"	"HCD"	"MS2"	"2.288379"	"67.2"	"100.000"	"80.2926"	"27216"	"27216"	"27199"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.7"	""	"100.1"	""	"107.2"	""	"105.9"	""	"103.1"	"121.3"	""	"1037"	"50"	"37.000"	"30.000"	"0.000545442231577341"	"18"	"0"	"3.394E-06"	"1.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPLEANPEVTNQFLK"	"[R].wLPLEANPEVTNQFLk.[Q]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"786.44714"	"2357.32688"	"2357.32694"	"-0.03"	"-0.00002"	"9/150"	"9"	"150"	"1435154.56799316"	"HCD"	"MS2"	"19.38567"	"47.5"	"100.000"	"81.0477"	"27473"	"27473"	"27456"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.8"	""	"52.2"	""	"56.6"	""	"79.3"	"1.6"	"93.9"	"89.0"	""	"1034"	"20"	"37.000"	"30.000"	"0.578749385752517"	"16"	"0"	"0.0001543"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSHK"	"[K].lGLDFPNLPYLIDGSHk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.44714"	"2357.32688"	"2357.32694"	"-0.03"	"-0.00002"	"21/170"	"21"	"170"	"9240767.04901123"	"HCD"	"MS2"	"0"	"141.5"	"67.621"	"80.3877"	"27203"	"27203"	"27185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"211.9"	""	"203.8"	""	"232.5"	""	"209.1"	"0.4"	"229.5"	"251.3"	""	"1034"	"71"	"37.000"	"30.000"	"3.97640437628177E-06"	"17"	"0"	"4.979E-07"	"1.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSHK"	"[K].lGLDFPNLPYLIDGSHk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"3"	"3"	"0.9206"	"0.0000"	"1"	"1"	"1"	"786.44714"	"2357.32688"	"2357.32694"	"-0.03"	"-0.00002"	"18/170"	"18"	"170"	"12097423.2258301"	"HCD"	"MS2"	"0"	"155.7"	"56.904"	"80.3362"	"27233"	"27233"	"27215"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"233.7"	""	"234.1"	""	"249.0"	""	"233.6"	""	"245.2"	"278.0"	""	"1034"	"63"	"37.000"	"30.000"	"2.4070801035137E-05"	"22"	"0"	"8.681E-07"	"1.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSHK"	"[K].lGLDFPNLPYLIDGSHk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.44720"	"2357.32706"	"2357.32694"	"0.05"	"0.00004"	"17/170"	"17"	"170"	"740288.816223145"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"80.7061"	"27333"	"27333"	"27312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.5"	""	"33.4"	""	"41.3"	""	"43.7"	"0.3"	"43.6"	"47.5"	""	"1033"	"49"	"37.000"	"30.000"	"0.000668452152108917"	"16"	"0"	"1.238E-06"	"1.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSHK"	"[K].lGLDFPNLPYLIDGSHk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"4"	"4"	"0.9804"	"0.0000"	"1"	"1"	"1"	"590.08722"	"2357.32705"	"2357.32694"	"0.05"	"0.00003"	"16/170"	"16"	"170"	"4143132.51202393"	"HCD"	"MS2"	"5.759061"	"60.7"	"100.000"	"80.1940"	"27124"	"27124"	"27105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.9"	""	"88.7"	""	"93.3"	""	"101.4"	""	"98.0"	"104.3"	""	"1033"	"51"	"37.000"	"30.000"	"0.00042960598777453"	"17"	"0"	"3.074E-06"	"1.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSHK"	"[K].lGLDFPNLPYLIDGSHk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.44727"	"2357.32724"	"2357.32694"	"0.13"	"0.00010"	"16/170"	"16"	"170"	"653587.072692871"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"80.6920"	"27378"	"27378"	"27358"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.5"	""	"36.1"	""	"35.8"	""	"36.5"	""	"37.1"	"42.4"	""	"1029"	"47"	"37.000"	"30.000"	"0.000923390451005334"	"15"	"0"	"5.455E-06"	"1.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSHK"	"[K].lGLDFPNLPYLIDGSHk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.44763"	"2357.32834"	"2357.32694"	"0.60"	"0.00047"	"17/170"	"17"	"170"	"2701063.79083252"	"HCD"	"MS2"	"0"	"75.1"	"100.000"	"80.0833"	"27079"	"27079"	"27057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"118.3"	""	"111.0"	""	"116.2"	""	"121.3"	""	"117.8"	"126.6"	""	"1014"	"63"	"37.000"	"30.000"	"2.67921742650016E-05"	"16"	"0"	"2.483E-06"	"1.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDFPNLPYLIDGSHK"	"[K].lGLDFPNLPYLIDGSHk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.44873"	"2357.33164"	"2357.32694"	"1.99"	"0.00157"	"18/170"	"18"	"170"	"2268740.19494629"	"HCD"	"MS2"	"3.488977"	"59.9"	"100.000"	"80.0456"	"27115"	"27115"	"27087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.4"	""	"85.7"	""	"104.6"	""	"88.8"	""	"99.1"	"97.3"	""	"990"	"62"	"36.000"	"29.000"	"2.96213739554858E-05"	"16"	"0"	"2.264E-06"	"1.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMQEEIFGPILPIVSVK"	"[K].vMQEEIFGPILPIVSVk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.6757"	"0.0000"	"1"	"1"	"1"	"786.46722"	"2357.38712"	"2357.39185"	"-2.01"	"-0.00158"	"8/178"	"8"	"178"	"167993.590698242"	"HCD"	"MS2"	"14.45687"	"4.7"	"100.000"	"92.3764"	"31895"	"31895"	"31887"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"6.3"	""	"5.5"	""	"7.6"	""	"9.2"	"10.3"	""	"571"	"37"	"34.000"	"27.000"	"0.00600628744553329"	"27"	"0.0004166"	"0.002292"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMQEEIFGPILPIVSVK"	"[K].vMQEEIFGPILPIVSVk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"786.46790"	"2357.38913"	"2357.39185"	"-1.15"	"-0.00090"	"11/178"	"11"	"178"	"149602.680908203"	"HCD"	"MS2"	"8.623163"	"4.9"	"100.000"	"91.8420"	"31712"	"31712"	"31701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.6"	""	"6.0"	""	"9.1"	""	"5.7"	""	"8.8"	"8.6"	""	"566"	"45"	"34.000"	"27.000"	"0.000818062406709429"	"19"	"0.0001859"	"0.0003304"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMQEEIFGPILPIVSVK"	"[K].vMQEEIFGPILPIVSVk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1179.19836"	"2357.38945"	"2357.39185"	"-1.02"	"-0.00120"	"4/178"	"4"	"178"	"59992.7248535156"	"HCD"	"MS2"	"0"	"1.5"	"100.000"	"91.9813"	"31758"	"31758"	"31750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"3.7"	""	"4.1"	""	""	""	"4.1"	"2.6"	""	"566"	"2"	"34.000"	"27.000"	"17.2896593048277"	"13"	"0.006533"	"0.2399"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMQEEIFGPILPIVSVK"	"[K].vMQEEIFGPILPIVSVk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"786.46838"	"2357.39060"	"2357.39185"	"-0.53"	"-0.00042"	"10/178"	"10"	"178"	"151029.124938965"	"HCD"	"MS2"	"11.53134"	"4.2"	"100.000"	"91.6852"	"31630"	"31630"	"31618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"4.8"	""	"6.3"	""	"3.2"	""	"9.0"	"10.0"	""	"566"	"32"	"34.000"	"27.000"	"0.0172896593048277"	"21"	"0.0001889"	"0.0003843"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMQEEIFGPILPIVSVK"	"[K].vMQEEIFGPILPIVSVk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"786.46857"	"2357.39115"	"2357.39185"	"-0.30"	"-0.00023"	"13/178"	"13"	"178"	"788895.081481934"	"HCD"	"MS2"	"1.20269"	"19.2"	"100.000"	"92.1167"	"31803"	"31803"	"31797"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"29.6"	""	"24.6"	""	"27.2"	""	"22.6"	""	"34.9"	"44.3"	""	"559"	"45"	"34.000"	"27.000"	"0.000966900561024012"	"19"	"0"	"3.891E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMQEEIFGPILPIVSVK"	"[K].vMQEEIFGPILPIVSVk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"786.46863"	"2357.39133"	"2357.39185"	"-0.22"	"-0.00017"	"11/178"	"11"	"178"	"128467.293579102"	"HCD"	"MS2"	"7.2432"	"4.7"	"100.000"	"92.2078"	"31815"	"31815"	"31809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"5.5"	""	"5.2"	""	"9.2"	""	"8.7"	"10.4"	""	"560"	"37"	"34.000"	"27.000"	"0.00499066054885464"	"20"	"0.0001859"	"0.0003248"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMQEEIFGPILPIVSVK"	"[K].vMQEEIFGPILPIVSVk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"786.46887"	"2357.39206"	"2357.39185"	"0.09"	"0.00007"	"14/178"	"14"	"178"	"914401.868164063"	"HCD"	"MS2"	"1.558484"	"22.2"	"100.000"	"91.9431"	"31721"	"31721"	"31716"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.1"	""	"35.4"	""	"30.2"	""	"27.6"	""	"41.7"	"45.2"	""	"559"	"60"	"34.000"	"27.000"	"2.63865014921916E-05"	"22"	"0"	"2.062E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNLNLLDNWDTLGSTVGR"	"[K].qLNLNLLDNWDTLGSTVGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"1179.63196"	"2358.25664"	"2358.26149"	"-2.06"	"-0.00242"	"6/196"	"6"	"196"	"63440.4884033203"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"85.2178"	"29173"	"29173"	"29147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"4.9"	""	""	""	"4.0"	""	"7.4"	"8.0"	""	"1369"	"12"	"38.000"	"31.000"	"4.09612736818789"	"15"	"0.0006037"	"0.004736"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNLNLLDNWDTLGSTVGR"	"[K].qLNLNLLDNWDTLGSTVGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1179.63367"	"2358.26006"	"2358.26149"	"-0.61"	"-0.00072"	"5/196"	"5"	"196"	"98681.794921875"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"85.3185"	"29265"	"29265"	"29234"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.2"	""	"6.5"	""	"3.8"	""	"7.2"	""	"6.0"	"8.2"	""	"1360"	"15"	"38.000"	"31.000"	"2.09656780616956"	"13"	"0.0001889"	"0.0007919"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNLNLLDNWDTLGSTVGR"	"[K].qLNLNLLDNWDTLGSTVGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"786.75836"	"2358.26053"	"2358.26149"	"-0.41"	"-0.00032"	"12/196"	"12"	"196"	"186432.707519531"	"HCD"	"MS2"	"3.783395"	"5.9"	"100.000"	"85.4855"	"29281"	"29281"	"29268"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.4"	""	"10.7"	""	"11.3"	""	"6.4"	""	"12.1"	"8.0"	""	"1358"	"52"	"38.000"	"31.000"	"0.000461179266547068"	"19"	"0"	"1.521E-05"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNLNLLDNWDTLGSTVGR"	"[K].qLNLNLLDNWDTLGSTVGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"786.75848"	"2358.26090"	"2358.26149"	"-0.25"	"-0.00020"	"21/196"	"21"	"196"	"650834.610107422"	"HCD"	"MS2"	"43.59634"	"12.8"	"100.000"	"85.2564"	"29239"	"29239"	"29218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.6"	""	"16.4"	""	"20.6"	""	"16.5"	""	"27.9"	"24.3"	""	"1364"	"49"	"38.000"	"31.000"	"0.000854642281310044"	"18"	"0"	"3.589E-07"	"1.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNLNLLDNWDTLGSTVGR"	"[K].qLNLNLLDNWDTLGSTVGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"786.75885"	"2358.26200"	"2358.26149"	"0.22"	"0.00017"	"5/196"	"5"	"196"	"118417.977966309"	"HCD"	"MS2"	"4.084752"	"4.0"	"100.000"	"85.5696"	"29363"	"29363"	"29342"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	"6.2"	""	"6.2"	""	"7.2"	""	"7.8"	"7.1"	""	"1349"	"22"	"38.000"	"31.000"	"0.42265105172149"	"15"	"0.0001308"	"0.0002658"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNLNLLDNWDTLGSTVGR"	"[K].qLNLNLLDNWDTLGSTVGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.75970"	"2358.26456"	"2358.26149"	"1.30"	"0.00102"	"20/196"	"20"	"196"	"784720.438903809"	"HCD"	"MS2"	"31.99065"	"12.6"	"100.000"	"85.1994"	"29165"	"29165"	"29147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.5"	""	"20.5"	""	"16.1"	""	"20.3"	""	"21.2"	"27.0"	""	"1355"	"59"	"38.000"	"31.000"	"8.58834139118691E-05"	"16"	"0"	"5.294E-07"	"1.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTSAVPNLFVPLNTNPK"	"[R].tSTSAVPNLFVPLNTNPk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.78510"	"2358.34073"	"2358.34332"	"-1.10"	"-0.00086"	"16/184"	"16"	"184"	"2324198.33856201"	"HCD"	"MS2"	"5.533191"	"72.0"	"100.000"	"64.5847"	"20825"	"20825"	"20803"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.8"	""	"81.3"	""	"85.8"	""	"130.8"	"1.2"	"158.6"	"138.9"	""	"923"	"28"	"36.000"	"29.000"	"0.0780138489953367"	"14"	"0"	"9.774E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTSAVPNLFVPLNTNPK"	"[R].tSTSAVPNLFVPLNTNPk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.78595"	"2358.34330"	"2358.34332"	"-0.01"	"-0.00001"	"19/184"	"19"	"184"	"2265780.79650879"	"HCD"	"MS2"	"12.80113"	"74.6"	"100.000"	"64.6135"	"20784"	"20784"	"20761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.6"	""	"79.0"	""	"83.7"	""	"149.9"	""	"161.0"	"149.2"	""	"907"	"32"	"36.000"	"29.000"	"0.0294155715614126"	"14"	"0"	"9.382E-06"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPIPSLEAIYLLSPTEK"	"[R].ePIPSLEAIYLLSPTEk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.78986"	"2358.35501"	"2358.35724"	"-0.94"	"-0.00074"	"15/158"	"15"	"158"	"426234.667419434"	"HCD"	"MS2"	"3.729221"	"11.5"	"100.000"	"85.1432"	"29193"	"29193"	"29170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.9"	""	"16.6"	""	"13.6"	""	"15.6"	""	"21.1"	"27.1"	""	"865"	"39"	"36.000"	"29.000"	"0.00605321517012658"	"15"	"0"	"3.165E-05"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPIPSLEAIYLLSPTEK"	"[R].ePIPSLEAIYLLSPTEk.[S]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.79120"	"2358.35904"	"2358.35724"	"0.77"	"0.00060"	"15/158"	"15"	"158"	"510195.274475098"	"HCD"	"MS2"	"11.02912"	"12.7"	"100.000"	"85.1279"	"29136"	"29136"	"29115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.9"	""	"11.1"	""	"14.8"	""	"22.2"	"0.8"	"23.9"	"28.1"	""	"818"	"22"	"36.000"	"29.000"	"0.231591869216646"	"14"	"0"	"0.0001498"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLDPMGGIVMTNDGNAILR"	"[K].mLLDPMGGIVMTNDGNAILR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"787.41492"	"2360.23020"	"2360.23376"	"-1.51"	"-0.00119"	"10/186"	"10"	"186"	"102040.112365723"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"83.6077"	"28568"	"28568"	"28539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"4.1"	""	"6.4"	""	"9.2"	""	"5.2"	"9.9"	""	"1399"	"32"	"38.000"	"31.000"	"0.0494069129206941"	"17"	"0.0001308"	"0.0002055"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLLDPMGGIVMTNDGNAILR"	"[K].mLLDPMGGIVMTNDGNAILR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"787.41614"	"2360.23386"	"2360.23376"	"0.04"	"0.00003"	"12/186"	"12"	"186"	"128966.642578125"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"83.5414"	"28490"	"28490"	"28460"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"8.4"	""	"8.2"	""	"9.9"	""	"8.5"	"9.9"	""	"1415"	"22"	"38.000"	"31.000"	"0.454701560001791"	"17"	"0"	"0.0001837"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIKPANVFITATGVVK"	"[R].dIkPANVFITATGVVk.[L]"	"N-Term(TMT6plex); K3(TMT6plex); K16(TMT6plex)"	"1"	"1"	"D3ZBE5"	"Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus OX=10116 GN=Nek7 PE=2 SV=1"	"D3ZBE5"	"Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus OX=10116 GN=Nek7 PE=2 SV=1"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"787.48914"	"2360.45285"	"2360.45203"	"0.35"	"0.00028"	"14/168"	"14"	"168"	"710543.950439453"	"HCD"	"MS2"	"48.09449"	"42.1"	"100.000"	"59.5515"	"18770"	"18770"	"18741"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.1"	""	"51.8"	""	"57.9"	""	"80.2"	""	"69.5"	"71.2"	""	"225"	"42"	"30.000"	"23.000"	"0.000748432300726959"	"20"	"0"	"1.071E-05"	"1.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDTEDVPMILVGNK"	"[R].vkDTEDVPmILVGNk.[C]"	"N-Term(TMT6plex); K2(TMT6plex); M9(Oxidation); K15(TMT6plex)"	"1"	"1"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"787.79272"	"2361.36362"	"2361.36664"	"-1.28"	"-0.00101"	"8/144"	"8"	"144"	"1097456.15777588"	"HCD"	"MS2"	"25.79599"	"47.0"	"100.000"	"48.5829"	"14268"	"14268"	"14239"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.4"	""	"52.8"	""	"51.3"	""	"96.0"	"0.2"	"97.2"	"85.3"	""	"794"	"40"	"35.000"	"28.000"	"0.00435301843868845"	"15"	"0"	"4.81E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VKDTEDVPMILVGNK"	"[R].vkDTEDVPmILVGNk.[C]"	"N-Term(TMT6plex); K2(TMT6plex); M9(Oxidation); K15(TMT6plex)"	"1"	"1"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"1"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"787.79285"	"2361.36399"	"2361.36664"	"-1.13"	"-0.00089"	"8/144"	"8"	"144"	"1241241.11419678"	"HCD"	"MS2"	"0"	"51.9"	"100.000"	"48.8577"	"14428"	"14428"	"14399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.3"	""	"60.7"	""	"67.7"	""	"107.5"	"1.2"	"104.7"	"86.9"	""	"794"	"38"	"35.000"	"28.000"	"0.00694689135383989"	"18"	"0"	"5.38E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQDVYVLSEQQGLLLK"	"[R].gIQDVYVLSEQQGLLLk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"787.79657"	"2361.37516"	"2361.37937"	"-1.78"	"-0.00140"	"15/168"	"15"	"168"	"1212099.10766602"	"HCD"	"MS2"	"52.8898"	"36.9"	"100.000"	"76.7487"	"25770"	"25770"	"25761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.8"	""	"47.1"	""	"42.9"	""	"65.3"	""	"79.9"	"75.1"	""	"675"	"42"	"35.000"	"28.000"	"0.00219418770490793"	"19"	"0"	"7.364E-06"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNLAYDIVQLPTGLTGIK"	"[K].sNLAYDIVQLPTGLTGIk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1181.19238"	"2361.37749"	"2361.37937"	"-0.80"	"-0.00094"	"4/196"	"4"	"196"	"68044.8258666992"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"81.3083"	"27579"	"27579"	"27552"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"6.7"	""	"6.9"	""	"7.0"	""	"4.6"	"8.9"	""	"647"	"12"	"35.000"	"28.000"	"2.0838875739416"	"13"	"0.001217"	"0.01731"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNLAYDIVQLPTGLTGIK"	"[K].sNLAYDIVQLPTGLTGIk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"4"	"4"	"0.9434"	"0.0000"	"1"	"1"	"1"	"591.10028"	"2361.37929"	"2361.37937"	"-0.03"	"-0.00002"	"15/196"	"15"	"196"	"904132.777954102"	"HCD"	"MS2"	"31.50422"	"18.7"	"100.000"	"81.2322"	"27548"	"27548"	"27520"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.8"	""	"22.6"	""	"26.0"	""	"27.4"	"1.2"	"35.5"	"34.7"	""	"645"	"53"	"35.000"	"28.000"	"0.000149461631614953"	"18"	"0"	"1.067E-06"	"1.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNLAYDIVQLPTGLTGIK"	"[K].sNLAYDIVQLPTGLTGIk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"4"	"4"	"0.9688"	"0.0000"	"1"	"1"	"1"	"591.10040"	"2361.37978"	"2361.37937"	"0.18"	"0.00010"	"13/196"	"13"	"196"	"1329967.77539063"	"HCD"	"MS2"	"17.93522"	"22.9"	"100.000"	"81.2756"	"27616"	"27616"	"27598"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.1"	""	"32.0"	""	"36.7"	""	"43.0"	""	"36.3"	"42.8"	""	"642"	"32"	"35.000"	"28.000"	"0.0185568831217235"	"16"	"0"	"4.213E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNLAYDIVQLPTGLTGIK"	"[K].sNLAYDIVQLPTGLTGIk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"787.79816"	"2361.37992"	"2361.37937"	"0.23"	"0.00018"	"16/196"	"16"	"196"	"1734176.18994141"	"HCD"	"MS2"	"9.481223"	"49.1"	"100.000"	"81.1580"	"27568"	"27568"	"27550"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.5"	""	"76.5"	""	"75.1"	""	"79.7"	""	"77.4"	"79.4"	""	"646"	"47"	"35.000"	"28.000"	"0.000647444464838947"	"17"	"0"	"2.304E-06"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQDVYVLSEQQGLLLK"	"[R].gIQDVYVLSEQQGLLLk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"787.79846"	"2361.38083"	"2361.37937"	"0.62"	"0.00049"	"19/168"	"19"	"168"	"935006.250915527"	"HCD"	"MS2"	"0"	"29.8"	"100.000"	"76.7663"	"25727"	"25727"	"25716"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.9"	""	"37.1"	""	"40.1"	""	"50.8"	""	"55.0"	"60.7"	""	"634"	"45"	"35.000"	"28.000"	"0.00105939827688278"	"17"	"0"	"2.375E-06"	"1.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNLAYDIVQLPTGLTGIK"	"[K].sNLAYDIVQLPTGLTGIk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"787.79883"	"2361.38193"	"2361.37937"	"1.09"	"0.00085"	"18/196"	"18"	"196"	"2293100.79095459"	"HCD"	"MS2"	"8.515596"	"62.2"	"100.000"	"81.1769"	"27525"	"27525"	"27504"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.4"	""	"85.8"	""	"97.7"	""	"95.2"	"1.1"	"107.7"	"103.3"	""	"624"	"61"	"34.000"	"27.000"	"2.67395807711875E-05"	"16"	"0"	"1.072E-06"	"1.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"788.08667"	"2362.24546"	"2362.25238"	"-2.93"	"-0.00231"	"12/124"	"12"	"124"	"797039.440795898"	"HCD"	"MS2"	"55.42778"	"33.7"	"100.000"	"69.8028"	"22895"	"22895"	"22869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.7"	""	"53.5"	""	"44.4"	""	"50.7"	"0.2"	"56.9"	"57.5"	""	"1403"	"22"	"38.000"	"31.000"	"0.485319426099633"	"14"	"0.0001889"	"0.0004467"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"788.08826"	"2362.25022"	"2362.25238"	"-0.91"	"-0.00072"	"10/124"	"10"	"124"	"5497228.1784668"	"HCD"	"MS2"	"13.01485"	"146.1"	"100.000"	"68.1183"	"22207"	"22207"	"22186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"242.7"	""	"206.0"	""	"185.6"	""	"236.1"	""	"255.2"	"257.7"	""	"1386"	"38"	"38.000"	"31.000"	"0.011110490557482"	"15"	"0"	"1.957E-05"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"788.08856"	"2362.25113"	"2362.25238"	"-0.53"	"-0.00041"	"14/124"	"14"	"124"	"1209230.66650391"	"HCD"	"MS2"	"6.870039"	"46.2"	"100.000"	"69.4542"	"22804"	"22804"	"22778"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.5"	""	"66.1"	""	"59.6"	""	"76.2"	""	"92.9"	"80.0"	""	"1380"	"32"	"38.000"	"31.000"	"0.0421549997184844"	"22"	"0.0001889"	"0.0005876"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"788.08887"	"2362.25205"	"2362.25238"	"-0.14"	"-0.00011"	"13/124"	"13"	"124"	"1496515.1338501"	"HCD"	"MS2"	"31.54962"	"55.8"	"100.000"	"69.4973"	"22770"	"22770"	"22746"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.6"	""	"74.0"	""	"76.0"	""	"93.9"	""	"106.3"	"100.4"	""	"1368"	"26"	"38.000"	"31.000"	"0.174604769102029"	"15"	"0"	"0.0001283"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"788.08905"	"2362.25260"	"2362.25238"	"0.09"	"0.00007"	"13/124"	"13"	"124"	"6745451.75866699"	"HCD"	"MS2"	"12.56508"	"174.2"	"100.000"	"67.9554"	"22192"	"22192"	"22170"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"272.3"	""	"255.6"	""	"232.4"	""	"290.2"	"0.4"	"315.8"	"281.9"	""	"1369"	"42"	"38.000"	"31.000"	"0.00434884022852519"	"15"	"0"	"2.768E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"4"	"4"	"0.8857"	"0.0000"	"1"	"1"	"1"	"591.31866"	"2362.25283"	"2362.25238"	"0.19"	"0.00011"	"14/124"	"14"	"124"	"15967197.1752319"	"HCD"	"MS2"	"10.17424"	"243.5"	"100.000"	"68.2289"	"22252"	"22252"	"22234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"398.4"	""	"350.4"	""	"319.1"	""	"389.1"	""	"454.0"	"397.6"	""	"1362"	"35"	"38.000"	"31.000"	"0.0239964563179934"	"19"	"0"	"0.0001479"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"4"	"4"	"0.8788"	"0.0000"	"1"	"1"	"1"	"591.31879"	"2362.25332"	"2362.25238"	"0.40"	"0.00023"	"12/124"	"12"	"124"	"9069734.63250732"	"HCD"	"MS2"	"3.982023"	"156.4"	"100.000"	"68.5381"	"22379"	"22379"	"22362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.1"	""	"213.0"	""	"215.5"	""	"237.3"	""	"291.4"	"275.4"	""	"1368"	"33"	"38.000"	"31.000"	"0.0358142698624653"	"18"	"0"	"0.0001331"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1181.63062"	"2362.25395"	"2362.25238"	"0.67"	"0.00079"	"6/124"	"6"	"124"	"91355.2356567383"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"68.2437"	"22310"	"22310"	"22282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.9"	""	"4.2"	""	"5.9"	""	"7.2"	""	"7.1"	"7.2"	""	"1354"	"14"	"38.000"	"31.000"	"2.79633158847339"	"13"	"0.001966"	"0.02865"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"4"	"4"	"0.8889"	"0.0000"	"1"	"1"	"1"	"591.31897"	"2362.25405"	"2362.25238"	"0.71"	"0.00042"	"14/124"	"14"	"124"	"17480422.2043457"	"HCD"	"MS2"	"1.279733"	"116.2"	"40.443"	"68.2990"	"22332"	"22332"	"22314"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"191.0"	""	"181.8"	""	"154.8"	""	"185.8"	""	"202.0"	"190.3"	""	"1354"	"36"	"38.000"	"31.000"	"0.0158704290797159"	"19"	"7.476E-05"	"0.0002036"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"4"	"4"	"0.9556"	"0.0000"	"1"	"1"	"1"	"591.31909"	"2362.25454"	"2362.25238"	"0.91"	"0.00054"	"15/124"	"15"	"124"	"8382393.68920898"	"HCD"	"MS2"	"36.32532"	"124.2"	"100.000"	"67.9924"	"22207"	"22207"	"22186"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"218.9"	""	"189.6"	""	"159.0"	""	"193.0"	"0.4"	"216.7"	"197.4"	""	"1351"	"45"	"38.000"	"31.000"	"0.00212141362271339"	"18"	"0"	"1.737E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"788.08997"	"2362.25534"	"2362.25238"	"1.26"	"0.00099"	"16/124"	"16"	"124"	"43347069.956543"	"HCD"	"MS2"	"0"	"213.7"	"21.843"	"68.2553"	"22315"	"22315"	"22298"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"365.5"	""	"331.4"	""	"264.8"	""	"333.0"	""	"389.6"	"338.9"	""	"1349"	"37"	"38.000"	"31.000"	"0.012559777736791"	"15"	"0"	"6.963E-06"	"1.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPYFYAPELLYYAEK"	"[R].hPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"788.09015"	"2362.25589"	"2362.25238"	"1.49"	"0.00117"	"14/124"	"14"	"124"	"46762230.8291016"	"HCD"	"MS2"	"0"	"225.3"	"19.992"	"68.4204"	"22331"	"22331"	"22314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"358.9"	""	"340.2"	""	"305.9"	""	"330.7"	""	"425.5"	"376.6"	""	"1347"	"45"	"38.000"	"31.000"	"0.00192016080316388"	"15"	"0"	"1.302E-05"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDFEHFLPMLQTVAK"	"[K].vLDFEHFLPmLQTVAk.[N]"	"N-Term(TMT6plex); M10(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"0.9800"	"0.0000"	"1"	"1"	"1"	"788.11243"	"2362.32273"	"2362.32450"	"-0.75"	"-0.00059"	"15/148"	"15"	"148"	"1364475.0536499"	"HCD"	"MS2"	"42.48546"	"35.4"	"100.000"	"81.5504"	"27728"	"27728"	"27710"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.5"	""	"39.3"	""	"40.3"	""	"108.1"	""	"59.8"	"62.7"	""	"1088"	"50"	"37.000"	"30.000"	"0.000608974208606131"	"16"	"0"	"7.363E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDFEHFLPMLQTVAK"	"[K].vLDFEHFLPmLQTVAk.[N]"	"N-Term(TMT6plex); M10(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"0.9464"	"0.0000"	"1"	"1"	"1"	"788.11267"	"2362.32346"	"2362.32450"	"-0.44"	"-0.00035"	"14/148"	"14"	"148"	"1413807.0065918"	"HCD"	"MS2"	"25.76916"	"38.5"	"100.000"	"81.5253"	"27667"	"27667"	"27648"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.9"	""	"31.4"	""	"45.4"	""	"114.6"	"1.9"	"66.8"	"65.1"	""	"1082"	"56"	"37.000"	"30.000"	"0.000133720276245373"	"19"	"0"	"2.641E-05"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDFEHFLPMLQTVAK"	"[K].vLDFEHFLPmLQTVAk.[N]"	"N-Term(TMT6plex); M10(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"788.11279"	"2362.32383"	"2362.32450"	"-0.28"	"-0.00022"	"11/148"	"11"	"148"	"246401.338623047"	"HCD"	"MS2"	"9.236408"	"10.7"	"100.000"	"81.8875"	"27866"	"27866"	"27838"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.9"	""	"10.3"	""	"10.9"	""	"29.7"	""	"20.1"	"18.1"	""	"1077"	"35"	"37.000"	"30.000"	"0.0180794705269831"	"15"	"0"	"8.264E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGLSSVPASGGLVGVYNGK"	"[K].eLGLSSVPASGGLVGVYNGk.[S]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q99ML5"	"Prenylcysteine oxidase OS=Rattus norvegicus OX=10116 GN=Pcyox1 PE=1 SV=1"	"Q99ML5"	"Prenylcysteine oxidase OS=Rattus norvegicus OX=10116 GN=Pcyox1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"788.11774"	"2362.33866"	"2362.33823"	"0.18"	"0.00014"	"14/174"	"14"	"174"	"1055221.33648682"	"HCD"	"MS2"	"22.27295"	"57.4"	"100.000"	"63.0362"	"20193"	"20193"	"20163"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"85.9"	""	"81.5"	""	"88.5"	""	"92.4"	"2.2"	"99.2"	"93.1"	""	"976"	"28"	"36.000"	"29.000"	"0.0761061621379553"	"14"	"0"	"4.706E-05"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQDVYVLSEQQGLLLK"	"[R].gIQDVYVLSEqQGLLLk.[A]"	"N-Term(TMT6plex); Q11(Deamidated); K17(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.1489"	"0.0000"	"1"	"1"	"1"	"788.13287"	"2362.38407"	"2362.36338"	"8.76"	"0.00689"	"15/168"	"15"	"168"	"1088318.54742432"	"HCD"	"MS2"	"42.21361"	"33.9"	"100.000"	"76.7259"	"25762"	"25762"	"25746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.8"	""	"46.2"	""	"41.3"	""	"60.9"	""	"77.5"	"60.2"	""	"626"	"47"	"34.000"	"27.000"	"0.00056564550144142"	""	"0"	"4.789E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQDLEMYGVNYFSIK"	"[K].iAQDLEmYGVNYFSIk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K16(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"789.08734"	"2365.24747"	"2365.25139"	"-1.66"	"-0.00131"	"14/166"	"14"	"166"	"375858.466674805"	"HCD"	"MS2"	"5.869671"	"15.5"	"100.000"	"82.8177"	"28245"	"28245"	"28221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.6"	""	"20.4"	""	"17.8"	""	"31.7"	""	"32.5"	"27.2"	""	"1417"	"55"	"38.000"	"31.000"	"0.000215943360015143"	"27"	"0"	"2.634E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQDLEMYGVNYFSIK"	"[K].iAQDLEmYGVNYFSIk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K16(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"789.08838"	"2365.25058"	"2365.25139"	"-0.34"	"-0.00027"	"13/166"	"13"	"166"	"375391.143615723"	"HCD"	"MS2"	"3.757917"	"17.0"	"100.000"	"83.1244"	"28370"	"28370"	"28349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.5"	""	"21.0"	""	"21.1"	""	"35.5"	""	"32.4"	"36.1"	""	"1394"	"36"	"38.000"	"31.000"	"0.0183329679035108"	"22"	"0"	"9.547E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQDLEMYGVNYFSIK"	"[K].iAQDLEmYGVNYFSIk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K16(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"789.08923"	"2365.25315"	"2365.25139"	"0.74"	"0.00059"	"14/166"	"14"	"166"	"487345.550720215"	"HCD"	"MS2"	"3.033096"	"20.8"	"100.000"	"83.0954"	"28307"	"28307"	"28288"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.7"	""	"29.0"	""	"28.3"	""	"43.7"	""	"36.4"	"36.0"	""	"1387"	"46"	"38.000"	"31.000"	"0.00181989555983711"	"20"	"0"	"3.321E-05"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQDLEMYGVNYFSIK"	"[K].iAQDLEmYGVNYFSIk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K16(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"789.08942"	"2365.25370"	"2365.25139"	"0.97"	"0.00077"	"14/166"	"14"	"166"	"520163.489746094"	"HCD"	"MS2"	"10.47361"	"20.9"	"100.000"	"82.8021"	"28188"	"28188"	"28160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.5"	""	"29.5"	""	"30.7"	""	"40.4"	""	"32.5"	"39.1"	""	"1388"	"54"	"38.000"	"31.000"	"0.000291984280098805"	"28"	"0"	"1.358E-05"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMSGGLAEVPGLSINFAK"	"[K].sLmSGGLAEVPGLSINFAk.[V]"	"N-Term(TMT6plex); M3(Oxidation); K19(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.11041"	"2365.31668"	"2365.32014"	"-1.46"	"-0.00115"	"17/176"	"17"	"176"	"507470.660827637"	"HCD"	"MS2"	"20.88933"	"21.3"	"100.000"	"73.7635"	"24512"	"24512"	"24481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.8"	""	"23.8"	""	"27.2"	""	"43.8"	""	"38.8"	"42.1"	""	"1050"	"46"	"37.000"	"30.000"	"0.00124784115047806"	"15"	"0"	"6.211E-06"	"1.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMSGGLAEVPGLSINFAK"	"[K].sLmSGGLAEVPGLSINFAk.[V]"	"N-Term(TMT6plex); M3(Oxidation); K19(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.11084"	"2365.31797"	"2365.32014"	"-0.92"	"-0.00072"	"16/176"	"16"	"176"	"582753.384033203"	"HCD"	"MS2"	"11.87855"	"24.9"	"100.000"	"73.8120"	"24583"	"24583"	"24559"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.3"	""	"33.0"	""	"29.4"	""	"60.0"	"0.7"	"43.2"	"44.6"	""	"1040"	"42"	"37.000"	"30.000"	"0.00325839209629614"	"15"	"0"	"3.981E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPSKPSSAPALRPGPK"	"[R].tSPSkPSSAPALRPGPk.[T]"	"N-Term(TMT6plex); K5(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.10895"	"2365.41396"	"2365.41704"	"-1.30"	"-0.00077"	"10/166"	"10"	"166"	"10245328.5517578"	"HCD"	"MS2"	"0"	"259.8"	"71.638"	"30.1202"	"6781"	"6781"	"6761"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"227.0"	""	"266.5"	""	"273.5"	""	"661.4"	""	"614.2"	"430.8"	""	"415"	"8"	"33.000"	"26.000"	"3.36525595201978"	"13"	"0.0001889"	"0.000389"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPSKPSSAPALRPGPK"	"[R].tSPSkPSSAPALRPGPk.[T]"	"N-Term(TMT6plex); K5(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.10938"	"2365.41567"	"2365.41704"	"-0.58"	"-0.00034"	"9/166"	"9"	"166"	"1910014.53430176"	"HCD"	"MS2"	"0"	"90.6"	"100.000"	"30.1676"	"6760"	"6760"	"6730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.7"	""	"87.6"	""	"102.3"	""	"233.4"	"0.1"	"201.8"	"148.5"	""	"402"	"3"	"33.000"	"26.000"	"10.2611504995057"	"13"	"0.0001889"	"0.001103"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQDLEMYGVNYFSIK"	"[K].iAQDLEmYGVnYFSIk.[N]"	"N-Term(TMT6plex); M7(Oxidation); N11(Deamidated); K16(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.5652"	"0.0000"	"1"	"1"	"1"	"789.42273"	"2366.25364"	"2366.23541"	"7.70"	"0.00608"	"9/166"	"9"	"166"	"109313.633666992"	"HCD"	"MS2"	"41.9986"	"6.6"	"100.000"	"83.2854"	"28436"	"28436"	"28413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.6"	""	"7.5"	""	"11.0"	""	"11.8"	""	"12.7"	"12.6"	""	"1401"	"23"	"38.000"	"31.000"	"0.321668207992226"	"17"	"0.000523"	"0.00281"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPNGYDNGIIWATWK"	"[K].sSTPNGYDNGIIWATWk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"790.08044"	"2368.22678"	"2368.23377"	"-2.95"	"-0.00233"	"16/180"	"16"	"180"	"1213945.5770874"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"67.6493"	"22067"	"22067"	"22042"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.2"	""	"77.6"	""	"78.5"	""	"87.9"	""	"115.0"	"99.3"	""	"1436"	"31"	"38.000"	"31.000"	"0.0626793442502664"	"17"	"0.0001889"	"0.0005784"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPNGYDNGIIWATWK"	"[K].sSTPNGYDNGIIWATWk.[T]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"790.08240"	"2368.23264"	"2368.23377"	"-0.48"	"-0.00038"	"17/180"	"17"	"180"	"1344109.85748291"	"HCD"	"MS2"	"15.92817"	"63.0"	"100.000"	"67.7253"	"22047"	"22047"	"22029"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.1"	""	"88.8"	""	"82.0"	""	"112.5"	"1.0"	"115.3"	"98.5"	""	"1431"	"34"	"38.000"	"31.000"	"0.0254454208436109"	"17"	"0"	"9.844E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPPGEYVLVPSTFEPHK"	"[K].lPPGEYVLVPSTFEPHk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"790.11499"	"2368.33042"	"2368.33169"	"-0.54"	"-0.00042"	"10/146"	"10"	"146"	"2720736.20892334"	"HCD"	"MS2"	"23.53455"	"79.0"	"100.000"	"62.2039"	"19853"	"19853"	"19827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.2"	""	"98.8"	""	"100.9"	""	"117.3"	"1.2"	"155.9"	"157.9"	""	"983"	"33"	"36.000"	"29.000"	"0.0235246690376577"	"17"	"0"	"4.066E-05"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPPGEYVLVPSTFEPHK"	"[K].lPPGEYVLVPSTFEPHk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"790.11505"	"2368.33060"	"2368.33169"	"-0.46"	"-0.00036"	"12/146"	"12"	"146"	"3019011.20446777"	"HCD"	"MS2"	"11.93291"	"68.1"	"100.000"	"62.5107"	"19978"	"19978"	"19955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.6"	""	"96.5"	""	"82.6"	""	"103.1"	"1.1"	"141.3"	"129.5"	""	"985"	"50"	"36.000"	"29.000"	"0.000551323157607572"	"19"	"0"	"1.357E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPPGEYVLVPSTFEPHK"	"[K].lPPGEYVLVPSTFEPHk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"790.11536"	"2368.33152"	"2368.33169"	"-0.07"	"-0.00006"	"10/146"	"10"	"146"	"2827786.80987549"	"HCD"	"MS2"	"14.41307"	"69.3"	"100.000"	"62.4107"	"19884"	"19884"	"19865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.2"	""	"86.2"	""	"88.7"	""	"108.6"	""	"151.3"	"147.5"	""	"976"	"36"	"36.000"	"29.000"	"0.0110260465586784"	"17"	"0"	"2.295E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPPGEYVLVPSTFEPHK"	"[K].lPPGEYVLVPSTFEPHk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"790.11548"	"2368.33188"	"2368.33169"	"0.08"	"0.00006"	"14/146"	"14"	"146"	"2847026.23217773"	"HCD"	"MS2"	"25.23006"	"81.9"	"100.000"	"62.1068"	"19760"	"19760"	"19737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"117.7"	""	"105.5"	""	"106.4"	""	"130.3"	""	"158.4"	"158.6"	""	"969"	"33"	"36.000"	"29.000"	"0.0253100953570073"	"16"	"0"	"1.727E-05"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPPGEYVLVPSTFEPHK"	"[K].lPPGEYVLVPSTFEPHk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"790.11603"	"2368.33353"	"2368.33169"	"0.78"	"0.00061"	"10/146"	"10"	"146"	"1006988.52593994"	"HCD"	"MS2"	"6.643377"	"35.9"	"100.000"	"62.7428"	"20020"	"20020"	"19993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.0"	""	"52.7"	""	"39.1"	""	"58.9"	""	"65.7"	"70.6"	""	"963"	"45"	"36.000"	"29.000"	"0.00147773408741034"	"19"	"0"	"2.018E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPPGEYVLVPSTFEPHK"	"[K].lPPGEYVLVPSTFEPHk.[N]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"790.11603"	"2368.33353"	"2368.33169"	"0.78"	"0.00061"	"15/146"	"15"	"146"	"1048662.91326904"	"HCD"	"MS2"	"7.474486"	"34.3"	"100.000"	"62.8427"	"20114"	"20114"	"20083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.3"	""	"39.9"	""	"45.7"	""	"50.3"	"0.4"	"75.6"	"69.7"	""	"963"	"41"	"36.000"	"29.000"	"0.00357763714897262"	"18"	"0"	"7.925E-06"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPNGYDNGIIWATWK"	"[K].sSTPNGYDnGIIWATWk.[T]"	"N-Term(TMT6plex); N9(Deamidated); K17(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.5200"	"0.0000"	"1"	"1"	"1"	"790.40918"	"2369.21299"	"2369.21778"	"-2.02"	"-0.00160"	"15/180"	"15"	"180"	"969367.282409668"	"HCD"	"MS2"	"25.84367"	"55.8"	"100.000"	"69.9266"	"22945"	"22945"	"22928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.9"	""	"79.2"	""	"67.6"	""	"90.1"	"0.5"	"97.2"	"106.1"	""	"1349"	"25"	"38.000"	"31.000"	"0.218263921599034"	"23"	"0.0001889"	"0.000526"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPNGYDNGIIWATWK"	"[K].sSTPnGYDNGIIWATWk.[T]"	"N-Term(TMT6plex); N5(Deamidated); K17(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.4062"	"0.0000"	"1"	"1"	"1"	"790.40991"	"2369.21518"	"2369.21778"	"-1.10"	"-0.00087"	"15/180"	"15"	"180"	"559640.014770508"	"HCD"	"MS2"	"39.06358"	"28.8"	"100.000"	"70.1481"	"23087"	"23087"	"23066"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.5"	""	"36.9"	""	"37.5"	""	"45.5"	"1.1"	"65.9"	"51.2"	""	"1355"	"32"	"38.000"	"31.000"	"0.0401706907402949"	"21"	"0.0001308"	"0.0002123"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPNGYDNGIIWATWK"	"[K].sSTPnGYDNGIIWATWk.[T]"	"N-Term(TMT6plex); N5(Deamidated); K17(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.5600"	"0.0000"	"1"	"1"	"1"	"790.41156"	"2369.22013"	"2369.21778"	"0.99"	"0.00078"	"15/180"	"15"	"180"	"575549.098144531"	"HCD"	"MS2"	"26.6782"	"28.7"	"100.000"	"70.3018"	"23098"	"23098"	"23075"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.8"	""	"35.0"	""	"33.0"	""	"50.4"	""	"70.4"	"49.0"	""	"1359"	"25"	"38.000"	"31.000"	"0.195069540548578"	"16"	"0.0001308"	"0.0002165"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPNGYDNGIIWATWK"	"[K].sSTPNGYDnGIIWATWk.[T]"	"N-Term(TMT6plex); N9(Deamidated); K17(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"790.41333"	"2369.22544"	"2369.21778"	"3.23"	"0.00255"	"16/180"	"16"	"180"	"1104714.55773926"	"HCD"	"MS2"	"24.73814"	"57.4"	"100.000"	"67.6997"	"22037"	"22037"	"22015"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.6"	""	"90.5"	""	"77.7"	""	"93.8"	""	"105.3"	"92.8"	""	"1379"	"32"	"38.000"	"31.000"	"0.0452412161115854"	"23"	"0.0001889"	"0.0005433"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPNGYDNGIIWATWK"	"[K].sSTPNGYDnGIIWATWk.[T]"	"N-Term(TMT6plex); N9(Deamidated); K17(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"0.1212"	"0.0000"	"1"	"1"	"1"	"790.41473"	"2369.22965"	"2369.21778"	"5.01"	"0.00396"	"16/180"	"16"	"180"	"698794.788757324"	"HCD"	"MS2"	"63.04942"	"34.7"	"100.000"	"67.6124"	"22052"	"22052"	"22026"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.5"	""	"51.6"	""	"42.8"	""	"53.0"	""	"74.5"	"57.3"	""	"1401"	"33"	"38.000"	"31.000"	"0.0350274191751373"	"28"	"0"	"0.0001579"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALGSEPIQYAVPVVK"	"[R].vLQALGSEPIQYAVPVVk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.47784"	"2369.41898"	"2369.42084"	"-0.78"	"-0.00062"	"18/168"	"18"	"168"	"2630833.66491699"	"HCD"	"MS2"	"0"	"53.1"	"100.000"	"76.4394"	"25649"	"25649"	"25631"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.7"	""	"84.0"	""	"83.7"	""	"65.3"	"1.6"	"86.5"	"106.5"	""	"357"	"72"	"32.000"	"25.000"	"1.25787712810636E-06"	"17"	"0"	"1.256E-06"	"1.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALGSEPIQYAVPVVK"	"[R].vLQALGSEPIQYAVPVVk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.11023"	"2369.41909"	"2369.42084"	"-0.74"	"-0.00044"	"11/168"	"11"	"168"	"3949909.92901611"	"HCD"	"MS2"	"24.06351"	"60.0"	"100.000"	"76.3404"	"25558"	"25558"	"25537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.9"	""	"83.4"	""	"95.3"	""	"79.1"	"1.2"	"115.2"	"118.7"	""	"353"	"52"	"32.000"	"25.000"	"0.000100402542293938"	"16"	"0"	"2.756E-06"	"1.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALGSEPIQYAVPVVK"	"[R].vLQALGSEPIQYAVPVVk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.47809"	"2369.41971"	"2369.42084"	"-0.48"	"-0.00038"	"17/168"	"17"	"168"	"1897969.29229736"	"HCD"	"MS2"	"12.44802"	"44.2"	"100.000"	"76.1460"	"25531"	"25531"	"25503"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.3"	""	"63.9"	""	"57.3"	""	"69.1"	""	"81.4"	"87.7"	""	"351"	"70"	"32.000"	"25.000"	"1.96914238729995E-06"	"17"	"0"	"1.048E-06"	"1.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALGSEPIQYAVPVVK"	"[R].vLQALGSEPIQYAVPVVk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.11041"	"2369.41982"	"2369.42084"	"-0.43"	"-0.00025"	"10/168"	"10"	"168"	"3970895.30316162"	"HCD"	"MS2"	"16.3386"	"65.2"	"100.000"	"76.3170"	"25600"	"25600"	"25583"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.7"	""	"104.1"	""	"90.5"	""	"85.7"	""	"120.2"	"125.8"	""	"350"	"59"	"32.000"	"25.000"	"2.46058316722735E-05"	"16"	"0"	"3.099E-06"	"1.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALGSEPIQYAVPVVK"	"[R].vLQALGSEPIQYAVPVVk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.47833"	"2369.42044"	"2369.42084"	"-0.17"	"-0.00013"	"17/168"	"17"	"168"	"2441059.14788818"	"HCD"	"MS2"	"3.312775"	"56.7"	"100.000"	"76.2140"	"25507"	"25507"	"25489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.3"	""	"91.9"	""	"88.4"	""	"74.6"	"1.7"	"94.5"	"106.4"	""	"348"	"70"	"32.000"	"25.000"	"1.58324909438012E-06"	"17"	"0"	"9.198E-07"	"1.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALGSEPIQYAVPVVK"	"[R].vLQALGSEPIQYAVPVVk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1185.21399"	"2369.42070"	"2369.42084"	"-0.06"	"-0.00007"	"9/168"	"9"	"168"	"75826.0009765625"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"76.3936"	"25580"	"25580"	"25553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.0"	""	"4.1"	""	"5.5"	""	"1.9"	""	"5.0"	"7.3"	""	"345"	"27"	"32.000"	"25.000"	"0.0321210031074344"	"14"	"0.0001889"	"0.0008871"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALGSEPIQYAVPVVK"	"[R].vLQALGSEPIQYAVPVVk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.47864"	"2369.42136"	"2369.42084"	"0.22"	"0.00017"	"16/168"	"16"	"168"	"1785062.24432373"	"HCD"	"MS2"	"2.476933"	"44.7"	"100.000"	"76.5324"	"25636"	"25636"	"25617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"67.8"	""	"71.2"	""	"63.6"	""	"59.2"	"2.1"	"75.3"	"83.9"	""	"343"	"59"	"32.000"	"25.000"	"2.17402294994621E-05"	"16"	"0"	"4.566E-06"	"1.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQALGSEPIQYAVPVVK"	"[R].vLQALGSEPIQYAVPVVk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1185.21509"	"2369.42290"	"2369.42084"	"0.87"	"0.00103"	"8/168"	"8"	"168"	"77796.3614501953"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"76.3889"	"25629"	"25629"	"25599"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.3"	""	"3.6"	""	"2.0"	""	"5.3"	""	"6.6"	"6.7"	""	"340"	"23"	"32.000"	"25.000"	"0.0853982402188059"	"14"	"0.0003146"	"0.001436"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYLYPLYGLGELPQGFAR"	"[K].sPYLYPLYGLGELPQGFAR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1185.63708"	"2370.26689"	"2370.26953"	"-1.11"	"-0.00132"	"9/174"	"9"	"174"	"203178.689575195"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"85.2543"	"29238"	"29238"	"29218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.5"	""	"10.5"	""	"11.2"	""	"9.6"	""	"6.8"	"10.5"	""	"1360"	"10"	"38.000"	"31.000"	"7.35375086882598"	"13"	"0.0006037"	"0.005476"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYLYPLYGLGELPQGFAR"	"[K].sPYLYPLYGLGELPQGFAR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.76050"	"2370.26694"	"2370.26953"	"-1.09"	"-0.00086"	"12/174"	"12"	"174"	"2013431.69342041"	"HCD"	"MS2"	"2.284141"	"12.1"	"100.000"	"85.2150"	"29222"	"29222"	"29202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.7"	""	"19.1"	""	"16.6"	""	"20.0"	""	"14.8"	"22.5"	""	"1365"	"60"	"38.000"	"31.000"	"6.50283381946142E-05"	"16"	"0"	"3.846E-06"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYLYPLYGLGELPQGFAR"	"[K].sPYLYPLYGLGELPQGFAR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.76080"	"2370.26786"	"2370.26953"	"-0.71"	"-0.00056"	"12/174"	"12"	"174"	"2250931.90563965"	"HCD"	"MS2"	"0.5277329"	"10.2"	"100.000"	"85.5186"	"29343"	"29343"	"29326"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.3"	""	"14.6"	""	"18.1"	""	"18.2"	""	"12.6"	"18.1"	""	"1349"	"55"	"38.000"	"31.000"	"0.000196327869613593"	"16"	"0"	"2.936E-07"	"1.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYLYPLYGLGELPQGFAR"	"[K].sPYLYPLYGLGELPQGFAR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"7"	"1185.63782"	"2370.26836"	"2370.26953"	"-0.50"	"-0.00059"	"3/174"	"3"	"174"	"69362.7086791992"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"85.4947"	"29285"	"29285"	"29268"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	"3.5"	""	""	""	"3.6"	""	"2.4"	"4.3"	""	"1350"	"1"	"38.000"	"31.000"	"56.7941720610506"	"13"	"0.006875"	"0.2584"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYLYPLYGLGELPQGFAR"	"[K].sPYLYPLYGLGELPQGFAR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.76099"	"2370.26841"	"2370.26953"	"-0.48"	"-0.00038"	"8/174"	"8"	"174"	"192502.851989746"	"HCD"	"MS2"	"4.380273"	"3.8"	"100.000"	"85.7569"	"29387"	"29387"	"29368"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.0"	""	"5.5"	""	"4.4"	""	"6.4"	""	"7.0"	"8.2"	""	"1348"	"24"	"38.000"	"31.000"	"0.27143128113536"	"14"	"0.0002277"	"0.001293"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYLYPLYGLGELPQGFAR"	"[K].sPYLYPLYGLGELPQGFAR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1185.63818"	"2370.26909"	"2370.26953"	"-0.19"	"-0.00022"	"7/174"	"7"	"174"	"160173.096496582"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"85.1878"	"29161"	"29161"	"29131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.9"	""	"7.4"	""	"8.6"	""	"10.2"	""	"5.1"	"7.4"	""	"1342"	"18"	"38.000"	"31.000"	"1.02499682507775"	"14"	"0.000494"	"0.002695"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYLYPLYGLGELPQGFAR"	"[K].sPYLYPLYGLGELPQGFAR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.76147"	"2370.26987"	"2370.26953"	"0.14"	"0.00011"	"13/174"	"13"	"174"	"3310853.54278564"	"HCD"	"MS2"	"0.1804873"	"16.0"	"100.000"	"85.4232"	"29256"	"29256"	"29243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.7"	""	"20.1"	""	"27.9"	""	"23.0"	""	"27.2"	"30.7"	""	"1340"	"51"	"38.000"	"31.000"	"0.000504748227701591"	"16"	"0"	"4.874E-07"	"1.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYLYPLYGLGELPQGFAR"	"[K].sPYLYPLYGLGELPQGFAR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"790.76178"	"2370.27079"	"2370.26953"	"0.53"	"0.00042"	"8/174"	"8"	"174"	"154932.908569336"	"HCD"	"MS2"	"4.505226"	"4.1"	"100.000"	"85.8835"	"29490"	"29490"	"29467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.5"	""	"3.7"	""	"5.0"	""	"6.3"	""	"8.0"	"8.7"	""	"1340"	"15"	"38.000"	"31.000"	"2.23395696551367"	"18"	"0.0003839"	"0.001686"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYLYPLYGLGELPQGFAR"	"[K].sPYLYPLYGLGELPQGFAR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.76178"	"2370.27079"	"2370.26953"	"0.53"	"0.00042"	"12/174"	"12"	"174"	"1510419.9989624"	"HCD"	"MS2"	"1.63372"	"10.6"	"100.000"	"85.1232"	"29134"	"29134"	"29115"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.4"	""	"12.7"	""	"11.8"	""	"19.4"	""	"19.8"	"20.8"	""	"1340"	"50"	"38.000"	"31.000"	"0.000719572906268634"	"16"	"0"	"1.03E-06"	"1.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGDLAGHGQEVLISLFK"	"[K].vEGDLAGHGQEVLISLFk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"790.78577"	"2370.34275"	"2370.34332"	"-0.24"	"-0.00019"	"15/178"	"15"	"178"	"1907859.57421875"	"HCD"	"MS2"	"37.34566"	"64.7"	"100.000"	"74.4626"	"24797"	"24797"	"24769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.5"	""	"41.3"	""	"43.8"	""	"90.3"	""	"94.4"	"273.5"	""	"949"	"29"	"36.000"	"29.000"	"0.0600117396875061"	"17"	"0"	"9.233E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSLADSYLDEGFLLDK"	"[K].lGGSLADSYLDEGFLLDk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"791.09650"	"2371.27494"	"2371.27971"	"-2.01"	"-0.00159"	"12/162"	"12"	"162"	"290917.742370605"	"HCD"	"MS2"	"8.464752"	"13.1"	"100.000"	"83.6814"	"28598"	"28598"	"28571"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.2"	""	"12.1"	""	"16.1"	""	"25.5"	""	"31.8"	"22.1"	""	"1331"	"48"	"38.000"	"31.000"	"0.00107683226505146"	"21"	"0"	"3.284E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGSLADSYLDEGFLLDK"	"[K].lGGSLADSYLDEGFLLDk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"3"	"3"	"0.9219"	"0.0000"	"1"	"1"	"1"	"791.09839"	"2371.28061"	"2371.27971"	"0.38"	"0.00030"	"16/162"	"16"	"162"	"338314.588378906"	"HCD"	"MS2"	"7.946266"	"11.6"	"100.000"	"83.6453"	"28532"	"28532"	"28508"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.5"	""	"11.7"	""	"11.3"	""	"22.3"	""	"24.5"	"28.4"	""	"1320"	"64"	"38.000"	"31.000"	"2.78319692262864E-05"	"21"	"0"	"6.069E-06"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPMSTVFYPSDGVATEK"	"[R].sVPMSTVFYPSDGVATEk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.9863"	"0.0000"	"1"	"1"	"1"	"791.75177"	"2373.24076"	"2373.24122"	"-0.20"	"-0.00015"	"18/168"	"18"	"168"	"2827353.35375977"	"HCD"	"MS2"	"0"	"76.7"	"100.000"	"58.8317"	"18477"	"18477"	"18453"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.2"	""	"98.2"	""	"102.7"	""	"82.4"	"2.3"	"133.8"	"141.7"	""	"1338"	"73"	"38.000"	"31.000"	"3.718999481139E-06"	"18"	"0"	"1.893E-06"	"1.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPMSTVFYPSDGVATEK"	"[R].sVPMSTVFYPSDGVATEk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.75177"	"2373.24076"	"2373.24122"	"-0.20"	"-0.00015"	"19/168"	"19"	"168"	"3405839.82165527"	"HCD"	"MS2"	"0"	"93.7"	"100.000"	"58.7209"	"18382"	"18382"	"18361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"183.3"	""	"122.2"	""	"146.2"	""	"102.8"	""	"168.1"	"163.4"	""	"1338"	"57"	"38.000"	"31.000"	"0.000140419078214414"	"16"	"0"	"1.513E-06"	"1.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLLPADGILIQGNDLK"	"[K].yGDLLPADGILIQGNDLk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1;Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"3"	"3"	"0.9464"	"0.0000"	"1"	"1"	"1"	"791.78418"	"2373.33799"	"2373.34298"	"-2.11"	"-0.00167"	"8/172"	"8"	"172"	"2288089.67926025"	"HCD"	"MS2"	"29.46623"	"66.7"	"100.000"	"76.5450"	"25693"	"25693"	"25679"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.8"	""	"98.8"	""	"82.3"	""	"122.8"	""	"137.1"	"124.4"	""	"988"	"56"	"36.000"	"29.000"	"0.000136058897944905"	"19"	"0"	"3.805E-06"	"1.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLLPADGILIQGNDLK"	"[K].yGDLLPADGILIQGNDLk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1;Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"791.78461"	"2373.33927"	"2373.34298"	"-1.57"	"-0.00124"	"8/172"	"8"	"172"	"2655242.70544434"	"HCD"	"MS2"	"14.36875"	"75.5"	"100.000"	"76.6519"	"25684"	"25684"	"25673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.4"	""	"105.0"	""	"92.9"	""	"126.2"	"2.6"	"153.7"	"156.9"	""	"985"	"63"	"36.000"	"29.000"	"2.24598181106014E-05"	"26"	"0"	"2.822E-06"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLLPADGILIQGNDLK"	"[K].yGDLLPADGILIQGNDLk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1;Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"3"	"791.78473"	"2373.33963"	"2373.34298"	"-1.41"	"-0.00112"	"12/172"	"12"	"172"	"911350.001342773"	"HCD"	"MS2"	"5.188598"	"34.7"	"100.000"	"76.9024"	"25832"	"25832"	"25815"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.5"	""	"37.8"	""	"47.0"	""	"62.5"	""	"71.6"	"76.6"	""	"983"	"7"	"36.000"	"29.000"	"10.5809222261703"	"17"	"0.003286"	"0.07453"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLLPADGILIQGNDLK"	"[K].yGDLLPADGILIQGNDLk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1;Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.78589"	"2373.34311"	"2373.34298"	"0.05"	"0.00004"	"10/172"	"10"	"172"	"839881.97668457"	"HCD"	"MS2"	"10.05542"	"34.5"	"100.000"	"76.9615"	"25805"	"25805"	"25789"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.4"	""	"41.0"	""	"40.8"	""	"67.8"	""	"71.1"	"67.1"	""	"962"	"5"	"36.000"	"29.000"	"14.1953163802653"	"13"	"0.002981"	"0.05613"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMQEEIFGPILPIVSVK"	"[K].vmQEEIFGPILPIVSVk.[N]"	"N-Term(TMT6plex); M2(Oxidation); K17(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"791.80005"	"2373.38559"	"2373.38676"	"-0.49"	"-0.00039"	"13/178"	"13"	"178"	"383620.176025391"	"HCD"	"MS2"	"12.49516"	"10.9"	"100.000"	"84.8299"	"29015"	"29015"	"28987"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.0"	""	"11.7"	""	"16.5"	""	"26.4"	""	"17.3"	"16.3"	""	"640"	"35"	"35.000"	"28.000"	"0.00940047888627689"	"19"	"0.0001859"	"0.0003611"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APEAAIPDVQLPEVQLPK"	"[K].aPEAAIPDVQLPEVQLPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"791.80042"	"2373.38669"	"2373.37937"	"3.09"	"0.00244"	"16/172"	"16"	"172"	"1178768.84234619"	"HCD"	"MS2"	"17.84577"	"30.7"	"100.000"	"73.9251"	"24629"	"24629"	"24607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.6"	""	"34.9"	""	"37.4"	""	"58.9"	""	"63.5"	"59.4"	""	"626"	"38"	"34.000"	"27.000"	"0.00525465657672361"	"17"	"0.0001889"	"0.0004407"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMQEEIFGPILPIVSVK"	"[K].vmQEEIFGPILPIVSVk.[N]"	"N-Term(TMT6plex); M2(Oxidation); K17(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"791.80048"	"2373.38687"	"2373.38676"	"0.05"	"0.00004"	"12/178"	"12"	"178"	"455299.403198242"	"HCD"	"MS2"	"4.040423"	"11.5"	"100.000"	"84.9052"	"29096"	"29096"	"29074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.0"	""	"13.1"	""	"12.6"	""	"28.2"	""	"20.8"	"23.6"	""	"624"	"39"	"34.000"	"27.000"	"0.00380324754864558"	"20"	"0"	"1.609E-05"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APEAAIPDVQLPEVQLPK"	"[K].aPEAAIPDVQLPEVQLPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"791.80054"	"2373.38706"	"2373.37937"	"3.24"	"0.00256"	"9/172"	"9"	"172"	"1005248.2612915"	"HCD"	"MS2"	"23.13323"	"26.0"	"100.000"	"73.9572"	"24591"	"24591"	"24561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.9"	""	"31.7"	""	"34.4"	""	"48.3"	""	"59.6"	"42.6"	""	"624"	"36"	"34.000"	"27.000"	"0.00835900517343538"	"17"	"0.0001889"	"0.0009936"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPTDVTPTFLTTGVLSTLR"	"[K].ePPTDVTPTFLTTGVLSTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.10669"	"2374.30552"	"2374.30671"	"-0.50"	"-0.00040"	"9/186"	"9"	"186"	"276661.96484375"	"HCD"	"MS2"	"10.1388"	"10.5"	"100.000"	"80.6323"	"27303"	"27303"	"27281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.3"	""	"14.3"	""	"13.9"	""	"16.1"	""	"25.4"	"18.9"	""	"1234"	"49"	"37.000"	"30.000"	"0.000845834049723714"	"16"	"0"	"2.784E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPTDVTPTFLTTGVLSTLR"	"[K].ePPTDVTPTFLTTGVLSTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.10669"	"2374.30552"	"2374.30671"	"-0.50"	"-0.00040"	"16/186"	"16"	"186"	"332985.793273926"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"80.5765"	"27331"	"27331"	"27311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.3"	""	"9.8"	""	"14.9"	""	"15.2"	""	"22.4"	"18.7"	""	"1234"	"49"	"37.000"	"30.000"	"0.00081149372146261"	"16"	"0"	"4.01E-05"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGDLLPADGILIQGNDLK"	"[K].yGDLLPADGILIQGnDLk.[I]"	"N-Term(TMT6plex); N15(Deamidated); K18(TMT6plex)"	"2"	"2"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1;Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"3"	"3"	"0.0645"	"0.0000"	"1"	"1"	"1"	"792.11676"	"2374.33573"	"2374.32700"	"3.68"	"0.00291"	"14/172"	"14"	"172"	"1518856.68737793"	"HCD"	"MS2"	"66.79426"	"43.5"	"100.000"	"76.5946"	"25662"	"25662"	"25649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.7"	""	"63.8"	""	"58.0"	""	"78.1"	""	"81.3"	"87.6"	""	"1026"	"31"	"37.000"	"30.000"	"0.0400975063753813"	"17"	"0"	"0.0001352"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAYFVVPTPLLEDDVK"	"[R].lPAYFVVPTPLLEDDVk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q5FVM6"	"Myotubularin-related protein 12 OS=Rattus norvegicus OX=10116 GN=Mtmr12 PE=1 SV=2"	"Q5FVM6"	"Myotubularin-related protein 12 OS=Rattus norvegicus OX=10116 GN=Mtmr12 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"792.12585"	"2374.36301"	"2374.36741"	"-1.85"	"-0.00147"	"6/140"	"6"	"140"	"77617.4036865234"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"90.6892"	"31315"	"31315"	"31309"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	"2.6"	""	"6.8"	""	"3.6"	""	"4.1"	"6.1"	""	"798"	"7"	"36.000"	"29.000"	"7.63788114083414"	"15"	"0.0007076"	"0.007003"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAYFVVPTPLLEDDVK"	"[R].lPAYFVVPTPLLEDDVk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q5FVM6"	"Myotubularin-related protein 12 OS=Rattus norvegicus OX=10116 GN=Mtmr12 PE=1 SV=2"	"Q5FVM6"	"Myotubularin-related protein 12 OS=Rattus norvegicus OX=10116 GN=Mtmr12 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"792.12689"	"2374.36612"	"2374.36741"	"-0.54"	"-0.00043"	"10/140"	"10"	"140"	"151864.420837402"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"90.6020"	"31259"	"31259"	"31251"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"4.6"	""	"6.1"	""	"8.3"	""	"8.7"	"9.0"	""	"775"	"22"	"35.000"	"28.000"	"0.273698052276898"	"16"	"0.0001889"	"0.001103"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPTPATFPVYDPASGAK"	"[R].wLPTPATFPVYDPASGAk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P51650"	"Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2"	"P51650"	"Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.77051"	"2376.29697"	"2376.30039"	"-1.44"	"-0.00114"	"13/158"	"13"	"158"	"899859.401306152"	"HCD"	"MS2"	"5.817894"	"34.3"	"100.000"	"77.9515"	"26210"	"26210"	"26185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.0"	""	"50.2"	""	"47.0"	""	"46.5"	"0.5"	"60.9"	"65.4"	""	"1280"	"49"	"38.000"	"31.000"	"0.000796489351533686"	"16"	"0"	"6.239E-05"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPTPATFPVYDPASGAK"	"[R].wLPTPATFPVYDPASGAk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P51650"	"Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2"	"P51650"	"Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.77142"	"2376.29972"	"2376.30039"	"-0.28"	"-0.00022"	"14/158"	"14"	"158"	"1251727.25402832"	"HCD"	"MS2"	"0"	"44.8"	"100.000"	"77.9181"	"26247"	"26247"	"26229"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.9"	""	"63.7"	""	"64.3"	""	"64.1"	""	"74.1"	"89.1"	""	"1274"	"53"	"38.000"	"31.000"	"0.000317058523131582"	"16"	"0"	"0.0001626"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPTPATFPVYDPASGAK"	"[R].wLPTPATFPVYDPASGAk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P51650"	"Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2"	"P51650"	"Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"3"	"792.78058"	"2376.32718"	"2376.30039"	"11.28"	"0.00893"	"12/158"	"12"	"158"	"432784.621704102"	"HCD"	"MS2"	"18.53679"	"22.0"	"100.000"	"77.7610"	"26132"	"26132"	"26105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.9"	""	"32.9"	""	"33.2"	""	"31.1"	""	"37.4"	"44.6"	""	"1140"	"10"	"37.000"	"30.000"	"6.20690153200057"	"15"	"0.00274"	"0.04427"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTHGDSPSEALIGPLGQVK"	"[R].lTHGDSPSEALIGPLGQVk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"793.12115"	"2377.34891"	"2377.34913"	"-0.09"	"-0.00007"	"19/162"	"19"	"162"	"1655195.8147583"	"HCD"	"MS2"	"0"	"74.1"	"100.000"	"51.9393"	"15631"	"15631"	"15602"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.5"	""	"95.7"	""	"97.0"	""	"127.1"	""	"133.9"	"140.9"	""	"959"	"42"	"36.000"	"29.000"	"0.00314621655192243"	"16"	"0"	"1.913E-06"	"1.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDSGAPIKIPVGPETLGR"	"[K].vLDSGAPIkIPVGPETLGR.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.14514"	"2377.42087"	"2377.42190"	"-0.43"	"-0.00034"	"22/190"	"22"	"190"	"3258913.18988037"	"HCD"	"MS2"	"21.06889"	"142.9"	"100.000"	"60.1610"	"19019"	"19019"	"18995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"358.6"	""	"281.2"	""	"272.5"	""	"128.2"	""	"144.5"	"157.1"	""	"406"	"40"	"33.000"	"26.000"	"0.00188580176516327"	"15"	"0"	"1.276E-06"	"1.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDSGAPIKIPVGPETLGR"	"[K].vLDSGAPIkIPVGPETLGR.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.14545"	"2377.42179"	"2377.42190"	"-0.05"	"-0.00004"	"21/190"	"21"	"190"	"3100858.38220215"	"HCD"	"MS2"	"4.676738"	"143.2"	"100.000"	"60.0669"	"18927"	"18927"	"18905"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"330.8"	""	"319.7"	""	"291.3"	""	"120.1"	""	"145.2"	"142.0"	""	"401"	"33"	"33.000"	"26.000"	"0.0101184590161487"	"15"	"0"	"4.239E-06"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPQNIDILQNPLLIK"	"[R].tISPQNIDILQNPLLIk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.48474"	"2378.43967"	"2378.44230"	"-1.11"	"-0.00088"	"14/166"	"14"	"166"	"581436.428527832"	"HCD"	"MS2"	"1.235887"	"17.6"	"100.000"	"82.2687"	"27970"	"27970"	"27952"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.1"	""	"29.1"	""	"24.0"	""	"30.3"	""	"27.0"	"29.6"	""	"286"	"51"	"31.000"	"24.000"	"0.000110239196076213"	"16"	"0"	"9.914E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPQNIDILQNPLLIK"	"[R].tISPQNIDILQNPLLIk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.48511"	"2378.44077"	"2378.44230"	"-0.64"	"-0.00051"	"15/166"	"15"	"166"	"642650.407104492"	"HCD"	"MS2"	"5.728848"	"18.1"	"100.000"	"81.9728"	"27901"	"27901"	"27870"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.4"	""	"25.5"	""	"24.5"	""	"25.5"	""	"36.3"	"33.4"	""	"269"	"47"	"31.000"	"24.000"	"0.000282307414347364"	"15"	"0"	"6.591E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPQNIDILQNPLLIK"	"[R].tISPQNIDILQNPLLIk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.48529"	"2378.44132"	"2378.44230"	"-0.41"	"-0.00033"	"13/166"	"13"	"166"	"189051.961669922"	"HCD"	"MS2"	"6.544033"	"9.3"	"100.000"	"82.3815"	"28067"	"28067"	"28046"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.6"	""	"10.4"	""	"14.0"	""	"14.5"	""	"17.7"	"18.8"	""	"269"	"35"	"31.000"	"24.000"	"0.00428274566672164"	"15"	"0.0001859"	"0.0003309"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPQNIDILQNPLLIK"	"[R].tISPQNIDILQNPLLIk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.48584"	"2378.44297"	"2378.44230"	"0.28"	"0.00022"	"13/166"	"13"	"166"	"746541.199523926"	"HCD"	"MS2"	"6.701393"	"21.8"	"100.000"	"81.9687"	"27848"	"27848"	"27824"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.4"	""	"37.5"	""	"30.9"	""	"35.1"	""	"32.9"	"38.4"	""	"260"	"42"	"31.000"	"24.000"	"0.000835494032512126"	"15"	"0"	"3.722E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNEHFLNTTDFLDTIK"	"[K].lNEHFLNTTDFLDTIk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.0952"	"0.0000"	"1"	"1"	"1"	"793.76941"	"2379.29367"	"2379.29603"	"-0.99"	"-0.00079"	"15/170"	"15"	"170"	"1632861.18145752"	"HCD"	"MS2"	"7.907895"	"68.9"	"100.000"	"71.0546"	"23457"	"23457"	"23434"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.3"	""	"82.7"	""	"93.0"	""	"115.8"	""	"124.0"	"136.0"	""	"1259"	"21"	"37.000"	"31.000"	"0.46131304361094"	""	"0"	"4.776E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNEHFLNTTDFLDTIK"	"[K].lNEHFLNTTDFLDTIk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.4815"	"0.0000"	"1"	"1"	"1"	"793.77002"	"2379.29551"	"2379.29603"	"-0.22"	"-0.00018"	"15/170"	"15"	"170"	"1740914.69177246"	"HCD"	"MS2"	"5.752927"	"66.5"	"100.000"	"71.1207"	"23432"	"23432"	"23411"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.1"	""	"82.6"	""	"91.3"	""	"122.9"	""	"118.1"	"122.0"	""	"1247"	"27"	"37.000"	"30.000"	"0.122415513260728"	"28"	"0"	"3.369E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNEHFLNTTDFLDTIK"	"[K].lNEHFLNTTDFLDTIk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"793.77063"	"2379.29734"	"2379.29603"	"0.55"	"0.00043"	"18/170"	"18"	"170"	"4050192.44842529"	"HCD"	"MS2"	"4.764937"	"116.0"	"100.000"	"70.8050"	"23303"	"23303"	"23283"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"217.1"	""	"165.2"	""	"153.6"	""	"175.2"	""	"192.5"	"193.5"	""	"1254"	"54"	"37.000"	"30.000"	"0.000267465358288598"	"20"	"0"	"1.109E-06"	"1.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNEHFLNTTDFLDTIK"	"[K].lNEHFLNTTDFLDTIk.[S]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.77075"	"2379.29770"	"2379.29603"	"0.70"	"0.00056"	"9/170"	"9"	"170"	"3922620.11694336"	"HCD"	"MS2"	"3.100659"	"107.6"	"100.000"	"70.6925"	"23309"	"23309"	"23290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"213.1"	""	"152.9"	""	"143.9"	""	"164.3"	""	"165.4"	"177.9"	""	"1250"	"49"	"37.000"	"30.000"	"0.000870723001840815"	"16"	"0"	"7.478E-06"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGNPWDPNILYGPLHTK"	"[R].vGNPWDPNILYGPLHTk.[Q]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.77856"	"2379.32114"	"2379.32252"	"-0.58"	"-0.00046"	"23/176"	"23"	"176"	"5916315.08203125"	"HCD"	"MS2"	"0"	"141.4"	"100.000"	"64.8371"	"20875"	"20875"	"20857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"220.9"	""	"209.2"	""	"226.5"	""	"203.4"	""	"223.2"	"263.4"	""	"1133"	"59"	"37.000"	"30.000"	"6.81082802210765E-05"	"16"	"0"	"1.174E-07"	"1.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGNPWDPNILYGPLHTK"	"[R].vGNPWDPNILYGPLHTk.[Q]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.77930"	"2379.32334"	"2379.32252"	"0.34"	"0.00027"	"22/176"	"22"	"176"	"6453180.65740967"	"HCD"	"MS2"	"0.5049727"	"154.5"	"100.000"	"64.7343"	"20886"	"20886"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"251.6"	""	"223.5"	""	"231.5"	""	"235.3"	"1.0"	"250.1"	"267.7"	""	"1120"	"62"	"37.000"	"30.000"	"3.31274515138265E-05"	"16"	"0"	"1.18E-07"	"1.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLVKPTPVNVPISQK"	"[K].aTLVkPTPVNVPISQk.[F]"	"N-Term(TMT6plex); K5(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.83563"	"2379.49234"	"2379.49423"	"-0.79"	"-0.00063"	"15/166"	"15"	"166"	"742826.641296387"	"HCD"	"MS2"	"0"	"55.9"	"100.000"	"45.0187"	"12814"	"12814"	"12784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.0"	""	"93.0"	""	"89.8"	""	"76.8"	"0.4"	"87.1"	"88.2"	""	"92"	"32"	"26.000"	"19.000"	"0.00277816369513135"	"15"	"0"	"6.918E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLVKPTPVNVPISQK"	"[K].aTLVkPTPVNVPISQk.[F]"	"N-Term(TMT6plex); K5(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.83630"	"2379.49436"	"2379.49423"	"0.05"	"0.00004"	"15/166"	"15"	"166"	"1308475.20330811"	"HCD"	"MS2"	"9.659401"	"83.3"	"100.000"	"45.1839"	"12930"	"12930"	"12907"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.6"	""	"138.6"	""	"133.9"	""	"118.4"	""	"120.5"	"140.9"	""	"88"	"31"	"26.000"	"19.000"	"0.00340763191033108"	"14"	"0"	"0.0001342"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTLSNAVSSLASTGLSLTK"	"[R].aTTLSNAVSSLASTGLSLTk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"0"	"3"	"3"	"0.9877"	"0.0000"	"1"	"1"	"1"	"794.12817"	"2380.36997"	"2380.36993"	"0.02"	"0.00001"	"19/214"	"19"	"214"	"564362.138061523"	"HCD"	"MS2"	"12.02076"	"18.8"	"100.000"	"80.7433"	"27348"	"27348"	"27328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.2"	""	"25.0"	""	"22.2"	""	"38.5"	""	"31.2"	"38.1"	""	"773"	"81"	"35.000"	"28.000"	"3.03493572776793E-07"	"19"	"0"	"7.46E-07"	"1.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENYPIPELGPNDVLLK"	"[R].lENYPIPELGPNDVLLk.[M]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"794.79352"	"2382.36600"	"2382.36847"	"-1.04"	"-0.00082"	"12/178"	"12"	"178"	"836961.290161133"	"HCD"	"MS2"	"4.073188"	"23.5"	"100.000"	"79.5216"	"26901"	"26901"	"26879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.3"	""	"42.2"	""	"36.3"	""	"33.5"	""	"36.5"	"34.9"	""	"868"	"39"	"36.000"	"29.000"	"0.00589508035818825"	"16"	"0"	"3.569E-05"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENYPIPELGPNDVLLK"	"[R].lENYPIPELGPNDVLLk.[M]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"794.79456"	"2382.36911"	"2382.36847"	"0.27"	"0.00021"	"13/178"	"13"	"178"	"974813.427429199"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"79.5777"	"26873"	"26873"	"26849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.9"	""	"48.7"	""	"45.3"	""	"36.5"	""	"41.3"	"39.4"	""	"831"	"45"	"36.000"	"29.000"	"0.00122340718884339"	"25"	"0"	"2.363E-05"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSQSLLPAIVELAEDAK"	"[R].qLSQSLLPAIVELAEDAk.[W]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.13184"	"2383.38095"	"2383.38485"	"-1.63"	"-0.00130"	"5/196"	"5"	"196"	"169206.159179688"	"HCD"	"MS2"	"4.674446"	"3.6"	"100.000"	"98.7784"	"33825"	"33825"	"33821"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"3.3"	""	"2.5"	""	"6.7"	""	"6.5"	"9.0"	""	"631"	"17"	"34.000"	"28.000"	"0.662215533283222"	"14"	"0.0002277"	"0.001327"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSQSLLPAIVELAEDAK"	"[R].qLSQSLLPAIVELAEDAk.[W]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"Q4QQT4"	"Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r1b PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.13361"	"2383.38626"	"2383.38485"	"0.59"	"0.00047"	"10/196"	"10"	"196"	"126870.686279297"	"HCD"	"MS2"	"5.867599"	"3.3"	"100.000"	"99.0334"	"33899"	"33899"	"33891"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	"1.7"	""	"3.8"	""	"6.4"	""	"6.8"	"9.4"	""	"567"	"24"	"34.000"	"27.000"	"0.101520339918597"	"14"	"0.0001889"	"0.0009072"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDKLFPGQQYLYVLR"	"[R].aDDkLFPGQQYLYVLR.[A]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.44849"	"2384.33091"	"2384.33784"	"-2.91"	"-0.00231"	"10/146"	"10"	"146"	"1612275.8638916"	"HCD"	"MS2"	"22.58729"	"101.2"	"100.000"	"67.7229"	"22097"	"22097"	"22074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.1"	""	"164.2"	""	"119.9"	""	"159.7"	"1.5"	"170.0"	"147.7"	""	"1029"	"11"	"37.000"	"30.000"	"4.5434460876535"	"13"	"0"	"5.561E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDKLFPGQQYLYVLR"	"[R].aDDkLFPGQQYLYVLR.[A]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.44916"	"2384.33292"	"2384.33784"	"-2.06"	"-0.00164"	"11/146"	"11"	"146"	"1269943.69659424"	"HCD"	"MS2"	"35.30119"	"73.2"	"100.000"	"67.4179"	"21973"	"21973"	"21949"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"195.4"	""	"138.9"	""	"103.3"	""	"93.3"	""	"74.7"	"82.8"	""	"1017"	"33"	"37.000"	"30.000"	"0.0245635400837225"	"15"	"0"	"1.745E-05"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDKLFPGQQYLYVLR"	"[R].aDDkLFPGQQYLYVLR.[A]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.44971"	"2384.33457"	"2384.33784"	"-1.37"	"-0.00109"	"16/146"	"16"	"146"	"1623579.61688232"	"HCD"	"MS2"	"28.35888"	"98.9"	"100.000"	"67.8810"	"22110"	"22110"	"22090"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"206.5"	""	"164.2"	""	"116.4"	""	"147.6"	""	"155.2"	"143.5"	""	"1002"	"8"	"36.000"	"30.000"	"7.20838087706178"	"13"	"0"	"6.337E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDKLFPGQQYLYVLR"	"[R].aDDkLFPGQQYLYVLR.[A]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.45062"	"2384.33731"	"2384.33784"	"-0.22"	"-0.00017"	"14/146"	"14"	"146"	"838059.616516113"	"HCD"	"MS2"	"0"	"55.8"	"100.000"	"67.5612"	"21981"	"21981"	"21955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.2"	""	"111.8"	""	"79.1"	""	"82.3"	"0.0"	"66.0"	"62.7"	""	"971"	"8"	"36.000"	"29.000"	"7.33143914846693"	"13"	"0.0001889"	"0.0004908"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HWLDSPWPGFFTLDGQPR"	"[K].hWLDSPWPGFFTLDGQPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"795.73682"	"2385.19590"	"2385.19777"	"-0.78"	"-0.00062"	"13/160"	"13"	"160"	"385481.620239258"	"HCD"	"MS2"	"19.48101"	"12.3"	"100.000"	"78.7932"	"26553"	"26553"	"26529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.0"	""	"17.5"	""	"18.1"	""	"20.8"	""	"22.2"	"26.6"	""	"1303"	"55"	"38.000"	"31.000"	"0.000190947694928059"	"19"	"0"	"2.637E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HWLDSPWPGFFTLDGQPR"	"[K].hWLDSPWPGFFTLDGQPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.73724"	"2385.19718"	"2385.19777"	"-0.25"	"-0.00020"	"14/160"	"14"	"160"	"347000.278564453"	"HCD"	"MS2"	"20.05782"	"11.1"	"100.000"	"78.7485"	"26586"	"26586"	"26559"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"12.5"	""	"21.4"	""	"17.9"	""	"19.6"	"22.8"	""	"1315"	"27"	"38.000"	"31.000"	"0.119921142427516"	"14"	"0"	"7.192E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLAQAMFDHIPVGVGSK"	"[K].eQLAQAMFDHIPVGVGSk.[G]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.77148"	"2385.29990"	"2385.30007"	"-0.07"	"-0.00006"	"15/200"	"15"	"200"	"841415.851867676"	"HCD"	"MS2"	"32.15713"	"60.2"	"100.000"	"64.4754"	"20728"	"20728"	"20697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.5"	""	"81.2"	""	"94.8"	""	"67.7"	""	"114.0"	"102.4"	""	"1283"	"27"	"38.000"	"31.000"	"0.121393843136075"	"14"	"0"	"1.956E-05"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALFAQINQGESITHALK"	"[R].sALFAQINQGESITHALk.[H]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"796.12177"	"2386.35074"	"2386.34946"	"0.54"	"0.00043"	"21/186"	"21"	"186"	"3318862.46154785"	"HCD"	"MS2"	"26.27894"	"139.9"	"100.000"	"58.4258"	"18315"	"18315"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.3"	""	"258.2"	""	"191.5"	""	"146.6"	"1.5"	"279.8"	"245.6"	""	"951"	"36"	"36.000"	"29.000"	"0.0129762893572522"	"15"	"0"	"5.204E-06"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALFAQINQGESITHALK"	"[R].sALFAQINQGESITHALk.[H]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"796.12299"	"2386.35440"	"2386.34946"	"2.07"	"0.00165"	"13/186"	"13"	"186"	"3198850.86376953"	"HCD"	"MS2"	"5.659708"	"140.7"	"100.000"	"58.2523"	"18190"	"18190"	"18171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"197.2"	""	"216.4"	""	"171.8"	""	"201.0"	""	"281.4"	"267.6"	""	"912"	"30"	"36.000"	"29.000"	"0.0434475050794785"	"17"	"0"	"5.926E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPNTFWMNPQYLIK"	"[R].nYPNTFWMNPQYLIk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1194.13086"	"2387.25444"	"2387.26223"	"-3.26"	"-0.00389"	"7/140"	"7"	"140"	"90989.6096191406"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"79.7459"	"26942"	"26942"	"26913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.8"	""	"9.5"	""	"7.2"	""	"6.2"	""	"10.4"	"10.5"	""	"1360"	"11"	"38.000"	"31.000"	"5.2784803930751"	"13"	"0.001217"	"0.01711"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPNTFWMNPQYLIK"	"[R].nYPNTFWMNPQYLIk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"796.42432"	"2387.25840"	"2387.26223"	"-1.61"	"-0.00128"	"15/140"	"15"	"140"	"1299194.80291748"	"HCD"	"MS2"	"1.921814"	"37.5"	"100.000"	"79.6863"	"26917"	"26917"	"26897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.3"	""	"65.0"	""	"52.2"	""	"35.7"	"0.4"	"63.6"	"72.8"	""	"1369"	"40"	"38.000"	"31.000"	"0.00745372648886735"	"19"	"0"	"1.403E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPNTFWMNPQYLIK"	"[R].nYPNTFWMNPQYLIk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"796.42444"	"2387.25876"	"2387.26223"	"-1.45"	"-0.00116"	"12/140"	"12"	"140"	"1108566.27832031"	"HCD"	"MS2"	"3.856763"	"31.2"	"100.000"	"79.6370"	"26948"	"26948"	"26927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.6"	""	"55.1"	""	"47.4"	""	"37.8"	""	"44.8"	"55.8"	""	"1373"	"42"	"38.000"	"31.000"	"0.00388723271924761"	"19"	"0"	"3.065E-05"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPNTFWMNPQYLIK"	"[R].nYPNTFWMNPQYLIk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1194.13342"	"2387.25957"	"2387.26223"	"-1.11"	"-0.00133"	"6/140"	"6"	"140"	"101427.795227051"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"79.8100"	"27019"	"27019"	"26991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.6"	""	"11.9"	""	"11.1"	""	"6.2"	""	"12.0"	"12.9"	""	"1373"	"6"	"38.000"	"31.000"	"17.6051829106942"	"13"	"0.00103"	"0.0126"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPNTFWMNPQYLIK"	"[R].nYPNTFWMNPQYLIk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"796.42535"	"2387.26151"	"2387.26223"	"-0.30"	"-0.00024"	"11/140"	"11"	"140"	"370943.72064209"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"79.9461"	"27074"	"27074"	"27055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.6"	""	"22.3"	""	"19.6"	""	"15.4"	""	"23.1"	"24.2"	""	"1380"	"29"	"38.000"	"31.000"	"0.0825750966601998"	"18"	"0.0001889"	"0.0004607"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPNTFWMNPQYLIK"	"[R].nYPNTFWMNPQYLIk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"796.42603"	"2387.26352"	"2387.26223"	"0.54"	"0.00043"	"10/140"	"10"	"140"	"213656.807800293"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"80.0025"	"27046"	"27046"	"27025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.0"	""	"16.1"	""	"15.6"	""	"9.6"	""	"21.6"	"13.1"	""	"1371"	"15"	"38.000"	"31.000"	"2.31210450085655"	"14"	"0.0001889"	"0.0007283"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPVAGFRPLQDPPFADLVR"	"[R].yPVAGFRPLQDPPFADLVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZXK7"	"E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus OX=10116 GN=Rnf123 PE=1 SV=1"	"D3ZXK7"	"E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus OX=10116 GN=Rnf123 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"796.44092"	"2387.30820"	"2387.30732"	"0.37"	"0.00029"	"4/178"	"4"	"178"	"603660.369506836"	"HCD"	"MS2"	"6.033411"	"31.7"	"100.000"	"71.1345"	"23438"	"23438"	"23411"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.4"	""	"36.5"	""	"39.8"	""	"61.3"	"2.3"	"64.6"	"52.4"	""	"1265"	"0"	"38.000"	"31.000"	"61.810254225455"	"13"	"0.0008731"	"0.009517"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTAVSNNAGVDNFGLGLLLR"	"[K].dLTAVSNNAGVDNFGLGLLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"796.77448"	"2388.30887"	"2388.30844"	"0.18"	"0.00014"	"14/210"	"14"	"210"	"274642.172180176"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"86.2598"	"29589"	"29589"	"29569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.5"	""	"9.3"	""	"3.7"	""	"7.2"	""	"6.4"	"8.2"	""	"1257"	"56"	"37.000"	"30.000"	"0.000172705147522486"	"18"	"0"	"4.538E-06"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTAVSNNAGVDNFGLGLLLR"	"[K].dLTAVSNNAGVDNFGLGLLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"796.77484"	"2388.30997"	"2388.30844"	"0.64"	"0.00051"	"13/210"	"13"	"210"	"146883.11315918"	"HCD"	"MS2"	"4.416416"	"3.8"	"100.000"	"86.3505"	"29679"	"29679"	"29654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.6"	""	"6.5"	""	"5.4"	""	"5.2"	""	"6.8"	"10.0"	""	"1266"	"50"	"38.000"	"31.000"	"0.000644768348638256"	"19"	"0"	"4.432E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPMSTVFYPSDGVATEK"	"[R].sVPmSTVFYPSDGVATEk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K18(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"797.09271"	"2389.26358"	"2389.23613"	"11.49"	"0.00915"	"8/168"	"8"	"168"	"1248712.40844727"	"HCD"	"MS2"	"11.6185"	"50.9"	"100.000"	"59.0344"	"18559"	"18559"	"18533"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.9"	""	"78.0"	""	"73.1"	""	"67.6"	"0.3"	"86.7"	"87.3"	""	"1426"	"15"	"38.000"	"31.000"	"2.32857124338876"	"15"	"0.006001"	"0.2048"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPLLDTGDIIIDGGNSEYR"	"[K].lVPLLDTGDIIIDGGNSEYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.09753"	"2389.27805"	"2389.28122"	"-1.33"	"-0.00106"	"8/184"	"8"	"184"	"127928.747009277"	"HCD"	"MS2"	"19.42799"	"3.2"	"100.000"	"84.0221"	"28737"	"28737"	"28709"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.9"	""	"1.4"	""	"5.0"	""	"5.6"	""	"8.1"	"7.0"	""	"1404"	"5"	"38.000"	"31.000"	"20.7652475151918"	"13"	"0.0008731"	"0.0086"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPLLDTGDIIIDGGNSEYR"	"[K].lVPLLDTGDIIIDGGNSEYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.09766"	"2389.27842"	"2389.28122"	"-1.17"	"-0.00094"	"5/184"	"5"	"184"	"229776.927856445"	"HCD"	"MS2"	"8.481749"	"5.2"	"100.000"	"83.9467"	"28655"	"28655"	"28628"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.9"	""	"4.1"	""	"9.2"	""	"7.9"	""	"13.2"	"9.3"	""	"1404"	"21"	"38.000"	"31.000"	"0.537448818051702"	"14"	"0.0001889"	"0.0005626"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFSLAILNVGAPAAGMNAAVR"	"[K].sNFSLAILNVGAPAAGmNAAVR.[S]"	"N-Term(TMT6plex); M17(Oxidation)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"797.09894"	"2389.28226"	"2389.28593"	"-1.54"	"-0.00122"	"13/214"	"13"	"214"	"494988.019958496"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"68.0974"	"22199"	"22199"	"22170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.6"	""	"26.4"	""	"25.0"	""	"30.5"	""	"34.3"	"32.3"	""	"1412"	"22"	"38.000"	"31.000"	"0.412861799406004"	"23"	"0.0001889"	"0.0004163"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYNAELESGNQFVLYR"	"[K].kYNAELESGNQFVLYR.[V]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"1"	"3"	"3"	"0.9839"	"0.0000"	"1"	"1"	"1"	"797.10065"	"2389.28739"	"2389.29162"	"-1.77"	"-0.00141"	"14/156"	"14"	"156"	"721139.074951172"	"HCD"	"MS2"	"0"	"46.8"	"100.000"	"46.4195"	"13383"	"13383"	"13352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.4"	""	"77.6"	""	"46.5"	""	"51.1"	""	"74.1"	"68.8"	""	"1388"	"62"	"38.000"	"31.000"	"4.68122451222358E-05"	"18"	"0"	"3.375E-07"	"1.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYNAELESGNQFVLYR"	"[K].kYNAELESGNQFVLYR.[V]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.10254"	"2389.29306"	"2389.29162"	"0.61"	"0.00048"	"20/156"	"20"	"156"	"495595.653808594"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"46.7575"	"13569"	"13569"	"13538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.4"	""	"62.9"	""	"37.2"	""	"50.0"	""	"50.0"	"58.8"	""	"1365"	"38"	"38.000"	"31.000"	"0.0102825932267245"	"15"	"0"	"3.683E-06"	"1.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIALSIDSVEDHFAWSK"	"[K].lIALSIDSVEDHFAWSk.[D]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"797.10944"	"2389.31375"	"2389.31677"	"-1.26"	"-0.00100"	"10/150"	"10"	"150"	"267343.407104492"	"HCD"	"MS2"	"7.517517"	"11.7"	"100.000"	"81.6105"	"27753"	"27753"	"27726"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.6"	""	"17.5"	""	"12.8"	""	"20.6"	""	"17.8"	"29.4"	""	"1249"	"18"	"37.000"	"30.000"	"1.08027031632983"	"16"	"0.0001889"	"0.0006263"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIALSIDSVEDHFAWSK"	"[K].lIALSIDSVEDHFAWSk.[D]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.11194"	"2389.32126"	"2389.31677"	"1.88"	"0.00150"	"14/150"	"14"	"150"	"223026.696350098"	"HCD"	"MS2"	"7.553504"	"11.6"	"100.000"	"81.4352"	"27631"	"27631"	"27600"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.3"	""	"18.3"	""	"16.7"	""	"16.9"	""	"19.9"	"25.8"	""	"1182"	"61"	"37.000"	"30.000"	"4.50388694925019E-05"	"17"	"0"	"4.314E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIAQGGVLPNIQAVLLPK"	"[RK].vTIAQGGVLPNIQAVLLPk.[K]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"8"	"P02262"	"Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q4FZT6; Q00728; P0C169; Q64598; P0C170; A9UMV8; P02262; P0CC09"	"Histone H2A type 3 OS=Rattus norvegicus OX=10116 PE=2 SV=3; Histone H2A type 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Histone H2A type 1-C OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 1-F OS=Rattus norvegicus OX=10116 PE=3 SV=3; Histone H2A type 1-E OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A.J OS=Rattus norvegicus OX=10116 GN=H2afj PE=2 SV=1; Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 2-A OS=Rattus norvegicus OX=10116 GN=Hist2h2aa3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.16895"	"2389.49228"	"2389.49467"	"-1.00"	"-0.00080"	"8/172"	"8"	"172"	"570338.761901855"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"84.9200"	"29052"	"29052"	"29035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.9"	""	"13.0"	""	"17.5"	""	"23.9"	""	"29.2"	"25.5"	""	"134"	"32"	"28.000"	"21.000"	"0.00461397038550665"	"14"	"0"	"2.314E-05"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIAQGGVLPNIQAVLLPK"	"[RK].vTIAQGGVLPNIQAVLLPk.[K]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"8"	"P02262"	"Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q4FZT6; Q00728; P0C169; Q64598; P0C170; A9UMV8; P02262; P0CC09"	"Histone H2A type 3 OS=Rattus norvegicus OX=10116 PE=2 SV=3; Histone H2A type 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Histone H2A type 1-C OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 1-F OS=Rattus norvegicus OX=10116 PE=3 SV=3; Histone H2A type 1-E OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A.J OS=Rattus norvegicus OX=10116 GN=H2afj PE=2 SV=1; Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 2-A OS=Rattus norvegicus OX=10116 GN=Hist2h2aa3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.16931"	"2389.49338"	"2389.49467"	"-0.54"	"-0.00043"	"15/172"	"15"	"172"	"896580.559020996"	"HCD"	"MS2"	"0.7524441"	"17.3"	"100.000"	"84.9307"	"29107"	"29107"	"29090"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.9"	""	"15.7"	""	"18.3"	""	"31.5"	""	"42.0"	"42.2"	""	"122"	"48"	"27.000"	"20.000"	"0.000101936527472953"	"15"	"0"	"4.303E-06"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIAQGGVLPNIQAVLLPK"	"[RK].vTIAQGGVLPNIQAVLLPk.[K]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"8"	"P02262"	"Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q4FZT6; Q00728; P0C169; Q64598; P0C170; A9UMV8; P02262; P0CC09"	"Histone H2A type 3 OS=Rattus norvegicus OX=10116 PE=2 SV=3; Histone H2A type 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Histone H2A type 1-C OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 1-F OS=Rattus norvegicus OX=10116 PE=3 SV=3; Histone H2A type 1-E OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A.J OS=Rattus norvegicus OX=10116 GN=H2afj PE=2 SV=1; Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 2-A OS=Rattus norvegicus OX=10116 GN=Hist2h2aa3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.16931"	"2389.49338"	"2389.49467"	"-0.54"	"-0.00043"	"17/172"	"17"	"172"	"1355868.59313965"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"84.6127"	"28926"	"28926"	"28907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.6"	""	"25.9"	""	"19.7"	""	"59.1"	""	"59.0"	"58.5"	""	"122"	"58"	"27.000"	"20.000"	"9.10604589843189E-06"	"16"	"0"	"1.343E-06"	"1.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTIAQGGVLPNIQAVLLPK"	"[RK].vTIAQGGVLPNIQAVLLPk.[K]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"8"	"P02262"	"Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q4FZT6; Q00728; P0C169; Q64598; P0C170; A9UMV8; P02262; P0CC09"	"Histone H2A type 3 OS=Rattus norvegicus OX=10116 PE=2 SV=3; Histone H2A type 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Histone H2A type 1-C OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 1-F OS=Rattus norvegicus OX=10116 PE=3 SV=3; Histone H2A type 1-E OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A.J OS=Rattus norvegicus OX=10116 GN=H2afj PE=2 SV=1; Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 2-A OS=Rattus norvegicus OX=10116 GN=Hist2h2aa3 PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"797.16956"	"2389.49411"	"2389.49467"	"-0.23"	"-0.00019"	"14/172"	"14"	"172"	"493702.676025391"	"HCD"	"MS2"	"100"	"11.1"	"100.000"	"84.6167"	"28979"	"28979"	"28960"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.3"	""	"10.7"	""	"16.6"	""	"22.3"	""	"26.1"	"21.4"	""	"122"	"42"	"27.000"	"20.000"	"0.000380478249644276"	"16"	"0"	"1.396E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALYPDLGEPNYILNIK"	"[R].vALYPDLGEPNYILNIk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.46326"	"2390.37522"	"2390.37355"	"0.70"	"0.00055"	"11/146"	"11"	"146"	"411365.054321289"	"HCD"	"MS2"	"9.535328"	"14.3"	"100.000"	"81.7747"	"27769"	"27769"	"27744"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.5"	""	"23.3"	""	"12.8"	""	"32.2"	""	"25.1"	"28.1"	""	"759"	"20"	"35.000"	"28.000"	"0.421902190503364"	"14"	"0.0001889"	"0.0006756"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALYPDLGEPNYILNIK"	"[R].vALYPDLGEPNYILNIk.[R]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"Q7TMA5"	"Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.46362"	"2390.37632"	"2390.37355"	"1.16"	"0.00092"	"14/146"	"14"	"146"	"388146.185913086"	"HCD"	"MS2"	"13.56379"	"15.4"	"100.000"	"81.7235"	"27799"	"27799"	"27774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.4"	""	"18.8"	""	"18.0"	""	"34.1"	""	"26.2"	"23.8"	""	"738"	"36"	"35.000"	"28.000"	"0.00877054065764579"	"15"	"0.0001859"	"0.0003728"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIFQEESEIPASVFVK"	"[K].vLIFQEESEIPASVFVk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"798.46234"	"2393.37247"	"2393.37322"	"-0.31"	"-0.00025"	"18/166"	"18"	"166"	"496284.777587891"	"HCD"	"MS2"	"27.69913"	"13.8"	"100.000"	"84.8524"	"29075"	"29075"	"29058"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.9"	""	"17.3"	""	"19.2"	""	"23.6"	""	"28.7"	"28.1"	""	"778"	"64"	"35.000"	"28.000"	"1.59202396634974E-05"	"17"	"0"	"8.154E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GATYGKPVHHGVNQLK"	"[K].gATYGkPVHHGVNQLk.[F]"	"N-Term(TMT6plex); K6(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"798.47101"	"2393.39847"	"2393.40206"	"-1.50"	"-0.00120"	"5/140"	"5"	"140"	"104052.727172852"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"27.2908"	"5626"	"5626"	"5597"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.8"	""	"16.2"	""	"14.6"	""	"14.3"	""	"16.6"	"13.5"	""	"533"	"18"	"34.000"	"27.000"	"0.386987746087133"	"14"	"0.0008731"	"0.009136"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GATYGKPVHHGVNQLK"	"[K].gATYGkPVHHGVNQLk.[F]"	"N-Term(TMT6plex); K6(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.10547"	"2393.40005"	"2393.40206"	"-0.84"	"-0.00050"	"9/140"	"9"	"140"	"1629319.22149658"	"HCD"	"MS2"	"7.224832"	"78.0"	"100.000"	"27.3241"	"5674"	"5674"	"5655"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.5"	""	"102.4"	""	"114.0"	""	"122.8"	""	"140.2"	"121.9"	""	"528"	"7"	"34.000"	"27.000"	"5.08866577082407"	"13"	"0.0001859"	"0.0003366"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GATYGKPVHHGVNQLK"	"[K].gATYGkPVHHGVNQLk.[F]"	"N-Term(TMT6plex); K6(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.10620"	"2393.40297"	"2393.40206"	"0.38"	"0.00023"	"10/140"	"10"	"140"	"1227976.38812256"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"27.3185"	"5637"	"5637"	"5613"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"91.3"	""	"79.1"	""	"85.8"	""	"78.5"	""	"98.9"	"91.7"	""	"517"	"4"	"34.000"	"27.000"	"10.9259836787658"	"13"	"0.0001308"	"0.0003032"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMEVYDLVSKPAIK"	"[K].iTMEVYDLVSkPAIk.[I]"	"N-Term(TMT6plex); K11(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"798.81372"	"2394.42661"	"2394.42852"	"-0.80"	"-0.00064"	"16/136"	"16"	"136"	"890070.889526367"	"HCD"	"MS2"	"0"	"66.9"	"100.000"	"70.1586"	"23040"	"23040"	"23011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.9"	""	"70.6"	""	"58.8"	""	"120.0"	"0.2"	"165.0"	"168.0"	""	"361"	"28"	"32.000"	"25.000"	"0.0296126454062517"	"14"	"0"	"4.76E-06"	"1.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMEVYDLVSKPAIK"	"[K].iTMEVYDLVSkPAIk.[I]"	"N-Term(TMT6plex); K11(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"P10252"	"CD48 antigen OS=Rattus norvegicus OX=10116 GN=Cd48 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"798.81451"	"2394.42899"	"2394.42852"	"0.20"	"0.00016"	"13/136"	"13"	"136"	"942607.629211426"	"HCD"	"MS2"	"0"	"67.1"	"100.000"	"70.0395"	"23043"	"23043"	"23018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.4"	""	"61.7"	""	"70.7"	""	"129.3"	""	"155.7"	"164.2"	""	"348"	"27"	"32.000"	"25.000"	"0.0383309204571301"	"14"	"0"	"2.469E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPPTMDTDGSYFLYSK"	"[K].nTPPTMDTDGSYFLYSk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1;Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.06696"	"2395.18631"	"2395.18918"	"-1.20"	"-0.00096"	"10/188"	"10"	"188"	"1728981.28796387"	"HCD"	"MS2"	"0"	"74.4"	"100.000"	"58.4220"	"18260"	"18260"	"18234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.7"	""	"112.5"	""	"115.7"	""	"86.6"	""	"127.7"	"130.2"	""	"1064"	"22"	"37.000"	"30.000"	"0.300546470600145"	"14"	"0.000523"	"0.003182"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKLPIVNESDELVAIIAR"	"[K].gkLPIVNESDELVAIIAR.[T]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.14844"	"2395.43076"	"2395.43247"	"-0.71"	"-0.00057"	"12/174"	"12"	"174"	"569348.989685059"	"HCD"	"MS2"	"7.925992"	"32.8"	"100.000"	"74.5802"	"24845"	"24845"	"24817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.7"	""	"37.8"	""	"35.4"	""	"55.8"	"1.7"	"63.7"	"69.9"	""	"336"	"30"	"32.000"	"25.000"	"0.0160069755555973"	"14"	"0"	"4.31E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADKDNCFATEGPNLVAR"	"[K].aADkDNcFATEGPNLVAR.[S]"	"N-Term(TMT6plex); K4(TMT6plex); C7(Methylthio)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.40778"	"2396.20877"	"2396.21027"	"-0.62"	"-0.00050"	"13/180"	"13"	"180"	"834408.230163574"	"HCD"	"MS2"	"34.12272"	"66.3"	"100.000"	"45.6287"	"13059"	"13059"	"13035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.7"	""	"106.2"	""	"83.9"	""	"91.1"	"0.2"	"107.8"	"109.6"	""	"1252"	"54"	"37.000"	"30.000"	"0.000270753658227915"	"16"	"0"	"7.286E-07"	"1.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDLGQDVIDFTGHSLALYR"	"[K].fDLGQDVIDFTGHSLALYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.41992"	"2396.24521"	"2396.24478"	"0.18"	"0.00015"	"13/196"	"13"	"196"	"296712.712280273"	"HCD"	"MS2"	"64.20477"	"12.8"	"100.000"	"84.8553"	"29025"	"29025"	"29003"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.6"	""	"18.0"	""	"19.7"	""	"25.7"	""	"17.8"	"26.9"	""	"1429"	"31"	"38.000"	"31.000"	"0.0620872226725063"	"14"	"0"	"9.697E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADKDNCFATEGPNLVAR"	"[K].aADkDncFATEGPNLVAR.[S]"	"N-Term(TMT6plex); K4(TMT6plex); N6(Deamidated); C7(Methylthio)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.4138"	"0.0000"	"1"	"1"	"1"	"799.73975"	"2397.20469"	"2397.19429"	"4.34"	"0.00347"	"11/180"	"11"	"180"	"655832.667175293"	"HCD"	"MS2"	"40.17102"	"51.8"	"100.000"	"45.9915"	"13256"	"13256"	"13237"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.5"	""	"83.8"	""	"64.3"	""	"66.3"	"2.0"	"97.5"	"78.6"	""	"1222"	"29"	"37.000"	"30.000"	"0.080917267800394"	"14"	"0"	"6.282E-05"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPASLAEPDFVMTDFAK"	"[K].sLPASLAEPDFVMTDFAk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"799.76373"	"2397.27665"	"2397.27761"	"-0.40"	"-0.00032"	"18/164"	"18"	"164"	"1550092.32757568"	"HCD"	"MS2"	"0"	"41.2"	"100.000"	"80.4888"	"27296"	"27296"	"27279"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.6"	""	"64.2"	""	"65.7"	""	"45.4"	""	"66.7"	"72.6"	""	"1376"	"60"	"38.000"	"31.000"	"6.73889109961184E-05"	"20"	"0"	"4.678E-06"	"1.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPASLAEPDFVMTDFAK"	"[K].sLPASLAEPDFVMTDFAk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.8448"	"0.0000"	"1"	"1"	"1"	"799.76398"	"2397.27738"	"2397.27761"	"-0.09"	"-0.00008"	"18/164"	"18"	"164"	"2297472.09466553"	"HCD"	"MS2"	"0.5466343"	"61.2"	"100.000"	"80.4617"	"27234"	"27234"	"27217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.8"	""	"90.5"	""	"100.6"	""	"58.7"	""	"116.5"	"100.9"	""	"1369"	"59"	"38.000"	"31.000"	"9.66881949294275E-05"	"25"	"0"	"2.727E-06"	"1.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPASLAEPDFVMTDFAK"	"[K].sLPASLAEPDFVMTDFAk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"799.76404"	"2397.27756"	"2397.27761"	"-0.02"	"-0.00001"	"15/164"	"15"	"164"	"1623447.80511475"	"HCD"	"MS2"	"7.586402"	"44.3"	"100.000"	"80.1425"	"27154"	"27154"	"27135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.6"	""	"75.0"	""	"69.2"	""	"40.1"	""	"82.8"	"70.4"	""	"1366"	"46"	"38.000"	"31.000"	"0.00173548435789017"	"20"	"0"	"2.468E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPASLAEPDFVMTDFAK"	"[K].sLPASLAEPDFVMTDFAk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"799.76514"	"2397.28086"	"2397.27761"	"1.36"	"0.00108"	"17/164"	"17"	"164"	"1408495.90600586"	"HCD"	"MS2"	"5.744454"	"41.3"	"100.000"	"80.1596"	"27110"	"27110"	"27089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.8"	""	"66.7"	""	"68.8"	""	"35.2"	""	"66.6"	"73.3"	""	"1361"	"54"	"38.000"	"31.000"	"0.000288953613265466"	"22"	"0"	"7.727E-06"	"1.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDGDEMTLADCNLLPK"	"[R].fLDGDEMTLADcNLLPk.[L]"	"N-Term(TMT6plex); C12(Methylthio); K17(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"800.40588"	"2399.20310"	"2399.20610"	"-1.25"	"-0.00100"	"6/152"	"6"	"152"	"95915.9506835938"	"HCD"	"MS2"	"19.24183"	"3.2"	"100.000"	"92.2420"	"31848"	"31848"	"31839"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.2"	""	"3.6"	""	"5.6"	""	"4.6"	""	"5.4"	"7.3"	""	"1214"	"15"	"37.000"	"30.000"	"2.07581521605821"	"16"	"0.001587"	"0.02145"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDGDEMTLADCNLLPK"	"[R].fLDGDEMTLADcNLLPk.[L]"	"N-Term(TMT6plex); C12(Methylthio); K17(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"800.40790"	"2399.20914"	"2399.20610"	"1.27"	"0.00101"	"6/152"	"6"	"152"	"108037.320617676"	"HCD"	"MS2"	"14.57524"	"3.4"	"100.000"	"92.0783"	"31768"	"31768"	"31754"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.4"	""	"4.4"	""	"5.4"	""	"5.3"	""	"4.8"	"6.8"	""	"1258"	"21"	"37.000"	"30.000"	"0.558021131571878"	"18"	"0.0006037"	"0.004001"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFLGVMPAYSAAEDALTTK"	"[R].gFLGVMPAYSAAEDALTTk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"800.76825"	"2400.29020"	"2400.28850"	"0.70"	"0.00056"	"12/160"	"12"	"160"	"269843.333984375"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"79.0921"	"26726"	"26726"	"26703"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.2"	""	"14.1"	""	"13.0"	""	"13.3"	""	"13.9"	"23.1"	""	"1435"	"25"	"38.000"	"31.000"	"0.219695876367306"	"16"	"0.0001859"	"0.0003639"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTFAEVTGLSPGVTYLFK"	"[R].nTFAEVTGLSPGVTYLFk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"801.45050"	"2402.33695"	"2402.33717"	"-0.09"	"-0.00007"	"10/194"	"10"	"194"	"198610.584350586"	"HCD"	"MS2"	"29.13701"	"9.3"	"100.000"	"82.9076"	"28282"	"28282"	"28253"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.7"	""	"15.8"	""	"11.3"	""	"19.0"	""	"13.6"	"17.3"	""	"1103"	"28"	"37.000"	"30.000"	"0.0923730996128579"	"19"	"0"	"0.0001485"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTFAEVTGLSPGVTYLFK"	"[R].nTFAEVTGLSPGVTYLFk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"801.45313"	"2402.34482"	"2402.33717"	"3.19"	"0.00255"	"12/194"	"12"	"194"	"184959.180786133"	"HCD"	"MS2"	"24.53308"	"10.2"	"100.000"	"82.9106"	"28232"	"28232"	"28208"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.2"	""	"14.3"	""	"12.5"	""	"19.4"	""	"21.4"	"14.8"	""	"1037"	"29"	"37.000"	"30.000"	"0.0609184382236146"	"17"	"0"	"0.0001573"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPNTFWMNPQYLIK"	"[R].nYPNTFWmNPQYLIk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.75555"	"2403.25211"	"2403.25715"	"-2.10"	"-0.00168"	"13/140"	"13"	"140"	"1312768.58856201"	"HCD"	"MS2"	"14.59058"	"45.0"	"100.000"	"70.2842"	"23143"	"23143"	"23114"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.9"	""	"53.2"	""	"73.1"	""	"90.5"	""	"75.4"	"69.3"	""	"1401"	"34"	"38.000"	"31.000"	"0.0295398400651722"	"15"	"0"	"3.15E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPNTFWMNPQYLIK"	"[R].nYPNTFWmNPQYLIk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.75647"	"2403.25486"	"2403.25715"	"-0.95"	"-0.00076"	"13/140"	"13"	"140"	"1205567.76507568"	"HCD"	"MS2"	"20.56183"	"44.2"	"100.000"	"70.3873"	"23133"	"23133"	"23107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.1"	""	"67.1"	""	"63.2"	""	"81.6"	"0.2"	"74.9"	"66.9"	""	"1406"	"28"	"38.000"	"31.000"	"0.100451245283331"	"15"	"0.0001308"	"0.0002669"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHIIEVGTPPTGNQPFPK"	"[K].lHIIEVGTPPTGNQPFPk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"801.79645"	"2403.37479"	"2403.38004"	"-2.18"	"-0.00175"	"14/158"	"14"	"158"	"3121533.02301025"	"HCD"	"MS2"	"0"	"64.4"	"100.000"	"53.7113"	"16394"	"16394"	"16383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.0"	""	"101.6"	""	"94.7"	""	"91.6"	"0.6"	"112.6"	"119.6"	""	"805"	"61"	"36.000"	"29.000"	"3.16057342930554E-05"	"19"	"0"	"2.225E-06"	"1.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHIIEVGTPPTGNQPFPK"	"[K].lHIIEVGTPPTGNQPFPk.[K]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"801.79791"	"2403.37918"	"2403.38004"	"-0.35"	"-0.00028"	"15/158"	"15"	"158"	"2718857.50445557"	"HCD"	"MS2"	"28.06348"	"59.6"	"100.000"	"53.5256"	"16265"	"16265"	"16252"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.5"	""	"97.6"	""	"82.7"	""	"83.5"	"2.1"	"107.7"	"104.6"	""	"784"	"52"	"35.000"	"28.000"	"0.000240041353556111"	"18"	"0"	"1.838E-06"	"1.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHIIEVGTPPTGNQPFPK"	"[K].lHIIEVGTPPTGNqPFPk.[K]"	"N-Term(TMT6plex); Q14(Deamidated); K18(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.13135"	"2404.37949"	"2404.36405"	"6.42"	"0.00515"	"8/158"	"8"	"158"	"1060294.28900146"	"HCD"	"MS2"	"45.91848"	"48.6"	"100.000"	"54.0226"	"16516"	"16516"	"16501"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.8"	""	"61.3"	""	"76.0"	""	"68.7"	"0.6"	"96.2"	"85.0"	""	"851"	"36"	"36.000"	"29.000"	"0.0102777858505632"	"15"	"0.0001308"	"0.0002978"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHIIEVGTPPTGNQPFPK"	"[K].lHIIEVGTPPTGnQPFPk.[K]"	"N-Term(TMT6plex); N13(Deamidated); K18(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"802.13135"	"2404.37949"	"2404.36405"	"6.42"	"0.00515"	"8/158"	"8"	"158"	"1060294.28900146"	"HCD"	"MS2"	"45.91848"	"48.6"	"100.000"	"54.0226"	"16516"	"16516"	"16501"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"72.8"	""	"61.3"	""	"76.0"	""	"68.7"	"0.6"	"96.2"	"85.0"	""	"851"	"36"	"36.000"	"29.000"	"0.0102777858505632"	"15"	"0.0001308"	"0.0002978"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKGYIFLEYASPAHAVDAVK"	"[K].TKGYIFLEYASPAHAVDAVk.[N]"	"K20(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"1"	"3"	"3"	"0.1774"	"0.0000"	"1"	"1"	"1"	"803.78021"	"2409.32608"	"2409.30156"	"10.18"	"0.00817"	"17/220"	"17"	"220"	"839395.048522949"	"HCD"	"MS2"	"9.349916"	"43.0"	"100.000"	"63.7365"	"20479"	"20479"	"20451"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.0"	""	"58.2"	""	"66.0"	""	"74.1"	"0.1"	"68.6"	"87.8"	""	"1181"	"62"	"37.000"	"30.000"	"3.83901582147595E-05"	"16"	"0.0001308"	"0.0002846"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVMEELLPTLQTDLLPK"	"[K].lVMEELLPTLQTDLLPk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"804.47913"	"2411.42282"	"2411.42354"	"-0.30"	"-0.00024"	"5/158"	"5"	"158"	"87779.4071655273"	"HCD"	"MS2"	"7.402845"	"2.4"	"100.000"	"98.4495"	"33737"	"33737"	"33727"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.6"	""	"2.8"	""	"4.2"	""	"4.1"	""	"3.4"	"6.0"	""	"466"	"27"	"33.000"	"26.000"	"0.0493578144512901"	"24"	"0.0001889"	"0.0004722"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIFLSQPILLELEAPLK"	"[R].eIFLSQPILLELEAPLk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P63088; P62138; P62142"	"Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.48761"	"2411.44828"	"2411.45656"	"-3.43"	"-0.00276"	"7/174"	"7"	"174"	"158637.411865234"	"HCD"	"MS2"	"28.40481"	"3.6"	"100.000"	"99.4427"	"34019"	"34019"	"34017"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.4"	""	"3.5"	""	"4.4"	""	"7.0"	""	"6.9"	"4.8"	""	"295"	"2"	"31.000"	"24.000"	"8.60581528803773"	"13"	"0.005072"	"0.1532"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIFLSQPILLELEAPLK"	"[R].eIFLSQPILLELEAPLk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P62138; P62142"	"Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"P63088; P62138; P62142"	"Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp1cb PE=1 SV=3"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"804.48798"	"2411.44937"	"2411.45656"	"-2.98"	"-0.00239"	"10/174"	"10"	"174"	"157374.008178711"	"HCD"	"MS2"	"13.38567"	"4.9"	"100.000"	"99.2578"	"33959"	"33959"	"33955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.6"	""	"6.9"	""	"8.4"	""	"9.2"	""	"9.8"	"8.9"	""	"286"	"31"	"31.000"	"24.000"	"0.0123690412384924"	"18"	"7.476E-05"	"0.0002008"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8113"	"0.0000"	"1"	"1"	"1"	"804.80115"	"2412.38889"	"2412.39027"	"-0.57"	"-0.00046"	"21/156"	"21"	"156"	"10037314.1105957"	"HCD"	"MS2"	"0"	"185.6"	"100.000"	"48.7984"	"14403"	"14403"	"14383"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"271.0"	""	"241.0"	"3.0"	"216.4"	""	"282.0"	""	"387.5"	"363.2"	""	"706"	"53"	"35.000"	"28.000"	"0.000169345907368751"	"26"	"0"	"1.037E-05"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"804.80127"	"2412.38926"	"2412.39027"	"-0.42"	"-0.00034"	"14/156"	"14"	"156"	"1687072.66674805"	"HCD"	"MS2"	"13.54399"	"71.2"	"100.000"	"48.8151"	"14363"	"14363"	"14335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.9"	""	"97.8"	""	"92.1"	""	"107.2"	""	"141.0"	"140.8"	""	"687"	"32"	"35.000"	"28.000"	"0.0210827248774107"	"16"	"0"	"8.703E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.85284"	"2412.38955"	"2412.39027"	"-0.30"	"-0.00018"	"10/156"	"10"	"156"	"26748061.0585938"	"HCD"	"MS2"	"78.92719"	"237.3"	"42.856"	"48.5692"	"14262"	"14262"	"14239"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"339.2"	""	"280.5"	""	"308.7"	""	"396.6"	"10.8"	"459.2"	"455.3"	""	"685"	"22"	"35.000"	"28.000"	"0.206376658230467"	"14"	"0"	"6.649E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"804.80139"	"2412.38962"	"2412.39027"	"-0.27"	"-0.00022"	"19/156"	"19"	"156"	"6833237.06671143"	"HCD"	"MS2"	"0"	"127.9"	"100.000"	"48.4591"	"14217"	"14217"	"14192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"193.4"	""	"160.1"	""	"141.0"	""	"204.6"	""	"252.8"	"263.7"	""	"687"	"56"	"35.000"	"28.000"	"8.82930951381105E-05"	""	"0"	"9.645E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.85309"	"2412.39052"	"2412.39027"	"0.11"	"0.00006"	"9/156"	"9"	"156"	"19839188.8712158"	"HCD"	"MS2"	"23.60342"	"142.5"	"36.343"	"48.9521"	"14466"	"14466"	"14447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"201.4"	""	"170.5"	""	"188.6"	""	"236.4"	"1.6"	"275.9"	"277.1"	""	"688"	"19"	"35.000"	"28.000"	"0.474852187023392"	"14"	"0"	"0.000103"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEPVMDSDGSFFMYSK"	"[K].nTEPVMDSDGSFFMYSk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.05298"	"2413.14438"	"2413.14560"	"-0.51"	"-0.00041"	"17/188"	"17"	"188"	"1259911.9710083"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"62.6444"	"20033"	"20033"	"20003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.9"	""	"81.3"	""	"62.8"	"2.0"	"64.4"	"2.1"	"101.4"	"87.1"	""	"801"	"44"	"36.000"	"29.000"	"0.00150522880417522"	"15"	"0"	"2.126E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEPVMDSDGSFFMYSK"	"[K].nTEPVMDSDGSFFMYSk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"805.05328"	"2413.14530"	"2413.14560"	"-0.13"	"-0.00010"	"13/188"	"13"	"188"	"1000910.05859375"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"62.5076"	"19924"	"19924"	"19897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.2"	""	"78.2"	""	"55.6"	""	"49.8"	"1.4"	"89.2"	"81.3"	""	"811"	"37"	"36.000"	"29.000"	"0.00870945257259932"	"19"	"0"	"6.763E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPASLAEPDFVMTDFAK"	"[K].sLPASLAEPDFVmTDFAk.[Y]"	"N-Term(TMT6plex); M13(Oxidation); K18(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"805.09589"	"2413.27311"	"2413.27252"	"0.24"	"0.00020"	"13/164"	"13"	"164"	"324994.980285645"	"HCD"	"MS2"	"41.41412"	"17.7"	"100.000"	"71.5698"	"23616"	"23616"	"23587"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.2"	""	"29.5"	""	"22.9"	""	"31.6"	""	"32.5"	"31.4"	""	"1389"	"37"	"38.000"	"31.000"	"0.0147459327885915"	"16"	"0.0001308"	"0.0003069"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVRPGGGFVPNFQLFEK"	"[K].yVRPGGGFVPNFQLFEk.[G]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"Q64625; P23764"	"Glutathione peroxidase 6 OS=Rattus norvegicus OX=10116 GN=Gpx6 PE=2 SV=1; Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.11896"	"2413.34232"	"2413.34326"	"-0.39"	"-0.00031"	"14/156"	"14"	"156"	"3261992.35540771"	"HCD"	"MS2"	"0"	"136.9"	"100.000"	"66.6877"	"21684"	"21684"	"21667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"249.4"	""	"246.2"	""	"226.7"	""	"193.6"	"2.2"	"180.7"	"192.3"	""	"1115"	"17"	"37.000"	"30.000"	"1.07955524490023"	"14"	"0"	"0.0001111"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVRPGGGFVPNFQLFEK"	"[K].yVRPGGGFVPNFQLFEk.[G]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"Q64625; P23764"	"Glutathione peroxidase 6 OS=Rattus norvegicus OX=10116 GN=Gpx6 PE=2 SV=1; Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"805.11963"	"2413.34433"	"2413.34326"	"0.45"	"0.00036"	"11/156"	"11"	"156"	"2676132.25823975"	"HCD"	"MS2"	"0"	"126.4"	"100.000"	"66.8407"	"21693"	"21693"	"21673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"249.8"	""	"234.1"	""	"209.4"	""	"162.8"	"0.9"	"159.2"	"174.9"	""	"1097"	"15"	"37.000"	"30.000"	"1.57100161649376"	"14"	"0"	"2.991E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSFLLNLPEEAIPVAVEK"	"[K].sSFLLNLPEEAIPVAVEk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63108"	"Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"Q63108"	"Carboxylesterase 1E OS=Rattus norvegicus OX=10116 GN=Ces1e PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.46960"	"2414.39426"	"2414.39468"	"-0.18"	"-0.00014"	"7/192"	"7"	"192"	"159595.496765137"	"HCD"	"MS2"	"43.78761"	"8.0"	"100.000"	"84.4446"	"28858"	"28858"	"28833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"8.7"	""	"12.2"	""	"10.9"	""	"17.0"	"17.9"	""	"731"	"8"	"35.000"	"28.000"	"5.70016439783251"	"13"	"0.0006037"	"0.004125"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAATIMQPYFTSNGLVTK"	"[R].dAATIMQPYFTSNGLVTk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"805.77179"	"2415.30082"	"2415.29940"	"0.58"	"0.00047"	"11/190"	"11"	"190"	"240638.356689453"	"HCD"	"MS2"	"11.22725"	"15.3"	"100.000"	"68.5229"	"22424"	"22424"	"22394"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.1"	""	"17.5"	""	"20.3"	""	"30.2"	""	"22.5"	"28.7"	""	"1441"	"19"	"38.000"	"31.000"	"0.836823726271966"	"15"	"0.0001859"	"0.0003238"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAATIMQPYFTSNGLVTK"	"[R].dAATIMQPYFTSnGLVTk.[A]"	"N-Term(TMT6plex); N13(Deamidated); K18(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.4912"	"0.0000"	"1"	"1"	"1"	"806.09869"	"2416.28153"	"2416.28342"	"-0.78"	"-0.00063"	"15/190"	"15"	"190"	"674149.382385254"	"HCD"	"MS2"	"15.6584"	"27.3"	"100.000"	"70.3548"	"23120"	"23120"	"23091"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"51.6"	""	"32.7"	""	"37.2"	""	"42.7"	"1.4"	"49.3"	"43.6"	""	"1474"	"57"	"38.000"	"31.000"	"0.000144034817890647"	"25"	"0"	"1.162E-05"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVRPGGGFEPNFTLFEK"	"[K].yVRPGGGFEPNFTLFEk.[C]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.4118"	"0.0000"	"1"	"1"	"1"	"806.10657"	"2416.30515"	"2416.30654"	"-0.57"	"-0.00046"	"6/170"	"6"	"170"	"10919330.640625"	"HCD"	"MS2"	"1.63675"	"469.1"	"97.965"	"63.1089"	"20170"	"20170"	"20153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1031.8"	""	"730.7"	""	"928.1"	""	"580.5"	""	"551.5"	"592.6"	""	"1415"	"17"	"38.000"	"31.000"	"1.39870602037914"	"23"	"0"	"4.863E-05"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVRPGGGFEPNFTLFEK"	"[K].yVRPGGGFEPNFTLFEk.[C]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.10687"	"2416.30606"	"2416.30654"	"-0.20"	"-0.00016"	"16/170"	"16"	"170"	"12552945.2601318"	"HCD"	"MS2"	"25.76589"	"371.4"	"67.837"	"63.0869"	"20213"	"20213"	"20195"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"770.9"	""	"588.0"	""	"667.9"	""	"489.2"	"2.5"	"480.3"	"499.1"	""	"1424"	"21"	"38.000"	"31.000"	"0.530249165421063"	"14"	"0"	"4.497E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLLVQDVVFTDEMAHFDR"	"[R].gPLLVQDVVFTDEMAHFDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9074"	"0.0000"	"1"	"1"	"1"	"806.74921"	"2418.23307"	"2418.23250"	"0.24"	"0.00019"	"18/192"	"18"	"192"	"832813.566772461"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"75.1936"	"25147"	"25147"	"25119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.2"	""	"14.8"	""	"13.2"	""	"19.7"	""	"20.1"	"28.4"	""	"1440"	"54"	"38.000"	"31.000"	"0.000261416199434473"	"21"	"0"	"9.167E-07"	"1.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLLVQDVVFTDEMAHFDR"	"[R].gPLLVQDVVFTDEMAHFDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"806.74957"	"2418.23417"	"2418.23250"	"0.69"	"0.00056"	"14/192"	"14"	"192"	"689598.988586426"	"HCD"	"MS2"	"11.2953"	"11.2"	"100.000"	"75.1317"	"25070"	"25070"	"25041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.9"	""	"15.1"	""	"16.8"	""	"14.1"	""	"17.7"	"24.1"	""	"1439"	"57"	"38.000"	"31.000"	"0.000153826372339686"	"23"	"0"	"1.951E-06"	"1.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSNATIINEEVLNAMLK"	"[R].sLSNATIINEEVLNAMLk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"806.79492"	"2418.37021"	"2418.36782"	"0.99"	"0.00080"	"9/184"	"9"	"184"	"114731.900756836"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"84.7746"	"28992"	"28992"	"28971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.3"	""	"8.2"	""	"10.5"	""	"13.0"	""	"6.9"	"16.5"	""	"951"	"14"	"36.000"	"29.000"	"1.74642733886839"	"15"	"0.0001889"	"0.0007882"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAKEEIFGPVQQIMK"	"[R].iAkEEIFGPVQQIMk.[F]"	"N-Term(TMT6plex); K3(TMT6plex); K15(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"1"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"806.81610"	"2418.43375"	"2418.43975"	"-2.48"	"-0.00200"	"12/138"	"12"	"138"	"769014.764343262"	"HCD"	"MS2"	"31.03831"	"50.3"	"100.000"	"65.0754"	"21026"	"21026"	"20995"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.0"	""	"84.8"	""	"86.3"	""	"56.7"	"0.4"	"64.4"	"68.9"	""	"452"	"24"	"33.000"	"26.000"	"0.0869177427422499"	"15"	"0"	"0.0001168"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAKEEIFGPVQQIMK"	"[R].iAkEEIFGPVQQIMk.[F]"	"N-Term(TMT6plex); K3(TMT6plex); K15(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.81720"	"2418.43705"	"2418.43975"	"-1.12"	"-0.00090"	"9/138"	"9"	"138"	"727668.658752441"	"HCD"	"MS2"	"43.69479"	"52.0"	"100.000"	"65.2496"	"21044"	"21044"	"21017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.3"	""	"83.2"	""	"75.0"	""	"74.5"	"1.4"	"77.5"	"78.6"	""	"405"	"11"	"33.000"	"26.000"	"1.59010216008539"	"13"	"0.0001308"	"0.0002324"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDMEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"807.08374"	"2419.23667"	"2419.23680"	"-0.06"	"-0.00005"	"7/154"	"7"	"154"	"3161996.34509277"	"HCD"	"MS2"	"0"	"114.9"	"100.000"	"55.7984"	"17241"	"17241"	"17221"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.7"	""	"138.5"	""	"149.9"	""	"131.1"	""	"235.7"	"260.5"	""	"1364"	"16"	"38.000"	"31.000"	"1.74094228841497"	"21"	"0.0001889"	"0.0007202"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDMEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"4"	"4"	"0.7778"	"0.0000"	"1"	"1"	"1"	"605.56470"	"2419.23696"	"2419.23680"	"0.06"	"0.00004"	"5/154"	"5"	"154"	"7677071.02789307"	"HCD"	"MS2"	"7.668724"	"172.3"	"100.000"	"55.3276"	"16995"	"16995"	"16971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"288.5"	""	"236.8"	""	"253.9"	""	"195.4"	"1.8"	"318.9"	"336.3"	""	"1385"	"9"	"38.000"	"31.000"	"9.25592395208411"	"15"	"0.0005564"	"0.003615"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDMEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"807.08417"	"2419.23795"	"2419.23680"	"0.47"	"0.00038"	"7/154"	"7"	"154"	"2644153.15600586"	"HCD"	"MS2"	"2.894624"	"104.7"	"100.000"	"55.6358"	"17121"	"17121"	"17099"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"159.9"	""	"134.4"	""	"124.8"	""	"129.9"	""	"212.9"	"234.0"	""	"1395"	"15"	"38.000"	"31.000"	"1.97035378250371"	"21"	"0.0001889"	"0.0008841"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDMEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"807.08417"	"2419.23795"	"2419.23680"	"0.47"	"0.00038"	"10/154"	"10"	"154"	"28420265.9603271"	"HCD"	"MS2"	"7.796034"	"449.0"	"50.396"	"55.3137"	"16989"	"16989"	"16971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"724.1"	""	"533.4"	""	"526.5"	""	"573.9"	""	"933.6"	"972.6"	""	"1395"	"15"	"38.000"	"31.000"	"2.32030038422568"	"20"	"0.0001889"	"0.0009646"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDMEk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"807.08423"	"2419.23813"	"2419.23680"	"0.55"	"0.00044"	"8/154"	"8"	"154"	"24270215.1054688"	"HCD"	"MS2"	"10.89536"	"593.7"	"74.647"	"55.4761"	"17110"	"17110"	"17093"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"907.1"	""	"712.2"	""	"719.8"	""	"790.1"	""	"1227.8"	"1292.3"	""	"1394"	"16"	"38.000"	"31.000"	"1.86738032239887"	"23"	"0.0006037"	"0.003937"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHVFEESQVAGTPMFVVK"	"[R].gHVFEESQVAGTPMFVVk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"807.43817"	"2420.29996"	"2420.30482"	"-2.01"	"-0.00162"	"15/170"	"15"	"170"	"1612262.43322754"	"HCD"	"MS2"	"48.64137"	"46.0"	"100.000"	"53.9173"	"16474"	"16474"	"16457"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.9"	""	"63.6"	""	"75.5"	""	"55.9"	"0.3"	"81.8"	"98.5"	""	"1442"	"64"	"38.000"	"31.000"	"2.92371654058285E-05"	"22"	"0"	"2.717E-07"	"1.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHVFEESQVAGTPMFVVK"	"[R].gHVFEESQVAGTPMFVVk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8933"	"0.0000"	"1"	"1"	"1"	"807.43854"	"2420.30106"	"2420.30482"	"-1.55"	"-0.00125"	"18/170"	"18"	"170"	"1362118.91094971"	"HCD"	"MS2"	"32.66446"	"42.6"	"100.000"	"53.7064"	"16336"	"16336"	"16318"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.6"	""	"68.6"	""	"71.9"	""	"44.1"	""	"79.8"	"81.4"	""	"1454"	"75"	"38.000"	"31.000"	"2.07746832503359E-06"	"25"	"0"	"2.084E-07"	"1.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHVFEESQVAGTPMFVVK"	"[R].gHVFEESqVAGTPMFVVk.[A]"	"N-Term(TMT6plex); Q8(Deamidated); K18(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.9273"	"0.0000"	"1"	"1"	"1"	"807.77271"	"2421.30356"	"2421.28884"	"6.08"	"0.00491"	"17/170"	"17"	"170"	"1599062.39282227"	"HCD"	"MS2"	"32.91958"	"46.3"	"100.000"	"53.7362"	"16348"	"16348"	"16328"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.3"	""	"62.2"	""	"73.5"	""	"49.9"	"1.0"	"91.8"	"104.3"	""	"1411"	"55"	"38.000"	"31.000"	"0.000222073643559848"	"20"	"0"	"2.317E-06"	"1.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHVFEESQVAGTPMFVVK"	"[R].gHVFEESqVAGTPMFVVk.[A]"	"N-Term(TMT6plex); Q8(Deamidated); K18(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"807.77454"	"2421.30906"	"2421.28884"	"8.35"	"0.00674"	"13/170"	"13"	"170"	"1126086.46948242"	"HCD"	"MS2"	"51.32922"	"38.3"	"100.000"	"53.8989"	"16467"	"16467"	"16446"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.9"	""	"60.9"	""	"63.6"	""	"43.0"	"1.7"	"76.6"	"74.7"	""	"1371"	"40"	"38.000"	"31.000"	"0.00736219742159923"	"20"	"0"	"3.828E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPSAMAVESFTATAPFVQIGR"	"[K].nPSAMAVESFTATAPFVQIGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"808.42242"	"2423.25272"	"2423.25905"	"-2.61"	"-0.00211"	"10/220"	"10"	"220"	"224117.197570801"	"HCD"	"MS2"	"7.212795"	"8.8"	"100.000"	"75.7943"	"25340"	"25340"	"25313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.8"	""	"13.2"	""	"9.8"	""	"16.2"	""	"16.3"	"18.1"	""	"1489"	"23"	"38.000"	"31.000"	"0.414824790079822"	"20"	"0"	"0.000162"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFHLPTTTFIGGQEPALPLR"	"[K].vFHLPTTTFIGGQEPALPLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.7534"	"0.0000"	"1"	"1"	"1"	"808.45941"	"2423.36368"	"2423.36483"	"-0.47"	"-0.00038"	"13/182"	"13"	"182"	"4508719.050354"	"HCD"	"MS2"	"2.391474"	"31.2"	"100.000"	"70.3721"	"23179"	"23179"	"23162"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.1"	""	"44.1"	""	"40.3"	""	"57.0"	"1.1"	"57.3"	"58.7"	""	"920"	"73"	"36.000"	"29.000"	"2.56896289578942E-06"	""	"0"	"7.466E-07"	"1.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFHLPTTTFIGGQEPALPLR"	"[K].vFHLPTTTFIGGQEPALPLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"808.46002"	"2423.36551"	"2423.36483"	"0.28"	"0.00023"	"17/182"	"17"	"182"	"1764638.6807251"	"HCD"	"MS2"	"9.202496"	"14.7"	"100.000"	"70.0788"	"23059"	"23059"	"23034"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.4"	""	"17.6"	""	"18.4"	""	"24.7"	""	"31.5"	"30.2"	""	"907"	"48"	"36.000"	"29.000"	"0.000773708363412917"	""	"0"	"1.539E-05"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQLPLVIEFTEQTAPK"	"[K].hNQLPLVIEFTEQTAPk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.46039"	"2423.36661"	"2423.36987"	"-1.34"	"-0.00108"	"15/168"	"15"	"168"	"1296641.6907959"	"HCD"	"MS2"	"37.11149"	"45.0"	"100.000"	"59.7470"	"18850"	"18850"	"18821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.3"	""	"55.1"	""	"63.7"	""	"73.5"	"2.4"	"76.8"	"84.5"	""	"903"	"44"	"36.000"	"29.000"	"0.00179745387504904"	"15"	"0"	"4.118E-06"	"1.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFHLPTTTFIGGQEPALPLR"	"[K].vFHLPTTTFIGGQEPALPLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"808.46039"	"2423.36661"	"2423.36483"	"0.73"	"0.00059"	"13/182"	"13"	"182"	"3848276.11645508"	"HCD"	"MS2"	"1.946692"	"28.6"	"100.000"	"70.5212"	"23188"	"23188"	"23171"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.4"	""	"38.1"	""	"38.0"	""	"52.4"	"2.8"	"49.0"	"54.3"	""	"903"	"68"	"36.000"	"29.000"	"7.57980014182335E-06"	""	"0"	"1.051E-06"	"1.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFHLPTTTFIGGQEPALPLR"	"[K].vFHLPTTTFIGGQEPALPLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.7119"	"0.0000"	"1"	"1"	"1"	"808.46051"	"2423.36698"	"2423.36483"	"0.89"	"0.00072"	"20/182"	"20"	"182"	"2006790.63476563"	"HCD"	"MS2"	"12.77322"	"17.6"	"100.000"	"70.2256"	"23067"	"23067"	"23043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.3"	""	"26.2"	""	"25.4"	""	"26.6"	""	"30.4"	"38.9"	""	"896"	"59"	"36.000"	"29.000"	"6.08524424071044E-05"	""	"0"	"8.419E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQLPLVIEFTEQTAPK"	"[K].hNQLPLVIEFTEQTAPk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.46185"	"2423.37101"	"2423.36987"	"0.47"	"0.00038"	"16/168"	"16"	"168"	"1468354.30834961"	"HCD"	"MS2"	"15.052"	"47.2"	"100.000"	"59.7194"	"18785"	"18785"	"18761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.6"	""	"52.0"	""	"60.5"	""	"86.3"	""	"100.6"	"87.8"	""	"886"	"32"	"36.000"	"29.000"	"0.0293361911139881"	"14"	"0"	"9.879E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPADTEVVCAPPTAYIDFAR"	"[K].lPADTEVVcAPPTAYIDFAR.[Q]"	"N-Term(TMT6plex); C9(Methylthio)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.74219"	"2424.21201"	"2424.21407"	"-0.85"	"-0.00069"	"17/178"	"17"	"178"	"272258.303649902"	"HCD"	"MS2"	"56.66635"	"4.7"	"100.000"	"84.4831"	"28925"	"28925"	"28897"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.8"	""	"4.8"	""	"6.1"	""	"7.8"	""	"8.8"	"11.0"	""	"1252"	"47"	"37.000"	"30.000"	"0.00136324631749308"	"15"	"0"	"1.887E-05"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPADTEVVCAPPTAYIDFAR"	"[K].lPADTEVVcAPPTAYIDFAR.[Q]"	"N-Term(TMT6plex); C9(Methylthio)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.74304"	"2424.21457"	"2424.21407"	"0.21"	"0.00017"	"10/178"	"10"	"178"	"127006.822692871"	"HCD"	"MS2"	"10.64143"	"3.2"	"100.000"	"84.7991"	"29053"	"29053"	"29026"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"5.2"	""	"5.6"	""	"4.6"	""	"4.9"	"6.1"	""	"1272"	"32"	"38.000"	"31.000"	"0.0419234597375389"	"14"	"0.0001889"	"0.0009797"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTTGIIEYPFDLQSVIFR"	"[R].vPTTGIIEYPFDLQSVIFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"808.78357"	"2424.33615"	"2424.33761"	"-0.60"	"-0.00049"	"3/178"	"3"	"178"	"145537.473937988"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"96.2266"	"33083"	"33083"	"33078"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"3.1"	""	""	""	""	""	"4.3"	"2.1"	""	"1107"	"0"	"37.000"	"30.000"	"54.8425481498147"	"13"	"0.006061"	"0.2149"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ASTLAPITSTLAAVTASAPPK"	"[M].aSTLAPITSTLAAVTASAPPk.[Y]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"Q9JJP0"	"Sodium-dependent phosphate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc20a1 PE=1 SV=1"	"Q9JJP0"	"Sodium-dependent phosphate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc20a1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"3"	"809.47174"	"2426.40067"	"2426.42705"	"-10.87"	"-0.00879"	"3/190"	"3"	"190"	"94497.7653808594"	"HCD"	"MS2"	"6.902236"	"4.8"	"100.000"	"89.0598"	"30727"	"30727"	"30721"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.4"	""	"7.0"	""	"9.2"	""	"6.3"	""	"6.2"	"11.5"	""	"757"	"2"	"35.000"	"28.000"	"22.3391108845043"	"14"	"0.007843"	"0.3147"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVMEELLPTLQTDLLPK"	"[K].lVmEELLPTLQTDLLPk.[L]"	"N-Term(TMT6plex); M3(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"809.81110"	"2427.41874"	"2427.41846"	"0.12"	"0.00009"	"11/158"	"11"	"158"	"343455.487609863"	"HCD"	"MS2"	"2.691294"	"11.0"	"100.000"	"84.8184"	"29010"	"29010"	"28987"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.5"	""	"10.5"	""	"13.7"	""	"28.7"	""	"23.6"	"16.7"	""	"618"	"31"	"34.000"	"27.000"	"0.0257607486047467"	"18"	"0"	"6.98E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVMEELLPTLQTDLLPK"	"[K].lVmEELLPTLQTDLLPk.[L]"	"N-Term(TMT6plex); M3(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"809.81128"	"2427.41928"	"2427.41846"	"0.34"	"0.00028"	"11/158"	"11"	"158"	"303132.768005371"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"84.9794"	"29126"	"29126"	"29106"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.6"	""	"9.3"	""	"11.1"	""	"26.2"	""	"20.6"	"19.6"	""	"610"	"31"	"34.000"	"27.000"	"0.0235125558064651"	"18"	"0"	"2.235E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNSYAIPFLGSDMSVVK"	"[R].eLNSYAIPFLGSDMSVVk.[R]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"810.11121"	"2428.31906"	"2428.31980"	"-0.30"	"-0.00025"	"14/194"	"14"	"194"	"776148.800720215"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"82.3333"	"27997"	"27997"	"27968"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.7"	""	"64.7"	""	"52.4"	""	"46.1"	"0.8"	"72.9"	"81.0"	""	"1261"	"34"	"37.000"	"31.000"	"0.0224225546357745"	"20"	"0"	"1.471E-05"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNSYAIPFLGSDMSVVK"	"[R].eLNSYAIPFLGSDMSVVk.[R]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"810.11182"	"2428.32090"	"2428.31980"	"0.45"	"0.00036"	"13/194"	"13"	"194"	"989433.056091309"	"HCD"	"MS2"	"18.40156"	"48.0"	"100.000"	"82.3883"	"28070"	"28070"	"28046"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.6"	""	"73.6"	""	"77.2"	""	"48.4"	"1.2"	"93.4"	"94.0"	""	"1244"	"39"	"37.000"	"30.000"	"0.00854654108457785"	"22"	"0"	"1.228E-05"	"1.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNSYAIPFLGSDMSVVK"	"[R].eLNSYAIPFLGSDMSVVk.[R]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"Q6AY30"	"Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"810.11298"	"2428.32437"	"2428.31980"	"1.88"	"0.00152"	"13/194"	"13"	"194"	"398691.43347168"	"HCD"	"MS2"	"84.87046"	"24.6"	"100.000"	"82.6242"	"28115"	"28115"	"28096"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.1"	""	"45.4"	""	"32.3"	""	"27.2"	""	"46.7"	"55.4"	""	"1210"	"30"	"37.000"	"30.000"	"0.0572473482626305"	"19"	"0.0001889"	"0.0004021"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHFPATPLLDYALEVEK"	"[K].qHFPATPLLDYALEVEk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"810.45361"	"2429.34629"	"2429.34807"	"-0.73"	"-0.00059"	"16/180"	"16"	"180"	"1538669.64959717"	"HCD"	"MS2"	"12.02257"	"46.3"	"100.000"	"70.9529"	"23416"	"23416"	"23386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.4"	""	"53.8"	""	"57.0"	""	"89.1"	""	"86.8"	"92.8"	""	"1098"	"47"	"37.000"	"30.000"	"0.00121778983447032"	"23"	"0"	"1.202E-06"	"1.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHFPATPLLDYALEVEK"	"[K].qHFPATPLLDYALEVEk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"810.45398"	"2429.34739"	"2429.34807"	"-0.28"	"-0.00023"	"15/180"	"15"	"180"	"1591513.33935547"	"HCD"	"MS2"	"12.72603"	"59.4"	"100.000"	"71.0237"	"23393"	"23393"	"23363"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.9"	""	"70.0"	""	"71.2"	""	"117.2"	""	"116.1"	"114.9"	""	"1086"	"48"	"37.000"	"30.000"	"0.00089084024684735"	"19"	"0"	"8.304E-07"	"1.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVPLPELQLPK"	"[K].vPEMAVPDVPLPELQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"810.80701"	"2430.40647"	"2430.40823"	"-0.72"	"-0.00059"	"7/162"	"7"	"162"	"771796.06829834"	"HCD"	"MS2"	"3.744421"	"14.2"	"100.000"	"86.4934"	"29736"	"29736"	"29719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.6"	""	"16.4"	""	"19.2"	""	"20.6"	""	"31.4"	"28.2"	""	"661"	"42"	"35.000"	"28.000"	"0.00198687920238223"	"17"	"0.0001308"	"0.0002739"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVPLPELQLPK"	"[K].vPEMAVPDVPLPELQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"810.80713"	"2430.40683"	"2430.40823"	"-0.57"	"-0.00046"	"13/162"	"13"	"162"	"687122.885620117"	"HCD"	"MS2"	"15.44446"	"14.2"	"100.000"	"86.1936"	"29615"	"29615"	"29596"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.3"	""	"12.4"	""	"21.1"	""	"21.5"	""	"29.9"	"32.3"	""	"654"	"33"	"35.000"	"28.000"	"0.0154009585731803"	"16"	"0.0001889"	"0.001016"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVPLPELQLPK"	"[K].vPEMAVPDVPLPELQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"810.80792"	"2430.40921"	"2430.40823"	"0.41"	"0.00033"	"14/162"	"14"	"162"	"947739.70904541"	"HCD"	"MS2"	"3.267833"	"17.6"	"100.000"	"86.3978"	"29645"	"29645"	"29629"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.0"	""	"21.1"	""	"23.6"	""	"24.2"	"0.7"	"39.3"	"37.6"	""	"622"	"43"	"34.000"	"27.000"	"0.00141175842778213"	"17"	"0"	"0.0001652"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVPLPELQLPK"	"[K].vPEMAVPDVPLPELQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"810.80853"	"2430.41104"	"2430.40823"	"1.16"	"0.00094"	"13/162"	"13"	"162"	"600926.058166504"	"HCD"	"MS2"	"5.800207"	"13.0"	"100.000"	"86.1083"	"29528"	"29528"	"29511"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.6"	""	"17.0"	""	"14.1"	""	"16.9"	""	"25.8"	"30.7"	""	"605"	"42"	"34.000"	"27.000"	"0.00192630645074644"	"17"	"0.0003571"	"0.001509"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVPLPELQLPK"	"[K].vPEMAVPDVPLPELQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.35919"	"2430.41494"	"2430.40823"	"2.76"	"0.00168"	"16/162"	"16"	"162"	"2576439.5078125"	"HCD"	"MS2"	"32.56538"	"41.2"	"100.000"	"86.3347"	"29672"	"29672"	"29654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.5"	""	"54.3"	""	"61.1"	""	"53.1"	"0.6"	"81.1"	"86.2"	""	"576"	"34"	"34.000"	"27.000"	"0.0108991464398523"	"15"	"0.0001889"	"0.0003996"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVPLPELQLPK"	"[K].vPEMAVPDVPLPELQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.36194"	"2430.42592"	"2430.40823"	"7.28"	"0.00442"	"15/162"	"15"	"162"	"1878480.01013184"	"HCD"	"MS2"	"35.97783"	"34.9"	"100.000"	"86.1511"	"29545"	"29545"	"29526"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.4"	""	"48.3"	""	"57.5"	""	"43.9"	"0.8"	"63.4"	"70.1"	""	"492"	"24"	"33.000"	"26.000"	"0.099525669357571"	"14"	"0.0001889"	"0.0007612"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KKEPELFQTVAEGLR"	"[R].kkEPELFQTVAEGLR.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"2"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.86719"	"2432.44692"	"2432.44801"	"-0.45"	"-0.00027"	"10/158"	"10"	"158"	"5784648.29815674"	"HCD"	"MS2"	"15.05065"	"174.7"	"100.000"	"46.8585"	"13610"	"13610"	"13586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"268.2"	""	"221.6"	""	"256.8"	""	"291.4"	"1.6"	"302.7"	"311.3"	""	"414"	"10"	"33.000"	"26.000"	"1.95420601391186"	"13"	"0.0003839"	"0.002101"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KKEPELFQTVAEGLR"	"[R].kkEPELFQTVAEGLR.[Q]"	"N-Term(TMT6plex); K1(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"2"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.86768"	"2432.44887"	"2432.44801"	"0.36"	"0.00022"	"6/158"	"6"	"158"	"5652567.11608887"	"HCD"	"MS2"	"18.61544"	"168.4"	"100.000"	"46.5598"	"13440"	"13440"	"13416"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"267.6"	""	"196.5"	""	"259.1"	""	"258.4"	"0.4"	"313.3"	"299.3"	""	"410"	"24"	"33.000"	"26.000"	"0.0804922117569181"	"14"	"0.0001308"	"0.0002656"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDLPEYQGEPDEISIQK"	"[K].iDLPEYqGEPDEISIqk.[C]"	"N-Term(TMT6plex); Q7(Deamidated); Q16(Deamidated); K17(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"3"	"812.07782"	"2434.21891"	"2434.26412"	"-18.58"	"-0.01507"	"4/172"	"4"	"172"	"161143.530090332"	"HCD"	"MS2"	"40.63019"	"10.9"	"100.000"	"76.6158"	"25719"	"25719"	"25707"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.3"	""	"13.1"	""	"13.8"	""	"18.8"	""	"12.1"	"29.3"	""	"1258"	"2"	"37.000"	"30.000"	"37.9883687877744"	"13"	"0.004758"	"0.1381"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDmEk.[I]"	"N-Term(TMT6plex); M14(Oxidation); K16(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.41565"	"2435.23239"	"2435.23172"	"0.28"	"0.00023"	"5/154"	"5"	"154"	"2152520.22094727"	"HCD"	"MS2"	"37.81911"	"64.3"	"100.000"	"48.1075"	"14073"	"14073"	"14050"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.1"	""	"72.4"	""	"71.1"	""	"121.0"	"0.5"	"120.9"	"124.5"	""	"1356"	"16"	"38.000"	"31.000"	"1.6301579784047"	"14"	"0.0001889"	"0.0005135"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDmEk.[I]"	"N-Term(TMT6plex); M14(Oxidation); K16(TMT6plex)"	"1"	"4"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.41608"	"2435.23368"	"2435.23172"	"0.80"	"0.00065"	"13/154"	"13"	"154"	"3022505.63781738"	"HCD"	"MS2"	"0"	"93.1"	"100.000"	"48.4260"	"14251"	"14251"	"14226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.9"	""	"101.4"	""	"110.9"	""	"169.9"	""	"188.8"	"181.1"	""	"1362"	"11"	"38.000"	"31.000"	"5.84988208145175"	"13"	"0.0001889"	"0.0003957"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLIYTILPDGEVIADSVK"	"[K].mLIYTILPDGEVIADSVk.[F]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"812.46613"	"2435.38382"	"2435.38716"	"-1.37"	"-0.00111"	"16/158"	"16"	"158"	"1027752.34381104"	"HCD"	"MS2"	"1.310493"	"24.9"	"100.000"	"86.2952"	"29656"	"29656"	"29638"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.0"	""	"50.4"	""	"39.7"	""	"27.9"	""	"24.2"	"25.7"	""	"865"	"45"	"36.000"	"29.000"	"0.00131518277360499"	"19"	"0"	"4.469E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLIYTILPDGEVIADSVK"	"[K].mLIYTILPDGEVIADSVk.[F]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9273"	"0.0000"	"1"	"1"	"1"	"812.46667"	"2435.38547"	"2435.38716"	"-0.69"	"-0.00056"	"14/158"	"14"	"158"	"857105.266418457"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"86.1442"	"29542"	"29542"	"29526"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.4"	""	"43.2"	""	"38.3"	""	"25.1"	""	"16.9"	"18.4"	""	"848"	"55"	"36.000"	"29.000"	"0.000125131271210655"	"20"	"0"	"6.719E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGAVPLIQGEYMIPCEK"	"[K].aIGAVPLIQGEYMIPcEk.[V]"	"N-Term(TMT6plex); C16(Methylthio); K18(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.77417"	"2436.30796"	"2436.31050"	"-1.04"	"-0.00085"	"5/166"	"5"	"166"	"99921.6400146484"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"83.8385"	"28611"	"28611"	"28580"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.5"	""	"6.1"	""	"3.5"	""	"6.2"	""	"7.9"	"5.5"	""	"1432"	"8"	"38.000"	"31.000"	"10.3255459169181"	"13"	"0.006533"	"0.2399"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGAVPLIQGEYMIPCEK"	"[K].aIGAVPLIQGEYMIPcEk.[V]"	"N-Term(TMT6plex); C16(Methylthio); K18(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.77472"	"2436.30960"	"2436.31050"	"-0.37"	"-0.00030"	"14/166"	"14"	"166"	"520894.852905273"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"83.5873"	"28559"	"28559"	"28539"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.5"	""	"27.8"	""	"30.2"	""	"13.8"	""	"25.4"	"22.5"	""	"1403"	"44"	"38.000"	"31.000"	"0.00306921756768513"	"15"	"0"	"1.171E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGAVPLIQGEYMIPCEK"	"[K].aIGAVPLIQGEYMIPcEk.[V]"	"N-Term(TMT6plex); C16(Methylthio); K18(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"812.77502"	"2436.31052"	"2436.31050"	"0.01"	"0.00001"	"13/166"	"13"	"166"	"380521.332275391"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"83.5138"	"28478"	"28478"	"28460"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.6"	""	"19.6"	""	"16.9"	""	"9.4"	""	"20.7"	"19.5"	""	"1394"	"47"	"38.000"	"31.000"	"0.00141981832816089"	"17"	"0"	"2.809E-05"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPNIFAIGDVVAGPMLAHK"	"[K].iPNIFAIGDVVAGPmLAHk.[A]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.13806"	"2437.39963"	"2437.40414"	"-1.85"	"-0.00150"	"8/176"	"8"	"176"	"130657.744934082"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"79.4761"	"26832"	"26832"	"26801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.2"	""	"8.6"	""	"8.4"	""	"13.8"	""	"12.2"	"12.5"	""	"793"	"17"	"35.000"	"28.000"	"0.78206561486954"	"14"	"0.0001889"	"0.0006783"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPNIFAIGDVVAGPMLAHK"	"[K].iPNIFAIGDVVAGPmLAHk.[A]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.13898"	"2437.40238"	"2437.40414"	"-0.72"	"-0.00059"	"14/176"	"14"	"176"	"273324.665283203"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"79.2629"	"26796"	"26796"	"26767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"9.6"	""	"10.3"	""	"15.7"	""	"18.4"	"18.6"	""	"770"	"38"	"35.000"	"28.000"	"0.00610183879097528"	"15"	"0"	"0.0001004"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASLSEKPPAIDWAYYR"	"[R].lASLSEkPPAIDWAYYR.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31399"	"ATP synthase subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3"	"P31399"	"ATP synthase subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"813.45325"	"2438.34519"	"2438.34840"	"-1.32"	"-0.00107"	"16/166"	"16"	"166"	"1297943.5758667"	"HCD"	"MS2"	"37.13894"	"77.3"	"100.000"	"63.1556"	"20242"	"20242"	"20211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.8"	""	"97.6"	""	"93.1"	""	"127.6"	"1.6"	"144.8"	"157.7"	""	"1225"	"40"	"37.000"	"30.000"	"0.00587632886803509"	"16"	"0"	"3.365E-06"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASLSEKPPAIDWAYYR"	"[R].lASLSEkPPAIDWAYYR.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31399"	"ATP synthase subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3"	"P31399"	"ATP synthase subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.45386"	"2438.34702"	"2438.34840"	"-0.57"	"-0.00046"	"16/166"	"16"	"166"	"1460329.29486084"	"HCD"	"MS2"	"57.61996"	"89.2"	"100.000"	"63.1362"	"20181"	"20181"	"20153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.2"	""	"105.2"	""	"120.7"	""	"143.4"	""	"174.0"	"178.1"	""	"1214"	"29"	"37.000"	"30.000"	"0.0736527032232241"	"14"	"0"	"4.575E-06"	"1.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"813.48340"	"2438.43564"	"2438.44081"	"-2.12"	"-0.00172"	"17/162"	"17"	"162"	"3035873.60455322"	"HCD"	"MS2"	"0"	"119.1"	"100.000"	"53.7592"	"16412"	"16412"	"16401"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.7"	""	"180.1"	""	"162.7"	""	"131.4"	""	"206.6"	"219.1"	""	"461"	"26"	"33.000"	"26.000"	"0.0642200929369162"	"21"	"0"	"5.554E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"4"	"4"	"0.5556"	"0.0000"	"1"	"1"	"1"	"610.36438"	"2438.43569"	"2438.44081"	"-2.10"	"-0.00128"	"14/162"	"14"	"162"	"5605041.484375"	"HCD"	"MS2"	"0"	"119.2"	"100.000"	"53.4203"	"16225"	"16225"	"16217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"218.3"	""	"189.4"	""	"183.8"	""	"135.9"	""	"184.2"	"216.2"	""	"461"	"27"	"33.000"	"26.000"	"0.0450475244556228"	"26"	"0"	"3.029E-06"	"1.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"813.48383"	"2438.43692"	"2438.44081"	"-1.59"	"-0.00130"	"16/162"	"16"	"162"	"3083398.84484863"	"HCD"	"MS2"	"11.1181"	"132.1"	"100.000"	"53.5988"	"16293"	"16293"	"16286"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"247.4"	""	"192.9"	""	"186.4"	""	"148.4"	""	"231.1"	"246.6"	""	"449"	"29"	"33.000"	"26.000"	"0.0281330193774348"	"17"	"0"	"1.625E-05"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"0.7045"	"0.0000"	"1"	"1"	"1"	"813.48395"	"2438.43729"	"2438.44081"	"-1.44"	"-0.00117"	"18/162"	"18"	"162"	"2413734.05187988"	"HCD"	"MS2"	"37.81898"	"74.4"	"100.000"	"53.2874"	"16174"	"16174"	"16164"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"155.9"	""	"112.7"	""	"105.1"	""	"82.1"	"2.0"	"117.8"	"126.8"	""	"449"	"44"	"33.000"	"26.000"	"0.000897875963213664"	""	"0"	"9.071E-06"	"1.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPMNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.48505"	"2438.44059"	"2438.44081"	"-0.09"	"-0.00008"	"18/162"	"18"	"162"	"2899767.43145752"	"HCD"	"MS2"	"0"	"92.3"	"100.000"	"53.4776"	"16304"	"16304"	"16288"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"180.6"	""	"135.4"	""	"140.8"	""	"100.7"	""	"167.4"	"147.6"	""	"417"	"36"	"33.000"	"26.000"	"0.00554761174968051"	"15"	"0"	"1.684E-06"	"1.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STASLLATQESDVMVGPFK"	"[R].sTASLLATQESDVMVGPFk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"813.77747"	"2439.31784"	"2439.32053"	"-1.10"	"-0.00090"	"15/186"	"15"	"186"	"880273.281494141"	"HCD"	"MS2"	"59.70399"	"30.5"	"100.000"	"68.3327"	"22295"	"22295"	"22266"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.0"	""	"31.9"	""	"34.9"	""	"43.3"	"1.3"	"72.4"	"70.2"	""	"1392"	"57"	"38.000"	"31.000"	"0.000144746889422417"	""	"0"	"3.57E-06"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STASLLATQESDVMVGPFK"	"[R].sTASLLATQESDVMVGPFk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"3"	"3"	"0.6275"	"0.0000"	"1"	"1"	"1"	"813.77820"	"2439.32004"	"2439.32053"	"-0.20"	"-0.00016"	"15/186"	"15"	"186"	"1000224.60198975"	"HCD"	"MS2"	"18.29717"	"29.5"	"100.000"	"68.1722"	"22281"	"22281"	"22250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.3"	""	"30.8"	""	"33.9"	""	"38.4"	""	"74.8"	"73.4"	""	"1387"	"51"	"38.000"	"31.000"	"0.000613827675417684"	""	"0"	"2.196E-06"	"1.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLEYTDTSYEDKK"	"[R].lFLEYTDTSYEDkk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"1"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"813.77936"	"2439.32352"	"2439.32622"	"-1.11"	"-0.00090"	"17/122"	"17"	"122"	"3948580.11773682"	"HCD"	"MS2"	"6.165523"	"314.5"	"100.000"	"55.5758"	"17097"	"17097"	"17067"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"452.6"	""	"357.2"	""	"363.1"	""	"524.3"	""	"650.9"	"639.5"	""	"1371"	"18"	"38.000"	"31.000"	"1.02095701877083"	"16"	"0"	"1.53E-05"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFLEYTDTSYEDKK"	"[R].lFLEYTDTSYEDkk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.77960"	"2439.32425"	"2439.32622"	"-0.81"	"-0.00066"	"14/122"	"14"	"122"	"4054213.00201416"	"HCD"	"MS2"	"2.852192"	"310.8"	"100.000"	"55.7635"	"17227"	"17227"	"17205"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"432.3"	""	"367.8"	""	"387.4"	""	"511.1"	""	"614.6"	"641.4"	""	"1355"	"30"	"38.000"	"31.000"	"0.06775"	"14"	"0"	"9.152E-06"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVYEALKDDSWLK"	"[K].eVGVYEALkDDSWLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.79523"	"2439.37113"	"2439.37384"	"-1.11"	"-0.00090"	"16/146"	"16"	"146"	"2817653.23602295"	"HCD"	"MS2"	"0"	"239.7"	"100.000"	"66.7713"	"21665"	"21665"	"21641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"480.6"	""	"285.6"	""	"310.1"	""	"380.1"	""	"416.1"	"394.0"	""	"1015"	"23"	"37.000"	"30.000"	"0.258485417061527"	"14"	"0"	"6.624E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVYEALKDDSWLK"	"[K].eVGVYEALkDDSWLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.79608"	"2439.37369"	"2439.37384"	"-0.06"	"-0.00005"	"16/146"	"16"	"146"	"4907314.22369385"	"HCD"	"MS2"	"0"	"380.2"	"100.000"	"66.6600"	"21672"	"21672"	"21651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"747.0"	""	"470.3"	""	"485.1"	""	"582.3"	""	"632.7"	"684.3"	""	"990"	"19"	"36.000"	"29.000"	"0.602012070319952"	"14"	"0"	"2.011E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVYEALKDDSWLK"	"[K].eVGVYEALkDDSWLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex); K15(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.79852"	"2439.38102"	"2439.37384"	"2.94"	"0.00239"	"15/146"	"15"	"146"	"1843169.10327148"	"HCD"	"MS2"	"0"	"158.6"	"100.000"	"67.0610"	"21783"	"21783"	"21769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"299.9"	""	"186.0"	""	"216.7"	""	"229.9"	"1.4"	"276.6"	"289.8"	""	"939"	"20"	"36.000"	"29.000"	"0.439172964012276"	"14"	"0"	"0.0001788"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPMnIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); N9(Deamidated); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"0.3030"	"0.0000"	"1"	"1"	"1"	"813.81818"	"2439.43998"	"2439.42483"	"6.21"	"0.00505"	"16/162"	"16"	"162"	"1922365.78033447"	"HCD"	"MS2"	"47.80687"	"59.4"	"100.000"	"53.4296"	"16285"	"16285"	"16272"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.4"	""	"93.2"	""	"81.3"	""	"68.4"	""	"92.7"	"104.1"	""	"433"	"33"	"33.000"	"26.000"	"0.0106772128556244"	"16"	"0"	"1.31E-05"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TATGYGFAEPYNLYSSLK"	"[K].tATGYGFAEPYNLYSSLk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"814.09613"	"2440.27384"	"2440.28005"	"-2.54"	"-0.00207"	"8/178"	"8"	"178"	"244839.19317627"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"69.3457"	"22760"	"22760"	"22730"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.3"	""	"24.2"	""	"19.9"	""	"23.1"	""	"24.6"	"29.9"	""	"1403"	"32"	"38.000"	"31.000"	"0.0450845433697889"	"22"	"0"	"2.076E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kqGGLGPMnIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); Q2(Deamidated); N9(Deamidated); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"814.15094"	"2440.43827"	"2440.40884"	"12.06"	"0.00981"	"14/162"	"14"	"162"	"751141.565429688"	"HCD"	"MS2"	"58.53148"	"33.8"	"100.000"	"53.2461"	"16159"	"16159"	"16143"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.9"	""	"52.7"	""	"47.5"	""	"38.6"	""	"69.7"	"58.8"	""	"476"	"11"	"33.000"	"26.000"	"1.70442131630671"	"16"	"0.001783"	"0.02485"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVPILPGLPMNNHGNYIVR"	"[R].iPVPILPGLPMNNHGNYIVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.13324"	"2443.38517"	"2443.38452"	"0.26"	"0.00021"	"19/170"	"19"	"170"	"822241.272888184"	"HCD"	"MS2"	"6.319667"	"21.4"	"100.000"	"71.1970"	"23463"	"23463"	"23443"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.2"	""	"31.8"	""	"32.6"	""	"29.0"	""	"39.3"	"42.2"	""	"893"	"38"	"36.000"	"29.000"	"0.0074271374839028"	"15"	"0"	"4.032E-06"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVPILPGLPMNNHGNYIVR"	"[R].iPVPILPGLPMNNHGNYIVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.13367"	"2443.38645"	"2443.38452"	"0.79"	"0.00064"	"20/170"	"20"	"170"	"963413.140258789"	"HCD"	"MS2"	"15.12428"	"24.2"	"100.000"	"71.0844"	"23469"	"23469"	"23450"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.1"	""	"35.9"	""	"33.9"	""	"34.5"	"0.6"	"42.1"	"48.6"	""	"887"	"39"	"36.000"	"29.000"	"0.00538137955181217"	"15"	"0"	"4.08E-06"	"1.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANTVLSGGTTMYPGIADR"	"[K].dLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9659"	"0.0000"	"1"	"1"	"1"	"815.41412"	"2444.22782"	"2444.23289"	"-2.08"	"-0.00169"	"18/230"	"18"	"230"	"2843517.90863037"	"HCD"	"MS2"	"14.99797"	"25.8"	"100.000"	"64.7864"	"20855"	"20855"	"20825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.0"	""	"43.8"	""	"32.2"	""	"39.7"	""	"42.6"	"48.4"	""	"1338"	"88"	"38.000"	"31.000"	"1.05057271609914E-07"	"21"	"0"	"1.054E-07"	"1.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANTVLSGGTTMYPGIADR"	"[K].dLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9610"	"0.0000"	"1"	"1"	"1"	"815.41473"	"2444.22965"	"2444.23289"	"-1.33"	"-0.00108"	"19/230"	"19"	"230"	"5531802.10968018"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"64.7806"	"20905"	"20905"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.3"	"4.0"	"37.2"	""	"44.5"	""	"32.8"	"0.4"	"47.6"	"52.6"	""	"1357"	"77"	"38.000"	"31.000"	"1.28691496754176E-06"	"20"	"0"	"2.621E-07"	"1.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANTVLSGGTTMYPGIADR"	"[K].dLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"1222.61975"	"2444.23223"	"2444.23289"	"-0.27"	"-0.00033"	"17/230"	"17"	"230"	"372649.631591797"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"64.9040"	"20903"	"20903"	"20873"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.9"	""	"28.1"	""	"21.8"	""	"14.1"	""	"28.7"	"36.0"	""	"1348"	"54"	"38.000"	"31.000"	"0.000288841702747874"	"18"	"0"	"2.128E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANTVLSGGTTMYPGIADR"	"[K].dLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"1222.62000"	"2444.23271"	"2444.23289"	"-0.07"	"-0.00009"	"7/230"	"7"	"230"	"325250.528747559"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"64.8704"	"20942"	"20942"	"20915"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.6"	""	"16.9"	""	"20.2"	""	"13.9"	""	"22.4"	"26.5"	""	"1354"	"45"	"38.000"	"31.000"	"0.00202576315898374"	"23"	"0"	"3.687E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANTVLSGGTTMYPGIADR"	"[K].dLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.41638"	"2444.23459"	"2444.23289"	"0.70"	"0.00057"	"22/230"	"22"	"230"	"1351227.65008545"	"HCD"	"MS2"	"2.441434"	"14.3"	"100.000"	"65.1136"	"20988"	"20988"	"20969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.3"	""	"18.6"	""	"20.9"	""	"18.2"	""	"29.5"	"28.0"	""	"1377"	"75"	"38.000"	"31.000"	"2.12277490374668E-06"	"18"	"0"	"3.504E-07"	"1.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANTVLSGGTTMYPGIADR"	"[K].dLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.41650"	"2444.23496"	"2444.23289"	"0.85"	"0.00069"	"20/230"	"20"	"230"	"791462.918151855"	"HCD"	"MS2"	"5.92523"	"13.6"	"100.000"	"65.1055"	"21038"	"21038"	"21011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.3"	""	"19.1"	""	"18.0"	""	"21.3"	""	"31.4"	"22.3"	""	"1374"	"78"	"38.000"	"31.000"	"1.18292371101539E-06"	"17"	"0"	"1.773E-06"	"1.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLPVLDSDESYFLYSK"	"[K].nTLPVLDSDESYFLYSk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"817.10046"	"2449.28684"	"2449.29028"	"-1.40"	"-0.00115"	"16/188"	"16"	"188"	"872263.911804199"	"HCD"	"MS2"	"18.68993"	"31.6"	"100.000"	"74.8802"	"24967"	"24967"	"24945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.7"	""	"33.1"	""	"35.8"	""	"54.7"	"2.1"	"66.1"	"68.3"	""	"1475"	"53"	"38.000"	"31.000"	"0.000337879641451968"	"18"	"0"	"1.404E-06"	"1.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLPVLDSDESYFLYSK"	"[K].nTLPVLDSDESYFLYSk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"817.10065"	"2449.28739"	"2449.29028"	"-1.18"	"-0.00096"	"15/188"	"15"	"188"	"939268.340087891"	"HCD"	"MS2"	"49.52142"	"33.5"	"100.000"	"74.9467"	"25046"	"25046"	"25023"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.4"	""	"36.0"	""	"37.2"	""	"50.1"	""	"72.1"	"74.9"	""	"1478"	"48"	"38.000"	"31.000"	"0.00130510194948708"	"19"	"0"	"7.797E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGPPVQQIILVSPMGVSK"	"[K].qLGPPVQQIILVSPMGVSk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"817.15851"	"2449.46097"	"2449.46166"	"-0.28"	"-0.00023"	"17/190"	"17"	"190"	"1094796.61480713"	"HCD"	"MS2"	"77.3202"	"42.5"	"100.000"	"75.5350"	"25286"	"25286"	"25263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.3"	""	"60.3"	""	"55.9"	""	"56.8"	"1.1"	"81.5"	"82.5"	""	"422"	"57"	"33.000"	"26.000"	"4.25875302736809E-05"	"16"	"0"	"9.644E-07"	"1.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLGPPVQQIILVSPMGVSK"	"[K].qLGPPVQQIILVSPMGVSk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"817.15924"	"2449.46317"	"2449.46166"	"0.62"	"0.00050"	"15/190"	"15"	"190"	"884439.454956055"	"HCD"	"MS2"	"81.42364"	"35.7"	"100.000"	"75.5934"	"25258"	"25258"	"25233"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.2"	""	"53.9"	""	"49.1"	""	"50.4"	""	"64.5"	"66.8"	""	"402"	"55"	"33.000"	"26.000"	"6.60991778060726E-05"	"16"	"0"	"7.759E-06"	"1.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLIYTILPDGEVIADSVK"	"[K].mLIYTILPDGEVIADSVk.[F]"	"N-Term(TMT6plex); M1(Oxidation); K18(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"817.79822"	"2451.38010"	"2451.38207"	"-0.80"	"-0.00066"	"14/158"	"14"	"158"	"482994.491638184"	"HCD"	"MS2"	"3.163226"	"15.8"	"100.000"	"78.1094"	"26325"	"26325"	"26303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.1"	""	"24.0"	""	"21.6"	""	"34.1"	""	"22.9"	"24.2"	""	"941"	"41"	"36.000"	"29.000"	"0.00352013749990499"	"23"	"0"	"2.075E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLIYTILPDGEVIADSVK"	"[K].mLIYTILPDGEVIADSVk.[F]"	"N-Term(TMT6plex); M1(Oxidation); K18(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"817.79871"	"2451.38156"	"2451.38207"	"-0.21"	"-0.00017"	"13/158"	"13"	"158"	"728851.789916992"	"HCD"	"MS2"	"33.75595"	"19.8"	"100.000"	"78.0782"	"26261"	"26261"	"26241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.6"	""	"31.0"	""	"26.4"	""	"38.4"	""	"29.8"	"23.6"	""	"923"	"51"	"36.000"	"29.000"	"0.000341327834439377"	"28"	"0"	"1.167E-05"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVNLPGAAVDLPAVSEK"	"[K].kGVNLPGAAVDLPAVSEk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.16187"	"2452.47104"	"2452.47422"	"-1.30"	"-0.00106"	"20/182"	"20"	"182"	"3638552.65887451"	"HCD"	"MS2"	"4.54267"	"111.7"	"100.000"	"51.8797"	"15606"	"15606"	"15586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"182.9"	""	"145.6"	""	"138.9"	""	"174.6"	""	"201.2"	"216.0"	""	"309"	"38"	"31.000"	"24.000"	"0.00224351244917306"	"15"	"0"	"1.495E-06"	"1.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVNLPGAAVDLPAVSEK"	"[K].kGVNLPGAAVDLPAVSEk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.87360"	"2452.47255"	"2452.47422"	"-0.68"	"-0.00042"	"17/182"	"17"	"182"	"9594388.69433594"	"HCD"	"MS2"	"12.15143"	"199.9"	"100.000"	"51.9627"	"15690"	"15690"	"15670"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.0"	""	"249.1"	""	"267.2"	""	"326.7"	"1.1"	"371.8"	"383.2"	""	"295"	"27"	"31.000"	"24.000"	"0.0267788560259037"	"14"	"0"	"7.675E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVNLPGAAVDLPAVSEK"	"[K].kGVNLPGAAVDLPAVSEk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.16284"	"2452.47397"	"2452.47422"	"-0.10"	"-0.00008"	"15/182"	"15"	"182"	"3780984.19787598"	"HCD"	"MS2"	"12.28372"	"120.0"	"100.000"	"51.8242"	"15634"	"15634"	"15606"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"187.5"	""	"172.2"	""	"162.3"	""	"168.9"	"2.3"	"206.6"	"236.2"	""	"291"	"41"	"31.000"	"24.000"	"0.00121021628695439"	"15"	"0"	"8.07E-07"	"1.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVNLPGAAVDLPAVSEK"	"[K].kGVNLPGAAVDLPAVSEk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.87415"	"2452.47475"	"2452.47422"	"0.22"	"0.00013"	"17/182"	"17"	"182"	"9466094.93707275"	"HCD"	"MS2"	"21.39618"	"197.7"	"100.000"	"51.7738"	"15563"	"15563"	"15538"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"294.7"	""	"258.9"	""	"268.2"	""	"314.0"	""	"361.7"	"379.1"	""	"291"	"28"	"31.000"	"24.000"	"0.0219211328130171"	"14"	"0"	"1.352E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGVNLPGAAVDLPAVSEK"	"[K].kGVNLPGAAVDLPAVSEk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.16321"	"2452.47507"	"2452.47422"	"0.35"	"0.00028"	"15/182"	"15"	"182"	"2027673.05609131"	"HCD"	"MS2"	"4.362357"	"68.4"	"100.000"	"52.1258"	"15757"	"15757"	"15734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.4"	""	"90.3"	""	"96.1"	""	"91.3"	""	"132.5"	"138.3"	""	"291"	"34"	"31.000"	"24.000"	"0.00555728914072268"	"15"	"0"	"8.153E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITKLATDVTK"	"[R].fPNAEFAEITKLATDVTk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.1765"	"0.0000"	"1"	"1"	"1"	"818.46307"	"2453.37467"	"2453.36920"	"2.23"	"0.00182"	"10/190"	"10"	"190"	"399050.889587402"	"HCD"	"MS2"	"14.51349"	"19.6"	"100.000"	"80.2516"	"27148"	"27148"	"27121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.0"	""	"22.3"	""	"28.1"	""	"35.3"	""	"43.4"	"40.2"	""	"951"	"17"	"36.000"	"29.000"	"0.964163133132369"	"15"	"0.001966"	"0.02936"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITKLATDVTK"	"[R].fPNAEFAEITKLATDVTk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.4906"	"0.0000"	"1"	"1"	"1"	"818.46356"	"2453.37613"	"2453.36920"	"2.83"	"0.00231"	"16/190"	"16"	"190"	"778459.796386719"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"80.7218"	"27391"	"27391"	"27374"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.9"	""	"34.5"	""	"41.6"	""	"43.7"	""	"76.5"	"80.5"	""	"934"	"53"	"36.000"	"29.000"	"0.000210531401020862"	"25"	"0"	"7.928E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITKLATDVTK"	"[R].fPNAEFAEITKLATDVTk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"818.46405"	"2453.37760"	"2453.36920"	"3.42"	"0.00280"	"11/190"	"11"	"190"	"725261.430297852"	"HCD"	"MS2"	"7.850524"	"33.5"	"100.000"	"80.3020"	"27219"	"27219"	"27199"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"38.8"	""	"34.2"	""	"41.0"	""	"55.1"	""	"77.3"	"74.7"	""	"925"	"16"	"36.000"	"29.000"	"1.24770448750578"	"16"	"0.008495"	"0.3599"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITKLATDVTK"	"[R].fPNAEFAEITKLATDVTk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"818.46429"	"2453.37833"	"2453.36920"	"3.72"	"0.00304"	"16/190"	"16"	"190"	"881853.49798584"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"80.7014"	"27331"	"27331"	"27312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.0"	""	"46.9"	""	"42.2"	""	"62.1"	""	"90.0"	"93.5"	""	"901"	"48"	"36.000"	"29.000"	"0.000790123166079713"	"25"	"0"	"0.0001421"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTEAEALASSLMGLFEK"	"[K].vPSTEAEALASSLmGLFEk.[R]"	"N-Term(TMT6plex); M14(Oxidation); K19(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.77783"	"2454.31894"	"2454.32020"	"-0.51"	"-0.00042"	"11/174"	"11"	"174"	"70227.7927856445"	"HCD"	"MS2"	"3.837176"	"2.2"	"100.000"	"95.8733"	"32981"	"32981"	"32977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.6"	""	"2.3"	""	"2.5"	""	"6.8"	""	"3.7"	"2.5"	""	"1332"	"13"	"38.000"	"31.000"	"3.20977233218334"	"13"	"0.0001889"	"0.0006772"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTEAEALASSLMGLFEK"	"[K].vPSTEAEALASSLmGLFEk.[R]"	"N-Term(TMT6plex); M14(Oxidation); K19(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.77808"	"2454.31968"	"2454.32020"	"-0.21"	"-0.00017"	"15/174"	"15"	"174"	"151024.102600098"	"HCD"	"MS2"	"5.723598"	"2.0"	"100.000"	"95.2573"	"32810"	"32810"	"32806"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.7"	""	""	""	""	""	"7.9"	""	"3.7"	"3.4"	""	"1331"	"21"	"38.000"	"31.000"	"0.552265685780849"	"14"	"0.0001308"	"0.0002431"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPmNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); M8(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.36340"	"2454.43178"	"2454.43573"	"-1.61"	"-0.00099"	"14/162"	"14"	"162"	"5444281.64715576"	"HCD"	"MS2"	"13.69951"	"110.2"	"100.000"	"45.2781"	"12969"	"12969"	"12939"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"175.0"	""	"155.9"	""	"184.0"	""	"198.3"	""	"172.2"	"156.6"	""	"524"	"23"	"34.000"	"27.000"	"0.120587222278315"	"14"	"0"	"9.688E-06"	"1.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPmNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); M8(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.81653"	"2454.43503"	"2454.43573"	"-0.28"	"-0.00023"	"17/162"	"17"	"162"	"3128228.54925537"	"HCD"	"MS2"	"0"	"85.0"	"100.000"	"45.3150"	"12984"	"12984"	"12955"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"129.0"	""	"126.1"	""	"148.6"	""	"169.8"	""	"126.9"	"105.2"	""	"515"	"24"	"34.000"	"27.000"	"0.0932775720922999"	"14"	"0"	"3.392E-05"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPmNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); M8(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"818.81659"	"2454.43521"	"2454.43573"	"-0.21"	"-0.00017"	"15/162"	"15"	"162"	"1417791.16247559"	"HCD"	"MS2"	"39.68971"	"50.4"	"100.000"	"44.5317"	"12615"	"12615"	"12590"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.0"	""	"69.1"	""	"85.8"	""	"95.9"	""	"80.9"	"74.7"	""	"514"	"27"	"34.000"	"27.000"	"0.050342308109104"	"15"	"0"	"7.787E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPmNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); M8(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.36438"	"2454.43569"	"2454.43573"	"-0.02"	"-0.00001"	"16/162"	"16"	"162"	"5171793.60644531"	"HCD"	"MS2"	"7.171538"	"110.9"	"100.000"	"45.0141"	"12812"	"12812"	"12784"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.7"	""	"168.0"	""	"190.8"	""	"191.3"	"0.9"	"158.0"	"155.9"	""	"508"	"30"	"34.000"	"27.000"	"0.0278505461820369"	"14"	"0"	"3.509E-06"	"1.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPmNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); M8(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"818.81677"	"2454.43576"	"2454.43573"	"0.02"	"0.00001"	"15/162"	"15"	"162"	"1782531.88269043"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"44.8990"	"12765"	"12765"	"12736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.8"	""	"79.1"	""	"96.4"	""	"119.0"	"0.3"	"83.7"	"86.9"	""	"510"	"23"	"34.000"	"27.000"	"0.142409899657892"	"15"	"0"	"0.0001164"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGGLGPMNIPLVSDPK"	"[K].kQGGLGPmNIPLVSDPk.[R]"	"N-Term(TMT6plex); K1(TMT6plex); M8(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"1"	"3"	"3"	"0.6571"	"0.0000"	"1"	"1"	"1"	"818.81696"	"2454.43631"	"2454.43573"	"0.24"	"0.00020"	"17/162"	"17"	"162"	"2679351.34094238"	"HCD"	"MS2"	"5.689007"	"78.7"	"100.000"	"44.9148"	"12820"	"12820"	"12799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.5"	""	"109.5"	""	"123.1"	""	"153.9"	""	"131.6"	"110.8"	""	"505"	"35"	"34.000"	"27.000"	"0.00877528807644094"	"27"	"0"	"8.792E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVQPTVSLGGFEITPPVVLR"	"[K].mSVQPTVSLGGFEITPPVVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.46295"	"2456.37430"	"2456.37843"	"-1.68"	"-0.00138"	"18/220"	"18"	"220"	"319296.374633789"	"HCD"	"MS2"	"5.081828"	"6.9"	"100.000"	"84.5022"	"28881"	"28881"	"28860"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.0"	""	"4.7"	""	"11.5"	""	"7.4"	""	"15.5"	"17.2"	""	"1017"	"50"	"37.000"	"30.000"	"0.000486733185253429"	"16"	"0"	"3.694E-05"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVQPTVSLGGFEITPPVVLR"	"[K].mSVQPTVSLGGFEITPPVVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.46411"	"2456.37778"	"2456.37843"	"-0.27"	"-0.00022"	"14/220"	"14"	"220"	"298823.837341309"	"HCD"	"MS2"	"8.178912"	"6.0"	"100.000"	"84.5822"	"28965"	"28965"	"28945"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.6"	""	"3.2"	""	"6.4"	""	"11.1"	""	"12.0"	"19.1"	""	"988"	"28"	"36.000"	"29.000"	"0.0732363934062101"	"14"	"0.0001308"	"0.0002681"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVHLPDIQLPK"	"[K].vPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"0.9821"	"0.0000"	"1"	"1"	"1"	"614.85443"	"2456.39589"	"2456.39872"	"-1.15"	"-0.00071"	"10/162"	"10"	"162"	"3483852.75537109"	"HCD"	"MS2"	"7.630414"	"56.9"	"100.000"	"75.0942"	"25106"	"25106"	"25087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.6"	""	"79.1"	""	"82.8"	""	"67.9"	""	"120.5"	"116.8"	""	"830"	"56"	"36.000"	"29.000"	"0.00011589056941135"	"17"	"0"	"1.542E-06"	"1.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVHLPDIQLPK"	"[K].vPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.85449"	"2456.39614"	"2456.39872"	"-1.05"	"-0.00065"	"6/162"	"6"	"162"	"1147953.14147949"	"HCD"	"MS2"	"19.69296"	"25.6"	"100.000"	"75.3973"	"25178"	"25178"	"25153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.8"	""	"34.0"	""	"43.0"	""	"38.7"	""	"45.7"	"50.3"	""	"829"	"25"	"36.000"	"29.000"	"0.128388029952527"	"14"	"0.0001889"	"0.000608"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVHLPDIQLPK"	"[K].vPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.47076"	"2456.39774"	"2456.39872"	"-0.40"	"-0.00033"	"11/162"	"11"	"162"	"817861.771606445"	"HCD"	"MS2"	"3.58532"	"34.8"	"100.000"	"75.3391"	"25206"	"25206"	"25183"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"48.3"	""	"45.3"	""	"50.2"	""	"53.1"	""	"67.7"	"67.8"	""	"820"	"26"	"36.000"	"29.000"	"0.0945766347375229"	"14"	"0.0001889"	"0.0003896"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVHLPDIQLPK"	"[K].vPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.85492"	"2456.39785"	"2456.39872"	"-0.36"	"-0.00022"	"8/162"	"8"	"162"	"3121892.2255249"	"HCD"	"MS2"	"3.996335"	"59.1"	"100.000"	"75.0810"	"25049"	"25049"	"25025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"78.2"	""	"83.9"	""	"76.3"	""	"86.3"	""	"115.2"	"125.2"	""	"819"	"32"	"36.000"	"29.000"	"0.0249605359419849"	"15"	"0"	"4.723E-06"	"1.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVHLPDIQLPK"	"[K].vPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"819.47113"	"2456.39884"	"2456.39872"	"0.05"	"0.00004"	"12/162"	"12"	"162"	"1746598.1998291"	"HCD"	"MS2"	"39.52934"	"44.6"	"100.000"	"75.0134"	"25073"	"25073"	"25055"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.6"	""	"43.7"	""	"49.6"	""	"53.9"	""	"114.6"	"117.7"	""	"816"	"39"	"36.000"	"29.000"	"0.00459896562119609"	"16"	"0"	"5.823E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVHLPDIQLPK"	"[K].vPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"819.47125"	"2456.39920"	"2456.39872"	"0.20"	"0.00016"	"11/162"	"11"	"162"	"678084.746398926"	"HCD"	"MS2"	"12.64489"	"34.6"	"100.000"	"75.3881"	"25174"	"25174"	"25153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.0"	""	"49.5"	""	"46.6"	""	"62.3"	""	"64.7"	"62.6"	""	"809"	"31"	"36.000"	"29.000"	"0.0306138906035984"	"16"	"0.0001308"	"0.0002261"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVHLPDIQLPK"	"[K].vPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.47192"	"2456.40122"	"2456.39872"	"1.02"	"0.00083"	"13/162"	"13"	"162"	"1452726.97796631"	"HCD"	"MS2"	"39.27593"	"40.5"	"100.000"	"75.0001"	"25016"	"25016"	"24993"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.2"	""	"36.2"	""	"44.4"	""	"47.4"	""	"105.2"	"115.4"	""	"812"	"29"	"36.000"	"29.000"	"0.0551475259314385"	"14"	"0.0001859"	"0.0003674"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANNVLSGGTTMYPGIADR"	"[K].dLYANNVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex)"	"1"	"3"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"819.74750"	"2457.22794"	"2457.22814"	"-0.08"	"-0.00007"	"18/230"	"18"	"230"	"848078.042175293"	"HCD"	"MS2"	"15.65439"	"31.4"	"100.000"	"62.9087"	"20088"	"20088"	"20057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.2"	""	"43.9"	""	"38.9"	""	"53.1"	""	"56.0"	"58.0"	""	"1249"	"43"	"37.000"	"30.000"	"0.00315887501420945"	"19"	"0"	"9.743E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQTVPFYIFSESYGGK"	"[K].eFQTVPFYIFSESYGGk.[M]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.76282"	"2457.27390"	"2457.27423"	"-0.14"	"-0.00011"	"7/180"	"7"	"180"	"266066.348144531"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"83.7160"	"28612"	"28612"	"28587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.4"	""	"15.6"	""	"21.6"	""	"17.5"	""	"25.0"	"23.0"	""	"1485"	"7"	"38.000"	"31.000"	"13.3258971792315"	"13"	"0.0004557"	"0.002537"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNIGYHYSLMPEFSSLR"	"[R].sLDNIGYHYSLMPEFSSLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"820.07977"	"2458.22477"	"2458.22741"	"-1.08"	"-0.00088"	"18/206"	"18"	"206"	"1244387.62561035"	"HCD"	"MS2"	"7.489961"	"26.3"	"100.000"	"66.2476"	"21451"	"21451"	"21433"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.3"	""	"25.8"	""	"24.8"	""	"47.2"	"1.3"	"63.2"	"61.5"	""	"1219"	"49"	"37.000"	"30.000"	"0.0008432837079833"	"17"	"0"	"2.914E-06"	"1.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNIGYHYSLMPEFSSLR"	"[R].sLDNIGYHYSLMPEFSSLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"820.08136"	"2458.22953"	"2458.22741"	"0.86"	"0.00070"	"17/206"	"17"	"206"	"1337701.71289063"	"HCD"	"MS2"	"5.489244"	"23.6"	"100.000"	"66.1873"	"21479"	"21479"	"21459"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.9"	""	"22.5"	""	"17.6"	""	"42.6"	""	"63.7"	"57.2"	""	"1243"	"45"	"37.000"	"30.000"	"0.00176783257827888"	"17"	"0"	"6.319E-06"	"1.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMYSHLVDYFPEYDGPQR"	"[K].iMYSHLVDYFPEYDGPQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"820.40051"	"2459.18698"	"2459.19030"	"-1.35"	"-0.00110"	"7/158"	"7"	"158"	"566811.666320801"	"HCD"	"MS2"	"31.31994"	"14.6"	"100.000"	"64.6422"	"20849"	"20849"	"20819"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.3"	""	"16.3"	""	"17.6"	""	"24.8"	""	"32.4"	"28.4"	""	"956"	"19"	"36.000"	"29.000"	"0.568104064714895"	"22"	"0.0001889"	"0.0004951"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMYSHLVDYFPEYDGPQR"	"[K].iMYSHLVDYFPEYDGPQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"820.40265"	"2459.19339"	"2459.19030"	"1.26"	"0.00103"	"8/158"	"8"	"158"	"645575.691467285"	"HCD"	"MS2"	"26.09177"	"16.8"	"100.000"	"64.6618"	"20804"	"20804"	"20777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.8"	""	"21.5"	""	"25.9"	""	"28.7"	""	"32.6"	"28.3"	""	"990"	"25"	"36.000"	"29.000"	"0.147776439636439"	"15"	"0"	"0.00013"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVPILPGLPMNNHGNYIVR"	"[R].iPVPILPGLPmNNHGNYIVR.[L]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"820.46332"	"2459.37540"	"2459.37944"	"-1.64"	"-0.00135"	"12/170"	"12"	"170"	"774976.182006836"	"HCD"	"MS2"	"0"	"21.1"	"100.000"	"65.6070"	"21190"	"21190"	"21161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.6"	""	"26.0"	""	"21.9"	""	"40.7"	""	"42.2"	"45.5"	""	"1019"	"1"	"37.000"	"30.000"	"40.7515552926081"	"13"	"0.0008125"	"0.007461"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANTVLSGGTTMYPGIADR"	"[K].dLYANTVLSGGTTmYPGIADR.[M]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8554"	"0.0000"	"1"	"1"	"1"	"820.74731"	"2460.22739"	"2460.22781"	"-0.17"	"-0.00014"	"20/230"	"20"	"230"	"2010547.66320801"	"HCD"	"MS2"	"46.42889"	"29.7"	"100.000"	"58.3695"	"18238"	"18238"	"18218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.1"	""	"34.6"	""	"30.9"	""	"51.5"	"0.7"	"62.2"	"59.9"	""	"1269"	"83"	"38.000"	"31.000"	"3.47081628456225E-07"	"30"	"0"	"1.83E-07"	"1.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANTVLSGGTTMYPGIADR"	"[K].dLYANTVLSGGTTmYPGIADR.[M]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8406"	"0.0000"	"1"	"1"	"1"	"820.74762"	"2460.22831"	"2460.22781"	"0.20"	"0.00017"	"18/230"	"18"	"230"	"2170785.93719482"	"HCD"	"MS2"	"0"	"43.4"	"100.000"	"58.5749"	"18376"	"18376"	"18357"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.8"	""	"51.9"	""	"56.7"	""	"77.5"	""	"85.1"	"81.5"	""	"1271"	"69"	"38.000"	"31.000"	"7.80037631401167E-06"	"28"	"0"	"7.357E-07"	"1.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANTVLSGGTTMYPGIADR"	"[K].dLYAnTVLSGGTTmYPGIADR.[M]"	"N-Term(TMT6plex); N5(Deamidated); M14(Oxidation)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"821.09021"	"2461.25608"	"2461.21182"	"17.98"	"0.01475"	"13/230"	"13"	"230"	"4429845.55389404"	"HCD"	"MS2"	"28.18941"	"31.6"	"100.000"	"64.7783"	"20904"	"20904"	"20883"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.0"	""	"33.1"	""	"42.3"	""	"46.2"	""	"68.7"	"62.6"	""	"1430"	"18"	"38.000"	"31.000"	"1.13581092524741"	"16"	"0.000523"	"0.003203"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDPELWGSVLLESNPYR"	"[R].kDPELWGSVLLESNPYR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"821.12048"	"2461.34690"	"2461.34913"	"-0.91"	"-0.00074"	"9/182"	"9"	"182"	"1441325.79284668"	"HCD"	"MS2"	"11.29948"	"46.8"	"100.000"	"66.4186"	"21521"	"21521"	"21497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.2"	""	"51.0"	""	"47.3"	""	"92.6"	""	"106.5"	"95.4"	""	"1197"	"38"	"37.000"	"30.000"	"0.0103291397835614"	"15"	"0"	"8.951E-06"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDPELWGSVLLESNPYR"	"[R].kDPELWGSVLLESNPYR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"1"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"821.12122"	"2461.34909"	"2461.34913"	"-0.01"	"-0.00001"	"10/182"	"10"	"182"	"1747233.4664917"	"HCD"	"MS2"	"1.934929"	"55.0"	"100.000"	"66.3486"	"21545"	"21545"	"21523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.3"	""	"45.6"	""	"50.7"	""	"105.7"	""	"130.7"	"130.3"	""	"1190"	"38"	"37.000"	"30.000"	"0.00956130045542662"	"16"	"0"	"2.984E-06"	"1.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGSASAMLQPLLDNQVGFK"	"[K].aGGSASAMLQPLLDNQVGFk.[N]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"3"	"3"	"0.7755"	"0.0000"	"1"	"1"	"1"	"821.45581"	"2462.35288"	"2462.34775"	"2.08"	"0.00171"	"16/192"	"16"	"192"	"541890.655639648"	"HCD"	"MS2"	"5.378157"	"23.7"	"100.000"	"73.8562"	"24549"	"24549"	"24529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.2"	""	"32.1"	""	"37.9"	""	"30.5"	""	"47.7"	"41.4"	""	"1207"	"49"	"37.000"	"30.000"	"0.000747613739971078"	"27"	"0"	"8.663E-06"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAIMGNPKVK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"821.74646"	"2463.22483"	"2463.24273"	"-7.27"	"-0.00597"	"13/186"	"13"	"186"	"427478.589477539"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"75.8074"	"25397"	"25397"	"25375"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.9"	""	"28.5"	""	"25.5"	""	"24.7"	"1.3"	"31.9"	"32.1"	""	"1269"	"19"	"38.000"	"31.000"	"0.75584305409337"	"18"	"0.0005564"	"0.00351"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAIMGNPKVK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"0.9273"	"0.0000"	"1"	"1"	"1"	"821.74780"	"2463.22885"	"2463.24273"	"-5.63"	"-0.00462"	"13/186"	"13"	"186"	"460145.397277832"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"75.7528"	"25323"	"25323"	"25297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.4"	""	"18.2"	""	"24.9"	""	"24.6"	""	"34.6"	"39.7"	""	"1300"	"55"	"38.000"	"31.000"	"0.000199486429245425"	"20"	"0"	"0.000163"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAIMGNPKVK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"821.75092"	"2463.23819"	"2463.24273"	"-1.84"	"-0.00151"	"15/186"	"15"	"186"	"472064.416870117"	"HCD"	"MS2"	"55.79464"	"18.3"	"100.000"	"64.3310"	"20722"	"20722"	"20691"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.5"	""	"20.8"	""	"25.6"	""	"31.8"	""	"39.0"	"32.3"	""	"1354"	"55"	"38.000"	"31.000"	"0.000197509808847879"	"19"	"0"	"2.675E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAIMGnPKVK.[A]"	"N-Term(TMT6plex); N17(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"822.07990"	"2464.22513"	"2464.22674"	"-0.65"	"-0.00054"	"10/186"	"10"	"186"	"714114.454589844"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"75.8535"	"25416"	"25416"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.9"	""	"17.1"	""	"28.0"	""	"34.7"	""	"49.8"	"49.6"	""	"1294"	"37"	"38.000"	"31.000"	"0.0144512122817136"	"19"	"0.0001889"	"0.0005217"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYLQETGKPLDETLK"	"[K].aAYLQETGkPLDETLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.14667"	"2464.42545"	"2464.42660"	"-0.47"	"-0.00038"	"12/158"	"12"	"158"	"882497.137390137"	"HCD"	"MS2"	"45.91822"	"80.0"	"100.000"	"47.1864"	"13696"	"13696"	"13672"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.5"	""	"97.6"	""	"86.8"	""	"139.2"	"1.5"	"174.5"	"167.2"	""	"640"	"13"	"35.000"	"28.000"	"1.5351470356374"	"13"	"0"	"0.0001006"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYLQETGKPLDETLK"	"[K].aAYLQETGkPLDETLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.14746"	"2464.42783"	"2464.42660"	"0.50"	"0.00041"	"12/158"	"12"	"158"	"2543449.74847412"	"HCD"	"MS2"	"0"	"198.5"	"100.000"	"47.3600"	"13815"	"13815"	"13794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"244.9"	""	"196.1"	""	"219.6"	""	"353.5"	""	"453.9"	"424.0"	""	"634"	"36"	"35.000"	"28.000"	"0.00772786029422895"	"15"	"0"	"4.557E-06"	"1.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"822.41663"	"2465.23532"	"2465.24228"	"-2.82"	"-0.00232"	"9/166"	"9"	"166"	"96955.6738891602"	"HCD"	"MS2"	"50.63924"	"3.2"	"100.000"	"87.3841"	"30097"	"30097"	"30075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.1"	""	"2.9"	""	"3.5"	""	"4.5"	""	"5.1"	"8.2"	""	"1309"	"21"	"38.000"	"31.000"	"0.557069846003456"	"14"	"0.0002277"	"0.001337"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"822.41699"	"2465.23642"	"2465.24228"	"-2.38"	"-0.00195"	"6/166"	"6"	"166"	"75154.5298461914"	"HCD"	"MS2"	"0"	"2.4"	"100.000"	"94.0685"	"32440"	"32440"	"32427"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	"2.9"	""	"1.7"	""	"4.5"	""	"7.0"	"4.0"	""	"1310"	"17"	"38.000"	"31.000"	"1.28009234353289"	"18"	"0.001422"	"0.0196"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"822.41705"	"2465.23661"	"2465.24228"	"-2.30"	"-0.00189"	"4/166"	"4"	"166"	"62096.1005249023"	"HCD"	"MS2"	"5.730497"	"2.9"	"100.000"	"97.6467"	"33513"	"33513"	"33505"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	"3.9"	""	"2.9"	""	"5.5"	""	"6.1"	"7.2"	""	"1316"	"14"	"38.000"	"31.000"	"2.59552904765533"	"17"	"0.0006037"	"0.004909"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41705"	"2465.23661"	"2465.24228"	"-2.30"	"-0.00189"	"7/166"	"7"	"166"	"171927.316711426"	"HCD"	"MS2"	"19.36043"	"1.6"	"100.000"	"99.8751"	"34142"	"34142"	"34137"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	"2.6"	""	"2.7"	""	"4.7"	"5.3"	""	"1316"	"5"	"38.000"	"31.000"	"22.3988588823259"	"13"	"0.00109"	"0.01488"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41711"	"2465.23679"	"2465.24228"	"-2.23"	"-0.00183"	"3/166"	"3"	"166"	"46483.9100952148"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"96.2852"	"33110"	"33110"	"33106"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	"3.6"	""	"2.8"	""	"3.8"	"3.6"	""	"1317"	"3"	"38.000"	"31.000"	"32.4008034246235"	"13"	"0.002711"	"0.04113"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"822.41711"	"2465.23679"	"2465.24228"	"-2.23"	"-0.00183"	"11/166"	"11"	"166"	"168465.090148926"	"HCD"	"MS2"	"31.78492"	"8.3"	"100.000"	"86.7128"	"29825"	"29825"	"29801"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.5"	""	"4.1"	""	"9.6"	""	"17.1"	""	"18.1"	"19.5"	""	"1317"	"35"	"38.000"	"31.000"	"0.0204435248878252"	"16"	"0"	"0.0001412"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41718"	"2465.23697"	"2465.24228"	"-2.15"	"-0.00177"	"7/166"	"7"	"166"	"89019.859375"	"HCD"	"MS2"	"14.15916"	"3.5"	"100.000"	"94.3338"	"32539"	"32539"	"32530"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"3.3"	""	"7.3"	""	"4.7"	""	"8.2"	"3.4"	""	"1317"	"11"	"38.000"	"31.000"	"5.55335937987775"	"13"	"0.0006737"	"0.006495"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"822.41736"	"2465.23752"	"2465.24228"	"-1.93"	"-0.00159"	"11/166"	"11"	"166"	"245614.749206543"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"83.2397"	"28417"	"28417"	"28397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.6"	""	"12.0"	""	"12.2"	""	"22.0"	""	"22.1"	"21.3"	""	"1316"	"36"	"38.000"	"31.000"	"0.0153188404754358"	"20"	"0"	"1.784E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9375"	"0.0000"	"1"	"1"	"1"	"617.06488"	"2465.23769"	"2465.24228"	"-1.86"	"-0.00115"	"12/166"	"12"	"166"	"902685.471069336"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"78.0011"	"26281"	"26281"	"26257"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.1"	""	"25.7"	""	"28.4"	""	"38.5"	""	"57.7"	"74.3"	""	"1315"	"48"	"38.000"	"31.000"	"0.00115317642996096"	"18"	"0"	"1.053E-05"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"822.41748"	"2465.23789"	"2465.24228"	"-1.78"	"-0.00146"	"4/166"	"4"	"166"	"65182.8988647461"	"HCD"	"MS2"	"0"	"1.1"	"100.000"	"101.6789"	"34557"	"34557"	"34553"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	"2.3"	""	"5.8"	""	"2.3"	""	""	"1315"	"1"	"38.000"	"31.000"	"50.6869030909863"	"13"	"0.002711"	"0.04183"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"822.41760"	"2465.23825"	"2465.24228"	"-1.63"	"-0.00134"	"12/166"	"12"	"166"	"133565.177307129"	"HCD"	"MS2"	"7.695598"	"5.6"	"100.000"	"86.9984"	"29889"	"29889"	"29870"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"5.5"	""	"6.1"	""	"10.3"	""	"11.9"	"12.8"	""	"1320"	"44"	"38.000"	"31.000"	"0.0023743456120279"	"18"	"0.0001308"	"0.0002885"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"7"	"1233.12280"	"2465.23833"	"2465.24228"	"-1.60"	"-0.00198"	"3/166"	"3"	"166"	"69047.7157592773"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"77.9665"	"26267"	"26267"	"26241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.7"	""	"3.8"	""	"6.2"	""	"8.0"	""	"24.4"	"14.5"	""	"1315"	"2"	"38.000"	"31.000"	"43.0423284449233"	"13"	"0.003762"	"0.08713"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9620"	"0.0000"	"1"	"1"	"1"	"1233.12292"	"2465.23857"	"2465.24228"	"-1.50"	"-0.00185"	"21/166"	"21"	"166"	"1236373.80627441"	"HCD"	"MS2"	"0"	"95.1"	"100.000"	"76.9415"	"25848"	"25848"	"25829"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"112.8"	""	"90.1"	""	"117.1"	""	"152.7"	"0.1"	"220.7"	"211.4"	""	"1315"	"79"	"38.000"	"31.000"	"7.47989940428906E-07"	"21"	"0"	"4.257E-06"	"1.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"822.41772"	"2465.23862"	"2465.24228"	"-1.49"	"-0.00122"	"6/166"	"6"	"166"	"102118.948852539"	"HCD"	"MS2"	"7.878699"	"2.5"	"100.000"	"90.2600"	"31165"	"31165"	"31159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.4"	""	"4.6"	""	"6.2"	""	"6.3"	"4.7"	""	"1315"	"16"	"38.000"	"31.000"	"1.74540315699892"	"16"	"0.0006037"	"0.004157"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"822.41772"	"2465.23862"	"2465.24228"	"-1.49"	"-0.00122"	"11/166"	"11"	"166"	"165871.324645996"	"HCD"	"MS2"	"20.45927"	"6.3"	"100.000"	"85.7293"	"29376"	"29376"	"29352"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.7"	""	"8.0"	""	"8.9"	""	"10.9"	""	"10.8"	"13.7"	""	"1315"	"32"	"38.000"	"31.000"	"0.0390747094289739"	"16"	"0.0001859"	"0.0003172"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"822.41779"	"2465.23880"	"2465.24228"	"-1.41"	"-0.00116"	"4/166"	"4"	"166"	"74828.3251342773"	"HCD"	"MS2"	"71.66914"	"2.1"	"100.000"	"95.6990"	"32949"	"32949"	"32944"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"3.0"	""	"2.4"	""	"4.2"	""	"2.6"	"8.4"	""	"1316"	"11"	"38.000"	"31.000"	"4.97996044923801"	"15"	"0.0006037"	"0.004887"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"822.41779"	"2465.23880"	"2465.24228"	"-1.41"	"-0.00116"	"5/166"	"5"	"166"	"162246.200744629"	"HCD"	"MS2"	"11.95821"	"2.6"	"100.000"	"95.9700"	"33020"	"33020"	"33015"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.8"	""	"4.1"	""	"2.1"	""	"4.7"	""	"4.9"	"4.0"	""	"1316"	"7"	"38.000"	"31.000"	"14.6631032821986"	"14"	"0.002456"	"0.03629"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"1233.12305"	"2465.23882"	"2465.24228"	"-1.41"	"-0.00173"	"23/166"	"23"	"166"	"15887510.1870117"	"HCD"	"MS2"	"3.593058"	"343.8"	"31.593"	"76.6389"	"25728"	"25728"	"25722"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"419.7"	""	"362.8"	""	"392.5"	""	"572.8"	""	"773.8"	"747.8"	""	"1317"	"90"	"38.000"	"31.000"	"7.15411273151838E-08"	"21"	"0"	"7.414E-07"	"1.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"822.41785"	"2465.23899"	"2465.24228"	"-1.34"	"-0.00110"	"5/166"	"5"	"166"	"57965.7180786133"	"HCD"	"MS2"	"0"	"0.6"	"100.000"	"101.6795"	"34548"	"34548"	"34545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"2.4"	""	""	""	""	""	""	"3.3"	""	"1317"	"8"	"38.000"	"31.000"	"10.6550570478796"	"14"	"0.0008125"	"0.007476"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9828"	"0.0000"	"1"	"1"	"1"	"617.06525"	"2465.23916"	"2465.24228"	"-1.27"	"-0.00078"	"17/166"	"17"	"166"	"7013296.87579346"	"HCD"	"MS2"	"2.858283"	"102.3"	"96.907"	"77.2918"	"25991"	"25991"	"25973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"130.2"	""	"119.6"	""	"135.7"	""	"178.5"	"1.0"	"200.3"	"205.2"	""	"1308"	"58"	"38.000"	"31.000"	"9.49680997902383E-05"	"18"	"0"	"1.353E-06"	"1.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"822.41791"	"2465.23917"	"2465.24228"	"-1.26"	"-0.00104"	"6/166"	"6"	"166"	"77571.4577026367"	"HCD"	"MS2"	"7.367235"	"2.0"	"100.000"	"93.5165"	"32260"	"32260"	"32254"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.1"	""	""	""	"3.8"	""	"4.1"	""	"4.0"	"5.2"	""	"1308"	"15"	"38.000"	"31.000"	"2.21094402878712"	"16"	"0.0003839"	"0.002099"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"822.41791"	"2465.23917"	"2465.24228"	"-1.26"	"-0.00104"	"13/166"	"13"	"166"	"373136.146972656"	"HCD"	"MS2"	"4.446928"	"13.4"	"100.000"	"81.9872"	"27906"	"27906"	"27886"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.3"	""	"14.7"	""	"19.1"	"1.5"	"19.8"	""	"29.2"	"25.5"	""	"1308"	"46"	"38.000"	"31.000"	"0.00175217608443165"	"20"	"0"	"9.55E-06"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1233.12329"	"2465.23931"	"2465.24228"	"-1.21"	"-0.00149"	"8/166"	"8"	"166"	"132614.853271484"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"77.6240"	"26127"	"26127"	"26101"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.4"	""	"10.0"	""	"10.7"	""	"19.9"	""	"25.2"	"21.9"	""	"1309"	"15"	"38.000"	"31.000"	"2.15233392408331"	"13"	"0.0003839"	"0.001813"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9890"	"0.0000"	"1"	"1"	"1"	"1233.12329"	"2465.23931"	"2465.24228"	"-1.21"	"-0.00149"	"15/166"	"15"	"166"	"12748540.5997314"	"HCD"	"MS2"	"3.90404"	"310.0"	"35.585"	"76.7389"	"25717"	"25717"	"25706"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"381.3"	""	"319.6"	""	"363.4"	""	"509.7"	""	"693.9"	"683.8"	""	"1309"	"91"	"38.000"	"31.000"	"4.66562308217807E-08"	"19"	"0"	"1.09E-07"	"1.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"822.41797"	"2465.23935"	"2465.24228"	"-1.19"	"-0.00098"	"5/166"	"5"	"166"	"83088.3764648438"	"HCD"	"MS2"	"13.22984"	"3.0"	"100.000"	"88.2299"	"30416"	"30416"	"30405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.3"	""	""	""	"2.9"	""	"5.9"	""	"11.4"	"6.3"	""	"1309"	"8"	"38.000"	"31.000"	"11.0639358976052"	"16"	"0.0008731"	"0.009191"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41797"	"2465.23935"	"2465.24228"	"-1.19"	"-0.00098"	"7/166"	"7"	"166"	"132563.516540527"	"HCD"	"MS2"	"3.461221"	"1.0"	"100.000"	"102.2733"	"34685"	"34685"	"34682"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	"2.2"	""	"1.8"	""	"3.1"	"3.0"	""	"1309"	"8"	"38.000"	"31.000"	"10.3254657601822"	"13"	"0.001058"	"0.01419"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41797"	"2465.23935"	"2465.24228"	"-1.19"	"-0.00098"	"5/166"	"5"	"166"	"122810.73626709"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"102.0011"	"34633"	"34633"	"34628"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	"2.3"	""	""	""	"2.9"	"4.4"	""	"1309"	"5"	"38.000"	"31.000"	"21.8227587153538"	"13"	"0.002981"	"0.05731"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9516"	"0.0000"	"1"	"1"	"1"	"822.41797"	"2465.23935"	"2465.24228"	"-1.19"	"-0.00098"	"20/166"	"20"	"166"	"2836708.69445801"	"HCD"	"MS2"	"26.62474"	"73.5"	"100.000"	"76.3450"	"25560"	"25560"	"25537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.5"	""	"77.8"	""	"88.3"	""	"131.8"	""	"158.6"	"146.1"	""	"1309"	"62"	"38.000"	"31.000"	"4.53847190037844E-05"	"20"	"0"	"1.976E-07"	"1.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41803"	"2465.23954"	"2465.24228"	"-1.11"	"-0.00092"	"3/166"	"3"	"166"	"72267.0659790039"	"HCD"	"MS2"	"0"	"2.3"	"100.000"	"90.5347"	"31263"	"31263"	"31251"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.8"	""	""	""	"3.8"	""	"3.2"	""	"7.9"	"4.3"	""	"1309"	"3"	"38.000"	"31.000"	"35.8847273540699"	"13"	"0.002953"	"0.05133"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"822.41803"	"2465.23954"	"2465.24228"	"-1.11"	"-0.00092"	"12/166"	"12"	"166"	"281497.182983398"	"HCD"	"MS2"	"15.05956"	"11.0"	"100.000"	"82.9377"	"28294"	"28294"	"28269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.8"	""	"12.8"	""	"15.8"	""	"18.2"	""	"22.1"	"23.6"	""	"1309"	"26"	"38.000"	"31.000"	"0.154493300361669"	"17"	"0"	"0.0001209"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41803"	"2465.23954"	"2465.24228"	"-1.11"	"-0.00092"	"12/166"	"12"	"166"	"303773.159790039"	"HCD"	"MS2"	"53.52483"	"9.5"	"100.000"	"84.2413"	"28826"	"28826"	"28801"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.7"	""	"10.0"	""	"14.9"	""	"15.9"	""	"19.4"	"17.0"	""	"1309"	"13"	"38.000"	"31.000"	"3.05428564415702"	"13"	"0.0003839"	"0.001695"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1233.12341"	"2465.23955"	"2465.24228"	"-1.11"	"-0.00137"	"18/166"	"18"	"166"	"626121.39251709"	"HCD"	"MS2"	"0"	"52.0"	"100.000"	"77.2968"	"25993"	"25993"	"25973"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.9"	""	"52.2"	""	"65.7"	""	"96.7"	""	"100.8"	"114.2"	""	"1309"	"71"	"38.000"	"31.000"	"5.51962598956719E-06"	"17"	"0"	"5.94E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9808"	"0.0000"	"1"	"1"	"1"	"617.06537"	"2465.23964"	"2465.24228"	"-1.07"	"-0.00066"	"14/166"	"14"	"166"	"117437697.28418"	"HCD"	"MS2"	"0.3150055"	"114.2"	"6.499"	"76.6595"	"25736"	"25736"	"25727"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.3"	""	"124.7"	""	"137.1"	""	"184.6"	""	"245.7"	"259.0"	""	"1308"	"52"	"38.000"	"31.000"	"0.000431099727489786"	"17"	"0"	"4.982E-06"	"1.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"822.41809"	"2465.23972"	"2465.24228"	"-1.04"	"-0.00085"	"5/166"	"5"	"166"	"91974.599609375"	"HCD"	"MS2"	"8.621819"	"2.7"	"100.000"	"91.6283"	"31638"	"31638"	"31628"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"4.1"	""	"7.1"	""	"6.3"	""	"3.4"	"5.0"	""	"1308"	"9"	"38.000"	"31.000"	"7.57840390925452"	"15"	"0.00385"	"0.09752"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"822.41809"	"2465.23972"	"2465.24228"	"-1.04"	"-0.00085"	"9/166"	"9"	"166"	"100586.19909668"	"HCD"	"MS2"	"9.854289"	"3.8"	"100.000"	"87.6552"	"30202"	"30202"	"30192"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.0"	""	"3.1"	""	"4.4"	""	"6.7"	""	"9.6"	"6.9"	""	"1308"	"25"	"38.000"	"31.000"	"0.223654555403966"	"20"	"0.0001889"	"0.0006587"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"822.41809"	"2465.23972"	"2465.24228"	"-1.04"	"-0.00085"	"12/166"	"12"	"166"	"188302.036865234"	"HCD"	"MS2"	"48.77195"	"7.7"	"100.000"	"85.7275"	"29427"	"29427"	"29405"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"8.7"	""	"12.4"	""	"9.9"	""	"13.5"	"19.6"	""	"1308"	"49"	"38.000"	"31.000"	"0.000830955464806386"	"18"	"0"	"1.794E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"822.41815"	"2465.23990"	"2465.24228"	"-0.97"	"-0.00079"	"7/166"	"7"	"166"	"66832.545715332"	"HCD"	"MS2"	"9.192462"	"2.7"	"100.000"	"89.6829"	"30953"	"30953"	"30932"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.2"	""	"5.7"	""	"3.3"	""	"4.9"	""	"4.9"	"5.1"	""	"1308"	"9"	"38.000"	"31.000"	"7.45723361065004"	"14"	"0.000523"	"0.002783"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"822.41815"	"2465.23990"	"2465.24228"	"-0.97"	"-0.00079"	"4/166"	"4"	"166"	"63464.5542602539"	"HCD"	"MS2"	"5.48461"	"1.2"	"100.000"	"89.9874"	"31066"	"31066"	"31054"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.2"	""	""	""	"3.9"	""	""	"5.8"	""	"1308"	"15"	"38.000"	"31.000"	"2.19572399714892"	"18"	"0.0006737"	"0.006625"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9344"	"0.0000"	"1"	"1"	"1"	"822.41815"	"2465.23990"	"2465.24228"	"-0.97"	"-0.00079"	"15/166"	"15"	"166"	"701044.361572266"	"HCD"	"MS2"	"15.20494"	"22.2"	"100.000"	"80.0296"	"27108"	"27108"	"27087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.9"	""	"28.0"	""	"24.6"	""	"38.1"	""	"48.0"	"44.9"	""	"1308"	"61"	"38.000"	"31.000"	"5.25506083909393E-05"	"21"	"0"	"2.491E-06"	"1.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"822.41815"	"2465.23990"	"2465.24228"	"-0.97"	"-0.00079"	"18/166"	"18"	"166"	"2993656.11340332"	"HCD"	"MS2"	"4.132512"	"70.3"	"100.000"	"79.4338"	"26865"	"26865"	"26847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.2"	""	"84.4"	""	"84.9"	""	"126.0"	""	"151.9"	"141.2"	""	"1308"	"66"	"38.000"	"31.000"	"1.54731148215568E-05"	"21"	"0"	"1.319E-06"	"1.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"1233.12366"	"2465.24004"	"2465.24228"	"-0.91"	"-0.00112"	"5/166"	"5"	"166"	"60404.3436279297"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"73.1729"	"24271"	"24271"	"24241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.8"	""	"4.3"	""	"6.3"	""	"9.3"	""	"10.2"	"8.5"	""	"1314"	"2"	"38.000"	"31.000"	"44.7265468661788"	"13"	"0.001912"	"0.02717"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"822.41821"	"2465.24009"	"2465.24228"	"-0.89"	"-0.00073"	"6/166"	"6"	"166"	"120080.021911621"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"100.4937"	"34287"	"34287"	"34282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.6"	""	"2.5"	""	"2.3"	""	""	""	"5.4"	"3.3"	""	"1315"	"5"	"38.000"	"31.000"	"19.3595722422269"	"15"	"0.001966"	"0.02984"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.8246"	"0.0000"	"1"	"1"	"1"	"617.06549"	"2465.24013"	"2465.24228"	"-0.87"	"-0.00054"	"16/166"	"16"	"166"	"10379620.8030396"	"HCD"	"MS2"	"1.418314"	"107.3"	"64.398"	"76.9739"	"25862"	"25862"	"25845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.7"	""	"110.5"	""	"132.5"	""	"173.1"	""	"243.2"	"229.2"	""	"1317"	"57"	"38.000"	"31.000"	"0.000145732286627531"	"26"	"0"	"3.066E-06"	"1.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"822.41827"	"2465.24027"	"2465.24228"	"-0.82"	"-0.00067"	"9/166"	"9"	"166"	"137718.385070801"	"HCD"	"MS2"	"7.738632"	"6.0"	"100.000"	"86.0388"	"29553"	"29553"	"29529"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.5"	""	"6.3"	""	"7.9"	""	"11.3"	""	"13.4"	"8.9"	""	"1318"	"27"	"38.000"	"31.000"	"0.119367312103632"	"19"	"0.0001859"	"0.0003605"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41827"	"2465.24027"	"2465.24228"	"-0.82"	"-0.00067"	"4/166"	"4"	"166"	"122174.819824219"	"HCD"	"MS2"	"7.706373"	"1.6"	"100.000"	"97.9135"	"33591"	"33591"	"33587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	"2.3"	""	"4.1"	""	"4.7"	"4.1"	""	"1318"	"4"	"38.000"	"31.000"	"24.1482361692922"	"13"	"0.002981"	"0.05537"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.2308"	"0.0000"	"1"	"1"	"1"	"822.41827"	"2465.24027"	"2465.24228"	"-0.82"	"-0.00067"	"4/166"	"4"	"166"	"108731.107666016"	"HCD"	"MS2"	"0"	"0.8"	"100.000"	"101.0909"	"34431"	"34431"	"34424"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	"2.5"	""	"2.3"	"3.1"	""	"1318"	"13"	"38.000"	"31.000"	"3.30282386960372"	"23"	"0.001217"	"0.01794"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"822.41827"	"2465.24027"	"2465.24228"	"-0.82"	"-0.00067"	"19/166"	"19"	"166"	"7187371.97753906"	"HCD"	"MS2"	"4.088499"	"150.2"	"100.000"	"74.5384"	"24880"	"24880"	"24863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"215.0"	""	"160.1"	""	"186.8"	""	"245.8"	""	"307.2"	"314.3"	""	"1318"	"60"	"38.000"	"31.000"	"6.75904619399677E-05"	"20"	"0"	"1.964E-07"	"1.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9623"	"0.0000"	"1"	"1"	"1"	"617.06555"	"2465.24038"	"2465.24228"	"-0.77"	"-0.00048"	"14/166"	"14"	"166"	"116317109.766602"	"HCD"	"MS2"	"0"	"127.1"	"6.982"	"76.7138"	"25707"	"25707"	"25699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.3"	""	"131.5"	""	"160.5"	""	"218.1"	""	"270.7"	"281.8"	""	"1318"	"53"	"38.000"	"31.000"	"0.000322021904806927"	"17"	"0"	"1.899E-06"	"1.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"3"	"822.41833"	"2465.24045"	"2465.24228"	"-0.74"	"-0.00061"	"4/166"	"4"	"166"	"61719.8025512695"	"HCD"	"MS2"	"6.062347"	"2.4"	"100.000"	"96.5547"	"33188"	"33188"	"33184"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"5.6"	""	""	""	"7.6"	""	"5.5"	"4.8"	""	"1317"	"6"	"38.000"	"31.000"	"17.3203147266311"	"16"	"0.001488"	"0.02043"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"822.41833"	"2465.24045"	"2465.24228"	"-0.74"	"-0.00061"	"11/166"	"11"	"166"	"165992.710693359"	"HCD"	"MS2"	"6.883088"	"6.6"	"100.000"	"84.9361"	"29058"	"29058"	"29035"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"8.7"	""	"7.9"	""	"11.8"	""	"15.7"	"11.9"	""	"1317"	"26"	"38.000"	"31.000"	"0.170041833553288"	"18"	"0.0001859"	"0.0003342"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"822.41833"	"2465.24045"	"2465.24228"	"-0.74"	"-0.00061"	"15/166"	"15"	"166"	"320135.323181152"	"HCD"	"MS2"	"31.74741"	"14.8"	"100.000"	"82.7929"	"28184"	"28184"	"28160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.4"	""	"16.3"	""	"17.7"	""	"20.3"	""	"31.2"	"35.0"	""	"1317"	"46"	"38.000"	"31.000"	"0.00183889011945479"	"20"	"0"	"4.05E-06"	"1.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"1233.12390"	"2465.24053"	"2465.24228"	"-0.71"	"-0.00088"	"8/166"	"8"	"166"	"422670.047363281"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"78.9722"	"26677"	"26677"	"26655"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.8"	""	"38.1"	""	"48.2"	""	"60.0"	""	"80.1"	"90.1"	""	"1317"	"53"	"38.000"	"31.000"	"0.000350393288727184"	"17"	"0"	"3.372E-05"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"617.06561"	"2465.24062"	"2465.24228"	"-0.67"	"-0.00042"	"14/166"	"14"	"166"	"1138021.7166748"	"HCD"	"MS2"	"26.8956"	"35.8"	"100.000"	"78.9544"	"26619"	"26619"	"26593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.4"	""	"34.6"	""	"33.1"	""	"37.9"	""	"61.6"	"147.0"	""	"1320"	"41"	"38.000"	"31.000"	"0.00570878826391957"	"15"	"0"	"2.059E-05"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9744"	"0.0000"	"1"	"1"	"1"	"617.06561"	"2465.24062"	"2465.24228"	"-0.67"	"-0.00042"	"11/166"	"11"	"166"	"1858359.55096436"	"HCD"	"MS2"	"26.27384"	"45.3"	"100.000"	"78.9791"	"26680"	"26680"	"26655"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.3"	""	"47.7"	""	"45.0"	""	"56.7"	""	"85.6"	"163.3"	""	"1320"	"39"	"38.000"	"31.000"	"0.00915258847055446"	"16"	"0"	"2.095E-05"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41840"	"2465.24063"	"2465.24228"	"-0.67"	"-0.00055"	"7/166"	"7"	"166"	"138619.744506836"	"HCD"	"MS2"	"23.32135"	"2.1"	"100.000"	"102.6073"	"34754"	"34754"	"34750"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.1"	""	""	""	"3.4"	""	"4.0"	""	"5.8"	"5.2"	""	"1320"	"7"	"38.000"	"31.000"	"14.6400963706814"	"13"	"0.0008125"	"0.007562"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"1233.12402"	"2465.24077"	"2465.24228"	"-0.61"	"-0.00076"	"10/166"	"10"	"166"	"224440.411743164"	"HCD"	"MS2"	"0"	"18.7"	"100.000"	"74.6171"	"24860"	"24860"	"24833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.7"	""	"21.3"	""	"23.4"	""	"31.2"	""	"39.0"	"42.3"	""	"1312"	"29"	"38.000"	"31.000"	"0.0825855070136975"	"16"	"0.0001889"	"0.0007318"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1233.12402"	"2465.24077"	"2465.24228"	"-0.61"	"-0.00076"	"20/166"	"20"	"166"	"838987.123413086"	"HCD"	"MS2"	"0"	"70.9"	"100.000"	"77.0371"	"25836"	"25836"	"25817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.7"	""	"69.2"	""	"86.7"	""	"117.8"	""	"158.1"	"162.9"	""	"1312"	"77"	"38.000"	"31.000"	"1.27909805744128E-06"	"18"	"0"	"3.773E-06"	"1.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"822.41846"	"2465.24082"	"2465.24228"	"-0.59"	"-0.00049"	"7/166"	"7"	"166"	"80469.8818969727"	"HCD"	"MS2"	"9.060365"	"3.2"	"100.000"	"88.5153"	"30523"	"30523"	"30507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.6"	""	"2.3"	""	"6.9"	""	"5.5"	""	"4.8"	"7.2"	""	"1310"	"14"	"38.000"	"31.000"	"2.38364348663321"	"18"	"0.0006037"	"0.003699"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"822.41846"	"2465.24082"	"2465.24228"	"-0.59"	"-0.00049"	"5/166"	"5"	"166"	"83278.5433959961"	"HCD"	"MS2"	"30.56542"	"3.3"	"100.000"	"89.3644"	"30834"	"30834"	"30821"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.0"	""	"2.1"	""	"4.8"	""	"6.2"	""	"4.7"	"8.9"	""	"1310"	"8"	"38.000"	"31.000"	"10.4771050874261"	"16"	"0.001007"	"0.01082"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"822.41846"	"2465.24082"	"2465.24228"	"-0.59"	"-0.00049"	"5/166"	"5"	"166"	"80758.1017456055"	"HCD"	"MS2"	"10.38023"	"1.9"	"100.000"	"99.5915"	"34065"	"34065"	"34059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.0"	""	"3.1"	""	""	""	"4.2"	""	"5.2"	"3.3"	""	"1310"	"9"	"38.000"	"31.000"	"7.76678530049491"	"17"	"0.0006037"	"0.005436"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9538"	"0.0000"	"1"	"1"	"1"	"822.41846"	"2465.24082"	"2465.24228"	"-0.59"	"-0.00049"	"15/166"	"15"	"166"	"575010.824645996"	"HCD"	"MS2"	"3.471309"	"16.4"	"100.000"	"80.3970"	"27207"	"27207"	"27185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.3"	""	"18.1"	""	"18.2"	""	"27.8"	""	"40.1"	"35.8"	""	"1310"	"65"	"38.000"	"31.000"	"2.05230214942671E-05"	"19"	"0"	"3.805E-06"	"1.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"822.41852"	"2465.24100"	"2465.24228"	"-0.52"	"-0.00043"	"5/166"	"5"	"166"	"68967.8850708008"	"HCD"	"MS2"	"21.98607"	"2.4"	"100.000"	"100.0180"	"34160"	"34160"	"34156"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.0"	""	"1.8"	""	"1.9"	""	"3.6"	""	"5.8"	"4.4"	""	"1311"	"9"	"38.000"	"31.000"	"8.781580686077"	"16"	"0.00109"	"0.01474"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"822.41852"	"2465.24100"	"2465.24228"	"-0.52"	"-0.00043"	"4/166"	"4"	"166"	"77306.1849975586"	"HCD"	"MS2"	"20.0689"	"2.6"	"100.000"	"92.9828"	"32089"	"32089"	"32083"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.0"	""	"2.9"	""	"3.3"	""	"6.7"	""	"5.4"	"4.3"	""	"1311"	"3"	"38.000"	"31.000"	"36.6921107780045"	"14"	"0.001912"	"0.02704"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"822.41852"	"2465.24100"	"2465.24228"	"-0.52"	"-0.00043"	"15/166"	"15"	"166"	"360394.791625977"	"HCD"	"MS2"	"34.78399"	"18.9"	"100.000"	"82.5014"	"28116"	"28116"	"28094"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"26.7"	""	"27.4"	""	"25.4"	"0.7"	"40.9"	"36.2"	""	"1311"	"40"	"38.000"	"31.000"	"0.00707249576421653"	"17"	"0"	"0.0001312"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"822.41852"	"2465.24100"	"2465.24228"	"-0.52"	"-0.00043"	"14/166"	"14"	"166"	"542466.407653809"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"80.3825"	"27252"	"27252"	"27231"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.1"	""	"20.7"	""	"22.9"	""	"26.7"	"0.5"	"42.1"	"35.8"	""	"1311"	"58"	"38.000"	"31.000"	"9.85309558772011E-05"	"22"	"0"	"4.244E-06"	"1.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"1233.12415"	"2465.24101"	"2465.24228"	"-0.51"	"-0.00063"	"5/166"	"5"	"166"	"95567.8696899414"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"77.7034"	"26108"	"26108"	"26089"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.3"	""	"5.7"	""	"9.0"	""	"10.6"	""	"19.0"	"19.7"	""	"1310"	"1"	"38.000"	"31.000"	"51.3146416011869"	"13"	"0.005448"	"0.1736"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"1233.12415"	"2465.24101"	"2465.24228"	"-0.51"	"-0.00063"	"10/166"	"10"	"166"	"126931.74206543"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"79.2614"	"26744"	"26744"	"26721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.1"	""	"12.1"	""	"13.6"	""	"11.4"	""	"22.0"	"19.9"	""	"1310"	"27"	"38.000"	"31.000"	"0.121686191808506"	"16"	"0.0001889"	"0.0006936"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1233.12415"	"2465.24101"	"2465.24228"	"-0.51"	"-0.00063"	"14/166"	"14"	"166"	"754790.207702637"	"HCD"	"MS2"	"0"	"65.4"	"100.000"	"77.3874"	"25979"	"25979"	"25961"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"89.0"	""	"80.3"	""	"79.6"	""	"104.3"	"0.1"	"137.7"	"129.6"	""	"1310"	"38"	"38.000"	"31.000"	"0.0105740485472135"	"15"	"0"	"9.646E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.8906"	"0.0000"	"1"	"1"	"1"	"617.06573"	"2465.24111"	"2465.24228"	"-0.48"	"-0.00029"	"14/166"	"14"	"166"	"2443718.43231201"	"HCD"	"MS2"	"18.2678"	"49.4"	"100.000"	"74.6308"	"24917"	"24917"	"24895"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.4"	""	"53.4"	""	"67.4"	""	"84.7"	"1.8"	"102.1"	"107.2"	""	"1310"	"64"	"38.000"	"31.000"	"2.74309785152237E-05"	"24"	"0"	"2.02E-06"	"1.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9688"	"0.0000"	"1"	"1"	"1"	"617.06573"	"2465.24111"	"2465.24228"	"-0.48"	"-0.00029"	"19/166"	"19"	"166"	"17661743.897583"	"HCD"	"MS2"	"0.8245199"	"247.5"	"100.000"	"76.3960"	"25632"	"25632"	"25615"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"314.1"	""	"265.4"	""	"308.2"	""	"416.4"	""	"538.2"	"512.4"	""	"1310"	"64"	"38.000"	"31.000"	"2.42237457756075E-05"	"18"	"0"	"2.153E-07"	"1.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41858"	"2465.24118"	"2465.24228"	"-0.45"	"-0.00037"	"4/166"	"4"	"166"	"65413.1694335938"	"HCD"	"MS2"	"16.39633"	"1.9"	"100.000"	"97.1512"	"33363"	"33363"	"33359"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.0"	""	"2.7"	""	""	""	"3.9"	""	"6.3"	"3.1"	""	"1309"	"1"	"38.000"	"31.000"	"51.1575398103062"	"13"	"0.002981"	"0.05709"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"822.41858"	"2465.24118"	"2465.24228"	"-0.45"	"-0.00037"	"4/166"	"4"	"166"	"84846.224609375"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"90.0978"	"31074"	"31074"	"31064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.5"	""	""	""	""	""	"3.4"	""	"4.3"	"7.3"	""	"1309"	"12"	"38.000"	"31.000"	"4.17743451711714"	"14"	"0.003507"	"0.0806"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"822.41858"	"2465.24118"	"2465.24228"	"-0.45"	"-0.00037"	"4/166"	"4"	"166"	"83403.5838012695"	"HCD"	"MS2"	"15.66252"	"2.2"	"100.000"	"98.4450"	"33736"	"33736"	"33734"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"1.8"	""	"2.5"	""	"3.3"	""	"4.1"	""	"4.1"	"5.1"	""	"1309"	"5"	"38.000"	"31.000"	"20.2726093133725"	"15"	"0.001389"	"0.01925"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"822.41858"	"2465.24118"	"2465.24228"	"-0.45"	"-0.00037"	"9/166"	"9"	"166"	"157775.673400879"	"HCD"	"MS2"	"7.655598"	"7.4"	"100.000"	"86.3574"	"29682"	"29682"	"29654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"8.3"	""	"10.0"	""	"12.4"	""	"15.4"	"15.5"	""	"1309"	"21"	"38.000"	"31.000"	"0.566121502838692"	"16"	"0.0001889"	"0.0004442"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"822.41858"	"2465.24118"	"2465.24228"	"-0.45"	"-0.00037"	"14/166"	"14"	"166"	"225175.11730957"	"HCD"	"MS2"	"5.359831"	"8.8"	"100.000"	"83.5623"	"28498"	"28498"	"28476"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.5"	""	"9.8"	""	"11.3"	""	"15.3"	""	"18.9"	"19.5"	""	"1309"	"45"	"38.000"	"31.000"	"0.00225377029684605"	"19"	"0"	"1.269E-05"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8246"	"0.0000"	"1"	"1"	"1"	"822.41858"	"2465.24118"	"2465.24228"	"-0.45"	"-0.00037"	"13/166"	"13"	"166"	"217323.33972168"	"HCD"	"MS2"	"19.88212"	"9.2"	"100.000"	"83.8547"	"28617"	"28617"	"28596"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.4"	""	"7.6"	""	"13.5"	""	"16.5"	""	"19.0"	"20.3"	""	"1309"	"57"	"38.000"	"31.000"	"0.000135179131197799"	"26"	"0"	"3.004E-05"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"822.41858"	"2465.24118"	"2465.24228"	"-0.45"	"-0.00037"	"14/166"	"14"	"166"	"226778.229614258"	"HCD"	"MS2"	"36.63729"	"9.1"	"100.000"	"83.9278"	"28698"	"28698"	"28677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.8"	""	"11.7"	""	"10.0"	""	"12.7"	""	"18.3"	"24.9"	""	"1309"	"46"	"38.000"	"31.000"	"0.00155206409035555"	"17"	"0"	"3.245E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9194"	"0.0000"	"1"	"1"	"1"	"822.41858"	"2465.24118"	"2465.24228"	"-0.45"	"-0.00037"	"15/166"	"15"	"166"	"1208607.27947998"	"HCD"	"MS2"	"0"	"30.6"	"100.000"	"81.3542"	"27648"	"27648"	"27630"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.6"	""	"36.3"	""	"40.0"	""	"43.3"	""	"71.9"	"61.0"	""	"1309"	"62"	"38.000"	"31.000"	"3.7662543898717E-05"	"21"	"0"	"2.293E-06"	"1.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"822.41858"	"2465.24118"	"2465.24228"	"-0.45"	"-0.00037"	"17/166"	"17"	"166"	"1962268.15740967"	"HCD"	"MS2"	"0"	"49.7"	"100.000"	"78.6179"	"26482"	"26482"	"26465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.2"	""	"55.0"	""	"64.8"	""	"74.4"	"0.5"	"114.0"	"101.3"	""	"1309"	"62"	"38.000"	"31.000"	"3.84511781230739E-05"	"21"	"0"	"4.523E-07"	"1.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"822.41858"	"2465.24118"	"2465.24228"	"-0.45"	"-0.00037"	"19/166"	"19"	"166"	"6348308.9744873"	"HCD"	"MS2"	"0"	"144.5"	"100.000"	"77.8965"	"26187"	"26187"	"26169"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.9"	""	"75.9"	""	"138.4"	""	"170.3"	""	"632.7"	"279.8"	""	"1309"	"66"	"38.000"	"31.000"	"1.63271224878416E-05"	"20"	"0"	"9.687E-08"	"1.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41864"	"2465.24137"	"2465.24228"	"-0.37"	"-0.00031"	"5/166"	"5"	"166"	"59399.0904541016"	"HCD"	"MS2"	"0"	"1.2"	"100.000"	"100.6374"	"34306"	"34306"	"34301"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"2.1"	""	"3.3"	""	"3.7"	"2.4"	""	"1308"	"5"	"38.000"	"31.000"	"20.6337302368701"	"13"	"0.001389"	"0.01914"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"822.41864"	"2465.24137"	"2465.24228"	"-0.37"	"-0.00031"	"13/166"	"13"	"166"	"166596.559875488"	"HCD"	"MS2"	"14.63001"	"7.6"	"100.000"	"84.9883"	"29130"	"29130"	"29106"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.3"	""	"8.4"	""	"11.8"	""	"15.5"	""	"15.6"	"13.0"	""	"1308"	"52"	"38.000"	"31.000"	"0.000396805559550882"	"19"	"0"	"2.255E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"822.41864"	"2465.24137"	"2465.24228"	"-0.37"	"-0.00031"	"5/166"	"5"	"166"	"111346.592224121"	"HCD"	"MS2"	"21.32124"	"2.3"	"100.000"	"90.8065"	"31357"	"31357"	"31346"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	""	""	"4.6"	""	"3.8"	""	"4.9"	"5.6"	""	"1308"	"8"	"38.000"	"31.000"	"11.1577788240804"	"15"	"0.00109"	"0.01491"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9444"	"0.0000"	"1"	"1"	"1"	"617.06580"	"2465.24135"	"2465.24228"	"-0.38"	"-0.00023"	"13/166"	"13"	"166"	"1947852.85101318"	"HCD"	"MS2"	"16.64961"	"39.0"	"100.000"	"74.6770"	"24884"	"24884"	"24865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.5"	""	"42.3"	""	"49.0"	""	"61.2"	""	"82.2"	"89.1"	""	"1308"	"54"	"38.000"	"31.000"	"0.000262166833328256"	"19"	"0"	"2.695E-05"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.3889"	"0.0000"	"1"	"1"	"1"	"822.41870"	"2465.24155"	"2465.24228"	"-0.30"	"-0.00024"	"6/166"	"6"	"166"	"69171.2971191406"	"HCD"	"MS2"	"5.519307"	"1.6"	"100.000"	"93.2599"	"32180"	"32180"	"32175"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.3"	""	""	""	""	""	"4.9"	""	"3.3"	"3.7"	""	"1320"	"18"	"38.000"	"31.000"	"1.08778717840684"	"25"	"0.0002277"	"0.001222"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"822.41870"	"2465.24155"	"2465.24228"	"-0.30"	"-0.00024"	"9/166"	"9"	"166"	"107737.075256348"	"HCD"	"MS2"	"100"	"5.2"	"100.000"	"85.3809"	"29290"	"29290"	"29266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"7.0"	""	"4.7"	""	"9.7"	""	"9.5"	"11.7"	""	"1320"	"17"	"38.000"	"31.000"	"1.34754704348189"	"14"	"0.0001889"	"0.0007787"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"3"	"822.41870"	"2465.24155"	"2465.24228"	"-0.30"	"-0.00024"	"4/166"	"4"	"166"	"98072.0251464844"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"103.4341"	"34930"	"34930"	"34926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.5"	""	"2.3"	""	"2.4"	""	"2.7"	""	"3.2"	"5.1"	""	"1320"	"0"	"38.000"	"31.000"	"59.9161549917602"	"13"	"0.008152"	"0.3457"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"822.41870"	"2465.24155"	"2465.24228"	"-0.30"	"-0.00024"	"12/166"	"12"	"166"	"381150.529846191"	"HCD"	"MS2"	"21.82798"	"20.2"	"100.000"	"82.4742"	"28054"	"28054"	"28032"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.8"	""	"31.9"	""	"22.5"	""	"28.3"	""	"44.1"	"47.2"	""	"1320"	"37"	"38.000"	"31.000"	"0.013017990058358"	"17"	"0"	"0.0001746"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8070"	"0.0000"	"1"	"1"	"1"	"822.41870"	"2465.24155"	"2465.24228"	"-0.30"	"-0.00024"	"14/166"	"14"	"166"	"507373.07800293"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"80.6941"	"27379"	"27379"	"27358"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.0"	""	"16.5"	""	"16.8"	""	"24.1"	""	"32.3"	"36.0"	""	"1320"	"57"	"38.000"	"31.000"	"0.000128986404081176"	"27"	"0"	"2.673E-06"	"1.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"617.06586"	"2465.24160"	"2465.24228"	"-0.28"	"-0.00017"	"13/166"	"13"	"166"	"10550812.1192627"	"HCD"	"MS2"	"1.168849"	"103.4"	"61.081"	"77.0348"	"25835"	"25835"	"25817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.8"	""	"107.1"	""	"130.7"	""	"185.0"	""	"211.9"	"234.4"	""	"1320"	"50"	"38.000"	"31.000"	"0.000663046421583741"	"16"	"0"	"3.243E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"822.41876"	"2465.24173"	"2465.24228"	"-0.22"	"-0.00018"	"6/166"	"6"	"166"	"74169.6676025391"	"HCD"	"MS2"	"29.17472"	"3.9"	"100.000"	"89.2065"	"30732"	"30732"	"30719"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"5.4"	""	"7.6"	""	"3.5"	""	"7.7"	"9.2"	""	"1318"	"14"	"38.000"	"31.000"	"2.69082475593244"	"15"	"0.000523"	"0.003067"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"822.41876"	"2465.24173"	"2465.24228"	"-0.22"	"-0.00018"	"7/166"	"7"	"166"	"75498.0885620117"	"HCD"	"MS2"	"20.08261"	"2.2"	"100.000"	"91.2177"	"31476"	"31476"	"31465"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.7"	""	""	""	"2.2"	""	"6.1"	""	"7.2"	"2.3"	""	"1318"	"14"	"38.000"	"31.000"	"2.78538616801032"	"17"	"0.0006037"	"0.005226"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"822.41876"	"2465.24173"	"2465.24228"	"-0.22"	"-0.00018"	"5/166"	"5"	"166"	"77002.5060424805"	"HCD"	"MS2"	"5.088399"	"2.0"	"100.000"	"100.3408"	"34232"	"34232"	"34230"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.1"	""	"3.0"	""	""	""	"3.7"	""	"4.1"	"5.8"	""	"1318"	"8"	"38.000"	"31.000"	"10.1832267565581"	"16"	"0.001058"	"0.01457"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"822.41876"	"2465.24173"	"2465.24228"	"-0.22"	"-0.00018"	"6/166"	"6"	"166"	"91037.8790893555"	"HCD"	"MS2"	"18.91409"	"1.9"	"100.000"	"100.2133"	"34228"	"34228"	"34224"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	""	""	"3.3"	""	"4.8"	""	"2.8"	"5.2"	""	"1318"	"0"	"38.000"	"31.000"	"63.9566068414778"	"13"	"0.001587"	"0.02101"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8269"	"0.0000"	"1"	"1"	"1"	"822.41876"	"2465.24173"	"2465.24228"	"-0.22"	"-0.00018"	"14/166"	"14"	"166"	"423470.524353027"	"HCD"	"MS2"	"22.70665"	"16.4"	"100.000"	"81.7656"	"27765"	"27765"	"27744"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.4"	""	"15.2"	""	"24.2"	""	"26.9"	""	"35.5"	"34.4"	""	"1318"	"52"	"38.000"	"31.000"	"0.000438415009936947"	"25"	"0"	"2.24E-06"	"1.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"822.41876"	"2465.24173"	"2465.24228"	"-0.22"	"-0.00018"	"17/166"	"17"	"166"	"1080048.84729004"	"HCD"	"MS2"	"6.460457"	"35.7"	"100.000"	"74.9373"	"25042"	"25042"	"25023"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.2"	""	"40.4"	""	"50.4"	""	"58.2"	""	"74.1"	"70.9"	""	"1318"	"39"	"38.000"	"31.000"	"0.00741114677844204"	"20"	"0"	"1.05E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8769"	"0.0000"	"1"	"1"	"1"	"822.41876"	"2465.24173"	"2465.24228"	"-0.22"	"-0.00018"	"21/166"	"21"	"166"	"2771445.82318115"	"HCD"	"MS2"	"1.304686"	"63.7"	"100.000"	"78.0956"	"26320"	"26320"	"26303"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.7"	""	"71.6"	""	"61.8"	""	"97.5"	""	"156.4"	"150.8"	""	"1318"	"65"	"38.000"	"31.000"	"1.99933429038402E-05"	"25"	"0"	"2.661E-07"	"1.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9296"	"0.0000"	"1"	"1"	"1"	"822.41876"	"2465.24173"	"2465.24228"	"-0.22"	"-0.00018"	"18/166"	"18"	"166"	"3114124.23797607"	"HCD"	"MS2"	"0"	"67.4"	"100.000"	"78.4095"	"26448"	"26448"	"26431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.5"	""	"76.6"	""	"90.8"	""	"108.5"	""	"145.8"	"130.2"	""	"1318"	"71"	"38.000"	"31.000"	"5.16280134582934E-06"	"22"	"0"	"1.024E-07"	"1.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1233.12451"	"2465.24175"	"2465.24228"	"-0.22"	"-0.00027"	"12/166"	"12"	"166"	"245802.510864258"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"74.6468"	"24924"	"24924"	"24895"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.3"	""	"27.3"	""	"29.5"	""	"31.5"	""	"46.4"	"48.5"	""	"1318"	"31"	"38.000"	"31.000"	"0.0494180283950088"	"14"	"0.0001308"	"0.0003024"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1233.12451"	"2465.24175"	"2465.24228"	"-0.22"	"-0.00027"	"19/166"	"19"	"166"	"1453981.53582764"	"HCD"	"MS2"	"0"	"104.3"	"100.000"	"76.3821"	"25626"	"25626"	"25599"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.2"	""	"109.1"	""	"116.3"	""	"182.7"	""	"224.7"	"220.3"	""	"1318"	"72"	"38.000"	"31.000"	"4.5486803073072E-06"	"17"	"0"	"4.161E-06"	"1.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9565"	"0.0000"	"1"	"1"	"1"	"617.06592"	"2465.24184"	"2465.24228"	"-0.18"	"-0.00011"	"11/166"	"11"	"166"	"329471.775939941"	"HCD"	"MS2"	"17.6229"	"14.2"	"100.000"	"81.3475"	"27595"	"27595"	"27568"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.4"	""	"13.2"	""	"18.4"	""	"21.1"	""	"21.5"	"48.1"	""	"1321"	"23"	"38.000"	"31.000"	"0.337188552483756"	"15"	"0"	"3.336E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41882"	"2465.24192"	"2465.24228"	"-0.15"	"-0.00012"	"6/166"	"6"	"166"	"73237.6490478516"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"92.2170"	"31818"	"31818"	"31809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.0"	""	"4.3"	""	"3.8"	""	"2.2"	""	"5.4"	"6.2"	""	"1321"	"7"	"38.000"	"31.000"	"14.3176856123341"	"13"	"0.0006037"	"0.006141"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"822.41882"	"2465.24192"	"2465.24228"	"-0.15"	"-0.00012"	"14/166"	"14"	"166"	"268897.836608887"	"HCD"	"MS2"	"15.21114"	"11.2"	"100.000"	"83.1457"	"28328"	"28328"	"28303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.4"	""	"14.0"	""	"12.2"	""	"20.0"	""	"21.1"	"28.7"	""	"1321"	"48"	"38.000"	"31.000"	"0.00103961568197994"	"21"	"0"	"5.74E-05"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"822.41882"	"2465.24192"	"2465.24228"	"-0.15"	"-0.00012"	"14/166"	"14"	"166"	"484073.350158691"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"80.7107"	"27335"	"27335"	"27312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.3"	""	"14.3"	""	"20.3"	""	"25.5"	"0.5"	"35.5"	"32.1"	""	"1321"	"49"	"38.000"	"31.000"	"0.000822001901075001"	"19"	"0"	"2.588E-06"	"1.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"822.41882"	"2465.24192"	"2465.24228"	"-0.15"	"-0.00012"	"16/166"	"16"	"166"	"1178575.80926514"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"75.9551"	"25457"	"25457"	"25439"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.2"	""	"34.2"	""	"34.8"	""	"43.5"	""	"67.7"	"65.0"	""	"1321"	"63"	"38.000"	"31.000"	"3.50649175414568E-05"	"19"	"0"	"2.191E-06"	"1.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"822.41888"	"2465.24210"	"2465.24228"	"-0.07"	"-0.00006"	"5/166"	"5"	"166"	"60856.4222412109"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"96.6574"	"33210"	"33210"	"33207"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"3.3"	""	"3.3"	""	"4.1"	""	"4.4"	"6.0"	""	"1320"	"2"	"38.000"	"31.000"	"45.0343538133502"	"13"	"0.001454"	"0.01971"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"822.41888"	"2465.24210"	"2465.24228"	"-0.07"	"-0.00006"	"4/166"	"4"	"166"	"75722.7124023438"	"HCD"	"MS2"	"9.774568"	"1.7"	"100.000"	"100.7837"	"34357"	"34357"	"34355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.6"	""	"2.1"	""	"3.2"	""	"4.6"	"4.3"	""	"1320"	"11"	"38.000"	"31.000"	"5.84176302488351"	"14"	"0.001217"	"0.01678"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"822.41888"	"2465.24210"	"2465.24228"	"-0.07"	"-0.00006"	"8/166"	"8"	"166"	"103259.121765137"	"HCD"	"MS2"	"8.938017"	"2.3"	"100.000"	"92.4832"	"31904"	"31904"	"31896"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"4.0"	""	"3.4"	""	"7.0"	"7.8"	""	"1320"	"14"	"38.000"	"31.000"	"2.85459128483106"	"15"	"0.0006737"	"0.006732"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9365"	"0.0000"	"1"	"1"	"1"	"822.41888"	"2465.24210"	"2465.24228"	"-0.07"	"-0.00006"	"17/166"	"17"	"166"	"2664373.28320313"	"HCD"	"MS2"	"3.468078"	"67.9"	"100.000"	"79.5593"	"26866"	"26866"	"26849"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.5"	""	"87.5"	""	"73.4"	""	"116.4"	""	"151.1"	"147.9"	""	"1320"	"63"	"38.000"	"31.000"	"3.40050905423959E-05"	"21"	"0"	"2.1E-07"	"1.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9254"	"0.0000"	"1"	"1"	"1"	"822.41888"	"2465.24210"	"2465.24228"	"-0.07"	"-0.00006"	"16/166"	"16"	"166"	"3362550.91119385"	"HCD"	"MS2"	"0"	"78.2"	"100.000"	"79.2453"	"26738"	"26738"	"26721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.6"	""	"87.4"	""	"98.1"	""	"128.7"	""	"176.9"	"178.5"	""	"1320"	"67"	"38.000"	"31.000"	"1.21211530660991E-05"	"22"	"0"	"2.837E-07"	"1.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9296"	"0.0000"	"1"	"1"	"1"	"822.41888"	"2465.24210"	"2465.24228"	"-0.07"	"-0.00006"	"21/166"	"21"	"166"	"4118182.72912598"	"HCD"	"MS2"	"1.52041"	"95.1"	"100.000"	"78.9315"	"26610"	"26610"	"26593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"98.7"	""	"113.3"	""	"124.5"	""	"156.7"	""	"207.6"	"204.1"	""	"1320"	"71"	"38.000"	"31.000"	"5.66948924193561E-06"	"22"	"0"	"1.766E-07"	"1.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9487"	"0.0000"	"1"	"1"	"1"	"617.06598"	"2465.24209"	"2465.24228"	"-0.08"	"-0.00005"	"12/166"	"12"	"166"	"1654438.48028564"	"HCD"	"MS2"	"6.298469"	"30.8"	"100.000"	"77.6497"	"26137"	"26137"	"26117"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"34.5"	""	"28.7"	""	"35.0"	""	"51.0"	"0.6"	"68.2"	"75.5"	""	"1320"	"39"	"38.000"	"31.000"	"0.00786219725298067"	"17"	"0"	"6.909E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9692"	"0.0000"	"1"	"1"	"1"	"617.06598"	"2465.24209"	"2465.24228"	"-0.08"	"-0.00005"	"15/166"	"15"	"166"	"14344247.3202515"	"HCD"	"MS2"	"1.814396"	"218.6"	"100.000"	"76.4469"	"25602"	"25602"	"25585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"270.0"	""	"227.0"	""	"258.3"	""	"372.7"	"3.2"	"490.7"	"456.2"	""	"1320"	"65"	"38.000"	"31.000"	"2.2158682540035E-05"	"18"	"0"	"2.67E-07"	"1.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"822.41895"	"2465.24228"	"2465.24228"	"0.00"	"0.00000"	"7/166"	"7"	"166"	"98603.5167236328"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"99.3363"	"33984"	"33984"	"33980"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.4"	""	"3.2"	""	"3.4"	""	"6.0"	""	"6.7"	"6.4"	""	"1315"	"6"	"38.000"	"31.000"	"17.8195099796823"	"14"	"0.0009404"	"0.01008"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"822.41895"	"2465.24228"	"2465.24228"	"0.00"	"0.00000"	"8/166"	"8"	"166"	"83196.0059814453"	"HCD"	"MS2"	"17.91011"	"2.4"	"100.000"	"91.0887"	"31459"	"31459"	"31447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.6"	""	"2.6"	""	"2.9"	""	"4.3"	""	"4.4"	"6.7"	""	"1315"	"15"	"38.000"	"31.000"	"2.28505026148908"	"18"	"0.0002277"	"0.001134"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"822.41895"	"2465.24228"	"2465.24228"	"0.00"	"0.00000"	"4/166"	"4"	"166"	"93236.1762084961"	"HCD"	"MS2"	"5.608548"	"3.2"	"100.000"	"87.6040"	"30130"	"30130"	"30121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.0"	""	"4.7"	""	"1.9"	""	"5.2"	""	"8.5"	"5.8"	""	"1315"	"7"	"38.000"	"31.000"	"13.0285401946685"	"15"	"0.0006037"	"0.004303"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41895"	"2465.24228"	"2465.24228"	"0.00"	"0.00000"	"3/166"	"3"	"166"	"133097.130554199"	"HCD"	"MS2"	"3.911882"	"1.5"	"100.000"	"102.0763"	"34637"	"34637"	"34632"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"2.4"	""	"4.4"	""	"3.5"	"4.1"	""	"1315"	"3"	"38.000"	"31.000"	"33.1051650278048"	"13"	"0.001966"	"0.0285"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"822.41895"	"2465.24228"	"2465.24228"	"0.00"	"0.00000"	"17/166"	"17"	"166"	"1013885.70178223"	"HCD"	"MS2"	"3.106704"	"28.2"	"100.000"	"76.0482"	"25443"	"25443"	"25425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.0"	""	"31.5"	""	"34.1"	""	"42.3"	"0.1"	"66.1"	"59.8"	""	"1315"	"69"	"38.000"	"31.000"	"7.95968272809443E-06"	"19"	"0"	"1.637E-06"	"1.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.8958"	"0.0000"	"1"	"1"	"1"	"617.06604"	"2465.24233"	"2465.24228"	"0.02"	"0.00001"	"12/166"	"12"	"166"	"1674079.68865967"	"HCD"	"MS2"	"3.640848"	"34.9"	"100.000"	"77.6619"	"26091"	"26091"	"26073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.2"	""	"44.2"	""	"42.5"	""	"53.2"	""	"67.6"	"87.6"	""	"1315"	"48"	"38.000"	"31.000"	"0.0011089086141931"	"21"	"0"	"3.293E-06"	"1.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"822.41901"	"2465.24247"	"2465.24228"	"0.07"	"0.00006"	"6/166"	"6"	"166"	"80377.2759399414"	"HCD"	"MS2"	"10.93386"	"3.6"	"100.000"	"87.9465"	"30310"	"30310"	"30295"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	"6.3"	""	"3.9"	""	"5.0"	""	"9.4"	"6.7"	""	"1315"	"9"	"38.000"	"31.000"	"7.49714235321469"	"14"	"0.0006037"	"0.006132"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"822.41901"	"2465.24247"	"2465.24228"	"0.07"	"0.00006"	"6/166"	"6"	"166"	"86572.6813354492"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"91.4911"	"31565"	"31565"	"31556"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	"3.4"	""	""	""	""	""	"4.8"	"6.6"	""	"1315"	"1"	"38.000"	"31.000"	"51.3920281516827"	"13"	"0.0008731"	"0.009166"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9800"	"0.0000"	"1"	"1"	"1"	"822.41901"	"2465.24247"	"2465.24228"	"0.07"	"0.00006"	"17/166"	"17"	"166"	"516833.741577148"	"HCD"	"MS2"	"9.277159"	"18.9"	"100.000"	"82.0775"	"27892"	"27892"	"27872"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.3"	""	"22.5"	""	"22.6"	""	"33.2"	""	"44.2"	"41.8"	""	"1315"	"50"	"38.000"	"31.000"	"0.000635178452935803"	"17"	"0"	"6.879E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"822.41901"	"2465.24247"	"2465.24228"	"0.07"	"0.00006"	"17/166"	"17"	"166"	"1959401.89746094"	"HCD"	"MS2"	"1.574742"	"49.9"	"100.000"	"78.8061"	"26609"	"26609"	"26591"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.4"	""	"68.1"	""	"55.3"	""	"77.3"	""	"112.0"	"109.0"	""	"1315"	"72"	"38.000"	"31.000"	"4.46576388445798E-06"	"21"	"0"	"7.753E-07"	"1.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9615"	"0.0000"	"1"	"1"	"1"	"617.06610"	"2465.24257"	"2465.24228"	"0.12"	"0.00007"	"11/166"	"11"	"166"	"1018472.59075928"	"HCD"	"MS2"	"44.72161"	"33.6"	"100.000"	"79.4254"	"26811"	"26811"	"26785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.9"	""	"28.3"	""	"36.0"	""	"48.9"	""	"52.3"	"127.0"	""	"1315"	"26"	"38.000"	"31.000"	"0.177376367683254"	"15"	"0"	"6.069E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9828"	"0.0000"	"1"	"1"	"1"	"617.06610"	"2465.24257"	"2465.24228"	"0.12"	"0.00007"	"14/166"	"14"	"166"	"5343253.13189697"	"HCD"	"MS2"	"1.600621"	"92.9"	"100.000"	"77.3439"	"25962"	"25962"	"25945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"125.4"	""	"105.0"	""	"122.4"	""	"145.3"	"1.9"	"184.3"	"197.1"	""	"1315"	"58"	"38.000"	"31.000"	"0.000116116986710115"	"18"	"0"	"1.839E-06"	"1.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"822.41907"	"2465.24265"	"2465.24228"	"0.15"	"0.00012"	"5/166"	"5"	"166"	"84932.1054077148"	"HCD"	"MS2"	"4.588091"	"1.6"	"100.000"	"98.2427"	"33682"	"33682"	"33674"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"2.8"	""	"5.6"	""	"3.6"	"3.0"	""	"1315"	"13"	"38.000"	"31.000"	"3.19077188856595"	"18"	"0.001158"	"0.01542"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"822.41907"	"2465.24265"	"2465.24228"	"0.15"	"0.00012"	"19/166"	"19"	"166"	"2635155.84667969"	"HCD"	"MS2"	"24.83218"	"63.4"	"100.000"	"76.2836"	"25586"	"25586"	"25567"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"87.2"	""	"76.6"	""	"78.8"	""	"107.6"	""	"134.9"	"121.2"	""	"1315"	"65"	"38.000"	"31.000"	"2.32753251762358E-05"	"20"	"0"	"5.673E-07"	"1.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"822.41913"	"2465.24283"	"2465.24228"	"0.22"	"0.00018"	"7/166"	"7"	"166"	"68577.4855957031"	"HCD"	"MS2"	"10.18746"	"2.5"	"100.000"	"89.8233"	"30969"	"30969"	"30957"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	"2.1"	""	"4.0"	""	"3.8"	""	"5.8"	"4.6"	""	"1320"	"13"	"38.000"	"31.000"	"2.95490780756399"	"14"	"0.0006037"	"0.004146"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"822.41913"	"2465.24283"	"2465.24228"	"0.22"	"0.00018"	"5/166"	"5"	"166"	"66905.0252075195"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"99.0546"	"33907"	"33907"	"33903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.3"	""	"3.2"	""	"2.7"	""	"2.8"	""	"3.9"	"4.4"	""	"1320"	"7"	"38.000"	"31.000"	"14.0134134492014"	"15"	"0.001454"	"0.02013"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41913"	"2465.24283"	"2465.24228"	"0.22"	"0.00018"	"5/166"	"5"	"166"	"67608.5952148438"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"93.1475"	"32115"	"32115"	"32110"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.4"	""	"3.1"	""	"3.7"	""	"5.0"	""	"5.5"	"6.6"	""	"1320"	"5"	"38.000"	"31.000"	"20.4900932816472"	"13"	"0.0007793"	"0.007306"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"822.41913"	"2465.24283"	"2465.24228"	"0.22"	"0.00018"	"8/166"	"8"	"166"	"87516.1737670898"	"HCD"	"MS2"	"5.489458"	"2.5"	"100.000"	"92.3623"	"31890"	"31890"	"31882"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.5"	""	"2.8"	""	"4.9"	""	"4.2"	""	"3.6"	"5.5"	""	"1320"	"17"	"38.000"	"31.000"	"1.34754704348189"	"16"	"0.0004166"	"0.002158"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"822.41913"	"2465.24283"	"2465.24228"	"0.22"	"0.00018"	"16/166"	"16"	"166"	"1419653.08300781"	"HCD"	"MS2"	"4.596752"	"44.8"	"100.000"	"73.2099"	"24337"	"24337"	"24319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.3"	""	"49.4"	""	"52.8"	""	"75.4"	"0.1"	"98.1"	"94.8"	""	"1320"	"70"	"38.000"	"31.000"	"7.32055378073185E-06"	"22"	"0"	"1.934E-07"	"1.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"822.41919"	"2465.24302"	"2465.24228"	"0.30"	"0.00024"	"7/166"	"7"	"166"	"68430.4815063477"	"HCD"	"MS2"	"7.734801"	"2.1"	"100.000"	"93.6803"	"32282"	"32282"	"32276"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	""	""	"3.3"	""	"2.8"	""	"4.4"	"7.0"	""	"1322"	"8"	"38.000"	"31.000"	"9.84467672366915"	"16"	"0.0005564"	"0.003539"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.1000"	"0.0000"	"1"	"1"	"1"	"822.41919"	"2465.24302"	"2465.24228"	"0.30"	"0.00024"	"5/166"	"5"	"166"	"76339.3859863281"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"93.9606"	"32381"	"32381"	"32371"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.8"	""	"2.1"	""	"2.0"	""	"5.1"	""	"7.5"	"6.6"	""	"1322"	"10"	"38.000"	"31.000"	"6.28349768606802"	"22"	"0.0007076"	"0.006802"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41919"	"2465.24302"	"2465.24228"	"0.30"	"0.00024"	"6/166"	"6"	"166"	"74369.3151245117"	"HCD"	"MS2"	"0"	"0.8"	"100.000"	"106.7052"	"35529"	"35529"	"35525"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	"2.0"	""	"4.0"	"2.2"	""	"1322"	"8"	"38.000"	"31.000"	"9.95867270749436"	"13"	"0.0006037"	"0.005724"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41919"	"2465.24302"	"2465.24228"	"0.30"	"0.00024"	"5/166"	"5"	"166"	"68830.450012207"	"HCD"	"MS2"	"3.621745"	"1.1"	"100.000"	"103.1880"	"34873"	"34873"	"34869"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"2.1"	""	""	""	"5.4"	"3.0"	""	"1322"	"4"	"38.000"	"31.000"	"23.8891919204784"	"13"	"0.0007076"	"0.006888"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"822.41919"	"2465.24302"	"2465.24228"	"0.30"	"0.00024"	"5/166"	"5"	"166"	"85401.3355712891"	"HCD"	"MS2"	"0"	"2.4"	"100.000"	"93.7776"	"32340"	"32340"	"32333"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.2"	""	"4.8"	""	"6.8"	""	"4.9"	"3.9"	""	"1322"	"8"	"38.000"	"31.000"	"11.0459089605938"	"15"	"0.0008731"	"0.009242"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"822.41919"	"2465.24302"	"2465.24228"	"0.30"	"0.00024"	"7/166"	"7"	"166"	"105109.280578613"	"HCD"	"MS2"	"4.755252"	"3.0"	"100.000"	"97.4232"	"33444"	"33444"	"33437"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.0"	""	"4.9"	""	"5.3"	""	"5.6"	""	"5.0"	"5.1"	""	"1322"	"15"	"38.000"	"31.000"	"2.0146585881441"	"18"	"0.0006037"	"0.004528"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8551"	"0.0000"	"1"	"1"	"1"	"822.41919"	"2465.24302"	"2465.24228"	"0.30"	"0.00024"	"15/166"	"15"	"166"	"468431.544006348"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"81.0452"	"27522"	"27522"	"27502"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.3"	""	"17.0"	""	"23.3"	""	"30.9"	""	"34.3"	"30.5"	""	"1322"	"69"	"38.000"	"31.000"	"7.94696791282109E-06"	"27"	"0"	"3.179E-06"	"1.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41925"	"2465.24320"	"2465.24228"	"0.37"	"0.00031"	"8/166"	"8"	"166"	"98190.5245361328"	"HCD"	"MS2"	"16.21972"	"3.2"	"100.000"	"92.8857"	"32032"	"32032"	"32025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.2"	""	"3.0"	""	"5.2"	""	"5.1"	""	"4.3"	"8.2"	""	"1322"	"14"	"38.000"	"31.000"	"2.52465163025271"	"13"	"0.0006037"	"0.004126"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"822.41925"	"2465.24320"	"2465.24228"	"0.37"	"0.00031"	"6/166"	"6"	"166"	"134062.470031738"	"HCD"	"MS2"	"36.74255"	"2.3"	"100.000"	"95.8585"	"32976"	"32976"	"32970"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	"4.1"	""	"3.1"	""	"4.5"	""	"4.0"	"3.1"	""	"1322"	"9"	"38.000"	"31.000"	"8.47620515135629"	"16"	"0.000523"	"0.003187"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"822.41925"	"2465.24320"	"2465.24228"	"0.37"	"0.00031"	"14/166"	"14"	"166"	"209084.051452637"	"HCD"	"MS2"	"10.90088"	"9.7"	"100.000"	"84.5414"	"28897"	"28897"	"28876"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.4"	""	"10.1"	""	"13.2"	""	"12.5"	""	"24.1"	"20.5"	""	"1322"	"44"	"38.000"	"31.000"	"0.00295257854411787"	"18"	"0"	"2.001E-05"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"822.41925"	"2465.24320"	"2465.24228"	"0.37"	"0.00031"	"15/166"	"15"	"166"	"418489.287841797"	"HCD"	"MS2"	"28.14373"	"16.0"	"100.000"	"81.6752"	"27779"	"27779"	"27758"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.7"	""	"18.6"	""	"23.8"	""	"26.9"	""	"31.7"	"33.5"	""	"1322"	"36"	"38.000"	"31.000"	"0.0149005211923276"	"17"	"0"	"1.216E-05"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"822.41925"	"2465.24320"	"2465.24228"	"0.37"	"0.00031"	"15/166"	"15"	"166"	"3161256.8293457"	"HCD"	"MS2"	"0.5149921"	"81.8"	"100.000"	"74.7879"	"24930"	"24930"	"24913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"106.0"	""	"87.1"	""	"98.8"	""	"126.9"	""	"178.7"	"186.3"	""	"1322"	"65"	"38.000"	"31.000"	"2.18877671299993E-05"	"21"	"0"	"4.59E-07"	"1.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9242"	"0.0000"	"1"	"1"	"1"	"822.41925"	"2465.24320"	"2465.24228"	"0.37"	"0.00031"	"18/166"	"18"	"166"	"3261731.32897949"	"HCD"	"MS2"	"22.61453"	"80.7"	"100.000"	"74.4858"	"24806"	"24806"	"24785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"116.9"	""	"94.3"	""	"95.5"	""	"130.4"	""	"161.9"	"173.2"	""	"1322"	"66"	"38.000"	"31.000"	"1.84587147905788E-05"	"22"	"0"	"2.21E-07"	"1.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9877"	"0.0000"	"1"	"1"	"1"	"1233.12524"	"2465.24321"	"2465.24228"	"0.38"	"0.00046"	"22/166"	"22"	"166"	"2775922.74127197"	"HCD"	"MS2"	"0"	"207.4"	"100.000"	"76.4632"	"25608"	"25608"	"25585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.3"	""	"231.8"	""	"233.7"	""	"352.8"	"1.8"	"463.2"	"422.8"	""	"1322"	"81"	"38.000"	"31.000"	"4.95680072368753E-07"	"19"	"0"	"2.377E-07"	"1.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"822.41931"	"2465.24338"	"2465.24228"	"0.45"	"0.00037"	"8/166"	"8"	"166"	"93584.0036010742"	"HCD"	"MS2"	"5.323633"	"4.3"	"100.000"	"88.1918"	"30357"	"30357"	"30342"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.5"	""	"6.3"	""	"5.6"	""	"6.8"	""	"9.0"	"8.7"	""	"1321"	"15"	"38.000"	"31.000"	"2.15711263149828"	"16"	"0.000523"	"0.002859"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41931"	"2465.24338"	"2465.24228"	"0.45"	"0.00037"	"4/166"	"4"	"166"	"142896.786254883"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"98.9342"	"33868"	"33868"	"33862"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"4.1"	""	""	""	"7.1"	"7.2"	""	"1321"	"4"	"38.000"	"31.000"	"23.7067937833026"	"13"	"0.00862"	"0.3684"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"822.41937"	"2465.24356"	"2465.24228"	"0.52"	"0.00043"	"5/166"	"5"	"166"	"77410.6973266602"	"HCD"	"MS2"	"14.17515"	"2.8"	"100.000"	"92.6254"	"31976"	"31976"	"31970"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.6"	""	"3.4"	""	"2.1"	""	"4.5"	""	"4.4"	"10.0"	""	"1320"	"9"	"38.000"	"31.000"	"7.71869598073114"	"16"	"0.0008125"	"0.007635"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"822.41937"	"2465.24356"	"2465.24228"	"0.52"	"0.00043"	"5/166"	"5"	"166"	"111784.653137207"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"94.5227"	"32576"	"32576"	"32569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	"1.9"	""	"2.7"	""	"5.7"	""	"6.9"	"5.3"	""	"1320"	"9"	"38.000"	"31.000"	"8.06387775708814"	"17"	"0.001718"	"0.02368"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41937"	"2465.24356"	"2465.24228"	"0.52"	"0.00043"	"13/166"	"13"	"166"	"301243.262756348"	"HCD"	"MS2"	"14.94014"	"9.3"	"100.000"	"84.2143"	"28764"	"28764"	"28740"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.5"	""	"8.7"	""	"15.5"	""	"17.4"	""	"17.1"	"17.9"	""	"1320"	"22"	"38.000"	"31.000"	"0.402294352178512"	"14"	"0"	"6.36E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"822.41937"	"2465.24356"	"2465.24228"	"0.52"	"0.00043"	"19/166"	"19"	"166"	"1762883.91986084"	"HCD"	"MS2"	"0.5344415"	"44.7"	"100.000"	"81.3267"	"27586"	"27586"	"27568"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.9"	""	"55.7"	""	"64.3"	""	"72.7"	""	"93.8"	"82.9"	""	"1320"	"65"	"38.000"	"31.000"	"2.16542893454658E-05"	"22"	"0"	"9.64E-07"	"1.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"822.41937"	"2465.24356"	"2465.24228"	"0.52"	"0.00043"	"18/166"	"18"	"166"	"2983787.17669678"	"HCD"	"MS2"	"1.357633"	"72.0"	"100.000"	"73.0275"	"24211"	"24211"	"24193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.4"	""	"84.8"	""	"84.4"	""	"124.0"	""	"158.2"	"152.4"	""	"1320"	"86"	"38.000"	"31.000"	"1.77641297059176E-07"	"20"	"0"	"2.612E-07"	"1.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"822.41937"	"2465.24356"	"2465.24228"	"0.52"	"0.00043"	"17/166"	"17"	"166"	"6910556.49560547"	"HCD"	"MS2"	"0"	"122.1"	"81.153"	"79.1153"	"26736"	"26736"	"26719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"118.4"	""	"132.0"	""	"156.6"	""	"203.5"	""	"267.2"	"286.9"	""	"1320"	"80"	"38.000"	"31.000"	"6.28845468255611E-07"	"22"	"0"	"1.251E-07"	"1.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"822.41943"	"2465.24375"	"2465.24228"	"0.59"	"0.00049"	"5/166"	"5"	"166"	"63023.659362793"	"HCD"	"MS2"	"4.047215"	"2.6"	"100.000"	"94.8873"	"32716"	"32716"	"32706"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.6"	""	"4.5"	""	"2.9"	""	"3.8"	""	"6.1"	"5.2"	""	"1319"	"9"	"38.000"	"31.000"	"8.0392364049095"	"17"	"0.0006037"	"0.005417"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"822.41943"	"2465.24375"	"2465.24228"	"0.59"	"0.00049"	"4/166"	"4"	"166"	"84485.0981445313"	"HCD"	"MS2"	"24.91406"	"2.0"	"100.000"	"99.7580"	"34095"	"34095"	"34087"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.3"	""	""	""	"3.2"	""	"3.1"	""	"5.4"	"5.1"	""	"1319"	"4"	"38.000"	"31.000"	"29.121571002951"	"16"	"0.002165"	"0.03237"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"822.41943"	"2465.24375"	"2465.24228"	"0.59"	"0.00049"	"12/166"	"12"	"166"	"200310.529418945"	"HCD"	"MS2"	"12.12521"	"7.0"	"100.000"	"83.6308"	"28577"	"28577"	"28555"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.2"	""	"10.0"	""	"7.0"	""	"13.8"	""	"17.7"	"12.5"	""	"1319"	"43"	"38.000"	"31.000"	"0.0030989516462514"	"21"	"0"	"3.41E-05"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9153"	"0.0000"	"1"	"1"	"1"	"822.41943"	"2465.24375"	"2465.24228"	"0.59"	"0.00049"	"15/166"	"15"	"166"	"807039.569274902"	"HCD"	"MS2"	"22.91067"	"25.2"	"100.000"	"80.0397"	"27061"	"27061"	"27041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.2"	""	"31.4"	""	"32.6"	""	"42.8"	"0.3"	"49.8"	"53.4"	""	"1319"	"59"	"38.000"	"31.000"	"7.76631139536973E-05"	"21"	"0"	"3.637E-06"	"1.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"822.41949"	"2465.24393"	"2465.24228"	"0.67"	"0.00055"	"5/166"	"5"	"166"	"70720.0471191406"	"HCD"	"MS2"	"11.26464"	"2.4"	"100.000"	"89.5443"	"30860"	"30860"	"30850"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	"4.0"	""	""	""	"6.3"	""	"4.1"	"5.7"	""	"1319"	"7"	"38.000"	"31.000"	"14.3951037686046"	"15"	"0.001217"	"0.01685"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"3"	"3"	"5"	"822.41949"	"2465.24393"	"2465.24228"	"0.67"	"0.00055"	"3/166"	"3"	"166"	"71082.95703125"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"96.3910"	"33132"	"33132"	"33127"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	"3.5"	""	"3.5"	""	"5.3"	""	"6.0"	"3.7"	""	"1319"	"3"	"38.000"	"31.000"	"33.3591364591054"	"13"	"0.001058"	"0.01374"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9701"	"0.0000"	"1"	"1"	"1"	"822.41949"	"2465.24393"	"2465.24228"	"0.67"	"0.00055"	"17/166"	"17"	"166"	"854256.209838867"	"HCD"	"MS2"	"8.521895"	"28.9"	"100.000"	"75.1179"	"25064"	"25064"	"25041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.6"	""	"30.0"	""	"37.8"	""	"51.7"	"0.8"	"54.4"	"60.0"	""	"1319"	"67"	"38.000"	"31.000"	"1.26536203447206E-05"	"19"	"0"	"1.097E-06"	"1.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"822.41949"	"2465.24393"	"2465.24228"	"0.67"	"0.00055"	"15/166"	"15"	"166"	"1457370.73413086"	"HCD"	"MS2"	"15.15027"	"42.0"	"100.000"	"72.9195"	"24219"	"24219"	"24191"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.0"	""	"40.6"	""	"55.9"	""	"71.8"	"0.6"	"97.8"	"80.6"	""	"1319"	"64"	"38.000"	"31.000"	"2.85900424296575E-05"	"19"	"0"	"3.27E-06"	"1.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9452"	"0.0000"	"1"	"1"	"1"	"822.41949"	"2465.24393"	"2465.24228"	"0.67"	"0.00055"	"19/166"	"19"	"166"	"5944774.67510986"	"HCD"	"MS2"	"0.6024932"	"134.5"	"100.000"	"77.7967"	"26198"	"26198"	"26181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.4"	""	"82.8"	""	"132.2"	""	"144.2"	""	"570.0"	"271.0"	""	"1319"	"73"	"38.000"	"31.000"	"3.16384209375897E-06"	"21"	"0"	"1.897E-07"	"1.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"1233.12561"	"2465.24394"	"2465.24228"	"0.67"	"0.00083"	"5/166"	"5"	"166"	"250366.549438477"	"HCD"	"MS2"	"0"	"21.1"	"100.000"	"78.9636"	"26623"	"26623"	"26593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.3"	""	"18.2"	""	"26.7"	""	"38.3"	""	"51.0"	"49.3"	""	"1319"	"20"	"38.000"	"31.000"	"0.60008780330097"	"15"	"0.0001889"	"0.0005053"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41956"	"2465.24411"	"2465.24228"	"0.74"	"0.00061"	"4/166"	"4"	"166"	"132105.130615234"	"HCD"	"MS2"	"8.819298"	"1.5"	"100.000"	"97.9735"	"33604"	"33604"	"33600"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.3"	""	""	""	"3.4"	""	"3.2"	""	"5.9"	""	""	"1326"	"5"	"38.000"	"31.000"	"21.4049160269548"	"13"	"0.003914"	"0.09945"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41962"	"2465.24430"	"2465.24228"	"0.82"	"0.00067"	"5/166"	"5"	"166"	"105552.510192871"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"98.1879"	"33661"	"33661"	"33658"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	"2.8"	""	"2.5"	""	"2.1"	""	"3.4"	"2.8"	""	"1325"	"1"	"38.000"	"31.000"	"54.9776133478304"	"13"	"0.003286"	"0.0711"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9315"	"0.0000"	"1"	"1"	"1"	"822.41962"	"2465.24430"	"2465.24228"	"0.82"	"0.00067"	"20/166"	"20"	"166"	"2458084.54199219"	"HCD"	"MS2"	"0.7031585"	"56.7"	"100.000"	"78.3040"	"26354"	"26354"	"26337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.4"	""	"55.6"	""	"74.2"	""	"94.9"	"1.3"	"130.6"	"119.5"	""	"1325"	"73"	"38.000"	"31.000"	"3.64910098868579E-06"	"22"	"0"	"2.784E-07"	"1.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"3"	"3"	"3"	"822.41968"	"2465.24448"	"2465.24228"	"0.89"	"0.00073"	"3/166"	"3"	"166"	"58738.079284668"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"90.6578"	"31278"	"31278"	"31268"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	""	""	"4.2"	""	"3.3"	""	"4.1"	"4.5"	""	"1327"	"1"	"38.000"	"31.000"	"58.8628013987187"	"13"	"0.002829"	"0.04576"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"822.41968"	"2465.24448"	"2465.24228"	"0.89"	"0.00073"	"13/166"	"13"	"166"	"277999.445129395"	"HCD"	"MS2"	"33.62097"	"10.6"	"100.000"	"84.6744"	"29002"	"29002"	"28984"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.2"	""	"10.6"	""	"13.6"	""	"12.4"	""	"29.0"	"21.8"	""	"1327"	"33"	"38.000"	"31.000"	"0.0372255332097544"	"18"	"0"	"7.039E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9104"	"0.0000"	"1"	"1"	"1"	"822.41968"	"2465.24448"	"2465.24228"	"0.89"	"0.00073"	"15/166"	"15"	"166"	"450929.41015625"	"HCD"	"MS2"	"1.731804"	"14.9"	"100.000"	"81.0223"	"27462"	"27462"	"27440"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.7"	""	"15.9"	""	"17.5"	""	"20.6"	""	"42.8"	"32.5"	""	"1327"	"67"	"38.000"	"31.000"	"1.320811760418E-05"	"22"	"0"	"2.653E-06"	"1.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41974"	"2465.24466"	"2465.24228"	"0.97"	"0.00079"	"5/166"	"5"	"166"	"91152.0638427734"	"HCD"	"MS2"	"6.272974"	"2.5"	"100.000"	"94.6198"	"32631"	"32631"	"32626"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	""	""	"2.2"	""	"7.5"	""	"4.7"	"6.4"	""	"1327"	"5"	"38.000"	"31.000"	"22.5860833866614"	"13"	"0.0006037"	"0.005273"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"822.41974"	"2465.24466"	"2465.24228"	"0.97"	"0.00079"	"7/166"	"7"	"166"	"104139.556091309"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"90.9440"	"31380"	"31380"	"31366"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	"4.5"	""	"3.0"	""	"5.1"	""	"5.2"	"9.0"	""	"1327"	"8"	"38.000"	"31.000"	"9.48071141472117"	"15"	"0.0006037"	"0.00461"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"822.41974"	"2465.24466"	"2465.24228"	"0.97"	"0.00079"	"5/166"	"5"	"166"	"96775.3089599609"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"99.4879"	"34027"	"34027"	"34020"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1.8"	""	""	""	""	""	"5.5"	""	"4.2"	"5.3"	""	"1327"	"6"	"38.000"	"31.000"	"18.1067675889313"	"14"	"0.0009727"	"0.01076"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"822.41980"	"2465.24485"	"2465.24228"	"1.04"	"0.00085"	"4/166"	"4"	"166"	"101837.450256348"	"HCD"	"MS2"	"16.07856"	"2.8"	"100.000"	"97.7168"	"33535"	"33535"	"33529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.0"	""	"3.9"	""	"3.0"	""	"5.3"	"1.8"	"4.9"	"4.4"	""	"1331"	"13"	"38.000"	"31.000"	"3.06300749718393"	"17"	"0.001217"	"0.01739"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41980"	"2465.24485"	"2465.24228"	"1.04"	"0.00085"	"6/166"	"6"	"166"	"122072.865600586"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"100.9075"	"34376"	"34376"	"34372"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	""	""	"2.9"	""	"2.7"	""	"4.8"	"5.7"	""	"1331"	"8"	"38.000"	"31.000"	"11.275818061977"	"13"	"0.00119"	"0.0162"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.6458"	"0.0000"	"1"	"1"	"1"	"822.41980"	"2465.24485"	"2465.24228"	"1.04"	"0.00085"	"13/166"	"13"	"166"	"196194.896789551"	"HCD"	"MS2"	"12.26813"	"7.9"	"100.000"	"85.4047"	"29249"	"29249"	"29227"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"9.0"	""	"10.1"	""	"14.4"	""	"17.5"	"13.9"	""	"1331"	"48"	"38.000"	"31.000"	"0.000973078909600946"	""	"0"	"8.394E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"822.41986"	"2465.24503"	"2465.24228"	"1.11"	"0.00092"	"5/166"	"5"	"166"	"60882.9358520508"	"HCD"	"MS2"	"12.18925"	"2.0"	"100.000"	"96.8213"	"33268"	"33268"	"33263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.4"	""	""	""	"3.4"	""	"5.0"	""	"4.4"	"4.5"	""	"1330"	"5"	"38.000"	"31.000"	"20.0826789406734"	"13"	"0.002953"	"0.05156"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"822.41986"	"2465.24503"	"2465.24228"	"1.11"	"0.00092"	"6/166"	"6"	"166"	"74336.65625"	"HCD"	"MS2"	"25.40086"	"2.0"	"100.000"	"91.3560"	"31553"	"31553"	"31545"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	""	""	"2.9"	""	"2.6"	""	"5.9"	"5.1"	""	"1330"	"9"	"38.000"	"31.000"	"7.72363328203828"	"14"	"0.0007793"	"0.007433"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"822.41992"	"2465.24521"	"2465.24228"	"1.19"	"0.00098"	"11/166"	"11"	"166"	"134470.367248535"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"87.0340"	"29955"	"29955"	"29933"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"4.8"	""	"4.7"	""	"8.7"	""	"10.8"	"9.8"	""	"1328"	"32"	"38.000"	"31.000"	"0.0388300615871936"	"17"	"0.0001889"	"0.0007159"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"822.41992"	"2465.24521"	"2465.24228"	"1.19"	"0.00098"	"8/166"	"8"	"166"	"128918.395996094"	"HCD"	"MS2"	"0"	"2.3"	"100.000"	"99.2165"	"33945"	"33945"	"33941"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.7"	""	""	""	"3.8"	""	"6.4"	""	"5.6"	"4.1"	""	"1328"	"4"	"38.000"	"31.000"	"28.0651959872361"	"16"	"0.0006037"	"0.004523"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.41998"	"2465.24540"	"2465.24228"	"1.26"	"0.00104"	"7/166"	"7"	"166"	"110043.477111816"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"93.4077"	"32197"	"32197"	"32189"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"4.0"	""	"5.0"	""	"5.1"	"4.1"	""	"1330"	"12"	"38.000"	"31.000"	"3.942953408457"	"13"	"0.0008453"	"0.008117"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"3"	"822.41998"	"2465.24540"	"2465.24228"	"1.26"	"0.00104"	"7/166"	"7"	"166"	"102775.747558594"	"HCD"	"MS2"	"33.17986"	"4.0"	"100.000"	"94.7995"	"32672"	"32672"	"32664"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.4"	""	"4.4"	""	"5.8"	""	"9.8"	""	"5.6"	"9.4"	""	"1330"	"11"	"38.000"	"31.000"	"5.25801287619884"	"15"	"0.0006037"	"0.004848"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"3"	"3"	"7"	"822.42004"	"2465.24558"	"2465.24228"	"1.34"	"0.00110"	"3/166"	"3"	"166"	"60086.2011108398"	"HCD"	"MS2"	"4.230423"	"2.0"	"100.000"	"101.4049"	"34484"	"34484"	"34481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.0"	""	"3.2"	""	"2.1"	""	"4.0"	""	"3.8"	"3.7"	""	"1331"	"4"	"38.000"	"31.000"	"25.011979255396"	"14"	"0.001846"	"0.0256"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"822.42010"	"2465.24576"	"2465.24228"	"1.41"	"0.00116"	"5/166"	"5"	"166"	"79584.7731323242"	"HCD"	"MS2"	"3.235753"	"3.0"	"100.000"	"90.3886"	"31181"	"31181"	"31165"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.4"	""	"2.7"	""	"2.9"	""	"5.9"	""	"7.1"	"7.6"	""	"1329"	"4"	"38.000"	"31.000"	"23.9053433210991"	"14"	"0.002711"	"0.04206"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"822.42017"	"2465.24594"	"2465.24228"	"1.49"	"0.00122"	"11/166"	"11"	"166"	"188501.951782227"	"HCD"	"MS2"	"32.03192"	"7.6"	"100.000"	"86.7052"	"29770"	"29770"	"29747"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"9.4"	""	"8.6"	""	"15.5"	""	"17.7"	"15.3"	""	"1326"	"35"	"38.000"	"31.000"	"0.0229357807498719"	"17"	"0.0001889"	"0.00064"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"822.42023"	"2465.24613"	"2465.24228"	"1.56"	"0.00128"	"10/166"	"10"	"166"	"111413.649291992"	"HCD"	"MS2"	"41.19776"	"3.5"	"100.000"	"87.3254"	"30022"	"30022"	"29997"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"3.6"	""	"6.6"	""	"4.4"	""	"7.9"	"6.0"	""	"1326"	"23"	"38.000"	"31.000"	"0.368564522570278"	"16"	"0.0001889"	"0.0004003"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"822.42029"	"2465.24631"	"2465.24228"	"1.63"	"0.00134"	"12/166"	"12"	"166"	"167980.609924316"	"HCD"	"MS2"	"7.732112"	"6.9"	"100.000"	"86.0291"	"29497"	"29497"	"29480"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.2"	""	"5.8"	""	"10.6"	""	"11.1"	""	"13.2"	"12.8"	""	"1330"	"43"	"38.000"	"31.000"	"0.00308902658023128"	"26"	"0.0001308"	"0.0002416"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"822.42041"	"2465.24668"	"2465.24228"	"1.78"	"0.00146"	"12/166"	"12"	"166"	"162649.166320801"	"HCD"	"MS2"	"16.00333"	"8.5"	"100.000"	"86.3748"	"29636"	"29636"	"29617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.7"	""	"10.6"	""	"14.9"	""	"11.9"	""	"16.1"	"13.5"	""	"1331"	"35"	"38.000"	"31.000"	"0.0203773666512115"	"18"	"0.0001308"	"0.0002857"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"822.42047"	"2465.24686"	"2465.24228"	"1.86"	"0.00153"	"6/166"	"6"	"166"	"102475.051147461"	"HCD"	"MS2"	"9.459395"	"3.8"	"100.000"	"88.4608"	"30461"	"30461"	"30449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.1"	""	"4.6"	""	"7.0"	""	"3.9"	""	"7.1"	"6.3"	""	"1331"	"11"	"38.000"	"31.000"	"4.99054596310749"	"15"	"0.000523"	"0.003138"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"822.42090"	"2465.24814"	"2465.24228"	"2.38"	"0.00195"	"21/166"	"21"	"166"	"877643822.117188"	"HCD"	"MS2"	"0"	"132.6"	"0.754"	"76.5587"	"25698"	"25698"	"25692"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"164.8"	""	"135.6"	""	"156.8"	""	"229.1"	""	"295.1"	"289.2"	""	"1342"	"62"	"38.000"	"31.000"	"3.78200867059215E-05"	"20"	"0"	"2.299E-06"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"822.42114"	"2465.24887"	"2465.24228"	"2.67"	"0.00220"	"19/166"	"19"	"166"	"188974960.134766"	"HCD"	"MS2"	"0"	"113.3"	"2.721"	"76.9223"	"25790"	"25790"	"25773"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"129.3"	""	"116.3"	""	"134.0"	""	"193.1"	""	"258.0"	"247.3"	""	"1345"	"68"	"38.000"	"31.000"	"1.06338930640933E-05"	"21"	"0"	"3.251E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"822.42175"	"2465.25071"	"2465.24228"	"3.42"	"0.00281"	"19/166"	"19"	"166"	"177644912.888672"	"HCD"	"MS2"	"0"	"114.3"	"3.206"	"76.8611"	"25816"	"25816"	"25799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"129.7"	""	"122.1"	""	"130.6"	""	"184.5"	""	"270.7"	"252.7"	""	"1343"	"65"	"38.000"	"31.000"	"1.93662715434951E-05"	"21"	"0"	"1.329E-06"	"1.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9242"	"0.0000"	"1"	"1"	"1"	"822.42175"	"2465.25071"	"2465.24228"	"3.42"	"0.00281"	"22/166"	"22"	"166"	"846022186.296875"	"HCD"	"MS2"	"0"	"398.5"	"0.864"	"76.6107"	"25668"	"25668"	"25661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"419.8"	""	"426.5"	""	"477.0"	""	"689.7"	""	"934.4"	"854.7"	""	"1343"	"66"	"38.000"	"31.000"	"1.79906153011598E-05"	"22"	"0"	"3.027E-06"	"1.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"822.42175"	"2465.25071"	"2465.24228"	"3.42"	"0.00281"	"15/166"	"15"	"166"	"27499596.369873"	"HCD"	"MS2"	"0"	"398.5"	"100.000"	"76.6151"	"25669"	"25669"	"25661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"419.8"	""	"426.5"	""	"477.0"	""	"689.7"	""	"934.4"	"854.7"	""	"1343"	"8"	"38.000"	"31.000"	"9.70612806055891"	"14"	"0.0001859"	"0.0003236"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"822.42188"	"2465.25107"	"2465.24228"	"3.57"	"0.00293"	"18/166"	"18"	"166"	"17029326.0853271"	"HCD"	"MS2"	"0.1036254"	"145.5"	"38.523"	"77.5790"	"26058"	"26058"	"26041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"184.1"	"2.5"	"157.6"	""	"190.4"	""	"249.2"	""	"303.4"	"298.1"	""	"1341"	"67"	"38.000"	"31.000"	"1.50106252341007E-05"	"21"	"0"	"4.137E-07"	"1.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9306"	"0.0000"	"1"	"1"	"1"	"822.42188"	"2465.25107"	"2465.24228"	"3.57"	"0.00293"	"16/166"	"16"	"166"	"24457171.8411865"	"HCD"	"MS2"	"0"	"182.6"	"35.687"	"77.2655"	"25930"	"25930"	"25913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.8"	""	"187.6"	""	"226.9"	""	"331.4"	"1.8"	"386.2"	"358.9"	""	"1341"	"72"	"38.000"	"31.000"	"4.39945401056099E-06"	"22"	"0"	"4.694E-07"	"1.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"822.42230"	"2465.25235"	"2465.24228"	"4.09"	"0.00336"	"21/166"	"21"	"166"	"22014137.0826416"	"HCD"	"MS2"	"0"	"155.9"	"34.682"	"77.1697"	"25942"	"25942"	"25925"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"199.9"	""	"179.4"	""	"185.2"	""	"260.9"	""	"328.3"	"331.0"	""	"1342"	"64"	"38.000"	"31.000"	"2.63464751653131E-05"	"20"	"0"	"8.032E-07"	"1.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAIMGNPk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"822.42273"	"2465.25364"	"2465.24228"	"4.61"	"0.00378"	"18/166"	"18"	"166"	"28384454.5866699"	"HCD"	"MS2"	"0"	"142.4"	"22.929"	"77.4833"	"26070"	"26070"	"26053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"177.7"	""	"156.1"	""	"180.2"	""	"235.1"	""	"294.9"	"310.9"	""	"1352"	"70"	"38.000"	"31.000"	"7.44640573249996E-06"	"21"	"0"	"5.794E-07"	"1.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGGGDDSFNTFFSETGAGK"	"[K].tIGGGDDSFNTFFSETGAGk.[H]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"822.74414"	"2466.21787"	"2466.21890"	"-0.42"	"-0.00035"	"19/202"	"19"	"202"	"5126487.24060059"	"HCD"	"MS2"	"0.8686307"	"137.8"	"100.000"	"66.6552"	"21670"	"21670"	"21651"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"253.5"	""	"189.6"	""	"188.2"	""	"220.0"	""	"251.3"	"208.4"	""	"1228"	"78"	"37.000"	"30.000"	"1.02841492588023E-06"	"21"	"0"	"3.942E-07"	"1.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGGGDDSFNTFFSETGAGK"	"[K].tIGGGDDSFNTFFSETGAGk.[H]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"0"	"3"	"3"	"0.9839"	"0.0000"	"1"	"1"	"1"	"822.74469"	"2466.21952"	"2466.21890"	"0.25"	"0.00020"	"18/202"	"18"	"202"	"1218895.43023682"	"HCD"	"MS2"	"0"	"45.3"	"100.000"	"66.9946"	"21756"	"21756"	"21737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.9"	""	"52.0"	""	"61.9"	""	"78.9"	""	"87.1"	"75.2"	""	"1230"	"62"	"37.000"	"30.000"	"4.09142991064071E-05"	"17"	"0"	"1.648E-06"	"1.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGGGDDSFNTFFSETGAGK"	"[K].tIGGGDDSFNTFFSETGAGk.[H]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"822.74524"	"2466.22116"	"2466.21890"	"0.92"	"0.00075"	"18/202"	"18"	"202"	"1805936.02667236"	"HCD"	"MS2"	"0"	"66.5"	"100.000"	"66.6929"	"21633"	"21633"	"21609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.2"	""	"91.2"	""	"88.6"	""	"109.0"	""	"135.6"	"104.8"	""	"1238"	"56"	"37.000"	"30.000"	"0.000144108848849464"	"18"	"0"	"1.274E-06"	"1.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVIDPESGNTLYILTHK"	"[R].lPVIDPESGNTLYILTHk.[R]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P80385"	"5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Prkag1 PE=1 SV=3"	"P80385"	"5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Prkag1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.47577"	"2468.41275"	"2468.41648"	"-1.51"	"-0.00124"	"14/174"	"14"	"174"	"872006.194763184"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"73.8031"	"24579"	"24579"	"24559"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.3"	""	"26.2"	""	"29.2"	""	"40.0"	"0.4"	"39.6"	"43.3"	""	"833"	"52"	"36.000"	"29.000"	"0.000235838663884433"	"16"	"0"	"4.483E-06"	"1.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVIDPESGNTLYILTHK"	"[R].lPVIDPESGNTLYILTHk.[R]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P80385"	"5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Prkag1 PE=1 SV=3"	"P80385"	"5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Prkag1 PE=1 SV=3"	"0"	"3"	"3"	"0.9857"	"0.0000"	"1"	"1"	"1"	"823.47583"	"2468.41294"	"2468.41648"	"-1.44"	"-0.00118"	"18/174"	"18"	"174"	"793678.469970703"	"HCD"	"MS2"	"3.292041"	"22.8"	"100.000"	"73.7521"	"24507"	"24507"	"24481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.5"	""	"24.6"	""	"34.1"	""	"37.6"	"0.6"	"37.9"	"48.6"	""	"833"	"70"	"36.000"	"29.000"	"4.09840625549513E-06"	"18"	"0"	"1.564E-06"	"1.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSEQYETLLIETASSLVK"	"[R].tSEQYETLLIETASSLVk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"824.12720"	"2470.36704"	"2470.36926"	"-0.90"	"-0.00074"	"10/192"	"10"	"192"	"101658.773010254"	"HCD"	"MS2"	"5.685004"	"3.4"	"100.000"	"92.7627"	"32014"	"32014"	"32008"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.0"	""	"2.9"	""	"3.0"	""	"7.9"	""	"9.8"	"6.2"	""	"1163"	"48"	"37.000"	"30.000"	"0.000880135865965655"	"18"	"0.0001859"	"0.0003515"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSEQYETLLIETASSLVK"	"[R].tSEQYETLLIETASSLVk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"824.12781"	"2470.36887"	"2470.36926"	"-0.16"	"-0.00013"	"6/192"	"6"	"192"	"65543.8740844727"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"92.8199"	"32010"	"32010"	"32002"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"1.9"	""	""	""	""	""	"7.7"	""	"5.3"	"7.0"	""	"1164"	"14"	"37.000"	"30.000"	"2.34381313977417"	"14"	"0.0006037"	"0.005765"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSEQYETLLIETASSLVK"	"[R].tSEQYETLLIETASSLVk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"824.12854"	"2470.37107"	"2470.36926"	"0.73"	"0.00060"	"9/192"	"9"	"192"	"95156.7925415039"	"HCD"	"MS2"	"3.661547"	"3.2"	"100.000"	"92.5490"	"31920"	"31920"	"31914"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"3.7"	""	"2.5"	""	"12.8"	""	"6.0"	"5.2"	""	"1142"	"23"	"37.000"	"30.000"	"0.281602242058269"	"16"	"0.0001889"	"0.0004589"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IPEMAVPDVHLPDIQLPK"	"[K].iPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"0.0000"	"0.0000"	"1"	"1"	"1"	"618.35828"	"2470.41128"	"2470.41437"	"-1.25"	"-0.00077"	"8/162"	"8"	"162"	"1915439.43963623"	"HCD"	"MS2"	"12.17218"	"36.3"	"100.000"	"78.0724"	"26310"	"26310"	"26287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.3"	""	"42.8"	""	"44.1"	""	"44.6"	"0.2"	"73.5"	"88.1"	""	"754"	"37"	"35.000"	"28.000"	"0.00752213892743268"	"19"	"0"	"8.944E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IPEMAVPDVHLPEVKLPK"	"[K].iPEMAVPDVHLPEVKLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"1"	"4"	"4"	""	"0.0000"	"2"	"2"	"2"	"618.35828"	"2470.41128"	"2470.45076"	"-15.98"	"-0.00987"	"8/162"	"8"	"162"	"1915439.43963623"	"HCD"	"MS2"	"12.17218"	"36.3"	"100.000"	"78.0724"	"26310"	"26310"	"26287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.3"	""	"42.8"	""	"44.1"	""	"44.6"	"0.2"	"73.5"	"88.1"	""	"754"	"37"	"35.000"	"28.000"	"0.00752213892743268"	"19"	"0.0004166"	"0.002378"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IPEMAVPDVHLPDIQLPK"	"[K].iPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"0.0000"	"0.0000"	"1"	"1"	"1"	"618.35846"	"2470.41201"	"2470.41437"	"-0.96"	"-0.00059"	"8/162"	"8"	"162"	"1004251.96826172"	"HCD"	"MS2"	"9.829276"	"22.9"	"100.000"	"78.3797"	"26435"	"26435"	"26415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.5"	""	"24.9"	""	"25.9"	""	"30.4"	""	"44.8"	"63.2"	""	"751"	"38"	"35.000"	"28.000"	"0.00545267912404197"	"18"	"0.0001308"	"0.0002246"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IPEMAVPDVHLPEVKLPK"	"[K].iPEMAVPDVHLPEVKLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"1"	"4"	"4"	""	"0.0000"	"2"	"2"	"2"	"618.35846"	"2470.41201"	"2470.45076"	"-15.69"	"-0.00969"	"8/162"	"8"	"162"	"1004251.96826172"	"HCD"	"MS2"	"9.829276"	"22.9"	"100.000"	"78.3797"	"26435"	"26435"	"26415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.5"	""	"24.9"	""	"25.9"	""	"30.4"	""	"44.8"	"63.2"	""	"751"	"38"	"35.000"	"28.000"	"0.00545267912404197"	"18"	"0.001587"	"0.02111"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IPEMAVPDVHLPDIQLPK"	"[K].iPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"0.0000"	"0.0000"	"1"	"1"	"1"	"618.35907"	"2470.41445"	"2470.41437"	"0.03"	"0.00002"	"8/162"	"8"	"162"	"1552511.63470459"	"HCD"	"MS2"	"34.26343"	"32.1"	"100.000"	"78.0872"	"26265"	"26265"	"26241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.8"	""	"33.6"	""	"46.2"	""	"36.9"	"1.3"	"60.0"	"78.4"	""	"739"	"38"	"35.000"	"28.000"	"0.00557974616963652"	"20"	"0"	"0.0001339"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IPEMAVPDVHLPEVKLPK"	"[K].iPEMAVPDVHLPEVKLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"1"	"4"	"4"	""	"0.0000"	"2"	"2"	"2"	"618.35907"	"2470.41445"	"2470.45076"	"-14.70"	"-0.00908"	"8/162"	"8"	"162"	"1552511.63470459"	"HCD"	"MS2"	"34.26343"	"32.1"	"100.000"	"78.0872"	"26265"	"26265"	"26241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.8"	""	"33.6"	""	"46.2"	""	"36.9"	"1.3"	"60.0"	"78.4"	""	"739"	"38"	"35.000"	"28.000"	"0.00557974616963652"	"20"	"0.001912"	"0.02705"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IPEMAVPDVHLPDIQLPK"	"[K].iPEMAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"0.0000"	"0.0000"	"1"	"1"	"1"	"618.35931"	"2470.41543"	"2470.41437"	"0.43"	"0.00026"	"10/162"	"10"	"162"	"1186461.13995361"	"HCD"	"MS2"	"9.185014"	"25.4"	"100.000"	"78.3919"	"26389"	"26389"	"26369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.4"	""	"28.5"	""	"40.4"	""	"28.3"	""	"47.1"	"68.9"	""	"735"	"29"	"35.000"	"28.000"	"0.0439802145255412"	"21"	"0.0001308"	"0.0003126"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IPEMAVPDVHLPEVKLPK"	"[K].iPEMAVPDVHLPEVKLPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"1"	"4"	"4"	""	"0.0000"	"2"	"2"	"2"	"618.35931"	"2470.41543"	"2470.45076"	"-14.30"	"-0.00883"	"10/162"	"10"	"162"	"1186461.13995361"	"HCD"	"MS2"	"9.185014"	"25.4"	"100.000"	"78.3919"	"26389"	"26389"	"26369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.4"	""	"28.5"	""	"40.4"	""	"28.3"	""	"47.1"	"68.9"	""	"735"	"29"	"35.000"	"28.000"	"0.0439802145255412"	"21"	"0.001587"	"0.0217"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVHLPDIQLPK"	"[K].vPEmAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); M4(Oxidation); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"618.85345"	"2472.39199"	"2472.39364"	"-0.67"	"-0.00041"	"8/162"	"8"	"162"	"2423719.40789795"	"HCD"	"MS2"	"40.56504"	"59.9"	"100.000"	"66.7844"	"21723"	"21723"	"21699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.4"	""	"71.9"	""	"83.1"	""	"115.1"	"0.6"	"115.7"	"103.8"	""	"955"	"11"	"36.000"	"29.000"	"3.42746774082076"	"13"	"0.0001889"	"0.0004573"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVHLPDIQLPK"	"[K].vPEmAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); M4(Oxidation); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.80219"	"2472.39200"	"2472.39364"	"-0.66"	"-0.00055"	"14/162"	"14"	"162"	"745200.508728027"	"HCD"	"MS2"	"20.11274"	"26.9"	"100.000"	"66.7867"	"21724"	"21724"	"21699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.9"	""	"28.7"	""	"26.8"	""	"55.7"	"1.1"	"51.7"	"55.2"	""	"955"	"26"	"36.000"	"29.000"	"0.12358716669856"	"14"	"0.0001308"	"0.0002537"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVHLPDIQLPK"	"[K].vPEmAVPDVHLPDIQLPk.[V]"	"N-Term(TMT6plex); M4(Oxidation); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"824.80261"	"2472.39328"	"2472.39364"	"-0.14"	"-0.00012"	"14/162"	"14"	"162"	"727033.828063965"	"HCD"	"MS2"	"28.97578"	"28.6"	"100.000"	"66.8588"	"21701"	"21701"	"21673"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.5"	""	"31.2"	""	"29.8"	""	"64.6"	"0.2"	"60.0"	"56.2"	""	"938"	"39"	"36.000"	"29.000"	"0.00536009939016403"	"17"	"7.476E-05"	"0.0002045"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWQLGSSSPNFTLEGHEK"	"[K].vWQLGSSSPNFTLEGHEk.[G]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"3"	"3"	"0.8163"	"0.0000"	"1"	"1"	"1"	"825.44049"	"2474.30692"	"2474.30799"	"-0.43"	"-0.00036"	"16/188"	"16"	"188"	"1171548.38830566"	"HCD"	"MS2"	"73.16183"	"53.7"	"100.000"	"54.2014"	"16535"	"16535"	"16509"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"79.5"	""	"55.8"	""	"56.0"	""	"101.7"	""	"109.1"	"111.4"	""	"1503"	"49"	"38.000"	"31.000"	"0.000856897715352218"	"25"	"0"	"2.09E-06"	"1.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWQLGSSSPNFTLEGHEK"	"[K].vWQLGSSSPNFTLEGHEk.[G]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"825.44098"	"2474.30838"	"2474.30799"	"0.16"	"0.00013"	"17/188"	"17"	"188"	"1127683.88720703"	"HCD"	"MS2"	"55.02585"	"52.9"	"100.000"	"54.3435"	"16646"	"16646"	"16621"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.1"	""	"53.7"	""	"50.8"	""	"102.1"	""	"131.9"	"101.6"	""	"1528"	"57"	"38.000"	"31.000"	"0.000137433737915839"	"25"	"0"	"1.301E-06"	"1.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDKK"	"[R].iINEPTAAAIAYGLDkk.[VG]"	"N-Term(TMT6plex); K16(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.83002"	"2475.47550"	"2475.47897"	"-1.40"	"-0.00116"	"21/178"	"21"	"178"	"3971281.49243164"	"HCD"	"MS2"	"0"	"212.2"	"100.000"	"63.1855"	"20254"	"20254"	"20227"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"566.9"	""	"399.5"	""	"369.5"	""	"207.8"	""	"225.9"	"224.9"	""	"380"	"50"	"32.000"	"25.000"	"0.000212693197858759"	"16"	"0"	"3.608E-07"	"1.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDKK"	"[R].iINEPTAAAIAYGLDkk.[VG]"	"N-Term(TMT6plex); K16(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.83081"	"2475.47788"	"2475.47897"	"-0.44"	"-0.00036"	"15/178"	"15"	"178"	"1172457.32781982"	"HCD"	"MS2"	"36.48081"	"80.2"	"100.000"	"63.6737"	"20400"	"20400"	"20377"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"162.3"	""	"139.5"	""	"135.7"	""	"82.3"	"0.3"	"101.3"	"134.8"	""	"348"	"36"	"32.000"	"25.000"	"0.00437068239082667"	"15"	"0"	"0.0001139"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDKK"	"[R].iINEPTAAAIAYGLDkk.[VG]"	"N-Term(TMT6plex); K16(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.62543"	"2475.47988"	"2475.47897"	"0.37"	"0.00023"	"15/178"	"15"	"178"	"10902478.7380981"	"HCD"	"MS2"	"2.147014"	"262.6"	"94.307"	"63.2698"	"20235"	"20235"	"20217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"706.8"	""	"499.8"	""	"487.5"	""	"253.2"	"0.5"	"253.7"	"262.2"	""	"330"	"32"	"32.000"	"25.000"	"0.0112326944184467"	"14"	"0"	"4.194E-06"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDKK"	"[R].iINEPTAAAIAYGLDkk.[VG]"	"N-Term(TMT6plex); K16(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.83154"	"2475.48008"	"2475.47897"	"0.45"	"0.00037"	"19/178"	"19"	"178"	"8940305.22174072"	"HCD"	"MS2"	"23.11963"	"308.7"	"72.827"	"63.4736"	"20372"	"20372"	"20355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"705.3"	""	"564.4"	""	"559.6"	""	"288.9"	""	"384.6"	"407.9"	""	"330"	"44"	"32.000"	"25.000"	"0.00065687683141327"	"15"	"0"	"9.727E-07"	"1.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINEPTAAAIAYGLDKK"	"[R].iINEPTAAAIAYGLDkk.[VG]"	"N-Term(TMT6plex); K16(TMT6plex); K17(TMT6plex)"	"2"	"2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.83173"	"2475.48062"	"2475.47897"	"0.67"	"0.00055"	"24/178"	"24"	"178"	"7293311.62597656"	"HCD"	"MS2"	"16.0587"	"373.4"	"100.000"	"63.1937"	"20204"	"20204"	"20185"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"919.7"	""	"706.4"	""	"668.3"	""	"377.7"	""	"394.2"	"447.6"	""	"328"	"43"	"32.000"	"25.000"	"0.000922239773312174"	"15"	"0"	"1.705E-07"	"1.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGLDQVAGMSETALPGAFK"	"[R].iIGLDQVAGMSETALPGAFk.[T]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"4"	"4"	"0.9024"	"0.0000"	"1"	"1"	"1"	"619.85175"	"2476.38515"	"2476.38855"	"-1.37"	"-0.00085"	"16/196"	"16"	"196"	"1059551.85888672"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"83.5208"	"28481"	"28481"	"28460"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.0"	""	"32.1"	""	"48.2"	""	"33.4"	""	"37.9"	"61.7"	""	"1115"	"41"	"37.000"	"30.000"	"0.00398331701787098"	"19"	"0"	"3.868E-06"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGLDQVAGMSETALPGAFK"	"[R].iIGLDQVAGMSETALPGAFk.[T]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.9194"	"0.0000"	"1"	"1"	"1"	"826.13379"	"2476.38681"	"2476.38855"	"-0.70"	"-0.00058"	"17/196"	"17"	"196"	"1409447.24871826"	"HCD"	"MS2"	"14.83397"	"36.8"	"100.000"	"83.4769"	"28463"	"28463"	"28444"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.6"	""	"59.9"	""	"67.0"	""	"53.7"	"0.5"	"62.3"	"64.4"	""	"1094"	"62"	"37.000"	"30.000"	"3.60568120698644E-05"	"21"	"0"	"9.722E-07"	"1.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGLDQVAGMSETALPGAFK"	"[R].iIGLDQVAGMSETALPGAFk.[T]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.9839"	"0.0000"	"1"	"1"	"1"	"826.13409"	"2476.38773"	"2476.38855"	"-0.33"	"-0.00027"	"17/196"	"17"	"196"	"867821.770507813"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"83.7298"	"28617"	"28617"	"28603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"31.8"	""	"42.7"	""	"37.3"	""	"25.0"	""	"42.6"	"48.1"	""	"1089"	"62"	"37.000"	"30.000"	"3.14049339317081E-05"	"17"	"0"	"1.651E-06"	"1.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGLDQVAGMSETALPGAFK"	"[R].iIGLDQVAGMSETALPGAFk.[T]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"826.13428"	"2476.38828"	"2476.38855"	"-0.11"	"-0.00009"	"11/196"	"11"	"196"	"160726.019348145"	"HCD"	"MS2"	"60.70068"	"7.2"	"100.000"	"83.8570"	"28618"	"28618"	"28596"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.5"	""	"13.3"	""	"8.5"	""	"11.7"	""	"12.5"	"16.1"	""	"1083"	"39"	"37.000"	"30.000"	"0.00642093777132517"	"16"	"0"	"5.201E-05"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAImGnPKVK.[A]"	"N-Term(TMT6plex); M15(Oxidation); N17(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.42151"	"2480.24997"	"2480.22166"	"11.42"	"0.00944"	"7/186"	"7"	"186"	"1293891.80279541"	"HCD"	"MS2"	"11.09496"	"56.2"	"100.000"	"55.7658"	"17228"	"17228"	"17205"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.7"	""	"58.8"	""	"72.8"	""	"91.0"	"0.5"	"115.8"	"116.8"	""	"1365"	"37"	"38.000"	"31.000"	"0.012249057003132"	"15"	"0.002297"	"0.03411"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAImGnPKVK.[A]"	"N-Term(TMT6plex); M15(Oxidation); N17(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.42200"	"2480.25144"	"2480.22166"	"12.01"	"0.00993"	"9/186"	"9"	"186"	"2028629.60327148"	"HCD"	"MS2"	"6.238617"	"74.9"	"100.000"	"55.3818"	"17071"	"17071"	"17045"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.0"	""	"80.4"	""	"95.7"	""	"129.0"	""	"162.9"	"155.6"	""	"1370"	"35"	"38.000"	"31.000"	"0.0235879702572887"	"15"	"0.001058"	"0.01388"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAImGnPKVK.[A]"	"N-Term(TMT6plex); M15(Oxidation); N17(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"0.9841"	"0.0000"	"1"	"1"	"1"	"827.42218"	"2480.25199"	"2480.22166"	"12.23"	"0.01011"	"11/186"	"11"	"186"	"578049.920410156"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"56.6985"	"17555"	"17555"	"17531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"33.7"	""	"38.8"	""	"40.9"	""	"57.2"	"61.9"	""	"1352"	"63"	"38.000"	"31.000"	"3.58052488070761E-05"	"17"	"0.0001889"	"0.001025"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAImGnPKVK.[A]"	"N-Term(TMT6plex); M15(Oxidation); N17(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.42230"	"2480.25235"	"2480.22166"	"12.38"	"0.01023"	"14/186"	"14"	"186"	"14733488.5787964"	"HCD"	"MS2"	"0"	"327.7"	"87.431"	"54.9750"	"16904"	"16904"	"16885"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"440.5"	""	"348.0"	""	"368.7"	""	"554.0"	""	"674.5"	"731.7"	""	"1359"	"55"	"38.000"	"31.000"	"0.000214876767008442"	"16"	"0.0008731"	"0.009389"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAImGnPKVK.[A]"	"N-Term(TMT6plex); M15(Oxidation); N17(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"0.9796"	"0.0000"	"1"	"1"	"1"	"827.42255"	"2480.25309"	"2480.22166"	"12.67"	"0.01048"	"11/186"	"11"	"186"	"9436590.63928223"	"HCD"	"MS2"	"2.087487"	"253.2"	"100.000"	"54.7691"	"16766"	"16766"	"16752"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"345.7"	""	"257.3"	""	"283.8"	""	"480.1"	""	"520.0"	"522.8"	""	"1358"	"49"	"38.000"	"31.000"	"0.000895096325479801"	"16"	"0.002651"	"0.03902"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAImGnPKVK.[A]"	"N-Term(TMT6plex); M15(Oxidation); N17(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.42261"	"2480.25327"	"2480.22166"	"12.75"	"0.01054"	"12/186"	"12"	"186"	"5816689.96759033"	"HCD"	"MS2"	"0"	"137.7"	"79.415"	"55.0817"	"16894"	"16894"	"16875"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.3"	""	"145.2"	""	"159.6"	""	"229.3"	""	"304.6"	"302.1"	""	"1358"	"60"	"38.000"	"31.000"	"6.62017964010106E-05"	"16"	"0.0001889"	"0.0009175"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAImGnPKVK.[A]"	"N-Term(TMT6plex); M15(Oxidation); N17(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.42322"	"2480.25510"	"2480.22166"	"13.48"	"0.01115"	"8/186"	"8"	"186"	"1580232.44750977"	"HCD"	"MS2"	"10.69685"	"64.9"	"100.000"	"55.5344"	"17080"	"17080"	"17051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.2"	""	"75.2"	""	"83.9"	""	"116.2"	""	"122.9"	"133.7"	""	"1365"	"45"	"38.000"	"31.000"	"0.00229140921720816"	"15"	"0.001966"	"0.03094"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.74799"	"2481.22940"	"2481.23720"	"-3.14"	"-0.00260"	"14/166"	"14"	"166"	"1369859.06695557"	"HCD"	"MS2"	"0"	"42.2"	"100.000"	"67.4525"	"21987"	"21987"	"21965"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.2"	""	"40.7"	""	"55.5"	""	"76.2"	""	"91.5"	"85.3"	""	"1185"	"53"	"37.000"	"30.000"	"0.000321875821409267"	"16"	"0"	"9.562E-06"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"827.74829"	"2481.23032"	"2481.23720"	"-2.77"	"-0.00229"	"19/166"	"19"	"166"	"1611025.3550415"	"HCD"	"MS2"	"16.33009"	"47.2"	"100.000"	"64.7079"	"20823"	"20823"	"20793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.2"	""	"44.6"	""	"44.2"	""	"114.1"	""	"100.4"	"91.6"	""	"1203"	"104"	"37.000"	"30.000"	"2.68680180678804E-09"	"23"	"0"	"1.039E-07"	"1.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.11902"	"2481.23076"	"2481.23720"	"-2.59"	"-0.00322"	"4/166"	"4"	"166"	"84440.4996948242"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"71.4529"	"23620"	"23620"	"23594"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"5.6"	""	"4.4"	""	"10.8"	""	"13.9"	"12.8"	""	"1208"	"4"	"37.000"	"30.000"	"25.5880351493923"	"13"	"0.004039"	"0.1044"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9859"	"0.0000"	"1"	"1"	"1"	"827.74854"	"2481.23105"	"2481.23720"	"-2.48"	"-0.00205"	"16/166"	"16"	"166"	"4354231.32727051"	"HCD"	"MS2"	"0"	"109.4"	"100.000"	"70.0619"	"23000"	"23000"	"22979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.1"	""	"130.4"	""	"137.1"	""	"184.3"	""	"241.5"	"212.0"	""	"1204"	"71"	"37.000"	"30.000"	"4.43196672691831E-06"	"17"	"0"	"9.925E-07"	"1.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.11938"	"2481.23149"	"2481.23720"	"-2.30"	"-0.00285"	"3/166"	"3"	"166"	"105033.361999512"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"73.4037"	"24365"	"24365"	"24337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.5"	""	"6.5"	""	"4.2"	""	"10.1"	""	"15.0"	"14.3"	""	"1213"	"1"	"37.000"	"30.000"	"50.3304490497497"	"13"	"0.005166"	"0.1576"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.11951"	"2481.23174"	"2481.23720"	"-2.20"	"-0.00273"	"4/166"	"4"	"166"	"108330.016723633"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"77.0233"	"25831"	"25831"	"25801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.3"	""	"9.0"	""	"10.3"	""	"13.6"	""	"15.1"	"15.1"	""	"1208"	"3"	"37.000"	"30.000"	"32.5114948639838"	"13"	"0.001058"	"0.01337"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06348"	"2481.23208"	"2481.23720"	"-2.06"	"-0.00128"	"14/166"	"14"	"166"	"3179782.23193359"	"HCD"	"MS2"	"14.66777"	"59.0"	"100.000"	"71.8251"	"23720"	"23720"	"23699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.7"	""	"60.8"	""	"74.3"	""	"100.0"	""	"121.6"	"133.6"	""	"1215"	"56"	"37.000"	"30.000"	"0.000167319393727794"	"16"	"0"	"1.253E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.74902"	"2481.23252"	"2481.23720"	"-1.89"	"-0.00156"	"15/166"	"15"	"166"	"4399312.93719482"	"HCD"	"MS2"	"0"	"98.2"	"100.000"	"69.9797"	"23019"	"23019"	"23002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.6"	""	"111.6"	""	"127.6"	""	"161.2"	""	"216.2"	"183.0"	""	"1213"	"61"	"37.000"	"30.000"	"5.10306153407811E-05"	"16"	"0"	"1.423E-06"	"1.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"827.74908"	"2481.23270"	"2481.23720"	"-1.81"	"-0.00150"	"12/166"	"12"	"166"	"198786.324951172"	"HCD"	"MS2"	"15.53539"	"8.4"	"100.000"	"82.9491"	"28299"	"28299"	"28269"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.5"	""	"9.2"	""	"11.0"	""	"13.9"	""	"19.8"	"21.1"	""	"1226"	"44"	"37.000"	"30.000"	"0.00261493245025376"	"16"	"0"	"7.674E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9200"	"0.0000"	"1"	"1"	"1"	"621.06372"	"2481.23305"	"2481.23720"	"-1.67"	"-0.00104"	"16/166"	"16"	"166"	"4210331.72833252"	"HCD"	"MS2"	"38.71445"	"73.7"	"100.000"	"70.8100"	"23357"	"23357"	"23338"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.0"	""	"88.1"	""	"89.2"	""	"132.6"	""	"148.2"	"150.9"	""	"1227"	"25"	"37.000"	"30.000"	"0.193114359070116"	"16"	"0"	"0.0001166"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.74921"	"2481.23307"	"2481.23720"	"-1.66"	"-0.00138"	"6/166"	"6"	"166"	"98054.0800170898"	"HCD"	"MS2"	"38.38146"	"3.2"	"100.000"	"87.1273"	"29942"	"29942"	"29916"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.2"	""	"3.7"	""	"3.2"	""	"6.2"	""	"5.1"	"6.4"	""	"1227"	"9"	"37.000"	"30.000"	"8.4686574633387"	"13"	"0.00119"	"0.0155"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"827.74921"	"2481.23307"	"2481.23720"	"-1.66"	"-0.00138"	"7/166"	"7"	"166"	"157597.155822754"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"87.2552"	"30045"	"30045"	"30018"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.8"	""	"4.1"	""	"9.4"	""	"8.5"	""	"9.9"	"15.3"	""	"1227"	"10"	"37.000"	"30.000"	"5.96780421787169"	"16"	"0.001846"	"0.02559"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"827.74927"	"2481.23325"	"2481.23720"	"-1.59"	"-0.00132"	"7/166"	"7"	"166"	"195755.533325195"	"HCD"	"MS2"	"23.5643"	"8.5"	"100.000"	"82.6306"	"28169"	"28169"	"28141"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.4"	""	"13.0"	""	"9.9"	""	"16.5"	""	"14.9"	"15.9"	""	"1226"	"47"	"37.000"	"30.000"	"0.0011206254324955"	"22"	"0"	"5.374E-05"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.74927"	"2481.23325"	"2481.23720"	"-1.59"	"-0.00132"	"15/166"	"15"	"166"	"1626280.17193604"	"HCD"	"MS2"	"7.166373"	"49.6"	"100.000"	"65.2901"	"21113"	"21113"	"21091"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.7"	""	"43.2"	""	"62.9"	""	"111.2"	"0.3"	"102.6"	"92.7"	""	"1226"	"60"	"37.000"	"30.000"	"5.99046416445912E-05"	"16"	"0"	"4.471E-06"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9706"	"0.0000"	"1"	"1"	"1"	"621.06378"	"2481.23330"	"2481.23720"	"-1.57"	"-0.00098"	"8/166"	"8"	"166"	"2897526.17980957"	"HCD"	"MS2"	"24.6389"	"61.9"	"100.000"	"69.9888"	"22970"	"22970"	"22953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"82.0"	""	"73.5"	""	"83.0"	""	"83.3"	""	"138.2"	"128.3"	""	"1226"	"34"	"37.000"	"30.000"	"0.0229329790610769"	"15"	"0"	"6.299E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9697"	"0.0000"	"1"	"1"	"1"	"621.06384"	"2481.23354"	"2481.23720"	"-1.47"	"-0.00091"	"14/166"	"14"	"166"	"2741083.22369385"	"HCD"	"MS2"	"24.2397"	"58.5"	"100.000"	"69.8875"	"22981"	"22981"	"22959"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.5"	""	"75.1"	""	"71.8"	""	"89.7"	"0.8"	"129.3"	"114.4"	""	"1227"	"33"	"37.000"	"30.000"	"0.0315365780245819"	"16"	"0"	"0.0001032"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9608"	"0.0000"	"1"	"1"	"1"	"827.74939"	"2481.23362"	"2481.23720"	"-1.44"	"-0.00119"	"14/166"	"14"	"166"	"1139009.77056885"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"67.5153"	"21962"	"21962"	"21945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.5"	""	"46.3"	""	"50.6"	""	"73.0"	"0.1"	"84.8"	"75.9"	""	"1227"	"51"	"37.000"	"30.000"	"0.000482852591977943"	"17"	"0"	"5.827E-06"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06390"	"2481.23379"	"2481.23720"	"-1.38"	"-0.00085"	"7/166"	"7"	"166"	"3236789.43225098"	"HCD"	"MS2"	"26.63615"	"83.3"	"100.000"	"69.5803"	"22856"	"22856"	"22826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"136.1"	""	"118.6"	""	"103.1"	""	"102.0"	""	"171.8"	"164.1"	""	"1228"	"11"	"37.000"	"30.000"	"4.57265431978277"	"13"	"0"	"0.0001347"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"1241.12061"	"2481.23393"	"2481.23720"	"-1.32"	"-0.00163"	"9/166"	"9"	"166"	"122864.091491699"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"68.2414"	"22309"	"22309"	"22282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.6"	""	"5.5"	""	"6.1"	""	"27.5"	""	"18.7"	"18.9"	""	"1225"	"16"	"37.000"	"30.000"	"1.49660121352506"	"15"	"0.0006037"	"0.003811"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"827.74951"	"2481.23398"	"2481.23720"	"-1.30"	"-0.00107"	"12/166"	"12"	"166"	"228570.416320801"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"81.6036"	"27750"	"27750"	"27726"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.6"	""	"6.6"	""	"9.2"	""	"17.8"	""	"20.7"	"18.1"	""	"1225"	"46"	"37.000"	"30.000"	"0.00161475297381805"	"18"	"0"	"3.042E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06396"	"2481.23403"	"2481.23720"	"-1.28"	"-0.00079"	"11/166"	"11"	"166"	"1761548.92266846"	"HCD"	"MS2"	"8.847486"	"32.4"	"100.000"	"76.1695"	"25540"	"25540"	"25519"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.1"	""	"40.6"	""	"42.7"	""	"53.6"	"1.0"	"62.3"	"65.0"	""	"1226"	"20"	"37.000"	"30.000"	"0.672141134235772"	"14"	"0"	"6.424E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9756"	"0.0000"	"1"	"1"	"1"	"621.06396"	"2481.23403"	"2481.23720"	"-1.28"	"-0.00079"	"14/166"	"14"	"166"	"2226817.96679688"	"HCD"	"MS2"	"4.907054"	"42.3"	"100.000"	"74.2848"	"24724"	"24724"	"24705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.0"	""	"48.3"	""	"54.6"	""	"78.2"	""	"92.8"	"78.9"	""	"1226"	"41"	"37.000"	"30.000"	"0.00455470731530678"	"16"	"0"	"2.886E-05"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12073"	"2481.23418"	"2481.23720"	"-1.22"	"-0.00151"	"6/166"	"6"	"166"	"436360.157470703"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"65.9628"	"21388"	"21388"	"21363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.7"	""	"26.3"	""	"28.4"	""	"84.1"	""	"72.6"	"64.6"	""	"1226"	"31"	"37.000"	"30.000"	"0.044305788960813"	"15"	"0.0001889"	"0.0006787"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06403"	"2481.23427"	"2481.23720"	"-1.18"	"-0.00073"	"12/166"	"12"	"166"	"1712462.08203125"	"HCD"	"MS2"	"11.35024"	"34.2"	"100.000"	"75.1867"	"25144"	"25144"	"25119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.3"	""	"44.0"	""	"43.7"	""	"49.0"	"0.9"	"76.2"	"70.7"	""	"1224"	"44"	"37.000"	"30.000"	"0.00245895976239551"	"15"	"0"	"3.056E-05"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"827.74963"	"2481.23435"	"2481.23720"	"-1.15"	"-0.00095"	"16/166"	"16"	"166"	"1896711.27478027"	"HCD"	"MS2"	"6.120918"	"63.0"	"100.000"	"66.8698"	"21758"	"21758"	"21731"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"71.0"	""	"56.3"	""	"78.9"	""	"94.6"	"0.9"	"176.4"	"121.8"	""	"1221"	"39"	"37.000"	"30.000"	"0.00772121540131138"	"15"	"0"	"1.29E-05"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.74969"	"2481.23453"	"2481.23720"	"-1.07"	"-0.00089"	"21/166"	"21"	"166"	"5115534.11431885"	"HCD"	"MS2"	"0"	"109.7"	"100.000"	"70.9252"	"23404"	"23404"	"23386"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"133.7"	""	"121.2"	""	"133.1"	""	"181.6"	""	"243.4"	"231.6"	""	"1223"	"69"	"37.000"	"30.000"	"7.41987282059334E-06"	"17"	"0"	"7.711E-07"	"1.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06409"	"2481.23452"	"2481.23720"	"-1.08"	"-0.00067"	"16/166"	"16"	"166"	"2262629.15252686"	"HCD"	"MS2"	"1.908314"	"40.8"	"100.000"	"74.2755"	"24772"	"24772"	"24751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"51.3"	""	"47.6"	""	"48.2"	""	"63.2"	"2.1"	"92.6"	"82.5"	""	"1223"	"50"	"37.000"	"30.000"	"0.000574640804410276"	"16"	"0"	"1.404E-05"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06409"	"2481.23452"	"2481.23720"	"-1.08"	"-0.00067"	"12/166"	"12"	"166"	"2879715.79812622"	"HCD"	"MS2"	"8.654847"	"52.3"	"100.000"	"72.4773"	"24038"	"24038"	"24015"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"59.0"	""	"55.3"	""	"66.6"	""	"90.4"	""	"114.2"	"111.4"	""	"1223"	"50"	"37.000"	"30.000"	"0.000592101909103753"	"16"	"0"	"7.703E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06409"	"2481.23452"	"2481.23720"	"-1.08"	"-0.00067"	"15/166"	"15"	"166"	"5429447.35040283"	"HCD"	"MS2"	"21.57258"	"104.9"	"100.000"	"66.3770"	"21504"	"21504"	"21481"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.9"	""	"139.9"	""	"120.2"	""	"203.3"	"0.2"	"202.1"	"201.2"	""	"1223"	"20"	"37.000"	"30.000"	"0.581294831320816"	"14"	"7.476E-05"	"0.0001907"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9792"	"0.0000"	"1"	"1"	"1"	"621.06415"	"2481.23476"	"2481.23720"	"-0.98"	"-0.00061"	"12/166"	"12"	"166"	"3538115.71856689"	"HCD"	"MS2"	"10.83163"	"62.5"	"100.000"	"71.5614"	"23664"	"23664"	"23642"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"80.5"	""	"62.7"	""	"82.6"	""	"108.5"	""	"139.4"	"124.4"	""	"1225"	"48"	"37.000"	"30.000"	"0.00106685670995236"	"17"	"0"	"3.198E-05"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.8710"	"0.0000"	"1"	"1"	"1"	"621.06415"	"2481.23476"	"2481.23720"	"-0.98"	"-0.00061"	"17/166"	"17"	"166"	"7274752.32696533"	"HCD"	"MS2"	"30.64679"	"122.9"	"100.000"	"66.3050"	"21527"	"21527"	"21507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.9"	""	"158.9"	""	"146.6"	""	"237.9"	"1.0"	"216.3"	"251.5"	""	"1225"	"31"	"37.000"	"30.000"	"0.0468927921733145"	"18"	"0"	"9.192E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12109"	"2481.23491"	"2481.23720"	"-0.92"	"-0.00114"	"13/166"	"13"	"166"	"1958865.85675049"	"HCD"	"MS2"	"0"	"133.2"	"100.000"	"65.7525"	"21249"	"21249"	"21225"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"131.3"	""	"110.3"	""	"118.8"	""	"360.6"	""	"289.5"	"256.6"	""	"1224"	"86"	"37.000"	"30.000"	"1.66246083252952E-07"	"18"	"0"	"3.452E-06"	"1.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.74982"	"2481.23490"	"2481.23720"	"-0.93"	"-0.00077"	"19/166"	"19"	"166"	"2618772.05596924"	"HCD"	"MS2"	"2.115109"	"71.2"	"100.000"	"68.6568"	"22478"	"22478"	"22458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.8"	""	"79.6"	""	"82.4"	""	"134.7"	"0.3"	"151.5"	"148.3"	""	"1224"	"76"	"37.000"	"30.000"	"1.66246083252952E-06"	"18"	"0"	"4.65E-07"	"1.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.74982"	"2481.23490"	"2481.23720"	"-0.93"	"-0.00077"	"19/166"	"19"	"166"	"5066959.67279053"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"72.6963"	"24128"	"24128"	"24111"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.7"	""	"117.2"	""	"133.3"	""	"166.8"	""	"237.8"	"224.0"	""	"1224"	"64"	"37.000"	"30.000"	"2.51623629315967E-05"	"17"	"0"	"2.182E-07"	"1.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9848"	"0.0000"	"1"	"1"	"1"	"827.74988"	"2481.23508"	"2481.23720"	"-0.85"	"-0.00071"	"9/166"	"9"	"166"	"3851229.89672852"	"HCD"	"MS2"	"0"	"93.1"	"100.000"	"77.9654"	"26216"	"26216"	"26199"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.2"	""	"78.4"	""	"108.7"	""	"125.2"	""	"278.1"	"201.4"	""	"1230"	"66"	"37.000"	"30.000"	"1.64389894132794E-05"	"17"	"0"	"8.895E-07"	"1.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12122"	"2481.23516"	"2481.23720"	"-0.82"	"-0.00102"	"3/166"	"3"	"166"	"84035.2582397461"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"70.5902"	"23216"	"23216"	"23187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.9"	""	"4.7"	""	"5.8"	""	"6.9"	""	"11.5"	"12.5"	""	"1230"	"3"	"37.000"	"30.000"	"30.1908343833851"	"13"	"0.006001"	"0.2099"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.7097"	"0.0000"	"1"	"1"	"1"	"621.06427"	"2481.23525"	"2481.23720"	"-0.78"	"-0.00049"	"10/166"	"10"	"166"	"1735233.25244141"	"HCD"	"MS2"	"9.972531"	"32.4"	"100.000"	"75.8765"	"25425"	"25425"	"25407"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.3"	""	"44.5"	""	"37.0"	""	"56.5"	""	"62.1"	"66.2"	""	"1230"	"31"	"37.000"	"30.000"	"0.0531955270047052"	"23"	"0"	"5.605E-05"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.74994"	"2481.23526"	"2481.23720"	"-0.78"	"-0.00064"	"17/166"	"17"	"166"	"849056.674621582"	"HCD"	"MS2"	"0"	"33.5"	"100.000"	"64.1991"	"20615"	"20615"	"20585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.3"	""	"31.9"	""	"35.6"	""	"76.6"	"0.1"	"73.0"	"64.9"	""	"1230"	"65"	"37.000"	"30.000"	"2.18210234378649E-05"	"17"	"0"	"8.416E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12134"	"2481.23540"	"2481.23720"	"-0.72"	"-0.00090"	"12/166"	"12"	"166"	"199309.664001465"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"66.1092"	"21395"	"21395"	"21369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.2"	""	"9.3"	""	"8.5"	""	"38.6"	""	"29.5"	"25.0"	""	"1232"	"42"	"37.000"	"30.000"	"0.00398639851301127"	"15"	"0.0001889"	"0.0005291"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75000"	"2481.23545"	"2481.23720"	"-0.71"	"-0.00058"	"21/166"	"21"	"166"	"3488519.52105713"	"HCD"	"MS2"	"0"	"84.1"	"100.000"	"66.5308"	"21620"	"21620"	"21603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.9"	""	"81.1"	""	"83.3"	""	"214.6"	""	"171.5"	"151.1"	""	"1234"	"64"	"37.000"	"30.000"	"2.6441443708522E-05"	"16"	"0"	"1.818E-06"	"1.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9859"	"0.0000"	"1"	"1"	"1"	"827.75000"	"2481.23545"	"2481.23720"	"-0.71"	"-0.00058"	"20/166"	"20"	"166"	"6065324.35778809"	"HCD"	"MS2"	"0"	"120.6"	"99.998"	"71.2830"	"23550"	"23550"	"23530"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.7"	""	"127.4"	""	"132.8"	""	"203.2"	""	"275.8"	"261.6"	""	"1234"	"71"	"37.000"	"30.000"	"4.58442808082264E-06"	"18"	"0"	"4.262E-07"	"1.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06433"	"2481.23549"	"2481.23720"	"-0.69"	"-0.00043"	"12/166"	"12"	"166"	"2512521.98388672"	"HCD"	"MS2"	"23.07025"	"48.8"	"100.000"	"73.9599"	"24643"	"24643"	"24623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"56.2"	""	"54.9"	""	"58.4"	""	"81.6"	""	"111.5"	"104.9"	""	"1234"	"45"	"37.000"	"30.000"	"0.00196464987090502"	"15"	"0"	"6.865E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06433"	"2481.23549"	"2481.23720"	"-0.69"	"-0.00043"	"16/166"	"16"	"166"	"17812958.6271362"	"HCD"	"MS2"	"2.534248"	"259.2"	"100.000"	"65.5943"	"21237"	"21237"	"21219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"257.5"	""	"233.0"	""	"239.5"	""	"676.0"	"4.0"	"543.9"	"509.2"	""	"1234"	"48"	"37.000"	"30.000"	"0.00101224389006411"	"15"	"0"	"9.272E-06"	"1.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"827.75006"	"2481.23563"	"2481.23720"	"-0.63"	"-0.00052"	"7/166"	"7"	"166"	"349060.731811523"	"HCD"	"MS2"	"19.44556"	"13.0"	"100.000"	"81.7008"	"27739"	"27739"	"27712"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.8"	""	"13.0"	""	"21.4"	""	"16.3"	""	"28.6"	"28.8"	""	"1234"	"42"	"37.000"	"30.000"	"0.00429818559206344"	"18"	"0"	"1.807E-05"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"827.75006"	"2481.23563"	"2481.23720"	"-0.63"	"-0.00052"	"7/166"	"7"	"166"	"462043.962585449"	"HCD"	"MS2"	"14.19817"	"14.7"	"100.000"	"80.4633"	"27285"	"27285"	"27263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"17.4"	""	"20.8"	""	"27.5"	""	"31.3"	"29.0"	""	"1234"	"40"	"37.000"	"30.000"	"0.00668782905951083"	"18"	"0"	"2.259E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12146"	"2481.23564"	"2481.23720"	"-0.63"	"-0.00078"	"7/166"	"7"	"166"	"162438.01965332"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"66.5522"	"21576"	"21576"	"21545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.3"	""	"8.6"	""	"8.7"	""	"19.9"	""	"19.3"	"14.6"	""	"1232"	"5"	"37.000"	"30.000"	"19.7506190389537"	"13"	"0.002297"	"0.03394"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9000"	"0.0000"	"1"	"1"	"1"	"621.06439"	"2481.23574"	"2481.23720"	"-0.59"	"-0.00036"	"15/166"	"15"	"166"	"3384024.3862915"	"HCD"	"MS2"	"8.354237"	"49.8"	"100.000"	"73.0298"	"24212"	"24212"	"24193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.2"	""	"55.4"	""	"58.7"	""	"83.0"	"2.0"	"108.4"	"112.0"	""	"1231"	"40"	"37.000"	"30.000"	"0.00567842713413756"	"19"	"0"	"1.238E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9474"	"0.0000"	"1"	"1"	"1"	"621.06439"	"2481.23574"	"2481.23720"	"-0.59"	"-0.00036"	"17/166"	"17"	"166"	"3407321.55047607"	"HCD"	"MS2"	"8.469384"	"45.7"	"100.000"	"72.9771"	"24242"	"24242"	"24223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.4"	""	"46.7"	""	"54.0"	""	"74.1"	""	"107.4"	"94.4"	""	"1231"	"38"	"37.000"	"30.000"	"0.0101912641251549"	"17"	"0"	"1.108E-05"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.8750"	"0.0000"	"1"	"1"	"1"	"621.06439"	"2481.23574"	"2481.23720"	"-0.59"	"-0.00036"	"15/166"	"15"	"166"	"3804127.31689453"	"HCD"	"MS2"	"11.79528"	"56.3"	"100.000"	"72.1593"	"23908"	"23908"	"23887"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"69.2"	""	"67.1"	""	"69.8"	""	"94.3"	""	"125.7"	"112.5"	""	"1231"	"32"	"37.000"	"30.000"	"0.0430752748539399"	"18"	"0"	"1.867E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9783"	"0.0000"	"1"	"1"	"1"	"827.75012"	"2481.23581"	"2481.23720"	"-0.56"	"-0.00046"	"10/166"	"10"	"166"	"189048.896606445"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"82.2707"	"28022"	"28022"	"27998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.4"	""	"8.4"	""	"10.5"	""	"14.2"	""	"19.2"	"18.7"	""	"1231"	"46"	"37.000"	"30.000"	"0.00159671739738413"	"17"	"0"	"6.99E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9857"	"0.0000"	"1"	"1"	"1"	"827.75012"	"2481.23581"	"2481.23720"	"-0.56"	"-0.00046"	"16/166"	"16"	"166"	"2380700.74255371"	"HCD"	"MS2"	"1.081636"	"55.5"	"100.000"	"76.1225"	"25521"	"25521"	"25503"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.2"	""	"49.3"	""	"64.9"	""	"101.5"	"2.5"	"123.9"	"118.0"	""	"1231"	"70"	"37.000"	"30.000"	"6.59520132373746E-06"	"17"	"0"	"1.381E-06"	"1.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12158"	"2481.23589"	"2481.23720"	"-0.53"	"-0.00065"	"23/166"	"23"	"166"	"2091112.68780518"	"HCD"	"MS2"	"0"	"149.0"	"100.000"	"65.6521"	"21261"	"21261"	"21235"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"152.1"	""	"125.6"	""	"139.3"	""	"396.4"	"1.3"	"326.4"	"274.6"	""	"1232"	"61"	"37.000"	"30.000"	"4.60872412314871E-05"	"16"	"0"	"1.461E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9167"	"0.0000"	"1"	"1"	"1"	"621.06445"	"2481.23598"	"2481.23720"	"-0.49"	"-0.00030"	"8/166"	"8"	"166"	"1682644.39385986"	"HCD"	"MS2"	"9.618361"	"33.3"	"100.000"	"76.1887"	"25497"	"25497"	"25473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.7"	""	"42.6"	""	"41.5"	""	"50.8"	""	"64.9"	"71.2"	""	"1225"	"24"	"37.000"	"30.000"	"0.272964452143471"	"16"	"0"	"0.0001306"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06445"	"2481.23598"	"2481.23720"	"-0.49"	"-0.00030"	"17/166"	"17"	"166"	"3399608.37640381"	"HCD"	"MS2"	"34.62099"	"62.2"	"100.000"	"71.0076"	"23386"	"23386"	"23363"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.3"	""	"71.0"	""	"79.2"	""	"107.8"	""	"131.4"	"133.0"	""	"1225"	"37"	"37.000"	"30.000"	"0.0114315756063624"	"15"	"0"	"2.192E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9800"	"0.0000"	"1"	"1"	"1"	"827.75018"	"2481.23600"	"2481.23720"	"-0.48"	"-0.00040"	"13/166"	"13"	"166"	"249479.632263184"	"HCD"	"MS2"	"13.00199"	"9.8"	"100.000"	"82.0609"	"27886"	"27886"	"27856"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"13.8"	""	"8.3"	""	"17.2"	""	"26.0"	"19.5"	""	"1229"	"50"	"37.000"	"30.000"	"0.000578791157063286"	"16"	"0"	"6.498E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9859"	"0.0000"	"1"	"1"	"1"	"827.75018"	"2481.23600"	"2481.23720"	"-0.48"	"-0.00040"	"20/166"	"20"	"166"	"7313501.37182617"	"HCD"	"MS2"	"3.217489"	"178.6"	"100.000"	"71.9696"	"23779"	"23779"	"23761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.7"	""	"200.9"	""	"222.9"	""	"278.3"	""	"389.6"	"377.2"	""	"1229"	"71"	"37.000"	"30.000"	"4.70459114946967E-06"	"18"	"0"	"4.102E-07"	"1.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9868"	"0.0000"	"1"	"1"	"1"	"827.75018"	"2481.23600"	"2481.23720"	"-0.48"	"-0.00040"	"14/166"	"14"	"166"	"13070666.5507202"	"HCD"	"MS2"	"0"	"243.6"	"98.954"	"77.1479"	"25882"	"25882"	"25865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"286.6"	""	"248.3"	""	"293.2"	""	"407.1"	""	"564.3"	"517.7"	""	"1229"	"76"	"37.000"	"30.000"	"1.65394813701309E-06"	"19"	"0"	"8.507E-07"	"1.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75024"	"2481.23618"	"2481.23720"	"-0.41"	"-0.00034"	"9/166"	"9"	"166"	"3476399.11053467"	"HCD"	"MS2"	"4.473848"	"83.0"	"100.000"	"77.9480"	"26259"	"26259"	"26241"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"96.2"	""	"80.2"	""	"92.1"	""	"121.4"	""	"224.1"	"177.0"	""	"1233"	"70"	"37.000"	"30.000"	"6.82233562822231E-06"	"17"	"0"	"4.872E-07"	"1.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75024"	"2481.23618"	"2481.23720"	"-0.41"	"-0.00034"	"19/166"	"19"	"166"	"5166121.33453369"	"HCD"	"MS2"	"0"	"106.5"	"98.899"	"70.6780"	"23252"	"23252"	"23235"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.2"	""	"112.4"	""	"126.5"	""	"187.2"	""	"225.2"	"235.0"	""	"1233"	"67"	"37.000"	"30.000"	"1.26163311854076E-05"	"17"	"0"	"6.528E-07"	"1.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06451"	"2481.23623"	"2481.23720"	"-0.39"	"-0.00024"	"15/166"	"15"	"166"	"2789104.09997559"	"HCD"	"MS2"	"7.156591"	"47.9"	"100.000"	"73.3001"	"24374"	"24374"	"24351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"58.0"	""	"53.0"	""	"62.1"	""	"75.5"	"0.6"	"99.1"	"106.7"	""	"1233"	"44"	"37.000"	"30.000"	"0.00240399234786089"	"15"	"0"	"4.319E-05"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06451"	"2481.23623"	"2481.23720"	"-0.39"	"-0.00024"	"13/166"	"13"	"166"	"3317285.1940918"	"HCD"	"MS2"	"9.182826"	"59.7"	"100.000"	"71.2481"	"23536"	"23536"	"23514"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.6"	""	"64.5"	""	"76.8"	""	"88.9"	""	"155.6"	"111.6"	""	"1233"	"52"	"37.000"	"30.000"	"0.00039258443863973"	"16"	"0"	"9.815E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75031"	"2481.23636"	"2481.23720"	"-0.34"	"-0.00028"	"17/166"	"17"	"166"	"2539877.83404541"	"HCD"	"MS2"	"0"	"59.7"	"100.000"	"75.8328"	"25408"	"25408"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"77.1"	""	"69.3"	""	"68.9"	""	"98.0"	""	"122.5"	"132.0"	""	"1230"	"72"	"37.000"	"30.000"	"4.10086163066377E-06"	"17"	"0"	"1.207E-06"	"1.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75031"	"2481.23636"	"2481.23720"	"-0.34"	"-0.00028"	"20/166"	"20"	"166"	"2824872.02935791"	"HCD"	"MS2"	"0"	"65.9"	"100.000"	"75.4842"	"25265"	"25265"	"25247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"76.9"	""	"68.5"	""	"83.4"	""	"106.3"	""	"154.9"	"142.4"	""	"1230"	"66"	"37.000"	"30.000"	"1.63634591177627E-05"	"17"	"0"	"7.328E-07"	"1.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75031"	"2481.23636"	"2481.23720"	"-0.34"	"-0.00028"	"20/166"	"20"	"166"	"6224939.11138916"	"HCD"	"MS2"	"5.57453"	"162.3"	"100.000"	"71.7798"	"23754"	"23754"	"23738"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"214.8"	""	"173.9"	""	"204.4"	""	"261.9"	""	"341.3"	"346.8"	""	"1230"	"64"	"37.000"	"30.000"	"2.43150471341899E-05"	"17"	"0"	"7.183E-07"	"1.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12183"	"2481.23638"	"2481.23720"	"-0.33"	"-0.00041"	"6/166"	"6"	"166"	"136405.592041016"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"77.0451"	"25891"	"25891"	"25861"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.8"	""	"12.7"	""	"12.8"	""	"17.2"	""	"26.4"	"28.5"	""	"1230"	"30"	"37.000"	"30.000"	"0.0613585539250871"	"14"	"0.0001889"	"0.0005935"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.7000"	"0.0000"	"1"	"1"	"1"	"621.06458"	"2481.23647"	"2481.23720"	"-0.29"	"-0.00018"	"13/166"	"13"	"166"	"3541069.71600342"	"HCD"	"MS2"	"26.69678"	"61.5"	"100.000"	"68.4526"	"22344"	"22344"	"22314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.0"	""	"64.3"	""	"70.5"	""	"122.7"	"0.7"	"121.6"	"122.9"	""	"1230"	"10"	"37.000"	"30.000"	"6.46956552401283"	"16"	"0"	"7.461E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9881"	"0.0000"	"1"	"1"	"1"	"827.75037"	"2481.23655"	"2481.23720"	"-0.26"	"-0.00022"	"17/166"	"17"	"166"	"1339596.16052246"	"HCD"	"MS2"	"4.977561"	"45.8"	"100.000"	"68.0351"	"22173"	"22173"	"22154"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.5"	""	"48.9"	""	"59.0"	""	"88.8"	"2.5"	"98.0"	"84.8"	""	"1230"	"84"	"37.000"	"30.000"	"2.44835909890401E-07"	"19"	"0"	"1.29E-06"	"1.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"827.75037"	"2481.23655"	"2481.23720"	"-0.26"	"-0.00022"	"14/166"	"14"	"166"	"2466538.00762939"	"HCD"	"MS2"	"0"	"68.9"	"100.000"	"69.6513"	"22884"	"22884"	"22873"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.2"	""	"82.7"	""	"87.5"	""	"115.8"	"0.6"	"148.5"	"147.1"	""	"1230"	"49"	"37.000"	"30.000"	"0.000730928869873767"	"19"	"0"	"7.323E-06"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9867"	"0.0000"	"1"	"1"	"1"	"827.75037"	"2481.23655"	"2481.23720"	"-0.26"	"-0.00022"	"17/166"	"17"	"166"	"6433130.68951416"	"HCD"	"MS2"	"1.308311"	"135.9"	"100.000"	"72.0693"	"23872"	"23872"	"23855"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"172.4"	""	"147.9"	""	"155.8"	""	"223.4"	""	"297.0"	"297.1"	""	"1230"	"75"	"37.000"	"30.000"	"1.74130607741662E-06"	"18"	"0"	"1.995E-07"	"1.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06464"	"2481.23672"	"2481.23720"	"-0.19"	"-0.00012"	"12/166"	"12"	"166"	"1486884.06829834"	"HCD"	"MS2"	"16.22944"	"31.1"	"100.000"	"75.2772"	"25129"	"25129"	"25105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.3"	""	"33.7"	""	"39.9"	""	"49.1"	"1.2"	"64.9"	"58.6"	""	"1236"	"52"	"37.000"	"30.000"	"0.000436504248534511"	"16"	"0"	"4.245E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06464"	"2481.23672"	"2481.23720"	"-0.19"	"-0.00012"	"14/166"	"14"	"166"	"3744750.57641602"	"HCD"	"MS2"	"8.232533"	"59.6"	"100.000"	"72.1606"	"23858"	"23858"	"23841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.0"	""	"73.2"	""	"70.3"	""	"104.1"	""	"125.3"	"132.2"	""	"1236"	"35"	"37.000"	"30.000"	"0.0210857219382352"	"15"	"0"	"1.984E-05"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9848"	"0.0000"	"1"	"1"	"1"	"827.75043"	"2481.23673"	"2481.23720"	"-0.19"	"-0.00016"	"17/166"	"17"	"166"	"3070298.56304932"	"HCD"	"MS2"	"4.79987"	"69.6"	"100.000"	"69.3572"	"22764"	"22764"	"22746"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.8"	""	"79.6"	""	"75.1"	""	"116.5"	"0.4"	"148.9"	"156.2"	""	"1236"	"66"	"37.000"	"30.000"	"1.66336850882683E-05"	"18"	"0"	"6.482E-07"	"1.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75043"	"2481.23673"	"2481.23720"	"-0.19"	"-0.00016"	"16/166"	"16"	"166"	"4838958.16070557"	"HCD"	"MS2"	"0"	"96.0"	"100.000"	"70.2936"	"23147"	"23147"	"23130"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.5"	""	"100.6"	""	"118.7"	""	"167.2"	""	"207.4"	"200.7"	""	"1236"	"64"	"37.000"	"30.000"	"2.56441598348037E-05"	"17"	"0"	"3.123E-07"	"1.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75043"	"2481.23673"	"2481.23720"	"-0.19"	"-0.00016"	"16/166"	"16"	"166"	"5425319.42687988"	"HCD"	"MS2"	"0"	"109.3"	"100.000"	"70.3642"	"23124"	"23124"	"23107"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.4"	""	"107.9"	""	"132.3"	""	"173.8"	"1.2"	"254.5"	"233.8"	""	"1236"	"72"	"37.000"	"30.000"	"4.09249799287689E-06"	"17"	"0"	"3.96E-07"	"1.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9861"	"0.0000"	"1"	"1"	"1"	"827.75043"	"2481.23673"	"2481.23720"	"-0.19"	"-0.00016"	"13/166"	"13"	"166"	"7469323.03320313"	"HCD"	"MS2"	"15.47008"	"161.4"	"100.000"	"77.5618"	"26102"	"26102"	"26085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"201.2"	""	"188.8"	""	"194.7"	""	"276.3"	"1.4"	"333.6"	"336.3"	""	"1236"	"72"	"37.000"	"30.000"	"3.70670885125905E-06"	"18"	"0"	"9.357E-07"	"1.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75049"	"2481.23691"	"2481.23720"	"-0.12"	"-0.00010"	"17/166"	"17"	"166"	"2883257.98065186"	"HCD"	"MS2"	"4.821271"	"78.0"	"100.000"	"68.9655"	"22604"	"22604"	"22586"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.3"	""	"82.8"	""	"92.4"	""	"132.5"	""	"171.2"	"166.2"	""	"1233"	"55"	"37.000"	"30.000"	"0.000198578890982624"	"16"	"0"	"6.692E-07"	"1.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"827.75049"	"2481.23691"	"2481.23720"	"-0.12"	"-0.00010"	"9/166"	"9"	"166"	"3125034.8916626"	"HCD"	"MS2"	"3.222707"	"83.6"	"100.000"	"64.7370"	"20887"	"20887"	"20867"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"91.4"	""	"82.8"	""	"83.1"	""	"218.4"	""	"171.2"	"152.2"	""	"1233"	"66"	"37.000"	"30.000"	"1.72954983779723E-05"	"20"	"0"	"1.004E-06"	"1.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9868"	"0.0000"	"1"	"1"	"1"	"827.75049"	"2481.23691"	"2481.23720"	"-0.12"	"-0.00010"	"13/166"	"13"	"166"	"12569302.3603516"	"HCD"	"MS2"	"0.2546806"	"253.8"	"100.000"	"77.0914"	"25910"	"25910"	"25893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"310.2"	"3.2"	"267.8"	""	"316.1"	""	"420.6"	""	"550.1"	"545.0"	""	"1233"	"76"	"37.000"	"30.000"	"1.59196340752623E-06"	"18"	"0"	"1.219E-06"	"1.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06470"	"2481.23696"	"2481.23720"	"-0.10"	"-0.00006"	"14/166"	"14"	"166"	"17568551.3097534"	"HCD"	"MS2"	"5.465973"	"238.4"	"100.000"	"65.6992"	"21227"	"21227"	"21209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.7"	""	"201.4"	""	"233.7"	""	"622.6"	""	"508.1"	"471.9"	""	"1232"	"62"	"37.000"	"30.000"	"4.09808264220272E-05"	"16"	"0"	"1.295E-06"	"1.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75055"	"2481.23709"	"2481.23720"	"-0.04"	"-0.00003"	"17/166"	"17"	"166"	"1454610.4309082"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"65.3671"	"21092"	"21092"	"21065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.8"	""	"43.3"	""	"50.7"	""	"107.8"	"0.1"	"87.3"	"88.4"	""	"1232"	"66"	"37.000"	"30.000"	"1.68492553540494E-05"	"17"	"0"	"3.555E-06"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"827.75055"	"2481.23709"	"2481.23720"	"-0.04"	"-0.00003"	"14/166"	"14"	"166"	"1707933.66955566"	"HCD"	"MS2"	"5.989156"	"65.1"	"100.000"	"66.9763"	"21749"	"21749"	"21721"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"84.9"	""	"77.8"	""	"85.2"	""	"94.5"	""	"164.1"	"116.4"	""	"1232"	"35"	"37.000"	"30.000"	"0.0188616947515346"	"17"	"0"	"3.341E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12219"	"2481.23711"	"2481.23720"	"-0.04"	"-0.00004"	"4/166"	"4"	"166"	"171626.346435547"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"72.3780"	"23998"	"23998"	"23967"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.4"	""	"12.0"	""	"15.2"	""	"20.2"	""	"27.5"	"30.5"	""	"1232"	"14"	"37.000"	"30.000"	"2.73892860760971"	"14"	"0.001217"	"0.0183"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75061"	"2481.23728"	"2481.23720"	"0.03"	"0.00003"	"17/166"	"17"	"166"	"3256322.91912842"	"HCD"	"MS2"	"0"	"77.8"	"100.000"	"75.1847"	"25091"	"25091"	"25073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.1"	""	"78.1"	""	"101.2"	""	"122.8"	""	"173.6"	"171.5"	""	"1232"	"73"	"37.000"	"30.000"	"2.78984909220631E-06"	"17"	"0"	"1.454E-06"	"1.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75061"	"2481.23728"	"2481.23720"	"0.03"	"0.00003"	"21/166"	"21"	"166"	"3883160.11218262"	"HCD"	"MS2"	"0.6514758"	"81.5"	"100.000"	"74.8566"	"25009"	"25009"	"24991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.1"	""	"84.3"	""	"91.0"	""	"141.1"	"0.0"	"183.0"	"176.5"	""	"1232"	"73"	"37.000"	"30.000"	"3.30050741028219E-06"	"17"	"0"	"9.459E-07"	"1.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9420"	"0.0000"	"1"	"1"	"1"	"827.75061"	"2481.23728"	"2481.23720"	"0.03"	"0.00003"	"20/166"	"20"	"166"	"4944733.89404297"	"HCD"	"MS2"	"0"	"101.7"	"100.000"	"66.2170"	"21492"	"21492"	"21475"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.7"	""	"89.5"	""	"95.4"	""	"269.4"	"0.6"	"212.4"	"194.3"	""	"1232"	"69"	"37.000"	"30.000"	"8.21449202212607E-06"	"20"	"0"	"7.973E-07"	"1.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9851"	"0.0000"	"1"	"1"	"1"	"827.75067"	"2481.23746"	"2481.23720"	"0.11"	"0.00009"	"15/166"	"15"	"166"	"5396792.2522583"	"HCD"	"MS2"	"0.64809"	"115.7"	"100.000"	"72.3828"	"24000"	"24000"	"23983"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.7"	""	"130.7"	""	"134.3"	""	"191.1"	""	"249.3"	"251.2"	""	"1230"	"67"	"37.000"	"30.000"	"1.36419079817713E-05"	"17"	"0"	"7.825E-07"	"1.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9836"	"0.0000"	"1"	"1"	"1"	"827.75073"	"2481.23764"	"2481.23720"	"0.18"	"0.00015"	"17/166"	"17"	"166"	"2365413.53997803"	"HCD"	"MS2"	"4.102895"	"61.0"	"100.000"	"76.2537"	"25523"	"25523"	"25505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.0"	""	"67.8"	""	"78.4"	""	"106.4"	""	"126.7"	"129.8"	""	"1238"	"61"	"37.000"	"30.000"	"4.87181343821266E-05"	"17"	"0"	"3.842E-07"	"1.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75073"	"2481.23764"	"2481.23720"	"0.18"	"0.00015"	"19/166"	"19"	"166"	"3076921.65338135"	"HCD"	"MS2"	"5.428845"	"73.1"	"100.000"	"69.3267"	"22700"	"22700"	"22682"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"81.4"	""	"75.8"	""	"83.3"	""	"136.2"	""	"168.3"	"155.3"	""	"1238"	"62"	"37.000"	"30.000"	"4.00581279148373E-05"	"16"	"0"	"7.745E-07"	"1.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9828"	"0.0000"	"1"	"1"	"1"	"827.75073"	"2481.23764"	"2481.23720"	"0.18"	"0.00015"	"8/166"	"8"	"166"	"7346782.88690186"	"HCD"	"MS2"	"13.32668"	"183.9"	"100.000"	"77.6227"	"26075"	"26075"	"26057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"229.9"	""	"214.1"	""	"200.9"	""	"330.5"	"1.6"	"396.0"	"374.4"	""	"1238"	"58"	"37.000"	"30.000"	"9.00929170880237E-05"	"17"	"0"	"7.088E-07"	"1.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9851"	"0.0000"	"1"	"1"	"1"	"827.75079"	"2481.23783"	"2481.23720"	"0.25"	"0.00021"	"20/166"	"20"	"166"	"3176178.8572998"	"HCD"	"MS2"	"2.46214"	"76.6"	"100.000"	"69.6538"	"22834"	"22834"	"22810"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.7"	""	"85.1"	""	"79.5"	""	"128.1"	""	"168.4"	"165.7"	""	"1241"	"67"	"37.000"	"30.000"	"1.22388830775927E-05"	"18"	"0"	"2.474E-07"	"1.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75079"	"2481.23783"	"2481.23720"	"0.25"	"0.00021"	"15/166"	"15"	"166"	"4221598.47589111"	"HCD"	"MS2"	"1.066792"	"93.6"	"100.000"	"68.3406"	"22349"	"22349"	"22330"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.8"	""	"81.0"	""	"94.7"	""	"232.7"	"2.0"	"204.2"	"191.6"	""	"1241"	"62"	"37.000"	"30.000"	"3.60364321071974E-05"	"16"	"0"	"6.042E-07"	"1.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75079"	"2481.23783"	"2481.23720"	"0.25"	"0.00021"	"21/166"	"21"	"166"	"6486478.95068359"	"HCD"	"MS2"	"1.167162"	"142.6"	"100.000"	"72.2850"	"23908"	"23908"	"23889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"168.2"	""	"166.1"	""	"172.2"	""	"235.4"	""	"308.6"	"308.5"	""	"1241"	"73"	"37.000"	"30.000"	"3.33996400051357E-06"	"17"	"0"	"9.879E-07"	"1.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75079"	"2481.23783"	"2481.23720"	"0.25"	"0.00021"	"21/166"	"21"	"166"	"15376911.0387573"	"HCD"	"MS2"	"0.5633224"	"309.6"	"100.000"	"65.6651"	"21213"	"21213"	"21193"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"295.5"	""	"260.6"	""	"274.3"	""	"888.1"	""	"644.8"	"580.6"	""	"1241"	"71"	"37.000"	"30.000"	"5.36712593600319E-06"	"17"	"0"	"1.895E-07"	"1.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12256"	"2481.23784"	"2481.23720"	"0.26"	"0.00032"	"5/166"	"5"	"166"	"106691.666564941"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"70.7985"	"23353"	"23353"	"23322"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"6.9"	""	"8.1"	""	"8.0"	""	"13.4"	"13.4"	""	"1241"	"6"	"37.000"	"30.000"	"13.9232873370721"	"13"	"0.004039"	"0.1042"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"827.75085"	"2481.23801"	"2481.23720"	"0.33"	"0.00027"	"8/166"	"8"	"166"	"240690.804443359"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"82.3703"	"28012"	"28012"	"27984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.7"	""	"13.4"	""	"10.5"	""	"14.4"	""	"12.8"	"22.4"	""	"1241"	"28"	"37.000"	"30.000"	"0.10250422958011"	"17"	"0"	"3.152E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"827.75085"	"2481.23801"	"2481.23720"	"0.33"	"0.00027"	"14/166"	"14"	"166"	"401050.789611816"	"HCD"	"MS2"	"7.207827"	"15.4"	"100.000"	"80.9831"	"27446"	"27446"	"27424"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.1"	""	"19.1"	""	"19.5"	""	"24.2"	""	"33.5"	"33.6"	""	"1241"	"38"	"37.000"	"30.000"	"0.00905194248500854"	"19"	"0"	"8.567E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9516"	"0.0000"	"1"	"1"	"1"	"827.75085"	"2481.23801"	"2481.23720"	"0.33"	"0.00027"	"10/166"	"10"	"166"	"567134.330383301"	"HCD"	"MS2"	"5.004202"	"17.9"	"100.000"	"80.1542"	"27159"	"27159"	"27135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.5"	""	"26.4"	""	"19.3"	""	"27.2"	""	"43.9"	"35.6"	""	"1241"	"62"	"37.000"	"30.000"	"3.49737165440005E-05"	"20"	"0"	"1.904E-06"	"1.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75085"	"2481.23801"	"2481.23720"	"0.33"	"0.00027"	"9/166"	"9"	"166"	"1808219.5994873"	"HCD"	"MS2"	"24.64092"	"48.3"	"100.000"	"78.5779"	"26516"	"26516"	"26495"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.7"	""	"47.8"	""	"58.4"	""	"77.1"	""	"108.1"	"105.8"	""	"1241"	"62"	"37.000"	"30.000"	"3.62862247211651E-05"	"16"	"0"	"2.11E-06"	"1.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9851"	"0.0000"	"1"	"1"	"1"	"827.75085"	"2481.23801"	"2481.23720"	"0.33"	"0.00027"	"16/166"	"16"	"166"	"3534104.28808594"	"HCD"	"MS2"	"0.4446249"	"76.7"	"100.000"	"75.1705"	"25137"	"25137"	"25119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"99.5"	""	"76.7"	""	"88.8"	""	"134.9"	""	"165.8"	"163.8"	""	"1241"	"67"	"37.000"	"30.000"	"1.17149863211425E-05"	"18"	"0"	"1.124E-06"	"1.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75085"	"2481.23801"	"2481.23720"	"0.33"	"0.00027"	"21/166"	"21"	"166"	"36850620.4840088"	"HCD"	"MS2"	"0"	"367.1"	"52.894"	"65.5899"	"21236"	"21236"	"21219"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"347.1"	""	"315.0"	""	"348.4"	""	"1004.4"	"2.2"	"769.3"	"702.6"	""	"1241"	"70"	"37.000"	"30.000"	"6.78799925271835E-06"	"17"	"0"	"4.254E-07"	"1.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06500"	"2481.23818"	"2481.23720"	"0.40"	"0.00025"	"15/166"	"15"	"166"	"2872092.98516846"	"HCD"	"MS2"	"6.065124"	"58.2"	"100.000"	"70.5648"	"23205"	"23205"	"23187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.1"	""	"69.8"	""	"73.1"	""	"101.3"	"1.2"	"119.0"	"110.5"	""	"1238"	"44"	"37.000"	"30.000"	"0.00257448667895799"	"15"	"0"	"1.347E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06500"	"2481.23818"	"2481.23720"	"0.40"	"0.00025"	"16/166"	"16"	"166"	"2875601.21612549"	"HCD"	"MS2"	"9.703557"	"56.5"	"100.000"	"70.4964"	"23229"	"23229"	"23210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.7"	""	"66.4"	""	"71.1"	""	"102.1"	"2.2"	"121.3"	"106.0"	""	"1238"	"42"	"37.000"	"30.000"	"0.00395995863163759"	"15"	"0"	"1.773E-05"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06500"	"2481.23818"	"2481.23720"	"0.40"	"0.00025"	"12/166"	"12"	"166"	"3020734.97814941"	"HCD"	"MS2"	"10.01891"	"55.0"	"100.000"	"72.4837"	"23989"	"23989"	"23969"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"65.1"	""	"64.6"	""	"73.1"	""	"96.9"	""	"116.5"	"110.1"	""	"1238"	"48"	"37.000"	"30.000"	"0.000985577202044674"	"15"	"0"	"8.143E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75092"	"2481.23819"	"2481.23720"	"0.40"	"0.00033"	"20/166"	"20"	"166"	"5413680.81268311"	"HCD"	"MS2"	"0"	"118.0"	"100.000"	"71.3536"	"23527"	"23527"	"23507"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"135.4"	""	"129.0"	""	"138.3"	""	"201.1"	"1.3"	"258.0"	"258.5"	""	"1239"	"70"	"37.000"	"30.000"	"5.835006050459E-06"	"17"	"0"	"6.659E-07"	"1.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12280"	"2481.23833"	"2481.23720"	"0.46"	"0.00057"	"7/166"	"7"	"166"	"91700.4843139648"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"72.4672"	"23983"	"23983"	"23953"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.5"	""	"6.5"	""	"8.4"	""	"14.0"	""	"9.0"	"13.9"	""	"1240"	"11"	"37.000"	"30.000"	"5.46250301264969"	"13"	"0.0006737"	"0.006448"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75098"	"2481.23838"	"2481.23720"	"0.48"	"0.00039"	"17/166"	"17"	"166"	"6295237.70111084"	"HCD"	"MS2"	"1.041205"	"150.6"	"94.228"	"71.6576"	"23652"	"23652"	"23635"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"176.3"	""	"165.0"	""	"162.4"	""	"278.9"	""	"335.6"	"313.3"	""	"1241"	"71"	"37.000"	"30.000"	"5.10201564292159E-06"	"17"	"0"	"1.479E-07"	"1.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1241.12292"	"2481.23857"	"2481.23720"	"0.55"	"0.00069"	"5/166"	"5"	"166"	"105000.451171875"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"73.0832"	"24286"	"24286"	"24255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.2"	""	"4.6"	""	"4.1"	""	"9.6"	""	"10.2"	"6.9"	""	"1254"	"7"	"37.000"	"30.000"	"12.8607868612363"	"13"	"0.001217"	"0.01867"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"827.75104"	"2481.23856"	"2481.23720"	"0.55"	"0.00045"	"9/166"	"9"	"166"	"387766.647277832"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"80.7817"	"27415"	"27415"	"27390"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.8"	""	"15.7"	""	"17.9"	""	"22.0"	"1.1"	"33.2"	"30.5"	""	"1254"	"48"	"37.000"	"30.000"	"0.000977839419272499"	"20"	"0"	"5.081E-06"	"1.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9853"	"0.0000"	"1"	"1"	"1"	"827.75104"	"2481.23856"	"2481.23720"	"0.55"	"0.00045"	"18/166"	"18"	"166"	"4942067.44604492"	"HCD"	"MS2"	"0"	"100.4"	"100.000"	"72.9446"	"24178"	"24178"	"24161"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"123.6"	""	"107.6"	""	"110.6"	""	"167.3"	""	"229.1"	"217.2"	""	"1254"	"68"	"37.000"	"30.000"	"1.05018918326857E-05"	"18"	"0"	"6.548E-07"	"1.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"621.06512"	"2481.23867"	"2481.23720"	"0.59"	"0.00037"	"14/166"	"14"	"166"	"1970633.48590088"	"HCD"	"MS2"	"10.75693"	"37.8"	"100.000"	"74.8198"	"24994"	"24994"	"24975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.5"	""	"45.5"	""	"44.9"	""	"61.4"	""	"82.5"	"74.8"	""	"1253"	"34"	"37.000"	"30.000"	"0.02523022220049"	"17"	"0"	"2.576E-05"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9853"	"0.0000"	"1"	"1"	"1"	"827.75110"	"2481.23874"	"2481.23720"	"0.62"	"0.00052"	"19/166"	"19"	"166"	"2613151.46936035"	"HCD"	"MS2"	"0"	"58.1"	"100.000"	"75.9653"	"25410"	"25410"	"25393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.3"	""	"62.5"	""	"72.6"	""	"104.5"	""	"120.8"	"118.8"	""	"1253"	"68"	"37.000"	"30.000"	"9.92935585076887E-06"	"18"	"0"	"9.51E-07"	"1.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75110"	"2481.23874"	"2481.23720"	"0.62"	"0.00052"	"17/166"	"17"	"166"	"4264005.39770508"	"HCD"	"MS2"	"3.307094"	"102.1"	"100.000"	"74.3468"	"24801"	"24801"	"24783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.9"	""	"112.3"	""	"133.2"	""	"170.7"	""	"219.8"	"226.1"	""	"1253"	"75"	"37.000"	"30.000"	"1.83620461814933E-06"	"17"	"0"	"8.11E-07"	"1.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75110"	"2481.23874"	"2481.23720"	"0.62"	"0.00052"	"19/166"	"19"	"166"	"5229594.98669434"	"HCD"	"MS2"	"0"	"109.0"	"100.000"	"72.5964"	"24035"	"24035"	"24017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"133.6"	""	"124.0"	""	"135.0"	""	"160.8"	""	"247.6"	"238.6"	""	"1253"	"66"	"37.000"	"30.000"	"1.48566562659703E-05"	"17"	"0"	"3.574E-07"	"1.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"827.75116"	"2481.23893"	"2481.23720"	"0.70"	"0.00058"	"17/166"	"17"	"166"	"2599519.59869385"	"HCD"	"MS2"	"0"	"61.0"	"100.000"	"75.5450"	"25238"	"25238"	"25217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.8"	""	"65.6"	""	"75.7"	""	"111.4"	""	"119.2"	"135.1"	""	"1250"	"76"	"37.000"	"30.000"	"1.57354807984929E-06"	"25"	"0"	"5.323E-07"	"1.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"827.75116"	"2481.23893"	"2481.23720"	"0.70"	"0.00058"	"21/166"	"21"	"166"	"3475282.77301025"	"HCD"	"MS2"	"1.751814"	"75.0"	"100.000"	"68.3488"	"22301"	"22301"	"22282"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"70.2"	""	"69.0"	""	"66.9"	""	"201.5"	"2.0"	"160.4"	"142.8"	""	"1250"	"61"	"37.000"	"30.000"	"4.64386961185439E-05"	"20"	"0"	"4.25E-07"	"1.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75116"	"2481.23893"	"2481.23720"	"0.70"	"0.00058"	"19/166"	"19"	"166"	"4846123.43707275"	"HCD"	"MS2"	"0"	"98.5"	"100.000"	"66.2824"	"21466"	"21466"	"21449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"99.5"	""	"84.2"	""	"102.9"	""	"231.2"	"2.3"	"217.7"	"198.7"	""	"1250"	"75"	"37.000"	"30.000"	"2.21758368270985E-06"	"17"	"0"	"5.513E-07"	"1.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75116"	"2481.23893"	"2481.23720"	"0.70"	"0.00058"	"20/166"	"20"	"166"	"5319515.3805542"	"HCD"	"MS2"	"0"	"108.2"	"100.000"	"71.0352"	"23397"	"23397"	"23379"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"134.5"	""	"119.7"	""	"119.5"	""	"176.3"	""	"232.5"	"248.3"	""	"1250"	"71"	"37.000"	"30.000"	"4.66530474006293E-06"	"17"	"0"	"1.401E-06"	"1.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9865"	"0.0000"	"1"	"1"	"1"	"827.75116"	"2481.23893"	"2481.23720"	"0.70"	"0.00058"	"19/166"	"19"	"166"	"5999026.25152588"	"HCD"	"MS2"	"0.7797849"	"121.9"	"100.000"	"73.0096"	"24256"	"24256"	"24239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"159.2"	""	"127.3"	""	"145.8"	""	"209.0"	"0.7"	"257.4"	"258.4"	""	"1250"	"74"	"37.000"	"30.000"	"2.5344283465524E-06"	"18"	"0"	"2.895E-07"	"1.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06519"	"2481.23891"	"2481.23720"	"0.69"	"0.00043"	"8/166"	"8"	"166"	"1868078.87316895"	"HCD"	"MS2"	"9.100682"	"38.4"	"100.000"	"74.8759"	"24965"	"24965"	"24945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.6"	""	"40.1"	""	"42.8"	""	"75.3"	"1.0"	"77.5"	"78.8"	""	"1250"	"36"	"37.000"	"30.000"	"0.0149238205182074"	"15"	"0"	"1.458E-05"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75122"	"2481.23911"	"2481.23720"	"0.77"	"0.00064"	"16/166"	"16"	"166"	"2910613.40765381"	"HCD"	"MS2"	"5.222293"	"87.3"	"100.000"	"69.0086"	"22571"	"22571"	"22554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"95.8"	""	"94.9"	""	"103.4"	""	"173.1"	""	"185.3"	"183.6"	""	"1252"	"70"	"37.000"	"30.000"	"6.08939762084379E-06"	"17"	"0"	"4.18E-07"	"1.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"827.75122"	"2481.23911"	"2481.23720"	"0.77"	"0.00064"	"20/166"	"20"	"166"	"5461692.75457764"	"HCD"	"MS2"	"0"	"116.4"	"100.000"	"66.5961"	"21594"	"21594"	"21577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.5"	""	"109.6"	""	"123.8"	""	"307.2"	""	"225.4"	"220.2"	""	"1252"	"74"	"37.000"	"30.000"	"2.27810812615632E-06"	"21"	"0"	"5.152E-07"	"1.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06525"	"2481.23916"	"2481.23720"	"0.79"	"0.00049"	"13/166"	"13"	"166"	"3350454.30334473"	"HCD"	"MS2"	"6.953683"	"59.4"	"100.000"	"71.4340"	"23560"	"23560"	"23539"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.9"	""	"63.7"	""	"72.8"	""	"80.8"	""	"169.2"	"110.8"	""	"1250"	"51"	"37.000"	"30.000"	"0.00054560710524257"	"16"	"0"	"1.307E-05"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"827.75128"	"2481.23929"	"2481.23720"	"0.84"	"0.00070"	"7/166"	"7"	"166"	"203794.200195313"	"HCD"	"MS2"	"16.46941"	"8.3"	"100.000"	"81.9614"	"27896"	"27896"	"27870"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.2"	""	"9.0"	""	"11.0"	""	"11.7"	""	"19.0"	"16.4"	""	"1249"	"52"	"37.000"	"30.000"	"0.000403211066032143"	"20"	"0"	"4.606E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9846"	"0.0000"	"1"	"1"	"1"	"827.75128"	"2481.23929"	"2481.23720"	"0.84"	"0.00070"	"19/166"	"19"	"166"	"5056768.44750977"	"HCD"	"MS2"	"0.3963635"	"104.2"	"100.000"	"70.6074"	"23275"	"23275"	"23258"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.0"	""	"115.0"	""	"120.8"	""	"179.9"	""	"226.3"	"224.1"	""	"1249"	"65"	"37.000"	"30.000"	"2.11121490210636E-05"	"17"	"0"	"1.945E-06"	"1.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9783"	"0.0000"	"1"	"1"	"1"	"827.75134"	"2481.23948"	"2481.23720"	"0.92"	"0.00076"	"10/166"	"10"	"166"	"445982.693664551"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"80.6692"	"27318"	"27318"	"27296"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.3"	""	"16.5"	""	"19.1"	""	"23.6"	"1.9"	"32.5"	"30.4"	""	"1259"	"46"	"37.000"	"31.000"	"0.00154168531074127"	"17"	"0"	"9.825E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75140"	"2481.23966"	"2481.23720"	"0.99"	"0.00082"	"10/166"	"10"	"166"	"2023924.51916504"	"HCD"	"MS2"	"32.99289"	"53.1"	"100.000"	"78.5832"	"26467"	"26467"	"26449"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.6"	""	"69.8"	""	"72.4"	""	"78.6"	""	"123.8"	"103.9"	""	"1259"	"55"	"37.000"	"31.000"	"0.000210860743949852"	"16"	"0"	"2.875E-06"	"1.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06537"	"2481.23964"	"2481.23720"	"0.99"	"0.00061"	"13/166"	"13"	"166"	"22022369.5869141"	"HCD"	"MS2"	"0.5092983"	"83.9"	"26.448"	"65.9073"	"21365"	"21365"	"21347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.1"	""	"61.5"	""	"83.4"	""	"217.8"	""	"182.8"	"172.8"	""	"1259"	"55"	"37.000"	"31.000"	"0.000184925045590978"	"16"	"0"	"8.818E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"0.9608"	"0.0000"	"1"	"1"	"1"	"621.06537"	"2481.23964"	"2481.23720"	"0.99"	"0.00061"	"16/166"	"16"	"166"	"22417347.5515137"	"HCD"	"MS2"	"0"	"85.7"	"27.484"	"66.0078"	"21354"	"21354"	"21337"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"80.2"	""	"64.2"	""	"86.0"	""	"222.2"	"2.1"	"188.0"	"172.8"	""	"1259"	"51"	"37.000"	"31.000"	"0.000508154451541644"	"18"	"0"	"8.144E-06"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9857"	"0.0000"	"1"	"1"	"1"	"827.75146"	"2481.23984"	"2481.23720"	"1.07"	"0.00088"	"19/166"	"19"	"166"	"3029161.54846191"	"HCD"	"MS2"	"2.462418"	"75.0"	"100.000"	"68.6949"	"22443"	"22443"	"22426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.3"	""	"81.5"	""	"87.9"	""	"150.9"	""	"152.5"	"151.8"	""	"1263"	"70"	"38.000"	"31.000"	"5.7992703467938E-06"	"18"	"0"	"3.386E-06"	"1.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9467"	"0.0000"	"1"	"1"	"1"	"827.75153"	"2481.24002"	"2481.23720"	"1.14"	"0.00094"	"16/166"	"16"	"166"	"1048569.30438232"	"HCD"	"MS2"	"0"	"36.5"	"100.000"	"64.1834"	"20661"	"20661"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.7"	""	"34.4"	""	"40.6"	""	"82.0"	"1.2"	"78.9"	"66.0"	""	"1271"	"75"	"38.000"	"31.000"	"1.93693726590858E-06"	"21"	"0"	"6.028E-07"	"1.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9867"	"0.0000"	"1"	"1"	"1"	"827.75153"	"2481.24002"	"2481.23720"	"1.14"	"0.00094"	"17/166"	"17"	"166"	"4970786.27868652"	"HCD"	"MS2"	"0.5323538"	"113.6"	"100.000"	"73.8860"	"24562"	"24562"	"24545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"141.8"	""	"125.9"	""	"118.2"	""	"186.6"	""	"253.0"	"256.9"	""	"1271"	"75"	"38.000"	"31.000"	"2.18834381000102E-06"	"18"	"0"	"2.925E-06"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9861"	"0.0000"	"1"	"1"	"1"	"827.75159"	"2481.24021"	"2481.23720"	"1.21"	"0.00100"	"21/166"	"21"	"166"	"5172965.81304932"	"HCD"	"MS2"	"0"	"114.0"	"100.000"	"73.2584"	"24306"	"24306"	"24289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"136.6"	""	"133.9"	""	"125.7"	""	"204.0"	"1.2"	"248.3"	"234.0"	""	"1273"	"72"	"38.000"	"31.000"	"3.86187673783083E-06"	"18"	"0"	"1.753E-06"	"1.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75165"	"2481.24039"	"2481.23720"	"1.29"	"0.00106"	"19/166"	"19"	"166"	"3982203.03027344"	"HCD"	"MS2"	"1.110291"	"88.2"	"100.000"	"74.8316"	"24947"	"24947"	"24929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.2"	""	"108.2"	""	"103.1"	""	"138.1"	""	"192.0"	"192.2"	""	"1271"	"65"	"38.000"	"31.000"	"2.04698921686062E-05"	"17"	"0"	"1.275E-06"	"1.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"827.75171"	"2481.24057"	"2481.23720"	"1.36"	"0.00113"	"10/166"	"10"	"166"	"140524.907104492"	"HCD"	"MS2"	"13.85903"	"6.0"	"100.000"	"84.6012"	"28922"	"28922"	"28892"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.1"	""	"7.1"	""	"9.1"	""	"8.8"	""	"10.6"	"13.8"	""	"1273"	"26"	"38.000"	"31.000"	"0.160989817473797"	"16"	"0.0001889"	"0.0006472"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75177"	"2481.24076"	"2481.23720"	"1.43"	"0.00119"	"18/166"	"18"	"166"	"5211771.74969482"	"HCD"	"MS2"	"0"	"116.1"	"100.000"	"73.9112"	"24624"	"24624"	"24607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"144.2"	""	"122.1"	""	"131.2"	""	"192.3"	""	"258.5"	"257.4"	""	"1273"	"66"	"38.000"	"31.000"	"1.51285884243673E-05"	"17"	"0"	"6.133E-07"	"1.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.06567"	"2481.24087"	"2481.23720"	"1.48"	"0.00092"	"12/166"	"12"	"166"	"2472271.04882813"	"HCD"	"MS2"	"19.16234"	"45.5"	"100.000"	"73.9781"	"24599"	"24599"	"24577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.2"	""	"48.3"	""	"59.2"	""	"76.9"	"0.7"	"94.2"	"93.0"	""	"1272"	"40"	"38.000"	"31.000"	"0.00569451990889542"	"15"	"0"	"5.554E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75189"	"2481.24112"	"2481.23720"	"1.58"	"0.00131"	"16/166"	"16"	"166"	"1620545.20465088"	"HCD"	"MS2"	"6.492584"	"45.1"	"100.000"	"68.0268"	"22221"	"22221"	"22202"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.8"	""	"51.9"	""	"53.8"	""	"78.8"	"1.8"	"94.4"	"85.8"	""	"1275"	"70"	"38.000"	"31.000"	"6.84668250367545E-06"	"17"	"0"	"7.287E-07"	"1.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75226"	"2481.24222"	"2481.23720"	"2.02"	"0.00167"	"7/166"	"7"	"166"	"107166.49005127"	"HCD"	"MS2"	"22.66779"	"5.9"	"100.000"	"84.5614"	"28957"	"28957"	"28929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.8"	""	"6.5"	""	"11.2"	""	"6.6"	""	"9.9"	"12.6"	""	"1272"	"14"	"38.000"	"31.000"	"2.64519148274198"	"13"	"0.0006396"	"0.006197"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"827.75232"	"2481.24240"	"2481.23720"	"2.10"	"0.00174"	"6/166"	"6"	"166"	"124447.290710449"	"HCD"	"MS2"	"20.15653"	"5.0"	"100.000"	"86.0944"	"29523"	"29523"	"29505"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.0"	""	"6.5"	""	"8.7"	""	"9.7"	""	"6.3"	"9.4"	""	"1274"	"15"	"38.000"	"31.000"	"1.95947367098983"	"17"	"0.0006037"	"0.005989"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75232"	"2481.24240"	"2481.23720"	"2.10"	"0.00174"	"17/166"	"17"	"166"	"4065055.33947754"	"HCD"	"MS2"	"2.33981"	"98.3"	"100.000"	"74.3566"	"24754"	"24754"	"24737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"114.0"	""	"98.6"	""	"122.7"	""	"162.4"	""	"231.3"	"207.5"	""	"1274"	"75"	"38.000"	"31.000"	"1.8626850646862E-06"	"18"	"0"	"3.189E-07"	"1.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"1241.12488"	"2481.24248"	"2481.23720"	"2.13"	"0.00264"	"7/166"	"7"	"166"	"82466.0626220703"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"71.5306"	"23600"	"23600"	"23571"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"5.2"	""	"5.6"	""	"9.0"	""	"9.4"	"12.9"	""	"1274"	"16"	"38.000"	"31.000"	"1.50709084729843"	"14"	"0.002361"	"0.03442"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"827.75330"	"2481.24533"	"2481.23720"	"3.28"	"0.00271"	"19/166"	"19"	"166"	"96734579.7060547"	"HCD"	"MS2"	"0"	"113.4"	"6.148"	"65.9686"	"21338"	"21338"	"21321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.4"	""	"97.7"	""	"115.5"	""	"301.4"	""	"235.9"	"231.1"	""	"1289"	"65"	"38.000"	"31.000"	"1.8587583037651E-05"	"20"	"0"	"2E-06"	"1.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75336"	"2481.24552"	"2481.23720"	"3.35"	"0.00277"	"6/166"	"6"	"166"	"150296.788879395"	"HCD"	"MS2"	"25.7726"	"6.4"	"100.000"	"86.1983"	"29617"	"29617"	"29596"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.5"	""	"9.2"	""	"9.9"	""	"5.8"	""	"12.2"	"13.3"	""	"1286"	"16"	"38.000"	"31.000"	"1.67961975087869"	"14"	"0.0002277"	"0.001269"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGNPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.75427"	"2481.24826"	"2481.23720"	"4.46"	"0.00369"	"20/166"	"20"	"166"	"54699005.0063477"	"HCD"	"MS2"	"0"	"108.6"	"10.297"	"65.9028"	"21364"	"21364"	"21347"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"101.1"	""	"84.7"	""	"90.3"	""	"276.7"	""	"243.7"	"237.9"	""	"1318"	"71"	"38.000"	"31.000"	"4.88523449017305E-06"	"17"	"0"	"3.377E-06"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGMGSASEMLAALAVESAGVK"	"[R].sGGMGSASEMLAALAVESAGVk.[V]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.77380"	"2481.30686"	"2481.30932"	"-0.99"	"-0.00082"	"12/202"	"12"	"202"	"320260.613769531"	"HCD"	"MS2"	"18.15095"	"12.4"	"100.000"	"84.2344"	"28823"	"28823"	"28801"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.4"	""	"17.0"	""	"14.0"	""	"17.5"	""	"28.9"	"25.4"	""	"1504"	"21"	"38.000"	"31.000"	"0.595961000521315"	"14"	"0"	"0.000138"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGMGSASEMLAALAVESAGVK"	"[R].sGGMGSASEMLAALAVESAGVk.[V]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"827.77515"	"2481.31089"	"2481.30932"	"0.63"	"0.00052"	"16/202"	"16"	"202"	"407206.599243164"	"HCD"	"MS2"	"10.70949"	"13.7"	"100.000"	"84.0529"	"28698"	"28698"	"28676"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.3"	""	"14.3"	""	"15.3"	""	"26.0"	""	"33.5"	"28.1"	""	"1520"	"41"	"38.000"	"31.000"	"0.00669597143486091"	"16"	"0"	"7.442E-06"	"1.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSQPFQVAEVFTGHMGK"	"[R].fLSQPFQVAEVFTGHMGk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.78314"	"2481.33487"	"2481.33646"	"-0.64"	"-0.00053"	"15/184"	"15"	"184"	"2042348.12731934"	"HCD"	"MS2"	"32.08521"	"53.8"	"100.000"	"79.2790"	"26802"	"26802"	"26783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"63.3"	""	"66.2"	""	"76.3"	""	"75.3"	"1.1"	"109.4"	"119.6"	""	"1469"	"28"	"38.000"	"31.000"	"0.103990053137848"	"14"	"0"	"3.715E-05"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSQPFQVAEVFTGHMGK"	"[R].fLSQPFQVAEVFTGHMGk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.78436"	"2481.33854"	"2481.33646"	"0.84"	"0.00069"	"14/184"	"14"	"184"	"1936853.66131592"	"HCD"	"MS2"	"22.33315"	"52.6"	"100.000"	"79.3632"	"26786"	"26786"	"26769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.2"	""	"70.0"	""	"76.0"	""	"73.7"	""	"110.7"	"118.6"	""	"1445"	"13"	"38.000"	"31.000"	"3.3253537441253"	"13"	"0"	"0.0001221"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELVPPTLGEIPTAIQSMK"	"[R].vELVPPTLGEIPTAIQSMk.[S]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.11475"	"2481.43715"	"2481.44025"	"-1.25"	"-0.00077"	"10/180"	"10"	"180"	"456801.148986816"	"HCD"	"MS2"	"9.85421"	"11.7"	"100.000"	"85.6770"	"29359"	"29359"	"29336"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.9"	""	"16.6"	""	"12.1"	""	"16.5"	""	"26.6"	"21.2"	""	"690"	"34"	"35.000"	"28.000"	"0.0150251596421521"	"15"	"0.0001859"	"0.0003609"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELVPPTLGEIPTAIQSMK"	"[R].vELVPPTLGEIPTAIQSMk.[S]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.81787"	"2481.43906"	"2481.44025"	"-0.48"	"-0.00040"	"16/180"	"16"	"180"	"971464.219299316"	"HCD"	"MS2"	"2.308824"	"22.4"	"100.000"	"85.8714"	"29485"	"29485"	"29467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.3"	""	"28.8"	""	"32.0"	""	"26.5"	""	"48.8"	"45.2"	""	"676"	"42"	"35.000"	"28.000"	"0.00221777100010382"	"15"	"0"	"2.514E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELVPPTLGEIPTAIQSMK"	"[R].vELVPPTLGEIPTAIQSMk.[S]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.81799"	"2481.43943"	"2481.44025"	"-0.33"	"-0.00028"	"13/180"	"13"	"180"	"1117601.4708252"	"HCD"	"MS2"	"2.443978"	"27.2"	"100.000"	"85.7941"	"29402"	"29402"	"29384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.5"	""	"31.7"	""	"36.1"	""	"40.0"	""	"54.6"	"56.0"	""	"677"	"52"	"35.000"	"28.000"	"0.000195685512046836"	"16"	"0"	"2.351E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELVPPTLGEIPTAIQSMK"	"[R].vELVPPTLGEIPTAIQSMk.[S]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"4"	"4"	"0.9643"	"0.0000"	"1"	"1"	"1"	"621.11542"	"2481.43984"	"2481.44025"	"-0.17"	"-0.00010"	"10/180"	"10"	"180"	"473471.997497559"	"HCD"	"MS2"	"4.849205"	"11.8"	"100.000"	"85.7784"	"29448"	"29448"	"29421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.3"	""	"20.8"	""	"14.9"	""	"14.8"	""	"25.3"	"22.2"	""	"668"	"28"	"35.000"	"28.000"	"0.0547956984248646"	"15"	"0.0001889"	"0.0007428"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPK"	"[R].yFDSFGDLSSASAImGnPk.[V]"	"N-Term(TMT6plex); M15(Oxidation); N17(Deamidated); K19(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"828.08130"	"2482.22934"	"2482.22121"	"3.28"	"0.00271"	"9/166"	"9"	"166"	"1436770.66308594"	"HCD"	"MS2"	"35.69887"	"53.1"	"100.000"	"67.2867"	"21920"	"21920"	"21906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"68.8"	""	"76.9"	""	"81.8"	""	"77.0"	""	"102.0"	"96.4"	""	"1185"	"26"	"37.000"	"30.000"	"0.14780473757137"	"14"	"0"	"0.000103"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPLEGLVQSELMQLPSGK"	"[R].sIPLEGLVQSELMQLPSGk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q505J8"	"Phenylalanine--tRNA ligase alpha subunit OS=Rattus norvegicus OX=10116 GN=Farsa PE=1 SV=1"	"Q505J8"	"Phenylalanine--tRNA ligase alpha subunit OS=Rattus norvegicus OX=10116 GN=Farsa PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"828.80865"	"2484.41141"	"2484.41477"	"-1.35"	"-0.00112"	"4/196"	"4"	"196"	"87274.0239868164"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"89.9347"	"31013"	"31013"	"30996"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.4"	""	"3.1"	""	"3.9"	""	"4.9"	""	"5.0"	"5.1"	""	"895"	"12"	"36.000"	"29.000"	"2.53976210920325"	"13"	"0.0005564"	"0.003293"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPLEGLVQSELMQLPSGK"	"[R].sIPLEGLVQSELMQLPSGk.[V]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q505J8"	"Phenylalanine--tRNA ligase alpha subunit OS=Rattus norvegicus OX=10116 GN=Farsa PE=1 SV=1"	"Q505J8"	"Phenylalanine--tRNA ligase alpha subunit OS=Rattus norvegicus OX=10116 GN=Farsa PE=1 SV=1"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"828.80975"	"2484.41471"	"2484.41477"	"-0.02"	"-0.00002"	"5/196"	"5"	"196"	"76911.9317016602"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"90.0639"	"31095"	"31095"	"31081"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.6"	""	"2.5"	""	"2.8"	""	"4.2"	""	"7.7"	"5.6"	""	"894"	"6"	"36.000"	"29.000"	"10.5270702990152"	"18"	"0.000523"	"0.003014"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEMAVPDVHLPDIQLPK"	"[K].iPEmAVPDVHLPDIqLPk.[V]"	"N-Term(TMT6plex); M4(Oxidation); Q15(Deamidated); K18(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"829.80872"	"2487.41159"	"2487.39330"	"7.35"	"0.00610"	"12/162"	"12"	"162"	"402973.407592773"	"HCD"	"MS2"	"54.56534"	"15.4"	"100.000"	"69.8278"	"22957"	"22957"	"22929"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.7"	""	"19.4"	""	"14.8"	""	"33.0"	""	"37.4"	"24.0"	""	"865"	"24"	"36.000"	"29.000"	"0.159215781100395"	"15"	"0.000523"	"0.003255"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDPAFVAPLLQAPALVAPK"	"[R].lVDPAFVAPLLQAPALVAPk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P51870"	"Cytochrome P450 4F5 OS=Rattus norvegicus OX=10116 GN=Cyp4f5 PE=2 SV=1"	"P51870"	"Cytochrome P450 4F5 OS=Rattus norvegicus OX=10116 GN=Cyp4f5 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.18152"	"2488.53000"	"2488.53072"	"-0.29"	"-0.00024"	"10/168"	"10"	"168"	"179887.757385254"	"HCD"	"MS2"	"13.16088"	"2.7"	"100.000"	"97.6868"	"33527"	"33527"	"33520"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"4.4"	""	"6.1"	""	"5.6"	""	"4.7"	"4.6"	""	"154"	"23"	"28.000"	"21.000"	"0.0404101744392325"	"14"	"0.0001889"	"0.0005564"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDPAFVAPLLQAPALVAPK"	"[R].lVDPAFVAPLLQAPALVAPk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P51870"	"Cytochrome P450 4F5 OS=Rattus norvegicus OX=10116 GN=Cyp4f5 PE=2 SV=1"	"P51870"	"Cytochrome P450 4F5 OS=Rattus norvegicus OX=10116 GN=Cyp4f5 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.18176"	"2488.53073"	"2488.53072"	"0.00"	"0.00000"	"11/168"	"11"	"168"	"157247.36138916"	"HCD"	"MS2"	"8.038692"	"3.3"	"100.000"	"97.5251"	"33475"	"33475"	"33470"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.9"	""	"7.2"	""	"5.5"	""	"3.4"	""	"5.3"	"7.5"	""	"152"	"42"	"28.000"	"21.000"	"0.000524582250918584"	"15"	"0.0001859"	"0.0003389"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVNVPFMNFLTEDGFEK"	"[R].gSVNVPFMNFLTEDGFEk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"5"	"830.43140"	"2489.27964"	"2489.27867"	"0.39"	"0.00032"	"5/194"	"5"	"194"	"85751.5324707031"	"HCD"	"MS2"	"4.531219"	"3.7"	"100.000"	"89.3059"	"30812"	"30812"	"30799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.9"	""	"4.5"	""	"4.8"	""	"3.6"	""	"8.2"	"6.0"	""	"1462"	"6"	"38.000"	"31.000"	"16.9401548912696"	"15"	"0.0008453"	"0.008292"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVNVPFMNFLTEDGFEK"	"[R].gSVNVPFMNFLTEDGFEk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"830.43140"	"2489.27964"	"2489.27867"	"0.39"	"0.00032"	"9/194"	"9"	"194"	"99358.6929931641"	"HCD"	"MS2"	"5.29378"	"4.3"	"100.000"	"89.5768"	"30873"	"30873"	"30857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.3"	""	"3.1"	""	"7.5"	""	"7.1"	""	"8.2"	"6.5"	""	"1462"	"13"	"38.000"	"31.000"	"3.32596271969685"	"16"	"0.0005564"	"0.003475"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVNVPFMNFLTEDGFEK"	"[R].gSVNVPFMNFLTEDGFEk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"830.43140"	"2489.27964"	"2489.27867"	"0.39"	"0.00032"	"7/194"	"7"	"194"	"147399.746520996"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"89.5970"	"30919"	"30919"	"30908"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.7"	""	"7.7"	""	"13.7"	""	"5.3"	""	"12.3"	"7.0"	""	"1462"	"24"	"38.000"	"31.000"	"0.270967607623063"	"17"	"0.0001889"	"0.0004509"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVNVPFMNFLTEDGFEK"	"[R].gSVNVPFMNFLTEDGFEk.[S]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"830.43243"	"2489.28275"	"2489.27867"	"1.64"	"0.00136"	"9/194"	"9"	"194"	"110895.326782227"	"HCD"	"MS2"	"3.336567"	"5.6"	"100.000"	"89.2133"	"30735"	"30735"	"30719"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.5"	""	"6.8"	""	"11.7"	""	"6.0"	""	"12.7"	"5.7"	""	"1481"	"21"	"38.000"	"31.000"	"0.542656566789358"	"18"	"0.0004557"	"0.002602"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQASPLLLPAPSQVPQLLGR"	"[R].eFQASPLLLPAPSQVPQLLGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.81348"	"2490.42588"	"2490.42816"	"-0.92"	"-0.00076"	"13/220"	"13"	"220"	"185790.818359375"	"HCD"	"MS2"	"52.95215"	"4.2"	"100.000"	"83.3818"	"28476"	"28476"	"28445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.2"	""	"3.0"	""	"6.0"	""	"7.7"	""	"10.9"	"3.9"	""	"757"	"30"	"35.000"	"28.000"	"0.0420790458776082"	"14"	"0"	"8.146E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQASPLLLPAPSQVPQLLGR"	"[R].eFQASPLLLPAPSQVPQLLGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"830.81384"	"2490.42698"	"2490.42816"	"-0.48"	"-0.00040"	"12/220"	"12"	"220"	"217833.822631836"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"83.3779"	"28423"	"28423"	"28398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.9"	""	"4.5"	""	"7.3"	""	"9.5"	""	"8.2"	"9.7"	""	"734"	"26"	"35.000"	"28.000"	"0.0926117443500371"	"16"	"0.0001308"	"0.0002301"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRPEDITQIQPQQLLLK"	"[K].lRPEDITQIQPQQLLLk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"831.17114"	"2491.49887"	"2491.50121"	"-0.94"	"-0.00078"	"16/164"	"16"	"164"	"2282130.77172852"	"HCD"	"MS2"	"14.88317"	"66.5"	"100.000"	"68.0732"	"22240"	"22240"	"22218"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"81.0"	""	"77.5"	""	"66.7"	""	"121.9"	""	"140.8"	"144.5"	""	"322"	"33"	"32.000"	"25.000"	"0.00839123484879179"	"16"	"0"	"5.794E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRPEDITQIQPQQLLLK"	"[K].lRPEDITQIQPQQLLLk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"831.17145"	"2491.49979"	"2491.50121"	"-0.57"	"-0.00047"	"13/164"	"13"	"164"	"1911588.78283691"	"HCD"	"MS2"	"11.6981"	"56.6"	"100.000"	"68.2340"	"22254"	"22254"	"22234"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.6"	""	"59.8"	""	"65.6"	""	"101.9"	""	"118.5"	"132.3"	""	"323"	"35"	"32.000"	"25.000"	"0.00529873898377686"	"17"	"0"	"4.788E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGLDQVAGMSETALPGAFK"	"[R].iIGLDQVAGmSETALPGAFk.[T]"	"N-Term(TMT6plex); M10(Oxidation); K20(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"4"	"4"	"0.7857"	"0.0000"	"1"	"1"	"1"	"623.85083"	"2492.38149"	"2492.38347"	"-0.79"	"-0.00049"	"14/196"	"14"	"196"	"901795.165039063"	"HCD"	"MS2"	"28.20063"	"26.1"	"100.000"	"74.2641"	"24716"	"24716"	"24689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.7"	""	"29.9"	""	"37.6"	""	"60.5"	""	"50.2"	"41.0"	""	"1115"	"42"	"37.000"	"30.000"	"0.0034613448658326"	"24"	"0"	"4.637E-06"	"1.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGLDQVAGMSETALPGAFK"	"[R].iIGLDQVAGmSETALPGAFk.[T]"	"N-Term(TMT6plex); M10(Oxidation); K20(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"831.46594"	"2492.38327"	"2492.38347"	"-0.08"	"-0.00006"	"16/196"	"16"	"196"	"1317254.00244141"	"HCD"	"MS2"	"10.88151"	"37.5"	"100.000"	"74.2434"	"24707"	"24707"	"24689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.7"	""	"45.5"	""	"40.5"	""	"118.9"	""	"67.9"	"57.2"	""	"1095"	"58"	"37.000"	"30.000"	"8.77776851402797E-05"	"26"	"0"	"7.176E-07"	"1.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGLDQVAGMSETALPGAFK"	"[R].iIGLDQVAGmSETALPGAFk.[T]"	"N-Term(TMT6plex); M10(Oxidation); K20(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.8246"	"0.0000"	"1"	"1"	"1"	"831.46600"	"2492.38346"	"2492.38347"	"0.00"	"0.00000"	"16/196"	"16"	"196"	"1248643.6171875"	"HCD"	"MS2"	"14.1958"	"35.8"	"100.000"	"74.1923"	"24738"	"24738"	"24719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.1"	""	"46.1"	""	"47.1"	""	"99.4"	""	"68.7"	"52.3"	""	"1097"	"57"	"37.000"	"30.000"	"0.0001081873870759"	"26"	"0"	"1.271E-06"	"1.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGLDQVAGMSETALPGAFK"	"[R].iIGLDQVAGmSETALPGAFk.[T]"	"N-Term(TMT6plex); M10(Oxidation); K20(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"4"	"4"	"0.9487"	"0.0000"	"1"	"1"	"1"	"623.85150"	"2492.38418"	"2492.38347"	"0.28"	"0.00018"	"13/196"	"13"	"196"	"723952.160217285"	"HCD"	"MS2"	"22.92039"	"22.7"	"100.000"	"74.3307"	"24795"	"24795"	"24767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.9"	""	"25.7"	""	"28.7"	""	"45.4"	""	"48.9"	"41.6"	""	"1097"	"39"	"37.000"	"30.000"	"0.00660962213293931"	"17"	"0"	"1.086E-05"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPEDPLISGLLNSQALK"	"[R].lLLPEDPLISGLLNSQALk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"831.50714"	"2492.50687"	"2492.51038"	"-1.41"	"-0.00117"	"7/174"	"7"	"174"	"116714.880493164"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"100.2475"	"34237"	"34237"	"34232"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"4.3"	""	"3.6"	""	"5.9"	""	"5.9"	"9.3"	""	"272"	"22"	"31.000"	"24.000"	"0.0862062807309421"	"15"	"0.0004166"	"0.002276"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPEDPLISGLLNSQALK"	"[R].lLLPEDPLISGLLNSQALk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.50787"	"2492.50907"	"2492.51038"	"-0.53"	"-0.00044"	"7/174"	"7"	"174"	"72250.9428100586"	"HCD"	"MS2"	"0"	"0.6"	"100.000"	"100.5169"	"34292"	"34292"	"34290"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	"3.7"	""	"2.4"	""	""	"265"	"8"	"31.000"	"24.000"	"2.09033493235164"	"13"	"0.0001889"	"0.001008"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPEDPLISGLLNSQALK"	"[R].lLLPEDPLISGLLNSQALk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.50897"	"2492.51236"	"2492.51038"	"0.79"	"0.00066"	"10/174"	"10"	"174"	"135392.052062988"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"100.0270"	"34162"	"34162"	"34159"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	"4.6"	""	"6.0"	""	"6.9"	""	"7.2"	"5.8"	""	"254"	"18"	"31.000"	"24.000"	"0.205023536716964"	"14"	"0.0002277"	"0.001128"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLPEDPLISGLLNSQALK"	"[R].lLLPEDPLISGLLNSQALk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.50928"	"2492.51328"	"2492.51038"	"1.16"	"0.00097"	"12/174"	"12"	"174"	"147675.88659668"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"100.2782"	"34220"	"34220"	"34217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.6"	""	"4.2"	""	"3.3"	""	"7.1"	""	"7.3"	"9.3"	""	"248"	"28"	"30.000"	"23.000"	"0.0199720058762106"	"14"	"0.0001308"	"0.0002247"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVVLMSHLGRPDGVPMPDK"	"[K].sVVLMSHLGRPDGVPMPDk.[Y]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"4"	"4"	"0.7778"	"0.0000"	"1"	"1"	"1"	"624.09857"	"2493.37246"	"2493.37219"	"0.11"	"0.00007"	"15/196"	"15"	"196"	"15453286.6459961"	"HCD"	"MS2"	"4.924756"	"193.4"	"62.275"	"47.3485"	"13811"	"13811"	"13794"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"264.7"	""	"274.4"	""	"263.3"	""	"236.1"	"2.3"	"379.7"	"414.4"	""	"1222"	"18"	"37.000"	"30.000"	"1.07409132812876"	"18"	"0"	"1.103E-05"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVVLMSHLGRPDGVPMPDK"	"[K].sVVLMSHLGRPDGVPMPDk.[Y]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.09875"	"2493.37319"	"2493.37219"	"0.40"	"0.00025"	"13/196"	"13"	"196"	"5436622.71350098"	"HCD"	"MS2"	"12.04651"	"149.9"	"100.000"	"47.1471"	"13680"	"13680"	"13656"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"196.2"	""	"203.2"	""	"200.4"	""	"207.5"	""	"293.2"	"324.8"	""	"1221"	"12"	"37.000"	"30.000"	"3.51306081744334"	"13"	"0"	"3.117E-05"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIGLDQVAGMSETALPGAFK"	"[R].iIGLDqVAGmSETALPGAFk.[T]"	"N-Term(TMT6plex); Q6(Deamidated); M10(Oxidation); K20(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"831.81018"	"2493.41599"	"2493.36748"	"19.45"	"0.01617"	"15/196"	"15"	"196"	"556597.784179688"	"HCD"	"MS2"	"9.61002"	"14.6"	"100.000"	"83.7021"	"28606"	"28606"	"28587"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.0"	""	"26.2"	""	"23.7"	""	"18.7"	""	"28.2"	"29.0"	""	"881"	"42"	"36.000"	"29.000"	"0.0026178569587016"	"22"	"0.0001889"	"0.0004151"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNLSDVELIPLPLEPQVK"	"[K].mNLSDVELIPLPLEPQVk.[I]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"831.81805"	"2493.43961"	"2493.44025"	"-0.26"	"-0.00021"	"8/188"	"8"	"188"	"69910.9420776367"	"HCD"	"MS2"	"6.127957"	"1.2"	"100.000"	"90.2902"	"31176"	"31176"	"31166"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.4"	""	"2.3"	""	""	""	""	""	""	"4.6"	""	"712"	"28"	"35.000"	"28.000"	"0.0520535074106592"	"18"	"0.0006396"	"0.006298"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPPLVTLLSGEPEVQYVALR"	"[K].lAPPLVTLLSGEPEVQYVALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.15338"	"2494.44559"	"2494.44823"	"-1.06"	"-0.00088"	"15/184"	"15"	"184"	"335795.465820313"	"HCD"	"MS2"	"1.150743"	"0.8"	"100.000"	"95.8775"	"32997"	"32997"	"32994"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	"4.4"	""	""	"3.9"	""	"652"	"49"	"35.000"	"28.000"	"0.000383899547367783"	"16"	"0"	"5.759E-05"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPPLVTLLSGEPEVQYVALR"	"[K].lAPPLVTLLSGEPEVQYVALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.15344"	"2494.44577"	"2494.44823"	"-0.98"	"-0.00082"	"7/184"	"7"	"184"	"89713.6324462891"	"HCD"	"MS2"	"9.079285"	"0.6"	"100.000"	"95.3626"	"32865"	"32865"	"32862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.0"	""	""	""	""	""	""	""	""	"3.8"	""	"647"	"9"	"35.000"	"28.000"	"3.89829126710277"	"13"	"0.000523"	"0.002862"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPPLVTLLSGEPEVQYVALR"	"[K].lAPPLVTLLSGEPEVQYVALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.15375"	"2494.44669"	"2494.44823"	"-0.62"	"-0.00051"	"13/184"	"13"	"184"	"355190.245422363"	"HCD"	"MS2"	"1.925855"	"1.7"	"100.000"	"95.6216"	"32931"	"32931"	"32927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.4"	""	"2.3"	""	"3.4"	""	"3.3"	"4.9"	""	"639"	"44"	"35.000"	"28.000"	"0.00138506725644815"	"16"	"0"	"2.862E-05"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPPLVTLLSGEPEVQYVALR"	"[K].lAPPLVTLLSGEPEVQYVALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"832.15387"	"2494.44706"	"2494.44823"	"-0.47"	"-0.00039"	"8/184"	"8"	"184"	"95617.1473999023"	"HCD"	"MS2"	"3.149511"	"0.6"	"100.000"	"95.9657"	"33008"	"33008"	"33004"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"2.8"	""	""	""	""	"3.1"	""	"638"	"11"	"35.000"	"28.000"	"2.74025313360221"	"14"	"0.0001889"	"0.0006936"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPPLVTLLSGEPEVQYVALR"	"[K].lAPPLVTLLSGEPEVQYVALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.15387"	"2494.44706"	"2494.44823"	"-0.47"	"-0.00039"	"16/184"	"16"	"184"	"453801.655639648"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"95.7069"	"32931"	"32931"	"32928"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.7"	""	""	""	"1.5"	""	"6.7"	""	"4.1"	""	""	"638"	"50"	"35.000"	"28.000"	"0.000324183333025752"	"16"	"0"	"5.491E-06"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPPLVTLLSGEPEVQYVALR"	"[K].lAPPLVTLLSGEPEVQYVALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.15424"	"2494.44815"	"2494.44823"	"-0.03"	"-0.00002"	"8/184"	"8"	"184"	"146518.057861328"	"HCD"	"MS2"	"8.140443"	"0.3"	"100.000"	"96.1425"	"33067"	"33067"	"33062"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	"2.5"	""	""	""	""	"631"	"10"	"34.000"	"28.000"	"2.99226025171433"	"13"	"0.0003839"	"0.00159"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPPLVTLLSGEPEVQYVALR"	"[K].lAPPLVTLLSGEPEVQYVALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.15436"	"2494.44852"	"2494.44823"	"0.12"	"0.00010"	"16/184"	"16"	"184"	"358921.86505127"	"HCD"	"MS2"	"0.9927975"	"1.1"	"100.000"	"95.4543"	"32862"	"32862"	"32856"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	"4.0"	""	"3.4"	"3.6"	""	"632"	"57"	"34.000"	"28.000"	"6.96124762324892E-05"	"16"	"0"	"2.035E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPPLVTLLSGEPEVQYVALR"	"[K].lAPPLVTLLSGEPEVQYVALR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"P62944"	"AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.15442"	"2494.44870"	"2494.44823"	"0.19"	"0.00016"	"9/184"	"9"	"184"	"81932.4022827148"	"HCD"	"MS2"	"6.328528"	"0.6"	"100.000"	"95.2008"	"32793"	"32793"	"32787"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	"3.5"	""	""	"2.8"	""	"631"	"18"	"34.000"	"28.000"	"0.532107479510148"	"14"	"0.0001859"	"0.000348"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEKAAVNGLWGK"	"[M].vHLTDAEkAAVNGLWGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.86835"	"2496.45156"	"2496.45415"	"-1.04"	"-0.00065"	"11/152"	"11"	"152"	"3257511.1159668"	"HCD"	"MS2"	"56.34745"	"89.0"	"100.000"	"56.1318"	"17378"	"17378"	"17349"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"162.3"	""	"127.8"	""	"125.0"	""	"149.2"	"0.0"	"139.5"	"137.1"	""	"615"	"34"	"34.000"	"27.000"	"0.0136724114746751"	"15"	"0"	"1.049E-06"	"1.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEKAAVNGLWGK"	"[M].vHLTDAEkAAVNGLWGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.86951"	"2496.45620"	"2496.45415"	"0.82"	"0.00051"	"11/152"	"11"	"152"	"3292307.79150391"	"HCD"	"MS2"	"73.11366"	"98.0"	"100.000"	"55.9280"	"17241"	"17241"	"17211"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"165.3"	""	"151.8"	""	"137.9"	""	"156.7"	""	"158.4"	"157.3"	""	"587"	"22"	"34.000"	"27.000"	"0.178487622875304"	"14"	"0"	"2.956E-06"	"1.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVIVPGNGGGDVATHGWYGWVR"	"[K].aVIVPGNGGGDVATHGWYGWVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"833.10333"	"2497.29544"	"2497.29379"	"0.66"	"0.00055"	"8/204"	"8"	"204"	"403391.094055176"	"HCD"	"MS2"	"28.50241"	"31.1"	"100.000"	"58.9102"	"18456"	"18456"	"18425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.5"	""	"40.1"	""	"43.6"	""	"48.5"	"2.3"	"54.4"	"55.1"	""	"1444"	"5"	"38.000"	"31.000"	"20.7270358022182"	"15"	"0.0006037"	"0.004764"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.46851"	"2498.39096"	"2498.39403"	"-1.23"	"-0.00102"	"15/216"	"15"	"216"	"4210324.47485352"	"HCD"	"MS2"	"44.49936"	"88.7"	"100.000"	"73.4453"	"24433"	"24433"	"24415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.5"	""	"126.2"	""	"113.1"	""	"136.9"	""	"162.2"	"160.6"	""	"1106"	"12"	"37.000"	"30.000"	"3.62013804259203"	"13"	"0.0001859"	"0.0003685"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.46857"	"2498.39115"	"2498.39403"	"-1.15"	"-0.00096"	"20/216"	"20"	"216"	"7441011.72021484"	"HCD"	"MS2"	"6.852565"	"143.2"	"100.000"	"72.8273"	"24181"	"24181"	"24159"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"292.1"	""	"238.6"	""	"201.3"	""	"187.8"	"0.4"	"208.5"	"222.5"	""	"1099"	"45"	"37.000"	"30.000"	"0.00188350898707274"	"15"	"0"	"7.232E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.35333"	"2498.39150"	"2498.39403"	"-1.01"	"-0.00063"	"18/216"	"18"	"216"	"7106129.1618042"	"HCD"	"MS2"	"1.553934"	"107.5"	"100.000"	"72.9379"	"24226"	"24226"	"24207"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"228.6"	""	"179.6"	""	"153.7"	""	"137.0"	""	"155.8"	"159.0"	""	"1093"	"57"	"37.000"	"30.000"	"0.000115236528393854"	"16"	"0"	"1.397E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9649"	"0.0000"	"1"	"1"	"1"	"625.35339"	"2498.39174"	"2498.39403"	"-0.92"	"-0.00057"	"17/216"	"17"	"216"	"5056553.29608154"	"HCD"	"MS2"	"1.248664"	"82.6"	"100.000"	"73.2447"	"24352"	"24352"	"24335"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"160.6"	""	"150.1"	""	"114.3"	""	"110.0"	"1.2"	"121.2"	"122.5"	""	"1097"	"57"	"37.000"	"30.000"	"0.000109440137976043"	"18"	"0"	"1.869E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9077"	"0.0000"	"1"	"1"	"1"	"625.35345"	"2498.39199"	"2498.39403"	"-0.82"	"-0.00051"	"20/216"	"20"	"216"	"7217007.49768066"	"HCD"	"MS2"	"2.776711"	"117.1"	"100.000"	"72.9883"	"24195"	"24195"	"24177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"246.9"	""	"206.3"	""	"169.3"	""	"152.1"	"0.3"	"160.8"	"168.5"	""	"1097"	"65"	"37.000"	"30.000"	"1.68335856063255E-05"	"22"	"0"	"8.81E-06"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"1249.70020"	"2498.39311"	"2498.39403"	"-0.37"	"-0.00046"	"12/216"	"12"	"216"	"178940.574584961"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"73.0048"	"24254"	"24254"	"24223"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"22.4"	""	"12.5"	""	"16.4"	""	"8.0"	""	"9.9"	"10.6"	""	"1099"	"43"	"37.000"	"30.000"	"0.00256429329482701"	"19"	"0.0001308"	"0.0002657"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"833.46954"	"2498.39408"	"2498.39403"	"0.02"	"0.00002"	"14/216"	"14"	"216"	"3877791.73291016"	"HCD"	"MS2"	"13.33073"	"78.7"	"100.000"	"73.5330"	"24418"	"24418"	"24401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.6"	""	"99.2"	""	"95.3"	""	"132.8"	""	"152.2"	"168.9"	""	"1102"	"6"	"37.000"	"30.000"	"12.5646848167223"	"19"	"0.0001889"	"0.0005398"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.46960"	"2498.39426"	"2498.39403"	"0.09"	"0.00008"	"20/216"	"20"	"216"	"9592704.16497803"	"HCD"	"MS2"	"3.457488"	"204.9"	"100.000"	"72.9055"	"24162"	"24162"	"24145"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"447.4"	""	"350.7"	""	"276.8"	""	"273.2"	"0.5"	"302.1"	"282.2"	""	"1101"	"70"	"37.000"	"30.000"	"5.41698113721505E-06"	"17"	"0"	"2.466E-05"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"1249.70081"	"2498.39433"	"2498.39403"	"0.12"	"0.00015"	"10/216"	"10"	"216"	"170747.865783691"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"73.0899"	"24237"	"24237"	"24209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"25.8"	""	"20.3"	""	"17.4"	""	"13.7"	""	"13.0"	"11.9"	""	"1097"	"19"	"37.000"	"30.000"	"0.687347934455367"	"17"	"0.0001889"	"0.0006758"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.46973"	"2498.39463"	"2498.39403"	"0.24"	"0.00020"	"21/216"	"21"	"216"	"23631047.4255371"	"HCD"	"MS2"	"0.1018061"	"120.9"	"24.169"	"73.2192"	"24290"	"24290"	"24273"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"254.4"	""	"202.4"	""	"171.4"	""	"169.4"	""	"163.8"	"185.3"	""	"1096"	"76"	"37.000"	"30.000"	"1.29354207178296E-06"	"17"	"0"	"1.698E-05"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9697"	"0.0000"	"1"	"1"	"1"	"625.35413"	"2498.39467"	"2498.39403"	"0.26"	"0.00016"	"18/216"	"18"	"216"	"4308694.6317749"	"HCD"	"MS2"	"1.383769"	"76.7"	"100.000"	"73.2976"	"24322"	"24322"	"24305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.2"	""	"129.7"	""	"104.6"	""	"102.5"	""	"113.0"	"117.5"	""	"1096"	"66"	"37.000"	"30.000"	"1.23248192399801E-05"	"19"	"0"	"2.822E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSMGTIk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.47015"	"2498.39591"	"2498.39403"	"0.75"	"0.00063"	"20/216"	"20"	"216"	"30129268.3876953"	"HCD"	"MS2"	"0"	"141.4"	"24.277"	"73.1272"	"24304"	"24304"	"24287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.8"	""	"251.4"	""	"194.2"	""	"175.4"	""	"200.6"	"189.6"	""	"1095"	"70"	"37.000"	"30.000"	"5.88009203256832E-06"	"17"	"0"	"1.495E-05"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APPSFFAQVPQAPPVLVFK"	"[M].aPPSFFAQVPQAPPVLVFk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.36896"	"2498.45400"	"2498.45756"	"-1.42"	"-0.00089"	"13/166"	"13"	"166"	"567087.199401855"	"HCD"	"MS2"	"10.26785"	"8.5"	"100.000"	"87.1285"	"29993"	"29993"	"29977"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.2"	""	"9.4"	""	"15.1"	""	"13.4"	""	"13.0"	"14.9"	""	"577"	"26"	"34.000"	"27.000"	"0.072634979365843"	"14"	"0"	"0.0001426"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APPSFFAQVPQAPPVLVFK"	"[M].aPPSFFAQVPQAPPVLVFk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.48999"	"2498.45542"	"2498.45756"	"-0.86"	"-0.00071"	"13/166"	"13"	"166"	"357850.948364258"	"HCD"	"MS2"	"10.84669"	"7.4"	"100.000"	"86.9300"	"29913"	"29913"	"29894"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.5"	""	"6.7"	""	"8.8"	""	"12.0"	""	"12.9"	"15.5"	""	"562"	"41"	"34.000"	"27.000"	"0.00206874194396021"	"15"	"0"	"5.66E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APPSFFAQVPQAPPVLVFK"	"[M].aPPSFFAQVPQAPPVLVFk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.49060"	"2498.45725"	"2498.45756"	"-0.12"	"-0.00010"	"12/166"	"12"	"166"	"340515.980957031"	"HCD"	"MS2"	"19.35649"	"7.0"	"100.000"	"86.8183"	"29816"	"29816"	"29793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.6"	""	"10.9"	""	"7.5"	""	"6.3"	""	"14.2"	"14.2"	""	"543"	"34"	"34.000"	"27.000"	"0.0121274595268987"	"15"	"0.0001859"	"0.0003725"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLKHLDNLK"	"[K].vINAFNDGLkHLDNLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex); K16(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.37256"	"2498.46840"	"2498.46980"	"-0.56"	"-0.00035"	"11/158"	"11"	"158"	"12095089.8292847"	"HCD"	"MS2"	"30.93003"	"323.5"	"97.663"	"58.8919"	"18502"	"18502"	"18485"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"464.8"	""	"353.3"	""	"395.7"	""	"682.3"	""	"607.6"	"562.0"	""	"459"	"18"	"33.000"	"26.000"	"0.351384572456026"	"14"	"0"	"2.634E-05"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLKHLDNLK"	"[K].vINAFNDGLkHLDNLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex); K16(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"0.9000"	"0.0000"	"1"	"1"	"1"	"625.37299"	"2498.47011"	"2498.46980"	"0.12"	"0.00008"	"15/158"	"15"	"158"	"10265828.0236206"	"HCD"	"MS2"	"33.25455"	"313.2"	"100.000"	"58.7138"	"18379"	"18379"	"18361"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"434.6"	""	"353.3"	""	"377.8"	""	"644.8"	""	"599.2"	"559.3"	""	"451"	"20"	"33.000"	"26.000"	"0.23181767522752"	"15"	"0"	"5.866E-05"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLKHLDNLK"	"[K].vINAFNDGLkHLDNLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex); K16(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.37323"	"2498.47109"	"2498.46980"	"0.51"	"0.00032"	"13/158"	"13"	"158"	"2879000.3661499"	"HCD"	"MS2"	"12.55927"	"106.0"	"100.000"	"59.0056"	"18494"	"18494"	"18473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.2"	""	"122.7"	""	"133.9"	""	"186.7"	"1.9"	"211.7"	"208.5"	""	"450"	"48"	"33.000"	"26.000"	"0.000344494678878456"	"16"	"0"	"7.368E-06"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGFIGPGIDVPAPDMSTGER"	"[K].kGFIGPGIDVPAPDMSTGER.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.78583"	"2502.34293"	"2502.34266"	"0.11"	"0.00009"	"15/210"	"15"	"210"	"4589118.8895874"	"HCD"	"MS2"	"4.532792"	"107.5"	"100.000"	"52.5955"	"15949"	"15949"	"15926"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.8"	""	"212.8"	""	"218.3"	""	"95.0"	""	"138.4"	"145.3"	""	"1401"	"54"	"38.000"	"31.000"	"0.000312182202002451"	"16"	"0"	"2.439E-07"	"1.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGFIGPGIDVPAPDMSTGER"	"[K].kGFIGPGIDVPAPDMSTGER.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.78632"	"2502.34439"	"2502.34266"	"0.69"	"0.00058"	"20/210"	"20"	"210"	"570693.435058594"	"HCD"	"MS2"	"0"	"28.4"	"100.000"	"52.6871"	"15937"	"15937"	"15906"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.1"	""	"44.7"	""	"48.1"	""	"31.1"	""	"51.4"	"52.5"	""	"1407"	"37"	"38.000"	"31.000"	"0.0141992073684998"	"15"	"0"	"1.565E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGFIGPGIDVPAPDMSTGER"	"[K].kGFIGPGIDVPAPDMSTGER.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.78687"	"2502.34604"	"2502.34266"	"1.35"	"0.00113"	"22/210"	"22"	"210"	"3613826.87963867"	"HCD"	"MS2"	"8.150158"	"91.8"	"100.000"	"52.3718"	"15808"	"15808"	"15778"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"171.2"	""	"185.1"	""	"169.5"	""	"86.8"	""	"127.4"	"130.3"	""	"1398"	"46"	"38.000"	"31.000"	"0.00183855732633487"	"15"	"0"	"2.013E-06"	"1.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDKNNLLTNK"	"[K].nYTDVYDkNNLLTNk.[T]"	"N-Term(TMT6plex); K8(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.35028"	"2502.37929"	"2502.38071"	"-0.57"	"-0.00036"	"11/160"	"11"	"160"	"1747347.54870605"	"HCD"	"MS2"	"34.0981"	"95.7"	"100.000"	"46.6541"	"13479"	"13479"	"13448"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"152.7"	""	"120.1"	""	"126.4"	""	"167.9"	"0.4"	"175.8"	"162.4"	""	"1232"	"7"	"37.000"	"30.000"	"11.3130761950258"	"13"	"0.0009092"	"0.009632"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDKNNLLTNK"	"[K].nYTDVYDkNNLLTNk.[T]"	"N-Term(TMT6plex); K8(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.79810"	"2502.37973"	"2502.38071"	"-0.39"	"-0.00033"	"13/160"	"13"	"160"	"2745700.19006348"	"HCD"	"MS2"	"10.35447"	"244.5"	"100.000"	"46.4885"	"13411"	"13411"	"13384"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"774.6"	""	"389.3"	""	"347.4"	""	"301.1"	"0.4"	"241.8"	"238.9"	""	"1224"	"14"	"37.000"	"30.000"	"2.6046622883785"	"13"	"0"	"0.0001133"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDKNNLLTNK"	"[K].nYTDVYDkNNLLTNk.[T]"	"N-Term(TMT6plex); K8(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.79828"	"2502.38028"	"2502.38071"	"-0.17"	"-0.00014"	"12/160"	"12"	"160"	"2253948.21337891"	"HCD"	"MS2"	"0"	"210.1"	"100.000"	"46.7552"	"13568"	"13568"	"13538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"622.4"	""	"339.4"	""	"303.7"	""	"283.6"	"0.6"	"210.8"	"211.2"	""	"1215"	"20"	"37.000"	"30.000"	"0.634667533176636"	"14"	"0"	"0.0001794"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPLDQPSSFDATPYIK"	"[K].vIRPLDQPSSFDATPYIk.[D]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.80872"	"2505.41159"	"2505.41173"	"-0.05"	"-0.00005"	"17/182"	"17"	"182"	"2874025.7835083"	"HCD"	"MS2"	"0"	"116.8"	"100.000"	"55.8774"	"17220"	"17220"	"17195"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.5"	""	"195.3"	""	"172.8"	""	"167.8"	""	"176.3"	"181.7"	""	"939"	"26"	"36.000"	"29.000"	"0.123491082219488"	"14"	"0"	"1.548E-06"	"1.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPLDQPSSFDATPYIK"	"[K].vIRPLDQPSSFDATPYIk.[D]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.10858"	"2505.41250"	"2505.41173"	"0.31"	"0.00019"	"8/182"	"8"	"182"	"2307560.55352783"	"HCD"	"MS2"	"0"	"68.1"	"100.000"	"56.0018"	"17271"	"17271"	"17243"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"103.9"	""	"102.8"	""	"104.7"	""	"110.2"	"0.6"	"105.9"	"115.9"	""	"931"	"18"	"36.000"	"29.000"	"0.820199849604613"	"14"	"0"	"5.532E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIRPLDQPSSFDATPYIK"	"[K].vIRPLDQPSSFDATPYIk.[D]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.80927"	"2505.41324"	"2505.41173"	"0.60"	"0.00050"	"16/182"	"16"	"182"	"4117860.26159668"	"HCD"	"MS2"	"0.8276604"	"152.7"	"100.000"	"56.1527"	"17386"	"17386"	"17365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.4"	""	"258.1"	""	"246.8"	""	"211.1"	""	"215.4"	"241.0"	""	"936"	"26"	"36.000"	"29.000"	"0.109205837314751"	"14"	"0"	"3.368E-06"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVNVPFMNFLTEDGFEK"	"[R].gSVNVPFmnFLTEDGFEk.[S]"	"N-Term(TMT6plex); M8(Oxidation); N9(Deamidated); K18(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"836.10608"	"2506.30368"	"2506.25760"	"18.39"	"0.01536"	"6/194"	"6"	"194"	"126306.800170898"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"89.5620"	"30906"	"30906"	"30890"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.9"	""	"7.4"	""	"8.3"	""	"6.6"	""	"4.8"	"8.9"	""	"1461"	"18"	"38.000"	"31.000"	"1.16578971705643"	"15"	"0.006001"	"0.2066"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEQGFITDPVVLSPK"	"[K].kYEQGFITDPVVLSPk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K16(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"1"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"836.82678"	"2508.46579"	"2508.46807"	"-0.91"	"-0.00076"	"6/172"	"6"	"172"	"674645.978637695"	"HCD"	"MS2"	"0"	"38.8"	"100.000"	"55.4922"	"17116"	"17116"	"17093"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"39.7"	""	"51.6"	""	"51.3"	""	"57.1"	""	"103.8"	"68.4"	""	"499"	"22"	"33.000"	"26.000"	"0.158150492958603"	"17"	"0.0001889"	"0.0004143"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEQGFITDPVVLSPK"	"[K].kYEQGFITDPVVLSPk.[D]"	"N-Term(TMT6plex); K1(TMT6plex); K16(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"1"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"836.82800"	"2508.46946"	"2508.46807"	"0.55"	"0.00046"	"6/172"	"6"	"172"	"810393.321105957"	"HCD"	"MS2"	"0"	"50.0"	"100.000"	"55.3045"	"16986"	"16986"	"16955"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.2"	""	"57.1"	""	"67.4"	""	"77.2"	"0.8"	"130.7"	"84.2"	""	"488"	"20"	"33.000"	"26.000"	"0.225626354440926"	"16"	"0.0001889"	"0.0003907"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLMGMFEk.[R]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"838.43695"	"2513.29630"	"2513.30317"	"-2.73"	"-0.00229"	"7/188"	"7"	"188"	"75069.6630859375"	"HCD"	"MS2"	"0"	"2.3"	"100.000"	"92.2479"	"31829"	"31829"	"31825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"3.3"	""	""	""	"5.4"	""	"2.7"	"6.7"	""	"1431"	"9"	"38.000"	"31.000"	"8.8635895766248"	"13"	"0.0001889"	"0.001027"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLMGMFEk.[R]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"838.43817"	"2513.29996"	"2513.30317"	"-1.28"	"-0.00107"	"14/188"	"14"	"188"	"170095.099182129"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"92.6979"	"31996"	"31996"	"31992"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"2.3"	""	"8.7"	""	"5.2"	""	"10.9"	"12.4"	""	"1426"	"49"	"38.000"	"31.000"	"0.000916409388539799"	"20"	"0"	"7.242E-06"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLMGMFEk.[R]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"838.43884"	"2513.30198"	"2513.30317"	"-0.47"	"-0.00040"	"8/188"	"8"	"188"	"102697.980834961"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"92.4365"	"31912"	"31912"	"31906"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.2"	""	"2.9"	""	""	""	"3.4"	""	"4.6"	"5.8"	""	"1421"	"22"	"38.000"	"31.000"	"0.49381477764684"	"17"	"0.0001889"	"0.0009338"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLMGMFEk.[R]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"838.43933"	"2513.30344"	"2513.30317"	"0.11"	"0.00009"	"4/188"	"4"	"188"	"60741.2364501953"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"92.7714"	"31995"	"31995"	"31990"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.1"	""	"2.1"	""	""	""	"3.0"	""	"5.9"	"4.3"	""	"1425"	"14"	"38.000"	"31.000"	"2.81050827728636"	"17"	"0.0003571"	"0.001483"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLMGMFEk.[R]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"838.43939"	"2513.30362"	"2513.30317"	"0.18"	"0.00015"	"12/188"	"12"	"188"	"229102.665710449"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"92.5060"	"31909"	"31909"	"31907"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"11.1"	""	"9.4"	""	"8.3"	""	"15.6"	"19.5"	""	"1425"	"36"	"38.000"	"31.000"	"0.0188271623959189"	"18"	"0"	"1.394E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVLGNPLTQGINQGPQIDK"	"[K].yVLGNPLTQGINQGPQIDk.[E]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9205"	"0.0000"	"1"	"1"	"1"	"838.47540"	"2513.41166"	"2513.41279"	"-0.45"	"-0.00038"	"19/192"	"19"	"192"	"2085501.75457764"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"63.4037"	"20290"	"20290"	"20265"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.4"	""	"60.9"	""	"65.5"	""	"95.6"	"0.1"	"106.5"	"136.0"	""	"950"	"88"	"36.000"	"29.000"	"7.52824266419029E-08"	"25"	"0"	"2.031E-07"	"1.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVLGNPLTQGINQGPQIDK"	"[K].yVLGNPLTQGINQGPQIDk.[E]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9825"	"0.0000"	"1"	"1"	"1"	"838.47626"	"2513.41422"	"2513.41279"	"0.57"	"0.00048"	"18/192"	"18"	"192"	"3736462.46173096"	"HCD"	"MS2"	"0"	"85.7"	"100.000"	"63.4898"	"20378"	"20378"	"20355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"79.7"	""	"96.6"	""	"120.5"	""	"146.7"	"1.0"	"183.8"	"185.9"	""	"938"	"57"	"36.000"	"29.000"	"8.73318867094885E-05"	"17"	"0"	"1.243E-06"	"1.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSmGTIk.[W]"	"N-Term(TMT6plex); M16(Oxidation); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9855"	"0.0000"	"1"	"1"	"1"	"838.80115"	"2514.38889"	"2514.38895"	"-0.02"	"-0.00002"	"20/216"	"20"	"216"	"1417575.53985596"	"HCD"	"MS2"	"0"	"33.7"	"100.000"	"59.5884"	"18785"	"18785"	"18757"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"65.9"	""	"56.8"	""	"44.3"	""	"55.6"	""	"50.4"	"46.7"	""	"1145"	"69"	"37.000"	"30.000"	"6.75733563910614E-06"	"18"	"0"	"4.527E-06"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSmGTIk.[W]"	"N-Term(TMT6plex); M16(Oxidation); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"838.80176"	"2514.39072"	"2514.38895"	"0.71"	"0.00059"	"14/216"	"14"	"216"	"337964.865234375"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"59.7700"	"18806"	"18806"	"18777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.0"	""	"24.5"	""	"31.2"	""	"26.4"	""	"26.2"	"32.3"	""	"1138"	"45"	"37.000"	"30.000"	"0.00177056659581333"	"22"	"0"	"3.15E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAQPAPSPEDLALSMGTIK"	"[R].lTAQPAPSPEDLALSmGTIk.[W]"	"N-Term(TMT6plex); M16(Oxidation); K20(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"838.80188"	"2514.39109"	"2514.38895"	"0.85"	"0.00071"	"17/216"	"17"	"216"	"1587058.46618652"	"HCD"	"MS2"	"0"	"38.2"	"100.000"	"59.4571"	"18678"	"18678"	"18649"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.0"	""	"60.8"	""	"48.7"	""	"62.1"	""	"59.3"	"54.8"	""	"1137"	"58"	"37.000"	"30.000"	"8.92751254263626E-05"	"19"	"0"	"1.875E-05"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQLTQALDTNTVGALLAEK"	"[K].aVQLTQALDTNTVGALLAEk.[M]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"838.82263"	"2514.45334"	"2514.45432"	"-0.39"	"-0.00033"	"13/214"	"13"	"214"	"212418.471557617"	"HCD"	"MS2"	"29.95322"	"8.0"	"100.000"	"80.8140"	"27428"	"27428"	"27406"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.4"	""	"12.5"	""	"7.4"	""	"13.6"	""	"14.4"	"17.9"	""	"632"	"48"	"34.000"	"28.000"	"0.000477185328715871"	"19"	"0"	"5.849E-06"	"1.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQLTQALDTNTVGALLAEK"	"[K].aVQLTQALDTNTVGALLAEk.[M]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"838.82306"	"2514.45462"	"2514.45432"	"0.12"	"0.00010"	"11/214"	"11"	"214"	"150316.097595215"	"HCD"	"MS2"	"5.43076"	"7.3"	"100.000"	"80.9184"	"27420"	"27420"	"27392"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.8"	""	"3.8"	""	"14.8"	""	"9.6"	""	"11.4"	"18.5"	""	"621"	"33"	"34.000"	"27.000"	"0.0149300617693641"	"16"	"0"	"0.0001037"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNPQLGTDADKEQWK"	"[K].sLNPQLGTDADkEQWk.[D]"	"N-Term(TMT6plex); K12(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"1"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"839.80066"	"2517.38742"	"2517.39161"	"-1.66"	"-0.00140"	"19/170"	"19"	"170"	"3673058.73388672"	"HCD"	"MS2"	"37.13182"	"265.3"	"100.000"	"43.6719"	"12314"	"12314"	"12287"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"658.7"	""	"422.3"	""	"386.8"	""	"337.3"	""	"357.2"	"337.4"	""	"1258"	"44"	"37.000"	"30.000"	"0.00278388086216093"	"17"	"0"	"2.084E-07"	"1.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNPQLGTDADKEQWK"	"[K].sLNPQLGTDADkEQWk.[D]"	"N-Term(TMT6plex); K12(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"1"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"839.80109"	"2517.38871"	"2517.39161"	"-1.15"	"-0.00097"	"20/170"	"20"	"170"	"7514028.43371582"	"HCD"	"MS2"	"0"	"361.4"	"67.896"	"43.4469"	"12173"	"12173"	"12159"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"851.0"	""	"518.1"	""	"594.2"	""	"446.8"	"5.6"	"497.3"	"491.3"	""	"1242"	"37"	"37.000"	"30.000"	"0.0116705574323483"	"20"	"0"	"1.052E-06"	"1.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNPQLGTDADKEQWK"	"[K].sLNPQLGTDADkEQWk.[D]"	"N-Term(TMT6plex); K12(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.80133"	"2517.38944"	"2517.39161"	"-0.86"	"-0.00072"	"9/170"	"9"	"170"	"568646.211669922"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"43.9857"	"12442"	"12442"	"12416"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.6"	""	"83.9"	""	"90.2"	""	"66.8"	""	"80.2"	"75.1"	""	"1237"	"3"	"37.000"	"30.000"	"31.647521528168"	"13"	"0.0002277"	"0.001289"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNPQLGTDADKEQWK"	"[K].sLNPQLGTDADkEQWk.[D]"	"N-Term(TMT6plex); K12(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.10327"	"2517.39126"	"2517.39161"	"-0.14"	"-0.00009"	"11/170"	"11"	"170"	"4782839.96246338"	"HCD"	"MS2"	"13.5328"	"188.1"	"98.041"	"43.5225"	"12204"	"12204"	"12186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"352.6"	""	"268.2"	""	"301.7"	""	"248.2"	"4.2"	"316.2"	"285.8"	""	"1239"	"10"	"37.000"	"30.000"	"6.88717805050946"	"13"	"0.0001308"	"0.0002376"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGFIGPGIDVPAPDMSTGER"	"[K].kGFIGPGIDVPAPDmSTGER.[E]"	"N-Term(TMT6plex); K1(TMT6plex); M15(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"840.11560"	"2518.33225"	"2518.33758"	"-2.12"	"-0.00178"	"21/210"	"21"	"210"	"1334669.72827148"	"HCD"	"MS2"	"55.09636"	"37.6"	"100.000"	"46.2821"	"13326"	"13326"	"13304"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.6"	""	"55.4"	""	"57.3"	""	"68.4"	""	"58.1"	"58.4"	""	"1420"	"49"	"38.000"	"31.000"	"0.000980072827868048"	"16"	"0"	"2.755E-06"	"1.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.9091"	"0.0000"	"1"	"1"	"1"	"630.34149"	"2518.34414"	"2518.35349"	"-3.71"	"-0.00234"	"8/162"	"8"	"162"	"926384.695739746"	"HCD"	"MS2"	"42.28681"	"29.8"	"100.000"	"78.1009"	"26271"	"26271"	"26241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.2"	""	"39.8"	""	"46.7"	""	"49.5"	"0.3"	"50.9"	"49.2"	""	"1413"	"11"	"38.000"	"31.000"	"5.66385551783395"	"14"	"0.0001308"	"0.0002321"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	""	"0.0000"	"2"	"2"	"2"	"630.34247"	"2518.34804"	"2518.35349"	"-2.16"	"-0.00136"	"11/162"	"11"	"162"	"773366.556762695"	"HCD"	"MS2"	"56.187"	"27.0"	"100.000"	"77.6827"	"26100"	"26100"	"26073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.3"	""	"30.0"	""	"33.0"	""	"46.0"	"1.1"	"56.6"	"47.4"	""	"1424"	"6"	"38.000"	"31.000"	"16.4240399836869"	"17"	"0.0001889"	"0.0006473"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"5"	"5"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.47592"	"2518.35050"	"2518.35349"	"-1.19"	"-0.00060"	"9/162"	"9"	"162"	"15959867.4230347"	"HCD"	"MS2"	"16.1937"	"265.0"	"100.000"	"57.8804"	"18092"	"18092"	"18069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"573.1"	""	"457.2"	""	"386.3"	""	"381.8"	"0.8"	"376.6"	"321.5"	""	"1421"	"24"	"38.000"	"31.000"	"0.297552828016281"	"14"	"0"	"2.515E-05"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.34314"	"2518.35073"	"2518.35349"	"-1.10"	"-0.00069"	"11/162"	"11"	"162"	"1051394.05505371"	"HCD"	"MS2"	"42.86531"	"30.7"	"100.000"	"78.4233"	"26453"	"26453"	"26431"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.5"	""	"48.9"	""	"44.2"	""	"47.0"	""	"48.5"	"60.6"	""	"1420"	"8"	"38.000"	"31.000"	"11.4619457534681"	"13"	"0.0004166"	"0.002408"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.34314"	"2518.35073"	"2518.35349"	"-1.10"	"-0.00069"	"11/162"	"11"	"162"	"1163240.76287842"	"HCD"	"MS2"	"34.69744"	"31.2"	"100.000"	"75.8266"	"25353"	"25353"	"25329"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"46.0"	""	"37.0"	""	"44.8"	""	"53.3"	"0.8"	"58.2"	"55.9"	""	"1420"	"14"	"38.000"	"31.000"	"2.68076255557045"	"14"	"0"	"6.314E-05"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"5"	"5"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.47601"	"2518.35096"	"2518.35349"	"-1.00"	"-0.00051"	"9/162"	"9"	"162"	"8937800.95306396"	"HCD"	"MS2"	"5.408365"	"143.2"	"100.000"	"58.1958"	"18221"	"18221"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"295.5"	""	"238.4"	""	"215.5"	""	"205.7"	"0.1"	"213.4"	"181.8"	""	"1422"	"26"	"38.000"	"31.000"	"0.185297517404921"	"14"	"0"	"3.249E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.9259"	"0.0000"	"1"	"1"	"1"	"630.34332"	"2518.35146"	"2518.35349"	"-0.80"	"-0.00051"	"13/162"	"13"	"162"	"71706757.6311035"	"HCD"	"MS2"	"15.18342"	"235.7"	"20.265"	"57.8687"	"18087"	"18087"	"18069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"518.9"	""	"409.3"	""	"345.0"	""	"334.4"	""	"334.8"	"278.3"	""	"1423"	"27"	"38.000"	"31.000"	"0.148653419710265"	"16"	"0"	"8.711E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"5"	"5"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.47623"	"2518.35203"	"2518.35349"	"-0.58"	"-0.00029"	"12/162"	"12"	"162"	"17012759.6345215"	"HCD"	"MS2"	"3.565982"	"270.8"	"100.000"	"57.7852"	"17999"	"17999"	"17979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"605.3"	""	"450.8"	""	"388.8"	""	"393.0"	"3.1"	"392.2"	"318.8"	""	"1418"	"27"	"38.000"	"31.000"	"0.146098660850843"	"14"	"0"	"1.437E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.9375"	"0.0000"	"1"	"1"	"1"	"630.34363"	"2518.35268"	"2518.35349"	"-0.32"	"-0.00020"	"8/162"	"8"	"162"	"1137229.92773438"	"HCD"	"MS2"	"44.46576"	"30.2"	"100.000"	"75.8581"	"25418"	"25418"	"25391"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.4"	""	"42.5"	""	"39.3"	""	"47.7"	"1.6"	"51.0"	"48.9"	""	"1408"	"16"	"38.000"	"31.000"	"1.84320083778617"	"14"	"0"	"5.164E-05"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"840.12250"	"2518.35294"	"2518.35349"	"-0.22"	"-0.00018"	"12/162"	"12"	"162"	"5765242.175354"	"HCD"	"MS2"	"0"	"158.1"	"100.000"	"57.8781"	"18091"	"18091"	"18069"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"322.1"	""	"279.5"	""	"213.1"	""	"227.8"	""	"252.8"	"203.4"	""	"1408"	"27"	"38.000"	"31.000"	"0.156881834508629"	"15"	"0"	"6.868E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"840.12256"	"2518.35312"	"2518.35349"	"-0.15"	"-0.00012"	"6/162"	"6"	"162"	"4025922.67468262"	"HCD"	"MS2"	"0"	"142.6"	"100.000"	"57.9876"	"18082"	"18082"	"18059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"234.5"	""	"202.9"	""	"181.4"	""	"295.7"	"0.0"	"235.3"	"197.6"	""	"1406"	"25"	"38.000"	"31.000"	"0.218753658498553"	"19"	"0"	"3.446E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.7500"	"0.0000"	"1"	"1"	"1"	"630.34387"	"2518.35366"	"2518.35349"	"0.07"	"0.00004"	"9/162"	"9"	"162"	"7445701.58636475"	"HCD"	"MS2"	"13.85555"	"163.7"	"100.000"	"58.2938"	"18207"	"18207"	"18187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"290.9"	""	"257.9"	""	"255.9"	""	"228.3"	""	"276.7"	"238.3"	""	"1405"	"16"	"38.000"	"31.000"	"1.94377650590158"	"17"	"7.476E-05"	"0.0001955"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.34399"	"2518.35415"	"2518.35349"	"0.26"	"0.00016"	"10/162"	"10"	"162"	"1418460.52197266"	"HCD"	"MS2"	"60.34023"	"35.0"	"100.000"	"76.1833"	"25546"	"25546"	"25519"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.3"	""	"49.2"	""	"45.5"	""	"52.6"	""	"65.4"	"65.9"	""	"1391"	"4"	"38.000"	"31.000"	"25.8998431700052"	"13"	"0.0001889"	"0.0004166"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.8182"	"0.0000"	"1"	"1"	"1"	"630.34406"	"2518.35439"	"2518.35349"	"0.36"	"0.00023"	"10/162"	"10"	"162"	"46021335.6306152"	"HCD"	"MS2"	"0.2545804"	"146.0"	"20.387"	"58.1818"	"18215"	"18215"	"18197"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"319.2"	""	"245.1"	""	"218.6"	""	"196.1"	"3.1"	"221.7"	"173.0"	""	"1382"	"22"	"38.000"	"31.000"	"0.48919053700944"	"18"	"0"	"0.0001759"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.6154"	"0.0000"	"1"	"1"	"1"	"630.34448"	"2518.35610"	"2518.35349"	"1.04"	"0.00065"	"11/162"	"11"	"162"	"788500.878479004"	"HCD"	"MS2"	"44.21507"	"22.2"	"100.000"	"78.9076"	"26651"	"26651"	"26623"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.0"	""	"28.0"	""	"34.1"	""	"28.8"	""	"41.8"	"36.5"	""	"1372"	"13"	"38.000"	"31.000"	"3.23090445908309"	"18"	"0.0001889"	"0.0006915"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"840.12366"	"2518.35642"	"2518.35349"	"1.16"	"0.00098"	"6/162"	"6"	"162"	"4750977.21392822"	"HCD"	"MS2"	"2.96403"	"138.9"	"100.000"	"57.6884"	"17960"	"17960"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"301.8"	""	"221.4"	""	"201.1"	""	"206.1"	""	"212.6"	"173.0"	""	"1366"	"24"	"38.000"	"31.000"	"0.27760079381984"	"15"	"0"	"3.137E-05"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.8696"	"0.0000"	"1"	"1"	"1"	"630.34460"	"2518.35659"	"2518.35349"	"1.23"	"0.00078"	"11/162"	"11"	"162"	"40737214.6137695"	"HCD"	"MS2"	"31.67801"	"276.4"	"41.094"	"57.6586"	"17948"	"17948"	"17931"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"586.8"	""	"474.9"	""	"385.3"	""	"391.4"	""	"414.3"	"353.8"	""	"1365"	"23"	"38.000"	"31.000"	"0.337367043868515"	"17"	"0"	"7.756E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.9048"	"0.0000"	"1"	"1"	"1"	"630.34467"	"2518.35683"	"2518.35349"	"1.33"	"0.00084"	"12/162"	"12"	"162"	"553640.125732422"	"HCD"	"MS2"	"22.41586"	"16.1"	"100.000"	"80.6315"	"27354"	"27354"	"27327"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.0"	""	"25.3"	""	"25.3"	""	"25.6"	""	"21.3"	"22.9"	""	"1384"	"21"	"38.000"	"31.000"	"0.583587652372879"	"16"	"0"	"9.024E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.8750"	"0.0000"	"1"	"1"	"1"	"630.34467"	"2518.35683"	"2518.35349"	"1.33"	"0.00084"	"11/162"	"11"	"162"	"57766844.0412598"	"HCD"	"MS2"	"0"	"139.2"	"15.392"	"57.9762"	"18077"	"18077"	"18059"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"310.1"	""	"241.6"	""	"192.4"	""	"197.7"	""	"191.8"	"179.8"	""	"1384"	"24"	"38.000"	"31.000"	"0.263697549788491"	"17"	"7.476E-05"	"0.0001944"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.34521"	"2518.35903"	"2518.35349"	"2.20"	"0.00139"	"9/162"	"9"	"162"	"1752717.61657715"	"HCD"	"MS2"	"39.17607"	"45.8"	"100.000"	"72.7025"	"24079"	"24079"	"24049"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"62.8"	""	"57.7"	""	"56.9"	""	"81.1"	"2.0"	"85.8"	"88.0"	""	"1359"	"13"	"38.000"	"31.000"	"3.19293046797244"	"14"	"0.0003146"	"0.00142"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPYFYAPELLYYAEK"	"[R].rHPYFYAPELLYYAEk.[Y]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"0.5833"	"0.0000"	"1"	"1"	"1"	"630.34540"	"2518.35976"	"2518.35349"	"2.49"	"0.00157"	"5/162"	"5"	"162"	"834565.551696777"	"HCD"	"MS2"	"27.93799"	"25.1"	"100.000"	"79.0790"	"26670"	"26670"	"26641"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.9"	""	"33.5"	""	"39.2"	""	"41.3"	""	"43.8"	"42.8"	""	"1354"	"12"	"38.000"	"31.000"	"4.55605196304483"	"18"	"0.0001859"	"0.0003595"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKYDEIFYNLAPADGK"	"[K].skYDEIFYNLAPADGk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"840.12994"	"2518.37528"	"2518.37965"	"-1.74"	"-0.00146"	"16/174"	"16"	"174"	"1359419.4909668"	"HCD"	"MS2"	"0"	"58.4"	"100.000"	"60.2002"	"19035"	"19035"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.3"	""	"80.7"	""	"93.3"	""	"85.0"	""	"110.5"	"83.4"	""	"1276"	"22"	"38.000"	"31.000"	"0.377416322603953"	"15"	"0"	"3.891E-05"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKYDEIFYNLAPADGK"	"[K].skYDEIFYNLAPADGk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.34967"	"2518.37685"	"2518.37965"	"-1.11"	"-0.00070"	"11/174"	"11"	"174"	"2314802.02288818"	"HCD"	"MS2"	"4.003753"	"52.9"	"100.000"	"60.2139"	"19041"	"19041"	"19011"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.1"	""	"73.2"	""	"81.5"	""	"83.1"	""	"98.1"	"83.8"	""	"1251"	"11"	"37.000"	"30.000"	"5.02605589427104"	"13"	"0.0006037"	"0.005108"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKYDEIFYNLAPADGK"	"[K].skYDEIFYNLAPADGk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"840.13165"	"2518.38041"	"2518.37965"	"0.30"	"0.00025"	"15/174"	"15"	"174"	"2068620.14831543"	"HCD"	"MS2"	"52.91985"	"77.7"	"100.000"	"59.8987"	"18912"	"18912"	"18884"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.0"	""	"126.7"	""	"120.0"	""	"128.1"	""	"132.2"	"98.0"	""	"1227"	"30"	"37.000"	"30.000"	"0.0682047414687257"	"15"	"0"	"1.85E-05"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKYDEIFYNLAPADGK"	"[K].skYDEIFYNLAPADGk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"840.13171"	"2518.38059"	"2518.37965"	"0.37"	"0.00031"	"17/174"	"17"	"174"	"3195900.47631836"	"HCD"	"MS2"	"0"	"106.9"	"100.000"	"59.7999"	"18818"	"18818"	"18793"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"198.9"	""	"179.4"	""	"158.8"	""	"166.8"	""	"177.8"	"132.0"	""	"1223"	"25"	"37.000"	"30.000"	"0.183821565905716"	"14"	"0"	"6.614E-06"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNPQLGTDADKEQWK"	"[K].sLNPqLGTDADkEQWk.[D]"	"N-Term(TMT6plex); Q5(Deamidated); K12(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"1"	"3"	"3"	"0.2308"	"0.0000"	"1"	"1"	"1"	"840.13544"	"2518.39176"	"2518.37563"	"6.40"	"0.00538"	"5/170"	"5"	"170"	"304471.527099609"	"HCD"	"MS2"	"37.96344"	"29.4"	"100.000"	"43.8205"	"12325"	"12325"	"12303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.8"	""	"37.4"	""	"44.9"	""	"44.7"	""	"42.2"	"50.3"	""	"1138"	"13"	"37.000"	"30.000"	"2.89142722816959"	"13"	"0.001966"	"0.02903"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSPNVVNLTLVDLPGMTK"	"[K].vFSPNVVNLTLVDLPGmTk.[V]"	"N-Term(TMT6plex); M17(Oxidation); K19(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"840.14984"	"2518.43497"	"2518.43550"	"-0.21"	"-0.00018"	"6/202"	"6"	"202"	"129713.547729492"	"HCD"	"MS2"	"15.10323"	"6.6"	"100.000"	"83.2946"	"28440"	"28440"	"28413"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.1"	""	"6.0"	""	"8.3"	""	"13.6"	""	"11.5"	"12.3"	""	"822"	"18"	"36.000"	"29.000"	"0.696372835983852"	"16"	"0.0003839"	"0.002028"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSPNVVNLTLVDLPGMTK"	"[K].vFSPNVVNLTLVDLPGmTk.[V]"	"N-Term(TMT6plex); M17(Oxidation); K19(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"840.15179"	"2518.44083"	"2518.43550"	"2.12"	"0.00178"	"8/202"	"8"	"202"	"171412.520019531"	"HCD"	"MS2"	"11.03452"	"7.4"	"100.000"	"83.1595"	"28334"	"28334"	"28303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.8"	""	"10.4"	""	"6.8"	""	"18.3"	""	"16.8"	"10.1"	""	"784"	"23"	"35.000"	"28.000"	"0.18892353666905"	"14"	"0.0001889"	"0.0004871"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIYGEKFEDENFILK"	"[K].sIYGEkFEDENFILk.[H]"	"N-Term(TMT6plex); K6(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"840.46967"	"2519.39444"	"2519.40005"	"-2.23"	"-0.00187"	"14/148"	"14"	"148"	"5788659.85430908"	"HCD"	"MS2"	"5.56908"	"413.1"	"100.000"	"61.0556"	"19384"	"19384"	"19363"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"973.2"	""	"706.4"	""	"667.2"	""	"566.0"	""	"450.8"	"522.0"	""	"1119"	"10"	"37.000"	"30.000"	"5.11446358602605"	"13"	"0"	"6.087E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIYGEKFEDENFILK"	"[K].sIYGEkFEDENFILk.[H]"	"N-Term(TMT6plex); K6(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"840.47131"	"2519.39939"	"2519.40005"	"-0.26"	"-0.00022"	"16/148"	"16"	"148"	"4285160.04748535"	"HCD"	"MS2"	"7.94871"	"322.9"	"100.000"	"60.8924"	"19264"	"19264"	"19241"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"763.8"	""	"577.5"	""	"504.1"	""	"438.8"	"0.7"	"350.0"	"401.3"	""	"1106"	"13"	"37.000"	"30.000"	"2.67131517527994"	"13"	"0"	"9.364E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTQVSPTTLTAQWTAPSVK"	"[K].fTQVSPTTLTAQWTAPSVk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"841.14148"	"2521.40989"	"2521.40665"	"1.28"	"0.00108"	"14/206"	"14"	"206"	"421575.026489258"	"HCD"	"MS2"	"8.691186"	"30.1"	"100.000"	"69.1191"	"22616"	"22616"	"22586"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.8"	""	"35.6"	""	"29.9"	""	"58.3"	"1.1"	"62.3"	"60.0"	""	"1003"	"22"	"37.000"	"30.000"	"0.287919405796975"	"17"	"0.0001308"	"0.0002267"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEELPSLTHLNLSGNNLK"	"[R].lAEELPSLTHLNLSGNNLk.[D]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"0"	"4"	"4"	"0.9259"	"0.0000"	"1"	"1"	"1"	"631.11481"	"2521.43740"	"2521.43901"	"-0.64"	"-0.00040"	"13/180"	"13"	"180"	"2974323.31854248"	"HCD"	"MS2"	"52.12061"	"89.3"	"100.000"	"66.5293"	"21566"	"21566"	"21545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"120.9"	""	"112.9"	""	"117.7"	""	"178.8"	""	"152.5"	"162.6"	""	"765"	"27"	"35.000"	"28.000"	"0.0717185399335788"	"16"	"0"	"3.523E-05"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEELPSLTHLNLSGNNLK"	"[R].lAEELPSLTHLNLSGNNLk.[D]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"0"	"4"	"4"	"0.9600"	"0.0000"	"1"	"1"	"1"	"631.11487"	"2521.43764"	"2521.43901"	"-0.54"	"-0.00034"	"9/180"	"9"	"180"	"3722995.3951416"	"HCD"	"MS2"	"50.71894"	"111.3"	"100.000"	"66.3443"	"21543"	"21543"	"21523"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"138.8"	""	"136.4"	""	"161.0"	""	"221.1"	""	"193.9"	"203.2"	""	"764"	"25"	"35.000"	"28.000"	"0.117236639956542"	"15"	"0"	"0.000175"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEELPSLTHLNLSGNNLK"	"[R].lAEELPSLTHLNLSGNNLk.[D]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"841.15082"	"2521.43790"	"2521.43901"	"-0.44"	"-0.00037"	"18/180"	"18"	"180"	"2648862.89520264"	"HCD"	"MS2"	"1.968493"	"98.7"	"100.000"	"66.4880"	"21549"	"21549"	"21529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"139.6"	""	"117.8"	""	"148.5"	""	"181.4"	"1.4"	"174.1"	"171.4"	""	"757"	"56"	"35.000"	"28.000"	"9.75137557925475E-05"	"22"	"0"	"4.841E-06"	"1.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEELPSLTHLNLSGNNLK"	"[R].lAEELPSLTHLNLSGNNLk.[D]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"Q9EST6"	"Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Rattus norvegicus OX=10116 GN=Anp32b PE=1 SV=1"	"0"	"3"	"3"	"0.9123"	"0.0000"	"1"	"1"	"1"	"841.15106"	"2521.43863"	"2521.43901"	"-0.15"	"-0.00013"	"17/180"	"17"	"180"	"2749721.31634521"	"HCD"	"MS2"	"1.748934"	"94.0"	"100.000"	"66.2724"	"21514"	"21514"	"21491"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.6"	""	"126.7"	""	"116.5"	""	"181.8"	"0.5"	"172.6"	"160.3"	""	"754"	"57"	"35.000"	"28.000"	"7.55685954316666E-05"	"21"	"0"	"7.689E-06"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.52087"	"2522.54807"	"2522.55247"	"-1.75"	"-0.00147"	"16/200"	"16"	"200"	"816991.71673584"	"HCD"	"MS2"	"5.671709"	"27.3"	"100.000"	"75.0970"	"25107"	"25107"	"25087"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.7"	""	"40.0"	""	"43.1"	""	"46.0"	""	"46.7"	"41.3"	""	"129"	"30"	"28.000"	"21.000"	"0.00660023980021087"	"14"	"0"	"9.277E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.52148"	"2522.54990"	"2522.55247"	"-1.02"	"-0.00086"	"9/200"	"9"	"200"	"1240642.171875"	"HCD"	"MS2"	"0"	"39.2"	"100.000"	"74.1416"	"24718"	"24718"	"24687"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"66.1"	""	"51.1"	""	"57.4"	""	"69.6"	""	"70.5"	"57.5"	""	"121"	"37"	"27.000"	"20.000"	"0.00108581384423368"	"15"	"0"	"4.406E-05"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.39331"	"2522.55141"	"2522.55247"	"-0.42"	"-0.00026"	"18/200"	"18"	"200"	"6486141.54193115"	"HCD"	"MS2"	"10.29759"	"109.0"	"100.000"	"74.2825"	"24723"	"24723"	"24705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"189.3"	""	"156.6"	""	"177.5"	""	"175.0"	"1.3"	"173.6"	"155.9"	""	"118"	"28"	"27.000"	"20.000"	"0.0085477539359141"	"14"	"0"	"5.341E-06"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.39337"	"2522.55166"	"2522.55247"	"-0.32"	"-0.00020"	"17/200"	"17"	"200"	"1789619.08514404"	"HCD"	"MS2"	"11.89338"	"41.0"	"100.000"	"74.9515"	"24996"	"24996"	"24977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"64.7"	""	"53.3"	""	"59.1"	""	"64.5"	""	"70.7"	"78.5"	""	"118"	"30"	"27.000"	"20.000"	"0.00530703573102721"	"14"	"0"	"2.769E-05"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.52222"	"2522.55210"	"2522.55247"	"-0.15"	"-0.00012"	"15/200"	"15"	"200"	"543235.565490723"	"HCD"	"MS2"	"10.87373"	"23.4"	"100.000"	"75.1732"	"25087"	"25087"	"25057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.7"	""	"33.5"	""	"31.2"	""	"38.6"	""	"43.2"	"41.5"	""	"117"	"36"	"27.000"	"20.000"	"0.00148305024884128"	"15"	"0"	"9.787E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.39368"	"2522.55288"	"2522.55247"	"0.16"	"0.00010"	"18/200"	"18"	"200"	"21342845.1190186"	"HCD"	"MS2"	"4.70934"	"180.9"	"57.404"	"74.4600"	"24848"	"24848"	"24831"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"327.0"	""	"255.5"	""	"301.9"	""	"287.7"	"2.5"	"267.8"	"265.4"	""	"115"	"27"	"27.000"	"20.000"	"0.0125506969930973"	"14"	"0"	"4.207E-06"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.39386"	"2522.55361"	"2522.55247"	"0.45"	"0.00028"	"13/200"	"13"	"200"	"2465512.6395874"	"HCD"	"MS2"	"10.11732"	"47.2"	"100.000"	"74.8981"	"25026"	"25026"	"25007"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.4"	""	"67.0"	""	"74.6"	""	"68.0"	""	"81.3"	"85.7"	""	"115"	"26"	"27.000"	"20.000"	"0.0151589054684959"	"14"	"0"	"6.576E-06"	"1.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.52344"	"2522.55576"	"2522.55247"	"1.30"	"0.00110"	"12/200"	"12"	"200"	"744438.478027344"	"HCD"	"MS2"	"7.919779"	"28.5"	"100.000"	"74.1073"	"24652"	"24652"	"24625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.3"	""	"44.1"	""	"43.4"	""	"47.6"	""	"47.7"	"42.9"	""	"109"	"38"	"27.000"	"20.000"	"0.000960276945294338"	"15"	"0"	"6.472E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEGGLGPLNIPLLADVTK"	"[R].kEGGLGPLNIPLLADVTk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.39453"	"2522.55630"	"2522.55247"	"1.52"	"0.00096"	"15/200"	"15"	"200"	"19899912.2947998"	"HCD"	"MS2"	"1.198891"	"196.4"	"65.072"	"74.5919"	"24850"	"24850"	"24833"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"373.1"	""	"275.1"	""	"321.0"	""	"315.9"	""	"296.2"	"273.4"	""	"109"	"25"	"27.000"	"20.000"	"0.0174741678185548"	"14"	"0"	"7.124E-06"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAESLADPTEYENLFPGLK"	"[K].aAESLADPTEYENLFPGLk.[E]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"841.78320"	"2523.33506"	"2523.33829"	"-1.28"	"-0.00108"	"10/174"	"10"	"174"	"370159.13873291"	"HCD"	"MS2"	"27.7288"	"12.5"	"100.000"	"79.9139"	"27061"	"27061"	"27039"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.6"	""	"17.0"	""	"16.8"	""	"23.4"	""	"20.6"	"22.2"	""	"1475"	"23"	"38.000"	"31.000"	"0.333243758976505"	"17"	"0"	"4.222E-05"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAESLADPTEYENLFPGLK"	"[K].aAESLADPTEYENLFPGLk.[E]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"841.78503"	"2523.34055"	"2523.33829"	"0.89"	"0.00075"	"12/174"	"12"	"174"	"542290.027648926"	"HCD"	"MS2"	"35.02241"	"16.2"	"100.000"	"79.8914"	"27001"	"27001"	"26977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.8"	""	"16.7"	""	"25.0"	""	"27.6"	""	"30.9"	"27.7"	""	"1454"	"21"	"38.000"	"31.000"	"0.559157830088365"	"20"	"0"	"4.816E-05"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPSPVDPIVPVVPIGPPPAGFR"	"[K].vSPSPVDPIVPVVPIGPPPAGFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.82153"	"2523.45005"	"2523.45365"	"-1.43"	"-0.00120"	"13/186"	"13"	"186"	"1231378.35083008"	"HCD"	"MS2"	"56.0807"	"15.8"	"100.000"	"79.4893"	"26888"	"26888"	"26863"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.2"	""	"19.1"	""	"26.7"	""	"20.2"	""	"28.3"	"30.2"	""	"693"	"41"	"35.000"	"28.000"	"0.00292215493565321"	"15"	"0"	"2.814E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPSPVDPIVPVVPIGPPPAGFR"	"[K].vSPSPVDPIVPVVPIGPPPAGFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.82184"	"2523.45096"	"2523.45365"	"-1.06"	"-0.00089"	"16/186"	"16"	"186"	"1099806.34436035"	"HCD"	"MS2"	"53.47015"	"17.1"	"100.000"	"79.5039"	"26843"	"26843"	"26817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.8"	""	"19.2"	""	"24.0"	""	"25.8"	"1.0"	"30.6"	"31.7"	""	"686"	"37"	"35.000"	"28.000"	"0.0070679606025161"	"15"	"0"	"2.484E-05"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPSPVDPIVPVVPIGPPPAGFR"	"[K].vSPSPVDPIVPVVPIGPPPAGFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"841.82233"	"2523.45243"	"2523.45365"	"-0.48"	"-0.00041"	"13/186"	"13"	"186"	"783066.85723877"	"HCD"	"MS2"	"24.91815"	"17.5"	"100.000"	"79.8084"	"26967"	"26967"	"26945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.5"	""	"23.0"	""	"28.4"	""	"26.8"	""	"32.9"	"28.6"	""	"676"	"22"	"35.000"	"28.000"	"0.219743835335964"	"14"	"0.0001889"	"0.0005932"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTIAPGLFATPLLTTLPDK"	"[R].vVTIAPGLFATPLLTTLPDk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"842.51575"	"2525.53269"	"2525.53587"	"-1.26"	"-0.00106"	"5/184"	"5"	"184"	"121446.718139648"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"96.6751"	"33224"	"33224"	"33214"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.2"	""	"3.9"	""	"2.0"	""	"3.2"	""	"5.6"	"4.9"	""	"200"	"8"	"30.000"	"23.000"	"1.4288939585111"	"13"	"0.001966"	"0.02819"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTIAPGLFATPLLTTLPDK"	"[R].vVTIAPGLFATPLLTTLPDk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"4"	"4"	"0.9429"	"0.0000"	"1"	"1"	"1"	"632.13873"	"2525.53310"	"2525.53587"	"-1.10"	"-0.00069"	"11/184"	"11"	"184"	"373355.301147461"	"HCD"	"MS2"	"1.287915"	"8.2"	"100.000"	"96.4842"	"33165"	"33165"	"33161"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.8"	""	"13.4"	""	"12.8"	""	"12.1"	""	"13.1"	"14.0"	""	"200"	"35"	"30.000"	"23.000"	"0.00303389118419427"	"17"	"0"	"8.12E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTIAPGLFATPLLTTLPDK"	"[R].vVTIAPGLFATPLLTTLPDk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.13885"	"2525.53359"	"2525.53587"	"-0.90"	"-0.00057"	"10/184"	"10"	"184"	"243370.987854004"	"HCD"	"MS2"	"4.912143"	"6.4"	"100.000"	"96.2273"	"33094"	"33094"	"33088"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.5"	""	"8.7"	""	"7.3"	""	"11.7"	""	"7.5"	"13.1"	""	"200"	"38"	"30.000"	"23.000"	"0.00164058977319954"	"15"	"0"	"4.627E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTIAPGLFATPLLTTLPDK"	"[R].vVTIAPGLFATPLLTTLPDk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"842.51605"	"2525.53360"	"2525.53587"	"-0.90"	"-0.00076"	"10/184"	"10"	"184"	"124582.300598145"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"96.1521"	"33070"	"33070"	"33065"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.1"	""	"5.0"	""	"2.5"	""	"5.6"	""	"3.6"	"5.1"	""	"200"	"20"	"30.000"	"23.000"	"0.105196187382322"	"14"	"0.0004557"	"0.002539"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTIAPGLFATPLLTTLPDK"	"[R].vVTIAPGLFATPLLTTLPDk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"632.13898"	"2525.53408"	"2525.53587"	"-0.71"	"-0.00045"	"11/184"	"11"	"184"	"337404.541503906"	"HCD"	"MS2"	"1.994538"	"6.2"	"100.000"	"96.3429"	"33116"	"33116"	"33112"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.9"	""	"9.3"	""	"10.3"	""	"10.1"	""	"12.1"	"9.3"	""	"196"	"34"	"29.000"	"22.000"	"0.00371728685274208"	"17"	"0"	"0.0001032"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTIAPGLFATPLLTTLPDK"	"[R].vVTIAPGLFATPLLTTLPDk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"842.51630"	"2525.53434"	"2525.53587"	"-0.61"	"-0.00051"	"18/184"	"18"	"184"	"1240266.58062744"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"96.4030"	"33143"	"33143"	"33138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.0"	""	"27.2"	""	"39.2"	""	"30.5"	""	"42.9"	"45.2"	""	"196"	"72"	"29.000"	"22.000"	"5.69149129170886E-07"	"17"	"0"	"5.941E-06"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTIAPGLFATPLLTTLPDK"	"[R].vVTIAPGLFATPLLTTLPDk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.13910"	"2525.53457"	"2525.53587"	"-0.52"	"-0.00033"	"12/184"	"12"	"184"	"370854.174499512"	"HCD"	"MS2"	"2.517796"	"7.3"	"100.000"	"96.0781"	"33041"	"33041"	"33038"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	""	"8.6"	""	"10.5"	""	"11.7"	""	"14.4"	"16.4"	""	"196"	"44"	"29.000"	"22.000"	"0.000408531995800929"	"15"	"0"	"4.266E-05"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTIAPGLFATPLLTTLPDK"	"[R].vVTIAPGLFATPLLTTLPDk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"842.51654"	"2525.53507"	"2525.53587"	"-0.32"	"-0.00027"	"5/184"	"5"	"184"	"83038.4835205078"	"HCD"	"MS2"	"0"	"1.1"	"100.000"	"96.5124"	"33167"	"33167"	"33160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"3.4"	""	""	""	"3.7"	"3.5"	""	"194"	"20"	"29.000"	"22.000"	"0.0878560622871254"	"14"	"0.0006396"	"0.006244"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTIAPGLFATPLLTTLPDK"	"[R].vVTIAPGLFATPLLTTLPDk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"842.51685"	"2525.53598"	"2525.53587"	"0.05"	"0.00004"	"11/184"	"11"	"184"	"170755.976928711"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"95.9985"	"33019"	"33019"	"33011"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"5.7"	""	"6.3"	""	"9.5"	""	"6.9"	"5.9"	""	"189"	"37"	"29.000"	"22.000"	"0.00203906846664927"	"15"	"0"	"0.000128"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTIAPGLFATPLLTTLPDK"	"[R].vVTIAPGLFATPLLTTLPDk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"842.51697"	"2525.53635"	"2525.53587"	"0.19"	"0.00016"	"19/184"	"19"	"184"	"1112291.77911377"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"96.2502"	"33090"	"33090"	"33086"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.4"	""	"32.8"	""	"32.0"	""	"38.2"	""	"29.2"	"45.6"	""	"186"	"65"	"29.000"	"22.000"	"2.66982594128296E-06"	"17"	"0"	"9.228E-06"	"1.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLMGmFEk.[R]"	"N-Term(TMT6plex); M16(Oxidation); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"843.76825"	"2529.29020"	"2529.29808"	"-3.12"	"-0.00263"	"11/188"	"11"	"188"	"215667.07220459"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"79.5285"	"26904"	"26904"	"26879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.0"	""	"15.1"	""	"14.7"	""	"15.3"	""	"19.0"	"21.9"	""	"1262"	"32"	"38.000"	"31.000"	"0.0387283825258986"	"15"	"0.0001889"	"0.0008288"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLmGMFEk.[R]"	"N-Term(TMT6plex); M14(Oxidation); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"843.76825"	"2529.29020"	"2529.29808"	"-3.12"	"-0.00263"	"11/188"	"11"	"188"	"215667.07220459"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"79.5285"	"26904"	"26904"	"26879"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"19.0"	""	"15.1"	""	"14.7"	""	"15.3"	""	"19.0"	"21.9"	""	"1262"	"32"	"38.000"	"31.000"	"0.0394483969141458"	"15"	"0.0001889"	"0.000628"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLMGmFEk.[R]"	"N-Term(TMT6plex); M16(Oxidation); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.2258"	"0.0000"	"1"	"1"	"1"	"843.77002"	"2529.29551"	"2529.29808"	"-1.02"	"-0.00086"	"11/188"	"11"	"188"	"295876.917663574"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"80.1104"	"27141"	"27141"	"27119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.9"	""	"12.2"	""	"15.7"	""	"14.0"	""	"22.2"	"19.8"	""	"1293"	"31"	"38.000"	"31.000"	"0.0507654837775411"	"17"	"0"	"9.262E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLMGmFEk.[R]"	"N-Term(TMT6plex); M16(Oxidation); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.2909"	"0.0000"	"1"	"1"	"1"	"843.77075"	"2529.29770"	"2529.29808"	"-0.15"	"-0.00013"	"14/188"	"14"	"188"	"301737.809204102"	"HCD"	"MS2"	"6.64048"	"10.9"	"100.000"	"80.1272"	"27097"	"27097"	"27073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.0"	""	"18.5"	""	"15.5"	""	"15.5"	""	"17.6"	"21.0"	""	"1292"	"55"	"38.000"	"31.000"	"0.000191528107763272"	"23"	"0"	"2.22E-05"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLMGmFEk.[R]"	"N-Term(TMT6plex); M16(Oxidation); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.1481"	"0.0000"	"1"	"1"	"1"	"843.77100"	"2529.29844"	"2529.29808"	"0.14"	"0.00012"	"14/188"	"14"	"188"	"555928.437683105"	"HCD"	"MS2"	"3.000379"	"20.5"	"100.000"	"79.3699"	"26788"	"26788"	"26769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.0"	""	"28.4"	""	"30.7"	""	"29.1"	""	"39.9"	"41.9"	""	"1292"	"54"	"38.000"	"31.000"	"0.000282639279932231"	"23"	"0"	"8.937E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPSTETEALASNLMGMFEK"	"[K].vPSTETEALASNLMGmFEk.[R]"	"N-Term(TMT6plex); M16(Oxidation); K19(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.2745"	"0.0000"	"1"	"1"	"1"	"843.77277"	"2529.30375"	"2529.29808"	"2.24"	"0.00189"	"16/188"	"16"	"188"	"479287.475769043"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"79.2259"	"26781"	"26781"	"26751"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"26.1"	""	"21.9"	""	"21.4"	""	"23.6"	""	"35.7"	"28.8"	""	"1302"	"51"	"38.000"	"31.000"	"0.000561799034596298"	"19"	"0"	"4.749E-05"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASQVAALDLGYKPGVEAIR"	"[R].iASQVAALDLGYkPGVEAIR.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"843.83075"	"2529.47770"	"2529.48048"	"-1.10"	"-0.00093"	"13/212"	"13"	"212"	"727848.176391602"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"61.7337"	"19661"	"19661"	"19635"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.8"	""	"68.4"	""	"61.3"	""	"64.7"	""	"100.2"	"101.7"	""	"526"	"41"	"34.000"	"27.000"	"0.00219763593794818"	"15"	"0"	"9.953E-06"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASQVAALDLGYKPGVEAIR"	"[R].iASQVAALDLGYkPGVEAIR.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"843.83099"	"2529.47843"	"2529.48048"	"-0.81"	"-0.00068"	"14/212"	"14"	"212"	"438654.637634277"	"HCD"	"MS2"	"0"	"31.0"	"100.000"	"61.6461"	"19572"	"19572"	"19545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.0"	""	"40.2"	""	"48.7"	""	"50.3"	""	"61.4"	"52.9"	""	"526"	"21"	"34.000"	"27.000"	"0.191847325196952"	"14"	"0"	"6.941E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLDLIAPSPADAQHWVQGLR"	"[R].nTLDLIAPSPADAQHWVQGLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"844.45587"	"2531.35306"	"2531.35679"	"-1.47"	"-0.00124"	"18/220"	"18"	"220"	"553752.527709961"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"69.0753"	"22598"	"22598"	"22570"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.5"	""	"22.4"	""	"17.1"	""	"23.1"	""	"20.4"	"27.3"	""	"1360"	"60"	"38.000"	"31.000"	"6.52392429430835E-05"	"21"	"0"	"1.468E-06"	"1.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLDLIAPSPADAQHWVQGLR"	"[R].nTLDLIAPSPADAQHWVQGLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"844.45691"	"2531.35617"	"2531.35679"	"-0.24"	"-0.00020"	"19/220"	"19"	"220"	"638484.53692627"	"HCD"	"MS2"	"10.18623"	"17.1"	"100.000"	"68.8779"	"22569"	"22569"	"22538"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.6"	""	"22.7"	""	"22.6"	""	"28.1"	""	"31.0"	"37.3"	""	"1328"	"63"	"38.000"	"31.000"	"3.07020998209109E-05"	"20"	"0"	"7.47E-07"	"1.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFSLFDKDGDGTITTK"	"[K].eAFSLFDkDGDGTITTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"844.79730"	"2532.37735"	"2532.38005"	"-1.06"	"-0.00090"	"12/176"	"12"	"176"	"4059217.68017578"	"HCD"	"MS2"	"0"	"322.4"	"100.000"	"57.3367"	"17870"	"17870"	"17845"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"591.8"	""	"432.0"	""	"439.5"	""	"725.1"	""	"441.5"	"415.8"	""	"1241"	"20"	"37.000"	"30.000"	"0.637884112987477"	"14"	"0"	"5.665E-05"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFSLFDKDGDGTITTK"	"[K].eAFSLFDkDGDGTITTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.85016"	"2532.37880"	"2532.38005"	"-0.49"	"-0.00031"	"9/176"	"9"	"176"	"4588761.60107422"	"HCD"	"MS2"	"15.44347"	"146.9"	"100.000"	"57.2853"	"17795"	"17795"	"17771"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"237.6"	""	"192.4"	""	"193.8"	""	"293.5"	"0.8"	"237.5"	"233.1"	""	"1249"	"12"	"37.000"	"30.000"	"3.64361467618954"	"13"	"0.0001889"	"0.0006397"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFSLFDKDGDGTITTK"	"[K].eAFSLFDkDGDGTITTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"1"	"4"	"4"	"0.8333"	"0.0000"	"1"	"1"	"1"	"633.85065"	"2532.38076"	"2532.38005"	"0.28"	"0.00018"	"14/176"	"14"	"176"	"4113674.16638184"	"HCD"	"MS2"	"35.02181"	"101.7"	"100.000"	"57.5834"	"17971"	"17971"	"17941"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"150.1"	""	"125.4"	""	"149.5"	""	"165.4"	"2.5"	"178.7"	"191.7"	""	"1220"	"12"	"37.000"	"30.000"	"4.26903617561387"	"15"	"0.0001889"	"0.0005042"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFSLFDKDGDGTITTK"	"[K].eAFSLFDkDGDGTITTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"844.79883"	"2532.38193"	"2532.38005"	"0.74"	"0.00063"	"12/176"	"12"	"176"	"3383148.03125"	"HCD"	"MS2"	"0"	"298.5"	"100.000"	"57.1353"	"17734"	"17734"	"17707"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"576.6"	""	"405.2"	""	"389.5"	""	"697.0"	""	"407.1"	"351.1"	""	"1205"	"27"	"37.000"	"30.000"	"0.112968419111062"	"14"	"0"	"2.124E-05"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGWGDVGGWTGQGGSILGTK"	"[K].eIGWGDVGGWTGQGGSILGTk.[R]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.11938"	"2533.34360"	"2533.34511"	"-0.59"	"-0.00050"	"20/214"	"20"	"214"	"621715.220458984"	"HCD"	"MS2"	"43.64336"	"26.3"	"100.000"	"75.2168"	"25156"	"25156"	"25135"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.9"	""	"39.5"	""	"46.8"	""	"34.9"	""	"37.2"	"44.5"	""	"1449"	"66"	"38.000"	"31.000"	"1.77434631871652E-05"	"17"	"0"	"1.075E-06"	"1.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGWGDVGGWTGQGGSILGTK"	"[K].eIGWGDVGGWTGQGGSILGTk.[R]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"0.9863"	"0.0000"	"1"	"1"	"1"	"845.11963"	"2533.34433"	"2533.34511"	"-0.31"	"-0.00026"	"20/214"	"20"	"214"	"570037.099853516"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"75.2056"	"25100"	"25100"	"25073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.5"	""	"46.5"	""	"38.8"	""	"31.2"	""	"41.0"	"40.6"	""	"1464"	"73"	"38.000"	"31.000"	"3.9765924265246E-06"	"18"	"0"	"9.023E-07"	"1.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALFEEVPELLTEAEKK"	"[K].aLFEEVPELLTEAEkk.[E]"	"N-Term(TMT6plex); K15(TMT6plex); K16(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.16260"	"2533.47324"	"2533.47322"	"0.01"	"0.00001"	"12/142"	"12"	"142"	"254182.915100098"	"HCD"	"MS2"	"35.32534"	"18.1"	"100.000"	"81.0683"	"27481"	"27481"	"27456"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.5"	""	"22.9"	""	"26.8"	""	"25.5"	""	"30.9"	"29.0"	""	"569"	"28"	"34.000"	"27.000"	"0.0468902200389008"	"14"	"0.0001308"	"0.0002917"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDPGTQLYTMTSSLEYK"	"[K].eIDPGTQLYTMTSSLEYk.[T]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"3"	"3"	"0.9104"	"0.0000"	"1"	"1"	"1"	"845.44012"	"2534.30582"	"2534.31003"	"-1.66"	"-0.00140"	"17/188"	"17"	"188"	"707728.369995117"	"HCD"	"MS2"	"31.49521"	"29.9"	"100.000"	"72.9610"	"24236"	"24236"	"24207"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"47.7"	""	"43.9"	""	"41.7"	""	"49.1"	""	"47.2"	"54.6"	""	"1405"	"67"	"38.000"	"31.000"	"1.33550749164612E-05"	"22"	"0"	"3.199E-06"	"1.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDPGTQLYTMTSSLEYK"	"[K].eIDPGTQLYTMTSSLEYk.[T]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"845.44031"	"2534.30637"	"2534.31003"	"-1.44"	"-0.00122"	"17/188"	"17"	"188"	"659840.11151123"	"HCD"	"MS2"	"5.756627"	"25.7"	"100.000"	"73.0068"	"24203"	"24203"	"24177"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.2"	""	"36.9"	""	"36.6"	""	"39.9"	""	"42.8"	"46.3"	""	"1393"	"70"	"38.000"	"31.000"	"6.39618653450813E-06"	"19"	"0"	"1.562E-06"	"1.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFFDPNTHENLTYLQLLER"	"[K].gFFDPNTHENLTYLQLLER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"846.10590"	"2536.30313"	"2536.30335"	"-0.09"	"-0.00007"	"14/198"	"14"	"198"	"1144571.60247803"	"HCD"	"MS2"	"28.18257"	"27.7"	"100.000"	"72.5235"	"24057"	"24057"	"24031"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.1"	""	"55.8"	""	"48.8"	""	"36.8"	""	"43.9"	"41.9"	""	"1505"	"27"	"38.000"	"31.000"	"0.157219533846767"	"16"	"0"	"4.634E-05"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLISPDLGVVFLNVPENLK"	"[K].nLISPDLGVVFLNVPENLk.[N]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.16809"	"2539.48972"	"2539.48998"	"-0.10"	"-0.00009"	"12/204"	"12"	"204"	"137763.129089355"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"92.8587"	"32050"	"32050"	"32036"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.3"	""	"4.1"	""	"7.8"	""	"7.4"	""	"7.1"	"5.0"	""	"519"	"34"	"34.000"	"27.000"	"0.0101423212458128"	"15"	"0.0001308"	"0.0002398"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLISPDLGVVFLNVPENLK"	"[K].nLISPDLGVVFLNVPENLk.[N]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.16846"	"2539.49082"	"2539.48998"	"0.33"	"0.00028"	"8/204"	"8"	"204"	"92211.2862548828"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"92.6546"	"31956"	"31956"	"31946"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.2"	""	"4.6"	""	"5.9"	""	"5.0"	""	"6.7"	"9.2"	""	"512"	"26"	"34.000"	"27.000"	"0.0615516876801774"	"14"	"0.0001889"	"0.000885"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFTLGNSEFPVSWDNEVK"	"[R].iFTLGNSEFPVSWDNEVk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"G3V6U9"	"Actin-histidine N-methyltransferase OS=Rattus norvegicus OX=10116 GN=Setd3 PE=1 SV=1"	"G3V6U9"	"Actin-histidine N-methyltransferase OS=Rattus norvegicus OX=10116 GN=Setd3 PE=1 SV=1"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"847.45203"	"2540.34153"	"2540.34371"	"-0.86"	"-0.00073"	"13/186"	"13"	"186"	"116530.585632324"	"HCD"	"MS2"	"12.44552"	"6.3"	"100.000"	"83.0667"	"28347"	"28347"	"28317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.9"	""	"8.6"	""	"12.1"	""	"10.4"	""	"9.5"	"12.9"	""	"1432"	"45"	"38.000"	"31.000"	"0.00247122917364473"	"17"	"0"	"2.108E-05"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLGSTQGQTIALPAQGLIEFR"	"[R].gPGLGSTQGQTIALPAQGLIEFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.47217"	"2540.40195"	"2540.40340"	"-0.57"	"-0.00048"	"19/236"	"19"	"236"	"358273.829162598"	"HCD"	"MS2"	"7.941984"	"7.4"	"100.000"	"72.0139"	"23849"	"23849"	"23823"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.8"	""	"5.9"	""	"8.7"	""	"15.4"	""	"11.8"	"18.5"	""	"1166"	"72"	"37.000"	"30.000"	"3.76416415527204E-06"	"17"	"0"	"1.95E-06"	"1.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLGSTQGQTIALPAQGLIEFR"	"[R].gPGLGSTQGQTIALPAQGLIEFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.47345"	"2540.40580"	"2540.40340"	"0.94"	"0.00080"	"20/236"	"20"	"236"	"458981.534057617"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"72.0339"	"23806"	"23806"	"23777"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.2"	""	"7.7"	""	"14.7"	""	"14.6"	""	"16.9"	"16.7"	""	"1168"	"85"	"37.000"	"30.000"	"1.96522756515286E-07"	"18"	"0"	"2.843E-07"	"1.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKLPGPTVSASYSLEYGK"	"[R].gkLPGPTVSASYSLEYGk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.82275"	"2541.45371"	"2541.45315"	"0.22"	"0.00019"	"10/184"	"10"	"184"	"780842.418884277"	"HCD"	"MS2"	"0"	"38.2"	"100.000"	"47.0364"	"13635"	"13635"	"13608"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.7"	""	"56.7"	""	"56.7"	""	"52.0"	"0.5"	"56.7"	"62.5"	""	"816"	"78"	"36.000"	"29.000"	"6.99294581463438E-07"	"17"	"0"	"1.195E-06"	"1.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKLPGPTVSASYSLEYGK"	"[R].gkLPGPTVSASYSLEYGk.[A]"	"N-Term(TMT6plex); K2(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.82300"	"2541.45444"	"2541.45315"	"0.51"	"0.00043"	"11/184"	"11"	"184"	"1332855.0559082"	"HCD"	"MS2"	"0"	"67.7"	"100.000"	"47.1803"	"13742"	"13742"	"13714"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"141.6"	""	"107.6"	""	"92.1"	""	"88.7"	"1.5"	"112.1"	"95.7"	""	"814"	"64"	"36.000"	"29.000"	"1.63905832970462E-05"	"16"	"0"	"8.45E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTGIDINPNALFPPVEFPVPR"	"[K].VHLTGIDINPNALFPPVEFPVPR.[G]"	""	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"848.13080"	"2542.37784"	"2542.38165"	"-1.50"	"-0.00127"	"11/232"	"11"	"232"	"159707.58782959"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"82.7369"	"28212"	"28212"	"28189"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	"8.4"	""	"6.2"	""	"8.5"	""	"9.9"	"6.6"	"NoQuanLabels"	"1403"	"35"	"38.000"	"31.000"	"0.0206551177610983"	"15"	"0"	"3.871E-05"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTGIDINPNALFPPVEFPVPR"	"[K].VHLTGIDINPNALFPPVEFPVPR.[G]"	""	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"848.13147"	"2542.37986"	"2542.38165"	"-0.71"	"-0.00060"	"6/232"	"6"	"232"	"220825.078308105"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"82.7883"	"28182"	"28182"	"28160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.5"	""	"3.0"	""	"5.1"	""	"5.1"	""	"7.8"	"6.7"	"NoQuanLabels"	"1412"	"32"	"38.000"	"31.000"	"0.0446482767071611"	"14"	"0"	"6.181E-05"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTGIDINPNALFPPVEFPVPR"	"[K].VHLTGIDINPNALFPPVEFPVPR.[G]"	""	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"848.13275"	"2542.38370"	"2542.38165"	"0.80"	"0.00068"	"10/232"	"10"	"232"	"149582.539489746"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"82.4556"	"28047"	"28047"	"28016"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"6.8"	""	"8.8"	""	"6.3"	""	"9.9"	"7.1"	"NoQuanLabels"	"1383"	"30"	"38.000"	"31.000"	"0.0642380256458326"	"14"	"0.0001308"	"0.0002101"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPVIPVVSSTVLPSTYQIR"	"[K].kPVIPVVSSTVLPSTYQIR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"P0C0R5"	"Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Pik3r4 PE=3 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"848.18353"	"2542.53604"	"2542.53727"	"-0.48"	"-0.00041"	"13/194"	"13"	"194"	"625744.782531738"	"HCD"	"MS2"	"71.80914"	"33.6"	"100.000"	"60.0895"	"18990"	"18990"	"18964"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.8"	""	"44.6"	""	"50.5"	""	"45.3"	"1.6"	"61.9"	"61.2"	""	"263"	"8"	"31.000"	"24.000"	"2.23833843853936"	"13"	"0.000523"	"0.0031"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNNASLIGLGYTQSLRPGVK"	"[K].vNNASLIGLGYTQSLRPGVk.[L]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.16577"	"2545.48276"	"2545.48663"	"-1.52"	"-0.00129"	"17/206"	"17"	"206"	"909030.953369141"	"HCD"	"MS2"	"42.84153"	"46.7"	"100.000"	"53.9721"	"16441"	"16441"	"16425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.9"	""	"67.6"	""	"68.3"	""	"69.0"	"2.7"	"78.8"	"88.9"	""	"564"	"34"	"34.000"	"27.000"	"0.011278441943263"	"15"	"0"	"9.628E-06"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNNASLIGLGYTQSLRPGVK"	"[K].vNNASLIGLGYTQSLRPGVk.[L]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.16602"	"2545.48349"	"2545.48663"	"-1.23"	"-0.00104"	"20/206"	"20"	"206"	"1299869.43103027"	"HCD"	"MS2"	"57.47005"	"76.0"	"100.000"	"54.0363"	"16521"	"16521"	"16507"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"95.7"	""	"114.5"	""	"117.0"	""	"136.0"	"0.0"	"121.7"	"133.8"	""	"558"	"40"	"34.000"	"27.000"	"0.00308037934952678"	"15"	"0"	"4.135E-06"	"1.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNNASLIGLGYTQSLRPGVK"	"[K].vNNASLIGLGYTqSLRPGVk.[L]"	"N-Term(TMT6plex); Q13(Deamidated); K20(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"3"	"3"	"0.4333"	"0.0000"	"1"	"1"	"1"	"849.49939"	"2546.48362"	"2546.47064"	"5.09"	"0.00432"	"19/206"	"19"	"206"	"959876.407836914"	"HCD"	"MS2"	"52.10347"	"62.0"	"100.000"	"53.8896"	"16408"	"16408"	"16395"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.5"	""	"94.1"	"2.2"	"91.9"	""	"104.8"	""	"99.0"	"124.6"	""	"577"	"30"	"34.000"	"27.000"	"0.0276787082192347"	"14"	"0.0001308"	"0.0002409"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNNASLIGLGYTQSLRPGVK"	"[K].vNNASLIGLGYTqSLRPGVk.[L]"	"N-Term(TMT6plex); Q13(Deamidated); K20(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.49988"	"2546.48508"	"2546.47064"	"5.67"	"0.00481"	"13/206"	"13"	"206"	"612184.575927734"	"HCD"	"MS2"	"45.72579"	"34.3"	"100.000"	"54.2013"	"16588"	"16588"	"16561"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.1"	""	"47.5"	""	"51.5"	""	"59.1"	"0.4"	"54.0"	"59.7"	""	"564"	"21"	"34.000"	"27.000"	"0.234017916439067"	"14"	"0.0001889"	"0.0008219"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEKEFEPLLNWMK"	"[R].eATEkEFEPLLNWMk.[D]"	"N-Term(TMT6plex); K5(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"1"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"851.47150"	"2552.39994"	"2552.40376"	"-1.50"	"-0.00127"	"12/146"	"12"	"146"	"667085.554748535"	"HCD"	"MS2"	"25.3308"	"53.6"	"100.000"	"72.4210"	"23964"	"23964"	"23937"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"166.3"	""	"79.9"	""	"82.4"	""	"44.0"	"0.6"	"58.7"	"71.4"	""	"1190"	"45"	"37.000"	"30.000"	"0.00207738487709759"	"23"	"0"	"4.617E-06"	"1.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATEKEFEPLLNWMK"	"[R].eATEkEFEPLLNWMk.[D]"	"N-Term(TMT6plex); K5(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"1"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"851.47192"	"2552.40122"	"2552.40376"	"-0.99"	"-0.00085"	"14/146"	"14"	"146"	"840058.469665527"	"HCD"	"MS2"	"41.35107"	"64.9"	"100.000"	"72.4011"	"24007"	"24007"	"23983"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"197.6"	""	"103.3"	""	"99.4"	""	"55.8"	"0.1"	"70.2"	"83.5"	""	"1189"	"35"	"37.000"	"30.000"	"0.0185417985774385"	"17"	"0"	"2.142E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQKPDVLTTGGGNPIGDK"	"[R].aPQkPDVLTTGGGNPIGDk.[L]"	"N-Term(TMT6plex); K4(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9552"	"0.0000"	"1"	"1"	"1"	"851.49133"	"2552.45945"	"2552.46511"	"-2.22"	"-0.00189"	"14/200"	"14"	"200"	"2920026.85888672"	"HCD"	"MS2"	"0"	"157.3"	"94.762"	"41.5221"	"11442"	"11442"	"11421"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"291.8"	""	"200.8"	""	"207.4"	""	"256.1"	""	"272.1"	"263.2"	""	"734"	"67"	"35.000"	"28.000"	"7.28896834670156E-06"	"20"	"0"	"9.505E-08"	"1.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQKPDVLTTGGGNPIGDK"	"[R].aPQkPDVLTTGGGNPIGDk.[L]"	"N-Term(TMT6plex); K4(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9420"	"0.0000"	"1"	"1"	"1"	"851.49225"	"2552.46219"	"2552.46511"	"-1.14"	"-0.00097"	"11/200"	"11"	"200"	"2443082.9005127"	"HCD"	"MS2"	"0"	"139.4"	"100.000"	"41.2974"	"11306"	"11306"	"11285"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.8"	""	"160.4"	""	"196.3"	""	"234.8"	"1.2"	"235.0"	"223.1"	""	"713"	"69"	"35.000"	"28.000"	"4.44692222827609E-06"	"21"	"0"	"2.792E-08"	"1.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALVTGGEIASTFDHPELVK"	"[R].lALVTGGEIASTFDHPELVk.[L]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"852.48804"	"2555.44956"	"2555.44851"	"0.41"	"0.00035"	"15/176"	"15"	"176"	"683835.495483398"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"72.1338"	"23898"	"23898"	"23871"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.2"	""	"30.0"	""	"31.0"	""	"53.3"	""	"64.4"	"60.7"	""	"919"	"45"	"36.000"	"29.000"	"0.0013040237935689"	"24"	"0"	"6.032E-06"	"1.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALVTGGEIASTFDHPELVK"	"[R].lALVTGGEIASTFDHPELVk.[L]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"852.48822"	"2555.45011"	"2555.44851"	"0.63"	"0.00053"	"18/176"	"18"	"176"	"693065.948913574"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"72.1536"	"23855"	"23855"	"23825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"38.4"	""	"28.8"	""	"34.7"	""	"69.0"	""	"64.6"	"62.6"	""	"933"	"58"	"36.000"	"29.000"	"6.63516379192796E-05"	""	"0"	"1.614E-06"	"1.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVQDVLPALPNPDDYFLLR"	"[R].eNVQDVLPALPNPDDYFLLR.[W]"	"N-Term(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"853.12091"	"2557.34818"	"2557.34997"	"-0.70"	"-0.00060"	"5/216"	"5"	"216"	"127188.108276367"	"HCD"	"MS2"	"8.398438"	"4.4"	"100.000"	"89.8356"	"31009"	"31009"	"31001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"4.2"	""	"5.7"	""	"7.5"	""	"9.7"	"7.9"	""	"1374"	"20"	"38.000"	"31.000"	"0.748094974120069"	"15"	"0.0004557"	"0.002618"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVQDVLPALPNPDDYFLLR"	"[R].eNVQDVLPALPNPDDYFLLR.[W]"	"N-Term(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"1279.17859"	"2557.34990"	"2557.34997"	"-0.03"	"-0.00003"	"4/216"	"4"	"216"	"48466.1677246094"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"89.3395"	"30782"	"30782"	"30769"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	"3.4"	""	"3.4"	"2.6"	""	"1378"	"16"	"38.000"	"31.000"	"1.92849812922808"	"14"	"0.0006037"	"0.005364"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVQDVLPALPNPDDYFLLR"	"[R].eNVQDVLPALPNPDDYFLLR.[W]"	"N-Term(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"853.12158"	"2557.35019"	"2557.34997"	"0.09"	"0.00007"	"12/216"	"12"	"216"	"191985.820251465"	"HCD"	"MS2"	"20.89657"	"6.6"	"100.000"	"89.2930"	"30764"	"30764"	"30754"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.2"	""	"6.6"	""	"4.8"	""	"16.9"	""	"13.8"	"12.9"	""	"1377"	"20"	"38.000"	"31.000"	"0.633729530152058"	"17"	"0"	"7.856E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVQDVLPALPNPDDYFLLR"	"[R].eNVQDVLPALPNPDDYFLLR.[W]"	"N-Term(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1279.17883"	"2557.35039"	"2557.34997"	"0.16"	"0.00021"	"3/216"	"3"	"216"	"63670.4135131836"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"89.6256"	"30892"	"30892"	"30877"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.2"	""	""	""	"4.2"	""	""	""	"3.8"	"5.7"	""	"1370"	"2"	"38.000"	"31.000"	"46.5254488342771"	"13"	"0.001817"	"0.02526"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVQDVLPALPNPDDYFLLR"	"[R].eNVQDVLPALPNPDDYFLLR.[W]"	"N-Term(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"853.12170"	"2557.35056"	"2557.34997"	"0.23"	"0.00020"	"16/216"	"16"	"216"	"525857.550598145"	"HCD"	"MS2"	"2.433774"	"7.0"	"100.000"	"89.5676"	"30869"	"30869"	"30857"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.3"	""	"6.4"	""	"11.4"	""	"12.7"	""	"14.0"	"13.8"	""	"1372"	"53"	"38.000"	"31.000"	"0.000323835246306823"	"20"	"0"	"6.753E-07"	"1.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVQDVLPALPNPDDYFLLR"	"[R].eNVQDVLPALPNPDDYFLLR.[W]"	"N-Term(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.12183"	"2557.35093"	"2557.34997"	"0.37"	"0.00032"	"10/216"	"10"	"216"	"168057.312744141"	"HCD"	"MS2"	"18.24121"	"4.9"	"100.000"	"89.4667"	"30870"	"30870"	"30859"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.3"	""	"5.3"	""	"6.3"	""	"12.1"	""	"8.6"	"11.2"	""	"1369"	"12"	"38.000"	"31.000"	"3.86699359259021"	"13"	"0.0001889"	"0.0005486"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGINTTDIFQTVDLWEGK"	"[R].yGINTTDIFQTVDLWEGk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"853.45612"	"2558.35379"	"2558.35428"	"-0.19"	"-0.00016"	"6/186"	"6"	"186"	"84843.221862793"	"HCD"	"MS2"	"26.69652"	"4.2"	"100.000"	"91.2691"	"31494"	"31494"	"31486"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"4.1"	""	"6.2"	""	"8.1"	""	"8.0"	"6.9"	""	"1434"	"7"	"38.000"	"31.000"	"15.4710274136246"	"14"	"0.0006037"	"0.00521"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGINTTDIFQTVDLWEGK"	"[R].yGINTTDIFQTVDLWEGk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.45630"	"2558.35434"	"2558.35428"	"0.03"	"0.00002"	"8/186"	"8"	"186"	"67760.3936157227"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"91.5528"	"31586"	"31586"	"31580"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.9"	""	"3.5"	""	"2.2"	""	"4.6"	""	"6.4"	"3.6"	""	"1438"	"12"	"38.000"	"31.000"	"4.7068340915437"	"13"	"0.0008731"	"0.009281"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGINTTDIFQTVDLWEGK"	"[R].yGINTTDIFQTVDLWEGk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"853.45734"	"2558.35746"	"2558.35428"	"1.24"	"0.00106"	"5/186"	"5"	"186"	"80277.8201293945"	"HCD"	"MS2"	"12.47886"	"2.6"	"100.000"	"91.4469"	"31585"	"31585"	"31577"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"3.7"	""	"2.8"	""	"8.6"	""	"5.4"	"4.5"	""	"1448"	"9"	"38.000"	"31.000"	"9.61033587396332"	"14"	"0.0008731"	"0.009339"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGGNDVGIFVAGVLEDSPAAK"	"[R].lAGGNDVGIFVAGVLEDSPAAk.[E]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"853.48022"	"2558.42612"	"2558.42302"	"1.21"	"0.00103"	"9/226"	"9"	"226"	"127991.330322266"	"HCD"	"MS2"	"22.29514"	"4.8"	"100.000"	"86.4195"	"29707"	"29707"	"29684"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.0"	""	"5.2"	""	"7.4"	""	"7.7"	""	"8.0"	"13.1"	""	"1180"	"24"	"37.000"	"30.000"	"0.239250035914546"	"17"	"0.0001889"	"0.0003859"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGGNDVGIFVAGVLEDSPAAK"	"[R].lAGGNDVGIFVAGVLEDSPAAk.[E]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"853.48181"	"2558.43088"	"2558.42302"	"3.07"	"0.00262"	"7/226"	"7"	"226"	"106897.296203613"	"HCD"	"MS2"	"9.4427"	"3.6"	"100.000"	"86.3816"	"29639"	"29639"	"29617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.0"	""	"4.8"	""	"4.5"	""	"4.1"	""	"8.3"	"8.0"	""	"1140"	"20"	"37.000"	"30.000"	"0.531954951454285"	"16"	"0.0003571"	"0.001513"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAILLGMLDPAEKDEK"	"[R].dLAILLGMLDPAEkDEk.[G]"	"N-Term(TMT6plex); K14(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.37115"	"2558.46279"	"2558.47184"	"-3.54"	"-0.00226"	"5/164"	"5"	"164"	"167067.104003906"	"HCD"	"MS2"	"14.88539"	"5.8"	"100.000"	"89.0923"	"30691"	"30691"	"30684"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.1"	""	"5.8"	""	"6.2"	""	"12.5"	""	"11.5"	"14.4"	""	"815"	"2"	"36.000"	"29.000"	"23.4491774464892"	"13"	"0.002925"	"0.05039"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAILLGMLDPAEKDEK"	"[R].dLAILLGMLDPAEkDEk.[G]"	"N-Term(TMT6plex); K14(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.49677"	"2558.47574"	"2558.47184"	"1.53"	"0.00130"	"5/164"	"5"	"164"	"94533.8827514648"	"HCD"	"MS2"	"14.12892"	"4.2"	"100.000"	"89.1270"	"30748"	"30748"	"30742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.5"	""	"4.0"	""	"5.5"	""	"6.2"	""	"9.0"	"11.0"	""	"678"	"13"	"35.000"	"28.000"	"1.56386657775969"	"13"	"0.002424"	"0.03603"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAILLGMLDPAEKDEK"	"[R].dLAILLGMLDPAEkDEk.[G]"	"N-Term(TMT6plex); K14(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.49719"	"2558.47702"	"2558.47184"	"2.03"	"0.00173"	"5/164"	"5"	"164"	"89567.2349243164"	"HCD"	"MS2"	"9.27981"	"5.5"	"100.000"	"89.0285"	"30669"	"30669"	"30661"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	""	""	"6.2"	""	"11.8"	""	"13.3"	"17.1"	""	"673"	"5"	"35.000"	"28.000"	"9.61579217845669"	"13"	"0.002099"	"0.03195"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIIGMDKPLSLPDFLAK"	"[R].nIIGMDkPLSLPDFLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"853.84332"	"2559.51542"	"2559.51873"	"-1.29"	"-0.00110"	"11/174"	"11"	"174"	"493355.296386719"	"HCD"	"MS2"	"10.35041"	"35.7"	"100.000"	"79.0261"	"26648"	"26648"	"26625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"43.2"	""	"26.1"	""	"36.2"	""	"31.2"	""	"44.6"	"159.7"	""	"457"	"27"	"33.000"	"26.000"	"0.0409153437647065"	"16"	"0"	"0.0001346"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIIGMDKPLSLPDFLAK"	"[R].nIIGMDkPLSLPDFLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.84393"	"2559.51725"	"2559.51873"	"-0.58"	"-0.00049"	"9/174"	"9"	"174"	"495495.772155762"	"HCD"	"MS2"	"12.39035"	"36.6"	"100.000"	"78.9814"	"26681"	"26681"	"26655"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.0"	""	"28.5"	""	"31.2"	""	"34.6"	"0.5"	"41.6"	"170.1"	""	"445"	"15"	"33.000"	"26.000"	"0.73001202717669"	"14"	"0"	"8.08E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIIGMDKPLSLPDFLAK"	"[R].nIIGMDkPLSLPDFLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.84448"	"2559.51889"	"2559.51873"	"0.06"	"0.00006"	"14/174"	"14"	"174"	"352621.398132324"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"79.1807"	"26711"	"26711"	"26689"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.7"	""	"20.1"	""	"21.1"	""	"25.7"	"1.1"	"24.3"	"100.1"	""	"435"	"11"	"33.000"	"26.000"	"1.80077420607433"	"13"	"0.0001889"	"0.0006115"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KGFFIEPTVFSNVTDDMR"	"[R].kGFFIEPTVFSNVTDDMR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.45148"	"2561.33988"	"2561.34742"	"-2.94"	"-0.00251"	"12/190"	"12"	"190"	"317382.758544922"	"HCD"	"MS2"	"55.7594"	"16.5"	"100.000"	"70.0436"	"22993"	"22993"	"22966"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.5"	""	"25.7"	""	"25.8"	""	"17.5"	""	"26.9"	"30.7"	""	"1485"	"14"	"38.000"	"31.000"	"2.96958976697615"	"13"	"0.0006037"	"0.003881"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNNSSLIGVGYTQTLRPGVK"	"[K].vNNSSLIGVGYTQTLRPGVk.[L]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"854.49841"	"2561.48069"	"2561.48154"	"-0.33"	"-0.00029"	"15/208"	"15"	"208"	"1274946.62634277"	"HCD"	"MS2"	"0"	"76.7"	"100.000"	"47.9928"	"14074"	"14074"	"14050"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"93.2"	""	"139.6"	""	"126.1"	""	"106.5"	""	"116.7"	"144.4"	""	"700"	"45"	"35.000"	"28.000"	"0.0010741576959369"	""	"0"	"4.437E-07"	"1.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VNNSSLIGVGYTQTLRPGVK"	"[K].vNNSSLIGVGYTQTLRPGVk.[L]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"3"	"3"	"0.0263"	"0.0000"	"1"	"1"	"1"	"854.50024"	"2561.48618"	"2561.48154"	"1.81"	"0.00155"	"14/208"	"14"	"208"	"1415457.62750244"	"HCD"	"MS2"	"0"	"84.4"	"100.000"	"47.7037"	"13908"	"13908"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.2"	""	"132.7"	""	"143.1"	""	"110.7"	""	"154.6"	"164.5"	""	"655"	"38"	"35.000"	"28.000"	"0.00479966917913061"	"15"	"0"	"7.379E-08"	"1.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VNNSSLIGLGYTQTLKPGIK"	"[K].vNNSSLIGLGYTQTLKPGIk.[L]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0263"	"2"	"2"	"2"	"854.50024"	"2561.48618"	"2561.50669"	"-8.01"	"-0.00684"	"8/208"	"8"	"208"	"1415457.62750244"	"HCD"	"MS2"	"0"	"84.4"	"100.000"	"47.7037"	"13908"	"13908"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.2"	""	"132.7"	""	"143.1"	""	"110.7"	""	"154.6"	"164.5"	""	"655"	"37"	"35.000"	"28.000"	"0.0062836401256952"	"15"	"0"	"3.984E-05"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VNNSSLIGLGYTQTLKPGIK"	"[K].vNNSSLIGLGYTQTLkPGIK.[L]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"3"	"3"	""	"0.0263"	"2"	"3"	"3"	"854.50024"	"2561.48618"	"2561.50669"	"-8.01"	"-0.00684"	"8/208"	"8"	"208"	"1415457.62750244"	"HCD"	"MS2"	"0"	"84.4"	"100.000"	"47.7037"	"13908"	"13908"	"13880"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.2"	""	"132.7"	""	"143.1"	""	"110.7"	""	"154.6"	"164.5"	""	"655"	"37"	"35.000"	"28.000"	"0.0062836401256952"	"15"	"0"	"5.632E-05"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGAAHAFAQYNLDQFTPVK"	"[R].eGAAHAFAQYNLDQFTPVk.[I]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"855.78711"	"2565.34677"	"2565.35019"	"-1.33"	"-0.00114"	"13/194"	"13"	"194"	"996719.78302002"	"HCD"	"MS2"	"9.079566"	"49.3"	"100.000"	"56.3182"	"17454"	"17454"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.3"	""	"71.9"	""	"71.9"	""	"75.5"	""	"85.0"	"91.2"	""	"1478"	"22"	"38.000"	"31.000"	"0.42918490454825"	"14"	"0"	"6.208E-06"	"1.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGAAHAFAQYNLDQFTPVK"	"[R].eGAAHAFAQYNLDQFTPVk.[I]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"Q3T1K5"	"F-actin-capping protein subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Capza2 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"855.78809"	"2565.34970"	"2565.35019"	"-0.19"	"-0.00016"	"15/194"	"15"	"194"	"1094840.18432617"	"HCD"	"MS2"	"10.91664"	"45.8"	"100.000"	"56.0870"	"17306"	"17306"	"17275"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"58.2"	""	"68.5"	""	"71.5"	""	"68.9"	"0.8"	"88.5"	"78.0"	""	"1476"	"29"	"38.000"	"31.000"	"0.0907938352859537"	"15"	"0"	"4.819E-06"	"1.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIKPQNLLVDPDTAVLK"	"[R].dIkPQNLLVDPDTAVLk.[L]"	"N-Term(TMT6plex); K3(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P18265"	"Glycogen synthase kinase-3 alpha OS=Rattus norvegicus OX=10116 GN=Gsk3a PE=1 SV=1"	"P18265"	"Glycogen synthase kinase-3 alpha OS=Rattus norvegicus OX=10116 GN=Gsk3a PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"856.18628"	"2566.54428"	"2566.54230"	"0.77"	"0.00066"	"13/180"	"13"	"180"	"329594.981323242"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"61.7013"	"19648"	"19648"	"19619"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.7"	""	"23.0"	""	"30.1"	""	"32.9"	""	"46.5"	"38.7"	""	"226"	"19"	"30.000"	"23.000"	"0.128256222170972"	"15"	"0.0001889"	"0.0007537"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIKPQNLLVDPDTAVLK"	"[R].dIkPQNLLVDPDTAVLk.[L]"	"N-Term(TMT6plex); K3(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P18265"	"Glycogen synthase kinase-3 alpha OS=Rattus norvegicus OX=10116 GN=Gsk3a PE=1 SV=1"	"P18265"	"Glycogen synthase kinase-3 alpha OS=Rattus norvegicus OX=10116 GN=Gsk3a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.18640"	"2566.54465"	"2566.54230"	"0.92"	"0.00078"	"9/180"	"9"	"180"	"186492.921569824"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"61.6162"	"19560"	"19560"	"19529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"18.5"	""	"18.9"	""	"22.6"	""	"28.8"	""	"28.7"	"32.9"	""	"225"	"6"	"30.000"	"23.000"	"2.93192274374876"	"13"	"0.002361"	"0.03506"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGLWFKPEELIDYK"	"[K].eIGLWFkPEELIDYk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"856.49438"	"2567.46860"	"2567.47282"	"-1.64"	"-0.00141"	"9/152"	"9"	"152"	"195354.51574707"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"81.2779"	"27617"	"27617"	"27598"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.7"	""	"27.3"	""	"24.9"	""	"31.6"	""	"35.2"	"32.8"	""	"762"	"15"	"35.000"	"28.000"	"1.1038879069142"	"14"	"0.0001308"	"0.0002718"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGLWFKPEELIDYK"	"[K].eIGLWFkPEELIDYk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.49567"	"2567.47245"	"2567.47282"	"-0.15"	"-0.00013"	"8/152"	"8"	"152"	"271075.72076416"	"HCD"	"MS2"	"6.392624"	"24.2"	"100.000"	"81.3037"	"27577"	"27577"	"27552"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.5"	""	"27.9"	""	"31.2"	""	"45.2"	""	"41.5"	"50.2"	""	"728"	"23"	"35.000"	"28.000"	"0.179515264639596"	"14"	"0.0001308"	"0.0002539"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGLWFKPEELIDYK"	"[K].eIGLWFkPEELIDYk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"856.49628"	"2567.47428"	"2567.47282"	"0.57"	"0.00048"	"10/152"	"10"	"152"	"200894.543029785"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"81.6200"	"27706"	"27706"	"27680"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.6"	""	"30.8"	""	"17.8"	""	"33.0"	""	"37.5"	"36.7"	""	"714"	"17"	"35.000"	"28.000"	"0.664765107788644"	"18"	"0"	"0.0001821"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGLWFKPEELIDYK"	"[K].eIGLWFkPEELIDYk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.49652"	"2567.47501"	"2567.47282"	"0.85"	"0.00073"	"10/152"	"10"	"152"	"224831.196960449"	"HCD"	"MS2"	"0"	"18.7"	"100.000"	"81.6451"	"27767"	"27767"	"27742"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.5"	""	"23.4"	""	"27.1"	""	"31.4"	"0.7"	"29.7"	"41.6"	""	"712"	"17"	"35.000"	"28.000"	"0.679907760049581"	"14"	"0.0001859"	"0.0003573"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGPPPNPPPIDPASLEEFK"	"[R].lPGPPPNPPPIDPASLEEFk.[K]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.47913"	"2570.42282"	"2570.42705"	"-1.64"	"-0.00141"	"10/190"	"10"	"190"	"929294.690429688"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"76.3383"	"25557"	"25557"	"25537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.0"	""	"22.6"	""	"19.7"	""	"47.9"	"0.3"	"64.1"	"63.9"	""	"1190"	"45"	"37.000"	"30.000"	"0.00186001722343875"	"15"	"0"	"2.526E-05"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGPPPNPPPIDPASLEEFK"	"[R].lPGPPPNPPPIDPASLEEFk.[K]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.48047"	"2570.42685"	"2570.42705"	"-0.08"	"-0.00006"	"11/190"	"11"	"190"	"783217.388977051"	"HCD"	"MS2"	"2.55003"	"20.3"	"100.000"	"76.3215"	"25601"	"25601"	"25583"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.4"	""	"18.0"	""	"16.9"	""	"41.8"	""	"50.9"	"53.2"	""	"1143"	"52"	"37.000"	"30.000"	"0.000363091627553272"	"16"	"0"	"8.49E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGPPPNPPPIDPASLEEFK"	"[R].lPGPPPNPPPIDPASLEEFk.[K]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.48071"	"2570.42759"	"2570.42705"	"0.21"	"0.00018"	"10/190"	"10"	"190"	"637198.236694336"	"HCD"	"MS2"	"0"	"18.7"	"100.000"	"76.0158"	"25478"	"25478"	"25455"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.8"	""	"13.3"	""	"17.6"	""	"43.3"	"1.0"	"45.0"	"43.6"	""	"1133"	"45"	"37.000"	"30.000"	"0.00169121925361703"	"15"	"0"	"1.557E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGPPPNPPPIDPASLEEFK"	"[R].lPGPPPNPPPIDPASLEEFk.[K]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.48102"	"2570.42850"	"2570.42705"	"0.57"	"0.00048"	"14/190"	"14"	"190"	"502044.096618652"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"76.0344"	"25438"	"25438"	"25409"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.9"	""	"15.9"	""	"15.7"	""	"38.7"	"1.6"	"38.6"	"34.7"	""	"1130"	"33"	"37.000"	"30.000"	"0.0270426002162291"	"15"	"0"	"2.045E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVLMDGVRPSSPEALVGK"	"[R].kVLMDGVRPSSPEALVGk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.38708"	"2570.52651"	"2570.53069"	"-1.63"	"-0.00104"	"5/186"	"5"	"186"	"4352879.99761963"	"HCD"	"MS2"	"26.627"	"166.1"	"100.000"	"44.9629"	"12840"	"12840"	"12811"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"380.3"	""	"255.3"	""	"219.3"	""	"217.4"	"4.5"	"254.1"	"236.4"	""	"361"	"12"	"32.000"	"25.000"	"1.05797938694782"	"13"	"0"	"8.251E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGPPPNPPPIDPASLEEFK"	"[R].lPGPPPnPPPIDPASLEEFk.[K]"	"N-Term(TMT6plex); N7(Deamidated); K20(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.81427"	"2571.42826"	"2571.41106"	"6.69"	"0.00573"	"9/190"	"9"	"190"	"303219.742004395"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"76.5441"	"25641"	"25641"	"25617"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.7"	""	"17.9"	""	"18.0"	""	"39.5"	""	"34.5"	"35.2"	""	"1121"	"19"	"37.000"	"30.000"	"0.750888783302236"	"14"	"0.0009404"	"0.009773"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIIGMDKPLSLPDFLAK"	"[R].nIIGmDkPLSLPDFLAk.[F]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"859.17651"	"2575.51499"	"2575.51364"	"0.52"	"0.00045"	"8/174"	"8"	"174"	"313096.459960938"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"72.7416"	"24095"	"24095"	"24065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"22.2"	""	"15.5"	""	"24.1"	""	"35.3"	""	"39.5"	"89.7"	""	"479"	"11"	"33.000"	"26.000"	"1.93778467853223"	"13"	"0.001846"	"0.02611"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDIKGDPIPNEQVLIK"	"[R].lVDIkGDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K5(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"860.19781"	"2578.57889"	"2578.57869"	"0.08"	"0.00007"	"8/170"	"8"	"170"	"496259.993225098"	"HCD"	"MS2"	"59.35601"	"31.6"	"100.000"	"64.0959"	"20626"	"20626"	"20595"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"97.1"	""	"49.9"	""	"49.3"	""	"37.9"	""	"31.1"	"32.5"	""	"135"	"16"	"28.000"	"21.000"	"0.156064373336853"	"15"	"0.0001889"	"0.0007069"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDIKGDPIPNEQVLIK"	"[R].lVDIkGDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K5(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"860.19812"	"2578.57981"	"2578.57869"	"0.43"	"0.00037"	"8/170"	"8"	"170"	"916204.993896484"	"HCD"	"MS2"	"0"	"56.8"	"100.000"	"64.0587"	"20557"	"20557"	"20537"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"204.3"	""	"109.0"	""	"80.6"	""	"54.8"	""	"41.2"	"42.7"	""	"132"	"18"	"28.000"	"21.000"	"0.100356136962345"	"14"	"0.0001859"	"0.000364"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILLSTTDPADFAVAESLEK"	"[K].tILLSTTDPADFAVAESLEk.[Y]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"3"	"3"	"0.2667"	"0.0000"	"1"	"1"	"1"	"860.47900"	"2579.42246"	"2579.42202"	"0.17"	"0.00015"	"7/188"	"7"	"188"	"117290.794372559"	"HCD"	"MS2"	"12.06195"	"5.0"	"100.000"	"81.1583"	"27518"	"27518"	"27488"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"4.3"	""	"7.4"	""	"7.3"	""	"11.2"	"11.0"	""	"1147"	"15"	"37.000"	"30.000"	"1.8515413788022"	"24"	"0.0004166"	"0.002442"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILLSTTDPADFAVAESLEK"	"[K].tILLSTTDPADFAVAESLEk.[Y]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"860.47949"	"2579.42392"	"2579.42202"	"0.74"	"0.00063"	"8/188"	"8"	"188"	"110617.909973145"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"81.1094"	"27549"	"27549"	"27518"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.2"	""	"8.1"	""	"4.0"	""	"11.2"	""	"12.4"	"14.4"	""	"1131"	"9"	"37.000"	"30.000"	"6.97320783190948"	"13"	"0.0005564"	"0.00338"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLIANDGTPLGVGFPVGIAVDPAR"	"[K].tLIANDGTPLGVGFPVGIAVDPAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"860.48462"	"2579.43930"	"2579.43945"	"-0.06"	"-0.00005"	"18/262"	"18"	"262"	"325393.503417969"	"HCD"	"MS2"	"16.07811"	"6.9"	"100.000"	"82.7514"	"28167"	"28167"	"28144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"9.6"	""	"13.9"	""	"7.5"	""	"11.4"	"14.5"	""	"1030"	"60"	"37.000"	"30.000"	"4.99812633131427E-05"	"17"	"0"	"5.553E-05"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPFQVEHVAQLLTGNPELK"	"[K].tPFQVEHVAQLLTGNPELk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"860.49207"	"2579.46164"	"2579.45974"	"0.74"	"0.00063"	"15/206"	"15"	"206"	"1335856.73492432"	"HCD"	"MS2"	"9.534782"	"41.9"	"100.000"	"69.9935"	"23024"	"23024"	"23002"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.7"	""	"47.9"	""	"51.6"	""	"74.0"	"0.3"	"88.0"	"80.4"	""	"818"	"37"	"36.000"	"29.000"	"0.00892736533943788"	"15"	"0"	"1.248E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPFQVEHVAQLLTGNPELK"	"[K].tPFQVEHVAQLLTGNPELk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"860.49219"	"2579.46201"	"2579.45974"	"0.88"	"0.00076"	"17/206"	"17"	"206"	"1356662.60217285"	"HCD"	"MS2"	"0"	"43.8"	"100.000"	"70.0780"	"23007"	"23007"	"22979"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"57.6"	""	"52.2"	""	"50.9"	""	"73.2"	"0.4"	"91.8"	"89.7"	""	"818"	"38"	"36.000"	"29.000"	"0.00652714571219824"	"15"	"0"	"1.484E-06"	"1.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLIANDGTPLGVGFPVGIAVDPAR"	"[K].tLIAnDGTPLGVGFPVGIAVDPAR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"860.81818"	"2580.43998"	"2580.42347"	"6.40"	"0.00550"	"8/262"	"8"	"262"	"307545.390930176"	"HCD"	"MS2"	"42.12105"	"5.2"	"100.000"	"82.7761"	"28228"	"28228"	"28205"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.9"	""	"6.5"	""	"8.7"	""	"12.2"	""	"7.8"	"8.8"	""	"1015"	"31"	"37.000"	"30.000"	"0.0371053084867834"	"18"	"0.0006037"	"0.005888"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.5278"	"0.0000"	"1"	"1"	"1"	"646.11542"	"2581.43984"	"2581.44303"	"-1.24"	"-0.00080"	"8/188"	"8"	"188"	"2141447.18353271"	"HCD"	"MS2"	"6.349301"	"35.0"	"100.000"	"79.0978"	"26677"	"26677"	"26657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.8"	""	"40.3"	""	"40.7"	""	"64.5"	""	"59.6"	"66.8"	""	"1034"	"36"	"37.000"	"30.000"	"0.0130764706416266"	""	"0"	"3E-06"	"1.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.8261"	"0.0000"	"1"	"1"	"1"	"646.11554"	"2581.44033"	"2581.44303"	"-1.05"	"-0.00068"	"9/188"	"9"	"188"	"2239458.18969727"	"HCD"	"MS2"	"8.192935"	"33.1"	"100.000"	"78.4704"	"26421"	"26421"	"26401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.1"	""	"44.8"	""	"39.4"	""	"82.0"	""	"48.0"	"45.9"	""	"1033"	"23"	"37.000"	"30.000"	"0.23992213965255"	"18"	"0"	"1.152E-05"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"861.15167"	"2581.44046"	"2581.44303"	"-0.99"	"-0.00086"	"14/188"	"14"	"188"	"774671.938232422"	"HCD"	"MS2"	"7.433372"	"23.1"	"100.000"	"79.6393"	"26949"	"26949"	"26927"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.9"	""	"30.4"	""	"28.7"	""	"45.9"	""	"42.7"	"38.2"	""	"1031"	"32"	"37.000"	"30.000"	"0.0353369180736347"	"16"	"0"	"3.012E-05"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"861.15192"	"2581.44120"	"2581.44303"	"-0.71"	"-0.00061"	"15/188"	"15"	"188"	"1058135.24609375"	"HCD"	"MS2"	"0.9186109"	"24.2"	"100.000"	"79.4092"	"26804"	"26804"	"26785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.6"	""	"32.9"	""	"32.5"	""	"53.0"	""	"36.6"	"33.3"	""	"1029"	"39"	"37.000"	"30.000"	"0.0072341145116484"	"15"	"0"	"3.068E-06"	"1.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"861.15192"	"2581.44120"	"2581.44303"	"-0.71"	"-0.00061"	"16/188"	"16"	"188"	"3476298.05395508"	"HCD"	"MS2"	"0"	"55.0"	"100.000"	"78.4610"	"26418"	"26418"	"26401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"109.8"	""	"72.8"	""	"63.0"	""	"121.2"	""	"73.6"	"81.0"	""	"1029"	"46"	"37.000"	"30.000"	"0.00141705066786749"	"16"	"0"	"1.619E-06"	"1.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7843"	"0.0000"	"1"	"1"	"1"	"861.15192"	"2581.44120"	"2581.44303"	"-0.71"	"-0.00061"	"16/188"	"16"	"188"	"26719075.1628418"	"HCD"	"MS2"	"0"	"93.7"	"23.046"	"78.6841"	"26560"	"26560"	"26543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"181.2"	""	"124.2"	""	"110.4"	""	"205.9"	""	"122.8"	"144.4"	""	"1029"	"51"	"37.000"	"30.000"	"0.000365077761617163"	"27"	"0"	"2.064E-06"	"1.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"861.15198"	"2581.44138"	"2581.44303"	"-0.64"	"-0.00055"	"15/188"	"15"	"188"	"4933412.38409424"	"HCD"	"MS2"	"0"	"75.7"	"100.000"	"78.9977"	"26688"	"26688"	"26671"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.2"	""	"104.9"	""	"88.2"	""	"165.9"	""	"105.0"	"112.2"	""	"1021"	"50"	"37.000"	"30.000"	"0.000549535491558031"	"19"	"0"	"2.581E-06"	"1.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"861.15210"	"2581.44175"	"2581.44303"	"-0.50"	"-0.00043"	"14/188"	"14"	"188"	"3643494.828125"	"HCD"	"MS2"	"0"	"57.2"	"100.000"	"79.0884"	"26674"	"26674"	"26657"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"111.4"	""	"81.3"	""	"70.1"	""	"120.1"	""	"77.9"	"81.7"	""	"1019"	"48"	"37.000"	"30.000"	"0.000800099848807946"	"26"	"0"	"6.09E-07"	"1.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"861.15234"	"2581.44248"	"2581.44303"	"-0.21"	"-0.00018"	"16/188"	"16"	"188"	"656078.859802246"	"HCD"	"MS2"	"3.005286"	"20.4"	"100.000"	"79.7299"	"26935"	"26935"	"26913"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"29.0"	""	"24.5"	""	"26.5"	""	"37.0"	""	"38.9"	"38.5"	""	"1014"	"20"	"37.000"	"30.000"	"0.479742240812457"	"14"	"0"	"5.241E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"861.15234"	"2581.44248"	"2581.44303"	"-0.21"	"-0.00018"	"17/188"	"17"	"188"	"1793082.19061279"	"HCD"	"MS2"	"4.593524"	"31.7"	"100.000"	"78.3840"	"26437"	"26437"	"26415"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.1"	""	"46.2"	""	"38.8"	""	"74.8"	""	"44.2"	"46.7"	""	"1014"	"48"	"37.000"	"30.000"	"0.000726119264931687"	"17"	"0"	"1.048E-06"	"1.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"861.15247"	"2581.44284"	"2581.44303"	"-0.07"	"-0.00006"	"15/188"	"15"	"188"	"1500696.41925049"	"HCD"	"MS2"	"0"	"28.2"	"100.000"	"79.3116"	"26816"	"26816"	"26799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.6"	""	"38.4"	""	"37.1"	""	"60.3"	"0.4"	"43.2"	"42.8"	""	"1014"	"47"	"37.000"	"30.000"	"0.000988571212077328"	"18"	"0"	"1.453E-06"	"1.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.5588"	"0.0000"	"1"	"1"	"1"	"646.11627"	"2581.44326"	"2581.44303"	"0.09"	"0.00006"	"13/188"	"13"	"188"	"6121480.58154297"	"HCD"	"MS2"	"0"	"65.8"	"100.000"	"78.8453"	"26625"	"26625"	"26607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.8"	""	"93.3"	""	"76.5"	""	"134.7"	""	"95.9"	"101.8"	""	"1005"	"34"	"37.000"	"30.000"	"0.0199588753608394"	"30"	"0"	"3.249E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.5625"	"0.0000"	"1"	"1"	"1"	"646.11627"	"2581.44326"	"2581.44303"	"0.09"	"0.00006"	"24/188"	"24"	"188"	"7259498.1864624"	"HCD"	"MS2"	"0"	"80.2"	"100.000"	"78.5273"	"26496"	"26496"	"26479"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"161.1"	""	"97.2"	""	"102.4"	""	"177.4"	"1.8"	"111.0"	"105.3"	""	"1005"	"32"	"37.000"	"30.000"	"0.0311269140226083"	"29"	"0"	"2.804E-06"	"1.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.5625"	"0.0000"	"1"	"1"	"1"	"646.11646"	"2581.44399"	"2581.44303"	"0.37"	"0.00024"	"14/188"	"14"	"188"	"10007615.8914795"	"HCD"	"MS2"	"0.1324204"	"114.5"	"100.000"	"78.7792"	"26547"	"26547"	"26529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"228.0"	""	"147.2"	""	"128.2"	""	"240.4"	""	"177.6"	"165.4"	""	"993"	"32"	"36.000"	"29.000"	"0.029438742365397"	"29"	"0"	"7.796E-06"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"861.15332"	"2581.44541"	"2581.44303"	"0.92"	"0.00079"	"16/188"	"16"	"188"	"21272036.5568848"	"HCD"	"MS2"	"0"	"123.2"	"38.502"	"78.7748"	"26546"	"26546"	"26529"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"240.2"	""	"163.1"	""	"143.0"	""	"263.9"	""	"176.9"	"177.8"	""	"977"	"48"	"36.000"	"29.000"	"0.000706097328009386"	"18"	"0"	"3.242E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGETIFVTAPHEATAGIIGVNR"	"[R].iSGETIFVTAPHEATAGIIGVNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"861.47650"	"2582.41495"	"2582.41397"	"0.38"	"0.00033"	"19/204"	"19"	"204"	"2071003.90161133"	"HCD"	"MS2"	"48.43947"	"31.8"	"100.000"	"59.6967"	"18829"	"18829"	"18805"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.5"	""	"44.5"	""	"44.1"	""	"44.4"	"0.5"	"64.3"	"60.2"	""	"1217"	"84"	"37.000"	"30.000"	"2.33485858882052E-07"	"23"	"0"	"2.881E-08"	"1.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGETIFVTAPHEATAGIIGVNR"	"[R].iSGETIFVTAPHEATAGIIGVNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9438"	"0.0000"	"1"	"1"	"1"	"861.47656"	"2582.41513"	"2582.41397"	"0.45"	"0.00039"	"19/204"	"19"	"204"	"2045937.46917725"	"HCD"	"MS2"	"6.130866"	"30.7"	"100.000"	"59.5654"	"18722"	"18722"	"18697"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.2"	""	"40.4"	""	"47.9"	""	"52.1"	"1.1"	"51.8"	"64.1"	""	"1219"	"89"	"37.000"	"30.000"	"8.14654967335058E-08"	"23"	"0"	"8.635E-09"	"2.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); N1(Deamidated); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"861.47943"	"2582.42374"	"2582.42705"	"-1.28"	"-0.00110"	"12/188"	"12"	"188"	"310258.666137695"	"HCD"	"MS2"	"3.71803"	"7.8"	"100.000"	"86.2964"	"29604"	"29604"	"29585"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.2"	""	"10.6"	""	"10.3"	""	"15.6"	""	"12.5"	"8.3"	""	"1151"	"31"	"37.000"	"30.000"	"0.0447760035123408"	"16"	"0"	"1.566E-05"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); N1(Deamidated); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"861.47955"	"2582.42411"	"2582.42705"	"-1.14"	"-0.00098"	"15/188"	"15"	"188"	"239794.661560059"	"HCD"	"MS2"	"9.207194"	"6.6"	"100.000"	"86.3482"	"29678"	"29678"	"29654"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.7"	""	"12.4"	""	"6.5"	""	"11.3"	""	"11.6"	"11.0"	""	"1151"	"28"	"37.000"	"30.000"	"0.0916316122417949"	"17"	"0"	"0.0001203"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); N1(Deamidated); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"861.48090"	"2582.42813"	"2582.42705"	"0.42"	"0.00036"	"16/188"	"16"	"188"	"242640.177124023"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"82.5295"	"28077"	"28077"	"28048"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.5"	""	"13.5"	""	"10.9"	""	"8.6"	""	"6.8"	"6.2"	""	"1131"	"28"	"37.000"	"30.000"	"0.0980466160729966"	"16"	"0"	"3.837E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLHPLNELFPLAYIEDPK"	"[K].nLHPLNELFPLAYIEDPk.[M]"	"N-Term(TMT6plex); N1(Deamidated); K18(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"861.48108"	"2582.42868"	"2582.42705"	"0.63"	"0.00055"	"13/188"	"13"	"188"	"288655.709655762"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"82.6768"	"28188"	"28188"	"28157"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.4"	""	"11.0"	""	"11.8"	""	"9.8"	""	"9.3"	"8.9"	""	"1127"	"14"	"37.000"	"30.000"	"2.04594483862952"	"15"	"0.0001308"	"0.0003076"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLKQEDFQLLCPDGTK"	"[K].dLkQEDFQLLcPDGTk.[K]"	"N-Term(TMT6plex); K3(TMT6plex); C11(Methylthio); K16(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"861.79572"	"2583.37259"	"2583.37656"	"-1.53"	"-0.00132"	"13/174"	"13"	"174"	"507879.725769043"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"64.5677"	"20765"	"20765"	"20745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"86.3"	""	"38.4"	""	"45.9"	""	"30.8"	"0.8"	"41.6"	"53.8"	""	"1425"	"28"	"38.000"	"31.000"	"0.105144090495907"	"18"	"0"	"0.0001098"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLKQEDFQLLCPDGTK"	"[K].dLkQEDFQLLcPDGTk.[K]"	"N-Term(TMT6plex); K3(TMT6plex); C11(Methylthio); K16(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"4"	"4"	"0.5000"	"0.0000"	"1"	"1"	"1"	"646.59894"	"2583.37392"	"2583.37656"	"-1.02"	"-0.00066"	"10/174"	"10"	"174"	"4843583.72625732"	"HCD"	"MS2"	"26.13066"	"117.9"	"100.000"	"64.3010"	"20709"	"20709"	"20691"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"272.1"	""	"151.1"	""	"158.7"	""	"166.7"	"1.8"	"164.9"	"196.6"	""	"1416"	"18"	"38.000"	"31.000"	"1.01398903268567"	"22"	"0"	"7.812E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLKQEDFQLLCPDGTK"	"[K].dLkQEDFQLLcPDGTk.[K]"	"N-Term(TMT6plex); K3(TMT6plex); C11(Methylthio); K16(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"861.79633"	"2583.37442"	"2583.37656"	"-0.83"	"-0.00071"	"15/174"	"15"	"174"	"364749.645263672"	"HCD"	"MS2"	"5.827446"	"21.8"	"100.000"	"64.5615"	"20816"	"20816"	"20787"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.5"	""	"27.2"	""	"30.9"	""	"27.2"	""	"27.6"	"32.0"	""	"1421"	"25"	"38.000"	"31.000"	"0.207761026445769"	"16"	"0"	"5.814E-05"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLKQEDFQLLCPDGTK"	"[K].dLkQEDFQLLcPDGTk.[K]"	"N-Term(TMT6plex); K3(TMT6plex); C11(Methylthio); K16(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"861.79718"	"2583.37699"	"2583.37656"	"0.17"	"0.00014"	"17/174"	"17"	"174"	"1968993.86437988"	"HCD"	"MS2"	"8.957344"	"84.8"	"100.000"	"64.1906"	"20664"	"20664"	"20643"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"270.9"	""	"119.0"	""	"110.6"	""	"83.2"	"3.3"	"95.8"	"114.5"	""	"1418"	"33"	"38.000"	"31.000"	"0.036445694897194"	"19"	"0"	"3.445E-06"	"1.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLKQEDFQLLCPDGTK"	"[K].dLkQEDFQLLcPDGTk.[K]"	"N-Term(TMT6plex); K3(TMT6plex); C11(Methylthio); K16(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"861.79767"	"2583.37845"	"2583.37656"	"0.73"	"0.00063"	"16/174"	"16"	"174"	"2431221.43688965"	"HCD"	"MS2"	"20.56784"	"97.8"	"100.000"	"64.2267"	"20626"	"20626"	"20601"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"274.4"	""	"156.8"	""	"134.5"	""	"105.7"	""	"111.0"	"138.4"	""	"1403"	"16"	"38.000"	"31.000"	"1.60704365841659"	"14"	"0"	"2.295E-05"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPVGYNLMKPFLSEDTR"	"[K].lFPVGYNLMkPFLSEDTR.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"862.47784"	"2585.41898"	"2585.42019"	"-0.47"	"-0.00040"	"5/164"	"5"	"164"	"248955.908081055"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"83.1345"	"28323"	"28323"	"28303"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"44.7"	""	"40.3"	""	"33.0"	""	"23.0"	""	"15.7"	"16.7"	""	"1190"	"9"	"37.000"	"30.000"	"7.66508483257415"	"13"	"0.00103"	"0.01211"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPVGYNLMKPFLSEDTR"	"[K].lFPVGYNLMkPFLSEDTR.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"862.47815"	"2585.41989"	"2585.42019"	"-0.11"	"-0.00010"	"6/164"	"6"	"164"	"294855.614868164"	"HCD"	"MS2"	"2.404417"	"16.7"	"100.000"	"83.0440"	"28337"	"28337"	"28317"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"37.7"	""	"31.4"	""	"34.5"	""	"21.1"	""	"15.3"	"17.2"	""	"1186"	"14"	"37.000"	"30.000"	"2.15801616423434"	"14"	"0.0001859"	"0.0003271"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APVSALPLAPNNLGGGPIVLGGESR"	"[R].aPVSALPLAPNNLGGGPIVLGGESR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08851"	"Syntaxin-5 OS=Rattus norvegicus OX=10116 GN=Stx5 PE=1 SV=2"	"Q08851"	"Syntaxin-5 OS=Rattus norvegicus OX=10116 GN=Stx5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"862.49268"	"2585.46347"	"2585.46125"	"0.86"	"0.00074"	"16/260"	"16"	"260"	"261347.074645996"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"72.2559"	"23948"	"23948"	"23919"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.5"	""	"13.9"	""	"19.0"	""	"15.2"	""	"22.8"	"25.0"	""	"873"	"47"	"36.000"	"29.000"	"0.00097720177698508"	"15"	"0"	"8.024E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEQLGPVTQEFWANLEK"	"[R].lQEQLGPVTQEFWANLEk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"863.47540"	"2588.41166"	"2588.41246"	"-0.31"	"-0.00027"	"11/196"	"11"	"196"	"145856.900390625"	"HCD"	"MS2"	"36.29681"	"6.6"	"100.000"	"85.2986"	"29206"	"29206"	"29179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.9"	""	"7.2"	""	"7.8"	""	"10.3"	""	"14.5"	"14.1"	""	"1273"	"28"	"38.000"	"31.000"	"0.10064643769956"	"19"	"0"	"0.000151"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEQLGPVTQEFWANLEK"	"[R].lQEQLGPVTQEFWANLEk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"863.47675"	"2588.41568"	"2588.41246"	"1.25"	"0.00107"	"9/196"	"9"	"196"	"99202.9857788086"	"HCD"	"MS2"	"21.25398"	"4.3"	"100.000"	"85.4246"	"29308"	"29308"	"29282"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.7"	""	"4.3"	""	"6.1"	""	"7.5"	""	"5.8"	"10.8"	""	"1268"	"29"	"38.000"	"31.000"	"0.0831934735978175"	"19"	"0.0003839"	"0.001646"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDSSLKPVSVSYNPATAK"	"[K].hDSSLkPVSVSYNPATAk.[E]"	"N-Term(TMT6plex); K6(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.49170"	"2588.46054"	"2588.46511"	"-1.76"	"-0.00152"	"12/188"	"12"	"188"	"242237.891357422"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"35.9415"	"9112"	"9112"	"9083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.9"	""	"19.6"	""	"23.1"	""	"37.1"	""	"35.6"	"30.0"	""	"958"	"17"	"36.000"	"29.000"	"0.984771595476404"	"14"	"0.0001889"	"0.0004415"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDSSLKPVSVSYNPATAK"	"[K].hDSSLkPVSVSYNPATAk.[E]"	"N-Term(TMT6plex); K6(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.87091"	"2588.46181"	"2588.46511"	"-1.27"	"-0.00082"	"11/188"	"11"	"188"	"15815234.5369873"	"HCD"	"MS2"	"3.646592"	"231.3"	"56.647"	"35.9213"	"9103"	"9103"	"9083"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"394.1"	""	"222.4"	""	"257.2"	""	"440.0"	""	"454.0"	"424.9"	""	"948"	"11"	"36.000"	"29.000"	"3.43382645075545"	"13"	"0"	"4.47E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDSSLKPVSVSYNPATAK"	"[K].hDSSLkPVSVSYNPATAk.[E]"	"N-Term(TMT6plex); K6(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.87097"	"2588.46206"	"2588.46511"	"-1.18"	"-0.00076"	"11/188"	"11"	"188"	"15232589.7778931"	"HCD"	"MS2"	"0"	"303.1"	"84.980"	"35.9804"	"9171"	"9171"	"9145"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"583.5"	""	"288.7"	""	"346.3"	""	"571.4"	"1.9"	"558.3"	"519.0"	""	"952"	"21"	"36.000"	"29.000"	"0.350434578407495"	"14"	"0"	"1.667E-05"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPEEEAPSTVLSQNLFTPK"	"[K].fPEEEAPSTVLSQNLFTPk.[Q]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"864.80267"	"2592.39347"	"2592.39614"	"-1.03"	"-0.00089"	"16/184"	"16"	"184"	"1104714.84265137"	"HCD"	"MS2"	"11.18152"	"31.1"	"100.000"	"73.9207"	"24627"	"24627"	"24607"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.0"	""	"34.7"	""	"50.3"	""	"50.1"	"0.3"	"59.9"	"58.1"	""	"1391"	"29"	"38.000"	"31.000"	"0.0966712055008887"	"15"	"0"	"0.00014"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPEEEAPSTVLSQNLFTPK"	"[K].fPEEEAPSTVLSQNLFTPk.[Q]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"864.80334"	"2592.39548"	"2592.39614"	"-0.25"	"-0.00022"	"17/184"	"17"	"184"	"1130236.28594971"	"HCD"	"MS2"	"13.56138"	"32.8"	"100.000"	"73.9458"	"24586"	"24586"	"24561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.8"	""	"37.2"	""	"50.8"	""	"55.5"	""	"62.6"	"62.4"	""	"1394"	"32"	"38.000"	"31.000"	"0.0475590069816744"	"15"	"0"	"0.0001037"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGLLPLTFADPSDYNK"	"[K].kQGLLPLTFADPSDYNk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"865.49677"	"2594.47574"	"2594.47970"	"-1.53"	"-0.00132"	"16/172"	"16"	"172"	"599454.609375"	"HCD"	"MS2"	"14.59262"	"35.2"	"100.000"	"61.6507"	"19574"	"19574"	"19545"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.6"	""	"48.1"	""	"54.2"	""	"36.2"	""	"53.5"	"48.0"	""	"762"	"25"	"35.000"	"28.000"	"0.116124799104826"	"14"	"0"	"7.418E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQGLLPLTFADPSDYNK"	"[K].kQGLLPLTFADPSDYNk.[I]"	"N-Term(TMT6plex); K1(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"865.49896"	"2594.48233"	"2594.47970"	"1.02"	"0.00088"	"9/172"	"9"	"172"	"367061.61114502"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"61.8189"	"19696"	"19696"	"19667"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"46.0"	""	"33.6"	""	"35.7"	""	"35.1"	""	"44.1"	"39.1"	""	"705"	"10"	"35.000"	"28.000"	"3.64048395530893"	"13"	"0.0003839"	"0.001699"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDQEFLADPLVPPQLTIK"	"[K].lVDQEFLADPLVPPQLTIk.[D]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"865.51074"	"2594.51767"	"2594.52095"	"-1.26"	"-0.00109"	"8/202"	"8"	"202"	"110563.217041016"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"89.8449"	"31012"	"31012"	"31001"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	"4.7"	""	""	""	"4.5"	""	"6.3"	"5.7"	""	"463"	"16"	"33.000"	"26.000"	"0.520656141250984"	"14"	"0.0001889"	"0.0004971"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDQEFLADPLVPPQLTIK"	"[K].lVDQEFLADPLVPPQLTIk.[D]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"865.51117"	"2594.51896"	"2594.52095"	"-0.77"	"-0.00066"	"11/202"	"11"	"202"	"79924.8453369141"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"90.1292"	"31119"	"31119"	"31110"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"2.6"	""	"4.8"	""	"5.4"	""	""	"4.2"	""	"449"	"30"	"33.000"	"26.000"	"0.0227099587481347"	"14"	"0.0001308"	"0.0002473"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDQEFLADPLVPPQLTIK"	"[K].lVDQEFLADPLVPPQLTIk.[D]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"865.51172"	"2594.52060"	"2594.52095"	"-0.13"	"-0.00011"	"15/202"	"15"	"202"	"181456.89251709"	"HCD"	"MS2"	"3.901438"	"4.4"	"100.000"	"89.7579"	"30944"	"30944"	"30925"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.3"	""	"8.0"	""	"5.0"	""	"6.2"	""	"6.0"	"11.3"	""	"442"	"44"	"33.000"	"26.000"	"0.000822985670822597"	"15"	"0"	"7.894E-06"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDQEFLADPLVPPQLTIK"	"[K].lVDQEFLADPLVPPQLTIk.[D]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"865.51190"	"2594.52115"	"2594.52095"	"0.08"	"0.00007"	"5/202"	"5"	"202"	"67574.4833374023"	"HCD"	"MS2"	"0"	"2.4"	"100.000"	"90.0279"	"31048"	"31048"	"31039"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.1"	""	"2.4"	""	"3.3"	""	"6.4"	""	"3.4"	"3.9"	""	"438"	"9"	"33.000"	"26.000"	"2.78897174742649"	"13"	"0.0006737"	"0.006561"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMAGDEWLFEGPGTYIPQK"	"[K].vMAGDEWLFEGPGTYIPQk.[E]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"866.12354"	"2596.35605"	"2596.35217"	"1.50"	"0.00130"	"10/164"	"10"	"164"	"214171.554382324"	"HCD"	"MS2"	"35.12782"	"10.2"	"100.000"	"80.4656"	"27286"	"27286"	"27263"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.2"	""	"17.8"	""	"19.2"	""	"12.9"	""	"15.2"	"18.4"	""	"1540"	"28"	"38.000"	"31.000"	"0.118710934877116"	"18"	"0.0001889"	"0.0005887"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDGSLMFQQVPMVEIDGMK"	"[R].nDGSLMFQQVPMVEIDGMk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"866.44305"	"2597.31461"	"2597.31777"	"-1.22"	"-0.00105"	"17/208"	"17"	"208"	"456962.290893555"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"77.8092"	"26152"	"26152"	"26121"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.6"	""	"19.2"	""	"19.2"	""	"18.5"	""	"25.0"	"33.9"	""	"1448"	"70"	"38.000"	"31.000"	"6.75676113777023E-06"	"25"	"0"	"1.394E-05"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDGSLMFQQVPMVEIDGMK"	"[R].nDGSLMFQQVPMVEIDGMk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"0.9531"	"0.0000"	"1"	"1"	"1"	"866.44330"	"2597.31534"	"2597.31777"	"-0.94"	"-0.00081"	"15/208"	"15"	"208"	"495010.972351074"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"77.7670"	"26185"	"26185"	"26165"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"32.2"	""	"17.9"	""	"19.9"	""	"22.2"	""	"29.8"	"32.3"	""	"1454"	"64"	"38.000"	"31.000"	"2.68865086700254E-05"	"19"	"0"	"2.187E-06"	"1.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDGSLMFQQVPMVEIDGMK"	"[R].nDGSLMFQqVPMVEIDGMk.[L]"	"N-Term(TMT6plex); Q9(Deamidated); K19(TMT6plex)"	"1"	"1"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"866.77637"	"2598.31455"	"2598.30179"	"4.91"	"0.00425"	"16/208"	"16"	"208"	"475905.941711426"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"77.7483"	"26178"	"26178"	"26149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.0"	""	"19.5"	""	"20.7"	""	"23.8"	""	"26.6"	"27.8"	""	"1385"	"49"	"38.000"	"31.000"	"0.000938468668053093"	"17"	"0"	"1.682E-05"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDGSLMFQQVPMVEIDGMK"	"[R].nDGSLMFqQVPMVEIDGMk.[L]"	"N-Term(TMT6plex); Q8(Deamidated); K19(TMT6plex)"	"1"	"1"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"2"	"2"	"866.77637"	"2598.31455"	"2598.30179"	"4.91"	"0.00425"	"16/208"	"16"	"208"	"475905.941711426"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"77.7483"	"26178"	"26178"	"26149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.0"	""	"19.5"	""	"20.7"	""	"23.8"	""	"26.6"	"27.8"	""	"1385"	"49"	"38.000"	"31.000"	"0.000955916103237498"	"17"	"0"	"1.783E-05"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDSLQLTASNPVATPVDWK"	"[R].vVDSLQLTASNPVATPVDWk.[K]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.9306"	"0.0000"	"1"	"1"	"1"	"866.82135"	"2598.44950"	"2598.45432"	"-1.86"	"-0.00161"	"18/210"	"18"	"210"	"2592727.73925781"	"HCD"	"MS2"	"5.073578"	"56.4"	"100.000"	"73.2238"	"24343"	"24343"	"24319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.0"	""	"72.4"	""	"79.4"	""	"99.0"	""	"101.1"	"110.8"	""	"998"	"72"	"36.000"	"29.000"	"3.13401121047846E-06"	"22"	"0"	"2.757E-07"	"1.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDSLQLTASNPVATPVDWK"	"[R].vVDSLQLTASNPVATPVDWk.[K]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"4"	"4"	"0.9383"	"0.0000"	"1"	"1"	"1"	"650.36884"	"2598.45351"	"2598.45432"	"-0.31"	"-0.00020"	"19/210"	"19"	"210"	"2885686.97674561"	"HCD"	"MS2"	"10.66917"	"51.0"	"100.000"	"73.4084"	"24418"	"24418"	"24399"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"74.7"	""	"59.2"	""	"59.2"	""	"93.8"	"1.2"	"91.5"	"104.3"	""	"961"	"81"	"36.000"	"29.000"	"3.87876432034566E-07"	"23"	"0"	"2.87E-07"	"1.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDSLQLTASNPVATPVDWK"	"[R].vVDSLQLTASNPVATPVDWk.[K]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.9405"	"0.0000"	"1"	"1"	"1"	"866.82281"	"2598.45389"	"2598.45432"	"-0.17"	"-0.00014"	"17/210"	"17"	"210"	"3166083.00579834"	"HCD"	"MS2"	"0"	"67.3"	"100.000"	"73.2722"	"24311"	"24311"	"24289"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"104.2"	""	"82.1"	""	"92.8"	""	"114.7"	"0.4"	"123.4"	"119.7"	""	"957"	"84"	"36.000"	"29.000"	"2.09354327318224E-07"	"23"	"0"	"2.671E-07"	"1.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDSLQLTASNPVATPVDWK"	"[R].vVDSLQLTASNPVATPVDWk.[K]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"866.82288"	"2598.45407"	"2598.45432"	"-0.10"	"-0.00008"	"19/210"	"19"	"210"	"2959749.54241943"	"HCD"	"MS2"	"0"	"63.5"	"100.000"	"73.5722"	"24434"	"24434"	"24417"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"83.6"	""	"77.9"	""	"74.5"	""	"114.7"	"0.6"	"119.6"	"131.2"	""	"958"	"72"	"36.000"	"29.000"	"2.80114450305207E-06"	"21"	"0"	"4.167E-07"	"1.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGLGELILPENEPGSSIMPGK"	"[R].sGLGELILPEnEPGSSImPGk.[V]"	"N-Term(TMT6plex); N11(Deamidated); M18(Oxidation); K21(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.48248"	"2600.43290"	"2600.38934"	"16.75"	"0.01452"	"13/210"	"13"	"210"	"858523.183654785"	"HCD"	"MS2"	"23.11797"	"41.2"	"100.000"	"71.2687"	"23545"	"23545"	"23514"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.0"	""	"53.5"	""	"54.5"	""	"53.0"	"0.1"	"78.4"	"87.1"	""	"1094"	"12"	"37.000"	"30.000"	"3.68966831150764"	"13"	"0.0008453"	"0.008246"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGLGELILPENEPGSSIMPGK"	"[R].sGLGELILPEnEPGSSImPGk.[V]"	"N-Term(TMT6plex); N11(Deamidated); M18(Oxidation); K21(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"867.48297"	"2600.43436"	"2600.38934"	"17.31"	"0.01501"	"8/210"	"8"	"210"	"833082.75012207"	"HCD"	"MS2"	"20.31027"	"32.1"	"100.000"	"71.2934"	"23503"	"23503"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.7"	""	"44.8"	""	"40.5"	""	"39.8"	"0.5"	"62.1"	"61.1"	""	"1092"	"21"	"37.000"	"30.000"	"0.47554612011602"	"17"	"0.004346"	"0.1154"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPVGYNLMKPFLSEDTR"	"[K].lFPVGYNLmkPFLSEDTR.[R]"	"N-Term(TMT6plex); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.80859"	"2601.41123"	"2601.41510"	"-1.49"	"-0.00129"	"15/164"	"15"	"164"	"625964.613586426"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"69.6101"	"22868"	"22868"	"22842"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"67.9"	""	"45.1"	""	"53.6"	""	"82.9"	"0.3"	"51.1"	"57.8"	""	"1310"	"21"	"38.000"	"31.000"	"0.470155260782742"	"14"	"0.0001308"	"0.000215"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPVGYNLMKPFLSEDTR"	"[K].lFPVGYnLmkPFLSEDTR.[R]"	"N-Term(TMT6plex); N7(Deamidated); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"868.14215"	"2602.41190"	"2602.39912"	"4.91"	"0.00426"	"8/164"	"8"	"164"	"797005.58996582"	"HCD"	"MS2"	"40.39244"	"48.7"	"100.000"	"69.7295"	"22865"	"22865"	"22842"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"87.1"	""	"73.1"	""	"65.9"	""	"105.6"	""	"57.6"	"70.3"	""	"1297"	"26"	"38.000"	"31.000"	"0.181932371421169"	"17"	"0.0001889"	"0.0009582"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKLPDGSEIPLPPILLGK"	"[K].qkLPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.20905"	"2602.61258"	"2602.61507"	"-0.96"	"-0.00083"	"16/176"	"16"	"176"	"991015.274353027"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"75.7358"	"25368"	"25368"	"25343"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.3"	""	"37.7"	""	"34.9"	""	"52.1"	""	"56.5"	"50.4"	""	"106"	"36"	"27.000"	"20.000"	"0.0014664790720681"	"15"	"0"	"1.311E-05"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKLPDGSEIPLPPILLGK"	"[K].qkLPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.20935"	"2602.61350"	"2602.61507"	"-0.60"	"-0.00052"	"9/176"	"9"	"176"	"1242991.61364746"	"HCD"	"MS2"	"7.720402"	"32.5"	"100.000"	"76.0434"	"25489"	"25489"	"25471"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.9"	""	"41.8"	""	"39.9"	""	"54.2"	""	"64.0"	"60.7"	""	"103"	"28"	"27.000"	"20.000"	"0.00729133796677897"	"14"	"0"	"5.926E-05"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKLPDGSEIPLPPILLGK"	"[K].qkLPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"1"	"4"	"4"	"0.9231"	"0.0000"	"1"	"1"	"1"	"651.40887"	"2602.61367"	"2602.61507"	"-0.54"	"-0.00035"	"16/176"	"16"	"176"	"2429593.84442139"	"HCD"	"MS2"	"9.409416"	"44.6"	"100.000"	"75.9995"	"25472"	"25472"	"25455"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"60.4"	""	"57.2"	""	"52.7"	""	"84.2"	"2.3"	"83.7"	"82.3"	""	"102"	"26"	"27.000"	"20.000"	"0.0131695269722364"	"16"	"0"	"3.826E-05"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKLPDGSEIPLPPILLGK"	"[K].qkLPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.20978"	"2602.61478"	"2602.61507"	"-0.11"	"-0.00010"	"15/176"	"15"	"176"	"1251683.49163818"	"HCD"	"MS2"	"5.708915"	"37.8"	"100.000"	"76.0830"	"25458"	"25458"	"25441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.8"	""	"41.0"	""	"51.6"	""	"61.5"	"1.1"	"77.6"	"71.3"	""	"102"	"26"	"27.000"	"20.000"	"0.0135696978049739"	"14"	"0"	"8.846E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKLPDGSEIPLPPILLGK"	"[K].qkLPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"1"	"4"	"4"	"0.9130"	"0.0000"	"1"	"1"	"1"	"651.40918"	"2602.61489"	"2602.61507"	"-0.07"	"-0.00005"	"16/176"	"16"	"176"	"2818223.32409668"	"HCD"	"MS2"	"25.32278"	"51.2"	"100.000"	"75.9748"	"25413"	"25413"	"25393"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"74.6"	""	"62.7"	""	"68.6"	""	"99.3"	"2.9"	"93.9"	"82.8"	""	"102"	"23"	"27.000"	"20.000"	"0.0283511171207906"	"16"	"0"	"4.441E-05"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKLPDGSEIPLPPILLGK"	"[K].qkLPDGSEIPLPPILLGk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.21057"	"2602.61716"	"2602.61507"	"0.80"	"0.00070"	"14/176"	"14"	"176"	"712673.234924316"	"HCD"	"MS2"	"11.58246"	"23.0"	"100.000"	"75.7482"	"25321"	"25321"	"25297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.2"	""	"27.6"	"2.1"	"32.1"	""	"45.3"	""	"40.6"	"33.8"	""	"96"	"28"	"26.000"	"19.000"	"0.008189195467215"	"14"	"0"	"7.019E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMLQGVDLLADAVAVTMGPK"	"[R].aLmLQGVDLLADAVAVTmGPk.[G]"	"N-Term(TMT6plex); M3(Oxidation); M18(Oxidation); K21(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.48932"	"2603.45340"	"2603.45525"	"-0.71"	"-0.00062"	"5/210"	"5"	"210"	"79450.6652832031"	"HCD"	"MS2"	"0"	"1.3"	"100.000"	"92.3701"	"31866"	"31866"	"31859"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	"6.4"	""	"3.6"	"2.1"	""	"1071"	"14"	"37.000"	"30.000"	"2.12206887343788"	"13"	"0.0005564"	"0.003515"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMLQGVDLLADAVAVTMGPK"	"[R].aLmLQGVDLLADAVAVTmGPk.[G]"	"N-Term(TMT6plex); M3(Oxidation); M18(Oxidation); K21(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.49005"	"2603.45560"	"2603.45525"	"0.13"	"0.00012"	"7/210"	"7"	"210"	"93598.7423095703"	"HCD"	"MS2"	"0"	"0.5"	"100.000"	"92.5399"	"31947"	"31947"	"31940"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	"5.0"	""	""	""	""	"1047"	"6"	"37.000"	"30.000"	"12.6158549191743"	"13"	"0.0004166"	"0.002323"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMLQGVDLLADAVAVTMGPK"	"[R].aLmLQGVDLLADAVAVTmGPk.[G]"	"N-Term(TMT6plex); M3(Oxidation); M18(Oxidation); K21(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"868.49060"	"2603.45725"	"2603.45525"	"0.77"	"0.00067"	"9/210"	"9"	"210"	"87191.9057006836"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"92.8075"	"32031"	"32031"	"32022"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	"7.0"	""	"4.6"	"4.2"	""	"1034"	"19"	"37.000"	"30.000"	"0.659918864155465"	"15"	"0.0001859"	"0.0003252"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMLQGVDLLADAVAVTMGPK"	"[R].aLmLQGVDLLADAVAVTmGPk.[G]"	"N-Term(TMT6plex); M3(Oxidation); M18(Oxidation); K21(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"868.49072"	"2603.45761"	"2603.45525"	"0.91"	"0.00079"	"7/210"	"7"	"210"	"77522.993347168"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"92.6358"	"31949"	"31949"	"31942"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.9"	""	"1.8"	""	"2.0"	""	"6.7"	""	"2.3"	"4.4"	""	"1035"	"7"	"37.000"	"30.000"	"9.74788403810972"	"14"	"0.0001859"	"0.0003512"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGKDFDALLINPR"	"[R].eIGNFEVGkDFDALLINPR.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.15088"	"2605.43808"	"2605.43901"	"-0.35"	"-0.00031"	"20/196"	"20"	"196"	"3736685.88348389"	"HCD"	"MS2"	"14.47927"	"212.9"	"100.000"	"73.7545"	"24560"	"24560"	"24543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"507.0"	""	"467.9"	""	"393.1"	""	"209.5"	""	"211.6"	"210.1"	""	"1158"	"27"	"37.000"	"30.000"	"0.110835418058721"	"14"	"0"	"2.399E-06"	"1.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGKDFDALLINPR"	"[R].eIGNFEVGkDFDALLINPR.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.15131"	"2605.43937"	"2605.43901"	"0.14"	"0.00012"	"20/196"	"20"	"196"	"3748974.82983398"	"HCD"	"MS2"	"10.68032"	"220.2"	"100.000"	"73.7728"	"24515"	"24515"	"24497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"532.0"	""	"468.6"	""	"410.3"	""	"222.3"	""	"206.7"	"227.7"	""	"1158"	"31"	"37.000"	"30.000"	"0.0418483716285656"	"14"	"0"	"3.856E-06"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQMPDQGMTSADDFFQGTK"	"[R].fQMPDQGMTSADDFFQGTk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9718"	"0.0000"	"1"	"1"	"1"	"870.41748"	"2609.23789"	"2609.24163"	"-1.43"	"-0.00125"	"17/204"	"17"	"204"	"736909.363220215"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"71.8230"	"23719"	"23719"	"23699"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"50.6"	""	"51.6"	""	"51.2"	""	"43.5"	""	"54.4"	"51.4"	""	"817"	"71"	"36.000"	"29.000"	"3.18560600148751E-06"	"19"	"0"	"0.0001049"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQMPDQGMTSADDFFQGTK"	"[R].fQMPDQGMTSADDFFQGTk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"870.41754"	"2609.23807"	"2609.24163"	"-1.36"	"-0.00119"	"14/204"	"14"	"204"	"623978.652526855"	"HCD"	"MS2"	"4.883859"	"26.7"	"100.000"	"71.7524"	"23742"	"23742"	"23722"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.7"	""	"35.7"	""	"44.3"	""	"35.6"	""	"48.7"	"44.9"	""	"815"	"46"	"36.000"	"29.000"	"0.00101187674040795"	"18"	"0.0001308"	"0.0002883"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQMPDQGMTSADDFFQGTK"	"[R].fQMPDQGMTSADDFFQGTk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9833"	"0.0000"	"1"	"1"	"1"	"870.41840"	"2609.24063"	"2609.24163"	"-0.38"	"-0.00033"	"16/204"	"16"	"204"	"1457748.73016357"	"HCD"	"MS2"	"22.10547"	"52.1"	"100.000"	"71.4344"	"23612"	"23612"	"23594"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"111.4"	""	"65.0"	""	"81.8"	""	"59.0"	"0.0"	"87.0"	"88.2"	""	"821"	"60"	"36.000"	"29.000"	"3.70948108963005E-05"	"17"	"0"	"7.956E-06"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQMPDQGMTSADDFFQGTK"	"[R].fQMPDQGMTSADDFFQGTk.[A]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"870.41870"	"2609.24155"	"2609.24163"	"-0.03"	"-0.00003"	"8/204"	"8"	"204"	"1142948.59631348"	"HCD"	"MS2"	"29.34008"	"48.3"	"100.000"	"71.5075"	"23590"	"23590"	"23571"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.5"	""	"66.3"	""	"65.7"	""	"75.0"	""	"84.2"	"83.4"	""	"825"	"26"	"36.000"	"29.000"	"0.113611934012699"	"16"	"0.0001859"	"0.0003492"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDIKGDPIPNEQVFIK"	"[R].lVDIkGDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K5(TMT6plex); K17(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.52509"	"2612.56070"	"2612.56304"	"-0.89"	"-0.00078"	"12/170"	"12"	"170"	"783547.711791992"	"HCD"	"MS2"	"10.54103"	"48.6"	"100.000"	"66.0007"	"21351"	"21351"	"21321"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"169.4"	""	"101.2"	""	"69.8"	""	"42.0"	""	"35.7"	"38.0"	""	"286"	"25"	"31.000"	"24.000"	"0.0476799770251426"	"14"	"0"	"0.0001152"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDIKGDPIPNEQVFIK"	"[R].lVDIkGDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K5(TMT6plex); K17(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.52637"	"2612.56455"	"2612.56304"	"0.58"	"0.00050"	"7/170"	"7"	"170"	"807053.479187012"	"HCD"	"MS2"	"0"	"48.6"	"100.000"	"65.8866"	"21357"	"21357"	"21331"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"176.1"	""	"108.2"	""	"66.0"	""	"33.9"	"1.3"	"32.4"	"36.4"	""	"273"	"30"	"31.000"	"24.000"	"0.0149669273773545"	"15"	"0"	"0.0001012"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDIKGDPIPNEQVFIK"	"[R].lVDIkGDPIPNEqVFIk.[A]"	"N-Term(TMT6plex); K5(TMT6plex); Q13(Deamidated); K17(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"871.86011"	"2613.56577"	"2613.54705"	"7.16"	"0.00624"	"6/170"	"6"	"170"	"444643.051452637"	"HCD"	"MS2"	"62.03815"	"33.8"	"100.000"	"65.9615"	"21335"	"21335"	"21305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.9"	""	"67.6"	""	"49.7"	""	"35.7"	""	"23.3"	"32.4"	""	"273"	"21"	"31.000"	"24.000"	"0.108926274812079"	"14"	"0.001058"	"0.01455"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDIKGDPIPNEQVFIK"	"[R].lVDIkGDPIPnEQVFIk.[A]"	"N-Term(TMT6plex); K5(TMT6plex); N11(Deamidated); K17(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"871.86011"	"2613.56577"	"2613.54705"	"7.16"	"0.00624"	"6/170"	"6"	"170"	"444643.051452637"	"HCD"	"MS2"	"62.03815"	"33.8"	"100.000"	"65.9615"	"21335"	"21335"	"21305"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.9"	""	"67.6"	""	"49.7"	""	"35.7"	""	"23.3"	"32.4"	""	"273"	"21"	"31.000"	"24.000"	"0.108926274812079"	"14"	"0.0009404"	"0.01007"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEKPFLLPVESVYSIPGR"	"[R].dLEkPFLLPVESVYSIPGR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"873.17108"	"2617.49869"	"2617.50055"	"-0.71"	"-0.00062"	"13/202"	"13"	"202"	"2142595.41790771"	"HCD"	"MS2"	"2.01047"	"72.3"	"100.000"	"75.1776"	"25140"	"25140"	"25119"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"132.5"	""	"96.8"	""	"120.9"	""	"111.4"	"0.0"	"111.9"	"109.1"	""	"732"	"35"	"35.000"	"28.000"	"0.0110022392676193"	"15"	"0"	"1.505E-05"	"1.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEKPFLLPVESVYSIPGR"	"[R].dLEkPFLLPVESVYSIPGR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"873.17120"	"2617.49906"	"2617.50055"	"-0.57"	"-0.00050"	"14/202"	"14"	"202"	"707108.627807617"	"HCD"	"MS2"	"1.672904"	"32.3"	"100.000"	"75.4892"	"25267"	"25267"	"25247"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.3"	""	"45.0"	""	"52.2"	""	"49.8"	"1.1"	"57.7"	"48.9"	""	"728"	"45"	"35.000"	"28.000"	"0.00123623599222909"	"15"	"0"	"7.132E-06"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEKPFLLPVESVYSIPGR"	"[R].dLEkPFLLPVESVYSIPGR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"873.17145"	"2617.49979"	"2617.50055"	"-0.29"	"-0.00025"	"13/202"	"13"	"202"	"842883.543945313"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"75.4941"	"25218"	"25218"	"25201"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"55.9"	""	"51.6"	""	"52.9"	""	"51.6"	""	"57.1"	"64.8"	""	"714"	"37"	"35.000"	"28.000"	"0.00652631777162959"	"15"	"0"	"5.333E-06"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEKPFLLPVESVYSIPGR"	"[R].dLEkPFLLPVESVYSIPGR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"873.17163"	"2617.50034"	"2617.50055"	"-0.08"	"-0.00007"	"20/202"	"20"	"202"	"1518875.77648926"	"HCD"	"MS2"	"4.657993"	"54.5"	"100.000"	"75.1526"	"25078"	"25078"	"25057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"97.9"	""	"77.1"	""	"87.6"	""	"88.8"	""	"78.3"	"87.7"	""	"714"	"37"	"35.000"	"28.000"	"0.00672462724947859"	"19"	"0"	"3.306E-06"	"1.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEKPFLLPVESVYSIPGR"	"[R].dLEkPFLLPVESVYSIPGR.[G]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.13098"	"2617.50210"	"2617.50055"	"0.59"	"0.00039"	"13/202"	"13"	"202"	"1158553.37780762"	"HCD"	"MS2"	"13.75366"	"18.9"	"100.000"	"75.3159"	"25197"	"25197"	"25167"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.8"	""	"21.2"	""	"25.5"	""	"31.3"	"1.6"	"35.3"	"39.0"	""	"701"	"14"	"35.000"	"28.000"	"1.45776668978155"	"13"	"0"	"3.821E-05"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.8286"	"0.0000"	"1"	"1"	"1"	"656.60864"	"2623.41274"	"2623.41721"	"-1.70"	"-0.00112"	"22/182"	"22"	"182"	"3770026.23260498"	"HCD"	"MS2"	"2.538293"	"49.1"	"100.000"	"83.2304"	"28414"	"28414"	"28397"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"64.6"	""	"56.8"	""	"70.5"	""	"93.1"	""	"87.0"	"94.7"	""	"1401"	"35"	"38.000"	"31.000"	"0.0203426786945235"	"21"	"0"	"4.669E-06"	"1.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.8140"	"0.0000"	"1"	"1"	"1"	"656.60870"	"2623.41298"	"2623.41721"	"-1.61"	"-0.00106"	"17/182"	"17"	"182"	"4330629.03747559"	"HCD"	"MS2"	"2.285079"	"56.7"	"100.000"	"83.2078"	"28353"	"28353"	"28335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.9"	""	"68.5"	""	"70.8"	""	"128.8"	"1.0"	"96.8"	"107.9"	""	"1402"	"43"	"38.000"	"31.000"	"0.00387006284935811"	"24"	"0"	"2.644E-06"	"1.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8868"	"0.0000"	"1"	"1"	"1"	"875.14252"	"2623.41300"	"2623.41721"	"-1.61"	"-0.00140"	"16/182"	"16"	"182"	"1336513.63012695"	"HCD"	"MS2"	"0"	"29.7"	"100.000"	"83.0783"	"28351"	"28351"	"28333"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.2"	""	"36.8"	""	"33.8"	""	"70.5"	"0.4"	"50.3"	"53.8"	""	"1396"	"53"	"38.000"	"31.000"	"0.000357977246025973"	"21"	"0"	"7.971E-07"	"1.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9796"	"0.0000"	"1"	"1"	"1"	"875.14288"	"2623.41410"	"2623.41721"	"-1.19"	"-0.00104"	"18/182"	"18"	"182"	"2425065.34521484"	"HCD"	"MS2"	"0"	"49.5"	"100.000"	"83.3867"	"28478"	"28478"	"28461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"57.1"	""	"54.4"	""	"64.7"	""	"104.4"	"0.2"	"80.6"	"107.9"	""	"1407"	"49"	"38.000"	"31.000"	"0.000859536060925987"	"17"	"0"	"2.374E-06"	"1.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"875.14325"	"2623.41520"	"2623.41721"	"-0.77"	"-0.00067"	"16/182"	"16"	"182"	"1010284.39239502"	"HCD"	"MS2"	"0"	"25.4"	"100.000"	"82.5389"	"28081"	"28081"	"28064"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"33.7"	""	"30.3"	""	"34.4"	""	"50.6"	"0.3"	"42.9"	"48.8"	""	"1405"	"56"	"38.000"	"31.000"	"0.00018477632643065"	"21"	"0"	"4.478E-07"	"1.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"875.14331"	"2623.41538"	"2623.41721"	"-0.70"	"-0.00061"	"10/182"	"10"	"182"	"136513.932067871"	"HCD"	"MS2"	"13.91189"	"4.1"	"100.000"	"83.8248"	"28605"	"28605"	"28580"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.5"	""	"4.9"	""	"7.1"	""	"8.5"	""	"5.4"	"7.2"	""	"1403"	"27"	"38.000"	"31.000"	"0.127065507497265"	"18"	"0.0001308"	"0.0002646"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.7576"	"0.0000"	"1"	"1"	"1"	"656.60938"	"2623.41567"	"2623.41721"	"-0.59"	"-0.00038"	"22/182"	"22"	"182"	"1573575.59240723"	"HCD"	"MS2"	"11.79957"	"26.3"	"100.000"	"82.3560"	"28057"	"28057"	"28030"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.2"	""	"36.3"	""	"39.7"	""	"47.2"	""	"47.4"	"50.5"	""	"1400"	"33"	"38.000"	"31.000"	"0.0344427674977016"	"23"	"0"	"3.509E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"875.14349"	"2623.41593"	"2623.41721"	"-0.49"	"-0.00043"	"13/182"	"13"	"182"	"405702.619567871"	"HCD"	"MS2"	"3.260942"	"11.2"	"100.000"	"82.6883"	"28192"	"28192"	"28173"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.9"	""	"16.3"	""	"14.6"	""	"22.9"	""	"14.3"	"22.2"	""	"1406"	"34"	"38.000"	"31.000"	"0.0283110075130797"	"19"	"0"	"5.516E-06"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"875.14355"	"2623.41611"	"2623.41721"	"-0.42"	"-0.00037"	"17/182"	"17"	"182"	"862346.136108398"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"83.5094"	"28477"	"28477"	"28460"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.5"	""	"31.2"	""	"28.7"	""	"47.5"	""	"37.8"	"45.3"	""	"1408"	"68"	"38.000"	"31.000"	"1.21219547679015E-05"	"25"	"0"	"4.21E-07"	"1.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"875.14374"	"2623.41666"	"2623.41721"	"-0.21"	"-0.00018"	"18/182"	"18"	"182"	"740882.756591797"	"HCD"	"MS2"	"37.27118"	"21.2"	"100.000"	"82.2548"	"27965"	"27965"	"27936"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.1"	""	"33.7"	""	"36.4"	""	"36.0"	""	"33.6"	"33.6"	""	"1397"	"23"	"38.000"	"31.000"	"0.335093813872727"	"16"	"0"	"5.26E-05"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"875.14386"	"2623.41703"	"2623.41721"	"-0.07"	"-0.00006"	"16/182"	"16"	"182"	"269944.559875488"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"83.7437"	"28623"	"28623"	"28603"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.6"	""	"6.1"	""	"12.6"	""	"15.7"	""	"11.7"	"17.1"	""	"1396"	"35"	"38.000"	"31.000"	"0.0206945230988799"	"18"	"0"	"8.53E-06"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.7353"	"0.0000"	"1"	"1"	"1"	"656.60974"	"2623.41713"	"2623.41721"	"-0.03"	"-0.00002"	"22/182"	"22"	"182"	"1972754.69726563"	"HCD"	"MS2"	"7.47282"	"31.7"	"100.000"	"82.3495"	"28003"	"28003"	"27984"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.0"	""	"43.4"	""	"44.2"	""	"64.0"	"3.0"	"48.6"	"56.5"	""	"1394"	"34"	"38.000"	"31.000"	"0.0253065404174761"	"24"	"0"	"2.344E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"875.14392"	"2623.41721"	"2623.41721"	"0.00"	"0.00000"	"23/182"	"23"	"182"	"1087940.5881958"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"82.3031"	"28035"	"28035"	"28014"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.5"	""	"39.3"	""	"37.5"	""	"48.6"	""	"41.7"	"45.0"	""	"1395"	"38"	"38.000"	"31.000"	"0.00994361296537527"	"15"	"0"	"6.895E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"875.14398"	"2623.41739"	"2623.41721"	"0.07"	"0.00006"	"6/182"	"6"	"182"	"150996.897705078"	"HCD"	"MS2"	"15.372"	"5.7"	"100.000"	"82.8874"	"28223"	"28223"	"28192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.3"	""	"7.1"	""	"8.7"	""	"10.8"	""	"7.6"	"10.7"	""	"1398"	"7"	"38.000"	"31.000"	"15.5409361356533"	"15"	"0.0002277"	"0.001283"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"4"	"4"	"0.6316"	"0.0000"	"1"	"1"	"1"	"656.60999"	"2623.41811"	"2623.41721"	"0.34"	"0.00023"	"11/182"	"11"	"182"	"1561768.77044678"	"HCD"	"MS2"	"15.34711"	"26.9"	"100.000"	"82.5360"	"28130"	"28130"	"28109"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"40.4"	""	"34.2"	""	"39.5"	""	"50.2"	""	"42.6"	"49.2"	""	"1394"	"19"	"38.000"	"31.000"	"0.920943057028043"	"20"	"0"	"7.808E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIGDHGDELFSVFGSPFLK"	"[K].tVIGDHGDELFSVFGSPFLk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"875.14429"	"2623.41831"	"2623.41721"	"0.42"	"0.00037"	"18/182"	"18"	"182"	"4482150.16040039"	"HCD"	"MS2"	"0"	"88.1"	"100.000"	"83.2034"	"28352"	"28352"	"28335"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"101.5"	""	"96.4"	""	"112.1"	""	"194.4"	""	"152.9"	"180.2"	""	"1396"	"65"	"38.000"	"31.000"	"2.04105835973465E-05"	"22"	"0"	"9.407E-07"	"1.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSPQTEPMITSIGNPAQVLK"	"[R].hSPQTEPmITSIGnPAqVLk.[V]"	"N-Term(TMT6plex); M8(Oxidation); N14(Deamidated); Q17(Deamidated); K20(TMT6plex)"	"1"	"1"	"Q80WL1"	"Gliomedin OS=Rattus norvegicus OX=10116 GN=Gldn PE=1 SV=1"	"Q80WL1"	"Gliomedin OS=Rattus norvegicus OX=10116 GN=Gldn PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.47748"	"2624.41788"	"2624.40057"	"6.59"	"0.00577"	"4/202"	"4"	"202"	"96207.9938964844"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"83.9347"	"28701"	"28701"	"28677"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.3"	""	"4.0"	""	"2.8"	""	"11.0"	""	"4.9"	"12.8"	""	"1273"	"1"	"38.000"	"31.000"	"47.5114634728006"	"13"	"0.009271"	"0.416"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQMPDQGMTSADDFFQGTK"	"[R].fQMPDQGmTSADDFFQGTk.[A]"	"N-Term(TMT6plex); M8(Oxidation); K19(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"875.74994"	"2625.23526"	"2625.23655"	"-0.49"	"-0.00043"	"10/204"	"10"	"204"	"435207.324890137"	"HCD"	"MS2"	"8.115169"	"24.7"	"100.000"	"64.6836"	"20866"	"20866"	"20835"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.1"	""	"30.4"	""	"40.6"	""	"43.0"	""	"42.0"	"46.5"	""	"759"	"34"	"35.000"	"28.000"	"0.0164138998877786"	"21"	"0.0001889"	"0.0005386"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQMPDQGMTSADDFFQGTK"	"[R].fQMPDQGmTSADDFFQGTk.[A]"	"N-Term(TMT6plex); M8(Oxidation); K19(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.5758"	"0.0000"	"1"	"1"	"1"	"875.75067"	"2625.23746"	"2625.23655"	"0.35"	"0.00031"	"13/204"	"13"	"204"	"394875.19140625"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"64.7471"	"20839"	"20839"	"20809"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.7"	""	"35.3"	""	"35.2"	""	"47.2"	""	"42.0"	"43.0"	""	"766"	"33"	"35.000"	"28.000"	"0.0204267264971759"	"19"	"7.476E-05"	"0.0002012"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAMAATPVPAASVAAAAAAVAAGSK"	"[R].aAAMAATPVPAASVAAAAAAVAAGSk.[R]"	"N-Term(TMT6plex); K26(TMT6plex)"	"1"	"1"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"875.83264"	"2625.48337"	"2625.47983"	"1.35"	"0.00118"	"13/236"	"13"	"236"	"159766.512451172"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"76.1037"	"25466"	"25466"	"25441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.5"	""	"7.2"	""	"6.7"	""	"8.6"	""	"14.6"	"13.8"	""	"866"	"48"	"36.000"	"29.000"	"0.000681534580313873"	"16"	"0"	"2.03E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVVGMGNSGTDIAVEASHLAK"	"[R].vLVVGMGNSGTDIAVEASHLAk.[K]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"876.15662"	"2626.45530"	"2626.46384"	"-3.25"	"-0.00285"	"20/214"	"20"	"214"	"411035.540283203"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"64.9363"	"20916"	"20916"	"20889"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.2"	""	"29.4"	""	"31.8"	""	"24.1"	""	"38.5"	"33.5"	""	"1079"	"95"	"37.000"	"30.000"	"1.55952179653617E-08"	"18"	"0"	"2.461E-07"	"1.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVVGMGNSGTDIAVEASHLAK"	"[R].vLVVGMGNSGTDIAVEASHLAk.[K]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9605"	"0.0000"	"1"	"1"	"1"	"876.16058"	"2626.46720"	"2626.46384"	"1.28"	"0.00112"	"17/214"	"17"	"214"	"406314.156799316"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"64.9096"	"20958"	"20958"	"20931"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.3"	""	"25.6"	""	"26.0"	""	"30.1"	""	"37.5"	"39.7"	""	"993"	"76"	"36.000"	"29.000"	"1.17738704486101E-06"	"21"	"0"	"1.128E-06"	"1.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPFTQNLGLEELGIELDPK"	"[R].rPFTQNLGLEELGIELDPk.[G]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"876.49792"	"2627.47922"	"2627.48087"	"-0.63"	"-0.00055"	"12/206"	"12"	"206"	"354515.646118164"	"HCD"	"MS2"	"14.33391"	"16.6"	"100.000"	"70.4380"	"23154"	"23154"	"23123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"24.8"	""	"23.2"	""	"23.1"	""	"20.2"	"0.9"	"35.1"	"29.7"	""	"922"	"14"	"36.000"	"29.000"	"2.01233798662716"	"15"	"0.0001308"	"0.0002149"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPFTQNLGLEELGIELDPK"	"[R].rPFTQNLGLEELGIELDPk.[G]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"876.49963"	"2627.48435"	"2627.48087"	"1.32"	"0.00116"	"22/206"	"22"	"206"	"539351.965393066"	"HCD"	"MS2"	"23.01861"	"27.7"	"100.000"	"70.2471"	"23128"	"23128"	"23098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.9"	""	"35.2"	""	"21.8"	""	"37.1"	""	"101.8"	"41.4"	""	"882"	"23"	"36.000"	"29.000"	"0.21549569047019"	"17"	"0"	"2.072E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFVPTGFSAFPSELLHAPEK"	"[K].vFVPTGFSAFPSELLHAPEk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"877.82336"	"2631.45554"	"2631.45868"	"-1.19"	"-0.00105"	"8/180"	"8"	"180"	"481156.912719727"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"79.4993"	"26841"	"26841"	"26817"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.2"	""	"21.2"	""	"25.1"	""	"19.0"	""	"20.7"	"17.6"	""	"1109"	"53"	"37.000"	"30.000"	"0.000262967180826806"	"23"	"0"	"2.246E-05"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFVPTGFSAFPSELLHAPEK"	"[K].vFVPTGFSAFPSELLHAPEk.[W]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"877.82422"	"2631.45810"	"2631.45868"	"-0.22"	"-0.00019"	"14/180"	"14"	"180"	"448180.397155762"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"79.4409"	"26868"	"26868"	"26847"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"25.4"	""	"18.8"	""	"18.1"	""	"19.0"	""	"19.5"	"21.5"	""	"1081"	"51"	"37.000"	"30.000"	"0.000470755820371261"	"21"	"0"	"2.349E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPGFLENQKDPLAVDK"	"[R].eFPGFLENQkDPLAVDk.[I]"	"N-Term(TMT6plex); K10(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.82886"	"2634.47202"	"2634.47461"	"-0.99"	"-0.00087"	"17/176"	"17"	"176"	"2772905.58972168"	"HCD"	"MS2"	"8.909058"	"198.2"	"100.000"	"62.8750"	"20127"	"20127"	"20099"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"285.2"	""	"196.2"	""	"234.6"	""	"401.2"	"0.8"	"368.9"	"392.2"	""	"1057"	"29"	"37.000"	"30.000"	"0.0665342080133218"	"14"	"0"	"6.896E-06"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPGFLENQKDPLAVDK"	"[R].eFPGFLENQkDPLAVDk.[I]"	"N-Term(TMT6plex); K10(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"1"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"878.82916"	"2634.47293"	"2634.47461"	"-0.64"	"-0.00056"	"12/176"	"12"	"176"	"633474.316467285"	"HCD"	"MS2"	"0"	"63.2"	"100.000"	"63.1317"	"20179"	"20179"	"20153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"85.4"	""	"68.9"	""	"69.1"	""	"128.5"	""	"120.3"	"128.2"	""	"1053"	"34"	"37.000"	"30.000"	"0.0209603425296416"	"15"	"0.0001889"	"0.0004398"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPGFLENQKDPLAVDK"	"[R].eFPGFLENQkDPLAVDk.[I]"	"N-Term(TMT6plex); K10(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.82928"	"2634.47330"	"2634.47461"	"-0.50"	"-0.00044"	"16/176"	"16"	"176"	"2390735.63067627"	"HCD"	"MS2"	"7.289597"	"189.3"	"100.000"	"62.8074"	"20046"	"20046"	"20025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"286.5"	""	"178.7"	""	"223.3"	""	"377.9"	"1.1"	"351.9"	"375.2"	""	"1048"	"33"	"37.000"	"30.000"	"0.0246792119032003"	"15"	"0"	"2.827E-05"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPGFLENQKDPLAVDK"	"[R].eFPGFLENQkDPLAVDk.[I]"	"N-Term(TMT6plex); K10(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.82971"	"2634.47458"	"2634.47461"	"-0.01"	"-0.00001"	"10/176"	"10"	"176"	"457233.972229004"	"HCD"	"MS2"	"0"	"42.2"	"100.000"	"63.2223"	"20269"	"20269"	"20243"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"61.1"	""	"40.2"	""	"54.0"	""	"65.5"	""	"86.2"	"94.0"	""	"1041"	"24"	"37.000"	"30.000"	"0.18553281494836"	"14"	"0.0001889"	"0.001052"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPGFLENQKDPLAVDK"	"[R].eFPGFLENQkDPLAVDk.[I]"	"N-Term(TMT6plex); K10(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"659.37415"	"2634.47475"	"2634.47461"	"0.05"	"0.00003"	"14/176"	"14"	"176"	"4087624.23419189"	"HCD"	"MS2"	"29.98155"	"123.3"	"100.000"	"62.8796"	"20129"	"20129"	"20099"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"174.9"	""	"123.3"	""	"150.9"	""	"247.0"	"1.3"	"235.9"	"236.2"	""	"1041"	"23"	"37.000"	"30.000"	"0.245708812977699"	"14"	"0"	"6.456E-06"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMDIDHILDWQPPEVIQK"	"[K].tMDIDHILDWQPPEVIQk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"5"	"5"	"0.8182"	"0.0000"	"1"	"1"	"1"	"528.08856"	"2636.41370"	"2636.41583"	"-0.81"	"-0.00043"	"8/176"	"8"	"176"	"648695.37713623"	"HCD"	"MS2"	"36.42025"	"14.2"	"100.000"	"79.1496"	"26750"	"26750"	"26719"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.9"	""	"20.5"	""	"22.8"	""	"22.8"	""	"23.5"	"24.5"	""	"1482"	"11"	"38.000"	"31.000"	"6.0648240800788"	"15"	"0"	"0.0001219"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMDIDHILDWQPPEVIQK"	"[K].tMDIDHILDWQPPEVIQk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.47620"	"2636.41404"	"2636.41583"	"-0.68"	"-0.00060"	"14/176"	"14"	"176"	"1097882.88238525"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"79.2331"	"26784"	"26784"	"26767"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"44.8"	""	"32.9"	""	"30.7"	""	"32.6"	""	"40.0"	"41.1"	""	"1479"	"35"	"38.000"	"31.000"	"0.0242068443862901"	"15"	"0"	"1.601E-05"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMDIDHILDWQPPEVIQK"	"[K].tMDIDHILDWQPPEVIQk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.47632"	"2636.41440"	"2636.41583"	"-0.54"	"-0.00048"	"14/176"	"14"	"176"	"528797.375610352"	"HCD"	"MS2"	"28.76662"	"14.0"	"100.000"	"78.9868"	"26632"	"26632"	"26609"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"20.9"	""	"19.3"	""	"21.8"	""	"20.8"	""	"29.3"	"21.1"	""	"1475"	"39"	"38.000"	"31.000"	"0.00963301029997232"	"15"	"0"	"8.345E-06"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMDIDHILDWQPPEVIQK"	"[K].tMDIDHILDWQPPEVIQk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"879.47668"	"2636.41550"	"2636.41583"	"-0.12"	"-0.00011"	"13/176"	"13"	"176"	"1133192.24145508"	"HCD"	"MS2"	"1.497709"	"28.4"	"100.000"	"79.2846"	"26754"	"26754"	"26737"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"49.4"	""	"40.9"	""	"41.5"	""	"35.8"	"0.6"	"52.9"	"47.7"	""	"1472"	"41"	"38.000"	"31.000"	"0.0063661638821891"	"20"	"0"	"9.493E-06"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMDIDHILDWQPPEVIQK"	"[K].tMDIDHILDWQPPEVIQk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"879.49323"	"2636.46512"	"2636.41583"	"18.70"	"0.01643"	"11/176"	"11"	"176"	"463178.754089355"	"HCD"	"MS2"	"28.83458"	"11.7"	"100.000"	"78.9287"	"26659"	"26659"	"26639"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"14.1"	""	"23.3"	""	"15.3"	""	"17.9"	""	"20.8"	"20.0"	""	"1095"	"30"	"37.000"	"30.000"	"0.0600321812388393"	"16"	"0.002829"	"0.04868"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYPEEMIQTGISAIDGMNSIAR"	"[R].iYPEEMIQTGISAIDGMNSIAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"880.11896"	"2638.34232"	"2638.34179"	"0.20"	"0.00018"	"7/226"	"7"	"226"	"50964.8299560547"	"HCD"	"MS2"	"0"	"0.5"	"100.000"	"95.4775"	"32870"	"32870"	"32861"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	""	""	"2.7"	"2.5"	""	"1492"	"8"	"38.000"	"31.000"	"12.4376642056309"	"14"	"0.0003839"	"0.001857"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDKDGIHNLENITFTK"	"[R].vIDkDGIHNLENITFTk.[R]"	"N-Term(TMT6plex); K4(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"661.88690"	"2644.52578"	"2644.52771"	"-0.73"	"-0.00048"	"14/180"	"14"	"180"	"6840472.52941895"	"HCD"	"MS2"	"31.74181"	"188.5"	"100.000"	"56.2210"	"17360"	"17360"	"17339"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"287.5"	""	"244.3"	""	"231.2"	""	"321.3"	"2.2"	"360.2"	"339.2"	""	"694"	"18"	"35.000"	"28.000"	"0.59337531433633"	"14"	"0"	"4.134E-05"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALNDGNFIPVLGFGTTVPEK"	"[R].vALNDGNFIPVLGFGTTVPEk.[V]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"882.83435"	"2646.48850"	"2646.49071"	"-0.84"	"-0.00074"	"11/224"	"11"	"224"	"125504.876647949"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"85.2963"	"29205"	"29205"	"29179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.8"	""	"6.2"	""	"4.0"	""	"4.9"	""	"3.9"	"2.7"	""	"938"	"36"	"36.000"	"29.000"	"0.0120829462263421"	"15"	"0.0001859"	"0.0003572"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALNDGNFIPVLGFGTTVPEK"	"[R].vALNDGNFIPVLGFGTTVPEk.[V]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"882.83447"	"2646.48886"	"2646.49071"	"-0.70"	"-0.00061"	"9/224"	"9"	"224"	"136826.576599121"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"85.3719"	"29286"	"29286"	"29266"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.5"	""	"4.4"	""	"6.2"	""	"5.9"	""	"5.9"	"9.5"	""	"937"	"40"	"36.000"	"29.000"	"0.00420445390223601"	"15"	"0.0001308"	"0.0003032"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALNDGNFIPVLGFGTTVPEK"	"[R].vALNDGNFIPVLGFGTTVPEk.[V]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"4"	"4"	"0.9143"	"0.0000"	"1"	"1"	"1"	"662.37781"	"2646.48940"	"2646.49071"	"-0.49"	"-0.00033"	"16/224"	"16"	"224"	"685821.064819336"	"HCD"	"MS2"	"28.41518"	"14.9"	"100.000"	"85.0670"	"29162"	"29162"	"29138"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.0"	""	"25.3"	""	"27.7"	""	"14.5"	""	"22.1"	"23.7"	""	"931"	"70"	"36.000"	"29.000"	"4.44549048792978E-06"	"23"	"0"	"1.671E-06"	"1.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALNDGNFIPVLGFGTTVPEK"	"[R].vALNDGNFIPVLGFGTTVPEk.[V]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"882.83478"	"2646.48978"	"2646.49071"	"-0.35"	"-0.00031"	"14/224"	"14"	"224"	"814080.989013672"	"HCD"	"MS2"	"25.02776"	"19.8"	"100.000"	"84.9699"	"29123"	"29123"	"29106"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.9"	""	"28.9"	""	"32.1"	""	"32.8"	""	"34.1"	"32.5"	""	"929"	"44"	"36.000"	"29.000"	"0.001678748811961"	"15"	"0"	"2.778E-06"	"1.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALNDGNFIPVLGFGTTVPEK"	"[R].vALNDGNFIPVLGFGTTVPEk.[V]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"0.9831"	"0.0000"	"1"	"1"	"1"	"882.83545"	"2646.49179"	"2646.49071"	"0.41"	"0.00036"	"18/224"	"18"	"224"	"1175208.33007813"	"HCD"	"MS2"	"9.572492"	"26.8"	"100.000"	"84.9687"	"29071"	"29071"	"29051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.9"	""	"45.7"	""	"47.9"	""	"27.6"	""	"44.0"	"40.0"	""	"918"	"59"	"36.000"	"29.000"	"5.8319351429072E-05"	"17"	"0"	"3.286E-06"	"1.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VALNDGNFIPVLGFGTTVPEK"	"[R].vALNDGNFIPVLGFGTTVPEk.[V]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"4"	"4"	"0.9286"	"0.0000"	"1"	"1"	"1"	"662.37848"	"2646.49209"	"2646.49071"	"0.52"	"0.00034"	"15/224"	"15"	"224"	"771699.852478027"	"HCD"	"MS2"	"17.66452"	"15.7"	"100.000"	"84.9822"	"29077"	"29077"	"29051"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"23.5"	""	"24.8"	""	"29.0"	""	"19.3"	""	"21.8"	"30.5"	""	"911"	"42"	"36.000"	"29.000"	"0.00279568593352564"	"18"	"0"	"2.975E-06"	"1.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGMGNLGPAGMGMEGIGFGINK"	"[K].gIGMGNLGPAGMGmEGIGFGINk.[I]"	"N-Term(TMT6plex); M14(Oxidation); K23(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"3"	"3"	"0.6304"	"0.0000"	"1"	"1"	"1"	"884.79211"	"2652.36179"	"2652.37121"	"-3.55"	"-0.00314"	"15/210"	"15"	"210"	"238228.373596191"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"71.4898"	"23635"	"23635"	"23610"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.8"	""	"13.1"	""	"20.2"	""	"17.4"	""	"22.2"	"25.8"	""	"1535"	"46"	"38.000"	"31.000"	"0.00175016254026032"	"17"	"0"	"4.738E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGMGNLGPAGMGMEGIGFGINK"	"[K].gIGMGNLGPAGmGMEGIGFGINk.[I]"	"N-Term(TMT6plex); M12(Oxidation); K23(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"3"	"3"	"0.6304"	"0.0000"	"1"	"2"	"2"	"884.79211"	"2652.36179"	"2652.37121"	"-3.55"	"-0.00314"	"15/210"	"15"	"210"	"238228.373596191"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"71.4898"	"23635"	"23635"	"23610"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"20.8"	""	"13.1"	""	"20.2"	""	"17.4"	""	"22.2"	"25.8"	""	"1535"	"46"	"38.000"	"31.000"	"0.00175016254026032"	"17"	"0"	"4.738E-05"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGKVNPDDVGGEALGR"	"[K].aAVNGLWGkVNPDDVGGEALGR.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"885.15253"	"2653.44303"	"2653.44622"	"-1.20"	"-0.00106"	"22/214"	"22"	"214"	"1737265.94873047"	"HCD"	"MS2"	"0"	"97.1"	"100.000"	"58.1603"	"18153"	"18153"	"18123"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"241.0"	""	"192.7"	""	"190.1"	""	"100.0"	"1.1"	"106.5"	"79.4"	""	"1310"	"53"	"38.000"	"31.000"	"0.00035912141202316"	"16"	"0"	"4.973E-07"	"1.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGKVNPDDVGGEALGR"	"[K].aAVNGLWGkVNPDDVGGEALGR.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"885.15308"	"2653.44468"	"2653.44622"	"-0.58"	"-0.00051"	"22/214"	"22"	"214"	"1807720.69573975"	"HCD"	"MS2"	"0"	"99.0"	"100.000"	"58.3201"	"18272"	"18272"	"18245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"247.6"	""	"201.4"	""	"202.4"	""	"97.8"	"0.2"	"97.8"	"81.5"	""	"1311"	"53"	"38.000"	"31.000"	"0.000323275428492461"	"20"	"0"	"2.94E-07"	"1.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEFLEETLTPEKYPK"	"[K].iEEFLEETLTPEkYPk.[L]"	"N-Term(TMT6plex); K13(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"885.17010"	"2653.49576"	"2653.49435"	"0.53"	"0.00047"	"8/146"	"8"	"146"	"572777.202148438"	"HCD"	"MS2"	"8.83655"	"30.1"	"100.000"	"77.8827"	"26182"	"26182"	"26153"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.3"	""	"36.8"	""	"40.9"	""	"48.4"	""	"58.5"	"68.7"	""	"836"	"7"	"36.000"	"29.000"	"9.01937163025814"	"13"	"0.000523"	"0.003035"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLISSEDVLHSWAVPSLGLK"	"[R].mLISSEDVLHSWAVPSLGLk.[T]"	"N-Term(TMT6plex); M1(Oxidation); K20(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"886.16510"	"2656.48075"	"2656.47843"	"0.87"	"0.00077"	"9/176"	"9"	"176"	"123527.391601563"	"HCD"	"MS2"	"49.78114"	"6.6"	"100.000"	"77.0797"	"25905"	"25905"	"25877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.7"	""	"6.7"	""	"11.2"	""	"13.9"	""	"10.6"	"13.4"	""	"1033"	"17"	"37.000"	"30.000"	"0.966207325498936"	"14"	"0.000523"	"0.002982"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGFGHLSPTGTTEFWLGNEK"	"[K].eGFGHLSPTGTTEFWLGNEk.[I]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.12769"	"2665.36850"	"2665.36624"	"0.85"	"0.00076"	"9/192"	"9"	"192"	"1186810.23187256"	"HCD"	"MS2"	"17.00434"	"55.3"	"100.000"	"60.6778"	"19230"	"19230"	"19203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"102.7"	""	"87.7"	""	"62.9"	""	"85.0"	""	"100.2"	"87.6"	""	"1440"	"20"	"38.000"	"31.000"	"0.760908606633834"	"14"	"0"	"7.264E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEHNINVLEGDEQFINAAK"	"[R].lGEHNINVLEGDEQFINAAk.[I]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P00762"	"Anionic trypsin-1 OS=Rattus norvegicus OX=10116 GN=Prss1 PE=1 SV=1"	"P00762"	"Anionic trypsin-1 OS=Rattus norvegicus OX=10116 GN=Prss1 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"890.48120"	"2669.42905"	"2669.42990"	"-0.32"	"-0.00028"	"12/202"	"12"	"202"	"2644767.98596191"	"HCD"	"MS2"	"6.15379"	"76.8"	"100.000"	"56.9375"	"17653"	"17653"	"17627"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"88.8"	""	"59.3"	""	"54.8"	""	"162.1"	""	"204.5"	"168.4"	""	"1332"	"20"	"38.000"	"31.000"	"0.675264982900628"	"16"	"0"	"0.0001486"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEHNINVLEGDEQFINAAK"	"[R].lGEHNINVLEGDEQFINAAk.[I]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P00762"	"Anionic trypsin-1 OS=Rattus norvegicus OX=10116 GN=Prss1 PE=1 SV=1"	"P00762"	"Anionic trypsin-1 OS=Rattus norvegicus OX=10116 GN=Prss1 PE=1 SV=1"	"0"	"4"	"4"	"0.2857"	"0.0000"	"1"	"1"	"1"	"668.11273"	"2669.42910"	"2669.42990"	"-0.30"	"-0.00020"	"9/202"	"9"	"202"	"3846622.99157715"	"HCD"	"MS2"	"34.80264"	"90.2"	"100.000"	"57.2585"	"17838"	"17838"	"17813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.1"	""	"97.0"	""	"93.5"	""	"177.7"	""	"197.8"	"175.9"	""	"1330"	"14"	"38.000"	"31.000"	"2.86300195976987"	"23"	"0"	"7.783E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEHNINVLEGDEQFINAAK"	"[R].lGEHNINVLEGDEQFINAAk.[I]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P00762"	"Anionic trypsin-1 OS=Rattus norvegicus OX=10116 GN=Prss1 PE=1 SV=1"	"P00762"	"Anionic trypsin-1 OS=Rattus norvegicus OX=10116 GN=Prss1 PE=1 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"890.48138"	"2669.42960"	"2669.42990"	"-0.11"	"-0.00010"	"15/202"	"15"	"202"	"4337968.78179932"	"HCD"	"MS2"	"0"	"97.9"	"100.000"	"57.1524"	"17795"	"17795"	"17765"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"105.1"	"1.9"	"62.5"	""	"61.7"	""	"235.4"	""	"256.7"	"210.7"	""	"1330"	"35"	"38.000"	"31.000"	"0.0228466035353417"	"16"	"0"	"3.489E-05"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEHNINVLEGDEQFINAAK"	"[R].lGEHNINVLEGDEQFINAAk.[I]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P00762"	"Anionic trypsin-1 OS=Rattus norvegicus OX=10116 GN=Prss1 PE=1 SV=1"	"P00762"	"Anionic trypsin-1 OS=Rattus norvegicus OX=10116 GN=Prss1 PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"890.48145"	"2669.42978"	"2669.42990"	"-0.04"	"-0.00004"	"12/202"	"12"	"202"	"466275.019104004"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"57.4612"	"17921"	"17921"	"17893"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"27.4"	""	"18.6"	""	"24.7"	""	"34.0"	""	"41.7"	"41.5"	""	"1330"	"28"	"38.000"	"31.000"	"0.111897825061186"	"15"	"0"	"6.866E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVDGTAFVIFGVQDEDKK"	"[K].nVDGTAFVIFGVQDEDkk.[I]"	"N-Term(TMT6plex); K17(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"890.49689"	"2669.47611"	"2669.47534"	"0.29"	"0.00026"	"15/196"	"15"	"196"	"336849.339355469"	"HCD"	"MS2"	"3.797842"	"28.0"	"100.000"	"61.9297"	"19741"	"19741"	"19715"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"53.0"	""	"31.6"	""	"26.0"	""	"47.7"	"0.4"	"56.6"	"50.1"	""	"1110"	"41"	"37.000"	"30.000"	"0.00471295163645154"	"16"	"0"	"3.672E-05"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVDGTAFVIFGVQDEDKK"	"[K].nVDGTAFVIFGVQDEDkk.[I]"	"N-Term(TMT6plex); K17(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"890.49713"	"2669.47684"	"2669.47534"	"0.56"	"0.00050"	"10/196"	"10"	"196"	"208791.331848145"	"HCD"	"MS2"	"32.40844"	"19.3"	"100.000"	"61.8491"	"19655"	"19655"	"19625"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"26.8"	""	"22.9"	""	"28.5"	""	"31.6"	""	"39.0"	"35.5"	""	"1106"	"18"	"37.000"	"30.000"	"0.981126782932261"	"14"	"0.0003839"	"0.001631"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPMFVMGVNHEk.[Y]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"891.14929"	"2671.43332"	"2671.43519"	"-0.70"	"-0.00062"	"17/198"	"17"	"198"	"1384972.53790283"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"63.7548"	"20486"	"20486"	"20467"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"84.5"	""	"69.6"	""	"61.7"	""	"58.1"	"0.6"	"75.0"	"71.2"	""	"1428"	"51"	"38.000"	"31.000"	"0.000546635977334638"	"19"	"0"	"4.895E-06"	"1.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPMFVMGVNHEk.[Y]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.14972"	"2671.43460"	"2671.43519"	"-0.22"	"-0.00019"	"21/198"	"21"	"198"	"3776734.24871826"	"HCD"	"MS2"	"0"	"85.3"	"100.000"	"63.4439"	"20359"	"20359"	"20339"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"202.6"	""	"129.5"	""	"127.5"	""	"90.9"	""	"118.8"	"134.8"	""	"1420"	"79"	"38.000"	"31.000"	"9.68854026978134E-07"	"17"	"0"	"1.748E-07"	"1.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPMFVMGVNHEk.[Y]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.14984"	"2671.43497"	"2671.43519"	"-0.08"	"-0.00007"	"21/198"	"21"	"198"	"4390668.0411377"	"HCD"	"MS2"	"0"	"96.5"	"100.000"	"63.4338"	"20302"	"20302"	"20281"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"226.2"	""	"143.0"	""	"145.5"	""	"98.5"	""	"127.9"	"171.4"	""	"1423"	"82"	"38.000"	"31.000"	"4.83253384607126E-07"	"18"	"0"	"2.581E-07"	"1.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPMFVMGVNHEk.[Y]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"4"	"4"	"0.9565"	"0.0000"	"1"	"1"	"1"	"668.61420"	"2671.43496"	"2671.43519"	"-0.09"	"-0.00006"	"10/198"	"10"	"198"	"13332665.0934448"	"HCD"	"MS2"	"25.68069"	"196.5"	"73.955"	"63.5007"	"20330"	"20330"	"20313"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"266.4"	"2.7"	"187.4"	""	"202.1"	""	"366.1"	"4.7"	"462.6"	"376.4"	""	"1423"	"46"	"38.000"	"31.000"	"0.00182883659944005"	"17"	"0"	"9.038E-06"	"1.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPMFVMGVNHEk.[Y]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"891.14996"	"2671.43534"	"2671.43519"	"0.06"	"0.00005"	"18/198"	"18"	"198"	"683506.487731934"	"HCD"	"MS2"	"6.405048"	"46.7"	"100.000"	"63.8442"	"20470"	"20470"	"20441"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.3"	""	"73.9"	""	"68.3"	""	"62.4"	""	"75.3"	"87.3"	""	"1417"	"39"	"38.000"	"31.000"	"0.00944799934687715"	"17"	"0"	"1.36E-05"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPMFVMGVNHEk.[Y]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.61469"	"2671.43691"	"2671.43519"	"0.65"	"0.00043"	"10/198"	"10"	"198"	"14434455.2930908"	"HCD"	"MS2"	"28.59646"	"296.3"	"100.000"	"63.5224"	"20391"	"20391"	"20371"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"352.0"	""	"270.1"	""	"287.0"	""	"624.9"	""	"691.3"	"594.1"	""	"1420"	"50"	"38.000"	"31.000"	"0.000687477277945487"	"16"	"0"	"6.508E-06"	"1.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSGVKEEHSFTVMEFVLPR"	"[K].qSGVkEEHSFTVMEFVLPR.[F]"	"N-Term(TMT6plex); K5(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.36438"	"2678.43569"	"2678.43763"	"-0.72"	"-0.00048"	"8/204"	"8"	"204"	"4632397.16259766"	"HCD"	"MS2"	"10.04495"	"73.7"	"100.000"	"54.9544"	"16896"	"16896"	"16869"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"166.9"	""	"127.7"	""	"106.6"	""	"101.0"	""	"92.9"	"99.4"	""	"1458"	"24"	"38.000"	"31.000"	"0.316029430344509"	"14"	"0"	"7.042E-06"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSGVKEEHSFTVMEFVLPR"	"[K].qSGVkEEHSFTVMEFVLPR.[F]"	"N-Term(TMT6plex); K5(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"670.36493"	"2678.43789"	"2678.43763"	"0.10"	"0.00006"	"8/204"	"8"	"204"	"4296167.47607422"	"HCD"	"MS2"	"4.481357"	"67.3"	"100.000"	"54.9001"	"16820"	"16820"	"16796"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"164.9"	""	"111.5"	""	"101.2"	""	"88.3"	"1.0"	"82.5"	"83.8"	""	"1449"	"24"	"38.000"	"31.000"	"0.270419739322999"	"14"	"0"	"2.321E-06"	"1.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITKLATDVTK"	"[R].fPNAEFAEITkLATDVTk.[I]"	"N-Term(TMT6plex); K11(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"894.84961"	"2682.53427"	"2682.53213"	"0.80"	"0.00072"	"6/190"	"6"	"190"	"153615.910583496"	"HCD"	"MS2"	"17.3046"	"14.8"	"100.000"	"83.0628"	"28294"	"28294"	"28272"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.0"	""	"26.9"	""	"23.0"	""	"21.5"	""	"19.9"	"17.8"	""	"640"	"20"	"35.000"	"28.000"	"0.341310758793682"	"14"	"0.005072"	"0.1528"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITKLATDVTK"	"[R].fPNAEFAEITkLATDVTk.[I]"	"N-Term(TMT6plex); K11(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"894.84973"	"2682.53464"	"2682.53213"	"0.94"	"0.00084"	"7/190"	"7"	"190"	"216338.533081055"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"82.7537"	"28168"	"28168"	"28144"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"34.0"	""	"28.1"	""	"26.7"	""	"25.1"	"27.9"	""	"636"	"7"	"35.000"	"28.000"	"6.05936508312313"	"13"	"0.003788"	"0.09196"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGQDLVVLSLPITPEFIPSFR"	"[R].ePGQDLVVLSLPITPEFIPSFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"895.16705"	"2683.48661"	"2683.49082"	"-1.57"	"-0.00140"	"5/242"	"5"	"242"	"91490.0492553711"	"HCD"	"MS2"	"0"	"0.2"	"100.000"	"100.8954"	"34386"	"34386"	"34380"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	""	""	""	""	""	""	"2.0"	""	""	"1033"	"18"	"37.000"	"30.000"	"0.847364617857562"	"15"	"0.0001889"	"0.0008993"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGQDLVVLSLPITPEFIPSFR"	"[R].ePGQDLVVLSLPITPEFIPSFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"895.16870"	"2683.49155"	"2683.49082"	"0.27"	"0.00024"	"4/242"	"4"	"242"	"89582.4299926758"	"HCD"	"MS2"	"0"	""	"100.000"	"100.9314"	"34382"	"34382"	"34378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	""	""	""	""	""	"1000"	"13"	"36.000"	"30.000"	"2.3065878728019"	"15"	"0.000494"	"0.002674"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGQDLVVLSLPITPEFIPSFR"	"[R].ePGQDLVVLSLPITPEFIPSFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.1000"	"0.0000"	"1"	"1"	"1"	"895.16895"	"2683.49228"	"2683.49082"	"0.55"	"0.00049"	"7/242"	"7"	"242"	"80516.1194458008"	"HCD"	"MS2"	"0"	"0.2"	"100.000"	"100.6775"	"34318"	"34318"	"34314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	""	""	"2.4"	""	""	"1000"	"10"	"36.000"	"30.000"	"5.04626443038342"	"22"	"0.0001889"	"0.0009056"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KANVGFLPPFPTLDPEEK"	"[K].kANVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"896.18555"	"2686.54209"	"2686.54230"	"-0.08"	"-0.00007"	"12/180"	"12"	"180"	"1267655.89086914"	"HCD"	"MS2"	"46.35899"	"38.9"	"100.000"	"69.0130"	"22572"	"22572"	"22554"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"73.7"	""	"57.1"	""	"61.4"	""	"58.2"	""	"57.0"	"62.1"	""	"651"	"11"	"35.000"	"28.000"	"2.68256956436732"	"13"	"0"	"0.0001691"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KANVGFLPPFPTLDPEEK"	"[K].kANVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"896.18665"	"2686.54538"	"2686.54230"	"1.15"	"0.00103"	"12/180"	"12"	"180"	"871938.340148926"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"68.7095"	"22500"	"22500"	"22474"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"62.0"	""	"40.3"	""	"31.7"	""	"29.2"	""	"38.6"	"34.8"	""	"625"	"40"	"34.000"	"27.000"	"0.00316847308042713"	"15"	"0"	"1.05E-05"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KANVGFLPPFPTLDPEEK"	"[K].kANVGFLPPFPTLDPEEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"1"	"4"	"4"	"0.9600"	"0.0000"	"1"	"1"	"1"	"672.39215"	"2686.54677"	"2686.54230"	"1.67"	"0.00112"	"7/180"	"7"	"180"	"1241658.47650146"	"HCD"	"MS2"	"9.633488"	"30.0"	"100.000"	"68.9079"	"22581"	"22581"	"22554"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.1"	""	"40.2"	""	"49.2"	""	"50.1"	""	"46.1"	"47.7"	""	"605"	"25"	"34.000"	"27.000"	"0.104405981149096"	"15"	"0.0001889"	"0.0004986"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPmFVMGVNHEk.[Y]"	"N-Term(TMT6plex); M12(Oxidation); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.3803"	"0.0000"	"1"	"1"	"1"	"896.48047"	"2687.42685"	"2687.43010"	"-1.21"	"-0.00108"	"21/198"	"21"	"198"	"2596496.04376221"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"56.8896"	"17687"	"17687"	"17669"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"122.3"	""	"93.8"	""	"115.9"	""	"104.4"	""	"86.8"	"85.8"	""	"1466"	"71"	"38.000"	"31.000"	"5.4967245544069E-06"	"18"	"0"	"1.343E-06"	"1.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPMFVmGVNHEk.[Y]"	"N-Term(TMT6plex); M15(Oxidation); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.4706"	"0.0000"	"1"	"1"	"1"	"896.48126"	"2687.42923"	"2687.43010"	"-0.32"	"-0.00029"	"18/198"	"18"	"198"	"1308601.91571045"	"HCD"	"MS2"	"9.594374"	"40.5"	"100.000"	"56.3251"	"17457"	"17457"	"17429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"75.8"	""	"63.8"	""	"62.1"	""	"51.4"	"1.1"	"59.7"	"68.0"	""	"1446"	"51"	"38.000"	"31.000"	"0.000615372801620318"	"18"	"0"	"2.063E-05"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPMFVmGVNHEk.[Y]"	"N-Term(TMT6plex); M15(Oxidation); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.3951"	"0.0000"	"1"	"1"	"1"	"896.48145"	"2687.42978"	"2687.43010"	"-0.12"	"-0.00011"	"18/198"	"18"	"198"	"1064197.49200439"	"HCD"	"MS2"	"45.03759"	"29.8"	"100.000"	"56.1262"	"17322"	"17322"	"17291"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"68.9"	""	"38.8"	""	"51.9"	""	"26.4"	"4.5"	"47.5"	"43.0"	""	"1439"	"81"	"38.000"	"31.000"	"6.09580124474159E-07"	"23"	"0"	"2.509E-06"	"1.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPmFVMGVNHEk.[Y]"	"N-Term(TMT6plex); M12(Oxidation); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.3947"	"0.0000"	"1"	"1"	"1"	"896.48145"	"2687.42978"	"2687.43010"	"-0.12"	"-0.00011"	"20/198"	"20"	"198"	"2384997.9664917"	"HCD"	"MS2"	"1.848922"	"65.2"	"100.000"	"56.6869"	"17550"	"17550"	"17531"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"122.3"	""	"100.7"	""	"96.3"	""	"105.4"	"0.3"	"85.9"	"103.8"	""	"1439"	"76"	"38.000"	"31.000"	"1.7459459634118E-06"	"20"	"0"	"7.885E-07"	"1.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIISAPSADAPMFVMGVNHEK"	"[R].vIISAPSADAPmFVMGVNHEk.[Y]"	"N-Term(TMT6plex); M12(Oxidation); K21(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"4"	"4"	"0.5000"	"0.0000"	"1"	"1"	"1"	"672.61328"	"2687.43130"	"2687.43010"	"0.44"	"0.00030"	"11/198"	"11"	"198"	"8987539.24707031"	"HCD"	"MS2"	"41.53012"	"289.5"	"100.000"	"56.9730"	"17721"	"17721"	"17701"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"397.3"	""	"363.4"	""	"420.0"	""	"339.5"	""	"650.0"	"581.8"	""	"1443"	"20"	"38.000"	"31.000"	"0.682710111925419"	"14"	"0"	"2.431E-05"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAQYLGMPINGPFKPDHYR"	"[K].qAQYLGMPINGPFkPDHYR.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.36218"	"2690.42690"	"2690.42773"	"-0.31"	"-0.00021"	"13/180"	"13"	"180"	"2460514.9465332"	"HCD"	"MS2"	"19.68799"	"97.2"	"100.000"	"46.4843"	"13457"	"13457"	"13429"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"147.0"	""	"122.2"	""	"140.1"	""	"145.4"	"3.7"	"175.6"	"186.4"	""	"1476"	"22"	"38.000"	"31.000"	"0.487591764629606"	"14"	"0"	"1.174E-05"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAHDFLFTPVEASLLAPQTK"	"[R].fAHDFLFTPVEASLLAPQTk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q8VHT6"	"Arsenite methyltransferase OS=Rattus norvegicus OX=10116 GN=As3mt PE=1 SV=1"	"Q8VHT6"	"Arsenite methyltransferase OS=Rattus norvegicus OX=10116 GN=As3mt PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"897.50153"	"2690.49002"	"2690.49579"	"-2.14"	"-0.00192"	"11/186"	"11"	"186"	"176549.250549316"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"79.8077"	"27018"	"27018"	"26991"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.6"	""	"8.2"	""	"6.9"	""	"12.4"	""	"10.5"	"8.3"	""	"1071"	"25"	"37.000"	"30.000"	"0.183129991466091"	"16"	"0"	"0.0001347"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAHDFLFTPVEASLLAPQTK"	"[R].fAHDFLFTPVEASLLAPQTk.[V]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q8VHT6"	"Arsenite methyltransferase OS=Rattus norvegicus OX=10116 GN=As3mt PE=1 SV=1"	"Q8VHT6"	"Arsenite methyltransferase OS=Rattus norvegicus OX=10116 GN=As3mt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.50281"	"2690.49387"	"2690.49579"	"-0.72"	"-0.00064"	"7/186"	"7"	"186"	"125741.653015137"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"79.9029"	"27006"	"27006"	"26977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.6"	""	"7.5"	""	"6.4"	""	"11.1"	""	"7.4"	"7.7"	""	"1051"	"10"	"37.000"	"30.000"	"4.72685979094034"	"14"	"0.0002277"	"0.001303"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAQYLGMPINGPFKPDHYR"	"[K].qAQYLGMPInGPFkPDHYR.[Y]"	"N-Term(TMT6plex); N10(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"4"	"4"	"0.5714"	"0.0000"	"1"	"1"	"1"	"673.61029"	"2691.41933"	"2691.41175"	"2.82"	"0.00190"	"15/180"	"15"	"180"	"3065057.75384521"	"HCD"	"MS2"	"5.885795"	"89.9"	"100.000"	"48.2637"	"14137"	"14137"	"14112"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"145.8"	""	"112.2"	""	"124.0"	""	"131.4"	"2.3"	"165.6"	"169.9"	""	"1506"	"28"	"38.000"	"31.000"	"0.113971162007247"	"15"	"0"	"2.105E-05"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FRPSFPASSPYVTTVGGTSFK"	"[K].fRPSFPASSPYVTTVGGTSFk.[N]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.82257"	"2691.45316"	"2691.45466"	"-0.56"	"-0.00050"	"18/228"	"18"	"228"	"2630635.52258301"	"HCD"	"MS2"	"0"	"79.5"	"100.000"	"56.6731"	"17599"	"17599"	"17573"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"142.0"	""	"131.6"	""	"113.7"	""	"103.3"	""	"136.4"	"129.2"	""	"1377"	"35"	"38.000"	"31.000"	"0.0214735547864867"	"15"	"0"	"9.214E-06"	"1.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FRPSFPASSPYVTTVGGTSFK"	"[K].fRPSFPASSPYVTTVGGTSFk.[N]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"Q9EQV6"	"Tripeptidyl-peptidase 1 OS=Rattus norvegicus OX=10116 GN=Tpp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.82355"	"2691.45609"	"2691.45466"	"0.53"	"0.00048"	"18/228"	"18"	"228"	"3005756.50939941"	"HCD"	"MS2"	"0"	"84.7"	"100.000"	"56.5048"	"17476"	"17476"	"17451"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"143.6"	""	"133.3"	""	"120.7"	""	"133.7"	""	"134.4"	"139.6"	""	"1376"	"37"	"38.000"	"31.000"	"0.0130193240962774"	"15"	"0"	"7.431E-06"	"1.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAHDFLFTPVEASLLAPQTK"	"[R].fAHDFLFTPVEASLLAPqTk.[V]"	"N-Term(TMT6plex); Q18(Deamidated); K20(TMT6plex)"	"1"	"1"	"Q8VHT6"	"Arsenite methyltransferase OS=Rattus norvegicus OX=10116 GN=As3mt PE=1 SV=1"	"Q8VHT6"	"Arsenite methyltransferase OS=Rattus norvegicus OX=10116 GN=As3mt PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"897.83759"	"2691.49820"	"2691.47981"	"6.83"	"0.00613"	"10/186"	"10"	"186"	"209070.940124512"	"HCD"	"MS2"	"21.81882"	"7.6"	"100.000"	"79.8198"	"26972"	"26972"	"26945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.4"	""	"5.8"	""	"11.2"	""	"13.1"	""	"17.1"	"15.1"	""	"1052"	"15"	"37.000"	"30.000"	"1.76191820997018"	"19"	"0.000494"	"0.002695"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAIMGNPKVk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"898.13776"	"2692.39872"	"2692.40566"	"-2.58"	"-0.00231"	"15/186"	"15"	"186"	"571937.539367676"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"67.7275"	"22099"	"22099"	"22074"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.7"	""	"32.1"	""	"30.2"	""	"33.5"	""	"50.5"	"45.6"	""	"1585"	"35"	"38.000"	"32.000"	"0.0280542892808622"	"15"	"0"	"3.287E-05"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAIMGNPKVk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"0.3913"	"0.0000"	"1"	"1"	"1"	"898.13959"	"2692.40421"	"2692.40566"	"-0.54"	"-0.00048"	"12/186"	"12"	"186"	"424235.535217285"	"HCD"	"MS2"	"62.76149"	"20.9"	"100.000"	"67.8553"	"22100"	"22100"	"22074"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.9"	""	"23.4"	""	"28.0"	""	"35.0"	""	"40.1"	"41.2"	""	"1581"	"23"	"38.000"	"31.000"	"0.392556230106491"	"16"	"0.0001308"	"0.000255"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAQYLGMPINGPFKPDHYR"	"[K].qAqYLGMPInGPFkPDHYR.[Y]"	"N-Term(TMT6plex); Q3(Deamidated); N10(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.85736"	"2692.40761"	"2692.39576"	"4.40"	"0.00296"	"16/180"	"16"	"180"	"3327197.48535156"	"HCD"	"MS2"	"0"	"92.4"	"100.000"	"48.4696"	"14269"	"14269"	"14239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.2"	""	"129.4"	""	"136.6"	""	"137.4"	""	"168.3"	"157.0"	""	"1572"	"22"	"38.000"	"31.000"	"0.460704597308026"	"14"	"0"	"0.0001216"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAQYLGMPINGPFKPDHYR"	"[K].qAQYLGMPInGPFkPDHYR.[Y]"	"N-Term(TMT6plex); Q1(Deamidated); N10(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"2"	"2"	"673.85736"	"2692.40761"	"2692.39576"	"4.40"	"0.00296"	"16/180"	"16"	"180"	"3327197.48535156"	"HCD"	"MS2"	"0"	"92.4"	"100.000"	"48.4696"	"14269"	"14269"	"14239"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"151.2"	""	"129.4"	""	"136.6"	""	"137.4"	""	"168.3"	"157.0"	""	"1572"	"22"	"38.000"	"31.000"	"0.502831580689361"	"14"	"0.0001859"	"0.0003168"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAQYLGMPINGPFKPDHYR"	"[K].qAqYLGMPInGPFkPDHYR.[Y]"	"N-Term(TMT6plex); Q3(Deamidated); N10(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"4"	"4"	"0.2174"	"0.0000"	"1"	"1"	"1"	"673.85748"	"2692.40810"	"2692.39576"	"4.58"	"0.00308"	"11/180"	"11"	"180"	"2950156.93164063"	"HCD"	"MS2"	"0"	"79.6"	"100.000"	"48.5108"	"14286"	"14286"	"14255"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"135.6"	""	"95.8"	""	"121.3"	""	"108.0"	""	"144.5"	"149.1"	""	"1574"	"23"	"38.000"	"31.000"	"0.398084008996451"	"14"	"0"	"4.122E-05"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAIMGNPKVk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"4"	"4"	"0.2727"	"0.0000"	"1"	"1"	"1"	"673.85760"	"2692.40859"	"2692.40566"	"1.09"	"0.00073"	"14/186"	"14"	"186"	"725705.758361816"	"HCD"	"MS2"	"7.273229"	"24.3"	"100.000"	"67.9706"	"22147"	"22147"	"22122"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"36.6"	""	"28.9"	""	"32.3"	""	"42.8"	""	"48.7"	"42.6"	""	"1579"	"44"	"38.000"	"31.000"	"0.00286650124240995"	"19"	"0"	"1.846E-05"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIAGIINQPYYNYQAGPDAVLGR"	"[K].aIAGIINQPYYNYQAGPDAVLGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"898.47809"	"2693.41971"	"2693.42487"	"-1.91"	"-0.00172"	"19/208"	"19"	"208"	"310670.451049805"	"HCD"	"MS2"	"11.13181"	"6.2"	"100.000"	"70.2010"	"23109"	"23109"	"23082"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"11.7"	""	"10.9"	""	"9.5"	""	"8.0"	""	"10.4"	"8.5"	""	"1516"	"52"	"38.000"	"31.000"	"0.000499653812595196"	"19"	"0"	"4.258E-06"	"1.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAVHPELFSIDNGLLTPTLK"	"[K].gIAVHPELFSIDNGLLTPTLk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"898.52063"	"2693.54734"	"2693.56421"	"-6.26"	"-0.00562"	"12/200"	"12"	"200"	"169514.71673584"	"HCD"	"MS2"	"12.44107"	"6.7"	"100.000"	"78.6378"	"26541"	"26541"	"26511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.8"	""	"8.0"	""	"9.5"	""	"8.3"	""	"12.6"	"12.8"	""	"629"	"17"	"34.000"	"27.000"	"0.576262885835747"	"15"	"0.0001889"	"0.0004281"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAVHPELFSIDNGLLTPTLK"	"[K].gIAVHPELFSIDNGLLTPTLk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.52283"	"2693.55393"	"2693.56421"	"-3.82"	"-0.00343"	"17/200"	"17"	"200"	"549556.138793945"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"76.8992"	"25780"	"25780"	"25761"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.7"	""	"26.3"	""	"24.5"	""	"19.1"	""	"23.3"	"22.3"	""	"582"	"30"	"34.000"	"27.000"	"0.029436962118963"	"14"	"0"	"6.071E-05"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAVHPELFSIDNGLLTPTLK"	"[K].gIAVHPELFSIDNGLLTPTLk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"674.14545"	"2693.55996"	"2693.56421"	"-1.58"	"-0.00106"	"18/200"	"18"	"200"	"775210.190124512"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"76.8189"	"25748"	"25748"	"25736"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.2"	""	"24.2"	""	"29.2"	""	"25.5"	"0.9"	"37.2"	"34.0"	""	"538"	"24"	"34.000"	"27.000"	"0.102979855952225"	"14"	"0"	"4.477E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAVHPELFSIDNGLLTPTLK"	"[K].gIAVHPELFSIDNGLLTPTLk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.52496"	"2693.56034"	"2693.56421"	"-1.44"	"-0.00129"	"15/200"	"15"	"200"	"487966.515075684"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"76.8679"	"25818"	"25818"	"25799"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.1"	""	"26.3"	""	"18.3"	""	"18.6"	"1.4"	"22.6"	"22.6"	""	"534"	"36"	"34.000"	"27.000"	"0.00649398470422709"	"15"	"0"	"0.0001025"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFHLLGVDTLVVTNAAGGLNPK"	"[R].vFHLLGVDTLVVTNAAGGLNPk.[F]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"898.52777"	"2693.56876"	"2693.57544"	"-2.48"	"-0.00223"	"14/194"	"14"	"194"	"238290.254516602"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"77.2802"	"25987"	"25987"	"25957"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.0"	""	"8.4"	""	"8.0"	""	"10.1"	""	"15.2"	"12.6"	""	"481"	"36"	"33.000"	"26.000"	"0.00665449465721469"	"16"	"0"	"2.189E-05"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFHLLGVDTLVVTNAAGGLNPK"	"[R].vFHLLGVDTLVVTNAAGGLNPk.[F]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.53052"	"2693.57700"	"2693.57544"	"0.58"	"0.00052"	"20/194"	"20"	"194"	"247279.222351074"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"77.3737"	"25974"	"25974"	"25945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.8"	""	"10.1"	""	"8.5"	""	"10.5"	""	"15.5"	"12.2"	""	"411"	"63"	"33.000"	"26.000"	"9.20050840082425E-06"	"17"	"0"	"5.86E-07"	"1.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALQQYTLEPSEKPFDLK"	"[K].aLQQYTLEPSEkPFDLk.[S]"	"N-Term(TMT6plex); K12(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.84766"	"2694.52842"	"2694.53213"	"-1.38"	"-0.00124"	"7/174"	"7"	"174"	"591741.444396973"	"HCD"	"MS2"	"100"	"49.8"	"100.000"	"58.4587"	"18275"	"18275"	"18250"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.5"	""	"67.9"	""	"72.1"	""	"83.0"	""	"84.9"	"89.1"	""	"803"	"17"	"36.000"	"29.000"	"0.846614202198215"	"14"	"0"	"0.0001253"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STEAPLIIRPDSGNPLDTVLK"	"[R].sTEAPLIIRPDSGNPLDTVLk.[V]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.85315"	"2694.54489"	"2694.54420"	"0.26"	"0.00023"	"9/218"	"9"	"218"	"535341.851379395"	"HCD"	"MS2"	"0"	"40.3"	"100.000"	"65.4410"	"21122"	"21122"	"21097"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"66.4"	""	"47.0"	""	"56.3"	""	"61.5"	""	"74.1"	"76.6"	""	"688"	"20"	"35.000"	"28.000"	"0.349589550347519"	"14"	"0.0001308"	"0.0002616"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAVHPELFSIDNGLLTPTLK"	"[K].gIAVHPELFSIDnGLLTPTLk.[A]"	"N-Term(TMT6plex); N13(Deamidated); K21(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"898.85498"	"2694.55039"	"2694.54822"	"0.80"	"0.00072"	"9/200"	"9"	"200"	"100601.527587891"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"78.7024"	"26567"	"26567"	"26543"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.7"	""	"7.7"	""	"6.4"	""	"15.0"	""	"8.5"	"8.2"	""	"643"	"13"	"35.000"	"28.000"	"1.76271044222054"	"14"	"0.0003571"	"0.001488"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAVHPELFSIDNGLLTPTLK"	"[K].gIAVHPELFSIDnGLLTPTLk.[A]"	"N-Term(TMT6plex); N13(Deamidated); K21(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.85913"	"2694.56284"	"2694.54822"	"5.42"	"0.00487"	"10/200"	"10"	"200"	"172920.68927002"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"77.0164"	"25828"	"25828"	"25801"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"16.1"	""	"9.6"	""	"6.8"	""	"12.4"	""	"12.7"	"12.9"	""	"524"	"19"	"34.000"	"27.000"	"0.30429953682617"	"14"	"0.0001889"	"0.0008418"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAVHPELFSIDNGLLTPTLK"	"[K].gIAVHPELFSIDnGLLTPTLk.[A]"	"N-Term(TMT6plex); N13(Deamidated); K21(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.86426"	"2694.57822"	"2694.54822"	"11.13"	"0.01000"	"23/200"	"23"	"200"	"582652.103088379"	"HCD"	"MS2"	"34.52103"	"17.9"	"100.000"	"76.7993"	"25790"	"25790"	"25774"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.6"	""	"25.5"	""	"25.6"	""	"24.1"	""	"24.6"	"27.1"	""	"416"	"44"	"33.000"	"26.000"	"0.000847350977832554"	"15"	"0"	"0.0001342"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVDGLMIHSGDPVNYYVDTAVR"	"[K].fVDGLMIHSGDPVNYYVDTAVR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"899.78949"	"2697.35392"	"2697.35440"	"-0.18"	"-0.00016"	"8/216"	"8"	"216"	"237619.300537109"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"69.4719"	"22760"	"22760"	"22730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.8"	""	"12.2"	""	"14.2"	""	"12.8"	""	"20.1"	"15.7"	""	"1331"	"27"	"38.000"	"31.000"	"0.142938118053387"	"14"	"0"	"4.49E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVDGLMIHSGDPVNYYVDTAVR"	"[K].fVDGLMIHSGDPVNYYVDTAVR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"899.78986"	"2697.35501"	"2697.35440"	"0.23"	"0.00020"	"13/216"	"13"	"216"	"209828.822692871"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"69.2582"	"22724"	"22724"	"22698"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.6"	""	"9.0"	""	"11.0"	""	"13.4"	""	"11.8"	"10.7"	""	"1346"	"26"	"38.000"	"31.000"	"0.155960659942879"	"14"	"0"	"6.37E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELGDSTPPFLFHPNVQMK"	"[K].aLELGDSTPPFLFHPNVQMk.[S]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.49194"	"2699.46128"	"2699.46311"	"-0.68"	"-0.00061"	"11/170"	"11"	"170"	"152289.151000977"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"70.5196"	"23239"	"23239"	"23210"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.1"	""	"11.6"	""	"8.9"	""	"12.6"	""	"15.2"	"15.4"	""	"1328"	"21"	"38.000"	"31.000"	"0.5286498086771"	"14"	"0.0001889"	"0.0005288"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEPLAANPFAASFAHLLNPAPPAR"	"[R].tEPLAANPFAASFAHLLNPAPPAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA9"	"CCR4-NOT transcription complex subunit 11 OS=Rattus norvegicus OX=10116 GN=Cnot11 PE=2 SV=1"	"B0BNA9"	"CCR4-NOT transcription complex subunit 11 OS=Rattus norvegicus OX=10116 GN=Cnot11 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"901.49915"	"2702.48288"	"2702.46159"	"7.88"	"0.00710"	"11/240"	"11"	"240"	"190858.101074219"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"78.4054"	"26395"	"26395"	"26369"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.0"	""	"8.3"	""	"10.4"	""	"5.4"	""	"8.8"	"8.3"	""	"1295"	"8"	"38.000"	"31.000"	"10.381013904718"	"13"	"0.001125"	"0.01514"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAImGNPKVk.[A]"	"N-Term(TMT6plex); M15(Oxidation); K21(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"903.47247"	"2708.40287"	"2708.40057"	"0.85"	"0.00076"	"6/186"	"6"	"186"	"180968.494506836"	"HCD"	"MS2"	"9.706102"	"6.2"	"100.000"	"80.7198"	"27339"	"27339"	"27312"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"11.4"	""	"9.5"	""	"8.6"	""	"14.4"	"9.1"	""	"1439"	"18"	"38.000"	"31.000"	"1.17227849548428"	"18"	"0.0004166"	"0.002169"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADKFDENAK"	"[K].iTLPVDFVTADkFDENAk.[T]"	"N-Term(TMT6plex); K12(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"1"	"4"	"4"	"0.9333"	"0.0000"	"1"	"1"	"1"	"678.38501"	"2710.51821"	"2710.52704"	"-3.26"	"-0.00221"	"13/174"	"13"	"174"	"5241179.71307373"	"HCD"	"MS2"	"14.33222"	"149.0"	"100.000"	"72.1964"	"23923"	"23923"	"23903"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"315.3"	""	"199.6"	""	"209.7"	""	"227.7"	"0.7"	"226.1"	"227.2"	""	"964"	"15"	"36.000"	"29.000"	"1.44227155484515"	"14"	"7.476E-05"	"0.000193"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADKFDENAK"	"[K].iTLPVDFVTADkFDENAk.[T]"	"N-Term(TMT6plex); K12(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"1"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"904.17871"	"2710.52158"	"2710.52704"	"-2.02"	"-0.00182"	"15/174"	"15"	"174"	"1264194.01068115"	"HCD"	"MS2"	"0"	"97.2"	"100.000"	"72.0899"	"23880"	"23880"	"23855"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"227.1"	""	"134.1"	""	"131.6"	""	"132.3"	"0.3"	"150.3"	"141.0"	""	"922"	"20"	"36.000"	"29.000"	"0.423351326978931"	"16"	"0"	"0.000107"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLPVDFVTADKFDENAK"	"[K].iTLPVDFVTADkFDENAk.[T]"	"N-Term(TMT6plex); K12(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"1"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"904.17975"	"2710.52469"	"2710.52704"	"-0.87"	"-0.00078"	"12/174"	"12"	"174"	"1016884.96313477"	"HCD"	"MS2"	"70.69052"	"81.9"	"100.000"	"72.1444"	"23851"	"23851"	"23825"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"174.9"	""	"120.4"	""	"111.9"	""	"115.9"	"0.1"	"124.0"	"125.8"	""	"906"	"17"	"36.000"	"29.000"	"0.957410535046001"	"16"	"0.0001889"	"0.0006462"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGQSVTTIPTVGFNVETVTYK"	"[K].lGQSVTTIPTVGFNVETVTYk.[N]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"3"	"3"	"0.9804"	"0.0000"	"1"	"1"	"1"	"904.84473"	"2712.51963"	"2712.52240"	"-1.02"	"-0.00093"	"14/226"	"14"	"226"	"571140.113708496"	"HCD"	"MS2"	"9.496875"	"19.7"	"100.000"	"74.3585"	"24806"	"24806"	"24783"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.2"	""	"31.5"	""	"26.2"	""	"35.2"	""	"39.3"	"38.7"	""	"952"	"51"	"36.000"	"29.000"	"0.000378971850798644"	"17"	"0"	"5.251E-06"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGQSVTTIPTVGFNVETVTYK"	"[K].lGQSVTTIPTVGFNVETVTYk.[N]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"P62332"	"ADP-ribosylation factor 6 OS=Rattus norvegicus OX=10116 GN=Arf6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"904.84576"	"2712.52274"	"2712.52240"	"0.12"	"0.00011"	"11/226"	"11"	"226"	"138957.360717773"	"HCD"	"MS2"	"7.206917"	"9.9"	"100.000"	"74.5087"	"24816"	"24816"	"24785"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.5"	""	"11.5"	""	"13.9"	""	"14.9"	""	"20.6"	"22.3"	""	"924"	"29"	"36.000"	"29.000"	"0.0549088029075902"	"14"	"0"	"0.0001795"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FLSAVGPPSLTYLPPVMQLSEPK"	"[].FLSAVGPPSLTYLPPVmqLSEPk.[]"	"M17(Oxidation); Q18(Deamidated); K23(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"3"	"3"	"5"	"906.49487"	"2717.47007"	"2717.46731"	"1.01"	"0.00092"	"3/222"	"3"	"222"	"107315.176452637"	"HCD"	"MS2"	"4.882676"	"4.0"	"100.000"	"82.0354"	"27926"	"27926"	"27902"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.4"	""	"6.5"	""	"7.1"	""	"3.0"	""	"7.3"	"7.8"	""	"1388"	"1"	"38.000"	"31.000"	"61.5686272354345"	"13"	"0.008737"	"0.3887"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINPDEAVAYGAAVQAAILSGDK"	"[K].sINPDEAVAYGAAVQAAILSGDk.[S]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"4"	"4"	"0.9455"	"0.0000"	"1"	"1"	"1"	"680.37231"	"2718.46743"	"2718.47143"	"-1.47"	"-0.00100"	"14/258"	"14"	"258"	"240150.366882324"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"87.2817"	"30004"	"30004"	"29981"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"7.9"	""	"5.6"	""	"10.6"	""	"10.5"	"12.8"	""	"1379"	"55"	"38.000"	"31.000"	"0.000221072269924652"	"19"	"0"	"2.603E-06"	"1.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINPDEAVAYGAAVQAAILSGDK"	"[K].sINPDEAVAYGAAVQAAILSGDk.[S]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.37274"	"2718.46914"	"2718.47143"	"-0.84"	"-0.00057"	"17/258"	"17"	"258"	"228288.426269531"	"HCD"	"MS2"	"12.05413"	"5.9"	"100.000"	"87.3818"	"30096"	"30096"	"30075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.8"	""	"5.9"	""	"8.1"	""	"12.2"	""	"12.2"	"9.8"	""	"1360"	"28"	"38.000"	"31.000"	"0.111817277178615"	"14"	"0"	"1.251E-05"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINPDEAVAYGAAVQAAILSGDK"	"[K].sINPDEAVAYGAAVQAAILSGDk.[S]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"3"	"1359.73828"	"2718.46929"	"2718.47143"	"-0.79"	"-0.00107"	"5/258"	"5"	"258"	"77691.0272827148"	"HCD"	"MS2"	"15.2669"	"3.2"	"100.000"	"87.3706"	"30091"	"30091"	"30075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"6.0"	""	"1.9"	""	""	""	"6.1"	""	"6.8"	"10.0"	""	"1358"	"0"	"38.000"	"31.000"	"66.6606853310569"	"13"	"0.001058"	"0.01372"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINPDEAVAYGAAVQAAILSGDK"	"[K].sINPDEAVAYGAAVQAAILSGDk.[S]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"906.82855"	"2718.47110"	"2718.47143"	"-0.12"	"-0.00011"	"19/258"	"19"	"258"	"593266.106323242"	"HCD"	"MS2"	"0.7569793"	"13.9"	"100.000"	"87.4906"	"30140"	"30140"	"30125"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.7"	""	"8.3"	""	"15.3"	""	"27.9"	""	"29.3"	"36.5"	""	"1355"	"66"	"38.000"	"31.000"	"1.74948127915494E-05"	"27"	"0"	"5.827E-07"	"1.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINPDEAVAYGAAVQAAILSGDK"	"[K].sINPDEAVAYGAAVQAAILSGDk.[S]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9589"	"0.0000"	"1"	"1"	"1"	"906.82855"	"2718.47110"	"2718.47143"	"-0.12"	"-0.00011"	"21/258"	"21"	"258"	"675164.594177246"	"HCD"	"MS2"	"5.394986"	"14.9"	"100.000"	"87.1989"	"29970"	"29970"	"29951"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"21.7"	""	"14.1"	""	"12.0"	""	"26.8"	""	"36.0"	"32.7"	""	"1355"	"73"	"38.000"	"31.000"	"3.4427802233478E-06"	"21"	"0"	"3.587E-07"	"1.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINPDEAVAYGAAVQAAILSGDK"	"[K].sINPDEAVAYGAAVQAAILSGDk.[S]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"906.82892"	"2718.47220"	"2718.47143"	"0.28"	"0.00026"	"15/258"	"15"	"258"	"310844.609313965"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"87.5157"	"30096"	"30096"	"30088"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.8"	""	"5.3"	""	"6.0"	""	"13.9"	""	"18.1"	"19.4"	""	"1343"	"50"	"38.000"	"31.000"	"0.000641277521513394"	"17"	"0"	"3.39E-06"	"1.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINPDEAVAYGAAVQAAILSGDK"	"[K].sINPDEAVAYGAAVQAAILSGDk.[S]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"906.82941"	"2718.47367"	"2718.47143"	"0.82"	"0.00075"	"7/258"	"7"	"258"	"89568.1250610352"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"87.7610"	"30239"	"30239"	"30232"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.0"	""	""	""	""	""	"3.8"	""	"5.7"	"5.7"	""	"1337"	"29"	"38.000"	"31.000"	"0.0822434673288077"	"19"	"0.0001308"	"0.0002985"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINPDEAVAYGAAVQAAILSGDK"	"[K].sINPDEAVAYGAAVQAAILSGDk.[S]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1359.74097"	"2718.47466"	"2718.47143"	"1.19"	"0.00161"	"6/258"	"6"	"258"	"72036.3114624023"	"HCD"	"MS2"	"16.34722"	"2.0"	"100.000"	"87.3186"	"30019"	"30019"	"29997"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.9"	""	""	""	""	""	"5.7"	""	"6.8"	"3.7"	""	"1332"	"20"	"38.000"	"31.000"	"0.601830549499052"	"14"	"0.0001889"	"0.0008843"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINPDEAVAYGAAVQAAILSGDK"	"[K].sINPDEAVAYGAAVqAAILSGDk.[S]"	"N-Term(TMT6plex); Q15(Deamidated); K23(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"4"	"4"	"0.2333"	"0.0000"	"1"	"1"	"1"	"680.62488"	"2719.47768"	"2719.45545"	"8.18"	"0.00556"	"13/258"	"13"	"258"	"225303.399963379"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"87.3473"	"30082"	"30082"	"30059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"6.9"	""	"9.2"	""	"11.9"	""	"11.6"	"13.4"	""	"1318"	"30"	"38.000"	"31.000"	"0.0711025889949457"	"16"	"0"	"0.0001461"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGGKPAEMGDYPWQVAIK"	"[R].vVGGkPAEMGDYPWQVAIk.[D]"	"N-Term(TMT6plex); K5(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9WUW3"	"Complement factor I OS=Rattus norvegicus OX=10116 GN=Cfi PE=2 SV=1"	"Q9WUW3"	"Complement factor I OS=Rattus norvegicus OX=10116 GN=Cfi PE=2 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"911.51855"	"2732.54111"	"2732.54125"	"-0.05"	"-0.00005"	"15/178"	"15"	"178"	"718801.104431152"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"61.8536"	"19710"	"19710"	"19683"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"129.9"	""	"93.5"	""	"60.1"	""	"37.6"	"0.7"	"54.9"	"62.8"	""	"886"	"24"	"36.000"	"29.000"	"0.176768031746429"	"16"	"0"	"2.043E-05"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGGKPAEMGDYPWQVAIK"	"[R].vVGGkPAEMGDYPWQVAIk.[D]"	"N-Term(TMT6plex); K5(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q9WUW3"	"Complement factor I OS=Rattus norvegicus OX=10116 GN=Cfi PE=2 SV=1"	"Q9WUW3"	"Complement factor I OS=Rattus norvegicus OX=10116 GN=Cfi PE=2 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"911.51990"	"2732.54514"	"2732.54125"	"1.42"	"0.00129"	"23/178"	"23"	"178"	"690416.462219238"	"HCD"	"MS2"	"0"	"45.4"	"100.000"	"61.6762"	"19584"	"19584"	"19561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"127.3"	""	"90.3"	""	"70.9"	""	"32.2"	""	"51.8"	"55.7"	""	"853"	"28"	"36.000"	"29.000"	"0.0641090048537395"	"16"	"0"	"1.918E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVPTSYLLIPAASYVLPEVSK"	"[R].aGVPTSYLLIPAASYVLPEVSk.[V]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q63186"	"Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1"	"Q63186"	"Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"911.86554"	"2733.58207"	"2733.58428"	"-0.81"	"-0.00074"	"3/200"	"3"	"200"	"66843.085144043"	"HCD"	"MS2"	"0"	"1.1"	"100.000"	"90.8999"	"31363"	"31363"	"31351"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	"2.4"	""	"2.4"	""	"1.9"	"3.8"	""	"574"	"2"	"34.000"	"27.000"	"17.9011897783455"	"13"	"0.0006037"	"0.003899"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVPTSYLLIPAASYVLPEVSK"	"[R].aGVPTSYLLIPAASYVLPEVSk.[V]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q63186"	"Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1"	"Q63186"	"Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"911.86658"	"2733.58518"	"2733.58428"	"0.33"	"0.00030"	"5/200"	"5"	"200"	"56117.7318115234"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"91.0700"	"31452"	"31452"	"31441"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.0"	""	"2.5"	""	"3.1"	""	"3.1"	""	"3.9"	"2.6"	""	"553"	"11"	"34.000"	"27.000"	"2.02625983412907"	"18"	"0.0008125"	"0.007459"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASEPLETLGSEGALSPGGVASLLR"	"[R].vTASEPLETLGSEGALSPGGVASLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.9884"	"0.0000"	"1"	"1"	"1"	"914.16949"	"2740.49393"	"2740.49300"	"0.34"	"0.00031"	"26/242"	"26"	"242"	"628182.254150391"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"81.6798"	"27781"	"27781"	"27758"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.0"	""	"13.5"	""	"11.1"	""	"15.1"	""	"16.8"	"15.6"	""	"1204"	"86"	"37.000"	"30.000"	"1.50174602561966E-07"	"19"	"0"	"3.044E-08"	"1.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASEPLETLGSEGALSPGGVASLLR"	"[R].vTASEPLETLGSEGALSPGGVASLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.9873"	"0.0000"	"1"	"1"	"1"	"914.17078"	"2740.49778"	"2740.49300"	"1.74"	"0.00159"	"20/242"	"20"	"242"	"592742.620117188"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"81.6178"	"27705"	"27705"	"27680"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.5"	""	"13.2"	""	"15.7"	""	"9.8"	""	"19.7"	"16.0"	""	"1188"	"79"	"37.000"	"30.000"	"7.20752977176197E-07"	"19"	"0"	"1.325E-07"	"1.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPWGVVEVENPEHNDFLK"	"[R].lYPWGVVEVENPEHNDFLk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.15045"	"2743.43680"	"2743.44957"	"-4.66"	"-0.00426"	"17/176"	"17"	"176"	"1979156.18762207"	"HCD"	"MS2"	"0"	"74.7"	"100.000"	"72.1673"	"23860"	"23860"	"23841"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.7"	""	"77.8"	""	"84.5"	""	"138.7"	""	"153.2"	"155.1"	""	"1594"	"53"	"39.000"	"32.000"	"0.000393059521752084"	"16"	"0"	"1.603E-06"	"1.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPWGVVEVENPEHNDFLK"	"[R].lYPWGVVEVENPEHNDFLk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"915.15198"	"2743.44138"	"2743.44957"	"-2.99"	"-0.00273"	"11/176"	"11"	"176"	"203148.692077637"	"HCD"	"MS2"	"14.4186"	"11.9"	"100.000"	"72.3734"	"23996"	"23996"	"23967"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.9"	""	"13.9"	""	"14.0"	""	"22.9"	"1.3"	"23.8"	"22.7"	""	"1585"	"33"	"38.000"	"32.000"	"0.0391741219437067"	"16"	"0.0001889"	"0.000398"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPWGVVEVENPEHNDFLK"	"[R].lYPWGVVEVENPEHNDFLk.[L]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"915.16840"	"2743.49063"	"2743.44957"	"14.97"	"0.01369"	"19/176"	"19"	"176"	"1950365.3326416"	"HCD"	"MS2"	"29.32068"	"72.6"	"100.000"	"72.0531"	"23865"	"23865"	"23839"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"104.6"	""	"79.2"	""	"77.1"	""	"126.5"	"0.4"	"155.0"	"146.7"	""	"1287"	"58"	"38.000"	"31.000"	"9.13163515206932E-05"	"22"	"0"	"2.235E-05"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADHVEDLPGALSTLSDLHAHK"	"[K].aADHVEDLPGALSTLSDLHAHk.[L]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.62494"	"2755.47793"	"2755.47791"	"0.00"	"0.00000"	"13/196"	"13"	"196"	"26313586.1282959"	"HCD"	"MS2"	"1.985785"	"128.5"	"33.885"	"49.1432"	"14544"	"14544"	"14527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"140.4"	""	"110.4"	""	"120.8"	""	"283.3"	""	"298.0"	"269.8"	""	"1402"	"56"	"38.000"	"31.000"	"0.000163575410165898"	"16"	"0"	"3.963E-07"	"1.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADHVEDLPGALSTLSDLHAHK"	"[K].aADHVEDLPGALSTLSDLHAHk.[L]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"5"	"5"	"0.9804"	"0.0000"	"1"	"1"	"1"	"551.90173"	"2755.47956"	"2755.47791"	"0.60"	"0.00033"	"14/196"	"14"	"196"	"64469460.5593262"	"HCD"	"MS2"	"7.858289"	"284.2"	"47.887"	"48.9498"	"14465"	"14465"	"14447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"290.8"	""	"205.0"	""	"252.5"	""	"704.5"	"8.1"	"662.5"	"581.9"	""	"1406"	"51"	"38.000"	"31.000"	"0.000602497605196949"	"17"	"0"	"4.217E-07"	"1.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADHVEDLPGALSTLSDLHAHK"	"[K].aADHVEDLPGALSTLSDLHAHk.[L]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"5"	"5"	"0.9846"	"0.0000"	"1"	"1"	"1"	"551.90186"	"2755.48017"	"2755.47791"	"0.82"	"0.00045"	"16/196"	"16"	"196"	"100804525.813965"	"HCD"	"MS2"	"8.351146"	"270.6"	"27.445"	"48.6773"	"14306"	"14306"	"14287"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"265.6"	""	"193.2"	""	"194.2"	""	"701.6"	"2.4"	"647.6"	"572.5"	""	"1390"	"65"	"38.000"	"31.000"	"2.3712907357724E-05"	"17"	"0"	"3.553E-07"	"1.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADHVEDLPGALSTLSDLHAHK"	"[K].aADHVEDLPGALSTLSDLHAHk.[L]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"5"	"5"	"0.9804"	"0.0000"	"1"	"1"	"1"	"551.90216"	"2755.48170"	"2755.47791"	"1.37"	"0.00076"	"15/196"	"15"	"196"	"27925344.8441162"	"HCD"	"MS2"	"1.258695"	"123.1"	"43.201"	"49.3779"	"14640"	"14640"	"14622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"119.8"	""	"85.9"	""	"91.1"	""	"297.6"	""	"317.5"	"262.6"	""	"1379"	"51"	"38.000"	"31.000"	"0.00059092759428634"	"17"	"0"	"5.804E-07"	"1.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADHVEDLPGALSTLSDLHAHK"	"[K].aADHVEDLPGALSTLSDLHAHk.[L]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"5"	"5"	"0.9762"	"0.0000"	"1"	"1"	"1"	"551.90259"	"2755.48383"	"2755.47791"	"2.15"	"0.00118"	"14/196"	"14"	"196"	"82334298.1367188"	"HCD"	"MS2"	"0.8686317"	"100.3"	"13.863"	"48.9832"	"14432"	"14432"	"14415"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"94.6"	""	"57.1"	""	"65.8"	""	"259.0"	"0.5"	"248.4"	"231.3"	""	"1352"	"42"	"38.000"	"31.000"	"0.00449724653592377"	"16"	"0"	"9.671E-07"	"1.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGSEPTTPFNLFIGNLNPNK"	"[K].iEGSEPTTPFNLFIGNLNPNk.[S]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"920.83551"	"2760.49198"	"2760.49725"	"-1.91"	"-0.00176"	"11/192"	"11"	"192"	"249471.059692383"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"84.8706"	"29082"	"29082"	"29058"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.8"	""	"6.5"	""	"11.8"	""	"10.8"	""	"13.7"	"10.8"	""	"1305"	"34"	"38.000"	"31.000"	"0.0241869170963131"	"19"	"0.0001889"	"0.000723"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGSEPTTPFNLFIGNLNPNK"	"[K].iEGSEPTTPFNLFIGNLNPNk.[S]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"920.83746"	"2760.49784"	"2760.49725"	"0.21"	"0.00020"	"10/192"	"10"	"192"	"220390.58013916"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"84.7838"	"28996"	"28996"	"28971"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.9"	""	"6.6"	""	"6.1"	""	"14.0"	""	"10.2"	"11.2"	""	"1273"	"31"	"38.000"	"31.000"	"0.0524563910205775"	"20"	"0.0001889"	"0.0009315"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQHVPGSPFQFTVGPLGEGGAHK"	"[R].gQHVPGSPFQFTVGPLGEGGAHk.[V]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"4"	"4"	"0.9851"	"0.0000"	"1"	"1"	"1"	"691.37506"	"2762.47841"	"2762.47785"	"0.20"	"0.00014"	"18/240"	"18"	"240"	"11628287.5458984"	"HCD"	"MS2"	"4.4166"	"134.8"	"72.880"	"47.2185"	"13709"	"13709"	"13688"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"181.2"	""	"140.2"	""	"165.8"	""	"265.3"	"0.5"	"250.8"	"274.8"	""	"1442"	"67"	"38.000"	"31.000"	"1.59931961867596E-05"	"18"	"0"	"3.135E-07"	"1.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQHVPGSPFQFTVGPLGEGGAHK"	"[R].gQHVPGSPFQFTVGPLGEGGAHk.[V]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"4"	"4"	"0.9833"	"0.0000"	"1"	"1"	"1"	"691.37561"	"2762.48061"	"2762.47785"	"1.00"	"0.00069"	"21/240"	"21"	"240"	"11410514.8703003"	"HCD"	"MS2"	"6.862832"	"169.1"	"100.000"	"47.4384"	"13847"	"13847"	"13826"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.6"	""	"174.9"	""	"220.9"	""	"331.5"	"4.5"	"345.6"	"334.4"	""	"1439"	"60"	"38.000"	"31.000"	"7.94384567019542E-05"	"17"	"0"	"1.97E-07"	"1.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGANPGFHEAIGDVLALSVSTPK"	"[R].eGANPGFHEAIGDVLALSVSTPk.[H]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"923.17316"	"2767.50492"	"2767.50306"	"0.67"	"0.00062"	"19/254"	"19"	"254"	"426513.163391113"	"HCD"	"MS2"	"18.79531"	"13.1"	"100.000"	"68.6117"	"22409"	"22409"	"22378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.1"	""	"13.2"	""	"12.3"	""	"24.7"	""	"30.1"	"32.5"	""	"1142"	"28"	"37.000"	"30.000"	"0.087425094062044"	"15"	"0"	"3.476E-05"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGANPGFHEAIGDVLALSVSTPK"	"[R].eGANPGFHEAIGDVLALSVSTPk.[H]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"923.17352"	"2767.50602"	"2767.50306"	"1.07"	"0.00098"	"25/254"	"25"	"254"	"911360.330444336"	"HCD"	"MS2"	"16.5234"	"30.9"	"100.000"	"68.3870"	"22368"	"22368"	"22346"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"41.3"	""	"26.7"	""	"33.9"	""	"58.8"	""	"63.2"	"71.8"	""	"1142"	"31"	"37.000"	"30.000"	"0.045460698908829"	"14"	"0"	"9.707E-07"	"1.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTGIDINPNALFPPVEFPVPR"	"[K].vHLTGIDINPNALFPPVEFPVPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"924.51794"	"2771.53928"	"2771.54459"	"-1.91"	"-0.00177"	"7/232"	"7"	"232"	"111576.572387695"	"HCD"	"MS2"	"20.46494"	"2.5"	"100.000"	"86.6011"	"29728"	"29728"	"29700"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"2.7"	""	"4.1"	""	"2.9"	""	"5.3"	""	"2.8"	"6.4"	""	"1052"	"5"	"37.000"	"30.000"	"18.1128063581516"	"13"	"0.0003839"	"0.001662"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTGIDINPNALFPPVEFPVPR"	"[K].vHLTGIDINPNALFPPVEFPVPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"924.52106"	"2771.54862"	"2771.54459"	"1.45"	"0.00134"	"11/232"	"11"	"232"	"188242.235046387"	"HCD"	"MS2"	"58.9174"	"3.9"	"100.000"	"86.2387"	"29581"	"29581"	"29553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.4"	""	"4.4"	""	"6.2"	""	"9.2"	""	"7.5"	"6.4"	""	"985"	"20"	"36.000"	"29.000"	"0.468172860875719"	"14"	"0"	"0.0001298"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTGIDINPNALFPPVEFPVPR"	"[K].vHLTGIDINPNALFPPVEFPVPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"924.52106"	"2771.54862"	"2771.54459"	"1.45"	"0.00134"	"9/232"	"9"	"232"	"142536.981384277"	"HCD"	"MS2"	"7.597445"	"1.7"	"100.000"	"86.2860"	"29653"	"29653"	"29622"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.5"	""	""	""	"2.9"	""	"4.2"	""	"4.1"	"2.0"	""	"985"	"26"	"36.000"	"29.000"	"0.125142905748303"	"14"	"0.0001889"	"0.0003904"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLPSDVTEGEVISLGLPFGK"	"[R].kLPSDVTEGEVISLGLPFGk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"1"	"4"	"4"	"0.9756"	"0.0000"	"1"	"1"	"1"	"694.16235"	"2773.62758"	"2773.63184"	"-1.54"	"-0.00106"	"18/208"	"18"	"208"	"2427766.65704346"	"HCD"	"MS2"	"18.14977"	"41.8"	"100.000"	"73.5630"	"24481"	"24481"	"24463"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.4"	""	"45.8"	""	"52.5"	""	"82.0"	"0.1"	"81.3"	"79.4"	""	"399"	"41"	"32.000"	"26.000"	"0.00152736523078796"	"16"	"0"	"1.914E-05"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLPSDVTEGEVISLGLPFGK"	"[R].kLPSDVTEGEVISLGLPFGk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"1"	"4"	"4"	"0.8750"	"0.0000"	"1"	"1"	"1"	"694.16284"	"2773.62954"	"2773.63184"	"-0.83"	"-0.00058"	"13/208"	"13"	"208"	"1167754.91699219"	"HCD"	"MS2"	"16.24907"	"25.4"	"100.000"	"73.7936"	"24524"	"24524"	"24497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"41.6"	""	"32.4"	""	"28.9"	""	"44.5"	""	"49.6"	"45.6"	""	"386"	"32"	"32.000"	"25.000"	"0.0126344781594984"	"18"	"0.0001308"	"0.000234"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLPSDVTEGEVISLGLPFGK"	"[R].kLPSDVTEGEVISLGLPFGk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"925.21472"	"2773.62961"	"2773.63184"	"-0.80"	"-0.00074"	"22/208"	"22"	"208"	"859044.206970215"	"HCD"	"MS2"	"5.603717"	"27.6"	"100.000"	"73.5423"	"24473"	"24473"	"24447"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.7"	""	"33.8"	""	"35.6"	""	"52.6"	""	"49.7"	"48.4"	""	"386"	"50"	"32.000"	"25.000"	"0.000184313569102137"	"16"	"0"	"4.746E-06"	"1.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLPSDVTEGEVISLGLPFGK"	"[R].kLPSDVTEGEVISLGLPFGk.[V]"	"N-Term(TMT6plex); K1(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"925.21631"	"2773.63437"	"2773.63184"	"0.91"	"0.00084"	"19/208"	"19"	"208"	"846713.369689941"	"HCD"	"MS2"	"7.455587"	"28.2"	"100.000"	"73.5560"	"24427"	"24427"	"24401"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"45.4"	""	"38.8"	""	"33.3"	""	"53.2"	""	"50.5"	"47.5"	""	"368"	"55"	"32.000"	"25.000"	"5.27008746462811E-05"	"16"	"0"	"3.622E-06"	"1.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTIPDHDNWPVGAGDSSFIK"	"[R].nFTIPDHDNWPVGAGDSSFIk.[K]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"925.80811"	"2775.40976"	"2775.41425"	"-1.62"	"-0.00150"	"15/230"	"15"	"230"	"439495.101745605"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"64.5812"	"20771"	"20771"	"20745"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"37.1"	""	"28.0"	""	"35.4"	""	"19.7"	""	"26.9"	"22.7"	""	"1542"	"42"	"38.000"	"31.000"	"0.00507054192601028"	"15"	"0"	"5.081E-05"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTIPDHDNWPVGAGDSSFIK"	"[R].nFTIPDHDNWPVGAGDSSFIk.[K]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"925.80957"	"2775.41416"	"2775.41425"	"-0.03"	"-0.00003"	"14/230"	"14"	"230"	"590330.939086914"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"64.6353"	"20846"	"20846"	"20819"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.5"	""	"43.0"	""	"37.0"	""	"23.6"	"1.3"	"33.0"	"30.6"	""	"1553"	"43"	"38.000"	"31.000"	"0.0041604610455911"	"15"	"0"	"9.723E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DKPTYDEIFYTLSPVNGK"	"[K].dkPTYDEIFYTLSPVnGk.[I]"	"N-Term(TMT6plex); K2(TMT6plex); N16(Deamidated); K18(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"925.83887"	"2775.50205"	"2775.50597"	"-1.41"	"-0.00131"	"10/192"	"10"	"192"	"357909.744445801"	"HCD"	"MS2"	"22.68258"	"14.4"	"100.000"	"68.5333"	"22377"	"22377"	"22346"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.6"	""	"17.1"	""	"14.4"	""	"21.9"	""	"26.5"	"28.9"	""	"1297"	"15"	"38.000"	"31.000"	"2.23310930100025"	"16"	"0"	"0.0001514"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INFLVNNAGGQFMAPAEDITAK"	"[K].iNFLVNNAGGqFMAPAEDITAk.[G]"	"N-Term(TMT6plex); Q11(Deamidated); K22(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"927.50146"	"2780.48984"	"2780.46932"	"7.38"	"0.00684"	"9/214"	"9"	"214"	"178208.272705078"	"HCD"	"MS2"	"43.60989"	"12.9"	"100.000"	"79.7570"	"26997"	"26997"	"26975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.8"	""	"16.0"	""	"23.8"	""	"20.6"	""	"20.7"	"24.9"	""	"1428"	"3"	"38.000"	"31.000"	"35.7024657973563"	"13"	"0.000523"	"0.003239"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INFLVNNAGGQFMAPAEDITAK"	"[K].iNFLVNnAGGQFMAPAEDITAk.[G]"	"N-Term(TMT6plex); N7(Deamidated); K22(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"4"	"927.50146"	"2780.48984"	"2780.46932"	"7.38"	"0.00684"	"9/214"	"9"	"214"	"178208.272705078"	"HCD"	"MS2"	"43.60989"	"12.9"	"100.000"	"79.7570"	"26997"	"26997"	"26975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.8"	""	"16.0"	""	"23.8"	""	"20.6"	""	"20.7"	"24.9"	""	"1428"	"3"	"38.000"	"31.000"	"40.0588254887184"	"13"	"0.0005564"	"0.00347"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INFLVNNAGGQFMAPAEDITAK"	"[K].iNFLVnNAGGQFMAPAEDITAk.[G]"	"N-Term(TMT6plex); N6(Deamidated); K22(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"3"	"5"	"927.50146"	"2780.48984"	"2780.46932"	"7.38"	"0.00684"	"9/214"	"9"	"214"	"178208.272705078"	"HCD"	"MS2"	"43.60989"	"12.9"	"100.000"	"79.7570"	"26997"	"26997"	"26975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"16.8"	""	"16.0"	""	"23.8"	""	"20.6"	""	"20.7"	"24.9"	""	"1428"	"3"	"38.000"	"31.000"	"40.0588254887184"	"13"	"0.0005564"	"0.00347"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPLIIDPSGQATEFIMNEYK"	"[R].yPLIIDPSGQATEFIMNEYk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"929.82690"	"2787.46616"	"2787.46792"	"-0.63"	"-0.00059"	"4/196"	"4"	"196"	"79507.560546875"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"87.9854"	"30324"	"30324"	"30313"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"4.4"	""	""	""	"2.4"	""	"2.6"	""	"5.0"	"5.8"	""	"1433"	"5"	"38.000"	"31.000"	"22.4499922147212"	"13"	"0.002456"	"0.03618"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPLIIDPSGQATEFIMNEYK"	"[R].yPLIIDPSGQATEFIMNEYk.[D]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"929.82861"	"2787.47129"	"2787.46792"	"1.21"	"0.00112"	"4/196"	"4"	"196"	"61512.7702636719"	"HCD"	"MS2"	"7.251912"	"1.6"	"100.000"	"87.8878"	"30238"	"30238"	"30221"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.4"	""	""	""	""	""	"2.4"	""	"5.1"	"5.1"	""	"1424"	"8"	"38.000"	"31.000"	"10.6042508733017"	"13"	"0.002265"	"0.03318"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNNSSLIGLGYTQTLKPGIK"	"[K].vNNSSLIGLGYTQTLkPGIk.[L]"	"N-Term(TMT6plex); K16(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"930.89502"	"2790.67051"	"2790.66963"	"0.32"	"0.00029"	"17/208"	"17"	"208"	"524824.566345215"	"HCD"	"MS2"	"47.78804"	"39.0"	"100.000"	"58.4441"	"18323"	"18323"	"18293"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.2"	""	"62.1"	""	"64.5"	""	"55.8"	"0.4"	"58.5"	"75.1"	""	"252"	"69"	"31.000"	"24.000"	"1.45670142516205E-06"	"17"	"0"	"7.944E-07"	"1.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNNSSLIGLGYTQTLKPGIK"	"[K].vNNSSLIGLGYTQTLkPGIk.[L]"	"N-Term(TMT6plex); K16(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"930.89581"	"2790.67289"	"2790.66963"	"1.17"	"0.00109"	"14/208"	"14"	"208"	"365977.803222656"	"HCD"	"MS2"	"100"	"30.0"	"100.000"	"58.3463"	"18229"	"18229"	"18203"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.6"	""	"41.4"	""	"47.7"	""	"46.9"	""	"45.9"	"55.9"	""	"252"	"26"	"31.000"	"24.000"	"0.029537283073031"	"14"	"0"	"0.000134"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNNSSLIGLGYTQTLKPGIK"	"[K].vNNSSLIGLGYTqTLkPGIk.[L]"	"N-Term(TMT6plex); Q13(Deamidated); K16(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"3"	"3"	"0.4507"	"0.0000"	"1"	"1"	"1"	"931.22961"	"2791.67429"	"2791.65364"	"7.40"	"0.00688"	"16/208"	"16"	"208"	"526472.912353516"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"58.3096"	"18214"	"18214"	"18187"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"61.2"	""	"55.0"	""	"74.8"	""	"54.9"	""	"69.9"	"79.8"	""	"209"	"71"	"30.000"	"23.000"	"7.83639448752417E-07"	"17"	"0"	"1.631E-05"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INFLVNNAGGQFMAPAEDITAK"	"[K].iNFLVNnAGGQFmAPAEDITAk.[G]"	"N-Term(TMT6plex); N7(Deamidated); M13(Oxidation); K22(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"3"	"3"	"0.0588"	"0.0000"	"1"	"1"	"1"	"932.83105"	"2796.47861"	"2796.46424"	"5.14"	"0.00479"	"11/214"	"11"	"214"	"133351.70111084"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"72.2996"	"23966"	"23966"	"23935"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.7"	""	"7.6"	""	"10.2"	""	"11.9"	""	"10.8"	"10.4"	""	"1451"	"17"	"38.000"	"31.000"	"1.41135873921724"	"16"	"0.0001889"	"0.0006424"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEMWNNTAADDKQPYEK"	"[K].lGEMWNNTAADDkQPYEk.[K]"	"N-Term(TMT6plex); K13(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"933.15240"	"2797.44266"	"2797.44339"	"-0.26"	"-0.00024"	"9/188"	"9"	"188"	"883583.092041016"	"HCD"	"MS2"	"0"	"83.6"	"100.000"	"48.6511"	"14343"	"14343"	"14319"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"232.3"	""	"120.0"	""	"136.1"	""	"84.2"	"0.7"	"115.5"	"98.0"	""	"1516"	"28"	"38.000"	"31.000"	"0.109816906498693"	"14"	"0"	"7.101E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEMWNNTAADDKQPYEK"	"[K].lGEMWNNTAADDkQPYEk.[K]"	"N-Term(TMT6plex); K13(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"933.15283"	"2797.44394"	"2797.44339"	"0.20"	"0.00018"	"13/188"	"13"	"188"	"718221.337646484"	"HCD"	"MS2"	"0"	"71.5"	"100.000"	"48.3877"	"14188"	"14188"	"14160"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.6"	""	"112.1"	""	"111.0"	""	"72.2"	"0.1"	"92.6"	"85.2"	""	"1510"	"12"	"38.000"	"31.000"	"4.39487929417008"	"13"	"0"	"0.0001741"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIFVHPEPFSIENGLLTPTLK"	"[K].sIFVHPEPFSIENGLLTPTLk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"933.20038"	"2797.58658"	"2797.59042"	"-1.37"	"-0.00128"	"12/212"	"12"	"212"	"223113.885620117"	"HCD"	"MS2"	"38.09933"	"7.4"	"100.000"	"77.0820"	"25906"	"25906"	"25877"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"9.1"	""	"12.1"	""	"14.0"	""	"14.4"	""	"11.1"	"9.2"	""	"775"	"30"	"35.000"	"28.000"	"0.0353404200250415"	"20"	"0"	"3.631E-05"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIFVHPEPFSIENGLLTPTLK"	"[K].sIFVHPEPFSIENGLLTPTLk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"933.20099"	"2797.58841"	"2797.59042"	"-0.72"	"-0.00067"	"10/212"	"10"	"212"	"213295.666137695"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"77.2424"	"25920"	"25920"	"25897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.5"	""	"11.9"	""	"12.8"	""	"15.8"	""	"13.4"	"16.0"	""	"761"	"28"	"35.000"	"28.000"	"0.0604442037841455"	"18"	"0.0001889"	"0.0004029"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIFVHPEPFSIENGLLTPTLK"	"[K].sIFVHPEPFSIEnGLLTPTLk.[A]"	"N-Term(TMT6plex); N13(Deamidated); K21(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.2667"	"0.0000"	"1"	"1"	"1"	"933.52924"	"2798.57315"	"2798.57444"	"-0.46"	"-0.00043"	"4/212"	"4"	"212"	"102668.39050293"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"78.8830"	"26590"	"26590"	"26561"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.6"	""	"7.5"	""	"5.6"	""	"6.6"	""	"7.8"	"10.3"	""	"917"	"15"	"36.000"	"29.000"	"1.51823619199768"	"24"	"0.0001889"	"0.0004629"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPGSAVSPYPSFNPSSDVAALHK"	"[K].gGPGSAVSPYPSFNPSSDVAALHk.[A]"	"N-Term(TMT6plex); K24(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"934.15955"	"2800.46408"	"2800.46701"	"-1.05"	"-0.00098"	"21/230"	"21"	"230"	"690699.021972656"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"52.2549"	"15760"	"15760"	"15730"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.3"	""	"20.3"	""	"20.9"	""	"30.5"	""	"33.7"	"36.5"	""	"1487"	"75"	"38.000"	"31.000"	"2.27133384767573E-06"	"23"	"0"	"5.863E-07"	"1.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPGSAVSPYPSFNPSSDVAALHK"	"[K].gGPGSAVSPYPSFNPSSDVAALHk.[A]"	"N-Term(TMT6plex); K24(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"934.16089"	"2800.46811"	"2800.46701"	"0.39"	"0.00037"	"18/230"	"18"	"230"	"668295.026611328"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"52.4530"	"15891"	"15891"	"15862"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"23.2"	""	"18.5"	""	"23.3"	""	"32.8"	""	"37.5"	"39.3"	""	"1470"	"46"	"38.000"	"31.000"	"0.00194664760187592"	"19"	"0"	"9.857E-06"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"934.50116"	"2801.48893"	"2801.49079"	"-0.66"	"-0.00062"	"16/248"	"16"	"248"	"3559477.72070313"	"HCD"	"MS2"	"0"	"59.0"	"100.000"	"57.2378"	"17830"	"17830"	"17813"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.0"	""	"77.6"	""	"80.8"	""	"53.8"	"1.1"	"110.5"	"117.8"	""	"1433"	"62"	"38.000"	"31.000"	"4.97984923552373E-05"	"16"	"0"	"2.392E-07"	"1.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.12799"	"2801.49013"	"2801.49079"	"-0.23"	"-0.00016"	"22/248"	"22"	"248"	"8916769.32183838"	"HCD"	"MS2"	"15.28108"	"70.2"	"66.043"	"57.1710"	"17802"	"17802"	"17781"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"121.2"	""	"90.7"	""	"96.3"	""	"109.9"	"1.7"	"122.7"	"121.7"	""	"1418"	"64"	"38.000"	"31.000"	"3.08067748937644E-05"	"16"	"0"	"2.638E-07"	"1.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"934.50189"	"2801.49112"	"2801.49079"	"0.12"	"0.00011"	"19/248"	"19"	"248"	"4372880.46490479"	"HCD"	"MS2"	"0"	"71.5"	"100.000"	"57.0318"	"17692"	"17692"	"17675"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"140.2"	""	"85.6"	""	"102.1"	""	"66.2"	"0.0"	"142.3"	"140.6"	""	"1427"	"64"	"38.000"	"31.000"	"2.55501807872731E-05"	"17"	"0"	"2.561E-07"	"1.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"934.50238"	"2801.49259"	"2801.49079"	"0.64"	"0.00060"	"25/248"	"25"	"248"	"5073675.88110352"	"HCD"	"MS2"	"0"	"80.5"	"100.000"	"56.9473"	"17711"	"17711"	"17685"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"146.7"	""	"109.9"	""	"122.3"	""	"87.0"	"0.4"	"147.8"	"147.8"	""	"1414"	"62"	"38.000"	"31.000"	"4.3193601160824E-05"	"16"	"0"	"4.205E-07"	"1.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"934.50262"	"2801.49332"	"2801.49079"	"0.90"	"0.00084"	"16/248"	"16"	"248"	"4287370.45458984"	"HCD"	"MS2"	"0"	"70.6"	"100.000"	"56.7491"	"17576"	"17576"	"17547"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"138.3"	""	"102.0"	""	"98.8"	""	"67.2"	"0.5"	"130.8"	"130.7"	""	"1411"	"59"	"38.000"	"31.000"	"8.10022379966051E-05"	"16"	"0"	"1.591E-07"	"1.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.12885"	"2801.49355"	"2801.49079"	"0.99"	"0.00069"	"22/248"	"22"	"248"	"9504449.13873291"	"HCD"	"MS2"	"14.80127"	"112.9"	"100.000"	"56.9581"	"17661"	"17661"	"17643"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"187.9"	""	"151.2"	""	"148.0"	""	"177.9"	"0.5"	"199.2"	"204.1"	""	"1408"	"72"	"38.000"	"31.000"	"4.96103920552872E-06"	"17"	"0"	"1.209E-07"	"1.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"934.50372"	"2801.49662"	"2801.49079"	"2.08"	"0.00194"	"13/248"	"13"	"248"	"449366.914611816"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"55.7346"	"17162"	"17162"	"17131"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.6"	""	"14.0"	""	"18.0"	""	"9.2"	""	"20.8"	"22.0"	""	"1398"	"53"	"38.000"	"31.000"	"0.000325444679372548"	"16"	"0"	"8.793E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYAnTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex); N6(Deamidated)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"934.83508"	"2802.49070"	"2802.47480"	"5.67"	"0.00530"	"12/248"	"12"	"248"	"150967.255615234"	"HCD"	"MS2"	"39.32127"	"5.2"	"100.000"	"55.8382"	"17204"	"17204"	"17179"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"11.2"	""	"8.1"	""	"4.9"	""	"6.8"	""	"9.9"	"8.3"	""	"1362"	"17"	"38.000"	"31.000"	"1.48986566590965"	"14"	"0.0004166"	"0.002411"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYAnTVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex); N6(Deamidated)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"934.83557"	"2802.49216"	"2802.47480"	"6.19"	"0.00579"	"22/248"	"22"	"248"	"2671668.44030762"	"HCD"	"MS2"	"36.51622"	"47.1"	"100.000"	"56.9195"	"17700"	"17700"	"17669"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"89.1"	""	"66.7"	""	"69.6"	""	"44.8"	""	"91.4"	"87.0"	""	"1357"	"49"	"38.000"	"31.000"	"0.000825182201438561"	"16"	"0"	"2.215E-06"	"1.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DKPMYDEIFYTLSPVDGK"	"[R].dkPMYDEIFYTLSPVDGk.[I]"	"N-Term(TMT6plex); K2(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"935.83600"	"2805.49344"	"2805.49878"	"-1.90"	"-0.00178"	"9/198"	"9"	"198"	"168348.52355957"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"73.7013"	"24538"	"24538"	"24511"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"12.4"	""	"7.7"	""	"6.0"	""	"13.2"	""	"20.5"	"13.9"	""	"1489"	"16"	"38.000"	"31.000"	"2.05525021395605"	"14"	"0.0003839"	"0.001858"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLVIPNTLAVNAAQDSTDLVAK"	"[R].sLLVIPNTLAVNAAQDSTDLVAk.[L]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"937.87671"	"2811.61557"	"2811.62318"	"-2.71"	"-0.00254"	"11/244"	"11"	"244"	"148711.406921387"	"HCD"	"MS2"	"45.20073"	"3.9"	"100.000"	"83.3704"	"28471"	"28471"	"28445"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.7"	""	"6.6"	""	"6.7"	""	"6.6"	""	"3.9"	"4.7"	""	"572"	"43"	"34.000"	"27.000"	"0.00138792511046367"	"20"	"0"	"3.438E-05"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLVIPNTLAVNAAQDSTDLVAK"	"[R].sLLVIPNTLAVNAAQDSTDLVAk.[L]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6585"	"0.0000"	"1"	"1"	"1"	"937.87860"	"2811.62125"	"2811.62318"	"-0.69"	"-0.00064"	"11/244"	"11"	"244"	"190305.193054199"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"83.3389"	"28407"	"28407"	"28382"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"8.0"	""	"5.7"	""	"6.0"	""	"7.8"	""	"7.1"	"6.6"	""	"539"	"41"	"34.000"	"27.000"	"0.00204907931635379"	""	"0"	"6.918E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANNVLSGGTTMYPGIADR"	"[R].kDLYANNVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"3"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"938.83264"	"2814.48337"	"2814.48603"	"-0.95"	"-0.00089"	"15/248"	"15"	"248"	"1742612.34710693"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"54.8335"	"16793"	"16793"	"16764"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"59.2"	""	"55.5"	""	"51.6"	""	"32.1"	"0.3"	"72.9"	"63.5"	""	"1435"	"39"	"38.000"	"31.000"	"0.00920072193055696"	"15"	"0"	"2.438E-07"	"1.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANNVLSGGTTMYPGIADR"	"[R].kDLYANNVLSGGTTMYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"3"	"P62738"	"Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1"	"P63269; P62738; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"1"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"938.83344"	"2814.48575"	"2814.48603"	"-0.10"	"-0.00009"	"21/248"	"21"	"248"	"2346301.09075928"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"55.0327"	"16928"	"16928"	"16901"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"83.9"	""	"61.7"	""	"57.2"	""	"37.1"	"2.2"	"94.5"	"85.0"	""	"1427"	"49"	"38.000"	"31.000"	"0.000931952928682068"	"17"	"0"	"3.24E-07"	"1.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSWFIDDVEVHTAQTHAPEK"	"[R].fSWFIDDVEVHTAQTHAPEk.[Q]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.61676"	"2815.44521"	"2815.44555"	"-0.12"	"-0.00008"	"16/198"	"16"	"198"	"5227510.30670166"	"HCD"	"MS2"	"12.33699"	"109.1"	"100.000"	"61.7223"	"19603"	"19603"	"19577"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"157.9"	""	"120.2"	""	"127.0"	""	"214.3"	"0.2"	"217.9"	"197.3"	""	"1484"	"63"	"38.000"	"31.000"	"3.77923506324439E-05"	"17"	"0"	"2.051E-07"	"1.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSWFIDDVEVHTAQTHAPEK"	"[R].fSWFIDDVEVHTAQTHAPEk.[Q]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.61676"	"2815.44521"	"2815.44555"	"-0.12"	"-0.00008"	"18/198"	"18"	"198"	"7903629.48242188"	"HCD"	"MS2"	"1.085365"	"126.1"	"83.502"	"62.1877"	"19846"	"19846"	"19827"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"185.3"	""	"132.3"	""	"147.3"	""	"258.7"	""	"238.8"	"234.3"	""	"1484"	"65"	"38.000"	"31.000"	"2.16972106435975E-05"	"17"	"0"	"1.707E-07"	"1.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSWFIDDVEVHTAQTHAPEK"	"[R].fSWFIDDVEVHTAQTHAPEk.[Q]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"4"	"4"	"0.9577"	"0.0000"	"1"	"1"	"1"	"704.61688"	"2815.44570"	"2815.44555"	"0.05"	"0.00004"	"16/198"	"16"	"198"	"6966822.4107666"	"HCD"	"MS2"	"4.253457"	"125.8"	"100.000"	"61.8770"	"19719"	"19719"	"19699"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"193.2"	""	"138.6"	""	"140.9"	""	"268.7"	"1.8"	"228.6"	"220.0"	""	"1474"	"71"	"38.000"	"31.000"	"5.33909302575267E-06"	"20"	"0"	"2.185E-07"	"1.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSWFIDDVEVHTAQTHAPEK"	"[R].fSWFIDDVEVHTAQTHAPEk.[Q]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"4"	"4"	"0.9577"	"0.0000"	"1"	"1"	"1"	"704.61707"	"2815.44643"	"2815.44555"	"0.31"	"0.00022"	"16/198"	"16"	"198"	"11278776.2548218"	"HCD"	"MS2"	"0.7888525"	"152.3"	"71.385"	"62.0170"	"19723"	"19723"	"19705"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"222.1"	""	"164.5"	""	"156.1"	""	"312.4"	""	"296.8"	"296.0"	""	"1470"	"71"	"38.000"	"31.000"	"5.36151270037107E-06"	"20"	"0"	"3.752E-07"	"1.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTmYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex); M15(Oxidation)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"939.83331"	"2817.48539"	"2817.48570"	"-0.11"	"-0.00010"	"14/248"	"14"	"248"	"3359349.97027588"	"HCD"	"MS2"	"0"	"55.4"	"100.000"	"51.2191"	"15336"	"15336"	"15314"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"75.9"	""	"73.3"	""	"76.7"	""	"106.6"	"0.4"	"96.1"	"95.6"	""	"1453"	"62"	"38.000"	"31.000"	"4.83320947980564E-05"	"16"	"0"	"2.513E-06"	"1.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTmYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex); M15(Oxidation)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"939.83337"	"2817.48557"	"2817.48570"	"-0.05"	"-0.00004"	"12/248"	"12"	"248"	"614200.529907227"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"51.5371"	"15466"	"15466"	"15442"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"19.4"	""	"15.8"	""	"25.2"	""	"25.8"	""	"29.5"	"27.2"	""	"1452"	"43"	"38.000"	"31.000"	"0.00336462463728545"	"15"	"0"	"0.0001551"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTmYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex); M15(Oxidation)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"939.83350"	"2817.48594"	"2817.48570"	"0.08"	"0.00008"	"19/248"	"19"	"248"	"3649437.12438965"	"HCD"	"MS2"	"0"	"67.3"	"100.000"	"51.4005"	"15461"	"15461"	"15430"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"98.4"	""	"87.5"	""	"100.4"	""	"128.9"	""	"122.7"	"102.6"	""	"1458"	"46"	"38.000"	"31.000"	"0.00167004251886771"	"15"	"0"	"5.729E-06"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTmYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex); M15(Oxidation)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.12762"	"2817.48867"	"2817.48570"	"1.05"	"0.00074"	"22/248"	"22"	"248"	"7193125.76727295"	"HCD"	"MS2"	"13.29981"	"144.9"	"100.000"	"51.3756"	"15400"	"15400"	"15378"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"199.2"	""	"206.7"	""	"208.2"	""	"223.4"	""	"256.6"	"282.8"	""	"1453"	"58"	"38.000"	"31.000"	"0.000124232612641309"	"16"	"0"	"2.705E-06"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KDLYANTVLSGGTTMYPGIADR"	"[R].kDLYANTVLSGGTTmYPGIADR.[M]"	"N-Term(TMT6plex); K1(TMT6plex); M15(Oxidation)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.12769"	"2817.48891"	"2817.48570"	"1.14"	"0.00080"	"23/248"	"23"	"248"	"8100365.1885376"	"HCD"	"MS2"	"13.91694"	"179.0"	"100.000"	"51.5271"	"15512"	"15512"	"15494"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"257.5"	""	"262.7"	""	"268.7"	""	"271.1"	""	"319.5"	"319.8"	""	"1453"	"51"	"38.000"	"31.000"	"0.0005410477790427"	"16"	"0"	"9.073E-06"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYLQETGKPLDETLKK"	"[K].aAYLQETGkPLDETLkk.[A]"	"N-Term(TMT6plex); K9(TMT6plex); K16(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.17523"	"2821.67910"	"2821.68450"	"-1.91"	"-0.00135"	"13/168"	"13"	"168"	"5906794.75299072"	"HCD"	"MS2"	"9.609057"	"333.9"	"100.000"	"43.5202"	"12203"	"12203"	"12186"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"667.0"	""	"469.8"	""	"431.0"	""	"507.5"	"0.5"	"542.6"	"536.4"	""	"272"	"12"	"31.000"	"24.000"	"0.896476497532277"	"13"	"0"	"2.613E-05"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYLQETGKPLDETLKK"	"[K].aAYLQETGkPLDETLkk.[A]"	"N-Term(TMT6plex); K9(TMT6plex); K16(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.17548"	"2821.68007"	"2821.68450"	"-1.57"	"-0.00111"	"18/168"	"18"	"168"	"4891889.85681152"	"HCD"	"MS2"	"0"	"281.3"	"100.000"	"43.8943"	"12404"	"12404"	"12384"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"527.0"	""	"354.8"	""	"387.8"	""	"436.5"	""	"479.1"	"475.4"	""	"261"	"12"	"31.000"	"24.000"	"0.898691246729281"	"13"	"0"	"6.358E-05"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGNPLLVQDVESYDPVLNPVLNR"	"[R].fGNPLLVQDVESYDPVLNPVLNR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"943.17871"	"2827.52158"	"2827.51916"	"0.86"	"0.00081"	"4/226"	"4"	"226"	"70839.2577514648"	"HCD"	"MS2"	"22.44303"	"0.3"	"100.000"	"90.4001"	"31186"	"31186"	"31165"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	""	""	""	""	""	""	""	"2.9"	""	"1346"	"14"	"38.000"	"31.000"	"2.87088016153472"	"13"	"0.00103"	"0.01284"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DKLPYPYDDPFSLMTDPK"	"[K].dkLPYPYDDPFSLMTDPk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"P83645"	"Glutathione peroxidase 2 OS=Rattus norvegicus OX=10116 GN=Gpx2 PE=1 SV=3"	"1"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"943.83667"	"2829.49546"	"2829.49878"	"-1.17"	"-0.00111"	"8/198"	"8"	"198"	"236842.117553711"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"72.5672"	"24075"	"24075"	"24047"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"33.0"	""	"22.6"	""	"19.1"	""	"15.4"	""	"19.5"	"21.8"	""	"1461"	"5"	"38.000"	"31.000"	"22.11160259228"	"17"	"0.000523"	"0.002945"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSHELSDFGLESTTGEIPVVAIR"	"[K].tFSHELSDFGLESTTGEIPVVAIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"945.49695"	"2834.47629"	"2834.47735"	"-0.38"	"-0.00035"	"24/216"	"24"	"216"	"260995.401245117"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"72.6801"	"24121"	"24121"	"24095"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.1"	""	"2.3"	""	"4.3"	""	"3.6"	""	"6.4"	"6.8"	""	"1488"	"53"	"38.000"	"31.000"	"0.000384213778738421"	"18"	"0"	"5.211E-06"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSHELSDFGLESTTGEIPVVAIR"	"[K].tFSHELSDFGLESTTGEIPVVAIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"945.49713"	"2834.47684"	"2834.47735"	"-0.18"	"-0.00017"	"18/216"	"18"	"216"	"370165.082946777"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"72.6611"	"24062"	"24062"	"24033"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.9"	""	"4.8"	""	"7.6"	""	"8.7"	""	"4.9"	"8.1"	""	"1492"	"60"	"38.000"	"31.000"	"7.81157896845971E-05"	"21"	"0"	"2.627E-06"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYSPEYPGPSHR"	"[K].sTLINSLFLTDLYSPEYPGPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"946.16095"	"2836.46830"	"2836.47188"	"-1.26"	"-0.00119"	"19/252"	"19"	"252"	"618254.812011719"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"79.7616"	"26999"	"26999"	"26975"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.3"	""	"4.1"	""	"2.5"	""	"6.6"	""	"4.3"	"8.1"	""	"1531"	"51"	"38.000"	"31.000"	"0.000659090717297312"	"16"	"0"	"8.483E-07"	"1.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYSPEYPGPSHR"	"[K].sTLINSLFLTDLYSPEYPGPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.87286"	"2836.46963"	"2836.47188"	"-0.79"	"-0.00056"	"17/252"	"17"	"252"	"773312.892211914"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"79.8130"	"26969"	"26969"	"26945"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"9.9"	""	"8.1"	""	"13.9"	""	"14.2"	""	"14.6"	"19.2"	""	"1526"	"47"	"38.000"	"31.000"	"0.00158680857226012"	"15"	"0"	"1.441E-06"	"1.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYSPEYPGPSHR"	"[K].sTLINSLFLTDLYSPEYPGPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"946.16180"	"2836.47086"	"2836.47188"	"-0.36"	"-0.00034"	"21/252"	"21"	"252"	"820707.502258301"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"79.7760"	"26954"	"26954"	"26929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"5.7"	""	"7.1"	""	"6.0"	""	"7.6"	""	"8.3"	"6.2"	""	"1521"	"79"	"38.000"	"31.000"	"9.57412775669465E-07"	"17"	"0"	"4.629E-07"	"1.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYSPEYPGPSHR"	"[K].sTLINSLFLTDLYSPEYPGPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.87329"	"2836.47133"	"2836.47188"	"-0.19"	"-0.00014"	"16/252"	"16"	"252"	"371171.770324707"	"HCD"	"MS2"	"1.984323"	"7.6"	"100.000"	"79.9882"	"27091"	"27091"	"27071"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.2"	""	"10.5"	""	"5.3"	""	"16.3"	""	"13.9"	"16.3"	""	"1521"	"44"	"38.000"	"31.000"	"0.00276757384974741"	"15"	"0"	"4.729E-06"	"1.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYSPEYPGPSHR"	"[K].sTLINSLFLTDLYSPEYPGPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.87335"	"2836.47158"	"2836.47188"	"-0.10"	"-0.00007"	"9/252"	"9"	"252"	"190185.950012207"	"HCD"	"MS2"	"24.27171"	"8.9"	"100.000"	"80.1386"	"27102"	"27102"	"27073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"10.4"	""	"11.0"	""	"8.7"	""	"18.2"	""	"16.5"	"20.8"	""	"1521"	"14"	"38.000"	"31.000"	"2.97234501250122"	"14"	"0.0001889"	"0.000503"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYSPEYPGPSHR"	"[K].sTLINSLFLTDLYSPEYPGPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"946.16211"	"2836.47177"	"2836.47188"	"-0.04"	"-0.00003"	"13/252"	"13"	"252"	"200903.500366211"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"80.0711"	"27125"	"27125"	"27103"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.0"	""	"4.0"	""	"2.8"	""	"3.8"	""	""	"5.1"	""	"1521"	"45"	"38.000"	"31.000"	"0.00222381788334985"	"16"	"0"	"4.358E-05"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYSPEYPGPSHR"	"[K].sTLINSLFLTDLYSPEYPGPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"946.16229"	"2836.47232"	"2836.47188"	"0.16"	"0.00015"	"13/252"	"13"	"252"	"178410.028442383"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"80.0925"	"27083"	"27083"	"27057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"2.0"	""	"3.5"	""	"3.7"	""	"6.0"	"3.5"	""	"1520"	"54"	"38.000"	"31.000"	"0.000322710868599198"	"18"	"0"	"1.716E-05"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLINSLFLTDLYSPEYPGPSHR"	"[K].sTLINSLFLTDLYSPEYPGPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"4"	"4"	"0.9800"	"0.0000"	"1"	"1"	"1"	"709.87384"	"2836.47353"	"2836.47188"	"0.58"	"0.00041"	"18/252"	"18"	"252"	"480431.36151123"	"HCD"	"MS2"	"12.1588"	"7.6"	"100.000"	"79.6969"	"26973"	"26973"	"26943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.5"	""	"9.1"	""	"11.7"	""	"13.3"	""	"14.0"	"15.9"	""	"1512"	"50"	"38.000"	"31.000"	"0.000718657224004149"	"17"	"0"	"5.103E-06"	"1.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPIDGANDLFFQPPPLTPTSK"	"[R].lLPIDGANDLFFQPPPLTPTSk.[V]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"947.20392"	"2839.59720"	"2839.60099"	"-1.33"	"-0.00126"	"7/228"	"7"	"228"	"68477.7213745117"	"HCD"	"MS2"	"0"	"1.3"	"100.000"	"93.1664"	"32151"	"32151"	"32146"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.1"	""	""	""	"2.0"	""	""	""	"2.7"	"5.0"	""	"876"	"13"	"36.000"	"29.000"	"2.42926062275565"	"13"	"0.0001889"	"0.0007519"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPIDGANDLFFQPPPLTPTSK"	"[R].lLPIDGANDLFFQPPPLTPTSk.[V]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"947.20447"	"2839.59885"	"2839.60099"	"-0.75"	"-0.00071"	"8/228"	"8"	"228"	"91405.1962280273"	"HCD"	"MS2"	"0"	"1.3"	"100.000"	"93.4208"	"32232"	"32232"	"32228"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"2.7"	""	""	""	"2.2"	""	"2.8"	""	"2.6"	"2.0"	""	"875"	"24"	"36.000"	"29.000"	"0.170207250934998"	"14"	"0"	"0.0001654"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPIDGANDLFFQPPPLTPTSK"	"[R].lLPIDGANDLFFQPPPLTPTSk.[V]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"947.20471"	"2839.59958"	"2839.60099"	"-0.49"	"-0.00047"	"7/228"	"7"	"228"	"85783.04296875"	"HCD"	"MS2"	"0"	"1.1"	"100.000"	"92.9997"	"32071"	"32071"	"32063"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	""	""	"3.2"	""	"2.7"	""	"1.8"	""	"2.6"	""	""	"862"	"9"	"36.000"	"29.000"	"5.47617439344881"	"13"	"0.0003839"	"0.001639"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPIDGANDLFFQPPPLTPTSK"	"[R].lLPIDGANDLFFQPPPLTPTSk.[V]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"947.20502"	"2839.60050"	"2839.60099"	"-0.17"	"-0.00016"	"11/228"	"11"	"228"	"108433.716125488"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"93.2520"	"32151"	"32151"	"32147"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.3"	""	"2.6"	""	"4.2"	""	"6.3"	""	"4.8"	"5.6"	""	"860"	"32"	"36.000"	"29.000"	"0.0265747052059519"	"15"	"7.476E-05"	"0.0001847"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPIDGANDLFFQPPPLTPTSK"	"[R].lLPIDGANDLFFQPPPLTPTSk.[V]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.65601"	"2839.60219"	"2839.60099"	"0.42"	"0.00030"	"10/228"	"10"	"228"	"89558.0198974609"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"93.3760"	"32220"	"32220"	"32211"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.4"	""	"3.6"	""	"6.0"	""	"5.7"	""	"7.1"	"4.0"	""	"844"	"19"	"36.000"	"29.000"	"0.481185410350813"	"14"	"0.0001308"	"0.0003134"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAIGSFNGALSTVPVHNLGTTVIK"	"[R].tAIGSFnGALSTVPVHNLGTTVIk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K24(TMT6plex)"	"1"	"1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"952.88013"	"2856.62583"	"2856.62351"	"0.81"	"0.00077"	"7/258"	"7"	"258"	"112467.938720703"	"HCD"	"MS2"	"12.02043"	"7.9"	"100.000"	"64.5123"	"20743"	"20743"	"20713"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"12.1"	""	"10.8"	""	"9.8"	""	"14.6"	""	"11.4"	"16.7"	""	"687"	"6"	"35.000"	"28.000"	"8.29710796631836"	"15"	"0.00286"	"0.04911"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FRENVQDVLPALPNPDDYFLLR"	"[K].fRENVQDVLPALPNPDDYFLLR.[W]"	"N-Term(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"1"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"954.17615"	"2860.51389"	"2860.51949"	"-1.96"	"-0.00187"	"8/236"	"8"	"236"	"146973.065246582"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"83.3981"	"28482"	"28482"	"28461"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	""	""	"4.2"	""	"3.8"	""	"2.7"	""	"2.4"	"2.0"	""	"1457"	"25"	"38.000"	"31.000"	"0.244584851975993"	"15"	"0.0006037"	"0.003797"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FRENVQDVLPALPNPDDYFLLR"	"[K].fRENVQDVLPALPNPDDYFLLR.[W]"	"N-Term(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"1"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"954.17743"	"2860.51773"	"2860.51949"	"-0.62"	"-0.00059"	"11/236"	"11"	"236"	"189858.623962402"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"83.3618"	"28416"	"28416"	"28398"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.1"	""	"3.3"	""	"4.0"	""	"2.8"	""	"2.5"	"4.5"	""	"1447"	"15"	"38.000"	"31.000"	"2.49137174907275"	"15"	"0.000523"	"0.002859"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FRENVQDVLPALPNPDDYFLLR"	"[K].fRENVQDVLPALPNPDDYFLLR.[W]"	"N-Term(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"1"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"954.17755"	"2860.51810"	"2860.51949"	"-0.49"	"-0.00046"	"8/236"	"8"	"236"	"177225.055969238"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"82.9636"	"28254"	"28254"	"28224"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	"3.0"	""	"4.5"	""	"2.4"	""	"5.2"	"4.3"	""	"1428"	"28"	"38.000"	"31.000"	"0.108317396236597"	"18"	"0.0003839"	"0.001614"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FRENVQDVLPALPNPDDYFLLR"	"[K].fRENVQDVLPALPNPDDYFLLR.[W]"	"N-Term(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"954.17773"	"2860.51865"	"2860.51949"	"-0.30"	"-0.00028"	"7/236"	"7"	"236"	"110025.425354004"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"83.0253"	"28330"	"28330"	"28301"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"3.1"	""	"3.6"	""	"3.5"	""	""	""	"4.5"	"3.7"	""	"1429"	"8"	"38.000"	"31.000"	"11.3763313547806"	"14"	"0.00274"	"0.04406"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFEDVIAEPEGTHSFDGIWK"	"[K].iDFEDVIAEPEGTHSFDGIWk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"955.15613"	"2863.45383"	"2863.45545"	"-0.56"	"-0.00054"	"13/190"	"13"	"190"	"130940.104187012"	"HCD"	"MS2"	"33.9705"	"6.8"	"100.000"	"79.6261"	"26893"	"26893"	"26865"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.2"	""	"10.0"	""	"5.6"	""	"13.5"	""	"16.8"	"15.4"	""	"1579"	"51"	"38.000"	"31.000"	"0.000560211647807095"	"20"	"0"	"7.579E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFEDVIAEPEGTHSFDGIWK"	"[K].iDFEDVIAEPEGTHSFDGIWk.[A]"	"N-Term(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"955.15649"	"2863.45493"	"2863.45545"	"-0.18"	"-0.00017"	"11/190"	"11"	"190"	"129958.508972168"	"HCD"	"MS2"	"48.85557"	"7.0"	"100.000"	"79.6762"	"26964"	"26964"	"26943"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"9.8"	""	"9.6"	""	"11.2"	""	"14.7"	"16.4"	""	"1579"	"36"	"38.000"	"31.000"	"0.0178793668084472"	"29"	"0"	"0.0001526"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISPEELPAHFGGTLTDPDGNPK"	"[K].lISPEELPAHFGGTLTDPDGNPk.[C]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.63580"	"2863.52138"	"2863.52419"	"-0.98"	"-0.00070"	"16/212"	"16"	"212"	"8468564.34851074"	"HCD"	"MS2"	"12.7189"	"153.8"	"100.000"	"62.7392"	"20071"	"20071"	"20051"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"258.1"	""	"219.6"	""	"219.6"	""	"232.7"	"1.9"	"278.7"	"244.1"	""	"1411"	"39"	"38.000"	"31.000"	"0.00852112660667833"	"15"	"0"	"2.138E-05"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISPEELPAHFGGTLTDPDGNPK"	"[K].lISPEELPAHFGGTLTDPDGNPk.[C]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"955.17950"	"2863.52396"	"2863.52419"	"-0.08"	"-0.00008"	"11/212"	"11"	"212"	"212911.310424805"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"63.1098"	"20223"	"20223"	"20195"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"17.5"	""	"14.1"	""	"13.9"	""	"13.5"	""	"21.1"	"19.9"	""	"1398"	"38"	"38.000"	"31.000"	"0.0116272544260875"	"18"	"0.0001308"	"0.0002162"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISPEELPAHFGGTLTDPDGNPK"	"[K].lISPEELPAHFGGTLTDPDGNPk.[C]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"955.17957"	"2863.52414"	"2863.52419"	"-0.02"	"-0.00002"	"14/212"	"14"	"212"	"689517.749023438"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"62.9364"	"20099"	"20099"	"20073"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"40.2"	""	"36.9"	""	"39.1"	""	"38.6"	""	"43.1"	"47.2"	""	"1395"	"44"	"38.000"	"31.000"	"0.00278319869397594"	"16"	"0"	"2.348E-05"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISPEELPAHFGGTLTDPDGNPK"	"[K].lISPEELPAHFGGTLTDPDGNPk.[C]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9710"	"0.0000"	"1"	"1"	"1"	"955.17963"	"2863.52433"	"2863.52419"	"0.05"	"0.00004"	"20/212"	"20"	"212"	"1623471.58099365"	"HCD"	"MS2"	"7.260859"	"54.8"	"100.000"	"62.5746"	"19951"	"19951"	"19929"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"93.5"	""	"84.6"	""	"78.3"	""	"79.8"	""	"87.4"	"97.4"	""	"1393"	"69"	"38.000"	"31.000"	"8.62821822518403E-06"	"19"	"0"	"2.934E-06"	"1.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISPEELPAHFGGTLTDPDGNPK"	"[K].lISPEELPAHFGGTLTDPDGNPk.[C]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"955.17975"	"2863.52469"	"2863.52419"	"0.17"	"0.00017"	"17/212"	"17"	"212"	"1336938.76074219"	"HCD"	"MS2"	"11.58895"	"51.2"	"100.000"	"62.6307"	"20027"	"20027"	"20003"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"88.2"	""	"72.3"	""	"67.3"	""	"87.3"	""	"87.5"	"84.4"	""	"1397"	"48"	"38.000"	"31.000"	"0.00120549776755516"	"15"	"0"	"2.674E-05"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISPEELPAHFGGTLTDPDGNPK"	"[K].lISPEELPAHFGGTLTDPDGNPk.[C]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.63684"	"2863.52553"	"2863.52419"	"0.47"	"0.00033"	"14/212"	"14"	"212"	"4163280.6673584"	"HCD"	"MS2"	"1.585575"	"95.3"	"100.000"	"62.8743"	"20074"	"20074"	"20057"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"146.1"	"2.0"	"130.4"	""	"135.3"	""	"144.9"	"1.3"	"170.5"	"171.9"	""	"1397"	"36"	"38.000"	"31.000"	"0.0169108878914522"	"15"	"0"	"3.34E-05"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGYGQGAGTLSMDKGESLGIK"	"[K].gYGYGQGAGTLSMDkGESLGIk.[H]"	"N-Term(TMT6plex); K15(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"959.51721"	"2876.53708"	"2876.54310"	"-2.09"	"-0.00201"	"9/216"	"9"	"216"	"204465.922363281"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"50.8738"	"15195"	"15195"	"15170"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"52.9"	""	"53.4"	""	"35.6"	""	"20.9"	""	"28.6"	"20.3"	""	"1397"	"20"	"38.000"	"31.000"	"0.635574420933627"	"14"	"0.0001889"	"0.0005755"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGYGQGAGTLSMDKGESLGIK"	"[K].gYGYGQGAGTLSMDkGESLGIk.[H]"	"N-Term(TMT6plex); K15(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"959.52045"	"2876.54679"	"2876.54310"	"1.28"	"0.00123"	"13/216"	"13"	"216"	"679037.032165527"	"HCD"	"MS2"	"38.66287"	"63.0"	"100.000"	"50.9154"	"15262"	"15262"	"15238"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"168.4"	""	"139.8"	""	"101.1"	""	"46.3"	"0.0"	"70.0"	"66.0"	""	"1353"	"71"	"38.000"	"31.000"	"5.36127150070039E-06"	"17"	"0"	"5.404E-08"	"1.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVYGEPITASLGTDGSHYWSK"	"[K].gTVVYGEPITASLGTDGSHYWSk.[N]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"961.83423"	"2883.48813"	"2883.49289"	"-1.65"	"-0.00159"	"19/216"	"19"	"216"	"1587217.4899292"	"HCD"	"MS2"	"0"	"49.2"	"100.000"	"58.3738"	"18240"	"18240"	"18218"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"100.8"	""	"67.5"	""	"61.4"	""	"72.2"	""	"81.1"	"85.3"	""	"1510"	"75"	"38.000"	"31.000"	"2.21282440016399E-06"	"17"	"0"	"9.543E-08"	"1.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVYGEPITASLGTDGSHYWSK"	"[K].gTVVYGEPITASLGTDGSHYWSk.[N]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"961.83545"	"2883.49179"	"2883.49289"	"-0.38"	"-0.00037"	"23/216"	"23"	"216"	"1706248.68963623"	"HCD"	"MS2"	"50.13516"	"47.7"	"100.000"	"58.5084"	"18349"	"18349"	"18325"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"110.5"	""	"64.2"	""	"52.9"	""	"72.9"	"2.5"	"78.5"	"69.3"	""	"1517"	"82"	"38.000"	"31.000"	"4.58095035381985E-07"	"20"	"0"	"7.258E-09"	"2.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATESFASDPILYRPVAVALDTK"	"[R].aATESFASDPILYRPVAVALDTk.[G]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"965.20599"	"2893.60343"	"2893.60753"	"-1.42"	"-0.00137"	"14/232"	"14"	"232"	"758510.410888672"	"HCD"	"MS2"	"9.922743"	"48.2"	"100.000"	"68.6818"	"22489"	"22489"	"22458"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"107.8"	""	"63.2"	""	"67.0"	""	"63.6"	""	"77.1"	"77.1"	""	"992"	"33"	"36.000"	"29.000"	"0.0229340986614033"	"16"	"0"	"6.055E-06"	"1.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATESFASDPILYRPVAVALDTK"	"[R].aATESFASDPILYRPVAVALDTk.[G]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"965.20709"	"2893.60672"	"2893.60753"	"-0.28"	"-0.00027"	"12/232"	"12"	"232"	"519739.703063965"	"HCD"	"MS2"	"4.497561"	"33.8"	"100.000"	"69.1749"	"22638"	"22638"	"22618"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"76.3"	""	"39.0"	""	"45.6"	""	"40.7"	"0.1"	"60.7"	"57.5"	""	"973"	"32"	"36.000"	"29.000"	"0.0303446997462197"	"15"	"0"	"9.413E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATESFASDPILYRPVAVALDTK"	"[R].aATESFASDPILYRPVAVALDTk.[G]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"4"	"4"	"0.8621"	"0.0000"	"1"	"1"	"1"	"724.15717"	"2893.60683"	"2893.60753"	"-0.24"	"-0.00017"	"15/232"	"15"	"232"	"2485640.02716064"	"HCD"	"MS2"	"10.6739"	"64.7"	"100.000"	"68.7788"	"22528"	"22528"	"22506"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"115.6"	""	"88.5"	""	"81.3"	""	"100.9"	"0.6"	"112.0"	"113.4"	""	"972"	"29"	"36.000"	"29.000"	"0.061466186487098"	"18"	"0"	"2.11E-06"	"1.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATESFASDPILYRPVAVALDTK"	"[R].aATESFASDPILYRPVAVALDTk.[G]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"965.20721"	"2893.60709"	"2893.60753"	"-0.15"	"-0.00015"	"12/232"	"12"	"232"	"809264.709899902"	"HCD"	"MS2"	"0"	"50.5"	"100.000"	"68.8816"	"22519"	"22519"	"22490"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"113.7"	""	"65.5"	""	"66.2"	""	"67.5"	""	"77.1"	"87.4"	""	"970"	"37"	"36.000"	"29.000"	"0.00983426118967821"	"15"	"0"	"3.096E-06"	"1.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPAVDVIPLPQPSDFLKPGK"	"[K].vTPAVDVIPLPQPSDFLkPGk.[M]"	"N-Term(TMT6plex); K18(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"969.24841"	"2905.73069"	"2905.73698"	"-2.17"	"-0.00210"	"6/204"	"6"	"204"	"115028.66229248"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"77.4784"	"26068"	"26068"	"26037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.7"	""	"5.0"	""	"6.7"	""	"7.5"	""	"8.8"	"8.6"	""	"198"	"20"	"29.000"	"22.000"	"0.0949806625200774"	"14"	"0.0006037"	"0.004949"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPAVDVIPLPQPSDFLKPGK"	"[K].vTPAVDVIPLPQPSDFLkPGk.[M]"	"N-Term(TMT6plex); K18(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.18842"	"2905.73183"	"2905.73698"	"-1.77"	"-0.00129"	"9/204"	"9"	"204"	"776302.86328125"	"HCD"	"MS2"	"20.35276"	"23.4"	"100.000"	"77.4578"	"26059"	"26059"	"26037"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"36.2"	""	"23.1"	""	"28.5"	""	"33.0"	""	"47.0"	"56.1"	""	"196"	"19"	"29.000"	"22.000"	"0.132808562410402"	"14"	"0"	"0.0001617"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPAVDVIPLPQPSDFLKPGK"	"[K].vTPAVDVIPLPQPSDFLkPGk.[M]"	"N-Term(TMT6plex); K18(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.18933"	"2905.73549"	"2905.73698"	"-0.51"	"-0.00037"	"11/204"	"11"	"204"	"791551.131530762"	"HCD"	"MS2"	"11.03241"	"20.5"	"100.000"	"77.5281"	"26037"	"26037"	"26009"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"34.2"	""	"20.9"	""	"20.0"	""	"27.5"	""	"46.7"	"47.3"	""	"186"	"29"	"29.000"	"22.000"	"0.0107766294122427"	"14"	"0"	"1.35E-05"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPAVDVIPLPQPSDFLKPGK"	"[K].vTPAVDVIPLPQPSDFLkPGk.[M]"	"N-Term(TMT6plex); K18(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"969.25208"	"2905.74167"	"2905.73698"	"1.62"	"0.00157"	"6/204"	"6"	"204"	"89670.6470336914"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"77.7679"	"26135"	"26135"	"26105"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"4.6"	""	"2.4"	""	"3.5"	""	"7.0"	""	"10.2"	"11.5"	""	"160"	"17"	"29.000"	"22.000"	"0.17461839294744"	"14"	"0.001454"	"0.02024"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPAVDVIPLPQPSDFLKPGK"	"[K].vTPAVDVIPLPqPSDFLkPGk.[M]"	"N-Term(TMT6plex); Q12(Deamidated); K18(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"P09650"	"Mast cell protease 1 OS=Rattus norvegicus OX=10116 GN=Mcpt1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"969.58307"	"2906.73465"	"2906.72099"	"4.70"	"0.00455"	"8/204"	"8"	"204"	"96856.6486206055"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"77.7529"	"26180"	"26180"	"26149"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.8"	""	"6.1"	""	"3.5"	""	"7.3"	""	"6.5"	"9.7"	""	"197"	"6"	"29.000"	"22.000"	"2.48562856089336"	"13"	"0.002829"	"0.04692"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGAFPVTMLPGDGVGPELMHAVK"	"[R].vEGAFPVTMLPGDGVGPELMHAVk.[E]"	"N-Term(TMT6plex); K24(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"970.52649"	"2909.56491"	"2909.56693"	"-0.69"	"-0.00067"	"18/216"	"18"	"216"	"309147.407409668"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"76.3752"	"25623"	"25623"	"25599"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.9"	""	"12.9"	""	"16.6"	""	"9.1"	""	"17.4"	"19.0"	""	"1313"	"48"	"38.000"	"31.000"	"0.000940231355873082"	"16"	"0"	"1.347E-06"	"1.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGAFPVTMLPGDGVGPELMHAVK"	"[R].vEGAFPVTMLPGDGVGPELMHAVk.[E]"	"N-Term(TMT6plex); K24(TMT6plex)"	"1"	"1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"Q68FX0"	"Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"970.52673"	"2909.56565"	"2909.56693"	"-0.44"	"-0.00043"	"15/216"	"15"	"216"	"233395.057556152"	"HCD"	"MS2"	"8.806228"	"7.2"	"100.000"	"76.3891"	"25578"	"25578"	"25553"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"14.8"	""	"8.3"	""	"10.9"	""	"10.0"	""	"12.1"	"12.5"	""	"1312"	"42"	"38.000"	"31.000"	"0.00410113286460851"	"21"	"0"	"8.107E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITNLAQLSAANHDAAIFPGGFGAAK"	"[K].iTNLAQLSAANHDAAIFPGGFGAAk.[N]"	"N-Term(TMT6plex); K25(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.15454"	"2913.59633"	"2913.59870"	"-0.81"	"-0.00059"	"25/258"	"25"	"258"	"1250720.82733154"	"HCD"	"MS2"	"23.97554"	"35.8"	"100.000"	"68.7133"	"22450"	"22450"	"22426"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"56.6"	""	"51.1"	""	"50.5"	""	"49.9"	""	"64.2"	"68.6"	""	"1140"	"45"	"37.000"	"30.000"	"0.0018233702125241"	"15"	"0"	"5.688E-07"	"1.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITNLAQLSAANHDAAIFPGGFGAAK"	"[K].iTNLAQLSAANHDAAIFPGGFGAAk.[N]"	"N-Term(TMT6plex); K25(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"0.9444"	"0.0000"	"1"	"1"	"1"	"729.15466"	"2913.59682"	"2913.59870"	"-0.64"	"-0.00047"	"22/258"	"22"	"258"	"1837501.51672363"	"HCD"	"MS2"	"17.92201"	"45.4"	"100.000"	"68.4331"	"22387"	"22387"	"22362"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.6"	""	"61.8"	""	"60.5"	""	"68.4"	"0.6"	"80.2"	"87.5"	""	"1138"	"36"	"37.000"	"30.000"	"0.0152796098957969"	"17"	"0"	"4.963E-07"	"1.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFTEQPTWIIDPIDGTTNFVHR"	"[K].tVFTEQPTWIIDPIDGTTNFVHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"972.83990"	"2916.50516"	"2916.50932"	"-1.43"	"-0.00139"	"11/244"	"11"	"244"	"275443.770385742"	"HCD"	"MS2"	"14.00706"	"8.1"	"100.000"	"78.6610"	"26550"	"26550"	"26527"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.9"	""	"12.1"	""	"10.1"	""	"14.5"	""	"9.1"	"14.7"	""	"1593"	"30"	"39.000"	"32.000"	"0.0746768138516464"	"18"	"0"	"0.0001684"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFTEQPTWIIDPIDGTTNFVHR"	"[K].tVFTEQPTWIIDPIDGTTNFVHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"972.84039"	"2916.50663"	"2916.50932"	"-0.92"	"-0.00090"	"11/244"	"11"	"244"	"230054.783996582"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"78.7239"	"26525"	"26525"	"26497"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"13.9"	""	"10.7"	""	"9.8"	""	"9.8"	""	"11.5"	"11.7"	""	"1593"	"18"	"39.000"	"32.000"	"1.20001252821774"	"16"	"0.0001308"	"0.0002325"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAIMGNPkVk.[A]"	"N-Term(TMT6plex); K19(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.14697"	"2921.56606"	"2921.56859"	"-0.87"	"-0.00063"	"13/186"	"13"	"186"	"880167.306640625"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"70.8947"	"23340"	"23340"	"23315"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"54.5"	""	"41.8"	""	"55.4"	""	"47.6"	"0.5"	"64.7"	"65.9"	""	"1417"	"40"	"38.000"	"31.000"	"0.00695568417629659"	"15"	"0"	"5.883E-06"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAIMGNPkVk.[A]"	"N-Term(TMT6plex); K19(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"974.52704"	"2921.56656"	"2921.56859"	"-0.69"	"-0.00068"	"13/186"	"13"	"186"	"221326.167480469"	"HCD"	"MS2"	"0"	"17.6"	"100.000"	"70.7894"	"23349"	"23349"	"23322"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"28.5"	""	"25.4"	""	"21.9"	""	"24.5"	""	"39.4"	"27.8"	""	"1413"	"40"	"38.000"	"31.000"	"0.00762275859255374"	"15"	"0"	"2.164E-05"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDSFGDLSSASAIMGNPKVK"	"[R].yFDSFGDLSSASAIMGNPkVk.[A]"	"N-Term(TMT6plex); K19(TMT6plex); K21(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"974.52820"	"2921.57004"	"2921.56859"	"0.50"	"0.00048"	"13/186"	"13"	"186"	"192961.643310547"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"70.9015"	"23343"	"23343"	"23315"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"28.9"	""	"20.9"	""	"20.0"	""	"21.7"	""	"26.0"	"25.6"	""	"1409"	"49"	"38.000"	"31.000"	"0.00092871187231299"	"16"	"0"	"4.474E-05"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGPPPNPPPIDPASLEEFKK"	"[R].lPGPPPNPPPIDPASLEEFkk.[R]"	"N-Term(TMT6plex); K20(TMT6plex); K21(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.67572"	"2927.68105"	"2927.68494"	"-1.33"	"-0.00097"	"7/200"	"7"	"200"	"1209826.96081543"	"HCD"	"MS2"	"7.965217"	"36.9"	"100.000"	"68.5183"	"22422"	"22422"	"22394"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"49.2"	""	"37.5"	""	"52.6"	""	"67.0"	"1.4"	"75.7"	"67.0"	""	"573"	"2"	"34.000"	"27.000"	"17.0264703443362"	"13"	"0"	"8.274E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGPPPNPPPIDPASLEEFKK"	"[R].lPGPPPNPPPIDPASLEEFkk.[R]"	"N-Term(TMT6plex); K20(TMT6plex); K21(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.67596"	"2927.68203"	"2927.68494"	"-1.00"	"-0.00073"	"24/200"	"24"	"200"	"1712558.51312256"	"HCD"	"MS2"	"55.33247"	"40.2"	"100.000"	"68.4780"	"22354"	"22354"	"22330"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"39.2"	""	"35.9"	""	"34.6"	""	"90.6"	""	"101.5"	"83.8"	""	"562"	"36"	"34.000"	"27.000"	"0.00749387284730535"	"15"	"0"	"3.255E-06"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGPPPNPPPIDPASLEEFKK"	"[R].lPGPPPNPPPIDPASLEEFkk.[R]"	"N-Term(TMT6plex); K20(TMT6plex); K21(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.67664"	"2927.68471"	"2927.68494"	"-0.08"	"-0.00006"	"15/200"	"15"	"200"	"1719178.43377686"	"HCD"	"MS2"	"28.81351"	"48.8"	"100.000"	"68.1676"	"22279"	"22279"	"22250"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"42.6"	""	"42.9"	""	"49.7"	""	"105.4"	""	"116.7"	"111.1"	""	"529"	"13"	"34.000"	"27.000"	"1.2486067441422"	"13"	"0"	"1.439E-05"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTWEKPGGEAPMGYDFWYQPR"	"[K].gTWEkPGGEAPMGYDFWYQPR.[H]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"977.48242"	"2930.43271"	"2930.43361"	"-0.30"	"-0.00030"	"21/218"	"21"	"218"	"3222248.70513916"	"HCD"	"MS2"	"0"	"182.4"	"100.000"	"63.3655"	"20327"	"20327"	"20307"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"428.9"	""	"351.6"	""	"354.4"	""	"132.1"	"1.6"	"218.9"	"227.9"	""	"1255"	"36"	"37.000"	"30.000"	"0.0153678718425758"	"15"	"0"	"6.401E-07"	"1.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTWEKPGGEAPMGYDFWYQPR"	"[K].gTWEkPGGEAPMGYDFWYQPR.[H]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"977.48267"	"2930.43344"	"2930.43361"	"-0.05"	"-0.00005"	"16/218"	"16"	"218"	"702261.096496582"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"63.5887"	"20365"	"20365"	"20345"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"105.4"	""	"84.3"	""	"93.0"	""	"39.2"	"0.1"	"68.5"	"58.9"	""	"1256"	"33"	"37.000"	"30.000"	"0.03388126709395"	"15"	"0"	"1.553E-05"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTWEKPGGEAPMGYDFWYQPR"	"[K].gTWEkPGGEAPMGYDFWYQPR.[H]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"977.48322"	"2930.43509"	"2930.43361"	"0.51"	"0.00050"	"19/218"	"19"	"218"	"1915921.31634521"	"HCD"	"MS2"	"0"	"122.3"	"100.000"	"63.2861"	"20242"	"20242"	"20217"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"302.9"	""	"223.5"	""	"239.1"	""	"85.4"	"0.4"	"151.6"	"147.2"	""	"1271"	"31"	"38.000"	"31.000"	"0.0524947116956297"	"14"	"0"	"7.496E-06"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTWEKPGGEAPMGYDFWYQPR"	"[K].gTWEkPGGEAPMGYDFWYqPR.[H]"	"N-Term(TMT6plex); K5(TMT6plex); Q19(Deamidated)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"977.81635"	"2931.43448"	"2931.41762"	"5.75"	"0.00562"	"10/218"	"10"	"218"	"1663410.79162598"	"HCD"	"MS2"	"0"	"107.0"	"100.000"	"63.3120"	"20306"	"20306"	"20275"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"225.9"	""	"211.2"	""	"212.2"	""	"88.7"	""	"133.8"	"135.6"	""	"1271"	"26"	"38.000"	"31.000"	"0.153856395920084"	"14"	"0.0001308"	"0.0003001"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTWEKPGGEAPMGYDFWYQPR"	"[K].gTWEkPGGEAPmGYDFWYQPR.[H]"	"N-Term(TMT6plex); K5(TMT6plex); M12(Oxidation)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"982.81372"	"2946.42661"	"2946.42852"	"-0.65"	"-0.00064"	"24/218"	"24"	"218"	"897737.764221191"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"58.0531"	"18163"	"18163"	"18133"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"90.7"	""	"84.6"	""	"80.0"	""	"107.9"	""	"73.0"	"71.6"	""	"1189"	"27"	"37.000"	"30.000"	"0.131568480486055"	"14"	"0"	"6.922E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTWEKPGGEAPMGYDFWYQPR"	"[K].gTWEkPGGEAPmGYDFWYQPR.[H]"	"N-Term(TMT6plex); K5(TMT6plex); M12(Oxidation)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"982.81378"	"2946.42679"	"2946.42852"	"-0.59"	"-0.00058"	"18/218"	"18"	"218"	"946501.172607422"	"HCD"	"MS2"	"0"	"59.4"	"100.000"	"57.9556"	"18069"	"18069"	"18043"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"108.9"	""	"86.0"	""	"103.2"	""	"105.4"	""	"85.1"	"74.2"	""	"1190"	"25"	"37.000"	"30.000"	"0.172391943468229"	"14"	"0"	"4.369E-05"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPTQVMNRPSSISWDGLDPGK"	"[K].vLTPTQVMNRPSSISWDGLDPGk.[L]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"986.20325"	"2956.59519"	"2956.59665"	"-0.49"	"-0.00049"	"14/244"	"14"	"244"	"1106913.78466797"	"HCD"	"MS2"	"0"	"67.9"	"100.000"	"63.4777"	"20320"	"20320"	"20297"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"186.8"	""	"128.1"	""	"124.8"	""	"44.3"	""	"77.3"	"78.9"	""	"1314"	"21"	"38.000"	"31.000"	"0.482575611379225"	"14"	"0"	"0.0001268"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPTQVMNRPSSISWDGLDPGK"	"[K].vLTPTQVMNRPSSISWDGLDPGk.[L]"	"N-Term(TMT6plex); K23(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"986.20404"	"2956.59757"	"2956.59665"	"0.31"	"0.00031"	"17/244"	"17"	"244"	"1418204.08721924"	"HCD"	"MS2"	"0"	"84.1"	"100.000"	"63.4944"	"20380"	"20380"	"20355"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"234.6"	""	"164.2"	""	"149.3"	""	"60.4"	""	"78.4"	"102.1"	""	"1295"	"34"	"38.000"	"31.000"	"0.0258964225470311"	"15"	"0"	"4.254E-05"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPTQVMNRPSSISWDGLDPGK"	"[K].vLTPTQVmNRPSSISWDGLDPGk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K23(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"991.53424"	"2972.58817"	"2972.59156"	"-1.14"	"-0.00113"	"11/244"	"11"	"244"	"485930.17767334"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"56.4862"	"17523"	"17523"	"17493"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"50.5"	""	"44.5"	""	"43.7"	""	"53.2"	""	"33.7"	"33.3"	""	"1494"	"21"	"38.000"	"31.000"	"0.63726578517114"	"17"	"0.0001889"	"0.001023"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSSAEGEPAVPVLSNHRPPQPLK"	"[R].gLLSSAEGEPAVPVLSNHRPPQPLk.[G]"	"N-Term(TMT6plex); K25(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"5"	"5"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.15210"	"3051.73139"	"3051.73552"	"-1.35"	"-0.00083"	"25/232"	"25"	"232"	"6483387.46972656"	"HCD"	"MS2"	"25.24753"	"151.7"	"100.000"	"48.5714"	"14263"	"14263"	"14239"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"248.0"	""	"187.5"	""	"215.0"	""	"262.1"	""	"261.9"	"261.5"	""	"645"	"33"	"35.000"	"28.000"	"0.0157227938058342"	"15"	"0"	"1.138E-06"	"1.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSSAEGEPAVPVLSNHRPPQPLK"	"[R].gLLSSAEGEPAVPVLSNHRPPQPLk.[G]"	"N-Term(TMT6plex); K25(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.68921"	"3051.73501"	"3051.73552"	"-0.17"	"-0.00013"	"24/232"	"24"	"232"	"7764872.72747803"	"HCD"	"MS2"	"0"	"112.1"	"100.000"	"48.4545"	"14215"	"14215"	"14192"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"238.7"	""	"129.6"	""	"146.8"	""	"200.1"	""	"173.9"	"175.5"	""	"602"	"49"	"34.000"	"27.000"	"0.000352830805029987"	"16"	"0"	"4.698E-08"	"1.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSSAEGEPAVPVLSNHRPPQPLK"	"[R].gLLSSAEGEPAVPVLSNHRPPQPLk.[G]"	"N-Term(TMT6plex); K25(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.69031"	"3051.73940"	"3051.73552"	"1.27"	"0.00097"	"22/232"	"22"	"232"	"7032527.34204102"	"HCD"	"MS2"	"0"	"121.4"	"100.000"	"48.7224"	"14372"	"14372"	"14351"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"273.5"	""	"142.5"	""	"169.4"	""	"193.3"	"1.9"	"188.2"	"176.6"	""	"589"	"47"	"34.000"	"27.000"	"0.000583559709099601"	"15"	"0"	"6.248E-08"	"1.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDKLHVDPENFR"	"[K].gTFAHLSELHcDkLHVDPENFR.[L]"	"N-Term(TMT6plex); C11(Methylthio); K13(TMT6plex)"	"2"	"2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3;Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"1"	"6"	"6"	"1.0000"	"0.0000"	"1"	"1"	"1"	"512.43018"	"3069.54467"	"3069.54390"	"0.25"	"0.00013"	"14/220"	"14"	"220"	"5061058.40478516"	"HCD"	"MS2"	"13.66881"	"70.1"	"100.000"	"52.7545"	"16014"	"16014"	"15990"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"149.5"	"3.3"	"101.0"	""	"101.4"	""	"108.3"	"1.0"	"100.1"	"96.6"	""	"1467"	"19"	"38.000"	"31.000"	"1.01718540047753"	"14"	"0"	"2.305E-06"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GANPGFHEAIGDVLALSVSTPAHLHK"	"[R].gANPGFHEAIGDVLALSVSTPAHLHk.[I]"	"N-Term(TMT6plex); K26(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"5"	"5"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.14545"	"3096.69813"	"3096.69947"	"-0.43"	"-0.00027"	"17/270"	"17"	"270"	"2480328.75543213"	"HCD"	"MS2"	"22.53312"	"60.0"	"100.000"	"60.3551"	"19045"	"19045"	"19017"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"63.9"	""	"67.9"	""	"76.4"	""	"114.4"	"0.7"	"128.2"	"118.9"	""	"981"	"16"	"36.000"	"29.000"	"1.25209998895534"	"13"	"0"	"1.254E-06"	"1.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLGEMWNNTAADDKQPYEK"	"[K].kLGEMWNNTAADDkQPYEk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K14(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"2"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.42981"	"3154.69741"	"3154.70129"	"-1.23"	"-0.00097"	"5/208"	"5"	"208"	"2212615.08392334"	"HCD"	"MS2"	"17.02543"	"139.0"	"100.000"	"42.2050"	"11675"	"11675"	"11644"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"490.3"	""	"226.9"	""	"225.8"	""	"110.4"	"2.0"	"118.1"	"127.9"	""	"1191"	"8"	"37.000"	"30.000"	"9.09665587680771"	"13"	"0"	"9.678E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLADPSAFAAAAPVAAATTAAPAAAAAPAK"	"[K].aFLADPSAFAAAAPVAAATTAAPAAAAAPAk.[V]"	"N-Term(TMT6plex); K31(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"0.9811"	"0.0000"	"1"	"1"	"1"	"1061.59033"	"3182.75644"	"3182.76140"	"-1.56"	"-0.00165"	"20/270"	"20"	"270"	"711132.112609863"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"77.5131"	"26082"	"26082"	"26053"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"10.4"	""	"8.3"	""	"11.4"	""	"23.8"	""	"21.2"	"23.9"	""	"985"	"53"	"36.000"	"29.000"	"0.000220498802306859"	"17"	"0"	"2.988E-06"	"1.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLADPSAFAAAAPVAAATTAAPAAAAAPAK"	"[K].aFLADPSAFAAAAPVAAATTAAPAAAAAPAk.[V]"	"N-Term(TMT6plex); K31(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"796.44531"	"3182.75942"	"3182.76140"	"-0.62"	"-0.00050"	"17/270"	"17"	"270"	"770277.82409668"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"77.8814"	"26232"	"26232"	"26213"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"21.0"	""	"22.5"	""	"19.7"	""	"29.3"	"0.8"	"35.1"	"34.0"	""	"950"	"54"	"36.000"	"29.000"	"0.000199845148482611"	"16"	"0"	"5.072E-07"	"1.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLADPSAFAAAAPVAAATTAAPAAAAAPAK"	"[K].aFLADPSAFAAAAPVAAATTAAPAAAAAPAk.[V]"	"N-Term(TMT6plex); K31(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1061.59180"	"3182.76084"	"3182.76140"	"-0.18"	"-0.00019"	"23/270"	"23"	"270"	"934363.610229492"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"77.5974"	"26065"	"26065"	"26041"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.5"	""	"16.1"	""	"13.7"	""	"25.9"	""	"29.9"	"24.2"	""	"943"	"84"	"36.000"	"29.000"	"1.88573949512358E-07"	"18"	"0"	"1.378E-08"	"1.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLADPSAFAAAAPVAAATTAAPAAAAAPAK"	"[K].aFLADPSAFAAAAPVAAATTAAPAAAAAPAk.[V]"	"N-Term(TMT6plex); K31(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"4"	"4"	"0.9873"	"0.0000"	"1"	"1"	"1"	"796.44592"	"3182.76186"	"3182.76140"	"0.14"	"0.00011"	"26/270"	"26"	"270"	"2360768.79675293"	"HCD"	"MS2"	"7.176222"	"28.9"	"100.000"	"77.5465"	"26044"	"26044"	"26025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"30.2"	""	"27.7"	""	"35.7"	""	"61.3"	""	"62.6"	"59.0"	""	"940"	"79"	"36.000"	"29.000"	"5.39632202103534E-07"	"18"	"0"	"3.817E-09"	"2.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLADPSAFAAAAPVAAATTAAPAAAAAPAK"	"[K].aFLADPSAFAAAAPVAAATTAAPAAAAAPAk.[V]"	"N-Term(TMT6plex); K31(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"796.44592"	"3182.76186"	"3182.76140"	"0.14"	"0.00011"	"26/270"	"26"	"270"	"4998727.80780029"	"HCD"	"MS2"	"1.15181"	"47.5"	"100.000"	"77.5712"	"26105"	"26105"	"26085"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"52.4"	""	"43.0"	""	"46.4"	""	"111.7"	""	"97.0"	"104.8"	""	"940"	"90"	"36.000"	"29.000"	"4.4166995596538E-08"	"18"	"0"	"3.705899E-09"	"2.118751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLADPSAFAAAAPVAAATTAAPAAAAAPAK"	"[K].aFLADPSAFAAAAPVAAATTAAPAAAAAPAk.[V]"	"N-Term(TMT6plex); K31(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1061.59277"	"3182.76377"	"3182.76140"	"0.74"	"0.00079"	"23/270"	"23"	"270"	"360341.657531738"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"77.8059"	"26201"	"26201"	"26181"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"7.2"	""	"2.6"	""	"7.5"	""	"11.8"	""	"13.6"	"10.8"	""	"926"	"70"	"36.000"	"29.000"	"4.70523144799131E-06"	"17"	"0"	"3.106E-07"	"1.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESVVFVQTDKPMYKPGQSVK"	"[K].eSVVFVQTDkPMYkPGQSVk.[F]"	"N-Term(TMT6plex); K10(TMT6plex); K14(TMT6plex); K20(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"796.71124"	"3183.82314"	"3183.82576"	"-0.82"	"-0.00065"	"11/212"	"11"	"212"	"1424825.06958008"	"HCD"	"MS2"	"39.01946"	"90.0"	"100.000"	"44.8138"	"12779"	"12779"	"12759"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"222.4"	""	"144.0"	""	"120.3"	""	"145.1"	"1.1"	"110.2"	"103.3"	""	"477"	"25"	"33.000"	"26.000"	"0.0755941839935873"	"14"	"0"	"2.239E-06"	"1.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQGPYDVVVLPGGNLGAQNLSESALVK"	"[K].tQGPYDVVVLPGGNLGAQNLSESALVk.[E]"	"N-Term(TMT6plex); K27(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"1062.25867"	"3184.76145"	"3184.76180"	"-0.11"	"-0.00012"	"5/302"	"5"	"302"	"73685.7895507813"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"75.0947"	"25055"	"25055"	"25025"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"3.1"	""	"4.3"	""	"3.1"	""	""	""	"2.4"	""	""	"967"	"20"	"36.000"	"29.000"	"0.475769369635508"	"17"	"0"	"0.0001351"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQGPYDVVVLPGGNLGAQNLSESALVK"	"[K].tQGPYDVVVLPGGNLGAqNLSESALVk.[E]"	"N-Term(TMT6plex); Q18(Deamidated); K27(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"3"	"3"	"0.0556"	"0.0000"	"1"	"1"	"1"	"1062.59314"	"3185.76487"	"3185.74581"	"5.98"	"0.00635"	"14/302"	"14"	"302"	"125379.502868652"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"74.9723"	"25005"	"25005"	"24977"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"7.2"	""	"4.9"	""	"6.5"	""	"5.7"	""	"4.3"	"6.6"	""	"818"	"36"	"36.000"	"29.000"	"0.00932659907448171"	"18"	"0.0001889"	"0.0004784"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTFSHELSDFGLESTTGEIPVVAIR"	"[R].kTFSHELSDFGLESTTGEIPVVAIR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"798.68793"	"3191.72988"	"3191.73525"	"-1.68"	"-0.00134"	"21/272"	"21"	"272"	"2007367.38012695"	"HCD"	"MS2"	"0"	"36.0"	"100.000"	"65.2532"	"21098"	"21098"	"21075"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.7"	""	"51.8"	""	"46.1"	""	"59.9"	"0.7"	"64.3"	"63.5"	""	"1211"	"53"	"37.000"	"30.000"	"0.00027740491240565"	"16"	"0"	"1.011E-07"	"1.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTFSHELSDFGLESTTGEIPVVAIR"	"[R].kTFSHELSDFGLESTTGEIPVVAIR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"4"	"4"	"0.9091"	"0.0000"	"1"	"1"	"1"	"798.68915"	"3191.73476"	"3191.73525"	"-0.15"	"-0.00012"	"16/272"	"16"	"272"	"3161724.06530762"	"HCD"	"MS2"	"23.1037"	"59.8"	"100.000"	"65.4892"	"21142"	"21142"	"21113"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"72.0"	""	"85.6"	""	"79.7"	""	"107.0"	""	"113.9"	"112.4"	""	"1195"	"11"	"37.000"	"30.000"	"5.12080112525146"	"14"	"0"	"0.000145"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESVVFVQTDKPMYKPGQSVK"	"[K].eSVVFVQTDkPmYkPGQSVk.[F]"	"N-Term(TMT6plex); K10(TMT6plex); M12(Oxidation); K14(TMT6plex); K20(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q6IE52; P14046"	"Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.6667"	"0.0000"	"1"	"1"	"1"	"800.71118"	"3199.82290"	"3199.82067"	"0.69"	"0.00056"	"8/212"	"8"	"212"	"830325.88671875"	"HCD"	"MS2"	"65.58447"	"46.5"	"100.000"	"41.1117"	"11274"	"11274"	"11245"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"70.5"	""	"57.9"	""	"60.0"	""	"102.7"	""	"76.1"	"75.2"	""	"498"	"6"	"33.000"	"26.000"	"6.0144974777679"	"15"	"0.0004166"	"0.002205"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLFASAENEPPVPLVGNWRPPQPIK"	"[R].sLFASAENEPPVPLVGNWRPPQPIk.[G]"	"N-Term(TMT6plex); K25(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1067.93213"	"3201.78183"	"3201.78247"	"-0.20"	"-0.00021"	"7/242"	"7"	"242"	"72619.5432739258"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"74.0265"	"24619"	"24619"	"24593"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"15.0"	""	"3.4"	""	""	""	"2.9"	""	""	"13.0"	""	"880"	"39"	"36.000"	"29.000"	"0.00498256159823645"	"15"	"0.0001308"	"0.0002111"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGMVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1068.29456"	"3202.86911"	"3202.87282"	"-1.16"	"-0.00123"	"19/258"	"19"	"258"	"408690.858093262"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"71.3003"	"23506"	"23506"	"23475"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"42.7"	""	"28.7"	""	"29.0"	""	"14.1"	""	"31.4"	"37.4"	""	"285"	"25"	"31.000"	"24.000"	"0.0402545396425488"	"14"	"0"	"2.021E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGMVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1068.29468"	"3202.86948"	"3202.87282"	"-1.04"	"-0.00111"	"15/258"	"15"	"258"	"439206.393249512"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"71.2965"	"23556"	"23556"	"23530"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"54.1"	""	"28.6"	""	"32.1"	""	"24.0"	"0.9"	"38.6"	"35.6"	""	"284"	"64"	"31.000"	"24.000"	"5.64012000246605E-06"	"17"	"0"	"2.309E-06"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGMVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"4"	"4"	"0.9459"	"0.0000"	"1"	"1"	"1"	"801.47302"	"3202.87026"	"3202.87282"	"-0.80"	"-0.00064"	"20/258"	"20"	"258"	"2956884.13000488"	"HCD"	"MS2"	"5.371525"	"54.7"	"100.000"	"71.1675"	"23503"	"23503"	"23482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"117.7"	""	"76.2"	""	"76.8"	""	"62.8"	""	"88.2"	"95.4"	""	"283"	"37"	"31.000"	"24.000"	"0.00299058699136886"	"17"	"0"	"4.305E-06"	"1.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGMVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.47345"	"3202.87197"	"3202.87282"	"-0.27"	"-0.00021"	"18/258"	"18"	"258"	"480055.610534668"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"71.6413"	"23645"	"23645"	"23619"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"31.1"	""	"18.3"	""	"25.3"	""	"26.4"	""	"34.1"	"29.6"	""	"278"	"24"	"31.000"	"24.000"	"0.0619462185272529"	"14"	"0"	"0.0001427"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGMVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.47345"	"3202.87197"	"3202.87282"	"-0.27"	"-0.00021"	"22/258"	"22"	"258"	"4605468.49639893"	"HCD"	"MS2"	"0"	"84.8"	"100.000"	"71.3145"	"23511"	"23511"	"23491"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"178.8"	""	"125.5"	""	"122.4"	""	"97.2"	"0.2"	"135.6"	"141.3"	""	"278"	"32"	"31.000"	"24.000"	"0.00798021882468186"	"15"	"0"	"4.007E-06"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGmVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); M10(Oxidation); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.47125"	"3218.86318"	"3218.86773"	"-1.41"	"-0.00114"	"18/258"	"18"	"258"	"598039.629760742"	"HCD"	"MS2"	"5.289896"	"21.5"	"100.000"	"65.5851"	"21234"	"21234"	"21203"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"30.6"	""	"28.5"	""	"27.8"	""	"41.6"	""	"43.0"	"33.2"	""	"350"	"17"	"32.000"	"25.000"	"0.318447650256747"	"14"	"0"	"2.086E-05"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGmVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); M10(Oxidation); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1073.62610"	"3218.86374"	"3218.86773"	"-1.24"	"-0.00133"	"21/258"	"21"	"258"	"196155.498352051"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"65.4155"	"21112"	"21112"	"21081"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"17.6"	""	"10.8"	""	"17.1"	""	"31.2"	""	"20.6"	"17.3"	""	"349"	"42"	"32.000"	"25.000"	"0.00117164334835579"	"15"	"0"	"8.422E-06"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGmVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); M10(Oxidation); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1073.62634"	"3218.86448"	"3218.86773"	"-1.01"	"-0.00109"	"12/258"	"12"	"258"	"191897.054992676"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"65.2300"	"21089"	"21089"	"21059"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"13.1"	""	"15.7"	""	"16.0"	""	"30.6"	""	"19.6"	"15.8"	""	"346"	"25"	"32.000"	"25.000"	"0.0509384942647186"	"14"	"0.0001308"	"0.0002348"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGmVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); M10(Oxidation); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.47260"	"3218.86855"	"3218.86773"	"0.25"	"0.00020"	"16/258"	"16"	"258"	"2635077.63006592"	"HCD"	"MS2"	"0"	"56.9"	"100.000"	"65.3603"	"21089"	"21089"	"21065"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"77.3"	""	"70.4"	""	"84.2"	""	"141.6"	""	"87.4"	"79.4"	""	"330"	"22"	"32.000"	"25.000"	"0.0987379131849527"	"14"	"0"	"2.015E-05"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGmVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); M10(Oxidation); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.47327"	"3218.87124"	"3218.86773"	"1.09"	"0.00088"	"18/258"	"18"	"258"	"601350.882507324"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"65.7270"	"21239"	"21239"	"21209"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"32.1"	""	"24.3"	""	"32.8"	""	"40.0"	""	"34.9"	"36.1"	""	"309"	"18"	"31.000"	"24.000"	"0.23116840886659"	"14"	"0"	"1.63E-05"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETGVLKPGMVVTFAPVNVTTEVK"	"[R].vETGVLkPGmVVTFAPVNVTTEVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex); M10(Oxidation); K24(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.47430"	"3218.87539"	"3218.86773"	"2.38"	"0.00191"	"18/258"	"18"	"258"	"2670472.23046875"	"HCD"	"MS2"	"0"	"49.9"	"100.000"	"65.1493"	"21056"	"21056"	"21027"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"73.0"	""	"61.1"	""	"72.4"	""	"136.5"	""	"67.4"	"63.0"	""	"291"	"29"	"31.000"	"24.000"	"0.019582268151514"	"14"	"0"	"4.784E-06"	"1.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTPPMPLLTPATPGGLPPAAAVAAAAATAK"	"[K].aVTPPMPLLTPATPGGLPPAAAVAAAAATAk.[I]"	"N-Term(TMT6plex); K31(TMT6plex)"	"1"	"1"	"Q9WV25"	"Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus OX=10116 GN=Puf60 PE=2 SV=2"	"Q9WV25"	"Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus OX=10116 GN=Puf60 PE=2 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.97437"	"3252.87563"	"3252.87941"	"-1.16"	"-0.00095"	"10/292"	"10"	"292"	"137861.181335449"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"89.6813"	"30914"	"30914"	"30897"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"6.1"	""	""	""	"2.2"	""	"3.9"	""	"8.5"	"8.8"	""	"383"	"26"	"32.000"	"25.000"	"0.0439712466113517"	"14"	"0"	"9.758E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTPPMPLLTPATPGGLPPAAAVAAAAATAK"	"[K].aVTPPMPLLTPATPGGLPPAAAVAAAAATAk.[I]"	"N-Term(TMT6plex); K31(TMT6plex)"	"1"	"1"	"Q9WV25"	"Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus OX=10116 GN=Puf60 PE=2 SV=2"	"Q9WV25"	"Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus OX=10116 GN=Puf60 PE=2 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.97491"	"3252.87783"	"3252.87941"	"-0.49"	"-0.00040"	"6/292"	"6"	"292"	"83688.092590332"	"HCD"	"MS2"	"45.92469"	"1.8"	"100.000"	"89.8306"	"31007"	"31007"	"30998"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"5.0"	""	"2.5"	""	"2.0"	""	"2.1"	""	"3.1"	"2.3"	""	"373"	"18"	"32.000"	"25.000"	"0.330886338186016"	"14"	"0.0001889"	"0.0004168"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGPFGQIFRPDNFVFGQSGAGNNWAK"	"[R].sGPFGQIFRPDNFVFGQSGAGNNWAk.[G]"	"N-Term(TMT6plex); K26(TMT6plex)"	"3"	"4"	"P85108; Q6P9T8; P69897"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1;Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1086.22729"	"3256.66733"	"3256.66924"	"-0.58"	"-0.00063"	"4/274"	"4"	"274"	"154562.410949707"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"75.6688"	"25341"	"25341"	"25311"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"24.9"	""	"23.6"	""	"26.5"	""	"21.1"	""	"23.2"	"20.4"	""	"1518"	"2"	"38.000"	"31.000"	"46.1574465970547"	"13"	"0.0001889"	"0.0008721"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQIPGKPEIVNPASELTANVPNK"	"[R].vYQIPGkPEIVNPASELTANVPNk.[V]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1089.29541"	"3265.87168"	"3265.87632"	"-1.42"	"-0.00155"	"12/244"	"12"	"244"	"463416.462402344"	"HCD"	"MS2"	"7.484826"	"22.9"	"100.000"	"63.8932"	"20543"	"20543"	"20515"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"35.3"	""	"30.8"	""	"26.7"	""	"38.0"	""	"43.5"	"44.7"	""	"410"	"25"	"33.000"	"26.000"	"0.0620517252760768"	"14"	"0"	"0.0001636"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQIPGKPEIVNPASELTANVPNK"	"[R].vYQIPGkPEIVNPASELTANVPNk.[V]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1089.29578"	"3265.87278"	"3265.87632"	"-1.09"	"-0.00118"	"9/244"	"9"	"244"	"423794.660583496"	"HCD"	"MS2"	"0"	"20.1"	"100.000"	"63.9547"	"20515"	"20515"	"20489"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"35.0"	""	"24.6"	""	"24.0"	""	"31.7"	""	"38.5"	"38.3"	""	"407"	"28"	"33.000"	"26.000"	"0.0302387903205406"	"14"	"0"	"0.0001517"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQIPGKPEIVNPASELTANVPNK"	"[R].vYQIPGkPEIVNPASELTANVPNk.[V]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"4"	"4"	"0.8889"	"0.0000"	"1"	"1"	"1"	"817.22382"	"3265.87343"	"3265.87632"	"-0.88"	"-0.00072"	"21/244"	"21"	"244"	"4358577.36126709"	"HCD"	"MS2"	"21.43455"	"83.9"	"100.000"	"63.7867"	"20446"	"20446"	"20425"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"126.3"	""	"115.1"	""	"117.8"	""	"126.4"	"1.0"	"152.8"	"155.0"	""	"406"	"27"	"33.000"	"26.000"	"0.0374538130093433"	"17"	"0"	"1.239E-05"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQIPGKPEIVNPASELTANVPNK"	"[R].vYQIPGkPEIVNPASELTANVPNk.[V]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"5"	"5"	"0.7647"	"0.0000"	"1"	"1"	"1"	"653.98059"	"3265.87385"	"3265.87632"	"-0.76"	"-0.00050"	"11/244"	"11"	"244"	"5736680.31707764"	"HCD"	"MS2"	"7.15549"	"104.6"	"100.000"	"63.9064"	"20495"	"20495"	"20473"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"150.3"	""	"132.8"	""	"138.5"	""	"182.8"	""	"192.6"	"196.7"	""	"403"	"17"	"33.000"	"26.000"	"0.438808519129162"	"17"	"0"	"2.145E-05"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQIPGKPEIVNPASELTANVPNK"	"[R].vYQIPGkPEIVNPASELTANVPNk.[V]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"817.22412"	"3265.87465"	"3265.87632"	"-0.51"	"-0.00042"	"8/244"	"8"	"244"	"3135902.85809326"	"HCD"	"MS2"	"10.25498"	"72.2"	"100.000"	"64.0290"	"20598"	"20598"	"20579"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"108.1"	""	"91.1"	""	"84.9"	""	"119.1"	"2.3"	"145.7"	"133.7"	""	"398"	"4"	"32.000"	"25.000"	"8.05106024477912"	"13"	"0.0001859"	"0.0003515"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQIPGKPEIVNPASELTANVPNK"	"[R].vYQIPGkPEIVNPASELTANVPNk.[V]"	"N-Term(TMT6plex); K7(TMT6plex); K24(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"4"	"4"	"0.9583"	"0.0000"	"1"	"1"	"1"	"817.22479"	"3265.87734"	"3265.87632"	"0.31"	"0.00025"	"16/244"	"16"	"244"	"1407046.08947754"	"HCD"	"MS2"	"6.14514"	"35.6"	"100.000"	"64.1415"	"20591"	"20591"	"20569"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"48.4"	""	"46.6"	""	"49.9"	""	"57.8"	""	"68.4"	"69.2"	""	"378"	"24"	"32.000"	"25.000"	"0.0828823018794723"	"15"	"0"	"9.729E-06"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPADLHNLAPGTHPPFLTFNGDVK"	"[R].kPADLHNLAPGTHPPFLTFNGDVk.[T]"	"N-Term(TMT6plex); K1(TMT6plex); K24(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"5"	"5"	"0.8966"	"0.0000"	"1"	"1"	"1"	"655.57312"	"3273.83649"	"3273.83513"	"0.42"	"0.00027"	"6/266"	"6"	"266"	"8347169.27941895"	"HCD"	"MS2"	"2.128841"	"154.0"	"100.000"	"51.3433"	"15387"	"15387"	"15362"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"209.7"	""	"197.4"	""	"179.3"	""	"284.2"	""	"294.2"	"296.5"	""	"716"	"29"	"35.000"	"28.000"	"0.0478501194923627"	"17"	"0"	"6.748E-06"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"WILQVIFSVTVLCQKLMQVVPQET"	"[].wILQVIFSVTVLcQkLmQVVPQET.[]"	"N-Term(TMT6plex); C13(Methylthio); K15(TMT6plex); M17(Oxidation)"	"0"	"0"	""	""	""	""	"1"	"6"	"6"	""	"0.0000"	"2"	"2"	"4"	"554.63879"	"3322.79638"	"3322.83814"	"-12.57"	"-0.00696"	"2/252"	"2"	"252"	"402018.512817383"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"83.1773"	"28392"	"28392"	"28365"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"8.6"	""	"6.8"	""	"9.2"	""	"12.5"	""	"10.9"	"12.6"	""	"1253"	"1"	"37.000"	"30.000"	"54.8177335179989"	"13"	"0.005102"	"0.1551"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGIVMDSGDGVTHTVPIYEGYALPHAILR"	"[R].tTGIVMDSGDGVTHTVPIYEGYALPHAILR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.95001"	"3412.77822"	"3412.77724"	"0.29"	"0.00024"	"22/270"	"22"	"270"	"2854367.53149414"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"63.4019"	"20342"	"20342"	"20323"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"43.3"	""	"29.7"	""	"30.9"	""	"29.3"	""	"49.7"	"28.9"	""	"1462"	"59"	"38.000"	"31.000"	"8.31605545936929E-05"	"16"	"0"	"2.567E-08"	"1.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGIVMDSGDGVTHTVPIYEGYALPHAILR"	"[R].tTGIVMDSGDGVTHTVPIYEGYALPHAILR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.95007"	"3412.77846"	"3412.77724"	"0.36"	"0.00031"	"22/270"	"22"	"270"	"2673263.49108887"	"HCD"	"MS2"	"3.754067"	"18.8"	"100.000"	"63.3553"	"20270"	"20270"	"20249"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"27.6"	""	"28.9"	""	"30.0"	""	"21.5"	"1.0"	"36.3"	"32.6"	""	"1463"	"70"	"38.000"	"31.000"	"7.91068935374442E-06"	"17"	"0"	"2.481E-08"	"1.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPAAGLSAAAVPPAAAAPLLDFSSDSVPPAPR"	"[R].kPAAGLSAAAVPPAAAAPLLDFSSDSVPPAPR.[G]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"868.48944"	"3470.93593"	"3470.94116"	"-1.51"	"-0.00131"	"19/348"	"19"	"348"	"595134.310546875"	"HCD"	"MS2"	"17.20979"	"13.4"	"100.000"	"70.2448"	"23127"	"23127"	"23098"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"18.0"	""	"23.3"	""	"20.7"	""	"16.5"	""	"24.8"	"24.9"	""	"682"	"44"	"35.000"	"28.000"	"0.00149883690864298"	"15"	"0"	"8.91E-06"	"1.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIADLAGNPEVILPVPAFNVINGGSHAGNK"	"[R].hIADLAGNPEVILPVPAFNVInGGSHAGNk.[L]"	"N-Term(TMT6plex); N22(Deamidated); K30(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"4"	"4"	"0.2750"	"0.0000"	"1"	"1"	"1"	"870.96729"	"3480.84731"	"3480.90036"	"-15.24"	"-0.01326"	"19/318"	"19"	"318"	"2053876.88354492"	"HCD"	"MS2"	"23.90326"	"26.7"	"100.000"	"70.6572"	"23243"	"23243"	"23219"	"20190226_COPD_TMTPOOLED_F6-02.raw"	"F12"	"47.3"	""	"40.6"	""	"41.2"	""	"40.3"	"1.3"	"40.9"	"40.2"	""	"1285"	"40"	"38.000"	"31.000"	"0.00646953597237284"	"15"	"0"	"6.73E-07"	"1.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIADLAGNPEVILPVPAFNVINGGSHAGNK"	"[R].hIADLAGNPEVILPVPAFNVInGGSHAGNk.[L]"	"N-Term(TMT6plex); N22(Deamidated); K30(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"4"	"4"	"0.2895"	"0.0000"	"1"	"1"	"1"	"870.98206"	"3480.90639"	"3480.90036"	"1.73"	"0.00151"	"19/318"	"19"	"318"	"250696.14666748"	"HCD"	"MS2"	"39.85524"	"8.6"	"100.000"	"71.1904"	"23513"	"23513"	"23482"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"15.9"	""	"12.2"	""	"10.2"	""	"11.4"	""	"18.2"	"13.8"	""	"843"	"38"	"36.000"	"29.000"	"0.00719113726964816"	"18"	"0"	"9.29E-06"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIADLAGNPEVILPVPAFNVINGGSHAGNK"	"[R].hIADLAGNPEVILPVPAFNVInGGSHAGNk.[L]"	"N-Term(TMT6plex); N22(Deamidated); K30(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"4"	"4"	"0.3171"	"0.0000"	"1"	"1"	"1"	"870.98291"	"3480.90981"	"3480.90036"	"2.72"	"0.00236"	"20/318"	"20"	"318"	"2334125.86114502"	"HCD"	"MS2"	"15.78358"	"34.5"	"100.000"	"70.5450"	"23249"	"23249"	"23226"	"20190226_COPD_TMTPOOLED_F6-01.raw"	"F11"	"55.0"	""	"53.0"	""	"50.8"	""	"59.1"	"0.0"	"54.3"	"54.1"	""	"813"	"41"	"36.000"	"29.000"	"0.00358971979520145"	"15"	"0"	"6.294E-07"	"1.457"